BLASTP 2.3.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Stephen F. Altschul, John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. RID: 7NRMSJ41014 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 77,704,984 sequences; 28,292,933,896 total letters Query= gi|339061603|gb|AEJ34907.1| hypothetical protein MIMI_R661 [Acanthamoeba polyphaga mimivirus] Length=218 Score E Sequences producing significant alignments: (Bits) Value ref|YP_003987182.1| hypothetical protein [Acanthamoeba polyph... 433 7e-152 gb|AHA45179.1| hypothetical protein HIRU_S273 [Hirudovirus st... 420 8e-147 gb|AKI79442.1| hypothetical protein [Acanthamoeba polyphaga m... 419 3e-146 gb|AEQ60865.1| hypothetical protein [Acanthamoeba castellanii... 415 6e-145 gb|AKI80398.1| hypothetical protein [Acanthamoeba polyphaga m... 334 6e-113 gb|EJN41075.1| hypothetical protein lvs_R572 [Acanthamoeba po... 223 6e-71 gb|KPI38054.1| hypothetical protein AB675_1021 [Phialophora a... 45.8 0.018 gb|ETN62591.1| zinc finger protein 224 [Anopheles darlingi] 41.6 0.55 ref|YP_007418881.1| hypothetical protein LBA_00987 [Megavirus... 39.3 2.0 ref|XP_001639851.1| predicted protein [Nematostella vectensis] 39.3 3.4 ref|XP_008922906.1| PREDICTED: extracellular matrix protein F... 38.5 5.3 ref|XP_002009702.1| GI15504 [Drosophila mojavensis] 37.4 9.9 ALIGNMENTS >ref|YP_003987182.1| hypothetical protein [Acanthamoeba polyphaga mimivirus] sp|Q5UQ61.1|YR661_MIMIV RecName: Full=Uncharacterized protein R661 [Acanthamoeba polyphaga mimivirus] gb|AAV50922.1| unknown [Acanthamoeba polyphaga mimivirus] gb|ADO18781.1| hypothetical protein [Acanthamoeba polyphaga mimivirus] gb|AEJ34907.1| hypothetical protein MIMI_R661 [Acanthamoeba polyphaga mimivirus] Length=218 Score = 433 bits (1113), Expect = 7e-152, Method: Compositional matrix adjust. Identities = 218/218 (100%), Positives = 218/218 (100%), Gaps = 0/218 (0%) Query 1 MVIYNILMDLRIVKNENCTDDLDYQSHTNNVHNEFLKNIMCQDCFKTKNNCLCKNIHECK 60 MVIYNILMDLRIVKNENCTDDLDYQSHTNNVHNEFLKNIMCQDCFKTKNNCLCKNIHECK Sbjct 1 MVIYNILMDLRIVKNENCTDDLDYQSHTNNVHNEFLKNIMCQDCFKTKNNCLCKNIHECK 60 Query 61 TIKPRKICEYCNEiyikkkiikgknsiqikWQCPKSHQSGSHCKKCMSQLINGECRNYDC 120 TIKPRKICEYCNEIYIKKKIIKGKNSIQIKWQCPKSHQSGSHCKKCMSQLINGECRNYDC Sbjct 61 TIKPRKICEYCNEIYIKKKIIKGKNSIQIKWQCPKSHQSGSHCKKCMSQLINGECRNYDC 120 Query 121 NCGKDGSCCQICGLMYKYGKCINGHDDSNKCDYCGMIYVDGVYLCGHNGDICEECVLLKE 180 NCGKDGSCCQICGLMYKYGKCINGHDDSNKCDYCGMIYVDGVYLCGHNGDICEECVLLKE Sbjct 121 NCGKDGSCCQICGLMYKYGKCINGHDDSNKCDYCGMIYVDGVYLCGHNGDICEECVLLKE 180 Query 181 HGFCPLVDEHNKCSGEISTNYFNDNYDEMDITIHDYLI 218 HGFCPLVDEHNKCSGEISTNYFNDNYDEMDITIHDYLI Sbjct 181 HGFCPLVDEHNKCSGEISTNYFNDNYDEMDITIHDYLI 218 >gb|AHA45179.1| hypothetical protein HIRU_S273 [Hirudovirus strain Sangsue] gb|AKI81335.1| hypothetical protein [Acanthamoeba polyphaga mimivirus] Length=211 Score = 420 bits (1079), Expect = 8e-147, Method: Compositional matrix adjust. Identities = 211/211 (100%), Positives = 211/211 (100%), Gaps = 0/211 (0%) Query 8 MDLRIVKNENCTDDLDYQSHTNNVHNEFLKNIMCQDCFKTKNNCLCKNIHECKTIKPRKI 67 MDLRIVKNENCTDDLDYQSHTNNVHNEFLKNIMCQDCFKTKNNCLCKNIHECKTIKPRKI Sbjct 1 MDLRIVKNENCTDDLDYQSHTNNVHNEFLKNIMCQDCFKTKNNCLCKNIHECKTIKPRKI 60 Query 68 CEYCNEiyikkkiikgknsiqikWQCPKSHQSGSHCKKCMSQLINGECRNYDCNCGKDGS 127 CEYCNEIYIKKKIIKGKNSIQIKWQCPKSHQSGSHCKKCMSQLINGECRNYDCNCGKDGS Sbjct 61 CEYCNEIYIKKKIIKGKNSIQIKWQCPKSHQSGSHCKKCMSQLINGECRNYDCNCGKDGS 120 Query 128 CCQICGLMYKYGKCINGHDDSNKCDYCGMIYVDGVYLCGHNGDICEECVLLKEHGFCPLV 187 CCQICGLMYKYGKCINGHDDSNKCDYCGMIYVDGVYLCGHNGDICEECVLLKEHGFCPLV Sbjct 121 CCQICGLMYKYGKCINGHDDSNKCDYCGMIYVDGVYLCGHNGDICEECVLLKEHGFCPLV 180 Query 188 DEHNKCSGEISTNYFNDNYDEMDITIHDYLI 218 DEHNKCSGEISTNYFNDNYDEMDITIHDYLI Sbjct 181 DEHNKCSGEISTNYFNDNYDEMDITIHDYLI 211 >gb|AKI79442.1| hypothetical protein [Acanthamoeba polyphaga mimivirus] Length=211 Score = 419 bits (1076), Expect = 3e-146, Method: Compositional matrix adjust. Identities = 210/211 (99%), Positives = 210/211 (99%), Gaps = 0/211 (0%) Query 8 MDLRIVKNENCTDDLDYQSHTNNVHNEFLKNIMCQDCFKTKNNCLCKNIHECKTIKPRKI 67 MDLRIVKNENCTDDLDYQSHTNN HNEFLKNIMCQDCFKTKNNCLCKNIHECKTIKPRKI Sbjct 1 MDLRIVKNENCTDDLDYQSHTNNAHNEFLKNIMCQDCFKTKNNCLCKNIHECKTIKPRKI 60 Query 68 CEYCNEiyikkkiikgknsiqikWQCPKSHQSGSHCKKCMSQLINGECRNYDCNCGKDGS 127 CEYCNEIYIKKKIIKGKNSIQIKWQCPKSHQSGSHCKKCMSQLINGECRNYDCNCGKDGS Sbjct 61 CEYCNEIYIKKKIIKGKNSIQIKWQCPKSHQSGSHCKKCMSQLINGECRNYDCNCGKDGS 120 Query 128 CCQICGLMYKYGKCINGHDDSNKCDYCGMIYVDGVYLCGHNGDICEECVLLKEHGFCPLV 187 CCQICGLMYKYGKCINGHDDSNKCDYCGMIYVDGVYLCGHNGDICEECVLLKEHGFCPLV Sbjct 121 CCQICGLMYKYGKCINGHDDSNKCDYCGMIYVDGVYLCGHNGDICEECVLLKEHGFCPLV 180 Query 188 DEHNKCSGEISTNYFNDNYDEMDITIHDYLI 218 DEHNKCSGEISTNYFNDNYDEMDITIHDYLI Sbjct 181 DEHNKCSGEISTNYFNDNYDEMDITIHDYLI 211 >gb|AEQ60865.1| hypothetical protein [Acanthamoeba castellanii mamavirus] Length=211 Score = 415 bits (1067), Expect = 6e-145, Method: Compositional matrix adjust. Identities = 207/211 (98%), Positives = 209/211 (99%), Gaps = 0/211 (0%) Query 8 MDLRIVKNENCTDDLDYQSHTNNVHNEFLKNIMCQDCFKTKNNCLCKNIHECKTIKPRKI 67 MDLRIVKNENCTDDLDYQSHTNN HNEFLKNIMCQDCFKTKNNCLCKNIHECKTIKPRKI Sbjct 1 MDLRIVKNENCTDDLDYQSHTNNAHNEFLKNIMCQDCFKTKNNCLCKNIHECKTIKPRKI 60 Query 68 CEYCNEiyikkkiikgknsiqikWQCPKSHQSGSHCKKCMSQLINGECRNYDCNCGKDGS 127 CE+CNEIYIKKKIIKGKNSIQIKWQCPKSHQSGSHCKKCMSQLINGECRNYDCNCGKDGS Sbjct 61 CEHCNEIYIKKKIIKGKNSIQIKWQCPKSHQSGSHCKKCMSQLINGECRNYDCNCGKDGS 120 Query 128 CCQICGLMYKYGKCINGHDDSNKCDYCGMIYVDGVYLCGHNGDICEECVLLKEHGFCPLV 187 CCQICGLMYKYGKCINGHDDSNKCDYCGMIYVDG YLCGHNGDICEEC+LLKEHGFCPLV Sbjct 121 CCQICGLMYKYGKCINGHDDSNKCDYCGMIYVDGAYLCGHNGDICEECILLKEHGFCPLV 180 Query 188 DEHNKCSGEISTNYFNDNYDEMDITIHDYLI 218 DEHNKCSGEISTNYFNDNYDEMDITIHDYLI Sbjct 181 DEHNKCSGEISTNYFNDNYDEMDITIHDYLI 211 >gb|AKI80398.1| hypothetical protein [Acanthamoeba polyphaga mimivirus] Length=219 Score = 334 bits (857), Expect = 6e-113, Method: Compositional matrix adjust. Identities = 183/219 (84%), Positives = 198/219 (90%), Gaps = 8/219 (4%) Query 8 MDLRIVKNENCTDDLDYQSHTNNVHNEFLKNIMCQDCFKTKNNCLCKNIHECKTIKPRKI 67 MDL IVKNENC D+LDYQSHTNN HNEFLKNIMCQDCFKTKNNCLCKNIH+ K IK RKI Sbjct 1 MDLHIVKNENCGDNLDYQSHTNNTHNEFLKNIMCQDCFKTKNNCLCKNIHKSKIIKFRKI 60 Query 68 CEYCNEiyikkkiikgknsiqikWQCPKSHQSGSHCKKCMSQLINGECRNYDCNCGKDGS 127 CEYCNEIYIKKKIIKG+NSIQIKWQCPKSHQSGSHCKKC SQL+NGEC NYDCN GK+GS Sbjct 61 CEYCNEIYIKKKIIKGENSIQIKWQCPKSHQSGSHCKKCKSQLMNGECHNYDCNYGKNGS 120 Query 128 CCQICGLMYKYGKCINGHDDSNKCDYCGMIYVDGVYLCGHNGDICEECVLLKEHGFCPLV 187 CCQICGLMYKYGKCINGHDDSNKCDYCGMIY+DG YLCGHNGDICEECVLLKE+GFCPLV Sbjct 121 CCQICGLMYKYGKCINGHDDSNKCDYCGMIYLDGAYLCGHNGDICEECVLLKEYGFCPLV 180 Query 188 DEHNKCSGEISTNYFN--------DNYDEMDITIHDYLI 218 EHNKCS +IST+YFN ++YDEMD+T +D+L+ Sbjct 181 HEHNKCSRKISTHYFNHCDDYDDYNDYDEMDVTNYDFLV 219 >gb|EJN41075.1| hypothetical protein lvs_R572 [Acanthamoeba polyphaga lentillevirus] Length=112 Score = 223 bits (569), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 110/112 (98%), Positives = 111/112 (99%), Gaps = 0/112 (0%) Query 107 MSQLINGECRNYDCNCGKDGSCCQICGLMYKYGKCINGHDDSNKCDYCGMIYVDGVYLCG 166 MSQLINGECRNYDCNCGKDGSCCQICGLMYKYGKCINGHDDSNKCDYCGMIYVDG YLCG Sbjct 1 MSQLINGECRNYDCNCGKDGSCCQICGLMYKYGKCINGHDDSNKCDYCGMIYVDGAYLCG 60 Query 167 HNGDICEECVLLKEHGFCPLVDEHNKCSGEISTNYFNDNYDEMDITIHDYLI 218 HNGDICEEC+LLKEHGFCPLVDEHNKCSGEISTNYFNDNYDEMDITIHDYLI Sbjct 61 HNGDICEECILLKEHGFCPLVDEHNKCSGEISTNYFNDNYDEMDITIHDYLI 112 >gb|KPI38054.1| hypothetical protein AB675_1021 [Phialophora attae] Length=655 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 55/207 (27%), Positives = 80/207 (39%), Gaps = 49/207 (24%) Query 21 DLDYQSHTNN------VHNEFLKNIMCQDCFKTKNNCLCKNIHE--CKTIKPRKICEYCN 72 DLDY S + H F+ I+ DC ++ C+ ++ C+ PR C C Sbjct 84 DLDYVSDYDPHLMCPICHVPFVDPIVL-DC----DHTFCRQCYDEYCREPDPRVQCPTCR 138 Query 73 Eiyikkkiikgknsi-----qikWQCPKSHQSGSHCKKCMSQLINGECRNY--DC---NC 122 YI + + I +K +CP H + M + ECR Y DC NC Sbjct 139 A-YILGRPQRASRLIVNMCDDVKVRCPNDDCEAVHARGYMERHAIKECREYPMDCPGRNC 197 Query 123 GK--------DGSCCQI------CGLMYKYGKC-INGHDDSN------KCDYCGMIYVDG 161 K DG+C CG + + G+ H D + KC+ CG Sbjct 198 DKKVKRKNFIDGTCIHSSHIECDCGAVIELGRGEWLKHKDEDCPATGVKCEACGERITVK 257 Query 162 VYLCGHNGDICEECVLLKEHGFCPLVD 188 YL G NG IC+ + +CP V+ Sbjct 258 AYLAGQNGHICQANIT----SYCPGVE 280 >gb|ETN62591.1| zinc finger protein 224 [Anopheles darlingi] Length=525 Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 27/164 (16%) Query 25 QSHTNNVHNEFLKNIMCQDC-----FKTKNNCLCKNIHECKTIKPRKICEYCNEiyikkk 79 + H N H E + C C F+T+ N + +H K I ICE CN+ + K Sbjct 293 EEHMQNKHQE--RTFCCDTCGKRFPFQTRLNAHVRKMHTVKDI----ICEQCNKAFSKYT 346 Query 80 iikgknsiq----ikWQCPKSHQSGSHCKKCMSQLINGECRNYDCNCGKDGSCCQICGLM 135 I K S+ I CP+S +S + M E R + + C ICG++ Sbjct 347 IEDHKRSVHGTGFICEHCPRSFKSRFQLENHME-----EHRVDESGVRPAKATCTICGIV 401 Query 136 YK-------YGKCINGHDDSNKCDYCGMIYVDGVYLCGHNGDIC 172 + + K ++ +C+ CG ++ L H ++C Sbjct 402 VRNKYNLTTHMKRMHTEQKPARCESCGKVFKSKHNLDAHRANVC 445 >ref|YP_007418881.1| hypothetical protein LBA_00987 [Megavirus lba] gb|AGD92905.1| hypothetical protein LBA_00987 [Megavirus lba] Length=294 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 30/94 (32%), Positives = 43/94 (46%), Gaps = 4/94 (4%) Query 115 CRNYDCNCGKDGSCCQICGLMYKYGKCINGHDDSNKCDYCGMIYVDGVYLCGHNGDICEE 174 CRN C DGS C CG + + C H+ KC +CG DG GH+G C+ Sbjct 66 CRNGSCPYDHDGSKCIHCGALCRNALCPYEHN-GKKCIHCGTFLEDGFCPYGHDGTKCKH 124 Query 175 CVLLKEHGFCPLVD---EHNKCSGEISTNYFNDN 205 C +G+C E+ CS + +YF ++ Sbjct 125 CGSFHNYGYCQCKQSGGEYKTCSLDNLKDYFGNS 158 >ref|XP_001639851.1| predicted protein [Nematostella vectensis] gb|EDO47788.1| predicted protein [Nematostella vectensis] Length=5014 Score = 39.3 bits (90), Expect = 3.4, Method: Composition-based stats. Identities = 54/210 (26%), Positives = 83/210 (40%), Gaps = 28/210 (13%) Query 17 NCTDDLDYQSHTNNVHNEFLKNIMCQDCFKTKNNCL-CKNIHECKTIKPRKICEYCNEiy 75 +C D D N+ N L+ I C K N L C +C C C++ Y Sbjct 4660 DCNDHSDEDDCPNSDCN--LEQIYCPVSQKCLNRTLQCDGKPDCSDYSDEAHCRVCSDNY 4717 Query 76 ikkkiikgknsiqi-kWQCPKSHQSGSHCKKCMSQLINGECRNYDCNCGKDGSCCQICGL 134 K + S I K CP S+ +G +C+ I +C N + C + S C G+ Sbjct 4718 CKNQGACAMQSTGIRKCICPLSY-TGVYCET----KIPSDCSNDEFKCPEQPSGCAGRGI 4772 Query 135 MYKYGKCINGHDDSNKCDYCGMIYV------------DGVYLC----GHNGDICEECVLL 178 + I G+DD YCG+ Y +G C +G +C + + Sbjct 4773 LCSTQMGICGYDDDQIKRYCGVCYPGYCSRHGTCSSNNGTRTCKCSPSWSGSVCSKLNIT 4832 Query 179 KEHGFCPL-VDEHNKCSGEISTNYFNDNYD 207 G P V ++ +C E ST+ ++NYD Sbjct 4833 CPAGLIPCAVGDNGQC--ENSTSVCSNNYD 4860 >ref|XP_008922906.1| PREDICTED: extracellular matrix protein FRAS1 [Manacus vitellinus] Length=3978 Score = 38.5 bits (88), Expect = 5.3, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 61/153 (40%), Gaps = 22/153 (14%) Query 58 ECKTIKPRKICEYCNEiyikkkiikgknsiqikWQCPKSHQSGSHCKKCMSQLINGECRN 117 E + P K C C K + G+ + Q Q K+ + C + + + C Sbjct 196 EVVVLSPGKCCPECAP---KPCSVSGR-AFQHGEQWRKNACTACACHRGEVRCVRETCGP 251 Query 118 YDCNCG-----KDGSCCQICGLMYKYGKCING-----HDD---SNKCDYCGMIYVDGVYL 164 C G + G CC+ C + G C++G H D S++C +C G L Sbjct 252 VTCEEGESRVRRPGKCCEEC--VSSQGSCLDGGTLRYHGDTWNSSRCHFCACPDGGGEEL 309 Query 165 CGHNGDICEECVLLKEHGFCPLVDEHNKCSGEI 197 +G C EC+ +C + EH K SGE+ Sbjct 310 IHFDGKCCPECI--SSQSYC-VYKEHTKASGEL 339 >ref|XP_002009702.1| GI15504 [Drosophila mojavensis] gb|EDW07019.1| uncharacterized protein Dmoj_GI15504 [Drosophila mojavensis] Length=389 Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust. Identities = 25/81 (31%), Positives = 30/81 (37%), Gaps = 8/81 (10%) Query 95 KSHQSGSHCKKCMSQLINGECRNYDCNCGKDGS--CCQICGLMYKYGKCINGH------D 146 KSH C C QL Y D C ICG +K +GH + Sbjct 225 KSHNPALQCPICGKQLSTSNSFKYHMQLHGDNRPFVCSICGESFKTRNAYDGHITLHNPN 284 Query 147 DSNKCDYCGMIYVDGVYLCGH 167 + NKC +CG IY L H Sbjct 285 NPNKCTFCGKIYRQASSLRSH 305 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Dec 21, 2015 1:47 PM Number of letters in database: 28,687,121,972 Number of sequences in database: 78,568,447 Lambda K H 0.324 0.141 0.478 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 78568447 Number of Hits to DB: 11128415 Number of extensions: 12682 Number of successful extensions: 2429 Number of sequences better than 100: 60 Number of HSP's better than 100 without gapping: 0 Number of HSP's gapped: 2424 Number of HSP's successfully gapped: 62 Length of query: 218 Length of database: 28687121972 Length adjustment: 145 Effective length of query: 73 Effective length of database: 17294697157 Effective search space: 1262512892461 Effective search space used: 1262512892461 T: 21 A: 40 X1: 15 (7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 76 (33.9 bits) ka-blk-alpha gapped: 1.9 ka-blk-alpha ungapped: 0.7916 ka-blk-alpha_v gapped: 42.6028 ka-blk-alpha_v ungapped: 4.96466 ka-blk-sigma gapped: 43.6362