Supplementary table 4: transcription factor binding sites enriched in the gene-module regulated by f13 rule Transcription factor binding sites q values Arnt-MA0004.1 1.66E-05 Arnt::Ahr-MA0006.1 3.55E-07 En1-MA0027.1 3.84E-07 ELK1-MA0028.1 1.33E-06 FOXD1-MA0031.1 5.63E-05 FOXC1-MA0032.1 3.33E-16 FOXL1-MA0033.1 4.44E-16 Gfi1-MA0038.1 7.70E-11 FOXI1-MA0042.1 2.89E-07 NHLH1-MA0048.1 0.002562332 MZF1_1-4-MA0056.1 3.33E-16 MZF1_5-13-MA0057.1 4.43E-16 Nkx2-5-MA0063.1 6.02E-16 Pax2-MA0067.1 3.33E-16 RORA_1-MA0071.1 0.000107795 Prrx2-MA0075.1 5.13E-05 SOX9-MA0077.1 8.43E-05 Sox17-MA0078.1 6.44E-10 SPIB-MA0081.1 3.87E-16 SRY-MA0084.1 1.18E-05 Sox5-MA0087.1 2.22E-12 TEAD1-MA0090.1 0.015304444 Hand1::Tcfe2a-MA0092.1 1.56E-07 REL-MA0101.1 0.000384473 Zfp423-MA0116.1 0.034067906 Mafb-MA0117.1 2.92E-15 Nkx3-2-MA0122.1 3.31E-15 NKX3-1-MA0124.1 2.65E-06 Nobox-MA0125.1 1.06E-05 ZNF354C-MA0130.1 3.33E-16 Pdx1-MA0132.1 3.90E-13 BRCA1-MA0133.1 3.33E-16 ELF5-MA0136.1 1.24E-15 CTCF-MA0139.1 0.006688849 Klf4-MA0039.2 2.79E-15 RUNX1-MA0002.2 0.000107795 Foxa2-MA0047.2 0.010227699 ARID3A-MA0151.1 2.14E-13 INSM1-MA0155.1 0.001779375 NFIC-MA0161.1 3.33E-16 Nr2e3-MA0164.1 7.83E-06 Esrrb-MA0141.2 0.000380906 Zfx-MA0146.2 9.76E-09 Atoh1-MA0461.1 8.31E-14 BATF::JUN-MA0462.1 0.001640098 Bhlhe40-MA0464.1 2.08E-07 CDX2-MA0465.1 0.021411065 DUX4-MA0468.1 0.006720689 E2F3-MA0469.1 0.000121213 E2F4-MA0470.1 2.66E-05 E2F6-MA0471.1 8.53E-10 EGR2-MA0472.1 6.36E-09 Erg-MA0474.1 0.003138083 FOS-MA0476.1 4.88E-12 FOSL1-MA0477.1 3.87E-08 FOSL2-MA0478.1 1.66E-05 FOXH1-MA0479.1 0.010855784 Gata4-MA0482.1 0.000836599 JUN (var.2)-MA0489.1 0.006873165 JUNB-MA0490.1 1.44E-07 JUND-MA0491.1 1.95E-08 Klf1-MA0493.1 1.71E-10 Myod1-MA0499.1 5.59E-14 Myog-MA0500.1 2.61E-14 NFYB-MA0502.1 0.015304444 Nr5a2-MA0505.1 0.036630392 Rfx1-MA0509.1 2.70E-05 RUNX2-MA0511.1 0.014212906 Rxra-MA0512.1 8.97E-05 Sox3-MA0514.1 1.55E-06 Sox6-MA0515.1 1.11E-06 SP2-MA0516.1 1.53E-11 Stat5a::Stat5b-MA0519.1 0.030211709 Tcf12-MA0521.1 4.74E-13 Tcf3-MA0522.1 1.14E-16 TCF7L2-MA0523.1 0.027656021 TFAP2C-MA0524.1 1.32E-09 USF2-MA0526.1 0.045738942 AR-MA0007.2 0.019359773 E2F1-MA0024.2 5.92E-10 EBF1-MA0154.2 3.83E-13 EGR1-MA0162.2 3.26E-12 ESR2-MA0258.2 0.035981575 FOXA1-MA0148.3 0.010855784 Gata1-MA0035.3 0.00184028 GATA2-MA0036.2 0.026196068 GATA3-MA0037.2 8.32E-08 HNF4A-MA0114.2 0.003997362 MAX-MA0058.2 0.040552105 Myb-MA0100.2 0.035717007 Myc-MA0147.2 3.54E-08 Mycn-MA0104.3 1.49E-11 NFKB1-MA0105.3 0.003139141 Sox2-MA0143.3 2.50E-13 SP1-MA0079.3 9.60E-15 STAT3-MA0144.2 0.035359188 TFAP2A-MA0003.2 0.021316937 ZEB1-MA0103.2 2.14E-13 ESRRA-MA0592.1 0.020109637 FOXP2-MA0593.1 0.041939136 SREBF1-MA0595.1 8.27E-07 THAP1-MA0597.1 1.36E-15 EHF-MA0598.1 3.33E-16 KLF5-MA0599.1 1.72E-17 RFX2-MA0600.1 0.001285199 TFAP2A-MA0003.1 4.43E-16 E2F1-MA0024.1 4.02E-05 GATA2-MA0036.1 3.33E-16 GATA3-MA0037.1 3.33E-16 Gfi-MA0038.1 7.70E-11 MEF2A-MA0052.1 0.01017559 Myf-MA0055.1 1.88E-09 MAX-MA0058.1 0.007664977 NFYA-MA0060.1 0.015681506 NF-kappaB-MA0061.1 5.10E-05 USF1-MA0093.1 3.90E-13 YY1-MA0095.1 3.33E-16 ETS1-MA0098.1 3.33E-16 Myb-MA0100.1 1.32E-09 NFKB1-MA0105.1 0.001570489 Tal1::Gata1-MA0140.1 0.000585564 Esrrb-MA0141.1 0.000185171 Stat3-MA0144.1 0.01029179 Zfx-MA0146.1 2.50E-08 FOXA1-MA0148.1 2.14E-05 Gata1-MA0035.2 4.96E-05 STAT1-MA0137.2 0.011025451 Mycn-MA0104.2 0.017214008 NFATC2-MA0152.1 2.66E-15 EBF1-MA0154.1 6.51E-11 FEV-MA0156.1 5.59E-14 FOXO3-MA0157.1 2.65E-06 HOXA5-MA0158.1 5.13E-11 NR4A2-MA0160.1 6.43E-09 Egr1-MA0162.1 1.52E-05 SPI1-MA0080.2 6.69E-16 CREB1-MA0018.2 0.000109181 AP1-MA0099.2 1.30E-14 SP1-MA0079.2 9.64E-18 HIF1A::ARNT-MA0259.1 1.04E-09 SOX10-MA0442.1 3.33E-16