Gene Regulatory Evolution During Speciation in a Songbird

Supplemental Material for Davidson and Balakrishnan, 2016

Files in this Data Supplement:

  • File S1 - Differential expression statistics from the comparison of Australian and Timor Zebra Finches in DE-Seq2. (.xlsx, 2 MB)
  • File S2 - Gene Ontology (GO) and Kyoto Encylopedia of Genes and Genomes (KEGG) enrichment analysis of differentially expression genes between Australian and Timor Zebra Finches. (.xlsx, 139 KB)
  • File S3 - Sample code used to generate a masked reference genome. This procedure identifies fixed differences between subspecies and masks those sites in the genome. This new masked reference genome is used in downstream analyses to avoid potential mapping bias. (.txt, 6 KB)