Table 4. 14 synonymous SNPs that are specific to branch 0
|
Gene |
SNP |
Codon* |
Change† |
||||
|
Name |
Orientation‡ |
Position (CO92) |
Name |
Position in ORF |
CO92 |
IP32953 |
|
|
YPO0256 |
- |
255684-258503 |
s81 |
1164 |
AAG |
AAA |
T |
|
YPO0462 |
- |
488896-489672 |
s92 |
726 |
GCA |
GCG |
T |
|
YPO0835 |
+ |
915224-916012 |
s90 |
102 |
CCT |
CCA |
V |
|
YPO0898 |
+ |
983357-984349 |
s91 |
495 |
GTA |
GTG |
T |
|
YPO1291 |
+ |
1449944-1451497 |
s85 |
405 |
GGT |
GGC |
T |
|
YPO1372 |
- |
1540073-1541797 |
s84 |
1044 |
TAT |
TAC |
V |
|
YPO1574 |
+ |
1795901-1796596 |
s86 |
144 |
GAT |
GAC |
T |
|
YPO1581 |
- |
1803563-1805689 |
s80 |
1131 |
GAG |
GAA |
T |
|
YPO2420 |
- |
2719869-2721872 |
s87 |
45 |
GGG |
GGT |
V |
|
YPO2676 |
- |
3002244-3002648 |
s88 |
207 |
GGC |
GGT |
T |
|
YPO2875 |
- |
3209939-3211426 |
s89 |
1326 |
TAT |
TAC |
T |
|
YPO3120 |
- |
3477960-3478565 |
s83 |
342 |
CCT |
CCG |
V |
|
YPO3268 |
+ |
3639538-3641073 |
s82 |
336 |
GGT |
GGG |
V |
|
YPO4066 |
- |
4585387-4585941 |
s93 |
381 |
TTA |
TTG |
T |
*
CO92: 1.ORI; IP32953: Y. pseudotuberculosis.†
T, transition. V, transversion.‡
Orientation relative to gene order of the CO92 genome.