{"text_format":"3","workbook":"xlsb","n_sheets":5,"sheets":["1_genomic_localization_Dnm","2_promoters bound by Dnmt3a","3_enhancers not bound","4_promoters not bound by Dnmt3a","5_enhancers bound by Dnmt3a"],"read":"bin_record_odd","date_system":"1904","formulas":"cached_only","passed_over":{"ids":[37,38,1024],"n":0}}

{"sheet":"1_genomic_localization_Dnm","index":0,"n_rows":364,"n_cols":19,"rows_kept":364,"read":"bin_record_odd","flags":["formulas_cached_only"]}
["PeakID (cmd=annotatePeaks.pl Dnmt3a_back_u_K27ac_WT_back_enhancers.bed mm10)","Chr","Start","End","Strand","Peak Score","Focus Ratio/Region Size","Annotation","Detailed Annotation","Distance to TSS","Nearest PromoterID","Entrez ID","Nearest Unigene","Nearest Refseq","Nearest Ensembl","Gene Name","Gene Alias","Gene Description","Gene Type"]
["MACS_peak_68162","chr15",85669713,85672080,"+",1004.83,"NA","Intergenic","CpG",-32877,"NR_110483",102800312,"Mm.33117","NR_110483",null,"Lincppara","Mirlet7bhg|linc-Ppara","long intergenic noncoding RNA near Ppara","ncRNA"]
["MACS_peak_148979","chr5",113136990,113139238,"+",910.41,"NA","intron (NM_172884, intron 1 of 7)","CpG",25199,"NM_172884",243219,"Mm.160131","NM_172884","ENSMUSG00000051339","2900026A02Rik","8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671","RIKEN cDNA 2900026A02 gene","protein-coding"]
["MACS_peak_161240","chr6",67534643,67536157,"+",724.82,"NA","exon (NM_020047, exon 1 of 1)","exon (NM_020047, exon 1 of 1)",422,"NM_020047",56753,"Mm.439913","NM_020047","ENSMUSG00000051397","Tacstd2","C80403|EGP-1|GA733-1|Ly97|TROP2","tumor-associated calcium signal transducer 2","protein-coding"]
["MACS_peak_129599","chr4",108779911,108780929,"+",573.18,"NA","intron (NM_001254730, intron 3 of 3)","CpG",53164,"NM_027453",70533,"Mm.379178","NM_027453","ENSMUSG00000028568","Btf3l4","4632412E09Rik|5730434I03Rik|AI316863|AU022207|AW552446","basic transcription factor 3-like 4","protein-coding"]
["MACS_peak_71199","chr15",101976560,101977902,"+",570.05,"NA","Intergenic","Intergenic",-22944,"NM_212487",332131,"Mm.325105","NM_212487","ENSMUSG00000050463","Krt78","2310030B04Rik|Kb40","keratin 78","protein-coding"]
["MACS_peak_120592","chr3",87905941,87906959,"+",569.56,"NA","5' UTR (NM_008231, exon 1 of 6)","5' UTR (NM_008231, exon 1 of 6)",129,"NM_008231",15191,"Mm.292208","NM_008231","ENSMUSG00000004897","Hdgf","AI118077|D3Ertd299e","hepatoma-derived growth factor","protein-coding"]
["MACS_peak_188520","chr8",84200667,84201905,"+",560.81,"NA","Intergenic","Intergenic",-7232,"NR_029740",387216,null,"NR_029740","ENSMUSG00000065611","Mir23a","Mirn23a|mir-23a|mmu-mir-23a","microRNA 23a","ncRNA"]
["MACS_peak_32720","chr11",100396803,100398044,"+",558.59,"NA","promoter-TSS (NR_132425)","promoter-TSS (NR_132425)",367,"NM_010593",16480,"Mm.299774","NM_010593","ENSMUSG00000001552","Jup","Ctnng|D930025P04Rik|PG","junction plakoglobin","protein-coding"]
["MACS_peak_205602","chr9",107906700,107907872,"+",528.66,"NA","exon (NM_009074, exon 1 of 19)","exon (NM_009074, exon 1 of 19)",397,"NR_109782",19882,"Mm.3901","NM_009074","ENSMUSG00000032584","Mst1r","CD136|CDw136|Fv-2|Fv2|PTK8|Ron|STK","macrophage stimulating 1 receptor (c-met-related tyrosine kinase)","protein-coding"]
["MACS_peak_28489","chr11",77762997,77764451,"+",519.31,"NA","Intergenic","Intergenic",-13511,"NM_001291213",360013,"Mm.341248","NM_011586","ENSMUSG00000000631","Myo18a","MAJN|MyoPDZ|MysPDZ","myosin XVIIIA","protein-coding"]
["MACS_peak_17751","chr10",81412806,81414280,"+",512.65,"NA","intron (NM_026756, intron 2 of 8)","intron (NM_026756, intron 2 of 8)",2754,"NR_106141",102465778,null,"NR_106141","ENSMUSG00000105379","Mir1191b","mmu-mir-1191b","microRNA 1191b","ncRNA"]
["MACS_peak_202598","chr9",66511423,66512740,"+",490.5,"NA","intron (NM_175206, intron 1 of 1)","intron (NM_175206, intron 1 of 1)",2512,"NM_175206",74165,"Mm.297998","NM_175206","ENSMUSG00000050503","Fbxl22","1110004B15Rik","F-box and leucine-rich repeat protein 22","protein-coding"]
["MACS_peak_62457","chr15",38470210,38471468,"+",490.27,"NA","Intergenic","CpG",19708,"NR_105916",102465574,null,"NR_105916","ENSMUSG00000099110","Mir6951","Gm27765|mmu-mir-6951","microRNA 6951","ncRNA"]
["MACS_peak_165267","chr6",114968577,114970024,"+",477.94,"NA","Intergenic","CpG",-47548,"NM_177683",232334,"Mm.268357","NM_177683",null,"Vgll4","BC048841|VGL-4","vestigial like 4 (Drosophila)","protein-coding"]
["MACS_peak_157168","chr5",142821256,142822081,"+",467.36,"NA","Intergenic","Intergenic",-4281,"NM_001122730",231861,"Mm.354649","NM_178242","ENSMUSG00000039477","Tnrc18","BC025631|EG381742|Zfp469","trinucleotide repeat containing 18","protein-coding"]
["MACS_peak_139338","chr4",150060943,150062051,"+",465.31,"NA","Intergenic","Intergenic",-6957,"NR_029751",723848,null,"NR_029751","ENSMUSG00000065493","Mir34a","Mirn34a|mir-34a|mmu-mir-34a","microRNA 34a","ncRNA"]
["MACS_peak_134104","chr4",133813396,133814212,"+",463.6,"NA","Intergenic","CpG",-60193,"NM_001080819",93760,"Mm.22478","NM_001080819","ENSMUSG00000007880","Arid1a","1110030E03Rik|BAF250a|Osa1|Smarcf1","AT rich interactive domain 1A (SWI-like)","protein-coding"]
["MACS_peak_50042","chr13",48545823,48546907,"+",456.93,"NA","Intergenic","CpG",-8093,"NR_029725",387244,null,"NR_029725","ENSMUSG00000065421","Mirlet7a-1","Let-7a|Mirnlet7a|Mirnlet7a-1|let-7a-1","microRNA let7a-1","ncRNA"]
["MACS_peak_134043","chr4",133599439,133600538,"+",456.58,"NA","TTS (NM_018754)","TTS (NM_018754)",2180,"NM_018754",55948,"Mm.44482","NM_018754","ENSMUSG00000047281","Sfn","Er|Mme1|Ywhas","stratifin","protein-coding"]
["MACS_peak_3411","chr1",86442143,86443260,"+",435.9,"NA","Intergenic","CpG",16372,"NM_027966",71863,"Mm.179627","NM_027966","ENSMUSG00000036574","1700019O17Rik","-","RIKEN cDNA 1700019O17 gene","protein-coding"]
["MACS_peak_115230","chr2",167777293,167778066,"+",428.14,"NA","Intergenic","CpG",86502,"NR_015500",329562,"Mm.123101","NM_177851","ENSMUSG00000006462","A530013C23Rik","-","RIKEN cDNA A530013C23 gene","ncRNA"]
["MACS_peak_80432","chr17",27037731,27038672,"+",425.69,"NA","Intergenic","Intergenic",8942,"NM_027544",70772,"Mm.440437","NM_027544","ENSMUSG00000048731","Ggnbp1","0610031G08Rik|mdf","gametogenetin binding protein 1","protein-coding"]
["MACS_peak_99232","chr19",53313024,53313976,"+",414.99,"NA","intron (NM_001008542, intron 1 of 5)","CpG",2994,"NM_001008542",17859,"Mm.2154","NM_010847","ENSMUSG00000025025","Mxi1","ENSMUSG00000067085|Gm10197|Mad2|bHLHc11","MAX interactor 1, dimerization protein","protein-coding"]
["MACS_peak_11000","chr1",191224291,191225299,"+",411.37,"NA","Intergenic","CpG",-41462,"NM_007498",11910,"Mm.2706","NM_007498","ENSMUSG00000026628","Atf3","LRG-21","activating transcription factor 3","protein-coding"]
["MACS_peak_69028","chr15",89180175,89181325,"+",408.48,"NA","promoter-TSS (NM_138749)","promoter-TSS (NM_138749)",38,"NM_001284506",140570,"Mm.267514","NM_138749","ENSMUSG00000036606","Plxnb2","Debt|plexin-B2","plexin B2","protein-coding"]
["MACS_peak_41256","chr12",52503962,52505055,"+",408.45,"NA","Intergenic","CpG",-11569,"NM_009706",11855,"Mm.35059","NM_009706","ENSMUSG00000035133","Arhgap5","p190-B|p190B","Rho GTPase activating protein 5","protein-coding"]
["MACS_peak_3425","chr1",86503852,86504785,"+",396.97,"NA","Intergenic","CpG",-22418,"NM_008972",19231,"Mm.19187","NM_008972","ENSMUSG00000026238","Ptma","Thym","prothymosin alpha","protein-coding"]
["MACS_peak_103692","chr2",30928967,30930174,"+",396.46,"NA","Intergenic","Intergenic",-23431,"NM_133673",30934,"Mm.249164","NM_133673","ENSMUSG00000026848","Tor1b","2610016F05Rik|DQ1|torsinB","torsin family 1, member B","protein-coding"]
["MACS_peak_134049","chr4",133604999,133606614,"+",394.6,"NA","Intergenic","Intergenic",-3638,"NM_018754",55948,"Mm.44482","NM_018754","ENSMUSG00000047281","Sfn","Er|Mme1|Ywhas","stratifin","protein-coding"]
["MACS_peak_115180","chr2",167721373,167722264,"+",392.18,"NA","Intergenic","Intergenic",30641,"NR_015500",329562,"Mm.123101","NM_177851","ENSMUSG00000006462","A530013C23Rik","-","RIKEN cDNA A530013C23 gene","ncRNA"]
["MACS_peak_115241","chr2",167789289,167790277,"+",390.08,"NA","Intergenic","Intergenic",98606,"NR_015500",329562,"Mm.123101","NM_177851","ENSMUSG00000006462","A530013C23Rik","-","RIKEN cDNA A530013C23 gene","ncRNA"]
["MACS_peak_81257","chr17",28259219,28260416,"+",388.83,"NA","intron (NM_011145, intron 2 of 7)","intron (NM_011145, intron 2 of 7)",-11891,"NR_045427",69050,"Mm.486938","NR_045427","ENSMUSG00000002250","1810013A23Rik","-","RIKEN cDNA 1810013A23 gene","ncRNA"]
["MACS_peak_188837","chr8",84985397,84986375,"+",387.77,"NA","Intergenic","Intergenic",-4709,"NM_133255",170833,"Mm.247775","NM_133255","ENSMUSG00000052566","Hook2","A630054I03Rik","hook homolog 2 (Drosophila)","protein-coding"]
["MACS_peak_103520","chr2",30657895,30659041,"+",383.69,"NA","Intergenic","CpG",-62742,"NR_037272",100526499,null,"NR_037272","ENSMUSG00000093091","Mir3089","mir-3089|mmu-mir-3089","microRNA 3089","ncRNA"]
["MACS_peak_2633","chr1",74295113,74296203,"+",372.51,"NA","intron (NM_027154, intron 1 of 11)","intron (NM_027154, intron 1 of 11)",8678,"NM_027154",69660,"Mm.261182","NM_027154","ENSMUSG00000006301","Tmbim1","2310061B02Rik|AA960455|AU024746|C78899|RECS1|Tmbib1|mKIAA4161","transmembrane BAX inhibitor motif containing 1","protein-coding"]
["MACS_peak_171667","chr7",34655115,34655926,"+",369.5,"NA","Intergenic","CpG",-2679,"NM_146188",233107,"Mm.486198","NM_146188","ENSMUSG00000030499","Kctd15","BC031749","potassium channel tetramerisation domain containing 15","protein-coding"]
["MACS_peak_81628","chr17",29159836,29160744,"+",369.29,"NA","intron (NM_153166, intron 19 of 20)","intron (NM_153166, intron 19 of 20)",25234,"NM_001002786",442827,"Mm.440341","NM_001002786","ENSMUSG00000064147","Rab44","9830134C10Rik","RAB44, member RAS oncogene family","protein-coding"]
["MACS_peak_170630","chr7",28569524,28570796,"+",368.94,"NA","intron (NM_027470, intron 1 of 9)","intron (NM_027470, intron 1 of 9)",-9176,"NR_106016",102466795,null,"NR_106016","ENSMUSG00000098558","Mir7049","Gm27277|mmu-mir-7049","microRNA 7049","ncRNA"]
["MACS_peak_180008","chr7",127886455,127887674,"+",367.98,"NA","exon (NM_001081268, exon 9 of 11)","exon (NM_001081268, exon 9 of 11)",3906,"NM_001081268",330657,"Mm.425491","NM_001081268","ENSMUSG00000044139","Prss53","Pol3s|mFLJ00289","protease, serine 53","protein-coding"]
["MACS_peak_108911","chr2",116975256,116976218,"+",365.39,"NA","Intergenic","CpG",75585,"NR_040335",320975,"Mm.132509","NR_040335","ENSMUSG00000085316","D330050G23Rik","-","RIKEN cDNA D330050G23 gene","ncRNA"]
["MACS_peak_152614","chr5",123138346,123139365,"+",364.92,"NA","Intergenic","CpG",-3338,"NM_001040398",208043,"Mm.250391","NM_177581","ENSMUSG00000038384","Setd1b","AA516740|BC035291|KMT2G|mKIAA1076","SET domain containing 1B","protein-coding"]
["MACS_peak_24471","chr11",54955711,54956383,"+",357.58,"NA","5' UTR (NM_001199275, exon 2 of 19)","5' UTR (NM_001199275, exon 2 of 19)",6893,"NM_021327",57783,"Mm.259671","NM_021327","ENSMUSG00000020400","Tnip1","ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN","TNFAIP3 interacting protein 1","protein-coding"]
["MACS_peak_105530","chr2",35661185,35662143,"+",351.88,"NA","intron (NM_001290641, intron 3 of 15)","CpG-8041",-30330,"NM_001001602",69601,"Mm.29629","NM_001001602","ENSMUSG00000026883","Dab2ip","2310011D08Rik|AI480459|Aip1|mKIAA1743","disabled 2 interacting protein","protein-coding"]
["MACS_peak_81782","chr17",29401464,29402543,"+",351.09,"NA","Intergenic","Intergenic",41089,"NM_001159538",26382,"Mm.279187","NM_013710","ENSMUSG00000024013","Fgd2","Tcd-2|Tcd2|ZFYVE4|tcs-2|tcs2","FYVE, RhoGEF and PH domain containing 2","protein-coding"]
["MACS_peak_156272","chr5",139796720,139797731,"+",351.02,"NA","intron (NM_010757, intron 1 of 2)","intron (NM_010757, intron 1 of 2)",5689,"NM_010757",17135,"Mm.157313","NM_010757","ENSMUSG00000018143","Mafk","AW061068|NF-E2|Nfe2u","v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)","protein-coding"]
["MACS_peak_84580","chr17",46856997,46857635,"+",349.97,"NA","Intergenic","CpG",-25903,"NM_001100452",210982,"Mm.37642","NM_001100452","ENSMUSG00000036568","Gltscr1l","mKIAA0240","GLTSCR1-like","protein-coding"]
["MACS_peak_47143","chr12",112130058,112130930,"+",347.8,"NA","promoter-TSS (NR_029590)","promoter-TSS (NR_029590)",-386,"NR_029590",387199,null,"NR_029590","ENSMUSG00000065574","Mir203","Mirn203|mir-203|mmu-mir-203","microRNA 203","ncRNA"]
["MACS_peak_69556","chr15",96709276,96710315,"+",347.11,"NA","Intergenic","CpG",-10097,"NM_175121",67760,"Mm.46754","NM_175121","ENSMUSG00000022462","Slc38a2","5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382","solute carrier family 38, member 2","protein-coding"]
["MACS_peak_157160","chr5",142813796,142814704,"+",342.57,"NA","intron (NM_001122730, intron 2 of 27)","intron (NM_001122730, intron 2 of 27)",3137,"NM_178242",231861,"Mm.354649","NM_178242","ENSMUSG00000039477","Tnrc18","BC025631|EG381742|Zfp469","trinucleotide repeat containing 18","protein-coding"]
["MACS_peak_115251","chr2",167808580,167809381,"+",342.09,"NA","Intergenic","Intergenic",117803,"NR_015500",329562,"Mm.123101","NM_177851","ENSMUSG00000006462","A530013C23Rik","-","RIKEN cDNA A530013C23 gene","ncRNA"]
["MACS_peak_95293","chr19",6951216,6952399,"+",338.84,"NA","TTS (NM_007522)","TTS (NM_007522)",9245,"NM_001285453",12015,"Mm.4387","NM_007522","ENSMUSG00000024959","Bad","AI325008|Bbc2","BCL2-associated agonist of cell death","protein-coding"]
["MACS_peak_54076","chr13",103773920,103774905,"+",336.42,"NA","Intergenic","CpG",-9830,"NM_172592",218543,"Mm.458176","NM_172592","ENSMUSG00000032621","Srek1","8430401B01|AI450757|AI462342|SRrp508|SRrp86|Sfrs12|Srsf12","splicing regulatory glutamine/lysine-rich protein 1","protein-coding"]
["MACS_peak_3786","chr1",88639369,88640253,"+",336.16,"NA","Intergenic","Intergenic",62380,"NM_177305",320982,"Mm.27968","NM_177305","ENSMUSG00000049866","Arl4c","A630084M22Rik|Arl7|LAK","ADP-ribosylation factor-like 4C","protein-coding"]
["MACS_peak_133653","chr4",132532950,132533749,"+",335.69,"NA","exon (NM_007512, exon 3 of 4)","exon (NM_007512, exon 3 of 4)",2065,"NM_007512",11983,"Mm.2171","NM_007512","ENSMUSG00000054428","Atpif1","Atpi|IF(1)|If1","ATPase inhibitory factor 1","protein-coding"]
["MACS_peak_78028","chr17",6757382,6758359,"+",333.81,"NA","intron (NM_009510, intron 2 of 12)","intron (NM_009510, intron 2 of 12)",24910,"NM_009510",22350,"Mm.277812","NM_009510","ENSMUSG00000052397","Ezr","AW146364|R75297|Vil2|p81","ezrin","protein-coding"]
["MACS_peak_67124","chr15",83158111,83159285,"+",330.21,"NA","intron (NM_029787, intron 8 of 8)","MIRb|SINE|MIR",9053,"NR_004432",104307,"Mm.471434","NR_004432","ENSMUSG00000065176","Rnu12","-","RNA U12, small nuclear","snRNA"]
["MACS_peak_62278","chr15",36938265,36939174,"+",328.41,"NA","Intergenic","CpG",68683,"NM_026521",68036,"Mm.371631","NM_026521","ENSMUSG00000062397","Zfp706","3110006P09Rik|AA793007|AW536850|C77232|Znf706","zinc finger protein 706","protein-coding"]
["MACS_peak_171627","chr7",34570062,34570812,"+",327.35,"NA","Intergenic","Intergenic",82404,"NM_146188",233107,"Mm.486198","NM_146188","ENSMUSG00000030499","Kctd15","BC031749","potassium channel tetramerisation domain containing 15","protein-coding"]
["MACS_peak_180375","chr7",130645879,130646779,"+",321.68,"NA","intron (NM_001004468, intron 3 of 21)","CpG",-46227,"NM_021314",57752,"Mm.86322","NM_021314","ENSMUSG00000030852","Tacc2","mKIAA4180","transforming, acidic coiled-coil containing protein 2","protein-coding"]
["MACS_peak_135184","chr4",136174837,136175603,"+",316.97,"NA","intron (NM_177733, intron 1 of 6)","intron (NM_177733, intron 1 of 6)",2946,"NM_177733",242705,"Mm.307932","NM_177733","ENSMUSG00000018983","E2f2","E2F-2","E2F transcription factor 2","protein-coding"]
["MACS_peak_71858","chr16",5134251,5135138,"+",316.87,"NA","Intergenic","Intergenic",-2213,"NM_008909",19041,"Mm.266875","NM_008909","ENSMUSG00000039457","Ppl","AW553870","periplakin","protein-coding"]
["MACS_peak_128666","chr4",101292855,101293532,"+",315.98,"NA","Intergenic","CpG",-27911,"NM_146145",16451,"Mm.289657","NM_146145","ENSMUSG00000028530","Jak1","AA960307|BAP004|C130039L05Rik","Janus kinase 1","protein-coding"]
["MACS_peak_69771","chr15",97825080,97825901,"+",315.79,"NA","intron (NM_001204275, intron 1 of 24)","intron (NM_001204275, intron 1 of 24)",6277,"NM_019572",56233,"Mm.384027","NM_019572","ENSMUSG00000022475","Hdac7","5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062","histone deacetylase 7","protein-coding"]
["MACS_peak_78044","chr17",6827628,6828522,"+",314.05,"NA","Intergenic","CpG",-45295,"NM_009510",22350,"Mm.277812","NM_009510","ENSMUSG00000052397","Ezr","AW146364|R75297|Vil2|p81","ezrin","protein-coding"]
["MACS_peak_56936","chr14",34548997,34549684,"+",309.44,"NA","intron (NM_001039073, intron 10 of 14)","CpG",-26539,"NM_030062",78243,"Mm.117483","NM_030062","ENSMUSG00000021797","9230112D13Rik","-","RIKEN cDNA 9230112D13 gene","protein-coding"]
["MACS_peak_135181","chr4",136169646,136170464,"+",304.99,"NA","Intergenic","Intergenic",-2219,"NM_177733",242705,"Mm.307932","NM_177733","ENSMUSG00000018983","E2f2","E2F-2","E2F transcription factor 2","protein-coding"]
["MACS_peak_168786","chr7",16313853,16314550,"+",304.55,"NA","intron (NM_133234, intron 3 of 3)","intron (NM_133234, intron 3 of 3)",4618,"NM_133234",170770,"Mm.7660","NM_133234","ENSMUSG00000002083","Bbc3","PUMA|PUMA/JFY1","BCL2 binding component 3","protein-coding"]
["MACS_peak_135702","chr4",137387929,137388820,"+",304.54,"NA","Intergenic","CpG",21417,"NM_001126318",242711,"Mm.475541","NM_001126318","ENSMUSG00000078520","Cela3a","Gm13011|OTTMUSG00000009877","chymotrypsin-like elastase family, member 3A","protein-coding"]
["MACS_peak_141556","chr4",155063614,155064450,"+",303.31,"NA","Intergenic","Intergenic",-2998,"NM_001042407",668173,"Mm.133114","NM_001042407","ENSMUSG00000029047","Pex10","AV128229|Gm142","peroxisomal biogenesis factor 10","protein-coding"]
["MACS_peak_17519","chr10",81145031,81145868,"+",300.8,"NA","intron (NM_010731, intron 2 of 2)","B1_Mur2|SINE|Alu",9178,"NM_010731",16969,"Mm.20920","NM_010731","ENSMUSG00000035011","Zbtb7a","9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7","zinc finger and BTB domain containing 7a","protein-coding"]
["MACS_peak_104035","chr2",31541570,31542333,"+",299.74,"NA","Intergenic","Intergenic",-30700,"NM_001033389",320267,"Mm.207261","NM_001033389","ENSMUSG00000026843","Fubp3","A330051M14Rik|AV006371|FBP3|Marta2","far upstream element (FUSE) binding protein 3","protein-coding"]
["MACS_peak_71694","chr16",4586518,4587086,"+",298.08,"NA","Intergenic","CpG",-7911,"NM_031184",83396,"Mm.134072","NM_031184","ENSMUSG00000014303","Glis2","Gli5|Klf16|Nkl","GLIS family zinc finger 2","protein-coding"]
["MACS_peak_103560","chr2",30711857,30712577,"+",298.01,"NA","Intergenic","CpG",-8993,"NR_037272",100526499,null,"NR_037272","ENSMUSG00000093091","Mir3089","mir-3089|mmu-mir-3089","microRNA 3089","ncRNA"]
["MACS_peak_87444","chr17",83899273,83900063,"+",297.87,"NA","Intergenic","Intergenic",-52878,"NM_025325",107766,"Mm.30100","NM_025325","ENSMUSG00000000673","Haao","0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO","3-hydroxyanthranilate 3,4-dioxygenase","protein-coding"]
["MACS_peak_136683","chr4",139594981,139595937,"+",296.79,"NA","intron (NM_001205173, intron 1 of 8)","intron (NM_001205173, intron 1 of 8)",20739,"NM_001205173",212632,"Mm.30464","NM_183148","ENSMUSG00000041025","Iffo2","C79267","intermediate filament family orphan 2","protein-coding"]
["MACS_peak_21244","chr11",5061945,5062787,"+",294.76,"NA","intron (NM_001190406, intron 3 of 4)","intron (NM_001190406, intron 3 of 4)",2961,"NM_144560",78926,"Mm.44591","NM_030228","ENSMUSG00000034201","Gas2l1","4930500E24Rik|D0Jmb1|Gar22|TU-71.1","growth arrest-specific 2 like 1","protein-coding"]
["MACS_peak_32658","chr11",100285008,100286045,"+",293.2,"NA","Intergenic","Intergenic",-15655,"NM_212483",68239,"Mm.158190","NM_212483","ENSMUSG00000053654","Krt42","2410039E07Rik|K17n|Ka22|ecat6","keratin 42","protein-coding"]
["MACS_peak_122461","chr3",103102370,103103174,"+",292.44,"NA","Intergenic","CpG",-24784,"NM_177857",329727,"Mm.293641","NM_177857","ENSMUSG00000007379","Dennd2c","A930010I20Rik","DENN/MADD domain containing 2C","protein-coding"]
["MACS_peak_190871","chr8",106619397,106620402,"+",292.32,"NA","intron (NM_009864, intron 2 of 15)","intron (NM_009864, intron 2 of 15)",16549,"NM_009864",12550,"Mm.35605","NM_009864","ENSMUSG00000000303","Cdh1","AA960649|ARC-1|E-cad|Ecad|L-CAM|UVO|Um","cadherin 1","protein-coding"]
["MACS_peak_101197","chr2",25245756,25246486,"+",292.16,"NA","exon (NM_001252542, exon 14 of 14)","exon (NM_001252542, exon 14 of 14)",3192,"NM_176834",68846,"Mm.24777","NM_176834","ENSMUSG00000044628","Rnf208","1110061N23Rik","ring finger protein 208","protein-coding"]
["MACS_peak_115231","chr2",167778293,167779095,"+",291.8,"NA","Intergenic","Intergenic",87517,"NR_015500",329562,"Mm.123101","NM_177851","ENSMUSG00000006462","A530013C23Rik","-","RIKEN cDNA A530013C23 gene","ncRNA"]
["MACS_peak_24806","chr11",57962315,57963145,"+",291.55,"NA","Intergenic","Intergenic",-46334,"NM_028451",73158,"Mm.248843","NM_028451","ENSMUSG00000037331","Larp1","1810024J12Rik|3110040D16Rik|Larp|mKIAA0731","La ribonucleoprotein domain family, member 1","protein-coding"]
["MACS_peak_90201","chr18",38202721,38203343,"+",287.59,"NA","exon (NM_029357, exon 2 of 3)","exon (NM_029357, exon 2 of 3)",6730,"NM_029357",75599,"Mm.36560","NM_029357","ENSMUSG00000051375","Pcdh1","2010005A06Rik|AI585920","protocadherin 1","protein-coding"]
["MACS_peak_183567","chr8",4677238,4678197,"+",285.87,"NA","Intergenic","CpG",64547,"NM_145591",233987,"Mm.102799","NM_145591",null,"Zfp958","-","zinc finger protein 958","protein-coding"]
["MACS_peak_153342","chr5",125140031,125140804,"+",284.38,"NA","intron (NM_011424, intron 1 of 46)","intron (NM_011424, intron 1 of 46)",38797,"NM_001253905",20602,"Mm.278646","NM_011424","ENSMUSG00000029478","Ncor2","N-CoR|SMRT|SMRTe","nuclear receptor co-repressor 2","protein-coding"]
["MACS_peak_78627","chr17",13743036,13744123,"+",281.94,"NA","intron (NM_022311, intron 1 of 2)","intron (NM_022311, intron 1 of 2)",-16962,"NM_010806",17356,"Mm.59167","NM_010806","ENSMUSG00000068036","Mllt4","5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|S-afadin","myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4","protein-coding"]
["MACS_peak_44165","chr12",99392172,99392850,"+",281.49,"NA","intron (NM_183186, intron 1 of 5)","CpG",57563,"NM_183186",71375,"Mm.341972","NM_183186","ENSMUSG00000033713","Foxn3","5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1","forkhead box N3","protein-coding"]
["MACS_peak_153343","chr5",125140821,125141295,"+",281.13,"NA","intron (NM_011424, intron 1 of 46)","intron (NM_011424, intron 1 of 46)",38156,"NM_001253905",20602,"Mm.278646","NM_011424","ENSMUSG00000029478","Ncor2","N-CoR|SMRT|SMRTe","nuclear receptor co-repressor 2","protein-coding"]
["MACS_peak_26775","chr11",69410806,69411437,"+",278.44,"NA","intron (NM_001017426, intron 1 of 22)","CpG",2554,"NM_001017426",216850,"Mm.261201","NM_001017426","ENSMUSG00000018476","Kdm6b","1700064E03Rik|BC038313|Jmjd3|mKIAA0346","KDM1 lysine (K)-specific demethylase 6B","protein-coding"]
["MACS_peak_84579","chr17",46856324,46856969,"+",276.94,"NA","Intergenic","CpG",-25233,"NM_001100452",210982,"Mm.37642","NM_001100452","ENSMUSG00000036568","Gltscr1l","mKIAA0240","GLTSCR1-like","protein-coding"]
["MACS_peak_71456","chr15",102999207,102999865,"+",276.31,"NA","Intergenic","Intergenic",8997,"NM_010466",15426,"Mm.6167","NM_010466",null,"Hoxc8","D130011F21Rik|Hox-3.1","homeobox C8","protein-coding"]
["MACS_peak_27772","chr11",74637908,74638920,"+",276.01,"NA","exon (NM_001013784, exon 4 of 4)","exon (NM_001013784, exon 4 of 4)",-11081,"NM_001081158",74148,"Mm.214574","NM_001081158","ENSMUSG00000020741","Cluh","1300001I01Rik|Kiaa0664|mKIAA0664","clustered mitochondria (cluA/CLU1) homolog","protein-coding"]
["MACS_peak_149043","chr5",113216209,113217032,"+",275.15,"NA","Intergenic","Intergenic",-10289,"NM_001033428",333048,"Mm.332586","NM_001033428","ENSMUSG00000066964","Tmem211","Gm854","transmembrane protein 211","protein-coding"]
["MACS_peak_195333","chr8",124265558,124266325,"+",274.83,"NA","intron (NM_139272, intron 1 of 15)","intron (NM_139272, intron 1 of 15)",34547,"NM_139272",108148,"Mm.33808","NM_139272","ENSMUSG00000089704","Galnt2","AI480629","UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2","protein-coding"]
["MACS_peak_9884","chr1",180777590,180778410,"+",274.51,"NA","Intergenic","CpG",35605,"NM_008210",15078,"Mm.138832","NM_008210","ENSMUSG00000060743","H3f3a","H3.3A","H3 histone, family 3A","protein-coding"]
["MACS_peak_47138","chr12",112125924,112126758,"+",274.15,"NA","exon (NM_001081169, exon 14 of 15)","exon (NM_001081169, exon 14 of 15)",-4539,"NR_029590",387199,null,"NR_029590","ENSMUSG00000065574","Mir203","Mirn203|mir-203|mmu-mir-203","microRNA 203","ncRNA"]
["MACS_peak_152829","chr5",123979154,123979824,"+",272.12,"NA","intron (NM_145070, intron 1 of 31)","intron (NM_145070, intron 1 of 31)",5861,"NM_145070",29816,"Mm.149954","NM_145070",null,"Hip1r","AA410023|mKIAA0655","huntingtin interacting protein 1 related","protein-coding"]
["MACS_peak_133993","chr4",133489039,133489996,"+",271.69,"NA","Intergenic","Intergenic",9033,"NM_001081156",69539,"Mm.151594","NM_001081156","ENSMUSG00000056596","Trnp1","2300002D11Rik|Trnp","TMF1-regulated nuclear protein 1","protein-coding"]
["MACS_peak_136632","chr4",139500643,139501442,"+",270.33,"NA","Intergenic","Intergenic",-29506,"NM_183148",212632,"Mm.30464","NM_183148","ENSMUSG00000041025","Iffo2","C79267","intermediate filament family orphan 2","protein-coding"]
["MACS_peak_166665","chr6",125343992,125344652,"+",270.26,"NA","3' UTR (NM_011324, exon 12 of 12)","3' UTR (NM_011324, exon 12 of 12)",-5401,"NM_011609",21937,"Mm.1258","NM_011609","ENSMUSG00000030341","Tnfrsf1a","CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R","tumor necrosis factor receptor superfamily, member 1a","protein-coding"]
["MACS_peak_87443","chr17",83897306,83898065,"+",270.13,"NA","Intergenic","Intergenic",-50895,"NM_025325",107766,"Mm.30100","NM_025325","ENSMUSG00000000673","Haao","0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO","3-hydroxyanthranilate 3,4-dioxygenase","protein-coding"]
["MACS_peak_81325","chr17",28340977,28341827,"+",269.54,"NA","exon (NM_001098226, exon 2 of 13)","exon (NM_001098226, exon 2 of 13)",8944,"NM_001204156",21678,"Mm.6655","NM_011566","ENSMUSG00000002249","Tead3","DTEF-1|ETFR-1|TEAD-3|TEF-5|Tcf13r2","TEA domain family member 3","protein-coding"]
["MACS_peak_77237","chr16",94313185,94313896,"+",267.16,"NA","Intergenic","CpG",-14882,"NM_133229",170765,"Mm.42604","NM_133229","ENSMUSG00000022941","Ripply3","Dscr6","ripply3 homolog (zebrafish)","protein-coding"]
["MACS_peak_26773","chr11",69408525,69409540,"+",266.26,"NA","intron (NM_001017426, intron 1 of 22)","intron (NM_001017426, intron 1 of 22)",4643,"NM_001017426",216850,"Mm.261201","NM_001017426","ENSMUSG00000018476","Kdm6b","1700064E03Rik|BC038313|Jmjd3|mKIAA0346","KDM1 lysine (K)-specific demethylase 6B","protein-coding"]
["MACS_peak_190115","chr8",95137075,95137927,"+",264.04,"NA","intron (NM_010631, intron 2 of 19)","intron (NM_010631, intron 2 of 19)",5039,"NM_010631",16582,"Mm.378951","NM_010631","ENSMUSG00000031788","Kifc3","AI325457|BB123200","kinesin family member C3","protein-coding"]
["MACS_peak_121392","chr3",90536648,90537507,"+",262.8,"NA","Intergenic","Intergenic",-4146,"NM_026416",67860,"Mm.331185","NM_026416","ENSMUSG00000074457","S100a16","2300002L21Rik|AI325039|AI663996|DT1P1A7|S100F","S100 calcium binding protein A16","protein-coding"]
["MACS_peak_90202","chr18",38203398,38203991,"+",261.95,"NA","intron (NM_029357, intron 1 of 2)","intron (NM_029357, intron 1 of 2)",6068,"NM_029357",75599,"Mm.36560","NM_029357","ENSMUSG00000051375","Pcdh1","2010005A06Rik|AI585920","protocadherin 1","protein-coding"]
["MACS_peak_170160","chr7",25781430,25782066,"+",261.83,"NA","intron (NM_009465, intron 4 of 19)","intron (NM_009465, intron 4 of 19)",6985,"NM_001190974",26362,"Mm.4128","NM_009465","ENSMUSG00000002602","Axl","AI323647|Ark|Tyro7|Ufo","AXL receptor tyrosine kinase","protein-coding"]
["MACS_peak_99765","chr19",56821859,56822725,"+",260.95,"NA","Intergenic","CpG",-3917,"NM_001002238",83561,"Mm.247541","NM_031387","ENSMUSG00000025081","Tdrd1","MTR-1","tudor domain containing 1","protein-coding"]
["MACS_peak_139809","chr4",151347050,151347528,"+",260.63,"NA","intron (NM_001081557, intron 5 of 23)","intron (NM_001081557, intron 5 of 23)",257719,"NM_001308446",105704528,"Mm.415128","NM_001308446",null,"Gm13090","OTTMUSG00000010356","predicted gene 13090","protein-coding"]
["MACS_peak_30489","chr11",89186794,89187617,"+",260.01,"NA","Intergenic","Intergenic",113364,"NM_001033266",217071,"Mm.342127","NM_001033266","ENSMUSG00000072553","Gm525","-","predicted gene 525","protein-coding"]
["MACS_peak_17517","chr10",81142690,81143347,"+",258.76,"NA","intron (NM_010731, intron 1 of 2)","intron (NM_010731, intron 1 of 2)",6747,"NM_010731",16969,"Mm.20920","NM_010731","ENSMUSG00000035011","Zbtb7a","9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7","zinc finger and BTB domain containing 7a","protein-coding"]
["MACS_peak_94556","chr19",5529341,5530018,"+",258.32,"NA","Intergenic","Intergenic",-19190,"NM_001024560",225861,"Mm.20071","NM_001024560","ENSMUSG00000056185","Snx32","B930037P14Rik|Snx6b","sorting nexin 32","protein-coding"]
["MACS_peak_75799","chr16",59600541,59601087,"+",257.82,"NA","Intergenic","CpG",-36131,"NR_040564",75145,"Mm.399348","NR_040564",null,"4930547E14Rik","-","RIKEN cDNA 4930547E14 gene","ncRNA"]
["MACS_peak_102677","chr2",28527404,28528354,"+",257.81,"NA","intron (NM_001145834, intron 1 of 17)","intron (NM_001145834, intron 1 of 17)",-5585,"NM_001145835",19730,"Mm.5236","NM_009058","ENSMUSG00000026821","Ralgds","Gnds|Rgds|mKIAA1308","ral guanine nucleotide dissociation stimulator","protein-coding"]
["MACS_peak_120142","chr3",84190369,84191302,"+",257.27,"NA","exon (NM_001271728, exon 6 of 12)","exon (NM_001271728, exon 6 of 12)",16197,"NR_036654",624713,"Mm.442604","NR_036654",null,"Gm6525","EG624713","ribosomal protein L36a pseudogene","pseudo"]
["MACS_peak_41815","chr12",70968308,70968748,"+",257.26,"NA","Intergenic","CpG",-6095,"NM_001310595",19167,"Mm.296338","NM_011184","ENSMUSG00000060073","Psma3","Lmpc8","proteasome (prosome, macropain) subunit, alpha type 3","protein-coding"]
["MACS_peak_68361","chr15",86074151,86074943,"+",257,"NA","intron (NM_001205353, intron 1 of 18)","intron (NM_001205353, intron 1 of 18)",15820,"NM_001205353",223752,"Mm.24442","NM_172611","ENSMUSG00000035900","Gramd4","9930016O13","GRAM domain containing 4","protein-coding"]
["MACS_peak_49718","chr13",44733684,44734290,"+",256.98,"NA","intron (NM_001205044, intron 2 of 18)","CpG",2716,"NM_001205043",16468,"Mm.25059","NM_021878","ENSMUSG00000038518","Jarid2","Jmj|jumonji","jumonji, AT rich interactive domain 2","protein-coding"]
["MACS_peak_80440","chr17",27048287,27049343,"+",255.76,"NA","Intergenic","Intergenic",-8489,"NM_080553",16440,"Mm.458106","NM_080553","ENSMUSG00000042644","Itpr3","Ip3r3|Itpr-3","inositol 1,4,5-triphosphate receptor 3","protein-coding"]
["MACS_peak_124891","chr4",8647102,8647745,"+",252.28,"NA","Intergenic","CpG",-42983,"NM_001277149",320790,"Mm.138792","NM_001033395","ENSMUSG00000041235","Chd7","A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis","chromodomain helicase DNA binding protein 7","protein-coding"]
["MACS_peak_93176","chr18",80655301,80656296,"+",251.66,"NA","intron (NM_198429, intron 6 of 9)","intron (NM_198429, intron 6 of 9)",52375,"NM_001164111",18018,"Mm.329560","NM_016791","ENSMUSG00000033016","Nfatc1","2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb","nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1","protein-coding"]
["MACS_peak_32657","chr11",100284253,100284982,"+",251.34,"NA","Intergenic","Intergenic",-14746,"NM_212483",68239,"Mm.158190","NM_212483","ENSMUSG00000053654","Krt42","2410039E07Rik|K17n|Ka22|ecat6","keratin 42","protein-coding"]
["MACS_peak_111001","chr2",145860420,145861105,"+",250.71,"NA","exon (NM_028724, exon 9 of 13)","exon (NM_028724, exon 9 of 13)",-42479,"NM_026425",67877,"Mm.151168","NM_026425","ENSMUSG00000002728","Naa20","1500004D14Rik|2900026I01Rik|AU041458|D2Ertd186e|Nat5","N(alpha)-acetyltransferase 20, NatB catalytic subunit","protein-coding"]
["MACS_peak_175538","chr7",80207743,80208507,"+",250.62,"NA","intron (NM_013659, intron 2 of 14)","intron (NM_013659, intron 2 of 14)",21284,"NM_013659",20352,"Mm.275909","NM_013659","ENSMUSG00000030539","Sema4b","SemC|Semac|mKIAA1745","sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B","protein-coding"]
["MACS_peak_128434","chr4",95161120,95161796,"+",249.63,"NA","Intergenic","CpG",-109236,"NM_010591",16476,"Mm.275071","NM_010591","ENSMUSG00000052684","Jun","AP-1|Junc|c-jun","jun proto-oncogene","protein-coding"]
["MACS_peak_25612","chr11",60935065,60935914,"+",247.55,"NA","intron (NM_008928, intron 1 of 11)","intron (NM_008928, intron 1 of 11)",3432,"NM_008928",26397,"Mm.18494","NM_008928","ENSMUSG00000018932","Map2k3","AW212142|MEK3|MKK3|Prkmk3|mMKK3b","mitogen-activated protein kinase kinase 3","protein-coding"]
["MACS_peak_103558","chr2",30709148,30710022,"+",247.2,"NA","Intergenic","Intergenic",-11625,"NR_037272",100526499,null,"NR_037272","ENSMUSG00000093091","Mir3089","mir-3089|mmu-mir-3089","microRNA 3089","ncRNA"]
["MACS_peak_189471","chr8",90869010,90870116,"+",244.65,"NA","intron (NM_177224, intron 2 of 39)","intron (NM_177224, intron 2 of 39)",40728,"NM_177224",109151,"Mm.100615","NM_177224","ENSMUSG00000056608","Chd9","1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308","chromodomain helicase DNA binding protein 9","protein-coding"]
["MACS_peak_121399","chr3",90586798,90587476,"+",241.14,"NA","Intergenic","Intergenic",-3110,"NM_001195760",628324,"Mm.33816","NM_001195760","ENSMUSG00000094018","S100a2","CaN19|EG628324|S100L","S100 calcium binding protein A2","protein-coding"]
["MACS_peak_115270","chr2",167833286,167834037,"+",241.13,"NA","Intergenic","Intergenic",-98666,"NM_011201",19246,"Mm.277916","NM_011201","ENSMUSG00000027540","Ptpn1","PTP-1B|PTP-HA2|PTP1B","protein tyrosine phosphatase, non-receptor type 1","protein-coding"]
["MACS_peak_205139","chr9",106377030,106377890,"+",241.12,"NA","Intergenic","Intergenic",8828,"NM_153459",235584,"Mm.275584","NM_153459","ENSMUSG00000053716","Dusp7","AU015694|Mkpx|Pyst2","dual specificity phosphatase 7","protein-coding"]
["MACS_peak_120610","chr3",87958353,87959085,"+",240.51,"NA","Intergenic","Intergenic",10026,"NM_007759",12904,"Mm.4757","NM_007759","ENSMUSG00000004885","Crabp2","AI893628|Crabp-2|CrabpII","cellular retinoic acid binding protein II","protein-coding"]
["MACS_peak_69797","chr15",97876252,97876945,"+",238.58,"NA","intron (NM_009504, intron 4 of 9)","intron (NM_009504, intron 4 of 9)",31698,"NM_009504",22337,"Mm.245084","NM_009504","ENSMUSG00000022479","Vdr","Nr1i1","vitamin D receptor","protein-coding"]
["MACS_peak_64188","chr15",74891801,74892589,"+",238.1,"NA","Intergenic","Intergenic",-10491,"NM_025929",67038,"Mm.154566","NM_025929","ENSMUSG00000063522","2010109I03Rik","-","RIKEN cDNA 2010109I03 gene","protein-coding"]
["MACS_peak_131160","chr4",121214757,121215468,"+",237.93,"NA","Intergenic","CpG",-26578,"NM_001081013",109263,"Mm.215745","NM_001081013","ENSMUSG00000049878","Rlf","9230110M18Rik|AI195322|MommeD8","rearranged L-myc fusion sequence","protein-coding"]
["MACS_peak_59941","chr14",76152121,76152684,"+",236.79,"NA","Intergenic","Intergenic",41511,"NM_013745",27275,"Mm.21138","NM_013745","ENSMUSG00000022009","Nufip1","Nufip","nuclear fragile X mental retardation protein interacting protein 1","protein-coding"]
["MACS_peak_161239","chr6",67532941,67533398,"+",236.75,"NA","TTS (NM_020047)","TTS (NM_020047)",2653,"NM_020047",56753,"Mm.439913","NM_020047","ENSMUSG00000051397","Tacstd2","C80403|EGP-1|GA733-1|Ly97|TROP2","tumor-associated calcium signal transducer 2","protein-coding"]
["MACS_peak_46696","chr12",111005594,111006284,"+",236.18,"NA","intron (NR_036598, intron 1 of 2)","intron (NR_036598, intron 1 of 2)",11541,"NR_036598",77878,"Mm.293198","NR_036598",null,"6030440G07Rik","-","RIKEN cDNA 6030440G07 gene","ncRNA"]
["MACS_peak_26774","chr11",69409746,69410481,"+",236.18,"NA","intron (NM_001017426, intron 1 of 22)","CpG",3562,"NM_001017426",216850,"Mm.261201","NM_001017426","ENSMUSG00000018476","Kdm6b","1700064E03Rik|BC038313|Jmjd3|mKIAA0346","KDM1 lysine (K)-specific demethylase 6B","protein-coding"]
["MACS_peak_134185","chr4",134061664,134062659,"+",235.92,"NA","Intergenic","Intergenic",-6291,"NM_001162970",230806,"Mm.240080","NM_001162970","ENSMUSG00000012123","Aim1l","-","absent in melanoma 1-like","protein-coding"]
["MACS_peak_156966","chr5",142442171,142442772,"+",233,"NA","intron (NM_199068, intron 2 of 8)","intron (NM_199068, intron 2 of 8)",-21460,"NM_172725",231855,"Mm.78250","NM_172725","ENSMUSG00000039623","Ap5z1","C330006K01Rik","adaptor-related protein complex 5, zeta 1 subunit","protein-coding"]
["MACS_peak_195332","chr8",124264442,124265119,"+",232.48,"NA","intron (NM_139272, intron 1 of 15)","intron (NM_139272, intron 1 of 15)",33386,"NM_139272",108148,"Mm.33808","NM_139272","ENSMUSG00000089704","Galnt2","AI480629","UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2","protein-coding"]
["MACS_peak_80433","chr17",27038973,27039586,"+",231.91,"NA","Intergenic","Intergenic",10020,"NM_027544",70772,"Mm.440437","NM_027544","ENSMUSG00000048731","Ggnbp1","0610031G08Rik|mdf","gametogenetin binding protein 1","protein-coding"]
["MACS_peak_47404","chr12",112578182,112578928,"+",229.26,"NA","Intergenic","Intergenic",-10229,"NM_198411",70435,"Mm.250193","NM_198411","ENSMUSG00000037679","Inf2","2610204M08Rik|AA589465|AW125550|EG629699","inverted formin, FH2 and WH2 domain containing","protein-coding"]
["MACS_peak_134052","chr4",133607904,133608476,"+",228.74,"NA","3' UTR (NM_001017968, exon 8 of 8)","3' UTR (NM_001017968, exon 8 of 8)",-6022,"NM_018754",55948,"Mm.44482","NM_018754","ENSMUSG00000047281","Sfn","Er|Mme1|Ywhas","stratifin","protein-coding"]
["MACS_peak_148993","chr5",113153028,113153790,"+",228.39,"NA","intron (NM_172884, intron 1 of 7)","intron (NM_172884, intron 1 of 7)",9904,"NM_172884",243219,"Mm.160131","NM_172884","ENSMUSG00000051339","2900026A02Rik","8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671","RIKEN cDNA 2900026A02 gene","protein-coding"]
["MACS_peak_101781","chr2",26506761,26507390,"+",227.38,"NA","Intergenic","Intergenic",3148,"NR_132655",102639736,null,"NR_132655",null,"Gm35978","-","predicted gene, 35978","ncRNA"]
["MACS_peak_180764","chr7",132931232,132931881,"+",226.59,"NA","Intergenic","CpG",-18066,"NM_207302",360216,"Mm.389984","NM_207302","ENSMUSG00000030967","Zranb1","9330160G10Rik|D7Wsu87e|Gm1956|Trabid","zinc finger, RAN-binding domain containing 1","protein-coding"]
["MACS_peak_161608","chr6",72926665,72927347,"+",224.62,"NA","Intergenic","Intergenic",-27027,"NM_019715",74287,"Mm.29194","NM_019715","ENSMUSG00000055239","Kcmf1","1700094M07Rik|Debt91|Pmcf","potassium channel modulatory factor 1","protein-coding"]
["MACS_peak_103557","chr2",30708119,30708683,"+",223.91,"NA","Intergenic","Intergenic",-12809,"NR_037272",100526499,null,"NR_037272","ENSMUSG00000093091","Mir3089","mir-3089|mmu-mir-3089","microRNA 3089","ncRNA"]
["MACS_peak_47579","chr12",112795219,112795876,"+",222.46,"NA","Intergenic","Intergenic",-13428,"NM_145450",217887,"Mm.186678","NM_145450","ENSMUSG00000037594","BC022687","AW050009|C130001I08Rik|Flj20080","cDNA sequence BC022687","protein-coding"]
["MACS_peak_133996","chr4",133494173,133494792,"+",219.7,"NA","intron (NM_001081156, intron 1 of 1)","B1_Mur4|SINE|Alu",4068,"NM_001081156",69539,"Mm.151594","NM_001081156","ENSMUSG00000056596","Trnp1","2300002D11Rik|Trnp","TMF1-regulated nuclear protein 1","protein-coding"]
["MACS_peak_205125","chr9",106358854,106359612,"+",219.64,"NA","Intergenic","Intergenic",-9399,"NM_153459",235584,"Mm.275584","NM_153459","ENSMUSG00000053716","Dusp7","AU015694|Mkpx|Pyst2","dual specificity phosphatase 7","protein-coding"]
["MACS_peak_198598","chr9",43777675,43778426,"+",219.52,"NA","intron (NM_021424, intron 1 of 5)","intron (NM_021424, intron 1 of 5)",33474,"NM_021424",58235,"Mm.335096","NM_021424","ENSMUSG00000032012","Pvrl1","AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|nectin-1","poliovirus receptor-related 1","protein-coding"]
["MACS_peak_137684","chr4",141352621,141353257,"+",218.78,"NA","Intergenic","Intergenic",-15253,"NM_001085513",277743,"Mm.294614","NM_001085513","ENSMUSG00000006218","Fam131c","Gm693","family with sequence similarity 131, member C","protein-coding"]
["MACS_peak_203394","chr9",76566912,76567578,"+",218.45,"NA","Intergenic","CpG",-21441,"NM_001045518",208994,"Mm.256929","NM_001045518","ENSMUSG00000032358","Fam83b","C530008M07Rik|Gm516","family with sequence similarity 83, member B","protein-coding"]
["MACS_peak_118660","chr3",32397530,32398049,"+",218.31,"NA","Intergenic","CpG",-32124,"NM_009517",22401,"Mm.35705","NM_009517","ENSMUSG00000027663","Zmat3","Wig1","zinc finger matrin type 3","protein-coding"]
["MACS_peak_32659","chr11",100286753,100287357,"+",216.35,"NA","Intergenic","Intergenic",-17184,"NM_212483",68239,"Mm.158190","NM_212483","ENSMUSG00000053654","Krt42","2410039E07Rik|K17n|Ka22|ecat6","keratin 42","protein-coding"]
["MACS_peak_47583","chr12",112798095,112798590,"+",216.29,"NA","Intergenic","Intergenic",-10633,"NM_145450",217887,"Mm.186678","NM_145450","ENSMUSG00000037594","BC022687","AW050009|C130001I08Rik|Flj20080","cDNA sequence BC022687","protein-coding"]
["MACS_peak_59629","chr14",70585604,70586312,"+",215.73,"NA","intron (NM_194345, intron 14 of 16)","intron (NM_194345, intron 14 of 16)",8111,"NM_153136",213484,"Mm.34191","NM_153136","ENSMUSG00000045211","Nudt18","BC036718","nudix (nucleoside diphosphate linked moiety X)-type motif 18","protein-coding"]
["MACS_peak_69779","chr15",97839934,97840488,"+",214.42,"NA","intron (NM_001204275, intron 1 of 24)","intron (NM_001204275, intron 1 of 24)",4291,"NM_001204279",56233,"Mm.384027","NM_019572","ENSMUSG00000022475","Hdac7","5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062","histone deacetylase 7","protein-coding"]
["MACS_peak_128362","chr4",88937786,88938384,"+",214.29,"NA","intron (NR_132735, intron 1 of 2)","CpG",3957,"NR_132734",106557447,"Mm.484668","NR_132734",null,"LOC106557447","-","uncharacterized LOC106557447","ncRNA"]
["MACS_peak_179757","chr7",127008414,127009090,"+",213.63,"NA","intron (NM_080638, intron 1 of 14)","intron (NM_080638, intron 1 of 14)",5842,"NM_080638",78388,"Mm.228797","NM_080638","ENSMUSG00000030681","Mvp","2310009M24Rik|LRP|VAULT1","major vault protein","protein-coding"]
["MACS_peak_121077","chr3",89388076,89388805,"+",213.14,"NA","intron (NM_009565, intron 1 of 2)","intron (NM_009565, intron 1 of 2)",-3424,"NR_040403",545539,"Mm.393389","NR_040403","ENSMUSG00000074466","Gm15417","ENSMUSG00000074466|OTTMUSG00000021274","predicted gene 15417","ncRNA"]
["MACS_peak_183045","chr7",144566816,144567199,"+",212.09,"NA","Intergenic","Intergenic",-13278,"NM_001195086",233977,"Mm.490347","NM_001033319","ENSMUSG00000037519","Ppfia1","C030014K08Rik|C87158|LIP.1|LIP1","protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1","protein-coding"]
["MACS_peak_149975","chr5",115001347,115001936,"+",211.85,"NA","Intergenic","Intergenic",-9883,"NM_029012",74585,"Mm.355894","NM_029012","ENSMUSG00000029550","Sppl3","4833416I09Rik|Psl4|Usmg3","signal peptide peptidase 3","protein-coding"]
["MACS_peak_134941","chr4",135570286,135571158,"+",211.17,"NA","intron (NM_001013756, intron 1 of 15)","intron (NM_001013756, intron 1 of 15)",2898,"NM_001013756",230824,"Mm.331972","NM_001013756","ENSMUSG00000037188","Grhl3","AI561912|Get1|Som|Tfcp2l4|ct","grainyhead-like 3 (Drosophila)","protein-coding"]
["MACS_peak_207454","chr9",120010974,120011486,"+",211.09,"NA","Intergenic","CpG",12368,"NM_011724",22437,"Mm.10117","NM_011724","ENSMUSG00000079243","Xirp1","AI415219|Cmya1","xin actin-binding repeat containing 1","protein-coding"]
["MACS_peak_98861","chr19",47314412,47315172,"+",210.89,"NA","intron (NM_008018, intron 7 of 14)","intron (NM_008018, intron 7 of 14)",-41203,"NR_105961",102466782,null,"NR_105961","ENSMUSG00000098786","Mir6995","Gm27576|mmu-mir-6995","microRNA 6995","ncRNA"]
["MACS_peak_198604","chr9",43782914,43783481,"+",210.35,"NA","intron (NM_021424, intron 1 of 5)","intron (NM_021424, intron 1 of 5)",38621,"NM_021424",58235,"Mm.335096","NM_021424","ENSMUSG00000032012","Pvrl1","AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|nectin-1","poliovirus receptor-related 1","protein-coding"]
["MACS_peak_191991","chr8",117116041,117116652,"+",209.85,"NA","intron (NM_001163028, intron 6 of 11)","intron (NM_001163028, intron 6 of 11)",20481,"NM_001163028",63857,"Mm.174133","NM_021486","ENSMUSG00000031845","Bco1","Bcdo|Bcdo1|Bcmo1|CMO1|Cmoi|beta-CD|betaCMOOX","beta-carotene oxygenase 1","protein-coding"]
["MACS_peak_125644","chr4",40844250,40844731,"+",209.76,"NA","intron (NM_022305, intron 1 of 5)","intron (NM_022305, intron 1 of 5)",5648,"NR_039584",100628614,null,"NR_039584","ENSMUSG00000096377","Mir5123","mmu-mir-5123|mu-mir-5123","microRNA 5123","ncRNA"]
["MACS_peak_188516","chr8",84197319,84198042,"+",209.62,"NA","Intergenic","CpG",-10838,"NR_029740",387216,null,"NR_029740","ENSMUSG00000065611","Mir23a","Mirn23a|mir-23a|mmu-mir-23a","microRNA 23a","ncRNA"]
["MACS_peak_115189","chr2",167731018,167731674,"+",209.09,"NA","Intergenic","Intergenic",40169,"NR_015500",329562,"Mm.123101","NM_177851","ENSMUSG00000006462","A530013C23Rik","-","RIKEN cDNA A530013C23 gene","ncRNA"]
["MACS_peak_135988","chr4",137931031,137931685,"+",208.78,"NA","intron (NM_199307, intron 5 of 19)","intron (NM_199307, intron 5 of 19)",-62098,"NM_001256198",230861,"Mm.268903","NM_172703","ENSMUSG00000028760","Eif4g3","1500002J22Rik|4833436O05|4930523M17Rik|G1-419-52|eIF4GII|repro8","eukaryotic translation initiation factor 4 gamma, 3","protein-coding"]
["MACS_peak_70972","chr15",101330358,101330958,"+",208.66,"NA","Intergenic","Intergenic",37446,"NR_033803",77717,"Mm.391998","NR_033803","ENSMUSG00000075408","6030408B16Rik","AI225877","RIKEN cDNA 6030408B16 gene","ncRNA"]
["MACS_peak_65790","chr15",79097592,79097966,"+",208.29,"NA","Intergenic","Intergenic",-11204,"NM_177461",27008,"Mm.196480","NM_177461","ENSMUSG00000033039","Micall1","AI448246|D15Mit260|D15N2e|EST573322|EST820961|MIRab13|mKIAA1668","microtubule associated monooxygenase, calponin and LIM domain containing -like 1","protein-coding"]
["MACS_peak_156948","chr5",142424716,142425449,"+",205.5,"NA","intron (NM_199068, intron 1 of 8)","intron (NM_199068, intron 1 of 8)",23585,"NM_199068",17425,"Mm.24214","NM_010812","ENSMUSG00000056493","Foxk1","A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf","forkhead box K1","protein-coding"]
["MACS_peak_99802","chr19",56934907,56935568,"+",205.49,"NA","intron (NM_001177796, intron 6 of 19)","intron (NM_001177796, intron 6 of 19)",60821,"NM_172840",240675,"Mm.129534","NM_172840","ENSMUSG00000025082","Vwa2","Amaco","von Willebrand factor A domain containing 2","protein-coding"]
["MACS_peak_47141","chr12",112128410,112128989,"+",204.56,"NA","Intergenic","Intergenic",-2181,"NR_029590",387199,null,"NR_029590","ENSMUSG00000065574","Mir203","Mirn203|mir-203|mmu-mir-203","microRNA 203","ncRNA"]
["MACS_peak_139600","chr4",150914176,150914800,"+",203.71,"NA","Intergenic","CpG",-4567,"NM_020569",57320,"Mm.277349","NM_020569","ENSMUSG00000028964","Park7","DJ-1|Dj1","Parkinson disease (autosomal recessive, early onset) 7","protein-coding"]
["MACS_peak_85787","chr17",56554008,56554644,"+",203.67,"NA","promoter-TSS (NR_130128)","promoter-TSS (NR_130128)",61,"NR_130128",100504425,"Mm.384143","NR_130128",null,"Gm20219","Tincr","predicted gene, 20219","ncRNA"]
["MACS_peak_125861","chr4",42949637,42950191,"+",203.42,"NA","Intergenic","CpG",-3180,"NM_019874",56323,"Mm.20437","NM_019874","ENSMUSG00000036052","Dnajb5","1110058L06Rik|AI462558|Hsc40|Hsp40-3","DnaJ (Hsp40) homolog, subfamily B, member 5","protein-coding"]
["MACS_peak_71458","chr15",103000538,103001028,"+",202.2,"NA","Intergenic","Intergenic",-8779,"NM_010465",15425,"Mm.4444","NM_010465","ENSMUSG00000001661","Hoxc6","Hox-3.3|Hox-6.1","homeobox C6","protein-coding"]
["MACS_peak_99233","chr19",53314173,53314615,"+",201.74,"NA","intron (NM_001008542, intron 1 of 5)","CpG",3888,"NM_001008542",17859,"Mm.2154","NM_010847","ENSMUSG00000025025","Mxi1","ENSMUSG00000067085|Gm10197|Mad2|bHLHc11","MAX interactor 1, dimerization protein","protein-coding"]
["MACS_peak_17934","chr10",82795123,82795754,"+",201.31,"NA","Intergenic","Intergenic",-16685,"NR_038042",70003,"Mm.48789","NR_038042","ENSMUSG00000056821","1700028I16Rik","-","RIKEN cDNA 1700028I16 gene","ncRNA"]
["MACS_peak_93446","chr18",82738021,82738641,"+",201.16,"NA","Intergenic","Intergenic",18050,"NR_039572",100628586,null,"NR_039572","ENSMUSG00000092638","Mir5112","mmu-mir-5112|mu-mir-5112","microRNA 5112","ncRNA"]
["MACS_peak_16690","chr10",80075014,80075456,"+",200.8,"NA","intron (NM_183426, intron 4 of 31)","intron (NM_183426, intron 4 of 31)",21216,"NM_001037741",625249,"Mm.332810","NM_008162","ENSMUSG00000075706","Gpx4","GPx-4|GSHPx-4|PHGPx|mtPHGPx|snGPx","glutathione peroxidase 4","protein-coding"]
["MACS_peak_132677","chr4",129231762,129232329,"+",200.67,"NA","intron (NM_001285867, intron 1 of 6)","intron (NM_001285867, intron 1 of 6)",-4134,"NM_001285866",97130,"Mm.331907","NM_001033189","ENSMUSG00000050390","C77080","Kiaa1522|mKIAA1522","expressed sequence C77080","protein-coding"]
["MACS_peak_104747","chr2",32914310,32914905,"+",200.57,"NA","intron (NM_146119, intron 5 of 13)","intron (NM_146119, intron 5 of 13)",38473,"NM_146119",227737,"Mm.301646","NM_146119","ENSMUSG00000026796","Fam129b","9130404D14Rik","family with sequence similarity 129, member B","protein-coding"]
["MACS_peak_42602","chr12",80115490,80116124,"+",199.92,"NA","Intergenic","CpG",-2794,"NM_007564",12192,"Mm.235132","NM_007564","ENSMUSG00000021127","Zfp36l1","AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1","zinc finger protein 36, C3H type-like 1","protein-coding"]
["MACS_peak_91044","chr18",60747600,60748133,"+",199.82,"NA","Intergenic","Intergenic",-26730,"NM_020600",20044,"Mm.43778","NM_020600","ENSMUSG00000024608","Rps14","2600014J02Rik|AL023078","ribosomal protein S14","protein-coding"]
["MACS_peak_32662","chr11",100288463,100289620,"+",199.37,"NA","Intergenic","Intergenic",-19170,"NM_212483",68239,"Mm.158190","NM_212483","ENSMUSG00000053654","Krt42","2410039E07Rik|K17n|Ka22|ecat6","keratin 42","protein-coding"]
["MACS_peak_205307","chr9",107305592,107306288,"+",199.29,"NA","Intergenic","Intergenic",9251,"NM_009895",12700,"Mm.4592","NM_009895",null,"Cish","AI385595|CIS1|Cis|F17|F23","cytokine inducible SH2-containing protein","protein-coding"]
["MACS_peak_169222","chr7",19327131,19327557,"+",198.33,"NA","Intergenic","Intergenic",-17299,"NM_008036",14282,"Mm.248335","NM_008036","ENSMUSG00000003545","Fosb","-","FBJ osteosarcoma oncogene B","protein-coding"]
["MACS_peak_171810","chr7",35128971,35129601,"+",197.99,"NA","Intergenic","Intergenic",9993,"NM_007678",12606,"Mm.349667","NM_007678","ENSMUSG00000034957","Cebpa","C/ebpalpha|CBF-A|Cebp","CCAAT/enhancer binding protein (C/EBP), alpha","protein-coding"]
["MACS_peak_141875","chr4",155894204,155894761,"+",197.78,"NA","intron (NM_207223, intron 1 of 23)","intron (NM_207223, intron 1 of 23)",2607,"NM_207223",140500,"Mm.219591","NM_207223","ENSMUSG00000029033","Acap3","Centb5|Kiaa1716-hp|mKIAA1716","ArfGAP with coiled-coil, ankyrin repeat and PH domains 3","protein-coding"]
["MACS_peak_119775","chr3",65974466,65975045,"+",197.69,"NA","Intergenic","CpG",-16530,"NM_019937",56706,"Mm.175612","NM_019937","ENSMUSG00000027829","Ccnl1","2610030E23Rik|AU018493|Ccnl|ania-6a","cyclin L1","protein-coding"]
["MACS_peak_3424","chr1",86503166,86503766,"+",197.23,"NA","Intergenic","Intergenic",-23270,"NM_008972",19231,"Mm.19187","NM_008972","ENSMUSG00000026238","Ptma","Thym","prothymosin alpha","protein-coding"]
["MACS_peak_138725","chr4",148712560,148713142,"+",195.49,"NA","Intergenic","Intergenic",69534,"NM_001085505",230909,"Mm.332067","NM_001085505","ENSMUSG00000070577","Gm572","b2b1167Clo","predicted gene 572","protein-coding"]
["MACS_peak_63359","chr15",68362354,68362864,"+",194.77,"NA","Intergenic","Intergenic",-21320,"NR_029718",387228,null,"NR_029718","ENSMUSG00000065437","Mir30d","Mirn30d|mir-30d|mmu-mir-30d","microRNA 30d","ncRNA"]
["MACS_peak_133984","chr4",133468127,133468462,"+",194.3,"NA","Intergenic","CpG",-11839,"NM_175307",100342,"Mm.204656","NM_175307","ENSMUSG00000046694","Fam46b","4732473B16Rik|AU045678|AU046069","family with sequence similarity 46, member B","protein-coding"]
["MACS_peak_39866","chr12",8778207,8778811,"+",194.05,"NA","intron (NM_011519, intron 1 of 4)","intron (NM_011519, intron 1 of 4)",7113,"NM_011519",20969,"Mm.2580","NM_011519","ENSMUSG00000020592","Sdc1","AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1","syndecan 1","protein-coding"]
["MACS_peak_1734","chr1",52113609,52114069,"+",193.57,"NA","Intergenic","CpG",-5599,"NM_009283",20846,"Mm.277406","NM_009283","ENSMUSG00000026104","Stat1","2010005J02Rik|AA408197","signal transducer and activator of transcription 1","protein-coding"]
["MACS_peak_43442","chr12",85485598,85486367,"+",193.2,"NA","Intergenic","Intergenic",12081,"NM_010234",14281,"Mm.246513","NM_010234","ENSMUSG00000021250","Fos","D12Rfj1|c-fos|cFos","FBJ osteosarcoma oncogene","protein-coding"]
["MACS_peak_80520","chr17",27142022,27142572,"+",193.08,"NA","Intergenic","Intergenic",-8406,"NM_026063",67267,"Mm.272389","NM_026063","ENSMUSG00000024208","Uqcc2","2900010M23Rik|Cbp6|M19|Mnf1","ubiquinol-cytochrome c reductase complex assembly factor 2","protein-coding"]
["MACS_peak_104496","chr2",32471665,32472029,"+",192.96,"NA","Intergenic","Intergenic",-20377,"NM_146118",227731,"Mm.37395","NM_146118","ENSMUSG00000026819","Slc25a25","1110030N17Rik|MCSC|mKIAA1896","solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25","protein-coding"]
["MACS_peak_205123","chr9",106357524,106358071,"+",192.94,"NA","Intergenic","Intergenic",-10835,"NM_153459",235584,"Mm.275584","NM_153459","ENSMUSG00000053716","Dusp7","AU015694|Mkpx|Pyst2","dual specificity phosphatase 7","protein-coding"]
["MACS_peak_156963","chr5",142439820,142440423,"+",192.34,"NA","intron (NM_199068, intron 2 of 8)","intron (NM_199068, intron 2 of 8)",-23810,"NM_172725",231855,"Mm.78250","NM_172725","ENSMUSG00000039623","Ap5z1","C330006K01Rik","adaptor-related protein complex 5, zeta 1 subunit","protein-coding"]
["MACS_peak_44167","chr12",99393404,99394015,"+",192.13,"NA","intron (NM_183186, intron 1 of 5)","intron (NM_183186, intron 1 of 5)",56365,"NM_183186",71375,"Mm.341972","NM_183186","ENSMUSG00000033713","Foxn3","5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1","forkhead box N3","protein-coding"]
["MACS_peak_120344","chr3",85970893,85971610,"+",191.02,"NA","Intergenic","CpG",31240,"NM_001001650",368202,"Mm.253822","NM_001001650","ENSMUSG00000049013","Prss48","Esspl|Gm1019","protease, serine 48","protein-coding"]
["MACS_peak_102675","chr2",28525445,28526228,"+",190.96,"NA","intron (NM_001145834, intron 1 of 17)","intron (NM_001145834, intron 1 of 17)",-7628,"NM_001145835",19730,"Mm.5236","NM_009058","ENSMUSG00000026821","Ralgds","Gnds|Rgds|mKIAA1308","ral guanine nucleotide dissociation stimulator","protein-coding"]
["MACS_peak_188524","chr8",84203756,84204343,"+",190.46,"NA","Intergenic","Intergenic",-4469,"NR_029740",387216,null,"NR_029740","ENSMUSG00000065611","Mir23a","Mirn23a|mir-23a|mmu-mir-23a","microRNA 23a","ncRNA"]
["MACS_peak_56910","chr14",34363504,34364057,"+",189.49,"NA","Intergenic","Intergenic",-8387,"NM_183278",69134,"Mm.27156","NM_183278","ENSMUSG00000043681","Fam25c","2200001I15Rik|Fam25","family with sequence similarity 25, member C","protein-coding"]
["MACS_peak_43152","chr12",84203692,84204205,"+",188.81,"NA","intron (NM_001163501, intron 1 of 12)","intron (NM_001163501, intron 1 of 12)",-9933,"NM_001163502",238317,"Mm.31256","NM_001163501","ENSMUSG00000042507","Elmsan1","9430029N19Rik|C130039O16Rik|Gm260","ELM2 and Myb/SANT-like domain containing 1","protein-coding"]
["MACS_peak_44166","chr12",99392905,99393398,"+",188.66,"NA","intron (NM_183186, intron 1 of 5)","CpG",56923,"NM_183186",71375,"Mm.341972","NM_183186","ENSMUSG00000033713","Foxn3","5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1","forkhead box N3","protein-coding"]
["MACS_peak_73980","chr16",26371360,26371919,"+",188.54,"NA","5' UTR (NM_016674, exon 1 of 4)","5' UTR (NM_016674, exon 1 of 4)",200,"NM_016674",12737,"Mm.289441","NM_016674","ENSMUSG00000022512","Cldn1","AI596271","claudin 1","protein-coding"]
["MACS_peak_168899","chr7",16845414,16845886,"+",188.34,"NA","intron (NM_001252458, intron 2 of 18)","intron (NM_001252458, intron 2 of 18)",2585,"NM_178900",101540,"Mm.1881","NM_178900","ENSMUSG00000041187","Prkd2","AI325941|PKD2","protein kinase D2","protein-coding"]
["MACS_peak_73375","chr16",18686901,18687345,"+",187.93,"NA","Intergenic","Intergenic",-57185,"NM_213614",18951,"Mm.20365","NM_213614","ENSMUSG00000072214","2005-09-01","Cdcrel-1|Cdcrel1|Pnutl1","septin 5","protein-coding"]
["MACS_peak_161960","chr6",83456493,83457379,"+",187.79,"NA","Intergenic","CpG",15181,"NR_028382",320775,"Mm.434334","NR_028382","ENSMUSG00000051844","B230319C09Rik","-","RIKEN cDNA B230319C09 gene","ncRNA"]
["MACS_peak_12016","chr10",20170307,20171051,"+",187.5,"NA","intron (NM_001198635, intron 1 of 17)","intron (NM_001198635, intron 1 of 17)",21759,"NM_001198635",17761,"Mm.20928","NM_008635","ENSMUSG00000019996","Map7","E-MAP-115|MAP-7|Mtap7|R75000|mshi|mste|ste","microtubule-associated protein 7","protein-coding"]
["MACS_peak_58795","chr14",63982854,63983553,"+",187.28,"NA","intron (NM_026359, intron 2 of 3)","intron (NM_026359, intron 2 of 3)",4577,"NM_026359",67750,"Mm.33864","NM_026359","ENSMUSG00000021961","4930578I06Rik","AI429111","RIKEN cDNA 4930578I06 gene","protein-coding"]
["MACS_peak_33601","chr11",103003162,103003689,"+",187.24,"NA","intron (NM_026551, intron 1 of 4)","intron (NM_026551, intron 1 of 4)",-3504,"NR_105896",102466988,null,"NR_105896","ENSMUSG00000098613","Mir6931","Gm27303|mmu-mir-6931","microRNA 6931","ncRNA"]
["MACS_peak_63132","chr15",61987631,61988354,"+",187.09,"NA","exon (NM_001177353, exon 2 of 3)","exon (NM_001177353, exon 2 of 3)",2651,"NM_001177352",17869,"Mm.2444","NM_010849","ENSMUSG00000022346","Myc","AU016757|Myc2|Niard|Nird|bHLHe39","myelocytomatosis oncogene","protein-coding"]
["MACS_peak_133924","chr4",133379026,133379517,"+",186.52,"NA","intron (NM_016981, intron 1 of 11)","intron (NM_016981, intron 1 of 11)",9495,"NR_039582",100628620,null,"NR_039582","ENSMUSG00000092745","Mir5122","mmu-mir-5122|mu-mir-5122","microRNA 5122","ncRNA"]
["MACS_peak_47575","chr12",112792802,112793447,"+",186.49,"NA","Intergenic","Intergenic",-15851,"NM_145450",217887,"Mm.186678","NM_145450","ENSMUSG00000037594","BC022687","AW050009|C130001I08Rik|Flj20080","cDNA sequence BC022687","protein-coding"]
["MACS_peak_125688","chr4",41063443,41064130,"+",186.28,"NA","Intergenic","Intergenic",-15650,"NM_007473",11832,"Mm.8728","NM_007473","ENSMUSG00000028427","Aqp7","AQP7L|AQPap","aquaporin 7","protein-coding"]
["MACS_peak_118659","chr3",32396897,32397528,"+",185.5,"NA","Intergenic","CpG",-31547,"NM_009517",22401,"Mm.35705","NM_009517","ENSMUSG00000027663","Zmat3","Wig1","zinc finger matrin type 3","protein-coding"]
["MACS_peak_100573","chr2",9877182,9877737,"+",185.05,"NA","exon (NM_008091, exon 2 of 6)","exon (NM_008091, exon 2 of 6)",1141,"NM_008091",14462,"Mm.313866","NM_008091","ENSMUSG00000015619","Gata3","Gata-3|jal","GATA binding protein 3","protein-coding"]
["MACS_peak_174954","chr7",73618419,73618991,"+",184.45,"NA","Intergenic","CpG",-60310,"NR_037569",69170,"Mm.34539","NR_037569","ENSMUSG00000098496","1810026B05Rik","-","RIKEN cDNA 1810026B05 gene","ncRNA"]
["MACS_peak_182815","chr7",143832018,143832606,"+",184.29,"NA","intron (NM_007856, intron 2 of 8)","intron (NM_007856, intron 2 of 8)",9145,"NM_007856",13360,"Mm.249342","NM_007856","ENSMUSG00000058454","Dhcr7","AA409147","7-dehydrocholesterol reductase","protein-coding"]
["MACS_peak_183568","chr8",4678255,4678842,"+",183.79,"NA","Intergenic","CpG",65378,"NM_145591",233987,"Mm.102799","NM_145591",null,"Zfp958","-","zinc finger protein 958","protein-coding"]
["MACS_peak_177007","chr7",99664447,99665089,"+",183.47,"NA","intron (NM_175316, intron 10 of 13)","intron (NM_175316, intron 10 of 13)",-23219,"NR_039544",100628570,null,"NR_039544","ENSMUSG00000093311","Mir3965","mmu-mir-3965|mu-mir-3965","microRNA 3965","ncRNA"]
["MACS_peak_34406","chr11",106666252,106666790,"+",183.31,"NA","intron (NM_001305158, intron 13 of 14)","MER20|DNA|hAT-Charlie",48760,"NM_001305158",18613,"Mm.343951","NM_008816","ENSMUSG00000020717","Pecam1","C85791|Cd31|PECAM-1|Pecam","platelet/endothelial cell adhesion molecule 1","protein-coding"]
["MACS_peak_198351","chr9",43128892,43129347,"+",183.12,"NA","intron (NM_011139, intron 10 of 12)","intron (NM_011139, intron 10 of 12)",-12549,"NM_001034863",235300,"Mm.261326","NM_001034863","ENSMUSG00000048503","Tmem136","AA396355|Gm184","transmembrane protein 136","protein-coding"]
["MACS_peak_2636","chr1",74298420,74299084,"+",182.04,"NA","intron (NM_027154, intron 1 of 11)","intron (NM_027154, intron 1 of 11)",5584,"NM_027154",69660,"Mm.261182","NM_027154","ENSMUSG00000006301","Tmbim1","2310061B02Rik|AA960455|AU024746|C78899|RECS1|Tmbib1|mKIAA4161","transmembrane BAX inhibitor motif containing 1","protein-coding"]
["MACS_peak_20080","chr10",126935274,126935746,"+",181.65,"NA","Intergenic","Intergenic",-34139,"NM_001159559",68876,"Mm.276769","NM_026858","ENSMUSG00000025436","Xrcc6bp1","1110068E08Rik|2410012H02Rik","XRCC6 binding protein 1","protein-coding"]
["MACS_peak_71860","chr16",5136040,5136802,"+",180.87,"NA","Intergenic","Intergenic",-3940,"NM_008909",19041,"Mm.266875","NM_008909","ENSMUSG00000039457","Ppl","AW553870","periplakin","protein-coding"]
["MACS_peak_81622","chr17",29154325,29155003,"+",180.68,"NA","Intergenic","Intergenic",19608,"NM_001002786",442827,"Mm.440341","NM_001002786","ENSMUSG00000064147","Rab44","9830134C10Rik","RAB44, member RAS oncogene family","protein-coding"]
["MACS_peak_101811","chr2",26553716,26554343,"+",180.34,"NA","Intergenic","Intergenic",-27027,"NM_178444",353156,"Mm.268933","NM_178444","ENSMUSG00000026921","Egfl7","VE-statin|Zneu1","EGF-like domain 7","protein-coding"]
["MACS_peak_141594","chr4",155129967,155130619,"+",180.28,"NA","intron (NM_001081100, intron 12 of 13)","intron (NM_001081100, intron 12 of 13)",43716,"NM_001081100",76866,"Mm.200590","NM_001081100","ENSMUSG00000029049","Morn1","2900057D20Rik|4930417P05Rik|AU042805","MORN repeat containing 1","protein-coding"]
["MACS_peak_198830","chr9",44480106,44480509,"+",179.93,"NA","Intergenic","Intergenic",-18829,"NM_030256",80288,"Mm.370270","NM_030256","ENSMUSG00000063382","Bcl9l","B9L|BC003321|BCL9-2|DLNB11","B cell CLL/lymphoma 9-like","protein-coding"]
["MACS_peak_197605","chr9",31279657,31280206,"+",179.66,"NA","Intergenic","Intergenic",8530,"NM_001101597",638580,"Mm.373655","NM_001101597",null,"Gm7244","EG638580","predicted gene 7244","protein-coding"]
["MACS_peak_71315","chr15",102255549,102256182,"+",179.21,"NA","intron (NM_011244, intron 2 of 9)","intron (NM_011244, intron 2 of 9)",1657,"NM_011244",19411,"Mm.1273","NM_011244","ENSMUSG00000001288","Rarg","Nr1b3|RAR-gamma|RARD|RARgamma2","retinoic acid receptor, gamma","protein-coding"]
["MACS_peak_188517","chr8",84198190,84198611,"+",179.02,"NA","Intergenic","Intergenic",-10118,"NR_029740",387216,null,"NR_029740","ENSMUSG00000065611","Mir23a","Mirn23a|mir-23a|mmu-mir-23a","microRNA 23a","ncRNA"]
["MACS_peak_54345","chr13",111772396,111772804,"+",178.59,"NA","exon (NM_011945, exon 3 of 20)","exon (NM_011945, exon 3 of 20)",36383,"NM_011945",26401,"Mm.15918","NM_011945","ENSMUSG00000021754","Map3k1","MAPKKK1|MEKK1|Mekk","mitogen-activated protein kinase kinase kinase 1","protein-coding"]
["MACS_peak_125082","chr4",11675629,11676276,"+",178.47,"NA","Intergenic","Intergenic",-28495,"NM_010276",14579,"Mm.247486","NM_010276","ENSMUSG00000028214","Gem","AV020497","GTP binding protein (gene overexpressed in skeletal muscle)","protein-coding"]
["MACS_peak_33316","chr11",102211351,102211818,"+",177.79,"NA","intron (NM_001077696, intron 3 of 26)","MIR3|SINE|MIR",18566,"NR_106179",102465892,null,"NR_106179","ENSMUSG00000098863","Mir8101","Gm27705|mmu-mir-8101","microRNA 8101","ncRNA"]
["MACS_peak_113733","chr2",164432504,164433079,"+",177.77,"NA","intron (NM_011521, intron 1 of 4)","intron (NM_011521, intron 1 of 4)",10397,"NM_011521",20971,"Mm.3815","NM_011521","ENSMUSG00000017009","Sdc4","AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4","syndecan 4","protein-coding"]
["MACS_peak_152867","chr5",124046712,124047255,"+",177.72,"NA","Intergenic","Intergenic",-14723,"NM_177876",330192,"Mm.4079","NM_177876","ENSMUSG00000066278","Vps37b","2300007F24Rik|AI415429|BC026744","vacuolar protein sorting 37B (yeast)","protein-coding"]
["MACS_peak_32665","chr11",100290885,100291552,"+",177.61,"NA","Intergenic","Intergenic",-21347,"NM_212483",68239,"Mm.158190","NM_212483","ENSMUSG00000053654","Krt42","2410039E07Rik|K17n|Ka22|ecat6","keratin 42","protein-coding"]
["MACS_peak_142362","chr5",23418269,23418723,"+",177.31,"NA","Intergenic","CpG",15857,"NR_040469",269630,"Mm.425231","NR_040469","ENSMUSG00000073147","5031425E22Rik","-","RIKEN cDNA 5031425E22 gene","ncRNA"]
["MACS_peak_94259","chr19",4720668,4721672,"+",176.66,"NA","intron (NM_021287, intron 2 of 36)","intron (NM_021287, intron 2 of 36)",9947,"NM_021287",20743,"Mm.329668","NM_021287","ENSMUSG00000067889","Sptbn2","Spnb3|mKIAA0302","spectrin beta, non-erythrocytic 2","protein-coding"]
["MACS_peak_115229","chr2",167776483,167776948,"+",176.65,"NA","Intergenic","MIR|SINE|MIR",85538,"NR_015500",329562,"Mm.123101","NM_177851","ENSMUSG00000006462","A530013C23Rik","-","RIKEN cDNA A530013C23 gene","ncRNA"]
["MACS_peak_47580","chr12",112796486,112797123,"+",175.61,"NA","Intergenic","Intergenic",-12171,"NM_145450",217887,"Mm.186678","NM_145450","ENSMUSG00000037594","BC022687","AW050009|C130001I08Rik|Flj20080","cDNA sequence BC022687","protein-coding"]
["MACS_peak_36245","chr11",115904728,115905386,"+",175.57,"NA","intron (NM_183259, intron 1 of 2)","intron (NM_183259, intron 1 of 2)",4918,"NM_183259",66528,"Mm.275740","NM_183259","ENSMUSG00000048442","Smim5","2210020M01Rik","small integral membrane protein 5","protein-coding"]
["MACS_peak_13458","chr10",59241867,59242372,"+",174.82,"NA","Intergenic","RMER13B|LTR|ERVK",20197,"NM_172939",268301,"Mm.3036","NM_172939","ENSMUSG00000098188","Sowahc","4921515A04Rik|9430099J10Rik|Ankrd57|C820004L04Rik","sosondowah ankyrin repeat domain family member C","protein-coding"]
["MACS_peak_178138","chr7",112247215,112247824,"+",174.73,"NA","intron (NM_001193305, intron 2 of 25)","intron (NM_001193305, intron 2 of 25)",21683,"NM_001193305",320878,"Mm.52312","NM_177282","ENSMUSG00000038244","Mical2","5330438E18Rik|9530064J02|MICAL-2|mKIAA0750","microtubule associated monooxygenase, calponin and LIM domain containing 2","protein-coding"]
["MACS_peak_131551","chr4",124798003,124798563,"+",174.69,"NA","exon (NM_008385, exon 22 of 24)","exon (NM_008385, exon 22 of 24)",-4266,"NM_008636",17764,"Mm.272397","NM_008636","ENSMUSG00000028890","Mtf1","MTF-1|Thyls","metal response element binding transcription factor 1","protein-coding"]
["MACS_peak_153344","chr5",125141359,125141893,"+",174.62,"NA","intron (NM_011424, intron 1 of 46)","intron (NM_011424, intron 1 of 46)",37588,"NM_001253905",20602,"Mm.278646","NM_011424","ENSMUSG00000029478","Ncor2","N-CoR|SMRT|SMRTe","nuclear receptor co-repressor 2","protein-coding"]
["MACS_peak_94732","chr19",5810499,5811295,"+",174.35,"NA","Intergenic","Intergenic",-8226,"NR_002847",72289,"Mm.298256","NR_002847","ENSMUSG00000092341","Malat1","2210401K01Rik|9430072K23Rik|AI647968|Neat2","metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)","ncRNA"]
["MACS_peak_55734","chr14",25599797,25600520,"+",174.32,"NA","intron (NM_001310666, intron 6 of 23)","intron (NM_001310666, intron 6 of 23)",-3355,"NM_001309430",100188919,"Mm.473810","NM_001309430",null,"Israa","-","immune system released activating agent","protein-coding"]
["MACS_peak_153337","chr5",125134771,125135187,"+",174.13,"NA","intron (NM_011424, intron 1 of 46)","intron (NM_011424, intron 1 of 46)",44235,"NM_001253905",20602,"Mm.278646","NM_011424","ENSMUSG00000029478","Ncor2","N-CoR|SMRT|SMRTe","nuclear receptor co-repressor 2","protein-coding"]
["MACS_peak_36454","chr11",116254020,116254453,"+",173.78,"NA","intron (NM_146032, intron 9 of 15)","intron (NM_146032, intron 9 of 15)",-16145,"NM_025276",14027,"Mm.293683","NM_025276","ENSMUSG00000034282","Evpl","-","envoplakin","protein-coding"]
["MACS_peak_134056","chr4",133613398,133614046,"+",173.39,"NA","intron (NM_001017968, intron 4 of 7)","intron (NM_001017968, intron 4 of 7)",-11554,"NM_018754",55948,"Mm.44482","NM_018754","ENSMUSG00000047281","Sfn","Er|Mme1|Ywhas","stratifin","protein-coding"]
["MACS_peak_93150","chr18",80608499,80609020,"+",173.36,"NA","intron (NM_198429, intron 9 of 9)","intron (NM_198429, intron 9 of 9)",-64213,"NR_028424",100039348,"Mm.254722","NR_028424",null,"Gm2176","A430076E10Rik","glucosamine-6-phosphate deaminase 1 pseudogene","pseudo"]
["MACS_peak_157156","chr5",142794369,142795068,"+",172.98,"NA","intron (NM_001122730, intron 2 of 27)","intron (NM_001122730, intron 2 of 27)",22669,"NM_178242",231861,"Mm.354649","NM_178242","ENSMUSG00000039477","Tnrc18","BC025631|EG381742|Zfp469","trinucleotide repeat containing 18","protein-coding"]
["MACS_peak_137256","chr4",140699439,140700043,"+",172.86,"NA","Intergenic","Intergenic",-1732,"NM_173867",108911,"Mm.253","NM_173867","ENSMUSG00000040945","Rcc2","2610510H01Rik|2610529N02Rik|AA536646|AA675016|Td60|mKIAA1470","regulator of chromosome condensation 2","protein-coding"]
["MACS_peak_154985","chr5",135892665,135893191,"+",172.63,"NA","Intergenic","Intergenic",5009,"NM_013560",15507,"Mm.13849","NM_013560","ENSMUSG00000004951","Hspb1","27kDa|Hsp25","heat shock protein 1","protein-coding"]
["MACS_peak_125048","chr4",11147252,11147760,"+",172.41,"NA","Intergenic","Intergenic",-8935,"NM_001199105",60599,"Mm.393018","NM_021897","ENSMUSG00000028211","Trp53inp1","2700057G22Rik|SIP|SIP18|SIP27|Stinp|Teap","transformation related protein 53 inducible nuclear protein 1","protein-coding"]
["MACS_peak_157588","chr5",144318323,144318957,"+",172.37,"NA","intron (NM_025833, intron 3 of 13)","intron (NM_025833, intron 3 of 13)",-39283,"NR_102374",100579137,null,"NR_102372","ENSMUSG00000104600","Dmr","-","Dmrt1 related","ncRNA"]
["MACS_peak_132494","chr4",128737809,128738303,"+",172.31,"NA","intron (NM_001195083, intron 1 of 6)","intron (NM_001195083, intron 1 of 6)",10485,"NM_001195083",54383,"Mm.473738","NM_018774","ENSMUSG00000028796","Phc2","A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36","polyhomeotic-like 2 (Drosophila)","protein-coding"]
["MACS_peak_162803","chr6",88074911,88075462,"+",172.1,"NA","Intergenic","Intergenic",-9287,"NM_133933",103963,"Mm.188544","NM_133933","ENSMUSG00000030062","Rpn1","AU018702|D6Wsu137e|Rpn-1","ribophorin I","protein-coding"]
["MACS_peak_57690","chr14",54574224,54574789,"+",172.08,"NA","intron (NM_010590, intron 1 of 7)","intron (NM_010590, intron 1 of 7)",3155,"NM_010590",16475,"Mm.100253","NM_010590","ENSMUSG00000022178","Ajuba","Jub","ajuba LIM protein","protein-coding"]
["MACS_peak_181753","chr7",139971494,139971976,"+",171.93,"NA","TTS (NM_001033465)","TTS (NM_001033465)",7020,"NM_001033465",381933,"Mm.389985","NM_001033465","ENSMUSG00000073795","6430531B16Rik","Gm1093","RIKEN cDNA 6430531B16 gene","protein-coding"]
["MACS_peak_124939","chr4",8876502,8876911,"+",171.61,"NA","Intergenic","Intergenic",186300,"NM_001277149",320790,"Mm.138792","NM_001033395","ENSMUSG00000041235","Chd7","A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis","chromodomain helicase DNA binding protein 7","protein-coding"]
["MACS_peak_81538","chr17",28930659,28931068,"+",171.61,"NA","Intergenic","Intergenic",11399,"NM_153390",69307,"Mm.107605","NM_153390",null,"Pxt1","1700001G18Rik|Stepp","peroxisomal, testis specific 1","protein-coding"]
["MACS_peak_15261","chr10",75647888,75648465,"+",171.14,"NA","exon (NM_172549, exon 35 of 37)","exon (NM_172549, exon 35 of 37)",-4168,"NM_027890",71733,"Mm.247956","NM_027890","ENSMUSG00000006342","Susd2","1200011D11Rik","sushi domain containing 2","protein-coding"]
["MACS_peak_70975","chr15",101332423,101333055,"+",171.06,"NA","Intergenic","Intergenic",-36613,"NR_035462",100316694,null,"NR_035462","ENSMUSG00000088459","Mir1941","mmu-mir-1941","microRNA 1941","ncRNA"]
["MACS_peak_69025","chr15",89177000,89177514,"+",170.74,"NA","intron (NM_138749, intron 1 of 37)","intron (NM_138749, intron 1 of 37)",-3306,"NM_001159521",140570,"Mm.267514","NM_138749","ENSMUSG00000036606","Plxnb2","Debt|plexin-B2","plexin B2","protein-coding"]
["MACS_peak_65619","chr15",78845860,78846410,"+",170.53,"NA","intron (NM_027219, intron 1 of 2)","intron (NM_027219, intron 1 of 2)",3488,"NM_027219",104445,"Mm.307488","NM_027219","ENSMUSG00000049521","Cdc42ep1","1810058K22Rik|AA980734|Borg5|CEP1|MSE55","CDC42 effector protein (Rho GTPase binding) 1","protein-coding"]
["MACS_peak_134058","chr4",133614861,133615522,"+",170.38,"NA","exon (NM_001017968, exon 3 of 8)","exon (NM_001017968, exon 3 of 8)",-13023,"NM_018754",55948,"Mm.44482","NM_018754","ENSMUSG00000047281","Sfn","Er|Mme1|Ywhas","stratifin","protein-coding"]
["MACS_peak_106814","chr2",72297695,72298100,"+",170.36,"NA","intron (NM_178084, intron 1 of 9)","intron (NM_178084, intron 1 of 9)",12196,"NM_178084",65964,"Mm.304143","NM_023057","ENSMUSG00000004085","Zak","AV006891|B230120H23Rik|MLTK|MLTKalpha|MLTKbeta","sterile alpha motif and leucine zipper containing kinase AZK","protein-coding"]
["MACS_peak_205128","chr9",106360957,106361400,"+",170.2,"NA","Intergenic","Intergenic",-7454,"NM_153459",235584,"Mm.275584","NM_153459","ENSMUSG00000053716","Dusp7","AU015694|Mkpx|Pyst2","dual specificity phosphatase 7","protein-coding"]
["MACS_peak_186794","chr8",69850869,69851510,"+",169.65,"NA","intron (NM_001024954, intron 1 of 7)","intron (NM_001024954, intron 1 of 7)",18485,"NM_001024954",80720,"Mm.210823","NM_030555","ENSMUSG00000031860","Pbx4","2410015M21Rik|AI429113|AW045266","pre B cell leukemia homeobox 4","protein-coding"]
["MACS_peak_195276","chr8",124087922,124088580,"+",169.53,"NA","Intergenic","Intergenic",64778,"NM_001029876",382038,"Mm.334891","NM_001029876","ENSMUSG00000031976","Urb2","C77575|mKIAA0133","URB2 ribosome biogenesis 2 homolog (S. cerevisiae)","protein-coding"]
["MACS_peak_175524","chr7",80191259,80191879,"+",169.47,"NA","intron (NM_013659, intron 1 of 14)","intron (NM_013659, intron 1 of 14)",4728,"NM_013659",20352,"Mm.275909","NM_013659","ENSMUSG00000030539","Sema4b","SemC|Semac|mKIAA1745","sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B","protein-coding"]
["MACS_peak_85785","chr17",56552632,56553095,"+",169.3,"NA","non-coding (NR_130128, exon 3 of 4)","non-coding (NR_130128, exon 3 of 4)",1524,"NR_130128",100504425,"Mm.384143","NR_130128",null,"Gm20219","Tincr","predicted gene, 20219","ncRNA"]
["MACS_peak_37090","chr11",117333909,117334511,"+",169.14,"NA","intron (NM_001113488, intron 1 of 9)","intron (NM_001113488, intron 1 of 9)",1897,"NM_001113488",53860,"Mm.38450","NM_017380","ENSMUSG00000059248","2009-09-01","MSF1|Msf|PNUTL4|Sint1","septin 9","protein-coding"]
["MACS_peak_70970","chr15",101328204,101328640,"+",168.55,"NA","Intergenic","Intergenic",35210,"NR_033803",77717,"Mm.391998","NR_033803","ENSMUSG00000075408","6030408B16Rik","AI225877","RIKEN cDNA 6030408B16 gene","ncRNA"]
["MACS_peak_134051","chr4",133607068,133607777,"+",168.48,"NA","3' UTR (NM_001017968, exon 8 of 8)","3' UTR (NM_001017968, exon 8 of 8)",-5254,"NM_018754",55948,"Mm.44482","NM_018754","ENSMUSG00000047281","Sfn","Er|Mme1|Ywhas","stratifin","protein-coding"]
["MACS_peak_127394","chr4",57156647,57157138,"+",168.39,"NA","Intergenic","Intergenic",-13736,"NM_019427",54357,"Mm.28217","NM_019427","ENSMUSG00000028434","Epb41l4b","6430543G08Rik|AA589614|AU021054|BB007528|D4Ertd346e|Ehm2|Epb4.1l4b|Lulu2","erythrocyte membrane protein band 4.1 like 4b","protein-coding"]
["MACS_peak_196093","chr8",126685214,126685736,"+",168.3,"NA","Intergenic","Intergenic",-92039,"NM_001164598",270110,"Mm.334918","NM_001164598","ENSMUSG00000051495","Irf2bp2","E130305N23Rik|IRF-2BP2","interferon regulatory factor 2 binding protein 2","protein-coding"]
["MACS_peak_114327","chr2",165820443,165821392,"+",168.06,"NA","intron (NM_001291158, intron 12 of 23)","intron (NM_001291158, intron 12 of 23)",37256,"NM_001252585",228880,"Mm.227598","NM_027230","ENSMUSG00000039671","Zmynd8","1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7","zinc finger, MYND-type containing 8","protein-coding"]
["MACS_peak_49453","chr13",42049427,42049902,"+",167.94,"NA","Intergenic","CpG",-2357,"NM_007772",110521,"Mm.4808","NM_007772","ENSMUSG00000021366","Hivep1","Cryabp1","human immunodeficiency virus type I enhancer binding protein 1","protein-coding"]
["MACS_peak_74251","chr16",30596925,30597378,"+",167.33,"NA","Intergenic","Intergenic",-2572,"NM_177632",224093,"Mm.28244","NM_177632","ENSMUSG00000046546","Fam43a","Tuf1","family with sequence similarity 43, member A","protein-coding"]
["MACS_peak_171544","chr7",31208238,31208687,"+",167.08,"NA","Intergenic","CpG",46104,"NR_046062",100038516,"Mm.387223","NR_046062","ENSMUSG00000100985","Gm10640","EG668322|ENSMUSG00000074193","predicted gene 10640","ncRNA"]
["MACS_peak_32710","chr11",100386201,100386933,"+",166.89,"NA","intron (NM_010593, intron 1 of 13)","intron (NM_010593, intron 1 of 13)",11223,"NM_010593",16480,"Mm.299774","NM_010593","ENSMUSG00000001552","Jup","Ctnng|D930025P04Rik|PG","junction plakoglobin","protein-coding"]
["MACS_peak_144043","chr5",34535842,34536479,"+",166.14,"NA","intron (NM_011893, intron 1 of 12)","intron (NM_011893, intron 1 of 12)",-7205,"NM_001145858",24055,"Mm.5012","NM_011893","ENSMUSG00000054520","Sh3bp2","3BP2","SH3-domain binding protein 2","protein-coding"]
["MACS_peak_42444","chr12",78911660,78912123,"+",165.53,"NA","Intergenic","Intergenic",-4953,"NM_013738",27260,"Mm.103380","NM_013738","ENSMUSG00000021118","Plek2","-","pleckstrin 2","protein-coding"]
["MACS_peak_6349","chr1",131751091,131751617,"+",165.4,"NA","intron (NM_177243, intron 2 of 20)","intron (NM_177243, intron 2 of 20)",7332,"NM_177243",320718,"Mm.482704","NM_177243","ENSMUSG00000042268","Slc26a9","E030002L01Rik","solute carrier family 26, member 9","protein-coding"]
["MACS_peak_29090","chr11",79703990,79704472,"+",164.92,"NA","Intergenic","CpG",-7738,"NR_029579",387188,null,"NR_029579","ENSMUSG00000065395","Mir193a","Mir193|Mirn193|mir-193a|mmu-mir-193|mmu-mir-193a","microRNA 193a","ncRNA"]
["MACS_peak_14811","chr10",68136401,68136924,"+",164.92,"NA","intron (NM_023598, intron 4 of 9)","intron (NM_023598, intron 4 of 9)",142064,"NM_023598",71371,"Mm.440357","NM_023598","ENSMUSG00000019947","Arid5b","4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta","AT rich interactive domain 5B (MRF1-like)","protein-coding"]
["MACS_peak_179930","chr7",127691490,127691975,"+",164.78,"NA","Intergenic","Intergenic",-16755,"NR_030428",791073,null,"NR_030428","ENSMUSG00000076454","Mir762","Mirn762|mir-762|mmu-mir-762","microRNA 762","ncRNA"]
["MACS_peak_95000","chr19",6308321,6308850,"+",164.6,"NA","intron (NM_001033342, intron 1 of 36)","intron (NM_001033342, intron 1 of 36)",2128,"NM_001033342",240505,"Mm.329622","NM_001033342","ENSMUSG00000024769","Cdc42bpg","BC046418|MRCKgamma","CDC42 binding protein kinase gamma (DMPK-like)","protein-coding"]
["MACS_peak_197944","chr9",37248343,37248885,"+",164.46,"NA","intron (NM_001145960, intron 1 of 18)","intron (NM_001145960, intron 1 of 18)",7124,"NM_020258",56857,"Mm.440037","NM_020258","ENSMUSG00000032122","Slc37a2","G3PP|Slc37a1|cI-2|ci2","solute carrier family 37 (glycerol-3-phosphate transporter), member 2","protein-coding"]
["MACS_peak_95691","chr19",9106248,9106866,"+",164.32,"NA","Intergenic","Intergenic",-18601,"NM_011681",22287,"Mm.2258","NM_011681","ENSMUSG00000024653","Scgb1a1","CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg","secretoglobin, family 1A, member 1 (uteroglobin)","protein-coding"]
["MACS_peak_28309","chr11",76478724,76479544,"+",164.27,"NA","exon (NM_198895, exon 4 of 23)","exon (NM_198895, exon 4 of 23)",-10669,"NM_001291186",109934,"Mm.258939","NM_198018","ENSMUSG00000017631","Abr","-","active BCR-related gene","protein-coding"]
["MACS_peak_143544","chr5",32120876,32121331,"+",163.94,"NA","Intergenic","Intergenic",-15369,"NM_008037",14284,"Mm.24684","NM_008037","ENSMUSG00000029135","Fosl2","Fra-2","fos-like antigen 2","protein-coding"]
["MACS_peak_53695","chr13",98296527,98297044,"+",163.82,"NA","Intergenic","MLTR11B|LTR|ERVK",20182,"NM_145455",218490,"Mm.371688","NM_145455","ENSMUSG00000021660","Btf3","1700054E11Rik","basic transcription factor 3","protein-coding"]
["MACS_peak_94734","chr19",5817700,5818251,"+",163.44,"NA","Intergenic","Intergenic",-15304,"NR_002847",72289,"Mm.298256","NR_002847","ENSMUSG00000092341","Malat1","2210401K01Rik|9430072K23Rik|AI647968|Neat2","metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)","ncRNA"]
["MACS_peak_161522","chr6",72551068,72551574,"+",162.23,"NA","intron (NM_001271395, intron 1 of 9)","intron (NM_001271395, intron 1 of 9)",1674,"NM_001271395",12332,"Mm.18626","NM_007599","ENSMUSG00000056737","Capg","gCap39|mbh1","capping protein (actin filament), gelsolin-like","protein-coding"]
["MACS_peak_7600","chr1",135943598,135944232,"+",162.06,"NA","Intergenic","Intergenic",-24708,"NM_019645",18772,"Mm.4494","NM_019645","ENSMUSG00000026413","Pkp1","-","plakophilin 1","protein-coding"]
["MACS_peak_125701","chr4",41093332,41093706,"+",161.5,"NA","3' UTR (NM_016689, exon 6 of 6)","3' UTR (NM_016689, exon 6 of 6)",4664,"NM_016689",11828,"Mm.34043","NM_016689","ENSMUSG00000028435","Aqp3","AQP-2","aquaporin 3","protein-coding"]
["MACS_peak_131661","chr4",125116120,125116614,"+",161.36,"NA","Intergenic","Intergenic",11514,"NM_153159",230738,"Mm.402","NM_153159","ENSMUSG00000042677","Zc3h12a","BC036563|MCPIP|Mcpip1","zinc finger CCCH type containing 12A","protein-coding"]
["MACS_peak_80528","chr17",27154079,27154694,"+",160.72,"NA","intron (NM_173027, intron 2 of 5)","intron (NM_173027, intron 2 of 5)",13378,"NM_173027",271424,"Mm.209679","NM_173027","ENSMUSG00000024210","Ip6k3","D830007E07Rik|Ihpk3","inositol hexaphosphate kinase 3","protein-coding"]
["MACS_peak_41639","chr12",69422890,69423465,"+",160.64,"NA","Intergenic","Intergenic",51027,"NM_007481",11845,"Mm.27308","NM_007481","ENSMUSG00000044147","Arf6","AI788669|AW496366","ADP-ribosylation factor 6","protein-coding"]
["MACS_peak_36982","chr11",117206043,117207063,"+",160.51,"NA","intron (NM_001113486, intron 1 of 11)","intron (NM_001113486, intron 1 of 11)",6892,"NM_001113486",53860,"Mm.38450","NM_017380","ENSMUSG00000059248","2009-09-01","MSF1|Msf|PNUTL4|Sint1","septin 9","protein-coding"]
["MACS_peak_7717","chr1",136230149,136230632,"+",160.11,"NA","intron (NM_028872, intron 1 of 9)","intron (NM_028872, intron 1 of 9)",3890,"NM_028872",67313,"Mm.36763","NM_028872","ENSMUSG00000041605","5730559C18Rik","1700034M08Rik|4933426C09Rik|AI586180|D1Mgi54","RIKEN cDNA 5730559C18 gene","protein-coding"]
["MACS_peak_85784","chr17",56550992,56551461,"+",159.56,"NA","TTS (NR_130128)","TTS (NR_130128)",3161,"NR_130128",100504425,"Mm.384143","NR_130128",null,"Gm20219","Tincr","predicted gene, 20219","ncRNA"]
["MACS_peak_29793","chr11",84882412,84882811,"+",159.33,"NA","5' UTR (NM_025414, exon 2 of 25)","5' UTR (NM_025414, exon 2 of 25)",-2326,"NM_001077636",70325,"Mm.390414","NM_027388","ENSMUSG00000045140","Pigw","2610044A17Rik|Gwt1","phosphatidylinositol glycan anchor biosynthesis, class W","protein-coding"]
["MACS_peak_138770","chr4",148797319,148797897,"+",159.21,"NA","Intergenic","Intergenic",-6784,"NM_001159344",69743,"Mm.233879","NM_027195","ENSMUSG00000028977","Casz1","2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e","castor zinc finger 1","protein-coding"]
["MACS_peak_188833","chr8",84980082,84980557,"+",159.11,"NA","Intergenic","CpG",-1571,"NM_008416",16477,"Mm.1167","NM_008416","ENSMUSG00000052837","Junb","-","jun B proto-oncogene","protein-coding"]
["MACS_peak_166633","chr6",125256675,125257213,"+",158.93,"NA","Intergenic","Intergenic",-8581,"NR_015527",73870,"Mm.440681","NR_015527","ENSMUSG00000108129","4930417O13Rik","-","RIKEN cDNA 4930417O13 gene","ncRNA"]
["MACS_peak_85941","chr17",56819706,56820196,"+",158.93,"NA","intron (NM_027787, intron 1 of 17)","intron (NM_027787, intron 1 of 17)",11057,"NM_009056",19725,"Mm.102","NM_009056","ENSMUSG00000024206","Rfx2","5430432H19Rik","regulatory factor X, 2 (influences HLA class II expression)","protein-coding"]
["MACS_peak_67123","chr15",83157057,83157543,"+",158.88,"NA","intron (NM_029787, intron 8 of 8)","intron (NM_029787, intron 8 of 8)",7655,"NR_004432",104307,"Mm.471434","NR_004432","ENSMUSG00000065176","Rnu12","-","RNA U12, small nuclear","snRNA"]
["MACS_peak_119300","chr3",52045989,52046516,"+",158.38,"NA","intron (NM_001004176, intron 1 of 4)","intron (NM_001004176, intron 1 of 4)",58754,"NM_001004176",433586,"Mm.234972","NM_001004176","ENSMUSG00000061143","Maml3","AV234550|BC049812|Mam-2|mKIAA1816","mastermind like 3 (Drosophila)","protein-coding"]
["MACS_peak_86114","chr17",57275021,57275477,"+",158.1,"NA","Intergenic","CpG",-3851,"NM_001163816",22324,"Mm.248172","NM_011691",null,"Vav1","Vav|vav-T","vav 1 oncogene","protein-coding"]
["MACS_peak_94731","chr19",5809812,5810262,"+",157.6,"NA","Intergenic","Intergenic",-7366,"NR_002847",72289,"Mm.298256","NR_002847","ENSMUSG00000092341","Malat1","2210401K01Rik|9430072K23Rik|AI647968|Neat2","metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)","ncRNA"]
["MACS_peak_123088","chr3",108772137,108772580,"+",157.39,"NA","intron (NM_177859, intron 7 of 11)","intron (NM_177859, intron 7 of 11)",32700,"NM_177859",329738,"Mm.72322","NM_177859","ENSMUSG00000049565","Aknad1","4921525H12Rik","AKNA domain containing 1","protein-coding"]
["MACS_peak_135677","chr4",137283091,137283611,"+",157.37,"NA","intron (NM_009523, intron 1 of 4)","intron (NM_009523, intron 1 of 4)",5716,"NM_009523",22417,"Mm.20355","NM_009523","ENSMUSG00000036856","Wnt4","Wnt-4","wingless-type MMTV integration site family, member 4","protein-coding"]
["MACS_peak_16913","chr10",80344797,80345196,"+",157.08,"NA","intron (NR_104339, intron 5 of 11)","intron (NR_104339, intron 5 of 11)",3452,"NM_001285435",66548,"Mm.71891","NM_025629","ENSMUSG00000043822","Adamtsl5","2010109H09Rik|Thsd6","ADAMTS-like 5","protein-coding"]
["MACS_peak_83546","chr17",35697441,35698003,"+",157.01,"NA","intron (NM_007584, intron 1 of 17)","intron (NM_007584, intron 1 of 17)",2868,"NM_001198833",12305,"Mm.5021","NM_007584","ENSMUSG00000003534","Ddr1","6030432F18|AI323681|CD167a|Cak|Nep|PTK3A","discoidin domain receptor family, member 1","protein-coding"]
["MACS_peak_10118","chr1",182088982,182089527,"+",156.97,"NA","Intergenic","Intergenic",-35483,"NM_012058",27058,"Mm.273196","NM_012058","ENSMUSG00000026511","Srp9","9kDa","signal recognition particle 9","protein-coding"]
["MACS_peak_167898","chr6",145340605,145341097,"+",156.28,"NA","Intergenic","CpG",-46774,"NR_003625",381827,"Mm.179075","NM_001001987",null,"1700073E17Rik","-","ribosomal protein L7 pseudogene","pseudo"]
["MACS_peak_7558","chr1",135820758,135821159,"+",156.23,"NA","intron (NM_133664, intron 1 of 9)","intron (NM_133664, intron 1 of 9)",2360,"NM_133664",16763,"Mm.36726","NM_133664","ENSMUSG00000041782","Lad1","-","ladinin","protein-coding"]
["MACS_peak_71189","chr15",101966257,101966674,"+",156.22,"NA","Intergenic","Intergenic",-12178,"NM_212487",332131,"Mm.325105","NM_212487","ENSMUSG00000050463","Krt78","2310030B04Rik|Kb40","keratin 78","protein-coding"]
["MACS_peak_31717","chr11",97434754,97435380,"+",155.8,"NA","Intergenic","Intergenic",-15093,"NM_021493",58996,"Mm.394118","NM_021493","ENSMUSG00000049807","Arhgap23","A330041B18Rik","Rho GTPase activating protein 23","protein-coding"]
["MACS_peak_138785","chr4",148823158,148823608,"+",155.52,"NA","intron (NM_001159344, intron 1 of 20)","intron (NM_001159344, intron 1 of 20)",18991,"NM_027195",69743,"Mm.233879","NM_027195","ENSMUSG00000028977","Casz1","2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e","castor zinc finger 1","protein-coding"]
["MACS_peak_103454","chr2",30554032,30554447,"+",155.43,"NA","Intergenic","Intergenic",-40805,"NM_030137",78617,"Mm.40413","NM_030137","ENSMUSG00000047363","Cstad","9530039B02Rik","CSA-conditional, T cell activation-dependent protein","protein-coding"]
["MACS_peak_120594","chr3",87910592,87910966,"+",155.28,"NA","intron (NM_008231, intron 1 of 5)","intron (NM_008231, intron 1 of 5)",4458,"NM_008231",15191,"Mm.292208","NM_008231","ENSMUSG00000004897","Hdgf","AI118077|D3Ertd299e","hepatoma-derived growth factor","protein-coding"]
["MACS_peak_80434","chr17",27039986,27040592,"+",155.03,"NA","Intergenic","Intergenic",11030,"NM_027544",70772,"Mm.440437","NM_027544","ENSMUSG00000048731","Ggnbp1","0610031G08Rik|mdf","gametogenetin binding protein 1","protein-coding"]
["MACS_peak_108539","chr2",103661784,103662399,"+",154.47,"NA","intron (NM_178890, intron 1 of 16)","intron (NM_178890, intron 1 of 16)",95781,"NM_178890",99382,"Mm.35850","NM_178890","ENSMUSG00000032724","Abtb2","AW539457|BPOZ-2","ankyrin repeat and BTB (POZ) domain containing 2","protein-coding"]
["MACS_peak_49238","chr13",38312069,38312598,"+",154.32,"NA","Intergenic","Intergenic",-33383,"NM_007556",12161,"Mm.385759","NM_007556","ENSMUSG00000039004","Bmp6","D13Wsu115e|Vgr1","bone morphogenetic protein 6","protein-coding"]
["MACS_peak_46960","chr12",111704391,111705037,"+",154.29,"NA","Intergenic","Intergenic",8542,"NM_027404",70369,"Mm.44239","NM_027404","ENSMUSG00000049792","Bag5","1600025G07Rik|4930405J06Rik","BCL2-associated athanogene 5","protein-coding"]
["MACS_peak_127392","chr4",57153394,57154004,"+",153.64,"NA","Intergenic","Intergenic",-10543,"NM_019427",54357,"Mm.28217","NM_019427","ENSMUSG00000028434","Epb41l4b","6430543G08Rik|AA589614|AU021054|BB007528|D4Ertd346e|Ehm2|Epb4.1l4b|Lulu2","erythrocyte membrane protein band 4.1 like 4b","protein-coding"]
["MACS_peak_78893","chr17",21532259,21532716,"+",153.51,"NA","intron (NR_131123, intron 2 of 2)","CpG",-3052,"NM_144515",22710,"Mm.296100","NM_144515",null,"Zfp52","KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29","zinc finger protein 52","protein-coding"]
["MACS_peak_99825","chr19",56990304,56990769,"+",153.45,"NA","intron (NM_146102, intron 1 of 20)","intron (NM_146102, intron 1 of 20)",18039,"NM_146102",226250,"Mm.226284","NM_146102","ENSMUSG00000025083","Afap1l2","AU041783|C86904|mKIAA1914","actin filament associated protein 1-like 2","protein-coding"]
["MACS_peak_82242","chr17",31066945,31067436,"+",153,"NA","intron (NM_009593, intron 2 of 14)","intron (NM_009593, intron 2 of 14)",9496,"NM_009593",11307,"Mm.15691","NM_009593",null,"Abcg1","AW413978|Abc8|White","ATP-binding cassette, sub-family G (WHITE), member 1","protein-coding"]
["MACS_peak_56479","chr14",31662178,31662699,"+",152.78,"NA","intron (NM_025295, intron 2 of 3)","intron (NM_025295, intron 2 of 3)",21381,"NM_025295",26363,"Mm.282679","NM_025295","ENSMUSG00000021900","Btd","-","biotinidase","protein-coding"]
["MACS_peak_99877","chr19",57238263,57238798,"+",152.22,"NA","Intergenic","Intergenic",-22498,"NM_178688",226251,"Mm.217161","NM_178688","ENSMUSG00000025085","Ablim1","2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059","actin-binding LIM protein 1","protein-coding"]
["MACS_peak_51686","chr13",56433371,56433859,"+",152.09,"NA","Intergenic","Intergenic",-4740,"NM_177809",328258,"Mm.482177","NM_177809",null,"Slc25a48","AU042651|E230025K15","solute carrier family 25, member 48","protein-coding"]
["MACS_peak_173856","chr7",49400976,49401433,"+",151.94,"NA","intron (NM_001111016, intron 5 of 38)","intron (NM_001111016, intron 5 of 38)",155015,"NM_175272",78286,"Mm.333881","NM_175272","ENSMUSG00000052512","Nav2","5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015","neuron navigator 2","protein-coding"]
["MACS_peak_94988","chr19",6297387,6297890,"+",151.9,"NA","exon (NM_010119, exon 4 of 5)","exon (NM_010119, exon 4 of 5)",-8819,"NM_001033342",240505,"Mm.329622","NM_001033342","ENSMUSG00000024769","Cdc42bpg","BC046418|MRCKgamma","CDC42 binding protein kinase gamma (DMPK-like)","protein-coding"]
["MACS_peak_139530","chr4",150707375,150707750,"+",151.81,"NA","Intergenic","Intergenic",-55388,"NM_173774",242773,"Mm.29280","NM_173774",null,"Slc45a1","C230078B22|Dnb5","solute carrier family 45, member 1","protein-coding"]
["MACS_peak_50157","chr13",48878431,48878889,"+",151.68,"NA","TTS (NM_001033268)","TTS (NM_001033268)",-7775,"NM_011078",18676,"Mm.486213","NM_011078","ENSMUSG00000038025","Phf2","GRC5","PHD finger protein 2","protein-coding"]
["MACS_peak_196083","chr8",126667056,126667415,"+",151.61,"NA","Intergenic","Intergenic",-73799,"NM_001164598",270110,"Mm.334918","NM_001164598","ENSMUSG00000051495","Irf2bp2","E130305N23Rik|IRF-2BP2","interferon regulatory factor 2 binding protein 2","protein-coding"]
["MACS_peak_17521","chr10",81146418,81146877,"+",151.19,"NA","intron (NM_010731, intron 2 of 2)","intron (NM_010731, intron 2 of 2)",10376,"NM_010731",16969,"Mm.20920","NM_010731","ENSMUSG00000035011","Zbtb7a","9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7","zinc finger and BTB domain containing 7a","protein-coding"]
["MACS_peak_20077","chr10",126928365,126928952,"+",151.17,"NA","Intergenic","Intergenic",-27287,"NM_001159559",68876,"Mm.276769","NM_026858","ENSMUSG00000025436","Xrcc6bp1","1110068E08Rik|2410012H02Rik","XRCC6 binding protein 1","protein-coding"]
["MACS_peak_11163","chr1",191989939,191990414,"+",150.99,"NA","Intergenic","Intergenic",8458,"NR_039566",100628582,null,"NR_039566","ENSMUSG00000093003","Mir3473c","mmu-mir-3473c","microRNA 3473c","ncRNA"]
["MACS_peak_131667","chr4",125123065,125123444,"+",150.93,"NA","intron (NM_153159, intron 2 of 5)","intron (NM_153159, intron 2 of 5)",4627,"NM_153159",230738,"Mm.402","NM_153159","ENSMUSG00000042677","Zc3h12a","BC036563|MCPIP|Mcpip1","zinc finger CCCH type containing 12A","protein-coding"]
["MACS_peak_5198","chr1",93704409,93704916,"+",150.83,"NA","TTS (NM_025920)","TTS (NM_025920)",19087,"NM_016778",51800,"Mm.3295","NM_016778","ENSMUSG00000026278","Bok","matador|mtd","BCL2-related ovarian killer","protein-coding"]

{"sheet":"2_promoters bound by Dnmt3a","index":1,"n_rows":3523,"n_cols":19,"rows_kept":3523,"read":"bin_record_odd","flags":["formulas_cached_only"]}
["PeakID (cmd=annotatePeaks.pl Dnmt3a_u_mm10_TSS_peaks.bed mm10)","Chr","Start","End","Strand","Peak Score","Focus Ratio/Region Size","Annotation","Detailed Annotation","Distance to TSS","Nearest PromoterID","Entrez ID","Nearest Unigene","Nearest Refseq","Nearest Ensembl","Gene Name","Gene Alias","Gene Description","Gene Type"]
[127,"chr1",138963147,138964041,"+",0,"NA","promoter-TSS (NM_001166501)","promoter-TSS (NM_001166501)",-115,"NM_001166501",329260,"Mm.337604","NM_181347","ENSMUSG00000056268","Dennd1b","4632404N19Rik|4930467M19Rik|6820401H01Rik|F730008N07Rik","DENN/MADD domain containing 1B","protein-coding"]
[1801,"chr2",25402891,25403582,"+",0,"NA","5' UTR (NM_008721, exon 1 of 9)","5' UTR (NM_008721, exon 1 of 9)",186,"NM_008721",18146,"Mm.1131","NM_008721","ENSMUSG00000015094","Npdc1","AI314472|NPDC-1","neural proliferation, differentiation and control 1","protein-coding"]
[71,"chr1",86303060,86304060,"+",0,"NA","intron (NM_145222, intron 1 of 1)","CpG",339,"NM_145222",227327,"Mm.86467","NM_145222","ENSMUSG00000079445","B3gnt7","C330001H22Rik|beta-3GnT7","UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7","protein-coding"]
[1648,"chr19",5651169,5651812,"+",0,"NA","exon (NM_011379, exon 17 of 17)","exon (NM_011379, exon 17 of 17)",12217,"NM_001164482",20469,"Mm.3072","NM_011379","ENSMUSG00000056917","Sipa1","Spa1","signal-induced proliferation associated gene 1","protein-coding"]
[1481,"chr17",49614937,49615615,"+",0,"NA","exon (NM_177052, exon 1 of 23)","exon (NM_177052, exon 1 of 23)",104,"NM_177052",319991,"Mm.441340","NM_177052","ENSMUSG00000023999","Kif6","D130004B10Rik|D130084M03Rik","kinesin family member 6","protein-coding"]
[3074,"chr7",140137433,140138007,"+",0,"NA","exon (NM_199301, exon 1 of 11)","exon (NM_199301, exon 1 of 11)",156,"NM_199301",212508,"Mm.296088","NM_199301","ENSMUSG00000039018","Mtg1","Gm169|Gtpbp7","mitochondrial GTPase 1 homolog (S. cerevisiae)","protein-coding"]
[3509,"chr9",123112692,123113495,"+",0,"NA","promoter-TSS (NM_001081188)","promoter-TSS (NM_001081188)",112,"NM_026917",69035,"Mm.28300","NM_026917",null,"Zdhhc3","1110020O22Rik|1810006O10Rik|2210017C02Rik|DHHC-3|GODZ|Gramp1|Zfp373","zinc finger, DHHC domain containing 3","protein-coding"]
[2927,"chr7",45163724,45164410,"+",0,"NA","5' UTR (NM_182993, exon 1 of 12)","5' UTR (NM_182993, exon 1 of 12)",146,"NM_182993",72961,"Mm.255631","NM_182993","ENSMUSG00000070570","Slc17a7","2900052E22Rik|AI851913|Vglut1","solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7","protein-coding"]
[2266,"chr4",45798854,45799523,"+",0,"NA","intron (NM_028270, intron 1 of 1)","CpG",166,"NM_028270",72535,"Mm.331583","NM_028270","ENSMUSG00000035561","Aldh1b1","2700007F14Rik","aldehyde dehydrogenase 1 family, member B1","protein-coding"]
[3163,"chr8",70302103,70303009,"+",0,"NA","promoter-TSS (NM_001024922)","promoter-TSS (NM_001024922)",-104,"NM_001024922",234374,"Mm.388127","NM_001024922","ENSMUSG00000057788","Ddx49","R27090_2","DEAD (Asp-Glu-Ala-Asp) box polypeptide 49","protein-coding"]
[1178,"chr15",82274881,82275798,"+",0,"NA","intron (NM_011889, intron 1 of 9)","G-rich|Low_complexity|Low_complexity",404,"NM_011889",24050,"Mm.309707","NM_011889","ENSMUSG00000022456","2003-09-01","3110018K01Rik|AV154067|B530002E20Rik|Sep3","septin 3","protein-coding"]
[2915,"chr7",35802476,35803198,"+",0,"NA","non-coding (NR_033567, exon 1 of 3)","non-coding (NR_033567, exon 1 of 3)",152,"NM_177739",668501,"Mm.286296","NM_177739","ENSMUSG00000044452","Zfp507","1810022O10Rik|A230056M16Rik|AL024009|AU021817|BB105092|Gm480|Znf507|mKIAA1084","zinc finger protein 507","protein-coding"]
[1387,"chr17",24886471,24887461,"+",0,"NA","promoter-TSS (NM_027141)","promoter-TSS (NM_027141)",292,"NM_001163751",79043,"Mm.274794","NM_027141","ENSMUSG00000024160","Spsb3","2310012N15Rik|3300001M01Rik|SSB3|Tce1|mKIAA4204","splA/ryanodine receptor domain and SOCS box containing 3","protein-coding"]
[512,"chr11",73198743,73199951,"+",0,"NA","promoter-TSS (NM_031251)","promoter-TSS (NM_031251)",-135,"NM_029031",74637,"Mm.200905","NM_029031","ENSMUSG00000005951","Shpk","4930431K22Rik|AI194947|AW260459|Carkl","sedoheptulokinase","protein-coding"]
[1932,"chr2",109890552,109891366,"+",0,"NA","promoter-TSS (NM_011699)","promoter-TSS (NM_011699)",81,"NM_011699",22343,"Mm.235300","NM_011699","ENSMUSG00000027162","Lin7c","9130007B12Rik|AI303698|AU019331|AW125731|D2Ertd520e|LIN-7-C|LIN-7C|MALS-3|Veli3","lin-7 homolog C (C. elegans)","protein-coding"]
[463,"chr11",60931735,60932458,"+",0,"NA","promoter-TSS (NR_027800)","promoter-TSS (NR_027800)",39,"NM_008928",26397,"Mm.18494","NM_008928","ENSMUSG00000018932","Map2k3","AW212142|MEK3|MKK3|Prkmk3|mMKK3b","mitogen-activated protein kinase kinase 3","protein-coding"]
[517,"chr11",75530912,75531702,"+",0,"NA","promoter-TSS (NM_173388)","promoter-TSS (NM_173388)",-387,"NM_001199284",215113,"Mm.11186","NM_173388","ENSMUSG00000038178","Slc43a2","7630402D21Rik|BC042513|Lat4","solute carrier family 43, member 2","protein-coding"]
[458,"chr11",59970269,59971164,"+",0,"NA","3' UTR (NM_008819, exon 7 of 7)","3' UTR (NM_008819, exon 7 of 7)",-5772,"NM_009026",19416,"Mm.3903","NM_009026","ENSMUSG00000049892","Rasd1","Dexras1","RAS, dexamethasone-induced 1","protein-coding"]
[2634,"chr5",123344263,123345863,"+",0,"NA","intron (NM_029850, intron 1 of 5)","CpG",615,"NM_029850",77045,"Mm.151960","NM_029850","ENSMUSG00000029438","Bcl7a","4432415N06Rik|AI448316","B cell CLL/lymphoma 7A","protein-coding"]
[1785,"chr2",18671976,18672956,"+",0,"NA","promoter-TSS (NM_147778)","promoter-TSS (NM_147778)",4,"NM_147778",12238,"Mm.249586","NM_147778","ENSMUSG00000051154","Commd3","AW550818|Bup|D2Ertd542e","COMM domain containing 3","protein-coding"]
[1250,"chr16",13109560,13110471,"+",0,"NA","exon (NM_015769, exon 1 of 11)","exon (NM_015769, exon 1 of 11)",279,"NM_015769",50505,"Mm.287837","NM_015769",null,"Ercc4","AI606920|Xpf","excision repair cross-complementing rodent repair deficiency, complementation group 4","protein-coding"]
[1363,"chr17",15704329,15705870,"+",0,"NA","5' UTR (NM_007690, exon 1 of 36)","5' UTR (NM_007690, exon 1 of 36)",132,"NM_007690",12648,"Mm.8137","NM_007690","ENSMUSG00000023852","Chd1","4930525N21Rik|AI851787|AW555109","chromodomain helicase DNA binding protein 1","protein-coding"]
[722,"chr12",8297834,8299196,"+",0,"NA","exon (NM_013527, exon 2 of 2)","exon (NM_013527, exon 2 of 2)",3439,"NM_001312876",238057,"Mm.271308","NM_013527","ENSMUSG00000037660","Gdf7","BMP12","growth differentiation factor 7","protein-coding"]
[2507,"chr5",33721398,33722379,"+",0,"NA","promoter-TSS (NM_001163217)","promoter-TSS (NM_001163217)",164,"NM_001163215",14184,"Mm.6904","NM_008010","ENSMUSG00000054252","Fgfr3","CD333|FR3|Fgfr-3|Flg-2|HBGFR|Mfr3|sam3","fibroblast growth factor receptor 3","protein-coding"]
[3051,"chr7",128236986,128237946,"+",0,"NA","5' UTR (NM_146205, exon 1 of 6)","5' UTR (NM_146205, exon 1 of 6)",109,"NM_146205",233912,"Mm.475117","NM_146205","ENSMUSG00000042178","Armc5","AW049683|BC032200","armadillo repeat containing 5","protein-coding"]
[1109,"chr15",52040074,52040776,"+",0,"NA","exon (NM_175503, exon 1 of 2)","exon (NM_175503, exon 1 of 2)",318,"NM_175503",239435,"Mm.24204","NM_175503","ENSMUSG00000068522","Aard","A5D3|AV328152","alanine and arginine rich domain containing protein","protein-coding"]
[2067,"chr2",174760149,174761192,"+",0,"NA","promoter-TSS (NM_007903)","promoter-TSS (NM_007903)",-88,"NM_007903",13616,"Mm.9478","NM_007903","ENSMUSG00000027524","Edn3","114CH19|ET-3|PPET3|ls|tmgc48","endothelin 3","protein-coding"]
[1630,"chr19",4192101,4192945,"+",0,"NA","intron (NM_031868, intron 1 of 6)","CpG",349,"NM_031868",19045,"Mm.1970","NM_031868","ENSMUSG00000040385","Ppp1ca","Ppp1c|dism2","protein phosphatase 1, catalytic subunit, alpha isoform","protein-coding"]
[3497,"chr9",120539612,120540286,"+",0,"NA","intron (NM_178676, intron 1 of 10)","intron (NM_178676, intron 1 of 10)",131,"NM_178676",215446,"Mm.76648","NM_178676","ENSMUSG00000041608","Entpd3","Cd39l3|HB6|NTPDase-3","ectonucleoside triphosphate diphosphohydrolase 3","protein-coding"]
[1597,"chr18",67289186,67290064,"+",0,"NA","intron (NM_053261, intron 1 of 7)","intron (NM_053261, intron 1 of 7)",402,"NM_053261",114663,"Mm.34079","NM_053261","ENSMUSG00000024525","Impa2","2210415D20Rik|AI326924|AW259601","inositol (myo)-1(or 4)-monophosphatase 2","protein-coding"]
[3185,"chr8",81342221,81342943,"+",0,"NA","promoter-TSS (NM_001024617)","promoter-TSS (NM_001024617)",20,"NM_001297593",234515,"Mm.324468","NM_001024617","ENSMUSG00000037940","Inpp4b","E130107I17Rik","inositol polyphosphate-4-phosphatase, type II","protein-coding"]
[3109,"chr8",11311954,11312832,"+",0,"NA","promoter-TSS (NM_009932)","promoter-TSS (NM_009932)",-412,"NM_009932",12827,"Mm.181021","NM_009932","ENSMUSG00000031503","Col4a2","Col4a-2","collagen, type IV, alpha 2","protein-coding"]
[728,"chr12",16894801,16895439,"+",0,"NA","5' UTR (NM_009072, exon 1 of 33)","5' UTR (NM_009072, exon 1 of 33)",142,"NM_009072",19878,"Mm.276024","NM_009072","ENSMUSG00000020580","Rock2","B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619","Rho-associated coiled-coil containing protein kinase 2","protein-coding"]
[1244,"chr16",10192620,10193331,"+",0,"NA","promoter-TSS (NM_153123)","promoter-TSS (NM_153123)",69,"NM_029253",75329,"Mm.108729","NM_029253","ENSMUSG00000039200","Atf7ip2","4930558K11Rik|BC018510|Get-1|PSM2","activating transcription factor 7 interacting protein 2","protein-coding"]
[2154,"chr3",94372656,94373722,"+",0,"NA","intron (NM_011281, intron 1 of 10)","intron (NM_011281, intron 1 of 10)",395,"NM_011281",19885,"Mm.4372","NM_011281","ENSMUSG00000028150","Rorc","Nr1f3|RORgamma|TOR|Thor","RAR-related orphan receptor gamma","protein-coding"]
[1638,"chr19",5038666,5039527,"+",0,"NA","exon (NM_175383, exon 1 of 2)","exon (NM_175383, exon 1 of 2)",270,"NM_175383",108902,"Mm.491160","NM_175383","ENSMUSG00000047379","B4gat1","1500032M01Rik|B3gnt1|B3gnt6|BETA3GNT1|iGAT|iGNT","beta-1,4-glucuronyltransferase 1","protein-coding"]
[742,"chr12",36381454,36382288,"+",0,"NA","promoter-TSS (NM_001289503)","promoter-TSS (NM_001289503)",-276,"NM_001289503",75847,"Mm.261764","NM_178629","ENSMUSG00000043153","Ispd","4930579E17Rik|AV040780","isoprenoid synthase domain containing","protein-coding"]
[29,"chr1",50926765,50928240,"+",0,"NA","promoter-TSS (NM_019790)","promoter-TSS (NM_019790)",-21,"NM_019790",56363,"Mm.245154","NM_019790","ENSMUSG00000026109","Tmeff2","4832418D20Rik|7630402F16Rik|TR-2","transmembrane protein with EGF-like and two follistatin-like domains 2","protein-coding"]
[350,"chr10",118141488,118142413,"+",0,"NA","exon (NM_010785, exon 1 of 13)","exon (NM_010785, exon 1 of 13)",163,"NM_010785",17245,"Mm.101191","NM_010785","ENSMUSG00000020212","Mdm1","Arrd2|Mdm-1","transformed mouse 3T3 cell double minute 1","protein-coding"]
[1969,"chr2",128967020,128967655,"+",0,"NA","promoter-TSS (NM_178404)","promoter-TSS (NM_178404)",-65,"NM_178404",78751,"Mm.26377","NM_178404","ENSMUSG00000042851","Zc3h6","4631426G04Rik|4833425H18Rik|AU024389|AW060453|Zc3hdc6|mKIAA2035","zinc finger CCCH type containing 6","protein-coding"]
[1810,"chr2",26388411,26389855,"+",0,"NA","promoter-TSS (NM_173180)","promoter-TSS (NM_173180)",183,"NM_001085407",68112,"Mm.253771","NM_026563","ENSMUSG00000026927","Sdccag3","C330016H24Rik|C630038K21Rik","serologically defined colon cancer antigen 3","protein-coding"]
[2203,"chr3",137867375,137868001,"+",0,"NA","promoter-TSS (NM_001033155)","promoter-TSS (NM_001033155)",13,"NM_001033155",70604,"Mm.256488","NM_001033155","ENSMUSG00000074212","Dnajb14","5730496F10Rik","DnaJ (Hsp40) homolog, subfamily B, member 14","protein-coding"]
[58,"chr1",74854818,74856410,"+",0,"NA","exon (NM_009872, exon 1 of 1)","exon (NM_009872, exon 1 of 1)",585,"NM_009872",12570,"Mm.153833","NM_009872","ENSMUSG00000090071","Cdk5r2","B230310J22Rik|p39","cyclin-dependent kinase 5, regulatory subunit 2 (p39)","protein-coding"]
[153,"chr1",172147864,172148731,"+",0,"NA","intron (NM_153555, intron 1 of 13)","CpG",282,"NM_153555",98193,"Mm.159915","NM_153555","ENSMUSG00000026554","Dcaf8","AA408877|AA433120|AA792214|AU018973|C76055|D1Dau35e|D1Ucla4|H326|Wdr42a","DDB1 and CUL4 associated factor 8","protein-coding"]
[2932,"chr7",45717981,45718535,"+",0,"NA","promoter-TSS (NM_203280)","promoter-TSS (NM_203280)",187,"NM_009077",19899,"Mm.3459","NM_009077","ENSMUSG00000059070","Rpl18","L18|Rpl18a","ribosomal protein L18","protein-coding"]
[2754,"chr6",49319057,49319875,"+",0,"NA","5' UTR (NM_175098, exon 1 of 3)","5' UTR (NM_175098, exon 1 of 3)",192,"NM_001311112",57895,"Mm.32416","NM_175098","ENSMUSG00000050786","Ccdc126","6330407D12Rik|AA675040|AI465320|AL022711","coiled-coil domain containing 126","protein-coding"]
[2387,"chr4",134930792,134931473,"+",0,"NA","intron (NM_026780, intron 1 of 6)","CpG",152,"NM_026780",68592,"Mm.29989","NM_026780","ENSMUSG00000028821","Syf2","1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29","SYF2 homolog, RNA splicing factor (S. cerevisiae)","protein-coding"]
[1546,"chr18",31759337,31760582,"+",0,"NA","promoter-TSS (NM_001242430)","promoter-TSS (NM_001242430)",135,"NM_153515",225339,"Mm.290804","NM_153515","ENSMUSG00000041915","Ammecr1l","5430429D03Rik|AU022236|AU040755|AW111353|E230022H04Rik","AMME chromosomal region gene 1-like","protein-coding"]
[101,"chr1",120120571,120121340,"+",0,"NA","promoter-TSS (NM_001037999)","promoter-TSS (NM_001037999)",-36,"NM_001037999",13167,"Mm.2785","NM_007830","ENSMUSG00000026385","Dbi","ACBD1|Acbp|EP|endozepine","diazepam binding inhibitor","protein-coding"]
[2994,"chr7",99641194,99641648,"+",0,"NA","TTS (NR_039544)","TTS (NR_039544)",128,"NR_039544",100628570,null,"NR_039544","ENSMUSG00000093311","Mir3965","mmu-mir-3965|mu-mir-3965","microRNA 3965","ncRNA"]
[340,"chr10",108162350,108163044,"+",0,"NA","intron (NM_027892, intron 1 of 25)","CpG",297,"NM_027892",17931,"Mm.422959","NM_027892","ENSMUSG00000019907","Ppp1r12a","1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1","protein phosphatase 1, regulatory (inhibitor) subunit 12A","protein-coding"]
[3256,"chr8",109868274,109869397,"+",0,"NA","intron (NM_001122594, intron 1 of 18)","CpG",232,"NM_001122594",244650,"Mm.23494","NM_001122594","ENSMUSG00000031732","Phlpp2","AI481772|C130044A18Rik|Phlppl","PH domain and leucine rich repeat protein phosphatase 2","protein-coding"]
[311,"chr10",83543751,83544426,"+",0,"NA","exon (NM_001033375, exon 1 of 33)","exon (NM_001033375, exon 1 of 33)",147,"NM_001033375",319277,"Mm.491194","NM_001033375","ENSMUSG00000034560","A230046K03Rik","AA589518|Kiaa1033|mKIAA1033","RIKEN cDNA A230046K03 gene","protein-coding"]
[825,"chr12",110889023,110889896,"+",0,"NA","promoter-TSS (NM_026048)","promoter-TSS (NM_026048)",195,"NM_001081057",104859,"Mm.35583","NM_175336","ENSMUSG00000021275","Tecpr2","4930573I19Rik|AI604920|mKIAA0297","tectonin beta-propeller repeat containing 2","protein-coding"]
[917,"chr13",67552776,67553272,"+",0,"NA","promoter-TSS (NR_131099)","promoter-TSS (NR_131099)",128,"NM_001035231",212276,"Mm.422831","NM_183145","ENSMUSG00000095432","Zfp748","KRAB-O|Rslcan20/21|Zfp208|mszf54","zinc finger protein 748","protein-coding"]
[3431,"chr9",88327307,88327993,"+",0,"NA","promoter-TSS (NM_011851)","promoter-TSS (NM_011851)",41,"NM_011851",23959,"Mm.244235","NM_011851","ENSMUSG00000032420","Nt5e","2210401F01Rik|AI447961|CD73|NT|Nt5|eNT","5' nucleotidase, ecto","protein-coding"]
[2425,"chr4",148804056,148804920,"+",0,"NA","promoter-TSS (NM_027195)","promoter-TSS (NM_027195)",96,"NM_027195",69743,"Mm.233879","NM_027195","ENSMUSG00000028977","Casz1","2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e","castor zinc finger 1","protein-coding"]
[495,"chr11",70451716,70452436,"+",0,"NA","intron (NM_025397, intron 1 of 2)","CpG",145,"NM_025397",66172,"Mm.46424","NM_025397","ENSMUSG00000018923","Med11","1110030J09Rik|AI465144|AW545069","mediator complex subunit 11","protein-coding"]
[1703,"chr19",21777949,21779081,"+",0,"NA","5' UTR (NM_031997, exon 1 of 25)","5' UTR (NM_031997, exon 1 of 25)",175,"NM_031997",83921,"Mm.329776","NM_031997","ENSMUSG00000024754","Tmem2","-","transmembrane protein 2","protein-coding"]
[3302,"chr8",123442828,123443470,"+",0,"NA","promoter-TSS (NM_001281803)","promoter-TSS (NM_001281803)",-110,"NM_001281803",23854,"Mm.275127","NM_054046","ENSMUSG00000001482","Def8","AI449518|D8Ertd713e|DEF-8","differentially expressed in FDCP 8","protein-coding"]
[2086,"chr3",16182906,16183910,"+",0,"NA","non-coding (NR_027375, exon 1 of 6)","non-coding (NR_027375, exon 1 of 6)",225,"NM_001145919",229096,"Mm.23834","NM_172677","ENSMUSG00000047213","Ythdf3","9130022A11Rik","YTH domain family 3","protein-coding"]
[1322,"chr16",49855145,49856243,"+",0,"NA","promoter-TSS (NM_010581)","promoter-TSS (NM_010581)",40,"NM_010581",16423,"Mm.31752","NM_010581",null,"Cd47","9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp","CD47 antigen (Rh-related antigen, integrin-associated signal transducer)","protein-coding"]
[1816,"chr2",26933653,26934303,"+",0,"NA","promoter-TSS (NM_011512)","promoter-TSS (NM_011512)",-91,"NM_198628",279029,"Mm.330079","NM_198628","ENSMUSG00000049897","Stkld1","Gm711|Sgk071","serine/threonine kinase-like domain containing 1","protein-coding"]
[2460,"chr4",155992903,155993630,"+",0,"NA","promoter-TSS (NM_080445)","promoter-TSS (NM_080445)",-71,"NM_001302468",20318,"Mm.293517","NM_011341","ENSMUSG00000029076","Sdf4","Cab45","stromal cell derived factor 4","protein-coding"]
[2510,"chr5",34335676,34337152,"+",0,"NA","promoter-TSS (NM_001304269)","promoter-TSS (NM_001304269)",34,"NM_001304269",19822,"Mm.21281","NM_011278","ENSMUSG00000029110","Rnf4","AU018689|Gtrgeo8|SNURF","ring finger protein 4","protein-coding"]
[1172,"chr15",81235180,81235873,"+",0,"NA","promoter-TSS (NM_145132)","promoter-TSS (NM_145132)",27,"NM_145132",207911,"Mm.323523","NM_145132","ENSMUSG00000050164","Mchr1","AW049955|Gpr24|Mch1r","melanin-concentrating hormone receptor 1","protein-coding"]
[2699,"chr5",142401284,142402155,"+",0,"NA","exon (NM_199068, exon 1 of 9)","exon (NM_199068, exon 1 of 9)",222,"NM_199068",17425,"Mm.24214","NM_010812","ENSMUSG00000056493","Foxk1","A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf","forkhead box K1","protein-coding"]
[2458,"chr4",155943300,155944559,"+",0,"NA","promoter-TSS (NM_001284312)","promoter-TSS (NM_001284312)",116,"NM_021402",140499,"Mm.371673","NM_021402","ENSMUSG00000023286","Ube2j2","1200007B18Rik|2400008G19Rik|5730472G04Rik|AL022923|NCUBE-2|Ubc6|Ubc6p","ubiquitin-conjugating enzyme E2J 2","protein-coding"]
[1259,"chr16",16213273,16213730,"+",0,"NA","exon (NM_026163, exon 1 of 13)","exon (NM_026163, exon 1 of 13)",156,"NM_026163",67451,"Mm.2252","NM_026163","ENSMUSG00000041957","Pkp2","1200008D14Rik|1200012P04Rik|AA516617|Pkp2l","plakophilin 2","protein-coding"]
[834,"chr12",111813399,111814644,"+",0,"NA","promoter-TSS (NM_026752)","promoter-TSS (NM_026752)",-142,"NM_028875",74335,"Mm.19082","NM_028875","ENSMUSG00000021287","Xrcc3","-","X-ray repair complementing defective repair in Chinese hamster cells 3","protein-coding"]
[285,"chr10",80167515,80168357,"+",0,"NA","promoter-TSS (NM_007705)","promoter-TSS (NM_007705)",95,"NM_007705",12696,"Mm.17898","NM_007705","ENSMUSG00000045193","Cirbp","Cirp|R74941","cold inducible RNA binding protein","protein-coding"]
[2976,"chr7",82335215,82336565,"+",0,"NA","5' UTR (NM_001190374, exon 1 of 30)","5' UTR (NM_001190374, exon 1 of 30)",196,"NM_001190374",269959,"Mm.65306","NM_001190374","ENSMUSG00000070469","Adamtsl3","9230119C12Rik|C130057K09|mKIAA1233","ADAMTS-like 3","protein-coding"]
[2441,"chr4",152297195,152298118,"+",0,"NA","intron (NR_037908, intron 1 of 5)","(CCGGA)n|Simple_repeat|Simple_repeat",442,"NM_133788",57295,"Mm.277464","NM_133788","ENSMUSG00000039662","Icmt","1700008E11Rik|C80758|Gm13095|HSTE14|OTTMUSG00000010406|PPMT|STE14|pcCMT","isoprenylcysteine carboxyl methyltransferase","protein-coding"]
[3475,"chr9",108853785,108854798,"+",0,"NA","5' UTR (NM_134420, exon 1 of 18)","5' UTR (NM_134420, exon 1 of 18)",248,"NM_134420",171429,"Mm.45201","NM_134420","ENSMUSG00000023259","Slc26a6","B930010B04Rik|CFEX|Pat-1|Pat1","solute carrier family 26, member 6","protein-coding"]
[2414,"chr4",141147656,141148725,"+",0,"NA","intron (NM_172518, intron 1 of 9)","CpG",268,"NM_172518",213499,"Mm.28865","NM_172518","ENSMUSG00000028920","Fbxo42","6720460I06Rik|mKIAA1332","F-box protein 42","protein-coding"]
[1216,"chr15",99670254,99670936,"+",0,"NA","promoter-TSS (NM_009597)","promoter-TSS (NM_009597)",-123,"NM_009597",11419,"Mm.440107","NM_009597","ENSMUSG00000023017","Asic1","AI843610|ASIC|ASIC1a|Accn2|B530003N02Rik|BNaC2","acid-sensing (proton-gated) ion channel 1","protein-coding"]
[3421,"chr9",76014749,76015273,"+",0,"NA","promoter-TSS (NM_173731)","promoter-TSS (NM_173731)",34,"NM_173731",208982,"Mm.82306","NM_173731","ENSMUSG00000007908","Hmgcll1","BC037381","3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1","protein-coding"]
[3238,"chr8",105880750,105881646,"+",0,"NA","TTS (NM_026532)","TTS (NM_026532)",317,"NM_181594",234699,"Mm.28979","NM_181594","ENSMUSG00000036270","Edc4","BC022641","enhancer of mRNA decapping 4","protein-coding"]
[2285,"chr4",62479869,62480383,"+",0,"NA","promoter-TSS (NM_138653)","promoter-TSS (NM_138653)",59,"NM_138653",192120,"Mm.29808","NM_138653","ENSMUSG00000028392","Bspry","-","B-box and SPRY domain containing","protein-coding"]
[2274,"chr4",49631883,49632433,"+",0,"NA","promoter-TSS (NM_001163263)","promoter-TSS (NM_001163263)",98,"NM_182999",109331,"Mm.24765","NM_182999","ENSMUSG00000028309","Rnf20","4833430L21Rik|AW540162|C79397|mKIAA4116","ring finger protein 20","protein-coding"]
[2194,"chr3",127789409,127790117,"+",0,"NA","promoter-TSS (NM_145133)","promoter-TSS (NM_145133)",-150,"NM_145133",211550,"Mm.31852","NM_145133","ENSMUSG00000046688","Tifa","T2bp","TRAF-interacting protein with forkhead-associated domain","protein-coding"]
[3092,"chr7",142476429,142477245,"+",0,"NA","promoter-TSS (NM_001271523)","promoter-TSS (NM_001271523)",-176,"NM_001271523",16985,"Mm.234003","NM_019391","ENSMUSG00000018819","Lsp1","Lsp-1|WP34|p50|pp52","lymphocyte specific 1","protein-coding"]
[1135,"chr15",76327179,76327790,"+",0,"NA","promoter-TSS (NM_175399)","promoter-TSS (NM_175399)",87,"NM_175399",109075,"Mm.322752","NM_175399","ENSMUSG00000034259","Exosc4","1110039I09Rik|1500001N04Rik|Rrp41","exosome component 4","protein-coding"]
[2002,"chr2",154656921,154657600,"+",0,"NA","exon (NM_029362, exon 1 of 5)","exon (NM_029362, exon 1 of 5)",234,"NM_029362",75608,"Mm.262480","NM_029362","ENSMUSG00000038467","Chmp4b","2010012F05Rik|C76846|Snf7-2","charged multivesicular body protein 4B","protein-coding"]
[2864,"chr6",149309304,149309849,"+",0,"NA","5' UTR (NM_026054, exon 1 of 5)","5' UTR (NM_026054, exon 1 of 5)",162,"NM_001289662",67246,"Mm.333515","NM_026054","ENSMUSG00000032712","2810474O19Rik","6720435I21Rik|AA536804|AU020969|GET|Kiaa1551","RIKEN cDNA 2810474O19 gene","protein-coding"]
[1203,"chr15",94543361,94544088,"+",0,"NA","promoter-TSS (NM_029926)","promoter-TSS (NM_029926)",64,"NM_029926",266632,"Mm.422858","NM_029926","ENSMUSG00000059883","Irak4","8430405M07Rik|9330209D03Rik|IRAK-4|NY-REN-64","interleukin-1 receptor-associated kinase 4","protein-coding"]
[96,"chr1",95313475,95314373,"+",0,"NA","exon (NM_026321, exon 1 of 3)","exon (NM_026321, exon 1 of 3)",296,"NM_026321",67698,"Mm.272705","NM_026321","ENSMUSG00000051185","Fam174a","2310044D20Rik|Fam174|Naa6|Tmem157","family with sequence similarity 174, member A","protein-coding"]
[2088,"chr3",27153390,27154153,"+",0,"NA","promoter-TSS (NM_007900)","promoter-TSS (NM_007900)",83,"NM_007900",13605,"Mm.261453","NM_007900","ENSMUSG00000027699","Ect2","AI528536|mKIAA4037","ect2 oncogene","protein-coding"]
[1068,"chr14",102981560,102982760,"+",0,"NA","TTS (NR_039592)","TTS (NR_039592)",472,"NR_039592",100628599,null,"NR_039592","ENSMUSG00000092901","Mir5130","mir-5130|mmu-mir-5130|mu-mir-5130","microRNA 5130","ncRNA"]
[1667,"chr19",6913770,6914480,"+",0,"NA","TTS (NR_105956)","TTS (NR_105956)",161,"NR_105956",102466213,null,"NR_105956","ENSMUSG00000098413","Mir6990","Gm27726|mmu-mir-6990","microRNA 6990","ncRNA"]
[2114,"chr3",58525156,58526188,"+",0,"NA","promoter-TSS (NM_001005509)","promoter-TSS (NM_001005509)",-149,"NM_001005509",229317,"Mm.21617","NM_001005509","ENSMUSG00000027810","Eif2a","D030048D22|D3Ertd194e","eukaryotic translation initiation factor 2A","protein-coding"]
[486,"chr11",69632538,69633709,"+",0,"NA","5' UTR (NM_011814, exon 1 of 17)","5' UTR (NM_011814, exon 1 of 17)",152,"NM_011814",23879,"Mm.41930","NM_011814","ENSMUSG00000018765","Fxr2","Fxr2h","fragile X mental retardation, autosomal homolog 2","protein-coding"]
[2134,"chr3",87905942,87906959,"+",0,"NA","5' UTR (NM_008231, exon 1 of 6)","5' UTR (NM_008231, exon 1 of 6)",129,"NM_008231",15191,"Mm.292208","NM_008231","ENSMUSG00000004897","Hdgf","AI118077|D3Ertd299e","hepatoma-derived growth factor","protein-coding"]
[1354,"chr17",6079284,6080142,"+",0,"NA","promoter-TSS (NM_001111017)","promoter-TSS (NM_001111017)",26,"NM_001111017",321007,"Mm.5548","NM_177311","ENSMUSG00000015659","Serac1","4930511N22Rik|D17Ertd141e","serine active site containing 1","protein-coding"]
[569,"chr11",87127040,87127693,"+",0,"NA","5' UTR (NM_197987, exon 1 of 24)","5' UTR (NM_197987, exon 1 of 24)",291,"NM_197987",68729,"Mm.17436","NM_197987","ENSMUSG00000018548","Trim37","1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898","tripartite motif-containing 37","protein-coding"]
[8,"chr1",11414026,11414617,"+",0,"NA","5' UTR (NM_001160371, exon 1 of 8)","5' UTR (NM_001160371, exon 1 of 8)",216,"NM_001160371",320492,"Mm.52021","NM_177173","ENSMUSG00000057715","A830018L16Rik","-","RIKEN cDNA A830018L16 gene","protein-coding"]
[3239,"chr8",105900410,105900993,"+",0,"NA","intron (NM_173432, intron 1 of 2)","CpG",227,"NM_173432",244631,"Mm.27627","NM_173432","ENSMUSG00000048310","Pskh1","AW539964|E130013P03Rik|b2b1230Clo","protein serine kinase H1","protein-coding"]
[2359,"chr4",129057825,129059129,"+",0,"NA","exon (NM_029219, exon 1 of 9)","exon (NM_029219, exon 1 of 9)",206,"NM_029219",75234,"Mm.259672","NM_029219","ENSMUSG00000028793","Rnf19b","4930534K13Rik|4930555L03Rik|Ibrdc3","ring finger protein 19B","protein-coding"]
[3111,"chr8",11634750,11636150,"+",0,"NA","promoter-TSS (NR_030781)","promoter-TSS (NR_030781)",286,"NR_106097",102465714,null,"NR_106097","ENSMUSG00000104958","Mir7238","mmu-mir-7238","microRNA 7238","ncRNA"]
[2045,"chr2",164879232,164879872,"+",0,"NA","intron (NM_146129, intron 1 of 16)","CpG",184,"NM_146129",228866,"Mm.241134","NM_146129",null,"Pcif1","2310022K11Rik|C20orf67|F730014I05Rik","PDX1 C-terminal inhibiting factor 1","protein-coding"]
[1396,"chr17",25578786,25579974,"+",0,"NA","intron (NR_045520, intron 1 of 8)","CpG",206,"NR_045520",76483,"Mm.12787","NM_029624","ENSMUSG00000002279","Lmf1","2400010G15Rik|AW822050|Tmem112|cld","lipase maturation factor 1","protein-coding"]
[686,"chr11",119227905,119228759,"+",0,"NA","promoter-TSS (NM_175430)","promoter-TSS (NM_175430)",167,"NM_172443",207592,"Mm.205263","NM_172443","ENSMUSG00000039976","Tbc1d16","B930087K01|BC026530|Tcd1d16","TBC1 domain family, member 16","protein-coding"]
[3149,"chr8",57651712,57652965,"+",0,"NA","intron (NR_040698, intron 1 of 3)","CpG",585,"NR_040698",100502619,"Mm.393851","NR_040698",null,"AW046200","-","expressed sequence AW046200","ncRNA"]
[1760,"chr19",54044448,54045764,"+",0,"NA","promoter-TSS (NM_007417)","promoter-TSS (NM_007417)",-76,"NM_007417",11551,"Mm.235195","NM_007417","ENSMUSG00000033717","Adra2a","AW122659|Adra-2|Adra-2a|alpha(2A)AR|alpha2-C10|alpha2A|alpha2A-AR","adrenergic receptor, alpha 2a","protein-coding"]
[2033,"chr2",163016855,163017719,"+",0,"NA","promoter-TSS (NM_172150)","promoter-TSS (NM_172150)",-185,"NM_172150",245866,"Mm.34034","NM_172150","ENSMUSG00000017858","Ift52","BC037708|NGD5","intraflagellar transport 52","protein-coding"]
[391,"chr11",17257451,17257894,"+",0,"NA","promoter-TSS (NM_020558)","promoter-TSS (NM_020558)",54,"NM_020558",57316,"Mm.287982","NM_020558","ENSMUSG00000000581","C1d","1110036E10Rik|AI875855|SUN-CoR","C1D nuclear receptor co-repressor","protein-coding"]
[943,"chr13",97241044,97241947,"+",0,"NA","5' UTR (NM_007930, exon 1 of 3)","5' UTR (NM_007930, exon 1 of 3)",390,"NM_007930",13803,"Mm.241073","NM_007930","ENSMUSG00000041773","Enc1","Nrpb|PIG10","ectodermal-neural cortex 1","protein-coding"]
[2676,"chr5",137628857,137629659,"+",0,"NA","exon (NM_001168652, exon 1 of 18)","exon (NM_001168652, exon 1 of 18)",135,"NR_033148",100316903,"Mm.200763","NR_033148","ENSMUSG00000029720","Gm20605","Lrch4-sap25","predicted gene 20605","ncRNA"]
[1887,"chr2",61592991,61593677,"+",0,"NA","intron (NM_001164072, intron 1 of 7)","CpG",237,"NM_001164071",21353,"Mm.244393","NM_011529","ENSMUSG00000064289","Tank","C86182|E430026L09Rik|I-TRAF","TRAF family member-associated Nf-kappa B activator","protein-coding"]
[2907,"chr7",29289163,29289837,"+",0,"NA","exon (NM_026731, exon 1 of 4)","exon (NM_026731, exon 1 of 4)",180,"NM_026731",68458,"Mm.2343","NM_026731","ENSMUSG00000037166","Ppp1r14a","1110001M11Rik|Cpi17","protein phosphatase 1, regulatory (inhibitor) subunit 14A","protein-coding"]
[1375,"chr17",24469823,24471509,"+",0,"NA","exon (NM_025954, exon 1 of 2)","exon (NM_025954, exon 1 of 2)",193,"NM_025954",67078,"Mm.28541","NM_025954","ENSMUSG00000043445","Pgp","1700012G19Rik|AI481330|AUM","phosphoglycolate phosphatase","protein-coding"]
[180,"chr1",192190508,192191356,"+",0,"NA","5' UTR (NM_001038607, exon 1 of 11)","5' UTR (NM_001038607, exon 1 of 11)",155,"NM_010600",16510,"Mm.4489","NM_010600","ENSMUSG00000058248","Kcnh1","EAG1|Kv10.1|M-eag","potassium voltage-gated channel, subfamily H (eag-related), member 1","protein-coding"]
[1585,"chr18",60925493,60926047,"+",0,"NA","5' UTR (NM_177407, exon 1 of 18)","5' UTR (NM_177407, exon 1 of 18)",138,"NM_177407",12322,"Mm.131530","NM_009792","ENSMUSG00000024617","Camk2a","CaMKII|R74975|mKIAA0968","calcium/calmodulin-dependent protein kinase II alpha","protein-coding"]
[2939,"chr7",46795574,46796525,"+",0,"NA","promoter-TSS (NM_008186)","promoter-TSS (NM_008186)",-45,"NM_008186",14884,"Mm.22700","NM_008186","ENSMUSG00000006599","Gtf2h1","62kDa|AW743425|AW822074|BTF2 p62|C77871|p62","general transcription factor II H, polypeptide 1","protein-coding"]
[1877,"chr2",48813962,48814560,"+",0,"NA","5' UTR (NM_007396, exon 1 of 11)","5' UTR (NM_007396, exon 1 of 11)",152,"NM_007396",11480,"Mm.314338","NM_007396","ENSMUSG00000052155","Acvr2a","ActrIIa|Acvr2|TactrII","activin receptor IIA","protein-coding"]
[246,"chr10",68723458,68724139,"+",0,"NA","promoter-TSS (NM_177794)","promoter-TSS (NM_177794)",52,"NM_177794",327766,"Mm.2479","NM_177794","ENSMUSG00000060044","Tmem26","3230401A06|AI195372","transmembrane protein 26","protein-coding"]
[2705,"chr5",143464391,143465081,"+",0,"NA","exon (NM_144915, exon 1 of 15)","exon (NM_144915, exon 1 of 15)",243,"NM_144915",231871,"Mm.469963","NM_144915",null,"Daglb","E330036I19Rik","diacylglycerol lipase, beta","protein-coding"]
[2227,"chr4",8535456,8536433,"+",0,"NA","intron (NM_021518, intron 1 of 7)","CpG",300,"NM_021518",59021,"Mm.397471","NM_021518","ENSMUSG00000047187","Rab2a","9330148M11Rik|C80220|Rab2","RAB2A, member RAS oncogene family","protein-coding"]
[690,"chr11",119490919,119491716,"+",0,"NA","promoter-TSS (NM_177394)","promoter-TSS (NM_177394)",-30,"NM_001164636",338371,"Mm.271946","NM_177394","ENSMUSG00000039850","Endov","A730011L01Rik","endonuclease V","protein-coding"]
[3241,"chr8",106059425,106060347,"+",0,"NA","5' UTR (NM_010901, exon 1 of 10)","5' UTR (NM_010901, exon 1 of 10)",283,"NM_010901",18021,"Mm.383185","NM_010901","ENSMUSG00000031902","Nfatc3","C80703|D8Ertd281e|NFAT4|NFATx","nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3","protein-coding"]
[1168,"chr15",80286982,80287906,"+",0,"NA","5' UTR (NM_001044308, exon 1 of 37)","5' UTR (NM_001044308, exon 1 of 37)",206,"NM_001044308",239556,"Mm.291058","NM_001044308","ENSMUSG00000022416","Cacna1i","Ca(V)3.3","calcium channel, voltage-dependent, alpha 1I subunit","protein-coding"]
[61,"chr1",75210562,75211348,"+",0,"NA","promoter-TSS (NM_029010)","promoter-TSS (NM_029010)",126,"NM_011494",20872,"Mm.1155","NM_011494","ENSMUSG00000026201","Stk16","EDPK|Krct|MPSK|PKL12|TSF-1","serine/threonine kinase 16","protein-coding"]
[536,"chr11",78163594,78166167,"+",0,"NA","intron (NM_009423, intron 1 of 6)","intron (NM_009423, intron 1 of 6)",670,"NM_009423",22032,"Mm.390418","NM_009423",null,"Traf4","A530032M13Rik|CART1|msp2","TNF receptor associated factor 4","protein-coding"]
[1767,"chr19",59260669,59261632,"+",0,"NA","intron (NM_172523, intron 1 of 15)","CpG",272,"NM_172523",214084,"Mm.268797","NM_172523","ENSMUSG00000025094","Slc18a2","1110037L13Rik|9330105E13|Vmat2","solute carrier family 18 (vesicular monoamine), member 2","protein-coding"]
[1653,"chr19",6050804,6051525,"+",0,"NA","promoter-TSS (NR_105954)","promoter-TSS (NR_105954)",-170,"NR_105954",102465597,null,"NR_105954","ENSMUSG00000098928","Mir6988","Gm27593|mmu-mir-6988","microRNA 6988","ncRNA"]
[2237,"chr4",21727459,21728208,"+",0,"NA","5' UTR (NM_001290422, exon 1 of 13)","5' UTR (NM_001290422, exon 1 of 13)",132,"NM_001290420",51813,"Mm.278584","NM_016746","ENSMUSG00000028252","Ccnc","AI451004|AU020987|CG1C","cyclin C","protein-coding"]
[1688,"chr19",10041343,10042146,"+",0,"NA","exon (NM_021890, exon 1 of 12)","exon (NM_021890, exon 1 of 12)",196,"NM_021890",60527,"Mm.253875","NM_021890","ENSMUSG00000024664","Fads3","AI464531","fatty acid desaturase 3","protein-coding"]
[2394,"chr4",137277480,137278416,"+",0,"NA","intron (NM_009523, intron 1 of 4)","CpG",313,"NM_009523",22417,"Mm.20355","NM_009523","ENSMUSG00000036856","Wnt4","Wnt-4","wingless-type MMTV integration site family, member 4","protein-coding"]
[1266,"chr16",17489665,17490703,"+",0,"NA","intron (NM_175178, intron 1 of 20)","intron (NM_175178, intron 1 of 20)",507,"NM_175178",72168,"Mm.40038","NM_175178","ENSMUSG00000022763","Aifm3","2810401C16Rik|AI840249|Aifl","apoptosis-inducing factor, mitochondrion-associated 3","protein-coding"]
[3419,"chr9",75070819,75071517,"+",0,"NA","promoter-TSS (NM_010864)","promoter-TSS (NM_010864)",-38,"NM_010864",17918,"Mm.3645","NM_010864","ENSMUSG00000034593","Myo5a","9630007J19Rik|AI413174|AI661011|Dbv|MVa|Myo5|MyoVA|Sev-1|d|d-120J|flail|flr","myosin VA","protein-coding"]
[3326,"chr9",21029254,21029885,"+",0,"NA","TTS (NM_010493)","TTS (NM_010493)",196,"NM_023892",78369,"Mm.30220","NM_023892","ENSMUSG00000001014","Icam4","1810015M19Rik|Cd242|ICAM-4","intercellular adhesion molecule 4, Landsteiner-Wiener blood group","protein-coding"]
[2654,"chr5",129724879,129725594,"+",0,"NA","intron (NM_008095, intron 1 of 9)","CpG",161,"NM_008095",14467,"Mm.12468","NM_008095","ENSMUSG00000029432","Gbas","AV006093|Nipsnap2","glioblastoma amplified sequence","protein-coding"]
[3311,"chr8",125910019,125911468,"+",0,"NA","exon (NM_145608, exon 1 of 10)","exon (NM_145608, exon 1 of 10)",293,"NM_145608",234878,"Mm.216458","NM_145608","ENSMUSG00000031853","BC021891","Mlk4|mKIAA1804","cDNA sequence BC021891","protein-coding"]
[2958,"chr7",73740182,73741103,"+",0,"NA","exon (NM_001162532, exon 1 of 3)","exon (NM_001162532, exon 1 of 3)",335,"NM_001162532",100038347,"Mm.425464","NM_001162532","ENSMUSG00000078670","Fam174b","-","family with sequence similarity 174, member B","protein-coding"]
[1458,"chr17",35861213,35861677,"+",0,"NA","exon (NM_134122, exon 1 of 4)","exon (NM_134122, exon 1 of 4)",127,"NM_134122",106582,"Mm.390992","NM_134122","ENSMUSG00000059791","Nrm","2610307M02Rik|AI429796","nurim (nuclear envelope membrane protein)","protein-coding"]
[444,"chr11",57518164,57518988,"+",0,"NA","promoter-TSS (NM_026342)","promoter-TSS (NM_026342)",68,"NM_001168667",67726,"Mm.25632","NM_026342","ENSMUSG00000020523","Fam114a2","1810073G14Rik|9030624B09Rik","family with sequence similarity 114, member A2","protein-coding"]
[508,"chr11",72960927,72962065,"+",0,"NA","intron (NM_016745, intron 1 of 21)","CpG",327,"NM_001163337",53313,"Mm.6306","NM_016745","ENSMUSG00000020788","Atp2a3","SERCA3b|Serca3","ATPase, Ca++ transporting, ubiquitous","protein-coding"]
[1336,"chr16",90829898,90831593,"+",0,"NA","promoter-TSS (NM_001199210)","promoter-TSS (NM_001199210)",-114,"NR_133573",70967,"Mm.253077","NM_027627","ENSMUSG00000039903","Eva1c","1700092M14Rik|4931408A02Rik|Fam176c","eva-1 homolog C (C. elegans)","protein-coding"]
[39,"chr1",58392550,58393474,"+",0,"NA","promoter-TSS (NM_025824)","promoter-TSS (NM_025824)",-124,"NM_025824",66882,"Mm.21848","NM_025824","ENSMUSG00000051223","Bzw1","1200015E15Rik|mKIAA0005","basic leucine zipper and W2 domains 1","protein-coding"]
[3260,"chr8",111643327,111643973,"+",0,"NA","intron (NM_011742, intron 1 of 3)","CpG",207,"NM_011742",22640,"Mm.4184","NM_011742","ENSMUSG00000055835","Zfp1","Fnp-1|Zfp-1|mkr-1","zinc finger protein 1","protein-coding"]
[1089,"chr15",12321248,12322289,"+",0,"NA","exon (NM_025673, exon 1 of 4)","exon (NM_025673, exon 1 of 4)",272,"NM_025673",66629,"Mm.157655","NM_025673","ENSMUSG00000022200","Golph3","4733401N08Rik|5730410D03Rik|AW413496","golgi phosphoprotein 3","protein-coding"]
[558,"chr11",83753599,83754269,"+",0,"NA","exon (NM_145432, exon 1 of 20)","exon (NM_145432, exon 1 of 20)",297,"NM_145432",217026,"Mm.117874","NM_145432","ENSMUSG00000000976","Heatr6","2700008B19Rik|BB135312|BB249351","HEAT repeat containing 6","protein-coding"]
[12,"chr1",23761732,23763269,"+",0,"NA","5' UTR (NM_172124, exon 1 of 4)","5' UTR (NM_172124, exon 1 of 4)",574,"NM_172124",280645,"Mm.471661","NM_172124",null,"B3gat2","GlcAT-S|Glcats","beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)","protein-coding"]
[3200,"chr8",84912239,84913453,"+",0,"NA","promoter-TSS (NR_103491)","promoter-TSS (NR_103491)",-489,"NR_103491",100503676,"Mm.437155","NR_103491","ENSMUSG00000003812","Gm38426","-","predicted gene, 38426","ncRNA"]
[3036,"chr7",125707222,125708183,"+",0,"NA","promoter-TSS (NM_001081022)","promoter-TSS (NM_001081022)",-14,"NM_207239",233863,"Mm.294173","NM_207239","ENSMUSG00000032777","Gtf3c1","-","general transcription factor III C 1","protein-coding"]
[1554,"chr18",34623993,34624673,"+",0,"NA","promoter-TSS (NM_001166406)","promoter-TSS (NM_001166406)",-291,"NM_001166407",19348,"Mm.258846","NM_009004","ENSMUSG00000003779","Kif20a","AA415432|Rab6kifl","kinesin family member 20A","protein-coding"]
[2168,"chr3",100162100,100162952,"+",0,"NA","promoter-TSS (NM_010269)","promoter-TSS (NM_010269)",63,"NR_104341",14547,"Mm.279228","NM_010269","ENSMUSG00000027865","Gdap2","C77050|D3Ertd801e","ganglioside-induced differentiation-associated-protein 2","protein-coding"]
[573,"chr11",88099098,88099830,"+",0,"NA","non-coding (NR_045499, exon 4 of 4)","non-coding (NR_045499, exon 4 of 4)",318,"NM_198013",103841,"Mm.374846","NM_198013","ENSMUSG00000018378","Cuedc1","AI841487|C330016O16Rik","CUE domain containing 1","protein-coding"]
[3518,"chrX",73786793,73787551,"+",0,"NA","promoter-TSS (NM_008323)","promoter-TSS (NM_008323)",29,"NM_009279",20832,"Mm.831","NM_009279","ENSMUSG00000002014","Ssr4","AW743063|C78062|Trap","signal sequence receptor, delta","protein-coding"]
[2710,"chr5",144545234,144546978,"+",0,"NA","exon (NM_016789, exon 1 of 5)","exon (NM_016789, exon 1 of 5)",219,"NM_016789",53324,"Mm.10099","NM_016789","ENSMUSG00000059991","Nptx2","Narp|np2","neuronal pentraxin 2","protein-coding"]
[1084,"chr15",8168810,8169447,"+",0,"NA","promoter-TSS (NM_001162906)","promoter-TSS (NM_001162906)",22,"NM_001162906",73692,"Mm.164436","NM_001162906","ENSMUSG00000039801","2410089E03Rik","4732468D17Rik|Hug|Jbts17|b2b012Clo","RIKEN cDNA 2410089E03 gene","protein-coding"]
[3413,"chr9",72924778,72925956,"+",0,"NA","promoter-TSS (NM_028116)","promoter-TSS (NM_028116)",-283,"NM_028116",72135,"Mm.273605","NM_028116",null,"Pygo1","2600014C22Rik","pygopus 1","protein-coding"]
[3343,"chr9",37489064,37490071,"+",0,"NA","exon (NM_146222, exon 1 of 4)","exon (NM_146222, exon 1 of 4)",246,"NM_146222",235184,"Mm.127892","NM_146222","ENSMUSG00000042138","Msantd2","2810450G17Rik|9530092B10Rik","Myb/SANT-like DNA-binding domain containing 2","protein-coding"]
[3446,"chr9",103111187,103112175,"+",0,"NA","promoter-TSS (NM_173781)","promoter-TSS (NM_173781)",-393,"NM_173781",270192,"Mm.490252","NM_173781","ENSMUSG00000032549","Rab6b","9630015C03|AI844641|C330006L04Rik|D9Bwg0185e","RAB6B, member RAS oncogene family","protein-coding"]
[638,"chr11",104231029,104232908,"+",0,"NA","intron (NM_010838, intron 1 of 9)","CpG",532,"NM_001285454",17762,"Mm.1287","NM_010838","ENSMUSG00000018411","Mapt","AI413597|AW045860|Mtapt|Tau","microtubule-associated protein tau","protein-coding"]
[2350,"chr4",126677435,126678117,"+",0,"NA","exon (NM_011970, exon 1 of 6)","exon (NM_011970, exon 1 of 6)",133,"NM_011970",26445,"Mm.22233","NM_011970","ENSMUSG00000028837","Psmb2","AU045357|AW108089|C7-I|D4Wsu33e|HC7-I","proteasome (prosome, macropain) subunit, beta type 2","protein-coding"]
[875,"chr13",41249805,41250573,"+",0,"NA","5' UTR (NM_001135577, exon 1 of 2)","5' UTR (NM_001135577, exon 1 of 2)",345,"NM_001135577",108934,"Mm.38578","NM_001135577","ENSMUSG00000091264","Smim13","2900036K02Rik","small integral membrane protein 13","protein-coding"]
[3467,"chr9",108490629,108491476,"+",0,"NA","TTS (NM_008483)","TTS (NM_008483)",376,"NM_027804",71472,"Mm.289706","NM_027804","ENSMUSG00000006676","Usp19","8430421I07Rik|AI047774|Zmynd9","ubiquitin specific peptidase 19","protein-coding"]
[2479,"chr5",24504328,24505062,"+",0,"NA","exon (NM_015739, exon 2 of 2)","exon (NM_015739, exon 2 of 2)",22153,"NM_015739",231044,"Mm.246596","NM_015739",null,"Gbx1","Gbx-1","gastrulation brain homeobox 1","protein-coding"]
[1522,"chr17",87745798,87746429,"+",0,"NA","exon (NM_199251, exon 2 of 2)","exon (NM_199251, exon 2 of 2)",51881,"NM_199251",210741,"Mm.312046","NM_199251","ENSMUSG00000050138","Kcnk12","mntk1","potassium channel, subfamily K, member 12","protein-coding"]
[1,"chr1",4857933,4858434,"+",0,"NA","promoter-TSS (NM_001159751)","promoter-TSS (NM_001159751)",-145,"NM_001159751",21399,"Mm.207263","NM_011541","ENSMUSG00000033813","Tcea1","S-II","transcription elongation factor A (SII) 1","protein-coding"]
[3218,"chr8",94386034,94386976,"+",0,"NA","promoter-TSS (NM_022331)","promoter-TSS (NM_022331)",5,"NM_022331",64209,"Mm.29151","NM_022331","ENSMUSG00000031770","Herpud1","Herp|Mifl|SUP","homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1","protein-coding"]
[506,"chr11",72689913,72690655,"+",0,"NA","intron (NM_009671, intron 1 of 24)","CpG",282,"NM_009671",11736,"Mm.10313","NM_009671","ENSMUSG00000020790","Ankfy1","Ankhzn|ZFYVE14|mKIAA1255","ankyrin repeat and FYVE domain containing 1","protein-coding"]
[136,"chr1",153424798,153425723,"+",0,"NA","promoter-TSS (NM_001033162)","promoter-TSS (NM_001033162)",51,"NM_001033162",71836,"Mm.49460","NM_001033162","ENSMUSG00000042708","Shcbp1l","1700012A16Rik","Shc SH2-domain binding protein 1-like","protein-coding"]
[116,"chr1",133363369,133364169,"+",0,"NA","exon (NM_175443, exon 1 of 8)","exon (NM_175443, exon 1 of 8)",197,"NM_175443",214253,"Mm.52111","NM_175443","ENSMUSG00000070644","Etnk2","4933417N20Rik|AI197444|EKI 2|Eki2|Tuc1","ethanolamine kinase 2","protein-coding"]
[1197,"chr15",89088794,89089882,"+",0,"NA","exon (NM_027905, exon 1 of 9)","exon (NM_027905, exon 1 of 9)",231,"NM_027905",223776,"Mm.44763","NM_027905","ENSMUSG00000035757","Selo","1300018J18Rik","selenoprotein O","protein-coding"]
[1580,"chr18",56707272,56709165,"+",0,"NA","exon (NM_010721, exon 1 of 11)","exon (NM_010721, exon 1 of 11)",405,"NM_010721",16906,"Mm.4105","NM_010721","ENSMUSG00000024590","Lmnb1","-","lamin B1","protein-coding"]
[3274,"chr8",119574307,119575504,"+",0,"NA","promoter-TSS (NM_026648)","promoter-TSS (NM_026648)",295,"NM_175185",72552,"Mm.36756","NM_175185","ENSMUSG00000034189","Hsdl1","2700067E09Rik","hydroxysteroid dehydrogenase like 1","protein-coding"]
[2937,"chr7",46376129,46376916,"+",0,"NA","promoter-TSS (NM_010866)","promoter-TSS (NM_010866)",48,"NM_010866",17927,"Mm.1526","NM_010866","ENSMUSG00000009471","Myod1","AI503393|MYF3|MyoD|Myod-1|bHLHc1","myogenic differentiation 1","protein-coding"]
[2419,"chr4",143349222,143350961,"+",0,"NA","5' UTR (NM_001162983, exon 1 of 2)","5' UTR (NM_001162983, exon 1 of 2)",341,"NM_001162983",242735,"Mm.94020","NM_001162983","ENSMUSG00000028584","Lrrc38","A230053A07Rik","leucine rich repeat containing 38","protein-coding"]
[2146,"chr3",89233039,89234242,"+",0,"NA","TTS (NM_183037)","TTS (NM_183037)",4584,"NM_013605",17829,"Mm.16193","NM_013605","ENSMUSG00000042784","Muc1","CD227|EMA|Muc-1","mucin 1, transmembrane","protein-coding"]
[661,"chr11",115381835,115382455,"+",0,"NA","5' UTR (NM_001080929, exon 1 of 5)","5' UTR (NM_001080929, exon 1 of 5)",229,"NM_001080929",237988,"Mm.102872","NM_001080929","ENSMUSG00000050910","Cdr2l","D030068L24Rik|Gm21","cerebellar degeneration-related protein 2-like","protein-coding"]
[3157,"chr8",69808537,69809431,"+",0,"NA","intron (NM_198101, intron 1 of 20)","intron (NM_198101, intron 1 of 20)",297,"NM_198101",78816,"Mm.324305","NM_198101","ENSMUSG00000036246","Gmip","5031419I10Rik","Gem-interacting protein","protein-coding"]
[2845,"chr6",124711813,124712715,"+",0,"NA","promoter-TSS (NM_013536)","promoter-TSS (NM_013536)",-25,"NM_007531",12034,"Mm.36241","NM_007531","ENSMUSG00000004264","Phb2","AU044498|BAP|Bap37|Bcap37|REA","prohibitin 2","protein-coding"]
[2482,"chr5",25529401,25530404,"+",0,"NA","promoter-TSS (NR_027388)","promoter-TSS (NR_027388)",-116,"NR_027388",73571,"Mm.105263","NR_027388","ENSMUSG00000101856","1700096K18Rik","-","RIKEN cDNA 1700096K18 gene","ncRNA"]
[2719,"chr5",147957002,147958042,"+",0,"NA","5' UTR (NM_029920, exon 1 of 15)","5' UTR (NM_029920, exon 1 of 15)",202,"NM_029920",77521,"Mm.244177","NM_029920","ENSMUSG00000029651","Mtus2","5730592G18Rik|A730013O20Rik|AU067634|C130038G02Rik|Cazip|Gm763|mKIAA0774","microtubule associated tumor suppressor candidate 2","protein-coding"]
[1935,"chr2",112239181,112240101,"+",0,"NA","promoter-TSS (NM_207206)","promoter-TSS (NM_207206)",-200,"NM_207206",99010,"Mm.33438","NM_207206","ENSMUSG00000027134","Lpcat4","AI505034|Agpat7|Aytl3|LPEAT2","lysophosphatidylcholine acyltransferase 4","protein-coding"]
[2690,"chr5",139543822,139544815,"+",0,"NA","intron (NM_013702, intron 1 of 2)","CpG",420,"NM_013702",22255,"Mm.42190","NM_013702","ENSMUSG00000029546","Uncx","Chx4|Uncx4.1","UNC homeobox","protein-coding"]
[581,"chr11",93099013,93100222,"+",0,"NA","5' UTR (NM_028296, exon 1 of 9)","5' UTR (NM_028296, exon 1 of 9)",327,"NM_028296",72605,"Mm.342160","NM_028296","ENSMUSG00000056158","Car10","2700029L05Rik|BB085816|Ca10","carbonic anhydrase 10","protein-coding"]
[2727,"chr6",6955826,6956478,"+",0,"NA","exon (NM_001077713, exon 1 of 2)","exon (NM_001077713, exon 1 of 2)",134,"NM_001077713",71238,"Mm.389086","NM_001077713",null,"Sdhaf3","0610005M07Rik|4933430A16Rik|Acn9","succinate dehydrogenase complex assembly factor 3","protein-coding"]
[308,"chr10",81363447,81364278,"+",0,"NA","TTS (NM_001014836)","TTS (NM_001014836)",1958,"NM_001014836",432479,"Mm.440450","NM_001014836","ENSMUSG00000020234","4930404N11Rik","2210409H10Rik|5730551K18Rik|AI854616","RIKEN cDNA 4930404N11 gene","protein-coding"]
[3485,"chr9",114400819,114401726,"+",0,"NA","intron (NR_108101, intron 1 of 14)","CpG",177,"NM_001200002",100504715,"Mm.290516","NM_001200002","ENSMUSG00000079260","Tmppe","-","transmembrane protein with metallophosphoesterase domain","protein-coding"]
[678,"chr11",117199270,117200136,"+",0,"NA","promoter-TSS (NM_001113486)","promoter-TSS (NM_001113486)",42,"NM_001113486",53860,"Mm.38450","NM_017380","ENSMUSG00000059248","2009-09-01","MSF1|Msf|PNUTL4|Sint1","septin 9","protein-coding"]
[1517,"chr17",85090090,85091146,"+",0,"NA","promoter-TSS (NM_001163622)","promoter-TSS (NM_001163622)",-82,"NM_028576",73582,"Mm.260753","NM_028576",null,"Camkmt","1700106N22Rik|AI480743|AV099781|CLNMT|CaM KMT","calmodulin-lysine N-methyltransferase","protein-coding"]
[2808,"chr6",91877913,91878670,"+",0,"NA","intron (NM_172730, intron 1 of 10)","CpG",238,"NM_172730",232236,"Mm.234879","NM_172730","ENSMUSG00000034083","Ccdc174","C130022K22Rik","coiled-coil domain containing 174","protein-coding"]
[3025,"chr7",119895873,119896585,"+",0,"NA","promoter-TSS (NM_001163703)","promoter-TSS (NM_001163703)",-63,"NM_029610",73919,"Mm.46381","NM_029610","ENSMUSG00000030922","Lyrm1","1110065L10Rik|2310004B22Rik|4930404J24Rik","LYR motif containing 1","protein-coding"]
[3004,"chr7",101905585,101906395,"+",0,"NA","5' UTR (NM_025605, exon 1 of 5)","5' UTR (NM_025605, exon 1 of 5)",153,"NM_025605",66508,"Mm.30003","NM_025605","ENSMUSG00000030842","Lamtor1","2400001E08Rik|Pdro|p18","late endosomal/lysosomal adaptor, MAPK and MTOR activator 1","protein-coding"]
[1975,"chr2",130295624,130296367,"+",0,"NA","promoter-TSS (NM_001110513)","promoter-TSS (NM_001110513)",56,"NM_001110513",228598,"Mm.32582","NM_152993","ENSMUSG00000053552","Ebf4","Ebf3|O/E-4|Olf-1","early B cell factor 4","protein-coding"]
[2910,"chr7",30121746,30122287,"+",0,"NA","promoter-TSS (NM_001081007)","promoter-TSS (NM_001081007)",68,"NM_001081007",233060,"Mm.443484","NM_001081007","ENSMUSG00000074220","Zfp382","5930415A09Rik|Znf382","zinc finger protein 382","protein-coding"]
[1973,"chr2",129800429,129802052,"+",0,"NA","non-coding (NR_029452, exon 1 of 1)","non-coding (NR_029452, exon 1 of 1)",219,"NR_029452",654409,"Mm.305555","NR_029452",null,"4932416H05Rik","-","RIKEN cDNA 4932416H05 gene","ncRNA"]
[1991,"chr2",147083725,147084828,"+",0,"NA","exon (NM_023504, exon 2 of 2)","exon (NM_023504, exon 2 of 2)",1069,"NM_023504",228731,"Mm.315498","NM_023504","ENSMUSG00000054160","Nkx2-4","1700001P03Rik|Nkx-2.4|tinman","NK2 homeobox 4","protein-coding"]
[3027,"chr7",120842562,120843733,"+",0,"NA","promoter-TSS (NM_001267710)","promoter-TSS (NM_001267710)",316,"NM_007908",13631,"Mm.25997","NM_007908","ENSMUSG00000035064","Eef2k","C86191|eEF-2K","eukaryotic elongation factor-2 kinase","protein-coding"]
[927,"chr13",74008905,74010513,"+",0,"NA","intron (NM_182839, intron 1 of 3)","CpG",290,"NM_182839",72948,"Mm.39752","NM_182839","ENSMUSG00000021573","Tppp","2900041A09Rik|AI849835","tubulin polymerization promoting protein","protein-coding"]
[301,"chr10",81105518,81106356,"+",0,"NA","promoter-TSS (NM_023138)","promoter-TSS (NM_023138)",-10,"NM_023138",26396,"Mm.275436","NM_023138","ENSMUSG00000035027","Map2k2","AA589381|MEK2|MK2|Prkmk2","mitogen-activated protein kinase kinase 2","protein-coding"]
[3180,"chr8",75109200,75109917,"+",0,"NA","promoter-TSS (NM_008566)","promoter-TSS (NM_008566)",49,"NM_008566",17218,"Mm.5048","NM_008566","ENSMUSG00000005410","Mcm5","AA617332|AI324988|AL033333|Cdc46|Mcmd5|P1-CDC46","minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)","protein-coding"]
[2302,"chr4",99715311,99716093,"+",0,"NA","promoter-TSS (NM_001081264)","promoter-TSS (NM_001081264)",72,"NM_001081264",320438,"Mm.32408","NM_001081264","ENSMUSG00000073792","Alg6","E230028F23Rik","asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)","protein-coding"]
[51,"chr1",65186535,65187170,"+",0,"NA","promoter-TSS (NM_001111320)","promoter-TSS (NM_001111320)",167,"NM_001310624",18711,"Mm.38370","NM_011086","ENSMUSG00000025949","Pikfyve","5230400C17Rik|Pip5k|Pip5k3|Pipk5k3|PipkIII|p235","phosphoinositide kinase, FYVE finger containing","protein-coding"]
[1758,"chr19",53600321,53601048,"+",0,"NA","intron (NM_007790, intron 1 of 28)","CpG",288,"NM_007790",13006,"Mm.14910","NM_007790","ENSMUSG00000024974","Smc3","Bamacan|Cspg6|HCAP|Mmip1|SMC-3|SmcD","structural maintenance of chromosomes 3","protein-coding"]
[1822,"chr2",28513020,28514275,"+",0,"NA","intron (NM_001145834, intron 1 of 17)","CpG",480,"NM_001145834",19730,"Mm.5236","NM_009058","ENSMUSG00000026821","Ralgds","Gnds|Rgds|mKIAA1308","ral guanine nucleotide dissociation stimulator","protein-coding"]
[456,"chr11",59847884,59848561,"+",0,"NA","exon (NM_134029, exon 1 of 5)","exon (NM_134029, exon 1 of 5)",149,"NM_134029",103850,"Mm.41761","NM_134029","ENSMUSG00000032615","Nt5m","2010013E09Rik|AI846937|dNT-2","5',3'-nucleotidase, mitochondrial","protein-coding"]
[3063,"chr7",134670382,134671372,"+",0,"NA","intron (NM_001033420, intron 1 of 51)","CpG",190,"NM_001033420",330662,"Mm.436572","NM_001033420","ENSMUSG00000058325","Dock1","9130006G06Rik|AI854900|D630004B07Rik","dedicator of cytokinesis 1","protein-coding"]
[2745,"chr6",39592330,39593123,"+",0,"NA","intron (NM_026612, intron 1 of 3)","CpG",143,"NM_026612",68198,"Mm.29415","NM_026612","ENSMUSG00000002416","Ndufb2","1810011O01Rik|8kDa|AGGG|AI325567|CI-AGGG","NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2","protein-coding"]
[652,"chr11",111065736,111066291,"+",0,"NA","promoter-TSS (NM_008425)","promoter-TSS (NM_008425)",-151,"NM_008425",16518,"Mm.4951","NM_008425","ENSMUSG00000041695","Kcnj2","IRK1|Kcnf1|Kir2.1","potassium inwardly-rectifying channel, subfamily J, member 2","protein-coding"]
[1033,"chr14",57524567,57525085,"+",0,"NA","promoter-TSS (NM_145837)","promoter-TSS (NM_145837)",-3,"NM_145837",239114,"Mm.390726","NM_145837","ENSMUSG00000050222","Il17d","AI462269|IL-17D|Il27a","interleukin 17D","protein-coding"]
[2736,"chr6",29272370,29272985,"+",0,"NA","promoter-TSS (NM_023516)","promoter-TSS (NM_023516)",51,"NM_023516",69573,"Mm.45161","NM_023516","ENSMUSG00000043421","Hilpda","2310016C08Rik|AW049004|Hig2","hypoxia inducible lipid droplet associated","protein-coding"]
[2400,"chr4",138315131,138316193,"+",0,"NA","TTS (NR_105986)","TTS (NR_105986)",538,"NR_105986",102466788,null,"NR_105986","ENSMUSG00000099200","Mir7019","Gm27947|mmu-mir-7019","microRNA 7019","ncRNA"]
[2258,"chr4",43578061,43579285,"+",0,"NA","promoter-TSS (NM_172866)","promoter-TSS (NM_172866)",-62,"NM_172866",242406,"Mm.259311","NM_172866","ENSMUSG00000028468","Rgp1","1110029E03Rik|AI527196|F730001J03|mKIAA0258","RGP1 retrograde golgi transport homolog (S. cerevisiae)","protein-coding"]
[2034,"chr2",163054271,163055158,"+",0,"NA","promoter-TSS (NM_008652)","promoter-TSS (NM_008652)",79,"NM_008652",17865,"Mm.4594","NM_008652","ENSMUSG00000017861","Mybl2","B-Myb|Bmyb","myeloblastosis oncogene-like 2","protein-coding"]
[1539,"chr18",21001908,21002642,"+",0,"NA","intron (NM_207623, intron 1 of 6)","CpG",318,"NM_207623",56515,"Mm.253542","NM_019706","ENSMUSG00000024317","Rnf138","2410015A17Rik|2810480D20Rik|STRIN|Trif|Trif-d","ring finger protein 138","protein-coding"]
[2029,"chr2",160645892,160646610,"+",0,"NA","exon (NM_009408, exon 1 of 21)","exon (NM_009408, exon 1 of 21)",354,"NM_009408",21969,"Mm.217233","NM_009408","ENSMUSG00000070544","Top1","AI467334|D130064I21Rik|Top-1","topoisomerase (DNA) I","protein-coding"]
[796,"chr12",88360502,88361097,"+",0,"NA","promoter-TSS (NM_028105)","promoter-TSS (NM_028105)",17,"NM_028105",72113,"Mm.181387","NM_028105","ENSMUSG00000021044","Adck1","2610005A10Rik","aarF domain containing kinase 1","protein-coding"]
[2349,"chr4",126609538,126610148,"+",0,"NA","promoter-TSS (NM_001145950)","promoter-TSS (NM_001145950)",-11,"NM_001013755",230757,"Mm.296838","NM_001013755","ENSMUSG00000073755","5730409E04Rik","7530403E16Rik|AI849033","RIKEN cDNA 5730409E04Rik gene","protein-coding"]
[366,"chr10",128083162,128083797,"+",0,"NA","intron (NM_016774, intron 1 of 9)","CpG",172,"NM_016774",11947,"Mm.238973","NM_016774","ENSMUSG00000025393","Atp5b","-","ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit","protein-coding"]
[844,"chr12",112976347,112977257,"+",0,"NA","exon (NM_001145900, exon 2 of 5)","exon (NM_001145900, exon 2 of 5)",239,"NM_201646",399566,"Mm.440140","NM_201646","ENSMUSG00000002803","Btbd6","-","BTB (POZ) domain containing 6","protein-coding"]
[1541,"chr18",22344309,22345132,"+",0,"NA","promoter-TSS (NM_001167777)","promoter-TSS (NM_001167777)",-369,"NM_001167777",211961,"Mm.392310","NM_001167777","ENSMUSG00000045215","Asxl3","C230079D11Rik|D430002O22Rik|D930044O18Rik|Gm329|Gm945","additional sex combs like 3 (Drosophila)","protein-coding"]
[2723,"chr5",150522449,150522977,"+",0,"NA","promoter-TSS (NM_009765)","promoter-TSS (NM_009765)",92,"NM_001081001",12190,"Mm.236256","NM_009765","ENSMUSG00000041147","Brca2","Fancd1|RAB163","breast cancer 2, early onset","protein-coding"]
[272,"chr10",79780400,79781557,"+",0,"NA","TTS (NM_001042710)","TTS (NM_001042710)",3704,"NM_031380",83554,"Mm.251710","NM_031380","ENSMUSG00000020325","Fstl3","E030038F23Rik|Flrg","follistatin-like 3","protein-coding"]
[2343,"chr4",125084840,125085909,"+",0,"NA","intron (NM_001290701, intron 1 of 6)","CpG",240,"NM_001290701",70088,"Mm.291214","NM_027310","ENSMUSG00000028863","Meaf6","2310005N01Rik|2810036M01Rik","MYST/Esa1-associated factor 6","protein-coding"]
[775,"chr12",82169864,82170495,"+",0,"NA","intron (NM_001167983, intron 1 of 23)","CpG",163,"NM_001167983",217692,"Mm.261333","NM_172579","ENSMUSG00000042700","Sipa1l1","4931426N11Rik|AW213287|Spar|mKIAA0440","signal-induced proliferation-associated 1 like 1","protein-coding"]
[2518,"chr5",36484366,36485232,"+",0,"NA","promoter-TSS (NM_001170454)","promoter-TSS (NM_001170454)",211,"NM_025725",66717,"Mm.42368","NM_025725","ENSMUSG00000050677","Ccdc96","4921513E08Rik","coiled-coil domain containing 96","protein-coding"]
[3044,"chr7",127489031,127489659,"+",0,"NA","promoter-TSS (NR_106027)","promoter-TSS (NR_106027)",94,"NR_106027",102465642,null,"NR_106027","ENSMUSG00000098267","Mir7060","Gm27515|mmu-mir-7060","microRNA 7060","ncRNA"]
[2108,"chr3",53041006,53041932,"+",0,"NA","promoter-TSS (NM_175386)","promoter-TSS (NM_175386)",-78,"NM_175386",108927,"Mm.118617","NM_175386","ENSMUSG00000048332","Lhfp","2810489O06Rik|AI194968","lipoma HMGIC fusion partner","protein-coding"]
[20,"chr1",38987427,38988203,"+",0,"NA","promoter-TSS (NM_026850)","promoter-TSS (NM_026850)",1,"NM_026850",68833,"Mm.28121","NM_026850",null,"Pdcl3","1110061A19Rik|C80025|Viaf1","phosducin-like 3","protein-coding"]
[2376,"chr4",133130620,133131307,"+",0,"NA","intron (NM_153423, intron 1 of 8)","MIR3|SINE|MIR",330,"NM_153423",242687,"Mm.23566","NM_153423","ENSMUSG00000028868","Wasf2","AW742646|D4Ertd13e|WAVE2","WAS protein family, member 2","protein-coding"]
[888,"chr13",48966702,48968741,"+",0,"NA","promoter-TSS (NR_015601)","promoter-TSS (NR_015601)",107,"NM_001033268",218236,"Mm.426571","NM_001033268","ENSMUSG00000038014","Fam120a","C9orf10|Ossa","family with sequence similarity 120, member A","protein-coding"]
[1983,"chr2",132262826,132263704,"+",0,"NA","5' UTR (NM_001291040, exon 1 of 4)","5' UTR (NM_001291040, exon 1 of 4)",117,"NM_138651",110911,"Mm.284503","NM_138651","ENSMUSG00000058793","Cds2","5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e","CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2","protein-coding"]
[1011,"chr14",39472078,39472907,"+",0,"NA","promoter-TSS (NR_131973)","promoter-TSS (NR_131973)",63,"NR_131973",432842,"Mm.352566","NR_131973",null,"LOC432842","-","uncharacterized LOC432842","ncRNA"]
[3100,"chr8",3587393,3588222,"+",0,"NA","5' UTR (NM_027171, exon 1 of 17)","5' UTR (NM_027171, exon 1 of 17)",357,"NM_001163749",69697,"Mm.390010","NM_027171","ENSMUSG00000044433","Camsap3","2310057J16Rik|Kiaa1543|Nezha","calmodulin regulated spectrin-associated protein family, member 3","protein-coding"]
[1754,"chr19",47865278,47865911,"+",0,"NA","promoter-TSS (NM_026619)","promoter-TSS (NM_026619)",49,"NM_030051",68214,"Mm.63791","NM_026619","ENSMUSG00000025069","Gsto2","1700020F09Rik|4930425C18Rik|GSTO 2-2","glutathione S-transferase omega 2","protein-coding"]
[1627,"chr19",4083108,4084453,"+",0,"NA","intron (NM_001160252, intron 1 of 5)","intron (NM_001160252, intron 1 of 5)",261,"NM_013878",29866,"Mm.46268","NM_013878","ENSMUSG00000024857","Cabp2","-","calcium binding protein 2","protein-coding"]
[1161,"chr15",79250582,79251398,"+",0,"NA","TTS (NM_020516)","TTS (NM_020516)",3758,"NM_020516",57274,"Mm.441697","NM_020516","ENSMUSG00000032988","Slc16a8","Mct3","solute carrier family 16 (monocarboxylic acid transporters), member 8","protein-coding"]
[468,"chr11",62248963,62249682,"+",0,"NA","exon (NM_007413, exon 1 of 2)","exon (NM_007413, exon 1 of 2)",338,"NM_007413",11541,"Mm.40740","NM_007413","ENSMUSG00000018500","Adora2b","A2BAR|A2BR|A2b|AA2BR|AI480866|AI605384","adenosine A2b receptor","protein-coding"]
[2093,"chr3",32708429,32709454,"+",0,"NA","intron (NM_019673, intron 1 of 13)","CpG",395,"NM_019673",56456,"Mm.41077","NM_019673","ENSMUSG00000027671","Actl6a","2810432C06Rik|AI851094|ARP4|Actl6|Baf53a|C79802","actin-like 6A","protein-coding"]
[3030,"chr7",121864842,121865447,"+",0,"NA","intron (NR_073548, intron 1 of 12)","CpG",106,"NR_073548",20277,"Mm.7709","NM_011325","ENSMUSG00000030873","Scnn1b","-","sodium channel, nonvoltage-gated 1 beta","protein-coding"]
[1019,"chr14",54258947,54259609,"+",0,"NA","promoter-TSS (NM_134076)","promoter-TSS (NM_134076)",46,"NM_134076",105501,"Mm.28771","NM_134076","ENSMUSG00000040997","Abhd4","1110035H23Rik|AI429574|Abh4","abhydrolase domain containing 4","protein-coding"]
[700,"chr11",120530656,120531480,"+",0,"NA","intron (NM_008101, intron 1 of 13)","intron (NM_008101, intron 1 of 13)",341,"NM_008101",14527,"Mm.22329","NM_008101","ENSMUSG00000025127","Gcgr","GR","glucagon receptor","protein-coding"]
[1927,"chr2",101678343,101679113,"+",0,"NA","intron (NM_001303273, intron 1 of 6)","CpG",308,"NM_001303273",22034,"Mm.292729","NM_009424","ENSMUSG00000027164","Traf6","2310003F17Rik|AI851288|C630032O20Rik","TNF receptor-associated factor 6","protein-coding"]
[78,"chr1",89070229,89071239,"+",0,"NA","intron (NM_133816, intron 1 of 5)","CpG",272,"NM_133816",98402,"Mm.170983","NM_133816",null,"Sh3bp4","AI594717|AW227605|BOG25","SH3-domain binding protein 4","protein-coding"]
[3369,"chr9",50856867,50857508,"+",0,"NA","intron (NM_001286553, intron 1 of 16)","CpG",263,"NM_001286553",73699,"Mm.7726","NM_028614","ENSMUSG00000032058","Ppp2r1b","2410091N08Rik|AI790395","protein phosphatase 2, regulatory subunit A, beta","protein-coding"]
[3406,"chr9",66350183,66351011,"+",0,"NA","5' UTR (NM_145617, exon 1 of 78)","5' UTR (NM_145617, exon 1 of 78)",147,"NM_145617",235439,"Mm.244179","NM_145617","ENSMUSG00000038664","Herc1","2810449H11Rik|B230218H07|D130015N03Rik|tbl","hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1","protein-coding"]
[2853,"chr6",134035040,134036331,"+",0,"NA","promoter-TSS (NM_007961)","promoter-TSS (NM_007961)",-15,"NM_001303102",14011,"Mm.269995","NM_007961","ENSMUSG00000030199","Etv6","AW123102|AW557856|Tel","ets variant 6","protein-coding"]
[1380,"chr17",24669415,24670324,"+",0,"NA","exon (NM_183149, exon 1 of 12)","exon (NM_183149, exon 1 of 12)",117,"NM_183149",213753,"Mm.219581","NM_183149","ENSMUSG00000041130","Zfp598","BC023040|Ntrap|Znf598","zinc finger protein 598","protein-coding"]
[990,"chr14",30479237,30479738,"+",0,"NA","promoter-TSS (NM_133761)","promoter-TSS (NM_133761)",-78,"NM_133761",75901,"Mm.28733","NM_133761","ENSMUSG00000021962","Dcp1a","1110066A22Rik|4930568L04Rik|AU019772|D14Ertd817e|Mitc1|SMIF","DCP1 decapping enzyme homolog A (S. cerevisiae)","protein-coding"]
[413,"chr11",44518701,44519314,"+",0,"NA","promoter-TSS (NM_001166553)","promoter-TSS (NM_001166553)",43,"NM_028862",74315,"Mm.156771","NM_028862","ENSMUSG00000019189","Rnf145","3732413I11Rik|TMRF1","ring finger protein 145","protein-coding"]
[294,"chr10",80608496,80609437,"+",0,"NA","promoter-TSS (NR_105877)","promoter-TSS (NR_105877)",-294,"NR_105877",102465550,null,"NR_105877","ENSMUSG00000099283","Mir6912","Gm27990|mmu-mir-6912","microRNA 6912","ncRNA"]
[2316,"chr4",108847804,108848878,"+",0,"NA","exon (NM_029571, exon 1 of 1)","exon (NM_029571, exon 1 of 1)",484,"NM_029571",100087,"Mm.440007","NM_029571","ENSMUSG00000073775","Kti12","1110001A12Rik|AI326810|AU014758","KTI12 homolog, chromatin associated (S. cerevisiae)","protein-coding"]
[2218,"chr3",146851938,146852805,"+",0,"NA","promoter-TSS (NM_001302958)","promoter-TSS (NM_001302958)",4,"NM_001302958",70892,"Mm.187793","NM_027594","ENSMUSG00000036745","Ttll7","1110049N09Rik|4921517B04Rik|C630030B20|mTTLL7","tubulin tyrosine ligase-like family, member 7","protein-coding"]
[1614,"chr18",77713156,77714673,"+",0,"NA","promoter-TSS (NR_027978)","promoter-TSS (NR_027978)",96,"NM_178670",212163,"Mm.23293","NM_178670","ENSMUSG00000047466","8030462N17Rik","Akd2|Ark2N","RIKEN cDNA 8030462N17 gene","protein-coding"]
[1442,"chr17",34121902,34123033,"+",0,"NA","promoter-TSS (NM_010386)","promoter-TSS (NM_010386)",140,"NM_001204973",14312,"Mm.3444","NM_010238","ENSMUSG00000024335","Brd2","AW228947|D17H6S113E|Frg-1|Fsrg-1|Fsrg1|Nat|Ring3|Rnf3|mKIAA4005","bromodomain containing 2","protein-coding"]
[764,"chr12",76369850,76370908,"+",0,"NA","promoter-TSS (NM_028356)","promoter-TSS (NM_028356)",113,"NM_178744",268564,"Mm.77065","NM_178744",null,"Zbtb1","9430077A12|AI256369|Bsg2|C430003J21Rik","zinc finger and BTB domain containing 1","protein-coding"]
[349,"chr10",117629114,117629915,"+",0,"NA","promoter-TSS (NM_027468)","promoter-TSS (NM_027468)",14,"NM_027468",70574,"Mm.339332","NM_027468","ENSMUSG00000020183","Cpm","1110060I01Rik|5730456K23Rik|AA589379|E030045M14Rik","carboxypeptidase M","protein-coding"]
[1743,"chr19",45363360,45364257,"+",0,"NA","promoter-TSS (NM_009771)","promoter-TSS (NM_009771)",74,"NM_001037758",12234,"Mm.119717","NM_009771","ENSMUSG00000025217","Btrc","Beta-Trcp1|E3RS-IkappaB|E3RSIkappaB|FWD1|Fbw1a|HOS|Slimb|b-TrCP|beta-TrCP","beta-transducin repeat containing protein","protein-coding"]
[3364,"chr9",48494951,48495972,"+",0,"NA","promoter-TSS (NM_144948)","promoter-TSS (NM_144948)",118,"NM_001004191",434402,"Mm.386950","NM_001004191","ENSMUSG00000042293","Gm5617","EG434402","predicted gene 5617","protein-coding"]
[2075,"chr2",180589020,180589963,"+",0,"NA","promoter-TSS (NM_031373)","promoter-TSS (NM_031373)",84,"NM_031373",72075,"Mm.250418","NM_031373","ENSMUSG00000049401","Ogfr","2010013E17Rik","opioid growth factor receptor","protein-coding"]
[3251,"chr8",107056122,107057095,"+",0,"NA","promoter-TSS (NR_028367)","promoter-TSS (NR_028367)",129,"NM_139229",97484,"Mm.288641","NM_139229",null,"Cog8","BB235941|C87832","component of oligomeric golgi complex 8","protein-coding"]
[1981,"chr2",131233753,131234606,"+",0,"NA","5' UTR (NM_144888, exon 1 of 7)","5' UTR (NM_144888, exon 1 of 7)",116,"NM_144888",228607,"Mm.287226","NM_144888","ENSMUSG00000037523","Mavs","D430028G21Rik|IPS-1|Visa|cardif","mitochondrial antiviral signaling protein","protein-coding"]
[3205,"chr8",85700131,85701485,"+",0,"NA","promoter-TSS (NR_106189)","promoter-TSS (NR_106189)",-97,"NR_106189",102465898,null,"NR_106189","ENSMUSG00000098388","Mir8109","Gm27495|mmu-mir-8109","microRNA 8109","ncRNA"]
[2081,"chr2",181364651,181365550,"+",0,"NA","promoter-TSS (NM_001048148)","promoter-TSS (NM_001048148)",169,"NM_144894",229007,"Mm.87720","NM_144894","ENSMUSG00000027582","Zgpat","1500006I01Rik|BC021513","zinc finger, CCCH-type with G patch domain","protein-coding"]
[1383,"chr17",24752958,24753639,"+",0,"NA","exon (NM_001012402, exon 1 of 2)","exon (NM_001012402, exon 1 of 2)",295,"NM_001012402",328779,"Mm.328848","NM_001012402","ENSMUSG00000039628","Hs3st6","3-OST-6","heparan sulfate (glucosamine) 3-O-sulfotransferase 6","protein-coding"]
[606,"chr11",98939210,98939900,"+",0,"NA","promoter-TSS (NM_001177303)","promoter-TSS (NM_001177303)",-156,"NM_001177303",19401,"Mm.439744","NM_009024","ENSMUSG00000037992","Rara","Nr1b1|RAR|RARalpha1","retinoic acid receptor, alpha","protein-coding"]
[137,"chr1",153899398,153900899,"+",0,"NA","TTS (NR_106194)","TTS (NR_106194)",219,"NM_008131",14645,"Mm.210745","NM_008131","ENSMUSG00000026473","Glul","GS|Glns","glutamate-ammonia ligase (glutamine synthetase)","protein-coding"]
[1414,"chr17",28207475,28208268,"+",0,"NA","promoter-TSS (NM_027185)","promoter-TSS (NM_027185)",93,"NM_027185",23853,"Mm.204731","NM_027185","ENSMUSG00000002257","Def6","2410003F05Rik|6430538D02Rik|AV094905|Ibp|Slat|Slat2|Slat6","differentially expressed in FDCP 6","protein-coding"]
[2522,"chr5",38219814,38220927,"+",0,"NA","promoter-TSS (NM_025281)","promoter-TSS (NM_025281)",58,"NM_029162",75079,"Mm.258741","NM_029162","ENSMUSG00000029127","Zbtb49","4930518A03Rik|Zfp509|Znf509","zinc finger and BTB domain containing 49","protein-coding"]
[1855,"chr2",32606795,32607920,"+",0,"NA","intron (NM_001025310, intron 1 of 5)","intron (NM_001025310, intron 1 of 5)",372,"NR_110347",50935,"Mm.88831","NM_016973","ENSMUSG00000026811","St6galnac6","ST6GalNAcVI|Siat7f","ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6","protein-coding"]
[666,"chr11",115765410,115766205,"+",0,"NA","intron (NM_028014, intron 1 of 31)","CpG",374,"NM_028014",71947,"Mm.23168","NM_028014","ENSMUSG00000020747","Tmem94","2310067B10Rik|Kiaa0195|mKIAA0195","transmembrane protein 94","protein-coding"]
[432,"chr11",52764324,52765982,"+",0,"NA","intron (NM_177059, intron 1 of 15)","CpG",447,"NM_177059",320027,"Mm.44518","NM_177059",null,"Fstl4","B230374F23Rik|SPIG1|mKIAA1061","follistatin-like 4","protein-coding"]
[1074,"chr14",118854534,118855554,"+",0,"NA","promoter-TSS (NM_001160099)","promoter-TSS (NM_001160099)",94,"NM_001160099",58187,"Mm.390755","NM_021386","ENSMUSG00000022132","Cldn10","6720456I16Rik|Cldn10a|Cldn10b|D14Ertd728e","claudin 10","protein-coding"]
[860,"chr13",21179755,21181101,"+",0,"NA","5' UTR (NM_009054, exon 1 of 8)","5' UTR (NM_009054, exon 1 of 8)",497,"NM_009054",19720,"Mm.314056","NM_009054","ENSMUSG00000021326","Trim27","AW538890|Gm19403|Rfp","tripartite motif-containing 27","protein-coding"]
[2308,"chr4",106315673,106316887,"+",0,"NA","promoter-TSS (NM_183225)","promoter-TSS (NM_183225)",67,"NM_183225",329908,"Mm.234544","NM_183225","ENSMUSG00000028514","Usp24","2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851","ubiquitin specific peptidase 24","protein-coding"]
[1567,"chr18",37806102,37807067,"+",0,"NA","exon (NM_033581, exon 1 of 4)","exon (NM_033581, exon 1 of 4)",174,"NM_033581",93706,"Mm.247203","NM_033581","ENSMUSG00000023036","Pcdhgc3","PC43|Pcdh2","protocadherin gamma subfamily C, 3","protein-coding"]
[1063,"chr14",77156210,77157902,"+",0,"NA","intron (NM_172813, intron 1 of 18)","CpG",293,"NM_172813",239188,"Mm.441158","NM_172813","ENSMUSG00000022012","Enox1","B230207J08|D230005D02Rik","ecto-NOX disulfide-thiol exchanger 1","protein-coding"]
[1776,"chr2",6322354,6323333,"+",0,"NA","promoter-TSS (NM_001080548)","promoter-TSS (NM_001080548)",86,"NM_001080548",98910,"Mm.40673","NM_181399","ENSMUSG00000039046","Usp6nl","AI316785|RNTRE|TRE2NL|mKIAA0019","USP6 N-terminal like","protein-coding"]
[2565,"chr5",100846178,100847051,"+",0,"NA","intron (NM_172715, intron 1 of 12)","CpG",385,"NM_172715",231510,"Mm.271911","NM_172715","ENSMUSG00000029314","Agpat9","1-AGPAT|1-AGPAT 9|4933407I02Rik|4933408F15|A230097K15Rik|GPAT-3|mGPAT3","1-acylglycerol-3-phosphate O-acyltransferase 9","protein-coding"]
[3047,"chr7",127746518,127747247,"+",0,"NA","5' UTR (NM_172748, exon 1 of 11)","5' UTR (NM_172748, exon 1 of 11)",107,"NM_172748",233902,"Mm.259353","NM_172748","ENSMUSG00000030811","Fbxl19","6030430O11|BC059812|Fbl19","F-box and leucine-rich repeat protein 19","protein-coding"]
[2158,"chr3",95658337,95659790,"+",0,"NA","exon (NM_008562, exon 1 of 3)","exon (NM_008562, exon 1 of 3)",342,"NM_008562",17210,"Mm.1639","NM_008562","ENSMUSG00000038612","Mcl1","AW556805|Mcl-1","myeloid cell leukemia sequence 1","protein-coding"]
[2576,"chr5",106964034,106964941,"+",0,"NA","promoter-TSS (NM_001271566)","promoter-TSS (NM_001271566)",-74,"NM_001271566",12545,"Mm.20842","NM_009863","ENSMUSG00000029283","Cdc7","AI597260|Cdc7l1|muCdc7","cell division cycle 7 (S. cerevisiae)","protein-coding"]
[3287,"chr8",122376300,122377101,"+",0,"NA","promoter-TSS (NM_001029994)","promoter-TSS (NM_001029994)",84,"NM_001029993",76014,"Mm.241489","NM_001029993","ENSMUSG00000017478","Zc3h18","1190001B23Rik|5830416A07Rik|Nhn1","zinc finger CCCH-type containing 18","protein-coding"]
[2415,"chr4",141444475,141445151,"+",0,"NA","intron (NM_009541, intron 1 of 15)","CpG",140,"NM_009541",22642,"Mm.389590","NM_009541","ENSMUSG00000006215","Zbtb17","AA589413|Lp-1|Miz1|Zfp100|mZ13","zinc finger and BTB domain containing 17","protein-coding"]
[2362,"chr4",129820043,129821019,"+",0,"NA","promoter-TSS (NM_008974)","promoter-TSS (NM_008974)",52,"NM_008974",19244,"Mm.193688","NM_008974","ENSMUSG00000028788","Ptp4a2","Prl-2","protein tyrosine phosphatase 4a2","protein-coding"]
[708,"chr11",120948744,120949572,"+",0,"NA","promoter-TSS (NM_001038654)","promoter-TSS (NM_001038654)",91,"NM_001038654",80879,"Mm.28632","NM_030696","ENSMUSG00000025161","Slc16a3","Mct3|Mct4","solute carrier family 16 (monocarboxylic acid transporters), member 3","protein-coding"]
[2583,"chr5",108629128,108630034,"+",0,"NA","promoter-TSS (NM_001163532)","promoter-TSS (NM_001163532)",196,"NM_153569",231580,"Mm.276647","NM_153569","ENSMUSG00000062234","Gak","D130045N16Rik","cyclin G associated kinase","protein-coding"]
[2796,"chr6",87981558,87982310,"+",0,"NA","promoter-TSS (NM_198622)","promoter-TSS (NM_198622)",251,"NR_026990",434064,"Mm.371796","NR_026990","ENSMUSG00000084950","Gm5577","EG434064","predicted gene 5577","ncRNA"]
[2589,"chr5",111330301,111331389,"+",0,"NA","intron (NM_001301643, intron 1 of 10)","CpG",148,"NM_001301666",56305,"Mm.200516","NM_019640","ENSMUSG00000050017","Pitpnb","PI-TP-beta","phosphatidylinositol transfer protein, beta","protein-coding"]
[3286,"chr8",122356468,122357497,"+",0,"NA","TTS (NM_133202)","TTS (NM_133202)",3764,"NM_133202",170732,"Mm.154808","NM_133202","ENSMUSG00000039079","Trhr2","TRH-R2","thyrotropin releasing hormone receptor 2","protein-coding"]
[1601,"chr18",67799887,67800359,"+",0,"NA","promoter-TSS (NM_027556)","promoter-TSS (NM_027556)",16,"NM_027556",70799,"Mm.30857","NM_027556","ENSMUSG00000024542","Cep192","4631422C13Rik|D430014P18Rik","centrosomal protein 192","protein-coding"]
[2814,"chr6",103510555,103511159,"+",0,"NA","promoter-TSS (NM_007697)","promoter-TSS (NM_007697)",-19,"NM_007697",12661,"Mm.251288","NM_007697","ENSMUSG00000030077","Chl1","A530023M13Rik|AI465420|CALL|LICAM2","cell adhesion molecule with homology to L1CAM","protein-coding"]
[710,"chr11",121259637,121260759,"+",0,"NA","exon (NM_001080932, exon 1 of 9)","exon (NM_001080932, exon 1 of 9)",211,"NM_001080932",68837,"Mm.209750","NM_001080932","ENSMUSG00000039275","Foxk2","1110054H05Rik|5730434B08Rik|6230415M23Rik|ILF|Ilf1","forkhead box K2","protein-coding"]
[1656,"chr19",6164365,6165189,"+",0,"NA","intron (NM_028967, intron 1 of 2)","intron (NM_028967, intron 1 of 2)",319,"NM_028967",74481,"Mm.159219","NM_028967","ENSMUSG00000039699","Batf2","4933430F08Rik","basic leucine zipper transcription factor, ATF-like 2","protein-coding"]
[323,"chr10",89685694,89686456,"+",0,"NA","promoter-TSS (NR_130956)","promoter-TSS (NR_130956)",210,"NM_198021",213326,"Mm.27651","NM_198021","ENSMUSG00000069539","Scyl2","AU015688|AW536445|BC030932|CVAK104|D10Ertd802e","SCY1-like 2 (S. cerevisiae)","protein-coding"]
[856,"chr13",14630009,14630662,"+",0,"NA","promoter-TSS (NM_134067)","promoter-TSS (NM_134067)",77,"NM_134067",105351,"Mm.41450","NM_134067","ENSMUSG00000039182","AW209491","-","expressed sequence AW209491","protein-coding"]
[2142,"chr3",88620913,88621563,"+",0,"NA","promoter-TSS (NM_001198913)","promoter-TSS (NM_001198913)",132,"NM_008487",16800,"Mm.239329","NM_008487","ENSMUSG00000028059","Arhgef2","AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651","rho/rac guanine nucleotide exchange factor (GEF) 2","protein-coding"]
[1834,"chr2",30172774,30173508,"+",0,"NA","TTS (NM_172660)","TTS (NM_172660)",1617,"NM_007931",13804,"Mm.474473","NM_007931","ENSMUSG00000015337","Endog","-","endonuclease G","protein-coding"]
[1664,"chr19",6829842,6830865,"+",0,"NA","promoter-TSS (NR_039555)","promoter-TSS (NR_039555)",-409,"NR_039555",100628576,null,"NR_039555","ENSMUSG00000104884","Mir5046","mmu-mir-5046|mu-mir-5046","microRNA 5046","ncRNA"]
[112,"chr1",132417245,132418280,"+",0,"NA","exon (NM_172516, exon 1 of 13)","exon (NM_172516, exon 1 of 13)",309,"NM_172516",213452,"Mm.257120","NM_172516","ENSMUSG00000042046","Dstyk","A930019K20Rik|C430014H23Rik|C820013G01|Ripk5","dual serine/threonine and tyrosine protein kinase","protein-coding"]
[3211,"chr8",88696934,88697589,"+",0,"NA","intron (NM_173369, intron 1 of 16)","CpG",233,"NM_001128171",74256,"Mm.490395","NM_173369","ENSMUSG00000036712","Cyld","2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849","cylindromatosis (turban tumor syndrome)","protein-coding"]
[545,"chr11",78535882,78536946,"+",0,"NA","promoter-TSS (NM_018854)","promoter-TSS (NM_018854)",-22,"NM_018854",55978,"Mm.358671","NM_018854","ENSMUSG00000001105","Ift20","0610009H04Rik|AU015496","intraflagellar transport 20","protein-coding"]
[191,"chr10",11343307,11344017,"+",0,"NA","exon (NM_010146, exon 1 of 4)","exon (NM_010146, exon 1 of 4)",217,"NM_010146",13853,"Mm.89946","NM_010146",null,"Epm2a","TG-B|Tg(TcraK,TcrbK)TG-BFlv","epilepsy, progressive myoclonic epilepsy, type 2 gene alpha","protein-coding"]
[2733,"chr6",17463776,17464493,"+",0,"NA","5' UTR (NM_008591, exon 1 of 22)","5' UTR (NM_008591, exon 1 of 22)",177,"NM_008591",17295,"Mm.86844","NM_008591","ENSMUSG00000009376","Met","AI838057|HGF|HGFR|Par4|c-Met","met proto-oncogene","protein-coding"]
[2467,"chr5",8893577,8894257,"+",0,"NA","intron (NM_008830, intron 1 of 27)","CpG",196,"NM_008830",18670,"Mm.297825","NM_008830","ENSMUSG00000042476","Abcb4","Mdr2|Pgy-2|Pgy2|mdr-2","ATP-binding cassette, sub-family B (MDR/TAP), member 4","protein-coding"]
[187,"chr10",7680715,7681603,"+",0,"NA","promoter-TSS (NR_033219)","promoter-TSS (NR_033219)",-1,"NR_033219",407824,"Mm.393120","NR_033219",null,"BC020402","-","cDNA sequence BC020402","ncRNA"]
[588,"chr11",95119954,95120601,"+",0,"NA","5' UTR (NM_010055, exon 1 of 3)","5' UTR (NM_010055, exon 1 of 3)",160,"NM_010055",13393,"Mm.5194","NM_010055","ENSMUSG00000001510","Dlx3","AV237891|Dlx-3","distal-less homeobox 3","protein-coding"]
[1684,"chr19",8941624,8942617,"+",0,"NA","TTS (NM_144872)","TTS (NM_144872)",200,"NM_011842",23942,"Mm.25339","NM_011842","ENSMUSG00000071646","Mta2","AW550797|Mata1l1|Mta1l1|mmta2","metastasis-associated gene family, member 2","protein-coding"]
[756,"chr12",71309463,71310565,"+",0,"NA","exon (NM_021532, exon 1 of 4)","exon (NM_021532, exon 1 of 4)",130,"NM_001190466",59036,"Mm.46662","NM_021532","ENSMUSG00000044548","Dact1","4921528D17Rik|AI115603|DAPPER|DAPPER1|FRODO|Frd1|Frodo1|MDpr1|MTNG3|THYEX3","dapper homolog 1, antagonist of beta-catenin (xenopus)","protein-coding"]
[2326,"chr4",116876664,116877722,"+",0,"NA","promoter-TSS (NM_001029912)","promoter-TSS (NM_001029912)",-209,"NM_001029912",74464,"Mm.218946","NM_001029912","ENSMUSG00000033948","Zswim5","4933426E21Rik|AI503093|mKIAA1511","zinc finger SWIM-type containing 5","protein-coding"]
[1283,"chr16",20141054,20141671,"+",0,"NA","intron (NM_001033237, intron 1 of 29)","CpG",299,"NM_001145930",208146,"Mm.390895","NM_001033237","ENSMUSG00000041215","Yeats2","BC042768|mKIAA1197","YEATS domain containing 2","protein-coding"]
[262,"chr10",78069073,78069963,"+",0,"NA","5' UTR (NM_015790, exon 1 of 7)","5' UTR (NM_015790, exon 1 of 7)",150,"NM_015790",50723,"Mm.17819","NM_015790","ENSMUSG00000000732","Icosl","AU044799|B7-H2|B7RP-1|B7h|BG071784|GI50|GL50|GL50-B|ICOS-L|Icoslg|LICOS|Ly115l|mKIAA0653","icos ligand","protein-coding"]
[1944,"chr2",119236914,119238378,"+",0,"NA","intron (NM_016907, intron 1 of 10)","CpG",286,"NM_016907",20732,"Mm.104955","NM_016907","ENSMUSG00000027315","Spint1","HAI-1","serine protease inhibitor, Kunitz type 1","protein-coding"]
[3089,"chr7",141468207,141469179,"+",0,"NA","promoter-TSS (NM_001111050)","promoter-TSS (NM_001111050)",-96,"NM_001111050",12476,"Mm.30246","NM_009842","ENSMUSG00000025510","Cd151","PETA-3|SFA-1|Tspan24","CD151 antigen","protein-coding"]
[212,"chr10",41450179,41450747,"+",0,"NA","non-coding (NR_102360, exon 1 of 7)","non-coding (NR_102360, exon 1 of 7)",105,"NR_102360",268294,"Mm.258475","NM_153398","ENSMUSG00000019826","Zbtb24","BC055367|Bif1|Bsg1|ZNF450","zinc finger and BTB domain containing 24","protein-coding"]
[3384,"chr9",57537297,57538064,"+",0,"NA","exon (NM_175273, exon 1 of 4)","exon (NM_175273, exon 1 of 4)",152,"NM_001166364",78323,"Mm.25814","NM_175273","ENSMUSG00000032305","Fam219b","2310046O06Rik|AI594866","family with sequence similarity 219, member B","protein-coding"]
[2436,"chr4",152096402,152097293,"+",0,"NA","exon (NM_001285999, exon 1 of 21)","exon (NM_001285999, exon 1 of 21)",128,"NM_001285999",269608,"Mm.332102","NM_001004156","ENSMUSG00000039713","Plekhg5","BC023181|Syx","pleckstrin homology domain containing, family G (with RhoGef domain) member 5","protein-coding"]
[1331,"chr16",77013734,77014397,"+",0,"NA","promoter-TSS (NM_013918)","promoter-TSS (NM_013918)",-4,"NM_013918",30940,"Mm.40986","NM_013918","ENSMUSG00000022867","Usp25","-","ubiquitin specific peptidase 25","protein-coding"]
[2590,"chr5",111418163,111418806,"+",0,"NA","exon (NM_001081235, exon 1 of 2)","exon (NM_001081235, exon 1 of 2)",318,"NM_001081235",433938,"Mm.332576","NM_001081235","ENSMUSG00000070576","Mn1","AA003644|AA009236","meningioma 1","protein-coding"]
[2383,"chr4",134496540,134497330,"+",0,"NA","promoter-TSS (NM_001285849)","promoter-TSS (NM_001285849)",-106,"NM_001285849",71904,"Mm.142343","NM_027995","ENSMUSG00000037348","Paqr7","2310021M12Rik|AV001994|BB007237|Mpra|PGLP|mPR","progestin and adipoQ receptor family member VII","protein-coding"]
[542,"chr11",78328190,78328859,"+",0,"NA","TTS (NM_009657)","TTS (NM_009657)",102,"NM_201406",276846,"Mm.295908","NM_201406","ENSMUSG00000041958","Pigs","BC058979|Gm393|Gm689","phosphatidylinositol glycan anchor biosynthesis, class S","protein-coding"]
[3114,"chr8",12947583,12948547,"+",0,"NA","TTS (NR_128567)","TTS (NR_128567)",124,"NR_128567",104797311,null,"NR_128567","ENSMUSG00000105030","Gm38671","Mir9768|mmu-mir-9768","predicted gene, 38671","ncRNA"]
[1305,"chr16",33062113,33063067,"+",0,"NA","promoter-TSS (NM_172823)","promoter-TSS (NM_172823)",69,"NM_172823",239833,"Mm.131951","NM_172823","ENSMUSG00000022802","Lmln","5330415H22Rik|AI465495","leishmanolysin-like (metallopeptidase M8 family)","protein-coding"]
[961,"chr13",117602289,117603034,"+",0,"NA","5' UTR (NM_010408, exon 1 of 8)","5' UTR (NM_010408, exon 1 of 8)",341,"NM_010408",15165,"Mm.343429","NM_010408",null,"Hcn1","Bcng1|C630013B14Rik|HAC2","hyperpolarization-activated, cyclic nucleotide-gated K+ 1","protein-coding"]
[2686,"chr5",138754335,138756781,"+",0,"NA","5' UTR (NM_030565, exon 1 of 10)","5' UTR (NM_030565, exon 1 of 10)",477,"NM_030565",80752,"Mm.320355","NM_030565","ENSMUSG00000025854","Fam20c","C76981|DMP-4|DMP4|GEF-CK|mKIAA4081","family with sequence similarity 20, member C","protein-coding"]
[3234,"chr8",105297549,105298452,"+",0,"NA","intron (NM_148952, intron 1 of 9)","intron (NM_148952, intron 1 of 9)",337,"NM_148952",104394,"Mm.34554","NM_148952","ENSMUSG00000014859","E2f4","2010111M04Rik|AI427446","E2F transcription factor 4","protein-coding"]
[2882,"chr7",19282580,19283355,"+",0,"NA","intron (NM_013648, intron 1 of 9)","CpG",343,"NM_013648",20167,"Mm.24142","NM_013648","ENSMUSG00000030401","Rtn2","MMS10-P|Ms10p|NSPLI|Nspl1","reticulon 2 (Z-band associated protein)","protein-coding"]
[2099,"chr3",37348609,37349189,"+",0,"NA","exon (NM_008006, exon 1 of 3)","exon (NM_008006, exon 1 of 3)",246,"NM_008006",14173,"Mm.473689","NM_008006",null,"Fgf2","Fgf-2|Fgfb|bFGF","fibroblast growth factor 2","protein-coding"]
[1662,"chr19",6363374,6363905,"+",0,"NA","promoter-TSS (NM_001110791)","promoter-TSS (NM_001110791)",-51,"NM_011750",22668,"Mm.256422","NM_011750","ENSMUSG00000024949","Sf1","BBP|MZFM|WBP4|Zfp162","splicing factor 1","protein-coding"]
[2476,"chr5",23433617,23435168,"+",0,"NA","promoter-TSS (NR_040469)","promoter-TSS (NR_040469)",-37,"NM_026984",69188,"Mm.205190","NM_026984","ENSMUSG00000029004","Kmt2e","1810033J14Rik|9530077A04Rik|D230038D11Rik|Mll5|NKp44L","lysine (K)-specific methyltransferase 2E","protein-coding"]
[2988,"chr7",98702686,98703813,"+",0,"NA","promoter-TSS (NM_028410)","promoter-TSS (NM_028410)",-114,"NM_028410",72981,"Mm.4428","NM_028410","ENSMUSG00000030753","Prkrir","2900052B10Rik|Dap4|Rpkrir","protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)","protein-coding"]
[574,"chr11",88169460,88170001,"+",0,"NA","5' UTR (NM_001172099, exon 1 of 10)","5' UTR (NM_001172099, exon 1 of 10)",165,"NM_001172099",103841,"Mm.374846","NM_198013","ENSMUSG00000018378","Cuedc1","AI841487|C330016O16Rik","CUE domain containing 1","protein-coding"]
[170,"chr1",185362637,185363572,"+",0,"NA","promoter-TSS (NM_029735)","promoter-TSS (NM_029735)",9,"NM_029735",107508,"Mm.154511","NM_029735","ENSMUSG00000026615","Eprs","2410081F06Rik|3010002K18Rik|C79379|Qprs","glutamyl-prolyl-tRNA synthetase","protein-coding"]
[3397,"chr9",62121991,62122751,"+",0,"NA","TTS (NR_039595)","TTS (NR_039595)",223,"NR_039595",100628602,null,"NR_039595","ENSMUSG00000092696","Mir5133","mir-5133|mmu-mir-5133|mu-mir-5133","microRNA 5133","ncRNA"]
[1921,"chr2",91256534,91257625,"+",0,"NA","promoter-TSS (NM_028733)","promoter-TSS (NM_028733)",-250,"NM_028733",80708,"Mm.236650","NM_028733","ENSMUSG00000027257","Pacsin3","4921507A02Rik|6330413E15Rik|AW413130","protein kinase C and casein kinase substrate in neurons 3","protein-coding"]
[660,"chr11",115334185,115335158,"+",0,"NA","promoter-TSS (NM_027132)","promoter-TSS (NM_027132)",-63,"NM_027132",69602,"Mm.101844","NM_027132","ENSMUSG00000018862","Otop3","2310011E08Rik","otopetrin 3","protein-coding"]
[3217,"chr8",92960421,92961122,"+",0,"NA","promoter-TSS (NM_009209)","promoter-TSS (NM_009209)",-276,"NM_009209",20538,"Mm.57040","NM_009209","ENSMUSG00000055368","Slc6a2","NE-T|NET|Slc6a5","solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2","protein-coding"]
[26,"chr1",42952708,42953517,"+",0,"NA","5' UTR (NM_053107, exon 1 of 2)","5' UTR (NM_053107, exon 1 of 2)",240,"NM_053107",93690,"Mm.444976","NM_053107","ENSMUSG00000041907","Gpr45","9230112G11Rik|AW046772","G protein-coupled receptor 45","protein-coding"]
[2116,"chr3",59005362,59007261,"+",0,"NA","promoter-TSS (NM_177855)","promoter-TSS (NM_177855)",-667,"NM_177855",329650,"Mm.240059","NM_177855","ENSMUSG00000056476","Med12l","A130035F20|A630079M02|AU044581|TRALPUSH","mediator complex subunit 12-like","protein-coding"]
[977,"chr14",20707150,20707881,"+",0,"NA","promoter-TSS (NM_001252082)","promoter-TSS (NM_001252082)",-37,"NM_001252081",268721,"Mm.275082","NM_027996","ENSMUSG00000021819","Zswim8","2310021P13Rik|4832404P21Rik|Kiaa0913|mKIAA0913","zinc finger SWIM-type containing 8","protein-coding"]
[2250,"chr4",41348751,41349582,"+",0,"NA","5' UTR (NM_001290454, exon 1 of 6)","5' UTR (NM_001290454, exon 1 of 6)",170,"NM_023305",67123,"Mm.289795","NM_023305","ENSMUSG00000028437","Ubap1","2700092A01Rik|NAG20|UBAP-1|Ubap","ubiquitin-associated protein 1","protein-coding"]
[566,"chr11",85352555,85353484,"+",0,"NA","promoter-TSS (NM_138681)","promoter-TSS (NM_138681)",-145,"NM_001166642",192197,"Mm.209989","NM_138681","ENSMUSG00000059439","Bcas3","1500019F07Rik|2610028P08Rik|AU021018|BC028339|K20D4|rudhira","breast carcinoma amplified sequence 3","protein-coding"]
[526,"chr11",76243292,76244089,"+",0,"NA","promoter-TSS (NM_026029)","promoter-TSS (NM_026029)",9,"NM_026029",67201,"Mm.482113","NM_026029","ENSMUSG00000017286","Glod4","1700082G03Rik|2700085E05Rik|C81254","glyoxalase domain containing 4","protein-coding"]
[1901,"chr2",74705148,74705824,"+",0,"NA","promoter-TSS (NM_008276)","promoter-TSS (NM_008276)",-3,"NM_001290730",15437,"Mm.280673","NM_008276",null,"Hoxd8","4921540P06Rik|AI047735|Hox-4.3|Hox-5.4","homeobox D8","protein-coding"]
[3500,"chr9",120932909,120933680,"+",0,"NA","promoter-TSS (NM_007614)","promoter-TSS (NM_007614)",-106,"NM_007614",12387,"Mm.291928","NM_007614","ENSMUSG00000006932","Ctnnb1","Bfc|Catnb|Mesc","catenin (cadherin associated protein), beta 1","protein-coding"]
[359,"chr10",127063359,127064065,"+",0,"NA","5' UTR (NM_009870, exon 1 of 8)","5' UTR (NM_009870, exon 1 of 8)",109,"NM_009870",12567,"Mm.6839","NM_009870",null,"Cdk4","Crk3","cyclin-dependent kinase 4","protein-coding"]
[2765,"chr6",55037842,55038498,"+",0,"NA","exon (NM_180678, exon 1 of 17)","exon (NM_180678, exon 1 of 17)",169,"NM_180678",353172,"Mm.250004","NM_180678","ENSMUSG00000029777","Gars","GENA202|Gena201|Nmf249|Sgrp23","glycyl-tRNA synthetase","protein-coding"]
[1229,"chr15",102203312,102204430,"+",0,"NA","promoter-TSS (NM_001289695)","promoter-TSS (NM_001289695)",226,"NM_001289691",68744,"Mm.352945","NM_153194","ENSMUSG00000046897","Zfp740","1110034O07Rik|AW548228|Znf740","zinc finger protein 740","protein-coding"]
[2299,"chr4",98395528,98396232,"+",0,"NA","promoter-TSS (NM_001005784)","promoter-TSS (NM_001005784)",54,"NM_172696",12695,"Mm.90218","NM_007704","ENSMUSG00000061859","Inadl","Cipp|Patj","InaD-like (Drosophila)","protein-coding"]
[108,"chr1",131827945,131828719,"+",0,"NA","5' UTR (NM_173865, exon 1 of 11)","5' UTR (NM_173865, exon 1 of 11)",320,"NM_173865",98396,"Mm.389181","NM_173865","ENSMUSG00000013275","Slc41a1","AI573938|B230315F01Rik","solute carrier family 41, member 1","protein-coding"]
[2820,"chr6",113377623,113378594,"+",0,"NA","promoter-TSS (NM_133932)","promoter-TSS (NM_133932)",-5,"NM_026552",68089,"Mm.289306","NM_026552","ENSMUSG00000079426","Arpc4","20kDa|5330419I20Rik|AI327076|p20-Arc","actin related protein 2/3 complex, subunit 4","protein-coding"]
[604,"chr11",98907596,98908270,"+",0,"NA","promoter-TSS (NM_011799)","promoter-TSS (NM_011799)",44,"NM_001025779",23834,"Mm.20912","NM_011799","ENSMUSG00000017499","Cdc6","CDC18L","cell division cycle 6","protein-coding"]
[2614,"chr5",118027717,118028614,"+",0,"NA","intron (NM_021344, intron 1 of 7)","CpG",341,"NM_021344",57816,"Mm.273285","NM_021344","ENSMUSG00000029359","Tesc","1010001A17Rik|2410011K10Rik|TE-1","tescalcin","protein-coding"]
[2608,"chr5",115564860,115565752,"+",0,"NA","promoter-TSS (NM_172719)","promoter-TSS (NM_172719)",43,"NM_172719",231659,"Mm.153014","NM_172719","ENSMUSG00000041638","Gcn1l1","4932409G22|AL022764|G431004K08Rik|GCN1L|mKIAA0219","GCN1 general control of amino-acid synthesis 1-like 1 (yeast)","protein-coding"]
[1001,"chr14",32159707,32160282,"+",0,"NA","5' UTR (NM_001033988, exon 1 of 10)","5' UTR (NM_001033988, exon 1 of 10)",107,"NM_001033988",27057,"Mm.371598","NM_019744","ENSMUSG00000056234","Ncoa4","ARA70|Rfg","nuclear receptor coactivator 4","protein-coding"]
[232,"chr10",59879332,59880207,"+",0,"NA","exon (NM_019965, exon 1 of 9)","exon (NM_019965, exon 1 of 9)",178,"NM_019965",56709,"Mm.103610","NM_019965","ENSMUSG00000020109","Dnajb12","Dj10|mDj10","DnaJ (Hsp40) homolog, subfamily B, member 12","protein-coding"]
[477,"chr11",68691301,68692414,"+",0,"NA","promoter-TSS (NM_175260)","promoter-TSS (NM_175260)",-58,"NM_175260",77579,"Mm.218233","NM_175260","ENSMUSG00000020900","Myh10","5730504C04Rik|9330167F11Rik|Fltn|Myhn-2|Myhn2|NMHC II-B|NMHC-B|NMHCII-B|NMMHC II-b|NMMHC-B|NMMHC-IIB|SMemb|mKIAA3005","myosin, heavy polypeptide 10, non-muscle","protein-coding"]
[1338,"chr16",91269461,91270750,"+",0,"NA","exon (NM_016968, exon 1 of 1)","exon (NM_016968, exon 1 of 1)",336,"NM_016968",50914,"Mm.39300","NM_016968","ENSMUSG00000046160","Olig1","AI836478|AW494459|Bhlhb6|Olg-1|Oligo1|bHLHe21","oligodendrocyte transcription factor 1","protein-coding"]
[3458,"chr9",107563003,107563611,"+",0,"NA","promoter-TSS (NM_019742)","promoter-TSS (NM_019742)",52,"NM_019742",80385,"Mm.21739","NM_019742","ENSMUSG00000010054","Tusc2","1190001E22Rik|AA407686|Fus1|Lgcc|PAP|Pdap2","tumor suppressor candidate 2","protein-coding"]
[3054,"chr7",128744855,128745456,"+",0,"NA","exon (NM_001029982, exon 1 of 19)","exon (NM_001029982, exon 1 of 19)",285,"NM_001029982",207352,"Mm.297105","NM_001029982","ENSMUSG00000055319","Sec23ip","D7Ertd373e|p125","Sec23 interacting protein","protein-coding"]
[2623,"chr5",122209775,122210425,"+",0,"NA","promoter-TSS (NM_028752)","promoter-TSS (NM_028752)",-187,"NM_028752",74096,"Mm.28804","NM_028752","ENSMUSG00000064267","Hvcn1","0610039P13Rik|AI450555|BTS|HV1|Vsop.|mVSOP","hydrogen voltage-gated channel 1","protein-coding"]
[1182,"chr15",83563371,83564355,"+",0,"NA","intron (NM_009775, intron 1 of 3)","intron (NM_009775, intron 1 of 3)",290,"NM_009775",12257,"Mm.1508","NM_009775","ENSMUSG00000041736","Tspo","Bzrp|IBP|PBR|Tspo1","translocator protein","protein-coding"]
[225,"chr10",50592477,50593078,"+",0,"NA","5' UTR (NM_198007, exon 1 of 42)","5' UTR (NM_198007, exon 1 of 42)",108,"NM_198007",77987,"Mm.222497","NM_198007","ENSMUSG00000038774","Ascc3","ASC1p200|B630009I04Rik|BC023451|D430001L07Rik|D630041L21|Helic1|RNAH","activating signal cointegrator 1 complex subunit 3","protein-coding"]
[1447,"chr17",34981739,34982509,"+",0,"NA","promoter-TSS (NM_030597)","promoter-TSS (NM_030597)",-6,"NM_001204273",27756,"Mm.165735","NM_030597","ENSMUSG00000007050","Lsm2","D17H6S56E-2|D17H6S56E2|Dmapl|Dmpkap|G7b|Sm-X5|SmX5|snRNP","LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)","protein-coding"]
[330,"chr10",94514569,94515683,"+",0,"NA","intron (NM_172051, intron 1 of 3)","CpG",269,"NM_172051",319880,"Mm.23047","NM_172051","ENSMUSG00000020023","Tmcc3","AW488095|C630016B22Rik|C88213|Tmcc1","transmembrane and coiled coil domains 3","protein-coding"]
[142,"chr1",159231817,159232361,"+",0,"NA","promoter-TSS (NM_011931)","promoter-TSS (NM_011931)",-237,"NM_011931",26374,"Mm.328135","NM_011931","ENSMUSG00000040782","Rfwd2","AI316802|C80879|Cop1","ring finger and WD repeat domain 2","protein-coding"]
[207,"chr10",36974055,36975289,"+",0,"NA","5' UTR (NM_008229, exon 1 of 14)","5' UTR (NM_008229, exon 1 of 14)",128,"NM_008229",15182,"Mm.19806","NM_008229","ENSMUSG00000019777","Hdac2","D10Wsu179e|YAF1|Yy1bp|mRPD3","histone deacetylase 2","protein-coding"]
[1510,"chr17",78200167,78201155,"+",0,"NA","5' UTR (NM_015800, exon 1 of 17)","5' UTR (NM_015800, exon 1 of 17)",413,"NM_015800",50766,"Mm.311912","NM_015800","ENSMUSG00000024074","Crim1","AU015004","cysteine rich transmembrane BMP regulator 1 (chordin like)","protein-coding"]
[48,"chr1",62702941,62703815,"+",0,"NA","promoter-TSS (NM_001077406)","promoter-TSS (NM_001077406)",61,"NM_001077405",18187,"Mm.266341","NM_010939","ENSMUSG00000025969","Nrp2","1110048P06Rik|Np-2|Np2|Npn-2|Npn2","neuropilin 2","protein-coding"]
[1857,"chr2",32687416,32688297,"+",0,"NA","promoter-TSS (NR_106168)","promoter-TSS (NR_106168)",-90,"NR_106168",102465885,null,"NR_106168","ENSMUSG00000098972","Mir8093","Gm27548|mmu-mir-8093","microRNA 8093","ncRNA"]
[360,"chr10",127164974,127165697,"+",0,"NA","promoter-TSS (NM_001244618)","promoter-TSS (NM_001244618)",179,"NM_001244617",14421,"Mm.386762","NM_008080","ENSMUSG00000006731","B4galnt1","4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2","beta-1,4-N-acetyl-galactosaminyl transferase 1","protein-coding"]
[3416,"chr9",73039268,73040003,"+",0,"NA","promoter-TSS (NM_018889)","promoter-TSS (NM_018889)",64,"NM_018889",55981,"Mm.139905","NM_018889","ENSMUSG00000079469","Pigb","Pig-b","phosphatidylinositol glycan anchor biosynthesis, class B","protein-coding"]
[3170,"chr8",70797514,70798254,"+",0,"NA","promoter-TSS (NR_106099)","promoter-TSS (NR_106099)",-251,"NR_106099",102466823,null,"NR_106099","ENSMUSG00000099031","Mir7240","Gm27487|mmu-mir-7240","microRNA 7240","ncRNA"]
[3160,"chr8",69901401,69903554,"+",0,"NA","promoter-TSS (NM_023312)","promoter-TSS (NM_023312)",81,"NM_023312",67184,"Mm.21162","NM_023312","ENSMUSG00000036199","Ndufa13","2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19","NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13","protein-coding"]
[3279,"chr8",120535783,120536528,"+",0,"NA","intron (NM_001145897, intron 1 of 15)","CpG",298,"NM_001145897",382034,"Mm.334856","NM_198671","ENSMUSG00000031822","Gse1","2210013I18Rik|mKIAA0182","genetic suppressor element 1","protein-coding"]
[3377,"chr9",55208774,55209594,"+",0,"NA","exon (NM_028049, exon 1 of 7)","exon (NM_028049, exon 1 of 7)",249,"NM_028049",71999,"Mm.276429","NM_028049","ENSMUSG00000032309","Fbxo22","0610033L19Rik|1600016C16Rik","F-box protein 22","protein-coding"]
[2321,"chr4",115056364,115057248,"+",0,"NA","intron (NM_011527, intron 1 of 4)","CpG",380,"NM_011527",21349,"Mm.239869","NM_011527","ENSMUSG00000028717","Tal1","SCL/tal-1|Scl|bHLHa17|tal-1","T cell acute lymphocytic leukemia 1","protein-coding"]
[1988,"chr2",144270090,144271186,"+",0,"NA","promoter-TSS (NM_001289631)","promoter-TSS (NM_001289631)",-66,"NM_024225",69178,"Mm.273379","NM_024225","ENSMUSG00000027423","Snx5","0910001N05Rik|1810032P22Rik|AU019504|D2Ertd52e","sorting nexin 5","protein-coding"]
[3135,"chr8",33599394,33600429,"+",0,"NA","5' UTR (NM_017374, exon 1 of 7)","5' UTR (NM_017374, exon 1 of 7)",290,"NM_017374",19053,"Mm.29301","NM_017374","ENSMUSG00000009630","Ppp2cb","AI115466|D8Ertd766e|PP2Ac","protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform","protein-coding"]
[1076,"chr14",119137410,119138835,"+",0,"NA","promoter-TSS (NM_015820)","promoter-TSS (NM_015820)",-143,"NM_015820",50787,"Mm.445777","NM_015820",null,"Hs6st3","6OST3|HS6ST-3","heparan sulfate 6-O-sulfotransferase 3","protein-coding"]
[3082,"chr7",141228311,141229417,"+",0,"NA","promoter-TSS (NM_001081118)","promoter-TSS (NM_001081118)",76,"NM_001081118",101471,"Mm.248656","NM_207211","ENSMUSG00000038611","Phrf1","AA673488","PHD and ring finger domains 1","protein-coding"]
[766,"chr12",76533023,76534277,"+",0,"NA","promoter-TSS (NM_153804)","promoter-TSS (NM_153804)",90,"NM_153804",263406,"Mm.291854","NM_153804","ENSMUSG00000052609","Plekhg3","BC030417","pleckstrin homology domain containing, family G (with RhoGef domain) member 3","protein-coding"]
[449,"chr11",58306907,58307938,"+",0,"NA","intron (NM_001040686, intron 1 of 11)","CpG",353,"NM_001040686",103836,"Mm.41440","NM_182996","ENSMUSG00000037243","Zfp692","AI746306|AI839920|Zfp692-ps|Znf692","zinc finger protein 692","protein-coding"]
[1574,"chr18",44828499,44829043,"+",0,"NA","exon (NM_001163013, exon 1 of 30)","exon (NM_001163013, exon 1 of 30)",106,"NM_001163013",240255,"Mm.244482","NM_001163013","ENSMUSG00000034653","Ythdc2","3010002F02Rik|BC037178","YTH domain containing 2","protein-coding"]
[3506,"chr9",122746979,122747764,"+",0,"NA","promoter-TSS (NM_001199736)","promoter-TSS (NM_001199736)",25,"NM_001199736",671232,"Mm.296421","NM_001199736","ENSMUSG00000094985","Topaz1","Gm9524","testis and ovary specific PAZ domain containing 1","protein-coding"]
[1579,"chr18",56572590,56573422,"+",0,"NA","promoter-TSS (NM_001127338)","promoter-TSS (NM_001127338)",-67,"NM_001127338",110695,"Mm.30250","NM_138600","ENSMUSG00000053644","Aldh7a1","Atq1|D18Wsu181e","aldehyde dehydrogenase family 7, member A1","protein-coding"]
[659,"chr11",115182392,115183324,"+",0,"NA","TTS (NM_025400)","TTS (NM_025400)",4458,"NM_025400",66176,"Mm.86823","NM_025400","ENSMUSG00000015542","Nat9","1110028N05Rik","N-acetyltransferase 9 (GCN5-related, putative)","protein-coding"]
[2774,"chr6",71543743,71544555,"+",0,"NA","intron (NM_025783, intron 1 of 5)","CpG",295,"NM_025783",66700,"Mm.181278","NM_025783","ENSMUSG00000053119","Chmp3","25.1|4921505F14Rik|9130011K15Rik|CGI-49|D6Ertd286e|NEDF|Vps24","charged multivesicular body protein 3","protein-coding"]
[2763,"chr6",54594920,54595751,"+",0,"NA","5' UTR (NM_001164361, exon 1 of 14)","5' UTR (NM_001164361, exon 1 of 14)",224,"NM_001164361",231999,"Mm.35416","NM_001001335","ENSMUSG00000005225","Plekha8","6330400G01|AA517676|BC052360|Fapp-2|Fapp2","pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8","protein-coding"]
[1141,"chr15",76457254,76458369,"+",0,"NA","exon (NM_198885, exon 1 of 2)","exon (NM_198885, exon 1 of 2)",373,"NM_198885",20289,"Mm.322821","NM_198885","ENSMUSG00000034161","Scx","BB114693|Bhlha41|Scl","scleraxis","protein-coding"]
[682,"chr11",117848526,117849611,"+",0,"NA","promoter-TSS (NM_009689)","promoter-TSS (NM_009689)",-169,"NM_001012273",11799,"Mm.8552","NM_009689","ENSMUSG00000017716","Birc5","AAC-11|Api4|TIAP|survivin40","baculoviral IAP repeat-containing 5","protein-coding"]
[2971,"chr7",80325162,80325861,"+",0,"NA","3' UTR (NM_133952, exon 20 of 20)","3' UTR (NM_133952, exon 20 of 20)",-1057,"NM_173445",269955,"Mm.474502","NM_173445","ENSMUSG00000038930","Rccd1","5830436H09|E430018M08Rik","RCC1 domain containing 1","protein-coding"]
[353,"chr10",122448485,122449760,"+",0,"NA","exon (NM_016847, exon 1 of 2)","exon (NM_016847, exon 1 of 2)",623,"NM_016847",54140,"Mm.4351","NM_016847","ENSMUSG00000020123","Avpr1a","AVPR|Avpr1|V1a|V1aR","arginine vasopressin receptor 1A","protein-coding"]
[375,"chr11",3894561,3895518,"+",0,"NA","promoter-TSS (NM_026150)","promoter-TSS (NM_026150)",87,"NM_026150",67430,"Mm.347950","NM_026150","ENSMUSG00000020434","4921536K21Rik","AV043724","RIKEN cDNA 4921536K21 gene","protein-coding"]
[2989,"chr7",98834493,98835481,"+",0,"NA","promoter-TSS (NM_001285794)","promoter-TSS (NM_001285794)",-125,"NM_001285794",22411,"Mm.22182","NM_009519","ENSMUSG00000015957","Wnt11","-","wingless-type MMTV integration site family, member 11","protein-coding"]
[984,"chr14",26668495,26670173,"+",0,"NA","TTS (NR_106132)","TTS (NR_106132)",274,"NR_106132",102465773,null,"NR_106132","ENSMUSG00000098751","Mir7672","Gm27314|mmu-mir-7672","microRNA 7672","ncRNA"]
[2833,"chr6",117916776,117917504,"+",0,"NA","promoter-TSS (NM_001166427)","promoter-TSS (NM_001166427)",-154,"NM_001166427",98758,"Mm.422979","NM_133834","ENSMUSG00000042079","Hnrnpf","4833420I20Rik|AA407306|Hnrpf","heterogeneous nuclear ribonucleoprotein F","protein-coding"]
[2409,"chr4",139643406,139644063,"+",0,"NA","promoter-TSS (NR_105987)","promoter-TSS (NR_105987)",-308,"NR_105987",102465617,null,"NR_105987","ENSMUSG00000098569","Mir7020","Gm27759|mmu-mir-7020","microRNA 7020","ncRNA"]
[1155,"chr15",79001943,79002653,"+",0,"NA","promoter-TSS (NR_105921)","promoter-TSS (NR_105921)",75,"NR_105921",102465577,null,"NR_105921","ENSMUSG00000099180","Mir6956","Gm27880|mmu-mir-6956","microRNA 6956","ncRNA"]
[3372,"chr9",54286267,54287022,"+",0,"NA","exon (NM_177350, exon 1 of 10)","exon (NM_177350, exon 1 of 10)",158,"NM_177350",235379,"Mm.123549","NM_177350","ENSMUSG00000046167","Gldn","CRG-L2|Clom|Colm|Crgl2|Crlg2","gliomedin","protein-coding"]
[1485,"chr17",56009024,56009691,"+",0,"NA","exon (NM_026530, exon 2 of 13)","exon (NM_026530, exon 2 of 13)",156,"NM_026530",68047,"Mm.358710","NM_026530","ENSMUSG00000003199","Mpnd","E130307M08Rik","MPN domain containing","protein-coding"]
[788,"chr12",85219135,85220181,"+",0,"NA","exon (NM_145445, exon 1 of 8)","exon (NM_145445, exon 1 of 8)",177,"NM_145445",217715,"Mm.29041","NM_145445","ENSMUSG00000004788","Eif2b2","EIF-2Bbeta|EIF2B","eukaryotic translation initiation factor 2B, subunit 2 beta","protein-coding"]
[128,"chr1",139421985,139422848,"+",0,"NA","promoter-TSS (NM_172643)","promoter-TSS (NM_172643)",33,"NM_172643",226470,"Mm.119711","NM_172643","ENSMUSG00000033964","Zbtb41","8430415N23Rik|9430031N01|9830132G07Rik|AI316857","zinc finger and BTB domain containing 41 homolog","protein-coding"]
[501,"chr11",71750544,71751555,"+",0,"NA","intron (NM_177618, intron 1 of 8)","CpG",346,"NM_177618",216881,"Mm.48648","NM_177618","ENSMUSG00000020811","Wscd1","mKIAA0523","WSC domain containing 1","protein-coding"]
[2944,"chr7",51861147,51862421,"+",0,"NA","exon (NM_001115087, exon 1 of 1)","exon (NM_001115087, exon 1 of 1)",483,"NM_001115087",100040608,"Mm.322643","NM_001115087","ENSMUSG00000092118","Fancf","A730016A17","Fanconi anemia, complementation group F","protein-coding"]
[1313,"chr16",37011622,37012303,"+",0,"NA","exon (NM_029977, exon 1 of 30)","exon (NM_029977, exon 1 of 30)",176,"NM_001159369",77782,"Mm.259114","NM_029977","ENSMUSG00000034206","Polq","A430110D14Rik","polymerase (DNA directed), theta","protein-coding"]
[278,"chr10",79988289,79989602,"+",0,"NA","intron (NM_007725, intron 1 of 6)","intron (NM_007725, intron 1 of 6)",345,"NM_007725",12798,"Mm.157770","NM_007725",null,"Cnn2","AA408047|AI324678|Calpo2","calponin 2","protein-coding"]
[1617,"chr18",80255772,80257137,"+",0,"NA","intron (NM_025861, intron 1 of 5)","CpG",148,"NM_001164423",66943,"Mm.29247","NM_025861","ENSMUSG00000034006","Pqlc1","2310009N05Rik|4933425L21Rik|5730564E11Rik|C78974","PQ loop repeat containing 1","protein-coding"]
[3521,"chrX",98937692,98938409,"+",0,"NA","5' UTR (NM_207633, exon 1 of 7)","5' UTR (NM_207633, exon 1 of 7)",269,"NM_207633",77929,"Mm.212290","NM_207633","ENSMUSG00000047694","Yipf6","A430107J06Rik","Yip1 domain family, member 6","protein-coding"]
[3144,"chr8",45975031,45975850,"+",0,"NA","promoter-TSS (NM_001033148)","promoter-TSS (NM_001033148)",-88,"NM_138668",192169,"Mm.210882","NM_138668","ENSMUSG00000031634","Ufsp2","1810047C23Rik","UFM1-specific peptidase 2","protein-coding"]
[490,"chr11",69935309,69936544,"+",0,"NA","promoter-TSS (NM_016875)","promoter-TSS (NM_016875)",27,"NM_016875",53422,"Mm.29286","NM_016875","ENSMUSG00000018554","Ybx2","Msy2","Y box protein 2","protein-coding"]
[2650,"chr5",128735913,128736596,"+",0,"NA","promoter-TSS (NM_021311)","promoter-TSS (NM_021311)",8,"NM_021311",57749,"Mm.272720","NM_021311","ENSMUSG00000029423","Piwil1","MIWI","piwi-like RNA-mediated gene silencing 1","protein-coding"]
[1843,"chr2",31469388,31470780,"+",0,"NA","promoter-TSS (NR_002687)","promoter-TSS (NR_002687)",-186,"NM_007494",11898,"Mm.3217","NM_007494","ENSMUSG00000076441","Ass1","AA408052|ASS|Ass-1|fold","argininosuccinate synthetase 1","protein-coding"]
[155,"chr1",174501757,174502863,"+",0,"NA","exon (NM_019445, exon 1 of 18)","exon (NM_019445, exon 1 of 18)",485,"NM_019445",54418,"Mm.330620","NM_019445","ENSMUSG00000028354","Fmn2","AU024104","formin 2","protein-coding"]
[387,"chr11",11113817,11114724,"+",0,"NA","5' UTR (NM_177033, exon 1 of 4)","5' UTR (NM_177033, exon 1 of 4)",254,"NM_177033",319922,"Mm.337851","NM_177033","ENSMUSG00000050830","Vwc2","A930041G11Rik|G11|PSST739|UNQ739|cradin","von Willebrand factor C domain containing 2","protein-coding"]
[2626,"chr5",122372033,122372768,"+",0,"NA","promoter-TSS (NM_026883)","promoter-TSS (NM_026883)",-108,"NM_024216",68080,"Mm.266328","NM_024216","ENSMUSG00000029464","Gpn3","A930018B01Rik|Atpbd1c|D5Ertd708e","GPN-loop GTPase 3","protein-coding"]
[1913,"chr2",83812422,83813067,"+",0,"NA","promoter-TSS (NM_175514)","promoter-TSS (NM_175514)",16,"NM_175514",241520,"Mm.330351","NM_175514","ENSMUSG00000048388","Fam171b","D430039N05Rik","family with sequence similarity 171, member B","protein-coding"]
[1112,"chr15",58415090,58415716,"+",0,"NA","promoter-TSS (NM_145959)","promoter-TSS (NM_145959)",-65,"NM_145959",210998,"Mm.3224","NM_145959","ENSMUSG00000037119","D15Ertd621e","AV220772|BC033609|Fam91a1|SKIN|mKIAA0493","DNA segment, Chr 15, ERATO Doi 621, expressed","protein-coding"]
[626,"chr11",102604312,102604876,"+",0,"NA","5' UTR (NM_020510, exon 1 of 1)","5' UTR (NM_020510, exon 1 of 1)",163,"NM_020510",57265,"Mm.36416","NM_020510","ENSMUSG00000050288","Fzd2","AL033370|AW456835|Fz10|Fzd10|Mfz10|Mfz10a","frizzled homolog 2 (Drosophila)","protein-coding"]
[1294,"chr16",31663276,31664601,"+",0,"NA","promoter-TSS (NM_001252433)","promoter-TSS (NM_001252433)",3,"NM_001252434",13383,"Mm.382","NM_007862","ENSMUSG00000022770","Dlg1","B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187","discs, large homolog 1 (Drosophila)","protein-coding"]
[461,"chr11",60699652,60700225,"+",0,"NA","exon (NM_001159405, exon 1 of 22)","exon (NM_001159405, exon 1 of 22)",248,"NM_008502",16897,"Mm.285453","NM_008502","ENSMUSG00000020536","Llgl1","AI325176|Lgl1|Llglh|Mgl1","lethal giant larvae homolog 1 (Drosophila)","protein-coding"]
[2712,"chr5",145166899,145167743,"+",0,"NA","promoter-TSS (NM_133735)","promoter-TSS (NM_133735)",108,"NM_001291248",54188,"Mm.196884","NM_178576","ENSMUSG00000029625","Cpsf4","30kDa|C79664","cleavage and polyadenylation specific factor 4","protein-coding"]
[1562,"chr18",36528080,36528844,"+",0,"NA","intron (NM_001271547, intron 1 of 19)","intron (NM_001271547, intron 1 of 19)",310,"NM_001271544",240215,"Mm.135463","NM_172830","ENSMUSG00000024485","Slc4a9","AE4|D630003B07|D630024F24Rik","solute carrier family 4, sodium bicarbonate cotransporter, member 9","protein-coding"]
[1426,"chr17",29490712,29491583,"+",0,"NA","exon (NM_008842, exon 1 of 6)","exon (NM_008842, exon 1 of 6)",102,"NM_008842",18712,"Mm.405293","NM_008842",null,"Pim1","Pim-1","proviral integration site 1","protein-coding"]
[257,"chr10",76562146,76562778,"+",0,"NA","promoter-TSS (NR_045354)","promoter-TSS (NR_045354)",190,"NM_029661",76573,"Mm.45611","NM_029661","ENSMUSG00000009115","Spatc1l","1700022B01Rik|1700027D21Rik|AA062323","spermatogenesis and centriole associated 1 like","protein-coding"]
[3451,"chr9",106202791,106203507,"+",0,"NA","promoter-TSS (NM_011876)","promoter-TSS (NM_011876)",41,"NM_011876",23999,"Mm.274346","NM_011876","ENSMUSG00000023277","Twf2","A6-related|AU014993|Ptk9l|Ptk9r","twinfilin, actin-binding protein, homolog 2 (Drosophila)","protein-coding"]
[1358,"chr17",12318139,12318989,"+",0,"NA","promoter-TSS (NM_011948)","promoter-TSS (NM_011948)",96,"NM_011948",26407,"Mm.28587","NM_011948","ENSMUSG00000014426","Map3k4","D17Rp17|D17Rp17e|MAPKKK4|MEKK 4|MTK1|Mek4b|Mekk4|RP17|Rp17a|Tas|mKIAA0213","mitogen-activated protein kinase kinase kinase 4","protein-coding"]
[951,"chr13",108315937,108316928,"+",0,"NA","promoter-TSS (NM_178683)","promoter-TSS (NM_178683)",95,"NM_178683",218581,"Mm.32318","NM_178683","ENSMUSG00000021697","Depdc1b","9830132O03|AW260467|XTP1","DEP domain containing 1B","protein-coding"]
[782,"chr12",84408457,84409244,"+",0,"NA","promoter-TSS (NM_028377)","promoter-TSS (NM_028377)",179,"NM_007647",12499,"Mm.10211","NM_007647","ENSMUSG00000021236","Entpd5","AI196558|AI987697|Cd39l4|ER-UDPase|NTPDase-5|NTPDase5|Pcph|mNTPase","ectonucleoside triphosphate diphosphohydrolase 5","protein-coding"]
[85,"chr1",91494346,91495244,"+",0,"NA","exon (NM_028718, exon 1 of 15)","exon (NM_028718, exon 1 of 15)",127,"NM_028718",74019,"Mm.318430","NM_028718","ENSMUSG00000034292","Traf3ip1","3930402D05Rik|AU041749|MIP-T3","TRAF3 interacting protein 1","protein-coding"]
[809,"chr12",103532416,103533491,"+",0,"NA","intron (NM_028980, intron 1 of 24)","intron (NM_028980, intron 1 of 24)",388,"NM_028980",74521,"Mm.248619","NM_028980","ENSMUSG00000021209","Ppp4r4","8430415E04Rik|mKIAA1622","protein phosphatase 4, regulatory subunit 4","protein-coding"]
[2200,"chr3",135438513,135439691,"+",0,"NA","promoter-TSS (NR_030689)","promoter-TSS (NR_030689)",343,"NM_025356",66105,"Mm.49884","NM_025356","ENSMUSG00000078578","Ube2d3","1100001F19Rik|9430029A22Rik|AA414951","ubiquitin-conjugating enzyme E2D 3","protein-coding"]
[1156,"chr15",79027625,79028362,"+",0,"NA","promoter-TSS (NM_008197)","promoter-TSS (NM_008197)",-219,"NM_008197",14958,"Mm.24350","NM_008197","ENSMUSG00000096210","H1f0","D130017D06Rik|H1(0)|H1fv","H1 histone family, member 0","protein-coding"]
[2281,"chr4",59002820,59003773,"+",0,"NA","exon (NM_001033165, exon 1 of 4)","exon (NM_001033165, exon 1 of 4)",103,"NM_001033165",72429,"Mm.317801","NM_001033165",null,"Dnajc25","2010109C08Rik|2010203O07Rik","DnaJ (Hsp40) homolog, subfamily C, member 25","protein-coding"]
[1557,"chr18",35118805,35119546,"+",0,"NA","intron (NM_009818, intron 1 of 17)","CpG",263,"NM_009818",12385,"Mm.18962","NM_009818","ENSMUSG00000037815","Ctnna1","2010010M04Rik|AA517462|AI988031|Catna1","catenin (cadherin associated protein), alpha 1","protein-coding"]
[1486,"chr17",56078894,56079873,"+",0,"NA","promoter-TSS (NM_001304785)","promoter-TSS (NM_001304785)",-248,"NM_001304784",15193,"Mm.12966","NM_008233","ENSMUSG00000002833","Hdgfrp2","HRP-2","hepatoma-derived growth factor, related protein 2","protein-coding"]
[425,"chr11",51584332,51585317,"+",0,"NA","promoter-TSS (NM_028398)","promoter-TSS (NM_028398)",67,"NM_028398",72947,"Mm.256875","NM_028398",null,"Phykpl","2900006B13Rik|Agxt2l2","5-phosphohydroxy-L-lysine phospholyase","protein-coding"]
[3057,"chr7",130935808,130937136,"+",0,"NA","exon (NM_019564, exon 1 of 9)","exon (NM_019564, exon 1 of 9)",269,"NM_019564",56213,"Mm.30156","NM_019564","ENSMUSG00000006205","Htra1","AI429470|HTRA|L56|Prss11|RSPP11","HtrA serine peptidase 1","protein-coding"]
[2056,"chr2",167931951,167933021,"+",0,"NA","5' UTR (NM_011201, exon 1 of 9)","5' UTR (NM_011201, exon 1 of 9)",159,"NM_011201",19246,"Mm.277916","NM_011201","ENSMUSG00000027540","Ptpn1","PTP-1B|PTP-HA2|PTP1B","protein tyrosine phosphatase, non-receptor type 1","protein-coding"]
[736,"chr12",30911544,30912345,"+",0,"NA","promoter-TSS (NM_001110239)","promoter-TSS (NM_001110239)",275,"NM_013709",24057,"Mm.218624","NM_013709","ENSMUSG00000020669","Sh3yl1","AI314953|Ray|YSC84","Sh3 domain YSC-like 1","protein-coding"]
[2876,"chr7",15948386,15949033,"+",0,"NA","TTS (NM_153068)","TTS (NM_153068)",-2601,"NM_133831",68077,"Mm.277634","NM_133831",null,"Gltscr2","5330430H08Rik|9430097C02Rik|AU041936|AW536441|PICT-1|R74911","glioma tumor suppressor candidate region gene 2","protein-coding"]
[539,"chr11",78188723,78189591,"+",0,"NA","5' UTR (NM_033475, exon 1 of 10)","5' UTR (NM_033475, exon 1 of 10)",409,"NM_033475",19376,"Mm.275864","NM_033475","ENSMUSG00000002059","Rab34","AI326479|Narr|Rah|Rah1","RAB34, member RAS oncogene family","protein-coding"]
[3428,"chr9",86571456,86572630,"+",0,"NA","promoter-TSS (NM_027100)","promoter-TSS (NM_027100)",-10,"NM_001145968",69519,"Mm.272517","NM_027100","ENSMUSG00000032417","Rwdd2a","1700030C20Rik|AI848608|Rwdd2","RWD domain containing 2A","protein-coding"]
[781,"chr12",84316652,84317746,"+",0,"NA","5' UTR (NM_001252582, exon 1 of 8)","5' UTR (NM_001252582, exon 1 of 8)",340,"NM_001252583",52708,"Mm.255150","NM_144833","ENSMUSG00000042472","Zfp410","Apa1|D12Ertd748e|Znf410","zinc finger protein 410","protein-coding"]
[2847,"chr6",125131399,125132220,"+",0,"NA","promoter-TSS (NM_138747)","promoter-TSS (NM_138747)",-74,"NM_138747",110109,"Mm.29203","NM_138747","ENSMUSG00000038279","Nop2","120kDa|A530002O17|Nol1","NOP2 nucleolar protein","protein-coding"]
[3233,"chr8",105269460,105270151,"+",0,"NA","promoter-TSS (NR_045689)","promoter-TSS (NR_045689)",4,"NM_001256044",26386,"Mm.89204","NM_011939","ENSMUSG00000033249","Hsf4","HSF 4|HSTF 4|HSTF4|ldis1|mHSF4","heat shock transcription factor 4","protein-coding"]
[3015,"chr7",112022805,112024071,"+",0,"NA","promoter-TSS (NM_177249)","promoter-TSS (NM_177249)",-68,"NM_133758",74996,"Mm.16974","NM_133758","ENSMUSG00000059263","Usp47","4930502N04Rik|A630020C16Rik","ubiquitin specific peptidase 47","protein-coding"]
[3339,"chr9",31030119,31031132,"+",0,"NA","promoter-TSS (NM_172765)","promoter-TSS (NM_172765)",-19,"NM_001115130",235132,"Mm.239355","NM_172765","ENSMUSG00000047412","Zbtb44","6030404E16Rik|Btbd15|E230011F09","zinc finger and BTB domain containing 44","protein-coding"]
[1950,"chr2",120849813,120850831,"+",0,"NA","promoter-TSS (NM_001024856)","promoter-TSS (NM_001024856)",96,"NM_001024857",140810,"Mm.275698","NM_080788","ENSMUSG00000090100","Ttbk2","2610507N02Rik|AI326283|B930008N24Rik|TTK|Ttbk|Ttbk1|mKIAA0847","tau tubulin kinase 2","protein-coding"]
[2865,"chr7",3414763,3415365,"+",0,"NA","promoter-TSS (NR_128566)","promoter-TSS (NR_128566)",-2,"NR_128566",104795667,null,"NR_128566","ENSMUSG00000094210","Gm23450","Mir935|mmu-mir-935","predicted gene, 23450","ncRNA"]
[1698,"chr19",18631228,18632080,"+",0,"NA","promoter-TSS (NM_145497)","promoter-TSS (NM_145497)",159,"NM_017375",20409,"Mm.172222","NM_017375",null,"Ostf1","C78236|SH3P2|Sh3d3","osteoclast stimulating factor 1","protein-coding"]
[520,"chr11",75651389,75651896,"+",0,"NA","promoter-TSS (NM_001080774)","promoter-TSS (NM_001080774)",133,"NM_008659",17913,"Mm.234502","NM_008659","ENSMUSG00000017774","Myo1c","C80397|MMIb|MYO1E|NMI|mm1beta|myr2","myosin IC","protein-coding"]
[2782,"chr6",83136851,83137535,"+",0,"NA","5' UTR (NM_009106, exon 1 of 13)","5' UTR (NM_009106, exon 1 of 13)",109,"NM_009106",20166,"Mm.4139","NM_009106","ENSMUSG00000034930","Rtkn","-","rhotekin","protein-coding"]
[2037,"chr2",164460789,164461753,"+",0,"NA","intron (NM_025575, intron 1 of 3)","CpG",300,"NM_025575",66460,"Mm.44218","NM_025575","ENSMUSG00000045503","Sys1","2610042O14Rik|AI266964|C87389","SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)","protein-coding"]
[532,"chr11",77930608,77931561,"+",0,"NA","exon (NM_021286, exon 1 of 17)","exon (NM_021286, exon 1 of 17)",245,"NM_021286",20370,"Mm.229330","NM_021286","ENSMUSG00000000632","Sez6","BSRP-C|D11Bhm177e|sez-6","seizure related gene 6","protein-coding"]
[1193,"chr15",87544274,87545262,"+",0,"NA","intron (NM_001252310, intron 1 of 3)","CpG",469,"NM_001252310",106014,"Mm.244319","NM_134096","ENSMUSG00000054863","Fam19a5","TAFA5|Tafa-5|Tara-5","family with sequence similarity 19, member A5","protein-coding"]
[2455,"chr4",155811994,155813212,"+",0,"NA","exon (NM_207678, exon 1 of 11)","exon (NM_207678, exon 1 of 11)",114,"NM_207678",56036,"Mm.23492","NM_018856","ENSMUSG00000029068","Ccnl2","1700010A01Rik|1810019L15Rik|2010319M22Rik|AA409936|AW261738|Ania-6b|HCLA-150|Pcee|SB138","cyclin L2","protein-coding"]
[55,"chr1",74332287,74332850,"+",0,"NA","promoter-TSS (NM_019999)","promoter-TSS (NM_019999)",-42,"NM_019999",56695,"Mm.384726","NM_019999","ENSMUSG00000026179","Pnkd","2210013N15Rik|2810403H05Rik|AI854243|Brp17|MNCb-5687|MR-1|Tahccp2","paroxysmal nonkinesiogenic dyskinesia","protein-coding"]
[1890,"chr2",69861492,69862128,"+",0,"NA","intron (NM_009278, intron 1 of 11)","CpG",248,"NM_009278",20823,"Mm.10508","NM_009278","ENSMUSG00000068882","Ssb","SS-B","Sjogren syndrome antigen B","protein-coding"]
[1681,"chr19",8871279,8872162,"+",0,"NA","exon (NM_146093, exon 2 of 10)","exon (NM_146093, exon 2 of 10)",161,"NM_146093",225896,"Mm.27839","NM_146093","ENSMUSG00000071655","Ubxn1","2B28|4930455J02Rik|D19Ertd721e|T25529","UBX domain protein 1","protein-coding"]
[57,"chr1",74791936,74792471,"+",0,"NA","exon (NM_009518, exon 1 of 4)","exon (NM_009518, exon 1 of 4)",184,"NM_009518",22409,"Mm.5130","NM_009518",null,"Wnt10a","-","wingless-type MMTV integration site family, member 10A","protein-coding"]
[2642,"chr5",124445026,124446424,"+",0,"NA","promoter-TSS (NM_001310727)","promoter-TSS (NM_001310727)",226,"NM_001310723",67956,"Mm.137966","NM_030241","ENSMUSG00000049327","Setd8","2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07","SET domain containing (lysine methyltransferase) 8","protein-coding"]
[872,"chr13",38204725,38205410,"+",0,"NA","exon (NM_026382, exon 1 of 9)","exon (NM_026382, exon 1 of 9)",128,"NM_026382",67797,"Mm.250783","NM_026382","ENSMUSG00000021431","Snrnp48","1110050F08Rik|6530403A03Rik|C6orf151","small nuclear ribonucleoprotein 48 (U11/U12)","protein-coding"]
[2354,"chr4",127169109,127169818,"+",0,"NA","intron (NM_198618, intron 1 of 11)","CpG",259,"NM_198618",242667,"Mm.331885","NM_198618","ENSMUSG00000042388","Dlgap3","BC058433|DAP-3|DAP3|Prpl8|Sapap3","discs, large (Drosophila) homolog-associated protein 3","protein-coding"]
[3479,"chr9",110131748,110132335,"+",0,"NA","promoter-TSS (NM_009211)","promoter-TSS (NM_009211)",17,"NM_009211",20588,"Mm.85410","NM_009211","ENSMUSG00000032481","Smarcc1","AI115498|BAF155|Rsc8|SRG3|msp3","SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1","protein-coding"]
[3435,"chr9",95954594,95955378,"+",0,"NA","intron (NM_001311130, intron 1 of 41)","CpG",226,"NM_001311130",24127,"Mm.291179","NM_011916","ENSMUSG00000032410","Xrn1","Dhm2|exo|mXrn1","5'-3' exoribonuclease 1","protein-coding"]
[1146,"chr15",76671570,76672095,"+",0,"NA","intron (NM_033371, intron 1 of 10)","CpG",152,"NM_033371",73062,"Mm.322901","NM_033371","ENSMUSG00000033819","Ppp1r16a","2900084E10Rik|Mypt3|R75527","protein phosphatase 1, regulatory (inhibitor) subunit 16A","protein-coding"]
[395,"chr11",21091027,21092037,"+",0,"NA","5' UTR (NM_023324, exon 1 of 7)","5' UTR (NM_023324, exon 1 of 7)",208,"NM_023324",67245,"Mm.28957","NM_023324","ENSMUSG00000020134","Peli1","2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e","pellino 1","protein-coding"]
[89,"chr1",92906795,92907462,"+",0,"NA","exon (NM_175118, exon 1 of 2)","exon (NM_175118, exon 1 of 2)",139,"NM_175118",67446,"Mm.46179","NM_175118","ENSMUSG00000047067","Dusp28","0710001B24Rik|AV005521","dual specificity phosphatase 28","protein-coding"]
[175,"chr1",191574853,191576180,"+",0,"NA","promoter-TSS (NM_001306204)","promoter-TSS (NM_001306204)",28,"NM_001305233",76843,"Mm.189102","NM_029766","ENSMUSG00000037474","Dtl","2810047L02Rik|5730564G15Rik|Ramp","denticleless homolog (Drosophila)","protein-coding"]
[584,"chr11",94327832,94328607,"+",0,"NA","5' UTR (NM_146024, exon 1 of 5)","5' UTR (NM_146024, exon 1 of 5)",218,"NM_146024",71452,"Mm.141054","NM_027799","ENSMUSG00000020864","Ankrd40","1110011C06Rik|5530600A18Rik|Gcap15","ankyrin repeat domain 40","protein-coding"]
[3307,"chr8",124895752,124898612,"+",0,"NA","promoter-TSS (NM_001111141)","promoter-TSS (NM_001111141)",523,"NM_198103",102058,"Mm.347360","NM_198103","ENSMUSG00000074030","Exoc8","AI414418|EXO84|Exo84p|R74783|SEC84","exocyst complex component 8","protein-coding"]
[988,"chr14",29967999,29968843,"+",0,"NA","promoter-TSS (NM_019979)","promoter-TSS (NM_019979)",41,"NM_019979",80795,"Mm.104491","NM_019979","ENSMUSG00000042682","Selk","1110001C03Rik|AA673253|HSPC030|Hsp30","selenoprotein K","protein-coding"]
[35,"chr1",57377519,57378239,"+",0,"NA","promoter-TSS (NR_037999)","promoter-TSS (NR_037999)",259,"NM_028546",73467,"Mm.263673","NM_028546","ENSMUSG00000038323","1700066M21Rik","AI428479","RIKEN cDNA 1700066M21 gene","protein-coding"]
[2453,"chr4",155694046,155694914,"+",0,"NA","5' UTR (NM_178699, exon 1 of 1)","5' UTR (NM_178699, exon 1 of 1)",138,"NM_178699",230991,"Mm.29083","NM_178699","ENSMUSG00000074738","B930041F14Rik","MNCb-3966","RIKEN cDNA B930041F14 gene","protein-coding"]
[2295,"chr4",88094406,88095221,"+",0,"NA","intron (NM_001081184, intron 1 of 43)","CpG",183,"NM_001081184",230393,"Mm.287210","NM_001081184","ENSMUSG00000038368","Focad","Kiaa1797|mKIAA1797","focadhesin","protein-coding"]
[1882,"chr2",52857697,52859030,"+",0,"NA","intron (NM_172409, intron 1 of 26)","CpG",495,"NM_172409",71409,"Mm.394427","NM_172409","ENSMUSG00000036053","Fmnl2","5430425K04Rik|Man","formin-like 2","protein-coding"]
[1550,"chr18",32162887,32163543,"+",0,"NA","5' UTR (NM_011946, exon 1 of 17)","5' UTR (NM_011946, exon 1 of 17)",126,"NM_011946",26405,"Mm.211762","NM_011946","ENSMUSG00000024383","Map3k2","9630061B06Rik|AI585793|Mekk2|Mekk2b","mitogen-activated protein kinase kinase kinase 2","protein-coding"]
[1454,"chr17",35236170,35236854,"+",0,"NA","promoter-TSS (NM_023179)","promoter-TSS (NM_023179)",-84,"NM_023179",66237,"Mm.396107","NM_023179","ENSMUSG00000024403","Atp6v1g2","1500002D01Rik|Atp6g2|NG38|VAG2","ATPase, H+ transporting, lysosomal V1 subunit G2","protein-coding"]
[1421,"chr17",28858276,28859156,"+",0,"NA","5' UTR (NM_001034885, exon 1 of 10)","5' UTR (NM_001034885, exon 1 of 10)",305,"NM_001034885",433091,"Mm.328925","NM_001034885","ENSMUSG00000043286","Pnpla1","-","patatin-like phospholipase domain containing 1","protein-coding"]
[2827,"chr6",114397626,114398426,"+",0,"NA","promoter-TSS (NM_008285)","promoter-TSS (NM_008285)",90,"NM_008285",15465,"Mm.333327","NM_008285","ENSMUSG00000053004","Hrh1","Bphs|H1R|HH1R|Hir","histamine receptor H1","protein-coding"]
[665,"chr11",115603346,115605033,"+",0,"NA","promoter-TSS (NM_001252067)","promoter-TSS (NM_001252067)",38,"NM_025305",50529,"Mm.193040","NM_025305",null,"Mrps7","MRP-S7|Rpms7","mitchondrial ribosomal protein S7","protein-coding"]
[3021,"chr7",114415018,114416665,"+",0,"NA","promoter-TSS (NR_029437)","promoter-TSS (NR_029437)",587,"NM_011055",18576,"Mm.430730","NM_011055",null,"Pde3b","9830102A01Rik|AI847709","phosphodiesterase 3B, cGMP-inhibited","protein-coding"]
[2758,"chr6",52229578,52230240,"+",0,"NA","TTS (NR_029912)","TTS (NR_029912)",256,"NR_029912",723820,null,"NR_029912","ENSMUSG00000065443","Mir196b","Mirn196b|mir-196b","microRNA 196b","ncRNA"]
[1476,"chr17",47610818,47611819,"+",0,"NA","promoter-TSS (NM_020048)","promoter-TSS (NM_020048)",174,"NM_016859",53414,"Mm.472101","NM_016859","ENSMUSG00000023988","Bysl","Bys|Enp1","bystin-like","protein-coding"]
[2533,"chr5",63812138,63812717,"+",0,"NA","promoter-TSS (NM_029554)","promoter-TSS (NM_029554)",-68,"NM_029554",76261,"Mm.38143","NM_029554","ENSMUSG00000060512","0610040J01Rik","AI662686","RIKEN cDNA 0610040J01 gene","protein-coding"]
[1207,"chr15",98108292,98108957,"+",0,"NA","intron (NM_001163487, intron 1 of 22)","intron (NM_001163487, intron 1 of 22)",153,"NM_001163487",18642,"Mm.272582","NM_021514","ENSMUSG00000033065","Pfkm","AI131669|ATP-PFK|PFK-A|PFK-M|Pfk-4|Pfk4|Pfka|Pfkx","phosphofructokinase, muscle","protein-coding"]
[2641,"chr5",124439737,124440435,"+",0,"NA","intron (NM_001310725, intron 1 of 6)","CpG",156,"NM_001310725",67956,"Mm.137966","NM_030241","ENSMUSG00000049327","Setd8","2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07","SET domain containing (lysine methyltransferase) 8","protein-coding"]
[2670,"chr5",136217946,136219372,"+",0,"NA","3' UTR (NM_018825, exon 9 of 9)","3' UTR (NM_018825, exon 9 of 9)",-19705,"NM_025774",66801,"Mm.425295","NM_025774",null,"Prkrip1","8430424D23Rik|C114","Prkr interacting protein 1 (IL11 inducible)","protein-coding"]
[3007,"chr7",107209232,107210431,"+",0,"NA","exon (NM_029660, exon 1 of 1)","exon (NM_029660, exon 1 of 1)",386,"NM_029660",76572,"Mm.128134","NM_029660","ENSMUSG00000073894","Rbmxl2","1700012H05Rik|Hnrnpg-t","RNA binding motif protein, X-linked-like 2","protein-coding"]
[1584,"chr18",60911546,60912707,"+",0,"NA","promoter-TSS (NM_001038499)","promoter-TSS (NM_001038499)",-114,"NM_001038499",545260,"Mm.20147","NM_001038499",null,"Arsi","BC020108","arylsulfatase i","protein-coding"]
[904,"chr13",55477085,55477805,"+",0,"NA","TTS (NR_105909)","TTS (NR_105909)",331,"NR_105909",102465569,null,"NR_105909","ENSMUSG00000098341","Mir6944","Gm27710|mmu-mir-6944","microRNA 6944","ncRNA"]
[930,"chr13",75707053,75708775,"+",0,"NA","intron (NM_138953, intron 1 of 11)","CpG",430,"NM_138953",192657,"Mm.21288","NM_138953","ENSMUSG00000001542","Ell2","-","elongation factor RNA polymerase II 2","protein-coding"]
[1675,"chr19",7421706,7422815,"+",0,"NA","promoter-TSS (NR_105957)","promoter-TSS (NR_105957)",-313,"NR_105957",102466781,null,"NR_105957","ENSMUSG00000098293","Mir6991","Gm27966|mmu-mir-6991","microRNA 6991","ncRNA"]
[649,"chr11",107547912,107548667,"+",0,"NA","intron (NM_198298, intron 1 of 31)","CpG-2765",329,"NM_198298",78455,"Mm.272047","NM_198298","ENSMUSG00000020721","Helz","3110078M01Rik|9430093I07Rik|9630002H22Rik|AI851979|DRHC","helicase with zinc finger domain","protein-coding"]
[2972,"chr7",80993660,80994518,"+",0,"NA","intron (NM_178707, intron 1 of 9)","CpG",405,"NM_178707",233410,"Mm.29525","NM_178707","ENSMUSG00000005621","Zfp592","8430405N24|A730014M16Rik|Znf592|mKIAA0211","zinc finger protein 592","protein-coding"]
[2150,"chr3",89830785,89832094,"+",0,"NA","promoter-TSS (NM_172530)","promoter-TSS (NM_172530)",69,"NM_172530",214547,"Mm.225","NM_172530","ENSMUSG00000046280","She","9430022A14","src homology 2 domain-containing transforming protein E","protein-coding"]
[1318,"chr16",38902071,38902807,"+",0,"NA","promoter-TSS (NM_170599)","promoter-TSS (NM_170599)",94,"NM_170599",207683,"Mm.245564","NM_170599","ENSMUSG00000022790","Igsf11","1700025L02Rik|BT-IgSF|Igsf13","immunoglobulin superfamily, member 11","protein-coding"]
[648,"chr11",107479344,107479907,"+",0,"NA","promoter-TSS (NM_025894)","promoter-TSS (NM_025894)",97,"NM_025894",66997,"Mm.491171","NM_025894","ENSMUSG00000020720","Psmd12","1500002F15Rik|AI480719|P55","proteasome (prosome, macropain) 26S subunit, non-ATPase, 12","protein-coding"]
[642,"chr11",106036766,106037530,"+",0,"NA","exon (NM_027946, exon 1 of 7)","exon (NM_027946, exon 1 of 7)",276,"NM_027946",71833,"Mm.307455","NM_027946","ENSMUSG00000049354","Dcaf7","1700012F10Rik|2610037L01Rik|C86529|HAN11|Wdr68","DDB1 and CUL4 associated factor 7","protein-coding"]
[2006,"chr2",155381559,155382403,"+",0,"NA","5' UTR (NM_178111, exon 1 of 4)","5' UTR (NM_178111, exon 1 of 4)",125,"NM_178111",68728,"Mm.293605","NM_178111","ENSMUSG00000038375","Trp53inp2","1110029F20Rik|Tp53inp2","transformation related protein 53 inducible nuclear protein 2","protein-coding"]
[2245,"chr4",33030889,33032002,"+",0,"NA","promoter-TSS (NM_019586)","promoter-TSS (NM_019586)",20,"NM_019586",56228,"Mm.259095","NM_019586","ENSMUSG00000028277","Ube2j1","0710008M05Rik|1110030I22Rik|NCUBE-1|Ncube|Ncube1|Ubc6p","ubiquitin-conjugating enzyme E2J 1","protein-coding"]
[3178,"chr8",72723065,72724036,"+",0,"NA","intron (NM_009188, intron 1 of 18)","CpG",280,"NM_009188",20467,"Mm.2137","NM_009188","ENSMUSG00000031622","Sin3b","2810430C10Rik","transcriptional regulator, SIN3B (yeast)","protein-coding"]
[1764,"chr19",57360938,57361878,"+",0,"NA","promoter-TSS (NR_040316)","promoter-TSS (NR_040316)",399,"NM_145505",226252,"Mm.358870","NM_145505","ENSMUSG00000033478","Fam160b1","AI450540|mKIAA1600","family with sequence similarity 160, member B1","protein-coding"]
[3348,"chr9",44107146,44108226,"+",0,"NA","5' UTR (NM_001190313, exon 13 of 14)","5' UTR (NM_001190313, exon 13 of 14)",377,"NM_001190319",235312,"Mm.227110","NM_145613","ENSMUSG00000079592","C1qtnf5","Ctrp5","C1q and tumor necrosis factor related protein 5","protein-coding"]
[2130,"chr3",83765754,83767103,"+",0,"NA","5' UTR (NM_009144, exon 1 of 3)","5' UTR (NM_009144, exon 1 of 3)",107,"NM_009144",20319,"Mm.19155","NM_009144","ENSMUSG00000027996","Sfrp2","AI851596|Sdf5","secreted frizzled-related protein 2","protein-coding"]
[1908,"chr2",76675005,76675872,"+",0,"NA","5' UTR (NM_031256, exon 1 of 8)","5' UTR (NM_031256, exon 1 of 8)",123,"NM_031256",83435,"Mm.41636","NM_031256","ENSMUSG00000002733","Plekha3","FAPP1","pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3","protein-coding"]
[1028,"chr14",55511081,55512179,"+",0,"NA","intron (NM_009947, intron 1 of 16)","intron (NM_009947, intron 1 of 16)",270,"NM_009947",12891,"Mm.5249","NM_009947","ENSMUSG00000022212","Cpne6","AU067659|BB076446","copine VI","protein-coding"]
[1589,"chr18",62548261,62549016,"+",0,"NA","promoter-TSS (NM_177829)","promoter-TSS (NM_177829)",105,"NM_134136",107035,"Mm.21295","NM_134136","ENSMUSG00000042211","Fbxo38","6030410I24Rik|AU044865|AW214031|Moka|SP329","F-box protein 38","protein-coding"]
[198,"chr10",19591674,19592427,"+",0,"NA","promoter-TSS (NM_010511)","promoter-TSS (NM_010511)",92,"NM_010511",15979,"Mm.549","NM_010511","ENSMUSG00000020009","Ifngr1","CD119|IFN-gammaR|Ifgr|Ifngr|Nktar","interferon gamma receptor 1","protein-coding"]
[2792,"chr6",86849116,86850013,"+",0,"NA","promoter-TSS (NR_028298)","promoter-TSS (NR_028298)",47,"NM_001040106",269774,"Mm.221038","NM_177762","ENSMUSG00000057230","Aak1","5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048","AP2 associated kinase 1","protein-coding"]
[2550,"chr5",76183607,76184694,"+",0,"NA","exon (NM_011626, exon 1 of 6)","exon (NM_011626, exon 1 of 6)",270,"NM_011626",21982,"Mm.790","NM_011626","ENSMUSG00000029234","Tmem165","AV026557|Tpardl|Tparl|pFT27","transmembrane protein 165","protein-coding"]
[1718,"chr19",32757492,32758465,"+",0,"NA","5' UTR (NM_008960, exon 1 of 9)","5' UTR (NM_008960, exon 1 of 9)",401,"NM_008960",19211,"Mm.245395","NM_008960","ENSMUSG00000013663","Pten","2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|TEP1","phosphatase and tensin homolog","protein-coding"]
[1098,"chr15",35295866,35296523,"+",0,"NA","promoter-TSS (NM_054049)","promoter-TSS (NM_054049)",82,"NM_054049",107587,"Mm.46336","NM_054049","ENSMUSG00000022330","Osr2","5430409I15Rik|Osr2A|Osr2B","odd-skipped related 2","protein-coding"]
[1059,"chr14",76414527,76415688,"+",0,"NA","promoter-TSS (NM_207652)","promoter-TSS (NM_207652)",146,"NM_001310646",21807,"Mm.153272","NM_009366","ENSMUSG00000022010","Tsc22d1","AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22","TSC22 domain family, member 1","protein-coding"]
[2683,"chr5",138263437,138264083,"+",0,"NA","promoter-TSS (NR_045821)","promoter-TSS (NR_045821)",-285,"NR_045821",69004,"Mm.439868","NR_045821","ENSMUSG00000085227","6330418K02Rik","-","RIKEN cDNA 6330418K02 gene","ncRNA"]
[3003,"chr7",101663593,101664125,"+",0,"NA","promoter-TSS (NM_009191)","promoter-TSS (NM_009191)",91,"NM_009191",20480,"Mm.3990","NM_009191","ENSMUSG00000001829","Clpb","AL118244|Skd3","ClpB caseinolytic peptidase B","protein-coding"]
[3349,"chr9",44134575,44135724,"+",0,"NA","intron (NM_023061, intron 1 of 15)","CpG",491,"NM_023061",84004,"Mm.275003","NM_023061","ENSMUSG00000032135","Mcam","1-gicerin|AV025631|CD146|CD149|Muc18|s-endo|s-gicerin","melanoma cell adhesion molecule","protein-coding"]
[913,"chr13",58402162,58402984,"+",0,"NA","promoter-TSS (NM_025279)","promoter-TSS (NM_025279)",-24,"NM_028904",74386,"Mm.85289","NM_028904","ENSMUSG00000035367","Rmi1","4932432N11Rik|C79893","RMI1, RecQ mediated genome instability 1","protein-coding"]
[2019,"chr2",157278865,157279719,"+",0,"NA","exon (NM_001039557, exon 1 of 25)","exon (NM_001039557, exon 1 of 25)",194,"NM_019642",20014,"Mm.22130","NM_019642","ENSMUSG00000027642","Rpn2","1300012C06Rik|AV261018|Rpn-2","ribophorin II","protein-coding"]
[2665,"chr5",135187323,135188075,"+",0,"NA","exon (NM_011714, exon 1 of 19)","exon (NM_011714, exon 1 of 19)",376,"NM_011714",22385,"Mm.40331","NM_011714","ENSMUSG00000002748","Baz1b","C87820|WSTF|Wbscr9","bromodomain adjacent to zinc finger domain, 1B","protein-coding"]
[202,"chr10",24869746,24870343,"+",0,"NA","promoter-TSS (NM_027347)","promoter-TSS (NM_027347)",58,"NM_027347",70208,"Mm.28020","NM_027347","ENSMUSG00000019984","Med23","130kDa|3000002A17Rik|Crsp3|ESTM7|Sur2|X83317|mKIAA1216","mediator complex subunit 23","protein-coding"]
[361,"chr10",127165714,127166353,"+",0,"NA","exon (NM_008080, exon 2 of 11)","exon (NM_008080, exon 2 of 11)",202,"NM_001244618",14421,"Mm.386762","NM_008080","ENSMUSG00000006731","B4galnt1","4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2","beta-1,4-N-acetyl-galactosaminyl transferase 1","protein-coding"]
[2468,"chr5",9100286,9101592,"+",0,"NA","intron (NM_001081029, intron 1 of 4)","CpG",202,"NM_001081029",652925,"Mm.439954","NM_001081029","ENSMUSG00000079659","Tmem243","4930420K17Rik|E030031F02Rik","transmembrane protein 243, mitochondrial","protein-coding"]
[184,"chr10",3972887,3974012,"+",0,"NA","exon (NM_001170786, exon 1 of 28)","exon (NM_001170786, exon 1 of 28)",374,"NM_172308",270685,"Mm.184752","NM_172308","ENSMUSG00000040675","Mthfd1l","2410004L15Rik|AI647056|Fthfsdc1","methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like","protein-coding"]
[3282,"chr8",120668219,120668856,"+",0,"NA","promoter-TSS (NM_010926)","promoter-TSS (NM_010926)",217,"NM_001293559",12857,"Mm.386758","NM_009941","ENSMUSG00000031818","Cox4i1","AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1","cytochrome c oxidase subunit IV isoform 1","protein-coding"]
[776,"chr12",82616609,82617862,"+",0,"NA","promoter-TSS (NM_001282061)","promoter-TSS (NM_001282061)",-264,"NM_001282061",50779,"Mm.126176","NM_015812","ENSMUSG00000021219","Rgs6","-","regulator of G-protein signaling 6","protein-coding"]
[2183,"chr3",109123117,109123569,"+",0,"NA","exon (NM_172685, exon 1 of 10)","exon (NM_172685, exon 1 of 10)",194,"NM_172685",229731,"Mm.33574","NM_172685","ENSMUSG00000040322","Slc25a24","2610016M12Rik","solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24","protein-coding"]
[1819,"chr2",28192649,28193674,"+",0,"NA","promoter-TSS (NM_001038614)","promoter-TSS (NM_001038614)",68,"NM_001038614",56177,"Mm.43278","NM_019498","ENSMUSG00000026833","Olfm1","AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3","olfactomedin 1","protein-coding"]
[1459,"chr17",35865398,35866227,"+",0,"NA","promoter-TSS (NM_175242)","promoter-TSS (NM_175242)",217,"NM_001146711",76448,"Mm.359982","NM_175242","ENSMUSG00000034595","Ppp1r18","2310014H01Rik|AA407849|AI450394","protein phosphatase 1, regulatory subunit 18","protein-coding"]
[1570,"chr18",38296433,38297199,"+",0,"NA","promoter-TSS (NM_001164621)","promoter-TSS (NM_001164621)",11,"NM_001164621",56736,"Mm.228903","NM_020012","ENSMUSG00000060450","Rnf14","2310075C09Rik|2610005D23Rik|AA986456|AU041447|D18Ertd188e|D7Bwg0165e|Triad2","ring finger protein 14","protein-coding"]
[2673,"chr5",137294294,137295243,"+",0,"NA","promoter-TSS (NM_027356)","promoter-TSS (NM_027356)",99,"NM_027356",70240,"Mm.124666","NM_027356","ENSMUSG00000051502","Ufsp1","2700038N03Rik|D5Ertd655e","UFM1-specific peptidase 1","protein-coding"]
[1984,"chr2",133551916,133553258,"+",0,"NA","5' UTR (NM_007553, exon 1 of 3)","5' UTR (NM_007553, exon 1 of 3)",428,"NM_007553",12156,"Mm.103205","NM_007553","ENSMUSG00000027358","Bmp2","AI467020|Bmp2a","bone morphogenetic protein 2","protein-coding"]
[1269,"chr16",17646328,17647046,"+",0,"NA","exon (NM_001166164, exon 1 of 8)","exon (NM_001166164, exon 1 of 8)",217,"NM_001166164",72315,"Mm.297777","NM_001166164","ENSMUSG00000041617","Ccdc74a","2310015A05Rik","coiled-coil domain containing 74A","protein-coding"]
[181,"chr1",192854604,192855618,"+",0,"NA","intron (NR_131748, intron 1 of 1)","CpG",183,"NR_131748",100503471,"Mm.380305","NR_131748",null,"Gm15867","OTTMUSG00000027054","predicted gene 15867","ncRNA"]
[412,"chr11",43681795,43682827,"+",0,"NA","exon (NM_001164231, exon 1 of 4)","exon (NM_001164231, exon 1 of 4)",313,"NM_001164231",70802,"Mm.397449","NM_027557","ENSMUSG00000044950","Pwwp2a","4631424J17Rik|AI891583|AU024105|D930040F23Rik","PWWP domain containing 2A","protein-coding"]
[307,"chr10",81337203,81338527,"+",0,"NA","3' UTR (NM_148951, exon 6 of 6)","3' UTR (NM_148951, exon 6 of 6)",5401,"NM_148951",209047,"Mm.218755","NM_148951","ENSMUSG00000034872","Gipc3","Ahl5|Rgs19ip3","GIPC PDZ domain containing family, member 3","protein-coding"]
[3472,"chr9",108795895,108796474,"+",0,"NA","5' UTR (NM_029634, exon 1 of 6)","5' UTR (NM_029634, exon 1 of 6)",190,"NM_029634",76500,"Mm.276336","NM_029634","ENSMUSG00000032599","Ip6k2","1500005N04Rik|AW050208|Ihpk2","inositol hexaphosphate kinase 2","protein-coding"]
[1671,"chr19",7056283,7058236,"+",0,"NA","intron (NM_134147, intron 1 of 10)","intron (NM_134147, intron 1 of 10)",491,"NM_134147",107227,"Mm.439977","NM_134147","ENSMUSG00000036278","Macrod1","AI604841|AW743046|D930010J01Rik|Lrp16","MACRO domain containing 1","protein-coding"]
[2041,"chr2",164745668,164746481,"+",0,"NA","promoter-TSS (NM_133763)","promoter-TSS (NM_133763)",59,"NM_133763",76233,"Mm.440009","NM_133763","ENSMUSG00000017299","Dnttip1","6430706C13Rik","deoxynucleotidyltransferase, terminal, interacting protein 1","protein-coding"]
[1467,"chr17",45555608,45556384,"+",0,"NA","exon (NM_001304956, exon 1 of 6)","exon (NM_001304956, exon 1 of 6)",296,"NM_001304956",18037,"Mm.57043","NM_008690","ENSMUSG00000023947","Nfkbie","I-kappa-B-epsilon|IKBE|IkB-E|NF-kappa-BIE|ikB-epsilon","nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, epsilon","protein-coding"]
[1463,"chr17",36942715,36943478,"+",0,"NA","promoter-TSS (NM_001099632)","promoter-TSS (NM_001099632)",45,"NM_001099632",386454,"Mm.105324","NM_001099632","ENSMUSG00000036492","Rnf39","BC038661|Gm1786|Gm1787|Gm320|LIRF","ring finger protein 39","protein-coding"]
[830,"chr12",111537386,111539478,"+",0,"NA","5' UTR (NM_178041, exon 2 of 12)","5' UTR (NM_178041, exon 2 of 12)",331,"NM_173363",217869,"Mm.271222","NM_173363","ENSMUSG00000021282","Eif5","2810011H21Rik|D12Ertd549e","eukaryotic translation initiation factor 5","protein-coding"]
[154,"chr1",172376322,172377491,"+",0,"NA","exon (NM_026234, exon 1 of 1)","exon (NM_026234, exon 1 of 1)",375,"NM_026234",67556,"Mm.26612","NM_026234","ENSMUSG00000050229","Pigm","4933437L05Rik|AI644422|AV302080|C920011G20Rik","phosphatidylinositol glycan anchor biosynthesis, class M","protein-coding"]
[2893,"chr7",25316546,25317815,"+",0,"NA","promoter-TSS (NM_001160400)","promoter-TSS (NM_001160400)",16,"NM_001160400",269878,"Mm.38527","NM_001160400","ENSMUSG00000045039","Megf8","AW049492|Egfl4|b2b1702Clo|b2b288Clo|m687Ddg|mKIAA0817","multiple EGF-like-domains 8","protein-coding"]
[2062,"chr2",172550703,172551470,"+",0,"NA","promoter-TSS (NM_001159696)","promoter-TSS (NM_001159696)",95,"NM_001159696",21420,"Mm.3629","NM_009335","ENSMUSG00000028640","Tfap2c","AA409384|AP2gamma|Ap-2.2|Stra2|Tcfap2c","transcription factor AP-2, gamma","protein-coding"]
[1101,"chr15",37232724,37233440,"+",0,"NA","promoter-TSS (NM_026496)","promoter-TSS (NM_026496)",46,"NM_026496",252973,"Mm.244612","NM_026496","ENSMUSG00000022286","Grhl2","0610015A08Rik|BOM|Tcfcp2l3","grainyhead-like 2 (Drosophila)","protein-coding"]
[2801,"chr6",89643781,89644312,"+",0,"NA","promoter-TSS (NM_001178058)","promoter-TSS (NM_001178058)",58,"NM_001178058",232223,"Mm.229332","NM_153162","ENSMUSG00000000811","Txnrd3","AI196535|TR2|Tgr","thioredoxin reductase 3","protein-coding"]
[704,"chr11",120712707,120714055,"+",0,"NA","promoter-TSS (NM_153545)","promoter-TSS (NM_153545)",386,"NM_016665",20892,"Mm.259716","NM_016665","ENSMUSG00000025144","Stra13","-","stimulated by retinoic acid 13","protein-coding"]
[326,"chr10",93160834,93161634,"+",0,"NA","intron (NM_146239, intron 1 of 16)","CpG",358,"NM_146239",237459,"Mm.217404","NM_146239","ENSMUSG00000020015","Cdk17","6430598J10Rik|Pctk2","cyclin-dependent kinase 17","protein-coding"]
[1462,"chr17",36836838,36837580,"+",0,"NA","promoter-TSS (NM_001286726)","promoter-TSS (NM_001286726)",63,"NM_001286726",22670,"Mm.34587","NM_030698","ENSMUSG00000024457","Trim26","AI462198|Zfp173|Zfp1736","tripartite motif-containing 26","protein-coding"]
[1165,"chr15",79658547,79659509,"+",0,"NA","promoter-TSS (NM_028634)","promoter-TSS (NM_028634)",-72,"NM_029407",75729,"Mm.78946","NM_029407","ENSMUSG00000042564","Fam227a","4933432B09Rik","family with sequence similarity 227, member A","protein-coding"]
[2886,"chr7",24587326,24587789,"+",0,"NA","promoter-TSS (NM_001033205)","promoter-TSS (NM_001033205)",14,"NM_023154",66071,"Mm.29553","NM_023154","ENSMUSG00000064254","Ethe1","0610025L15Rik|Hsco","ethylmalonic encephalopathy 1","protein-coding"]
[2543,"chr5",72913810,72915159,"+",0,"NA","5' UTR (NM_001113423, exon 1 of 8)","5' UTR (NM_001113423, exon 1 of 8)",122,"NM_153567",75991,"Mm.121285","NM_153567","ENSMUSG00000036087","Slain2","5033405K12Rik|8030444K12Rik|AI596370","SLAIN motif family, member 2","protein-coding"]
[681,"chr11",117809517,117811038,"+",0,"NA","intron (NM_009304, intron 1 of 3)","intron (NM_009304, intron 1 of 3)",610,"NM_009304",20973,"Mm.468228","NM_009304","ENSMUSG00000048277","Syngr2","Clast2|cellugyrin","synaptogyrin 2","protein-coding"]
[335,"chr10",98914616,98915989,"+",0,"NA","5' UTR (NM_026482, exon 1 of 21)","5' UTR (NM_026482, exon 1 of 21)",150,"NM_026482",67972,"Mm.166944","NM_026482","ENSMUSG00000019943","Atp2b1","2810442I22Rik|E130111D10Rik|Pmca1","ATPase, Ca++ transporting, plasma membrane 1","protein-coding"]
[3062,"chr7",133637173,133637902,"+",0,"NA","promoter-TSS (NM_178115)","promoter-TSS (NM_178115)",-138,"NM_178115",214764,"Mm.174044","NM_145995","ENSMUSG00000039990","Edrf1","2700050L05Rik|AU022667|AW558805","erythroid differentiation regulatory factor 1","protein-coding"]
[1029,"chr14",55540134,55540740,"+",0,"NA","exon (NM_028994, exon 1 of 10)","exon (NM_028994, exon 1 of 10)",171,"NM_028994",74551,"Mm.29856","NM_028994","ENSMUSG00000040618","Pck2","1810010O14Rik|9130022B02Rik|PEPCK-M","phosphoenolpyruvate carboxykinase 2 (mitochondrial)","protein-coding"]
[2715,"chr5",146844847,146845535,"+",0,"NA","5' UTR (NM_026864, exon 1 of 4)","5' UTR (NM_026864, exon 1 of 4)",120,"NM_026864",68895,"Mm.266978","NM_026864","ENSMUSG00000029641","Rasl11a","1110065D03Rik|AI852031","RAS-like, family 11, member A","protein-coding"]
[5,"chr1",9545122,9545792,"+",0,"NA","promoter-TSS (NM_021511)","promoter-TSS (NM_021511)",49,"NM_021511",59014,"Mm.29061","NM_021511","ENSMUSG00000061024","Rrs1","5730466A07Rik|AA415037|D1Ertd701e|Rrr","RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)","protein-coding"]
[3292,"chr8",122481651,122482587,"+",0,"NA","exon (NM_001037298, exon 51 of 51)","exon (NM_001037298, exon 51 of 51)",5976,"NM_153775",66965,"Mm.482288","NM_153775","ENSMUSG00000049482","Ctu2","2310061F22Rik|C16orf84|Ncs2","cytosolic thiouridylase subunit 2 homolog (S. pombe)","protein-coding"]
[2694,"chr5",140331632,140332385,"+",0,"NA","promoter-TSS (NM_008637)","promoter-TSS (NM_008637)",86,"NM_008637",17766,"Mm.118846","NM_008637","ENSMUSG00000036639","Nudt1","Mth1","nudix (nucleoside diphosphate linked moiety X)-type motif 1","protein-coding"]
[2105,"chr3",51224334,51225534,"+",0,"NA","5' UTR (NM_009834, exon 1 of 3)","5' UTR (NM_009834, exon 1 of 3)",487,"NM_009834",12457,"Mm.86541","NM_009834","ENSMUSG00000023087","Noct","AU043840|Ccr4|Ccrn4l","nocturnin","protein-coding"]
[3455,"chr9",107533754,107535256,"+",0,"NA","exon (NM_019704, exon 1 of 2)","exon (NM_019704, exon 1 of 2)",560,"NM_019704",56395,"Mm.260153","NM_019704","ENSMUSG00000010045","Tmem115","C78915|Pl6|Pp6","transmembrane protein 115","protein-coding"]
[2791,"chr6",86526089,86527404,"+",0,"NA","promoter-TSS (NM_011865)","promoter-TSS (NM_011865)",-581,"NM_011865",23983,"Mm.274146","NM_011865","ENSMUSG00000051695","Pcbp1","WBP17|[a]CP-1|alphaCP-1","poly(rC) binding protein 1","protein-coding"]
[1957,"chr2",124610240,124610810,"+",0,"NA","5' UTR (NM_199238, exon 1 of 17)","5' UTR (NM_199238, exon 1 of 17)",229,"NM_172537",214968,"Mm.330536","NM_172537","ENSMUSG00000027200","Sema6d","1110067B02Rik|AA409156|D330011G23|mKIAA1479","sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D","protein-coding"]
[554,"chr11",82764011,82764743,"+",0,"NA","promoter-TSS (NM_025884)","promoter-TSS (NM_025884)",32,"NM_025884",66983,"Mm.29622","NM_025884",null,"Zfp830","2410003C20Rik|AV301118|AW048207|Ccdc16|Omcg1|Znf830","zinc finger protein 830","protein-coding"]
[2657,"chr5",130144544,130145414,"+",0,"NA","promoter-TSS (NM_172509)","promoter-TSS (NM_172509)",91,"NM_172509",212919,"Mm.55812","NM_172509","ENSMUSG00000034110","Kctd7","4932409E18|9430010P06Rik","potassium channel tetramerisation domain containing 7","protein-coding"]
[552,"chr11",80383123,80383870,"+",0,"NA","intron (NR_045038, intron 1 of 16)","intron (NR_045038, intron 1 of 16)",217,"NM_001130171",22680,"Mm.401332","NM_011751","ENSMUSG00000017421","Zfp207","8430401D15Rik|BuGZ|Zep|Znf207","zinc finger protein 207","protein-coding"]
[1867,"chr2",35558005,35558825,"+",0,"NA","promoter-TSS (NM_001114125)","promoter-TSS (NM_001114125)",-43,"NM_001114125",69601,"Mm.29629","NM_001001602","ENSMUSG00000026883","Dab2ip","2310011D08Rik|AI480459|Aip1|mKIAA1743","disabled 2 interacting protein","protein-coding"]
[1623,"chr19",3707801,3708678,"+",0,"NA","promoter-TSS (NM_028077)","promoter-TSS (NM_028077)",-94,"NM_028077",72056,"Mm.23780","NM_028077","ENSMUSG00000035372","1810055G02Rik","AI256204","RIKEN cDNA 1810055G02 gene","protein-coding"]
[2505,"chr5",33377847,33379165,"+",0,"NA","promoter-TSS (NM_001081101)","promoter-TSS (NM_001081101)",-190,"NM_001081101",71101,"Mm.132178","NM_001081101","ENSMUSG00000037355","Uvssa","4933407H18Rik|D330017J19Rik|Kiaa1530|mKIAA1530","UV stimulated scaffold protein A","protein-coding"]
[74,"chr1",87213694,87214619,"+",0,"NA","5' UTR (NM_001039169, exon 1 of 7)","5' UTR (NM_001039169, exon 1 of 7)",217,"NM_001039169",26987,"Mm.227183","NM_023314","ENSMUSG00000026254","Eif4e2","2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3","eukaryotic translation initiation factor 4E member 2","protein-coding"]
[2936,"chr7",46033520,46034152,"+",0,"NA","exon (NM_153057, exon 1 of 31)","exon (NM_153057, exon 1 of 31)",140,"NM_153057",211548,"Mm.274811","NM_153057","ENSMUSG00000030835","Nomo1","D7Ertd156e|Nomo|pM5","nodal modulator 1","protein-coding"]
[890,"chr13",49420796,49421987,"+",0,"NA","promoter-TSS (NM_001276399)","promoter-TSS (NM_001276399)",168,"NM_199056",75678,"Mm.390586","NM_199056","ENSMUSG00000021385","Ippk","1810043M15Rik|InsP6","inositol 1,3,4,5,6-pentakisphosphate 2-kinase","protein-coding"]
[440,"chr11",54522645,54523340,"+",0,"NA","5' UTR (NM_175258, exon 1 of 28)","5' UTR (NM_175258, exon 1 of 28)",147,"NM_001252496",192786,"Mm.254404","NM_175258","ENSMUSG00000037533","Rapgef6","A530068K01|AI844632|BB085664|C030018K18Rik|PDZ-GEF2|Pdzgef2|RA-GEF-2|Ragef2|mKIAA4052","Rap guanine nucleotide exchange factor (GEF) 6","protein-coding"]
[1926,"chr2",92387128,92387936,"+",0,"NA","promoter-TSS (NR_105966)","promoter-TSS (NR_105966)",-86,"NR_105966",102466783,null,"NR_105966","ENSMUSG00000099093","Mir7000","Gm27338|mmu-mir-7000","microRNA 7000","ncRNA"]
[1289,"chr16",22009153,22010106,"+",0,"NA","non-coding (NR_027488, exon 1 of 17)","non-coding (NR_027488, exon 1 of 17)",145,"NR_027488",75826,"Mm.297431","NM_029457","ENSMUSG00000022855","Senp2","2310007L05Rik|4930538C18Rik|AI646780|AW554757|Smt3ip2|SuPr-1|mKIAA1331","SUMO/sentrin specific peptidase 2","protein-coding"]
[299,"chr10",80879264,80880240,"+",0,"NA","promoter-TSS (NM_001081688)","promoter-TSS (NM_001081688)",-64,"NM_001081688",432478,"Mm.235302","NM_001081688","ENSMUSG00000059406","Tmprss9","Serase-1B","transmembrane protease, serine 9","protein-coding"]
[2024,"chr2",158409584,158410643,"+",0,"NA","intron (NM_001291137, intron 1 of 30)","CpG",260,"NM_001291138",228850,"Mm.398185","NM_177227","ENSMUSG00000027652","Ralgapb","9330195P16|AI507211|B230339M05Rik|mKIAA1219|p170","Ral GTPase activating protein, beta subunit (non-catalytic)","protein-coding"]
[2525,"chr5",43233173,43234342,"+",0,"NA","exon (NM_001177379, exon 1 of 11)","exon (NM_001177379, exon 1 of 11)",294,"NM_001177379",231207,"Mm.7233","NM_175937","ENSMUSG00000039782","Cpeb2","A630055H10Rik|Cpe-bp2","cytoplasmic polyadenylation element binding protein 2","protein-coding"]
[1282,"chr16",20097426,20098224,"+",0,"NA","intron (NM_029436, intron 1 of 7)","CpG",271,"NM_029436",75785,"Mm.392450","NM_029436","ENSMUSG00000062901","Klhl24","1110046J11Rik|4930429H24Rik|6530402O20Rik|C85082","kelch-like 24","protein-coding"]
[1694,"chr19",16132778,16134029,"+",0,"NA","exon (NM_008139, exon 1 of 7)","exon (NM_008139, exon 1 of 7)",572,"NM_008139",14682,"Mm.439701","NM_008139","ENSMUSG00000024639","Gnaq","1110005L02Rik|6230401I02Rik|AA408290|AW060788|Dsk1|Dsk10|Galphaq|Gq|GqI","guanine nucleotide binding protein, alpha q polypeptide","protein-coding"]
[841,"chr12",112808733,112809632,"+",0,"NA","5' UTR (NM_145450, exon 1 of 5)","5' UTR (NM_145450, exon 1 of 5)",207,"NM_145450",217887,"Mm.186678","NM_145450","ENSMUSG00000037594","BC022687","AW050009|C130001I08Rik|Flj20080","cDNA sequence BC022687","protein-coding"]
[1898,"chr2",72285426,72286329,"+",0,"NA","intron (NM_178084, intron 1 of 9)","CpG",176,"NM_178084",65964,"Mm.304143","NM_023057","ENSMUSG00000004085","Zak","AV006891|B230120H23Rik|MLTK|MLTKalpha|MLTKbeta","sterile alpha motif and leucine zipper containing kinase AZK","protein-coding"]
[1044,"chr14",65358304,65359452,"+",0,"NA","intron (NM_199029, intron 1 of 9)","CpG",202,"NM_199029",380912,"Mm.270087","NM_199029","ENSMUSG00000034522","Zfp395","BC053701|Gm910","zinc finger protein 395","protein-coding"]
[3513,"chrX",7841523,7842552,"+",0,"NA","promoter-TSS (NM_001290537)","promoter-TSS (NM_001290537)",-45,"NM_001290537",54644,"Mm.142827","NM_138604","ENSMUSG00000031154","Otud5","AA407879|AI553596|BB114028|DUBA|DXImx46e|Sfc7","OTU domain containing 5","protein-coding"]
[1350,"chr17",3326437,3327182,"+",0,"NA","intron (NM_001122998, intron 1 of 26)","CpG",236,"NM_001122998",24001,"Mm.137134","NM_011878","ENSMUSG00000023800","Tiam2","3000002F19Rik|STEF|mKIAA2016","T cell lymphoma invasion and metastasis 2","protein-coding"]
[1751,"chr19",47178509,47179809,"+",0,"NA","5' UTR (NM_021360, exon 1 of 6)","5' UTR (NM_021360, exon 1 of 6)",339,"NM_021360",18011,"Mm.313651","NM_021360","ENSMUSG00000006435","Neurl1a","2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67","neuralized E3 ubiquitin protein ligase 1A","protein-coding"]
[91,"chr1",93235833,93236925,"+",0,"NA","intron (NM_172463, intron 1 of 30)","CpG",482,"NM_172463",208777,"Mm.271897","NM_172463","ENSMUSG00000047793","Sned1","6720455I24Rik|AI197264|AI642697|D430044C15Rik|SST3|Snep","sushi, nidogen and EGF-like domains 1","protein-coding"]
[2137,"chr3",88214845,88215505,"+",0,"NA","promoter-TSS (NR_029817)","promoter-TSS (NR_029817)",4,"NR_037276",100526540,null,"NR_037276","ENSMUSG00000092988","Mir3093","mir-3093|mmu-mir-3093","microRNA 3093","ncRNA"]
[3183,"chr8",79638743,79640176,"+",0,"NA","promoter-TSS (NM_001081164)","promoter-TSS (NM_001081164)",-217,"NM_001256033",73945,"Mm.34348","NM_001081164","ENSMUSG00000036990","Otud4","4930431L18Rik|AI449692|D8Ertd69e|mKIAA1046","OTU domain containing 4","protein-coding"]
[1240,"chr16",4963826,4964645,"+",0,"NA","promoter-TSS (NM_001271586)","promoter-TSS (NM_001271586)",2,"NM_028301",72615,"Mm.290628","NM_028301","ENSMUSG00000022515","Anks3","2700067D09Rik|C81345|mKIAA1977","ankyrin repeat and sterile alpha motif domain containing 3","protein-coding"]
[2815,"chr6",108782898,108783745,"+",0,"NA","exon (NM_026011, exon 1 of 7)","exon (NM_026011, exon 1 of 7)",262,"NM_026011",67166,"Mm.271178","NM_026011",null,"Arl8b","2610313E07Rik|3100002J04Rik|Arl10c|gie1","ADP-ribosylation factor-like 8B","protein-coding"]
[3079,"chr7",141192833,141194591,"+",0,"NA","promoter-TSS (NM_001172065)","promoter-TSS (NM_001172065)",292,"NM_001130444",15461,"Mm.334313","NM_008284","ENSMUSG00000025499","Hras","H-ras|Ha-ras|Harvey-ras|Hras-1|Hras1|Kras2|c-H-ras|c-Ha-ras|c-rasHa|ras","Harvey rat sarcoma virus oncogene","protein-coding"]
[467,"chr11",62076789,62077386,"+",0,"NA","promoter-TSS (NM_001029936)","promoter-TSS (NM_001029936)",63,"NM_001029936",432572,"Mm.438022","NM_001029936","ENSMUSG00000042331","Specc1","2810012G08Rik|B230396K10Rik|Cytsb","sperm antigen with calponin homology and coiled-coil domains 1","protein-coding"]
[2121,"chr3",63975983,63976777,"+",0,"NA","intron (NM_001033300, intron 1 of 15)","CpG",237,"NM_001033300",229363,"Mm.331051","NM_001033300","ENSMUSG00000027823","Gmps","AA591640|AI047208","guanine monophosphate synthetase","protein-coding"]
[474,"chr11",65806846,65807638,"+",0,"NA","promoter-TSS (NM_001302375)","promoter-TSS (NM_001302375)",67,"NM_001302375",52712,"Mm.340052","NM_026107","ENSMUSG00000018347","Zkscan6","1700128E15Rik|D11Ertd714e|KOX11|Zfp535|Znf18","zinc finger with KRAB and SCAN domains 6","protein-coding"]
[481,"chr11",69059162,69060395,"+",0,"NA","promoter-TSS (NM_028005)","promoter-TSS (NM_028005)",3,"NM_028005",71923,"Mm.340257","NM_028005","ENSMUSG00000045176","Borcs6","2310047M10Rik","BLOC-1 related complex subunit 6","protein-coding"]
[867,"chr13",31625626,31626432,"+",0,"NA","5' UTR (NM_010225, exon 1 of 2)","5' UTR (NM_010225, exon 1 of 2)",213,"NM_010225",14238,"Mm.125548","NM_010225","ENSMUSG00000038402","Foxf2","FREAC2|Fkh20|LUN","forkhead box F2","protein-coding"]
[3355,"chr9",44798940,44799941,"+",0,"NA","promoter-TSS (NM_027865)","promoter-TSS (NM_027865)",-224,"NM_027865",71687,"Mm.41409","NM_027865","ENSMUSG00000002032","Tmem25","0610039J01Rik|AI429491","transmembrane protein 25","protein-coding"]
[1976,"chr2",130449985,130450891,"+",0,"NA","5' UTR (NM_001163688, exon 1 of 21)","5' UTR (NM_001163688, exon 1 of 21)",160,"NM_001163688",19262,"Mm.224246","NM_008980","ENSMUSG00000027303","Ptpra","Ptpa|Ptpalpha|Rptpalpha|Rptra|Rptralpha","protein tyrosine phosphatase, receptor type, A","protein-coding"]
[3442,"chr9",102505857,102506554,"+",0,"NA","promoter-TSS (NM_024291)","promoter-TSS (NM_024291)",67,"NM_024291",16716,"Mm.101692","NM_024291","ENSMUSG00000035606","Ky","CD1|D9Mgc44e|ky","kyphoscoliosis peptidase","protein-coding"]
[817,"chr12",108370923,108371564,"+",0,"NA","promoter-TSS (NM_001286346)","promoter-TSS (NM_001286346)",90,"NM_001286346",68519,"Mm.236645","NM_001043335","ENSMUSG00000058070","Eml1","1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco","echinoderm microtubule associated protein like 1","protein-coding"]
[563,"chr11",84957578,84958393,"+",0,"NA","intron (NM_007607, intron 1 of 7)","CpG",231,"NM_007607",12351,"Mm.1641","NM_007607","ENSMUSG00000000805","Car4","AW456718|Ca4","carbonic anhydrase 4","protein-coding"]
[2751,"chr6",48395176,48396101,"+",0,"NA","promoter-TSS (NM_133922)","promoter-TSS (NM_133922)",52,"NM_133922",77827,"Mm.107646","NM_133922","ENSMUSG00000042810","Krba1","A930040G15Rik|AI448780","KRAB-A domain containing 1","protein-coding"]
[3470,"chr9",108578176,108579383,"+",0,"NA","promoter-TSS (NM_031392)","promoter-TSS (NM_031392)",-109,"NM_031392",83669,"Mm.335454","NM_031392","ENSMUSG00000066357","Wdr6","mWDR6","WD repeat domain 6","protein-coding"]
[3248,"chr8",106935524,106936587,"+",0,"NA","exon (NM_009229, exon 1 of 7)","exon (NM_009229, exon 1 of 7)",305,"NM_009229",20650,"Mm.30228","NM_009229","ENSMUSG00000041308","Sntb2","Snt2","syntrophin, basic 2","protein-coding"]
[2919,"chr7",44359866,44360588,"+",0,"NA","exon (NM_027049, exon 6 of 6)","exon (NM_027049, exon 6 of 6)",14803,"NM_027049",69349,"Mm.358922","NM_027049","ENSMUSG00000008028","1700008O03Rik","-","RIKEN cDNA 1700008O03 gene","protein-coding"]
[2953,"chr7",66079398,66080033,"+",0,"NA","promoter-TSS (NM_024439)","promoter-TSS (NM_024439)",66,"NM_024439",109815,"Mm.482127","NM_024439","ENSMUSG00000075701","Vimp","1500011E07Rik|C78786|H-4|H-47|H4|H47|Sels","VCP-interacting membrane protein","protein-coding"]
[229,"chr10",58812746,58813635,"+",0,"NA","promoter-TSS (NM_172788)","promoter-TSS (NM_172788)",-169,"NM_172788",237353,"Mm.333078","NM_172788","ENSMUSG00000037990","Sh3rf3","4831416G18Rik|Igfbp5-ip|Sh3md4|Sh3rf31","SH3 domain containing ring finger 3","protein-coding"]
[673,"chr11",116645573,116646479,"+",0,"NA","3' UTR (NM_030206, exon 4 of 4)","3' UTR (NM_030206, exon 4 of 4)",8287,"NM_030206",114886,"Mm.34598","NM_030206","ENSMUSG00000020810","Cygb","3110001K20Rik|HGb|Staap","cytoglobin","protein-coding"]
[3489,"chr9",118606476,118607698,"+",0,"NA","exon (NM_133721, exon 1 of 28)","exon (NM_133721, exon 1 of 28)",378,"NM_133721",104099,"Mm.335520","NM_133721","ENSMUSG00000039115","Itga9","(alpha)9|2610002H11Rik|6720458D17Rik|AI461869|D130073C02|D9Ertd428e","integrin alpha 9","protein-coding"]
[3322,"chr9",20642878,20643493,"+",0,"NA","promoter-TSS (NM_013911)","promoter-TSS (NM_013911)",-133,"NM_025401",66177,"Mm.390165","NM_025401","ENSMUSG00000084786","Ubl5","1110030M22Rik|beacon","ubiquitin-like 5","protein-coding"]
[68,"chr1",85793239,85794309,"+",0,"NA","5' UTR (NM_133781, exon 1 of 9)","5' UTR (NM_133781, exon 1 of 9)",327,"NM_133781",12283,"Mm.26135","NM_133781","ENSMUSG00000036707","Cab39","AA408805|AA960512|C78372|MO25|MO25alpha","calcium binding protein 39","protein-coding"]
[2059,"chr2",168229676,168231878,"+",0,"NA","promoter-TSS (NR_132310)","promoter-TSS (NR_132310)",155,"NM_001160330",69372,"Mm.482182","NM_001160330","ENSMUSG00000074576","Mocs3","1700020H17Rik|Uba4","molybdenum cofactor synthesis 3","protein-coding"]
[315,"chr10",85386724,85388757,"+",0,"NA","exon (NM_028709, exon 1 of 17)","exon (NM_028709, exon 1 of 17)",926,"NM_028709",74007,"Mm.36544","NM_028709","ENSMUSG00000020042","Btbd11","6330404E16Rik","BTB (POZ) domain containing 11","protein-coding"]
[2514,"chr5",34949433,34950046,"+",0,"NA","intron (NM_173402, intron 1 of 16)","CpG",291,"NM_173402",71729,"Mm.196208","NM_173402","ENSMUSG00000029101","Rgs12","1200016K18Rik|4632412M04Rik|AI481290|E130309H11","regulator of G-protein signaling 12","protein-coding"]
[1827,"chr2",29619581,29620049,"+",0,"NA","promoter-TSS (NM_001039086)","promoter-TSS (NM_001039086)",95,"NM_001039086",107746,"Mm.298274","NM_054050","ENSMUSG00000039844","Rapgef1","4932418O06Rik|C3G|Grf2","Rap guanine nucleotide exchange factor (GEF) 1","protein-coding"]
[2501,"chr5",31613822,31614287,"+",0,"NA","intron (NM_025796, intron 1 of 3)","CpG",103,"NM_025796",66845,"Mm.120763","NM_025796","ENSMUSG00000106918","Mrpl33","0610009M10Rik|L33mt|MRP-L33","mitochondrial ribosomal protein L33","protein-coding"]
[2366,"chr4",130359499,130360429,"+",0,"NA","promoter-TSS (NM_153160)","promoter-TSS (NM_153160)",-21,"NM_153160",619605,"Mm.297196","NM_153160","ENSMUSG00000028772","Zcchc17","2810055E05Rik|HSPC251|LDC4|pNO40|pS1D","zinc finger, CCHC domain containing 17","protein-coding"]
[1947,"chr2",119617907,119618543,"+",0,"NA","promoter-TSS (NM_133851)","promoter-TSS (NM_133851)",-73,"NM_133851",108907,"Mm.290015","NM_133851","ENSMUSG00000027306","Nusap1","2610201A12Rik|AI481307|ANKT|AW547774|BB165529|BM037|LNP|NuSAP|Q0310|SAPL","nucleolar and spindle associated protein 1","protein-coding"]
[1347,"chr16",94370521,94371504,"+",0,"NA","promoter-TSS (NM_019543)","promoter-TSS (NM_019543)",3,"NM_019543",56176,"Mm.474449","NM_019543","ENSMUSG00000022940","Pigp","Dcrc|Dscr5","phosphatidylinositol glycan anchor biosynthesis, class P","protein-coding"]
[222,"chr10",44268149,44268671,"+",0,"NA","promoter-TSS (NM_001314013)","promoter-TSS (NM_001314013)",71,"NM_053069",11793,"Mm.22264","NM_053069","ENSMUSG00000038160","Atg5","2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy","autophagy related 5","protein-coding"]
[3350,"chr9",44252596,44253501,"+",0,"NA","3' UTR (NM_001163743, exon 10 of 10)","3' UTR (NM_001163743, exon 10 of 10)",-1584,"NM_133226",170761,"Mm.29872","NM_133226","ENSMUSG00000032105","Pdzd3","NaPi-Cap2|Pdzk2","PDZ domain containing 3","protein-coding"]
[2911,"chr7",30355453,30356089,"+",0,"NA","exon (NM_175478, exon 3 of 3)","exon (NM_175478, exon 3 of 3)",7001,"NM_175478",233067,"Mm.23157","NM_175478","ENSMUSG00000036957","Lrfn3","A530045B06Rik|SALM4","leucine rich repeat and fibronectin type III domain containing 3","protein-coding"]
[1504,"chr17",72836586,72837845,"+",0,"NA","intron (NM_027166, intron 1 of 2)","CpG",511,"NM_027166",383295,"Mm.277533","NM_027166","ENSMUSG00000039770","Ypel5","2310076K21Rik|CGI-127","yippee-like 5 (Drosophila)","protein-coding"]
[25,"chr1",42851005,42851705,"+",0,"NA","exon (NM_023514, exon 1 of 11)","exon (NM_023514, exon 1 of 11)",122,"NM_023514",69527,"Mm.252982","NM_023514","ENSMUSG00000060679","Mrps9","2310002A08Rik|AW322516|Mrp-S9|S9mt|mg637","mitochondrial ribosomal protein S9","protein-coding"]
[2270,"chr4",47091882,47092466,"+",0,"NA","exon (NM_172693, exon 1 of 10)","exon (NM_172693, exon 1 of 10)",221,"NM_172693",230145,"Mm.132246","NM_172693","ENSMUSG00000039774","Galnt12","9130206E10|A630062B03Rik","UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12","protein-coding"]
[2418,"chr4",142083965,142085011,"+",0,"NA","promoter-TSS (NM_145402)","promoter-TSS (NM_145402)",-184,"NM_145402",214359,"Mm.27587","NM_145402","ENSMUSG00000040616","Tmem51","BC003277","transmembrane protein 51","protein-coding"]
[3132,"chr8",26157962,26159030,"+",0,"NA","exon (NM_199042, exon 1 of 3)","exon (NM_199042, exon 1 of 3)",327,"NM_199042",73754,"Mm.383241","NM_199042",null,"Thap1","4833431A01Rik|AW490810","THAP domain containing, apoptosis associated protein 1","protein-coding"]
[305,"chr10",81270675,81271623,"+",0,"NA","promoter-TSS (NR_037218)","promoter-TSS (NR_037218)",-448,"NR_037218",100526465,null,"NR_037218","ENSMUSG00000092781","Mir3057","mir-3057|mmu-mir-3057","microRNA 3057","ncRNA"]
[1253,"chr16",13780368,13781122,"+",0,"NA","promoter-TSS (NM_001039521)","promoter-TSS (NM_001039521)",46,"NM_001039521",106298,"Mm.288606","NM_001039521","ENSMUSG00000022682","Rrn3","AL023001|E130302O19Rik|R75565|TIF-1A|Tif1a","RRN3 RNA polymerase I transcription factor homolog (yeast)","protein-coding"]
[928,"chr13",74349934,74350495,"+",0,"NA","promoter-TSS (NM_001168658)","promoter-TSS (NM_001168658)",26,"NM_023281",66945,"Mm.158231","NM_023281","ENSMUSG00000021577","Sdha","1500032O14Rik|2310034D06Rik|4921513A11|C81073|FP|SDH2|SDHF","succinate dehydrogenase complex, subunit A, flavoprotein (Fp)","protein-coding"]
[1644,"chr19",5490234,5491750,"+",0,"NA","intron (NM_007687, intron 1 of 3)","CpG",537,"NM_007687",12631,"Mm.329655","NM_007687",null,"Cfl1","AA959946|Cof","cofilin 1, non-muscle","protein-coding"]
[1526,"chr18",6489853,6491222,"+",0,"NA","TTS (NR_035446)","TTS (NR_035446)",109,"NR_035446",100316773,null,"NR_035446","ENSMUSG00000084514","Mir1893","Mirn1893|mmu-mir-1893","microRNA 1893","ncRNA"]
[3245,"chr8",106683026,106683675,"+",0,"NA","intron (NM_173037, intron 1 of 17)","CpG",282,"NM_173037",272538,"Mm.87151","NM_173037","ENSMUSG00000041949","Tango6","AW413431|E330010G16|Tmco7","transport and golgi organization 6","protein-coding"]
[217,"chr10",42501816,42502806,"+",0,"NA","5' UTR (NM_017472, exon 1 of 4)","5' UTR (NM_017472, exon 1 of 4)",257,"NM_017472",54198,"Mm.277870","NM_017472","ENSMUSG00000019804","Snx3","SDP3","sorting nexin 3","protein-coding"]
[2648,"chr5",127632169,127632917,"+",0,"NA","intron (NM_177005, intron 1 of 11)","CpG",281,"NM_177005",319804,"Mm.237888","NM_177005",null,"Glt1d1","5730455A04Rik","glycosyltransferase 1 domain containing 1","protein-coding"]
[1730,"chr19",41981361,41982534,"+",0,"NA","promoter-TSS (NM_028152)","promoter-TSS (NM_028152)",184,"NM_145500",226122,"Mm.22948","NM_145500","ENSMUSG00000025171","Ubtd1","BC016129","ubiquitin domain containing 1","protein-coding"]
[158,"chr1",178527929,178529423,"+",0,"NA","promoter-TSS (NM_001161665)","promoter-TSS (NM_001161665)",-449,"NM_001161665",269152,"Mm.129727","NM_177724","ENSMUSG00000026494","Kif26b","4832420M10|BC056349|D230039L06Rik","kinesin family member 26B","protein-coding"]
[281,"chr10",80035198,80036277,"+",0,"NA","TTS (NM_025554)","TTS (NM_025554)",3922,"NM_025554",66420,"Mm.18579","NM_025554","ENSMUSG00000004667","Polr2e","2410021N14Rik|25kDa|AW208866|RPB5|XAP4","polymerase (RNA) II (DNA directed) polypeptide E","protein-coding"]
[46,"chr1",60409517,60410253,"+",0,"NA","exon (NM_001198571, exon 1 of 11)","exon (NM_001198571, exon 1 of 11)",266,"NM_001198570",329165,"Mm.212066","NM_198127","ENSMUSG00000026782","Abi2","8430425M24Rik|AI839867|C130078H13","abl-interactor 2","protein-coding"]
[3412,"chr9",72806929,72807803,"+",0,"NA","promoter-TSS (NM_175485)","promoter-TSS (NM_175485)",92,"NM_175485",235472,"Mm.31696","NM_175485","ENSMUSG00000036030","Prtg","A230098A12Rik|Igdcc5","protogenin homolog (Gallus gallus)","protein-coding"]
[1851,"chr2",32151137,32151761,"+",0,"NA","intron (NM_001159634, intron 1 of 31)","CpG",301,"NM_001159634",227723,"Mm.25504","NM_172661","ENSMUSG00000039262","Prrc2b","5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515","proline-rich coiled-coil 2B","protein-coding"]
[1316,"chr16",38562650,38563255,"+",0,"NA","5' UTR (NM_001205287, exon 1 of 9)","5' UTR (NM_001205287, exon 1 of 9)",138,"NM_026407",67846,"Mm.310476","NM_026407","ENSMUSG00000002845","Tmem39a","2610033C09Rik","transmembrane protein 39a","protein-coding"]
[3327,"chr9",21165685,21166349,"+",0,"NA","exon (NM_183408, exon 1 of 15)","exon (NM_183408, exon 1 of 15)",303,"NM_183408",18577,"Mm.191749","NM_019798","ENSMUSG00000032177","Pde4a","D9Ertd60e|Dpde2","phosphodiesterase 4A, cAMP specific","protein-coding"]
[2630,"chr5",122850037,122850867,"+",0,"NA","intron (NM_030564, intron 1 of 5)","CpG",264,"NM_030564",80751,"Mm.388529","NM_030564",null,"Rnf34","AW061037|AW536122|BC004042|C88279|RIFF","ring finger protein 34","protein-coding"]
[2373,"chr4",132768254,132768890,"+",0,"NA","intron (NM_011284, intron 1 of 8)","CpG",212,"NM_011284",19891,"Mm.2870","NM_011284","ENSMUSG00000028884","Rpa2","AA409079|AI325195|AU020965|RPA34|Rf-A2","replication protein A2","protein-coding"]
[1418,"chr17",28575435,28576142,"+",0,"NA","promoter-TSS (NM_026571)","promoter-TSS (NM_026571)",69,"NM_026571",328789,"Mm.284760","NM_026571","ENSMUSG00000062252","Lhfpl5","9330179O15Rik|Tmhs|hscy","lipoma HMGIC fusion partner-like 5","protein-coding"]
[36,"chr1",57406093,57407129,"+",0,"NA","promoter-TSS (NM_001081181)","promoter-TSS (NM_001081181)",63,"NM_001081181",68115,"Mm.275428","NM_001081181",null,"9430016H08Rik","AA409999|C78988","RIKEN cDNA 9430016H08 gene","protein-coding"]
[2263,"chr4",44756488,44757108,"+",0,"NA","intron (NM_138590, intron 1 of 8)","CpG",239,"NM_138590",319885,"Mm.331576","NM_138590","ENSMUSG00000035649","Zcchc7","4930572I07Rik|D4Wsu132e","zinc finger, CCHC domain containing 7","protein-coding"]
[3386,"chr9",57940057,57941254,"+",0,"NA","intron (NM_011352, intron 1 of 13)","CpG",520,"NM_011352",20361,"Mm.335187","NM_011352","ENSMUSG00000038264","Sema7a","2900057C09Rik|CDw108|H-Sema-L|M-Sema-L|Semal","sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A","protein-coding"]
[1368,"chr17",23803112,23804039,"+",0,"NA","intron (NM_175229, intron 1 of 13)","CpG",388,"NM_175229",75956,"Mm.5222","NM_175229","ENSMUSG00000039218","Srrm2","5033413A03Rik|AA410130|SRm300|mKIAA0324","serine/arginine repetitive matrix 2","protein-coding"]
[748,"chr12",65075367,65076130,"+",0,"NA","exon (NM_178912, exon 1 of 23)","exon (NM_178912, exon 1 of 23)",142,"NM_178912",104806,"Mm.374847","NM_178912","ENSMUSG00000055884","Fancm","AI427100|C730036B14Rik|D12Ertd364e","Fanconi anemia, complementation group M","protein-coding"]
[472,"chr11",63132382,63133366,"+",0,"NA","promoter-TSS (NM_001302260)","promoter-TSS (NM_001302260)",71,"NM_001302260",18858,"Mm.1237","NM_008885","ENSMUSG00000018217","Pmp22","22kDa|Gas-3|HNPP|Tr|trembler","peripheral myelin protein 22","protein-coding"]
[3505,"chr9",122572086,122572939,"+",0,"NA","promoter-TSS (NR_015610)","promoter-TSS (NR_015610)",11,"NR_015610",319626,"Mm.186748","NR_015610","ENSMUSG00000097736","9530059O14Rik","-","RIKEN cDNA 9530059O14 gene","ncRNA"]
[1655,"chr19",6067756,6068395,"+",0,"NA","promoter-TSS (NM_028454)","promoter-TSS (NM_028454)",-225,"NM_028454",73166,"Mm.489613","NM_028454","ENSMUSG00000024799","Tm7sf2","3110041O18Rik|ANG1|C14SR|Dhcr14","transmembrane 7 superfamily member 2","protein-coding"]
[1943,"chr2",119167333,119168090,"+",0,"NA","promoter-TSS (NM_177157)","promoter-TSS (NM_177157)",-77,"NM_177157",320415,"Mm.86373","NM_177157","ENSMUSG00000046814","Gchfr","2010323F13Rik|GFRP|P35","GTP cyclohydrolase I feedback regulator","protein-coding"]
[317,"chr10",86021637,86022424,"+",0,"NA","promoter-TSS (NM_001310745)","promoter-TSS (NM_001310745)",101,"NM_153195",69754,"Mm.44236","NM_153195","ENSMUSG00000001786","Fbxo7","2410015K21Rik|A230052G17Rik|AI117679|AW260462|C85118","F-box protein 7","protein-coding"]
[711,"chr11",121420966,121421868,"+",0,"NA","promoter-TSS (NM_181420)","promoter-TSS (NM_181420)",44,"NM_181420",238024,"Mm.117394","NM_181420","ENSMUSG00000039253","Fn3krp","FN3K-RP","fructosamine 3 kinase related protein","protein-coding"]
[132,"chr1",151571195,151571787,"+",0,"NA","5' UTR (NM_022018, exon 1 of 14)","5' UTR (NM_022018, exon 1 of 14)",118,"NM_022018",63913,"Mm.157700","NM_022018",null,"Fam129a","AI256368|AU019833|Niban","family with sequence similarity 129, member A","protein-coding"]
[1791,"chr2",23068006,23068737,"+",0,"NA","promoter-TSS (NM_001102438)","promoter-TSS (NM_001102438)",170,"NM_001102436",74159,"Mm.181973","NM_028793","ENSMUSG00000026781","Acbd5","1300014E15Rik","acyl-Coenzyme A binding domain containing 5","protein-coding"]
[1254,"chr16",13818870,13819419,"+",0,"NA","promoter-TSS (NM_010946)","promoter-TSS (NM_010946)",-133,"NM_010946",18203,"Mm.380410","NM_010946","ENSMUSG00000022681","Ntan1","-","N-terminal Asn amidase","protein-coding"]
[1642,"chr19",5366403,5367564,"+",0,"NA","promoter-TSS (NM_001038231)","promoter-TSS (NM_001038231)",-107,"NM_011793",23825,"Mm.358649","NM_011793","ENSMUSG00000024844","Banf1","Baf|Bcrp1|L2bp1/Baf","barrier to autointegration factor 1","protein-coding"]
[892,"chr13",49681898,49682377,"+",0,"NA","promoter-TSS (NM_172015)","promoter-TSS (NM_172015)",7,"NM_172015",105148,"Mm.21118","NM_172015","ENSMUSG00000037851","Iars","2510016L12Rik|AI327140|AU044614|E430001P04Rik|ILRS","isoleucine-tRNA synthetase","protein-coding"]
[2180,"chr3",108256626,108257200,"+",0,"NA","promoter-TSS (NM_011967)","promoter-TSS (NM_011967)",-13,"NM_011967",26442,"Mm.208883","NM_011967","ENSMUSG00000068749","Psma5","ZETA","proteasome (prosome, macropain) subunit, alpha type 5","protein-coding"]
[2769,"chr6",65042515,65043223,"+",0,"NA","promoter-TSS (NM_001253392)","promoter-TSS (NM_001253392)",202,"NM_007958",13990,"Mm.99113","NM_007958","ENSMUSG00000029920","Smarcad1","AV081750|AW226546|D6Pas1|Etl1|mKIAA1122","SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1","protein-coding"]
[2071,"chr2",180119130,180120214,"+",0,"NA","intron (NM_144500, intron 1 of 13)","CpG",306,"NM_144500",228983,"Mm.253578","NM_144500","ENSMUSG00000039050","Osbpl2","C130070J12Rik|ORP-2|Orp2|mKIAA0772","oxysterol binding protein-like 2","protein-coding"]
[1428,"chr17",30901595,30902827,"+",0,"NA","intron (NM_021332, intron 1 of 12)","intron (NM_021332, intron 1 of 12)",344,"NM_021332",14652,"Mm.390969","NM_021332","ENSMUSG00000024027","Glp1r","GLP-1R|GLP1Rc","glucagon-like peptide 1 receptor","protein-coding"]
[546,"chr11",78924956,78925544,"+",0,"NA","promoter-TSS (NM_001313922)","promoter-TSS (NM_001313922)",-41,"NM_001313922",18126,"Mm.2893","NM_010927","ENSMUSG00000020826","Nos2","MAC-NOS|NOS-II|Nos-2|Nos2a|i-NOS|iNOS","nitric oxide synthase 2, inducible","protein-coding"]
[537,"chr11",78177764,78178640,"+",0,"NA","promoter-TSS (NM_026708)","promoter-TSS (NM_026708)",53,"NM_001291237",68385,"Mm.390375","NM_026708","ENSMUSG00000019437","Tlcd1","-","TLC domain containing 1","protein-coding"]
[1018,"chr14",47649104,47650004,"+",0,"NA","intron (NM_001293635, intron 1 of 40)","CpG",243,"NM_001293635",16709,"Mm.3110","NM_008477","ENSMUSG00000021843","Ktn1","-","kinectin 1","protein-coding"]
[1125,"chr15",74955049,74955942,"+",0,"NA","5' UTR (NM_008529, exon 1 of 4)","5' UTR (NM_008529, exon 1 of 4)",389,"NM_001164040",17069,"Mm.788","NM_008529","ENSMUSG00000022587","Ly6e","Ly67|RIG-E|Sca-2|TSA-1|Tsa1","lymphocyte antigen 6 complex, locus E","protein-coding"]
[2279,"chr4",56740005,56741056,"+",0,"NA","exon (NM_025271, exon 1 of 1)","exon (NM_025271, exon 1 of 1)",895,"NM_025271",11471,"Mm.251434","NM_025271","ENSMUSG00000070980","Actl7b","Tact1","actin-like 7b","protein-coding"]
[1007,"chr14",34310180,34310813,"+",0,"NA","promoter-TSS (NM_029389)","promoter-TSS (NM_029389)",7,"NM_029389",75698,"Mm.45406","NM_029389","ENSMUSG00000041471","Fam35a","3110001K24Rik","family with sequence similarity 35, member A","protein-coding"]
[1443,"chr17",34646890,34647815,"+",0,"NA","intron (NM_017406, intron 1 of 17)","CpG",206,"NM_017406",12915,"Mm.4068","NM_017406","ENSMUSG00000015461","Atf6b","AA617266|ATF6beta|Creb-rp|Crebl1","activating transcription factor 6 beta","protein-coding"]
[741,"chr12",35046715,35047942,"+",0,"NA","5' UTR (NM_001014973, exon 1 of 26)","5' UTR (NM_001014973, exon 1 of 26)",139,"NM_001014973",217463,"Mm.213991","NM_001014973","ENSMUSG00000020590","Snx13","Rgs-px1|mKIAA0713","sorting nexin 13","protein-coding"]
[3298,"chr8",123224662,123225342,"+",0,"NA","intron (NM_194446, intron 1 of 12)","CpG",161,"NM_194444",234854,"Mm.190984","NM_194444","ENSMUSG00000033862","Cdk10","BC017131","cyclin-dependent kinase 10","protein-coding"]
[1833,"chr2",30133550,30134154,"+",0,"NA","promoter-TSS (NM_146252)","promoter-TSS (NM_146252)",-19,"NM_146252",70296,"Mm.19172","NM_146252","ENSMUSG00000039678","Tbc1d13","2600014A06Rik|BC025586","TBC1 domain family, member 13","protein-coding"]
[1186,"chr15",84922620,84924108,"+",0,"NA","promoter-TSS (NM_016714)","promoter-TSS (NM_016714)",-64,"NM_016714",18141,"Mm.28379","NM_016714","ENSMUSG00000016619","Nup50","1700030K07Rik|AI413123|Npap60","nucleoporin 50","protein-coding"]
[998,"chr14",31336383,31337208,"+",0,"NA","promoter-TSS (NM_009796)","promoter-TSS (NM_009796)",71,"NM_009796",12339,"Mm.201535","NM_009796","ENSMUSG00000021893","Capn7","AU022319|PalBH","calpain 7","protein-coding"]
[3119,"chr8",13404851,13405631,"+",0,"NA","exon (NM_011881, exon 1 of 7)","exon (NM_011881, exon 1 of 7)",160,"NM_011881",24013,"Mm.257501","NM_011881","ENSMUSG00000031450","Grk1","Gprk1|Rhok|Rk","G protein-coupled receptor kinase 1","protein-coding"]
[2806,"chr6",91515466,91516409,"+",0,"NA","promoter-TSS (NM_009531)","promoter-TSS (NM_009531)",-49,"NM_009531",22591,"Mm.2806","NM_009531","ENSMUSG00000030094","Xpc","-","xeroderma pigmentosum, complementation group C","protein-coding"]
[3032,"chr7",122219204,122220161,"+",0,"NA","5' UTR (NM_027363, exon 1 of 7)","5' UTR (NM_027363, exon 1 of 7)",186,"NM_027363",70261,"Mm.96997","NM_027363","ENSMUSG00000030865","Chp2","2010110P09Rik|Cbhp2","calcineurin-like EF hand protein 2","protein-coding"]
[1789,"chr2",19657361,19659167,"+",0,"NA","promoter-TSS (NR_033642)","promoter-TSS (NR_033642)",202,"NM_027715",71198,"Mm.83981","NM_027715","ENSMUSG00000043415","Otud1","4933428L19Rik","OTU domain containing 1","protein-coding"]
[2240,"chr4",24496325,24496950,"+",0,"NA","5' UTR (NM_199467, exon 1 of 24)","5' UTR (NM_199467, exon 1 of 24)",175,"NM_199467",212377,"Mm.120919","NM_199467","ENSMUSG00000045751","Mms22l","F730047E07Rik|Gm134","MMS22-like, DNA repair protein","protein-coding"]
[3192,"chr8",84011078,84012364,"+",0,"NA","promoter-TSS (NR_035431)","promoter-TSS (NR_035431)",-1,"NM_001291292",70134,"Mm.41017","NM_001291292",null,"2210011C24Rik","-","RIKEN cDNA 2210011C24 gene","protein-coding"]
[2076,"chr2",180724965,180725727,"+",0,"NA","promoter-TSS (NM_183161)","promoter-TSS (NM_183161)",7,"NM_183161",228993,"Mm.87189","NM_183161","ENSMUSG00000023393","Slc17a9","1700019H03Rik|BC019537|Vnut","solute carrier family 17, member 9","protein-coding"]
[529,"chr11",77348042,77348754,"+",0,"NA","5' UTR (NM_001291190, exon 1 of 14)","5' UTR (NM_001291190, exon 1 of 14)",118,"NM_001291190",237860,"Mm.440381","NM_177710","ENSMUSG00000037926","Ssh2","SSH-2|SSH-2L|mSSH-2L","slingshot homolog 2 (Drosophila)","protein-coding"]
[1545,"chr18",31633736,31634925,"+",0,"NA","promoter-TSS (NM_172965)","promoter-TSS (NM_172965)",-53,"NM_172965",269003,"Mm.194538","NM_172965","ENSMUSG00000024260","Sap130","2610304F09Rik|6720406D06","Sin3A associated protein","protein-coding"]
[1838,"chr2",30472621,30474822,"+",0,"NA","exon (NM_030244, exon 1 of 1)","exon (NM_030244, exon 1 of 1)",478,"NM_030244",72500,"Mm.295464","NM_030244",null,"Ier5l","2610524G09Rik","immediate early response 5-like","protein-coding"]
[1773,"chr2",4717422,4718316,"+",0,"NA","promoter-TSS (NM_178663)","promoter-TSS (NM_178663)",38,"NM_178663",209645,"Mm.149539","NM_178663","ENSMUSG00000048186","Bend7","1110017O21Rik|E130319B15Rik","BEN domain containing 7","protein-coding"]
[1058,"chr14",76110449,76111332,"+",0,"NA","promoter-TSS (NM_013745)","promoter-TSS (NM_013745)",-1,"NM_013745",27275,"Mm.21138","NM_013745","ENSMUSG00000022009","Nufip1","Nufip","nuclear fragile X mental retardation protein interacting protein 1","protein-coding"]
[3166,"chr8",70373326,70374014,"+",0,"NA","intron (NM_016685, intron 1 of 18)","intron (NM_016685, intron 1 of 18)",122,"NM_016685",12845,"Mm.45071","NM_016685","ENSMUSG00000031849","Comp","TSP5","cartilage oligomeric matrix protein","protein-coding"]
[2573,"chr5",105415210,105415937,"+",0,"NA","promoter-TSS (NM_001033550)","promoter-TSS (NM_001033550)",-202,"NM_001033550",433926,"Mm.439781","NM_001033550",null,"Lrrc8b","R75581|Ta-lrrp|mKIAA0231","leucine rich repeat containing 8 family, member B","protein-coding"]
[987,"chr14",27428386,27429413,"+",0,"NA","promoter-TSS (NM_028945)","promoter-TSS (NM_028945)",52,"NM_001114879",218850,"Mm.247767","NM_028945","ENSMUSG00000040651","Fam208a","4732418E12|4933409E02Rik|D14Abb1e|MommeD6","family with sequence similarity 208, member A","protein-coding"]
[2984,"chr7",96210107,96211144,"+",0,"NA","promoter-TSS (NM_011858)","promoter-TSS (NM_011858)",-12,"NM_011858",23966,"Mm.254610","NM_011858","ENSMUSG00000048078","Tenm4","Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302","teneurin transmembrane protein 4","protein-coding"]
[1150,"chr15",78428425,78429628,"+",0,"NA","intron (NM_001289671, intron 1 of 7)","intron (NM_001289671, intron 1 of 7)",462,"NR_110357",72844,"Mm.390816","NM_001081367","ENSMUSG00000033287","Kctd17","2900008M13Rik|AA414907|AW742389|N28155","potassium channel tetramerisation domain containing 17","protein-coding"]
[3392,"chr9",59617148,59617820,"+",0,"NA","intron (NR_038074, intron 1 of 22)","CpG",200,"NR_038074",67287,"Mm.439943","NM_029922","ENSMUSG00000025237","Parp6","1700119G14Rik|2310028P13Rik|3110038K10Rik|ARTD17|C030013N01Rik|PARP-6","poly (ADP-ribose) polymerase family, member 6","protein-coding"]
[2860,"chr6",146888009,146889019,"+",0,"NA","promoter-TSS (NM_026221)","promoter-TSS (NM_026221)",20,"NM_026221",67533,"Mm.103382","NM_026221","ENSMUSG00000016487","Ppfibp1","4632409B19Rik|AW214454|AW261454","PTPRF interacting protein, binding protein 1 (liprin beta 1)","protein-coding"]
[3141,"chr8",40511615,40512424,"+",0,"NA","promoter-TSS (NM_001271543)","promoter-TSS (NM_001271543)",236,"NM_033560",52348,"Mm.489696","NM_033560","ENSMUSG00000031600","Vps37a","2210018P21Rik|4930592A21Rik|AW261445|D8Ertd531e","vacuolar protein sorting 37A (yeast)","protein-coding"]
[1535,"chr18",12643173,12644159,"+",0,"NA","5' UTR (NM_028341, exon 1 of 14)","5' UTR (NM_028341, exon 1 of 14)",133,"NM_028341",72747,"Mm.52526","NM_028341","ENSMUSG00000024424","Ttc39c","1700008N02Rik|2810439F02Rik","tetratricopeptide repeat domain 39C","protein-coding"]
[2390,"chr4",136143603,136144249,"+",0,"NA","exon (NM_008321, exon 1 of 3)","exon (NM_008321, exon 1 of 3)",104,"NM_008321",15903,"Mm.110","NM_008321",null,"Id3","Hlh462|Idb3|bHLHb25","inhibitor of DNA binding 3","protein-coding"]
[1335,"chr16",90386301,90387186,"+",0,"NA","intron (NM_015755, intron 1 of 10)","CpG",346,"NM_015755",26559,"Mm.125874","NM_015755","ENSMUSG00000053414","Hunk","Bstk1|Mak-v","hormonally upregulated Neu-associated kinase","protein-coding"]
[908,"chr13",55714460,55715192,"+",0,"NA","exon (NM_175150, exon 1 of 5)","exon (NM_175150, exon 1 of 5)",176,"NM_175150",69672,"Mm.294457","NM_175150","ENSMUSG00000021497","Txndc15","2310047H23Rik|AI854086|C5orf14|UNQ335","thioredoxin domain containing 15","protein-coding"]
[2580,"chr5",108065446,108065999,"+",0,"NA","promoter-TSS (NM_013827)","promoter-TSS (NM_013827)",48,"NM_013827",17765,"Mm.257149","NM_013827","ENSMUSG00000029267","Mtf2","9230112N11Rik|AA537621|C76717|M96|Pcl2","metal response element binding transcription factor 2","protein-coding"]
[3409,"chr9",70542755,70543389,"+",0,"NA","exon (NM_025690, exon 1 of 21)","exon (NM_025690, exon 1 of 21)",202,"NM_025690",66660,"Mm.22379","NM_025690","ENSMUSG00000032212","Sltm","5730455C01Rik|5730555F13Rik|9130215G10Rik|Met","SAFB-like, transcription modulator","protein-coding"]
[3127,"chr8",22227019,22227568,"+",0,"NA","promoter-TSS (NM_019576)","promoter-TSS (NM_019576)",-10,"NM_001205253",56229,"Mm.32067","NM_019576","ENSMUSG00000031480","Thsd1","4833423O18Rik|Tmtsp","thrombospondin, type I, domain 1","protein-coding"]
[284,"chr10",80129681,80130446,"+",0,"NA","TTS (NR_036582)","TTS (NR_036582)",7324,"NM_001195268",100503659,"Mm.485395","NM_015761","ENSMUSG00000035640","Cbarp","9630008F14|Dos|R29144/1","calcium channel, voltage-dependent, beta subunit associated regulatory protein","protein-coding"]
[1340,"chr16",91406074,91406683,"+",0,"NA","TTS (NM_010509)","TTS (NM_010509)",143,"NM_008349",16155,"Mm.4154","NM_008349","ENSMUSG00000022969","Il10rb","6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2","interleukin 10 receptor, beta","protein-coding"]
[903,"chr13",55321379,55322227,"+",0,"NA","promoter-TSS (NM_025596)","promoter-TSS (NM_025596)",177,"NM_009000",19336,"Mm.220923","NM_009000","ENSMUSG00000034789","Rab24","6530406O07Rik","RAB24, member RAS oncogene family","protein-coding"]
[247,"chr10",69212538,69213802,"+",0,"NA","promoter-TSS (NM_001252638)","promoter-TSS (NM_001252638)",-24,"NM_001252637",69288,"Mm.26659","NM_001081347","ENSMUSG00000019944","Rhobtb1","1700008H16Rik|3110048G13Rik|AI173445|AI573858|AV350930","Rho-related BTB domain containing 1","protein-coding"]
[165,"chr1",180942102,180943200,"+",0,"NA","intron (NM_144794, intron 1 of 22)","CpG",133,"NM_144794",208795,"Mm.185518","NM_144794","ENSMUSG00000026519","Tmem63a","BC014795|Tmem64a","transmembrane protein 63a","protein-coding"]
[289,"chr10",80292236,80292911,"+",0,"NA","promoter-TSS (NM_001310726)","promoter-TSS (NM_001310726)",64,"NM_001310726",20054,"Mm.643","NM_009091","ENSMUSG00000063457","Rps15","rig","ribosomal protein S15","protein-coding"]
[2351,"chr4",126753141,126754391,"+",0,"NA","promoter-TSS (NM_133886)","promoter-TSS (NM_133886)",-4,"NM_133886",100317,"Mm.206206","NM_133886","ENSMUSG00000028830","AU040320","A730047D20Rik|Kiaa0319l","expressed sequence AU040320","protein-coding"]
[729,"chr12",17266417,17266999,"+",0,"NA","intron (NM_027959, intron 1 of 12)","CpG",113,"NM_027959",71853,"Mm.222825","NM_027959","ENSMUSG00000020571","Pdia6","1700015E05Rik|AL023058|C77895|CaBP5|P5|Txndc7","protein disulfide isomerase associated 6","protein-coding"]
[2119,"chr3",61363598,61365777,"+",0,"NA","5' UTR (NM_028712, exon 1 of 1)","5' UTR (NM_028712, exon 1 of 1)",180,"NM_028712",74012,"Mm.422674","NM_028712",null,"Rap2b","4021402C18Rik|AA408554","RAP2B, member of RAS oncogene family","protein-coding"]
[2,"chr1",6214211,6215322,"+",0,"NA","5' UTR (NM_009826, exon 1 of 24)","5' UTR (NM_009826, exon 1 of 24)",104,"NM_009826",12421,"Mm.293811","NM_009826","ENSMUSG00000025907","Rb1cc1","2900055E04Rik|5930404L04Rik|Cc1|FIP200|LaXp180","RB1-inducible coiled-coil 1","protein-coding"]
[808,"chr12",103388614,103389174,"+",0,"NA","intron (NM_026580, intron 1 of 5)","CpG",212,"NM_001177841",68149,"Mm.127378","NM_026580","ENSMUSG00000021203","Otub2","2010015L18Rik|4930586I02Rik|AI413508|AW557219|OTB2|OTU2","OTU domain, ubiquitin aldehyde binding 2","protein-coding"]
[845,"chr12",113013957,113015119,"+",0,"NA","promoter-TSS (NM_001081170)","promoter-TSS (NM_001081170)",30,"NM_001291444",217893,"Mm.35754","NM_198165","ENSMUSG00000021143","Pacs2","6720425G15Rik|AW208651|AW489976|E230011J22|Pacs1l|mKIAA0602","phosphofurin acidic cluster sorting protein 2","protein-coding"]
[2125,"chr3",66985531,66986255,"+",0,"NA","intron (NM_025822, intron 1 of 9)","CpG",221,"NM_025822",66880,"Mm.316418","NM_025822","ENSMUSG00000034544","Rsrc1","1200013F24Rik|SRrp53","arginine/serine-rich coiled-coil 1","protein-coding"]
[2553,"chr5",88564868,88565865,"+",0,"NA","exon (NM_001289775, exon 1 of 13)","exon (NM_001289775, exon 1 of 13)",326,"NM_001289775",52822,"Mm.270469","NM_027530","ENSMUSG00000029291","Rufy3","2810428M05Rik|6330416M07Rik|AW455998|AW538594|D5Bwg0860e|Ripx|Rpipx","RUN and FYVE domain containing 3","protein-coding"]
[1847,"chr2",31887055,31887932,"+",0,"NA","exon (NM_011836, exon 1 of 28)","exon (NM_011836, exon 1 of 28)",212,"NM_011836",23928,"Mm.302362","NM_011836","ENSMUSG00000026840","Lamc3","AI562206|AW240805","laminin gamma 3","protein-coding"]
[1231,"chr15",102921130,102922304,"+",0,"NA","exon (NM_010464, exon 1 of 2)","exon (NM_010464, exon 1 of 2)",586,"NM_010464",15422,"Mm.207062","NM_010464","ENSMUSG00000001655","Hoxc13","-","homeobox C13","protein-coding"]
[2979,"chr7",84528874,84529528,"+",0,"NA","intron (NR_045098, intron 1 of 2)","CpG",247,"NR_045098",100039239,"Mm.44882","NR_045098","ENSMUSG00000097789","Gm2115","C77713","predicted gene 2115","ncRNA"]
[3270,"chr8",119344200,119344846,"+",0,"NA","promoter-TSS (NM_024219)","promoter-TSS (NM_024219)",-15,"NM_024219",68196,"Mm.358714","NM_024219","ENSMUSG00000031839","Hsbp1","0610007A03Rik|AA408769|Hsp25","heat shock factor binding protein 1","protein-coding"]
[1249,"chr16",11322680,11323893,"+",0,"NA","intron (NM_028964, intron 1 of 20)","intron (NM_028964, intron 1 of 20)",382,"NM_028964",74478,"Mm.325831","NM_028964","ENSMUSG00000071669","Snx29","4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a","sorting nexin 29","protein-coding"]
[147,"chr1",167000812,167002146,"+",0,"NA","promoter-TSS (NM_001160262)","promoter-TSS (NM_001160262)",62,"NM_001160261",226610,"Mm.389217","NM_175461","ENSMUSG00000060568","Fam78b","C030014K22Rik|C030020L09Rik","family with sequence similarity 78, member B","protein-coding"]
[2446,"chr4",154855414,154856699,"+",0,"NA","promoter-TSS (NM_172878)","promoter-TSS (NM_172878)",-144,"NM_172878",242800,"Mm.72944","NM_172878","ENSMUSG00000046637","Ttc34","4932418L02|B230396O12Rik","tetratricopeptide repeat domain 34","protein-coding"]
[973,"chr14",19750816,19751561,"+",0,"NA","promoter-TSS (NM_008695)","promoter-TSS (NM_008695)",-69,"NM_008695",18074,"Mm.20348","NM_008695","ENSMUSG00000021806","Nid2","AW547149|Ly111|NID-2|entactin-2|nidogen-2","nidogen 2","protein-coding"]
[2961,"chr7",79504854,79505691,"+",0,"NA","promoter-TSS (NR_029818)","promoter-TSS (NR_029818)",8,"NR_029818",723968,null,"NR_029818","ENSMUSG00000093238","Mir9-3","Mirn9-3|mir-9-3|mmu-mir-9-3","microRNA 9-3","ncRNA"]
[2569,"chr5",103753629,103754423,"+",0,"NA","promoter-TSS (NM_133919)","promoter-TSS (NM_133919)",-136,"NM_133919",17355,"Mm.6949","NM_133919","ENSMUSG00000029313","Aff1","9630032B01Rik|AW319193|Af4|Mllt2h|Rob","AF4/FMR2 family, member 1","protein-coding"]
[1046,"chr14",66868580,66869445,"+",0,"NA","promoter-TSS (NM_009955)","promoter-TSS (NM_009955)",162,"NM_001034881",432870,"Mm.425890","NM_001034881","ENSMUSG00000075553","Gm5464","EG432870","predicted gene 5464","protein-coding"]
[1142,"chr15",76476790,76477953,"+",0,"NA","promoter-TSS (NM_008296)","promoter-TSS (NM_008296)",-74,"NM_008296",15499,"Mm.347444","NM_008296","ENSMUSG00000022556","Hsf1","AA960185|Hsf1alpha|Hsf1beta","heat shock factor 1","protein-coding"]
[2095,"chr3",33799731,33800638,"+",0,"NA","promoter-TSS (NM_001290500)","promoter-TSS (NM_001290500)",1,"NM_025978",67120,"Mm.275710","NM_025978","ENSMUSG00000027677","Ttc14","2700016E08Rik|4930434D01Rik|4931403I22Rik|4933402I15Rik|AI662468|AU014779|AW561908|cI-44|mKIAA1980","tetratricopeptide repeat domain 14","protein-coding"]
[1291,"chr16",29209636,29210456,"+",0,"NA","intron (NM_013751, intron 1 of 3)","CpG",351,"NM_013751",27281,"Mm.103650","NM_013751","ENSMUSG00000022525","Hrasls","2810012B06Rik|A-C1|HRSL1|Hrasrs","HRAS-like suppressor","protein-coding"]
[3227,"chr8",95351976,95353651,"+",0,"NA","5' UTR (NM_008609, exon 1 of 10)","5' UTR (NM_008609, exon 1 of 10)",476,"NM_008609",17388,"Mm.217116","NM_008609","ENSMUSG00000031790","Mmp15","AI503551|MT2-MMP","matrix metallopeptidase 15","protein-coding"]
[2601,"chr5",115168670,115169423,"+",0,"NA","3' UTR (NM_013879, exon 7 of 7)","3' UTR (NM_013879, exon 7 of 7)",-10870,"NM_175403",109154,"Mm.153963","NM_175403","ENSMUSG00000048578","Mlec","2410014A08Rik|AI850530|ESTM19|X83352|mKIAA0152","malectin","protein-coding"]
[2599,"chr5",115010616,115012159,"+",0,"NA","promoter-TSS (NM_029012)","promoter-TSS (NM_029012)",-137,"NM_029012",74585,"Mm.355894","NM_029012","ENSMUSG00000029550","Sppl3","4833416I09Rik|Psl4|Usmg3","signal peptide peptidase 3","protein-coding"]
[319,"chr10",88146657,88147232,"+",0,"NA","promoter-TSS (NM_027191)","promoter-TSS (NM_027191)",-3,"NM_029249",75317,"Mm.179378","NM_029249","ENSMUSG00000035365","Parpbp","4930547N16Rik|AI503644|PARI","PARP1 binding protein","protein-coding"]
[2960,"chr7",75848077,75848771,"+",0,"NA","promoter-TSS (NM_029652)","promoter-TSS (NM_029652)",86,"NM_029652",207952,"Mm.206223","NM_029652","ENSMUSG00000055652","Klhl25","2810402K13Rik|BC027373|Enc-1","kelch-like 25","protein-coding"]
[2571,"chr5",104459318,104460354,"+",0,"NA","exon (NM_008861, exon 1 of 15)","exon (NM_008861, exon 1 of 15)",379,"NM_008861",18764,"Mm.6442","NM_008861","ENSMUSG00000034462","Pkd2","C030034P18Rik|PC2|TRPP2","polycystic kidney disease 2","protein-coding"]
[2857,"chr6",142756529,142757204,"+",0,"NA","exon (NM_009908, exon 1 of 8)","exon (NM_009908, exon 1 of 8)",180,"NM_009908",12764,"Mm.3820","NM_009908","ENSMUSG00000030282","Cmas","AW208911|CMPNeu5Ac|D6Bwg0250e","cytidine monophospho-N-acetylneuraminic acid synthetase","protein-coding"]
[1179,"chr15",82898903,82899854,"+",0,"NA","promoter-TSS (NR_027799)","promoter-TSS (NR_027799)",298,"NR_045068",100504637,"Mm.440928","NR_045068","ENSMUSG00000100199","Gm20324","-","predicted gene, 20324","ncRNA"]
[1052,"chr14",73142776,73144005,"+",0,"NA","intron (NR_033185, intron 1 of 15)","CpG",605,"NR_033185",105670,"Mm.280068","NM_134083","ENSMUSG00000022106","Rcbtb2","2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2","regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2","protein-coding"]
[1922,"chr2",91730022,91730722,"+",0,"NA","5' UTR (NM_172669, exon 1 of 18)","5' UTR (NM_172669, exon 1 of 18)",234,"NM_001080754",228361,"Mm.436667","NM_172669","ENSMUSG00000040506","Ambra1","2310079H06Rik|A130023A14|AA474864|AV021921|D030051N19Rik|mKIAA1736","autophagy/beclin 1 regulator 1","protein-coding"]
[735,"chr12",30884159,30884992,"+",0,"NA","5' UTR (NM_001159743, exon 1 of 5)","5' UTR (NM_001159743, exon 1 of 5)",251,"NM_001159743",100294583,"Mm.399726","NM_001159743","ENSMUSG00000054204","Fam150b","6230419C23Rik","family with sequence similarity 150, member B","protein-coding"]
[3048,"chr7",127776771,127777480,"+",0,"NA","promoter-TSS (NM_178029)","promoter-TSS (NM_178029)",-264,"NM_178029",233904,"Mm.435494","NM_010940","ENSMUSG00000042308","Setd1a","BC010250|KMT2F|Nsccn1|mKIAA0339|mNSC1","SET domain containing 1A","protein-coding"]
[1493,"chr17",56673174,56673959,"+",0,"NA","intron (NR_045519, intron 1 of 16)","CpG",341,"NM_027933",71810,"Mm.29608","NM_027933","ENSMUSG00000002372","Ranbp3","2610024N24Rik|AA408221","RAN binding protein 3","protein-coding"]
[2948,"chr7",59228372,59229583,"+",0,"NA","5' UTR (NM_173010, exon 1 of 9)","5' UTR (NM_173010, exon 1 of 9)",225,"NM_011668",22215,"Mm.9002","NM_011668","ENSMUSG00000025326","Ube3a","4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216","ubiquitin protein ligase E3A","protein-coding"]
[2397,"chr4",138250408,138251138,"+",0,"NA","intron (NM_001099631, intron 1 of 9)","CpG",362,"NM_001099631",230863,"Mm.482408","NM_001099631","ENSMUSG00000045349","Sh2d5","BC036961","SH2 domain containing 5","protein-coding"]
[974,"chr14",20347837,20348668,"+",0,"NA","promoter-TSS (NM_001024512)","promoter-TSS (NM_001024512)",90,"NM_001177633",105428,"Mm.206990","NM_172379","ENSMUSG00000039599","Fam149b","AA536717|AI428773|Fam149b1|mKIAA0974","family with sequence similarity 149, member B","protein-coding"]
[2629,"chr5",122707366,122708242,"+",0,"NA","intron (NM_001310720, intron 1 of 10)","CpG",260,"NM_001310718",18438,"Mm.290884","NM_011026","ENSMUSG00000029470","P2rx4","AI504491|AW555605|D5Ertd444e|P2X4","purinergic receptor P2X, ligand-gated ion channel 4","protein-coding"]
[1271,"chr16",17797165,17798784,"+",0,"NA","intron (NM_153790, intron 1 of 10)","CpG",692,"NM_153790",224024,"Mm.194950","NM_153790","ENSMUSG00000012017","Scarf2","AI194363|NSR1|SREC-II|SRECRP-1|Scarf1|Scatf1|Srec2|SrecII|W53987|W65560","scavenger receptor class F, member 2","protein-coding"]
[1668,"chr19",6937768,6938393,"+",0,"NA","TTS (NM_001177361)","TTS (NM_001177361)",3113,"NM_207220",107173,"Mm.276555","NM_207220","ENSMUSG00000024958","Gpr137","AI428855","G protein-coupled receptor 137","protein-coding"]
[1715,"chr19",29521991,29523252,"+",0,"NA","promoter-TSS (NR_015567)","promoter-TSS (NR_015567)",339,"NM_001081319",226089,"Mm.353838","NM_177641","ENSMUSG00000038658","Ric1","C030046E11Rik|C130057E09Rik|Kiaa1432","RAB6A GEF complex partner 1","protein-coding"]
[344,"chr10",111472834,111473530,"+",0,"NA","promoter-TSS (NM_015781)","promoter-TSS (NM_015781)",-10,"NM_015781",53605,"Mm.290407","NM_015781","ENSMUSG00000058799","Nap1l1","AA407126|AI256722|D10Ertd68e|NAP-1","nucleosome assembly protein 1-like 1","protein-coding"]
[1613,"chr18",77185308,77186131,"+",0,"NA","promoter-TSS (NM_153124)","promoter-TSS (NM_153124)",-128,"NM_153124",225742,"Mm.365178","NM_013666","ENSMUSG00000025425","St8sia5","ST8SiaV|Siat8e","ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5","protein-coding"]
[2103,"chr3",40949709,40950990,"+",0,"NA","promoter-TSS (NM_001040399)","promoter-TSS (NM_001040399)",-282,"NM_001040399",214048,"Mm.46782","NM_027663","ENSMUSG00000025762","Larp1b","1700108L22Rik|4933421B21Rik|AA690246|Larp2","La ribonucleoprotein domain family, member 1B","protein-coding"]
[2949,"chr7",62376958,62377833,"+",0,"NA","exon (NM_013779, exon 1 of 1)","exon (NM_013779, exon 1 of 1)",416,"NM_013779",27385,"Mm.45207","NM_013779","ENSMUSG00000056972","Magel2","Mage-l2|NDNL1|nM15|ns7","melanoma antigen, family L, 2","protein-coding"]
[636,"chr11",103966482,103967145,"+",0,"NA","promoter-TSS (NM_007477)","promoter-TSS (NM_007477)",-58,"NM_007477",11841,"Mm.5061","NM_007477","ENSMUSG00000062421","Arf2","-","ADP-ribosylation factor 2","protein-coding"]
[1710,"chr19",25505346,25506224,"+",0,"NA","promoter-TSS (NM_015826)","promoter-TSS (NM_015826)",79,"NM_015826",50796,"Mm.391208","NM_015826","ENSMUSG00000024837","Dmrt1","-","doublesex and mab-3 related transcription factor 1","protein-coding"]
[1406,"chr17",26715371,26716453,"+",0,"NA","intron (NM_029870, intron 1 of 8)","CpG",262,"NM_029870",77128,"Mm.275414","NM_029870","ENSMUSG00000048249","Crebrf","A930001N09Rik|LRF","CREB3 regulatory factor","protein-coding"]
[1104,"chr15",39659301,39659799,"+",0,"NA","promoter-TSS (NM_001256384)","promoter-TSS (NM_001256384)",39,"NM_001256384",116838,"Mm.309296","NM_053271",null,"Rims2","2810036I15Rik|AW048769|RIM2|Rab3ip2|Rim2(+40A)|Rim2(+44A)|Rim2(+4A)|Serg2|Syt3-rs|mKIAA0751","regulating synaptic membrane exocytosis 2","protein-coding"]
[2224,"chr3",157946878,157947522,"+",0,"NA","promoter-TSS (NM_001013806)","promoter-TSS (NM_001013806)",-266,"NM_001013806",433667,"Mm.265806","NM_001013806",null,"Ankrd13c","AI505652|AU022220","ankyrin repeat domain 13c","protein-coding"]
[1133,"chr15",76246732,76247684,"+",0,"NA","promoter-TSS (NR_105918)","promoter-TSS (NR_105918)",401,"NM_023168",66168,"Mm.41665","NM_023168","ENSMUSG00000022564","Grina","1110025J15Rik|Lag|Tmbim3","glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)","protein-coding"]
[2421,"chr4",148130237,148131297,"+",0,"NA","promoter-TSS (NM_027426)","promoter-TSS (NM_027426)",-69,"NM_027426",70433,"Mm.275288","NM_027426","ENSMUSG00000029005","Draxin","2610109H07Rik|neucrin","dorsal inhibitory axon guidance protein","protein-coding"]
[209,"chr10",40349076,40350173,"+",0,"NA","exon (NM_001168304, exon 1 of 13)","exon (NM_001168304, exon 1 of 13)",316,"NM_001291816",78334,"Mm.200924","NM_198164","ENSMUSG00000038481","Cdk19","2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028","cyclin-dependent kinase 19","protein-coding"]
[2837,"chr6",120363724,120364996,"+",0,"NA","promoter-TSS (NR_045558)","promoter-TSS (NR_045558)",9,"NR_045558",67200,"Mm.45767","NM_026028","ENSMUSG00000030177","Ccdc77","2400002C23Rik|2700091N06Rik|AV168274","coiled-coil domain containing 77","protein-coding"]
[1905,"chr2",74825694,74826454,"+",0,"NA","intron (NM_016804, intron 1 of 9)","CpG",262,"NM_016804",53375,"Mm.292613","NM_016804",null,"Mtx2","1500012G02Rik","metaxin 2","protein-coding"]
[3203,"chr8",85071575,85072181,"+",0,"NA","exon (NM_001039514, exon 1 of 9)","exon (NM_001039514, exon 1 of 9)",121,"NM_001039514",330817,"Mm.193086","NM_201408","ENSMUSG00000060038","Dhps","Dhs","deoxyhypusine synthase","protein-coding"]
[1118,"chr15",65787005,65787724,"+",0,"NA","intron (NM_133766, intron 1 of 22)","CpG",323,"NM_133766",76740,"Mm.260647","NM_133766","ENSMUSG00000015002","Efr3a","A130089M23Rik|BB071175|C76891|C920006C10Rik|D030063F01Rik|mKIAA0143","EFR3 homolog A (S. cerevisiae)","protein-coding"]
[1575,"chr18",49832539,49833272,"+",0,"NA","promoter-TSS (NM_001081371)","promoter-TSS (NM_001081371)",-92,"NM_001081371",240283,"Mm.257790","NM_001081371","ENSMUSG00000037416","Dmxl1","C630007L23Rik|D030030C22","Dmx-like 1","protein-coding"]
[117,"chr1",134405772,134406472,"+",0,"NA","intron (NM_028057, intron 1 of 8)","CpG",132,"NM_028057",72017,"Mm.280230","NM_028057","ENSMUSG00000026456","Cyb5r1","1500005G05Rik|B5R.1|C80155|Nqo3a2","cytochrome b5 reductase 1","protein-coding"]
[2428,"chr4",150087297,150088634,"+",0,"NA","exon (NM_177366, exon 1 of 4)","exon (NM_177366, exon 1 of 4)",462,"NM_177366",269604,"Mm.219307","NM_177366","ENSMUSG00000047875","Gpr157","F730108M23Rik","G protein-coupled receptor 157","protein-coding"]
[2207,"chr3",141464711,141465970,"+",0,"NA","promoter-TSS (NM_009472)","promoter-TSS (NM_009472)",-224,"NM_009472",22253,"Mm.24430","NM_009472","ENSMUSG00000059921","Unc5c","B130051O18Rik|Unc5h3|rcm","unc-5 homolog C (C. elegans)","protein-coding"]
[600,"chr11",98026908,98027456,"+",0,"NA","intron (NM_009078, intron 1 of 5)","CpG",258,"NM_009078",19921,"Mm.10247","NM_009078","ENSMUSG00000017404","Rpl19","-","ribosomal protein L19","protein-coding"]
[80,"chr1",90603237,90603904,"+",0,"NA","exon (NM_133805, exon 1 of 8)","exon (NM_133805, exon 1 of 8)",145,"NM_133805",108679,"Mm.119177","NM_133805","ENSMUSG00000034432","Cops8","9430009J09Rik|AA408242|Csn8|Sgn8","COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)","protein-coding"]
[336,"chr10",99107915,99108641,"+",0,"NA","5' UTR (NM_015737, exon 1 of 1)","5' UTR (NM_015737, exon 1 of 1)",143,"NM_015737",14426,"Mm.314","NM_015737","ENSMUSG00000090035","Galnt4","AV011803","UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4","protein-coding"]
[2472,"chr5",21424856,21425610,"+",0,"NA","promoter-TSS (NM_029195)","promoter-TSS (NM_029195)",330,"NM_177869",330050,"Mm.40655","NM_177869","ENSMUSG00000047221","Fam185a","4631428I10|AI847670","family with sequence similarity 185, member A","protein-coding"]
[457,"chr11",59947828,59948686,"+",0,"NA","promoter-TSS (NM_138675)","promoter-TSS (NM_138675)",43,"NM_138675",192191,"Mm.125288","NM_138675",null,"Med9","BC019367|Med25","mediator complex subunit 9","protein-coding"]
[1301,"chr16",32608670,32609458,"+",0,"NA","intron (NM_011638, intron 1 of 18)","CpG",168,"NM_011638",22042,"Mm.28683","NM_011638","ENSMUSG00000022797","Tfrc","2610028K12Rik|CD71|E430033M20Rik|Mtvr1|TFR|TFR1|TR|Trfr|p90","transferrin receptor","protein-coding"]
[821,"chr12",110277966,110279819,"+",0,"NA","promoter-TSS (NR_002866)","promoter-TSS (NR_002866)",-338,"NM_172119",107585,"Mm.154427","NM_172119","ENSMUSG00000075707","Dio3","-","deiodinase, iodothyronine type III","protein-coding"]
[696,"chr11",120457714,120458503,"+",0,"NA","promoter-TSS (NM_152807)","promoter-TSS (NM_152807)",-21,"NM_152807",67291,"Mm.103384","NM_152807","ENSMUSG00000049957","Ccdc137","3110023B02Rik","coiled-coil domain containing 137","protein-coding"]
[383,"chr11",5788075,5788763,"+",0,"NA","promoter-TSS (NM_001146309)","promoter-TSS (NM_001146309)",-64,"NM_001146309",13169,"Mm.256925","NM_013810","ENSMUSG00000020476","Dbnl","Abp1|SH3P7|mAbp1","drebrin-like","protein-coding"]
[2532,"chr5",63648903,63650476,"+",0,"NA","5' UTR (NM_177006, exon 1 of 7)","5' UTR (NM_177006, exon 1 of 7)",586,"NM_177006",319807,"Mm.319487","NM_028470","ENSMUSG00000090061","Nwd2","3110047P20Rik|B830017A01Rik|Hn1-ps2|mKIAA1239","NACHT and WD repeat domain containing 2","protein-coding"]
[1873,"chr2",38350811,38352016,"+",0,"NA","5' UTR (NM_010710, exon 1 of 5)","5' UTR (NM_010710, exon 1 of 5)",105,"NM_010710",16870,"Mm.142856","NM_010710","ENSMUSG00000000247","Lhx2","LH2A|Lh-2|Lim2|ap|apterous","LIM homeobox protein 2","protein-coding"]
[1721,"chr19",36834033,36834982,"+",0,"NA","5' UTR (NM_001163635, exon 1 of 27)","5' UTR (NM_001163635, exon 1 of 27)",275,"NM_001163635",74493,"Mm.249310","NM_001163635","ENSMUSG00000024811","Tnks2","5430432P15Rik|AA517131|AI662480|ARTD6|TNKS-2|Tank2","tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2","protein-coding"]
[2497,"chr5",31054610,31055324,"+",0,"NA","TTS (NM_027855)","TTS (NM_027855)",187,"NM_001289522",69719,"Mm.305535","NM_023525","ENSMUSG00000013629","Cad","2410008J01Rik|AU018859|Cpad","carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase","protein-coding"]
[3376,"chr9",54917082,54917615,"+",0,"NA","promoter-TSS (NM_177351)","promoter-TSS (NM_177351)",58,"NM_177351",235386,"Mm.259334","NM_177351","ENSMUSG00000035878","Hykk","Agphd1|C630028N24Rik","hydroxylysine kinase 1","protein-coding"]
[2179,"chr3",107895751,107896332,"+",0,"NA","non-coding (NR_015459, exon 1 of 3)","non-coding (NR_015459, exon 1 of 3)",172,"NR_015459",329735,"Mm.270500","NM_177858","ENSMUSG00000086968","4933431E20Rik","-","RIKEN cDNA 4933431E20 gene","ncRNA"]
[2172,"chr3",103808809,103809894,"+",0,"NA","promoter-TSS (NM_001163553)","promoter-TSS (NM_001163553)",36,"NM_133865",140917,"Mm.374850","NM_133865","ENSMUSG00000027845","Dclre1b","AI452214|Apollo|SNMIB|mSNM1B","DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae)","protein-coding"]
[1431,"chr17",31295887,31296868,"+",0,"NA","5' UTR (NM_001242427, exon 1 of 20)","5' UTR (NM_001242427, exon 1 of 20)",153,"NM_001242427",224674,"Mm.311395","NM_153062","ENSMUSG00000024036","Slc37a1","G3PP","solute carrier family 37 (glycerol-3-phosphate transporter), member 1","protein-coding"]
[92,"chr1",93342854,93344136,"+",0,"NA","promoter-TSS (NM_023200)","promoter-TSS (NM_023200)",-150,"NM_023200",66385,"Mm.88704","NM_023200",null,"Ppp1r7","2310014J01Rik|SDS22","protein phosphatase 1, regulatory (inhibitor) subunit 7","protein-coding"]
[1489,"chr17",56418722,56419844,"+",0,"NA","promoter-TSS (NR_105943)","promoter-TSS (NR_105943)",-374,"NR_105943",102465590,null,"NR_105943","ENSMUSG00000098339","Mir6977","Gm27922|mmu-mir-6977","microRNA 6977","ncRNA"]
[3050,"chr7",128004353,128005195,"+",0,"NA","exon (NM_001079932, exon 1 of 6)","exon (NM_001079932, exon 1 of 6)",396,"NM_001079932",434246,"Mm.389924","NM_001079932","ENSMUSG00000042828","Trim72","BC067209|MG53","tripartite motif-containing 72","protein-coding"]
[1212,"chr15",99074187,99075337,"+",0,"NA","promoter-TSS (NM_001162506)","promoter-TSS (NM_001162506)",-211,"NM_001162506",78733,"Mm.124905","NM_030159","ENSMUSG00000032783","Troap","AW476063|E130301L11Rik|tastin","trophinin associated protein","protein-coding"]
[2253,"chr4",42916565,42917720,"+",0,"NA","promoter-TSS (NM_172690)","promoter-TSS (NM_172690)",-109,"NM_172690",230085,"Mm.240965","NM_172690","ENSMUSG00000036062","Phf24","A230025O18|Kiaa1045|N28178|mKIAA1045","PHD finger protein 24","protein-coding"]
[2787,"chr6",84570657,84571459,"+",0,"NA","TTS (NM_175475)","TTS (NM_175475)",22752,"NM_175475",232174,"Mm.255246","NM_175475","ENSMUSG00000063415","Cyp26b1","CP26|P450RAI-2","cytochrome P450, family 26, subfamily b, polypeptide 1","protein-coding"]
[2433,"chr4",152026891,152028420,"+",0,"NA","promoter-TSS (NM_133879)","promoter-TSS (NM_133879)",16,"NM_133879",100090,"Mm.24661","NM_133879","ENSMUSG00000028952","Zbtb48","0610011D15Rik|AI327031|Hkr3","zinc finger and BTB domain containing 48","protein-coding"]
[1805,"chr2",25456491,25458103,"+",0,"NA","intron (NM_027085, intron 1 of 5)","intron (NM_027085, intron 1 of 5)",454,"NM_027085",69454,"Mm.44194","NM_027085","ENSMUSG00000015093","Clic3","2300003G24Rik","chloride intracellular channel 3","protein-coding"]
[3226,"chr8",95331251,95332713,"+",0,"NA","promoter-TSS (NM_133954)","promoter-TSS (NM_133954)",-32,"NM_024467",79233,"Mm.350514","NM_024467","ENSMUSG00000046556","Zfp319","AI225750|AI413472|Znf319|mKIAA1388","zinc finger protein 319","protein-coding"]
[1727,"chr19",40894390,40894968,"+",0,"NA","promoter-TSS (NM_028319)","promoter-TSS (NM_028319)",-24,"NR_106167",102466881,null,"NR_106167","ENSMUSG00000099118","Mir8092","Gm27407|mmu-mir-8092","microRNA 8092","ncRNA"]
[1477,"chr17",47687513,47688417,"+",0,"NA","TTS (NM_001290337)","TTS (NM_001290337)",355,"NR_045945",100415787,"Mm.392206","NR_045945","ENSMUSG00000084880","Tomm6os","Gm14872|OTTMUSG00000018355|Prickle4os","translocase of outer mitochondrial membrane 6, opposite strand","ncRNA"]
[1164,"chr15",79516047,79517351,"+",0,"NA","intron (NM_134090, intron 1 of 4)","CpG",291,"NM_134090",105785,"Mm.298199","NM_134090","ENSMUSG00000010830","Kdelr3","AI173274","KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3","protein-coding"]
[2922,"chr7",44816064,44816989,"+",0,"NA","promoter-TSS (NM_030693)","promoter-TSS (NM_030693)",132,"NR_033136",107503,"Mm.389890","NM_030693","ENSMUSG00000038539","Atf5","AFTA|Atf7|Atfx|ODA-10","activating transcription factor 5","protein-coding"]
[2824,"chr6",113604378,113605113,"+",0,"NA","promoter-TSS (NM_133937)","promoter-TSS (NM_133937)",-27,"NM_133937",101314,"Mm.485793","NM_133937","ENSMUSG00000033940","Brk1","6720456B07Rik|AW011779","BRICK1, SCAR/WAVE actin-nucleating complex subunit","protein-coding"]
[505,"chr11",72606948,72608216,"+",0,"NA","5' UTR (NM_025985, exon 1 of 6)","5' UTR (NM_025985, exon 1 of 6)",321,"NM_025985",67128,"Mm.458052","NM_025985","ENSMUSG00000020794","Ube2g1","2700059C12Rik|AI256795|AU014992|AW552068|D130023C12Rik","ubiquitin-conjugating enzyme E2G 1","protein-coding"]
[2739,"chr6",30047556,30048756,"+",0,"NA","intron (NM_001164228, intron 1 of 10)","CpG",168,"NM_001164226",18181,"Mm.259258","NM_010938","ENSMUSG00000058440","Nrf1","C87038|D6Ertd415e","nuclear respiratory factor 1","protein-coding"]
[670,"chr11",115974646,115976057,"+",0,"NA","intron (NM_001005608, intron 1 of 39)","intron (NM_001005608, intron 1 of 39)",626,"NM_133663",192897,"Mm.213873","NM_133663","ENSMUSG00000020758","Itgb4","AA407042|C230078O20|CD104","integrin beta 4","protein-coding"]
[1094,"chr15",31223945,31224781,"+",0,"NA","promoter-TSS (NM_146057)","promoter-TSS (NM_146057)",-22,"NM_146057",223453,"Mm.222867","NM_146057","ENSMUSG00000039168","Dap","4921531N22Rik|AI789753|AU040360","death-associated protein","protein-coding"]
[419,"chr11",49901553,49902442,"+",0,"NA","intron (NM_029004, intron 1 of 13)","CpG",162,"NM_029004",74563,"Mm.258798","NM_029004","ENSMUSG00000020374","Rasgef1c","9130006A14Rik","RasGEF domain family, member 1C","protein-coding"]
[2178,"chr3",107035748,107037230,"+",0,"NA","exon (NM_008418, exon 1 of 1)","exon (NM_008418, exon 1 of 1)",327,"NM_008418",16491,"Mm.30640","NM_008418","ENSMUSG00000047959","Kcna3","Kca1-3|Kv1.3|Mk-3","potassium voltage-gated channel, shaker-related subfamily, member 3","protein-coding"]
[995,"chr14",30951226,30951755,"+",0,"NA","5' UTR (NM_011849, exon 1 of 15)","5' UTR (NM_011849, exon 1 of 15)",113,"NM_011849",23955,"Mm.251494","NM_011849","ENSMUSG00000021918","Nek4","Stk2","NIMA (never in mitosis gene a)-related expressed kinase 4","protein-coding"]
[1225,"chr15",101284093,101284688,"+",0,"NA","promoter-TSS (NM_026566)","promoter-TSS (NM_026566)",89,"NM_026566",68118,"Mm.482360","NM_026566","ENSMUSG00000037204","Atg101","9430023L20Rik|AA407441|AU022967","autophagy related 101","protein-coding"]
[837,"chr12",112588758,112589684,"+",0,"NA","intron (NM_198411, intron 1 of 22)","intron (NM_198411, intron 1 of 22)",437,"NM_198411",70435,"Mm.250193","NM_198411","ENSMUSG00000037679","Inf2","2610204M08Rik|AA589465|AW125550|EG629699","inverted formin, FH2 and WH2 domain containing","protein-coding"]
[2909,"chr7",29983624,29984170,"+",0,"NA","promoter-TSS (NM_001033355)","promoter-TSS (NM_001033355)",-58,"NM_001167873",243905,"Mm.322432","NM_001033355","ENSMUSG00000074221","Zfp568","C80731|Gm1691|chato","zinc finger protein 568","protein-coding"]
[2015,"chr2",156613616,156614602,"+",0,"NA","promoter-TSS (NR_040372)","promoter-TSS (NR_040372)",412,"NM_001277186",228836,"Mm.22094","NM_146128","ENSMUSG00000061689","Dlgap4","AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16","discs, large homolog-associated protein 4 (Drosophila)","protein-coding"]
[290,"chr10",80355799,80357215,"+",0,"NA","promoter-TSS (NM_183152)","promoter-TSS (NM_183152)",48,"NM_183152",216166,"Mm.17613","NM_183152","ENSMUSG00000035486","Plk5","6330514A18Rik","polo-like kinase 5","protein-coding"]
[625,"chr11",102375518,102376181,"+",0,"NA","non-coding (NR_131196, exon 3 of 3)","non-coding (NR_131196, exon 3 of 3)",1171,"NR_131196",105463053,"Mm.403323","NR_131196",null,"Bloodlinc","Gm11616|OTTMUSG00000002784","Bloodlinc, erythroid developmental long intergenic non-protein coding transcript","ncRNA"]
[149,"chr1",167617984,167618616,"+",0,"NA","promoter-TSS (NM_001159731)","promoter-TSS (NM_001159731)",35,"NM_001159731",20183,"Mm.3475","NM_009107","ENSMUSG00000015843","Rxrg","Nr2b3","retinoid X receptor gamma","protein-coding"]
[3208,"chr8",87472435,87473557,"+",0,"NA","promoter-TSS (NM_019626)","promoter-TSS (NM_019626)",-120,"NR_125722",100040294,"Mm.213632","NR_033430","ENSMUSG00000097248","Gm2694","C230036H16Rik|linc1582","predicted gene 2694","ncRNA"]
[712,"chr11",121451735,121452282,"+",0,"NA","promoter-TSS (NM_029878)","promoter-TSS (NM_029878)",59,"NM_029878",108903,"Mm.23686","NM_029878","ENSMUSG00000039230","Tbcd","2310057L06Rik|A030005L14Rik|mKIAA0988","tubulin-specific chaperone d","protein-coding"]
[210,"chr10",40683006,40683766,"+",0,"NA","exon (NM_177793, exon 1 of 5)","exon (NM_177793, exon 1 of 5)",104,"NM_177793",327747,"Mm.80407","NM_177793","ENSMUSG00000045555","Mettl24","9030224M15Rik","methyltransferase like 24","protein-coding"]
[406,"chr11",32347265,32348115,"+",0,"NA","promoter-TSS (NM_177364)","promoter-TSS (NM_177364)",-121,"NM_177364",268396,"Mm.227616","NM_177364","ENSMUSG00000040711","Sh3pxd2b","G431001E03Rik|TSK4|fad49","SH3 and PX domains 2B","protein-coding"]
[3365,"chr9",48985329,48985909,"+",0,"NA","intron (NM_175482, intron 1 of 23)","CpG",234,"NM_175482",235323,"Mm.21630","NM_175482","ENSMUSG00000032267","Usp28","9830148O20Rik|AU022237|mKIAA1515","ubiquitin specific peptidase 28","protein-coding"]
[2560,"chr5",92897653,92898515,"+",0,"NA","promoter-TSS (NM_001077596)","promoter-TSS (NM_001077596)",91,"NM_001077596",27428,"Mm.46014","NM_015756","ENSMUSG00000029381","Shroom3","AL022960|D5Ertd287e|Shrm|Shrm3","shroom family member 3","protein-coding"]
[2289,"chr4",83417471,83418180,"+",0,"NA","promoter-TSS (NM_029949)","promoter-TSS (NM_029949)",81,"NM_029949",77634,"Mm.271985","NM_029949","ENSMUSG00000028483","Snapc3","1810020H02Rik|4930558A07Rik|5031401C21Rik|AI414457|E030018J20Rik","small nuclear RNA activating complex, polypeptide 3","protein-coding"]
[3283,"chr8",121116117,121117000,"+",0,"NA","5' UTR (NM_013519, exon 1 of 1)","5' UTR (NM_013519, exon 1 of 1)",387,"NM_013519",14234,"Mm.14092","NM_013519","ENSMUSG00000046714","Foxc2","Fkh14|Hfhbf3|MFH-1|Mfh1","forkhead box C2","protein-coding"]
[2312,"chr4",106910900,106912851,"+",0,"NA","exon (NM_023672, exon 1 of 18)","exon (NM_023672, exon 1 of 18)",405,"NM_023672",72475,"Mm.195635","NM_023672","ENSMUSG00000061887","Ssbp3","2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1","single-stranded DNA binding protein 3","protein-coding"]
[19,"chr1",37429638,37430752,"+",0,"NA","promoter-TSS (NM_026123)","promoter-TSS (NM_026123)",23,"NM_026123",67387,"Mm.27404","NM_026123","ENSMUSG00000026111","Unc50","1110002A21Rik|GMH1|UNCL|URP","unc-50 homolog (C. elegans)","protein-coding"]
[3096,"chr7",144860906,144861563,"+",0,"NA","promoter-TSS (NM_010202)","promoter-TSS (NM_010202)",-152,"NM_010202",14175,"Mm.4956","NM_010202","ENSMUSG00000050917","Fgf4","Fgf-4|Fgfk|Hst1|Hstf-1|KS3|hst|hst-1|kFGF","fibroblast growth factor 4","protein-coding"]
[2702,"chr5",142960020,142961382,"+",0,"NA","exon (NM_007984, exon 1 of 5)","exon (NM_007984, exon 1 of 5)",346,"NM_007984",14086,"Mm.289707","NM_007984","ENSMUSG00000029581","Fscn1","AI663989|Fan1|fascin-1","fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)","protein-coding"]
[1030,"chr14",55591634,55592505,"+",0,"NA","promoter-TSS (NM_001029855)","promoter-TSS (NM_001029855)",279,"NM_194346",268749,"Mm.23748","NM_194346","ENSMUSG00000047098","Rnf31","AL033293|BC031509|Flj10111|HOIP|Paul|mFLJ00217","ring finger protein 31","protein-coding"]
[365,"chr10",128058396,128059138,"+",0,"NA","promoter-TSS (NM_019766)","promoter-TSS (NM_019766)",-215,"NM_019766",56351,"Mm.305816","NM_019766","ENSMUSG00000071072","Ptges3","5730442A20Rik|Ptges|Tebp|cPGES|p23|sid3177","prostaglandin E synthase 3 (cytosolic)","protein-coding"]
[2730,"chr6",14901257,14901993,"+",0,"NA","5' UTR (NM_053242, exon 1 of 19)","5' UTR (NM_053242, exon 1 of 19)",276,"NM_053242",114142,"Mm.332919","NM_053242","ENSMUSG00000029563","Foxp2","2810043D05Rik|AI449000|CAG-16|D0Kist7","forkhead box P2","protein-coding"]
[763,"chr12",76324810,76325424,"+",0,"NA","intron (NM_001101471, intron 1 of 1)","CpG",226,"NM_001101471",238276,"Mm.311452","NM_001101471","ENSMUSG00000021057","Akap5","3526401B18Rik|AKAP 150|AKAP-5|AKAP150|BB098886|Gm258|P150","A kinase (PRKA) anchor protein 5","protein-coding"]
[3255,"chr8",109778392,109779059,"+",0,"NA","5' UTR (NM_001301211, exon 1 of 23)","5' UTR (NM_001301211, exon 1 of 23)",142,"NM_001301211",11765,"Mm.37210","NM_009677","ENSMUSG00000031731","Ap1g1","AA409002|AU041323|AW551707|Adtg|D8Ertd374e","adaptor protein complex AP-1, gamma 1 subunit","protein-coding"]
[3332,"chr9",22057619,22058505,"+",0,"NA","exon (NM_001310759, exon 4 of 9)","exon (NM_001310759, exon 4 of 9)",-6039,"NM_010487",15571,"Mm.390167","NM_010487","ENSMUSG00000003410","Elavl3","2600009P04Rik|Huc|PLE21|mHuC","ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)","protein-coding"]
[2593,"chr5",114100103,114101168,"+",0,"NA","intron (NM_001033202, intron 1 of 12)","CpG",302,"NM_001033202",100756,"Mm.240421","NM_001033202",null,"Usp30","6330590F17Rik|AI851327|D5Ertd483e","ubiquitin specific peptidase 30","protein-coding"]
[3196,"chr8",84415347,84416379,"+",0,"NA","exon (NM_001252059, exon 1 of 46)","exon (NM_001252059, exon 1 of 46)",499,"NM_001252061",12286,"Mm.334658","NM_007578","ENSMUSG00000034656","Cacna1a","APCA|BI|Caca1a|Cacnl1a4|Cav2.1|Ccha1a|EA2|FHM|HPCA|MHP|MHP1|SCA6|alpha1A|la|nmf352|rkr|smrl|tg","calcium channel, voltage-dependent, P/Q type, alpha 1A subunit","protein-coding"]
[2021,"chr2",157914197,157915084,"+",0,"NA","promoter-TSS (NM_198627)","promoter-TSS (NM_198627)",-13,"NM_198627",277432,"Mm.441156","NM_198627","ENSMUSG00000037843","Vstm2l","Gm691","V-set and transmembrane domain containing 2-like","protein-coding"]
[3430,"chr9",87021979,87022579,"+",0,"NA","intron (NM_024195, intron 1 of 15)","CpG",250,"NM_024195",266690,"Mm.30166","NM_024195","ENSMUSG00000032872","Cyb5r4","2810034J18Rik|B5+B5R|C79736|Cb5cb5r|Ncb5or|b5/b5r|b5b5r","cytochrome b5 reductase 4","protein-coding"]
[1895,"chr2",71528928,71529769,"+",0,"NA","promoter-TSS (NM_010053)","promoter-TSS (NM_010053)",-97,"NM_010053",13390,"Mm.475101","NM_010053","ENSMUSG00000041911","Dlx1","Dlx|Dlx-1","distal-less homeobox 1","protein-coding"]
[3318,"chr9",13827603,13828419,"+",0,"NA","promoter-TSS (NM_026665)","promoter-TSS (NM_026665)",284,"NM_176836",72826,"Mm.246174","NM_176836","ENSMUSG00000037808","Fam76b","2810485I05Rik|C78303","family with sequence similarity 76, member B","protein-coding"]
[2920,"chr7",44496164,44497142,"+",0,"NA","promoter-TSS (NM_197991)","promoter-TSS (NM_197991)",65,"NM_028169",75538,"Mm.258841","NM_028169","ENSMUSG00000051113","Fam71e1","0610007G24Rik|1700021N13Rik|1700021P22Rik|GARI-L5","family with sequence similarity 71, member E1","protein-coding"]
[2038,"chr2",164485806,164486576,"+",0,"NA","promoter-TSS (NM_026797)","promoter-TSS (NM_026797)",51,"NM_001048227",52840,"Mm.256927","NM_026797","ENSMUSG00000017734","Dbndd2","1110017A21Rik|2900022J10Rik|AU041050|AW048677|D2Bwg0891e|Nkip|R74724","dysbindin (dystrobrevin binding protein 1) domain containing 2","protein-coding"]
[570,"chr11",87592027,87593100,"+",0,"NA","intron (NM_133215, intron 1 of 18)","intron (NM_133215, intron 1 of 18)",346,"NM_133215",170749,"Mm.399376","NM_133215","ENSMUSG00000018401","Mtmr4","AA596759|ESTM44|FYVE-DSP2|ZFYVE11|mKIAA0647","myotubularin related protein 4","protein-coding"]
[3123,"chr8",15010693,15011709,"+",0,"NA","5' UTR (NM_029116, exon 1 of 2)","5' UTR (NM_029116, exon 1 of 2)",176,"NM_029116",74901,"Mm.46675","NM_029116","ENSMUSG00000055675","Kbtbd11","2900016B01Rik|4930465M17Rik|mKIAA0711","kelch repeat and BTB (POZ) domain containing 11","protein-coding"]
[1880,"chr2",50296334,50296956,"+",0,"NA","promoter-TSS (NR_040361)","promoter-TSS (NR_040361)",32,"NM_133839",109129,"Mm.29214","NM_133839","ENSMUSG00000026766","Mmadhc","2010311D03Rik|AI314967","methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria","protein-coding"]
[252,"chr10",75060850,75062367,"+",0,"NA","exon (NM_001081412, exon 1 of 23)","exon (NM_001081412, exon 1 of 23)",712,"NM_001081412",110279,"Mm.333722","NM_001081412","ENSMUSG00000009681","Bcr","5133400C09Rik|AI561783|AI853148|mKIAA3017","breakpoint cluster region","protein-coding"]
[3389,"chr9",58822007,58824469,"+",0,"NA","promoter-TSS (NM_001081192)","promoter-TSS (NM_001081192)",-274,"NM_001081192",330953,"Mm.151967","NM_001081192","ENSMUSG00000032338","Hcn4","Bcng3|Hcn3","hyperpolarization-activated, cyclic nucleotide-gated K+ 4","protein-coding"]
[1159,"chr15",79140806,79141560,"+",0,"NA","promoter-TSS (NM_027231)","promoter-TSS (NM_027231)",68,"NM_001310581",27660,"Mm.390827","NM_138581","ENSMUSG00000033029","1700088E04Rik","ESTJ0827E04","RIKEN cDNA 1700088E04 gene","protein-coding"]
[883,"chr13",46669164,46670287,"+",0,"NA","exon (NM_001033192, exon 1 of 5)","exon (NM_001033192, exon 1 of 5)",203,"NM_001033192",97863,"Mm.275934","NM_001033192","ENSMUSG00000069237","Fam8a1","C78339","family with sequence similarity 8, member A1","protein-coding"]
[2048,"chr2",166805475,166806353,"+",0,"NA","intron (NM_001085495, intron 1 of 38)","CpG",333,"NM_001085495",99371,"Mm.297192","NM_001085495","ENSMUSG00000074582","Arfgef2","AI463430|AW493672|BIG2|E230011G24Rik","ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)","protein-coding"]
[655,"chr11",114675360,114676320,"+",0,"NA","intron (NM_053273, intron 1 of 13)","CpG",372,"NM_053273",117160,"Mm.271934","NM_053273","ENSMUSG00000034714","Ttyh2","1110001A03Rik","tweety homolog 2 (Drosophila)","protein-coding"]
[3110,"chr8",11555012,11557249,"+",0,"NA","promoter-TSS (NM_011919)","promoter-TSS (NM_011919)",65,"NM_001302460",26356,"Mm.25709","NM_011919","ENSMUSG00000045969","Ing1","2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b","inhibitor of growth family, member 1","protein-coding"]
[421,"chr11",50130960,50131854,"+",0,"NA","promoter-TSS (NM_029745)","promoter-TSS (NM_029745)",47,"NM_029745",76795,"Mm.290975","NM_029745","ENSMUSG00000036644","Tbc1d9b","-","TBC1 domain family, member 9B","protein-coding"]
[1998,"chr2",152143244,152144193,"+",0,"NA","exon (NM_009328, exon 1 of 2)","exon (NM_009328, exon 1 of 2)",109,"NM_009328",21407,"Mm.3881","NM_009328","ENSMUSG00000068079","Tcf15","Meso1|bHLH-EC2","transcription factor 15","protein-coding"]
[2930,"chr7",45617196,45617851,"+",0,"NA","promoter-TSS (NM_001271981)","promoter-TSS (NM_001271981)",-83,"NM_001271981",14343,"Mm.56933","NM_008051","ENSMUSG00000008461","Fut1","-","fucosyltransferase 1","protein-coding"]
[2332,"chr4",122995863,122997117,"+",0,"NA","5' UTR (NM_008506, exon 1 of 2)","5' UTR (NM_008506, exon 1 of 2)",559,"NM_008506",16918,"Mm.1055","NM_008506","ENSMUSG00000028654","Mycl","AW536278|L-myc|Lmyc-1|Lmyc1|Mycl1|bHLHe38","v-myc myelocytomatosis viral oncogene homolog, lung carcinoma derived (avian)","protein-coding"]
[1367,"chr17",23660362,23661158,"+",0,"NA","intron (NM_153784, intron 1 of 9)","intron (NM_153784, intron 1 of 9)",237,"NM_153784",212733,"Mm.59997","NM_153784","ENSMUSG00000043782","Ccdc64b","BICDR-2","coiled-coil domain containing 64B","protein-coding"]
[271,"chr10",79754976,79755412,"+",0,"NA","promoter-TSS (NM_023304)","promoter-TSS (NM_023304)",75,"NM_023304",67112,"Mm.154211","NM_023304","ENSMUSG00000020327","Fgf22","2210414E06Rik|FGF-22","fibroblast growth factor 22","protein-coding"]
[1070,"chr14",103650183,103651129,"+",0,"NA","exon (NM_198014, exon 1 of 7)","exon (NM_198014, exon 1 of 7)",413,"NM_198014",105439,"Mm.27548","NM_198014","ENSMUSG00000055717","Slain1","9630044O09Rik|AA675320|AW742596","SLAIN motif family, member 1","protein-coding"]
[1024,"chr14",54685999,54686784,"+",0,"NA","5' UTR (NM_021437, exon 1 of 2)","5' UTR (NM_021437, exon 1 of 2)",220,"NM_021437",58248,"Mm.197509","NM_021437","ENSMUSG00000040822","1700123O20Rik","MNCb-2990","RIKEN cDNA 1700123O20 gene","protein-coding"]
[3174,"chr8",71591553,71593122,"+",0,"NA","exon (NM_025396, exon 1 of 5)","exon (NM_025396, exon 1 of 5)",153,"NM_001294269",66171,"Mm.282284","NM_025396","ENSMUSG00000031807","Pgls","1110030K05Rik|AI447866|Plgs","6-phosphogluconolactonase","protein-coding"]
[3117,"chr8",13287725,13288458,"+",0,"NA","promoter-TSS (NM_001042651)","promoter-TSS (NM_001042651)",35,"NM_001042651",102323,"Mm.368890","NM_001024504","ENSMUSG00000038506","Dcun1d2","AW495713|mFLJ10704","DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)","protein-coding"]
[2867,"chr7",3645024,3645862,"+",0,"NA","5' UTR (NM_146176, exon 1 of 18)","5' UTR (NM_146176, exon 1 of 18)",174,"NM_146176",232791,"Mm.358731","NM_146176","ENSMUSG00000035632","Cnot3","A930039N10Rik","CCR4-NOT transcription complex, subunit 3","protein-coding"]
[2871,"chr7",6439856,6440739,"+",0,"NA","exon (NM_177061, exon 1 of 1)","exon (NM_177061, exon 1 of 1)",395,"NM_177061",257882,"Mm.479489","NM_177061","ENSMUSG00000090824","Olfr1344","4930415J05Rik|MOR124-1","olfactory receptor 1344","protein-coding"]
[491,"chr11",69965040,69965769,"+",0,"NA","promoter-TSS (NM_016887)","promoter-TSS (NM_016887)",-17,"NM_016887",53624,"Mm.281896","NM_016887","ENSMUSG00000018569","Cldn7","-","claudin 7","protein-coding"]
[1863,"chr2",33564278,33565046,"+",0,"NA","exon (NM_010725, exon 8 of 8)","exon (NM_010725, exon 8 of 8)",75849,"NM_010725",16917,"Mm.39825","NM_010725","ENSMUSG00000038765","Lmx1b","LMX1.1|LMX1.2","LIM homeobox transcription factor 1 beta","protein-coding"]
[3275,"chr8",119612441,119613109,"+",0,"NA","promoter-TSS (NM_029428)","promoter-TSS (NM_029428)",28,"NM_029428",75773,"Mm.159566","NM_029428","ENSMUSG00000024266","Adad2","4930403J07Rik","adenosine deaminase domain containing 2","protein-coding"]
[2463,"chr4",156230009,156230732,"+",0,"NA","promoter-TSS (NR_106118)","promoter-TSS (NR_106118)",-255,"NR_106118",102466236,null,"NR_106118","ENSMUSG00000098954","Mir7658","Gm27345|mmu-mir-7658","microRNA 7658","ncRNA"]
[13,"chr1",24678429,24679050,"+",0,"NA","promoter-TSS (NM_001310483)","promoter-TSS (NM_001310483)",-179,"NM_001310483",68421,"Mm.336563","NM_026719","ENSMUSG00000073725","Lmbrd1","0910001K20Rik|AV347960","LMBR1 domain containing 1","protein-coding"]
[2493,"chr5",30869390,30870187,"+",0,"NA","exon (NM_144525, exon 1 of 17)","exon (NM_144525, exon 1 of 17)",141,"NM_144525",68796,"Mm.205169","NM_144525",null,"Tmem214","1110039B18Rik|4921530J21Rik|AI841294|AU018742|C76280","transmembrane protein 214","protein-coding"]
[105,"chr1",129272864,129273934,"+",0,"NA","promoter-TSS (NM_172485)","promoter-TSS (NM_172485)",95,"NM_172485",210417,"Mm.380518","NM_172485","ENSMUSG00000042581","Thsd7b","1700074E13Rik|B930082A18|D130067I03Rik","thrombospondin, type I, domain containing 7B","protein-coding"]
[1514,"chr17",83350533,83351552,"+",0,"NA","5' UTR (NM_001114361, exon 1 of 24)","5' UTR (NM_001114361, exon 1 of 24)",111,"NM_001114362",78798,"Mm.295565","NM_199466","ENSMUSG00000032624","Eml4","4930443C24Rik|AI644019","echinoderm microtubule associated protein like 4","protein-coding"]
[840,"chr12",112722125,112723343,"+",0,"NA","intron (NM_001024602, intron 1 of 18)","CpG",560,"NM_001024602",217882,"Mm.23689","NM_001024602","ENSMUSG00000072825","Cep170b","AI466840|AW555464|Kiaa0284|mKIAA0284","centrosomal protein 170B","protein-coding"]
[1647,"chr19",5636757,5638117,"+",0,"NA","promoter-TSS (NM_009045)","promoter-TSS (NM_009045)",-53,"NM_009045",19697,"Mm.249966","NM_009045","ENSMUSG00000024927","Rela","p65","v-rel reticuloendotheliosis viral oncogene homolog A (avian)","protein-coding"]
[597,"chr11",97449588,97450929,"+",0,"NA","promoter-TSS (NM_021493)","promoter-TSS (NM_021493)",98,"NM_021493",58996,"Mm.394118","NM_021493","ENSMUSG00000049807","Arhgap23","A330041B18Rik","Rho GTPase activating protein 23","protein-coding"]
[2380,"chr4",133574174,133575284,"+",0,"NA","promoter-TSS (NM_172876)","promoter-TSS (NM_172876)",-16,"NM_172876",242691,"Mm.40110","NM_172876","ENSMUSG00000028850","Gpatch3","D930035B09Rik|Gpatc3","G patch domain containing 3","protein-coding"]
[111,"chr1",132315826,132316619,"+",0,"NA","promoter-TSS (NM_028778)","promoter-TSS (NM_028778)",97,"NM_001195025",74137,"Mm.100666","NM_028778","ENSMUSG00000009772","Nuak2","1200013B22Rik|Omphk2|Snark|mKIAA0537","NUAK family, SNF1-like kinase, 2","protein-coding"]
[1411,"chr17",27654901,27655772,"+",0,"NA","promoter-TSS (NM_011861)","promoter-TSS (NM_011861)",-255,"NM_011861",23969,"Mm.4926","NM_011861","ENSMUSG00000040276","Pacsin1","A830061D09Rik|H74|mKIAA1379|syndapin","protein kinase C and casein kinase substrate in neurons 1","protein-coding"]
[408,"chr11",32642109,32643334,"+",0,"NA","5' UTR (NM_134015, exon 1 of 14)","5' UTR (NM_134015, exon 1 of 14)",166,"NM_001271347",103583,"Mm.28017","NM_134015","ENSMUSG00000020271","Fbxw11","2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS","F-box and WD-40 domain protein 11","protein-coding"]
[1480,"chr17",47737845,47739067,"+",0,"NA","intron (NM_001161723, intron 1 of 8)","CpG",525,"NM_001161723",21425,"Mm.2305","NM_011549","ENSMUSG00000023990","Tfeb","Tcfeb|bHLHe35","transcription factor EB","protein-coding"]
[3265,"chr8",116921064,116922047,"+",0,"NA","promoter-TSS (NM_028131)","promoter-TSS (NM_028131)",-119,"NM_026844",66531,"Mm.4011","NM_026844","ENSMUSG00000014633","Cmc2","1110046L09Rik|2310061C15Rik|DC13","COX assembly mitochondrial protein 2","protein-coding"]
[2777,"chr6",77242572,77243137,"+",0,"NA","5' UTR (NM_028880, exon 1 of 2)","5' UTR (NM_028880, exon 1 of 2)",137,"NM_028880",74342,"Mm.292568","NM_028880","ENSMUSG00000060780","Lrrtm1","4632401D06Rik|AW125451","leucine rich repeat transmembrane neuronal 1","protein-coding"]
[242,"chr10",63099985,63100709,"+",0,"NA","exon (NM_016864, exon 1 of 1)","exon (NM_016864, exon 1 of 1)",191,"NM_016864",53404,"Mm.228661","NM_016864","ENSMUSG00000036816","Atoh7","Math5|bHLHa13","atonal homolog 7 (Drosophila)","protein-coding"]
[559,"chr11",83942005,83942463,"+",0,"NA","exon (NM_030096, exon 1 of 15)","exon (NM_030096, exon 1 of 15)",144,"NM_030096",78394,"Mm.280544","NM_030096","ENSMUSG00000020677","Ddx52","2700029C06Rik|ROK1","DEAD (Asp-Glu-Ala-Asp) box polypeptide 52","protein-coding"]
[1588,"chr18",62323741,62324569,"+",0,"NA","promoter-TSS (NM_008313)","promoter-TSS (NM_008313)",-49,"NM_008313",15562,"Mm.20440","NM_008313","ENSMUSG00000026322","Htr4","5-HT-4|5-HT4|5-HT<4L>|5HTR4","5 hydroxytryptamine (serotonin) receptor 4","protein-coding"]
[32,"chr1",55052290,55053361,"+",0,"NA","promoter-TSS (NM_001039710)","promoter-TSS (NM_001039710)",55,"NM_001039710",67876,"Mm.281019","NM_026424","ENSMUSG00000025981","Coq10b","1500041J02Rik|1700030I21Rik|9530077A17Rik|AV002237|AW742641","coenzyme Q10 homolog B (S. cerevisiae)","protein-coding"]
[443,"chr11",55469553,55470249,"+",0,"NA","intron (NM_013716, intron 1 of 11)","CpG",149,"NM_013716",27041,"Mm.39631","NM_013716",null,"G3bp1","AI849976|B430204O07|C87777|G3bp|mKIAA4115","GTPase activating protein (SH3 domain) binding protein 1","protein-coding"]
[2234,"chr4",15265410,15265898,"+",0,"NA","promoter-TSS (NM_181401)","promoter-TSS (NM_181401)",-166,"NM_181401",100201,"Mm.394111","NM_181401","ENSMUSG00000043252","Tmem64","9630015D15Rik|AI790744|AV300874","transmembrane protein 64","protein-coding"]
[1795,"chr2",25254978,25256241,"+",0,"NA","promoter-TSS (NM_001252542)","promoter-TSS (NM_001252542)",170,"NM_177344",227615,"Mm.213925","NM_177344","ENSMUSG00000078201","Tmem203","C730025P13Rik|Hbebp1","transmembrane protein 203","protein-coding"]
[580,"chr11",90637601,90638743,"+",0,"NA","promoter-TSS (NM_199008)","promoter-TSS (NM_199008)",-12,"NM_199008",69802,"Mm.151940","NM_199008",null,"Cox11","2010004I09Rik","cytochrome c oxidase assembly protein 11","protein-coding"]
[2800,"chr6",89095595,89096195,"+",0,"NA","promoter-TSS (NM_175017)","promoter-TSS (NM_175017)",-220,"NM_175017",232217,"Mm.281744","NM_175017",null,"4933427D06Rik","-","RIKEN cDNA 4933427D06 gene","protein-coding"]
[2523,"chr5",38277179,38277833,"+",0,"NA","exon (NM_172709, exon 1 of 7)","exon (NM_172709, exon 1 of 7)",102,"NM_172709",21906,"Mm.204765","NM_172709","ENSMUSG00000051596","Otop1","A530025J20Rik|Otp1|tlt","otopetrin 1","protein-coding"]
[3519,"chrX",77510987,77511796,"+",0,"NA","intron (NM_020601, intron 1 of 15)","CpG",164,"NM_020601",21372,"Mm.258476","NM_020601","ENSMUSG00000025246","Tbl1x","5330429M20|Tbl1","transducin (beta)-like 1 X-linked","protein-coding"]
[3273,"chr8",119446138,119446974,"+",0,"NA","promoter-TSS (NM_054095)","promoter-TSS (NM_054095)",-163,"NM_054095",117148,"Mm.356184","NM_054095","ENSMUSG00000031837","Necab2","Efcbp2","N-terminal EF-hand calcium binding protein 2","protein-coding"]
[1257,"chr16",14163048,14163576,"+",0,"NA","promoter-TSS (NM_001114085)","promoter-TSS (NM_001114085)",37,"NM_001114085",67203,"Mm.24105","NM_023317","ENSMUSG00000022678","Nde1","2810027M15Rik|AU042936|AW822251|Nude|mNudE","nuclear distribution gene E homolog 1 (A nidulans)","protein-coding"]
[846,"chr12",113097529,113098386,"+",0,"NA","promoter-TSS (NM_054081)","promoter-TSS (NM_054081)",-321,"NM_054081",116870,"Mm.212577","NM_054081","ENSMUSG00000021144","Mta1","-","metastasis associated 1","protein-coding"]
[31,"chr1",54250565,54251178,"+",0,"NA","exon (NM_030025, exon 1 of 28)","exon (NM_030025, exon 1 of 28)",188,"NM_030025",78016,"Mm.67455","NM_030025","ENSMUSG00000025983","Ccdc150","4930511H11Rik","coiled-coil domain containing 150","protein-coding"]
[1689,"chr19",10182682,10183849,"+",0,"NA","intron (NM_146094, intron 1 of 11)","CpG",377,"NM_146094",76267,"Mm.30158","NM_146094","ENSMUSG00000010663","Fads1","0710001O03Rik|A930006B21Rik|AI317215|DSD","fatty acid desaturase 1","protein-coding"]
[3484,"chr9",113741161,113742170,"+",0,"NA","5' UTR (NM_001114347, exon 1 of 39)","5' UTR (NM_001114347, exon 1 of 39)",192,"NM_001114347",76499,"Mm.222272","NM_029633","ENSMUSG00000033392","Clasp2","1500004F14Rik|8030404L10Rik|C77448|CLASP2beta|mKIAA0627","CLIP associating protein 2","protein-coding"]
[2307,"chr4",103119129,103119872,"+",0,"NA","5' UTR (NM_001039081, exon 1 of 13)","5' UTR (NM_001039081, exon 1 of 13)",110,"NM_001039081",71148,"Mm.288721","NM_027696","ENSMUSG00000028522","Mier1","4933425I22Rik|5830411K19Rik|er1","mesoderm induction early response 1 homolog (Xenopus laevis","protein-coding"]
[1861,"chr2",32875733,32877113,"+",0,"NA","intron (NM_146119, intron 1 of 13)","CpG",289,"NM_146119",227737,"Mm.301646","NM_146119","ENSMUSG00000026796","Fam129b","9130404D14Rik","family with sequence similarity 129, member B","protein-coding"]
[2825,"chr6",113696781,113698038,"+",0,"NA","promoter-TSS (NM_001033463)","promoter-TSS (NM_001033463)",-90,"NM_001033463",381801,"Mm.333322","NM_001033463","ENSMUSG00000056952","Tatdn2","AI646012|mKIAA0218","TatD DNase domain containing 2","protein-coding"]
[2706,"chr5",143622215,143623146,"+",0,"NA","intron (NM_011182, intron 1 of 12)","CpG",233,"NM_011182",19159,"Mm.281003","NM_011182","ENSMUSG00000018001","Cyth3","AI648983|ARNO3|CLM3|Grp1|Pscd3","cytohesin 3","protein-coding"]
[3312,"chr8",126298388,126299095,"+",0,"NA","5' UTR (NM_175434, exon 1 of 7)","5' UTR (NM_175434, exon 1 of 7)",162,"NM_175434",210027,"Mm.405238","NM_175434","ENSMUSG00000057060","Slc35f3","B230375D17Rik","solute carrier family 35, member F3","protein-coding"]
[1296,"chr16",32099027,32100103,"+",0,"NA","promoter-TSS (NM_025892)","promoter-TSS (NM_025892)",162,"NM_001111025",72084,"Mm.37613","NM_024464","ENSMUSG00000023791","Pigx","2010319C14Rik|PIG-X","phosphatidylinositol glycan anchor biosynthesis, class X","protein-coding"]
[3415,"chr9",72985184,72985878,"+",0,"NA","promoter-TSS (NM_028181)","promoter-TSS (NM_028181)",27,"NM_028181",72278,"Mm.268475","NM_028181","ENSMUSG00000034563","Ccpg1","1700030B06Rik|1810073J13Rik|9430028F23Rik|AI426686|AI875170|CPR8|D9Ertd392e","cell cycle progression 1","protein-coding"]
[1553,"chr18",33794550,33795285,"+",0,"NA","promoter-TSS (NR_038152)","promoter-TSS (NR_038152)",25,"NR_038151",69749,"Mm.248787","NR_038151","ENSMUSG00000087590","Epb41l4aos","2410004N09Rik|Epb4.1l4aos","erythrocyte membrane protein band 4.1 like 4a, opposite strand","ncRNA"]
[2161,"chr3",96696687,96697388,"+",0,"NA","promoter-TSS (NM_001165949)","promoter-TSS (NM_001165949)",-39,"NM_001165949",229615,"Mm.1635","NM_018812","ENSMUSG00000028101","Pias3","Pias3l","protein inhibitor of activated STAT 3","protein-coding"]
[2897,"chr7",27653741,27654467,"+",0,"NA","exon (NM_028417, exon 1 of 3)","exon (NM_028417, exon 1 of 3)",180,"NM_028417",73032,"Mm.44095","NM_028417","ENSMUSG00000007944","Ttc9b","2900074C18Rik","tetratricopeptide repeat domain 9B","protein-coding"]
[3336,"chr9",25251744,25252810,"+",0,"NA","promoter-TSS (NM_009859)","promoter-TSS (NM_009859)",-162,"NM_009859",235072,"Mm.270259","NM_009859","ENSMUSG00000001833","2007-09-01","Cdc10|E430034N22","septin 7","protein-coding"]
[1303,"chr16",32877316,32877981,"+",0,"NA","promoter-TSS (NM_027226)","promoter-TSS (NM_027226)",-136,"NM_027226",69823,"Mm.12831","NM_027226","ENSMUSG00000022800","Fyttd1","2010005M05Rik|3830411L18Rik|3830421F13Rik|4933423A17Rik|AI098218|AW539567|C85190","forty-two-three domain containing 1","protein-coding"]
[2133,"chr3",87525311,87526130,"+",0,"NA","5' UTR (NM_001286844, exon 1 of 5)","5' UTR (NM_001286844, exon 1 of 5)",142,"NM_012051",27049,"Mm.219460","NM_012051","ENSMUSG00000003382","Etv3","AI414410|METS|Pe1","ets variant 3","protein-coding"]
[1654,"chr19",6061107,6062445,"+",0,"NA","exon (NM_013859, exon 1 of 1)","exon (NM_013859, exon 1 of 1)",569,"NM_013859",29805,"Mm.2310","NM_013859","ENSMUSG00000075227","Znhit2","C11orf5|Fon|ORF6|Znhit2-ps","zinc finger, HIT domain containing 2","protein-coding"]
[968,"chr14",12284069,12284789,"+",0,"NA","intron (NM_001284384, intron 1 of 4)","CpG",226,"NM_001284386",218734,"Mm.44068","NM_146051","ENSMUSG00000033111","3830406C13Rik","-","RIKEN cDNA 3830406C13 gene","protein-coding"]
[3494,"chr9",120110306,120110955,"+",0,"NA","intron (NM_144793, intron 1 of 6)","CpG",231,"NM_144793",208638,"Mm.236656","NM_144793","ENSMUSG00000032519","Slc25a38","AV019094|BC010801","solute carrier family 25, member 38","protein-coding"]
[675,"chr11",116852059,116854114,"+",0,"NA","promoter-TSS (NM_178620)","promoter-TSS (NM_178620)",8,"NM_011358",20382,"Mm.21841","NM_011358","ENSMUSG00000034120","Srsf2","D11Wsu175e|MRF-1|Pr264|SC35|Sfrs10|Sfrs2","serine/arginine-rich splicing factor 2","protein-coding"]
[3510,"chr9",123529668,123530312,"+",0,"NA","intron (NM_030692, intron 1 of 19)","CpG",108,"NM_030692",83493,"Mm.273671","NM_030692","ENSMUSG00000025240","Sacm1l","SAC1|Sac1p|mKIAA0851","SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae)","protein-coding"]
[15,"chr1",36068010,36069141,"+",0,"NA","5' UTR (NM_015818, exon 1 of 2)","5' UTR (NM_015818, exon 1 of 2)",175,"NM_015818",50785,"Mm.213566","NM_015818","ENSMUSG00000045216","Hs6st1","6Ost1","heparan sulfate 6-O-sulfotransferase 1","protein-coding"]
[3268,"chr8",117256825,117257686,"+",0,"NA","exon (NM_001163262, exon 1 of 21)","exon (NM_001163262, exon 1 of 21)",236,"NM_001163262",74440,"Mm.233181","NM_028941","ENSMUSG00000034390","Cmip","4933407C03Rik|5830471E12Rik|AI314065|AI464126","c-Maf inducing protein","protein-coding"]
[431,"chr11",52396335,52396914,"+",0,"NA","intron (NM_153117, intron 1 of 2)","CpG",196,"NM_153117",213673,"Mm.291979","NM_153117","ENSMUSG00000036275","9530068E07Rik","C85061|Kct2","RIKEN cDNA 9530068E07 gene","protein-coding"]
[3016,"chr7",112427654,112428568,"+",0,"NA","intron (NM_020606, intron 1 of 12)","CpG",405,"NM_020606",57342,"Mm.143763","NM_020606","ENSMUSG00000030770","Parva","2010012A22Rik|5430400F08Rik|AI225929|AU042898|Actp|CH-ILKBP|Parvin","parvin, alpha","protein-coding"]
[382,"chr11",5761872,5762528,"+",0,"NA","promoter-TSS (NR_015577)","promoter-TSS (NR_015577)",50,"NR_015577",76508,"Mm.260203","NR_015577","ENSMUSG00000083844","Ube2d-ps","1600028I17Rik|2210015D19Rik|AI596465","ubiquitin-conjugating enzyme E2D, pseudogene","ncRNA"]
[3487,"chr9",118039978,118041071,"+",0,"NA","promoter-TSS (NM_001286508)","promoter-TSS (NM_001286508)",2,"NM_013727",27215,"Mm.92705","NM_013727","ENSMUSG00000039285","Azi2","AA410145|AZ2","5-azacytidine induced gene 2","protein-coding"]
[2236,"chr4",20008201,20008832,"+",0,"NA","promoter-TSS (NM_015767)","promoter-TSS (NM_015767)",88,"NM_015767",50500,"Mm.24375","NM_015767","ENSMUSG00000073988","Ttpa","alpha-TTP","tocopherol (alpha) transfer protein","protein-coding"]
[2846,"chr6",124808723,124809574,"+",0,"NA","intron (NM_013539, intron 1 of 2)","intron (NM_013539, intron 1 of 2)",230,"NM_001306053",14794,"Mm.261906","NM_013539","ENSMUSG00000038451","Spsb2","AI461677|C9|Grcc9|SSB2","splA/ryanodine receptor domain and SOCS box containing 2","protein-coding"]
[1506,"chr17",73107725,73108633,"+",0,"NA","intron (NM_001081071, intron 1 of 5)","CpG",194,"NM_001177967",225010,"Mm.329194","NM_001081071","ENSMUSG00000054469","Lclat1","AI181996|Agpat8|Alcat1|Gm91|Lycat","lysocardiolipin acyltransferase 1","protein-coding"]
[2855,"chr6",134919786,134920495,"+",0,"NA","promoter-TSS (NM_009875)","promoter-TSS (NM_009875)",-261,"NM_009875",12576,"Mm.2958","NM_009875","ENSMUSG00000003031","Cdkn1b","AA408329|AI843786|Kip1|p27|p27Kip1","cyclin-dependent kinase inhibitor 1B","protein-coding"]
[139,"chr1",156036034,156036755,"+",0,"NA","promoter-TSS (NM_144791)","promoter-TSS (NM_144791)",86,"NM_144791",208263,"Mm.211654","NM_144791","ENSMUSG00000026466","Tor1aip1","LAP1|Lap1B","torsin A interacting protein 1","protein-coding"]
[129,"chr1",139454565,139455551,"+",0,"NA","exon (NM_009791, exon 1 of 28)","exon (NM_009791, exon 1 of 28)",285,"NM_009791",12316,"Mm.168523","NM_009791","ENSMUSG00000033952","Aspm","Calmbp1|D330028K02Rik|MCPH5|Sha1","asp (abnormal spindle)-like, microcephaly associated (Drosophila)","protein-coding"]
[3008,"chr7",107370242,107371809,"+",0,"NA","exon (NM_021889, exon 1 of 7)","exon (NM_021889, exon 1 of 7)",235,"NM_021889",60510,"Mm.302793","NM_021889","ENSMUSG00000062542","Syt9","-","synaptotagmin IX","protein-coding"]
[926,"chr13",73763042,73764677,"+",0,"NA","exon (NM_011390, exon 1 of 24)","exon (NM_011390, exon 1 of 24)",162,"NM_011390",20499,"Mm.275800","NM_011390","ENSMUSG00000017756","Slc12a7","AA408796|D13Ertd261e|Kcc4","solute carrier family 12, member 7","protein-coding"]
[2145,"chr3",89209069,89210058,"+",0,"NA","TTS (NM_001077411)","TTS (NM_001077411)",4772,"NM_001161824",17827,"Mm.280943","NM_013604","ENSMUSG00000064068","Mtx1","Gcap6|Mtx","metaxin 1","protein-coding"]
[1246,"chr16",10791278,10792277,"+",0,"NA","promoter-TSS (NM_013638)","promoter-TSS (NM_013638)",328,"NM_008933",19119,"Mm.325769","NM_008933","ENSMUSG00000038015","Prm2","AI528784|Prm-2","protamine 2","protein-coding"]
[859,"chr13",20090428,20091615,"+",0,"NA","intron (NM_080288, intron 1 of 21)","CpG",514,"NM_080288",140580,"Mm.342392","NM_080288","ENSMUSG00000041112","Elmo1","6330578D22Rik|C230095H21Rik|CED-12","engulfment and cell motility 1","protein-coding"]
[1083,"chr15",7129098,7129932,"+",0,"NA","promoter-TSS (NM_001113386)","promoter-TSS (NM_001113386)",-57,"NM_001113386",16880,"Mm.149720","NM_013584","ENSMUSG00000054263","Lifr","A230075M04Rik|AW061234|LIF","leukemia inhibitory factor receptor","protein-coding"]
[739,"chr12",31654507,31655203,"+",0,"NA","promoter-TSS (NM_028002)","promoter-TSS (NM_028002)",-14,"NM_001163126",238123,"Mm.173068","NM_001163126","ENSMUSG00000035933","Cog5","5430405C01Rik|C87247|D18362|GOLTC1|GTC90","component of oligomeric golgi complex 5","protein-coding"]
[1293,"chr16",31428578,31429793,"+",0,"NA","intron (NM_001122683, intron 1 of 6)","CpG",432,"NM_001122683",71911,"Mm.293470","NM_175177","ENSMUSG00000046598","Bdh1","2310032J20Rik|AI327223|Bdh","3-hydroxybutyrate dehydrogenase, type 1","protein-coding"]
[876,"chr13",42051978,42052914,"+",0,"NA","intron (NM_007772, intron 1 of 8)","CpG",425,"NM_007772",110521,"Mm.4808","NM_007772","ENSMUSG00000021366","Hivep1","Cryabp1","human immunodeficiency virus type I enhancer binding protein 1","protein-coding"]
[3024,"chr7",119793794,119794632,"+",0,"NA","promoter-TSS (NM_001004187)","promoter-TSS (NM_001004187)",26,"NM_001004187",434234,"Mm.38237","NM_028129","ENSMUSG00000030924","2610020H08Rik","-","RIKEN cDNA 2610020H08 gene","protein-coding"]
[1792,"chr2",24949299,24950558,"+",0,"NA","promoter-TSS (NM_147179)","promoter-TSS (NM_147179)",151,"NM_026021",67187,"Mm.296106","NM_026021",null,"Zmynd19","2700064H14Rik|AA536891|AU014915|mizip","zinc finger, MYND domain containing 19","protein-coding"]
[2890,"chr7",25077036,25077710,"+",0,"NA","5' UTR (NM_175477, exon 1 of 2)","5' UTR (NM_175477, exon 1 of 2)",127,"NM_175477",232976,"Mm.41568","NM_175477","ENSMUSG00000045252","Zfp574","A630056B21Rik|Znf574","zinc finger protein 574","protein-coding"]
[662,"chr11",115403576,115404244,"+",0,"NA","intron (NM_026729, intron 1 of 5)","CpG",144,"NM_026729",68572,"Mm.271062","NM_026729","ENSMUSG00000018858","Ict1","1110001A02Rik|1110002E03Rik|MRP-L58","immature colon carcinoma transcript 1","protein-coding"]
[168,"chr1",182408593,182409649,"+",0,"NA","promoter-TSS (NM_173378)","promoter-TSS (NM_173378)",-46,"NM_173378",209456,"Mm.287450","NM_173378","ENSMUSG00000026510","Trp53bp2","53BP2|AI746547|ASPP2|PPP1R13A|Tp53bp2|X98550","transformation related protein 53 binding protein 2","protein-coding"]
[135,"chr1",152765859,152766685,"+",0,"NA","promoter-TSS (NM_026369)","promoter-TSS (NM_026369)",-270,"NM_026369",67771,"Mm.288974","NM_026369","ENSMUSG00000008475","Arpc5","5830443F10Rik|p16-Arc","actin related protein 2/3 complex, subunit 5","protein-coding"]
[3344,"chr9",40269012,40269905,"+",0,"NA","5' UTR (NM_178227, exon 1 of 6)","5' UTR (NM_178227, exon 1 of 6)",242,"NM_178227",235281,"Mm.290083","NM_153522","ENSMUSG00000049281","Scn3b","1110001K16Rik|4833414B02Rik|Scnb3","sodium channel, voltage-gated, type III, beta","protein-coding"]
[1518,"chr17",86167763,86169113,"+",0,"NA","5' UTR (NM_011104, exon 1 of 15)","5' UTR (NM_011104, exon 1 of 15)",653,"NM_011104",18754,"Mm.24614","NM_011104","ENSMUSG00000045038","Prkce","5830406C15Rik|PKC[e]|PKCepsilon|Pkce|R75156","protein kinase C, epsilon","protein-coding"]
[145,"chr1",163929738,163930563,"+",0,"NA","5' UTR (NM_028776, exon 1 of 14)","5' UTR (NM_028776, exon 1 of 14)",385,"NM_028776",240880,"Mm.389213","NM_028776","ENSMUSG00000026584","Scyl3","1200016D23Rik|6030457O16|AW214499|Pace1","SCY1-like 3 (S. cerevisiae)","protein-coding"]
[3447,"chr9",103304837,103305734,"+",0,"NA","promoter-TSS (NM_176979)","promoter-TSS (NM_176979)",-42,"NM_176979",235559,"Mm.259893","NM_176979","ENSMUSG00000032555","Topbp1","1110031N14Rik|2810429C13Rik|AI256758|D430026L04Rik|mKIAA0259","topoisomerase (DNA) II binding protein 1","protein-coding"]
[3444,"chr9",102834714,102835449,"+",0,"NA","exon (NM_013649, exon 1 of 15)","exon (NM_013649, exon 1 of 15)",161,"NM_001042607",20187,"Mm.335391","NM_013649","ENSMUSG00000032547","Ryk","AW536699|ERK-3|Vik","receptor-like tyrosine kinase","protein-coding"]
[178,"chr1",191906743,191907876,"+",0,"NA","exon (NM_009579, exon 1 of 2)","exon (NM_009579, exon 1 of 2)",218,"NR_030669",98736,"Mm.379232","NM_001024489","ENSMUSG00000055833","1700034H15Rik","4930557M11Rik|BB016121","RIKEN cDNA 1700034H15 gene","ncRNA"]
[2674,"chr5",137314181,137315883,"+",0,"NA","promoter-TSS (NM_011639)","promoter-TSS (NM_011639)",-791,"NM_011639",22051,"Mm.27063","NM_011639","ENSMUSG00000023348","Trip6","-","thyroid hormone receptor interactor 6","protein-coding"]
[1131,"chr15",75992871,75994020,"+",0,"NA","promoter-TSS (NM_177922)","promoter-TSS (NM_177922)",-324,"NM_177922",332110,"Mm.40843","NM_177922","ENSMUSG00000063704","Mapk15","BC048082","mitogen-activated protein kinase 15","protein-coding"]
[3156,"chr8",69791057,69791782,"+",0,"NA","exon (NM_133224, exon 1 of 26)","exon (NM_133224, exon 1 of 26)",256,"NM_133224",170759,"Mm.186066","NM_133224","ENSMUSG00000031862","Atp13a1","Atp13a|Cgi152|catp","ATPase type 13A1","protein-coding"]
[2728,"chr6",7844425,7845249,"+",0,"NA","promoter-TSS (NM_052993)","promoter-TSS (NM_052993)",-387,"NM_052993",94192,"Mm.102752","NM_052993",null,"C1galt1","2210410E06Rik|AV284120|T-synthase","core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1","protein-coding"]
[3439,"chr9",99243126,99243896,"+",0,"NA","promoter-TSS (NM_023873)","promoter-TSS (NM_023873)",43,"NM_023873",68121,"Mm.288739","NM_023873","ENSMUSG00000056267","Cep70","6720484E09Rik|Bite|C030018L16Rik","centrosomal protein 70","protein-coding"]
[1876,"chr2",39007824,39008483,"+",0,"NA","promoter-TSS (NM_028809)","promoter-TSS (NM_028809)",14,"NM_028809",74192,"Mm.38155","NM_028809","ENSMUSG00000026755","Arpc5l","2010015J01Rik|AI852867|ARC16-2|AW555592|AW742746","actin related protein 2/3 complex, subunit 5-like","protein-coding"]
[124,"chr1",136050419,136051047,"+",0,"NA","promoter-TSS (NM_001270609)","promoter-TSS (NM_001270609)",-71,"NM_001270609",226439,"Mm.491831","NM_001270609","ENSMUSG00000097918","Ascl5","Ascl5-ps|Gm197|bHLHa47","achaete-scute complex homolog 5 (Drosophila)","protein-coding"]
[772,"chr12",81026676,81027288,"+",0,"NA","5' UTR (NM_022316, exon 1 of 13)","5' UTR (NM_022316, exon 1 of 13)",174,"NM_022316",64075,"Mm.273295","NM_022316","ENSMUSG00000021136","Smoc1","2600002F22Rik|AI848508|SRG","SPARC related modular calcium binding 1","protein-coding"]
[1759,"chr19",53676648,53677613,"+",0,"NA","promoter-TSS (NM_001170847)","promoter-TSS (NM_001170847)",-176,"NM_001170847",73713,"Mm.313695","NM_001170847","ENSMUSG00000043639","Rbm20","1110018J23Rik|2010003H22Rik|AI646761","RNA binding motif protein 20","protein-coding"]
[1429,"chr17",31057445,31058311,"+",0,"NA","intron (NM_009593, intron 1 of 14)","CpG",184,"NM_009593",11307,"Mm.15691","NM_009593",null,"Abcg1","AW413978|Abc8|White","ATP-binding cassette, sub-family G (WHITE), member 1","protein-coding"]
[1974,"chr2",130273981,130274903,"+",0,"NA","promoter-TSS (NM_024193)","promoter-TSS (NM_024193)",30,"NM_024193",67134,"Mm.29363","NM_024193","ENSMUSG00000027405","Nop56","2310044F10Rik|Nol5a","NOP56 ribonucleoprotein","protein-coding"]
[2032,"chr2",162943037,162943851,"+",0,"NA","promoter-TSS (NM_001081338)","promoter-TSS (NM_001081338)",-21,"NM_001081338",241764,"Mm.187086","NM_001081338","ENSMUSG00000035576","L3mbtl1","C630004G01|L3mbtl|mKIAA0681","l(3)mbt-like (Drosophila)","protein-coding"]
[2536,"chr5",64969852,64970691,"+",0,"NA","promoter-TSS (NR_030577)","promoter-TSS (NR_030577)",-47,"NR_030577",100124451,null,"NR_030577","ENSMUSG00000077042","Mir574","Mirn574|mir-574|mmu-mir-574","microRNA 574","ncRNA"]
[2483,"chr5",25759813,25760647,"+",0,"NA","intron (NM_001310504, intron 1 of 10)","CpG",257,"NM_001004365",242894,"Mm.150319","NM_001004365","ENSMUSG00000056367","Actr3b","9630005C02|ARP11|AW047569|Arp3b|Arp3beta","ARP3 actin-related protein 3B","protein-coding"]
[3026,"chr7",120634732,120635695,"+",0,"NA","promoter-TSS (NM_025899)","promoter-TSS (NM_025899)",24,"NM_025899",67003,"Mm.334206","NM_025899","ENSMUSG00000030884","Uqcrc2","1500004O06Rik","ubiquinol cytochrome c reductase core protein 2","protein-coding"]
[1374,"chr17",24426363,24427082,"+",0,"NA","promoter-TSS (NM_010023)","promoter-TSS (NM_010023)",39,"NM_010023",13177,"Mm.291743","NM_010023","ENSMUSG00000024132","Eci1","Dci|eci","enoyl-Coenzyme A delta isomerase 1","protein-coding"]
[1528,"chr18",9957792,9958629,"+",0,"NA","promoter-TSS (NM_153552)","promoter-TSS (NM_153552)",30,"NM_153552",225160,"Mm.219648","NM_153552","ENSMUSG00000024287","Thoc1","3110002N20Rik|AW107452|NMP-84","THO complex 1","protein-coding"]
[2807,"chr6",91684005,91684753,"+",0,"NA","intron (NM_009320, intron 1 of 14)","CpG",312,"NM_009320",21366,"Mm.395650","NM_009320","ENSMUSG00000030096","Slc6a6","AA589629|C80501|Taut","solute carrier family 6 (neurotransmitter transporter, taurine), member 6","protein-coding"]
[2303,"chr4",100776652,100778054,"+",0,"NA","exon (NM_198037, exon 1 of 27)","exon (NM_198037, exon 1 of 27)",674,"NM_198037",320508,"Mm.151962","NM_198037","ENSMUSG00000028532","Cachd1","1190007F10Rik|AI852726|B430218L07Rik|Vwcd1|mKIAA1573","cache domain containing 1","protein-coding"]
[653,"chr11",113618663,113620062,"+",0,"NA","promoter-TSS (NM_009217)","promoter-TSS (NM_009217)",-119,"NM_009217",20606,null,"NM_009217","ENSMUSG00000047904","Sstr2","SRIF-1|SS2R|SSTR-2|Smstr-2|Smstr2|sst2","somatostatin receptor 2","protein-coding"]
[1692,"chr19",10634100,10635482,"+",0,"NA","intron (NM_027913, intron 1 of 19)","intron (NM_027913, intron 1 of 19)",558,"NM_027913",71768,"Mm.169261","NM_027913","ENSMUSG00000043789","Vwce","1300015B04Rik","von Willebrand factor C and EGF domains","protein-coding"]
[2677,"chr5",137641030,137642276,"+",0,"NA","TTS (NM_001168652)","TTS (NM_001168652)",180,"NM_001081962",751865,"Mm.200763","NM_001081962","ENSMUSG00000079165","Sap25","-","sin3 associated polypeptide","protein-coding"]
[2259,"chr4",43631906,43632874,"+",0,"NA","exon (NM_173788, exon 1 of 22)","exon (NM_173788, exon 1 of 22)",455,"NM_173788",230103,"Mm.103477","NM_173788","ENSMUSG00000028469","Npr2","GC-B|GC-B2|GC-B3|cn|mNPR-B|pwe","natriuretic peptide receptor 2","protein-coding"]
[3064,"chr7",135410291,135410930,"+",0,"NA","exon (NM_183193, exon 1 of 2)","exon (NM_183193, exon 1 of 2)",243,"NM_183193",270004,"Mm.132547","NM_183193","ENSMUSG00000048377","Foxi2","B130055A05Rik","forkhead box I2","protein-coding"]
[509,"chr11",73047796,73048633,"+",0,"NA","intron (NM_025818, intron 1 of 12)","CpG",347,"NM_025818",66874,"Mm.41903","NM_025818",null,"Ncbp3","1200014J11Rik|C130061O14Rik|C78393","nuclear cap binding subunit 3","protein-coding"]
[2212,"chr3",145937909,145938557,"+",0,"NA","exon (NM_025555, exon 1 of 3)","exon (NM_025555, exon 1 of 3)",201,"NM_025555",66421,"Mm.25137","NM_025555",null,"2410004B18Rik","4930572C24Rik","RIKEN cDNA 2410004B18 gene","protein-coding"]
[1015,"chr14",46882925,46883859,"+",0,"NA","intron (NM_001037221, intron 1 of 12)","CpG",427,"NM_001037221",74480,"Mm.214454","NM_028966","ENSMUSG00000021838","Samd4","1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1|sunk","sterile alpha motif domain containing 4","protein-coding"]
[367,"chr10",128092770,128093593,"+",0,"NA","intron (NM_054078, intron 1 of 29)","CpG",398,"NM_054078",116848,"Mm.252213","NM_054078","ENSMUSG00000040054","Baz2a","AA415431|C030005G16Rik|C78388|Tip5|Walp3|mKIAA0314","bromodomain adjacent to zinc finger domain, 2A","protein-coding"]
[976,"chr14",20694687,20695670,"+",0,"NA","TTS (NM_001168273)","TTS (NM_001168273)",210,"NM_028428",73068,"Mm.277552","NM_028428","ENSMUSG00000039357","Fut11","3110009G03Rik|AI317183","fucosyltransferase 11","protein-coding"]
[716,"chr12",3571869,3573037,"+",0,"NA","promoter-TSS (NM_007886)","promoter-TSS (NM_007886)",62,"NR_027870",13528,"Mm.286202","NM_007886","ENSMUSG00000071454","Dtnb","-","dystrobrevin, beta","protein-coding"]
[1886,"chr2",60209408,60210046,"+",0,"NA","promoter-TSS (NM_020575)","promoter-TSS (NM_020575)",-209,"NM_020575",57438,"Mm.260635","NM_020575","ENSMUSG00000026977","2007-03-01","Axo|Axot|Gtrgeo17","membrane-associated ring finger (C3HC4) 7","protein-coding"]
[1821,"chr2",28467813,28468360,"+",0,"NA","promoter-TSS (NM_080452)","promoter-TSS (NM_080452)",20,"NM_001166031",118451,"Mm.294951","NM_080452","ENSMUSG00000035772","Mrps2","1500019M10Rik","mitochondrial ribosomal protein S2","protein-coding"]
[1972,"chr2",129592384,129593859,"+",0,"NA","promoter-TSS (NM_007547)","promoter-TSS (NM_007547)",-48,"NM_001291019",19261,"Mm.1682","NM_007547","ENSMUSG00000037902","Sirpa","AI835480|Bit|CD172a|P84|Ptpns1|SHP-1|SHPS-1|SIRP","signal-regulatory protein alpha","protein-coding"]
[940,"chr13",94358136,94359276,"+",0,"NA","promoter-TSS (NM_009680)","promoter-TSS (NM_009680)",217,"NR_045619",328309,"Mm.174191","NM_183205",null,"Gm9776","A530089L17|ENSMUSG00000042857","predicted gene 9776","ncRNA"]
[685,"chr11",119022724,119024588,"+",0,"NA","intron (NM_007623, intron 2 of 4)","intron (NM_007623, intron 2 of 4)",635,"NM_007623",12416,"Mm.14547","NM_007623","ENSMUSG00000025577","Cbx2","M33|MOD2|pc","chromobox 2","protein-coding"]
[743,"chr12",40445403,40447025,"+",0,"NA","promoter-TSS (NM_172575)","promoter-TSS (NM_172575)",161,"NM_172803",238130,"Mm.341423","NM_172803","ENSMUSG00000035954","Dock4","5330406C03|6330411N01Rik|AF263288|C030023J22|mKIAA0716","dedicator of cytokinesis 4","protein-coding"]
[2265,"chr4",45341795,45342914,"+",0,"NA","exon (NM_153167, exon 1 of 7)","exon (NM_153167, exon 1 of 7)",253,"NM_153167",242418,"Mm.317668","NM_153167","ENSMUSG00000035572","Dcaf10","AA959934|Wdr32","DDB1 and CUL4 associated factor 10","protein-coding"]
[21,"chr1",39193816,39194511,"+",0,"NA","promoter-TSS (NM_008719)","promoter-TSS (NM_008719)",-109,"NM_008719",18143,"Mm.2380","NM_008719","ENSMUSG00000026077","Npas2","MOP4|bHLHe9","neuronal PAS domain protein 2","protein-coding"]
[523,"chr11",75732522,75733385,"+",0,"NA","promoter-TSS (NM_009536)","promoter-TSS (NM_009536)",66,"NM_009536",22627,"Mm.234700","NM_009536","ENSMUSG00000020849","Ywhae","AU019196","tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide","protein-coding"]
[2377,"chr4",133240363,133241589,"+",0,"NA","5' UTR (NM_016693, exon 1 of 29)","5' UTR (NM_016693, exon 1 of 29)",158,"NM_016693",53608,"Mm.36640","NM_016693","ENSMUSG00000028862","Map3k6","Ask2|MAPKKK6|MEKK6","mitogen-activated protein kinase kinase kinase 6","protein-coding"]
[2129,"chr3",69721924,69722485,"+",0,"NA","intron (NM_133787, intron 1 of 15)","CpG",149,"NM_133787",97112,"Mm.21062","NM_133787",null,"Nmd3","C87860","NMD3 homolog (S. cerevisiae)","protein-coding"]
[1460,"chr17",35879642,35880188,"+",0,"NA","exon (NM_026987, exon 1 of 20)","exon (NM_026987, exon 1 of 20)",137,"NM_026987",69192,"Mm.390986","NM_026987","ENSMUSG00000024422","Dhx16","2410006N22Rik|DBP2|Ddx16|mKIAA0577","DEAH (Asp-Glu-Ala-His) box polypeptide 16","protein-coding"]
[453,"chr11",59449781,59450988,"+",0,"NA","promoter-TSS (NM_144521)","promoter-TSS (NM_144521)",339,"NM_001205068",194952,"Mm.295954","NM_178659","ENSMUSG00000036819","Jmjd4","6430559I23","jumonji domain containing 4","protein-coding"]
[723,"chr12",8313340,8314060,"+",0,"NA","intron (NM_021429, intron 1 of 6)","intron (NM_021429, intron 1 of 6)",267,"NM_021429",58240,"Mm.309954","NM_021429","ENSMUSG00000020605","Hs1bp3","-","HCLS1 binding protein 3","protein-coding"]
[2500,"chr5",31251377,31251997,"+",0,"NA","promoter-TSS (NM_027221)","promoter-TSS (NM_027221)",-19,"NM_027221",69815,"Mm.389609","NM_027221","ENSMUSG00000029149","Krtcap3","2010001C09Rik|AW321088|Kcp3","keratinocyte associated protein 3","protein-coding"]
[1202,"chr15",93397892,93398665,"+",0,"NA","promoter-TSS (NM_175363)","promoter-TSS (NM_175363)",12,"NM_026025",67197,"Mm.293181","NM_026025","ENSMUSG00000022635","Zcrb1","2700088M22Rik|Madp-1","zinc finger CCHC-type and RNA binding motif 1","protein-coding"]
[3162,"chr8",70233910,70234935,"+",0,"NA","promoter-TSS (NM_133972)","promoter-TSS (NM_133972)",0,"NM_133972",76813,"Mm.383251","NM_133972","ENSMUSG00000002343","Armc6","2410153K17Rik|AW554412","armadillo repeat containing 6","protein-coding"]
[3303,"chr8",123805600,123806316,"+",0,"NA","promoter-TSS (NM_009003)","promoter-TSS (NM_009003)",-38,"NM_009003",19341,"Mm.9221","NM_009003","ENSMUSG00000019478","Rab4a","AI848268|Rab4","RAB4A, member RAS oncogene family","protein-coding"]
[351,"chr10",120208598,120209101,"+",0,"NA","promoter-TSS (NM_026617)","promoter-TSS (NM_026617)",23,"NM_026617",68212,"Mm.157426","NM_026617","ENSMUSG00000020225","Tmbim4","0610007H07Rik|AU022431","transmembrane BAX inhibitor motif containing 4","protein-coding"]
[1040,"chr14",62760211,62760881,"+",0,"NA","promoter-TSS (NR_045503)","promoter-TSS (NR_045503)",45,"NR_045503",71000,"Mm.399410","NR_045503","ENSMUSG00000097775","4931440J10Rik","-","RIKEN cDNA 4931440J10 gene","ncRNA"]
[2838,"chr6",120666328,120667106,"+",0,"NA","intron (NM_001128151, intron 1 of 18)","CpG-12437",296,"NM_001128151",330409,"Mm.333357","NM_001128151","ENSMUSG00000071226","Cecr2","2610101O16Rik|2810409N01Rik|Gtl4|mKIAA1740","cat eye syndrome chromosome region, candidate 2","protein-coding"]
[595,"chr11",97145958,97146720,"+",0,"NA","promoter-TSS (NR_106094)","promoter-TSS (NR_106094)",80,"NR_106094",102466822,null,"NR_106094","ENSMUSG00000099286","Mir7235","Gm27986|mmu-mir-7235","microRNA 7235","ncRNA"]
[1755,"chr19",53142705,53143489,"+",0,"NA","promoter-TSS (NM_013758)","promoter-TSS (NM_013758)",341,"NM_001164100",27360,"Mm.426080","NM_013758","ENSMUSG00000025026","Add3","AI463285|R75380","adducin 3 (gamma)","protein-coding"]
[1138,"chr15",76380051,76380968,"+",0,"NA","promoter-TSS (NM_175457)","promoter-TSS (NM_175457)",-4,"NM_175457",223658,"Mm.123240","NM_175457","ENSMUSG00000022558","Mroh1","D330001F17Rik|Heatr7a","maestro heat-like repeat family member 1","protein-coding"]
[488,"chr11",69901479,69902140,"+",0,"NA","promoter-TSS (NM_001013414)","promoter-TSS (NM_001013414)",-7,"NM_001291118",216860,"Mm.268347","NM_001013414","ENSMUSG00000047284","Neurl4","-","neuralized E3 ubiquitin protein ligase 4","protein-coding"]
[2926,"chr7",45154076,45154708,"+",0,"NA","promoter-TSS (NM_001278207)","promoter-TSS (NM_001278207)",89,"NM_001278207",68845,"Mm.181689","NM_029406","ENSMUSG00000003423","Pih1d1","1110061L23Rik|4933413A04Rik|Nop17","PIH1 domain containing 1","protein-coding"]
[1854,"chr2",32575304,32576065,"+",0,"NA","promoter-TSS (NM_198191)","promoter-TSS (NM_198191)",-135,"NM_198191",227733,"Mm.78923","NM_198191","ENSMUSG00000046854","Pip5kl1","BC028795","phosphatidylinositol-4-phosphate 5-kinase-like 1","protein-coding"]
[1012,"chr14",45219064,45220374,"+",0,"NA","promoter-TSS (NM_027518)","promoter-TSS (NM_027518)",2,"NM_027518",70713,"Mm.343793","NM_027518","ENSMUSG00000049092","Gpr137c","6330416L11Rik|Gm908|TM7SF1L2","G protein-coupled receptor 137C","protein-coding"]
[1498,"chr17",65783280,65784097,"+",0,"NA","intron (NM_001114131, intron 2 of 19)","CpG-6545",333,"NR_104465",70351,"Mm.48686","NM_146081","ENSMUSG00000061950","Ppp4r1","3110001J10Rik|Pp4r1","protein phosphatase 4, regulatory subunit 1","protein-coding"]
[835,"chr12",112130059,112130930,"+",0,"NA","promoter-TSS (NR_029590)","promoter-TSS (NR_029590)",-386,"NR_029590",387199,null,"NR_029590","ENSMUSG00000065574","Mir203","Mirn203|mir-203|mmu-mir-203","microRNA 203","ncRNA"]
[2182,"chr3",108591123,108592151,"+",0,"NA","intron (NM_181400, intron 1 of 14)","CpG",359,"NM_181400",99512,"Mm.285968","NM_181400","ENSMUSG00000040389","Wdr47","1810073M12Rik|AA552998|mKIAA0893","WD repeat domain 47","protein-coding"]
[1267,"chr16",17508503,17509250,"+",0,"NA","promoter-TSS (NM_025808)","promoter-TSS (NM_025808)",-95,"NM_025808",66863,"Mm.161726","NM_025808","ENSMUSG00000022761","Lztr1","1200003E21Rik|AI591627|AW550890","leucine-zipper-like transcriptional regulator, 1","protein-coding"]
[1032,"chr14",56364630,56365277,"+",0,"NA","promoter-TSS (NM_138652)","promoter-TSS (NM_138652)",-115,"NM_138652",192113,"Mm.273271","NM_138652","ENSMUSG00000022229","Atp12a","Atp1al1|HKalpha2|cHKA","ATPase, H+/K+ transporting, nongastric, alpha polypeptide","protein-coding"]
[113,"chr1",132880185,132882246,"+",0,"NA","intron (NM_010732, intron 1 of 1)","intron (NM_010732, intron 1 of 1)",860,"NM_010732",16980,"Mm.39640","NM_010732","ENSMUSG00000026443","Lrrn2","5730406J09Rik|NLRR-2","leucine rich repeat protein 2, neuronal","protein-coding"]
[901,"chr13",55105143,55105770,"+",0,"NA","exon (NM_012017, exon 1 of 7)","exon (NM_012017, exon 1 of 7)",147,"NM_012017",26919,"Mm.22795","NM_012017","ENSMUSG00000021481","Zfp346","Jaz|Znf346","zinc finger protein 346","protein-coding"]
[2191,"chr3",122419701,122420670,"+",0,"NA","intron (NM_013867, intron 1 of 11)","CpG",405,"NM_013867",29815,"Mm.45815","NM_013867","ENSMUSG00000028121","Bcar3","AI131758|AND-34","breast cancer anti-estrogen resistance 3","protein-coding"]
[152,"chr1",171437238,171438146,"+",0,"NA","exon (NM_172647, exon 1 of 10)","exon (NM_172647, exon 1 of 10)",131,"NM_172647",16456,"Mm.294882","NM_172647","ENSMUSG00000038235","F11r","9130004G24|AA638916|ESTM33|JAM|JAM-1|JAM-A|Jcam|Jcam1|Ly106","F11 receptor","protein-coding"]
[2931,"chr7",45683923,45685209,"+",0,"NA","intron (NM_001289693, intron 1 of 6)","intron (NM_001289693, intron 1 of 6)",544,"NM_001033356",243967,"Mm.291240","NM_001033356","ENSMUSG00000070564","Ntn5","Gm484","netrin 5","protein-coding"]
[342,"chr10",110919740,110920364,"+",0,"NA","promoter-TSS (NM_007792)","promoter-TSS (NM_007792)",-124,"NM_007792",13008,"Mm.2020","NM_007792","ENSMUSG00000020186","Csrp2","AW551867|Crp2|SmLim","cysteine and glycine-rich protein 2","protein-coding"]
[1419,"chr17",28691020,28691679,"+",0,"NA","promoter-TSS (NM_001168514)","promoter-TSS (NM_001168514)",7,"NM_001168514",26416,"Mm.311337","NM_011951","ENSMUSG00000053436","Mapk14","CSBP2|Crk1|Csbp1|Mxi2|PRKM14|PRKM15|p38|p38-alpha|p38MAPK|p38a|p38alpha","mitogen-activated protein kinase 14","protein-coding"]
[862,"chr13",24801000,24801791,"+",0,"NA","promoter-TSS (NM_024473)","promoter-TSS (NM_024473)",-262,"NM_024473",79555,"Mm.266668","NM_024473",null,"BC005537","8030460C05Rik|C78201","cDNA sequence BC005537","protein-coding"]
[341,"chr10",110745276,110745866,"+",0,"NA","5' UTR (NM_178609, exon 1 of 13)","5' UTR (NM_178609, exon 1 of 13)",106,"NM_178609",52679,"Mm.11747","NM_178609","ENSMUSG00000020185","E2f7","A630014C11Rik|D10Ertd739e","E2F transcription factor 7","protein-coding"]
[1056,"chr14",75284146,75284863,"+",0,"NA","TTS (NM_019775)","TTS (NM_019775)",131,"NM_026083",67302,"Mm.74704","NM_026083","ENSMUSG00000022000","Zc3h13","2600010B19Rik|3110050K21Rik|4930570G11Rik|C87618","zinc finger CCCH type containing 13","protein-coding"]
[2883,"chr7",19393914,19395073,"+",0,"NA","TTS (NM_001286038)","TTS (NM_001286038)",5428,"NM_001286038",232943,"Mm.213403","NM_146182","ENSMUSG00000040714","Klc3","BC017147|Klct","kinesin light chain 3","protein-coding"]
[2189,"chr3",122245274,122246372,"+",0,"NA","5' UTR (NM_008129, exon 1 of 7)","5' UTR (NM_008129, exon 1 of 7)",266,"NM_008129",14630,"Mm.292676","NM_008129",null,"Gclm","AI649393|Gcmc|Glclr","glutamate-cysteine ligase, modifier subunit","protein-coding"]
[2287,"chr4",72199900,72201404,"+",0,"NA","promoter-TSS (NR_027923)","promoter-TSS (NR_027923)",241,"NM_011599",21885,"Mm.278444","NM_011599","ENSMUSG00000008305","Tle1","C230057C06Rik|Estm14|Grg-1|Grg1|Tle4l","transducin-like enhancer of split 1, homolog of Drosophila E(spl)","protein-coding"]
[2540,"chr5",67260517,67261359,"+",0,"NA","5' UTR (NM_001285452, exon 1 of 7)","5' UTR (NM_001285452, exon 1 of 7)",373,"NM_030108",67878,"Mm.23217","NM_028975","ENSMUSG00000037720","Tmem33","1110006G02Rik|1600019D15Rik|2410089A21Rik|2700052H22Rik|5430406L04Rik|AA388285|AI314185|AI426615|db83","transmembrane protein 33","protein-coding"]
[3108,"chr8",11005634,11009082,"+",0,"NA","promoter-TSS (NR_046017)","promoter-TSS (NR_046017)",-492,"NR_046017",619321,"Mm.403007","NR_046017","ENSMUSG00000096938","9530052E02Rik","-","RIKEN cDNA 9530052E02 gene","ncRNA"]
[2284,"chr4",62360150,62360723,"+",0,"NA","promoter-TSS (NM_175090)","promoter-TSS (NM_175090)",112,"NM_001045528",338355,"Mm.357792","NM_001045528","ENSMUSG00000066151","Fkbp15","BB131447|C430014M02Rik|FKBO133|FKBP-133|FKBP-15|FKBP133|mKIAA0674","FK506 binding protein 15","protein-coding"]
[64,"chr1",75478757,75480088,"+",0,"NA","promoter-TSS (NM_001001566)","promoter-TSS (NM_001001566)",49,"NM_001001565",74241,"Mm.260577","NM_001001565","ENSMUSG00000032997","Chpf","1700028N03Rik|AI414328|D1Bwg1363e","chondroitin polymerizing factor","protein-coding"]
[2753,"chr6",49073757,49074335,"+",0,"NA","exon (NM_029353, exon 1 of 4)","exon (NM_029353, exon 1 of 4)",251,"NM_029353",75593,"Mm.439947","NM_029353",null,"Malsu1","2410003K15Rik|Matsu1","mitochondrial assembly of ribosomal large subunit 1","protein-coding"]
[1473,"chr17",46674011,46675180,"+",0,"NA","promoter-TSS (NM_144857)","promoter-TSS (NM_144857)",-340,"NM_144857",224823,"Mm.45101","NM_144857","ENSMUSG00000023971","Rrp36","-","ribosomal RNA processing 36 homolog (S. cerevisiae)","protein-coding"]
[881,"chr13",45507256,45507851,"+",0,"NA","5' UTR (NM_025508, exon 1 of 9)","5' UTR (NM_025508, exon 1 of 9)",109,"NM_025508",66355,"Mm.290802","NM_025508","ENSMUSG00000000253","Gmpr","2310004P21Rik|AV028449|GMPR 1","guanosine monophosphate reductase","protein-coding"]
[2461,"chr4",156109812,156110403,"+",0,"NA","5' UTR (NM_177205, exon 1 of 10)","5' UTR (NM_177205, exon 1 of 10)",109,"NM_177205",230996,"Mm.318925","NM_145557","ENSMUSG00000059939","9430015G10Rik","-","RIKEN cDNA 9430015G10 gene","protein-coding"]
[3186,"chr8",83165300,83166413,"+",0,"NA","5' UTR (NM_027758, exon 1 of 18)","5' UTR (NM_027758, exon 1 of 18)",504,"NM_027758",71310,"Mm.24031","NM_027758","ENSMUSG00000031709","Tbc1d9","4933431N12Rik|AI847101|AW490653|C76116","TBC1 domain family, member 9","protein-coding"]
[45,"chr1",60180175,60180941,"+",0,"NA","promoter-TSS (NM_173444)","promoter-TSS (NM_173444)",-41,"NM_173444",269198,"Mm.205224","NM_173444",null,"Nbeal1","2310076G13Rik|A530050O19Rik|A530083I02Rik|AI662228|ALS2CR17","neurobeachin like 1","protein-coding"]
[405,"chr11",32226164,32226894,"+",0,"NA","promoter-TSS (NM_010822)","promoter-TSS (NM_010822)",24,"NM_010822",268395,"Mm.263161","NM_010822","ENSMUSG00000020287","Mpg","9830006D05|AI326268|APNG|Aag|Mid1","N-methylpurine-DNA glycosylase","protein-coding"]
[507,"chr11",72795305,72796846,"+",0,"NA","promoter-TSS (NM_001045536)","promoter-TSS (NM_001045536)",-151,"NM_001045536",195018,"Mm.272030","NM_001045536","ENSMUSG00000055670","Zzef1","8430405D05Rik|BC051585|C130099L13Rik|C85424|NSPA|mKIAA0399","zinc finger, ZZ-type with EF hand domain 1","protein-coding"]
[1173,"chr15",81585443,81586817,"+",0,"NA","promoter-TSS (NM_177821)","promoter-TSS (NM_177821)",-84,"NM_177821",328572,"Mm.258397","NM_177821","ENSMUSG00000055024","Ep300","A430090G16|A730011L11|KAT3B|p300|p300 HAT","E1A binding protein p300","protein-coding"]
[1963,"chr2",127336006,127336670,"+",0,"NA","exon (NM_010090, exon 1 of 4)","exon (NM_010090, exon 1 of 4)",179,"NM_010090",13537,"Mm.4729","NM_010090","ENSMUSG00000027368","Dusp2","PAC1","dual specificity phosphatase 2","protein-coding"]
[309,"chr10",82127788,82128440,"+",0,"NA","intron (NM_001163064, intron 1 of 3)","CpG",101,"NM_001163064",216177,"Mm.482395","NM_001163064","ENSMUSG00000078435","AU041133","-","expressed sequence AU041133","protein-coding"]
[1734,"chr19",43440133,43441473,"+",0,"NA","exon (NM_031396, exon 1 of 11)","exon (NM_031396, exon 1 of 11)",367,"NM_031396",83674,"Mm.329864","NM_031396","ENSMUSG00000025189","Cnnm1","AI846314|Acdp1|CLP-1","cyclin M1","protein-coding"]
[2085,"chr3",14886125,14887055,"+",0,"NA","5' UTR (NM_009801, exon 1 of 7)","5' UTR (NM_009801, exon 1 of 7)",164,"NM_009801",12349,"Mm.1186","NM_009801","ENSMUSG00000027562","Car2","AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5","carbonic anhydrase 2","protein-coding"]
[1733,"chr19",42170412,42171111,"+",0,"NA","5' UTR (NM_177319, exon 1 of 13)","5' UTR (NM_177319, exon 1 of 13)",194,"NM_001164531",319740,"Mm.287359","NM_177319","ENSMUSG00000018820","Zfyve27","2210011N02Rik|9530077C24Rik|AI426636|AI593546|AI835681","zinc finger, FYVE domain containing 27","protein-coding"]
[3230,"chr8",104250726,104251335,"+",0,"NA","non-coding (NR_104433, exon 1 of 5)","non-coding (NR_104433, exon 1 of 5)",169,"NM_001286383",75458,"Mm.269219","NM_029295","ENSMUSG00000054400","Cklf","1700001C14Rik|1810018M11Rik|C32|CKLF1|CKLF3|CKLF4|CKLF5|Cklf2|Cklf6|HSPC224|UCK-1","chemokine-like factor","protein-coding"]
[2113,"chr3",55111910,55112806,"+",0,"NA","5' UTR (NM_001144987, exon 1 of 9)","5' UTR (NM_001144987, exon 1 of 9)",192,"NM_001144987",229285,"Mm.235523","NM_144895","ENSMUSG00000036580","Spg20","AI840044|C79168|SPARTIN|TAHCCP1|mKIAA0610","spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)","protein-coding"]
[2153,"chr3",94309828,94310423,"+",0,"NA","promoter-TSS (NM_029431)","promoter-TSS (NM_029431)",-7,"NM_029431",75778,"Mm.45092","NM_029431","ENSMUSG00000028145","Them4","2700077M13Rik|4921507I02Rik","thioesterase superfamily member 4","protein-coding"]
[3383,"chr9",57520997,57521909,"+",0,"NA","intron (NM_007747, intron 1 of 4)","CpG",221,"NM_007747",12858,"Mm.273403","NM_007747","ENSMUSG00000000088","Cox5a","AA959768|CcOX","cytochrome c oxidase subunit Va","protein-coding"]
[1258,"chr16",15886617,15888291,"+",0,"NA","exon (NM_007679, exon 1 of 1)","exon (NM_007679, exon 1 of 1)",168,"NM_007679",12609,"Mm.347407","NM_007679",null,"Cebpd","c/EBPdelta","CCAAT/enhancer binding protein (C/EBP), delta","protein-coding"]
[824,"chr12",110850000,110851075,"+",0,"NA","exon (NM_001199785, exon 1 of 7)","exon (NM_001199785, exon 1 of 7)",258,"NM_028365",72805,"Mm.443524","NM_028365","ENSMUSG00000021271","Zfp839","2810455K09Rik","zinc finger protein 839","protein-coding"]
[120,"chr1",134646316,134647145,"+",0,"NA","promoter-TSS (NM_009307)","promoter-TSS (NM_009307)",49,"NM_009307",20980,"Mm.5102","NM_009307","ENSMUSG00000026452","Syt2","IP4BP|R74640|mKIAA4194","synaptotagmin II","protein-coding"]
[2568,"chr5",103424560,103425870,"+",0,"NA","promoter-TSS (NM_011204)","promoter-TSS (NM_011204)",23,"NM_011204",19249,"Mm.3414","NM_011204","ENSMUSG00000034573","Ptpn13","AI324989|PTP-BL|PTPL1|Ptpri|RIP","protein tyrosine phosphatase, non-receptor type 13","protein-coding"]
[1148,"chr15",76723413,76724372,"+",0,"NA","promoter-TSS (NM_145472)","promoter-TSS (NM_145472)",-47,"NM_176828",223665,"Mm.291713","NM_145472","ENSMUSG00000033707","C030006K11Rik","1110033I13Rik","RIKEN cDNA C030006K11 gene","protein-coding"]
[2841,"chr6",121210194,121211010,"+",0,"NA","promoter-TSS (NM_017379)","promoter-TSS (NM_017379)",-132,"NM_017379",53857,"Mm.32884","NM_017379",null,"Tuba8","-","tubulin, alpha 8","protein-coding"]
[2386,"chr4",134923391,134924649,"+",0,"NA","exon (NM_023665, exon 2 of 5)","exon (NM_023665, exon 2 of 5)",395,"NM_023665",27981,"Mm.331964","NM_023665","ENSMUSG00000037266","Rsrp1","2700043I21Rik|D4Ucla2|D4Wsu53e","arginine/serine rich protein 1","protein-coding"]
[2313,"chr4",107177976,107179431,"+",0,"NA","promoter-TSS (NM_029565)","promoter-TSS (NM_029565)",73,"NM_029565",56374,"Mm.291192","NM_029565","ENSMUSG00000028618","Tmem59","1110001M20Rik|3110046P06Rik|AI256529|D4Ertd20e|MTDCF1|ORF18","transmembrane protein 59","protein-coding"]
[254,"chr10",75589127,75590121,"+",0,"NA","5' UTR (NM_011820, exon 1 of 12)","5' UTR (NM_011820, exon 1 of 12)",243,"NM_011820",23887,"Mm.257927","NM_011820","ENSMUSG00000006344","Ggt5","AI551243|GGL|GGT-REL|Ggtla1","gamma-glutamyltransferase 5","protein-coding"]
[392,"chr11",20201293,20202076,"+",0,"NA","promoter-TSS (NM_008996)","promoter-TSS (NM_008996)",82,"NM_008996",19324,"Mm.271944","NM_008996","ENSMUSG00000020149","Rab1a","Gtbp|Rab-1|Rab1|Ypt1|mKIAA3012","RAB1A, member RAS oncogene family","protein-coding"]
[1321,"chr16",45158553,45159323,"+",0,"NA","promoter-TSS (NM_028756)","promoter-TSS (NM_028756)",109,"NM_026402",67841,"Mm.41775","NM_026402","ENSMUSG00000022663","Atg3","2610016C12Rik|APG3|Apg3l|Atg3l|PC3-96","autophagy related 3","protein-coding"]
[2242,"chr4",31963677,31964371,"+",0,"NA","promoter-TSS (NM_172688)","promoter-TSS (NM_172688)",-83,"NM_009316",26409,"Mm.258589","NM_009316","ENSMUSG00000028284","Map3k7","B430101B05|C87327|Tak1","mitogen-activated protein kinase kinase kinase 7","protein-coding"]
[2442,"chr4",152325572,152326446,"+",0,"NA","intron (NR_102291, intron 1 of 4)","CpG",283,"NR_102291",19934,"Mm.307846","NM_009079","ENSMUSG00000028936","Rpl22","2700038K18Rik","ribosomal protein L22","protein-coding"]
[2254,"chr4",43058637,43059569,"+",0,"NA","5' UTR (NM_001081413, exon 1 of 40)","5' UTR (NM_001081413, exon 1 of 40)",150,"NM_001310758",22249,"Mm.128892","NM_021468","ENSMUSG00000028456","Unc13b","Munc13-1|Munc13-2|Unc13a|Unc13h1|Unc13h2","unc-13 homolog B (C. elegans)","protein-coding"]
[1987,"chr2",143914681,143915599,"+",0,"NA","promoter-TSS (NM_019771)","promoter-TSS (NM_019771)",-191,"NM_019771",56431,"Mm.28919","NM_019771","ENSMUSG00000015932","Dstn","2610043P17Rik|ADF|AU042046|Dsn|corn1|sid23p","destrin","protein-coding"]
[3354,"chr9",44604858,44605446,"+",0,"NA","intron (NM_001110826, intron 1 of 13)","CpG",260,"NM_181324",13209,"Mm.267061","NM_007841","ENSMUSG00000032097","Ddx6","1110001P04Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck","DEAD (Asp-Glu-Ala-Asp) box polypeptide 6","protein-coding"]
[813,"chr12",105784616,105785227,"+",0,"NA","intron (NM_011112, intron 1 of 21)","CpG",219,"NM_011112",18789,"Mm.255877","NM_011112","ENSMUSG00000021111","Papola","Pap|PapIII|Plap","poly (A) polymerase alpha","protein-coding"]
[2014,"chr2",156475206,156476198,"+",0,"NA","5' UTR (NM_001006664, exon 1 of 22)","5' UTR (NM_001006664, exon 1 of 22)",168,"NM_001006664",13821,"Mm.20852","NM_013510","ENSMUSG00000027624","Epb41l1","4.1N|Epb4.1l1|NBL1|mKIAA0338","erythrocyte membrane protein band 4.1 like 1","protein-coding"]
[2602,"chr5",115235286,115236109,"+",0,"NA","promoter-TSS (NM_026398)","promoter-TSS (NM_026398)",-154,"NM_026398",117109,"Mm.24636","NM_026398","ENSMUSG00000060152","Pop5","1500019J17Rik|2700077E03Rik|AW049989|Rnasep3","processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)","protein-coding"]
[644,"chr11",106216870,106217431,"+",0,"NA","promoter-TSS (NM_026009)","promoter-TSS (NM_026009)",224,"NM_028074",72047,"Mm.41367","NM_028074","ENSMUSG00000020705","Ddx42","1810047H21Rik|AW319508|AW556242|B430002H05Rik|RHELP|RNAHP|SF3b125","DEAD (Asp-Glu-Ala-Asp) box polypeptide 42","protein-coding"]
[2477,"chr5",24364505,24365242,"+",0,"NA","promoter-TSS (NM_008713)","promoter-TSS (NM_008713)",54,"NM_008713",18127,"Mm.258415","NM_008713","ENSMUSG00000028978","Nos3","2310065A03Rik|Nos-3|eNOS|ecNOS","nitric oxide synthase 3, endothelial cell","protein-coding"]
[851,"chr13",3633927,3634584,"+",0,"NA","intron (NM_001267724, intron 1 of 3)","CpG",223,"NM_001267724",142688,"Mm.253061","NM_178283","ENSMUSG00000033781","Asb13","2210015B19Rik|6430573K02Rik|Asb-13|C85285","ankyrin repeat and SOCS box-containing 13","protein-coding"]
[3360,"chr9",45906289,45907054,"+",0,"NA","non-coding (NR_104055, exon 1 of 18)","non-coding (NR_104055, exon 1 of 18)",102,"NR_104055",18554,"Mm.3255","NM_008794","ENSMUSG00000035382","Pcsk7","AA959856|PC7|SPC7","proprotein convertase subtilisin/kexin type 7","protein-coding"]
[1820,"chr2",28205481,28206365,"+",0,"NA","5' UTR (NM_001038612, exon 1 of 4)","5' UTR (NM_001038612, exon 1 of 4)",234,"NM_019498",56177,"Mm.43278","NM_019498","ENSMUSG00000026833","Olfm1","AMY|AW742568|Noe1|OlfA|Pancortin|Pancortin3","olfactomedin 1","protein-coding"]
[399,"chr11",22990324,22990974,"+",0,"NA","promoter-TSS (NM_009837)","promoter-TSS (NM_009837)",56,"NM_009837",12464,"Mm.296985","NM_009837","ENSMUSG00000007739","Cct4","2610204B21Rik|A45|C78323|Cctd","chaperonin containing Tcp1, subunit 4 (delta)","protein-coding"]
[2296,"chr4",89137295,89138014,"+",0,"NA","intron (NM_024433, intron 1 of 7)","CpG",284,"NM_024433",66902,"Mm.28500","NM_024433","ENSMUSG00000062937","Mtap","1300019I21Rik|MSAP","methylthioadenosine phosphorylase","protein-coding"]
[2110,"chr3",54735005,54735946,"+",0,"NA","promoter-TSS (NM_025442)","promoter-TSS (NM_025442)",-64,"NM_025442",66248,"Mm.144218","NM_025442","ENSMUSG00000036632","Alg5","1500026A19Rik|2600005J22Rik|AV009521|AV170001|AW545564","asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase)","protein-coding"]
[1811,"chr2",26503330,26504009,"+",0,"NA","promoter-TSS (NR_132655)","promoter-TSS (NR_132655)",153,"NM_008714",18128,"Mm.290610","NM_008714","ENSMUSG00000026923","Notch1","9930111A19Rik|Mis6|N1|Tan1|lin-12","notch 1","protein-coding"]
[436,"chr11",53763314,53764253,"+",0,"NA","promoter-TSS (NR_106131)","promoter-TSS (NR_106131)",-129,"NR_106131",102465772,null,"NR_106131","ENSMUSG00000099153","Mir7671","Gm27802|mmu-mir-7671","microRNA 7671","ncRNA"]
[1342,"chr16",91688238,91689157,"+",0,"NA","promoter-TSS (NM_021720)","promoter-TSS (NM_021720)",31,"NM_021720",60364,"Mm.328698","NM_021720","ENSMUSG00000022960","Donson","1110025J21Rik|AI845729|ORF60","downstream neighbor of SON","protein-coding"]
[2457,"chr4",155891434,155892735,"+",0,"NA","promoter-TSS (NM_001033490)","promoter-TSS (NM_001033490)",209,"NM_207223",140500,"Mm.219591","NM_207223","ENSMUSG00000029033","Acap3","Centb5|Kiaa1716-hp|mKIAA1716","ArfGAP with coiled-coil, ankyrin repeat and PH domains 3","protein-coding"]
[1968,"chr2",128817829,128818865,"+",0,"NA","promoter-TSS (NM_028248)","promoter-TSS (NM_028248)",44,"NM_028248",72477,"Mm.259688","NM_028248","ENSMUSG00000014353","Tmem87b","2610301K12Rik|2810431I02Rik|AU014804","transmembrane protein 87B","protein-coding"]
[1802,"chr2",25423154,25423940,"+",0,"NA","promoter-TSS (NM_001177367)","promoter-TSS (NM_001177367)",-147,"NM_001177366",14347,"Mm.1203","NM_013524","ENSMUSG00000036587","Fut7","AI853193|FTVII|Fuc-TVII|FucT-VII","fucosyltransferase 7","protein-coding"]
[94,"chr1",93803440,93804424,"+",0,"NA","promoter-TSS (NM_025454)","promoter-TSS (NM_025454)",-33,"NM_025454",66262,"Mm.64065","NM_025454","ENSMUSG00000026283","Ing5","1700001C14Rik|1700027H23Rik|1810018M11Rik|AI225768","inhibitor of growth family, member 5","protein-coding"]
[213,"chr10",41475946,41476791,"+",0,"NA","promoter-TSS (NM_138315)","promoter-TSS (NM_138315)",54,"NM_138315",171580,"Mm.290431","NM_138315","ENSMUSG00000019823","Mical1","MICAL|MICAL-1|Nical","microtubule associated monooxygenase, calponin and LIM domain containing 1","protein-coding"]
[2775,"chr6",72354912,72356059,"+",0,"NA","promoter-TSS (NM_144916)","promoter-TSS (NM_144916)",2,"NM_144916",232086,"Mm.491165","NM_144916","ENSMUSG00000055912","Tmem150a","BC014685|Tmem150","transmembrane protein 150A","protein-coding"]
[1450,"chr17",35058794,35059568,"+",0,"NA","TTS (NM_033444)","TTS (NM_033444)",146,"NM_016765",51793,"Mm.1457","NM_016765","ENSMUSG00000007039","Ddah2","1110003M04Rik|AU019324|AW413173|DDAH-2|DDAHII|Ddah|G6a|NG30","dimethylarginine dimethylaminohydrolase 2","protein-coding"]
[3011,"chr7",110018113,110019135,"+",0,"NA","intron (NM_181517, intron 1 of 24)","CpG",199,"NM_181517",233726,"Mm.222328","NM_181517","ENSMUSG00000066232","Ipo7","A330055O14Rik|C330016G14|Imp7|Ranbp7","importin 7","protein-coding"]
[2863,"chr6",148047125,148047779,"+",0,"NA","promoter-TSS (NM_178797)","promoter-TSS (NM_178797)",36,"NM_178797",330450,"Mm.447274","NM_178797","ENSMUSG00000030303","Far2","A230046P18|AW048109|BC055759|Mlstd1","fatty acyl CoA reductase 2","protein-coding"]
[2668,"chr5",135778441,135779056,"+",0,"NA","promoter-TSS (NM_029659)","promoter-TSS (NM_029659)",99,"NM_008617",17448,"Mm.297096","NM_008617","ENSMUSG00000019179","Mdh2","MDH|Mdh-2|Mor-1|Mor1","malate dehydrogenase 2, NAD (mitochondrial)","protein-coding"]
[568,"chr11",86683362,86684162,"+",0,"NA","promoter-TSS (NM_001098810)","promoter-TSS (NM_001098810)",60,"NM_029478",75909,"Mm.390398","NM_029478","ENSMUSG00000018171","Vmp1","3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|mir-21a|ni-2","vacuole membrane protein 1","protein-coding"]
[3250,"chr8",107047974,107049036,"+",0,"NA","TTS (NM_139229)","TTS (NM_139229)",109,"NM_026513",68023,"Mm.482335","NM_026513","ENSMUSG00000078931","Pdf","2610019N19Rik","peptide deformylase (mitochondrial)","protein-coding"]
[3098,"chr7",145205459,145206426,"+",0,"NA","non-coding (NR_033626, exon 3 of 3)","non-coding (NR_033626, exon 3 of 3)",2177,"NR_033626",100040049,"Mm.102235","NR_033626",null,"1810010D01Rik","Gm2572","RIKEN cDNA 1810010D01 gene","ncRNA"]
[2273,"chr4",48584826,48586016,"+",0,"NA","5' UTR (NM_021436, exon 1 of 10)","5' UTR (NM_021436, exon 1 of 10)",228,"NM_021436",230157,"Mm.422686","NM_021436","ENSMUSG00000028347","Tmeff1","A830033E11|M7365|Tr1","transmembrane protein with EGF-like and two follistatin-like domains 1","protein-coding"]
[2411,"chr4",140701113,140701701,"+",0,"NA","promoter-TSS (NM_173867)","promoter-TSS (NM_173867)",-66,"NM_173867",108911,"Mm.253","NM_173867","ENSMUSG00000040945","Rcc2","2610510H01Rik|2610529N02Rik|AA536646|AA675016|Td60|mKIAA1470","regulator of chromosome condensation 2","protein-coding"]
[3476,"chr9",108914448,108915081,"+",0,"NA","exon (NM_027066, exon 1 of 2)","exon (NM_027066, exon 1 of 2)",145,"NM_027066",69384,"Mm.158271","NM_027066","ENSMUSG00000025652","Tmem89","1700024B07Rik","transmembrane protein 89","protein-coding"]
[1129,"chr15",75924371,75925372,"+",0,"NA","3' UTR (NM_031201, exon 11 of 11)","3' UTR (NM_031201, exon 11 of 11)",-3311,"NM_025412",66194,"Mm.250599","NM_025412","ENSMUSG00000022571","Pycrl","1110058B13Rik|2700073G24Rik","pyrroline-5-carboxylate reductase-like","protein-coding"]
[791,"chr12",86241656,86242561,"+",0,"NA","intron (NM_027405, intron 1 of 9)","CpG",230,"NM_027405",70373,"Mm.252967","NM_027405","ENSMUSG00000021254","Gpatch2l","1700020O03Rik|4732487G21Rik|A630090I05Rik|Kiaa1152","G patch domain containing 2 like","protein-coding"]
[3330,"chr9",21545796,21546966,"+",0,"NA","promoter-TSS (NM_021531)","promoter-TSS (NM_021531)",-513,"NM_021531",59035,"Mm.178115","NM_021531","ENSMUSG00000032185","Carm1","Prmt4","coactivator-associated arginine methyltransferase 1","protein-coding"]
[1143,"chr15",76538145,76539245,"+",0,"NA","promoter-TSS (NM_013909)","promoter-TSS (NM_013909)",51,"NM_013909",30840,"Mm.275279","NM_013909","ENSMUSG00000022559","Fbxl6","AU021795|Fbl6","F-box and leucine-rich repeat protein 6","protein-coding"]
[1355,"chr17",7169925,7170624,"+",0,"NA","5' UTR (NM_011299, exon 1 of 21)","5' UTR (NM_011299, exon 1 of 21)",159,"NM_011299",20112,"Mm.268383","NM_011299","ENSMUSG00000023809","Rps6ka2","90kDa|D17Wsu134e|Rps6ka-rs1|Rsk3|p90rsk|pp90rsk","ribosomal protein S6 kinase, polypeptide 2","protein-coding"]
[2848,"chr6",125145220,125146115,"+",0,"NA","TTS (NM_138747)","TTS (NM_138747)",443,"NM_001302779",320678,"Mm.129415","NM_178787","ENSMUSG00000038271","Iffo1","4733401N06Rik|A930037G23Rik|HOM-TES-103|Iffo","intermediate filament family orphan 1","protein-coding"]
[2231,"chr4",11965822,11966961,"+",0,"NA","promoter-TSS (NM_001033453)","promoter-TSS (NM_001033453)",59,"NM_001098230",381511,"Mm.331489","NM_001033453","ENSMUSG00000049225","Pdp1","Gm1024|Ppm2c","pyruvate dehyrogenase phosphatase catalytic subunit 1","protein-coding"]
[3231,"chr8",104540707,104541675,"+",0,"NA","promoter-TSS (NM_001301165)","promoter-TSS (NM_001301165)",-118,"NM_001301165",12354,"Mm.129265","NM_053070","ENSMUSG00000031883","Car7","AV343731|Ca7","carbonic anhydrase 7","protein-coding"]
[3095,"chr7",144838544,144839960,"+",0,"NA","intron (NM_008007, intron 1 of 2)","CpG",640,"NM_008007",14174,"Mm.4947","NM_008007","ENSMUSG00000031074","Fgf3","Fgf-3|Int-2|Int-P","fibroblast growth factor 3","protein-coding"]
[1961,"chr2",126707074,126707704,"+",0,"NA","promoter-TSS (NM_019729)","promoter-TSS (NM_019729)",61,"NM_019729",84092,"Mm.272629","NM_019729","ENSMUSG00000027363","Usp8","AI574262|AW557536|Ubpy|mKIAA0055","ubiquitin specific peptidase 8","protein-coding"]
[386,"chr11",6291446,6292508,"+",0,"NA","promoter-TSS (NM_001252288)","promoter-TSS (NM_001252288)",380,"NM_001252283",18293,"Mm.276348","NM_010956","ENSMUSG00000020456","Ogdh","2210403E04Rik|2210412K19Rik|AA409584|d1401|mKIAA4192","oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)","protein-coding"]
[916,"chr13",64248527,64249214,"+",0,"NA","promoter-TSS (NM_001122989)","promoter-TSS (NM_001122989)",170,"NR_045798",66503,"Mm.443331","NR_045798","ENSMUSG00000097101","1810034E14Rik","-","RIKEN cDNA 1810034E14 gene","ncRNA"]
[2043,"chr2",164785520,164786480,"+",0,"NA","promoter-TSS (NM_133924)","promoter-TSS (NM_133924)",-21,"NM_133924",101113,"Mm.295647","NM_133924",null,"Snx21","5730407K14Rik|AI481716","sorting nexin family member 21","protein-coding"]
[1457,"chr17",35667026,35668157,"+",0,"NA","promoter-TSS (NM_175137)","promoter-TSS (NM_175137)",1,"NM_175137",68915,"Mm.32002","NM_175137","ENSMUSG00000038838","Vars2","1190004I24Rik|Vars2l|mKIAA1885","valyl-tRNA synthetase 2, mitochondrial (putative)","protein-coding"]
[200,"chr10",21993907,21994897,"+",0,"NA","promoter-TSS (NM_011361)","promoter-TSS (NM_011361)",-264,"NM_011361",20393,"Mm.28405","NM_011361","ENSMUSG00000019970","Sgk1","Sgk","serum/glucocorticoid regulated kinase 1","protein-coding"]
[1261,"chr16",17069726,17070431,"+",0,"NA","promoter-TSS (NM_023249)","promoter-TSS (NM_023249)",-61,"NM_023249",106369,"Mm.237941","NM_023249","ENSMUSG00000022773","Ypel1","0610009L05Rik|1700016N17Rik|1700019O22Rik|4921520K19Rik|4930511F14Rik|AV118478|Dgl1|Ppil2|mdgl-1","yippee-like 1 (Drosophila)","protein-coding"]
[1352,"chr17",5840807,5841992,"+",0,"NA","promoter-TSS (NM_025664)","promoter-TSS (NM_025664)",19,"NM_025664",66616,"Mm.89515","NM_025664","ENSMUSG00000002365","Snx9","2700073N08Rik|SDP1|SH3PX1","sorting nexin 9","protein-coding"]
[329,"chr10",94198927,94199461,"+",0,"NA","intron (NM_025551, intron 1 of 3)","intron (NM_025551, intron 1 of 3)",185,"NM_025551",66414,"Mm.27886","NM_025551","ENSMUSG00000020022","Ndufa12","2410011G03Rik|AW112974","NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12","protein-coding"]
[525,"chr11",76217359,76217864,"+",0,"NA","promoter-TSS (NM_177367)","promoter-TSS (NM_177367)",-2,"NM_021294",13168,"Mm.347413","NM_021294","ENSMUSG00000038057","Dbil5","ELP","diazepam binding inhibitor-like 5","protein-coding"]
[2970,"chr7",80294131,80294975,"+",0,"NA","5' UTR (NM_145150, exon 1 of 14)","5' UTR (NM_145150, exon 1 of 14)",102,"NM_001285998",233406,"Mm.227274","NM_145150","ENSMUSG00000038943","Prc1","D7Ertd348e","protein regulator of cytokinesis 1","protein-coding"]
[1621,"chr19",3282477,3283109,"+",0,"NA","promoter-TSS (NM_172252)","promoter-TSS (NM_172252)",217,"NM_009212",20589,"Mm.3179","NM_009212",null,"Ighmbp2","AEP|Catf1|RIPE3b1|Smbp-2|Smbp2|Smubp2|nmd|sma","immunoglobulin mu binding protein 2","protein-coding"]
[27,"chr1",43098406,43099112,"+",0,"NA","promoter-TSS (NM_133818)","promoter-TSS (NM_133818)",49,"NM_133818",98404,"Mm.28817","NM_133818","ENSMUSG00000010290","AI597479","-","expressed sequence AI597479","protein-coding"]
[787,"chr12",85110578,85111277,"+",0,"NA","promoter-TSS (NM_030225)","promoter-TSS (NM_030225)",94,"NM_030225",78920,"Mm.296221","NM_030225","ENSMUSG00000004789","Dlst","1600017E01Rik|4632413C10Rik|4930529O08Rik|DLTS","dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)","protein-coding"]
[2331,"chr4",120267042,120269203,"+",0,"NA","exon (NM_194060, exon 2 of 2)","exon (NM_194060, exon 2 of 2)",19139,"NM_194060",329934,"Mm.277090","NM_194060","ENSMUSG00000052135","Foxo6","-","forkhead box O6","protein-coding"]
[1902,"chr2",74711843,74712520,"+",0,"NA","5' UTR (NM_010468, exon 1 of 3)","5' UTR (NM_010468, exon 1 of 3)",188,"NM_010468",15434,"Mm.430708","NM_010468","ENSMUSG00000079277","Hoxd3","Hox-4.1|Hox-5.5","homeobox D3","protein-coding"]
[1561,"chr18",36348315,36349320,"+",0,"NA","intron (NM_001081365, intron 1 of 2)","CpG",193,"NM_001081365",66060,"Mm.272527","NM_001081365",null,"Cystm1","0610010O12Rik","cysteine-rich transmembrane module containing 1","protein-coding"]
[161,"chr1",180568685,180569472,"+",0,"NA","exon (NM_007415, exon 1 of 23)","exon (NM_007415, exon 1 of 23)",103,"NM_007415",11545,"Mm.277779","NM_007415","ENSMUSG00000026496","Parp1","5830444G22Rik|AI893648|ARTD1|Adprp|Adprt1|C80510|PARP|PPOL|parp-1|sPARP-1","poly (ADP-ribose) polymerase family, member 1","protein-coding"]
[1866,"chr2",35282219,35282703,"+",0,"NA","promoter-TSS (NM_146120)","promoter-TSS (NM_146120)",81,"NM_146120",227753,"Mm.443","NM_146120","ENSMUSG00000026879","Gsn","ADF","gelsolin","protein-coding"]
[2001,"chr2",153648985,153650151,"+",0,"NA","5' UTR (NM_001003960, exon 1 of 23)","5' UTR (NM_001003960, exon 1 of 23)",119,"NM_001271747",13436,"Mm.89772","NM_010068","ENSMUSG00000027478","Dnmt3b","MmuIIIB","DNA methyltransferase 3B","protein-coding"]
[3216,"chr8",92855205,92855728,"+",0,"NA","exon (NM_173014, exon 1 of 14)","exon (NM_173014, exon 1 of 14)",116,"NM_173014",270084,"Mm.21463","NM_173014","ENSMUSG00000033192","Lpcat2","A330042H22|Aytl1|Aytl1a|lpafat1","lysophosphatidylcholine acyltransferase 2","protein-coding"]
[1310,"chr16",35540683,35542187,"+",0,"NA","promoter-TSS (NM_013661)","promoter-TSS (NM_013661)",73,"NM_013661",20357,"Mm.42015","NM_013661","ENSMUSG00000052133","Sema5b","AI893641|SemG|Semag|mKIAA1445","sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B","protein-coding"]
[109,"chr1",131962911,131963896,"+",0,"NA","intron (NM_001177628, intron 1 of 4)","CpG",488,"NM_001177628",212980,"Mm.200307","NM_145977","ENSMUSG00000026435","Slc45a3","2210413P12Rik|AU023994|AU043764|IPCA-6|PRST|Pcanap6","solute carrier family 45, member 3","protein-coding"]
[3459,"chr9",107568983,107569681,"+",0,"NA","intron (NM_010489, intron 1 of 3)","CpG",169,"NM_010489",15587,"Mm.4834","NM_010489","ENSMUSG00000010047","Hyal2","AI256841|AU020858|AW555733","hyaluronoglucosaminidase 2","protein-coding"]
[2115,"chr3",58576482,58577190,"+",0,"NA","exon (NM_001040396, exon 1 of 6)","exon (NM_001040396, exon 1 of 6)",178,"NM_001040396",69227,"Mm.270950","NM_001040396","ENSMUSG00000075700","Selt","2810407C02Rik|5730408P04Rik","selenoprotein T","protein-coding"]
[2318,"chr4",109977537,109978763,"+",0,"NA","5' UTR (NM_172296, exon 1 of 3)","5' UTR (NM_172296, exon 1 of 3)",125,"NM_172296",242620,"Mm.32825","NM_172296","ENSMUSG00000047143","Dmrta2","Dmrt5","doublesex and mab-3 related transcription factor like family A2","protein-coding"]
[2651,"chr5",129019568,129020228,"+",0,"NA","promoter-TSS (NM_009391)","promoter-TSS (NM_009391)",-258,"NM_009391",19384,"Mm.297440","NM_009391","ENSMUSG00000029430","Ran","-","RAN, member RAS oncogene family","protein-coding"]
[1239,"chr16",4938766,4939574,"+",0,"NA","promoter-TSS (NM_001316715)","promoter-TSS (NM_001316715)",59,"NM_025839",66911,"Mm.428698","NM_025839","ENSMUSG00000022516","Nudt16l1","1110001K21Rik|5330437I08Rik|Sdos","nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1","protein-coding"]
[3035,"chr7",123123802,123124536,"+",0,"NA","5' UTR (NM_144925, exon 1 of 24)","5' UTR (NM_144925, exon 1 of 24)",284,"NM_144925",233833,"Mm.102305","NM_144925","ENSMUSG00000052707","Tnrc6a","2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6","trinucleotide repeat containing 6a","protein-coding"]
[2764,"chr6",54816648,54817583,"+",0,"NA","exon (NM_199143, exon 1 of 5)","exon (NM_199143, exon 1 of 5)",199,"NM_199143",387524,"Mm.286149","NM_199143",null,"Znrf2","1190002C14Rik|AU044205|D6Ertd365e","zinc and ring finger 2","protein-coding"]
[2797,"chr6",88084452,88085168,"+",0,"NA","intron (NM_133933, intron 1 of 9)","CpG",337,"NM_133933",103963,"Mm.188544","NM_133933","ENSMUSG00000030062","Rpn1","AU018702|D6Wsu137e|Rpn-1","ribophorin I","protein-coding"]
[769,"chr12",78748445,78749321,"+",0,"NA","promoter-TSS (NM_019579)","promoter-TSS (NM_019579)",-64,"NM_019579",56217,"Mm.425777","NM_019579","ENSMUSG00000021112","Mpp5","3830420B02Rik|AI255216|AI644496|Pals1","membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)","protein-coding"]
[1556,"chr18",34861041,34861873,"+",0,"NA","5' UTR (NM_007913, exon 1 of 2)","5' UTR (NM_007913, exon 1 of 2)",250,"NM_007913",13653,"Mm.181959","NM_007913",null,"Egr1","A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr","early growth response 1","protein-coding"]
[1181,"chr15",83526488,83527530,"+",0,"NA","intron (NM_007546, intron 1 of 4)","CpG",147,"NM_007546",12124,"Mm.267006","NM_007546","ENSMUSG00000016758","Bik","Biklk|Blk|Nbk","BCL2-interacting killer","protein-coding"]
[1809,"chr2",26352260,26352880,"+",0,"NA","promoter-TSS (NM_001139504)","promoter-TSS (NM_001139504)",-460,"NM_001139504",52838,"Mm.31239","NM_026828","ENSMUSG00000075467","Dnlz","1110034G11Rik|D2Bwg1335e|HEP1","DNL-type zinc finger","protein-coding"]
[803,"chr12",101975363,101976475,"+",0,"NA","promoter-TSS (NM_016856)","promoter-TSS (NM_016856)",-55,"NM_016856",51786,"Mm.716","NM_016856","ENSMUSG00000041781","Cpsf2","100kDa|2610024B04Rik|AI662483|Cpsf|MCPSF|mKIAA1367","cleavage and polyadenylation specific factor 2","protein-coding"]
[2744,"chr6",39117839,39118905,"+",0,"NA","promoter-TSS (NR_045813)","promoter-TSS (NR_045813)",-23,"NM_172893",243771,"Mm.268462","NM_172893","ENSMUSG00000038507","Parp12","9930021O16|AA409132|AA536654|ARTD12|PARP-12|Zc3hdc1","poly (ADP-ribose) polymerase family, member 12","protein-coding"]
[2559,"chr5",92137795,92138510,"+",0,"NA","exon (NM_019490, exon 1 of 24)","exon (NM_019490, exon 1 of 24)",214,"NM_019490",56041,"Mm.15868","NM_019490","ENSMUSG00000029407","Uso1","115kDa|TAP|Vdp","USO1 vesicle docking factor","protein-coding"]
[3199,"chr8",84867197,84867978,"+",0,"NA","promoter-TSS (NR_106037)","promoter-TSS (NR_106037)",-360,"NR_106037",102466220,null,"NR_106037","ENSMUSG00000098331","Mir7069","Gm27777|mmu-mir-7069","microRNA 7069","ncRNA"]
[3378,"chr9",56089732,56090452,"+",0,"NA","5' UTR (NM_011193, exon 1 of 15)","5' UTR (NM_011193, exon 1 of 15)",116,"NM_011193",19200,"Mm.2534","NM_011193","ENSMUSG00000032322","Pstpip1","CD2BP1|def-2","proline-serine-threonine phosphatase-interacting protein 1","protein-coding"]
[1766,"chr19",57610515,57611870,"+",0,"NA","5' UTR (NM_181415, exon 1 of 29)","5' UTR (NM_181415, exon 1 of 29)",158,"NM_181415",226255,"Mm.245340","NM_181415","ENSMUSG00000054843","Atrnl1","AI504415|AW555641|Alp|Atrnl|Atrnlp","attractin like 1","protein-coding"]
[60,"chr1",75142331,75143360,"+",0,"NA","promoter-TSS (NM_001305232)","promoter-TSS (NM_001305232)",59,"NM_001305231",227298,"Mm.273062","NM_170755","ENSMUSG00000049339","Fam134a","-","family with sequence similarity 134, member A","protein-coding"]
[1245,"chr16",10479983,10480457,"+",0,"NA","exon (NM_001243760, exon 1 of 19)","exon (NM_001243760, exon 1 of 19)",148,"NM_001302618",12265,"Mm.249560","NM_007575","ENSMUSG00000022504","Ciita","C2ta|EG669998|Gm9475|Mhc2ta","class II transactivator","protein-coding"]
[1400,"chr17",25843882,25844743,"+",0,"NA","TTS (NM_001163766)","TTS (NM_001163766)",539,"NM_145999",214952,"Mm.40907","NM_145999","ENSMUSG00000025733","Rhot2","Arht2|Miro2","ras homolog gene family, member T2","protein-coding"]
[1067,"chr14",99298316,99299568,"+",0,"NA","5' UTR (NM_009769, exon 1 of 4)","5' UTR (NM_009769, exon 1 of 4)",251,"NM_009769",12224,"Mm.30262","NM_009769","ENSMUSG00000005148","Klf5","4930520J07Rik|Bteb2|CKLF|IKLF","Kruppel-like factor 5","protein-coding"]
[691,"chr11",119602860,119603629,"+",0,"NA","5' UTR (NM_001306081, exon 1 of 33)","5' UTR (NM_001306081, exon 1 of 33)",339,"NM_028898",74370,"Mm.209933","NM_028898","ENSMUSG00000025583","Rptor","4932417H02Rik|Rap|Raptor|mKIAA1303","regulatory associated protein of MTOR, complex 1","protein-coding"]
[2615,"chr5",118244729,118245441,"+",0,"NA","promoter-TSS (NM_172998)","promoter-TSS (NM_172998)",-60,"NM_001109902",269695,"Mm.320042","NM_172998","ENSMUSG00000032850","Rnft2","AW049082|B830028P19Rik|Tmem118","ring finger protein, transmembrane 2","protein-coding"]
[1676,"chr19",7493954,7495095,"+",0,"NA","promoter-TSS (NM_146091)","promoter-TSS (NM_146091)",86,"NM_146091",109168,"Mm.264016","NM_146091","ENSMUSG00000024759","Atl3","4633402C03Rik|5730596K20Rik|AI465397|AW228836","atlastin GTPase 3","protein-coding"]
[1388,"chr17",24896265,24896948,"+",0,"NA","TTS (NM_023260)","TTS (NM_023260)",106,"NM_019730",79059,"Mm.430765","NM_019730","ENSMUSG00000073435","Nme3","1810009F08Rik|AI413736|DR-nm23|Ndk3|Nm23-DR|Nm23-M3","NME/NM23 nucleoside diphosphate kinase 3","protein-coding"]
[3153,"chr8",61487560,61488266,"+",0,"NA","exon (NM_145595, exon 1 of 5)","exon (NM_145595, exon 1 of 5)",179,"NM_145595",234309,"Mm.29059","NM_145595","ENSMUSG00000031641","Cbr4","A730083J17Rik|BC009118","carbonyl reductase 4","protein-coding"]
[3134,"chr8",31111422,31112382,"+",0,"NA","promoter-TSS (NM_175136)","promoter-TSS (NM_175136)",56,"NM_175136",68867,"Mm.29532","NM_175136","ENSMUSG00000039328","Rnf122","1110063C11Rik","ring finger protein 122","protein-coding"]
[346,"chr10",115384660,115385922,"+",0,"NA","promoter-TSS (NM_025780)","promoter-TSS (NM_025780)",332,"NM_001033261",216345,"Mm.207621","NM_001033261","ENSMUSG00000034163","Zfc3h1","BC033596|Ccdc131|Psrc2","zinc finger, C3H1-type containing","protein-coding"]
[3085,"chr7",141338488,141339477,"+",0,"NA","promoter-TSS (NM_133191)","promoter-TSS (NM_133191)",-20,"NM_133191",98845,"Mm.27451","NM_133191","ENSMUSG00000025504","Eps8l2","AI042819|AW545405|Eps8r2","EPS8-like 2","protein-coding"]
[911,"chr13",56702831,56703500,"+",0,"NA","promoter-TSS (NM_001164042)","promoter-TSS (NM_001164042)",113,"NM_001164041",17129,"Mm.272920","NM_008541","ENSMUSG00000021540","Smad5","1110051M15Rik|AI451355|Dwf-C|Madh5|MusMLP","SMAD family member 5","protein-coding"]
[3171,"chr8",70868005,70868749,"+",0,"NA","3' UTR (NM_026964, exon 5 of 5)","3' UTR (NM_026964, exon 5 of 5)",5113,"NM_026964",234388,"Mm.295791","NM_026964","ENSMUSG00000007721","Ccdc124","1810023B24Rik","coiled-coil domain containing 124","protein-coding"]
[427,"chr11",51967348,51968097,"+",0,"NA","promoter-TSS (NM_029976)","promoter-TSS (NM_029976)",91,"NM_029976",52626,"Mm.289456","NM_029976","ENSMUSG00000020392","Cdkn2aipnl","A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520","CDKN2A interacting protein N-terminal like","protein-coding"]
[2072,"chr2",180171200,180171949,"+",0,"NA","promoter-TSS (NM_019822)","promoter-TSS (NM_019822)",-14,"NM_019822",56436,"Mm.316654","NM_019822","ENSMUSG00000039041","Adrm1","1110063P18Rik|2510006J17Rik|AA408205|ARM-1|AU043535|Arm1|Gp110|Rpn13","adhesion regulating molecule 1","protein-coding"]
[3507,"chr9",122805545,122806107,"+",0,"NA","intron (NM_001013405, intron 1 of 10)","CpG",279,"NM_001013405",382117,"Mm.215892","NM_001013405","ENSMUSG00000046603","Tcaim","D9Ertd402e|Gm1129|TOAG-1","T cell activation inhibitor, mitochondrial","protein-coding"]
[3121,"chr8",13907293,13908246,"+",0,"NA","promoter-TSS (NM_025785)","promoter-TSS (NM_025785)",-37,"NM_025785",66822,"Mm.37950","NM_025785","ENSMUSG00000038365","Fbxo25","9130015I06Rik|AI649137|Fbx25","F-box protein 25","protein-coding"]
[82,"chr1",91249880,91250990,"+",0,"NA","5' UTR (NM_026454, exon 1 of 10)","5' UTR (NM_026454, exon 1 of 10)",116,"NM_026454",67921,"Mm.337238","NM_026454","ENSMUSG00000034343","Ube2f","2510010F15Rik|AI851109","ubiquitin-conjugating enzyme E2F (putative)","protein-coding"]
[3464,"chr9",108306417,108307018,"+",0,"NA","promoter-TSS (NM_133986)","promoter-TSS (NM_133986)",-80,"NM_001313961",11848,"Mm.757","NM_016802","ENSMUSG00000007815","Rhoa","Arha|Arha1|Arha2","ras homolog gene family, member A","protein-coding"]
[2202,"chr3",137623367,137624245,"+",0,"NA","5' UTR (NM_030143, exon 1 of 3)","5' UTR (NM_030143, exon 1 of 3)",134,"NM_030143",73284,"Mm.250841","NM_030143","ENSMUSG00000046818","Ddit4l","1700037B15Rik|1700108M02Rik|REDD2|RTP801L|Smhs1","DNA-damage-inducible transcript 4-like","protein-coding"]
[650,"chr11",108424939,108425775,"+",0,"NA","promoter-TSS (NM_029606)","promoter-TSS (NM_029606)",91,"NM_029606",76380,"Mm.344071","NM_029586","ENSMUSG00000020728","Cep112","1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351|Ccdc46|Macoco","centrosomal protein 112","protein-coding"]
[1154,"chr15",78913458,78914831,"+",0,"NA","exon (NM_020271, exon 1 of 2)","exon (NM_020271, exon 1 of 2)",225,"NM_020271",57028,"Mm.263169","NM_020271","ENSMUSG00000022436","Pdxp","1600027H05Rik|AB041662|PLPP","pyridoxal (pyridoxine, vitamin B6) phosphatase","protein-coding"]
[3427,"chr9",86466963,86467730,"+",0,"NA","intron (NM_177208, intron 1 of 38)","CpG",192,"NM_177208",320615,"Mm.245500","NM_177208","ENSMUSG00000034973","Dopey1","B130005I07Rik|BC035275|C130028L17|D9Ertd809e","dopey family member 1","protein-coding"]
[2624,"chr5",122284390,122285521,"+",0,"NA","intron (NM_177242, intron 1 of 5)","CpG",557,"NM_177242",320717,"Mm.489670","NM_177242","ENSMUSG00000038582","Pptc7","9130017A15Rik|AA672638|AI848390|TA-PP2C","PTC7 protein phosphatase homolog (S. cerevisiae)","protein-coding"]
[895,"chr13",51651409,51652096,"+",0,"NA","promoter-TSS (NM_029279)","promoter-TSS (NM_029279)",44,"NM_029279",75420,"Mm.275981","NM_029279","ENSMUSG00000035139","Secisbp2","2210413N07Rik|2810012K13Rik|SBP2","SECIS binding protein 2","protein-coding"]
[1763,"chr19",56722046,56723969,"+",0,"NA","exon (NM_007419, exon 1 of 1)","exon (NM_007419, exon 1 of 1)",635,"NM_007419",11554,"Mm.46797","NM_007419","ENSMUSG00000035283","Adrb1","Adrb-1|beta-AR","adrenergic receptor, beta 1","protein-coding"]
[2965,"chr7",80024714,80025851,"+",0,"NA","promoter-TSS (NM_175433)","promoter-TSS (NM_175433)",468,"NM_001146000",209225,"Mm.290925","NM_175433","ENSMUSG00000048897","Zfp710","5430400N05Rik|9830165K13|AI324798|Znf710","zinc finger protein 710","protein-coding"]
[69,"chr1",86045781,86046871,"+",0,"NA","exon (NM_001144992, exon 1 of 3)","exon (NM_001144992, exon 1 of 3)",463,"NM_001144992",72792,"Mm.54981","NM_001144992","ENSMUSG00000026227","2810459M11Rik","-","RIKEN cDNA 2810459M11 gene","protein-coding"]
[1910,"chr2",80315346,80316137,"+",0,"NA","5' UTR (NM_024181, exon 1 of 23)","5' UTR (NM_024181, exon 1 of 23)",275,"NM_024181",66861,"Mm.21762","NM_024181","ENSMUSG00000027006","Dnajc10","1200006L06Rik|D2Ertd706e|ERdj5|JPDI","DnaJ (Hsp40) homolog, subfamily C, member 10","protein-coding"]
[1157,"chr15",79030513,79031254,"+",0,"NA","promoter-TSS (NM_001161712)","promoter-TSS (NM_001161712)",9,"NM_001161712",26912,"Mm.237085","NM_013847","ENSMUSG00000006378","Gcat","AI526977|Kbl","glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)","protein-coding"]
[1470,"chr17",46247791,46248975,"+",0,"NA","promoter-TSS (NM_009085)","promoter-TSS (NM_009085)",303,"NM_145353",28064,"Mm.248769","NM_145353","ENSMUSG00000071074","Yipf3","C6orf109|D17Wsu94e|KLIP1","Yip1 domain family, member 3","protein-coding"]
[2762,"chr6",54326654,54327513,"+",0,"NA","promoter-TSS (NM_030024)","promoter-TSS (NM_030024)",71,"NM_030024",78004,"Mm.41984","NM_030024","ENSMUSG00000045725","Prr15","E130201N16Rik|G90","proline rich 15","protein-coding"]
[3076,"chr7",140845497,140846374,"+",0,"NA","promoter-TSS (NR_045717)","promoter-TSS (NR_045717)",-246,"NR_045717",78520,"Mm.405801","NR_045717","ENSMUSG00000099590","C330022C24Rik","-","RIKEN cDNA C330022C24 gene","ncRNA"]
[224,"chr10",45335408,45336204,"+",0,"NA","promoter-TSS (NM_024285)","promoter-TSS (NM_024285)",44,"NM_024285",23828,"Mm.332793","NM_024285","ENSMUSG00000071317","Bves","Pop1|Popdc1|mBVES","blood vessel epicardial substance","protein-coding"]
[3402,"chr9",65435743,65436246,"+",0,"NA","exon (NM_027134, exon 1 of 9)","exon (NM_027134, exon 1 of 9)",212,"NM_027134",69606,"Mm.287956","NM_027134","ENSMUSG00000059183","Mtfmt","2310020P08Rik","mitochondrial methionyl-tRNA formyltransferase","protein-coding"]
[3264,"chr8",114205622,114206166,"+",0,"NA","exon (NM_173016, exon 1 of 9)","exon (NM_173016, exon 1 of 9)",254,"NM_173016",270097,"Mm.334825","NM_173016","ENSMUSG00000046844","Vat1l","9430073I07|AI427515|mKIAA1576","vesicle amine transport protein 1 homolog-like (T. californica)","protein-coding"]
[2711,"chr5",144767822,144768918,"+",0,"NA","promoter-TSS (NM_001081362)","promoter-TSS (NM_001081362)",-422,"NM_001081362",100683,"Mm.273570","NM_001081362","ENSMUSG00000045482","Trrap","AI481500","transformation/transcription domain-associated protein","protein-coding"]
[3501,"chr9",121759671,121760722,"+",0,"NA","promoter-TSS (NR_033503)","promoter-TSS (NR_033503)",163,"NM_001166644",270210,"Mm.473702","NM_001166644","ENSMUSG00000013419","Zfp651","4732420M22Rik|BC030045|R74626","zinc finger protein 651","protein-coding"]
[2100,"chr3",38886666,38887600,"+",0,"NA","exon (NM_183221, exon 1 of 17)","exon (NM_183221, exon 1 of 17)",193,"NM_183221",329628,"Mm.316210","NM_183221","ENSMUSG00000046743","Fat4","6030410K14Rik|9430004M15","FAT tumor suppressor homolog 4 (Drosophila)","protein-coding"]
[1982,"chr2",131491449,131492643,"+",0,"NA","intron (NM_145533, intron 1 of 6)","CpG",184,"NM_001177838",228608,"Mm.136586","NM_145533","ENSMUSG00000027333","Smox","B130066H01Rik|PAO|PAOh1|SMO","spermine oxidase","protein-coding"]
[1006,"chr14",34219638,34220234,"+",0,"NA","promoter-TSS (NM_181529)","promoter-TSS (NM_181529)",-110,"NM_176931",319508,"Mm.228006","NM_176931","ENSMUSG00000041479","Syt15","CHR10SYT|E230025K04Rik|sytXV","synaptotagmin XV","protein-coding"]
[2393,"chr4",136424287,136425273,"+",0,"NA","intron (NM_001285484, intron 1 of 1)","CpG",168,"NM_001285484",15552,"Mm.40573","NM_008309","ENSMUSG00000070687","Htr1d","5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db","5-hydroxytryptamine (serotonin) receptor 1D","protein-coding"]
[3423,"chr9",78448016,78448831,"+",0,"NA","exon (NM_026658, exon 1 of 12)","exon (NM_026658, exon 1 of 12)",213,"NM_026658",68291,"Mm.291779","NM_026658","ENSMUSG00000032342","Mto1","2310039H01Rik|5730419A02Rik","mitochondrial translation optimization 1 homolog (S. cerevisiae)","protein-coding"]
[426,"chr11",51649862,51651122,"+",0,"NA","promoter-TSS (NR_027958)","promoter-TSS (NR_027958)",-462,"NR_027958",97775,"Mm.220299","NM_175289","ENSMUSG00000052563","D930048N14Rik","AI315703|R75254","RIKEN cDNA D930048N14 gene","ncRNA"]
[996,"chr14",31018955,31019607,"+",0,"NA","promoter-TSS (NM_153547)","promoter-TSS (NM_153547)",143,"NM_001081251",66923,"Mm.27913","NM_025847","ENSMUSG00000042323","Pbrm1","2610016F04Rik|AI507524|BAF180|Pb1","polybromo 1","protein-coding"]
[3222,"chr8",94771763,94772638,"+",0,"NA","promoter-TSS (NM_009142)","promoter-TSS (NM_009142)",20,"NM_009142",20312,"Mm.103711","NM_009142","ENSMUSG00000031778","Cx3cl1","AB030188|ABCD-3|AI848747|CX3C|Cxc3|D8Bwg0439e|Scyd1","chemokine (C-X3-C motif) ligand 1","protein-coding"]
[3005,"chr7",102267819,102268506,"+",0,"NA","5' UTR (NM_009287, exon 1 of 12)","5' UTR (NM_009287, exon 1 of 12)",338,"NM_009287",20866,"Mm.645","NM_009287","ENSMUSG00000030987","Stim1","SIM","stromal interaction molecule 1","protein-coding"]
[1435,"chr17",32402770,32403663,"+",0,"NA","exon (NM_178785, exon 1 of 17)","exon (NM_178785, exon 1 of 17)",202,"NR_029458",664702,"Mm.381066","NR_029458",null,"A530088E08Rik","-","RIKEN cDNA A530088E08 gene","ncRNA"]
[1840,"chr2",30844812,30846204,"+",0,"NA","exon (NM_009116, exon 1 of 4)","exon (NM_009116, exon 1 of 4)",141,"NM_009116",20204,"Mm.1802","NM_009116","ENSMUSG00000039476","Prrx2","Prx2|S8","paired related homeobox 2","protein-coding"]
[279,"chr10",80016492,80017233,"+",0,"NA","exon (NM_001142701, exon 1 of 23)","exon (NM_001142701, exon 1 of 23)",190,"NM_001142701",70719,"Mm.243954","NM_027521","ENSMUSG00000035697","Hmha1","6330406L22Rik|AW539505|Ha-1","histocompatibility (minor) HA-1","protein-coding"]
[2408,"chr4",139573852,139575872,"+",0,"NA","5' UTR (NM_001205173, exon 1 of 9)","5' UTR (NM_001205173, exon 1 of 9)",142,"NM_001205173",212632,"Mm.30464","NM_183148","ENSMUSG00000041025","Iffo2","C79267","intermediate filament family orphan 2","protein-coding"]
[2069,"chr2",179442136,179442973,"+",0,"NA","5' UTR (NM_001316723, exon 1 of 6)","5' UTR (NM_001316723, exon 1 of 6)",123,"NM_009867",12561,"Mm.184711","NM_009867","ENSMUSG00000000305","Cdh4","AW120700|R-CAD|R-Cadh|Rcad","cadherin 4","protein-coding"]
[956,"chr13",112800611,112801386,"+",0,"NA","5' UTR (NM_008903, exon 1 of 6)","5' UTR (NM_008903, exon 1 of 6)",221,"NM_008247",19012,"Mm.291029","NM_008247","ENSMUSG00000021759","Plpp1","Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|Ppap2a|mPAP","phospholipid phosphatase 1","protein-coding"]
[483,"chr11",69088293,69089273,"+",0,"NA","intron (NM_009497, intron 1 of 4)","CpG",255,"NM_009497",22318,"Mm.28643","NM_009497","ENSMUSG00000020894","Vamp2","Syb-2|Syb2|sybII","vesicle-associated membrane protein 2","protein-coding"]
[498,"chr11",70699749,70701054,"+",0,"NA","promoter-TSS (NM_001252484)","promoter-TSS (NM_001252484)",-147,"NM_153103",16562,"Mm.99996","NM_153103","ENSMUSG00000020821","Kif1c","B430105J22Rik|D11Bwg1349e|Ltxs1","kinesin family member 1C","protein-coding"]
[629,"chr11",103116270,103116790,"+",0,"NA","5' UTR (NM_138753, exon 1 of 1)","5' UTR (NM_138753, exon 1 of 1)",205,"NM_138753",192231,"Mm.8763","NM_138753","ENSMUSG00000048878","Hexim1","7330426E13Rik|CLP-1|Clp1|HIS1","hexamethylene bis-acetamide inducible 1","protein-coding"]
[3520,"chrX",94635964,94636615,"+",0,"NA","exon (NM_008179, exon 1 of 1)","exon (NM_008179, exon 1 of 1)",220,"NM_008179",14853,"Mm.20826","NM_008179","ENSMUSG00000071723","Gspt2","-","G1 to S phase transition 2","protein-coding"]
[2055,"chr2",167690540,167691362,"+",0,"NA","promoter-TSS (NR_015500)","promoter-TSS (NR_015500)",192,"NR_110334",329562,"Mm.123101","NM_177851","ENSMUSG00000006462","A530013C23Rik","-","RIKEN cDNA A530013C23 gene","ncRNA"]
[1487,"chr17",56303082,56303675,"+",0,"NA","promoter-TSS (NM_001111078)","promoter-TSS (NM_001111078)",41,"NM_001111079",18140,"Mm.42196","NM_010931","ENSMUSG00000001228","Uhrf1","AL022808|ICBP90|Np95|RNF106","ubiquitin-like, containing PHD and RING finger domains, 1","protein-coding"]
[372,"chr11",3289879,3291767,"+",0,"NA","exon (NM_001253691, exon 1 of 5)","exon (NM_001253691, exon 1 of 5)",366,"NM_019574",56218,"Mm.275563","NM_019574","ENSMUSG00000020453","Patz1","8430401L15Rik|AI447519|Mazr|Patz|Zfp278","POZ (BTB) and AT hook containing zinc finger 1","protein-coding"]
[2951,"chr7",64501665,64502595,"+",0,"NA","promoter-TSS (NM_001291167)","promoter-TSS (NM_001291167)",-8,"NM_001291166",11784,"Mm.4657","NM_007461","ENSMUSG00000030519","Apba2","X11-like|X11L|XllL|mXllL","amyloid beta (A4) precursor protein-binding, family A, member 2","protein-coding"]
[3204,"chr8",85299115,85300089,"+",0,"NA","promoter-TSS (NR_028268)","promoter-TSS (NR_028268)",-30,"NM_001163791",56452,"Mm.29709","NM_019716","ENSMUSG00000031697","Orc6","6720420I10Rik|Orc6l","origin recognition complex, subunit 6","protein-coding"]
[2028,"chr2",158794742,158795486,"+",0,"NA","intron (NM_145742, intron 1 of 20)","intron (NM_145742, intron 1 of 20)",307,"NM_001291144",71715,"Mm.315652","NM_145742","ENSMUSG00000027655","Dhx35","1200009D07Rik|Ddx35","DEAH (Asp-Glu-Ala-His) box polypeptide 35","protein-coding"]
[1540,"chr18",21651495,21652350,"+",0,"NA","exon (NM_001081403, exon 1 of 8)","exon (NM_001081403, exon 1 of 8)",357,"NM_001271580",74644,"Mm.329311","NM_001271580",null,"4930426D05Rik","-","RIKEN cDNA 4930426D05 gene","protein-coding"]
[3075,"chr7",140835047,140835948,"+",0,"NA","promoter-TSS (NM_029821)","promoter-TSS (NM_029821)",1,"NM_029821",76974,"Mm.272359","NM_029821","ENSMUSG00000025481","Urah","1190003J15Rik|2810420C16Rik","urate (5-hydroxyiso-) hydrolase","protein-coding"]
[1661,"chr19",6340949,6341634,"+",0,"NA","TTS (NM_001168488)","TTS (NM_001168488)",131,"NR_117093",26412,"Mm.25860","NM_009006","ENSMUSG00000024948","Map4k2","AI385662|BL44|GCK|Rab8ip","mitogen-activated protein kinase kinase kinase kinase 2","protein-coding"]
[1330,"chr16",72662964,72663932,"+",0,"NA","5' UTR (NM_019413, exon 1 of 29)","5' UTR (NM_019413, exon 1 of 29)",299,"NM_019413",19876,"Mm.310772","NM_019413","ENSMUSG00000022883","Robo1","AW494633|AW742721|DUTT1|Gm310","roundabout homolog 1 (Drosophila)","protein-coding"]
[1284,"chr16",20516671,20517556,"+",0,"NA","promoter-TSS (NM_007889)","promoter-TSS (NM_007889)",49,"NM_007889",13544,"Mm.247259","NM_007889","ENSMUSG00000003233","Dvl3","-","dishevelled 3, dsh homolog (Drosophila)","protein-coding"]
[3041,"chr7",126975901,126977059,"+",0,"NA","5' UTR (NM_026638, exon 1 of 6)","5' UTR (NM_026638, exon 1 of 6)",566,"NM_026638",52858,"Mm.28219","NM_026638","ENSMUSG00000030682","Cdipt","9530042F15Rik|D7Bwg0575e|Pis|Pis1","CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)","protein-coding"]
[1606,"chr18",74442202,74443192,"+",0,"NA","promoter-TSS (NM_201600)","promoter-TSS (NM_201600)",78,"NM_201600",17919,"Mm.260098","NM_008661","ENSMUSG00000025885","Myo5b","AI661750|mKIAA1119","myosin VB","protein-coding"]
[2064,"chr2",174109802,174111122,"+",0,"NA","exon (NM_213733, exon 1 of 12)","exon (NM_213733, exon 1 of 12)",111,"NM_213733",228961,"Mm.295629","NM_213733","ENSMUSG00000039263","Npepl1","BC023239|C85514|mKIAA1974","aminopeptidase-like 1","protein-coding"]
[1160,"chr15",79229055,79229805,"+",0,"NA","promoter-TSS (NM_001045558)","promoter-TSS (NM_001045558)",48,"NM_001045558",18693,"Mm.259464","NM_008837","ENSMUSG00000068206","Pick1","Prkcabp","protein interacting with C kinase 1","protein-coding"]
[99,"chr1",118627599,118628498,"+",0,"NA","exon (NM_023755, exon 1 of 15)","exon (NM_023755, exon 1 of 15)",103,"NM_023755",81879,"Mm.24621","NM_023755","ENSMUSG00000026380","Tfcp2l1","1810030F05Rik|4932442M07Rik|AA575098|Cp2l1|Crtr-1|D930018N21Rik|LBP-9|Tcfcp2l1","transcription factor CP2-like 1","protein-coding"]
[869,"chr13",34651416,34653257,"+",0,"NA","promoter-TSS (NR_105041)","promoter-TSS (NR_105041)",345,"NM_025831",66895,"Mm.28943","NM_025831","ENSMUSG00000021411","Pxdc1","1300014I06Rik","PX domain containing 1","protein-coding"]
[1592,"chr18",64887350,64888632,"+",0,"NA","5' UTR (NM_001114386, exon 1 of 31)","5' UTR (NM_001114386, exon 1 of 31)",235,"NM_001114386",83814,"Mm.98668","NM_031881","ENSMUSG00000024589","Nedd4l","1300012C07Rik|Nedd4-2|Nedd4b","neural precursor cell expressed, developmentally down-regulated gene 4-like","protein-coding"]
[1933,"chr2",109917536,109918446,"+",0,"NA","5' UTR (NM_172671, exon 1 of 18)","5' UTR (NM_172671, exon 1 of 18)",344,"NM_172671",107515,"Mm.277351","NM_172671","ENSMUSG00000050199","Lgr4","9130225G07|A330106J01Rik|A930009A08Rik|Gpr48","leucine-rich repeat-containing G protein-coupled receptor 4","protein-coding"]
[2022,"chr2",158028083,158029135,"+",0,"NA","5' UTR (NM_027434, exon 1 of 7)","5' UTR (NM_027434, exon 1 of 7)",112,"NM_001291135",70470,"Mm.290810","NM_027434","ENSMUSG00000027651","Rprd1b","2610304G08Rik|2810446G03Rik|Crept","regulation of nuclear pre-mRNA domain containing 1B","protein-coding"]
[790,"chr12",85598448,85600123,"+",0,"NA","promoter-TSS (NM_001205053)","promoter-TSS (NM_001205053)",-131,"NM_030887",81703,"Mm.103560","NM_030887","ENSMUSG00000034271","Jdp2","Jundm2|Jundp2|TIF","Jun dimerization protein 2","protein-coding"]
[533,"chr11",77982422,77983143,"+",0,"NA","promoter-TSS (NM_174852)","promoter-TSS (NM_174852)",-34,"NM_174852",268448,"Mm.274329","NM_174852","ENSMUSG00000037791","Phf12","2410142K10Rik|F630045O13|PF1|mKIAA1523","PHD finger protein 12","protein-coding"]
[2080,"chr2",181219470,181220245,"+",0,"NA","promoter-TSS (NM_199312)","promoter-TSS (NM_199312)",-159,"NM_199312",332713,"Mm.23349","NM_199312","ENSMUSG00000047841","BC051628","1700026M20Rik","cDNA sequence BC051628","protein-coding"]
[1122,"chr15",73512559,73513112,"+",0,"NA","exon (NM_001081066, exon 1 of 23)","exon (NM_001081066, exon 1 of 23)",275,"NM_001081066",105841,"Mm.322557","NM_001081066","ENSMUSG00000036661","Dennd3","AI447457|E030003N15Rik","DENN/MADD domain containing 3","protein-coding"]
[2997,"chr7",100492709,100493586,"+",0,"NA","promoter-TSS (NM_011671)","promoter-TSS (NM_011671)",-211,"NM_011671",22228,"Mm.171378","NM_011671",null,"Ucp2","Slc25a8","uncoupling protein 2 (mitochondrial, proton carrier)","protein-coding"]
[2416,"chr4",141545839,141547123,"+",0,"NA","non-coding (NR_030695, exon 1 of 1)","non-coding (NR_030695, exon 1 of 1)",319,"NR_030695",320456,"Mm.32859","NM_177163",null,"B330016D10Rik","-","RIKEN cDNA B330016D10 gene","ncRNA"]
[1697,"chr19",17394006,17394599,"+",0,"NA","5' UTR (NM_019437, exon 1 of 4)","5' UTR (NM_019437, exon 1 of 4)",259,"NM_019437",54391,"Mm.7013","NM_019437","ENSMUSG00000024712","Rfk","0610038L10Rik|AF031381|KOI-4","riboflavin kinase","protein-coding"]
[1053,"chr14",73552602,73553263,"+",0,"NA","intron (NM_011506, intron 1 of 10)","CpG",146,"NM_011506",20916,"Mm.38951","NM_011506","ENSMUSG00000022110","Sucla2","4930547K18Rik","succinate-Coenzyme A ligase, ADP-forming, beta subunit","protein-coding"]
[414,"chr11",45851747,45852593,"+",0,"NA","exon (NM_001045520, exon 1 of 12)","exon (NM_001045520, exon 1 of 12)",206,"NM_001045520",216705,"Mm.169673","NM_001045520","ENSMUSG00000006169","Clint1","AI642036|AW537616|C530049I24Rik|Enth|Epn4|F630206G17Rik|mKIAA0171","clathrin interactor 1","protein-coding"]
[462,"chr11",60728257,60728789,"+",0,"NA","promoter-TSS (NR_039559)","promoter-TSS (NR_039559)",125,"NM_001009927",237781,"Mm.339760","NM_001009927","ENSMUSG00000018599","Mief2","AI482195|Gm11|Smcr7","mitochondrial elongation factor 2","protein-coding"]
[1770,"chr2",3118116,3118922,"+",0,"NA","5' UTR (NM_001081161, exon 1 of 8)","5' UTR (NM_001081161, exon 1 of 8)",131,"NM_001081161",269233,"Mm.23044","NM_001081161","ENSMUSG00000050530","Fam171a1","9630050M13Rik|AA409679","family with sequence similarity 171, member A1","protein-coding"]
[2735,"chr6",29059729,29060278,"+",0,"NA","promoter-TSS (NM_008493)","promoter-TSS (NM_008493)",-218,"NM_008493",16846,"Mm.277072","NM_008493","ENSMUSG00000059201","Lep","ob|obese","leptin","protein-coding"]
[1209,"chr15",98634163,98634952,"+",0,"NA","promoter-TSS (NM_007581)","promoter-TSS (NM_007581)",-210,"NM_007581",12297,"Mm.3544","NM_007581","ENSMUSG00000003352","Cacnb3","Beta3|CAB3|Ca(v)beta3|Cchb3","calcium channel, voltage-dependent, beta 3 subunit","protein-coding"]
[263,"chr10",78425548,78426166,"+",0,"NA","exon (NM_007793, exon 1 of 3)","exon (NM_007793, exon 1 of 3)",187,"NM_007793",13014,"Mm.6095","NM_007793","ENSMUSG00000005054","Cstb","AA960480|Stfb","cystatin B","protein-coding"]
[991,"chr14",30548922,30549698,"+",0,"NA","exon (NM_009388, exon 1 of 14)","exon (NM_009388, exon 1 of 14)",179,"NM_009388",21881,"Mm.290692","NM_009388","ENSMUSG00000021957","Tkt","p68","transketolase","protein-coding"]
[3361,"chr9",46273034,46273924,"+",0,"NA","exon (NM_011752, exon 2 of 14)","exon (NM_011752, exon 2 of 14)",415,"NM_011752",22687,"Mm.17519","NM_011752","ENSMUSG00000032078","Zpr1","AI303781|Zfp259|Znf259","ZPR1 zinc finger","protein-coding"]
[2985,"chr7",97081646,97082445,"+",0,"NA","intron (NM_001162477, intron 1 of 9)","CpG",294,"NM_010248",14389,"Mm.42033","NM_010248","ENSMUSG00000004508","Gab2","AI463667|D130058I17Rik|p97","growth factor receptor bound protein 2-associated protein 2","protein-coding"]
[2348,"chr4",126556687,126557394,"+",0,"NA","promoter-TSS (NM_175554)","promoter-TSS (NM_175554)",60,"NM_175554",269582,"Mm.243962","NM_175554","ENSMUSG00000042489","Clspn","B130025E01|C85083|E130314M08Rik","claspin","protein-coding"]
[931,"chr13",76383780,76385399,"+",0,"NA","promoter-TSS (NM_030174)","promoter-TSS (NM_030174)",-372,"NM_030174",78771,"Mm.316249","NM_030174",null,"Mctp1","2810465F10Rik","multiple C2 domains, transmembrane 1","protein-coding"]
[2246,"chr4",33923614,33924857,"+",0,"NA","promoter-TSS (NM_007726)","promoter-TSS (NM_007726)",-397,"NM_007726",12801,"Mm.7992","NM_007726","ENSMUSG00000044288","Cnr1","CB-R|CB1|CB1R","cannabinoid receptor 1 (brain)","protein-coding"]
[615,"chr11",101119303,101120391,"+",0,"NA","promoter-TSS (NM_026501)","promoter-TSS (NM_026501)",-4,"NM_028933",67998,"Mm.33881","NM_026501","ENSMUSG00000017802","Fam134c","1300010M03Rik|4933404C01Rik|AI551748","family with sequence similarity 134, member C","protein-coding"]
[476,"chr11",68555809,68556700,"+",0,"NA","promoter-TSS (NM_146004)","promoter-TSS (NM_146004)",68,"NM_146004",215723,"Mm.131205","NM_146004","ENSMUSG00000048329","Mfsd6l","-","major facilitator superfamily domain containing 6-like","protein-coding"]
[1198,"chr15",89122509,89123714,"+",0,"NA","promoter-TSS (NM_001163319)","promoter-TSS (NM_001163319)",39,"NM_001163319",328580,"Mm.380934","NM_001163319","ENSMUSG00000051786","Tubgcp6","AI843275|D430023H11|mKIAA1669","tubulin, gamma complex associated protein 6","protein-coding"]
[3319,"chr9",14276129,14277140,"+",0,"NA","intron (NM_030261, intron 1 of 9)","CpG",333,"NM_030261",75747,"Mm.325126","NM_030261","ENSMUSG00000032009","Sesn3","5630400E15Rik|BC003348|SEST3","sestrin 3","protein-coding"]
[3210,"chr8",88521024,88521793,"+",0,"NA","promoter-TSS (NM_027280)","promoter-TSS (NM_027280)",64,"NM_027280",93960,"Mm.30219","NM_027280","ENSMUSG00000031661","Nkd1","2810434J10Rik|9030215G15Rik|Nkd","naked cuticle 1 homolog (Drosophila)","protein-coding"]
[1626,"chr19",3999861,4001099,"+",0,"NA","promoter-TSS (NM_025529)","promoter-TSS (NM_025529)",-100,"NM_025529",66387,"Mm.259222","NM_025529","ENSMUSG00000024869","Nudt8","2310039H17Rik","nudix (nucleoside diphosphate linked moiety X)-type motif 8","protein-coding"]
[1409,"chr17",27188892,27190115,"+",0,"NA","TTS (NM_146075)","TTS (NM_146075)",14935,"NM_146075",224640,"Mm.29689","NM_146075","ENSMUSG00000044857","Lemd2","BC026588|Lem2|NET25","LEM domain containing 2","protein-coding"]
[2219,"chr3",152209841,152211270,"+",0,"NA","promoter-TSS (NM_057172)","promoter-TSS (NM_057172)",97,"NM_057172",51886,"Mm.278922","NM_057172","ENSMUSG00000028034","Fubp1","9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4","far upstream element (FUSE) binding protein 1","protein-coding"]
[2141,"chr3",88553287,88553756,"+",0,"NA","promoter-TSS (NM_031248)","promoter-TSS (NM_031248)",-195,"NM_033526",94232,"Mm.303059","NM_033526","ENSMUSG00000008604","Ubqln4","A1Up|A1u|AI663987|CIP75|UBIN","ubiquilin 4","protein-coding"]
[2464,"chr4",156235767,156236476,"+",0,"NA","intron (NM_021303, intron 1 of 18)","CpG",111,"NM_021303",57741,"Mm.423051","NM_021303","ENSMUSG00000095567","Noc2l","AA410003|AF155546|NIR","nucleolar complex associated 2 homolog (S. cerevisiae)","protein-coding"]
[1077,"chr14",122106767,122107780,"+",0,"NA","promoter-TSS (NR_015586)","promoter-TSS (NR_015586)",191,"NM_080556",68059,"Mm.275191","NM_080556","ENSMUSG00000025544","Tm9sf2","1500001N15Rik|AA536814|D14Ertd64e|P76","transmembrane 9 superfamily member 2","protein-coding"]
[1716,"chr19",30029835,30030550,"+",0,"NA","promoter-TSS (NM_144873)","promoter-TSS (NM_144873)",-321,"NM_144873",109113,"Mm.313364","NM_144873","ENSMUSG00000024817","Uhrf2","2310065A22Rik|AI426270|AW214556|D130071B19Rik|Nirf","ubiquitin-like, containing PHD and RING finger domains 2","protein-coding"]
[293,"chr10",80602682,80603275,"+",0,"NA","promoter-TSS (NM_001100606)","promoter-TSS (NM_001100606)",96,"NM_019575",56214,"Mm.273170","NM_019575","ENSMUSG00000078441","Scamp4","2410022D05Rik|AI448940|AU022392|AW742369|Sc4","secretory carrier membrane protein 4","protein-coding"]
[2854,"chr6",134640900,134641453,"+",0,"NA","5' UTR (NM_026371, exon 1 of 4)","5' UTR (NM_026371, exon 1 of 4)",236,"NM_026371",67774,"Mm.41892","NM_026371","ENSMUSG00000042992","Borcs5","5830457J20Rik|AW124643|Loh12cr1","BLOC-1 related complex subunit 5","protein-coding"]
[1272,"chr16",18066330,18066981,"+",0,"NA","intron (NR_110380, intron 1 of 4)","CpG",252,"NM_001289813",13353,"Mm.27155","NM_010047","ENSMUSG00000003531","Dgcr6","-","DiGeorge syndrome critical region gene 6","protein-coding"]
[1781,"chr2",14073488,14074486,"+",0,"NA","promoter-TSS (NM_011484)","promoter-TSS (NM_011484)",-53,"NR_038162",70957,"Mm.399049","NR_038162","ENSMUSG00000086657","Stamos","4921530L18Rik","signal transducing adaptor molecule (SH3 domain and ITAM motif) 1, opposite strand","ncRNA"]
[1299,"chr16",32332028,32333044,"+",0,"NA","intron (NM_177633, intron 1 of 10)","CpG",284,"NM_177633",224111,"Mm.31275","NM_177633","ENSMUSG00000053774","Ubxn7","A630090P18|AI196514|Ubxd7|mKIAA0794","UBX domain protein 7","protein-coding"]
[1663,"chr19",6418151,6418999,"+",0,"NA","promoter-TSS (NM_001205234)","promoter-TSS (NM_001205234)",-163,"NM_001205235",18190,"Mm.329616","NM_020253","ENSMUSG00000033768","Nrxn2","6430591O13Rik|mKIAA0921","neurexin II","protein-coding"]
[2888,"chr7",24884159,24885340,"+",0,"NA","promoter-TSS (NM_023133)","promoter-TSS (NM_023133)",35,"NM_023133",20085,"Mm.300281","NM_023133","ENSMUSG00000040952","Rps19","Dsk3","ribosomal protein S19","protein-coding"]
[967,"chr14",11553191,11554217,"+",0,"NA","5' UTR (NM_008981, exon 1 of 30)","5' UTR (NM_008981, exon 1 of 30)",151,"NM_008981",19270,"Mm.431266","NM_008981","ENSMUSG00000021745","Ptprg","5430405N12Rik|AW046354|AW549872|RPTPgamma","protein tyrosine phosphatase, receptor type, G","protein-coding"]
[2157,"chr3",95314737,95315894,"+",0,"NA","promoter-TSS (NM_029789)","promoter-TSS (NM_029789)",63,"NM_029789",76893,"Mm.181009","NM_029789","ENSMUSG00000015714","Cers2","0610013I17Rik|AI225939|Lass2|TRH3","ceramide synthase 2","protein-coding"]
[1611,"chr18",75819973,75820956,"+",0,"NA","intron (NM_145356, intron 1 of 4)","CpG",286,"NM_145356",207259,"Mm.159332","NM_145356","ENSMUSG00000044646","Zbtb7c","B230208J24Rik|Kr-pok|Zbtb36","zinc finger and BTB domain containing 7C","protein-coding"]
[322,"chr10",88885731,88886553,"+",0,"NA","5' UTR (NM_145423, exon 1 of 15)","5' UTR (NM_145423, exon 1 of 15)",150,"NM_145423",216225,"Mm.77381","NM_145423","ENSMUSG00000020062","Slc5a8","Ait|SMCT","solute carrier family 5 (iodide transporter), member 8","protein-coding"]
[469,"chr11",62281031,62281920,"+",0,"NA","promoter-TSS (NM_027198)","promoter-TSS (NM_027198)",2,"NM_029704",72795,"Mm.489722","NM_028360","ENSMUSG00000042298","Ttc19","2010204O13Rik|2810460C24Rik|AI505442","tetratricopeptide repeat domain 19","protein-coding"]
[3046,"chr7",127707801,127709091,"+",0,"NA","promoter-TSS (NR_030428)","promoter-TSS (NR_030428)",-41,"NR_030428",791073,null,"NR_030428","ENSMUSG00000076454","Mir762","Mirn762|mir-762|mmu-mir-762","microRNA 762","ncRNA"]
[635,"chr11",103773420,103774476,"+",0,"NA","promoter-TSS (NM_009521)","promoter-TSS (NM_009521)",-227,"NM_009521",22415,"Mm.159091","NM_009521","ENSMUSG00000000125","Wnt3","Int-4|Wnt-3","wingless-type MMTV integration site family, member 3","protein-coding"]
[1088,"chr15",12204893,12205789,"+",0,"NA","intron (NM_172958, intron 1 of 15)","CpG",247,"NM_172958",268783,"Mm.54460","NM_172958","ENSMUSG00000039458","Mtmr12","3Pap|4932703C11|C730015A02Rik|Pip3ap|mKIAA1682","myotubularin related protein 12","protein-coding"]
[575,"chr11",88193358,88194113,"+",0,"NA","promoter-TSS (NM_001291270)","promoter-TSS (NM_001291270)",-371,"NM_001291270",64656,"Mm.168680","NM_024174","ENSMUSG00000023723","Mrps23","D11Bwg1153e|MRP-S23|Rpms23|S23mt","mitochondrial ribosomal protein S23","protein-coding"]
[1835,"chr2",30285578,30286955,"+",0,"NA","promoter-TSS (NM_177648)","promoter-TSS (NM_177648)",88,"NM_177648",227697,"Mm.26690","NM_177648","ENSMUSG00000075419","Dolk","BC026973|Tmem15|mKIAA1094","dolichol kinase","protein-coding"]
[1566,"chr18",37143715,37144846,"+",0,"NA","exon (NM_001003672, exon 1 of 4)","exon (NM_001003672, exon 1 of 4)",311,"NM_001003672",353237,"Mm.308500","NM_001003672","ENSMUSG00000007440","Pcdhac2","CNRc2","protocadherin alpha subfamily C, 2","protein-coding"]
[979,"chr14",21750510,21751261,"+",0,"NA","intron (NM_026283, intron 1 of 5)","CpG",354,"NM_026283",67630,"Mm.102765","NM_026283","ENSMUSG00000021770","Samd8","1110053F04Rik|1700010P07Rik|SMSr","sterile alpha motif domain containing 8","protein-coding"]
[709,"chr11",121160187,121161083,"+",0,"NA","exon (NM_145440, exon 1 of 1)","exon (NM_145440, exon 1 of 1)",364,"NM_145440",217369,"Mm.20122","NM_145440","ENSMUSG00000039321","Uts2r","Gpr14|UR-2-R|UTR|UTR2","urotensin 2 receptor","protein-coding"]
[40,"chr1",58652600,58653037,"+",0,"NA","intron (NR_045007, intron 1 of 1)","intron (NR_045007, intron 1 of 1)",177,"NR_045007",100504501,"Mm.440933","NR_045007","ENSMUSG00000102059","Gm20257","-","caspase 8 pseudogene","pseudo"]
[310,"chr10",82858865,82859526,"+",0,"NA","promoter-TSS (NM_015762)","promoter-TSS (NM_015762)",-11,"NM_001042513",50493,"Mm.210155","NM_015762","ENSMUSG00000020250","Txnrd1","TR|TR1|TrxR1","thioredoxin reductase 1","protein-coding"]
[192,"chr10",13008324,13009126,"+",0,"NA","exon (NM_175102, exon 1 of 1)","exon (NM_175102, exon 1 of 1)",275,"NM_175102",66125,"Mm.29743","NM_175102",null,"Sf3b5","10kDa|1110005L13Rik|AU043053|Sf3b10","splicing factor 3b, subunit 5","protein-coding"]
[699,"chr11",120491763,120492589,"+",0,"NA","intron (NM_013770, intron 1 of 10)","CpG",339,"NM_013770",27376,"Mm.3991","NM_013770",null,"Slc25a10","Dic","solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10","protein-coding"]
[1115,"chr15",59373796,59374517,"+",0,"NA","promoter-TSS (NM_001164604)","promoter-TSS (NM_001164604)",-4,"NM_153548",223593,"Mm.218665","NM_153548","ENSMUSG00000022350","E430025E21Rik","AL022848|C76463|Kiaa0196|mKIAA0196|strumpellin","RIKEN cDNA E430025E21 gene","protein-coding"]
[960,"chr13",117220537,117221416,"+",0,"NA","intron (NM_010330, intron 1 of 8)","CpG",403,"NM_010330",13723,"Mm.274926","NM_010330","ENSMUSG00000021728","Emb","AL022799|Gp70","embigin","protein-coding"]
[818,"chr12",108410498,108411283,"+",0,"NA","intron (NM_001043336, intron 1 of 21)","intron (NM_001043336, intron 1 of 21)",257,"NM_001286347",68519,"Mm.236645","NM_001043335","ENSMUSG00000058070","Eml1","1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco","echinoderm microtubule associated protein like 1","protein-coding"]
[2363,"chr4",129959620,129960471,"+",0,"NA","promoter-TSS (NR_040648)","promoter-TSS (NR_040648)",-329,"NR_040647",72225,"Mm.102193","NR_040647",null,"1700003M07Rik","-","RIKEN cDNA 1700003M07 gene","ncRNA"]
[1038,"chr14",62331939,62332479,"+",0,"NA","intron (NM_026001, intron 1 of 10)","CpG",104,"NM_026001",67153,"Mm.26040","NM_026001","ENSMUSG00000021932","Rnaseh2b","1110019N06Rik|2610207P08Rik|Dleu8","ribonuclease H2, subunit B","protein-coding"]
[2908,"chr7",29303639,29304478,"+",0,"NA","promoter-TSS (NM_013874)","promoter-TSS (NM_013874)",53,"NM_013874",29861,"Mm.101885","NM_013874","ENSMUSG00000030584","Dpf1","Neud4","D4, zinc and double PHD fingers family 1","protein-coding"]
[2293,"chr4",86748265,86749329,"+",0,"NA","5' UTR (NM_184088, exon 1 of 32)","5' UTR (NM_184088, exon 1 of 32)",242,"NM_184088",329877,"Mm.273718","NM_184088","ENSMUSG00000038024","Dennd4c","1700065A05Rik|AA420392","DENN/MADD domain containing 4C","protein-coding"]
[1707,"chr19",23758124,23759329,"+",0,"NA","promoter-TSS (NM_177034)","promoter-TSS (NM_177034)",-150,"NM_177034",319924,"Mm.22879","NM_177034","ENSMUSG00000024897","Apba1","6430513E09Rik|Lin-10|Mint|Mint1|Urop11|X11|X11alpha","amyloid beta (A4) precursor protein binding, family A, member 1","protein-coding"]
[3103,"chr8",4226391,4227301,"+",0,"NA","promoter-TSS (NM_028175)","promoter-TSS (NM_028175)",19,"NM_028175",72267,"Mm.25479","NM_028175","ENSMUSG00000046589","Lrrc8e","1810049O03Rik|C87354","leucine rich repeat containing 8 family, member E","protein-coding"]
[267,"chr10",79681621,79682488,"+",0,"NA","promoter-TSS (NM_177613)","promoter-TSS (NM_177613)",-141,"NM_177613",216150,"Mm.21981","NM_177613","ENSMUSG00000020307","Cdc34","AI327276|UBE2R1","cell division cycle 34","protein-coding"]
[543,"chr11",78343306,78343844,"+",0,"NA","promoter-TSS (NM_011676)","promoter-TSS (NM_011676)",80,"NM_011676",22248,"Mm.284811","NM_011676","ENSMUSG00000002058","Unc119","D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h","unc-119 homolog (C. elegans)","protein-coding"]
[3088,"chr7",141466715,141468045,"+",0,"NA","promoter-TSS (NM_001111049)","promoter-TSS (NM_001111049)",18,"NM_001111049",12476,"Mm.30246","NM_009842","ENSMUSG00000025510","Cd151","PETA-3|SFA-1|Tspan24","CD151 antigen","protein-coding"]
[1892,"chr2",70661213,70662136,"+",0,"NA","non-coding (NR_027343, exon 1 of 11)","non-coding (NR_027343, exon 1 of 11)",165,"NM_027352",70231,"Mm.271950","NM_027352","ENSMUSG00000014959","Gorasp2","0610011A07Rik|2410043M02Rik|5730520M13Rik|9430094F20Rik|AW552058|GOLPH2|GRASP55|GRS2|p59","golgi reassembly stacking protein 2","protein-coding"]
[1777,"chr2",10079954,10080913,"+",0,"NA","promoter-TSS (NM_025280)","promoter-TSS (NM_025280)",77,"NM_020615",11949,"Mm.12677","NM_020615","ENSMUSG00000025781","Atp5c1","1700094F02Rik","ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1","protein-coding"]
[2044,"chr2",164832607,164833827,"+",0,"NA","promoter-TSS (NM_008906)","promoter-TSS (NM_008906)",345,"NM_001038492",19025,"Mm.359633","NM_008906","ENSMUSG00000017760","Ctsa","AU019505|PPCA|Ppgb","cathepsin A","protein-coding"]
[354,"chr10",122678421,122679395,"+",0,"NA","promoter-TSS (NR_106182)","promoter-TSS (NR_106182)",146,"NM_001110218",319468,"Mm.489703","NM_176919","ENSMUSG00000034613","Ppm1h","A430075L18Rik|ARHCL1|C030002B11Rik","protein phosphatase 1H (PP2C domain containing)","protein-coding"]
[1437,"chr17",33908875,33909756,"+",0,"NA","promoter-TSS (NM_007829)","promoter-TSS (NM_007829)",-130,"NM_007829",13163,"Mm.271809","NM_007829","ENSMUSG00000002307","Daxx","-","Fas death domain-associated protein","protein-coding"]
[2813,"chr6",100704632,100705396,"+",0,"NA","exon (NM_198612, exon 1 of 7)","exon (NM_198612, exon 1 of 7)",280,"NM_198612",232313,"Mm.272037","NM_198612",null,"Gxylt2","Glt8d4|Gm152","glucoside xylosyltransferase 2","protein-coding"]
[1064,"chr14",79480706,79482046,"+",0,"NA","promoter-TSS (NM_018765)","promoter-TSS (NM_018765)",-108,"NM_018765",22380,"Mm.476813","NM_018765","ENSMUSG00000022023","Wbp4","AW545037|BB101031|FBP21","WW domain binding protein 4","protein-coding"]
[2724,"chr6",4600473,4601241,"+",0,"NA","promoter-TSS (NM_145398)","promoter-TSS (NM_145398)",-209,"NM_145398",213819,"Mm.270703","NM_145398","ENSMUSG00000015189","Casd1","Cas1|Cast1","CAS1 domain containing 1","protein-coding"]
[2517,"chr5",35893192,35894611,"+",0,"NA","intron (NM_027373, intron 1 of 16)","intron (NM_027373, intron 1 of 16)",582,"NM_027373",70292,"Mm.125167","NM_027373","ENSMUSG00000029094","Afap1","2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018","actin filament associated protein 1","protein-coding"]
[757,"chr12",72536015,72536642,"+",0,"NA","promoter-TSS (NM_026327)","promoter-TSS (NM_026327)",-29,"NM_026327",67708,"Mm.11233","NM_026327","ENSMUSG00000034501","Pcnxl4","1810048J11Rik|4932413O10|AU017192","pecanex-like 4 (Drosophila)","protein-coding"]
[2577,"chr5",107330895,107331564,"+",0,"NA","promoter-TSS (NM_001079873)","promoter-TSS (NM_001079873)",35,"NM_054054",114642,"Mm.182836","NM_054054","ENSMUSG00000029279","Brdt","7420412D09Rik|Brd6|Fsrg3","bromodomain, testis-specific","protein-coding"]
[9,"chr1",15805459,15806203,"+",0,"NA","exon (NM_009352, exon 1 of 10)","exon (NM_009352, exon 1 of 10)",185,"NM_001286628",21749,"Mm.4306","NM_009352","ENSMUSG00000025925","Terf1","Pin2|Trbf1|Trf1","telomeric repeat binding factor 1","protein-coding"]
[3359,"chr9",45838422,45839341,"+",0,"NA","5' UTR (NM_001145947, exon 1 of 8)","5' UTR (NM_001145947, exon 1 of 8)",352,"NM_011792",23821,"Mm.24044","NM_011792","ENSMUSG00000032086","Bace1","ASP2|Bace|C76936","beta-site APP cleaving enzyme 1","protein-coding"]
[2734,"chr6",17693793,17694587,"+",0,"NA","5' UTR (NM_001289626, exon 1 of 15)","5' UTR (NM_001289626, exon 1 of 15)",196,"NM_001289625",64213,"Mm.12051","NM_022332","ENSMUSG00000029534","St7","9430001H04Rik|Fam4a2|HELG|RAY1|SEN4|TSG7","suppression of tumorigenicity 7","protein-coding"]
[1217,"chr15",99972536,99973260,"+",0,"NA","non-coding (NR_028124, exon 1 of 1)","non-coding (NR_028124, exon 1 of 1)",118,"NM_001284523",207214,"Mm.28811","NM_001024526","ENSMUSG00000023025","Larp4","DXErtd793|DXErtd793e","La ribonucleoprotein domain family, member 4","protein-coding"]
[3240,"chr8",106010511,106011748,"+",0,"NA","promoter-TSS (NM_001301176)","promoter-TSS (NM_001301176)",-349,"NM_025518",66369,"Mm.287500","NM_025518","ENSMUSG00000031901","Dus2","2310016K04Rik|Dus2l","dihydrouridine synthase 2","protein-coding"]
[1740,"chr19",45047113,45047974,"+",0,"NA","promoter-TSS (NM_001178012)","promoter-TSS (NM_001178012)",-33,"NM_053197",94280,"Mm.36169","NM_053197","ENSMUSG00000025212","Sfxn3","-","sideroflexin 3","protein-coding"]
[1600,"chr18",67774749,67775478,"+",0,"NA","TTS (NR_045376)","TTS (NR_045376)",237,"NM_001039088",72124,"Mm.307315","NM_028112","ENSMUSG00000079614","Seh1l","2610007A16Rik|AW540070|SEC13L|SEH1A|SEH1B|Seh1","SEH1-like (S. cerevisiae","protein-coding"]
[3288,"chr8",122422060,122422591,"+",0,"NA","exon (NM_145834, exon 1 of 2)","exon (NM_145834, exon 1 of 2)",240,"NM_145834",234836,"Mm.222808","NM_145834","ENSMUSG00000046108","Il17c","IL-17C","interleukin 17C","protein-coding"]
[603,"chr11",98809528,98810242,"+",0,"NA","promoter-TSS (NM_138660)","promoter-TSS (NM_138660)",77,"NM_138660",192160,"Mm.40120","NM_138660","ENSMUSG00000078676","Casc3","Btz|Mln51","cancer susceptibility candidate 3","protein-coding"]
[2750,"chr6",47942964,47943674,"+",0,"NA","non-coding (NR_027963, exon 1 of 6)","non-coding (NR_027963, exon 1 of 6)",144,"NR_027963",232785,"Mm.482185","NR_027963","ENSMUSG00000072653","Zfp783","A230106D06Rik|ENSMUSG00000072653|Gm20494","zinc finger protein 783","ncRNA"]
[2527,"chr5",45669300,45670350,"+",0,"NA","promoter-TSS (NR_073433)","promoter-TSS (NR_073433)",-100,"NM_019438",54392,"Mm.32012","NM_019438","ENSMUSG00000015880","Ncapg","5730507H05Rik|Hcapg|MFT.M05.13","non-SMC condensin I complex, subunit G","protein-coding"]
[90,"chr1",92933966,92935171,"+",0,"NA","non-coding (NR_015525, exon 2 of 2)","non-coding (NR_015525, exon 2 of 2)",160,"NM_011796",23830,"Mm.294315","NM_011796","ENSMUSG00000026270","Capn10","AW049679|Capn8|mKIAA1845","calpain 10","protein-coding"]
[3514,"chrX",9199718,9200626,"+",0,"NA","5' UTR (NM_173414, exon 1 of 5)","5' UTR (NM_173414, exon 1 of 5)",199,"NM_173414",236285,"Mm.245119","NM_173414","ENSMUSG00000047344","Lancl3","6030463G20Rik","LanC lantibiotic synthetase component C-like 3 (bacterial)","protein-coding"]
[1850,"chr2",32095460,32096417,"+",0,"NA","exon (NM_145521, exon 1 of 2)","exon (NM_145521, exon 1 of 2)",287,"NM_145521",227721,"Mm.257236","NM_145521","ENSMUSG00000051373","Plpp7","D830019K17Rik|NET39|Ppapdc3","phospholipid phosphatase 7 (inactive)","protein-coding"]
[565,"chr11",85311200,85311947,"+",0,"NA","exon (NM_016910, exon 1 of 6)","exon (NM_016910, exon 1 of 6)",319,"NM_016910",53892,"Mm.45609","NM_016910","ENSMUSG00000020525","Ppm1d","AV338790|Wip1","protein phosphatase 1D magnesium-dependent, delta isoform","protein-coding"]
[1346,"chr16",94085174,94086282,"+",0,"NA","5' UTR (NM_011377, exon 1 of 11)","5' UTR (NM_011377, exon 1 of 11)",468,"NM_011377",20465,"Mm.4775","NM_011377","ENSMUSG00000062713","Sim2","bHLHe15","single-minded homolog 2 (Drosophila)","protein-coding"]
[3102,"chr8",4166545,4167045,"+",0,"NA","intron (NM_001039578, intron 1 of 10)","CpG",228,"NM_001039578",213027,"Mm.437106","NM_153536","ENSMUSG00000011832","Evi5l","1700084G18Rik|2310039H16Rik|3110007G05Rik|B130050I23Rik","ecotropic viral integration site 5 like","protein-coding"]
[1964,"chr2",127362772,127364712,"+",0,"NA","exon (NM_009633, exon 1 of 1)","exon (NM_009633, exon 1 of 1)",456,"NM_009633",11552,"Mm.347390","NM_009633","ENSMUSG00000058620","Adra2b","Adra-2b|[a]2B|alpha2-C2|alpha2B","adrenergic receptor, alpha 2b","protein-coding"]
[3396,"chr9",60794409,60795219,"+",0,"NA","intron (NM_028283, intron 1 of 18)","CpG",266,"NM_028283",72565,"Mm.68819","NM_028283","ENSMUSG00000034485","Uaca","2700059D02Rik|nucling","uveal autoantigen with coiled-coil domains and ankyrin repeats","protein-coding"]
[3247,"chr8",106893323,106893975,"+",0,"NA","promoter-TSS (NM_145412)","promoter-TSS (NM_145412)",9,"NM_011574",21771,"Mm.10665","NM_011574","ENSMUSG00000041438","Cirh1a","Cirhin|Naic|Teg-292|Tex292","cirrhosis, autosomal recessive 1A (human)","protein-coding"]
[850,"chr12",116485499,116486451,"+",0,"NA","intron (NM_011215, intron 1 of 22)","CpG",255,"NM_011215",19276,"Mm.206054","NM_011215","ENSMUSG00000056553","Ptprn2","4930425H11Rik|IA2beta|PTP-NP|Phol|mKIAA0387|phogrin","protein tyrosine phosphatase, receptor type, N polypeptide 2","protein-coding"]
[2818,"chr6",113306489,113307429,"+",0,"NA","promoter-TSS (NM_030178)","promoter-TSS (NM_030178)",-178,"NM_030178",78783,"Mm.356059","NM_030178","ENSMUSG00000001632","Brpf1","4833438B11Rik|4930540D11Rik|Brpf2","bromodomain and PHD finger containing, 1","protein-coding"]
[2424,"chr4",148558283,148558962,"+",0,"NA","TTS (NM_020009)","TTS (NM_020009)",195,"NR_131061",50912,"Mm.266635","NM_016699","ENSMUSG00000017264","Exosc10","PM-Scl|PM/Scl-100|Pmscl2|RRP6|p2|p3|p4","exosome component 10","protein-coding"]
[3471,"chr9",108692039,108693179,"+",0,"NA","exon (NM_008924, exon 1 of 11)","exon (NM_008924, exon 1 of 11)",466,"NM_008924",19087,"Mm.253102","NM_008924","ENSMUSG00000032601","Prkar2a","1110061A24Rik|AI317181|AI836829|RII(alpha)","protein kinase, cAMP dependent regulatory, type II alpha","protein-coding"]
[891,"chr13",49652429,49653183,"+",0,"NA","promoter-TSS (NR_073168)","promoter-TSS (NR_073168)",-75,"NM_025495",66336,"Mm.440323","NM_025495","ENSMUSG00000021391","Cenpp","1700022C02Rik|4921518G09Rik","centromere protein P","protein-coding"]
[1004,"chr14",33589062,33589629,"+",0,"NA","promoter-TSS (NM_008978)","promoter-TSS (NM_008978)",75,"NM_008978",19256,"Mm.8019","NM_008978","ENSMUSG00000021940","Ptpn20","typ","protein tyrosine phosphatase, non-receptor type 20","protein-coding"]
[2106,"chr3",51276405,51277747,"+",0,"NA","non-coding (NR_073429, exon 1 of 1)","non-coding (NR_073429, exon 1 of 1)",315,"NR_073429",67746,"Mm.441177","NR_073429","ENSMUSG00000087440","4930577N17Rik","-","RIKEN cDNA 4930577N17 gene","ncRNA"]
[2696,"chr5",140606849,140608180,"+",0,"NA","exon (NM_008494, exon 1 of 8)","exon (NM_008494, exon 1 of 8)",173,"NM_008494",16848,"Mm.12834","NM_008494","ENSMUSG00000029570","Lfng","AW061165","LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase","protein-coding"]
[1360,"chr17",13760380,13760916,"+",0,"NA","5' UTR (NM_010806, exon 1 of 33)","5' UTR (NM_010806, exon 1 of 33)",107,"NM_010806",17356,"Mm.59167","NM_010806","ENSMUSG00000068036","Mllt4","5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|S-afadin","myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4","protein-coding"]
[233,"chr10",60277479,60278292,"+",0,"NA","intron (NM_001146120, intron 1 of 13)","CpG",257,"NM_001146121",19156,"Mm.277498","NM_011179","ENSMUSG00000004207","Psap","AI037048|SGP-1","prosaposin","protein-coding"]
[1013,"chr14",45657593,45658611,"+",0,"NA","promoter-TSS (NR_039593)","promoter-TSS (NR_039593)",41,"NM_001039106",114874,"Mm.121918","NM_176845","ENSMUSG00000037697","Ddhd1","Mir5131|PA-PLA1","DDHD domain containing 1","protein-coding"]
[1490,"chr17",56510323,56512504,"+",0,"NA","exon (NM_011483, exon 1 of 1)","exon (NM_011483, exon 1 of 1)",1070,"NM_011483",20834,"Mm.76862","NM_011483","ENSMUSG00000044526","Znrf4","1700094M01Rik|Ssrzf1|spzn","zinc and ring finger 4","protein-coding"]
[2198,"chr3",133309805,133310691,"+",0,"NA","exon (NM_146141, exon 1 of 12)","exon (NM_146141, exon 1 of 12)",138,"NM_146141",74776,"Mm.210305","NM_146141","ENSMUSG00000028013","Ppa2","1110013G13Rik|Sid6306","pyrophosphatase (inorganic) 2","protein-coding"]
[1693,"chr19",15984462,15985218,"+",0,"NA","promoter-TSS (NR_045355)","promoter-TSS (NR_045355)",149,"NM_198019",208518,"Mm.105652","NM_198019","ENSMUSG00000041491","Cep78","5730599I05Rik|D030027P05","centrosomal protein 78","protein-coding"]
[316,"chr10",85871745,85872277,"+",0,"NA","exon (NM_133993, exon 1 of 15)","exon (NM_133993, exon 1 of 15)",180,"NM_133993",103136,"Mm.18834","NM_133993","ENSMUSG00000001785","Pwp1","2310058A11Rik|2610205J09Rik|AI098170|AL022879|AV083409|AW550690","PWP1 homolog (S. cerevisiae)","protein-coding"]
[2947,"chr7",58658032,58659050,"+",0,"NA","exon (NM_009728, exon 1 of 21)","exon (NM_009728, exon 1 of 21)",339,"NM_009728",11982,"Mm.135129","NM_009728","ENSMUSG00000025324","Atp10a","Atp10c|pfatp","ATPase, class V, type 10A","protein-coding"]
[1806,"chr2",25706608,25707558,"+",0,"NA","exon (NM_023326, exon 1 of 1)","exon (NM_023326, exon 1 of 1)",204,"NM_023326",107771,"Mm.330057","NM_023326","ENSMUSG00000049086","Bmyc","2900002K07Rik|AW060705|Mycb","brain expressed myelocytomatosis oncogene","protein-coding"]
[2288,"chr4",74251692,74252719,"+",0,"NA","intron (NM_144787, intron 1 of 21)","CpG",326,"NM_144787",76804,"Mm.209059","NM_144787","ENSMUSG00000028397","Kdm4c","2410141F18Rik|AA517467|Gasc1|Jmjd2c","lysine (K)-specific demethylase 4C","protein-coding"]
[1738,"chr19",45005494,45006751,"+",0,"NA","promoter-TSS (NM_153796)","promoter-TSS (NM_153796)",320,"NM_053164",94067,"Mm.44174","NM_053164","ENSMUSG00000025208","Mrpl43","4930442D21Rik|bMRP36a","mitochondrial ribosomal protein L43","protein-coding"]
[2025,"chr2",158610740,158611851,"+",0,"NA","promoter-TSS (NR_040359)","promoter-TSS (NR_040359)",537,"NM_009508",22348,"Mm.143404","NM_009508","ENSMUSG00000037771","Slc32a1","R75019|VGAT|Viaat","solute carrier family 32 (GABA vesicular transporter), member 1","protein-coding"]
[1370,"chr17",24072864,24073687,"+",0,"NA","TTS (NM_001080773)","TTS (NM_001080773)",210,"NM_027008",69259,"Mm.28171","NM_027008","ENSMUSG00000016946","Kctd5","2610030N08Rik|mKIAA0176","potassium channel tetramerisation domain containing 5","protein-coding"]
[2954,"chr7",66689699,66690327,"+",0,"NA","promoter-TSS (NM_080443)","promoter-TSS (NM_080443)",124,"NR_034030",72635,"Mm.289796","NM_152815","ENSMUSG00000053091","Lins1","2700083B01Rik|AW547219|Lins|Lins2|Wins2","lines homolog (Drosophila) 1","protein-coding"]
[11,"chr1",20890346,20891134,"+",0,"NA","promoter-TSS (NR_040492)","promoter-TSS (NR_040492)",118,"NM_028829",74229,"Mm.40780","NM_028829","ENSMUSG00000025931","Paqr8","1700019B16Rik|3110001D06Rik","progestin and adipoQ receptor family member VIII","protein-coding"]
[2649,"chr5",128600366,128601999,"+",0,"NA","promoter-TSS (NM_175284)","promoter-TSS (NM_175284)",76,"NM_175284",93897,"Mm.197628","NM_175284","ENSMUSG00000081683","Fzd10","Fz-10","frizzled homolog 10 (Drosophila)","protein-coding"]
[511,"chr11",73176468,73177152,"+",0,"NA","promoter-TSS (NM_029564)","promoter-TSS (NM_029564)",198,"NM_001168470",66048,"Mm.73608","NM_025318","ENSMUSG00000047260","Emc6","0610009E20Rik|0610025L18Rik|Tmem93","ER membrane protein complex subunit 6","protein-coding"]
[842,"chr12",112907880,112908607,"+",0,"NA","TTS (NM_010588)","TTS (NM_010588)",12298,"NR_105906",102465567,null,"NR_105906","ENSMUSG00000098338","Mir6941","Gm27923|mmu-mir-6941","microRNA 6941","ncRNA"]
[2367,"chr4",130663324,130664099,"+",0,"NA","intron (NM_001159605, intron 1 of 19)","CpG",352,"NM_001159605",80912,"Mm.440206","NM_030722","ENSMUSG00000028580","Pum1","AA517475|Pumm|mKIAA0099","pumilio RNA-binding family member 1","protein-coding"]
[899,"chr13",54574910,54575556,"+",0,"NA","exon (NM_019968, exon 1 of 4)","exon (NM_019968, exon 1 of 4)",220,"NM_019968",56795,"Mm.89484","NM_019968","ENSMUSG00000025870","Arl10","Arl10a|Arm1","ADP-ribosylation factor-like 10","protein-coding"]
[3443,"chr9",102626154,102626666,"+",0,"NA","promoter-TSS (NM_001301689)","promoter-TSS (NM_001301689)",114,"NM_181394",69010,"Mm.2000","NM_181394","ENSMUSG00000035048","Anapc13","1810004D07Rik|APC13|SWM1","anaphase promoting complex subunit 13","protein-coding"]
[3259,"chr8",111056138,111057317,"+",0,"NA","exon (NM_028274, exon 1 of 1)","exon (NM_028274, exon 1 of 1)",388,"NM_028274",72544,"Mm.24174","NM_028274",null,"Exosc6","2610510N21Rik|C76919|Mtr3","exosome component 6","protein-coding"]
[2000,"chr2",152669304,152670225,"+",0,"NA","exon (NM_001159553, exon 1 of 3)","exon (NM_001159553, exon 1 of 3)",303,"NM_001159552",14950,"Mm.277327","NM_010376","ENSMUSG00000019188","H13","1200006O09Rik|4930443L17Rik|5031424B04Rik|AV020344|H-13|Hm13|PSL3|Spp","histocompatibility 13","protein-coding"]
[3340,"chr9",32695498,32696249,"+",0,"NA","promoter-TSS (NM_001038642)","promoter-TSS (NM_001038642)",-169,"NM_011808",23871,"Mm.292415","NM_011808","ENSMUSG00000032035","Ets1","AI196000|AI448617|D230050P06|Ets-1|Tpl1","E26 avian leukemia oncogene 1, 5' domain","protein-coding"]
[2437,"chr4",152116112,152117046,"+",0,"NA","exon (NM_033042, exon 1 of 7)","exon (NM_033042, exon 1 of 7)",236,"NM_033042",85030,"Mm.101198","NM_033042","ENSMUSG00000024793","Tnfrsf25","APO-3|DDR3|DR3|LARD|TR3|TRAMP|Tnfrsf12|WSL-1|WSL-LR|Wsl","tumor necrosis factor receptor superfamily, member 25","protein-coding"]
[2531,"chr5",53590391,53591183,"+",0,"NA","intron (NM_001080927, intron 1 of 10)","intron (NM_001080927, intron 1 of 10)",301,"NM_001080927",19664,"Mm.209292","NM_009035","ENSMUSG00000039191","Rbpj","AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh","recombination signal binding protein for immunoglobulin kappa J region","protein-coding"]
[3131,"chr8",25784766,25785910,"+",0,"NA","promoter-TSS (NM_026121)","promoter-TSS (NM_026121)",-129,"NM_026121",67384,"Mm.118400","NM_026121","ENSMUSG00000037316","Bag4","2410112I15Rik|SODD","BCL2-associated athanogene 4","protein-coding"]
[2689,"chr5",139271664,139272505,"+",0,"NA","3' UTR (NM_172723, exon 11 of 11)","3' UTR (NM_172723, exon 11 of 11)",18587,"NM_001163316",67604,"Mm.270137","NM_026269","ENSMUSG00000025858","Get4","1110007L15Rik|AW412535|Cee","golgi to ER traffic protein 4 homolog (S. cerevisiae)","protein-coding"]
[199,"chr10",19933563,19935055,"+",0,"NA","promoter-TSS (NM_008580)","promoter-TSS (NM_008580)",-217,"NM_008580",26408,"Mm.6595","NM_008580","ENSMUSG00000071369","Map3k5","7420452D20Rik|ASK|ASK1|MAPKKK5|Mekk5","mitogen-activated protein kinase kinase kinase 5","protein-coding"]
[2410,"chr4",139966899,139967711,"+",0,"NA","TTS (NR_035519)","TTS (NR_035519)",315,"NR_035519",100316727,null,"NR_035519","ENSMUSG00000089294","Mir2139","mmu-mir-2139","microRNA 2139","ncRNA"]
[1979,"chr2",130906228,130907065,"+",0,"NA","promoter-TSS (NR_015523)","promoter-TSS (NR_015523)",150,"NM_009730",11990,"Mm.119936","NM_009730","ENSMUSG00000027312","Atrn","AW558010|Mgca|mKIAA0548|mahogany|mg","attractin","protein-coding"]
[1899,"chr2",74668167,74669045,"+",0,"NA","exon (NM_008275, exon 1 of 2)","exon (NM_008275, exon 1 of 2)",296,"NM_008275",15433,"Mm.57227","NM_008275","ENSMUSG00000001819","Hoxd13","Hox-4.8|spdh","homeobox D13","protein-coding"]
[3066,"chr7",137437385,137438315,"+",0,"NA","intron (NR_033611, intron 1 of 10)","CpG",176,"NR_033611",620016,"Mm.388932","NR_033611","ENSMUSG00000100863","Gm12669","OTTMUSG00000007920","glutaredoxin 3 pseudogene","pseudo"]
[1929,"chr2",104122484,104123206,"+",0,"NA","promoter-TSS (NM_026634)","promoter-TSS (NM_026634)",76,"NM_026634",68243,"Mm.158191","NM_026634","ENSMUSG00000032671","A930018P22Rik","-","RIKEN cDNA A930018P22 gene","protein-coding"]
[2485,"chr5",29434618,29435395,"+",0,"NA","exon (NM_001033457, exon 1 of 11)","exon (NM_001033457, exon 1 of 11)",339,"NM_001033457",433864,"Mm.262815","NM_001033457",null,"Nom1","D5Kng1|Gm1040","nucleolar protein with MIF4G domain 1","protein-coding"]
[1737,"chr19",44756626,44757746,"+",0,"NA","promoter-TSS (NM_011037)","promoter-TSS (NM_011037)",-208,"NM_011037",18504,"Mm.192158","NM_011037","ENSMUSG00000004231","Pax2","Opdc|Pax-2","paired box 2","protein-coding"]
[1948,"chr2",119741603,119742939,"+",0,"NA","promoter-TSS (NM_146125)","promoter-TSS (NM_146125)",-66,"NM_146125",228550,"Mm.65337","NM_146125","ENSMUSG00000027296","Itpka","-","inositol 1,4,5-trisphosphate 3-kinase A","protein-coding"]
[3143,"chr8",45068826,45069475,"+",0,"NA","promoter-TSS (NM_008639)","promoter-TSS (NM_008639)",-60,"NM_008639",17773,"Mm.5133","NM_008639","ENSMUSG00000054764","Mtnr1a","MR|MelR","melatonin receptor 1A","protein-coding"]
[795,"chr12",87146931,87148066,"+",0,"NA","promoter-TSS (NM_010363)","promoter-TSS (NM_010363)",-209,"NM_001252556",14874,"Mm.29652","NM_010363","ENSMUSG00000021033","Gstz1","MAAI","glutathione transferase zeta 1 (maleylacetoacetate isomerase)","protein-coding"]
[1609,"chr18",75018551,75019287,"+",0,"NA","5' UTR (NM_027727, exon 1 of 17)","5' UTR (NM_027727, exon 1 of 17)",147,"NM_027727",69190,"Mm.173826","NM_027727","ENSMUSG00000035765","Dym","1810041M12Rik|4933427L07Rik|C030019K18Rik","dymeclin","protein-coding"]
[794,"chr12",86725864,86726523,"+",0,"NA","intron (NM_144524, intron 1 of 9)","CpG",267,"NM_144524",68737,"Mm.63979","NM_144524","ENSMUSG00000021257","Angel1","1110030H02Rik|mKIAA0759","angel homolog 1 (Drosophila)","protein-coding"]
[3411,"chr9",72532013,72532666,"+",0,"NA","promoter-TSS (NR_045735)","promoter-TSS (NR_045735)",99,"NM_001033536",319758,"Mm.32081","NM_001033536","ENSMUSG00000037674","Rfx7","2510005N23Rik|9930116O05Rik|D130086K05Rik|Rfxdc2","regulatory factor X, 7","protein-coding"]
[944,"chr13",98262650,98263541,"+",0,"NA","promoter-TSS (NM_023472)","promoter-TSS (NM_023472)",19,"NM_001271388",68558,"Mm.209642","NM_023472","ENSMUSG00000021661","Ankra2","1110004M18Rik|Ankra","ankyrin repeat, family A (RFXANK-like), 2","protein-coding"]
[3284,"chr8",121950418,121951589,"+",0,"NA","intron (NM_001285981, intron 1 of 12)","CpG",511,"NM_001285983",53325,"Mm.287163","NM_016812","ENSMUSG00000025316","Banp","AA408158|SMAR1","BTG3 associated nuclear protein","protein-coding"]
[1780,"chr2",11777053,11778952,"+",0,"NA","promoter-TSS (NM_015792)","promoter-TSS (NM_015792)",249,"NM_177268",320816,"Mm.260201","NM_177268",null,"Ankrd16","2810455F06Rik|AI646698|D430029B21Rik","ankyrin repeat domain 16","protein-coding"]
[3223,"chr8",94837697,94838947,"+",0,"NA","promoter-TSS (NM_134141)","promoter-TSS (NM_134141)",18,"NM_134141",109006,"Mm.27582","NM_134141","ENSMUSG00000031781","Ciapin1","2810413N20Rik|AA617265|AU021794|anamorsin","cytokine induced apoptosis inhibitor 1","protein-coding"]
[1113,"chr15",58888929,58889885,"+",0,"NA","TTS (NM_175151)","TTS (NM_175151)",178,"NM_175226",75841,"Mm.4537","NM_175226","ENSMUSG00000037075","Rnf139","4930555P18Rik","ring finger protein 139","protein-coding"]
[3405,"chr9",66158002,66158849,"+",0,"NA","intron (NM_010019, intron 1 of 11)","CpG",199,"NM_010019",13143,"Mm.304472","NM_010019","ENSMUSG00000032380","Dapk2","-","death-associated protein kinase 2","protein-coding"]
[3244,"chr8",106510658,106511734,"+",0,"NA","intron (NM_001037809, intron 1 of 15)","intron (NM_001037809, intron 1 of 15)",344,"NM_001037809",12560,"Mm.4658","NM_007665","ENSMUSG00000061048","Cdh3","AI385538|Cadp|Cdhp|P-cadherin|Pcad","cadherin 3","protein-coding"]
[2122,"chr3",65109253,65110059,"+",0,"NA","5' UTR (NM_010597, exon 1 of 14)","5' UTR (NM_010597, exon 1 of 14)",288,"NM_010597",16497,"Mm.316402","NM_010597","ENSMUSG00000027827","Kcnab1","Akr8a8|Kvbeta1.1|mKv(beta)1","potassium voltage-gated channel, shaker-related subfamily, beta member 1","protein-coding"]
[674,"chr11",116842576,116843655,"+",0,"NA","promoter-TSS (NM_028865)","promoter-TSS (NM_028865)",334,"NM_033398",107817,"Mm.481684","NM_033398","ENSMUSG00000056962","Jmjd6","5730436I23Rik|D11Ertd195e|PSR|PtdSerR|Ptdsr|mKIAA0585","jumonji domain containing 6","protein-coding"]
[2280,"chr4",56801861,56802882,"+",0,"NA","promoter-TSS (NM_026079)","promoter-TSS (NM_026079)",-40,"NM_026079",230233,"Mm.282743","NM_026079","ENSMUSG00000028431","Ikbkap","3110040G09Rik|6030413P05|C78473|Elp1|IKAP","inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein","protein-coding"]
[1317,"chr16",38742045,38742901,"+",0,"NA","intron (NM_001285793, intron 1 of 6)","CpG",214,"NM_001285793",56375,"Mm.182377","NM_019804","ENSMUSG00000022793","B4galt4","9130402O08Rik|B4galt-IV|b4Gal-T4|beta4Gal-T4|beta4GalT-IV","UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4","protein-coding"]
[280,"chr10",80019503,80020245,"+",0,"NA","intron (NM_027521, intron 1 of 21)","intron (NM_027521, intron 1 of 21)",199,"NM_027521",70719,"Mm.243954","NM_027521","ENSMUSG00000035697","Hmha1","6330406L22Rik|AW539505|Ha-1","histocompatibility (minor) HA-1","protein-coding"]
[957,"chr13",112927321,112928181,"+",0,"NA","promoter-TSS (NM_028151)","promoter-TSS (NM_028151)",-42,"NM_172594",218629,"Mm.35094","NM_172594","ENSMUSG00000042426","Dhx29","3732415M03|AU043276|Ddxx|E130202M19Rik","DEAH (Asp-Glu-Ala-His) box polypeptide 29","protein-coding"]
[273,"chr10",79792988,79794314,"+",0,"NA","promoter-TSS (NM_023128)","promoter-TSS (NM_023128)",79,"NM_001161747",18483,"Mm.34650","NM_023128","ENSMUSG00000035863","Palm","-","paralemmin","protein-coding"]
[2430,"chr4",151933537,151934602,"+",0,"NA","intron (NM_172704, intron 1 of 15)","CpG",349,"NM_172704",230935,"Mm.21353","NM_172704","ENSMUSG00000039768","Dnajc11","E030019A03Rik","DnaJ (Hsp40) homolog, subfamily C, member 11","protein-coding"]
[471,"chr11",62879399,62879995,"+",0,"NA","intron (NM_026210, intron 1 of 6)","intron (NM_026210, intron 1 of 6)",207,"NM_026210",67510,"Mm.9806","NM_026210","ENSMUSG00000014177","Tvp23b","1810036I24Rik|Fam18b|Fam18b1","trans-golgi network vesicle protein 23B","protein-coding"]
[2943,"chr7",51510707,51511434,"+",0,"NA","promoter-TSS (NM_001271879)","promoter-TSS (NM_001271879)",41,"NM_001271879",233246,"Mm.254431","NM_177694","ENSMUSG00000055489","Ano5","9330162L24|Gdd1|Tmem16e","anoctamin 5","protein-coding"]
[2596,"chr5",114567656,114568575,"+",0,"NA","promoter-TSS (NM_001004180)","promoter-TSS (NM_001004180)",-136,"NM_001004180",433940,"Mm.194212","NM_001004180","ENSMUSG00000041930","Fam222a","-","family with sequence similarity 222, member A","protein-coding"]
[1503,"chr17",71615996,71617014,"+",0,"NA","intron (NM_175639, intron 1 of 17)","CpG",290,"NM_175639",72515,"Mm.257762","NM_175639","ENSMUSG00000041057","Wdr43","2610318G08Rik|AU020887|AV024208|Wrd43|mKIAA0007","WD repeat domain 43","protein-coding"]
[3498,"chr9",120571317,120571893,"+",0,"NA","promoter-TSS (NM_025974)","promoter-TSS (NM_025974)",88,"NM_025974",67115,"Mm.289810","NM_025974","ENSMUSG00000025794","Rpl14","3100001N19Rik|AA407502|AL022816|CAG-ISL-7|CTG-B33|L14","ribosomal protein L14","protein-coding"]
[2262,"chr4",44012552,44013373,"+",0,"NA","exon (NM_001290470, exon 1 of 6)","exon (NM_001290470, exon 1 of 6)",312,"NM_001290470",12757,"Mm.298875","NM_016760","ENSMUSG00000028478","Clta","AV026556|Lca","clathrin, light polypeptide (Lca)","protein-coding"]
[1509,"chr17",75005507,75006545,"+",0,"NA","exon (NM_019919, exon 1 of 34)","exon (NM_019919, exon 1 of 34)",497,"NM_019919",268977,"Mm.269747","NM_019919","ENSMUSG00000001870","Ltbp1","9430031G15Rik|9830146M04|Ltbp-1|Tgfb|b2b1000Clo","latent transforming growth factor beta binding protein 1","protein-coding"]
[1936,"chr2",112454848,112455421,"+",0,"NA","exon (NM_133749, exon 1 of 5)","exon (NM_133749, exon 1 of 5)",109,"NM_133749",73024,"Mm.268027","NM_133749",null,"Emc7","2900064A13Rik|AI451465|ORF3|c11orf3","ER membrane protein complex subunit 7","protein-coding"]
[2912,"chr7",30493581,30494589,"+",0,"NA","exon (NM_019546, exon 2 of 10)","exon (NM_019546, exon 2 of 10)",427,"NM_019546",56189,"Mm.270525","NM_019546","ENSMUSG00000036892","Prodh2","2510028N04Rik|2510038B11Rik|MmPOX|MmPOX1|POX1","proline dehydrogenase (oxidase) 2","protein-coding"]
[1325,"chr16",58408081,58409189,"+",0,"NA","promoter-TSS (NM_028523)","promoter-TSS (NM_028523)",100,"NM_028523",73379,"Mm.373589","NM_028523","ENSMUSG00000035107","Dcbld2","1700055P21Rik|AW146002|CLCP1|Esdn","discoidin, CUB and LCCL domain containing 2","protein-coding"]
[2512,"chr5",34573692,34574303,"+",0,"NA","promoter-TSS (NR_106111)","promoter-TSS (NR_106111)",-154,"NR_106111",102466999,null,"NR_106111","ENSMUSG00000099082","Mir7036b","Gm27625|mmu-mir-7036b","microRNA 7036b","ncRNA"]
[1643,"chr19",5474436,5475613,"+",0,"NA","exon (NM_001164352, exon 1 of 10)","exon (NM_001164352, exon 1 of 10)",289,"NM_001164352",58859,"Mm.276367","NM_021474","ENSMUSG00000024909","Efemp2","0610011K11Rik|Fbln4|MBP1","epidermal growth factor-containing fibulin-like extracellular matrix protein 2","protein-coding"]
[131,"chr1",151344092,151345523,"+",0,"NA","intron (NM_054102, intron 1 of 14)","CpG",309,"NM_001039511",117198,"Mm.33764","NM_028582","ENSMUSG00000023150","Ivns1abp","1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850","influenza virus NS1A binding protein","protein-coding"]
[1565,"chr18",37089740,37090852,"+",0,"NA","exon (NM_001003671, exon 1 of 4)","exon (NM_001003671, exon 1 of 4)",160,"NM_001003671",353236,"Mm.308500","NM_001003671","ENSMUSG00000007440","Pcdhac1","CNRc1","protocadherin alpha subfamily C, 1","protein-coding"]
[502,"chr11",72207126,72207725,"+",0,"NA","promoter-TSS (NM_026559)","promoter-TSS (NM_026559)",-129,"NM_026559",52700,"Mm.27670","NM_026559",null,"Txndc17","4831443O22Rik|D11Ertd672e|TRP14|Txnl5","thioredoxin domain containing 17","protein-coding"]
[1286,"chr16",20611275,20611902,"+",0,"NA","promoter-TSS (NM_177941)","promoter-TSS (NM_177941)",-13,"NM_177940",107522,"Mm.263319","NM_025462","ENSMUSG00000022842","Ece2","1810009K13Rik|6330509A19Rik|9630025D12Rik|BB127715|Ece-2","endothelin converting enzyme 2","protein-coding"]
[314,"chr10",84917236,84918095,"+",0,"NA","promoter-TSS (NM_001013441)","promoter-TSS (NM_001013441)",52,"NM_183172",237422,"Mm.18936","NM_183172",null,"Ric8b","BC051080|Ric-8|Ric-8b","resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)","protein-coding"]
[1796,"chr2",25262254,25264194,"+",0,"NA","exon (NM_175286, exon 1 of 4)","exon (NM_175286, exon 1 of 4)",626,"NM_175286",97031,"Mm.308539","NM_175286","ENSMUSG00000048707","Tprn","C430004E15Rik|C87750","taperin","protein-coding"]
[3385,"chr9",57589304,57589942,"+",0,"NA","TTS (NM_022813)","TTS (NM_022813)",171,"NM_027895",71742,"Mm.155877","NM_027895","ENSMUSG00000032308","Ulk3","1200015E14Rik","unc-51-like kinase 3","protein-coding"]
[2998,"chr7",100607183,100608219,"+",0,"NA","5' UTR (NM_001163663, exon 1 of 8)","5' UTR (NM_001163663, exon 1 of 8)",115,"NM_001163663",19346,"Mm.28650","NM_024287","ENSMUSG00000030704","Rab6a","2610028L11Rik|AA419671|Rab6","RAB6A, member RAS oncogene family","protein-coding"]
[1502,"chr17",71551685,71552521,"+",0,"NA","promoter-TSS (NM_001142631)","promoter-TSS (NM_001142631)",42,"NM_029254",70891,"Mm.477599","NM_029254","ENSMUSG00000052525","Spdya","4921517J08Rik|4930548B21Rik|GS4|MLZ-465|Spdy1","speedy/RINGO cell cycle regulator family, member A","protein-coding"]
[2638,"chr5",123973596,123974372,"+",0,"NA","intron (NM_145070, intron 1 of 31)","CpG",356,"NM_145070",29816,"Mm.149954","NM_145070",null,"Hip1r","AA410023|mKIAA0655","huntingtin interacting protein 1 related","protein-coding"]
[1872,"chr2",37442637,37443594,"+",0,"NA","promoter-TSS (NM_199025)","promoter-TSS (NM_199025)",6,"NM_199025",320633,"Mm.383299","NM_199025","ENSMUSG00000050714","Zbtb26","A630026F21Rik","zinc finger and BTB domain containing 26","protein-coding"]
[355,"chr10",122985240,122985902,"+",0,"NA","TTS (NR_029527)","TTS (NR_029527)",153,"NR_029527",387251,null,"NR_029527","ENSMUSG00000065406","Mirlet7i","Mirnlet7i|let-7i|mmu-let-7i","microRNA let7i","ncRNA"]
[553,"chr11",82388524,82389235,"+",0,"NA","promoter-TSS (NM_001304439)","promoter-TSS (NM_001304439)",-21,"NM_001304439",270893,"Mm.341593","NM_023438","ENSMUSG00000020701","Tmem132e","Gm644","transmembrane protein 132E","protein-coding"]
[2058,"chr2",168080604,168081719,"+",0,"NA","5' UTR (NM_021409, exon 1 of 3)","5' UTR (NM_021409, exon 1 of 3)",157,"NM_021409",58220,"Mm.292834","NM_021409","ENSMUSG00000044641","Pard6b","AV025615|Par6b","par-6 family cell polarity regulator beta","protein-coding"]
[1252,"chr16",13671797,13672525,"+",0,"NA","intron (NM_025976, intron 1 of 7)","CpG",141,"NM_025653",66598,"Mm.223689","NM_025653","ENSMUSG00000079737","3110001I22Rik","-","RIKEN cDNA 3110001I22 gene","protein-coding"]
[3488,"chr9",118506032,118506584,"+",0,"NA","promoter-TSS (NM_018748)","promoter-TSS (NM_018748)",-10,"NM_018748",54214,"Mm.10409","NM_018748","ENSMUSG00000038708","Golga4","AI225887|AU019508|Olp-1","golgi autoantigen, golgin subfamily a, 4","protein-coding"]
[2877,"chr7",16098608,16099169,"+",0,"NA","intron (NM_025898, intron 1 of 10)","CpG",245,"NM_025898",108124,"Mm.104540","NM_025898","ENSMUSG00000006024","Napa","1500039N14Rik|AW209189|RA81|SNAPA|SNARE|a-SNAP|hyh","N-ethylmaleimide sensitive fusion protein attachment protein alpha","protein-coding"]
[2643,"chr5",124552565,124553270,"+",0,"NA","promoter-TSS (NM_026409)","promoter-TSS (NM_026409)",53,"NM_026409",67848,"Mm.281601","NM_026409","ENSMUSG00000029389","Ddx55","2810021H22Rik|mKIAA1595","DEAD (Asp-Glu-Ala-Asp) box polypeptide 55","protein-coding"]
[555,"chr11",83302528,83303332,"+",0,"NA","intron (NM_027915, intron 1 of 20)","CpG",233,"NM_001035854",71770,"Mm.39053","NM_027915","ENSMUSG00000035152","Ap2b1","1300012O03Rik|AI788979","adaptor-related protein complex 2, beta 1 subunit","protein-coding"]
[1037,"chr14",61138379,61138822,"+",0,"NA","5' UTR (NM_172809, exon 1 of 10)","5' UTR (NM_172809, exon 1 of 10)",143,"NM_172809",50720,"Mm.440703","NM_015788","ENSMUSG00000048279","Sacs","A230052M14|DNAJC29|E130115J16Rik|mKIAA0730","sacsin","protein-coding"]
[2935,"chr7",45872654,45874076,"+",0,"NA","intron (NM_133950, intron 1 of 4)","intron (NM_133950, intron 1 of 4)",525,"NM_133950",68137,"Mm.298433","NM_133950","ENSMUSG00000002778","Kdelr1","8030486F04Rik|AW215843|Erd2.1","KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1","protein-coding"]
[2513,"chr5",34660005,34661018,"+",0,"NA","promoter-TSS (NM_029278)","promoter-TSS (NM_029278)",132,"NM_019497",14772,"Mm.117076","NM_019497","ENSMUSG00000052783","Grk4","A830025H08Rik|GRK|Gprk2l|Gprk4","G protein-coupled receptor kinase 4","protein-coding"]
[37,"chr1",57774632,57775755,"+",0,"NA","intron (NM_144882, intron 1 of 13)","CpG",332,"NM_144882",67198,"Mm.159989","NM_144882","ENSMUSG00000038305","Spats2l","2810022L02Rik|A230104H11Rik|AA987173|AI480531|AI842453|AW413586","spermatogenesis associated, serine-rich 2-like","protein-coding"]
[3328,"chr9",21264422,21265780,"+",0,"NA","promoter-TSS (NM_153583)","promoter-TSS (NM_153583)",-184,"NM_153583",235040,"Mm.440165","NM_153583","ENSMUSG00000002820","Atg4d","9830134P12Rik|APG4-D|Apg4d|Atg4dl|Autl4","autophagy related 4D, cysteine peptidase","protein-coding"]
[855,"chr13",14063752,14064564,"+",0,"NA","promoter-TSS (NM_010282)","promoter-TSS (NM_010282)",374,"NM_198122",94246,"Mm.439784","NM_194262","ENSMUSG00000039219","Arid4b","BCAA|BRCAA1|RBBP1L1|Rbp1l1|SAP180","AT rich interactive domain 4B (RBP1-like)","protein-coding"]
[195,"chr10",13965993,13966720,"+",0,"NA","promoter-TSS (NM_010437)","promoter-TSS (NM_010437)",-23,"NM_010437",15273,"Mm.42157","NM_010437","ENSMUSG00000015501","Hivep2","MIBP1|Schnurri-2|Shn-2","human immunodeficiency virus type I enhancer binding protein 2","protein-coding"]
[2005,"chr2",155276134,155277084,"+",0,"NA","non-coding (NR_046364, exon 1 of 3)","non-coding (NR_046364, exon 1 of 3)",245,"NR_046364",66734,"Mm.196239","NM_025735","ENSMUSG00000027602","Map1lc3a","1010001H21Rik|4922501H04Rik|LC3|LC3a","microtubule-associated protein 1 light chain 3 alpha","protein-coding"]
[1706,"chr19",23687081,23687997,"+",0,"NA","exon (NM_028208, exon 1 of 7)","exon (NM_028208, exon 1 of 7)",139,"NM_028208",72351,"Mm.474795","NM_028208","ENSMUSG00000074925","Ptar1","1700084D09Rik|2010013L17Rik|4930428J16Rik|AI449677","protein prenyltransferase alpha subunit repeat containing 1","protein-coding"]
[2828,"chr6",115134895,115135683,"+",0,"NA","promoter-TSS (NR_132436)","promoter-TSS (NR_132436)",387,"NM_001111015",20965,"Mm.441431","NM_013681","ENSMUSG00000009394","Syn2","2900074L19Rik|AI836018|AI841723","synapsin II","protein-coding"]
[1839,"chr2",30657896,30659041,"+",0,"NA","Intergenic","CpG",-62742,"NR_037272",100526499,null,"NR_037272","ENSMUSG00000093091","Mir3089","mir-3089|mmu-mir-3089","microRNA 3089","ncRNA"]
[1788,"chr2",19445195,19446640,"+",0,"NA","exon (NM_018809, exon 1 of 2)","exon (NM_018809, exon 1 of 2)",254,"NM_018809",19213,"Mm.69647","NM_018809","ENSMUSG00000026735","Ptf1a","PTF1-p48|PTF1p48|bHLHa29","pancreas specific transcription factor, 1a","protein-coding"]
[2186,"chr3",118561993,118562735,"+",0,"NA","intron (NM_170778, intron 1 of 22)","intron (NM_170778, intron 1 of 22)",186,"NM_170778",99586,"Mm.27907","NM_170778","ENSMUSG00000033308","Dpyd","AI315208|DPD|E330028L06Rik","dihydropyrimidine dehydrogenase","protein-coding"]
[679,"chr11",117331697,117332699,"+",0,"NA","promoter-TSS (NM_001113488)","promoter-TSS (NM_001113488)",-115,"NM_001113488",53860,"Mm.38450","NM_017380","ENSMUSG00000059248","2009-09-01","MSF1|Msf|PNUTL4|Sint1","septin 9","protein-coding"]
[680,"chr11",117653855,117656057,"+",0,"NA","intron (NM_198022, intron 1 of 21)","CpG",667,"NM_198022",217351,"Mm.40272","NM_198022","ENSMUSG00000025571","Tnrc6c","9930033H14Rik|mKIAA1582","trinucleotide repeat containing 6C","protein-coding"]
[831,"chr12",111574030,111575225,"+",0,"NA","promoter-TSS (NR_045295)","promoter-TSS (NR_045295)",117,"NM_022801",17169,"Mm.260504","NM_021516","ENSMUSG00000007411","Mark3","1600015G02Rik|A430080F22Rik|C-TAK1|ETK-1|ETK1|Emk2|MPK10","MAP/microtubule affinity regulating kinase 3","protein-coding"]
[1147,"chr15",76709754,76711332,"+",0,"NA","promoter-TSS (NM_058214)","promoter-TSS (NM_058214)",16,"NM_058214",79456,"Mm.18373","NM_058214","ENSMUSG00000033762","Recql4","RecQ4","RecQ protein-like 4","protein-coding"]
[1960,"chr2",126552829,126553761,"+",0,"NA","exon (NM_011978, exon 1 of 10)","exon (NM_011978, exon 1 of 10)",271,"NM_011978",26458,"Mm.290044","NM_011978",null,"Slc27a2","ACSVL1|FATP2|VLCS|Vlac|Vlacs","solute carrier family 27 (fatty acid transporter), member 2","protein-coding"]
[2355,"chr4",128654438,128655396,"+",0,"NA","intron (NM_001195130, intron 1 of 14)","CpG",215,"NM_001195130",54383,"Mm.473738","NM_018774","ENSMUSG00000028796","Phc2","A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36","polyhomeotic-like 2 (Drosophila)","protein-coding"]
[1241,"chr16",5049849,5050822,"+",0,"NA","promoter-TSS (NM_028720)","promoter-TSS (NM_028720)",267,"NM_026666",170644,"Mm.66356","NM_026666","ENSMUSG00000039473","Ubn1","1110029L11Rik|2610108L02Rik|AA673476|AW124741","ubinuclein 1","protein-coding"]
[2783,"chr6",83156178,83156820,"+",0,"NA","promoter-TSS (NM_027948)","promoter-TSS (NM_027948)",95,"NM_027948",71837,"Mm.17621","NM_027948","ENSMUSG00000030030","1700003E16Rik","AU041756","RIKEN cDNA 1700003E16 gene","protein-coding"]
[1441,"chr17",34039029,34039807,"+",0,"NA","promoter-TSS (NM_009926)","promoter-TSS (NM_009926)",-19,"NM_009926",12815,"Mm.20230","NM_009926","ENSMUSG00000024330","Col11a2","-","collagen, type XI, alpha 2","protein-coding"]
[647,"chr11",107027615,107028686,"+",0,"NA","promoter-TSS (NM_001163473)","promoter-TSS (NM_001163473)",-73,"NM_001163473",69066,"Mm.40679","NM_001163473",null,"1810010H24Rik","OTTMUSG00000003581","RIKEN cDNA 1810010H24 gene","protein-coding"]
[1206,"chr15",97784335,97785070,"+",0,"NA","intron (NM_026353, intron 1 of 2)","CpG",337,"NM_026353",67739,"Mm.28955","NM_026353","ENSMUSG00000081534","Slc48a1","4930570C03Rik","solute carrier family 48 (heme transporter), member 1","protein-coding"]
[334,"chr10",96616365,96617393,"+",0,"NA","promoter-TSS (NM_007569)","promoter-TSS (NM_007569)",-122,"NM_007569",12226,"Mm.23811","NM_007569","ENSMUSG00000036478","Btg1","AI426953|AW546738","B cell translocation gene 1, anti-proliferative","protein-coding"]
[2292,"chr4",86575449,86576179,"+",0,"NA","5' UTR (NM_178376, exon 1 of 1)","5' UTR (NM_178376, exon 1 of 1)",141,"NM_178376",68441,"Mm.31178","NM_178376","ENSMUSG00000070934","Rraga","1300010C19Rik|AI255374|FIP-1|RAGA","Ras-related GTP binding A","protein-coding"]
[1997,"chr2",152105351,152106151,"+",0,"NA","exon (NM_029688, exon 1 of 2)","exon (NM_029688, exon 1 of 2)",227,"NM_029688",76650,"Mm.218639","NM_029688","ENSMUSG00000032802","Srxn1","1700127B04Rik|AI854065|AW488194|Npn3|Srx|Srx1|TX01","sulfiredoxin 1 homolog (S. cerevisiae)","protein-coding"]
[1027,"chr14",55490645,55491882,"+",0,"NA","TTS (NM_001037938)","TTS (NM_001037938)",170,"NM_001024645",268747,"Mm.151577","NM_001024645","ENSMUSG00000022211","Lrrc16b","mFLJ00240","leucine rich repeat containing 16B","protein-coding"]
[1680,"chr19",8837305,8837953,"+",0,"NA","5' UTR (NM_001136064, exon 1 of 12)","5' UTR (NM_001136064, exon 1 of 12)",162,"NM_001136064",14705,"Mm.345134","NM_008144","ENSMUSG00000071657","Bscl2","2900097C17Rik|AI046355|Gng3lg","Berardinelli-Seip congenital lipodystrophy 2 homolog (seipin)","protein-coding"]
[423,"chr11",50377533,50378696,"+",0,"NA","intron (NM_021510, intron 1 of 13)","CpG",395,"NM_021510",59013,"Mm.21740","NM_021510","ENSMUSG00000007850","Hnrnph1","AI642080|E430005G16Rik|Hnrnph|Hnrph1","heterogeneous nuclear ribonucleoprotein H1","protein-coding"]
[2879,"chr7",16452776,16453491,"+",0,"NA","exon (NM_026938, exon 1 of 3)","exon (NM_026938, exon 1 of 3)",354,"NM_026938",69094,"Mm.29633","NM_026938","ENSMUSG00000019158","Tmem160","1810008O21Rik","transmembrane protein 160","protein-coding"]
[1953,"chr2",121289082,121290218,"+",0,"NA","promoter-TSS (NM_032393)","promoter-TSS (NM_032393)",48,"NM_032393",17754,"Mm.36501","NM_032393","ENSMUSG00000027254","Map1a","6330416M19Rik|AI853608|Mtap-1|Mtap1|Mtap1a|moth1","microtubule-associated protein 1 A","protein-coding"]
[1139,"chr15",76389719,76390369,"+",0,"NA","promoter-TSS (NM_001162489)","promoter-TSS (NM_001162489)",13,"NM_001162489",223658,"Mm.123240","NM_175457","ENSMUSG00000022558","Mroh1","D330001F17Rik|Heatr7a","maestro heat-like repeat family member 1","protein-coding"]
[2757,"chr6",52158331,52159027,"+",0,"NA","promoter-TSS (NM_010449)","promoter-TSS (NM_010449)",155,"NR_131181",105242658,"Mm.372521","NR_131181",null,"Hotairm1","Gm15051|Hoxaas1|OTTMUSG00000018870","Hoxa transcript antisense RNA, myeloid-specific 1","ncRNA"]
[1319,"chr16",43889638,43890268,"+",0,"NA","promoter-TSS (NM_027801)","promoter-TSS (NM_027801)",51,"NM_027801",212153,"Mm.209835","NM_027801","ENSMUSG00000022701","Ccdc191","2610015P09Rik|8430422M09Rik|AU040712","coiled-coil domain containing 191","protein-coding"]
[1826,"chr2",29124939,29125747,"+",0,"NA","5' UTR (NM_198033, exon 1 of 26)","5' UTR (NM_198033, exon 1 of 26)",351,"NM_198033",269254,"Mm.41867","NM_198033","ENSMUSG00000043535","Setx","A130090N03|A930037J23Rik|AOA2|AW060766|Als4|SCAR1|Sen1|mKIAA0625","senataxin","protein-coding"]
[2454,"chr4",155803377,155804044,"+",0,"NA","promoter-TSS (NM_025570)","promoter-TSS (NM_025570)",92,"NM_025570",66448,"Mm.23825","NM_025570","ENSMUSG00000029066","Mrpl20","2610008D01Rik|4930425I20Rik","mitochondrial ribosomal protein L20","protein-coding"]
[2077,"chr2",180893940,180894846,"+",0,"NA","TTS (NR_029538)","TTS (NR_029538)",353,"NR_029538",723951,null,"NR_029538","ENSMUSG00000065454","Mir124a-3","Mirn124a-3|mir-124-3|mir-124a-3","microRNA 124a-3","ncRNA"]
[1222,"chr15",101128501,101129302,"+",0,"NA","intron (NM_001277259, intron 1 of 11)","intron (NM_001277259, intron 1 of 11)",379,"NM_001277257",11482,"Mm.279542","NM_009612","ENSMUSG00000000530","Acvrl1","AI115505|AI427544|Acvrlk1|Alk1","activin A receptor, type II-like 1","protein-coding"]
[3473,"chr9",108808074,108808787,"+",0,"NA","promoter-TSS (NM_030729)","promoter-TSS (NM_030729)",50,"NM_030729",80987,"Mm.192416","NM_030729","ENSMUSG00000032598","Nckipsd","AF3P21|DIP1|ORF1|SPIN90|WASLBP|WISH|Wasbp","NCK interacting protein with SH3 domain","protein-coding"]
[2036,"chr2",164073877,164074512,"+",0,"NA","promoter-TSS (NM_021420)","promoter-TSS (NM_021420)",16,"NM_021420",58231,"Mm.234472","NM_021420","ENSMUSG00000018209","Stk4","AI447339|AU020804|Kas-2|Mst1|Ysk3","serine/threonine kinase 4","protein-coding"]
[1747,"chr19",46328020,46329693,"+",0,"NA","TTS (NM_001164292)","TTS (NM_001164292)",672,"NM_133694",68431,"Mm.19973","NM_133694","ENSMUSG00000025226","Fbxl15","0710008C12Rik|Fbxo37","F-box and leucine-rich repeat protein 15","protein-coding"]
[174,"chr1",191325656,191326621,"+",0,"NA","intron (NM_025864, intron 1 of 7)","CpG",173,"NM_025864",66950,"Mm.236300","NM_025864",null,"Tmem206","2310028N02Rik|AI118576","transmembrane protein 206","protein-coding"]
[820,"chr12",108836764,108837472,"+",0,"NA","TTS (NR_029773)","TTS (NR_029773)",145,"NR_029773",723946,null,"NR_029773","ENSMUSG00000065429","Mir345","Mirn345|mir-345|mmu-mir-345","microRNA 345","ncRNA"]
[1799,"chr2",25371649,25373307,"+",0,"NA","exon (NM_001081085, exon 1 of 7)","exon (NM_001081085, exon 1 of 7)",443,"NM_001081085",72080,"Mm.250293","NM_001081085","ENSMUSG00000026955","Sapcd2","2010317E24Rik|6030458L21Rik|AL033337|ang","suppressor APC domain containing 2","protein-coding"]
[1571,"chr18",38992775,38994208,"+",0,"NA","exon (NM_175164, exon 1 of 23)","exon (NM_175164, exon 1 of 23)",346,"NM_175164",71302,"Mm.329396","NM_175164","ENSMUSG00000036452","Arhgap26","1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621","Rho GTPase activating protein 26","protein-coding"]
[422,"chr11",50224657,50225497,"+",0,"NA","promoter-TSS (NM_145926)","promoter-TSS (NM_145926)",-258,"NM_145926",103534,"Mm.86759","NM_145926","ENSMUSG00000036620","Mgat4b","AA407995|GnTIVb","mannoside acetylglucosaminyltransferase 4, isoenzyme B","protein-coding"]
[905,"chr13",55506829,55507729,"+",0,"NA","TTS (NR_105910)","TTS (NR_105910)",413,"NR_105910",102465570,null,"NR_105910","ENSMUSG00000099096","Mir6945","Gm27779|mmu-mir-6945","microRNA 6945","ncRNA"]
[3308,"chr8",125012563,125013543,"+",0,"NA","promoter-TSS (NM_016909)","promoter-TSS (NM_016909)",56,"NM_016909",53424,"Mm.5248","NM_016909","ENSMUSG00000056820","Tsnax","R74833|Trax","translin-associated factor X","protein-coding"]
[1552,"chr18",33463753,33464420,"+",0,"NA","promoter-TSS (NM_001109989)","promoter-TSS (NM_001109989)",-57,"NM_001109988",27528,"Mm.407415","NM_053078","ENSMUSG00000042834","Nrep","AI325076|D0H4S114|Harp|P311|PTZ17|SEZ17","neuronal regeneration related protein","protein-coding"]
[1194,"chr15",88818949,88819837,"+",0,"NA","promoter-TSS (NM_001142357)","promoter-TSS (NM_001142357)",-75,"NM_145477",223774,"Mm.41512","NM_145477","ENSMUSG00000035845","Alg12","ECM39","asparagine-linked glycosylation 12 (alpha-1,6-mannosyltransferase)","protein-coding"]
[41,"chr1",58973000,58974212,"+",0,"NA","promoter-TSS (NM_172656)","promoter-TSS (NM_172656)",35,"NM_172656",227154,"Mm.286006","NM_172656","ENSMUSG00000026027","Stradb","AA792893|Als2cr2|B830008M19|D1Ucla2|ILPIP|ILPIPA|PRO1038|Papk|Syradb","STE20-related kinase adaptor beta","protein-coding"]
[3014,"chr7",111028627,111029491,"+",0,"NA","5' UTR (NM_009431, exon 1 of 25)","5' UTR (NM_009431, exon 1 of 25)",108,"NM_009431",22083,"Mm.255858","NM_009431","ENSMUSG00000005609","Ctr9","AA409336|Sh2bp1|Tsbp|Tsp|mKIAA0155","Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)","protein-coding"]
[52,"chr1",66174915,66175565,"+",0,"NA","promoter-TSS (NM_001039934)","promoter-TSS (NM_001039934)",-89,"NM_008632",17756,"Mm.256966","NM_008632","ENSMUSG00000015222","Map2","G1-397-34|MAP-2|Mtap-2|Mtap2|repro4","microtubule-associated protein 2","protein-coding"]
[3084,"chr7",141326850,141328434,"+",0,"NA","promoter-TSS (NM_027797)","promoter-TSS (NM_027797)",83,"NM_016874",54006,"Mm.28392","NM_016874","ENSMUSG00000058886","Deaf1","AU042387|C230009B13Rik|NUDR","deformed epidermal autoregulatory factor 1 (Drosophila)","protein-coding"]
[2887,"chr7",24610298,24611672,"+",0,"NA","promoter-TSS (NM_001102613)","promoter-TSS (NM_001102613)",-343,"NM_001102613",232970,"Mm.333663","NM_001102613","ENSMUSG00000074277","Phldb3","EG232970|ENSMUSG00000061511|Gm10102","pleckstrin homology-like domain, family B, member 3","protein-coding"]
[1451,"chr17",35089079,35089698,"+",0,"NA","promoter-TSS (NM_178592)","promoter-TSS (NM_178592)",97,"NM_178592",193742,"Mm.43745","NM_178592","ENSMUSG00000007036","Abhd16a","AI326074|Bat-5|Bat5|D17H6S82E|NG26","abhydrolase domain containing 16A","protein-coding"]
[302,"chr10",81153269,81154617,"+",0,"NA","TTS (NM_021501)","TTS (NM_021501)",13777,"NM_021501",59004,"Mm.34428","NM_021501",null,"Pias4","PIASY|Pias-gamma|Piasg","protein inhibitor of activated STAT 4","protein-coding"]
[1453,"chr17",35135105,35135948,"+",0,"NA","promoter-TSS (NM_001252469)","promoter-TSS (NM_001252469)",-188,"NM_001252469",224727,"Mm.203962","NM_057171","ENSMUSG00000024392","Bag6","2410045D21Rik|AA408914|BAG-6|Bat3|D17H6S52E|G3|Scythe","BCL2-associated athanogene 6","protein-coding"]
[866,"chr13",31557922,31558552,"+",0,"NA","promoter-TSS (NM_008239)","promoter-TSS (NM_008239)",67,"NM_008239",15220,"Mm.44235","NM_008239","ENSMUSG00000038415","Foxq1","HFH-1|Hfh1|Hfh1l|sa","forkhead box Q1","protein-coding"]
[2452,"chr4",155601411,155602220,"+",0,"NA","intron (NM_177186, intron 1 of 8)","CpG",399,"NM_177186",320541,"Mm.306018","NM_177186","ENSMUSG00000042202","Slc35e2","A530082C11Rik|AI957035","solute carrier family 35, member E2","protein-coding"]
[2223,"chr3",157566672,157567477,"+",0,"NA","exon (NM_011196, exon 1 of 3)","exon (NM_011196, exon 1 of 3)",182,"NM_011196",19218,"Mm.30424","NM_011196","ENSMUSG00000040016","Ptger3","EP3|Pgerep3|Ptgerep3","prostaglandin E receptor 3 (subtype EP3)","protein-coding"]
[3358,"chr9",45430227,45431610,"+",0,"NA","intron (NM_001081270, intron 1 of 32)","CpG",314,"NR_040732",74602,"Mm.394117","NR_040732","ENSMUSG00000097074","4833428L15Rik","-","RIKEN cDNA 4833428L15 gene","ncRNA"]
[593,"chr11",96928615,96929592,"+",0,"NA","promoter-TSS (NM_146026)","promoter-TSS (NM_146026)",-221,"NM_146026",217138,"Mm.342551","NM_146026",null,"Prr15l","Atad4|BC022765|E230006A12Rik","proline rich 15-like","protein-coding"]
[770,"chr12",79028956,79029723,"+",0,"NA","5' UTR (NM_181073, exon 1 of 29)","5' UTR (NM_181073, exon 1 of 29)",176,"NM_181073",211945,"Mm.478321","NM_181073","ENSMUSG00000060716","Plekhh1","AV308913|C77772|D630024D12Rik|mKIAA1200","pleckstrin homology domain containing, family H (with MyTH4 domain) member 1","protein-coding"]
[3380,"chr9",56994680,56995854,"+",0,"NA","5' UTR (NM_019651, exon 1 of 13)","5' UTR (NM_019651, exon 1 of 13)",299,"NM_019651",56294,"Mm.325643","NM_019651","ENSMUSG00000032290","Ptpn9","MEG2","protein tyrosine phosphatase, non-receptor type 9","protein-coding"]
[188,"chr10",7792542,7793137,"+",0,"NA","promoter-TSS (NM_026141)","promoter-TSS (NM_026141)",-55,"NM_026141",67418,"Mm.38927","NM_026141","ENSMUSG00000015757","Ppil4","3732410E19Rik|3830425H19Rik|AI788954|AW146233|PPIase","peptidylprolyl isomerase (cyclophilin)-like 4","protein-coding"]
[402,"chr11",29526069,29526734,"+",0,"NA","promoter-TSS (NM_001282120)","promoter-TSS (NM_001282120)",4,"NM_133767",76784,"Mm.285429","NM_133767","ENSMUSG00000020459","Mtif2","2310038D14Rik|2410112O06Rik|IF-2(Mt)|IF-2mt|IF2(mt)","mitochondrial translational initiation factor 2","protein-coding"]
[3152,"chr8",61223605,61224677,"+",0,"NA","promoter-TSS (NM_021506)","promoter-TSS (NM_021506)",-30,"NM_021506",59009,"Mm.27949","NM_021506","ENSMUSG00000031642","Sh3rf1","2200003J05Rik|Posh|R75531|Sh3md2","SH3 domain containing ring finger 1","protein-coding"]
[1940,"chr2",118813927,118814530,"+",0,"NA","exon (NM_026412, exon 1 of 9)","exon (NM_026412, exon 1 of 9)",225,"NM_026412",51944,"Mm.252695","NM_026412",null,"Knstrn","1700025D04Rik|C15orf23|D2Ertd750e|SKAP|Traf4af1","kinetochore-localized astrin/SPAG5 binding","protein-coding"]
[1097,"chr15",34306452,34307100,"+",0,"NA","promoter-TSS (NM_016762)","promoter-TSS (NM_016762)",95,"NM_016762",17181,"Mm.396856","NM_016762","ENSMUSG00000022324","Matn2","Crtm2|matrilin-2","matrilin 2","protein-coding"]
[641,"chr11",105589316,105590534,"+",0,"NA","promoter-TSS (NM_181071)","promoter-TSS (NM_181071)",-61,"NM_181071",77097,"Mm.22501","NM_175492","ENSMUSG00000053580","Tanc2","3526402J09Rik|5730590C14Rik","tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2","protein-coding"]
[3366,"chr9",49055371,49056064,"+",0,"NA","exon (NM_012039, exon 1 of 16)","exon (NM_012039, exon 1 of 16)",136,"NM_012039",26951,"Mm.24791","NM_012039","ENSMUSG00000032264","Zw10","6330566F14Rik|MmZw10","zw10 kinetochore protein","protein-coding"]
[1641,"chr19",5068037,5069852,"+",0,"NA","exon (NM_054042, exon 1 of 1)","exon (NM_054042, exon 1 of 1)",866,"NM_054042",70445,"Mm.29597","NM_054042","ENSMUSG00000056481","Cd248","2610111G01Rik|AI842296|Cd164l1|Tem1","CD248 antigen, endosialin","protein-coding"]
[838,"chr12",112658756,112659650,"+",0,"NA","TTS (NR_105904)","TTS (NR_105904)",148,"NR_105904",102465566,null,"NR_105904","ENSMUSG00000098380","Mir6939","Gm27498|mmu-mir-6939","microRNA 6939","ncRNA"]
[2962,"chr7",79515203,79516066,"+",0,"NA","non-coding (NR_040312, exon 1 of 4)","non-coding (NR_040312, exon 1 of 4)",199,"NR_040312",101694,"Mm.41661","NR_040311","ENSMUSG00000097023","AI854517","-","expressed sequence AI854517","ncRNA"]
[2664,"chr5",135168037,135168945,"+",0,"NA","5' UTR (NM_009745, exon 1 of 6)","5' UTR (NM_009745, exon 1 of 6)",119,"NM_009745",12054,"Mm.405834","NM_009745","ENSMUSG00000029681","Bcl7b","-","B cell CLL/lymphoma 7B","protein-coding"]
[616,"chr11",101155720,101156340,"+",0,"NA","5' UTR (NM_134028, exon 1 of 11)","5' UTR (NM_134028, exon 1 of 11)",146,"NM_134028",103768,"Mm.142348","NM_134028","ENSMUSG00000045007","Tubg2","AI504772|Tubgl","tubulin, gamma 2","protein-coding"]
[640,"chr11",105291814,105292983,"+",0,"NA","promoter-TSS (NM_008626)","promoter-TSS (NM_008626)",-248,"NM_008626",17534,"Mm.235616","NM_008626","ENSMUSG00000020695","Mrc2","Endo180|mKIAA0709|uPARAP","mannose receptor, C type 2","protein-coding"]
[1121,"chr15",73090178,73090790,"+",0,"NA","promoter-TSS (NM_053068)","promoter-TSS (NM_053068)",72,"NM_053068",93696,"Mm.23095","NM_053068","ENSMUSG00000068391","Chrac1","2410152E03Rik|2810406L04Rik|YCL1","chromatin accessibility complex 1","protein-coding"]
[870,"chr13",36117297,36118108,"+",0,"NA","promoter-TSS (NM_001039189)","promoter-TSS (NM_001039189)",59,"NM_001039189",69955,"Mm.70690","NM_024274","ENSMUSG00000021420","Fars2","Fars1|pheRS","phenylalanine-tRNA synthetase 2 (mitochondrial)","protein-coding"]
[1384,"chr17",24804274,24804902,"+",0,"NA","intron (NM_029197, intron 1 of 13)","intron (NM_029197, intron 1 of 13)",206,"NM_029197",75178,"Mm.52592","NM_029197","ENSMUSG00000024155","Meiob","4930528F23Rik|MLZ-675","meiosis specific with OB domains","protein-coding"]
[896,"chr13",52582640,52583555,"+",0,"NA","promoter-TSS (NM_001198977)","promoter-TSS (NM_001198977)",-340,"NM_001198977",20963,"Mm.375031","NM_011518","ENSMUSG00000021457","Syk","Sykb","spleen tyrosine kinase","protein-coding"]
[1468,"chr17",45563719,45564629,"+",0,"NA","promoter-TSS (NM_028662)","promoter-TSS (NM_028662)",22,"NM_028662",73836,"Mm.289716","NM_028662","ENSMUSG00000037089","Slc35b2","1110003M08Rik|AA407792|AI842275|PAPST1|Slc35b1","solute carrier family 35, member B2","protein-coding"]
[3184,"chr8",79711441,79712043,"+",0,"NA","promoter-TSS (NM_015751)","promoter-TSS (NM_015751)",-2,"NM_015751",24015,"Mm.5831","NM_015751","ENSMUSG00000058355","Abce1","C79080|Oabp|RLI|RNS41|Rnaseli","ATP-binding cassette, sub-family E (OABP), member 1","protein-coding"]
[2068,"chr2",178413189,178415007,"+",0,"NA","promoter-TSS (NM_001081289)","promoter-TSS (NM_001081289)",365,"NM_001085501",228966,"Mm.472736","NM_001085501","ENSMUSG00000049999","Ppp1r3d","2610024M03Rik|Gm359","protein phosphatase 1, regulatory subunit 3D","protein-coding"]
[1726,"chr19",40830940,40831916,"+",0,"NA","5' UTR (NM_172839, exon 1 of 6)","5' UTR (NM_172839, exon 1 of 6)",149,"NM_172839",240665,"Mm.309","NM_172839","ENSMUSG00000025010","Ccnj","D430039C20Rik","cyclin J","protein-coding"]
[2903,"chr7",28559971,28561075,"+",0,"NA","TTS (NR_106016)","TTS (NR_106016)",461,"NR_106016",102466795,null,"NR_106016","ENSMUSG00000098558","Mir7049","Gm27277|mmu-mir-7049","microRNA 7049","ncRNA"]
[1464,"chr17",43016413,43017205,"+",0,"NA","5' UTR (NM_178589, exon 1 of 6)","5' UTR (NM_178589, exon 1 of 6)",254,"NM_178589",94185,"Mm.200792","NM_178589","ENSMUSG00000023915","Tnfrsf21","AA959878|DR6|R74815|TR7","tumor necrosis factor receptor superfamily, member 21","protein-coding"]
[2165,"chr3",98382162,98382903,"+",0,"NA","promoter-TSS (NM_172863)","promoter-TSS (NM_172863)",51,"NM_172863",242109,"Mm.358911","NM_172863","ENSMUSG00000050064","Zfp697","9430053K19|AI467503|Znf697","zinc finger protein 697","protein-coding"]
[2347,"chr4",126262161,126262865,"+",0,"NA","exon (NM_013718, exon 1 of 5)","exon (NM_013718, exon 1 of 5)",108,"NM_013718",27096,"Mm.8392","NM_013718","ENSMUSG00000028847","Trappc3","1110058K12Rik|AI835942|AU019197|Bet3","trafficking protein particle complex 3","protein-coding"]
[1494,"chr17",56717029,56718106,"+",0,"NA","promoter-TSS (NM_178926)","promoter-TSS (NM_178926)",132,"NM_001166474",106639,"Mm.37290","NM_178926","ENSMUSG00000054723","Vmac","AI662250","vimentin-type intermediate filament associated coiled-coil protein","protein-coding"]
[3440,"chr9",100642867,100643729,"+",0,"NA","promoter-TSS (NM_009282)","promoter-TSS (NM_009282)",-325,"NM_009282",20842,"Mm.42135","NM_009282","ENSMUSG00000037286","Stag1","AU045003|SA-1|Scc3","stromal antigen 1","protein-coding"]
[777,"chr12",83687947,83688783,"+",0,"NA","promoter-TSS (NM_008943)","promoter-TSS (NM_008943)",-198,"NM_008943",19164,"Mm.998","NM_008943","ENSMUSG00000019969","Psen1","Ad3h|PS-1|PS1|S182","presenilin 1","protein-coding"]
[3426,"chr9",83834360,83835101,"+",0,"NA","promoter-TSS (NM_001284272)","promoter-TSS (NM_001284272)",41,"NM_001284272",22137,"Mm.1904","NM_009445","ENSMUSG00000038379","Ttk","AL022661|Esk1|Mps1|PYT|esk","Ttk protein kinase","protein-coding"]
[2018,"chr2",156862719,156863697,"+",0,"NA","promoter-TSS (NM_026124)","promoter-TSS (NM_026124)",86,"NM_026124",67388,"Mm.29264","NM_026124","ENSMUSG00000027637","1110008F13Rik","AI316789","RIKEN cDNA 1110008F13 gene","protein-coding"]
[1906,"chr2",75658818,75659306,"+",0,"NA","promoter-TSS (NM_198090)","promoter-TSS (NM_198090)",-197,"NM_146130",229279,"Mm.316306","NM_053263","ENSMUSG00000059005","Hnrnpa3","2410013L13Rik|2610209F03Rik|2610510D13Rik|Hnrpa3","heterogeneous nuclear ribonucleoprotein A3","protein-coding"]
[2786,"chr6",84019028,84019654,"+",0,"NA","promoter-TSS (NM_021469)","promoter-TSS (NM_021469)",-45,"NM_001310152",26903,"Mm.220982","NM_021469","ENSMUSG00000033788","Dysf","2310004N10Rik|AI604795|D6Pas3","dysferlin","protein-coding"]
[464,"chr11",61021797,61023036,"+",0,"NA","promoter-TSS (NM_001267593)","promoter-TSS (NM_001267593)",-148,"NM_001267593",16515,"Mm.4970","NM_010603",null,"Kcnj12","IRK-2|IRK2|Kir2.2|MB-IRK2","potassium inwardly-rectifying channel, subfamily J, member 12","protein-coding"]
[3235,"chr8",105305340,105306101,"+",0,"NA","TTS (NM_148952)","TTS (NM_148952)",119,"NM_172760",234683,"Mm.237966","NM_172760","ENSMUSG00000014791","Elmo3","9930107J06|BC058752|CED-12|Ced12","engulfment and cell motility 3","protein-coding"]
[2977,"chr7",82648283,82648898,"+",0,"NA","promoter-TSS (NM_001159672)","promoter-TSS (NM_001159672)",-24,"NM_001159672",101592,"Mm.238020","NM_175317","ENSMUSG00000038563","Eftud1","4932434J20Rik|6030468D11Rik|AI451340|AU019507|AU022896|D7Ertd791e","elongation factor Tu GTP binding domain containing 1","protein-coding"]
[1672,"chr19",7268180,7269574,"+",0,"NA","promoter-TSS (NM_054048)","promoter-TSS (NM_054048)",-887,"NM_054048",104383,"Mm.283859","NM_054048","ENSMUSG00000024968","Rcor2","1A13|AW122124|CoREST|Rcor|Rcor1","REST corepressor 2","protein-coding"]
[2325,"chr4",116685412,116686080,"+",0,"NA","non-coding (NR_040442, exon 2 of 3)","intron (NM_011034, intron 1 of 5)",147,"NM_011034",18477,"Mm.30929","NM_011034",null,"Prdx1","MSP23|NkefA|OSF-3|OSF3|PAG|Paga|PrdxI|PrxI|TDX2|TPxA|Tdpx2|prx1","peroxiredoxin 1","protein-coding"]
[1685,"chr19",8988958,8989903,"+",0,"NA","intron (NM_009643, intron 1 of 4)","CpG",146,"NM_001286518",66395,"Mm.203866","NM_009643","ENSMUSG00000069833","Ahnak","DY6","AHNAK nucleoprotein (desmoyokin)","protein-coding"]
[2011,"chr2",156143851,156144506,"+",0,"NA","promoter-TSS (NM_025946)","promoter-TSS (NM_025946)",8,"NM_010911",18041,"Mm.283604","NM_010911","ENSMUSG00000027618","Nfs1","AA987187|m-Nfs1|m-Nfsl","nitrogen fixation gene 1 (S. cerevisiae)","protein-coding"]
[1891,"chr2",69897189,69898005,"+",0,"NA","exon (NM_177783, exon 1 of 39)","exon (NM_177783, exon 1 of 39)",351,"NM_177783",68795,"Mm.314576","NM_177783","ENSMUSG00000044308","Ubr3","1110059H15Rik|4833421P10Rik|A130030D10Rik|AA409735|AA414972|AA422631|AI646861|AU016126|Zfp650|Znf650","ubiquitin protein ligase E3 component n-recognin 3","protein-coding"]
[3452,"chr9",106368302,106369531,"+",0,"NA","exon (NM_153459, exon 1 of 3)","exon (NM_153459, exon 1 of 3)",284,"NM_153459",235584,"Mm.275584","NM_153459","ENSMUSG00000053716","Dusp7","AU015694|Mkpx|Pyst2","dual specificity phosphatase 7","protein-coding"]
[6,"chr1",9747609,9748434,"+",0,"NA","exon (NM_173443, exon 1 of 3)","exon (NM_173443, exon 1 of 3)",361,"NM_173443",70675,"Mm.274493","NM_173443","ENSMUSG00000045210","Vcpip1","4932442A08|5730421J18Rik|5730538E15Rik|VCIP135|mKIAA1850","valosin containing protein (p97)/p47 complex interacting protein 1","protein-coding"]
[2768,"chr6",61180052,61181165,"+",0,"NA","5' UTR (NM_183310, exon 1 of 11)","5' UTR (NM_183310, exon 1 of 11)",202,"NR_040287",100504262,"Mm.438066","NR_040287",null,"A730020E08Rik","-","RIKEN cDNA A730020E08 gene","ncRNA"]
[562,"chr11",84879691,84881078,"+",0,"NA","promoter-TSS (NM_027388)","promoter-TSS (NM_027388)",-99,"NM_001077636",70325,"Mm.390414","NM_027388","ENSMUSG00000045140","Pigw","2610044A17Rik|Gwt1","phosphatidylinositol glycan anchor biosynthesis, class W","protein-coding"]
[1304,"chr16",33056291,33057150,"+",0,"NA","promoter-TSS (NM_178378)","promoter-TSS (NM_178378)",206,"NM_021338",57808,"Mm.19355","NM_021338","ENSMUSG00000060636","Rpl35a","2810431L15Rik|Rpl35","ribosomal protein L35A","protein-coding"]
[2327,"chr4",116995301,116996109,"+",0,"NA","exon (NM_175244, exon 1 of 21)","exon (NM_175244, exon 1 of 21)",357,"NM_175244",76608,"Mm.251420","NM_175244","ENSMUSG00000046861","Hectd3","1700064K09Rik|AI467540|AW743312","HECT domain containing 3","protein-coding"]
[2269,"chr4",46343605,46344345,"+",0,"NA","promoter-TSS (NM_183298)","promoter-TSS (NM_183298)",-219,"NM_183298",110805,"Mm.354634","NM_183298",null,"Foxe1","Titf2","forkhead box E1","protein-coding"]
[1102,"chr15",39005923,39006859,"+",0,"NA","promoter-TSS (NM_008056)","promoter-TSS (NM_008056)",58,"NM_008056",14368,"Mm.4769","NM_008056","ENSMUSG00000022297","Fzd6","Fz6","frizzled homolog 6 (Drosophila)","protein-coding"]
[183,"chr1",194619382,194620943,"+",0,"NA","5' UTR (NM_008882, exon 1 of 32)","5' UTR (NM_008882, exon 1 of 32)",333,"NM_008882",18845,"Mm.2251","NM_008882","ENSMUSG00000026640","Plxna2","2810428A13Rik|AA589422|AW457381|OCT|PlexA2|Plxn2|mKIAA0463","plexin A2","protein-coding"]
[3189,"chr8",83666210,83666995,"+",0,"NA","promoter-TSS (NM_013641)","promoter-TSS (NM_013641)",-38,"NM_013641",19216,"Mm.213000","NM_013641",null,"Ptger1","42kDa|EP1|Ptgerep1","prostaglandin E receptor 1 (subtype EP1)","protein-coding"]
[3179,"chr8",74993587,74994236,"+",0,"NA","intron (NM_178017, intron 1 of 10)","CpG",261,"NM_178017",70823,"Mm.261739","NM_178017","ENSMUSG00000034518","Hmgxb4","4733401K04Rik|AI316803|Hmgb2l1","HMG box domain containing 4","protein-coding"]
[2544,"chr5",73292717,73293326,"+",0,"NA","intron (NM_001159887, intron 1 of 7)","CpG",227,"NM_001159888",68095,"Mm.247039","NM_023429","ENSMUSG00000029152","Ociad1","6030432N09Rik|AI481327|AW557942|Asrij|B230209J16Rik|BB021357|Emi2|Imi2|OCIA|TPA018","OCIA domain containing 1","protein-coding"]
[1478,"chr17",47694929,47695693,"+",0,"NA","promoter-TSS (NM_001290337)","promoter-TSS (NM_001290337)",104,"NM_144939",107971,"Mm.392206","NM_144939","ENSMUSG00000023266","Frs3","4930417B13Rik|AI449674|Frs2beta|Snt2","fibroblast growth factor receptor substrate 3","protein-coding"]
[2541,"chr5",67306695,67307556,"+",0,"NA","exon (NM_178651, exon 1 of 18)","exon (NM_178651, exon 1 of 18)",170,"NM_001310629",109108,"Mm.234455","NM_178651",null,"Slc30a9","2310024J23Rik|AL024256|GAC63|HUEL|znT-9","solute carrier family 30 (zinc transporter), member 9","protein-coding"]
[439,"chr11",54303732,54304595,"+",0,"NA","promoter-TSS (NM_001033597)","promoter-TSS (NM_001033597)",-41,"NM_144823",216739,"Mm.267478","NM_144823","ENSMUSG00000020333","Acsl6","A330035H04Rik|AW050338|Facl6|LACS|Lacsl|mKIAA0837","acyl-CoA synthetase long-chain family member 6","protein-coding"]
[362,"chr10",127266181,127266981,"+",0,"NA","intron (NM_027151, intron 1 of 13)","CpG",319,"NM_001190453",69654,"Mm.167537","NM_027151","ENSMUSG00000025410","Dctn2","2310042E05Rik|C130077D06Rik|C87049|DCTN-50|GMP23-48K|RBP50|p50","dynactin 2","protein-coding"]
[1379,"chr17",24657032,24657502,"+",0,"NA","TTS (NM_001099664)","TTS (NM_001099664)",1158,"NM_001099664",381073,"Mm.291772","NM_001099664","ENSMUSG00000071230","Npw","Gm935","neuropeptide W","protein-coding"]
[2607,"chr5",115429612,115430144,"+",0,"NA","intron (NM_008629, intron 1 of 14)","CpG",193,"NM_008629",17690,"Mm.5077","NM_008629","ENSMUSG00000054256","Msi1","Msi1h|Musahi1|m-Msi-1","musashi RNA-binding protein 1","protein-coding"]
[1593,"chr18",65430944,65431598,"+",0,"NA","exon (NM_172833, exon 1 of 16)","exon (NM_172833, exon 1 of 16)",274,"NM_172833",240354,"Mm.132613","NM_172833","ENSMUSG00000032688","Malt1","A630046N12|D430033E09Rik","MALT1 paracaspase","protein-coding"]
[705,"chr11",120721205,120722679,"+",0,"NA","TTS (NM_153545)","TTS (NM_153545)",474,"NM_133223",170758,"Mm.34008","NM_133223","ENSMUSG00000018012","Rac3","Rac1B","RAS-related C3 botulinum substrate 3","protein-coding"]
[3345,"chr9",40685838,40686623,"+",0,"NA","5' UTR (NM_133733, exon 1 of 7)","5' UTR (NM_133733, exon 1 of 7)",266,"NM_133733",71566,"Mm.280560","NM_133733","ENSMUSG00000032024","Clmp","9030425E11Rik|ACAM|ASP5|AW557819","CXADR-like membrane protein","protein-coding"]
[1720,"chr19",36554168,36555320,"+",0,"NA","5' UTR (NM_001163471, exon 1 of 21)","5' UTR (NM_001163471, exon 1 of 21)",105,"NM_172637",226098,"Mm.61107","NM_172637","ENSMUSG00000041180","Hectd2","4921524L07|A630025O09Rik|AW212605","HECT domain containing 2","protein-coding"]
[3053,"chr7",128611252,128612069,"+",0,"NA","exon (NM_178641, exon 1 of 20)","exon (NM_178641, exon 1 of 20)",295,"NM_178641",101490,"Mm.490344","NM_178641","ENSMUSG00000042105","Inpp5f","5830435P03Rik|AI115354|AW561896|SAC2|cI-27|mKIAA0966","inositol polyphosphate-5-phosphatase F","protein-coding"]
[2206,"chr3",139205353,139206034,"+",0,"NA","promoter-TSS (NM_198659)","promoter-TSS (NM_198659)",-200,"NM_198659",381476,"Mm.188334","NM_198659","ENSMUSG00000047940","Stpg2","B930007M17Rik|Gm1017","sperm tail PG rich repeat containing 2","protein-coding"]
[2496,"chr5",31048290,31048952,"+",0,"NA","promoter-TSS (NM_001177621)","promoter-TSS (NM_001177621)",-19,"NM_212470",381629,"Mm.28144","NM_027855","ENSMUSG00000013622","Atraid","0610007C21Rik|AI316792|Apr3|HSPC013|p18","all-trans retinoic acid induced differentiation factor","protein-coding"]
[2177,"chr3",106547256,106548186,"+",0,"NA","promoter-TSS (NM_133869)","promoter-TSS (NM_133869)",-77,"NM_001286986",67171,"Mm.290488","NM_026013","ENSMUSG00000027900","Dram2","2010305N14Rik|2610318G18Rik|AI647667|Tmem77","DNA-damage regulated autophagy modulator 2","protein-coding"]
[407,"chr11",32455083,32456085,"+",0,"NA","intron (NM_173784, intron 1 of 2)","CpG",212,"NM_173784",327900,"Mm.260956","NM_173784",null,"Ubtd2","4930571L24|9630054F20Rik|AI645720","ubiquitin domain containing 2","protein-coding"]
[18,"chr1",36778574,36779395,"+",0,"NA","promoter-TSS (NM_001289612)","promoter-TSS (NM_001289612)",0,"NM_001289612",22637,"Mm.8038","NM_009539","ENSMUSG00000026117","Zap70","Srk|ZAP-70|mrtle|mur","zeta-chain (TCR) associated protein kinase","protein-coding"]
[376,"chr11",4160095,4160745,"+",0,"NA","promoter-TSS (NM_177616)","promoter-TSS (NM_177616)",66,"NM_026175",67465,"Mm.156914","NM_026175","ENSMUSG00000002129","Sf3a1","1200014H24Rik|5930416L09Rik|AI159724","splicing factor 3a, subunit 1","protein-coding"]
[912,"chr13",58157471,58158023,"+",0,"NA","promoter-TSS (NM_001048060)","promoter-TSS (NM_001048060)",98,"NM_198004",75731,"Mm.293919","NM_198004","ENSMUSG00000050002","Idnk","5133401N09Rik","idnK gluconokinase homolog (E. coli)","protein-coding"]
[1432,"chr17",31677119,31678719,"+",0,"NA","promoter-TSS (NM_013501)","promoter-TSS (NM_013501)",-12,"NM_013501",12954,"Mm.1228","NM_013501","ENSMUSG00000024041","Cryaa","Acry-1|Crya-1|Crya1|DAcry-1|lop18","crystallin, alpha A","protein-coding"]
[785,"chr12",84875628,84876289,"+",0,"NA","exon (NM_013589, exon 1 of 35)","exon (NM_013589, exon 1 of 35)",156,"NR_028577",100303738,"Mm.479389","NR_028577",null,"D030025P21Rik","-","RIKEN cDNA D030025P21 gene","ncRNA"]
[1930,"chr2",105676128,105676836,"+",0,"NA","5' UTR (NM_001244202, exon 1 of 12)","5' UTR (NM_001244202, exon 1 of 12)",353,"NM_001244202",18508,"Mm.3608","NM_013627","ENSMUSG00000027168","Pax6","1500038E17Rik|AEY11|Dey|Gsfaey11|Pax-6|Sey","paired box 6","protein-coding"]
[599,"chr11",98004779,98005480,"+",0,"NA","exon (NM_001159319, exon 13 of 13)","exon (NM_001159319, exon 13 of 13)",-8956,"NM_207231",217151,"Mm.277896","NM_207231","ENSMUSG00000038352","Arl5c","Arl12|BC065791","ADP-ribosylation factor-like 5C","protein-coding"]
[1393,"chr17",25272903,25274452,"+",0,"NA","promoter-TSS (NM_001177610)","promoter-TSS (NM_001177610)",237,"NM_001177609",22196,"Mm.240044","NM_011665",null,"Ube2i","5830467E05Rik|F830028O17Rik|UBC9|Ubce2i|Ubce9","ubiquitin-conjugating enzyme E2I","protein-coding"]
[1167,"chr15",79892095,79892688,"+",0,"NA","promoter-TSS (NM_030255)","promoter-TSS (NM_030255)",-17,"NM_001160415",80287,"Mm.284059","NM_030255","ENSMUSG00000009585","Apobec3","Apobec|Arp3|BC003314|Cem15|Rfv3","apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3","protein-coding"]
[587,"chr11",94629577,94630363,"+",0,"NA","5' UTR (NM_133807, exon 1 of 7)","5' UTR (NM_133807, exon 1 of 7)",146,"NM_133807",98238,"Mm.172720","NM_133807","ENSMUSG00000020869","Lrrc59","AA959742|C78668","leucine rich repeat containing 59","protein-coding"]
[609,"chr11",99040934,99041931,"+",0,"NA","5' UTR (NM_010517, exon 1 of 4)","5' UTR (NM_010517, exon 1 of 4)",172,"NM_010517",16010,"Mm.233799","NM_010517",null,"Igfbp4","AI875747|Deb2|IGFBP-4","insulin-like growth factor binding protein 4","protein-coding"]
[1235,"chr15",103502550,103503403,"+",0,"NA","promoter-TSS (NM_008800)","promoter-TSS (NM_008800)",-58,"NM_008800",18574,"Mm.390792","NM_008800","ENSMUSG00000022489","Pde1b","Pde1b1","phosphodiesterase 1B, Ca2+-calmodulin dependent","protein-coding"]
[298,"chr10",80854662,80856151,"+",0,"NA","promoter-TSS (NM_025349)","promoter-TSS (NM_025349)",131,"NM_175195",73218,"Mm.3285","NM_175195","ENSMUSG00000035206","Sppl2b","3110056O03Rik|AW550292|PSL1","signal peptide peptidase like 2B","protein-coding"]
[95,"chr1",93825153,93825743,"+",0,"NA","5' UTR (NM_001310767, exon 1 of 10)","5' UTR (NM_001310767, exon 1 of 10)",208,"NM_001310767",98314,"Mm.383401","NM_178882","ENSMUSG00000073609","D2hgdh","AA408776|AA408778|AI325464","D-2-hydroxyglutarate dehydrogenase","protein-coding"]
[3291,"chr8",122475522,122476552,"+",0,"NA","promoter-TSS (NM_001033142)","promoter-TSS (NM_001033142)",27,"NM_001033142",68718,"Mm.34356","NM_001033142","ENSMUSG00000014470","Rnf166","1110031E24Rik|AW555115|Zfp313l","ring finger protein 166","protein-coding"]
[923,"chr13",73536042,73537113,"+",0,"NA","promoter-TSS (NM_010020)","promoter-TSS (NM_010020)",-170,"NM_010020",13162,"Mm.41993","NM_010020","ENSMUSG00000021609","Slc6a3","DAT|Dat1","solute carrier family 6 (neurotransmitter transporter, dopamine), member 3","protein-coding"]
[3373,"chr9",54586365,54587076,"+",0,"NA","intron (NM_029573, intron 1 of 10)","CpG",209,"NM_029573",67834,"Mm.279195","NM_029573","ENSMUSG00000032279","Idh3a","1110003P10Rik|1500012E04Rik|AA407078|AI316514","isocitrate dehydrogenase 3 (NAD+) alpha","protein-coding"]
[243,"chr10",67126521,67127416,"+",0,"NA","promoter-TSS (NM_207221)","promoter-TSS (NM_207221)",-290,"NM_207221",108829,"Mm.23846","NM_207221","ENSMUSG00000037876","Jmjd1c","5430433L24Rik|D630035I23Rik|Jmjdic|TRIP8","jumonji domain containing 1C","protein-coding"]
[2051,"chr2",167421566,167422298,"+",0,"NA","intron (NR_130767, intron 1 of 13)","CpG",222,"NM_001304542",77031,"Mm.278924","NM_148929","ENSMUSG00000039463","Slc9a8","1200006P13Rik|6430709P13Rik|AI182282|NHE-8|NHE8","solute carrier family 9 (sodium/hydrogen exchanger), member 8","protein-coding"]
[2682,"chr5",138194191,138195268,"+",0,"NA","TTS (NM_178612)","TTS (NM_178612)",415,"NM_177878",330216,"Mm.19719","NM_177878","ENSMUSG00000049285","Mblac1","-","metallo-beta-lactamase domain containing 1","protein-coding"]
[148,"chr1",167308262,167309020,"+",0,"NA","promoter-TSS (NM_001039483)","promoter-TSS (NM_001039483)",-29,"NM_001039483",68944,"Mm.330045","NM_026881","ENSMUSG00000052428","Tmco1","1190006A08Rik|4930403O06Rik|AA109065|AU022572|ESTM39","transmembrane and coiled-coil domains 1","protein-coding"]
[753,"chr12",69371715,69373275,"+",0,"NA","5' UTR (NM_007481, exon 2 of 2)","5' UTR (NM_007481, exon 2 of 2)",345,"NM_007481",11845,"Mm.27308","NM_007481","ENSMUSG00000044147","Arf6","AI788669|AW496366","ADP-ribosylation factor 6","protein-coding"]
[1343,"chr16",93683033,93684033,"+",0,"NA","exon (NM_173047, exon 1 of 3)","exon (NM_173047, exon 1 of 3)",314,"NM_173047",109857,"Mm.4512","NM_173047","ENSMUSG00000022947","Cbr3","1110001J05Rik|C81353","carbonyl reductase 3","protein-coding"]
[2489,"chr5",30232478,30233103,"+",0,"NA","exon (NM_027652, exon 1 of 10)","exon (NM_027652, exon 1 of 10)",172,"NM_027652",28042,"Mm.168854","NM_027652","ENSMUSG00000075703","Ept1","4933402G07Rik|AI448296|AI452230|C79563|D5Wsu178e|SELI|mKIAA1724","ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)","protein-coding"]
[2655,"chr5",129895553,129896042,"+",0,"NA","promoter-TSS (NM_183088)","promoter-TSS (NM_183088)",74,"NM_183088",71970,"Mm.422716","NM_183088","ENSMUSG00000034173","Zbed5","2410018M08Rik|Scand3","zinc finger, BED type containing 5","protein-coding"]
[2404,"chr4",139193088,139194267,"+",0,"NA","promoter-TSS (NM_001271405)","promoter-TSS (NM_001271405)",-434,"NM_001271405",12345,"Mm.2945","NM_009798","ENSMUSG00000028745","Capzb","1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1","capping protein (actin filament) muscle Z-line, beta","protein-coding"]
[726,"chr12",8973782,8974399,"+",0,"NA","promoter-TSS (NM_001159527)","promoter-TSS (NM_001159527)",89,"NM_172470",74682,"Mm.87389","NM_172470","ENSMUSG00000066643","Wdr35","4930459M12Rik|4931430C06|mKIAA1336","WD repeat domain 35","protein-coding"]
[2509,"chr5",33995825,33997267,"+",0,"NA","5' UTR (NM_001001985, exon 1 of 3)","5' UTR (NM_001001985, exon 1 of 3)",562,"NM_001001985",269642,"Mm.274610","NM_001001985","ENSMUSG00000048142","Nat8l","1110038O08Rik|Shati","N-acetyltransferase 8-like","protein-coding"]
[2955,"chr7",66839638,66840717,"+",0,"NA","intron (NM_001033877, intron 1 of 22)","CpG",442,"NM_001033877",233332,"Mm.445763","NM_001033877","ENSMUSG00000058145","Adamts17","AU023434","a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17","protein-coding"]
[2703,"chr5",143235010,143235777,"+",0,"NA","TTS (NR_040700)","TTS (NR_040700)",230,"NM_177681",231866,"Mm.55211","NM_177681","ENSMUSG00000029587","Zfp12","C530015C18|Krox-7|Zfp-12|Znf12","zinc finger protein 12","protein-coding"]
[2171,"chr3",102469723,102470160,"+",0,"NA","promoter-TSS (NM_001112698)","promoter-TSS (NM_001112698)",22,"NM_013609",18049,"Mm.1259","NM_013609","ENSMUSG00000027859","Ngf","Ngfb","nerve growth factor","protein-coding"]
[2611,"chr5",117318680,117319691,"+",0,"NA","promoter-TSS (NM_001033311)","promoter-TSS (NM_001033311)",-81,"NM_001033311",231668,"Mm.298603","NM_001033311","ENSMUSG00000066894","Vsig10","-","V-set and immunoglobulin domain containing 10","protein-coding"]
[106,"chr1",130716874,130717979,"+",0,"NA","promoter-TSS (NM_178691)","promoter-TSS (NM_178691)",99,"NM_178691",226418,"Mm.106553","NM_178691",null,"Yod1","9930028C20Rik|Hshin7","YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)","protein-coding"]
[157,"chr1",178318701,178319291,"+",0,"NA","promoter-TSS (NM_025511)","promoter-TSS (NM_025511)",-157,"NM_025511",66359,"Mm.489720","NM_025511","ENSMUSG00000026500","Cox20","2310005N03Rik|Fam36a","COX20 Cox2 chaperone","protein-coding"]
[964,"chr14",8098118,8098682,"+",0,"NA","exon (NM_178279, exon 1 of 19)","exon (NM_178279, exon 1 of 19)",187,"NM_178279",218699,"Mm.29515","NM_145458","ENSMUSG00000033885","Pxk","C230080L11Rik|D14Ertd813e|MONaKA","PX domain containing serine/threonine kinase","protein-coding"]
[2009,"chr2",156018558,156019284,"+",0,"NA","TTS (NM_001136556)","TTS (NM_001136556)",10796,"NM_025516",66366,"Mm.141276","NM_025516","ENSMUSG00000005881","Ergic3","2310015B14Rik|AV318804|CGI-54|D2Ucla1|NY-BR-84|Sdbcag84","ERGIC and golgi 3","protein-coding"]
[65,"chr1",78310060,78310803,"+",0,"NA","promoter-TSS (NM_001004173)","promoter-TSS (NM_001004173)",85,"NM_001004173",433323,"Mm.276248","NM_001004173","ENSMUSG00000032908","Sgpp2","SPPase2|Spp2","sphingosine-1-phosphate phosphotase 2","protein-coding"]
[1909,"chr2",79635389,79636007,"+",0,"NA","exon (NM_080558, exon 1 of 18)","exon (NM_080558, exon 1 of 18)",273,"NM_080558",70599,"Mm.272881","NM_080558","ENSMUSG00000027007","Ssfa2","5730488C15Rik|CS-1|CS1|KRAP|SPAG13|mKIAA1927","sperm specific antigen 2","protein-coding"]
[935,"chr13",92610498,92611846,"+",0,"NA","promoter-TSS (NM_172588)","promoter-TSS (NM_172588)",34,"NM_172588",218442,"Mm.297970","NM_172588","ENSMUSG00000021703","Serinc5","A130038L21Rik|AIGP3|C86123|TPO1","serine incorporator 5","protein-coding"]
[203,"chr10",26077830,26079162,"+",0,"NA","non-coding (NR_028030, exon 1 of 1)","non-coding (NR_028030, exon 1 of 1)",241,"NR_028030",100040851,"Mm.478630","NR_028030","ENSMUSG00000039098","Gm9767","ENSMUSG00000039098","predicted gene 9767","ncRNA"]
[2627,"chr5",122391715,122392635,"+",0,"NA","intron (NM_019824, intron 1 of 6)","intron (NM_019824, intron 1 of 6)",247,"NM_019824",56378,"Mm.275942","NM_019824","ENSMUSG00000029465","Arpc3","1110006A04Rik|21kDa|AA408672|AI788639|p21-Ar|p21Arc","actin related protein 2/3 complex, subunit 3","protein-coding"]
[1213,"chr15",99223952,99225164,"+",0,"NA","promoter-TSS (NM_010601)","promoter-TSS (NM_010601)",-418,"NM_010601",16512,"Mm.374793","NM_010601","ENSMUSG00000037579","Kcnh3","AU019351|C030044P22Rik|Elk2|Kv12.2|Melk2","potassium voltage-gated channel, subfamily H (eag-related), member 3","protein-coding"]
[1093,"chr15",30172336,30173563,"+",0,"NA","5' UTR (NM_008729, exon 1 of 23)","5' UTR (NM_008729, exon 1 of 23)",356,"NM_008729",18163,"Mm.321648","NM_008729","ENSMUSG00000022240","Ctnnd2","Catnd2|Nprap|neurojugin","catenin (cadherin associated protein), delta 2","protein-coding"]
[81,"chr1",91179669,91180341,"+",0,"NA","5' UTR (NM_001168392, exon 1 of 4)","5' UTR (NM_001168392, exon 1 of 4)",183,"NM_001168392",51801,"Mm.3272","NM_016894","ENSMUSG00000034353","Ramp1","9130218E19Rik","receptor (calcitonin) activity modifying protein 1","protein-coding"]
[1023,"chr14",54631976,54632762,"+",0,"NA","exon (NM_199470, exon 12 of 12)","exon (NM_199470, exon 12 of 12)",7059,"NM_175204",73902,"Mm.32009","NM_175204","ENSMUSG00000072423","Psmb11","5830406J20Rik|beta5t","proteasome (prosome, macropain) subunit, beta type, 11","protein-coding"]
[2742,"chr6",38433177,38434724,"+",0,"NA","promoter-TSS (NM_177185)","promoter-TSS (NM_177185)",25,"NM_177185",320538,"Mm.302831","NM_177185","ENSMUSG00000038538","Ubn2","2900060J04Rik|6030408G03Rik|BC060116|D130059P03Rik|mKIAA2030","ubinuclein 2","protein-coding"]
[2473,"chr5",21736990,21737496,"+",0,"NA","promoter-TSS (NM_028431)","promoter-TSS (NM_028431)",83,"NM_028431",73078,"Mm.301655","NM_028431","ENSMUSG00000029017","Pmpcb","3110004O18Rik|MPP11|MPPB|MPPP52","peptidase (mitochondrial processing) beta","protein-coding"]
[2084,"chr3",14578496,14579247,"+",0,"NA","exon (NM_007892, exon 1 of 8)","exon (NM_007892, exon 1 of 8)",200,"NM_007892",13559,"Mm.153415","NM_007892","ENSMUSG00000027552","E2f5","AU024671|E2F-5","E2F transcription factor 5","protein-coding"]
[1300,"chr16",32430560,32431348,"+",0,"NA","promoter-TSS (NM_001163160)","promoter-TSS (NM_001163160)",33,"NM_009981",13026,"Mm.98775","NM_009981","ENSMUSG00000005615","Pcyt1a","CTalpha|Cctalpha|Ctpct|Cttalpha","phosphate cytidylyltransferase 1, choline, alpha isoform","protein-coding"]
[1199,"chr15",89322520,89323466,"+",0,"NA","5' UTR (NM_182928, exon 1 of 3)","5' UTR (NM_182928, exon 1 of 3)",273,"NM_182928",223780,"Mm.210541","NM_182928","ENSMUSG00000054136","Adm2","Am2|IMD|Imdn","adrenomedullin 2","protein-coding"]
[86,"chr1",91539630,91541392,"+",0,"NA","promoter-TSS (NM_001039126)","promoter-TSS (NM_001039126)",-54,"NM_001039126",65247,"Mm.234152","NM_023046",null,"Asb1","1700029O08Rik|1700054C17Rik|AI426616|AI851378|mKIAA1146","ankyrin repeat and SOCS box-containing 1","protein-coding"]
[624,"chr11",102229378,102230521,"+",0,"NA","TTS (NR_106179)","TTS (NR_106179)",201,"NR_106179",102465892,null,"NR_106179","ENSMUSG00000098863","Mir8101","Gm27705|mmu-mir-8101","microRNA 8101","ncRNA"]
[2598,"chr5",114942057,114942509,"+",0,"NA","promoter-TSS (NM_028211)","promoter-TSS (NM_028211)",81,"NM_028211",72357,"Mm.292672","NM_028211",null,"2210016L21Rik","-","RIKEN cDNA 2210016L21 gene","protein-coding"]
[1158,"chr15",79108773,79109683,"+",0,"NA","5' UTR (NM_177461, exon 1 of 16)","5' UTR (NM_177461, exon 1 of 16)",245,"NM_177461",27008,"Mm.196480","NM_177461","ENSMUSG00000033039","Micall1","AI448246|D15Mit260|D15N2e|EST573322|EST820961|MIRab13|mKIAA1668","microtubule associated monooxygenase, calponin and LIM domain containing -like 1","protein-coding"]
[2170,"chr3",101376932,101377811,"+",0,"NA","intron (NM_207205, intron 1 of 10)","CpG",246,"NM_207205",78908,"Mm.257997","NM_207205","ENSMUSG00000042035","Igsf3","1700016K10Rik|2810035F16Rik|4833439O17Rik|mKIAA0466","immunoglobulin superfamily, member 3","protein-coding"]
[371,"chr10",128458515,128459543,"+",0,"NA","promoter-TSS (NM_001114097)","promoter-TSS (NM_001114097)",-207,"NM_001114096",68094,"Mm.417338","NM_198160","ENSMUSG00000025369","Smarcc2","5930405J04Rik","SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2","protein-coding"]
[656,"chr11",114851056,114852455,"+",0,"NA","promoter-TSS (NM_147217)","promoter-TSS (NM_147217)",215,"NM_001110338",70355,"Mm.242413","NM_147217","ENSMUSG00000051043","Gprc5c","1110028I06Rik|3200002M13Rik|Raig3","G protein-coupled receptor, family C, group 5, member C","protein-coding"]
[204,"chr10",28074403,28075533,"+",0,"NA","5' UTR (NM_008983, exon 1 of 32)","5' UTR (NM_008983, exon 1 of 32)",148,"NM_008983",19272,"Mm.332303","NM_008983","ENSMUSG00000019889","Ptprk","AI853699|PTPk|RPTPkappa","protein tyrosine phosphatase, receptor type, K","protein-coding"]
[2335,"chr4",123917268,123918161,"+",0,"NA","exon (NM_017475, exon 1 of 7)","exon (NM_017475, exon 1 of 7)",281,"NM_017475",54170,"Mm.220922","NM_017475","ENSMUSG00000028646","Rragc","AU041672|Gtr2|RAGC|TIB929|YGR163W","Ras-related GTP binding C","protein-coding"]
[1041,"chr14",63122401,63122937,"+",0,"NA","intron (NM_007798, intron 1 of 9)","CpG",207,"NM_007798",13030,"Mm.236553","NM_007798","ENSMUSG00000021939","Ctsb","CB","cathepsin B","protein-coding"]
[2921,"chr7",44532726,44534092,"+",0,"NA","exon (NM_011131, exon 25 of 27)","exon (NM_011131, exon 25 of 27)",-1338,"NM_019866",272382,"Mm.8012","NM_019866","ENSMUSG00000008193","Spib","Spi-B","Spi-B transcription factor (Spi-1/PU.1 related)","protein-coding"]
[3468,"chr9",108516602,108517334,"+",0,"NA","promoter-TSS (NM_001114119)","promoter-TSS (NM_001114119)",-119,"NM_001114119",69232,"Mm.335449","NM_175143","ENSMUSG00000006673","Qrich1","2610028H07Rik","glutamine-rich 1","protein-coding"]
[1990,"chr2",147012703,147013474,"+",0,"NA","promoter-TSS (NM_011917)","promoter-TSS (NM_011917)",28,"NM_011917",24128,"Mm.3065","NM_011917","ENSMUSG00000027433","Xrn2","-","5'-3' exoribonuclease 2","protein-coding"]
[435,"chr11",53519242,53520003,"+",0,"NA","promoter-TSS (NM_001252333)","promoter-TSS (NM_001252333)",-114,"NM_033144",20362,"Mm.274399","NM_033144","ENSMUSG00000018398","2008-09-01","AW046166|Sepl|mKIAA0202","septin 8","protein-coding"]
[3254,"chr8",108714365,108714808,"+",0,"NA","promoter-TSS (NM_007496)","promoter-TSS (NM_007496)",-58,"NM_007496",11906,"Mm.416972","NM_007496","ENSMUSG00000038872","Zfhx3","A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228","zinc finger homeobox 3","protein-coding"]
[814,"chr12",106010108,106010815,"+",0,"NA","intron (NM_011705, intron 1 of 14)","CpG",198,"NM_001029843",22367,"Mm.2981","NM_011705","ENSMUSG00000021115","Vrk1","51PK","vaccinia related kinase 1","protein-coding"]
[3195,"chr8",84147686,84148465,"+",0,"NA","promoter-TSS (NM_001163752)","promoter-TSS (NM_001163752)",37,"NM_029045",74666,"Mm.33625","NM_029045","ENSMUSG00000008129","4930432K21Rik","-","RIKEN cDNA 4930432K21 gene","protein-coding"]
[2492,"chr5",30814453,30815285,"+",0,"NA","5' UTR (NM_133350, exon 1 of 7)","5' UTR (NM_133350, exon 1 of 7)",228,"NM_133350",100732,"Mm.332295","NM_133350","ENSMUSG00000029166","Mapre3","AI790651|EB2|EB3|EBF3|RP3","microtubule-associated protein, RP/EB family, member 3","protein-coding"]
[1482,"chr17",53478785,53480121,"+",0,"NA","5' UTR (NM_025887, exon 1 of 6)","5' UTR (NM_025887, exon 1 of 6)",219,"NM_025887",271457,"Mm.329123","NM_025887","ENSMUSG00000017831","Rab5a","2410015H04Rik|AI663973|AU021172|nnyRab5a","RAB5A, member RAS oncogene family","protein-coding"]
[2109,"chr3",54692479,54693180,"+",0,"NA","promoter-TSS (NM_019995)","promoter-TSS (NM_019995)",-276,"NM_019995",56790,"Mm.486375","NM_019995","ENSMUSG00000027751","Supt20","AA667204|AI450544|D3Ertd300e|Fam48a|Supt20h|p38IP","suppressor of Ty 20","protein-coding"]
[885,"chr13",47193513,47194233,"+",0,"NA","promoter-TSS (NM_001170643)","promoter-TSS (NM_001170643)",-130,"NM_001170643",218215,"Mm.287609","NM_146042","ENSMUSG00000038068","Rnf144b","BC025007|E130105P19Rik|Ibrdc2|Pir2","ring finger protein 144B","protein-coding"]
[1412,"chr17",27856445,27857302,"+",0,"NA","intron (NM_001080769, intron 1 of 20)","CpG",366,"NM_001080769",224648,"Mm.291291","NM_001080769","ENSMUSG00000039512","Uhrf1bp1","1110020K19Rik|AA408674|F830021D11Rik|mKIAA4127","UHRF1 (ICBP90) binding protein 1","protein-coding"]
[884,"chr13",47122632,47123232,"+",0,"NA","intron (NM_146042, intron 1 of 7)","CpG",212,"NM_146042",218215,"Mm.287609","NM_146042","ENSMUSG00000038068","Rnf144b","BC025007|E130105P19Rik|Ibrdc2|Pir2","ring finger protein 144B","protein-coding"]
[1709,"chr19",25236512,25237762,"+",0,"NA","promoter-TSS (NM_181404)","promoter-TSS (NM_181404)",-65,"NM_181404",107351,"Mm.260722","NM_181404","ENSMUSG00000032702","Kank1","A930031B09Rik|AU015049|AW121052|Ankrd15|D330024H06Rik|mKIAA0172","KN motif and ankyrin repeat domains 1","protein-coding"]
[339,"chr10",107271848,107273028,"+",0,"NA","promoter-TSS (NM_001284329)","promoter-TSS (NM_001284329)",44,"NM_001284329",108030,"Mm.268025","NM_001033223","ENSMUSG00000019906","Lin7a","AI848705|LIN-7A|MALS-1|TIP-33|Veli|Veli1","lin-7 homolog A (C. elegans)","protein-coding"]
[228,"chr10",58446667,58447209,"+",0,"NA","promoter-TSS (NM_011240)","promoter-TSS (NM_011240)",86,"NM_011240",19386,"Mm.431695","NM_011240","ENSMUSG00000003226","Ranbp2","A430087B05Rik|AI256741|NUP358","RAN binding protein 2","protein-coding"]
[749,"chr12",69168443,69169239,"+",0,"NA","promoter-TSS (NM_001081406)","promoter-TSS (NM_001081406)",27,"NM_001081406",69706,"Mm.28847","NM_027178","ENSMUSG00000034883","Lrr1","2410005L11Rik|AU021780|LRR-1|Ppil5","leucine rich repeat protein 1","protein-coding"]
[268,"chr10",79704164,79705045,"+",0,"NA","intron (NM_001077184, intron 1 of 6)","CpG",246,"NM_009768",12215,"Mm.726","NM_009768","ENSMUSG00000023175","Bsg","AI115436|AI325119|CD147|EMMPRIN|HT-7","basigin","protein-coding"]
[829,"chr12",111442138,111443033,"+",0,"NA","promoter-TSS (NM_009396)","promoter-TSS (NM_009396)",-76,"NM_009396",21928,"Mm.255332","NM_009396","ENSMUSG00000021281","Tnfaip2","B94|Exoc3l3|M-sec|Tnfip2|tnfb94","tumor necrosis factor, alpha-induced protein 2","protein-coding"]
[2872,"chr7",12478059,12478856,"+",0,"NA","5' UTR (NM_026112, exon 1 of 7)","5' UTR (NM_026112, exon 1 of 7)",152,"NM_026112",67370,"Mm.98929","NM_026112","ENSMUSG00000030386","Zfp606","2410022M24Rik|AW494727","zinc finger protein 606","protein-coding"]
[345,"chr10",111972557,111973301,"+",0,"NA","intron (NM_178610, intron 1 of 9)","CpG",234,"NM_178610",52705,"Mm.34606","NM_178610","ENSMUSG00000063334","Krr1","2610511F02Rik|AI255219|AI428520|D10Ertd773e|Hrb2","KRR1, small subunit (SSU) processome component, homolog (yeast)","protein-coding"]
[596,"chr11",97362258,97363741,"+",0,"NA","exon (NM_138657, exon 1 of 10)","exon (NM_138657, exon 1 of 10)",448,"NM_138657",192157,"Mm.34339","NM_138657","ENSMUSG00000038485","Socs7","2310063P06Rik|C85125|Nap4","suppressor of cytokine signaling 7","protein-coding"]
[3323,"chr9",20868415,20869157,"+",0,"NA","5' UTR (NM_175687, exon 1 of 8)","5' UTR (NM_175687, exon 1 of 8)",144,"NM_175687",319278,"Mm.249932","NM_175687","ENSMUSG00000038884","A230050P20Rik","-","RIKEN cDNA A230050P20 gene","protein-coding"]
[1297,"chr16",32246354,32247390,"+",0,"NA","promoter-TSS (NM_026898)","promoter-TSS (NM_026898)",153,"NM_173439",268882,"Mm.256137","NM_173439","ENSMUSG00000035764","Fbxo45","2610017J04Rik|AI463119|BC026799","F-box protein 45","protein-coding"]
[2090,"chr3",30855578,30856498,"+",0,"NA","promoter-TSS (NM_027965)","promoter-TSS (NM_027965)",88,"NM_001286994",71862,"Mm.272019","NM_027965","ENSMUSG00000037661","Gpr160","1700025D19Rik|GPCR150","G protein-coupled receptor 160","protein-coding"]
[1521,"chr17",87672287,87673024,"+",0,"NA","promoter-TSS (NM_008628)","promoter-TSS (NM_008628)",98,"NM_008628",17685,"Mm.4619","NM_008628","ENSMUSG00000024151","Msh2","AI788990","mutS homolog 2 (E. coli)","protein-coding"]
[1862,"chr2",33215597,33217265,"+",0,"NA","5' UTR (NM_011923, exon 1 of 5)","5' UTR (NM_011923, exon 1 of 5)",470,"NM_011923",26360,"Mm.208919","NM_011923","ENSMUSG00000004105","Angptl2","AI593246|AW260363|Arp2","angiopoietin-like 2","protein-coding"]
[2352,"chr4",127021176,127021828,"+",0,"NA","exon (NM_023603, exon 1 of 10)","exon (NM_023603, exon 1 of 10)",201,"NM_023603",71514,"Mm.257276","NM_023603","ENSMUSG00000028820","Sfpq","1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|OTTMUSG00000009329|PSF|REP1","splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)","protein-coding"]
[613,"chr11",100860189,100860992,"+",0,"NA","intron (NM_011488, intron 2 of 19)","CpG",106,"NM_001164062",20850,"Mm.277403","NM_011488","ENSMUSG00000004043","Stat5a","AA959963|STAT5","signal transducer and activator of transcription 5A","protein-coding"]
[3495,"chr9",120303497,120304549,"+",0,"NA","promoter-TSS (NM_144557)","promoter-TSS (NM_144557)",-50,"NM_144557",245049,"Mm.100936","NM_144557","ENSMUSG00000041794","Myrip","A230081N12Rik|Slac2-c|Slac2c","myosin VIIA and Rab interacting protein","protein-coding"]
[1082,"chr15",6708328,6708861,"+",0,"NA","intron (NM_030168, intron 1 of 37)","CpG",213,"NM_030168",78757,"Mm.275811","NM_030168","ENSMUSG00000050310","Rictor","4921505C17Rik|6030405M08Rik|AVO3|AW492497|D530039E11Rik","RPTOR independent companion of MTOR, complex 2","protein-coding"]
[1066,"chr14",99099316,99100145,"+",0,"NA","promoter-TSS (NM_028315)","promoter-TSS (NM_028315)",40,"NM_028315",72662,"Mm.163339","NM_028315","ENSMUSG00000033166","Dis3","2810028N01Rik","DIS3 mitotic control homolog (S. cerevisiae)","protein-coding"]
[121,"chr1",134962118,134962834,"+",0,"NA","promoter-TSS (NM_001278115)","promoter-TSS (NM_001278115)",-89,"NM_026024",67196,"Mm.284587","NM_026024","ENSMUSG00000026429","Ube2t","2700084L22Rik|C80607","ubiquitin-conjugating enzyme E2T (putative)","protein-coding"]
[952,"chr13",110394356,110395719,"+",0,"NA","promoter-TSS (NM_152804)","promoter-TSS (NM_152804)",-7,"NM_152804",20620,"Mm.380","NM_152804","ENSMUSG00000021701","Plk2","Snk","polo-like kinase 2","protein-coding"]
[2691,"chr5",139750610,139752342,"+",0,"NA","3' UTR (NM_026748, exon 47 of 47)","3' UTR (NM_026748, exon 47 of 47)",-15143,"NM_174850",231830,"Mm.240510","NM_174850","ENSMUSG00000036718","Micall2","A930021H16Rik|JRAB|MICAL-L2|mFLJ00139","MICAL-like 2","protein-coding"]
[1071,"chr14",105258525,105259328,"+",0,"NA","exon (NM_029561, exon 1 of 8)","exon (NM_029561, exon 1 of 8)",253,"NM_001190989",76273,"Mm.290669","NM_029561","ENSMUSG00000053253","Ndfip2","0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165","Nedd4 family interacting protein 2","protein-coding"]
[494,"chr11",70432430,70433215,"+",0,"NA","intron (NM_145429, intron 1 of 14)","CpG",242,"NM_001271358",216869,"Mm.203747","NM_145429","ENSMUSG00000060216","Arrb2","AI326910|AW122872","arrestin, beta 2","protein-coding"]
[487,"chr11",69803642,69804549,"+",0,"NA","exon (NM_001033433, exon 2 of 2)","exon (NM_001033433, exon 2 of 2)",426,"NR_027913",74341,"Mm.280165","NR_027913",null,"G630025P09Rik","4632403M07Rik","RIKEN cDNA G630025P09 gene","ncRNA"]
[3058,"chr7",131370922,131371557,"+",0,"NA","promoter-TSS (NM_001039534)","promoter-TSS (NM_001039534)",93,"NM_001039534",214580,"Mm.272948","NM_177609","ENSMUSG00000063179","Pstk","5430423O14Rik|5730458D16Rik|Gm1099|R75284","phosphoseryl-tRNA kinase","protein-coding"]
[3333,"chr9",22156496,22157081,"+",0,"NA","promoter-TSS (NM_001082532)","promoter-TSS (NM_001082532)",-58,"NM_001082532",66268,"Mm.28924","NM_025457","ENSMUSG00000010607","Pigyl","1810008A14Rik|PIG-Y|Pigy","phosphatidylinositol glycan anchor biosynthesis, class Y-like","protein-coding"]
[1956,"chr2",124089753,124090736,"+",0,"NA","5' UTR (NM_001290997, exon 1 of 21)","5' UTR (NM_001290997, exon 1 of 21)",275,"NM_001290997",214968,"Mm.330536","NM_172537","ENSMUSG00000027200","Sema6d","1110067B02Rik|AA409156|D330011G23|mKIAA1479","sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D","protein-coding"]
[2778,"chr6",83053976,83055430,"+",0,"NA","promoter-TSS (NM_019752)","promoter-TSS (NM_019752)",-132,"NM_019752",64704,"Mm.21880","NM_019752","ENSMUSG00000068329","Htra2","AI481710|Omi|Prss25|mnd2","HtrA serine peptidase 2","protein-coding"]
[2235,"chr4",15957878,15958494,"+",0,"NA","intron (NM_013752, intron 1 of 15)","CpG",219,"NM_013752",27354,"Mm.20866","NM_013752","ENSMUSG00000028224","Nbn","Nbs1","nibrin","protein-coding"]
[238,"chr10",61720169,61720964,"+",0,"NA","promoter-TSS (NM_153779)","promoter-TSS (NM_153779)",-83,"NM_153779",71361,"Mm.286309","NM_153779","ENSMUSG00000020085","Aifm2","5430437E11Rik|Amid|D730001I10Rik|PRG3","apoptosis-inducing factor, mitochondrion-associated 2","protein-coding"]
[3175,"chr8",71610906,71611758,"+",0,"NA","exon (NM_146211, exon 1 of 12)","exon (NM_146211, exon 1 of 12)",308,"NM_146211",234407,"Mm.240885","NM_146211","ENSMUSG00000034807","Colgalt1","2810024B22Rik|Glt25d1","collagen beta(1-O)galactosyltransferase 1","protein-coding"]
[873,"chr13",38344964,38346897,"+",0,"NA","5' UTR (NM_007556, exon 1 of 7)","5' UTR (NM_007556, exon 1 of 7)",214,"NM_007556",12161,"Mm.385759","NM_007556","ENSMUSG00000039004","Bmp6","D13Wsu115e|Vgr1","bone morphogenetic protein 6","protein-coding"]
[3081,"chr7",141220835,141222411,"+",0,"NA","promoter-TSS (NR_029793)","promoter-TSS (NR_029793)",-130,"NR_029793",387206,null,"NR_029793","ENSMUSG00000065551","Mir210","Mirn210|mir-210|mmu-mir-210","microRNA 210","ncRNA"]
[253,"chr10",75316960,75317966,"+",0,"NA","intron (NM_009630, intron 1 of 2)","CpG",586,"NM_009630",11540,"Mm.333734","NM_009630","ENSMUSG00000020178","Adora2a","A2AAR|A2aR|AA2AR","adenosine A2a receptor","protein-coding"]
[3099,"chr8",3500094,3501060,"+",0,"NA","promoter-TSS (NM_053177)","promoter-TSS (NM_053177)",58,"NM_053177",94178,"Mm.8356","NM_053177","ENSMUSG00000004567","Mcoln1","2210015I05Rik|TRPML1|mucolipidin","mucolipin 1","protein-coding"]
[448,"chr11",58103775,58104570,"+",0,"NA","promoter-TSS (NM_026949)","promoter-TSS (NM_026949)",19,"NM_026949",69125,"Mm.28910","NM_026949","ENSMUSG00000020515","Cnot8","1500015I04Rik|1810022F04Rik|AA536816|AU015770|AU043059","CCR4-NOT transcription complex, subunit 8","protein-coding"]
[3278,"chr8",120113514,120114987,"+",0,"NA","promoter-TSS (NM_001163762)","promoter-TSS (NM_001163762)",98,"NM_001163761",234797,"Mm.101958","NM_172286","ENSMUSG00000031824","6430548M08Rik","AW049007|Kiaa0513|mKIAA0513","RIKEN cDNA 6430548M08 gene","protein-coding"]
[2631,"chr5",123014614,123015834,"+",0,"NA","5' UTR (NM_175423, exon 1 of 2)","5' UTR (NM_175423, exon 1 of 2)",150,"NM_175423",109305,"Mm.218582","NM_175423","ENSMUSG00000049686","Orai1","D730049H07Rik|Tmem142a|orai-1","ORAI calcium release-activated calcium modulator 1","protein-coding"]
[2278,"chr4",55349519,55350250,"+",0,"NA","promoter-TSS (NM_009011)","promoter-TSS (NM_009011)",-158,"NM_009011",19359,"Mm.196846","NM_009011","ENSMUSG00000028426","Rad23b","0610007D13Rik|AV001138|HR23B|mHR23B|p58","RAD23b homolog (S. cerevisiae)","protein-coding"]
[2427,"chr4",149517964,149518791,"+",0,"NA","5' UTR (NM_023465, exon 1 of 5)","5' UTR (NM_023465, exon 1 of 5)",136,"NM_023465",67087,"Mm.299735","NM_023465","ENSMUSG00000028988","Ctnnbip1","1110008O09Rik|2310001I19Rik|AW457332|Catnbip1|Icat","catenin beta interacting protein 1","protein-coding"]
[63,"chr1",75384210,75385735,"+",0,"NA","promoter-TSS (NM_001085370)","promoter-TSS (NM_001085370)",-638,"NM_001085370",11790,"Mm.275397","NM_007463","ENSMUSG00000026207","Speg","AW125581|Apeg1|BPEG|D1Bwg1450e|SPEGalpha|SPEGbeta|mKIAA1297","SPEG complex locus","protein-coding"]
[1637,"chr19",5023415,5024720,"+",0,"NA","promoter-TSS (NM_007854)","promoter-TSS (NM_007854)",61,"NM_007854",13340,"Mm.4930","NM_007854","ENSMUSG00000024891","Slc29a2","Der12|Ent2|Hnp36","solute carrier family 29 (nucleoside transporters), member 2","protein-coding"]
[3297,"chr8",123212245,123213353,"+",0,"NA","promoter-TSS (NM_177279)","promoter-TSS (NM_177279)",-11,"NM_145606",234852,"Mm.41596","NM_145606","ENSMUSG00000000743","Chmp1a","2900018H07Rik|Pcoln3","charged multivesicular body protein 1A","protein-coding"]
[179,"chr1",192136441,192137223,"+",0,"NA","promoter-TSS (NR_033536)","promoter-TSS (NR_033536)",-66,"NR_033536",100038712,"Mm.474908","NR_033536","ENSMUSG00000097316","Gm10516","ENSMUSG00000073476","predicted gene 10516","ncRNA"]
[1532,"chr18",11656940,11658007,"+",0,"NA","non-coding (NR_045526, exon 1 of 18)","non-coding (NR_045526, exon 1 of 18)",124,"NM_001081223",225182,"Mm.154275","NM_175458","ENSMUSG00000041238","Rbbp8","9930104E21Rik|CtIP|RBBP-8|RIM|SAE2","retinoblastoma binding protein 8","protein-coding"]
[1105,"chr15",41788700,41789619,"+",0,"NA","promoter-TSS (NM_130885)","promoter-TSS (NM_130885)",125,"NM_001130165",170719,"Mm.254267","NM_130885","ENSMUSG00000022307","Oxr1","2210416C20Rik|C7|C7B","oxidation resistance 1","protein-coding"]
[713,"chr11",121701881,121703742,"+",0,"NA","intron (NM_144797, intron 1 of 3)","CpG",384,"NM_144797",210029,"Mm.153566","NM_144797",null,"Metrnl","9430048M07Rik|BC019776","meteorin, glial cell differentiation regulator-like","protein-coding"]
[1334,"chr16",90220360,90220839,"+",0,"NA","promoter-TSS (NM_011434)","promoter-TSS (NM_011434)",-143,"NM_011434",20655,"Mm.276325","NM_011434","ENSMUSG00000022982","Sod1","B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1","superoxide dismutase 1, soluble","protein-coding"]
[2499,"chr5",31240636,31241297,"+",0,"NA","promoter-TSS (NM_147201)","promoter-TSS (NM_147201)",48,"NM_147201",192292,"Mm.292040","NM_147201","ENSMUSG00000029148","Nrbp1","B230344L17Rik|Nrbp","nuclear receptor binding protein 1","protein-coding"]
[2805,"chr6",91156608,91157271,"+",0,"NA","intron (NM_144919, intron 1 of 9)","CpG",124,"NM_144919",232232,"Mm.206218","NM_144919","ENSMUSG00000034245","Hdac11","-","histone deacetylase 11","protein-coding"]
[2096,"chr3",35754104,35754806,"+",0,"NA","intron (NM_029570, intron 1 of 29)","CpG",317,"NM_029570",76295,"Mm.239416","NM_029570","ENSMUSG00000037400","Atp11b","1110019I14Rik|ATPIF|ATPIR|mKIAA0956","ATPase, class VI, type 11B","protein-coding"]
[1784,"chr2",18063911,18064751,"+",0,"NA","promoter-TSS (NM_001252561)","promoter-TSS (NM_001252561)",-254,"NM_001252560",17354,"Mm.209175","NM_010804","ENSMUSG00000026743","Mllt10","Af10|B130021D15Rik|D630001B22Rik|mKIAA4140","myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10","protein-coding"]
[2839,"chr6",120835846,120836742,"+",0,"NA","promoter-TSS (NM_153516)","promoter-TSS (NM_153516)",64,"NM_153516",94044,"Mm.27990","NM_153516","ENSMUSG00000009112","Bcl2l13","BCL-RAMBO|E430016C20Rik|Mil-1|Mil1","BCL2-like 13 (apoptosis facilitator)","protein-coding"]
[938,"chr13",93771606,93772413,"+",0,"NA","exon (NM_009712, exon 1 of 8)","exon (NM_009712, exon 1 of 8)",330,"NM_009712",11881,"Mm.300178","NM_009712","ENSMUSG00000042082","Arsb","1110007C02Rik|AI480648|As-1|As-1r|As-1s|As-1t|As1|As1-r|As1-s|As1-t|Asr-1|Ast-1","arylsulfatase B","protein-coding"]
[2149,"chr3",89714909,89715658,"+",0,"NA","intron (NM_001038587, intron 1 of 14)","CpG",261,"NM_001038587",56417,"Mm.316628","NM_019655","ENSMUSG00000027951","Adar","AV242451|Adar1|Adar1p110|Adar1p150|mZaADAR","adenosine deaminase, RNA-specific","protein-coding"]
[1679,"chr19",8774194,8775039,"+",0,"NA","promoter-TSS (NM_026325)","promoter-TSS (NM_026325)",131,"NR_015538",100039957,"Mm.220886","NR_015538",null,"Gm2518","D630022E15Rik","interferon induced transmembrane protein 2 pseudogene","pseudo"]
[1830,"chr2",29935196,29935694,"+",0,"NA","promoter-TSS (NM_028923)","promoter-TSS (NM_028923)",36,"NM_028923",74412,"Mm.275121","NM_028923",null,"Gle1","4933405K21Rik|AA553313|Gle1l","GLE1 RNA export mediator (yeast)","protein-coding"]
[1620,"chr18",90510058,90510648,"+",0,"NA","exon (NM_198295, exon 1 of 16)","exon (NM_198295, exon 1 of 16)",199,"NM_198295",67988,"Mm.268041","NM_198295","ENSMUSG00000024614","Tmx3","6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830","thioredoxin-related transmembrane protein 3","protein-coding"]
[2241,"chr4",28812767,28813208,"+",0,"NA","promoter-TSS (NM_001122889)","promoter-TSS (NM_001122889)",-144,"NM_001290434",13841,"Mm.257266","NM_010141","ENSMUSG00000028289","Epha7","Cek11|Ebk|Ehk3|Hek11|Mdk1","Eph receptor A7","protein-coding"]
[3060,"chr7",132315459,132317228,"+",0,"NA","non-coding (NR_028578, exon 1 of 1)","non-coding (NR_028578, exon 1 of 1)",679,"NR_028578",100043682,"Mm.482794","NR_028578",null,"Gm10584","ENSMUSG00000073814","predicted gene 10584","ncRNA"]
[1262,"chr16",17124096,17124807,"+",0,"NA","promoter-TSS (NR_029659)","promoter-TSS (NR_029659)",45,"NR_030415",791069,null,"NR_030415","ENSMUSG00000076288","Mir301b","Mirn301b|mir-301b","microRNA 301b","ncRNA"]
[3167,"chr8",70594278,70595040,"+",0,"NA","exon (NM_023627, exon 2 of 11)","exon (NM_023627, exon 2 of 11)",178,"NM_023627",71780,"Mm.29357","NM_023627","ENSMUSG00000019139","Isyna1","1300017C10Rik|AU018670","myo-inositol 1-phosphate synthase A1","protein-coding"]
[1290,"chr16",23107180,23107988,"+",0,"NA","non-coding (NR_110335, exon 1 of 12)","non-coding (NR_110335, exon 1 of 12)",116,"NR_110335",13682,"Mm.260084","NM_013506","ENSMUSG00000022884","Eif4a2","4833432N07Rik|BM-010|Ddx2b|Eif4|eIF-4A-II|eIF4A-II","eukaryotic translation initiation factor 4A2","protein-coding"]
[1527,"chr18",9212245,9214476,"+",0,"NA","exon (NM_008058, exon 1 of 1)","exon (NM_008058, exon 1 of 1)",504,"NM_008058",14370,"Mm.184289","NM_008058","ENSMUSG00000036904","Fzd8","Fz8","frizzled homolog 8 (Drosophila)","protein-coding"]
[2162,"chr3",96727235,96728148,"+",0,"NA","promoter-TSS (NM_028925)","promoter-TSS (NM_028925)",80,"NM_026406",67845,"Mm.386792","NM_026406","ENSMUSG00000028098","Rnf115","2610028E05Rik|AU042696|Zfp364","ring finger protein 115","protein-coding"]
[1132,"chr15",76063953,76065211,"+",0,"NA","TTS (NR_105917)","TTS (NR_105917)",306,"NR_105917",102466772,null,"NR_105917","ENSMUSG00000098451","Mir6952","Gm27948|mmu-mir-6952","microRNA 6952","ncRNA"]
[2370,"chr4",131921555,131923249,"+",0,"NA","exon (NM_001201367, exon 1 of 1)","exon (NM_001201367, exon 1 of 1)",631,"NM_001201367",623230,"Mm.421179","NM_001201367","ENSMUSG00000070720","Tmem200b","EG623230","transmembrane protein 200B","protein-coding"]
[929,"chr13",74639656,74640304,"+",0,"NA","intron (NM_030711, intron 1 of 18)","CpG",108,"NM_030711",80898,"Mm.83526","NM_030711","ENSMUSG00000021583","Erap1","Arts1|ERAAP|PILSA|PILSAP","endoplasmic reticulum aminopeptidase 1","protein-coding"]
[2554,"chr5",88720625,88721405,"+",0,"NA","5' UTR (NM_026735, exon 1 of 6)","5' UTR (NM_026735, exon 1 of 6)",144,"NM_026735",68473,"Mm.35764","NM_026735","ENSMUSG00000006262","Mob1b","1110003E08Rik|AU015450|B230364F10|Mobkl1a","MOB kinase activator 1B","protein-coding"]
[1925,"chr2",92383448,92384110,"+",0,"NA","TTS (NM_183112)","TTS (NM_183112)",861,"NM_183112",75641,"Mm.330409","NM_183112","ENSMUSG00000044916","1700029I15Rik","1700021K07Rik","RIKEN cDNA 1700029I15 gene","protein-coding"]
[2916,"chr7",39517432,39518124,"+",0,"NA","promoter-TSS (NM_001004139)","promoter-TSS (NM_001004139)",12,"NM_001004139",70227,"Mm.333800","NM_001004139","ENSMUSG00000068959","Zfp619","3000002G13Rik","zinc finger protein 619","protein-coding"]
[2574,"chr5",105518993,105520019,"+",0,"NA","promoter-TSS (NM_133897)","promoter-TSS (NM_133897)",35,"NM_133897",100604,"Mm.319847","NM_133897","ENSMUSG00000054720","Lrrc8c","AD158|AI326115|E430036I04Rik|fad158","leucine rich repeat containing 8 family, member C","protein-coding"]
[3126,"chr8",22192668,22193361,"+",0,"NA","intron (NM_027338, intron 1 of 13)","CpG",154,"NM_027338",70160,"Mm.41453","NM_027338",null,"Vps36","1700010A24Rik|2210415M20Rik|2810408E15Rik|Eap45","vacuolar protein sorting 36 (yeast)","protein-coding"]
[547,"chr11",79591037,79591660,"+",0,"NA","exon (NM_175543, exon 1 of 15)","exon (NM_175543, exon 1 of 15)",136,"NM_175543",268451,"Mm.130656","NM_175543","ENSMUSG00000017639","Rab11fip4","A730072L08Rik|RAB11-FIP4|mKIAA1821","RAB11 family interacting protein 4 (class II)","protein-coding"]
[631,"chr11",103198847,103199432,"+",0,"NA","TTS (NM_001077698)","TTS (NM_001077698)",9409,"NM_001254724",69441,"Mm.380648","NM_027082","ENSMUSG00000020940","1700023F06Rik","-","RIKEN cDNA 1700023F06 gene","protein-coding"]
[1616,"chr18",77938080,77938760,"+",0,"NA","promoter-TSS (NM_001195633)","promoter-TSS (NM_001195633)",-47,"NM_001195633",100502841,"Mm.297782","NM_001195633","ENSMUSG00000039840","Epg5","4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632","ectopic P-granules autophagy protein 5 homolog (C. elegans)","protein-coding"]
[1583,"chr18",60560580,60561250,"+",0,"NA","intron (NM_025776, intron 1 of 10)","CpG",129,"NM_025776",66810,"Mm.275106","NM_025776","ENSMUSG00000024604","Rbm22","8430430L24Rik","RNA binding motif protein 22","protein-coding"]
[1544,"chr18",25168491,25169458,"+",0,"NA","promoter-TSS (NM_001004361)","promoter-TSS (NM_001004361)",-46,"NM_001033532",225289,"Mm.391081","NM_001033532","ENSMUSG00000033632","AW554918","4921538P22|AI461742|Kiaa1328|mKIAA1328","expressed sequence AW554918","protein-coding"]
[1538,"chr18",20557782,20558638,"+",0,"NA","promoter-TSS (NM_007883)","promoter-TSS (NM_007883)",94,"NM_007883",13511,"Mm.345891","NM_007883","ENSMUSG00000044393","Dsg2","AA408168|D18Ertd293e","desmoglein 2","protein-coding"]
[396,"chr11",21238403,21239690,"+",0,"NA","promoter-TSS (NM_139061)","promoter-TSS (NM_139061)",14,"NM_001290628",245944,"Mm.170103","NM_139061","ENSMUSG00000020128","Vps54","Hcc8|Vps54l|mSLP8|wr","vacuolar protein sorting 54 (yeast)","protein-coding"]
[258,"chr10",77032812,77033598,"+",0,"NA","promoter-TSS (NM_031196)","promoter-TSS (NM_031196)",-7,"NM_031196",20509,"Mm.265060","NM_031196","ENSMUSG00000001436","Slc19a1","AI323572|RFC|RFC-1|RFC1","solute carrier family 19 (folate transporter), member 1","protein-coding"]
[1422,"chr17",28905116,28905777,"+",0,"NA","exon (NM_172450, exon 5 of 12)","exon (NM_172450, exon 5 of 12)",181,"NR_045457",74179,"Mm.248931","NR_045457","ENSMUSG00000085333","1700030A11Rik","-","RIKEN cDNA 1700030A11 gene","ncRNA"]
[482,"chr11",69070478,69071534,"+",0,"NA","exon (NM_028336, exon 1 of 4)","exon (NM_028336, exon 1 of 4)",197,"NM_028336",66910,"Mm.33964","NM_025838","ENSMUSG00000020895","Tmem107","1110004B13Rik|2810049P21Rik","transmembrane protein 107","protein-coding"]
[2620,"chr5",120649180,120649862,"+",0,"NA","exon (NM_013832, exon 2 of 22)","exon (NM_013832, exon 2 of 22)",333,"NM_001281999",19415,"Mm.41209","NM_013832","ENSMUSG00000029602","Rasal1","MRASAL","RAS protein activator like 1 (GAP1 like)","protein-coding"]
[949,"chr13",108158089,108159038,"+",0,"NA","promoter-TSS (NM_028042)","promoter-TSS (NM_028042)",62,"NM_001127346",75597,"Mm.276040","NM_001127346","ENSMUSG00000068184","Ndufaf2","1810058I14Rik|C86051|Ndufa12l|mimitin","NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2","protein-coding"]
[3432,"chr9",90054151,90054997,"+",0,"NA","exon (NM_007801, exon 1 of 12)","exon (NM_007801, exon 1 of 12)",307,"NM_001312649",13036,"Mm.2277","NM_007801","ENSMUSG00000032359","Ctsh","AL022844","cathepsin H","protein-coding"]
[499,"chr11",70764036,70764837,"+",0,"NA","promoter-TSS (NM_177565)","promoter-TSS (NM_177565)",-11,"NM_177565",193043,"Mm.40966","NM_177565","ENSMUSG00000043602","Zfp3","AI854635|B230309J24|Fnp-1|Zfp-3","zinc finger protein 3","protein-coding"]
[1047,"chr14",68123534,68123976,"+",0,"NA","promoter-TSS (NR_045897)","promoter-TSS (NR_045897)",3,"NR_045897",100043072,"Mm.242832","NR_045897",null,"A230070E04Rik","Gm4210","RIKEN cDNA A230070E04 gene","ncRNA"]
[2138,"chr3",88335991,88336548,"+",0,"NA","promoter-TSS (NM_178246)","promoter-TSS (NM_178246)",9,"NM_178246",229512,"Mm.439830","NM_173188","ENSMUSG00000001415","Smg5","BC024683|mKIAA1089","Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)","protein-coding"]
[1055,"chr14",75015931,75016877,"+",0,"NA","intron (NM_198642, intron 1 of 13)","CpG",377,"NM_198642",271221,"Mm.320280","NM_198642","ENSMUSG00000034959","5031414D18Rik","Gm744|Gm911|Kiaa0226l","RIKEN cDNA 5031414D18 gene","protein-coding"]
[2447,"chr4",154960738,154962054,"+",0,"NA","exon (NM_010419, exon 3 of 3)","exon (NM_010419, exon 3 of 3)",473,"NM_010419",15208,"Mm.137268","NM_010419","ENSMUSG00000048001","Hes5","bHLHb38","hairy and enhancer of split 5 (Drosophila)","protein-coding"]
[1276,"chr16",18426058,18426847,"+",0,"NA","promoter-TSS (NM_013711)","promoter-TSS (NM_013711)",35,"NM_013711",26462,"Mm.390906","NM_013711","ENSMUSG00000075704","Txnrd2","AA118373|ESTM573010|TGR|Tr3|Trxr2|Trxrd2","thioredoxin reductase 2","protein-coding"]
[3228,"chr8",95533941,95534482,"+",0,"NA","exon (NM_172914, exon 1 of 9)","exon (NM_172914, exon 1 of 9)",111,"NM_172914",244608,"Mm.248902","NM_172914","ENSMUSG00000036598","Ccdc113","4933409I22|BC060957","coiled-coil domain containing 113","protein-coding"]
[3140,"chr8",40423541,40424210,"+",0,"NA","promoter-TSS (NM_178395)","promoter-TSS (NM_178395)",60,"NM_178395",70546,"Mm.34326","NM_178395",null,"Zdhhc2","5730415P04Rik|6430583A19Rik","zinc finger, DHHC domain containing 2","protein-coding"]
[141,"chr1",157411644,157412816,"+",0,"NA","promoter-TSS (NR_027984)","promoter-TSS (NR_027984)",-122,"NR_027984",69953,"Mm.286863","NM_027274","ENSMUSG00000049881","2810025M15Rik","AI429618","RIKEN cDNA 2810025M15 gene","ncRNA"]
[909,"chr13",55727033,55727732,"+",0,"NA","promoter-TSS (NM_028281)","promoter-TSS (NM_028281)",14,"NM_028281",72562,"Mm.28145","NM_028281","ENSMUSG00000021496","Pcbd2","2700061N24Rik|Dcoh2|Dcohm","pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2","protein-coding"]
[3043,"chr7",127244072,127244897,"+",0,"NA","promoter-TSS (NM_177362)","promoter-TSS (NM_177362)",-42,"NM_177362",244216,"Mm.41038","NM_177362","ENSMUSG00000054716","Zfp771","G630024C07Rik|Znf771","zinc finger protein 771","protein-coding"]
[2981,"chr7",89404259,89405095,"+",0,"NA","5' UTR (NM_008055, exon 1 of 2)","5' UTR (NM_008055, exon 1 of 2)",311,"NM_008055",14366,"Mm.86755","NM_008055","ENSMUSG00000049791","Fzd4","Fz4","frizzled homolog 4 (Drosophila)","protein-coding"]
[2618,"chr5",120116262,120117085,"+",0,"NA","intron (NM_028762, intron 1 of 23)","CpG",160,"NM_028762",74111,"Mm.41022","NM_028762","ENSMUSG00000029594","Rbm19","1200009A02Rik|AV302714|NPO","RNA binding motif protein 19","protein-coding"]
[1124,"chr15",74708958,74709645,"+",0,"NA","promoter-TSS (NM_008415)","promoter-TSS (NM_008415)",21,"NM_008415",16469,"Mm.87052","NM_008415","ENSMUSG00000046380","Jrk","-","jerky","protein-coding"]
[1230,"chr15",102331439,102332061,"+",0,"NA","promoter-TSS (NM_021713)","promoter-TSS (NM_021713)",41,"NM_021713",60315,"Mm.251638","NM_021713","ENSMUSG00000001285","Myg1","0610023A07Rik|2810433J21Rik|5830429P19Rik|AI325965|Gamm1","melanocyte proliferating gene 1","protein-coding"]
[75,"chr1",87264331,87265087,"+",0,"NA","exon (NM_028889, exon 1 of 4)","exon (NM_028889, exon 1 of 4)",345,"NM_028889",98363,"Mm.247951","NM_028889","ENSMUSG00000026255","Efhd1","4931430I01Rik|AI452351|PP3051|mitocalcin","EF hand domain containing 1","protein-coding"]
[2793,"chr6",87042289,87043357,"+",0,"NA","promoter-TSS (NM_013528)","promoter-TSS (NM_013528)",-23,"NM_013528",14583,"Mm.19893","NM_013528","ENSMUSG00000029992","Gfpt1","2810423A18Rik|AI324119|AI449986|GFA|GFAT|GFAT1|GFAT1m|Gfpt","glutamine fructose-6-phosphate transaminase 1","protein-coding"]
[2993,"chr7",99380961,99381895,"+",0,"NA","promoter-TSS (NM_201352)","promoter-TSS (NM_201352)",-121,"NM_201352",233552,"Mm.286317","NM_201352","ENSMUSG00000035314","Gdpd5","BC024955|Gde2","glycerophosphodiester phosphodiesterase domain containing 5","protein-coding"]
[2588,"chr5",110839287,110840221,"+",0,"NA","promoter-TSS (NM_153571)","promoter-TSS (NM_153571)",23,"NM_153571",100900,"Mm.200231","NM_153571","ENSMUSG00000043510","Hscb","AI325508|AW049829|Hsc20","HscB iron-sulfur cluster co-chaperone homolog (E. coli)","protein-coding"]
[1917,"chr2",90885422,90886100,"+",0,"NA","promoter-TSS (NM_026161)","promoter-TSS (NM_026161)",-25,"NM_026161",67445,"Mm.258993","NM_026161","ENSMUSG00000040794","C1qtnf4","0710001E10Rik|9430004J15Rik|CTRP4","C1q and tumor necrosis factor related protein 4","protein-coding"]
[1163,"chr15",79347285,79348519,"+",0,"NA","promoter-TSS (NM_001304832)","promoter-TSS (NM_001304832)",-159,"NM_001304831",17133,"Mm.86646","NM_010755","ENSMUSG00000042622","Maff","-","v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)","protein-coding"]
[450,"chr11",58977717,58978748,"+",0,"NA","5' UTR (NM_053168, exon 1 of 6)","5' UTR (NM_053168, exon 1 of 6)",139,"NM_053168",94091,"Mm.248049","NM_053168","ENSMUSG00000020455","Trim11","-","tripartite motif-containing 11","protein-coding"]
[1702,"chr19",21653281,21653890,"+",0,"NA","promoter-TSS (NM_025423)","promoter-TSS (NM_025423)",276,"NM_146096",226016,"Mm.28796","NM_146096","ENSMUSG00000047368","Abhd17b","5730446C15Rik|Cgi67|Fam108b|Fam108b1","abhydrolase domain containing 17B","protein-coding"]
[3118,"chr8",13338646,13339289,"+",0,"NA","intron (NM_009361, intron 1 of 11)","CpG",163,"NM_009361",21781,"Mm.925","NM_009361",null,"Tfdp1","Dp1|Drtf1","transcription factor Dp 1","protein-coding"]
[1405,"chr17",26414465,26415828,"+",0,"NA","intron (NM_001081656, intron 1 of 4)","CpG",181,"NM_001081656",240055,"Mm.133211","NM_001081656","ENSMUSG00000034413","Neurl1b","C230078M08Rik|EG240055","neuralized E3 ubiquitin protein ligase 1B","protein-coding"]
[1713,"chr19",28963766,28964837,"+",0,"NA","promoter-TSS (NM_198651)","promoter-TSS (NM_198651)",-147,"NM_198651",381218,"Mm.280653","NM_198651","ENSMUSG00000064202","4430402I18Rik","AW122618|Spata6l","RIKEN cDNA 4430402I18 gene","protein-coding"]
[1060,"chr14",76487749,76488446,"+",0,"NA","promoter-TSS (NM_001177751)","promoter-TSS (NM_001177751)",-339,"NM_001177751",21807,"Mm.153272","NM_009366","ENSMUSG00000022010","Tsc22d1","AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22","TSC22 domain family, member 1","protein-coding"]
[2420,"chr4",148038427,148039482,"+",0,"NA","promoter-TSS (NM_011929)","promoter-TSS (NM_011929)",-123,"NM_010840",17769,"Mm.89959","NM_010840","ENSMUSG00000029009","Mthfr","AI323986","5,10-methylenetetrahydrofolate reductase","protein-coding"]
[2104,"chr3",41742139,41742619,"+",0,"NA","promoter-TSS (NM_027271)","promoter-TSS (NM_027271)",135,"NM_001081411",67161,"Mm.331001","NM_026008","ENSMUSG00000059834","Sclt1","2610207F23Rik|4931421F20Rik","sodium channel and clathrin linker 1","protein-coding"]
[2894,"chr7",25367418,25368223,"+",0,"NA","exon (NM_001081375, exon 4 of 4)","exon (NM_001081375, exon 4 of 4)",1904,"NM_001081375",72383,"Mm.34382","NM_028219","ENSMUSG00000063651","Cnfn","2210418J09Rik","cornifelin","protein-coding"]
[2126,"chr3",68869212,68870699,"+",0,"NA","exon (NM_001167996, exon 1 of 1)","exon (NM_001167996, exon 1 of 1)",369,"NM_001167996",68725,"Mm.45741","NM_001167996","ENSMUSG00000046999","1110032F04Rik","AI115547","RIKEN cDNA 1110032F04 gene","protein-coding"]
[2858,"chr6",143166773,143167902,"+",0,"NA","5' UTR (NM_029250, exon 1 of 8)","5' UTR (NM_029250, exon 1 of 8)",107,"NM_029250",75320,"Mm.272548","NM_029250","ENSMUSG00000030275","Etnk1","1110061E11Rik|4930555L11Rik|AI195356|AI841245|C80956|D6Ertd3e|EKI1","ethanolamine kinase 1","protein-coding"]
[900,"chr13",54949368,54950055,"+",0,"NA","exon (NM_153131, exon 1 of 16)","exon (NM_153131, exon 1 of 16)",279,"NM_153131",107448,"Mm.23573","NM_153131","ENSMUSG00000025876","Unc5a","Unc5h1|mKIAA1976","unc-5 homolog A (C. elegans)","protein-coding"]
[318,"chr10",86300164,86300999,"+",0,"NA","5' UTR (NM_011595, exon 1 of 5)","5' UTR (NM_011595, exon 1 of 5)",169,"NM_011595",21859,"Mm.4871","NM_011595","ENSMUSG00000020044","Timp3","Timp-3","tissue inhibitor of metalloproteinase 3","protein-coding"]
[1729,"chr19",41932837,41933799,"+",0,"NA","promoter-TSS (NM_025644)","promoter-TSS (NM_025644)",-4,"NM_025644",66583,"Mm.289086","NM_025644","ENSMUSG00000034321","Exosc1","2610035C18Rik|2610104C07Rik|2610312F07Rik|AI447561","exosome component 1","protein-coding"]
[2526,"chr5",45493108,45493848,"+",0,"NA","exon (NM_024434, exon 1 of 13)","exon (NM_024434, exon 1 of 13)",104,"NM_024434",66988,"Mm.286830","NM_024434","ENSMUSG00000039682","Lap3","2410015L10Rik|AA410100|LAP-3|Lap|Lapep|Pep-7|Pep-S|Pep7|Peps","leucine aminopeptidase 3","protein-coding"]
[972,"chr14",17660049,17660997,"+",0,"NA","promoter-TSS (NM_001113417)","promoter-TSS (NM_001113417)",-437,"NM_001113417",21834,"Mm.32563","NM_009380","ENSMUSG00000021779","Thrb","Nr1a2|T3R[b]|T3Rbeta|Thrb1|Thrb2|c-erbAbeta","thyroid hormone receptor beta","protein-coding"]
[473,"chr11",64435167,64436672,"+",0,"NA","non-coding (NR_028445, exon 1 of 1)","non-coding (NR_028445, exon 1 of 1)",587,"NM_178870",15478,"Mm.340214","NM_178870","ENSMUSG00000047759","Hs3st3a1","3Ost3a|Hs3st3a","heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1","protein-coding"]
[2572,"chr5",104508290,104508920,"+",0,"NA","intron (NM_001166581, intron 1 of 1)","CpG",253,"NM_001166581",100042165,"Mm.482189","NM_001166581","ENSMUSG00000079065","BC005561","-","cDNA sequence BC005561","protein-coding"]
[1774,"chr2",4918785,4919675,"+",0,"NA","intron (NM_010726, intron 1 of 8)","intron (NM_010726, intron 1 of 8)",234,"NM_010726",16922,"Mm.391704","NM_010726","ENSMUSG00000026664","Phyh","AI256161|AI265699|Lnap1|PAHX","phytanoyl-CoA hydroxylase","protein-coding"]
[3,"chr1",6358854,6359544,"+",0,"NA","promoter-TSS (NM_001195732)","promoter-TSS (NM_001195732)",-132,"NM_001195732",620393,"Mm.388992","NM_001195732","ENSMUSG00000087247","Fam150a","EG620393","family with sequence similarity 150, member A","protein-coding"]
[248,"chr10",70245204,70245936,"+",0,"NA","intron (NM_025807, intron 1 of 5)","intron (NM_025807, intron 1 of 5)",294,"NM_025807",66859,"Mm.19325","NM_025807","ENSMUSG00000037762","Slc16a9","1200003C15Rik|4930425B13Rik|AI552636","solute carrier family 16 (monocarboxylic acid transporters), member 9","protein-coding"]
[146,"chr1",164151503,164152161,"+",0,"NA","promoter-TSS (NM_007976)","promoter-TSS (NM_007976)",-3,"NM_007976",14067,"Mm.12900","NM_007976","ENSMUSG00000026579","F5","AI173222|Cf-5|Cf5","coagulation factor V","protein-coding"]
[3202,"chr8",85059950,85060592,"+",0,"NA","exon (NM_026791, exon 1 of 10)","exon (NM_026791, exon 1 of 10)",152,"NM_026791",68628,"Mm.374815","NM_026791","ENSMUSG00000008167","Fbxw9","1110017H11Rik|Fbw9","F-box and WD-40 domain protein 9","protein-coding"]
[1351,"chr17",5491842,5493262,"+",0,"NA","promoter-TSS (NM_146073)","promoter-TSS (NM_146073)",-48,"NM_146073",224454,"Mm.487663","NM_146073","ENSMUSG00000034265","Zdhhc14","B530001K09Rik|New1cp","zinc finger, DHHC domain containing 14","protein-coding"]
[2396,"chr4",137992829,137993753,"+",0,"NA","promoter-TSS (NM_001256195)","promoter-TSS (NM_001256195)",-165,"NM_001256198",230861,"Mm.268903","NM_172703","ENSMUSG00000028760","Eif4g3","1500002J22Rik|4833436O05|4930523M17Rik|G1-419-52|eIF4GII|repro8","eukaryotic translation initiation factor 4 gamma, 3","protein-coding"]
[356,"chr10",125965854,125966386,"+",0,"NA","promoter-TSS (NM_177152)","promoter-TSS (NM_177152)",-99,"NM_177152",320398,"Mm.275586","NM_177152","ENSMUSG00000020105","Lrig3","9030421L11Rik|9130004I02Rik|9430095K15Rik|mKIAA3016","leucine-rich repeats and immunoglobulin-like domains 3","protein-coding"]
[802,"chr12",101082431,101084032,"+",0,"NA","non-coding (NR_038050, exon 1 of 2)","non-coding (NR_038050, exon 1 of 2)",471,"NM_211355",68734,"Mm.87077","NM_211355","ENSMUSG00000041846","Smek1","1110034C04Rik|BC064465|mKIAA2010","SMEK homolog 1, suppressor of mek1 (Dictyostelium)","protein-coding"]
[2720,"chr5",149411376,149412376,"+",0,"NA","promoter-TSS (NM_027519)","promoter-TSS (NM_027519)",70,"NM_027519",70717,"Mm.252139","NM_027519","ENSMUSG00000029659","Medag","6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3","mesenteric estrogen dependent adipogenesis","protein-coding"]
[3420,"chr9",75625298,75626168,"+",0,"NA","promoter-TSS (NM_027309)","promoter-TSS (NM_027309)",1,"NM_027309",70082,"Mm.19119","NM_027309","ENSMUSG00000032184","Lysmd2","2210402C18Rik|AV033872|AW538442","LysM, putative peptidoglycan-binding, domain containing 2","protein-coding"]
[2063,"chr2",173659784,173660353,"+",0,"NA","promoter-TSS (NR_027957)","promoter-TSS (NR_027957)",223,"NM_024436",19334,"Mm.275304","NM_024436",null,"Rab22a","3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22","RAB22A, member RAS oncogene family","protein-coding"]
[528,"chr11",76679772,76680523,"+",0,"NA","5' UTR (NM_177709, exon 1 of 3)","5' UTR (NM_177709, exon 1 of 3)",274,"NM_177709",237858,"Mm.127006","NM_177709","ENSMUSG00000046275","Tusc5","C130069F04Rik|DSPB1|Lost1","tumor suppressor candidate 5","protein-coding"]
[164,"chr1",180850494,180851376,"+",0,"NA","promoter-TSS (NM_145943)","promoter-TSS (NM_145943)",-216,"NM_145943",208768,"Mm.272625","NM_145943","ENSMUSG00000038806","Sde2","-","SDE2 telomere maintenance homolog (S. pombe)","protein-coding"]
[807,"chr12",102948535,102949212,"+",0,"NA","promoter-TSS (NM_001081017)","promoter-TSS (NM_001081017)",14,"NM_001081017",217843,"Mm.387073","NM_177621","ENSMUSG00000021198","Unc79","9030205A07Rik|Mlca3","unc-79 homolog (C. elegans)","protein-coding"]
[3269,"chr8",117498062,117498692,"+",0,"NA","promoter-TSS (NM_172285)","promoter-TSS (NM_172285)",86,"NM_172285",234779,"Mm.192699","NM_172285","ENSMUSG00000034330","Plcg2","PLCgamma2|Plcg-2","phospholipase C, gamma 2","protein-coding"]
[2040,"chr2",164562382,164563294,"+",0,"NA","intron (NM_026323, intron 1 of 4)","intron (NM_026323, intron 1 of 4)",122,"NM_026323",67701,"Mm.27289","NM_026323","ENSMUSG00000017723","Wfdc2","1600023A02Rik|HE4|WAP5","WAP four-disulfide core domain 2","protein-coding"]
[2678,"chr5",137745580,137746343,"+",0,"NA","promoter-TSS (NM_029805)","promoter-TSS (NM_029805)",-8,"NM_023910",78829,"Mm.286399","NM_023910","ENSMUSG00000029723","Tsc22d4","0610009M14Rik|1700023B23Rik|AI415410|Thg-1pit|Tilz2","TSC22 domain family, member 4","protein-coding"]
[2632,"chr5",123142070,123142763,"+",0,"NA","5' UTR (NM_001040398, exon 1 of 17)","5' UTR (NM_001040398, exon 1 of 17)",223,"NM_001040398",208043,"Mm.250391","NM_177581","ENSMUSG00000038384","Setd1b","AA516740|BC035291|KMT2G|mKIAA1076","SET domain containing 1B","protein-coding"]
[1049,"chr14",70457209,70458189,"+",0,"NA","5' UTR (NM_145981, exon 1 of 5)","5' UTR (NM_145981, exon 1 of 5)",182,"NM_145981",105653,"Mm.192598","NM_145981","ENSMUSG00000003469","Phyhip","AW049870|C630010D02Rik|Lnap1ip|PAHX-AP#1|PAHX-AP1","phytanoyl-CoA hydroxylase interacting protein","protein-coding"]
[2898,"chr7",28070574,28071371,"+",0,"NA","promoter-TSS (NM_001122603)","promoter-TSS (NM_001122603)",-264,"NM_001122603",215384,"Mm.292276","NM_175444","ENSMUSG00000047730","Fcgbp","A430096B05Rik","Fc fragment of IgG binding protein","protein-coding"]
[882,"chr13",46418000,46418582,"+",0,"NA","promoter-TSS (NM_001081425)","promoter-TSS (NM_001081425)",-9,"NM_001081425",666794,"Mm.38269","NM_001081425","ENSMUSG00000038132","Rbm24","6330546B05Rik|AI606861","RNA binding motif protein 24","protein-coding"]
[2812,"chr6",99692577,99693903,"+",0,"NA","exon (NM_008158, exon 1 of 1)","exon (NM_008158, exon 1 of 1)",561,"NM_008158",14761,"Mm.35009","NM_008158",null,"Gpr27","-","G protein-coupled receptor 27","protein-coding"]
[1050,"chr14",70577617,70578385,"+",0,"NA","exon (NM_153136, exon 1 of 3)","exon (NM_153136, exon 1 of 3)",154,"NM_153136",213484,"Mm.34191","NM_153136","ENSMUSG00000045211","Nudt18","BC036718","nudix (nucleoside diphosphate linked moiety X)-type motif 18","protein-coding"]
[1488,"chr17",56325734,56326469,"+",0,"NA","promoter-TSS (NM_172132)","promoter-TSS (NM_172132)",51,"NM_172132",193796,"Mm.45047","NM_172132","ENSMUSG00000024201","Kdm4b","4732474L06Rik|Jmjd2b|mKIAA0876","lysine (K)-specific demethylase 4B","protein-coding"]
[560,"chr11",84828580,84829369,"+",0,"NA","promoter-TSS (NR_046281)","promoter-TSS (NR_046281)",29,"NM_177564",192970,"Mm.192213","NM_177564","ENSMUSG00000034449","Dhrs11","-","dehydrogenase/reductase (SDR family) member 11","protein-coding"]
[2830,"chr6",115361027,115361811,"+",0,"NA","promoter-TSS (NM_001308354)","promoter-TSS (NM_001308354)",275,"NM_001308352",19016,"Mm.3020","NM_011146","ENSMUSG00000000440","Pparg","Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2","peroxisome proliferator activated receptor gamma","protein-coding"]
[798,"chr12",99884367,99884965,"+",0,"NA","intron (NM_028354, intron 1 of 15)","CpG",151,"NM_028354",104884,"Mm.312323","NM_028354","ENSMUSG00000021177","Tdp1","2810481F14Rik|4921509N21Rik|AI838772|AW493413|E430034L06Rik|MLZ-501|SCAN1","tyrosyl-DNA phosphodiesterase 1","protein-coding"]
[898,"chr13",54503743,54504605,"+",0,"NA","intron (NM_176987, intron 1 of 9)","CpG",369,"NM_176987",319719,"Mm.376151","NM_176987","ENSMUSG00000043183","Simc1","4732471D19Rik","SUMO-interacting motifs containing 1","protein-coding"]
[2725,"chr6",5725564,5726424,"+",0,"NA","intron (NM_010063, intron 1 of 16)","intron (NM_010063, intron 1 of 16)",355,"NM_001191026",13426,"Mm.20893","NM_010063","ENSMUSG00000029757","Dync1i1","DH IC-1|DHIC-1|DIC|Dncic1|IC74","dynein cytoplasmic 1 intermediate chain 1","protein-coding"]
[1031,"chr14",55853942,55854654,"+",0,"NA","exon (NM_001040072, exon 1 of 8)","exon (NM_001040072, exon 1 of 8)",183,"NM_001040072",277154,"Mm.319347","NM_001040072","ENSMUSG00000075592","Nynrin","AA409373|C80530|mKIAA1305","NYN domain and retroviral integrase containing","protein-coding"]
[1273,"chr16",18127513,18128618,"+",0,"NA","intron (NM_022982, intron 1 of 1)","CpG",359,"NM_022982",65079,"Mm.40149","NM_022982","ENSMUSG00000043811","Rtn4r","NOGOR|NgR|NgR1","reticulon 4 receptor","protein-coding"]
[2942,"chr7",49758989,49759661,"+",0,"NA","promoter-TSS (NM_001146052)","promoter-TSS (NM_001146052)",-187,"NM_001146052",53415,"Mm.20801","NM_016865","ENSMUSG00000039745","Htatip2","AW111545|Cc3|Tip30","HIV-1 tat interactive protein 2, homolog (human)","protein-coding"]
[3401,"chr9",65101041,65102572,"+",0,"NA","intron (NM_020043, intron 1 of 19)","CpG",320,"NM_020043",56741,"Mm.209041","NM_020043","ENSMUSG00000032816","Igdcc4","DDM36|Nope","immunoglobulin superfamily, DCC subclass, member 4","protein-coding"]
[2516,"chr5",35757573,35758811,"+",0,"NA","intron (NM_001177696, intron 1 of 21)","CpG",312,"NM_001177698",231148,"Mm.254446","NM_177678","ENSMUSG00000029095","Ablim2","AI606905|C230091L11","actin-binding LIM protein 2","protein-coding"]
[451,"chr11",59201816,59202922,"+",0,"NA","promoter-TSS (NM_001302335)","promoter-TSS (NM_001302335)",62,"NR_037964",72203,"Mm.339566","NR_037964",null,"2610507I01Rik","5033414D05Rik","RIKEN cDNA 2610507I01 gene","ncRNA"]
[3362,"chr9",46282686,46283397,"+",0,"NA","promoter-TSS (NM_146000)","promoter-TSS (NM_146000)",29,"NM_146000",215051,"Mm.32648","NM_146000","ENSMUSG00000032077","Bud13","AV305342|D030060M11Rik","BUD13 homolog (yeast)","protein-coding"]
[3139,"chr8",39005617,39006564,"+",0,"NA","exon (NM_030254, exon 1 of 8)","exon (NM_030254, exon 1 of 8)",223,"NM_030254",80286,"Mm.272722","NM_030254",null,"Tusc3","AU022242|BC003311|N33","tumor suppressor candidate 3","protein-coding"]
[2616,"chr5",118560389,118561526,"+",0,"NA","intron (NM_172424, intron 1 of 30)","CpG-11438",238,"NM_172424",76199,"Mm.206238","NM_172424","ENSMUSG00000018076","Med13l","2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025","mediator complex subunit 13-like","protein-coding"]
[454,"chr11",59662087,59662867,"+",0,"NA","promoter-TSS (NM_012027)","promoter-TSS (NM_012027)",-18,"NM_201245",26936,"Mm.2402","NM_012027","ENSMUSG00000005417","Mprip","9530046C02|AA536749|AI647711|C76423|RIP3|Rhoip3|mKIAA0864|p116Rip","myosin phosphatase Rho interacting protein","protein-coding"]
[2538,"chr5",65536837,65538101,"+",0,"NA","5' UTR (NM_016786, exon 1 of 7)","5' UTR (NM_016786, exon 1 of 7)",224,"NM_001310619",53323,"Mm.319512","NM_016786","ENSMUSG00000029203","Ube2k","AW492011|D5Ertd601e|E2-25k|HIP-2|Hip2|Hypg|Lig","ubiquitin-conjugating enzyme E2K","protein-coding"]
[1364,"chr17",20945369,20946086,"+",0,"NA","intron (NM_016891, intron 1 of 14)","CpG",273,"NM_016891",51792,"Mm.294138","NM_016891","ENSMUSG00000007564","Ppp2r1a","6330556D22Rik|PP2A|PR65","protein phosphatase 2, regulatory subunit A, alpha","protein-coding"]
[1408,"chr17",27091055,27091799,"+",0,"NA","TTS (NR_106142)","TTS (NR_106142)",182,"NR_106142",102465779,null,"NR_106142","ENSMUSG00000098826","Mir7677","Gm27400|mmu-mir-7677","microRNA 7677","ncRNA"]
[2448,"chr4",155066752,155067338,"+",0,"NA","promoter-TSS (NM_001042407)","promoter-TSS (NM_001042407)",15,"NM_001042407",668173,"Mm.133114","NM_001042407","ENSMUSG00000029047","Pex10","AV128229|Gm142","peroxisomal biogenesis factor 10","protein-coding"]
[2969,"chr7",80269498,80270160,"+",0,"NA","5' UTR (NM_178070, exon 1 of 23)","5' UTR (NM_178070, exon 1 of 23)",174,"NM_178070",233405,"Mm.322870","NM_178070","ENSMUSG00000030534","Vps33b","-","vacuolar protein sorting 33B (yeast)","protein-coding"]
[634,"chr11",103697308,103698135,"+",0,"NA","promoter-TSS (NR_102388)","promoter-TSS (NR_102388)",-3,"NR_102389",399609,"Mm.351922","NR_102388",null,"C130046K22Rik","-","RIKEN cDNA C130046K22 gene","ncRNA"]
[2721,"chr5",149678090,149678610,"+",0,"NA","promoter-TSS (NM_001081204)","promoter-TSS (NM_001081204)",93,"NM_001081204",381694,"Mm.45060","NM_001081204","ENSMUSG00000051950","B3glct","B3galtl|Gm1057","beta-3-glucosyltransferase","protein-coding"]
[578,"chr11",89060001,89060906,"+",0,"NA","promoter-TSS (NR_110336)","promoter-TSS (NR_110336)",295,"NM_019505",56077,"Mm.153695","NM_019505","ENSMUSG00000000276","Dgke","C87606|DAGK6|DGK","diacylglycerol kinase, epsilon","protein-coding"]
[2551,"chr5",77265230,77266095,"+",0,"NA","5' UTR (NM_011263, exon 1 of 4)","5' UTR (NM_011263, exon 1 of 4)",168,"NM_011263",19712,"Mm.28840","NM_011263","ENSMUSG00000029249","Rest","2610008J04Rik|AA407358|NRSF|REST4","RE1-silencing transcription factor","protein-coding"]
[695,"chr11",120369542,120370145,"+",0,"NA","3' UTR (NM_027980, exon 10 of 10)","3' UTR (NM_027980, exon 10 of 10)",8309,"NM_172802",238021,"Mm.481403","NM_172802","ENSMUSG00000025380","Fscn2","A930022G03|Ahl8|C630046B20Rik","fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)","protein-coding"]
[978,"chr14",20929134,20930369,"+",0,"NA","intron (NM_009502, intron 1 of 20)","CpG",318,"NM_009502",22330,"Mm.279361","NM_009502","ENSMUSG00000021823","Vcl","9430097D22|AA571387|AI462105|AW545629","vinculin","protein-coding"]
[3324,"chr9",20888052,20888732,"+",0,"NA","intron (NM_145610, intron 1 of 10)","CpG",217,"NM_145610",235036,"Mm.2930","NM_145610","ENSMUSG00000004100","Ppan","A230087P06Rik|SSF1","peter pan homolog (Drosophila)","protein-coding"]
[2144,"chr3",89177364,89178106,"+",0,"NA","TTS (NM_001163432)","TTS (NM_001163432)",344,"NM_001309909",24045,"Mm.257052","NM_011886","ENSMUSG00000028049","Scamp3","Sc3","secretory carrier membrane protein 3","protein-coding"]
[325,"chr10",91082821,91083425,"+",0,"NA","promoter-TSS (NM_001042558)","promoter-TSS (NM_001042558)",84,"NM_026166",67454,"Mm.252843","NM_026166","ENSMUSG00000019975","Ikbip","1200009F10Rik|1700023M03Rik|D18354|Ikip","IKBKB interacting protein","protein-coding"]
[378,"chr11",4217932,4218715,"+",0,"NA","promoter-TSS (NM_028022)","promoter-TSS (NM_028022)",72,"NM_028022",71962,"Mm.7852","NM_028022","ENSMUSG00000020424","Gatsl3","2410008K03Rik","GATS protein-like 3","protein-coding"]
[3331,"chr9",21835031,21835926,"+",0,"NA","promoter-TSS (NM_001080940)","promoter-TSS (NM_001080940)",-32,"NM_001080940",624219,"Mm.440264","NM_001080940","ENSMUSG00000047822","Angptl8","EG624219|Gm6484|Rifl","angiopoietin-like 8","protein-coding"]
[889,"chr13",49187140,49188497,"+",0,"NA","intron (NM_013610, intron 1 of 3)","CpG",271,"NM_013610",18081,"Mm.18503","NM_013610","ENSMUSG00000037966","Ninj1","AU024536","ninjurin 1","protein-coding"]
[1233,"chr15",102976944,102977457,"+",0,"NA","intron (NM_008272, intron 1 of 2)","intron (NM_008272, intron 1 of 2)",168,"NM_008272",15427,"Mm.4765","NM_008272",null,"Hoxc9","Hox-3.2","homeobox C9","protein-coding"]
[3390,"chr9",59291225,59292058,"+",0,"NA","promoter-TSS (NM_028121)","promoter-TSS (NM_028121)",69,"NM_028121",72141,"Mm.22456","NM_028121","ENSMUSG00000025236","Adpgk","2610017G09Rik|Adp-gk|C77577","ADP-dependent glucokinase","protein-coding"]
[540,"chr11",78245329,78246351,"+",0,"NA","promoter-TSS (NM_009297)","promoter-TSS (NM_009297)",94,"NM_009143",20316,"Mm.20755","NM_009143","ENSMUSG00000002064","Sdf2","AI853825","stromal cell derived factor 2","protein-coding"]
[1162,"chr15",79286217,79287341,"+",0,"NA","exon (NM_001199025, exon 17 of 17)","exon (NM_001199025, exon 17 of 17)",-1270,"NM_177580",207495,"Mm.309647","NM_177580","ENSMUSG00000018126","Baiap2l2","BC048937","BAI1-associated protein 2-like 2","protein-coding"]
[1615,"chr18",77794364,77795222,"+",0,"NA","intron (NM_013831, intron 1 of 14)","CpG",243,"NM_013831",19201,"Mm.57174","NM_013831",null,"Pstpip2","MAYP|cmo","proline-serine-threonine phosphatase-interacting protein 2","protein-coding"]
[3137,"chr8",35587481,35589808,"+",0,"NA","exon (NM_001081279, exon 1 of 3)","exon (NM_001081279, exon 1 of 3)",376,"NR_040376",100504714,"Mm.381744","NR_040376","ENSMUSG00000097357","Gm16793","-","predicted gene, 16793","ncRNA"]
[2831,"chr6",116207725,116208600,"+",0,"NA","promoter-TSS (NR_131013)","promoter-TSS (NR_131013)",129,"NM_026585",28006,"Mm.28524","NM_026585","ENSMUSG00000024104","Fam21","A130095H06|C530005J20Rik|D6Wsu116e","family with sequence similarity 21","protein-coding"]
[211,"chr10",40883503,40884665,"+",0,"NA","promoter-TSS (NM_027879)","promoter-TSS (NM_027879)",550,"NM_031877",83767,"Mm.41353","NM_031877","ENSMUSG00000019831","Wasf1","AI195380|AI838537|Scar|WAVE|WAVE-1","WAS protein family, member 1","protein-coding"]
[684,"chr11",118476516,118477407,"+",0,"NA","promoter-TSS (NM_172573)","promoter-TSS (NM_172573)",1,"NM_172573",217364,"Mm.473963","NM_172573","ENSMUSG00000033857","Engase","C130099A03|D230014K01Rik","endo-beta-N-acetylglucosaminidase","protein-coding"]
[3065,"chr7",135537371,135538432,"+",0,"NA","promoter-TSS (NM_011212)","promoter-TSS (NM_011212)",77,"NM_001316678",19267,"Mm.945","NM_011212","ENSMUSG00000041836","Ptpre","PTPe|PTPepsilon|RPTPepsilon","protein tyrosine phosphatase, receptor type, E","protein-coding"]
[2073,"chr2",180178858,180181038,"+",0,"NA","promoter-TSS (NR_105972)","promoter-TSS (NR_105972)",-125,"NR_105972",102466785,null,"NR_105972","ENSMUSG00000098735","Mir7005","Gm27835|mmu-mir-7005","microRNA 7005","ncRNA"]
[1732,"chr19",42090176,42090967,"+",0,"NA","exon (NM_145501, exon 1 of 9)","exon (NM_145501, exon 1 of 9)",136,"NM_145501",84095,"Mm.117037","NM_145501","ENSMUSG00000025178","Pi4k2a","Pi4k2","phosphatidylinositol 4-kinase type 2 alpha","protein-coding"]
[861,"chr13",21981137,21982208,"+",0,"NA","exon (NM_001162929, exon 1 of 2)","exon (NM_001162929, exon 1 of 2)",478,"NM_001162929",195236,"Mm.204664","NM_001162928","ENSMUSG00000016982","Pom121l2","Gm24","POM121 membrane glycoprotein-like 2 (rat)","protein-coding"]
[337,"chr10",100015814,100016425,"+",0,"NA","intron (NM_013598, intron 1 of 9)","CpG",295,"NM_013598",17311,"Mm.45124","NM_013598","ENSMUSG00000019966","Kitl","Clo|Con|Gb|Kitlg|Mgf|SCF|SF|SLF|Sl|blz|contrasted","kit ligand","protein-coding"]
[3315,"chr9",7184163,7185174,"+",0,"NA","5' UTR (NM_029775, exon 1 of 8)","5' UTR (NM_029775, exon 1 of 8)",102,"NM_029775",76863,"Mm.27293","NM_029775","ENSMUSG00000032002","Dcun1d5","3110001A18Rik|4833420K19Rik|AW060460|D430047L21Rik","DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)","protein-coding"]
[2406,"chr4",139351999,139352816,"+",0,"NA","promoter-TSS (NM_001039200)","promoter-TSS (NM_001039200)",169,"NM_001290810",69902,"Mm.27871","NM_023536","ENSMUSG00000028741","Mrto4","2610012O22Rik|Mg684|Mrt4","mRNA turnover 4, homolog (S. cerevisiae)","protein-coding"]
[3172,"chr8",71272066,71272818,"+",0,"NA","promoter-TSS (NM_015742)","promoter-TSS (NM_015742)",148,"NM_001163042",76478,"Mm.27355","NM_029621","ENSMUSG00000035439","Haus8","2410004L22Rik|Hice1","4HAUS augmin-like complex, subunit 8","protein-coding"]
[76,"chr1",87326668,87327680,"+",0,"NA","intron (NM_146112, intron 1 of 28)","CpG",176,"NM_001110212",227331,"Mm.23065","NM_146112","ENSMUSG00000048000","Gigyf2","2610016F01Rik|A830080H02Rik|AI852361|AW259676|BC006835|Tnrc15|mKIAA0642","GRB10 interacting GYF protein 2","protein-coding"]
[1924,"chr2",91944488,91945018,"+",0,"NA","TTS (NR_105965)","TTS (NR_105965)",177,"NR_105965",102465604,null,"NR_105965","ENSMUSG00000098651","Mir6999","Gm27673|mmu-mir-6999","microRNA 6999","ncRNA"]
[2718,"chr5",147860009,147861062,"+",0,"NA","promoter-TSS (NM_025624)","promoter-TSS (NM_025624)",-93,"NM_025624",66537,"Mm.332855","NM_025624",null,"Pomp","2510048O06Rik|Ump1","proteasome maturation protein","protein-coding"]
[3042,"chr7",127233092,127233673,"+",0,"NA","promoter-TSS (NM_146201)","promoter-TSS (NM_146201)",-61,"NM_146201",233887,"Mm.258371","NM_146201","ENSMUSG00000045598","Zfp553","2600009K23Rik|AI431057|BC026401|C330013F15Rik|ENSMUSG00000054461|Znf48","zinc finger protein 553","protein-coding"]
[982,"chr14",25841998,25842833,"+",0,"NA","intron (NM_013469, intron 1 of 14)","CpG",260,"NM_013469",11744,"Mm.294083","NM_013469","ENSMUSG00000021866","Anxa11","A830099O17Rik|Anx11","annexin A11","protein-coding"]
[571,"chr11",87616798,87617560,"+",0,"NA","promoter-TSS (NM_001045527)","promoter-TSS (NM_001045527)",15,"NM_001045527",327992,"Mm.390371","NM_001045527","ENSMUSG00000070345","Hsf5","Gm739|MLZ-220","heat shock transcription factor family member 5","protein-coding"]
[1214,"chr15",99251638,99252246,"+",0,"NA","promoter-TSS (NM_016766)","promoter-TSS (NM_016766)",19,"NM_001164156",51812,"Mm.383472","NM_016766","ENSMUSG00000037570","Mcrs1","C78274|ICP22BP|MSP58|P78","microspherule protein 1","protein-coding"]
[1190,"chr15",85831904,85832944,"+",0,"NA","intron (NM_001033337, intron 1 of 13)","CpG",120,"NM_001033337",239570,"Mm.151748","NM_001033337","ENSMUSG00000035944","Ttc38","9030019H09","tetratricopeptide repeat domain 38","protein-coding"]
[2592,"chr5",112276556,112277195,"+",0,"NA","intron (NM_009419, intron 1 of 6)","CpG",168,"NM_009419",22022,"Mm.250631","NM_009419","ENSMUSG00000029344","Tpst2","AI448750|D5Ucla3|Tango13b|grm|grt","protein-tyrosine sulfotransferase 2","protein-coding"]
[389,"chr11",16257466,16258027,"+",0,"NA","promoter-TSS (NM_145967)","promoter-TSS (NM_145967)",22,"NM_145967",211739,"Mm.284015","NM_145967","ENSMUSG00000048834","Vstm2a","Vstm2","V-set and transmembrane domain containing 2A","protein-coding"]
[1660,"chr19",6334799,6335984,"+",0,"NA","5' UTR (NM_001168490, exon 1 of 8)","5' UTR (NM_001168490, exon 1 of 8)",352,"NM_008583",17283,"Mm.12917","NM_008583","ENSMUSG00000024947","Men1","AW045611","multiple endocrine neoplasia 1","protein-coding"]
[3207,"chr8",86745278,86746517,"+",0,"NA","non-coding (NR_027829, exon 1 of 1)","non-coding (NR_027829, exon 1 of 1)",109,"NM_009172",20437,"Mm.324553","NM_009172","ENSMUSG00000036840","Siah1a","AA982064|AI853500|Sinh1a","seven in absentia 1A","protein-coding"]
[1171,"chr15",81189986,81191231,"+",0,"NA","promoter-TSS (NR_015603)","promoter-TSS (NR_015603)",149,"NM_001082536",223701,"Mm.439814","NM_153049","ENSMUSG00000042292","Mkl1","AMKL|Bsac|Mal|Mrtf-A","MKL (megakaryoblastic leukemia)/myocardin-like 1","protein-coding"]
[1345,"chr16",93883530,93884730,"+",0,"NA","intron (NM_028083, intron 1 of 13)","CpG",229,"NM_028083",110749,"Mm.274222","NM_028083","ENSMUSG00000022945","Chaf1b","2600017H24Rik|C76145|CAF-I p60|CAF-Ip60|CAF1|CAF1A|CAF1P60|MPHOSPH7","chromatin assembly factor 1, subunit B (p60)","protein-coding"]
[2290,"chr4",84884110,84884979,"+",0,"NA","exon (NM_177385, exon 1 of 5)","exon (NM_177385, exon 1 of 5)",235,"NM_177385",338349,"Mm.440562","NM_175275","ENSMUSG00000038070","Cntln","AI448092|B430108F07Rik|D530005L17Rik","centlein, centrosomal protein","protein-coding"]
[966,"chr14",8665830,8666425,"+",0,"NA","promoter-TSS (NR_045968)","promoter-TSS (NR_045968)",163,"NM_028934",74430,"Mm.271901","NM_028934","ENSMUSG00000021747","4930452B06Rik","4933406L09Rik|AI854000","RIKEN cDNA 4930452B06 gene","protein-coding"]
[1123,"chr15",73747504,73748749,"+",0,"NA","promoter-TSS (NM_008975)","promoter-TSS (NM_008975)",100,"NM_008975",19245,"Mm.390807","NM_008975","ENSMUSG00000059895","Ptp4a3","AV088979|Prl-3|pPtp4a3","protein tyrosine phosphatase 4a3","protein-coding"]
[2314,"chr4",107433902,107435294,"+",0,"NA","promoter-TSS (NM_147221)","promoter-TSS (NM_147221)",-121,"NM_147221",230587,"Mm.331757","NM_147221","ENSMUSG00000034762","Glis1","Gli5|Gli6|GliH1","GLIS family zinc finger 1","protein-coding"]
[2216,"chr3",146404170,146405192,"+",0,"NA","promoter-TSS (NM_138744)","promoter-TSS (NM_138744)",39,"NM_138744",99167,"Mm.200783","NM_138744","ENSMUSG00000036825","Ssx2ip","AU014939|AU042321|Adip","synovial sarcoma, X breakpoint 2 interacting protein","protein-coding"]
[992,"chr14",30714808,30716696,"+",0,"NA","5' UTR (NM_001166532, exon 1 of 21)","5' UTR (NM_001166532, exon 1 of 21)",137,"NM_001166532",54650,"Mm.294662","NM_019460","ENSMUSG00000006527","Sfmbt1","4930442N21Rik|9330180L21Rik|AA536974|Sfmbt|Smr","Scm-like with four mbt domains 1","protein-coding"]
[236,"chr10",61475631,61476797,"+",0,"NA","intron (NM_153542, intron 1 of 4)","CpG",381,"NM_153542",216011,"Mm.136116","NM_153542","ENSMUSG00000037151","Lrrc20","BC036304","leucine rich repeat containing 20","protein-coding"]
[758,"chr12",72939464,72940770,"+",0,"NA","exon (NM_011384, exon 1 of 2)","exon (NM_011384, exon 1 of 2)",235,"NM_011384",20476,"Mm.57138","NM_011384","ENSMUSG00000021099","Six6","Optx2|Six9","sine oculis-related homeobox 6","protein-coding"]
[1954,"chr2",121955734,121956239,"+",0,"NA","promoter-TSS (NM_212450)","promoter-TSS (NM_212450)",-15,"NM_001290992",329506,"Mm.249405","NM_212450",null,"Ctdspl2","D2Ertd485e","CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2","protein-coding"]
[2843,"chr6",122874350,122874854,"+",0,"NA","promoter-TSS (NM_026267)","promoter-TSS (NM_026267)",45,"NM_026267",67602,"Mm.288114","NM_026267","ENSMUSG00000030327","Necap1","1200016B17Rik|AI747569|mFLJ00061","NECAP endocytosis associated 1","protein-coding"]
[218,"chr10",42678770,42679431,"+",0,"NA","exon (NM_172416, exon 1 of 6)","exon (NM_172416, exon 1 of 6)",184,"NM_172416",14628,"Mm.46636","NM_172416","ENSMUSG00000038280","Ostm1","1200002H13Rik|HSPC019|gl","osteopetrosis associated transmembrane protein 1","protein-coding"]
[706,"chr11",120725347,120726573,"+",0,"NA","exon (NM_026428, exon 6 of 8)","exon (NM_026428, exon 6 of 8)",1321,"NM_026428",67880,"Mm.231091","NM_026428","ENSMUSG00000039450","Dcxr","0610038K04Rik|1810027P18Rik","dicarbonyl L-xylulose reductase","protein-coding"]
[14,"chr1",34459371,34460289,"+",0,"NA","promoter-TSS (NM_011206)","promoter-TSS (NM_011206)",84,"NM_011206",19253,"Mm.361","NM_011206","ENSMUSG00000026126","Ptpn18","FLP1|HSCF|PTP-HSCF|PTP-K1|Ptpk1","protein tyrosine phosphatase, non-receptor type 18","protein-coding"]
[2345,"chr4",126096484,126097029,"+",0,"NA","5' UTR (NM_138721, exon 1 of 2)","5' UTR (NM_138721, exon 1 of 2)",103,"NM_138721",116748,"Mm.41865","NM_138721","ENSMUSG00000050188","Lsm10","-","U7 snRNP-specific Sm-like protein LSM10","protein-coding"]
[3124,"chr8",18595013,18595814,"+",0,"NA","5' UTR (NM_173189, exon 1 of 14)","5' UTR (NM_173189, exon 1 of 14)",240,"NM_173189",244329,"Mm.235296","NM_173189","ENSMUSG00000039842","Mcph1","5430437K10Rik|BRIT1|D030046N04Rik|MCT","microcephaly, primary autosomal recessive 1","protein-coding"]
[2587,"chr5",110652906,110654085,"+",0,"NA","promoter-TSS (NM_027156)","promoter-TSS (NM_027156)",44,"NM_027156",69663,"Mm.5267","NM_027156","ENSMUSG00000029504","Ddx51","2310061O04Rik|AA537002|C81583|R75505","DEAD (Asp-Glu-Ala-Asp) box polypeptide 51","protein-coding"]
[1608,"chr18",75005697,75006240,"+",0,"NA","promoter-TSS (NM_001001181)","promoter-TSS (NM_001001181)",68,"NM_001001181",407819,"Mm.29866","NM_001001181","ENSMUSG00000036299","BC031181","-","cDNA sequence BC031181","protein-coding"]
[3391,"chr9",59539411,59539880,"+",0,"NA","promoter-TSS (NM_010421)","promoter-TSS (NM_010421)",-22,"NM_010421",15211,"Mm.2284","NM_010421","ENSMUSG00000025232","Hexa","Hex-1","hexosaminidase A","protein-coding"]
[2973,"chr7",81213016,81214309,"+",0,"NA","promoter-TSS (NM_008803)","promoter-TSS (NM_008803)",-142,"NM_008803",18584,"Mm.371577","NM_008803",null,"Pde8a","AI551852|Pde8","phosphodiesterase 8A","protein-coding"]
[2328,"chr4",117127974,117128657,"+",0,"NA","TTS (NM_001313916)","TTS (NM_001313916)",1502,"NM_175030",242646,"Mm.358914","NM_175030","ENSMUSG00000047671","Tctex1d4","4833401D15Rik","Tctex1 domain containing 4","protein-coding"]
[2999,"chr7",101108757,101109251,"+",0,"NA","5' UTR (NM_001146010, exon 1 of 20)","5' UTR (NM_001146010, exon 1 of 20)",229,"NM_199012",207278,"Mm.263041","NM_199012","ENSMUSG00000030691","Fchsd2","BC034086|R74866|Sh3md3|mKIAA0769","FCH and double SH3 domains 2","protein-coding"]
[2567,"chr5",102481165,102481835,"+",0,"NA","5' UTR (NM_146161, exon 1 of 9)","5' UTR (NM_146161, exon 1 of 9)",109,"NM_029270",231532,"Mm.440191","NM_029270","ENSMUSG00000057315","Arhgap24","0610025G21Rik","Rho GTPase activating protein 24","protein-coding"]
[3232,"chr8",105224964,105225565,"+",0,"NA","promoter-TSS (NM_145604)","promoter-TSS (NM_145604)",76,"NM_145604",234678,"Mm.27186","NM_145604","ENSMUSG00000031889","D230025D16Rik","BC006874|Lin10","RIKEN cDNA D230025D16 gene","protein-coding"]
[2474,"chr5",21784516,21785386,"+",0,"NA","promoter-TSS (NM_011188)","promoter-TSS (NM_011188)",214,"NM_009584",22791,"Mm.266312","NM_009584","ENSMUSG00000029014","Dnajc2","AU020218|MIDA1|Zrf1|Zrf2","DnaJ (Hsp40) homolog, subfamily C, member 2","protein-coding"]
[2889,"chr7",24969732,24970293,"+",0,"NA","promoter-TSS (NR_106013)","promoter-TSS (NR_106013)",63,"NR_106013",102465633,null,"NR_106013","ENSMUSG00000098802","Mir7046","Gm27469|mmu-mir-7046","microRNA 7046","ncRNA"]
[234,"chr10",60346729,60347480,"+",0,"NA","intron (NM_001159572, intron 1 of 6)","intron (NM_001159572, intron 1 of 6)",253,"NM_028732",74048,"Mm.273584","NM_028732","ENSMUSG00000020101","Vsir","4632428N05Rik|Dies1|PD-1H|VISTA","V-set immunoregulatory receptor","protein-coding"]
[594,"chr11",97029812,97030691,"+",0,"NA","intron (NM_146027, intron 1 of 7)","intron (NM_146027, intron 1 of 7)",299,"NM_146027",217140,"Mm.46189","NM_146027","ENSMUSG00000020877","Scrn2","AV001119|D11Moh48|SES2","secernin 2","protein-coding"]
[2924,"chr7",44878277,44879490,"+",0,"NA","TTS (NM_029365)","TTS (NM_029365)",-9095,"NM_133949",84113,"Mm.42855","NM_133949","ENSMUSG00000038502","Ptov1","1110030G05Rik|AU041779|Gcap3","prostate tumor over expressed gene 1","protein-coding"]
[1438,"chr17",33940612,33941353,"+",0,"NA","promoter-TSS (NM_010385)","promoter-TSS (NM_010385)",259,"NM_020603",57315,"Mm.2437","NM_020603","ENSMUSG00000024312","Wdr46","2310007I04Rik|Bing4|C78447|C78559","WD repeat domain 46","protein-coding"]
[3289,"chr8",122442664,122443956,"+",0,"NA","promoter-TSS (NR_045696)","promoter-TSS (NR_045696)",112,"NM_138656",192156,"Mm.28146","NM_138656","ENSMUSG00000006517","Mvd","C78718|Mpd","mevalonate (diphospho) decarboxylase","protein-coding"]
[3158,"chr8",69822518,69823198,"+",0,"NA","TTS (NM_198101)","TTS (NM_198101)",293,"NM_020028",53978,"Mm.23253","NM_020028","ENSMUSG00000031861","Lpar2","Edg4|IPA2|LPA2","lysophosphatidic acid receptor 2","protein-coding"]
[1903,"chr2",74752646,74753161,"+",0,"NA","non-coding (NR_110447, exon 1 of 2)","non-coding (NR_110447, exon 1 of 2)",219,"NR_110447",102634401,"Mm.235021","NR_110447","ENSMUSG00000085015","LOC102634401","-","uncharacterized LOC102634401","ncRNA"]
[2767,"chr6",56831879,56832418,"+",0,"NA","promoter-TSS (NM_012056)","promoter-TSS (NM_012056)",89,"NM_012056",27055,"Mm.20943","NM_012056","ENSMUSG00000029781","Fkbp9","1810014L23|AW549641|FKBP-63|FKBP-9|FKBP60|FKBP63|FKBP65RS","FK506 binding protein 9","protein-coding"]
[2188,"chr3",121952986,121953984,"+",0,"NA","intron (NM_172525, intron 1 of 22)","CpG",159,"NM_172525",214137,"Mm.229287","NM_172525","ENSMUSG00000039831","Arhgap29","6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1","Rho GTPase activating protein 29","protein-coding"]
[1778,"chr2",11171991,11172540,"+",0,"NA","promoter-TSS (NM_008859)","promoter-TSS (NM_008859)",-117,"NM_008859",18761,"Mm.329993","NM_008859","ENSMUSG00000026778","Prkcq","A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq","protein kinase C, theta","protein-coding"]
[2339,"chr4",124881330,124881968,"+",0,"NA","promoter-TSS (NM_177671)","promoter-TSS (NM_177671)",-136,"NM_001256432",230735,"Mm.171490","NM_177671","ENSMUSG00000028876","Epha10","A330090H18","Eph receptor A10","protein-coding"]
[1859,"chr2",32757073,32757880,"+",0,"NA","exon (NM_001290563, exon 15 of 15)","exon (NM_001290563, exon 15 of 15)",242,"NM_152800",30933,"Mm.200695","NM_152800","ENSMUSG00000009563","Tor2a","Prosalusin","torsin family 2, member A","protein-coding"]
[160,"chr1",180330455,180331186,"+",0,"NA","promoter-TSS (NR_003623)","promoter-TSS (NR_003623)",-271,"NR_003623",277333,"Mm.389223","NM_199472",null,"Gm5069","EG277333","glyceraldehyde-3-phosphate dehydrogenase pseudogene","pseudo"]
[3116,"chr8",13159091,13159840,"+",0,"NA","intron (NM_010684, intron 1 of 8)","L1MDb|LINE|L1",330,"NM_010684",16783,"Mm.16716","NM_010684","ENSMUSG00000031447","Lamp1","AI196048|CD107a|Lamp-1","lysosomal-associated membrane protein 1","protein-coding"]
[2776,"chr6",72549424,72550159,"+",0,"NA","5' UTR (NM_001271395, exon 1 of 10)","5' UTR (NM_001271395, exon 1 of 10)",144,"NM_001271395",12332,"Mm.18626","NM_007599","ENSMUSG00000056737","Capg","gCap39|mbh1","capping protein (actin filament), gelsolin-like","protein-coding"]
[98,"chr1",105780172,105780843,"+",0,"NA","promoter-TSS (NM_009399)","promoter-TSS (NM_009399)",-216,"NM_009399",21934,"Mm.6251","NM_009399","ENSMUSG00000026321","Tnfrsf11a","Ly109|ODFR|OFE|Rank|TRANCE-R|mRANK","tumor necrosis factor receptor superfamily, member 11a, NFKB activator","protein-coding"]
[2901,"chr7",28277615,28278339,"+",0,"NA","exon (NM_001177427, exon 1 of 1)","exon (NM_001177427, exon 1 of 1)",271,"NM_001177427",434156,"Mm.118535","NM_001177427","ENSMUSG00000070705","Eid2b","3010005C08Rik","EP300 interacting inhibitor of differentiation 2B","protein-coding"]
[1048,"chr14",70442791,70443971,"+",0,"NA","promoter-TSS (NM_025945)","promoter-TSS (NM_025945)",90,"NM_025945",67065,"Mm.20420","NM_025945","ENSMUSG00000000776","Polr3d","2810426M17Rik|44kDa|AI326118|AW489084|BN51T|RPC4|TSBN51","polymerase (RNA) III (DNA directed) polypeptide D","protein-coding"]
[1278,"chr16",18581221,18583096,"+",0,"NA","exon (NM_001285476, exon 7 of 7)","exon (NM_001285476, exon 7 of 7)",4811,"NM_011532",21380,"Mm.295194","NM_011532","ENSMUSG00000009097","Tbx1","-","T-box 1","protein-coding"]
[2434,"chr4",152039049,152040262,"+",0,"NA","exon (NM_001159599, exon 1 of 12)","exon (NM_001159599, exon 1 of 12)",334,"NM_028727",74035,"Mm.275803","NM_028727","ENSMUSG00000028948","Nol9","4632412I24Rik|6030462G04Rik|AI449622|AW490720","nucleolar protein 9","protein-coding"]
[1000,"chr14",32085248,32086080,"+",0,"NA","promoter-TSS (NM_001047433)","promoter-TSS (NM_001047433)",28,"NR_104303",105638,"Mm.2519","NM_172254","ENSMUSG00000021905","Dph3","DELGIP1|DelgipP1|Desr1|KTI11|Zcsl2","diphthamine biosynthesis 3","protein-coding"]
[1381,"chr17",24695675,24696729,"+",0,"NA","promoter-TSS (NM_027988)","promoter-TSS (NM_027988)",-32,"NM_027988",71893,"Mm.390971","NM_027988","ENSMUSG00000019320","Noxo1","2310034C04Rik|P41NOX|P41NOXA|P41NOXB|P41NOXC|Snx28|hslt","NADPH oxidase organizer 1","protein-coding"]
[43,"chr1",59912749,59913803,"+",0,"NA","exon (NM_001037725, exon 1 of 8)","exon (NM_001037725, exon 1 of 8)",270,"NM_001037725",72750,"Mm.258250","NM_001037725","ENSMUSG00000041040","Fam117b","2810425F24Rik|6330416D14Rik|Als2cr13","family with sequence similarity 117, member B","protein-coding"]
[1061,"chr14",76504093,76504703,"+",0,"NA","promoter-TSS (NM_009366)","promoter-TSS (NM_009366)",-112,"NM_009366",21807,"Mm.153272","NM_009366","ENSMUSG00000022010","Tsc22d1","AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22","TSC22 domain family, member 1","protein-coding"]
[2582,"chr5",108461047,108462169,"+",0,"NA","intron (NM_172716, intron 1 of 10)","CpG",276,"NM_172716",69587,"Mm.261218","NM_172716",null,"Pcgf3","2310035N15Rik|AI662857|D630042K08Rik|DONG1|E430039C14|RNF3A|Rnf3","polycomb group ring finger 3","protein-coding"]
[2054,"chr2",167688510,167690258,"+",0,"NA","exon (NM_009883, exon 1 of 1)","exon (NM_009883, exon 1 of 1)",469,"NM_001287738",12608,"Mm.439656","NM_009883","ENSMUSG00000056501","Cebpb","C/EBPbeta|CRP2|IL-6DBP|LAP|LIP|NF-IL6|NF-M|Nfil6","CCAAT/enhancer binding protein (C/EBP), beta","protein-coding"]
[3502,"chr9",121777570,121779238,"+",0,"NA","exon (NM_028202, exon 1 of 6)","exon (NM_028202, exon 1 of 6)",797,"NM_028202",72330,"Mm.45734","NM_028202","ENSMUSG00000074001","Klhl40","2310024D23Rik|Kbtbd5","kelch-like 40","protein-coding"]
[1728,"chr19",41599951,41600978,"+",0,"NA","exon (NM_015748, exon 37 of 37)","exon (NM_015748, exon 37 of 37)",11813,"NR_106166",102465884,null,"NR_106166","ENSMUSG00000098286","Mir8091","Gm27575|mmu-mir-8091","microRNA 8091","ncRNA"]
[2785,"chr6",84008339,84009071,"+",0,"NA","5' UTR (NM_001077694, exon 1 of 55)","5' UTR (NM_001077694, exon 1 of 55)",107,"NM_001077694",26903,"Mm.220982","NM_021469","ENSMUSG00000033788","Dysf","2310004N10Rik|AI604795|D6Pas3","dysferlin","protein-coding"]
[3224,"chr8",94983841,94984494,"+",0,"NA","promoter-TSS (NM_018882)","promoter-TSS (NM_018882)",-232,"NM_018882",14766,"Mm.290834","NM_018882","ENSMUSG00000031785","Adgrg1","Cyt28|Gpr56|TM7LN4|TM7XN1","adhesion G protein-coupled receptor G1","protein-coding"]
[193,"chr10",13090359,13091335,"+",0,"NA","promoter-TSS (NR_131912)","promoter-TSS (NR_131912)",2,"NR_131912",338438,null,"NR_131912",null,"Hymai","-","hydatidiform mole associated and imprinted transcript","ncRNA"]
[288,"chr10",80277413,80278384,"+",0,"NA","promoter-TSS (NR_105876)","promoter-TSS (NR_105876)",-266,"NR_105876",102466207,null,"NR_105876","ENSMUSG00000098672","Mir6911","Gm27822|mmu-mir-6911","microRNA 6911","ncRNA"]
[119,"chr1",134559957,134561164,"+",0,"NA","intron (NM_152895, intron 1 of 26)","CpG",382,"NM_152895",75605,"Mm.28995","NM_152895",null,"Kdm5b","2010009J12Rik|2210016I17Rik|AW556288|D1Ertd202e|Jarid1b|PLU-1|PUT1|Plu1|RBBP2H1A|Rb-Bp2|mKIAA4034","lysine (K)-specific demethylase 5B","protein-coding"]
[1555,"chr18",34840332,34841069,"+",0,"NA","5' UTR (NM_144865, exon 1 of 8)","5' UTR (NM_144865, exon 1 of 8)",111,"NM_144865",225362,"Mm.293588","NM_144865","ENSMUSG00000038555","Reep2","-","receptor accessory protein 2","protein-coding"]
[586,"chr11",94564269,94565529,"+",0,"NA","promoter-TSS (NM_007689)","promoter-TSS (NM_007689)",-175,"NM_007689",12643,"Mm.440523","NM_007689","ENSMUSG00000039084","Chad","SLRR4A","chondroadherin","protein-coding"]
[2870,"chr7",5051366,5051920,"+",0,"NA","5' UTR (NM_026900, exon 1 of 2)","5' UTR (NM_026900, exon 1 of 2)",111,"NM_026900",68992,"Mm.41484","NM_026900","ENSMUSG00000055633","Zfp580","1500015O20Rik|AI838225|Znf580","zinc finger protein 580","protein-coding"]
[2859,"chr6",145934027,145934721,"+",0,"NA","intron (NM_010656, intron 1 of 2)","intron (NM_010656, intron 1 of 2)",227,"NM_010656",16651,"Mm.49689","NM_010656","ENSMUSG00000030255","Sspn","Krag","sarcospan","protein-coding"]
[410,"chr11",35769260,35770381,"+",0,"NA","5' UTR (NM_145962, exon 1 of 7)","5' UTR (NM_145962, exon 1 of 7)",325,"NM_145962",211347,"Mm.255044","NM_145962","ENSMUSG00000018846","Pank3","-","pantothenate kinase 3","protein-coding"]
[3193,"chr8",84066071,84066890,"+",0,"NA","promoter-TSS (NM_009055)","promoter-TSS (NM_009055)",-356,"NM_009055",19724,"Mm.7892","NM_009055","ENSMUSG00000031706","Rfx1","AI047719|AI385641","regulatory factor X, 1 (influences HLA class II expression)","protein-coding"]
[999,"chr14",31494505,31495463,"+",0,"NA","promoter-TSS (NM_025907)","promoter-TSS (NM_025907)",-7,"NM_025907",67011,"Mm.291731","NM_025907",null,"Mettl6","1600013P15Rik|AI467521|AU020711","methyltransferase like 6","protein-coding"]
[3019,"chr7",113207462,113208151,"+",0,"NA","intron (NM_001243048, intron 1 of 16)","CpG",341,"NM_007489",11865,"Mm.33970","NM_007489","ENSMUSG00000055116","Arntl","Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b'","aryl hydrocarbon receptor nuclear translocator-like","protein-coding"]
[3374,"chr9",54698893,54700306,"+",0,"NA","promoter-TSS (NM_021422)","promoter-TSS (NM_021422)",40,"NM_021422",58233,"Mm.489676","NM_021422","ENSMUSG00000032285","Dnaja4","1110021L12Rik|AV358213|Dj4|Hsj4|mmDjA4","DnaJ (Hsp40) homolog, subfamily A, member 4","protein-coding"]
[1180,"chr15",83100012,83100592,"+",0,"NA","promoter-TSS (NM_023475)","promoter-TSS (NM_023475)",97,"NM_023475",68607,"Mm.30056","NM_023475","ENSMUSG00000058586","Serhl","0610008B10Rik|1110019M09Rik|AU019786","serine hydrolase-like","protein-coding"]
[2169,"chr3",100921969,100922559,"+",0,"NA","promoter-TSS (NM_194343)","promoter-TSS (NM_194343)",-229,"NM_001165952",229644,"Mm.189351","NM_194343","ENSMUSG00000033233","Trim45","4921530N01Rik","tripartite motif-containing 45","protein-coding"]
[430,"chr11",52360103,52361974,"+",0,"NA","5' UTR (NM_011694, exon 1 of 9)","5' UTR (NM_011694, exon 1 of 9)",176,"NM_011694",22333,"Mm.3555","NM_011694","ENSMUSG00000020402","Vdac1","AL033343|Vdac5|mVDAC1|mVDAC5","voltage-dependent anion channel 1","protein-coding"]
[1185,"chr15",84719866,84720587,"+",0,"NA","promoter-TSS (NR_040347)","promoter-TSS (NR_040347)",40,"NR_040347",328576,"Mm.400211","NR_040347",null,"Gm20556","A430075N02","predicted gene, 20556","ncRNA"]
[447,"chr11",58008398,58009416,"+",0,"NA","promoter-TSS (NM_028451)","promoter-TSS (NM_028451)",-157,"NM_028451",73158,"Mm.248843","NM_028451","ENSMUSG00000037331","Larp1","1810024J12Rik|3110040D16Rik|Larp|mKIAA0731","La ribonucleoprotein domain family, member 1","protein-coding"]
[3258,"chr8",110741823,110742752,"+",0,"NA","TTS (NM_198625)","TTS (NM_198625)",16561,"NM_001310591",244654,"Mm.490385","NM_198625","ENSMUSG00000033763","Mtss1l","ABBA","metastasis suppressor 1-like","protein-coding"]
[1446,"chr17",34898127,34898683,"+",0,"NA","promoter-TSS (NM_147151)","promoter-TSS (NM_147151)",-87,"NM_001286575",110147,"Mm.35345","NM_145830","ENSMUSG00000013787","Ehmt2","Bat8|D17Ertd710e|G9a|KMT1C|NG36","euchromatic histone lysine N-methyltransferase 2","protein-coding"]
[1741,"chr19",45150504,45151330,"+",0,"NA","exon (NM_021901, exon 1 of 3)","exon (NM_021901, exon 1 of 3)",202,"NM_021901",21908,"Mm.391203","NM_021901","ENSMUSG00000025215","Tlx1","Hox-11|Hox11","T cell leukemia, homeobox 1","protein-coding"]
[2118,"chr3",61002459,61003597,"+",0,"NA","5' UTR (NM_008772, exon 1 of 2)","5' UTR (NM_008772, exon 1 of 2)",243,"NM_001282016",18441,"Mm.281452","NM_008772","ENSMUSG00000027765","P2ry1","P2Y1","purinergic receptor P2Y, G-protein coupled 1","protein-coding"]
[415,"chr11",45979813,45981287,"+",0,"NA","exon (NM_173384, exon 1 of 5)","exon (NM_173384, exon 1 of 5)",240,"NM_173384",214105,"Mm.66708","NM_173384","ENSMUSG00000040489","Sox30","-","SRY (sex determining region Y)-box 30","protein-coding"]
[1130,"chr15",75940804,75941525,"+",0,"NA","intron (NM_030199, intron 1 of 1)","CpG",212,"NM_030199",78834,"Mm.273264","NM_030199","ENSMUSG00000050846","Zfp623","2610029D06Rik|AI847036","zinc finger protein 623","protein-coding"]
[1315,"chr16",38088380,38090132,"+",0,"NA","promoter-TSS (NR_033221)","promoter-TSS (NR_033221)",4,"NR_033221",414072,"Mm.483602","NR_033221",null,"BC031361","-","cDNA sequence BC031361","ncRNA"]
[189,"chr10",7832010,7832645,"+",0,"NA","promoter-TSS (NM_172785)","promoter-TSS (NM_172785)",-143,"NM_172785",237256,"Mm.140055","NM_172785","ENSMUSG00000039981","Zc3h12d","D730019B10Rik|TFL","zinc finger CCCH type containing 12D","protein-coding"]
[2597,"chr5",114774498,114775291,"+",0,"NA","promoter-TSS (NR_027872)","promoter-TSS (NR_027872)",89,"NR_027872",67642,"Mm.482535","NM_175120","ENSMUSG00000092183","4930515G01Rik","-","RIKEN cDNA 4930515G01 gene","ncRNA"]
[1292,"chr16",30008272,30009227,"+",0,"NA","promoter-TSS (NR_033631)","promoter-TSS (NR_033631)",82,"NR_033631",100043102,"Mm.30797","NR_033631","ENSMUSG00000097184","4632428C04Rik","Gm4231","RIKEN cDNA 4632428C04 gene","ncRNA"]
[2330,"chr4",120160767,120161717,"+",0,"NA","promoter-TSS (NM_007902)","promoter-TSS (NM_007902)",-182,"NM_007902",13615,"Mm.284855","NM_007902","ENSMUSG00000028635","Edn2","VIC","endothelin 2","protein-coding"]
[1356,"chr17",8801739,8802201,"+",0,"NA","5' UTR (NM_011866, exon 1 of 22)","5' UTR (NM_011866, exon 1 of 22)",225,"NM_011866",23984,"Mm.87161","NM_011866","ENSMUSG00000023868","Pde10a","-","phosphodiesterase 10A","protein-coding"]
[2849,"chr6",125321120,125321960,"+",0,"NA","5' UTR (NM_011324, exon 1 of 12)","5' UTR (NM_011324, exon 1 of 12)",200,"NM_011324",20276,"Mm.144114","NM_011324","ENSMUSG00000030340","Scnn1a","ENaC|SCNEA|Scnn1|mENaC","sodium channel, nonvoltage-gated 1 alpha","protein-coding"]
[480,"chr11",68989729,68990595,"+",0,"NA","TTS (NR_037222)","TTS (NR_037222)",516,"NR_037222",100526545,null,"NR_037222","ENSMUSG00000092727","Mir3062","mir-3062|mmu-mir-3062","microRNA 3062","ncRNA"]
[107,"chr1",131527783,131528481,"+",0,"NA","promoter-TSS (NM_001081011)","promoter-TSS (NM_001081011)",143,"NM_175382",108900,"Mm.31278","NM_175382","ENSMUSG00000055184","Fam72a","2700049P18Rik|P17","family with sequence similarity 72, member A","protein-coding"]
[438,"chr11",54100668,54101538,"+",0,"NA","intron (NM_001136076, intron 1 of 15)","CpG",179,"NM_011031",18452,"Mm.3705","NM_011031","ENSMUSG00000018906","P4ha2","AA407196|C76437|P4hl","procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide","protein-coding"]
[1153,"chr15",78899622,78900075,"+",0,"NA","promoter-TSS (NM_001316684)","promoter-TSS (NM_001316684)",80,"NM_009164",20401,"Mm.4462","NM_009164","ENSMUSG00000022436","Sh3bp1","3BP-1","SH3-domain binding protein 1","protein-coding"]
[1871,"chr2",36230382,36230905,"+",0,"NA","intron (NM_008969, intron 1 of 10)","CpG",217,"NM_008969",19224,"Mm.275434","NM_008969","ENSMUSG00000047250","Ptgs1","COX1|Cox-1|Cox-3|PGHS-1|PHS 1|Pghs1","prostaglandin-endoperoxide synthase 1","protein-coding"]
[2385,"chr4",134864430,134865109,"+",0,"NA","intron (NM_011270, intron 1 of 9)","intron (NM_011270, intron 1 of 9)",233,"NM_011270",19746,"Mm.195461","NM_011270","ENSMUSG00000028825","Rhd","Rh|Rhced|Rhl1","Rh blood group, D antigen","protein-coding"]
[87,"chr1",92831513,92832872,"+",0,"NA","intron (NM_016696, intron 1 of 8)","CpG",506,"NM_016696",14733,"Mm.297976","NM_016696","ENSMUSG00000034220","Gpc1","AI462976","glypican 1","protein-coding"]
[1022,"chr14",54464015,54464842,"+",0,"NA","5' UTR (NM_022993, exon 1 of 7)","5' UTR (NM_022993, exon 1 of 7)",281,"NM_022993",65107,"Mm.472719","NM_022993",null,"Lrp10","Lrp9","low-density lipoprotein receptor-related protein 10","protein-coding"]
[1832,"chr2",30065903,30067124,"+",0,"NA","promoter-TSS (NM_001204875)","promoter-TSS (NM_001204875)",39,"NM_001204875",56086,"Mm.326055","NM_023871","ENSMUSG00000054766","Set","2610030F17Rik|5730420M11Rik|AA407739|I-2PP2A|StF-IT-1|TAF-I","SET nuclear oncogene","protein-coding"]
[2795,"chr6",87913695,87914831,"+",0,"NA","TTS (NM_017477)","TTS (NM_017477)",287,"NM_173737",232210,"Mm.246241","NM_173737","ENSMUSG00000030060","Hmces","8430410A17Rik|C85376","5-hydroxymethylcytosine (hmC) binding, ES cell specific","protein-coding"]
[2704,"chr5",143403588,143404365,"+",0,"NA","exon (NM_025841, exon 1 of 5)","exon (NM_025841, exon 1 of 5)",156,"NM_025841",66913,"Mm.181880","NM_025841","ENSMUSG00000079111","Kdelr2","1110007A14Rik","KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2","protein-coding"]
[953,"chr13",111686078,111687104,"+",0,"NA","intron (NM_172593, intron 1 of 12)","CpG",413,"NM_172593",218613,"Mm.31012","NM_172593","ENSMUSG00000032727","Mier3","5730509D14|AU015422|D130064H19Rik","mesoderm induction early response 1, family member 3","protein-coding"]
[221,"chr10",43901316,43901956,"+",0,"NA","promoter-TSS (NM_130892)","promoter-TSS (NM_130892)",100,"NM_001081054",76563,"Mm.5904","NM_001081054","ENSMUSG00000019863","Qrsl1","2700038P16Rik|C80053|GatA","glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1","protein-coding"]
[3147,"chr8",47533233,47534190,"+",0,"NA","promoter-TSS (NM_203507)","promoter-TSS (NM_203507)",66,"NM_203507",192174,"Mm.273081","NM_203507","ENSMUSG00000031568","Rwdd4a","BC016198|Gm1942|Rwdd4","RWD domain containing 4A","protein-coding"]
[3176,"chr8",72239848,72240457,"+",0,"NA","promoter-TSS (NM_007456)","promoter-TSS (NM_007456)",20,"NM_007456",11767,"Mm.290086","NM_007456","ENSMUSG00000003033","Ap1m1","AA408894|AP47|Adtm1A|Cltnm|[m]1A|mu1A","adaptor-related protein complex AP-1, mu subunit 1","protein-coding"]
[1424,"chr17",29268725,29269326,"+",0,"NA","intron (NM_030561, intron 1 of 8)","CpG",237,"NM_030561",80748,"Mm.290116","NM_030561","ENSMUSG00000052712","BC004004","2400006G15Rik","cDNA sequence BC004004","protein-coding"]
[1560,"chr18",36280505,36281338,"+",0,"NA","promoter-TSS (NM_008989)","promoter-TSS (NM_008989)",-241,"NM_008989",19290,"Mm.231802","NM_008989",null,"Pura","CAGER-1|Pur-alpha|ssCRE-BP","purine rich element binding protein A","protein-coding"]
[417,"chr11",49250296,49251094,"+",0,"NA","intron (NM_001110150, intron 1 of 2)","CpG",143,"NM_001110150",17308,"Mm.196933","NM_010794","ENSMUSG00000020346","Mgat1","Mgat-1","mannoside acetylglucosaminyltransferase 1","protein-coding"]
[784,"chr12",84569552,84570754,"+",0,"NA","exon (NM_007701, exon 1 of 5)","exon (NM_007701, exon 1 of 5)",325,"NM_001301427",12677,"Mm.4405","NM_007701","ENSMUSG00000021239","Vsx2","Chx10|Hox-10|Hox10|or","visual system homeobox 2","protein-coding"]
[1762,"chr19",56397007,56397671,"+",0,"NA","intron (NM_007611, intron 1 of 6)","CpG",210,"NM_007611",12369,"Mm.35687","NM_007611","ENSMUSG00000025076","Casp7","AI314680|CMH-1|ICE-IAP3|Mch3|caspase-7|mCASP-7","caspase 7","protein-coding"]
[260,"chr10",77621990,77622878,"+",0,"NA","intron (NM_019803, intron 1 of 5)","CpG",113,"NM_019803",22213,"Mm.458125","NM_019803","ENSMUSG00000009293","Ube2g2","1110003O05Rik|D10Xrf369|UBC7|Ubc7p","ubiquitin-conjugating enzyme E2G 2","protein-coding"]
[3080,"chr7",141194686,141195344,"+",0,"NA","promoter-TSS (NM_153777)","promoter-TSS (NM_153777)",-128,"NM_153777",70552,"Mm.45104","NM_153777","ENSMUSG00000038637","Lrrc56","5730427C23Rik|BB110509|mFLJ00101","leucine rich repeat containing 56","protein-coding"]
[2061,"chr2",172549214,172550189,"+",0,"NA","5' UTR (NM_009335, exon 1 of 7)","5' UTR (NM_009335, exon 1 of 7)",108,"NM_009335",21420,"Mm.3629","NM_009335","ENSMUSG00000028640","Tfap2c","AA409384|AP2gamma|Ap-2.2|Stra2|Tcfap2c","transcription factor AP-2, gamma","protein-coding"]
[1844,"chr2",31572266,31573244,"+",0,"NA","5' UTR (NM_001033389, exon 1 of 18)","5' UTR (NM_001033389, exon 1 of 18)",104,"NM_001290548",320267,"Mm.207261","NM_001033389","ENSMUSG00000026843","Fubp3","A330051M14Rik|AV006371|FBP3|Marta2","far upstream element (FUSE) binding protein 3","protein-coding"]
[1530,"chr18",10725373,10726690,"+",0,"NA","5' UTR (NM_144860, exon 1 of 21)","5' UTR (NM_144860, exon 1 of 21)",406,"NM_144860",225164,"Mm.21500","NM_144860","ENSMUSG00000024294","Mib1","DIP-1|E430019M12Rik|Mib|mKIAA1323","mindbomb homolog 1 (Drosophila)","protein-coding"]
[2504,"chr5",32610812,32611873,"+",0,"NA","5' UTR (NM_001205133, exon 1 of 13)","5' UTR (NM_001205133, exon 1 of 13)",171,"NM_009535",22612,"Mm.4558","NM_009535","ENSMUSG00000014932","Yes1","Yes|p61-Yes","Yamaguchi sarcoma viral (v-yes) oncogene homolog 1","protein-coding"]
[762,"chr12",75817951,75819727,"+",0,"NA","intron (NM_001005510, intron 1 of 115)","CpG",521,"NM_001005510",319565,"Mm.26652","NM_001005510","ENSMUSG00000063450","Syne2","6820443O06Rik|AW546258|D12Ertd777e|NUA|Nesp2g|mKIAA1011","spectrin repeat containing, nuclear envelope 2","protein-coding"]
[1144,"chr15",76576174,76576964,"+",0,"NA","intron (NR_073123, intron 1 of 14)","intron (NR_073123, intron 1 of 14)",210,"NR_073123",268822,"Mm.181624","NM_172960","ENSMUSG00000022550","Adck5","A230108P17","aarF domain containing kinase 5","protein-coding"]
[2798,"chr6",88724042,88725246,"+",0,"NA","promoter-TSS (NM_001166250)","promoter-TSS (NM_001166250)",-60,"NM_001166250",23945,"Mm.272197","NM_011844","ENSMUSG00000033174","Mgll","AA589436|Magl|Mgl","monoglyceride lipase","protein-coding"]
[734,"chr12",26469039,26469793,"+",0,"NA","exon (NM_020557, exon 1 of 5)","exon (NM_020557, exon 1 of 5)",201,"NM_020557",22169,"Mm.271839","NM_020557","ENSMUSG00000020638","Cmpk2","1200004E04Rik|TDKI|Tyki","cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial","protein-coding"]
[2952,"chr7",65861585,65863079,"+",0,"NA","exon (NM_011048, exon 1 of 22)","exon (NM_011048, exon 1 of 22)",196,"NM_011048",18553,"Mm.294007","NM_011048","ENSMUSG00000030513","Pcsk6","C86343|Pace4|SPC4","proprotein convertase subtilisin/kexin type 6","protein-coding"]
[1723,"chr19",37550363,37551060,"+",0,"NA","intron (NM_175353, intron 1 of 21)","CpG",293,"NM_175353",107371,"Mm.24865","NM_175353","ENSMUSG00000053799","Exoc6","4833405E05Rik|AW413330|C430002C19|Sec15|Sec15l1|hbd|msec15","exocyst complex component 6","protein-coding"]
[2621,"chr5",121397803,121398851,"+",0,"NA","intron (NM_172722, intron 1 of 23)","CpG",345,"NM_172722",231713,"Mm.33919","NM_172722","ENSMUSG00000042719","Naa25","4833422K13Rik|A630046C11|AI450868|C330023M02Rik|Mdm20","N(alpha)-acetyltransferase 25, NatB auxiliary subunit","protein-coding"]
[2047,"chr2",165992254,165993230,"+",0,"NA","5' UTR (NM_008679, exon 1 of 23)","5' UTR (NM_008679, exon 1 of 23)",105,"NM_008679",17979,"Mm.469663","NM_008679","ENSMUSG00000027678","Ncoa3","2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip","nuclear receptor coactivator 3","protein-coding"]
[144,"chr1",160906040,160906876,"+",0,"NA","promoter-TSS (NM_001024952)","promoter-TSS (NM_001024952)",47,"NM_001024952",381305,"Mm.329667","NM_001024952","ENSMUSG00000040423","Rc3h1","5730557L09Rik|Gm551|N28103|mKIAA2025","RING CCCH (C3H) domains 1","protein-coding"]
[1440,"chr17",34031285,34032213,"+",0,"NA","promoter-TSS (NM_008202)","promoter-TSS (NM_008202)",-59,"NM_008202",14977,"Mm.18556","NM_008202","ENSMUSG00000024327","Slc39a7","AA408174|AI117660|AL024048|H-2Ke4|H2-Ke4|Ke-4|Ke4|Ring5|Zip7","solute carrier family 39 (zinc transporter), member 7","protein-coding"]
[2524,"chr5",38319131,38320242,"+",0,"NA","exon (NM_013503, exon 1 of 1)","exon (NM_013503, exon 1 of 1)",177,"NM_013503",13492,"Mm.167154","NM_013503","ENSMUSG00000039358","Drd5","D5R|Drd-5|Drd1b|Gpcr1","dopamine receptor D5","protein-coding"]
[381,"chr11",5057140,5058678,"+",0,"NA","promoter-TSS (NM_145216)","promoter-TSS (NM_145216)",-219,"NM_145216",75668,"Mm.374836","NM_145216","ENSMUSG00000034209","Rasl10a","2210403B10Rik|AI852688","RAS-like, family 10, member A","protein-coding"]
[1471,"chr17",46297721,46298341,"+",0,"NA","5' UTR (NM_001286013, exon 1 of 6)","5' UTR (NM_001286013, exon 1 of 6)",103,"NM_001286013",106565,"Mm.23633","NM_134120","ENSMUSG00000047428","Dlk2","AI413481|DLK-2|Egfl9","delta-like 2 homolog (Drosophila)","protein-coding"]
[1814,"chr2",26628317,26630016,"+",0,"NA","intron (NM_019833, intron 1 of 4)","intron (NM_019833, intron 1 of 4)",709,"NM_019833",56279,"Mm.279863","NM_019833","ENSMUSG00000036186","Fam69b","AB030186|AW209000|B230317C12Rik|PIP49","family with sequence similarity 69, member B","protein-coding"]
[906,"chr13",55634715,55635531,"+",0,"NA","5' UTR (NM_001282055, exon 1 of 23)","5' UTR (NM_001282055, exon 1 of 23)",124,"NM_001282055",212880,"Mm.202725","NM_145975","ENSMUSG00000021500","Ddx46","2200005K02Rik|8430438J23Rik|AI325430|AI957095|mKIAA0801","DEAD (Asp-Glu-Ala-Asp) box polypeptide 46","protein-coding"]
[2205,"chr3",138741969,138742902,"+",0,"NA","non-coding (NR_121195, exon 1 of 8)","non-coding (NR_121195, exon 1 of 8)",227,"NM_019571",56224,"Mm.31927","NM_019571","ENSMUSG00000028152","Tspan5","2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9","tetraspanin 5","protein-coding"]
[1349,"chr17",3114376,3115888,"+",0,"NA","5' UTR (NM_134123, exon 1 of 20)","5' UTR (NM_134123, exon 1 of 20)",160,"NM_134123",106583,"Mm.124373","NM_134123","ENSMUSG00000046201","Scaf8","A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116","SR-related CTD-associated factor 8","protein-coding"]
[2966,"chr7",80186549,80187331,"+",0,"NA","promoter-TSS (NM_013659)","promoter-TSS (NM_013659)",99,"NM_013659",20352,"Mm.275909","NM_013659","ENSMUSG00000030539","Sema4b","SemC|Semac|mKIAA1745","sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B","protein-coding"]
[177,"chr1",191820901,191822075,"+",0,"NA","promoter-TSS (NM_010892)","promoter-TSS (NM_010892)",15,"NM_010892",18005,"Mm.33773","NM_010892","ENSMUSG00000026622","Nek2","AA617254|C77054","NIMA (never in mitosis gene a)-related expressed kinase 2","protein-coding"]
[3379,"chr9",56950534,56951312,"+",0,"NA","promoter-TSS (NM_178374)","promoter-TSS (NM_178374)",-1,"NM_178374",66069,"Mm.220984","NM_178374","ENSMUSG00000055334","Snupn","0610031A09Rik|Rnut1|Snupn1","snurportin 1","protein-coding"]
[2213,"chr3",145987344,145989031,"+",0,"NA","exon (NM_001166064, exon 1 of 7)","exon (NM_001166064, exon 1 of 7)",317,"NM_001166064",214804,"Mm.268854","NM_001166064","ENSMUSG00000036863","Syde2","C430017H16Rik","synapse defective 1, Rho GTPase, homolog 2 (C. elegans)","protein-coding"]
[373,"chr11",3451654,3452668,"+",0,"NA","promoter-TSS (NR_028317)","promoter-TSS (NR_028317)",-276,"NR_028317",71523,"Mm.72795","NM_027820","ENSMUSG00000034587","8430429K09Rik","-","RIKEN cDNA 8430429K09 gene","ncRNA"]
[2078,"chr2",180966942,180967835,"+",0,"NA","promoter-TSS (NM_001177706)","promoter-TSS (NM_001177706)",88,"NM_001177706",228998,"Mm.33765","NM_145760","ENSMUSG00000027575","Arfgap1","AI115377|Arf1gap","ADP-ribosylation factor GTPase activating protein 1","protein-coding"]
[3346,"chr9",40800639,40801930,"+",0,"NA","promoter-TSS (NM_031165)","promoter-TSS (NM_031165)",11,"NM_031165",15481,"Mm.290774","NM_031165","ENSMUSG00000015656","Hspa8","2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10","heat shock protein 8","protein-coding"]
[773,"chr12",81631089,81632001,"+",0,"NA","exon (NM_001033149, exon 1 of 3)","exon (NM_001033149, exon 1 of 3)",296,"NM_001033149",69480,"Mm.130002","NM_001033149","ENSMUSG00000042734","Ttc9","-","tetratricopeptide repeat domain 9","protein-coding"]
[1247,"chr16",10834920,10835485,"+",0,"NA","exon (NM_001162932, exon 1 of 2)","exon (NM_001162932, exon 1 of 2)",143,"NM_001162932",223970,"Mm.325777","NM_001033278","ENSMUSG00000037991","Rmi2","A630055G03Rik|Gm537|Gm929","RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)","protein-coding"]
[2940,"chr7",47050299,47051269,"+",0,"NA","exon (NM_026436, exon 1 of 3)","exon (NM_026436, exon 1 of 3)",144,"NM_026436",67893,"Mm.27338","NM_026436","ENSMUSG00000010307","Tmem86a","1810054O13Rik|AI414959|AW742698","transmembrane protein 86A","protein-coding"]
[22,"chr1",39535519,39536296,"+",0,"NA","exon (NM_028043, exon 1 of 7)","exon (NM_028043, exon 1 of 7)",105,"NM_028043",52846,"Mm.259421","NM_028043","ENSMUSG00000003135","Cnot11","2410015L18Rik|C40|D1Bwg0212e","CCR4-NOT transcription complex, subunit 11","protein-coding"]
[205,"chr10",34282084,34282968,"+",0,"NA","exon (NM_009433, exon 1 of 1)","exon (NM_009433, exon 1 of 1)",336,"NM_009433",22110,"Mm.20445","NM_009433","ENSMUSG00000047514","Tspyl1","Tspyl","testis-specific protein, Y-encoded-like 1","protein-coding"]
[3072,"chr7",140035938,140037113,"+",0,"NA","promoter-TSS (NM_133755)","promoter-TSS (NM_133755)",134,"NM_027201",69752,"Mm.200818","NM_027201","ENSMUSG00000025470","Zfp511","2410004P19Rik|C86579|Znf511","zinc finger protein 511","protein-coding"]
[1309,"chr16",35155521,35156570,"+",0,"NA","5' UTR (NM_001012765, exon 1 of 21)","5' UTR (NM_001012765, exon 1 of 21)",409,"NM_001012765",224129,"Mm.41137","NM_001012765",null,"Adcy5","AW121902|Ac5","adenylate cyclase 5","protein-coding"]
[1752,"chr19",47579222,47580202,"+",0,"NA","promoter-TSS (NM_001164639)","promoter-TSS (NM_001164639)",-307,"NM_009289",20874,"Mm.281011","NM_009289","ENSMUSG00000025060","Slk","9A2|AV021402|AW411554|Etk4|SMAK|Stk2|mKIAA0204|mSLK","STE20-like kinase","protein-coding"]
[3213,"chr8",91313235,91313895,"+",0,"NA","promoter-TSS (NM_011936)","promoter-TSS (NM_011936)",40,"NM_011936",26383,"Mm.4375","NM_011936","ENSMUSG00000055932","Fto","AW743446|mKIAA1752","fat mass and obesity associated","protein-coding"]
[1576,"chr18",49979028,49979641,"+",0,"NA","promoter-TSS (NM_001177760)","promoter-TSS (NM_001177760)",-93,"NM_001177760",106869,"Mm.27740","NM_134131","ENSMUSG00000062210","Tnfaip8","AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2","tumor necrosis factor, alpha-induced protein 8","protein-coding"]
[3448,"chr9",104001814,104002944,"+",0,"NA","promoter-TSS (NM_028721)","promoter-TSS (NM_028721)",-165,"NM_172460",74025,"Mm.479273","NM_028721","ENSMUSG00000032558","Nphp3","3632410F03Rik|AI550417|C230078J01|D330020E01Rik|pcy","nephronophthisis 3 (adolescent)","protein-coding"]
[3296,"chr8",123065218,123066028,"+",0,"NA","exon (NM_153176, exon 1 of 17)","exon (NM_153176, exon 1 of 17)",115,"NM_153176",234847,"Mm.292075","NM_153176","ENSMUSG00000000738","Spg7","AI452278|AU015315|Cmar|PGN","spastic paraplegia 7 homolog (human)","protein-coding"]
[2874,"chr7",12965387,12966441,"+",0,"NA","promoter-TSS (NM_178732)","promoter-TSS (NM_178732)",50,"NM_178732",243834,"Mm.133086","NM_178732","ENSMUSG00000004500","Zfp324","A930002M05|D430030K24Rik|ZF5128","zinc finger protein 324","protein-coding"]
[2681,"chr5",138170861,138172542,"+",0,"NA","promoter-TSS (NM_021392)","promoter-TSS (NM_021392)",161,"NM_008568",17220,"Mm.378965","NM_008568","ENSMUSG00000029730","Mcm7","AI747533|Mcmd7|mCDC47","minichromosome maintenance deficient 7 (S. cerevisiae)","protein-coding"]
[1622,"chr19",3388573,3389565,"+",0,"NA","promoter-TSS (NM_001286557)","promoter-TSS (NM_001286557)",212,"NM_001039657",17771,"Mm.209941","NM_010841","ENSMUSG00000024905","Mtl5","tesmin","metallothionein-like 5, testis-specific (tesmin)","protein-coding"]
[1260,"chr16",16302808,16303725,"+",0,"NA","exon (NM_198246, exon 1 of 5)","exon (NM_198246, exon 1 of 5)",301,"NM_198246",70120,"Mm.37486","NM_198246","ENSMUSG00000022792","Yars2","2210023C10Rik|tyrRS","tyrosyl-tRNA synthetase 2 (mitochondrial)","protein-coding"]
[874,"chr13",41000854,41001518,"+",0,"NA","5' UTR (NM_026550, exon 1 of 10)","5' UTR (NM_026550, exon 1 of 10)",176,"NM_026550",68083,"Mm.24789","NM_026550","ENSMUSG00000038683","Pak1ip1","5830431I15Rik|5930415H02Rik|AA419825|AI314040|AW556169|Gdpd1|PIP1","PAK1 interacting protein 1","protein-coding"]
[975,"chr14",20674188,20674857,"+",0,"NA","intron (NM_172596, intron 1 of 22)","CpG",201,"NM_001168273",218811,"Mm.173119","NM_172596","ENSMUSG00000039367","Sec24c","2610204K03Rik|mKIAA0079","Sec24 related gene family, member C (S. cerevisiae)","protein-coding"]
[493,"chr11",70237442,70238544,"+",0,"NA","promoter-TSS (NM_026757)","promoter-TSS (NM_026757)",-79,"NM_145758",104457,"Mm.30016","NM_026757","ENSMUSG00000020831","0610010K14Rik","1110020A23Rik|AL033328|AU045833|Bap18","RIKEN cDNA 0610010K14 gene","protein-coding"]
[1708,"chr19",24999101,25000041,"+",0,"NA","promoter-TSS (NM_028785)","promoter-TSS (NM_028785)",42,"NM_028785",76088,"Mm.102485","NM_028785","ENSMUSG00000052085","Dock8","1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977","dedicator of cytokinesis 8","protein-coding"]
[2220,"chr3",152395570,152396987,"+",0,"NA","promoter-TSS (NM_001287139)","promoter-TSS (NM_001287139)",275,"NM_001080755",108946,"Mm.379292","NM_198416","ENSMUSG00000039068","Zzz3","3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514","zinc finger, ZZ domain containing 3","protein-coding"]
[1436,"chr17",33842981,33843652,"+",0,"NA","promoter-TSS (NM_001305169)","promoter-TSS (NM_001305169)",-110,"NM_001305169",54219,"Mm.11175","NM_019421","ENSMUSG00000002308","Cd320","425O18-1|8D6|D17Ertd716e|NG29|TCblR|VLDL","CD320 antigen","protein-coding"]
[1911,"chr2",82053246,82053813,"+",0,"NA","promoter-TSS (NM_175513)","promoter-TSS (NM_175513)",-129,"NM_175513",241514,"Mm.119383","NM_175513","ENSMUSG00000070866","Zfp804a","C630007C17Rik|Znf804a","zinc finger protein 804A","protein-coding"]
[2856,"chr6",140623308,140623928,"+",0,"NA","5' UTR (NM_009637, exon 1 of 9)","5' UTR (NM_009637, exon 1 of 9)",116,"NM_001005605",11569,"Mm.86453","NM_009637","ENSMUSG00000030232","Aebp2","AU023766|B230313N05Rik","AE binding protein 2","protein-coding"]
[2528,"chr5",52189862,52190827,"+",0,"NA","promoter-TSS (NR_015537)","promoter-TSS (NR_015537)",202,"NR_104311",13204,"Mm.993","NM_007839","ENSMUSG00000029169","Dhx15","DBP1|DEAH9|Ddx15|HRH2|mDEAH9","DEAH (Asp-Glu-Ala-His) box polypeptide 15","protein-coding"]
[1591,"chr18",62977678,62978371,"+",0,"NA","exon (NM_028017, exon 1 of 12)","exon (NM_028017, exon 1 of 12)",108,"NM_028017",108123,"Mm.292687","NM_028017","ENSMUSG00000024581","Napg","2400003O04Rik|SNARE","N-ethylmaleimide sensitive fusion protein attachment protein gamma","protein-coding"]
[1677,"chr19",7557271,7557792,"+",0,"NA","promoter-TSS (NM_139269)","promoter-TSS (NM_139269)",72,"NM_139269",225845,"Mm.274810","NM_139269","ENSMUSG00000060675","Pla2g16","C78643|HRSL3|Hrasls3|Hrev107|MLP-3","phospholipase A2, group XVI","protein-coding"]
[2199,"chr3",134828783,134829593,"+",0,"NA","5' UTR (NM_021382, exon 1 of 5)","5' UTR (NM_021382, exon 1 of 5)",181,"NM_021382",21338,"Mm.103810","NM_021382","ENSMUSG00000028172","Tacr3","Nk3r|Nkr|Tac3r","tachykinin receptor 3","protein-coding"]
[2174,"chr3",104638021,104639279,"+",0,"NA","promoter-TSS (NM_009196)","promoter-TSS (NM_009196)",-14,"NM_009196",20501,"Mm.9086","NM_009196","ENSMUSG00000032902","Slc16a1","AL022710|Mct1","solute carrier family 16 (monocarboxylic acid transporters), member 1","protein-coding"]
[1320,"chr16",44557720,44558882,"+",0,"NA","promoter-TSS (NR_037242)","promoter-TSS (NR_037242)",-172,"NR_037242",100526478,null,"NR_037242","ENSMUSG00000093046","Mir3081","mir-3081|mmu-mir-3081","microRNA 3081","ncRNA"]
[1026,"chr14",55072620,55073442,"+",0,"NA","promoter-TSS (NR_004444)","promoter-TSS (NR_004444)",-60,"NR_004444",432855,"Mm.490799","NR_004444","ENSMUSG00000093452","Zfhx2os","Zfhx2as","zinc finger homeobox 2, opposite strand","ncRNA"]
[3002,"chr7",101450369,101451239,"+",0,"NA","promoter-TSS (NM_001243757)","promoter-TSS (NM_001243757)",284,"NM_001243758",207728,"Mm.247564","NM_001008548","ENSMUSG00000030653","Pde2a","CGS-PDE|cGSPDE","phosphodiesterase 2A, cGMP-stimulated","protein-coding"]
[2752,"chr6",48537231,48538128,"+",0,"NA","promoter-TSS (NR_130985)","promoter-TSS (NR_130985)",110,"NM_133764",76252,"Mm.30214","NM_133764","ENSMUSG00000039347","Atp6v0e2","0610006O14Rik|NM9.2","ATPase, H+ transporting, lysosomal V0 subunit E2","protein-coding"]
[1390,"chr17",25184285,25185277,"+",0,"NA","exon (NM_183150, exon 2 of 2)","exon (NM_183150, exon 2 of 2)",220,"NM_183150",214489,"Mm.274433","NM_183150","ENSMUSG00000067722","BC003965","Ccsmst1","cDNA sequence BC003965","protein-coding"]
[3113,"chr8",12756743,12757500,"+",0,"NA","non-coding (NR_121603, exon 1 of 30)","non-coding (NR_121603, exon 1 of 30)",105,"NM_001293667",50770,"Mm.257837","NM_015804","ENSMUSG00000031441","Atp11a","4930558F19Rik|AU040868|Atpc1h|Ih","ATPase, class VI, type 11A","protein-coding"]
[1993,"chr2",148680757,148681986,"+",0,"NA","intron (NM_028986, intron 1 of 5)","CpG",251,"NM_028986",74533,"Mm.136913","NM_028986","ENSMUSG00000027439","Gzf1","8430437G08Rik|Zfp336|mGZF1","GDNF-inducible zinc finger protein 1","protein-coding"]
[1893,"chr2",71211568,71212356,"+",0,"NA","promoter-TSS (NM_001198878)","promoter-TSS (NM_001198878)",16,"NM_010064",13427,"Mm.249479","NM_010064","ENSMUSG00000027012","Dync1i2","3110079H08Rik|AW554389|Dncic2","dynein cytoplasmic 1 intermediate chain 2","protein-coding"]
[1469,"chr17",46202338,46203419,"+",0,"NA","promoter-TSS (NM_030715)","promoter-TSS (NM_030715)",23,"NM_028198",72322,"Mm.275039","NM_028198","ENSMUSG00000067150","Xpo5","2410004H11Rik|2700038C24Rik|AI648907|AW549301|Exp5|RanBp21|mKIAA1291","exportin 5","protein-coding"]
[1499,"chr17",69156660,69157756,"+",0,"NA","intron (NM_013813, intron 1 of 21)","CpG",398,"NM_013813",13823,"Mm.131135","NM_013813","ENSMUSG00000024044","Epb41l3","4.1B|DAL1P|Dal1|Epb4.1l3|NBL3","erythrocyte membrane protein band 4.1 like 3","protein-coding"]
[1646,"chr19",5601741,5602853,"+",0,"NA","TTS (NM_178637)","TTS (NM_178637)",424,"NM_026616",68209,"Mm.246200","NM_026616",null,"Rnaseh2c","1500026D16Rik|AYP1","ribonuclease H2, subunit C","protein-coding"]
[3010,"chr7",109703255,109704270,"+",0,"NA","promoter-TSS (NM_020616)","promoter-TSS (NM_020616)",25,"NM_020616",57373,"Mm.334138","NM_020616","ENSMUSG00000031023","Akip1","BCA3|C11orf17|D7H11orf17|D930014E17Rik|ICRFP703B1614Q5.6|ORF27","A kinase (PRKA) interacting protein 1","protein-coding"]
[400,"chr11",23665396,23666548,"+",0,"NA","promoter-TSS (NM_023651)","promoter-TSS (NM_023651)",-4,"NM_028304",74467,"Mm.29536","NM_028304","ENSMUSG00000020280","Pus10","2810013G11Rik|4933435A13Rik|AU014648|C77560|Ccdc139","pseudouridylate synthase 10","protein-coding"]
[534,"chr11",78032011,78032974,"+",0,"NA","exon (NM_183286, exon 1 of 5)","exon (NM_183286, exon 1 of 5)",179,"NM_183286",70451,"Mm.390342","NM_183286","ENSMUSG00000020834","Dhrs13","2610209N15Rik","dehydrogenase/reductase (SDR family) member 13","protein-coding"]
[746,"chr12",59130804,59131553,"+",0,"NA","promoter-TSS (NM_001165253)","promoter-TSS (NM_001165253)",-275,"NM_001165253",217615,"Mm.244118","NM_146034","ENSMUSG00000021000","Ctage5","D12Bwg0579e|Mea6|Mgea|Mgea6","CTAGE family, member 5","protein-coding"]
[919,"chr13",72627998,72629538,"+",0,"NA","promoter-TSS (NM_010574)","promoter-TSS (NM_010574)",-204,"NR_030701",328287,"Mm.235072","NR_030701",null,"Gm20554","D430050G20","predicted gene, 20554","ncRNA"]
[744,"chr12",44268857,44269564,"+",0,"NA","promoter-TSS (NM_026164)","promoter-TSS (NM_026164)",56,"NM_026164",67452,"Mm.54126","NM_026164",null,"Pnpla8","1200006O19Rik|AI467579|Ipla2(gamma)","patatin-like phospholipase domain containing 8","protein-coding"]
[1268,"chr16",17527937,17528656,"+",0,"NA","exon (NM_026909, exon 5 of 5)","exon (NM_026909, exon 5 of 5)",2756,"NM_026909",69009,"Mm.10174","NM_026909","ENSMUSG00000022760","Thap7","1810004B07Rik","THAP domain containing 7","protein-coding"]
[633,"chr11",103358657,103359646,"+",0,"NA","TTS (NM_183288)","TTS (NM_183288)",4541,"NM_183288",544817,"Mm.259113","NM_133715","ENSMUSG00000034255","Arhgap27","2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20","Rho GTPase activating protein 27","protein-coding"]
[1372,"chr17",24351567,24352727,"+",0,"NA","5' UTR (NM_013855, exon 1 of 33)","5' UTR (NM_013855, exon 1 of 33)",124,"NM_001039581",27410,"Mm.239470","NM_013855","ENSMUSG00000024130","Abca3","1810036E22Rik|ABC-C|Abc3","ATP-binding cassette, sub-family A (ABC1), member 3","protein-coding"]
[151,"chr1",171411132,171411937,"+",0,"NA","promoter-TSS (NM_009480)","promoter-TSS (NM_009480)",-147,"NM_009480",22278,"Mm.8","NM_009480","ENSMUSG00000026641","Usf1","bHLHb11","upstream transcription factor 1","protein-coding"]
[1977,"chr2",130563316,130564127,"+",0,"NA","promoter-TSS (NR_040348)","promoter-TSS (NR_040348)",28,"NR_040348",321014,"Mm.442588","NR_040348","ENSMUSG00000060029","4930473A02Rik","-","RIKEN cDNA 4930473A02 gene","ncRNA"]
[2023,"chr2",158375481,158376436,"+",0,"NA","intron (NM_175692, intron 1 of 4)","intron (NM_175692, intron 1 of 4)",320,"NM_175692",319317,"Mm.294494","NM_175692","ENSMUSG00000044349","Snhg11","A930034L06Rik|AI854265|AL022637|AW319638|E130013N09Rik","small nucleolar RNA host gene 11","protein-coding"]
[3445,"chr9",103007614,103008916,"+",0,"NA","promoter-TSS (NM_033314)","promoter-TSS (NM_033314)",-224,"NM_033314",24059,"Mm.207106","NM_033314",null,"Slco2a1","2310021C19Rik|Pgt|Slc21a2|mPgt","solute carrier organic anion transporter family, member 2a1","protein-coding"]
[1669,"chr19",6941118,6942751,"+",0,"NA","promoter-TSS (NM_007522)","promoter-TSS (NM_007522)",73,"NM_007522",12015,"Mm.4387","NM_007522","ENSMUSG00000024959","Bad","AI325008|Bbc2","BCL2-associated agonist of cell death","protein-coding"]
[1825,"chr2",28839676,28841028,"+",0,"NA","promoter-TSS (NM_001166033)","promoter-TSS (NM_001166033)",8,"NM_172977",269252,"Mm.26043","NM_172977","ENSMUSG00000035666","Gtf3c4","5330400C03|AI426938|AU014771|AU017413|KAT12|TFIIIC90","general transcription factor IIIC, polypeptide 4","protein-coding"]
[1285,"chr16",20603940,20605229,"+",0,"NA","TTS (NR_035407)","TTS (NR_035407)",132,"NR_035407",100316739,null,"NR_035407","ENSMUSG00000080669","Mir1224","Mirn1224|mir-1224|mmu-mir-1224","microRNA 1224","ncRNA"]
[1952,"chr2",121170686,121171677,"+",0,"NA","promoter-TSS (NM_153387)","promoter-TSS (NM_153387)",13,"NM_001290824",51885,"Mm.383499","NM_153387","ENSMUSG00000027263","Tubgcp4","4932441P04Rik|76p|D2Ertd435e|GCP-4","tubulin, gamma complex associated protein 4","protein-coding"]
[287,"chr10",80264634,80265264,"+",0,"NA","promoter-TSS (NM_133188)","promoter-TSS (NM_133188)",-42,"NM_001122604",70248,"Mm.148693","NM_133188","ENSMUSG00000069565","Dazap1","2410042M16Rik|mPrrp","DAZ associated protein 1","protein-coding"]
[3309,"chr8",125053677,125054852,"+",0,"NA","promoter-TSS (NM_174854)","promoter-TSS (NM_174854)",69,"NM_174854",244667,"Mm.233504","NM_170596","ENSMUSG00000043051","Disc1","-","disrupted in schizophrenia 1","protein-coding"]
[475,"chr11",67052302,67053045,"+",0,"NA","promoter-TSS (NM_001040026)","promoter-TSS (NM_001040026)",3,"NM_001040026",52892,"Mm.129731","NM_001040026",null,"Sco1","2610001C07Rik|D11Bwg1310e","SCO cytochrome oxidase deficient homolog 1 (yeast)","protein-coding"]
[2595,"chr5",114362772,114363832,"+",0,"NA","TTS (NM_001159941)","TTS (NM_001159941)",17203,"NM_001159941",330171,"Mm.238285","NM_026145","ENSMUSG00000001098","Kctd10","AW536343|C87062|mBACURD3","potassium channel tetramerisation domain containing 10","protein-coding"]
[932,"chr13",77135018,77135822,"+",0,"NA","promoter-TSS (NM_134071)","promoter-TSS (NM_134071)",48,"NM_134071",105377,"Mm.209730","NM_134071","ENSMUSG00000021597","Slf1","2700017A04Rik|AW545819|Ankrd32|Brctd1|Brctx|C730024G01Rik","SMC5-SMC6 complex localization factor 1","protein-coding"]
[1549,"chr18",32067521,32068318,"+",0,"NA","5' UTR (NM_173441, exon 1 of 14)","5' UTR (NM_173441, exon 1 of 14)",185,"NM_173441",73473,"Mm.66853","NM_173441","ENSMUSG00000024384","Iws1","1700069O15Rik|3000008H23|AL117927|AW214353","IWS1 homolog (S. cerevisiae)","protein-coding"]
[1959,"chr2",126151889,126152508,"+",0,"NA","promoter-TSS (NM_026981)","promoter-TSS (NM_026981)",57,"NM_026981",69185,"Mm.29019","NM_026981","ENSMUSG00000023330","Dtwd1","1810033A06Rik","DTW domain containing 1","protein-coding"]
[515,"chr11",75486614,75487285,"+",0,"NA","5' UTR (NM_138659, exon 1 of 42)","5' UTR (NM_138659, exon 1 of 42)",172,"NM_138659",192159,"Mm.3757","NM_138659","ENSMUSG00000020850","Prpf8","AU019467|D11Bwg0410e|DBF3/PRP8|Prp8|Sfprp8l","pre-mRNA processing factor 8","protein-coding"]
[1525,"chr18",4352790,4353672,"+",0,"NA","promoter-TSS (NM_007746)","promoter-TSS (NM_007746)",-278,"NM_007746",26410,"Mm.3275","NM_007746","ENSMUSG00000024235","Map3k8","Cot|Cot/Tpl2|Est|Estf|Tpl-2|Tpl2|c-COT","mitogen-activated protein kinase kinase kinase 8","protein-coding"]
[2545,"chr5",73406022,73406723,"+",0,"NA","exon (NM_181323, exon 1 of 16)","exon (NM_181323, exon 1 of 16)",294,"NM_181323",231293,"Mm.280211","NM_181323","ENSMUSG00000029154","Cwh43","C130090K23Rik|imds-60","cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)","protein-coding"]
[1242,"chr16",5233442,5234087,"+",0,"NA","exon (NM_145362, exon 1 of 13)","exon (NM_145362, exon 1 of 13)",143,"NM_145362",208211,"Mm.34581","NM_145362","ENSMUSG00000039427","Alg1","HMAT1|HMT1","asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase)","protein-coding"]
[2761,"chr6",54039738,54040563,"+",0,"NA","exon (NM_001163640, exon 1 of 13)","exon (NM_001163640, exon 1 of 13)",218,"NM_001163640",69993,"Mm.321147","NM_023543","ENSMUSG00000004633","Chn2","1700026N20Rik|4930557O16Rik|ARHGAP3|Bch","chimerin 2","protein-coding"]
[2996,"chr7",100159110,100159897,"+",0,"NA","exon (NM_026010, exon 1 of 2)","exon (NM_026010, exon 1 of 2)",226,"NM_026010",67164,"Mm.46777","NM_026010",null,"Lipt2","2610209A20Rik","lipoyl(octanoyl) transferase 2 (putative)","protein-coding"]
[138,"chr1",156035537,156036029,"+",0,"NA","promoter-TSS (NM_001160182)","promoter-TSS (NM_001160182)",56,"NM_001160180",240832,"Mm.253335","NM_022329","ENSMUSG00000050565","Tor1aip2","1110020D10Rik|15kDa|A130072J07|AA103493|AW060462|AW610675|C77739|Ifrg15|Lull1","torsin A interacting protein 2","protein-coding"]
[1107,"chr15",44619347,44619948,"+",0,"NA","promoter-TSS (NM_019480)","promoter-TSS (NM_019480)",6,"NM_019480",55960,"Mm.287896","NM_019480","ENSMUSG00000022339","Ebag9","AI835379|Rcas1","estrogen receptor-binding fragment-associated gene 9","protein-coding"]
[1208,"chr15",98567137,98568266,"+",0,"NA","promoter-TSS (NM_009833)","promoter-TSS (NM_009833)",-65,"NM_009833",12455,"Mm.29941","NM_009833","ENSMUSG00000011960","Ccnt1","2810478G24Rik|AI115585|CycT1","cyclin T1","protein-coding"]
[1874,"chr2",38511421,38512472,"+",0,"NA","promoter-TSS (NM_001159631)","promoter-TSS (NM_001159631)",70,"NM_001159631",59126,"Mm.143818","NM_021606","ENSMUSG00000026749","Nek6","1300007C09Rik","NIMA (never in mitosis gene a)-related expressed kinase 6","protein-coding"]
[3499,"chr9",120577072,120577701,"+",0,"NA","promoter-TSS (NR_073359)","promoter-TSS (NR_073359)",55,"NR_073359",76100,"Mm.48212","NR_073359","ENSMUSG00000052658","5830454E08Rik","-","RIKEN cDNA 5830454E08 gene","ncRNA"]
[1803,"chr2",25428436,25429182,"+",0,"NA","exon (NM_007379, exon 1 of 48)","exon (NM_007379, exon 1 of 48)",135,"NM_007379",11305,"Mm.2210","NM_007379","ENSMUSG00000026944","Abca2","AI413825|Abc2|D2H0S1474E|mKIAA1062","ATP-binding cassette, sub-family A (ABC1), member 2","protein-coding"]
[724,"chr12",8771352,8773236,"+",0,"NA","intron (NM_011519, intron 1 of 4)","CpG",898,"NM_011519",20969,"Mm.2580","NM_011519","ENSMUSG00000020592","Sdc1","AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1","syndecan 1","protein-coding"]
[1201,"chr15",89499820,89500850,"+",0,"NA","exon (NM_021423, exon 2 of 22)","exon (NM_021423, exon 2 of 22)",478,"NM_021423",58234,"Mm.146855","NM_021423","ENSMUSG00000022623","Shank3","AI841104|SHANK3c-3|SHANK3c-4|Shank3b","SH3/ankyrin domain gene 3","protein-coding"]
[519,"chr11",75630648,75631341,"+",0,"NA","promoter-TSS (NM_008916)","promoter-TSS (NM_008916)",-26,"NM_008916",19062,"Mm.1458","NM_008916","ENSMUSG00000006127","Inpp5k","C62|Pps|SKIP","inositol polyphosphate 5-phosphatase K","protein-coding"]
[1195,"chr15",88861640,88862688,"+",0,"NA","promoter-TSS (NM_145478)","promoter-TSS (NM_145478)",-30,"NM_145478",223775,"Mm.400129","NM_145478","ENSMUSG00000035828","Pim3","BC026639|Kid1","proviral integration site 3","protein-coding"]
[3300,"chr8",123332492,123333222,"+",0,"NA","exon (NM_172287, exon 1 of 15)","exon (NM_172287, exon 1 of 15)",144,"NM_172287",234857,"Mm.150200","NM_172287","ENSMUSG00000010154","Spire2","BC026502|Spir-2|Spir2","spire homolog 2 (Drosophila)","protein-coding"]
[17,"chr1",36761493,36762280,"+",0,"NA","promoter-TSS (NM_009539)","promoter-TSS (NM_009539)",88,"NM_009539",22637,"Mm.8038","NM_009539","ENSMUSG00000026117","Zap70","Srk|ZAP-70|mrtle|mur","zeta-chain (TCR) associated protein kinase","protein-coding"]
[2451,"chr4",155468987,155470350,"+",0,"NA","intron (NM_027161, intron 3 of 4)","intron (NM_027161, intron 3 of 4)",554,"NM_027161",69671,"Mm.45401","NM_027161","ENSMUSG00000023153","Tmem52","2310043I08Rik","transmembrane protein 52","protein-coding"]
[1327,"chr16",64851232,64852242,"+",0,"NA","promoter-TSS (NM_178647)","promoter-TSS (NM_178647)",-348,"NM_178647",106143,"Mm.10160","NM_178647","ENSMUSG00000054604","Cggbp1","AA960172|AL023996|AW045841","CGG triplet repeat binding protein 1","protein-coding"]
[3337,"chr9",30426881,30427511,"+",0,"NA","promoter-TSS (NM_028874)","promoter-TSS (NM_028874)",-133,"NM_028874",102607,"Mm.35084","NM_028874","ENSMUSG00000031993","Snx19","3526401K03Rik|AI195321|AI848208|mKIAA0254","sorting nexin 19","protein-coding"]
[2192,"chr3",123266962,123268184,"+",0,"NA","promoter-TSS (NM_027135)","promoter-TSS (NM_027135)",77,"NM_027135",69608,"Mm.29293","NM_027135","ENSMUSG00000039234","Sec24d","2310020L09Rik|Gm1349","Sec24 related gene family, member D (S. cerevisiae)","protein-coding"]
[1274,"chr16",18248001,18249456,"+",0,"NA","promoter-TSS (NM_001080999)","promoter-TSS (NM_001080999)",-34,"NM_011239",19385,"Mm.235287","NM_011239",null,"Ranbp1","Htf9a","RAN binding protein 1","protein-coding"]
[2667,"chr5",135688471,135689256,"+",0,"NA","promoter-TSS (NM_008898)","promoter-TSS (NM_008898)",-282,"NM_008898",18984,"Mm.3863","NM_008898","ENSMUSG00000005514","Por","4933424M13Rik|CPR|CYPOR|P450R","P450 (cytochrome) oxidoreductase","protein-coding"]
[110,"chr1",132007263,132007935,"+",0,"NA","promoter-TSS (NM_007923)","promoter-TSS (NM_007923)",-6,"NM_007923",13714,"Mm.254233","NM_007923","ENSMUSG00000026436","Elk4","2310011G17Rik|A130026I01Rik|BB162516|SAP-1|Sap1","ELK4, member of ETS oncogene family","protein-coding"]
[333,"chr10",95515032,95515958,"+",0,"NA","intron (NM_080560, intron 1 of 3)","CpG",333,"NM_080560",93765,"Mm.371667","NM_080560","ENSMUSG00000074781","Ube2n","1500026J17Rik|AL022654|BB101821|UBC13","ubiquitin-conjugating enzyme E2N","protein-coding"]
[1995,"chr2",151701787,151702627,"+",0,"NA","5' UTR (NM_001160363, exon 1 of 2)","5' UTR (NM_001160363, exon 1 of 2)",199,"NM_001160363",108832,"Mm.103494","NM_001160363","ENSMUSG00000044364","Tmem74b","5430405G05Rik","transmembrane protein 74B","protein-coding"]
[2356,"chr4",128727289,128728294,"+",0,"NA","5' UTR (NM_001195083, exon 1 of 7)","5' UTR (NM_001195083, exon 1 of 7)",220,"NM_001195083",54383,"Mm.473738","NM_018774","ENSMUSG00000028796","Phc2","A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36","polyhomeotic-like 2 (Drosophila)","protein-coding"]
[2210,"chr3",145758438,145759431,"+",0,"NA","exon (NM_026993, exon 1 of 6)","exon (NM_026993, exon 1 of 6)",242,"NM_026993",69219,"Mm.234247","NM_026993","ENSMUSG00000028194","Ddah1","2410006N07Rik|2510015N06Rik|AI987801|AW050362","dimethylarginine dimethylaminohydrolase 1","protein-coding"]
[2658,"chr5",130222080,130222862,"+",0,"NA","5' UTR (NM_027854, exon 1 of 7)","5' UTR (NM_027854, exon 1 of 7)",136,"NM_027854",71667,"Mm.258508","NM_027854","ENSMUSG00000053094","Tmem248","0610007L01Rik|A930023A16Rik|AW557951|G430067H08Rik","transmembrane protein 248","protein-coding"]
[2780,"chr6",83115345,83116306,"+",0,"NA","exon (NM_020619, exon 1 of 4)","exon (NM_020619, exon 1 of 4)",319,"NM_020619",57377,"Mm.28188","NM_020619","ENSMUSG00000030036","Mogs","1810017N02Rik|AI181835|Gcs1","mannosyl-oligosaccharide glucosidase","protein-coding"]
[646,"chr11",106788116,106789538,"+",0,"NA","promoter-TSS (NM_007840)","promoter-TSS (NM_007840)",-333,"NM_007840",13207,"Mm.491096","NM_007840","ENSMUSG00000020719","Ddx5","2600009A06Rik|G17P1|HUMP68|Hlr1|p68","DEAD (Asp-Glu-Ala-Asp) box polypeptide 5","protein-coding"]
[446,"chr11",57801384,57802122,"+",0,"NA","promoter-TSS (NR_131042)","promoter-TSS (NR_131042)",116,"NM_001081168",50724,"Mm.340083","NM_001081168",null,"Sap30l","2310079P12Rik|AF006998|L55","SAP30-like","protein-coding"]
[2181,"chr3",108383471,108384199,"+",0,"NA","promoter-TSS (NM_001190161)","promoter-TSS (NM_001190161)",-3,"NM_019976",56742,"Mm.389499","NM_019976","ENSMUSG00000068744","Psrc1","5430413I02Rik|AL033312|Dda3","proline/serine-rich coiled-coil 1","protein-coding"]
[2229,"chr4",9844215,9844798,"+",0,"NA","exon (NM_013526, exon 1 of 2)","exon (NM_013526, exon 1 of 2)",134,"NM_013526",242316,"Mm.302555","NM_013526","ENSMUSG00000051279","Gdf6","BMP-13|BMP13|GDF16","growth differentiation factor 6","protein-coding"]
[1220,"chr15",100615285,100616879,"+",0,"NA","promoter-TSS (NR_045701)","promoter-TSS (NR_045701)",420,"NM_011873",23994,"Mm.486175","NM_011873","ENSMUSG00000000346","Dazap2","AI314727|Brbp|Gcap28|Prtb|gt6-12|mKIAA0058","DAZ associated protein 2","protein-coding"]
[1582,"chr18",57877975,57879718,"+",0,"NA","exon (NM_009194, exon 1 of 27)","exon (NM_009194, exon 1 of 27)",168,"NM_009194",20496,"Mm.399997","NM_009194","ENSMUSG00000024597","Slc12a2","9330166H04Rik|Nkcc1|mBSC2|sy-ns","solute carrier family 12, member 2","protein-coding"]
[2842,"chr6",122819719,122820819,"+",0,"NA","promoter-TSS (NM_021899)","promoter-TSS (NM_021899)",85,"NM_021899",60611,"Mm.87142","NM_021899","ENSMUSG00000003154","Foxj2","Fhx","forkhead box J2","protein-coding"]
[1599,"chr18",67464693,67465439,"+",0,"NA","intron (NM_144867, intron 1 of 6)","CpG",217,"NM_144867",225655,"Mm.221420","NM_144867","ENSMUSG00000024530","Slmo1","A230074A19Rik|BC019561","slowmo homolog 1 (Drosophila)","protein-coding"]
[3013,"chr7",110221512,110222326,"+",0,"NA","intron (NM_009302, intron 1 of 11)","CpG",216,"NM_009302",20947,"Mm.334144","NM_009302","ENSMUSG00000031015","Swap70","70kDa|AV235546","SWA-70 protein","protein-coding"]
[2306,"chr4",103113901,103114910,"+",0,"NA","promoter-TSS (NM_146254)","promoter-TSS (NM_146254)",15,"NM_001286222",71148,"Mm.288721","NM_027696","ENSMUSG00000028522","Mier1","4933425I22Rik|5830411K19Rik|er1","mesoderm induction early response 1 homolog (Xenopus laevis","protein-coding"]
[1149,"chr15",76948339,76949210,"+",0,"NA","5' UTR (NM_054099, exon 1 of 4)","5' UTR (NM_054099, exon 1 of 4)",230,"NM_054099",117171,"Mm.322968","NM_054099",null,"1110038F14Rik","-","RIKEN cDNA 1110038F14 gene","protein-coding"]
[2900,"chr7",28267749,28268558,"+",0,"NA","exon (NM_198425, exon 1 of 1)","exon (NM_198425, exon 1 of 1)",272,"NM_198425",386655,"Mm.258201","NM_198425","ENSMUSG00000046058","Eid2","Cri2|EID-2","EP300 interacting inhibitor of differentiation 2","protein-coding"]
[2652,"chr5",129500739,129501643,"+",0,"NA","promoter-TSS (NM_172276)","promoter-TSS (NM_172276)",-40,"NM_172276",231769,"Mm.288714","NM_172276","ENSMUSG00000029439","Sfswap","1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8","splicing factor, suppressor of white-apricot homolog (Drosophila)","protein-coding"]
[2337,"chr4",124802029,124803087,"+",0,"NA","promoter-TSS (NM_008636)","promoter-TSS (NM_008636)",9,"NM_008636",17764,"Mm.272397","NM_008636","ENSMUSG00000028890","Mtf1","MTF-1|Thyls","metal response element binding transcription factor 1","protein-coding"]
[2603,"chr5",115279562,115280335,"+",0,"NA","intron (NM_026504, intron 1 of 6)","intron (NM_026504, intron 1 of 6)",246,"NM_026504",52064,"Mm.290142","NM_026504","ENSMUSG00000041733","Coq5","1810014G04Rik|D5Ertd33e","coenzyme Q5 homolog, methyltransferase (yeast)","protein-coding"]
[2283,"chr4",59626202,59626834,"+",0,"NA","intron (NM_001015681, intron 1 of 3)","CpG",307,"NM_153158",230259,"Mm.45688","NM_153158","ENSMUSG00000045071","E130308A19Rik","-","RIKEN cDNA E130308A19 gene","protein-coding"]
[2243,"chr4",32656915,32657557,"+",0,"NA","5' UTR (NM_001081392, exon 1 of 102)","5' UTR (NM_001081392, exon 1 of 102)",117,"NM_001081392",100019,"Mm.24627","NM_133874","ENSMUSG00000058006","Mdn1","4833432B22Rik|A130070M06|AA958993|D4Abb1e|Gm135","midasin homolog (yeast)","protein-coding"]
[2407,"chr4",139380153,139380877,"+",0,"NA","promoter-TSS (NM_001160319)","promoter-TSS (NM_001160319)",-144,"NM_001160319",69116,"Mm.271956","NM_001160319","ENSMUSG00000066036","Ubr4","1810009A16Rik|A930005E13Rik|D930005K06Rik|Gm1032|Gm1666|N28143|RBAF600|Zubr1|mKIAA0462|p600","ubiquitin protein ligase E3 component n-recognin 4","protein-coding"]
[2695,"chr5",140419212,140420049,"+",0,"NA","exon (NM_133916, exon 1 of 19)","exon (NM_133916, exon 1 of 19)",325,"NM_133916",27979,"Mm.21671","NM_133916","ENSMUSG00000056076","Eif3b","AL033316|AL033334|AL033369|AW208965|D5Wsu45e|EIF3-ETA|EIF3-P110|EIF3-P116|Eif3s9|PRT1","eukaryotic translation initiation factor 3, subunit B","protein-coding"]
[1087,"chr15",10485570,10486377,"+",0,"NA","promoter-TSS (NM_001289447)","promoter-TSS (NM_001289447)",-36,"NM_026396",67832,"Mm.28057","NM_026396","ENSMUSG00000022247","Brix1","1110064N10Rik|Bxdc2|C76935","BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)","protein-coding"]
[1288,"chr16",21794193,21794825,"+",0,"NA","intron (NR_037957, intron 1 of 4)","CpG",162,"NR_037957",100043489,"Mm.326535","NR_037957","ENSMUSG00000097290","1300002E11Rik","1500026P21Rik","RIKEN cDNA 1300002E11 gene","ncRNA"]
[810,"chr12",103979999,103980593,"+",0,"NA","TTS (NM_001166350)","TTS (NM_001166350)",9647,"NM_199314",380780,"Mm.201338","NM_199314","ENSMUSG00000063232","Serpina11","Gm895","serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11","protein-coding"]
[1238,"chr16",4726069,4726979,"+",0,"NA","intron (NM_001136066, intron 1 of 5)","CpG",163,"NM_001136066",15369,"Mm.272866","NM_010443","ENSMUSG00000004070","Hmox2","HO-2|HO2","heme oxygenase 2","protein-coding"]
[33,"chr1",55236984,55238112,"+",0,"NA","exon (NM_175439, exon 1 of 1)","exon (NM_175439, exon 1 of 1)",371,"NM_175439",212679,"Mm.19223","NM_175439",null,"Mars2","C730026E21Rik|MetRS","methionine-tRNA synthetase 2 (mitochondrial)","protein-coding"]
[1587,"chr18",61555103,61555882,"+",0,"NA","promoter-TSS (NM_146087)","promoter-TSS (NM_146087)",-90,"NM_146087",93687,"Mm.26908","NM_146087","ENSMUSG00000024576","Csnk1a1","2610208K14Rik|4632404G05Rik|5430427P18Rik|CK1a|Csnk1a","casein kinase 1, alpha 1","protein-coding"]
[2866,"chr7",3617232,3617814,"+",0,"NA","intron (NM_025348, intron 1 of 3)","CpG",150,"NM_025348",66091,"Mm.17851","NM_025348","ENSMUSG00000035674","Ndufa3","1010001M12Rik|1700022J01Rik","NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3","protein-coding"]
[1559,"chr18",35829504,35830909,"+",0,"NA","intron (NM_133687, intron 1 of 2)","CpG",388,"NM_133687",67393,"Mm.94560","NM_133687","ENSMUSG00000046668","Cxxc5","4930415K17Rik","CXXC finger 5","protein-coding"]
[7,"chr1",9798106,9798673,"+",0,"NA","intron (NM_177547, intron 1 of 16)","CpG",259,"NM_177547",170755,"Mm.336410","NM_133220",null,"Sgk3","2510015P22Rik|A330005P07Rik|Cisk|fy|fz","serum/glucocorticoid regulated kinase 3","protein-coding"]
[1793,"chr2",25054226,25054958,"+",0,"NA","TTS (NM_146251)","TTS (NM_146251)",213,"NM_001177655",56876,"Mm.42956","NM_020276","ENSMUSG00000006476","Nsmf","Jacob|Nelf","NMDA receptor synaptonuclear signaling and neuronal migration factor","protein-coding"]
[227,"chr10",54075034,54076289,"+",0,"NA","promoter-TSS (NR_038016)","promoter-TSS (NR_038016)",135,"NM_008548",17155,"Mm.117294","NM_008548","ENSMUSG00000003746","Man1a","Man1a1|PCR1","mannosidase 1, alpha","protein-coding"]
[1701,"chr19",21272078,21273204,"+",0,"NA","5' UTR (NM_009551, exon 1 of 6)","5' UTR (NM_009551, exon 1 of 6)",363,"NM_009551",22682,"Mm.292405","NM_009551",null,"Zfand5","2310057A04Rik|5830475F03Rik|AA415485|Za20d2|Zfp216","zinc finger, AN1-type domain 5","protein-coding"]
[1860,"chr2",32775209,32776102,"+",0,"NA","promoter-TSS (NM_177384)","promoter-TSS (NM_177384)",-22,"NM_001290563",338348,"Mm.475130","NM_177384","ENSMUSG00000039021","Ttc16","1200002K10Rik","tetratricopeptide repeat domain 16","protein-coding"]
[2443,"chr4",153956818,153957431,"+",0,"NA","promoter-TSS (NM_001163019)","promoter-TSS (NM_001163019)",-113,"NM_175287",97159,"Mm.7066","NM_175287","ENSMUSG00000047613","A430005L14Rik","C79672","RIKEN cDNA A430005L14 gene","protein-coding"]
[1937,"chr2",118388329,118389286,"+",0,"NA","promoter-TSS (NM_001177806)","promoter-TSS (NM_001177806)",190,"NM_013719",27103,"Mm.217616","NM_013719","ENSMUSG00000005102","Eif2ak4","2610011M03|GCN2|MGCN2","eukaryotic translation initiation factor 2 alpha kinase 4","protein-coding"]
[2013,"chr2",156311774,156312659,"+",0,"NA","promoter-TSS (NM_027585)","promoter-TSS (NM_027585)",-257,"NM_027585",70873,"Mm.475234","NM_027585","ENSMUSG00000038085","Cnbd2","4921517L17Rik|5430421B09Rik|Cris","cyclic nucleotide binding domain containing 2","protein-coding"]
[255,"chr10",75935538,75936687,"+",0,"NA","intron (NM_175329, intron 1 of 3)","CpG",539,"NM_175329",103172,"Mm.333849","NM_175329","ENSMUSG00000049422","Chchd10","1620401E04Rik|AI267078|Ndg2","coiled-coil-helix-coiled-coil-helix domain containing 10","protein-coding"]
[264,"chr10",78574173,78575241,"+",0,"NA","intron (NM_173751, intron 1 of 15)","CpG",207,"NM_173751",216136,"Mm.2644","NM_173751","ENSMUSG00000032763","Ilvbl","5830463I21|AI415009","ilvB (bacterial acetolactate synthase)-like","protein-coding"]
[806,"chr12",102743086,102744105,"+",0,"NA","promoter-TSS (NM_177140)","promoter-TSS (NM_177140)",66,"NM_001142937",64113,"Mm.291222","NM_022323",null,"Moap1","AA987038|Map-1|Pnma4","modulator of apoptosis 1","protein-coding"]
[2230,"chr4",11155986,11156813,"+",0,"NA","promoter-TSS (NM_001199105)","promoter-TSS (NM_001199105)",-42,"NM_001199105",60599,"Mm.393018","NM_021897","ENSMUSG00000028211","Trp53inp1","2700057G22Rik|SIP|SIP18|SIP27|Stinp|Teap","transformation related protein 53 inducible nuclear protein 1","protein-coding"]
[1885,"chr2",59611748,59612642,"+",0,"NA","5' UTR (NM_198294, exon 1 of 27)","5' UTR (NM_198294, exon 1 of 27)",153,"NM_198294",66860,"Mm.27917","NM_198294","ENSMUSG00000035168","Tanc1","1200003E16Rik|Tanc|mKIAA1728","tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1","protein-coding"]
[3422,"chr9",77917218,77918074,"+",0,"NA","intron (NM_134255, intron 1 of 7)","CpG",281,"NM_134255",68801,"Mm.430736","NM_134255","ENSMUSG00000032349","Elovl5","1110059L23Rik|AI747313|AU043003|HELO1","ELOVL family member 5, elongation of long chain fatty acids (yeast)","protein-coding"]
[182,"chr1",193301896,193302713,"+",0,"NA","promoter-TSS (NM_001277928)","promoter-TSS (NM_001277928)",61,"NM_001277928",16780,"Mm.435441","NM_008484","ENSMUSG00000026639","Lamb3","-","laminin, beta 3","protein-coding"]
[2905,"chr7",28810366,28811226,"+",0,"NA","promoter-TSS (NM_177301)","promoter-TSS (NM_177301)",-94,"NM_177301",15388,"Mm.9043","NM_177301","ENSMUSG00000015165","Hnrnpl","C79783|D830027H13Rik|Hnrpl","heterogeneous nuclear ribonucleoprotein L","protein-coding"]
[1817,"chr2",27514732,27515746,"+",0,"NA","promoter-TSS (NM_080848)","promoter-TSS (NM_080848)",92,"NM_080848",140858,"Mm.28265","NM_080848","ENSMUSG00000026917","Wdr5","2410008O07Rik|AA408785|AA960360|Big|Big-3","WD repeat domain 5","protein-coding"]
[2707,"chr5",143909376,143910327,"+",0,"NA","promoter-TSS (NM_001172146)","promoter-TSS (NM_001172146)",-12,"NM_146165",231872,"Mm.200499","NM_146165","ENSMUSG00000029610","Aimp2","AA407136|AA407225|Aimp2(p38)|Jtv1","aminoacyl tRNA synthetase complex-interacting multifunctional protein 2","protein-coding"]
[556,"chr11",83409124,83410089,"+",0,"NA","promoter-TSS (NM_001013386)","promoter-TSS (NM_001013386)",-466,"NM_001013386",276952,"Mm.66275","NM_001013386","ENSMUSG00000020684","Rasl10b","B230331P10Rik|Gm729|VTS58635","RAS-like, family 10, member B","protein-coding"]
[717,"chr12",4082184,4082851,"+",0,"NA","promoter-TSS (NM_153082)","promoter-TSS (NM_153082)",-57,"NM_153082",217378,"Mm.271656","NM_153082","ENSMUSG00000020657","Dnajc27","AI639580|C330021A05Rik|Rabj|Rbj","DnaJ (Hsp40) homolog, subfamily C, member 27","protein-coding"]
[2817,"chr6",113046031,113046778,"+",0,"NA","promoter-TSS (NM_008188)","promoter-TSS (NM_008188)",77,"NM_008188",14911,"Mm.781","NM_008188","ENSMUSG00000030264","Thumpd3","AW556087|Gt(ROSA)26asSor|Gtrosa26as","THUMP domain containing 3","protein-coding"]
[815,"chr12",108178449,108179838,"+",0,"NA","promoter-TSS (NM_009832)","promoter-TSS (NM_009832)",141,"NM_028262",52690,"Mm.159185","NM_028262","ENSMUSG00000056770","Setd3","2610102I01Rik|2610305M23Rik|6030490B17Rik|D12Ertd771e","SET domain containing 3","protein-coding"]
[3486,"chr9",114688356,114689511,"+",0,"NA","exon (NM_146229, exon 1 of 13)","exon (NM_146229, exon 1 of 13)",102,"NM_146229",235661,"Mm.128627","NM_146229",null,"Dync1li1","1110053F02Rik|Dnclic1|LIC-1","dynein cytoplasmic 1 light intermediate chain 1","protein-coding"]
[671,"chr11",116030147,116030879,"+",0,"NA","intron (NM_001286006, intron 1 of 15)","CpG",197,"NM_172569",217331,"Mm.297706","NM_172569","ENSMUSG00000020770","Unk","B230379M23Rik|Zc3h5|Zc3hdc5|mKIAA1753","unkempt homolog (Drosophila)","protein-coding"]
[1511,"chr17",78936717,78937817,"+",0,"NA","promoter-TSS (NM_001024806)","promoter-TSS (NM_001024806)",132,"NM_028611",73694,"Mm.104959","NM_028611","ENSMUSG00000024082","Ndufaf7","2410091C18Rik|AL033374|PRO1853","NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 7","protein-coding"]
[2249,"chr4",40970636,40971369,"+",0,"NA","promoter-TSS (NM_001290449)","promoter-TSS (NM_001290449)",59,"NM_023739",74164,"Mm.247456","NM_023739","ENSMUSG00000028423","Nfx1","1300017N15Rik|3000003M19Rik|NFX.1|TEG-42|Tex42","nuclear transcription factor, X-box binding 1","protein-coding"]
[167,"chr1",181352285,181353240,"+",0,"NA","5' UTR (NM_001160212, exon 1 of 5)","5' UTR (NM_001160212, exon 1 of 5)",134,"NM_001160211",72978,"Mm.338083","NM_028408","ENSMUSG00000026514","Cnih3","2900075G08Rik|CNIH-3","cornichon homolog 3 (Drosophila)","protein-coding"]
[3353,"chr9",44407289,44407992,"+",0,"NA","promoter-TSS (NM_024266)","promoter-TSS (NM_024266)",-74,"NM_024266",75617,"Mm.292027","NM_024266","ENSMUSG00000009927","Rps25","2810009D21Rik","ribosomal protein S25","protein-coding"]
[2423,"chr4",148448213,148449096,"+",0,"NA","promoter-TSS (NM_020009)","promoter-TSS (NM_020009)",72,"NM_020009",56717,"Mm.21158","NM_020009","ENSMUSG00000028991","Mtor","2610315D21Rik|AI327068|FRAP|FRAP2|Frap1|RAFT1|RAPT1|flat","mechanistic target of rapamycin (serine/threonine kinase)","protein-coding"]
[692,"chr11",119913366,119914654,"+",0,"NA","intron (NM_001085498, intron 1 of 7)","CpG",200,"NM_001085498",208092,"Mm.306673","NM_001085498","ENSMUSG00000025371","Chmp6","2400004G01Rik","charged multivesicular body protein 6","protein-coding"]
[1605,"chr18",74215917,74216705,"+",0,"NA","promoter-TSS (NM_028868)","promoter-TSS (NM_028868)",99,"NM_028868",74322,"Mm.17537","NM_028868","ENSMUSG00000024560","Cxxc1","2410002I16Rik|5830420C16Rik|AI426635|Cfp1|Cgbp|PHF18","CXXC finger 1 (PHD domain)","protein-coding"]
[663,"chr11",115419948,115420925,"+",0,"NA","promoter-TSS (NM_027862)","promoter-TSS (NM_027862)",310,"NM_183285",70382,"Mm.276299","NM_183285","ENSMUSG00000016940","Kctd2","2310012I15Rik","potassium channel tetramerisation domain containing 2","protein-coding"]
[2431,"chr4",152008603,152009991,"+",0,"NA","exon (NM_001033352, exon 1 of 4)","exon (NM_001033352, exon 1 of 4)",406,"NM_001033352",242785,"Mm.22306","NM_001033352","ENSMUSG00000073700","Klhl21","1810045K06Rik|D330008A20|mKIAA0469","kelch-like 21","protein-coding"]
[1907,"chr2",76405869,76406736,"+",0,"NA","promoter-TSS (NM_001290734)","promoter-TSS (NM_001290734)",-206,"NM_145525",99031,"Mm.240435","NM_145525","ENSMUSG00000042359","Osbpl6","1110062M20Rik|AI596402|ORP-6|mKIAA4128","oxysterol binding protein-like 6","protein-coding"]
[854,"chr13",12565642,12566435,"+",0,"NA","5' UTR (NM_026184, exon 1 of 16)","5' UTR (NM_026184, exon 1 of 16)",155,"NM_026184",67475,"Mm.358706","NM_026184","ENSMUSG00000057069","Ero1lb","1300013B24Rik|1700065B09Rik|AI447560|ero1-beta","ERO1-like beta (S. cerevisiae)","protein-coding"]
[1945,"chr2",119325014,119326693,"+",0,"NA","promoter-TSS (NM_019454)","promoter-TSS (NM_019454)",69,"NM_019454",54485,"Mm.143719","NM_019454","ENSMUSG00000027314","Dll4","Delta4","delta-like 4 (Drosophila)","protein-coding"]
[3120,"chr8",13869581,13870200,"+",0,"NA","intron (NM_181854, intron 1 of 1)","CpG",249,"NM_181854",101994,"Mm.289346","NM_181854","ENSMUSG00000047710","Champ1","AA675043|AI116001|D8Ertd457e|D8Ertd569e|Zfp828|Znf828|mKIAA1802","chromosome alignment maintaining phosphoprotein 1","protein-coding"]
[969,"chr14",14012205,14013330,"+",0,"NA","intron (NM_139227, intron 1 of 11)","CpG",276,"NM_139227",246103,"Mm.133625","NM_139227","ENSMUSG00000021738","Atxn7","A430107N12Rik|AI627028|Sca7|ataxin-7","ataxin 7","protein-coding"]
[1174,"chr15",81802436,81802977,"+",0,"NA","promoter-TSS (NM_153484)","promoter-TSS (NM_153484)",33,"NM_153484",21685,"Mm.270278","NM_017376","ENSMUSG00000022389","Tef","2310028D20Rik","thyrotroph embryonic factor","protein-coding"]
[1946,"chr2",119594165,119594764,"+",0,"NA","intron (NR_027832, intron 1 of 2)","CpG",168,"NR_015473",66602,"Mm.379181","NR_015473","ENSMUSG00000085438","1700020I14Rik","1190006L01Rik|4933437I03Rik|AI451541|AI585852|AW538376|AW558897|Cyrano","RIKEN cDNA 1700020I14 gene","ncRNA"]
[510,"chr11",73160131,73160858,"+",0,"NA","promoter-TSS (NM_033321)","promoter-TSS (NM_033321)",-36,"NM_033321",94045,"Mm.156893","NM_033321","ENSMUSG00000005950","P2rx5","P2X5","purinergic receptor P2X, ligand-gated ion channel, 5","protein-coding"]
[3020,"chr7",113765655,113767002,"+",0,"NA","5' UTR (NM_145584, exon 1 of 16)","5' UTR (NM_145584, exon 1 of 16)",330,"NM_145584",233744,"Mm.334160","NM_145584","ENSMUSG00000038156","Spon1","AI666765|AW455831|BC020531|D330035F22Rik|FSP","spondin 1, (f-spondin) extracellular matrix protein","protein-coding"]
[393,"chr11",20543162,20543911,"+",0,"NA","5' UTR (NM_021372, exon 1 of 2)","5' UTR (NM_021372, exon 1 of 2)",283,"NM_021372",58172,"Mm.339676","NM_021372","ENSMUSG00000049800","Sertad2","AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127","SERTA domain containing 2","protein-coding"]
[2276,"chr4",53713983,53714726,"+",0,"NA","intron (NM_139309, intron 1 of 9)","CpG",172,"NM_139309",246179,"Mm.247210","NM_139309","ENSMUSG00000028414","Fktn","D830030O17Rik|Fcmd","fukutin","protein-coding"]
[1501,"chr17",71183195,71184151,"+",0,"NA","promoter-TSS (NM_022882)","promoter-TSS (NM_022882)",-305,"NM_022882",64898,"Mm.227924","NM_022882","ENSMUSG00000024052","Lpin2","2610511G02Rik|AI481352|AW742896","lipin 2","protein-coding"]
[3262,"chr8",112010907,112012337,"+",0,"NA","promoter-TSS (NM_053092)","promoter-TSS (NM_053092)",263,"NM_020584",57321,"Mm.213064","NM_020584","ENSMUSG00000033430","Terf2ip","Rap1","telomeric repeat binding factor 2, interacting protein","protein-coding"]
[658,"chr11",115163222,115164340,"+",0,"NA","exon (NM_012030, exon 1 of 6)","exon (NM_012030, exon 1 of 6)",440,"NM_012030",26941,"Mm.27842","NM_012030","ENSMUSG00000020733","Slc9a3r1","EBP-50|NHE-RF|NHERF-1|NHERF1","solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1","protein-coding"]
[274,"chr10",79859935,79860868,"+",0,"NA","TTS (NM_001170935)","TTS (NM_001170935)",-2186,"NR_105875",102465549,null,"NR_105875","ENSMUSG00000098562","Mir6910","Gm27763|mmu-mir-6910","microRNA 6910","ncRNA"]
[549,"chr11",79992444,79993347,"+",0,"NA","promoter-TSS (NM_199196)","promoter-TSS (NM_199196)",-211,"NM_001163018",52615,"Mm.283410","NM_199196","ENSMUSG00000017548","Suz12","2610028O16Rik|AI195385|AU016842|AW536442|D11Ertd530e|mKIAA0160","suppressor of zeste 12 homolog (Drosophila)","protein-coding"]
[877,"chr13",43122572,43123301,"+",0,"NA","promoter-TSS (NM_001005748)","promoter-TSS (NM_001005748)",97,"NM_001005748",218194,"Mm.160124","NM_198419","ENSMUSG00000054728","Phactr1","9630030F18Rik|Rpel1","phosphatase and actin regulator 1","protein-coding"]
[3465,"chr9",108338987,108339711,"+",0,"NA","exon (NM_008160, exon 1 of 2)","exon (NM_008160, exon 1 of 2)",269,"NM_008160",14775,"Mm.1090","NM_008160","ENSMUSG00000063856","Gpx1","AI195024|AL033363|CGPx|GPx-1|GSHPx-1|Gpx","glutathione peroxidase 1","protein-coding"]
[1508,"chr17",74527747,74529403,"+",0,"NA","exon (NM_007566, exon 1 of 73)","exon (NM_007566, exon 1 of 73)",280,"NM_007566",12211,"Mm.442564","NM_007566","ENSMUSG00000024073","Birc6","A430032G04Rik|A430040A19Rik|AA501170|Bruce|D630005A10Rik|mKIAA1289","baculoviral IAP repeat-containing 6","protein-coding"]
[3034,"chr7",122969530,122970734,"+",0,"NA","promoter-TSS (NM_175023)","promoter-TSS (NM_175023)",327,"NR_045614",73951,"Mm.389936","NR_045614",null,"4930413G21Rik","-","RIKEN cDNA 4930413G21 gene","ncRNA"]
[1128,"chr15",75862134,75862655,"+",0,"NA","promoter-TSS (NM_026960)","promoter-TSS (NM_026960)",55,"NM_026960",69146,"Mm.27385","NM_026960","ENSMUSG00000022575","Gsdmd","1810036L03Rik|AW558049|DF5L|Dfna5l|Gsdmdc1|M2-4","gasdermin D","protein-coding"]
[1771,"chr2",3283569,3284253,"+",0,"NA","promoter-TSS (NM_001290369)","promoter-TSS (NM_001290369)",-301,"NM_008708",18108,"Mm.65021","NM_008708","ENSMUSG00000026643","Nmt2","A930001K02Rik|AI605445|AU044698|hNMT-2","N-myristoyltransferase 2","protein-coding"]
[2891,"chr7",25267253,25267890,"+",0,"NA","promoter-TSS (NM_001302811)","promoter-TSS (NM_001302811)",-128,"NM_001302811",71722,"Mm.28833","NM_027882","ENSMUSG00000005442","Cic","1200010B10Rik|mKIAA0306","capicua homolog (Drosophila)","protein-coding"]
[946,"chr13",100107729,100108494,"+",0,"NA","promoter-TSS (NM_011353)","promoter-TSS (NM_011353)",92,"NM_011353",20365,"Mm.286177","NM_011353","ENSMUSG00000021643","Serf1","4F5|Msmac1|m4F5","small EDRK-rich factor 1","protein-coding"]
[3515,"chrX",36328323,36329419,"+",0,"NA","exon (NM_028894, exon 1 of 11)","exon (NM_028894, exon 1 of 11)",462,"NM_028894",74365,"Mm.327654","NM_028894",null,"Lonrf3","4932412G04Rik|5730439E01Rik|A830039N02Rik|AU023707|Rnf127","LON peptidase N-terminal domain and ring finger 3","protein-coding"]
[1724,"chr19",38054927,38055374,"+",0,"NA","5' UTR (NM_028760, exon 1 of 10)","5' UTR (NM_028760, exon 1 of 10)",108,"NM_001164362",74107,"Mm.9916","NM_028293","ENSMUSG00000024989","Cep55","1200008O12Rik|2700032M20Rik","centrosomal protein 55","protein-coding"]
[1520,"chr17",87282372,87283558,"+",0,"NA","promoter-TSS (NM_028639)","promoter-TSS (NM_028639)",79,"NM_028639",225049,"Mm.77396","NM_028639","ENSMUSG00000036918","Ttc7","1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea","tetratricopeptide repeat domain 7","protein-coding"]
[2644,"chr5",124598550,124599369,"+",0,"NA","intron (NM_026486, intron 1 of 17)","intron (NM_026486, intron 1 of 17)",210,"NM_026486",67978,"Mm.1158","NM_026486",null,"Tctn2","4432405B04Rik|Tect2","tectonic family member 2","protein-coding"]
[2148,"chr3",89421446,89422389,"+",0,"NA","exon (NM_001113331, exon 1 of 12)","exon (NM_001113331, exon 1 of 12)",296,"NM_001113331",20416,"Mm.86595","NM_011368","ENSMUSG00000042626","Shc1","Shc|ShcA|p66|p66shc","src homology 2 domain-containing transforming protein C1","protein-coding"]
[250,"chr10",74966816,74967552,"+",0,"NA","promoter-TSS (NM_010311)","promoter-TSS (NM_010311)",-47,"NM_010311",14687,"Mm.32595","NM_010311","ENSMUSG00000040009","Gnaz","AI847979|Gz","guanine nucleotide binding protein, alpha z subunit","protein-coding"]
[303,"chr10",81232816,81233374,"+",0,"NA","promoter-TSS (NM_001034895)","promoter-TSS (NM_001034895)",-68,"NM_001034895",103406,"Mm.158783","NM_001034895","ENSMUSG00000034949","Zfr2","2010013I23Rik|9130206N08Rik|AW045600|mKIAA1086","zinc finger RNA binding protein 2","protein-coding"]
[1361,"chr17",14279156,14279920,"+",0,"NA","promoter-TSS (NM_022315)","promoter-TSS (NM_022315)",32,"NM_022315",64074,"Mm.30162","NM_022315","ENSMUSG00000023886","Smoc2","1700056C05Rik|5430426J21Rik|Smoc2l","SPARC related modular calcium binding 2","protein-coding"]
[614,"chr11",101069803,101070639,"+",0,"NA","exon (NM_013792, exon 1 of 6)","exon (NM_013792, exon 1 of 6)",127,"NM_013792",27419,"Mm.95452","NM_013792","ENSMUSG00000001751","Naglu","-","alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)","protein-coding"]
[2963,"chr7",79659929,79661056,"+",0,"NA","exon (NM_029835, exon 1 of 22)","exon (NM_029835, exon 1 of 22)",296,"NM_029835",77011,"Mm.28132","NM_029835","ENSMUSG00000046591","Ticrr","5730590G19Rik|BC028450|Lrrk1","TOPBP1-interacting checkpoint and replication regulator","protein-coding"]
[1765,"chr19",57452798,57453332,"+",0,"NA","exon (NM_029839, exon 1 of 7)","exon (NM_029839, exon 1 of 7)",159,"NM_028115",72133,"Mm.258404","NM_028115","ENSMUSG00000025086","Trub1","2610009I02Rik|9030425C13Rik|AI448235|BB118943|C76870","TruB pseudouridine (psi) synthase homolog 1 (E. coli)","protein-coding"]
[3155,"chr8",69654276,69655091,"+",0,"NA","intron (NM_001177527, intron 1 of 3)","CpG",127,"NM_001177527",636741,"Mm.480188","NM_001177527","ENSMUSG00000091764","Zfp964","4732490P12|EG636741|Gm7187","zinc finger protein 964","protein-coding"]
[2959,"chr7",75455186,75456037,"+",0,"NA","promoter-TSS (NM_029332)","promoter-TSS (NM_029332)",77,"NM_029332",75547,"Mm.216107","NM_029332","ENSMUSG00000066406","Akap13","1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC","A kinase (PRKA) anchor protein 13","protein-coding"]
[3280,"chr8",120536953,120537597,"+",0,"NA","promoter-TSS (NM_001145896)","promoter-TSS (NM_001145896)",-134,"NM_001145896",382034,"Mm.334856","NM_198671","ENSMUSG00000031822","Gse1","2210013I18Rik|mKIAA0182","genetic suppressor element 1","protein-coding"]
[130,"chr1",143777084,143777909,"+",0,"NA","promoter-TSS (NM_013835)","promoter-TSS (NM_013835)",218,"NM_019562",56207,"Mm.261004","NM_019562","ENSMUSG00000018189","Uchl5","5830413B11Rik|Uch37","ubiquitin carboxyl-terminal esterase L5","protein-coding"]
[53,"chr1",71652588,71653348,"+",0,"NA","promoter-TSS (NR_040308)","promoter-TSS (NR_040308)",266,"NM_010233",14268,"Mm.193099","NM_010233","ENSMUSG00000026193","Fn1","E330027I09|Fn|Fn-1","fibronectin 1","protein-coding"]
[1373,"chr17",24414504,24415298,"+",0,"NA","promoter-TSS (NR_033554)","promoter-TSS (NR_033554)",226,"NM_001080128",19826,"Mm.1951","NM_009070","ENSMUSG00000034681","Rnps1","-","ribonucleic acid binding protein S1","protein-coding"]
[2925,"chr7",45012021,45013060,"+",0,"NA","promoter-TSS (NR_106021)","promoter-TSS (NR_106021)",-53,"NR_106021",102466218,null,"NR_106021","ENSMUSG00000098839","Mir7054","Gm27557|mmu-mir-7054","microRNA 7054","ncRNA"]
[1465,"chr17",43801507,43802181,"+",0,"NA","promoter-TSS (NM_207649)","promoter-TSS (NM_207649)",-7,"NM_207649",53901,"Mm.251242","NM_030598","ENSMUSG00000039601","Rcan2","Csp2|Dscr1l1|MCIP2|ZAKI-4","regulator of calcineurin 2","protein-coding"]
[2990,"chr7",98838662,98839404,"+",0,"NA","5' UTR (NM_001285795, exon 1 of 5)","5' UTR (NM_001285795, exon 1 of 5)",188,"NM_001285795",22411,"Mm.22182","NM_009519","ENSMUSG00000015957","Wnt11","-","wingless-type MMTV integration site family, member 11","protein-coding"]
[1302,"chr16",32643790,32645024,"+",0,"NA","promoter-TSS (NM_001110147)","promoter-TSS (NM_001110147)",-236,"NM_001110147",51789,"Mm.251115","NM_016788","ENSMUSG00000022791","Tnk2","Ack|Ack-1|Ack1|Cdgip|Pyk1","tyrosine kinase, non-receptor, 2","protein-coding"]
[2239,"chr4",22357352,22358210,"+",0,"NA","intron (NR_104378, intron 1 of 8)","CpG",238,"NR_104380",269514,"Mm.40708","NM_172988","ENSMUSG00000040410","Fbxl4","AI836810|FBL4|FBL5","F-box and leucine-rich repeat protein 4","protein-coding"]
[1397,"chr17",25727522,25728646,"+",0,"NA","promoter-TSS (NM_145409)","promoter-TSS (NM_145409)",333,"NM_028009",106707,"Mm.24603","NM_028009","ENSMUSG00000041199","Rpusd1","2310051D06Rik|AU019540|Rlucl","RNA pseudouridylate synthase domain containing 1","protein-coding"]
[941,"chr13",96542734,96543546,"+",0,"NA","promoter-TSS (NM_012048)","promoter-TSS (NM_012048)",405,"NM_023420",68018,"Mm.24125","NM_023420","ENSMUSG00000021669","Col4a3bp","2810404O15Rik|9230101K08Rik|AU016711|CERT|GPBP","collagen, type IV, alpha 3 (Goodpasture antigen) binding protein","protein-coding"]
[3341,"chr9",35116166,35116881,"+",0,"NA","promoter-TSS (NR_029475)","promoter-TSS (NR_029475)",-205,"NR_029475",78934,"Mm.391688","NR_029475","ENSMUSG00000070315","4930581F22Rik","-","RIKEN cDNA 4930581F22 gene","ncRNA"]
[3029,"chr7",121392169,121392678,"+",0,"NA","5' UTR (NM_001081327, exon 1 of 2)","5' UTR (NM_001081327, exon 1 of 2)",127,"NM_001081327",195646,"Mm.247449","NM_177575","ENSMUSG00000046321","Hs3st2","6430516N12Rik|A830061E14Rik|AW491345","heparan sulfate (glucosamine) 3-O-sulfotransferase 2","protein-coding"]
[583,"chr11",93995668,93996157,"+",0,"NA","promoter-TSS (NM_027569)","promoter-TSS (NM_027569)",-179,"NM_001199203",70834,"Mm.260737","NM_027569","ENSMUSG00000020859","Spag9","3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1","sperm associated antigen 9","protein-coding"]
[2392,"chr4",136310409,136311700,"+",0,"NA","5' UTR (NM_028871, exon 1 of 11)","5' UTR (NM_028871, exon 1 of 11)",112,"NM_001277123",74326,"Mm.31051","NM_028871","ENSMUSG00000066037","Hnrnpr","2610003J05Rik|2610528B01Rik|Hnrpr","heterogeneous nuclear ribonucleoprotein R","protein-coding"]
[3436,"chr9",96195911,96196852,"+",0,"NA","5' UTR (NM_001184708, exon 1 of 10)","5' UTR (NM_001184708, exon 1 of 10)",106,"NM_001184706",211586,"Mm.17977","NM_178667","ENSMUSG00000032411","Tfdp2","1110029I05Rik|A330080J22Rik|DP-3|DP3","transcription factor Dp 2","protein-coding"]
[1879,"chr2",50066311,50067070,"+",0,"NA","intron (NM_177139, intron 1 of 4)","CpG",261,"NM_177139",320343,"Mm.130607","NM_177139","ENSMUSG00000050447","Lypd6","E130115E03Rik","LY6/PLAUR domain containing 6","protein-coding"]
[3313,"chr8",126422260,126422880,"+",0,"NA","promoter-TSS (NM_174987)","promoter-TSS (NM_174987)",69,"NM_174987",67892,"Mm.31946","NM_174987","ENSMUSG00000051671","Coa6","1810063B05Rik|AI447995","cytochrome c oxidase assembly factor 6","protein-coding"]
[1824,"chr2",28641093,28641958,"+",0,"NA","intron (NM_001289576, intron 1 of 22)","CpG",292,"NM_022887",64930,"Mm.224354","NM_022887","ENSMUSG00000026812","Tsc1","-","tuberous sclerosis 1","protein-coding"]
[2917,"chr7",40899129,40899798,"+",0,"NA","intron (NM_021387, intron 1 of 4)","CpG",185,"NM_021387",58188,"Mm.150675","NM_021387",null,"Vstm2b","2900093B09Rik|AB030198","V-set and transmembrane domain containing 2B","protein-coding"]
[1869,"chr2",36048834,36049528,"+",0,"NA","promoter-TSS (NM_029309)","promoter-TSS (NM_029309)",111,"NM_026703",68375,"Mm.19834","NM_026703","ENSMUSG00000026895","Ndufa8","0610033L03Rik|AW261656","NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8","protein-coding"]
[3190,"chr8",83899923,83900702,"+",0,"NA","5' UTR (NM_181039, exon 1 of 23)","5' UTR (NM_181039, exon 1 of 23)",214,"NM_181039",330814,"Mm.260733","NM_181039","ENSMUSG00000013033","Adgrl1","2900070I05Rik|AI182398|CLIBA|Lec2|Lphn1|mKIAA0821","adhesion G protein-coupled receptor L1","protein-coding"]
[2342,"chr4",125066468,125066957,"+",0,"NA","promoter-TSS (NM_175246)","promoter-TSS (NM_175246)",19,"NM_175246",76793,"Mm.22548","NM_175246","ENSMUSG00000050213","Snip1","2410133M08Rik","Smad nuclear interacting protein 1","protein-coding"]
[591,"chr11",96789002,96789628,"+",0,"NA","5' UTR (NM_007622, exon 1 of 6)","5' UTR (NM_007622, exon 1 of 6)",179,"NM_007622",12412,"Mm.29055","NM_007622","ENSMUSG00000018666","Cbx1","Cbx|Cbx-rs2|E430007M08Rik|HP1B|Hp1beta|M31|MOD1","chromobox 1","protein-coding"]
[3516,"chrX",48694806,48695430,"+",0,"NA","exon (NM_173376, exon 1 of 6)","exon (NM_173376, exon 1 of 6)",114,"NM_173376",209003,"Mm.32561","NM_173376","ENSMUSG00000031107","Rbmx2","2700089A17Rik|2810411A03Rik|CGI-79","RNA binding motif protein, X-linked 2","protein-coding"]
[2304,"chr4",101068702,101069334,"+",0,"NA","promoter-TSS (NM_183024)","promoter-TSS (NM_183024)",-20,"NM_183024",242570,"Mm.185636","NM_183024","ENSMUSG00000035275","Raver2","A430091O22Rik","ribonucleoprotein, PTB-binding 2","protein-coding"]
[832,"chr12",111712577,111713465,"+",0,"NA","promoter-TSS (NM_001163388)","promoter-TSS (NM_001163388)",235,"NM_027404",70369,"Mm.44239","NM_027404","ENSMUSG00000049792","Bag5","1600025G07Rik|4930405J06Rik","BCL2-associated athanogene 5","protein-coding"]
[3481,"chr9",110879852,110881352,"+",0,"NA","promoter-TSS (NM_146260)","promoter-TSS (NM_146260)",280,"NM_001146060",235633,"Mm.86338","NM_146228","ENSMUSG00000044037","Als2cl","79H19D|79H19E|BC022645|D930044G19Rik|mRn.49018","ALS2 C-terminal like","protein-coding"]
[2804,"chr6",90618822,90619919,"+",0,"NA","5' UTR (NM_001037493, exon 1 of 10)","5' UTR (NM_001037493, exon 1 of 10)",124,"NM_001037493",71699,"Mm.272633","NM_027868","ENSMUSG00000030089","Slc41a3","1010001P06Rik|AI480742|SLC41A1-L2","solute carrier family 41, member 3","protein-coding"]
[2341,"chr4",125029805,125030523,"+",0,"NA","exon (NM_145552, exon 1 of 16)","exon (NM_145552, exon 1 of 16)",150,"NM_145552",230737,"Mm.90760","NM_145552","ENSMUSG00000028869","Gnl2","BC003262|HUMAUANTIG|Ngp-1","guanine nucleotide binding protein-like 2 (nucleolar)","protein-coding"]
[2135,"chr3",87970815,87972071,"+",0,"NA","exon (NM_016701, exon 1 of 4)","exon (NM_016701, exon 1 of 4)",350,"NM_016701",18008,"Mm.331129","NM_016701","ENSMUSG00000004891","Nes","AA166324|C78523|ESTM46","nestin","protein-coding"]
[828,"chr12",111406648,111407336,"+",0,"NA","intron (NM_001101503, intron 1 of 3)","intron (NM_001101503, intron 1 of 3)",183,"NM_001101503",380787,"Mm.125602","NM_001101503","ENSMUSG00000087075","A230065H16Rik","Gm898|Lbh2","RIKEN cDNA A230065H16 gene","protein-coding"]
[276,"chr10",79959896,79960904,"+",0,"NA","intron (NM_175450, intron 1 of 9)","CpG",248,"NM_175450",216156,"Mm.35828","NM_175450","ENSMUSG00000035754","Wdr18","2310012I10Rik|AU044733|AW122032","WD repeat domain 18","protein-coding"]
[102,"chr1",121430907,121431885,"+",0,"NA","intron (NM_001025156, intron 1 of 23)","intron (NM_001025156, intron 1 of 23)",329,"NM_001025156",70829,"Mm.25788","NM_027567","ENSMUSG00000026339","Ccdc93","4633402D15Rik|9230102M16Rik","coiled-coil domain containing 93","protein-coding"]
[1920,"chr2",91096528,91097251,"+",0,"NA","promoter-TSS (NM_011355)","promoter-TSS (NM_011355)",92,"NM_011355",20375,"Mm.1302","NM_011355",null,"Spi1","Dis-1|Dis1|PU.1|Sfpi-1|Sfpi1|Spi-1|Tcfpu1|Tfpu.1","spleen focus forming virus (SFFV) proviral integration oncogene","protein-coding"]
[2465,"chr5",3802298,3803696,"+",0,"NA","promoter-TSS (NM_030675)","promoter-TSS (NM_030675)",127,"NM_001289528",70797,"Mm.130148","NM_001003909","ENSMUSG00000040351","Ankib1","2310061P20Rik|4631416I11Rik|AW494740|C80642|mKIAA1386","ankyrin repeat and IBR domain containing 1","protein-coding"]
[1831,"chr2",29965552,29966253,"+",0,"NA","intron (NM_001309460, intron 1 of 57)","CpG",342,"NM_001309460",20740,"Mm.204969","NM_001076554","ENSMUSG00000057738","Sptan1","2610027H02Rik|Spna-2|Spna2","spectrin alpha, non-erythrocytic 1","protein-coding"]
[2992,"chr7",99267961,99268774,"+",0,"NA","promoter-TSS (NM_001043355)","promoter-TSS (NM_001043355)",21,"NM_001043355",17760,"Mm.154087","NM_010837","ENSMUSG00000055407","Map6","2810411E12Rik|Map-6|Mtap6|STOP","microtubule-associated protein 6","protein-coding"]
[2639,"chr5",123996840,123998139,"+",0,"NA","TTS (NR_105999)","TTS (NR_105999)",637,"NR_105999",102465625,null,"NR_105999","ENSMUSG00000098454","Mir7032","Gm27309|mmu-mir-7032","microRNA 7032","ncRNA"]
[3483,"chr9",111311189,111312262,"+",0,"NA","promoter-TSS (NM_001164659)","promoter-TSS (NM_001164659)",-14,"NM_001164659",320429,"Mm.270754","NM_001164659","ENSMUSG00000062296","Trank1","A230061D21Rik|C030048J01Rik|Gm187|Lba1","tetratricopeptide repeat and ankyrin repeat containing 1","protein-coding"]
[1218,"chr15",100038384,100039387,"+",0,"NA","exon (NM_001159361, exon 1 of 38)","exon (NM_001159361, exon 1 of 38)",221,"NM_001159361",239667,"Mm.243658","NM_172819","ENSMUSG00000023026","Dip2b","4932422C22|AI317237|AI854602|mKIAA1463","DIP2 disco-interacting protein 2 homolog B (Drosophila)","protein-coding"]
[1404,"chr17",26252779,26253414,"+",0,"NA","intron (NM_028190, intron 1 of 9)","CpG",186,"NR_037905",66978,"Mm.440216","NM_025881","ENSMUSG00000024188","Luc7l","1810045C04Rik|2410018D03Rik","Luc7 homolog (S. cerevisiae)-like","protein-coding"]
[2398,"chr4",138261887,138262393,"+",0,"NA","promoter-TSS (NM_001190978)","promoter-TSS (NM_001190978)",-111,"NM_001190978",16559,"Mm.271936","NM_010623","ENSMUSG00000028758","Kif17","5930435E01Rik|AW492270|Kif17b|mKIAA1405","kinesin family member 17","protein-coding"]
[1543,"chr18",24603076,24604341,"+",0,"NA","promoter-TSS (NM_021448)","promoter-TSS (NM_021448)",109,"NM_139143",106957,"Mm.21688","NM_139143","ENSMUSG00000024270","Slc39a6","Ermelin","solute carrier family 39 (metal ion transporter), member 6","protein-coding"]
[259,"chr10",77417526,77418485,"+",0,"NA","promoter-TSS (NR_027377)","promoter-TSS (NR_027377)",268,"NM_130895",110532,"Mm.276815","NM_130895","ENSMUSG00000020262","Adarb1","1700057H01Rik|AW124433|AW558573|Adar2|BB220382|D10Bwg0447e|Red1","adenosine deaminase, RNA-specific, B1","protein-coding"]
[424,"chr11",51262636,51263879,"+",0,"NA","promoter-TSS (NM_177567)","promoter-TSS (NM_177567)",143,"NM_007714",12750,"Mm.239354","NM_007714","ENSMUSG00000020385","Clk4","AI987988|C85119","CDC like kinase 4","protein-coding"]
[1625,"chr19",3850962,3852373,"+",0,"NA","promoter-TSS (NM_013490)","promoter-TSS (NM_013490)",-106,"NM_001271496",12660,"Mm.225505","NM_013490","ENSMUSG00000024843","Chka","CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha","choline kinase alpha","protein-coding"]
[163,"chr1",180725656,180726617,"+",0,"NA","promoter-TSS (NM_133225)","promoter-TSS (NM_133225)",93,"NM_133225",170760,"Mm.272981","NM_133225","ENSMUSG00000026499","Acbd3","60kDa|8430407O11Rik|D1Ertd10e|GCP60|GOLPH1|Gocap1|Pap7","acyl-Coenzyme A binding domain containing 3","protein-coding"]
[1106,"chr15",44427470,44428138,"+",0,"NA","promoter-TSS (NM_175009)","promoter-TSS (NM_175009)",-307,"NM_175009",223527,"Mm.291828","NM_175009","ENSMUSG00000022338","Eny2","1810057B09Rik|6720481I12|DC6|Ey2","enhancer of yellow 2 homolog (Drosophila)","protein-coding"]
[1402,"chr17",26138373,26139305,"+",0,"NA","5' UTR (NM_001159598, exon 1 of 10)","5' UTR (NM_001159598, exon 1 of 10)",153,"NM_001159598",12005,"Mm.23684","NM_009733","ENSMUSG00000024182","Axin1","AI316800|Axin|Fu|Kb|Ki|fused|kinky|knobbly","axin 1","protein-coding"]
[1836,"chr2",30391924,30393268,"+",0,"NA","intron (NM_001290509, intron 1 of 6)","CpG",342,"NM_001290508",57170,"Mm.285167","NM_020329","ENSMUSG00000026856","Dolpp1","0610011H20Rik|AB030189|LSFR2","dolichyl pyrophosphate phosphatase 1","protein-coding"]
[2986,"chr7",97696477,97697172,"+",0,"NA","exon (NM_023671, exon 1 of 7)","exon (NM_023671, exon 1 of 7)",167,"NM_023671",12729,"Mm.21482","NM_023671",null,"Clns1a","2610036D06Rik|2610100O04Rik|Clci|Clcni|ICLN","chloride channel, nucleotide-sensitive, 1A","protein-coding"]
[2402,"chr4",138724873,138725519,"+",0,"NA","promoter-TSS (NM_008868)","promoter-TSS (NM_008868)",69,"NR_104373",212190,"Mm.292226","NM_178671","ENSMUSG00000043621","Ubxn10","5730509E04Rik|A830047D02|Ubxd3","UBX domain protein 10","protein-coding"]
[1531,"chr18",11052457,11053421,"+",0,"NA","promoter-TSS (NR_105023)","promoter-TSS (NR_105023)",-372,"NR_105023",68434,"Mm.57626","NR_105022","ENSMUSG00000097222","1010001N08Rik","-","RIKEN cDNA 1010001N08 gene","ncRNA"]
[2731,"chr6",17280963,17281770,"+",0,"NA","exon (NM_016900, exon 1 of 3)","exon (NM_016900, exon 1 of 3)",181,"NM_016900",12390,"Mm.396075","NM_016900","ENSMUSG00000000058","Cav2","AI447843","caveolin 2","protein-coding"]
[2929,"chr7",45570079,45570856,"+",0,"NA","promoter-TSS (NM_001243052)","promoter-TSS (NM_001243052)",314,"NM_009737",12036,"Mm.24210","NM_009737","ENSMUSG00000030826","Bcat2","Bcat-2|Eca40","branched chain aminotransferase 2, mitochondrial","protein-coding"]
[1841,"chr2",31151974,31152712,"+",0,"NA","promoter-TSS (NM_178760)","promoter-TSS (NM_178760)",27,"NM_178760",277463,"Mm.236074","NM_178760",null,"Gpr107","9930033D15Rik|AI790205|C530034M11|mKIAA1624","G protein-coupled receptor 107","protein-coding"]
[347,"chr10",116472948,116473718,"+",0,"NA","exon (NM_021452, exon 1 of 3)","exon (NM_021452, exon 1 of 3)",170,"NR_130644",100504412,"Mm.398212","NR_130644","ENSMUSG00000085837","Kcnmb4os2","4933400F03Rik","potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 2","ncRNA"]
[3294,"chr8",122883759,122884574,"+",0,"NA","exon (NM_001081379, exon 13 of 13)","exon (NM_001081379, exon 13 of 13)",35792,"NM_007662",12555,"Mm.1976","NM_007662","ENSMUSG00000031962","Cdh15","AI323380|Cdh14|Mcad","cadherin 15","protein-coding"]
[2738,"chr6",29916489,29917596,"+",0,"NA","promoter-TSS (NM_001037740)","promoter-TSS (NM_001037740)",29,"NR_104576",320609,"Mm.56097","NM_177204","ENSMUSG00000039629","Strip2","D330017J20Rik|Fam40b","striatin interacting protein 2","protein-coding"]
[1333,"chr16",87698716,87699445,"+",0,"NA","intron (NM_007520, intron 1 of 4)","CpG",126,"NM_007520",12013,"Mm.26147","NM_007520","ENSMUSG00000025612","Bach1","6230421P05Rik|AI323795","BTB and CNC homology 1","protein-coding"]
[2586,"chr5",110544167,110544974,"+",0,"NA","5' UTR (NM_198306, exon 1 of 11)","5' UTR (NM_198306, exon 1 of 11)",215,"NM_198306",231605,"Mm.275748","NM_198306","ENSMUSG00000033316","Galnt9","GalNAc-T9","UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9","protein-coding"]
[434,"chr11",53456938,53457777,"+",0,"NA","intron (NM_027917, intron 1 of 7)","CpG",152,"NM_027917",71774,"Mm.274370","NM_027917","ENSMUSG00000018387","Shroom1","Apx|Shrm1","shroom family member 1","protein-coding"]
[865,"chr13",30659567,30660574,"+",0,"NA","promoter-TSS (NM_134068)","promoter-TSS (NM_134068)",11,"NM_134068",105352,"Mm.289646","NM_134068","ENSMUSG00000069255","Dusp22","JKAP|JSP1|LMW-DSP2|MKPX","dual specificity phosphatase 22","protein-coding"]
[1184,"chr15",84680722,84681719,"+",0,"NA","exon (NM_146061, exon 1 of 8)","exon (NM_146061, exon 1 of 8)",222,"NM_146061",109270,"Mm.291372","NM_146061","ENSMUSG00000036106","Prr5","AU043908|Arhgap8|C030017C09Rik|C78947|Protor-1|Protor1","proline rich 5 (renal)","protein-coding"]
[3165,"chr8",70329560,70330362,"+",0,"NA","5' UTR (NM_008107, exon 1 of 2)","5' UTR (NM_008107, exon 1 of 2)",196,"NM_008107",14559,"Mm.258280","NM_008107","ENSMUSG00000055694","Gdf1","AI385651|Gdf-1","growth differentiation factor 1","protein-coding"]
[2770,"chr6",67036572,67037685,"+",0,"NA","intron (NM_007836, intron 1 of 3)","CpG-12134",279,"NM_007836",13197,"Mm.72235","NM_007836","ENSMUSG00000036390","Gadd45a","AA545191|Ddit1|GADD45","growth arrest and DNA-damage-inducible 45 alpha","protein-coding"]
[3087,"chr7",141454973,141455628,"+",0,"NA","non-coding (NR_028142, exon 1 of 10)","non-coding (NR_028142, exon 1 of 10)",112,"NM_001163689",66853,"Mm.29998","NM_025802","ENSMUSG00000025509","Pnpla2","0610039C21Rik|1110001C14Rik|Atgl|TTS-2.2","patatin-like phospholipase domain containing 2","protein-coding"]
[442,"chr11",55204136,55204843,"+",0,"NA","intron (NM_153139, intron 1 of 10)","CpG",149,"NM_153139",215335,"Mm.35732","NM_153139","ENSMUSG00000020261","Slc36a1","5830411H19Rik|AI839897|Pat1","solute carrier family 36 (proton/amino acid symporter), member 1","protein-coding"]
[2156,"chr3",95282760,95283650,"+",0,"NA","5' UTR (NM_199475, exon 1 of 10)","5' UTR (NM_199475, exon 1 of 10)",270,"NM_199475",75007,"Mm.279287","NM_133858","ENSMUSG00000038712","Fam63a","1810005H09Rik|4930504E06Rik|AA562754|AA960384|AW561904|cI-40|mKIAA1390|ni","family with sequence similarity 63, member A","protein-coding"]
[1577,"chr18",53245230,53245920,"+",0,"NA","promoter-TSS (NM_029394)","promoter-TSS (NM_029394)",-87,"NM_029394",69226,"Mm.32414","NM_029394","ENSMUSG00000024535","Snx24","2810011K15Rik|5730433I16Rik|AI451341","sorting nexing 24","protein-coding"]
[1572,"chr18",42394297,42394786,"+",0,"NA","promoter-TSS (NM_138945)","promoter-TSS (NM_138945)",-56,"NM_138945",18998,"Mm.488204","NM_138945",null,"Pou4f3","Brn3.1|Brn3c|ddl|dreidel","POU domain, class 4, transcription factor 3","protein-coding"]
[2851,"chr6",128437617,128438838,"+",0,"NA","promoter-TSS (NR_028593)","promoter-TSS (NR_028593)",404,"NM_010219",14228,"Mm.12758","NM_010219","ENSMUSG00000030357","Fkbp4","59kDa|AL022792|AW208983|FKBP-4|FKBP-52|FKBP52|FKPB52|p59","FK506 binding protein 4","protein-coding"]
[3129,"chr8",22859457,22860372,"+",0,"NA","intron (NM_001081149, intron 1 of 17)","CpG",375,"NM_001081149",244349,"Mm.182776","NM_001081149","ENSMUSG00000031540","Kat6a","1500036M03|9930021N24Rik|MOZ|Myst3|Zfp220","K(lysine) acetyltransferase 6A","protein-coding"]
[689,"chr11",119389866,119390808,"+",0,"NA","promoter-TSS (NR_035453)","promoter-TSS (NR_035453)",-135,"NR_035453",100316690,null,"NR_035453","ENSMUSG00000088015","Mir1932","mir-1932|mmu-mir-1932","microRNA 1932","ncRNA"]
[886,"chr13",48261253,48262613,"+",0,"NA","exon (NM_031166, exon 1 of 3)","exon (NM_031166, exon 1 of 3)",506,"NM_031166",15904,"Mm.458006","NM_031166","ENSMUSG00000021379","Id4","Idb4|bHLHb27","inhibitor of DNA binding 4","protein-coding"]
[3462,"chr9",108002590,108003225,"+",0,"NA","intron (NM_013785, intron 1 of 5)","CpG",259,"NM_013785",27399,"Mm.276155","NM_013785","ENSMUSG00000032594","Ip6k1","1200016D08Rik|AU022776|Ihpk1|InsP6|InsP6k1|Itpk6","inositol hexaphosphate kinase 1","protein-coding"]
[1116,"chr15",59648577,59649683,"+",0,"NA","5' UTR (NM_144549, exon 1 of 3)","5' UTR (NM_144549, exon 1 of 3)",476,"NM_144549",211770,"Mm.40298","NM_144549","ENSMUSG00000032501","Trib1","A530090O15Rik|TRB-1|Trb1","tribbles homolog 1 (Drosophila)","protein-coding"]
[2835,"chr6",119478915,119480223,"+",0,"NA","promoter-TSS (NM_133940)","promoter-TSS (NM_133940)",-99,"NM_133940",101358,"Mm.125477","NM_133940",null,"Fbxl14","AW322056|Fbx14l","F-box and leucine-rich repeat protein 14","protein-coding"]
[1329,"chr16",70313837,70314695,"+",0,"NA","exon (NM_028803, exon 1 of 16)","exon (NM_028803, exon 1 of 16)",317,"NM_028803",74185,"Mm.396102","NM_028803","ENSMUSG00000022707","Gbe1","2310045H19Rik|2810426P10Rik|D16Ertd536e","glucan (1,4-alpha-), branching enzyme 1","protein-coding"]
[2869,"chr7",4739881,4740495,"+",0,"NA","promoter-TSS (NM_001115018)","promoter-TSS (NM_001115018)",61,"NM_001115018",232811,"Mm.247844","NM_146177","ENSMUSG00000059851","Suv420h2","BC024816|KMT5C|Suv4-20h2","suppressor of variegation 4-20 homolog 2 (Drosophila)","protein-coding"]
[1725,"chr19",38836424,38837642,"+",0,"NA","exon (NM_145952, exon 1 of 13)","exon (NM_145952, exon 1 of 13)",454,"NM_145952",209478,"Mm.391153","NM_145952","ENSMUSG00000048720","Tbc1d12","BC033574","TBC1D12: TBC1 domain family, member 12","protein-coding"]
[2379,"chr4",133518696,133519554,"+",0,"NA","intron (NM_001083916, intron 1 of 3)","CpG",162,"NM_133707",69073,"Mm.299081","NM_133707","ENSMUSG00000037600","Kdf1","1810019J16Rik","keratinocyte differentiation factor 1","protein-coding"]
[727,"chr12",10390647,10391412,"+",0,"NA","TTS (NM_027588)","TTS (NM_027588)",249,"NM_023697",105014,"Mm.119343","NM_023697","ENSMUSG00000020621","Rdh14","3110030G19Rik|AW215439|PAN2","retinol dehydrogenase 14 (all-trans and 9-cis)","protein-coding"]
[3243,"chr8",106210374,106211623,"+",0,"NA","promoter-TSS (NM_001007567)","promoter-TSS (NM_001007567)",-56,"NM_145404",214572,"Mm.251804","NM_145404",null,"Prmt7","4933402B05Rik|BC006705","protein arginine N-methyltransferase 7","protein-coding"]
[320,"chr10",88378942,88379752,"+",0,"NA","promoter-TSS (NM_001004164)","promoter-TSS (NM_001004164)",-65,"NM_001004164",432486,"Mm.335190","NM_001004164","ENSMUSG00000035311","Gnptab","EG432486|mKIAA1208","N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits","protein-coding"]
[939,"chr13",94057128,94058248,"+",0,"NA","promoter-TSS (NM_172589)","promoter-TSS (NM_172589)",-108,"NM_172589",218454,"Mm.316553","NM_172589","ENSMUSG00000045312","Lhfpl2","6030465B15|AI447312|AW050335|mKIAA0206|vgim","lipoma HMGIC fusion partner-like 2","protein-coding"]
[2619,"chr5",120511008,120511579,"+",0,"NA","intron (NM_133221, intron 1 of 15)","CpG",101,"NM_001177594",170756,"Mm.291070","NM_133221","ENSMUSG00000032754","Slc8b1","AF261233|NCKX6|NCLX|Slc24a6","solute carrier family 8 (sodium/lithium/calcium exchanger), member B1","protein-coding"]
[811,"chr12",105336567,105337632,"+",0,"NA","non-coding (NR_125773, exon 1 of 4)","non-coding (NR_125773, exon 1 of 4)",106,"NR_125773",69952,"Mm.158311","NR_045047","ENSMUSG00000097929","Tunar","2810011L19Rik|Tuna","Tcl1 upstream neural differentiation associated RNA","ncRNA"]
[1670,"chr19",6987692,6988289,"+",0,"NA","promoter-TSS (NM_011697)","promoter-TSS (NM_011697)",-339,"NM_011697",22340,"Mm.15607","NM_011697","ENSMUSG00000024962","Vegfb","VEGF-B|Vrf","vascular endothelial growth factor B","protein-coding"]
[2010,"chr2",156065098,156065704,"+",0,"NA","exon (NM_139151, exon 1 of 12)","exon (NM_139151, exon 1 of 12)",188,"NM_139151",245865,"Mm.330713","NM_139151","ENSMUSG00000038180","Spag4","1700041K21Rik|MNCb-0953|Sun4|mKIAA4118","sperm associated antigen 4","protein-coding"]
[2834,"chr6",118011135,118011990,"+",0,"NA","promoter-TSS (NM_001316749)","promoter-TSS (NM_001316749)",25,"NM_001316749",70727,"Mm.87660","NM_027526","ENSMUSG00000030134","Rasgef1a","6330404M18Rik|AI835194","RasGEF domain family, member 1A","protein-coding"]
[465,"chr11",61504573,61505444,"+",0,"NA","promoter-TSS (NM_013717)","promoter-TSS (NM_013717)",-164,"NM_013717",27078,"Mm.261226","NM_013717","ENSMUSG00000001039","B9d1","AW045994|B9|Eppb9","B9 protein domain 1","protein-coding"]
[249,"chr10",71347435,71348548,"+",0,"NA","exon (NM_027184, exon 1 of 6)","exon (NM_027184, exon 1 of 6)",198,"NM_027184",69718,"Mm.245867","NM_027184","ENSMUSG00000060733","Ipmk","2410017C19Rik|AA408208|Impk","inositol polyphosphate multikinase","protein-coding"]
[3342,"chr9",35210645,35211271,"+",0,"NA","promoter-TSS (NM_026130)","promoter-TSS (NM_026130)",97,"NM_172291",235169,"Mm.138512","NM_172291","ENSMUSG00000039048","Foxred1","BC024806|TEG-23|Tex23","FAD-dependent oxidoreductase domain containing 1","protein-coding"]
[1612,"chr18",76241232,76242441,"+",0,"NA","5' UTR (NM_010754, exon 1 of 11)","5' UTR (NM_010754, exon 1 of 11)",135,"NM_010754",17126,"Mm.152699","NM_010754",null,"Smad2","7120426M23Rik|Madh2|Madr2|Smad-2|mMad2","SMAD family member 2","protein-coding"]
[819,"chr12",108554620,108555545,"+",0,"NA","5' UTR (NM_001163394, exon 1 of 14)","5' UTR (NM_001163394, exon 1 of 14)",362,"NM_007965",14026,"Mm.238841","NM_007965","ENSMUSG00000021262","Evl","AI528774","Ena-vasodilator stimulated phosphoprotein","protein-coding"]
[1177,"chr15",82146765,82148251,"+",0,"NA","intron (NM_033218, intron 1 of 18)","CpG",239,"NM_033218",20788,"Mm.9002","NM_033218","ENSMUSG00000022463","Srebf2","AI608257|SREBP-2|SREBP2|SREBP2gc|bHLHd2|lop13|nuc","sterol regulatory element binding factor 2","protein-coding"]
[1189,"chr15",85734797,85736203,"+",0,"NA","promoter-TSS (NM_001113418)","promoter-TSS (NM_001113418)",-64,"NM_001113418",19013,"Mm.212789","NM_011144",null,"Ppara","4933429D07Rik|AW742785|Nr1c1|PPAR-alpha|PPARalpha|Ppar","peroxisome proliferator activated receptor alpha","protein-coding"]
[1127,"chr15",75746291,75748355,"+",0,"NA","exon (NM_194350, exon 1 of 1)","exon (NM_194350, exon 1 of 1)",599,"NM_194350",378435,"Mm.309589","NM_194350","ENSMUSG00000047591","Mafa","RIPE3b1","v-maf musculoaponeurotic fibrosarcoma oncogene family, protein A (avian)","protein-coding"]
[1537,"chr18",14782967,14783986,"+",0,"NA","5' UTR (NM_001100449, exon 1 of 15)","5' UTR (NM_001100449, exon 1 of 15)",231,"NM_001100449",72504,"Mm.312233","NM_001100449","ENSMUSG00000054321","Taf4b","105kDa|2610524B04Rik|4932409F03Rik|AW987595|TAFII-105|TAFII105|Taf2c2","TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor","protein-coding"]
[894,"chr13",51408521,51409054,"+",0,"NA","5' UTR (NM_010101, exon 1 of 2)","5' UTR (NM_010101, exon 1 of 2)",169,"NM_010101",13610,"Mm.136736","NM_010101","ENSMUSG00000067586","S1pr3","AI132464|Edg3|Lpb3|S1p3","sphingosine-1-phosphate receptor 3","protein-coding"]
[1748,"chr19",46396833,46397438,"+",0,"NA","exon (NM_001025391, exon 1 of 12)","exon (NM_001025391, exon 1 of 12)",239,"NM_015752",24069,"Mm.41210","NM_015752","ENSMUSG00000025231","Sufu","Su(fu)","suppressor of fused homolog (Drosophila)","protein-coding"]
[3425,"chr9",83548132,83548774,"+",0,"NA","5' UTR (NM_172507, exon 1 of 4)","5' UTR (NM_172507, exon 1 of 4)",115,"NM_172507",212531,"Mm.491246","NM_172507",null,"Sh3bgrl2","A930014C21Rik|AA408038|B930089I21","SH3 domain binding glutamic acid-rich protein like 2","protein-coding"]
[2127,"chr3",69004721,69005688,"+",0,"NA","promoter-TSS (NM_026641)","promoter-TSS (NM_026641)",232,"NM_133786",70099,"Mm.206841","NM_133786","ENSMUSG00000034349","Smc4","2500002A22Rik|C79747|SMC-4|Smc4l1","structural maintenance of chromosomes 4","protein-coding"]
[858,"chr13",19622992,19623893,"+",0,"NA","exon (NM_016687, exon 1 of 6)","exon (NM_016687, exon 1 of 6)",267,"NM_016687",20379,"Mm.42095","NM_016687","ENSMUSG00000021319","Sfrp4","-","secreted frizzled-related protein 4","protein-coding"]
[1298,"chr16",32277350,32278081,"+",0,"NA","5' UTR (NM_027355, exon 1 of 6)","5' UTR (NM_027355, exon 1 of 6)",254,"NM_027355",70238,"Mm.228263","NM_027355","ENSMUSG00000014074","Rnf168","3110001H15Rik","ring finger protein 168","protein-coding"]
[140,"chr1",156558365,156559204,"+",0,"NA","promoter-TSS (NM_009595)","promoter-TSS (NM_009595)",-3,"NM_009595",11352,"Mm.329515","NM_009595","ENSMUSG00000026596","Abl2","AA536808|Abll|Arg","v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)","protein-coding"]
[2222,"chr3",157533937,157534662,"+",0,"NA","promoter-TSS (NM_017381)","promoter-TSS (NM_017381)",-98,"NM_017381",53861,"Mm.259036","NM_017381","ENSMUSG00000028180","Zranb2","AI227013|Zfp265|Zis|Znf265","zinc finger, RAN-binding domain containing 2","protein-coding"]
[1900,"chr2",74681904,74682685,"+",0,"NA","promoter-TSS (NM_008273)","promoter-TSS (NM_008273)",-29,"NM_008273",15431,"Mm.207763","NM_008273","ENSMUSG00000042499","Hoxd11","E230017H14Rik|Hox-4.6|Hox-5.4|Hox-5.5","homeobox D11","protein-coding"]
[3460,"chr9",107887893,107888702,"+",0,"NA","5' UTR (NM_028369, exon 1 of 6)","5' UTR (NM_028369, exon 1 of 6)",168,"NM_028369",72825,"Mm.38037","NM_028369","ENSMUSG00000032583","Mon1a","2810468K17Rik","MON1 homolog A (yeast)","protein-coding"]
[385,"chr11",5955483,5956119,"+",0,"NA","promoter-TSS (NM_019661)","promoter-TSS (NM_019661)",43,"NM_019661",56418,"Mm.294821","NM_019661","ENSMUSG00000002741","Ykt6","0610042I15Rik|1810013M05Rik|AW105923","YKT6 homolog (S. Cerevisiae)","protein-coding"]
[954,"chr13",112463610,112464659,"+",0,"NA","promoter-TSS (NM_010560)","promoter-TSS (NM_010560)",64,"NM_010560",16195,"Mm.4364","NM_010560","ENSMUSG00000021756","Il6st","5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130","interleukin 6 signal transducer","protein-coding"]
[1359,"chr17",13007647,13008523,"+",0,"NA","intron (NM_013671, intron 1 of 4)","CpG",246,"NM_013671",20656,"Mm.290876","NM_013671","ENSMUSG00000006818","Sod2","MnSOD|Sod-2","superoxide dismutase 2, mitochondrial","protein-coding"]
[1479,"chr17",47736952,47737748,"+",0,"NA","promoter-TSS (NM_001161723)","promoter-TSS (NM_001161723)",313,"NM_001161722",21425,"Mm.2305","NM_011549","ENSMUSG00000023990","Tfeb","Tcfeb|bHLHe35","transcription factor EB","protein-coding"]
[2578,"chr5",107403243,107404043,"+",0,"NA","exon (NM_001001804, exon 1 of 7)","exon (NM_001001804, exon 1 of 7)",130,"NM_001001804",384214,"Mm.489863","NM_001001804","ENSMUSG00000033805","Ephx4","Abhd7|Ephxrp|Gm1382","epoxide hydrolase 4","protein-coding"]
[801,"chr12",100199898,100201124,"+",0,"NA","intron (NM_001313934, intron 1 of 5)","CpG",367,"NM_001313934",12313,"Mm.285993","NM_009790","ENSMUSG00000001175","Calm1","AI256814|AI327027|AI461935|AL024000|CaM|Calm","calmodulin 1","protein-coding"]
[985,"chr14",27038812,27039431,"+",0,"NA","exon (NM_134437, exon 1 of 13)","exon (NM_134437, exon 1 of 13)",120,"NM_134437",171463,"Mm.206726","NM_027265","ENSMUSG00000040717","Il17rd","2810004A10Rik|AI428510|Sef|Sef-S","interleukin 17 receptor D","protein-coding"]
[971,"chr14",16364937,16366148,"+",0,"NA","5' UTR (NM_009409, exon 1 of 36)","5' UTR (NM_009409, exon 1 of 36)",336,"NM_009409",21974,"Mm.130362","NM_009409","ENSMUSG00000017485","Top2b","D230016L12Rik|Top-2","topoisomerase (DNA) II beta","protein-coding"]
[754,"chr12",69892451,69893412,"+",0,"NA","promoter-TSS (NM_178628)","promoter-TSS (NM_178628)",-174,"NM_178628",73991,"Mm.474462","NM_178628","ENSMUSG00000021066","Atl1","4930435M24Rik|Adfsp|Fsp1|Spg3|Spg3a","atlastin GTPase 1","protein-coding"]
[3151,"chr8",60993115,60993853,"+",0,"NA","5' UTR (NM_001293637, exon 1 of 35)","5' UTR (NM_001293637, exon 1 of 35)",291,"NM_175089",18004,"Mm.486881","NM_175089","ENSMUSG00000031644","Nek1","D8Ertd790e|kat","NIMA (never in mitosis gene a)-related expressed kinase 1","protein-coding"]
[479,"chr11",68967617,68968258,"+",0,"NA","promoter-TSS (NM_028048)","promoter-TSS (NM_028048)",-194,"NM_028048",71998,"Mm.298622","NM_028048","ENSMUSG00000018740","Slc25a35","1810012H11Rik","solute carrier family 25, member 35","protein-coding"]
[847,"chr12",113139831,113140530,"+",0,"NA","promoter-TSS (NM_024223)","promoter-TSS (NM_024223)",-56,"NM_024223",68337,"Mm.133825","NM_024223","ENSMUSG00000006356","Crip2","0610010I23Rik|AW743261|C77570|CRP2|CRP4|Crp|ESP1|Hlp","cysteine rich protein 2","protein-coding"]
[1166,"chr15",79741849,79742911,"+",0,"NA","promoter-TSS (NR_045069)","promoter-TSS (NR_045069)",156,"NM_194342",223697,"Mm.202715","NM_194342","ENSMUSG00000042524","Sun2","B230369L08Rik|C030011B15|Unc84b","Sad1 and UNC84 domain containing 2","protein-coding"]
[3061,"chr7",132711878,132712620,"+",0,"NA","3' UTR (NM_212473, exon 5 of 5)","3' UTR (NM_212473, exon 5 of 5)",74686,"NM_175268",77938,"Mm.225649","NM_175268","ENSMUSG00000030956","Fam53b","A930008G19Rik|mKIAA0140","family with sequence similarity 53, member B","protein-coding"]
[3091,"chr7",142471387,142472088,"+",0,"NA","promoter-TSS (NM_019391)","promoter-TSS (NM_019391)",-106,"NM_001271508",16985,"Mm.234003","NM_019391","ENSMUSG00000018819","Lsp1","Lsp-1|WP34|p50|pp52","lymphocyte specific 1","protein-coding"]
[2166,"chr3",99140882,99141560,"+",0,"NA","intron (NM_027462, intron 1 of 5)","CpG",131,"NM_027462",70560,"Mm.316754","NM_027462","ENSMUSG00000004233","Wars2","5730427B17Rik|9430020O07Rik|AI413375|TrpRS","tryptophanyl tRNA synthetase 2 (mitochondrial)","protein-coding"]
[1563,"chr18",36678861,36679482,"+",0,"NA","promoter-TSS (NM_001083317)","promoter-TSS (NM_001083317)",-44,"NM_001083317",67843,"Mm.273350","NM_026404","ENSMUSG00000033272","Slc35a4","2610030J16Rik","solute carrier family 35, member A4","protein-coding"]
[1003,"chr14",32856575,32857263,"+",0,"NA","exon (NM_178791, exon 1 of 8)","exon (NM_178791, exon 1 of 8)",163,"NM_178791",320736,"Mm.187910","NM_178791","ENSMUSG00000050666","Vstm4","E130203B14Rik","V-set and transmembrane domain containing 4","protein-coding"]
[1378,"chr17",24594075,24595871,"+",0,"NA","TTS (NM_011647)","TTS (NM_011647)",37654,"NM_011647",22084,"Mm.30435","NM_011647","ENSMUSG00000002496","Tsc2","Nafld|Tcs2","tuberous sclerosis 2","protein-coding"]
[1054,"chr14",74731901,74732758,"+",0,"NA","promoter-TSS (NM_016903)","promoter-TSS (NM_016903)",32,"NM_016903",13885,"Mm.38055","NM_016903","ENSMUSG00000021996","Esd","Es-10|Es10|FGH|sid478","esterase D/formylglutathione hydrolase","protein-coding"]
[1800,"chr2",25395394,25396467,"+",0,"NA","promoter-TSS (NM_009849)","promoter-TSS (NM_009849)",56,"NM_009849",12496,"Mm.482100","NM_009849","ENSMUSG00000015085","Entpd2","Cd39l1|NTPDase2","ectonucleoside triphosphate diphosphohydrolase 2","protein-coding"]
[2821,"chr6",113392282,113393014,"+",0,"NA","exon (NM_133923, exon 1 of 13)","exon (NM_133923, exon 1 of 13)",151,"NM_133923",101100,"Mm.388573","NM_133923","ENSMUSG00000030276","Ttll3","4833441J24Rik|AI450050","tubulin tyrosine ligase-like family, member 3","protein-coding"]
[2101,"chr3",40708462,40709109,"+",0,"NA","promoter-TSS (NM_178386)","promoter-TSS (NM_178386)",-86,"NM_178386",73333,"Mm.78691","NM_178386","ENSMUSG00000069041","Slc25a31","1700034J06Rik|Ant4|Sfec","solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31","protein-coding"]
[619,"chr11",101260544,101261175,"+",0,"NA","exon (NM_175638, exon 1 of 19)","exon (NM_175638, exon 1 of 19)",292,"NM_175638",69847,"Mm.23656","NM_175638","ENSMUSG00000035112","Wnk4","2010002J11Rik|Pha2b|Prkwnk4","WNK lysine deficient protein kinase 4","protein-coding"]
[1717,"chr19",32595487,32596317,"+",0,"NA","intron (NM_001201470, intron 1 of 11)","CpG",187,"NM_001201470",23972,"Mm.203916","NM_011864","ENSMUSG00000024899","Papss2","1810018P12Rik|AI159688|AtpsU2|Atpsk2|Sk2|bm","3'-phosphoadenosine 5'-phosphosulfate synthase 2","protein-coding"]
[2557,"chr5",91517418,91518517,"+",0,"NA","intron (NM_145562, intron 1 of 3)","CpG",267,"NM_145562",231440,"Mm.5002","NM_145562",null,"Parm1","2210012L08Rik|9130213B05Rik|W91666","prostate androgen-regulated mucin-like protein 1","protein-coding"]
[698,"chr11",120484442,120485258,"+",0,"NA","TTS (NM_008244)","TTS (NM_008244)",181,"NM_027204",56282,"Mm.133851","NM_027204",null,"Mrpl12","0610034O11Rik|1500031N16Rik|MRP-L12|Rpml12","mitochondrial ribosomal protein L12","protein-coding"]
[1634,"chr19",4839093,4840202,"+",0,"NA","promoter-TSS (NM_016892)","promoter-TSS (NM_016892)",281,"NM_207268",399599,"Mm.444704","NM_207268","ENSMUSG00000067872","Ccdc87","4931419P11Rik","coiled-coil domain containing 87","protein-coding"]
[621,"chr11",101442139,101442952,"+",0,"NA","intron (NM_011289, intron 1 of 4)","CpG",300,"NM_011289",19942,"Mm.340658","NM_011289","ENSMUSG00000063316","Rpl27","-","ribosomal protein L27","protein-coding"]
[524,"chr11",76201717,76202726,"+",0,"NA","exon (NM_027773, exon 1 of 5)","exon (NM_027773, exon 1 of 5)",165,"NM_027773",116972,"Mm.188413","NM_027773",null,"Fam57a","2310047D13Rik|4932415L08Rik|5430402E13Rik|5430420K21Rik|Wdt3","family with sequence similarity 57, member A","protein-coding"]
[2176,"chr3",106482352,106483146,"+",0,"NA","non-coding (NR_033207, exon 2 of 2)","non-coding (NR_033207, exon 2 of 2)",299,"NM_001278941",72121,"Mm.14816","NM_028110","ENSMUSG00000027901","Dennd2d","2010308M01Rik|AI451421","DENN/MADD domain containing 2D","protein-coding"]
[1848,"chr2",31950039,31950715,"+",0,"NA","promoter-TSS (NM_145144)","promoter-TSS (NM_145144)",74,"NM_145144",108897,"Mm.24838","NM_145144","ENSMUSG00000001864","Aif1l","2810003C17Rik|AI043124|C87647|Iba2","allograft inflammatory factor 1-like","protein-coding"]
[2714,"chr5",146832832,146833478,"+",0,"NA","5' UTR (NM_019647, exon 1 of 6)","5' UTR (NM_019647, exon 1 of 6)",265,"NM_019647",19933,"Mm.316592","NM_019647","ENSMUSG00000041453","Rpl21","8430440E03Rik|L21","ribosomal protein L21","protein-coding"]
[2310,"chr4",106621960,106623169,"+",0,"NA","exon (NM_177667, exon 1 of 7)","exon (NM_177667, exon 1 of 7)",115,"NM_177667",230576,"Mm.41945","NM_177667","ENSMUSG00000034919","Ttc22","4732467L16Rik","tetratricopeptide repeat domain 22","protein-coding"]
[3418,"chr9",75037633,75038362,"+",0,"NA","intron (NM_021548, intron 1 of 2)","CpG",265,"NM_021548",59046,"Mm.247837","NM_021548","ENSMUSG00000007656","Arpp19","19kDa|2700024H10Rik|ARPP-19|AW559096|Arpp12","cAMP-regulated phosphoprotein 19","protein-coding"]
[2495,"chr5",30949615,30950355,"+",0,"NA","promoter-TSS (NM_021304)","promoter-TSS (NM_021304)",-81,"NR_003522",57742,"Mm.389615","NM_021304","ENSMUSG00000006638","Abhd1","LABH-1|LABH1","abhydrolase domain containing 1","protein-coding"]
[598,"chr11",97744874,97745496,"+",0,"NA","promoter-TSS (NM_054051)","promoter-TSS (NM_054051)",288,"NR_106180",102466256,null,"NR_106180","ENSMUSG00000098919","Mir8102","Gm27795|mmu-mir-8102","microRNA 8102","ncRNA"]
[3395,"chr9",60712746,60713860,"+",0,"NA","exon (NM_026235, exon 1 of 3)","exon (NM_026235, exon 1 of 3)",182,"NM_026235",67557,"Mm.44546","NM_026235","ENSMUSG00000034839","Larp6","5430431G03Rik|AI552438|Achn","La ribonucleoprotein domain family, member 6","protein-coding"]
[3052,"chr7",128523285,128524520,"+",0,"NA","exon (NM_013863, exon 1 of 4)","exon (NM_013863, exon 1 of 4)",319,"NM_013863",29810,"Mm.84073","NM_013863","ENSMUSG00000030847","Bag3","AA407278|Bis|mg638","BCL2-associated athanogene 3","protein-coding"]
[2486,"chr5",29569018,29569892,"+",0,"NA","5' UTR (NM_133907, exon 1 of 23)","5' UTR (NM_133907, exon 1 of 23)",213,"NM_133907",100763,"Mm.137746","NM_133907","ENSMUSG00000039000","Ube3c","AI853514|mKIAA0010","ubiquitin protein ligase E3C","protein-coding"]
[2322,"chr4",115827807,115828628,"+",0,"NA","5' UTR (NM_175308, exon 1 of 4)","5' UTR (NM_175308, exon 1 of 4)",125,"NM_175308",100465,"Mm.35571","NM_175308","ENSMUSG00000028709","Mob3c","AW822253|D130076I06Rik|Mobkl2c","MOB kinase activator 3C","protein-coding"]
[780,"chr12",84285021,84285587,"+",0,"NA","promoter-TSS (NM_029880)","promoter-TSS (NM_029880)",8,"NM_001252626",77219,"Mm.246127","NM_029880","ENSMUSG00000072946","Ptgr2","1810016I24Rik|9130222H03Rik|9630002F03Rik|AI838763|B830026H24Rik|PGR-2|PRG-2|Zadh1","prostaglandin reductase 2","protein-coding"]
[2438,"chr4",152177455,152178743,"+",0,"NA","promoter-TSS (NM_133348)","promoter-TSS (NM_133348)",-1,"NM_133348",70025,"Mm.296191","NM_133348","ENSMUSG00000028937","Acot7","2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1","acyl-CoA thioesterase 7","protein-coding"]
[3334,"chr9",22411271,22411915,"+",0,"NA","promoter-TSS (NM_026739)","promoter-TSS (NM_026739)",16,"NM_026739",68283,"Mm.280669","NM_026739","ENSMUSG00000036411","9530077C05Rik","1110003N12Rik|Kiaa0895|mKIAA0895","RIKEN cDNA 9530077C05 gene","protein-coding"]
[3277,"chr8",119992059,119992818,"+",0,"NA","promoter-TSS (NM_030209)","promoter-TSS (NM_030209)",0,"NM_030209",78892,"Mm.264680","NM_030209","ENSMUSG00000031825","Crispld2","1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp","cysteine-rich secretory protein LCCL domain containing 2","protein-coding"]
[2317,"chr4",109406847,109407418,"+",0,"NA","promoter-TSS (NR_131195)","promoter-TSS (NR_131195)",32,"NM_153392",230603,"Mm.33091","NM_153392","ENSMUSG00000028555","Ttc39a","4922503N01Rik","tetratricopeptide repeat domain 39A","protein-coding"]
[3490,"chr9",119031650,119032512,"+",0,"NA","TTS (NR_029742)","TTS (NR_029742)",285,"NR_029742",387218,null,"NR_029742","ENSMUSG00000065513","Mir26a-1","Mirn26a|Mirn26a-1|miR-26a|mir-26a-1","microRNA 26a-1","ncRNA"]
[3246,"chr8",106870372,106871156,"+",0,"NA","intron (NM_008217, intron 1 of 3)","CpG",522,"NM_008217",15118,"Mm.56986","NM_008217","ENSMUSG00000031910","Has3","-","hyaluronan synthase 3","protein-coding"]
[240,"chr10",62920387,62921134,"+",0,"NA","exon (NM_175194, exon 1 of 9)","exon (NM_175194, exon 1 of 9)",127,"NM_175194",73132,"Mm.37457","NM_175194","ENSMUSG00000071253","Slc25a16","3110021G18Rik|GDA|GDC|HGT.1|ML7","solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16","protein-coding"]
[1433,"chr17",32035990,32037070,"+",0,"NA","exon (NM_028244, exon 1 of 16)","exon (NM_028244, exon 1 of 16)",368,"NM_028244",72462,"Mm.102761","NM_028244","ENSMUSG00000058392","Rrp1b","2600005C20Rik|D030064A17|Kiaa0179|mKIAA0179","ribosomal RNA processing 1 homolog B (S. cerevisiae)","protein-coding"]
[1666,"chr19",6906668,6907448,"+",0,"NA","intron (NM_012021, intron 5 of 5)","intron (NM_012021, intron 5 of 5)",2587,"NM_012021",54683,"Mm.279782","NM_012021",null,"Prdx5","AOEB166|AOPP|Pmp20|Prdx6|PrxV","peroxiredoxin 5","protein-coding"]
[2209,"chr3",145575970,145576787,"+",0,"NA","exon (NM_001081094, exon 1 of 10)","exon (NM_001081094, exon 1 of 10)",170,"NM_001081094",229937,"Mm.24586","NM_001081094","ENSMUSG00000074182","Znhit6","2410019A14Rik","zinc finger, HIT type 6","protein-coding"]
[230,"chr10",59221143,59223055,"+",0,"NA","promoter-TSS (NM_001024911)","promoter-TSS (NM_001024911)",177,"NM_172939",268301,"Mm.3036","NM_172939","ENSMUSG00000098188","Sowahc","4921515A04Rik|9430099J10Rik|Ankrd57|C820004L04Rik","sosondowah ankyrin repeat domain family member C","protein-coding"]
[115,"chr1",133130927,133132248,"+",0,"NA","5' UTR (NM_133819, exon 1 of 2)","5' UTR (NM_133819, exon 1 of 2)",421,"NM_133819",108954,"Mm.293628","NM_133819","ENSMUSG00000046062","Ppp1r15b","1810033K10Rik|AI606441|C530022L24Rik|CReP","protein phosphatase 1, regulatory (inhibitor) subunit 15b","protein-coding"]
[377,"chr11",4186440,4187553,"+",0,"NA","exon (NM_134023, exon 1 of 9)","exon (NM_134023, exon 1 of 9)",163,"NM_134023",103724,"Mm.28140","NM_134023","ENSMUSG00000034412","Tbc1d10a","AI447804|EPI64|Tbc1d10|mFLJ00288","TBC1 domain family, member 10a","protein-coding"]
[2374,"chr4",132973735,132974364,"+",0,"NA","promoter-TSS (NM_010208)","promoter-TSS (NM_010208)",-46,"NM_010208",14191,"Mm.271665","NM_010208","ENSMUSG00000028874","Fgr","-","Gardner-Rasheed feline sarcoma viral (Fgr) oncogene homolog","protein-coding"]
[2050,"chr2",167015185,167016016,"+",0,"NA","intron (NM_153065, intron 1 of 20)","intron (NM_153065, intron 1 of 20)",287,"NM_153065",228889,"Mm.295031","NM_153065","ENSMUSG00000017999","Ddx27","C86129","DEAD (Asp-Glu-Ala-Asp) box polypeptide 27","protein-coding"]
[602,"chr11",98682451,98683224,"+",0,"NA","exon (NM_009439, exon 1 of 12)","exon (NM_009439, exon 1 of 12)",283,"NM_009439",22123,"Mm.12194","NM_009439","ENSMUSG00000017221","Psmd3","AI255837|AntP91a|D11Bwg1349e|Psd3|Tstap91a","proteasome (prosome, macropain) 26S subunit, non-ATPase, 3","protein-coding"]
[922,"chr13",73466982,73467810,"+",0,"NA","promoter-TSS (NM_145376)","promoter-TSS (NM_145376)",13,"NM_145376",210992,"Mm.284649","NM_145376","ENSMUSG00000021608","Lpcat1","2900035H07Rik|Aytl2|BB137372|BC005662|C87117|LPCAT|rd11","lysophosphatidylcholine acyltransferase 1","protein-coding"]
[2319,"chr4",111414793,111415527,"+",0,"NA","non-coding (NR_033793, exon 1 of 6)","non-coding (NR_033793, exon 1 of 6)",154,"NM_026279",67621,"Mm.45533","NM_026279","ENSMUSG00000028545","Bend5","2310026E23Rik","BEN domain containing 5","protein-coding"]
[1311,"chr16",35983110,35983867,"+",0,"NA","5' UTR (NM_008465, exon 1 of 14)","5' UTR (NM_008465, exon 1 of 14)",125,"NM_008465",16646,"Mm.6952","NM_008465","ENSMUSG00000022905","Kpna1","AW494490|IPOA5|NPI1|Rch2|mSRP1","karyopherin (importin) alpha 1","protein-coding"]
[2741,"chr6",34780196,34781050,"+",0,"NA","5' UTR (NM_001289657, exon 1 of 19)","5' UTR (NM_001289657, exon 1 of 19)",191,"NM_001289656",76223,"Mm.150047","NM_178630","ENSMUSG00000038836","Agbl3","2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3","ATP/GTP binding protein-like 3","protein-coding"]
[2628,"chr5",122421948,122423375,"+",0,"NA","exon (NM_019805, exon 1 of 11)","exon (NM_019805, exon 1 of 11)",217,"NM_019805",56317,"Mm.37341","NM_019805","ENSMUSG00000029466","Anapc7","APC7|AW545589","anaphase promoting complex subunit 7","protein-coding"]
[1072,"chr14",106106038,106106894,"+",0,"NA","5' UTR (NM_198601, exon 1 of 1)","5' UTR (NM_198601, exon 1 of 1)",268,"NR_073203",212085,"Mm.78128","NM_198601","ENSMUSG00000022113","Trim52","4921513B05Rik","tripartite motif-containing 52","protein-coding"]
[2470,"chr5",20881438,20882678,"+",0,"NA","promoter-TSS (NM_177601)","promoter-TSS (NM_177601)",66,"NM_172992",68770,"Mm.86410","NM_172992","ENSMUSG00000039987","Phtf2","1110054G21Rik|9530062N20Rik|AI447096|C77923","putative homeodomain transcription factor 2","protein-coding"]
[1787,"chr2",18997295,18998667,"+",0,"NA","promoter-TSS (NR_024323)","promoter-TSS (NR_024323)",140,"NM_008845",18718,"Mm.313977","NM_008845","ENSMUSG00000026737","Pip4k2a","AW742916|Pip5k2a","phosphatidylinositol-5-phosphate 4-kinase, type II, alpha","protein-coding"]
[1394,"chr17",25471509,25472360,"+",0,"NA","exon (NM_027951, exon 1 of 6)","exon (NM_027951, exon 1 of 6)",344,"NM_027951",71840,"Mm.282330","NM_027951","ENSMUSG00000024175","Tekt4","1700010L19Rik","tektin 4","protein-coding"]
[612,"chr11",100713501,100714455,"+",0,"NA","exon (NM_029307, exon 1 of 1)","exon (NM_029307, exon 1 of 1)",128,"NM_029307",75482,"Mm.46175","NM_029307","ENSMUSG00000017832","Hspb9","1700007H20Rik","heat shock protein, alpha-crystallin-related, B9","protein-coding"]
[2772,"chr6",71271406,71272339,"+",0,"NA","promoter-TSS (NM_145568)","promoter-TSS (NM_145568)",-147,"NM_145568",57896,"Mm.250569","NM_145568","ENSMUSG00000053012","Krcc1","AA792894","lysine-rich coiled-coil 1","protein-coding"]
[936,"chr13",92844718,92845230,"+",0,"NA","intron (NM_001162945, intron 1 of 8)","CpG",187,"NM_001162945",382793,"Mm.296770","NM_001162945","ENSMUSG00000021704","Mtx3","4930470O13Rik|AA409304|AI853833|AU067765|EG624619|Gm1194|Gm6514","metaxin 3","protein-coding"]
[1391,"chr17",25188339,25189023,"+",0,"NA","promoter-TSS (NM_001290736)","promoter-TSS (NM_001290736)",-233,"NM_001290736",74154,"Mm.267353","NM_028789","ENSMUSG00000015127","Unkl","1300004G08Rik","unkempt-like (Drosophila)","protein-coding"]
[3456,"chr9",107546984,107547788,"+",0,"NA","promoter-TSS (NM_053253)","promoter-TSS (NM_053253)",76,"NM_053253",114602,"Mm.28331","NM_053253","ENSMUSG00000010044","Zmynd10","Blu","zinc finger, MYND domain containing 10","protein-coding"]
[2251,"chr4",41464465,41465373,"+",0,"NA","promoter-TSS (NM_024241)","promoter-TSS (NM_024241)",-71,"NM_024241",109242,"Mm.370288","NM_024241","ENSMUSG00000028438","Kif24","4933425J19Rik|9430029L23Rik","kinesin family member 24","protein-coding"]
[1277,"chr16",18498248,18499293,"+",0,"NA","promoter-TSS (NM_023120)","promoter-TSS (NM_023120)",57,"NM_001285491",13972,"Mm.236139","NM_023120","ENSMUSG00000000884","Gnb1l","ESTM55|Gm16314|Me49f07|OTTMUSG00000033458|Wdr14|Wdvcf","guanine nucleotide binding protein (G protein), beta polypeptide 1-like","protein-coding"]
[1086,"chr15",9140291,9141061,"+",0,"NA","promoter-TSS (NM_013787)","promoter-TSS (NM_013787)",106,"NM_177178",320506,"Mm.259886","NM_177178",null,"Lmbrd2","9930036E21Rik","LMBR1 domain containing 2","protein-coding"]
[2794,"chr6",87730586,87731564,"+",0,"NA","exon (NM_001159697, exon 1 of 8)","exon (NM_001159697, exon 1 of 8)",206,"NM_001159697",58229,"Mm.333229","NM_021418","ENSMUSG00000068263","Efcc1","Ccdc48","EF hand and coiled-coil domain containing 1","protein-coding"]
[701,"chr11",120542618,120543718,"+",0,"NA","3' UTR (NM_001033231, exon 5 of 5)","3' UTR (NM_001033231, exon 5 of 5)",6559,"NM_001033231",192173,"Mm.262300","NM_001033231","ENSMUSG00000061111","Fam195b","-","family with sequence similarity 195, member B","protein-coding"]
[214,"chr10",41489899,41490748,"+",0,"NA","promoter-TSS (NM_009213)","promoter-TSS (NM_009213)",17,"NM_009213",20598,"Mm.953","NM_009213","ENSMUSG00000019822","Smpd2","AW108287|nSMase|nSMase1","sphingomyelin phosphodiesterase 2, neutral","protein-coding"]
[564,"chr11",85234388,85235329,"+",0,"NA","promoter-TSS (NR_028329)","promoter-TSS (NR_028329)",262,"NM_025825",66884,"Mm.271997","NM_025825",null,"Appbp2","1300003O07Rik|AI465480|PAT1","amyloid beta precursor protein (cytoplasmic tail) binding protein 2","protein-coding"]
[3070,"chr7",139580869,139581951,"+",0,"NA","non-coding (NR_027857, exon 3 of 4)","non-coding (NR_027857, exon 3 of 4)",1387,"NM_183248",14912,"Mm.28308","NM_183248","ENSMUSG00000041309","Nkx6-2","Gtx|Nkx6.2","NK6 homeobox 2","protein-coding"]
[2708,"chr5",144100144,144100829,"+",0,"NA","promoter-TSS (NM_001081109)","promoter-TSS (NM_001081109)",50,"NM_001081109",231876,"Mm.288726","NM_001081109","ENSMUSG00000038970","Lmtk2","2900041G10Rik|A330101P12Rik|BREK|KPI-2|KPI2|aatyk2|cprk","lemur tyrosine kinase 2","protein-coding"]
[2562,"chr5",96373458,96374884,"+",0,"NA","5' UTR (NM_175473, exon 1 of 74)","5' UTR (NM_175473, exon 1 of 74)",216,"NM_175473",231470,"Mm.291120","NM_175473","ENSMUSG00000034687","Fras1","E130113P14Rik|bl|mKIAA1500","Fraser syndrome 1 homolog (human)","protein-coding"]
[3094,"chr7",143052401,143053622,"+",0,"NA","exon (NM_133655, exon 1 of 8)","exon (NM_133655, exon 1 of 8)",261,"NM_133655",12520,"Mm.806","NM_133655","ENSMUSG00000037706","Cd81","Tapa-1|Tapa1|Tspan28","CD81 antigen","protein-coding"]
[2789,"chr6",86028560,86029320,"+",0,"NA","5' UTR (NM_001271860, exon 1 of 13)","5' UTR (NM_001271860, exon 1 of 13)",259,"NM_001271860",11519,"Mm.104155","NM_013458","ENSMUSG00000030000","Add2","2900072M03Rik|add97","adducin 2 (beta)","protein-coding"]
[1650,"chr19",5824492,5824960,"+",0,"NA","TTS (NR_131212)","TTS (NR_131212)",20752,"NR_131212",66961,"Mm.281895","NR_003513",null,"Neat1","2310043N10Rik|VINC","nuclear paraspeckle assembly transcript 1 (non-protein coding)","ncRNA"]
[2074,"chr2",180385049,180385773,"+",0,"NA","promoter-TSS (NR_045331)","promoter-TSS (NR_045331)",-193,"NR_045331",622283,"Mm.447602","NR_045331",null,"Gm6307","EG622283","predicted gene 6307","ncRNA"]
[2539,"chr5",66259788,66260492,"+",0,"NA","promoter-TSS (NM_027602)","promoter-TSS (NM_027602)",242,"NM_001302834",70918,"Mm.23166","NM_027602","ENSMUSG00000029206","Nsun7","4921525L17Rik","NOL1/NOP2/Sun domain family, member 7","protein-coding"]
[2850,"chr6",127453371,127454025,"+",0,"NA","promoter-TSS (NM_181402)","promoter-TSS (NM_181402)",-25,"NM_181402",101187,"Mm.110818","NM_181402","ENSMUSG00000037997","Parp11","5330431N24Rik|AI851877|ARTD11|HIN1L","poly (ADP-ribose) polymerase family, member 11","protein-coding"]
[2547,"chr5",74092749,74093431,"+",0,"NA","promoter-TSS (NR_015531)","promoter-TSS (NR_015531)",7,"NR_015531",70036,"Mm.46547","NR_015531","ENSMUSG00000053656","Dancr","2700023E23Rik","differentiation antagonizing non-protein coding RNA","ncRNA"]
[731,"chr12",24707807,24708779,"+",0,"NA","promoter-TSS (NM_009104)","promoter-TSS (NM_009104)",39,"NM_009104",20135,"Mm.99","NM_009104","ENSMUSG00000020649","Rrm2","AA407299|R2","ribonucleotide reductase M2","protein-coding"]
[1967,"chr2",128698782,128699571,"+",0,"NA","intron (NM_008587, intron 1 of 18)","intron (NM_008587, intron 1 of 18)",179,"NM_008587",17289,"Mm.239655","NM_008587","ENSMUSG00000014361","Mertk","Eyk|Mer|Nyk|nmf12","c-mer proto-oncogene tyrosine kinase","protein-coding"]
[2779,"chr6",83101215,83102343,"+",0,"NA","exon (NM_001081266, exon 1 of 9)","exon (NM_001081266, exon 1 of 9)",263,"NM_001081266",243510,"Mm.436553","NM_001081266","ENSMUSG00000079511","Ccdc142","A230058J24Rik","coiled-coil domain containing 142","protein-coding"]
[657,"chr11",115153172,115154525,"+",0,"NA","promoter-TSS (NM_021411)","promoter-TSS (NM_021411)",-330,"NM_021411",58222,"Mm.143789","NM_021411","ENSMUSG00000020732","Rab37","B230331O03Rik|B230354I04Rik","RAB37, member RAS oncogene family","protein-coding"]
[2139,"chr3",88482950,88484131,"+",0,"NA","intron (NM_019390, intron 9 of 9)","intron (NM_019390, intron 9 of 9)",9772,"NM_019390",16905,"Mm.243014","NM_019390","ENSMUSG00000028063","Lmna","Dhe","lamin A","protein-coding"]
[1865,"chr2",35256161,35256907,"+",0,"NA","intron (NM_001206368, intron 1 of 16)","CpG",175,"NM_001206368",227753,"Mm.443","NM_146120","ENSMUSG00000026879","Gsn","ADF","gelsolin","protein-coding"]
[1783,"chr2",16356039,16356581,"+",0,"NA","promoter-TSS (NM_026162)","promoter-TSS (NM_026162)",6,"NM_026162",67448,"Mm.313938","NM_026162","ENSMUSG00000026748","Plxdc2","1200007L24Rik|5430431D22Rik|AI646728|AU022916|AV231634|Tem7r","plexin domain containing 2","protein-coding"]
[768,"chr12",78225753,78227525,"+",0,"NA","promoter-TSS (NM_172952)","promoter-TSS (NM_172952)",-16,"NM_172952",268566,"Mm.341742","NM_145965","ENSMUSG00000047454","Gphn","5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph","gephyrin","protein-coding"]
[1928,"chr2",103566012,103567638,"+",0,"NA","exon (NM_178890, exon 1 of 17)","exon (NM_178890, exon 1 of 17)",515,"NM_178890",99382,"Mm.35850","NM_178890","ENSMUSG00000032724","Abtb2","AW539457|BPOZ-2","ankyrin repeat and BTB (POZ) domain containing 2","protein-coding"]
[1092,"chr15",25983963,25985269,"+",0,"NA","exon (NM_144523, exon 1 of 6)","exon (NM_144523, exon 1 of 6)",250,"NM_144523",52521,"Mm.29145","NM_144523","ENSMUSG00000052253","Zfp622","1110033B05Rik|D15Ertd806e|ZPR9|Znf622","zinc finger protein 622","protein-coding"]
[503,"chr11",72214734,72215828,"+",0,"NA","5' UTR (NM_026068, exon 1 of 4)","5' UTR (NM_026068, exon 1 of 4)",143,"NM_001163728",75304,"Mm.340776","NM_001163728",null,"4930563E22Rik","-","RIKEN cDNA 4930563E22 gene","protein-coding"]
[2255,"chr4",43381523,43382286,"+",0,"NA","promoter-TSS (NM_001037709)","promoter-TSS (NM_001037709)",-78,"NM_001037709",100213,"Mm.235730","NM_199057","ENSMUSG00000035969","Rusc2","AI840675|mKIAA0375","RUN and SH3 domain containing 2","protein-coding"]
[1756,"chr19",53310307,53311000,"+",0,"NA","5' UTR (NM_001008542, exon 1 of 6)","5' UTR (NM_001008542, exon 1 of 6)",147,"NM_001008542",17859,"Mm.2154","NM_010847","ENSMUSG00000025025","Mxi1","ENSMUSG00000067085|Gm10197|Mad2|bHLHc11","MAX interactor 1, dimerization protein","protein-coding"]
[1636,"chr19",4878217,4879134,"+",0,"NA","promoter-TSS (NM_027476)","promoter-TSS (NM_027476)",7,"NM_001168516",70605,"Mm.36885","NM_027476","ENSMUSG00000006463","Zdhhc24","5730496N17Rik|Leng4","zinc finger, DHHC domain containing 24","protein-coding"]
[2491,"chr5",30711241,30712096,"+",0,"NA","promoter-TSS (NM_023047)","promoter-TSS (NM_023047)",-227,"NM_023047",65254,"Mm.27732","NM_023047","ENSMUSG00000029168","Dpysl5","CRAM|CRMP-5|Crmp5","dihydropyrimidinase-like 5","protein-coding"]
[1483,"chr17",55445196,55446138,"+",0,"NA","promoter-TSS (NM_172829)","promoter-TSS (NM_172829)",-50,"NM_172829",240119,"Mm.311687","NM_172829","ENSMUSG00000024172","St6gal2","C230064G14Rik|St6galII|mKIAA1877","beta galactoside alpha 2,6 sialyltransferase 2","protein-coding"]
[338,"chr10",105841063,105841898,"+",0,"NA","promoter-TSS (NM_207522)","promoter-TSS (NM_207522)",1,"NM_025602",52713,"Mm.339224","NM_025602",null,"Ccdc59","2300004H16Rik|D10Ertd718e","coiled-coil domain containing 59","protein-coding"]
[3105,"chr8",4613027,4613709,"+",0,"NA","intron (NM_145591, intron 1 of 3)","intron (NM_145591, intron 1 of 3)",198,"NM_145591",233987,"Mm.102799","NM_145591",null,"Zfp958","-","zinc finger protein 958","protein-coding"]
[576,"chr11",88718417,88719117,"+",0,"NA","promoter-TSS (NM_054043)","promoter-TSS (NM_054043)",124,"NR_038058",193280,"Mm.396842","NR_038058",null,"C030037D09Rik","9330160M04","RIKEN cDNA C030037D09 gene","ncRNA"]
[761,"chr12",74283909,74284654,"+",0,"NA","promoter-TSS (NR_030735)","promoter-TSS (NR_030735)",5,"NR_030735",74284,"Mm.287421","NR_030733","ENSMUSG00000071265","1700086L19Rik","1700006L05Rik|AU016007","RIKEN cDNA 1700086L19 gene","ncRNA"]
[1996,"chr2",151910906,151911860,"+",0,"NA","promoter-TSS (NM_009641)","promoter-TSS (NM_009641)",51,"NM_009641",11602,"Mm.189536","NM_009641",null,"Angpt4","Agpt4|Ang3","angiopoietin 4","protein-coding"]
[738,"chr12",31265220,31266340,"+",0,"NA","intron (NM_008482, intron 1 of 32)","CpG",486,"NM_008482",16777,"Mm.172674","NM_008482","ENSMUSG00000002900","Lamb1","C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1","laminin B1","protein-coding"]
[1775,"chr2",5137556,5138415,"+",0,"NA","exon (NM_028804, exon 1 of 3)","exon (NM_028804, exon 1 of 3)",209,"NM_028804",74186,"Mm.274715","NM_028804","ENSMUSG00000026676","Ccdc3","2310045O21Rik","coiled-coil domain containing 3","protein-coding"]
[1415,"chr17",28271645,28272392,"+",0,"NA","intron (NR_045427, intron 1 of 2)","intron (NR_045427, intron 1 of 2)",310,"NR_045427",69050,"Mm.486938","NR_045427","ENSMUSG00000002250","1810013A23Rik","-","RIKEN cDNA 1810013A23 gene","ncRNA"]
[484,"chr11",69098640,69099434,"+",0,"NA","promoter-TSS (NM_011065)","promoter-TSS (NM_011065)",81,"NM_011065",18626,"Mm.7373","NM_011065","ENSMUSG00000020893","Per1","Per|m-rigui|mPer1","period circadian clock 1","protein-coding"]
[3408,"chr9",69989240,69990069,"+",0,"NA","5' UTR (NM_001008238, exon 1 of 10)","5' UTR (NM_001008238, exon 1 of 10)",188,"NM_001008238",12175,"Mm.159777","NM_016787","ENSMUSG00000011958","Bnip2","5730523P12Rik|BNIP2beta|Nip21","BCL2/adenovirus E1B interacting protein 2","protein-coding"]
[2334,"chr4",123127111,123127916,"+",0,"NA","intron (NM_019489, intron 9 of 9)","intron (NM_019489, intron 9 of 9)",11265,"NM_181859",353371,"Mm.189660","NM_181859","ENSMUSG00000076438","Oxct2b","Scot-t2","3-oxoacid CoA transferase 2B","protein-coding"]
[1036,"chr14",60634413,60635239,"+",0,"NA","5' UTR (NM_001033272, exon 1 of 13)","5' UTR (NM_001033272, exon 1 of 13)",121,"NM_001033272",219140,"Mm.149776","NM_001033272","ENSMUSG00000021990","Spata13","C79050|ESTM11|X83327|mFLJ00298","spermatogenesis associated 13","protein-coding"]
[1078,"chr14",122475375,122476321,"+",0,"NA","promoter-TSS (NR_045046)","promoter-TSS (NR_045046)",464,"NM_009574",22772,"Mm.308936","NM_009574","ENSMUSG00000061524","Zic2","HPE5|Ku","zinc finger protein of the cerebellum 2","protein-coding"]
[1243,"chr16",8829922,8831224,"+",0,"NA","exon (NM_001081400, exon 1 of 4)","exon (NM_001081400, exon 1 of 4)",473,"NM_001081400",69053,"Mm.390868","NM_001081400","ENSMUSG00000022507","1810013L24Rik","1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903","RIKEN cDNA 1810013L24 gene","protein-coding"]
[2530,"chr5",53589873,53590387,"+",0,"NA","promoter-TSS (NM_001080927)","promoter-TSS (NM_001080927)",-216,"NM_009035",19664,"Mm.209292","NM_009035","ENSMUSG00000039191","Rbpj","AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh","recombination signal binding protein for immunoglobulin kappa J region","protein-coding"]
[3492,"chr9",119444751,119445269,"+",0,"NA","promoter-TSS (NM_001172136)","promoter-TSS (NM_001172136)",87,"NM_172456",208194,"Mm.101578","NM_172456","ENSMUSG00000042787","Exog","AW557704|ENGL-B|ENGL-a|Endogl1|Endogl2|Engl|Engla|Englb","endo/exonuclease (5'-3'), endonuclease G-like","protein-coding"]
[2065,"chr2",174327341,174328072,"+",0,"NA","promoter-TSS (NR_003258)","promoter-TSS (NR_003258)",-62,"NM_001310083",14683,"Mm.125770","NM_010309","ENSMUSG00000027523","Gnas","5530400H20Rik|A930027G11Rik|C130027O20Rik|GPSA|GSP|Galphas|Gnas1|Gnasxl|Gs-alpha|Gsa|Nesp|Nesp55|Nespl|Oed-Sml|Oedsml|P1|P2|P3|PHP1A|PHP1B|POH|SCG6","GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus","protein-coding"]
[1265,"chr16",17451676,17452708,"+",0,"NA","5' UTR (NM_007764, exon 1 of 3)","5' UTR (NM_007764, exon 1 of 3)",207,"NM_007764",12929,"Mm.21048","NM_007764",null,"Crkl","1110025F07Rik|AA589403|AI325100|Crkol","v-crk sarcoma virus CT10 oncogene homolog (avian)-like","protein-coding"]
[544,"chr11",78511954,78512871,"+",0,"NA","promoter-TSS (NM_199199)","promoter-TSS (NM_199199)",116,"NM_026389",67811,"Mm.197493","NM_026389","ENSMUSG00000001100","Poldip2","1300003F06Rik|Pdip38","polymerase (DNA-directed), delta interacting protein 2","protein-coding"]
[623,"chr11",102145269,102146017,"+",0,"NA","exon (NM_145829, exon 1 of 7)","exon (NM_145829, exon 1 of 7)",130,"NM_145829",217214,"Mm.31686","NM_145829","ENSMUSG00000048217","Nags","1700120E20Rik|argA","N-acetylglutamate synthase","protein-coding"]
[1512,"chr17",80289628,80290514,"+",0,"NA","promoter-TSS (NM_194269)","promoter-TSS (NM_194269)",-141,"NM_194269",378462,"Mm.45208","NM_194269","ENSMUSG00000045257","Morn2","Mopt","MORN repeat containing 2","protein-coding"]
[3253,"chr8",107292950,107293762,"+",0,"NA","promoter-TSS (NM_001286260)","promoter-TSS (NM_001286260)",-114,"NM_018823",54446,"Mm.390057","NM_018823","ENSMUSG00000003847","Nfat5","AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz","nuclear factor of activated T cells 5","protein-coding"]
[2956,"chr7",67952001,67952844,"+",0,"NA","5' UTR (NM_010513, exon 1 of 21)","5' UTR (NM_010513, exon 1 of 21)",165,"NM_010513",16001,"Mm.275742","NM_010513",null,"Igf1r","A330103N21Rik|CD221|D930020L01|IGF-1R|hyft","insulin-like growth factor I receptor","protein-coding"]
[1196,"chr15",89075436,89076204,"+",0,"NA","promoter-TSS (NM_026485)","promoter-TSS (NM_026485)",34,"NR_040417",69120,"Mm.276391","NR_040417","ENSMUSG00000087331","1810021B22Rik","-","RIKEN cDNA 1810021B22 gene","ncRNA"]
[1114,"chr15",59314620,59315572,"+",0,"NA","promoter-TSS (NM_009270)","promoter-TSS (NM_009270)",4,"NM_009270",20775,"Mm.296169","NM_009270","ENSMUSG00000022351","Sqle","AI323792","squalene epoxidase","protein-coding"]
[2389,"chr4",135920579,135921335,"+",0,"NA","TTS (NM_001305278)","TTS (NM_001305278)",231,"NM_024243",71665,"Mm.439940","NM_024243","ENSMUSG00000028673","Fuca1","0610006A03Rik|9530055J05Rik|Afuc|Fuca","fucosidase, alpha-L- 1, tissue","protein-coding"]
[2946,"chr7",55841965,55842669,"+",0,"NA","intron (NM_001164662, intron 1 of 30)","CpG",246,"NM_001164661",20430,"Mm.37249","NM_011370","ENSMUSG00000030447","Cyfip1","E030028J09Rik|P140SRA-1|P140sra1|Shyc|Sra-1|Sra1|l(7)1Rl|l71Rl|l7Rl1|mKIAA0068|pl-1","cytoplasmic FMR1 interacting protein 1","protein-coding"]
[2564,"chr5",100798118,100798809,"+",0,"NA","promoter-TSS (NM_026826)","promoter-TSS (NM_026826)",137,"NM_001081107",191578,"Mm.21469","NM_180984","ENSMUSG00000035266","Helq","AU021725|D430018E21Rik|Hel308","helicase, POLQ-like","protein-coding"]
[2382,"chr4",134468248,134469231,"+",0,"NA","intron (NM_019641, intron 1 of 4)","CpG",419,"NM_019641",16765,"Mm.378957","NM_019641","ENSMUSG00000028832","Stmn1","19k|Lag|Lap18|Op18|P18|P19|Pig|Pp17|Pp18|Pp19|Pr22|Smn","stathmin 1","protein-coding"]
[328,"chr10",94147629,94148596,"+",0,"NA","intron (NM_011629, intron 1 of 13)","CpG",181,"NM_011629",22025,"Mm.107483","NM_011629","ENSMUSG00000005897","Nr2c1","4831444H07Rik|80.3|Eenr|TR2|Tr2-11","nuclear receptor subfamily 2, group C, member 1","protein-coding"]
[239,"chr10",62107174,62107988,"+",0,"NA","TTS (NM_027251)","TTS (NM_027251)",3432,"NM_027251",69894,"Mm.294126","NM_027251","ENSMUSG00000020083","2010107G23Rik","AA545165","RIKEN cDNA 2010107G23 gene","protein-coding"]
[2635,"chr5",123394327,123395711,"+",0,"NA","exon (NM_133917, exon 1 of 17)","exon (NM_133917, exon 1 of 17)",221,"NM_177582",208104,"Mm.83277","NM_133917","ENSMUSG00000038342","Mlxip","AW228700|Mir|bHLHe36","MLX interacting protein","protein-coding"]
[122,"chr1",135146454,135147833,"+",0,"NA","intron (NM_026823, intron 1 of 6)","CpG",309,"NM_026823",68724,"Mm.174998","NM_026823","ENSMUSG00000026426","Arl8a","1110033P22Rik|Arl10b|gie2","ADP-ribosylation factor-like 8A","protein-coding"]
[269,"chr10",79716121,79717491,"+",0,"NA","exon (NM_008226, exon 1 of 8)","exon (NM_008226, exon 1 of 8)",172,"NM_008226",15166,"Mm.12956","NM_008226","ENSMUSG00000020331","Hcn2","BCNG2|HAC1|trls","hyperpolarization-activated, cyclic nucleotide-gated K+ 2","protein-coding"]
[628,"chr11",103101034,103101834,"+",0,"NA","promoter-TSS (NM_025988)","promoter-TSS (NM_025988)",224,"NM_152813",72469,"Mm.264743","NM_152813","ENSMUSG00000020937","Plcd3","2610205J15Rik|mKIAA1964","phospholipase C, delta 3","protein-coding"]
[878,"chr13",43398290,43398897,"+",0,"NA","exon (NM_023554, exon 1 of 8)","exon (NM_023554, exon 1 of 8)",217,"NM_023554",70078,"Mm.439927","NM_023554","ENSMUSG00000063200","Nol7","2210008F15Rik|5730556I21Rik|NOP27|RARG-1","nucleolar protein 7","protein-coding"]
[1223,"chr15",101174061,101174917,"+",0,"NA","intron (NM_007395, intron 1 of 8)","CpG",364,"NM_007395",11479,"Mm.308467","NM_007395",null,"Acvr1b","6820432J04|ActR-IB|ActRIB|Acvrlk4|Alk4|SKR2","activin A receptor, type 1B","protein-coding"]
[2277,"chr4",53825970,53826483,"+",0,"NA","intron (NM_028053, intron 1 of 5)","CpG",181,"NM_028053",52076,"Mm.27184","NM_028053","ENSMUSG00000028420","Tmem38b","1600017F22Rik|AA437809|AV051057|D4Ertd89e|TRIC-B|mg33b","transmembrane protein 38B","protein-coding"]
[363,"chr10",127642911,127643820,"+",0,"NA","intron (NM_009284, intron 1 of 21)","intron (NM_009284, intron 1 of 21)",379,"NM_009284",20852,"Mm.121721","NM_009284","ENSMUSG00000002147","Stat6","-","signal transducer and activator of transcription 6","protein-coding"]
[2353,"chr4",127077007,127077673,"+",0,"NA","promoter-TSS (NM_001285888)","promoter-TSS (NM_001285888)",-43,"NM_001285885",100177,"Mm.276096","NM_177462","ENSMUSG00000042408","Zmym6","9330177P20Rik|AI593204|AI661340|D4Wsu24e|Zfp258","zinc finger, MYM-type 6","protein-coding"]
[3198,"chr8",84832132,84832794,"+",0,"NA","promoter-TSS (NR_033145)","promoter-TSS (NR_033145)",181,"NM_183358",102060,"Mm.489649","NM_183358",null,"Gadd45gip1","2310040G17Rik|AI425883|Crif1|MRP-L59|Plinp1","growth arrest and DNA-damage-inducible, gamma interacting protein 1","protein-coding"]
[3215,"chr8",92674253,92675140,"+",0,"NA","5' UTR (NM_022428, exon 1 of 6)","5' UTR (NM_022428, exon 1 of 6)",407,"NM_001301137",64379,"Mm.137247","NM_022428","ENSMUSG00000031738","Irx6","-","Iroquois related homeobox 6 (Drosophila)","protein-coding"]
[733,"chr12",26414405,26415400,"+",0,"NA","TTS (NR_105856)","TTS (NR_105856)",108,"NR_105856",102466676,null,"NR_105856","ENSMUSG00000098771","Mir6538","Gm27439|mmu-mir-6538","microRNA 6538","ncRNA"]
[2159,"chr3",96104438,96105104,"+",0,"NA","5' UTR (NM_001025613, exon 1 of 13)","5' UTR (NM_001025613, exon 1 of 13)",244,"NM_001025614",229603,"Mm.272336","NM_001025613","ENSMUSG00000038495","Otud7b","2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1","OTU domain containing 7B","protein-coding"]
[3059,"chr7",131542958,131543658,"+",0,"NA","exon (NM_008257, exon 1 of 2)","exon (NM_008257, exon 1 of 2)",345,"NM_008257",15373,"Mm.323562","NM_008257","ENSMUSG00000040148","Hmx3","Nkx-5.1|Nkx5-1|Nkx5.1","H6 homeobox 3","protein-coding"]
[630,"chr11",103170925,103171576,"+",0,"NA","5' UTR (NM_001077698, exon 1 of 26)","5' UTR (NM_001077698, exon 1 of 26)",112,"NM_019679",57778,"Mm.138913","NM_019679","ENSMUSG00000055805","Fmnl1","8030453N10Rik|AI553564|Fmnl|Fnrl|Frls","formin-like 1","protein-coding"]
[997,"chr14",31250941,31251931,"+",0,"NA","promoter-TSS (NM_027949)","promoter-TSS (NM_027949)",-53,"NM_027088",104416,"Mm.3779","NM_027088","ENSMUSG00000021901","Bap1","2300006C11Rik|AA989761|AW553466|mKIAA0272|uch-x4","Brca1 associated protein 1","protein-coding"]
[3394,"chr9",59750673,59751697,"+",0,"NA","promoter-TSS (NM_001172071)","promoter-TSS (NM_001172071)",11,"NM_173018",270163,"Mm.249545","NM_173018","ENSMUSG00000039585","Myo9a","4732465J09Rik|C130068I12Rik|C230003M11","myosin IXa","protein-coding"]
[1449,"chr17",35016230,35017380,"+",0,"NA","TTS (NM_011690)","TTS (NM_011690)",226,"NM_138582",27762,"Mm.56895","NM_138582","ENSMUSG00000007030","Vwa7","C6orf27|D17H6S56E-3|G7c|NG37","von Willebrand factor A domain containing 7","protein-coding"]
[608,"chr11",98981870,98983033,"+",0,"NA","exon (NM_178596, exon 1 of 1)","exon (NM_178596, exon 1 of 1)",565,"NM_178596",353155,"Mm.453253","NM_178596","ENSMUSG00000047197","Gjd3","Gja11|Gjc1|cx30.2","gap junction protein, delta 3","protein-coding"]
[3263,"chr8",113635395,113636333,"+",0,"NA","promoter-TSS (NM_173015)","promoter-TSS (NM_173015)",65,"NM_173015",270096,"Mm.74689","NM_173015","ENSMUSG00000078908","Mon1b","5031407H10|5033413H12Rik","MON1 homolog b (yeast)","protein-coding"]
[2873,"chr7",12803243,12803879,"+",0,"NA","TTS (NM_026046)","TTS (NM_026046)",15299,"NM_026046",67230,"Mm.333574","NM_026046","ENSMUSG00000057894","Zfp329","2810439M05Rik|4632409L22Rik|ZNF329","zinc finger protein 329","protein-coding"]
[1234,"chr15",102990526,102991353,"+",0,"NA","exon (NM_010466, exon 1 of 2)","exon (NM_010466, exon 1 of 2)",400,"NM_010466",15426,"Mm.6167","NM_010466",null,"Hoxc8","D130011F21Rik|Hox-3.1","homeobox C8","protein-coding"]
[1649,"chr19",5704321,5704824,"+",0,"NA","promoter-TSS (NM_010609)","promoter-TSS (NM_010609)",96,"NM_010609",16530,"Mm.440033","NM_010609","ENSMUSG00000024936","Kcnk7","2310014G03Rik|Kcnk6|Kcnk8|Knot|Mlk3","potassium channel, subfamily K, member 7","protein-coding"]
[2226,"chr4",5644082,5644753,"+",0,"NA","intron (NM_173426, intron 1 of 2)","CpG",238,"NM_173426",242297,"Mm.331470","NM_173426","ENSMUSG00000049119","Fam110b","1700012H17Rik|5031405P22|AW049855","family with sequence similarity 110, member B","protein-coding"]
[2878,"chr7",16309571,16310106,"+",0,"NA","5' UTR (NM_133234, exon 1 of 4)","5' UTR (NM_133234, exon 1 of 4)",255,"NM_133234",170770,"Mm.7660","NM_133234","ENSMUSG00000002083","Bbc3","PUMA|PUMA/JFY1","BCL2 binding component 3","protein-coding"]
[1314,"chr16",37868071,37869063,"+",0,"NA","exon (NM_177093, exon 1 of 4)","exon (NM_177093, exon 1 of 4)",167,"NM_177093",320184,"Mm.390882","NM_177093","ENSMUSG00000034158","Lrrc58","1810012N18Rik|C330018J07Rik","leucine rich repeat containing 58","protein-coding"]
[2748,"chr6",47835547,47836449,"+",0,"NA","intron (NM_173034, intron 1 of 4)","CpG",337,"NM_027477",272347,"Mm.169059","NM_027477","ENSMUSG00000062519","Zfp398","5730513I23Rik","zinc finger protein 398","protein-coding"]
[1798,"chr2",25288047,25288829,"+",0,"NA","exon (NM_030055, exon 2 of 4)","exon (NM_030055, exon 2 of 4)",293,"NM_030055",78217,"Mm.160057","NM_030055","ENSMUSG00000026963","Tmem210","4930571C24Rik","transmembrane protein 210","protein-coding"]
[1474,"chr17",46711349,46712449,"+",0,"NA","exon (NM_145488, exon 1 of 17)","exon (NM_145488, exon 1 of 17)",436,"NM_145488",224824,"Mm.299399","NM_145488","ENSMUSG00000002763","Pex6","AI132582|D130055I09Rik|mKIAA4177","peroxisomal biogenesis factor 6","protein-coding"]
[2535,"chr5",64159303,64160725,"+",0,"NA","promoter-TSS (NM_019636)","promoter-TSS (NM_019636)",-246,"NM_019636",57915,"Mm.286353","NM_019636","ENSMUSG00000029174","Tbc1d1","1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108","TBC1 domain family, member 1","protein-coding"]
[125,"chr1",136052540,136053245,"+",0,"NA","promoter-TSS (NM_001081023)","promoter-TSS (NM_001081023)",-9,"NM_001081023",12292,"Mm.4418","NM_014193","ENSMUSG00000026407","Cacna1s","AW493108|Cav1.1|Cchl1a3|fmd|mdg|sj","calcium channel, voltage-dependent, L type, alpha 1S subunit","protein-coding"]
[522,"chr11",75678970,75680218,"+",0,"NA","exon (NM_001277219, exon 1 of 3)","exon (NM_001277219, exon 1 of 3)",335,"NM_001277221",12928,"Mm.280125","NM_133656",null,"Crk","Crk-I|Crk-II|Crk-III|Crk3|CrkIII|Crko|c-Crk|p38","v-crk sarcoma virus CT10 oncogene homolog (avian)","protein-coding"]
[1632,"chr19",4625380,4626253,"+",0,"NA","promoter-TSS (NM_023131)","promoter-TSS (NM_023131)",-199,"NM_023131",19671,"Mm.391143","NM_023131","ENSMUSG00000024889","Rce1","D19Ertd283e|D19Ertd98e","RCE1 homolog, prenyl protein peptidase (S. cerevisiae)","protein-coding"]
[44,"chr1",60098083,60098822,"+",0,"NA","promoter-TSS (NM_001199061)","promoter-TSS (NM_001199061)",48,"NM_001199060",57750,"Mm.281079","NM_021312","ENSMUSG00000026019","Wdr12","4933402C23Rik|Ytm1|Ytm1p","WD repeat domain 12","protein-coding"]
[1423,"chr17",29031798,29032721,"+",0,"NA","promoter-TSS (NM_013663)","promoter-TSS (NM_013663)",-401,"NM_013663",20383,"Mm.6787","NM_013663","ENSMUSG00000071172","Srsf3","AL024116|Sfrs3|X16","serine/arginine-rich splicing factor 3","protein-coding"]
[3352,"chr9",44396811,44397612,"+",0,"NA","promoter-TSS (NM_008063)","promoter-TSS (NM_008063)",116,"NM_001293630",14385,"Mm.30087","NM_008063","ENSMUSG00000032114","Slc37a4","G6PT|G6pt1|GSD-1b|mG6PT","solute carrier family 37 (glucose-6-phosphate transporter), member 4","protein-coding"]
[2412,"chr4",140961138,140961718,"+",0,"NA","exon (NM_023374, exon 1 of 8)","exon (NM_023374, exon 1 of 8)",157,"NM_023374",67680,"Mm.246965","NM_023374","ENSMUSG00000009863","Sdhb","0710008N11Rik","succinate dehydrogenase complex, subunit B, iron sulfur (Ip)","protein-coding"]
[2152,"chr3",90612841,90613647,"+",0,"NA","intron (NM_011313, intron 1 of 2)","intron (NM_011313, intron 1 of 2)",350,"NM_011313",20200,"Mm.100144","NM_011313","ENSMUSG00000001025","S100a6","2A9|5B10|CALCYCLIN|Cacy|PRA","S100 calcium binding protein A6 (calcyclin)","protein-coding"]
[1687,"chr19",10017950,10018623,"+",0,"NA","promoter-TSS (NM_144538)","promoter-TSS (NM_144538)",58,"NM_144538",74760,"Mm.281969","NM_144538","ENSMUSG00000024663","Rab3il1","1200014K04Rik|AI115013|C76746|Rab3ail1","RAB3A interacting protein (rabin3)-like 1","protein-coding"]
[667,"chr11",115814576,115815454,"+",0,"NA","exon (NM_029557, exon 2 of 11)","exon (NM_029557, exon 2 of 11)",276,"NM_029557",76265,"Mm.275438","NM_029557","ENSMUSG00000020781","Tsen54","0610034P02Rik","tRNA splicing endonuclease 54 homolog (S. cerevisiae)","protein-coding"]
[1188,"chr15",85581014,85581976,"+",0,"NA","promoter-TSS (NM_001163633)","promoter-TSS (NM_001163633)",326,"NM_009528",22422,"Mm.306946","NM_009528","ENSMUSG00000022382","Wnt7b","Wnt-7b","wingless-type MMTV integration site family, member 7B","protein-coding"]
[3142,"chr8",41239723,41240501,"+",0,"NA","intron (NM_023662, intron 1 of 37)","CpG",353,"NM_023662",18536,"Mm.117896","NM_023662","ENSMUSG00000031592","Pcm1","2600002H09Rik|9430077F19Rik|C030044G17Rik","pericentriolar material 1","protein-coding"]
[2008,"chr2",155956449,155957069,"+",0,"NA","intron (NM_001129999, intron 1 of 32)","CpG",201,"NM_177217",16328,"Mm.288729","NM_008383","ENSMUSG00000038241","Cep250","AW490617|B230210E21Rik|Cep2|Inmp","centrosomal protein 250","protein-coding"]
[2862,"chr6",147475706,147476708,"+",0,"NA","intron (NM_025911, intron 1 of 12)","CpG",336,"NM_025911",67015,"Mm.209774","NM_025911","ENSMUSG00000030301","Ccdc91","1700086G08Rik|1810060J02Rik|AU045683|AW555238|p56","coiled-coil domain containing 91","protein-coding"]
[714,"chr11",121830086,121830842,"+",0,"NA","exon (NM_029049, exon 1 of 4)","exon (NM_029049, exon 1 of 4)",246,"NM_029049",74675,"Mm.61213","NM_029049","ENSMUSG00000039198","Ptchd3","4930451E13Rik|4933440L20Rik|RNDEu-3","patched domain containing 3","protein-coding"]
[1280,"chr16",18836486,18836993,"+",0,"NA","exon (NM_001033164, exon 2 of 3)","exon (NM_001033164, exon 2 of 3)",159,"NM_001033164",72307,"Mm.36907","NM_001033164","ENSMUSG00000071632","2510002D24Rik","2410043I01Rik|AA163535|AA409624|DXMgi27","RIKEN cDNA 2510002D24 gene","protein-coding"]
[1564,"chr18",36734856,36735597,"+",0,"NA","exon (NM_028036, exon 1 of 12)","exon (NM_028036, exon 1 of 12)",156,"NM_028036",71983,"Mm.135188","NM_028036","ENSMUSG00000006850","Tmco6","2410015B03Rik","transmembrane and coiled-coil domains 6","protein-coding"]
[313,"chr10",84622183,84622740,"+",0,"NA","promoter-TSS (NM_027423)","promoter-TSS (NM_027423)",24,"NM_027423",70428,"Mm.335007","NM_027423","ENSMUSG00000034453","Polr3b","2700078H01Rik|A330032P03Rik|C85372|RPC2","polymerase (RNA) III (DNA directed) polypeptide B","protein-coding"]
[2017,"chr2",156839702,156840779,"+",0,"NA","intron (NM_001291124, intron 1 of 3)","CpG",233,"NM_173396",228839,"Mm.315625","NM_173396","ENSMUSG00000062175","Tgif2","4921501K24|5730599O09Rik|C80753|C81206","TGFB-induced factor homeobox 2","protein-coding"]
[2663,"chr5",135106758,135107341,"+",0,"NA","exon (NM_021455, exon 1 of 17)","exon (NM_021455, exon 1 of 17)",158,"NM_021455",58805,"Mm.34213","NM_021455","ENSMUSG00000005373","Mlxipl","ChREBP|WS-bHLH|Wbscr14|bHLHd14","MLX interacting protein-like","protein-coding"]
[3023,"chr7",117380631,117381855,"+",0,"NA","exon (NM_175645, exon 1 of 12)","exon (NM_175645, exon 1 of 12)",264,"NM_175645",233781,"Mm.461427","NM_175645","ENSMUSG00000030657","Xylt1","8030490L12","xylosyltransferase 1","protein-coding"]
[2884,"chr7",24332978,24334032,"+",0,"NA","exon (NM_001163810, exon 1 of 1)","exon (NM_001163810, exon 1 of 1)",460,"NM_001163810",69301,"Mm.144202","NM_027028","ENSMUSG00000055826","Tescl","1700008P20Rik","tescalcin-like","protein-coding"]
[2661,"chr5",134986041,134987554,"+",0,"NA","TTS (NR_026907)","TTS (NR_026907)",583,"NM_009902",12739,"Mm.158662","NM_009902","ENSMUSG00000070473","Cldn3","AI182374|Cpetr2|mRVP1","claudin 3","protein-coding"]
[1324,"chr16",55973689,55974681,"+",0,"NA","non-coding (NR_027965, exon 1 of 1)","non-coding (NR_027965, exon 1 of 1)",381,"NM_173026",271377,"Mm.282814","NM_173026","ENSMUSG00000022601","Zbtb11","9230110G02Rik|ZNF-U69274","zinc finger and BTB domain containing 11","protein-coding"]
[397,"chr11",21571571,21572401,"+",0,"NA","promoter-TSS (NM_008618)","promoter-TSS (NM_008618)",-52,"NM_001316675",17449,"Mm.212703","NM_008618","ENSMUSG00000020321","Mdh1","B230377B03Rik|D17921|MDH-s|MDHA|Mor-2|Mor2","malate dehydrogenase 1, NAD (soluble)","protein-coding"]
[1096,"chr15",34082187,34083582,"+",0,"NA","5' UTR (NM_026002, exon 1 of 12)","5' UTR (NM_026002, exon 1 of 12)",165,"NM_026002",67154,"Mm.130883","NM_026002","ENSMUSG00000022255","Mtdh","2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric","metadherin","protein-coding"]
[3077,"chr7",140948608,140949660,"+",0,"NA","3' UTR (NM_053088, exon 2 of 2)","3' UTR (NM_053088, exon 2 of 2)",1105,"NM_053088",73835,"Mm.389989","NM_053088","ENSMUSG00000025489","Ifitm5","1110003J06Rik|AW213665|Bril|DSPA1|Hrmp1|Hrtm1","interferon induced transmembrane protein 5","protein-coding"]
[3305,"chr8",124721343,124722500,"+",0,"NA","promoter-TSS (NM_145607)","promoter-TSS (NM_145607)",54,"NM_145607",234875,"Mm.38436","NM_145607","ENSMUSG00000037300","Ttc13","BC017545","tetratricopeptide repeat domain 13","protein-coding"]
[3285,"chr8",122280945,122283885,"+",0,"NA","5' UTR (NM_009569, exon 1 of 10)","5' UTR (NM_009569, exon 1 of 10)",274,"NM_009569",22761,"Mm.3105","NM_009569","ENSMUSG00000049577","Zfpm1","FOG|Fog1","zinc finger protein, multitype 1","protein-coding"]
[3433,"chr9",92541841,92543010,"+",0,"NA","non-coding (NR_029474, exon 1 of 1)","non-coding (NR_029474, exon 1 of 1)",202,"NM_001142916",26432,"Mm.79983","NM_011961","ENSMUSG00000032374","Plod2","D530025C14Rik|LH2|Plod-2","procollagen lysine, 2-oxoglutarate 5-dioxygenase 2","protein-coding"]
[2934,"chr7",45832237,45833769,"+",0,"NA","exon (NM_008172, exon 12 of 12)","exon (NM_008172, exon 12 of 12)",-2214,"NM_153419",101612,"Mm.274847","NM_153419","ENSMUSG00000053801","Grwd1","A301|AI504353|Grwd|Wdr28","glutamate-rich WD repeat containing 1","protein-coding"]
[1657,"chr19",6241530,6242244,"+",0,"NA","exon (NM_194348, exon 1 of 40)","exon (NM_194348, exon 1 of 40)",219,"NM_194348",329015,"Mm.277384","NM_194348","ENSMUSG00000024773","Atg2a","1810013C15Rik|A830054M12|BC023754|mKIAA0404","autophagy related 2A","protein-coding"]
[3009,"chr7",109518848,109519598,"+",0,"NA","promoter-TSS (NR_028079)","promoter-TSS (NR_028079)",28,"NM_011975",26451,"Mm.305750","NM_011975","ENSMUSG00000046364","Rpl27a","L27'|L27A|L29","ribosomal protein L27A","protein-coding"]
[2185,"chr3",116594460,116595589,"+",0,"NA","promoter-TSS (NM_001289568)","promoter-TSS (NM_001289568)",66,"NM_001289571",72776,"Mm.440836","NM_028349","ENSMUSG00000027959","Sass6","2810453L12Rik","spindle assembly 6 homolog (C. elegans)","protein-coding"]
[2717,"chr5",147430470,147431250,"+",0,"NA","exon (NM_028291, exon 1 of 19)","exon (NM_028291, exon 1 of 19)",280,"NM_028291",72587,"Mm.320469","NM_028291","ENSMUSG00000029647","Pan3","2700050F09Rik|A430027N15Rik|AU014670","PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)","protein-coding"]
[1191,"chr15",85859364,85860074,"+",0,"NA","promoter-TSS (NM_001168672)","promoter-TSS (NM_001168672)",12,"NM_001168672",29870,"Mm.20858","NM_013882","ENSMUSG00000022385","Gtse1","B99|Gtse-1","G two S phase expressed protein 1","protein-coding"]
[3477,"chr9",108936497,108937312,"+",0,"NA","intron (NM_025407, intron 1 of 12)","CpG",256,"NM_025407",22273,"Mm.335460","NM_025407","ENSMUSG00000025651","Uqcrc1","1110032G10Rik","ubiquinol-cytochrome c reductase core protein 1","protein-coding"]
[459,"chr11",60104528,60106555,"+",0,"NA","intron (NM_009021, intron 1 of 5)","CpG",528,"NM_009021",19377,"Mm.296366","NM_009021","ENSMUSG00000062115","Rai1","Gt1","retinoic acid induced 1","protein-coding"]
[823,"chr12",110737587,110738218,"+",0,"NA","promoter-TSS (NM_027149)","promoter-TSS (NM_027149)",-47,"NM_027149",69641,"Mm.491226","NM_027149","ENSMUSG00000037957","Wdr20","2310040A13Rik|AI549910|Wdr20a","WD repeat domain 20","protein-coding"]
[1495,"chr17",56989975,56990633,"+",0,"NA","promoter-TSS (NM_017393)","promoter-TSS (NM_017393)",40,"NM_017393",53895,"Mm.287892","NM_017393","ENSMUSG00000002660","Clpp","AU019820|D17Wsu160e","caseinolytic mitochondrial matrix peptidase proteolytic subunit","protein-coding"]
[771,"chr12",79130359,79131285,"+",0,"NA","promoter-TSS (NM_009705)","promoter-TSS (NM_009705)",34,"NM_009705",11847,"Mm.3506","NM_009705","ENSMUSG00000021125","Arg2","AII|AU022422","arginase type II","protein-coding"]
[1753,"chr19",47854606,47855500,"+",0,"NA","promoter-TSS (NM_010362)","promoter-TSS (NM_010362)",64,"NM_010362",14873,"Mm.378931","NM_010362","ENSMUSG00000025068","Gsto1","AA407097|AI194287|AU018802|GSTO 1-1|GSTX|SPG-R|p28","glutathione S-transferase omega 1","protein-coding"]
[401,"chr11",29373350,29374254,"+",0,"NA","promoter-TSS (NM_176841)","promoter-TSS (NM_176841)",-370,"NM_176841",108686,"Mm.338284","NM_176841","ENSMUSG00000032740","Ccdc88a","A430106J12Rik|AI848406|Ape|C130096N06Rik|C330012F17Rik|D130005J21Rik|Girdin|Giv|Grdn|Hkrp1","coiled coil domain containing 88A","protein-coding"]
[3187,"chr8",83608195,83608914,"+",0,"NA","promoter-TSS (NM_001308227)","promoter-TSS (NM_001308227)",6,"NM_001308227",81489,"Mm.282092","NM_018808","ENSMUSG00000005483","Dnajb1","0610007I11Rik|DjB1|HSPF1|Hdj1|Hsp40","DnaJ (Hsp40) homolog, subfamily B, member 1","protein-coding"]
[2688,"chr5",139251853,139252845,"+",0,"NA","promoter-TSS (NM_026269)","promoter-TSS (NM_026269)",25,"NM_026269",67604,"Mm.270137","NM_026269","ENSMUSG00000025858","Get4","1110007L15Rik|AW412535|Cee","golgi to ER traffic protein 4 homolog (S. cerevisiae)","protein-coding"]
[186,"chr10",7662628,7663763,"+",0,"NA","promoter-TSS (NR_030698)","promoter-TSS (NR_030698)",-176,"NR_030698",320642,"Mm.398806","NR_030698",null,"A630066F11Rik","-","RIKEN cDNA A630066F11 gene","ncRNA"]
[1797,"chr2",25271893,25273626,"+",0,"NA","promoter-TSS (NM_023464)","promoter-TSS (NM_023464)",293,"NM_175300",99152,"Mm.291624","NM_175300","ENSMUSG00000026965","Anapc2","9230107K09Rik|AL024279|Apc2|Emi4|Imi4|mKIAA1406","anaphase promoting complex subunit 2","protein-coding"]
[1119,"chr15",66577379,66578164,"+",0,"NA","5' UTR (NM_001081409, exon 1 of 21)","5' UTR (NM_001081409, exon 1 of 21)",199,"NM_001081409",239510,"Mm.267473","NM_178718","ENSMUSG00000072501","Phf20l1","CGI-72|E130113K22Rik","PHD finger protein 20-like 1","protein-coding"]
[1914,"chr2",84871473,84872092,"+",0,"NA","TTS (NM_199223)","TTS (NM_199223)",14910,"NM_199223",269295,"Mm.86447","NM_199223","ENSMUSG00000050896","Rtn4rl2","Ngr2|Ngrh1|Ngrl3","reticulon 4 receptor-like 2","protein-coding"]
[3039,"chr7",126852233,126853063,"+",0,"NA","TTS (NM_010069)","TTS (NM_010069)",5095,"NM_010069",13446,"Mm.266301","NM_010069","ENSMUSG00000052301","Doc2a","-","double C2, alpha","protein-coding"]
[2756,"chr6",51432565,51433609,"+",0,"NA","exon (NM_010903, exon 1 of 4)","exon (NM_010903, exon 1 of 4)",417,"NM_010903",18025,"Mm.42138","NM_010903","ENSMUSG00000029832","Nfe2l3","Nrf3","nuclear factor, erythroid derived 2, like 3","protein-coding"]
[1705,"chr19",23140682,23142374,"+",0,"NA","5' UTR (NM_010638, exon 1 of 2)","5' UTR (NM_010638, exon 1 of 2)",302,"NM_010638",16601,"Mm.291595","NM_010638","ENSMUSG00000033863","Klf9","2310051E17Rik|AA589643|BTEB-1|Bteb1|ENSMUSG00000055440|Gm9971","Kruppel-like factor 9","protein-coding"]
[1919,"chr2",91053846,91054538,"+",0,"NA","5' UTR (NM_008948, exon 1 of 12)","5' UTR (NM_008948, exon 1 of 12)",176,"NM_008948",19182,"Mm.289832","NM_008948","ENSMUSG00000002102","Psmc3","TBP-1","proteasome (prosome, macropain) 26S subunit, ATPase 3","protein-coding"]
[1938,"chr2",118676682,118677893,"+",0,"NA","promoter-TSS (NM_001145854)","promoter-TSS (NM_001145854)",41,"NM_001145854",214230,"Mm.241857","NM_001033254","ENSMUSG00000074923","Pak6","4732456M09","p21 protein (Cdc42/Rac)-activated kinase 6","protein-coding"]
[3000,"chr7",101321244,101322120,"+",0,"NA","intron (NM_019990, intron 1 of 6)","CpG",363,"NM_019990",56018,"Mm.28896","NM_019990","ENSMUSG00000030688","Stard10","AV048538|CGI-52|NY-C0-28|PC-TP2|PCTP2|Pctpl|Sdccag28|SdccagG28|TISP-81","START domain containing 10","protein-coding"]
[915,"chr13",62964557,62965305,"+",0,"NA","promoter-TSS (NM_001289926)","promoter-TSS (NM_001289926)",38,"NM_001289924",72061,"Mm.188105","NM_028079","ENSMUSG00000021458","2010111I01Rik","2300006M17Rik|AP-O|Aopep|mir-23b|mir-24-1|mir-27b","RIKEN cDNA 2010111I01 gene","protein-coding"]
[3107,"chr8",10153763,10154430,"+",0,"NA","5' UTR (NM_001081397, exon 1 of 36)","5' UTR (NM_001081397, exon 1 of 36)",173,"NM_001081397",244281,"Mm.422761","NM_001081397","ENSMUSG00000039057","Myo16","BM140241|C230040D10Rik|Gm1105|NYAP3|mKIAA0865","myosin XVI","protein-coding"]
[2978,"chr7",83631659,83632383,"+",0,"NA","promoter-TSS (NM_023377)","promoter-TSS (NM_023377)",4,"NM_023377",170460,"Mm.357953","NM_023377","ENSMUSG00000046027","Stard5","2310058G22Rik|AI607880|D7Ertd152e","StAR-related lipid transfer (START) domain containing 5","protein-coding"]
[1586,"chr18",60963345,60964275,"+",0,"NA","5' UTR (NM_009792, exon 1 of 7)","5' UTR (NM_009792, exon 1 of 7)",256,"NM_001286809",12322,"Mm.131530","NM_009792","ENSMUSG00000024617","Camk2a","CaMKII|R74975|mKIAA0968","calcium/calmodulin-dependent protein kinase II alpha","protein-coding"]
[1986,"chr2",140170145,140170976,"+",0,"NA","promoter-TSS (NM_001081090)","promoter-TSS (NM_001081090)",-2,"NM_001081090",66580,"Mm.21228","NM_001081090","ENSMUSG00000045624","Esf1","2610101J03Rik|ABTAP|AW545818|C79684","ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)","protein-coding"]
[3441,"chr9",101074535,101075497,"+",0,"NA","5' UTR (NM_001100451, exon 1 of 2)","5' UTR (NM_001100451, exon 1 of 2)",254,"NM_001100451",77853,"Mm.326206","NM_001100451",null,"Msl2","E130103E02Rik|Msl2l1|Rnf184","male-specific lethal 2 homolog (Drosophila)","protein-coding"]
[1456,"chr17",35379425,35380022,"+",0,"NA","intron (NM_001143689, intron 1 of 5)","CpG",106,"NM_001143689",15015,"Mm.464284","NM_001143689","ENSMUSG00000035929","H2-Q4","H-2Q4|H2-Gs10|Qa-4|Qa4|Qat-4|Qb-1|Qb1","histocompatibility 2, Q region locus 4","protein-coding"]
[2606,"chr5",115340756,115341716,"+",0,"NA","promoter-TSS (NM_029645)","promoter-TSS (NM_029645)",-11,"NM_026933",69076,"Mm.27951","NM_026933","ENSMUSG00000029535","Triap1","1810015M01Rik|AU020874|AU043831|P53csv|Wf-1","TP53 regulated inhibitor of apoptosis 1","protein-coding"]
[404,"chr11",32205024,32205771,"+",0,"NA","promoter-TSS (NM_030093)","promoter-TSS (NM_030093)",-18,"NM_030093",78372,"Mm.29952","NM_030093","ENSMUSG00000040767","Snrnp25","3300001G02Rik|AL033324|C16ORF33","small nuclear ribonucleoprotein 25 (U11/U12)","protein-coding"]
[516,"chr11",75510072,75510996,"+",0,"NA","exon (NM_001029938, exon 2 of 8)","exon (NM_001029938, exon 2 of 8)",440,"NM_001029938",280408,"Mm.41416","NM_001029938","ENSMUSG00000038195","Rilp","AI835553|Gm857","Rab interacting lysosomal protein","protein-coding"]
[1813,"chr2",26586622,26587392,"+",0,"NA","intron (NM_001164564, intron 1 of 8)","CpG",377,"NM_001164564",353156,"Mm.268933","NM_178444","ENSMUSG00000026921","Egfl7","VE-statin|Zneu1","EGF-like domain 7","protein-coding"]
[2004,"chr2",155236400,155237047,"+",0,"NA","non-coding (NR_111890, exon 1 of 4)","non-coding (NR_111890, exon 1 of 4)",115,"NM_001291108",67068,"Mm.23693","NM_025947","ENSMUSG00000047459","Dynlrb1","2010012N15Rik|2010320M17Rik|9430076K19Rik|AV124457|DNLC2A|Dncl2a|km23-1","dynein light chain roadblock-type 1","protein-coding"]
[2060,"chr2",170496099,170496832,"+",0,"NA","promoter-TSS (NM_001013369)","promoter-TSS (NM_001013369)",37,"NM_001013369",109054,"Mm.28808","NM_001013369","ENSMUSG00000052033","Pfdn4","0610025M10Rik|1810063B06Rik|C-1|C1|Pfd4","prefoldin 4","protein-coding"]
[1551,"chr18",32376681,32377718,"+",0,"NA","promoter-TSS (NM_009668)","promoter-TSS (NM_009668)",-18,"NM_001083334",30948,"Mm.4383","NM_009668","ENSMUSG00000024381","Bin1","ALP-1|Amphl|BRAMP-2|SH3P9","bridging integrator 1","protein-coding"]
[702,"chr11",120624370,120625130,"+",0,"NA","TTS (NR_105901)","TTS (NR_105901)",126,"NR_105901",102465565,null,"NR_105901","ENSMUSG00000098282","Mir6936","Gm27574|mmu-mir-6936","microRNA 6936","ncRNA"]
[2297,"chr4",89294144,89295259,"+",0,"NA","promoter-TSS (NM_009877)","promoter-TSS (NM_009877)",-82,"NM_009877",12578,"Mm.4733","NM_009877","ENSMUSG00000044303","Cdkn2a","ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19<ARF>|p19ARF","cyclin-dependent kinase inhibitor 2A","protein-coding"]
[2163,"chr3",97658149,97658901,"+",0,"NA","intron (NM_182997, intron 1 of 7)","CpG",313,"NM_182997",108097,"Mm.31175","NM_182997","ENSMUSG00000038205","Prkab2","5730553K21Rik|AW049591|BB124140","protein kinase, AMP-activated, beta 2 non-catalytic subunit","protein-coding"]
[2214,"chr3",146149770,146150281,"+",0,"NA","promoter-TSS (NM_001005846)","promoter-TSS (NM_001005846)",-149,"NM_001005846",68279,"Mm.116862","NM_026656","ENSMUSG00000011008","Mcoln2","3300002C04Rik|AI549968|C86638|TRPML2","mucolipin 2","protein-coding"]
[2904,"chr7",28693096,28693793,"+",0,"NA","exon (NM_001163702, exon 1 of 5)","exon (NM_001163702, exon 1 of 5)",300,"NM_001163702",233040,"Mm.116116","NM_207238","ENSMUSG00000037463","Fbxo27","E130008B10Rik|FBG5|Gm161","F-box protein 27","protein-coding"]
[2346,"chr4",126103932,126104842,"+",0,"NA","intron (NM_028800, intron 1 of 10)","CpG",430,"NM_001145827",74178,"Mm.440269","NM_028800","ENSMUSG00000042608","Stk40","2310004N11Rik|AI428792","serine/threonine kinase 40","protein-coding"]
[2195,"chr3",129213682,129214331,"+",0,"NA","promoter-TSS (NM_001287048)","promoter-TSS (NM_001287048)",74,"NM_001287048",18741,"Mm.246804","NM_011098","ENSMUSG00000028023","Pitx2","9430085M16Rik|Brx1|Brx1b|Munc30|Otlx2|Ptx2|Rieg","paired-like homeodomain transcription factor 2","protein-coding"]
[561,"chr11",84869521,84870133,"+",0,"NA","promoter-TSS (NR_131201)","promoter-TSS (NR_131201)",-178,"NR_131201",102635561,"Mm.341797","NR_131197",null,"Ggnbp2os","-","gametogenetin binding protein 2, opposite strand","ncRNA"]
[2112,"chr3",55054943,55055931,"+",0,"NA","promoter-TSS (NM_007628)","promoter-TSS (NM_007628)",195,"NR_040593",70970,"Mm.251485","NR_040593","ENSMUSG00000106589","4931419H13Rik","-","RIKEN cDNA 4931419H13 gene","ncRNA"]
[2555,"chr5",88765005,88765499,"+",0,"NA","5' UTR (NM_007832, exon 1 of 7)","5' UTR (NM_007832, exon 1 of 7)",239,"NM_007832",13178,"Mm.298892","NM_007832","ENSMUSG00000029366","Dck","-","deoxycytidine kinase","protein-coding"]
[2221,"chr3",154596525,154597283,"+",0,"NA","exon (NM_172474, exon 1 of 6)","exon (NM_172474, exon 1 of 6)",193,"NM_009968",12972,"Mm.374855","NM_009968","ENSMUSG00000028199","Cryz","Sez9","crystallin, zeta","protein-coding"]
[2982,"chr7",90302201,90302895,"+",0,"NA","non-coding (NR_110348, exon 1 of 9)","non-coding (NR_110348, exon 1 of 9)",193,"NR_110348",83671,"Mm.26751","NM_031394","ENSMUSG00000030616","Sytl2","AI266830|Slp2|mKIAA1597","synaptotagmin-like 2","protein-coding"]
[357,"chr10",127041110,127042318,"+",0,"NA","promoter-TSS (NM_001205036)","promoter-TSS (NM_001205036)",-218,"NM_010792",17299,"Mm.251593","NM_010792","ENSMUSG00000006732","Mettl1","2810012D02Rik","methyltransferase like 1","protein-coding"]
[1307,"chr16",33380364,33381048,"+",0,"NA","promoter-TSS (NR_045709)","promoter-TSS (NR_045709)",30,"NR_045709",100502742,"Mm.217880","NR_045709","ENSMUSG00000097318","1700007L15Rik","linc-Iqcg|linc1609","RIKEN cDNA 1700007L15 gene","ncRNA"]
[3236,"chr8",105700381,105701299,"+",0,"NA","promoter-TSS (NM_001047435)","promoter-TSS (NM_001047435)",255,"NM_001012638",497652,"Mm.12964","NM_001012638","ENSMUSG00000038000","Acd","-","adrenocortical dysplasia","protein-coding"]
[1812,"chr2",26583558,26584437,"+",0,"NA","5' UTR (NM_198725, exon 1 of 10)","5' UTR (NM_198725, exon 1 of 10)",133,"NM_198725",353156,"Mm.268933","NM_178444","ENSMUSG00000026921","Egfl7","VE-statin|Zneu1","EGF-like domain 7","protein-coding"]
[1941,"chr2",118926318,118926845,"+",0,"NA","promoter-TSS (NM_028117)","promoter-TSS (NM_028117)",84,"NM_028117",72136,"Mm.486238","NM_028117","ENSMUSG00000074916","Chst14","2600016L03Rik|D4ST-1|D4st1","carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14","protein-coding"]
[2826,"chr6",114130843,114131640,"+",0,"NA","promoter-TSS (NM_172890)","promoter-TSS (NM_172890)",0,"NM_172890",243616,"Mm.44683","NM_172890","ENSMUSG00000030307","Slc6a11","D930045G19Rik|E130202I16Rik|GAT4|Gabt4|Gat3","solute carrier family 6 (neurotransmitter transporter, GABA), member 11","protein-coding"]
[1769,"chr19",60889582,60890296,"+",0,"NA","5' UTR (NM_018869, exon 1 of 16)","5' UTR (NM_018869, exon 1 of 16)",190,"NM_018869",14773,"Mm.279400","NM_018869","ENSMUSG00000003228","Grk5","Gprk5","G protein-coupled receptor kinase 5","protein-coding"]
[2475,"chr5",22550059,22550538,"+",0,"NA","promoter-TSS (NM_011959)","promoter-TSS (NM_011959)",33,"NM_011959",26429,"Mm.412217","NM_011959","ENSMUSG00000029012","Orc5","AL033327|MmORC5|Orc5l","origin recognition complex, subunit 5","protein-coding"]
[455,"chr11",59809383,59810174,"+",0,"NA","promoter-TSS (NR_045686)","promoter-TSS (NR_045686)",-177,"NM_001271357",216805,"Mm.339640","NM_146018","ENSMUSG00000032633","Flcn","AU014660|B430214A04Rik|Bhd|FLCL","folliculin","protein-coding"]
[1875,"chr2",38931727,38932326,"+",0,"NA","promoter-TSS (NM_172854)","promoter-TSS (NM_172854)",46,"NM_172854",241327,"Mm.103491","NM_172854",null,"Olfml2a","4932431K08Rik|mFLJ00237","olfactomedin-like 2A","protein-coding"]
[1673,"chr19",7382089,7383388,"+",0,"NA","promoter-TSS (NR_045703)","promoter-TSS (NR_045703)",-265,"NR_045703",654802,"Mm.414924","NR_045703",null,"1700105P06Rik","-","RIKEN cDNA 1700105P06 gene","ncRNA"]
[2132,"chr3",86223577,86224927,"+",0,"NA","promoter-TSS (NM_030695)","promoter-TSS (NM_030695)",-438,"NM_001077688",80877,"Mm.439825","NM_030695","ENSMUSG00000028080","Lrba","C80285|D3Ertd775e|Lab300|Lba","LPS-responsive beige-like anchor","protein-coding"]
[297,"chr10",80804873,80805604,"+",0,"NA","promoter-TSS (NM_007445)","promoter-TSS (NM_007445)",-10,"NM_007445",11705,"Mm.376094","NM_007445","ENSMUSG00000035262","Amh","MIS","anti-Mullerian hormone","protein-coding"]
[963,"chr14",8080161,8080720,"+",0,"NA","5' UTR (NM_025938, exon 1 of 6)","5' UTR (NM_025938, exon 1 of 6)",127,"NM_025938",67053,"Mm.210048","NM_025938","ENSMUSG00000023156","Rpp14","2610511E03Rik|AA682089","ribonuclease P 14 subunit","protein-coding"]
[3181,"chr8",77549275,77549725,"+",0,"NA","5' UTR (NM_001081240, exon 1 of 12)","5' UTR (NM_001081240, exon 1 of 12)",103,"NM_001081240",102182,"Mm.197630","NM_178903","ENSMUSG00000037134","Prmt10","AI931714|Prmt9","protein arginine methyltransferase 10 (putative)","protein-coding"]
[2612,"chr5",117357303,117357805,"+",0,"NA","intron (NM_021539, intron 1 of 8)","CpG",249,"NM_021539",59043,"Mm.28489","NM_021539","ENSMUSG00000029364","Wsb2","AA673511|Swip2|WSB-2","WD repeat and SOCS box-containing 2","protein-coding"]
[2031,"chr2",162931208,162932157,"+",0,"NA","exon (NM_026499, exon 1 of 6)","exon (NM_026499, exon 1 of 6)",174,"NM_026499",67996,"Mm.24042","NM_026499","ENSMUSG00000016921","Srsf6","1210001E11Rik|AI314910|AW146126|Sfrs6","serine/arginine-rich splicing factor 6","protein-coding"]
[2272,"chr4",48539819,48540959,"+",0,"NA","promoter-TSS (NM_028137)","promoter-TSS (NM_028137)",-110,"NM_028137",66665,"Mm.140749","NM_028137","ENSMUSG00000039693","Msantd3","2410046L14Rik|2810429P03Rik|5730528L13Rik|Mysantd3","Myb/SANT-like DNA-binding domain containing 3","protein-coding"]
[1889,"chr2",69722665,69723664,"+",0,"NA","promoter-TSS (NM_001081086)","promoter-TSS (NM_001081086)",76,"NM_001081086",228005,"Mm.11815","NM_001081086","ENSMUSG00000042133","Ppig","AU019516|AU022200|B230312B02Rik|CYP|SRCyp","peptidyl-prolyl isomerase G (cyclophilin G)","protein-coding"]
[2692,"chr5",139767455,139768171,"+",0,"NA","TTS (NR_106004)","TTS (NR_106004)",130,"NR_106004",102465628,null,"NR_106004","ENSMUSG00000098574","Mir7037","Gm27447|mmu-mir-7037","microRNA 7037","ncRNA"]
[2646,"chr5",125441130,125442194,"+",0,"NA","promoter-TSS (NM_029752)","promoter-TSS (NM_029752)",94,"NM_029752",76809,"Mm.290720","NM_029752","ENSMUSG00000037905","Bri3bp","2410150I18Rik|AI841257|AW742481","Bri3 binding protein","protein-coding"]
[10,"chr1",16105294,16106509,"+",0,"NA","promoter-TSS (NM_133832)","promoter-TSS (NM_133832)",19,"NM_133832",98711,"Mm.274376","NM_133832","ENSMUSG00000025921","Rdh10","3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp","retinol dehydrogenase 10 (all-trans)","protein-coding"]
[980,"chr14",24004270,24005273,"+",0,"NA","promoter-TSS (NM_001253372)","promoter-TSS (NM_001253372)",-220,"NR_131107",78019,"Mm.243845","NR_131107",null,"4930519K11Rik","-","RIKEN cDNA 4930519K11 gene","ncRNA"]
[1596,"chr18",67133192,67134248,"+",0,"NA","5' UTR (NM_010307, exon 1 of 12)","5' UTR (NM_010307, exon 1 of 12)",160,"NM_010307",14680,"Mm.440746","NM_010307","ENSMUSG00000024524","Gnal","2610011C15Rik|9630020G10Rik|Galphaolf|Gna10|Golf","guanine nucleotide binding protein, alpha stimulating, olfactory type","protein-coding"]
[550,"chr11",80208861,80209699,"+",0,"NA","exon (NM_001163355, exon 1 of 20)","exon (NM_001163355, exon 1 of 20)",225,"NM_021536",59040,"Mm.489674","NM_021536","ENSMUSG00000017686","Rhot1","2210403N23Rik|AA415293|AF244542|AI834919|Arht1|C430039G08Rik|Miro1","ras homolog gene family, member T1","protein-coding"]
[2083,"chr2",181520172,181521050,"+",0,"NA","non-coding (NR_073369, exon 1 of 6)","non-coding (NR_073369, exon 1 of 6)",126,"NM_001271584",13002,"Mm.140761","NM_016775","ENSMUSG00000000826","Dnajc5","2610314I24Rik|AU018536|Csp","DnaJ (Hsp40) homolog, subfamily C, member 5","protein-coding"]
[2697,"chr5",140663271,140664253,"+",0,"NA","3' UTR (NM_028833, exon 23 of 23)","3' UTR (NM_028833, exon 23 of 23)",-14731,"NM_175274",78339,"Mm.28947","NM_175274","ENSMUSG00000036565","Ttyh3","2900029G13Rik|AI414930|TTY3|mTTY3","tweety homolog 3 (Drosophila)","protein-coding"]
[2097,"chr3",36150862,36151718,"+",0,"NA","intron (NM_001101478, intron 1 of 3)","CpG",210,"NM_001101478",241944,"Mm.260056","NM_001101478","ENSMUSG00000033883","D3Ertd254e","-","DNA segment, Chr 3, ERATO Doi 254, expressed","protein-coding"]
[1081,"chr15",5116070,5117090,"+",0,"NA","promoter-TSS (NM_026069)","promoter-TSS (NM_026069)",-33,"NM_026069",67281,"Mm.10474","NM_026069","ENSMUSG00000041841","Rpl37","3110005M08Rik","ribosomal protein L37","protein-coding"]
[1651,"chr19",5878043,5878925,"+",0,"NA","promoter-TSS (NM_134154)","promoter-TSS (NM_134154)",18,"NM_134154",107375,"Mm.5323","NM_134154","ENSMUSG00000024818","Slc25a45","AW491445","solute carrier family 25, member 45","protein-coding"]
[958,"chr13",112987311,112988410,"+",0,"NA","promoter-TSS (NM_001081062)","promoter-TSS (NM_001081062)",58,"NM_001081062",218630,"Mm.25457","NM_001081062","ENSMUSG00000042417","Ccno","C86987|Ccnu|E130318K11|Ung2","cyclin O","protein-coding"]
[1569,"chr18",37973928,37974705,"+",0,"NA","TTS (NR_105947)","TTS (NR_105947)",301,"NR_105947",102466779,null,"NR_105947","ENSMUSG00000098608","Mir6981","Gm27609|mmu-mir-6981","microRNA 6981","ncRNA"]
[1736,"chr19",43752749,43753579,"+",0,"NA","promoter-TSS (NM_144874)","promoter-TSS (NM_144874)",141,"NM_025530",66388,"Mm.20257","NM_025530","ENSMUSG00000025193","Cutc","2310039I18Rik|AI326282|CGI-32","cutC copper transporter homolog (E.coli)","protein-coding"]
[3299,"chr8",123253702,123254988,"+",0,"NA","promoter-TSS (NM_028200)","promoter-TSS (NM_028200)",-123,"NM_028200",72325,"Mm.276193","NM_028200","ENSMUSG00000001062","Vps9d1","1300018I17Rik|2410004N05Rik|5DOS1|Vsp9d1","VPS9 domain containing 1","protein-coding"]
[592,"chr11",96849859,96850682,"+",0,"NA","promoter-TSS (NR_029562)","promoter-TSS (NR_029562)",-123,"NR_029562",387170,null,"NR_029562","ENSMUSG00000065515","Mir152","Mirn152|mir-152|mmu-mir-152","microRNA 152","ncRNA"]
[2542,"chr5",67607861,67608915,"+",0,"NA","5' UTR (NM_001033415, exon 1 of 2)","5' UTR (NM_001033415, exon 1 of 2)",505,"NM_001033415",330096,"Mm.442747","NM_001033415","ENSMUSG00000050010","Shisa3","D830007B15Rik","shisa family member 3","protein-coding"]
[2123,"chr3",65528418,65529551,"+",0,"NA","non-coding (NR_027955, exon 2 of 2)","non-coding (NR_027955, exon 2 of 2)",430,"NR_027955",71004,"Mm.475465","NM_001033527","ENSMUSG00000074580","4931440P22Rik","-","RIKEN cDNA 4931440P22 gene","ncRNA"]
[1978,"chr2",130575944,130576633,"+",0,"NA","exon (NM_011025, exon 1 of 3)","exon (NM_011025, exon 1 of 3)",119,"NM_011025",18429,"Mm.16745","NM_011025","ENSMUSG00000027301","Oxt","OT|Oxy","oxytocin","protein-coding"]
[2364,"chr4",129992026,129993782,"+",0,"NA","intron (NM_173071, intron 2 of 29)","intron (NM_173071, intron 2 of 29)",850,"NM_001290715",230775,"Mm.262241","NM_173071","ENSMUSG00000028782","Adgrb2","Bai2","adhesion G protein-coupled receptor B2","protein-coding"]
[1640,"chr19",5050504,5051856,"+",0,"NA","exon (NM_145495, exon 2 of 10)","exon (NM_145495, exon 2 of 10)",372,"NM_145495",225870,"Mm.271922","NM_145495","ENSMUSG00000024883","Rin1","-","Ras and Rab interactor 1","protein-coding"]
[173,"chr1",191062674,191063450,"+",0,"NA","promoter-TSS (NM_001163421)","promoter-TSS (NM_001163421)",41,"NM_198654",381318,"Mm.32504","NM_198654","ENSMUSG00000062510","Nsl1","4833432M17Rik|AI451597|Gm105|Gm984","NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)","protein-coding"]
[530,"chr11",77492867,77494184,"+",0,"NA","5' UTR (NM_001004144, exon 1 of 20)","5' UTR (NM_001004144, exon 1 of 20)",113,"NM_001004144",216963,"Mm.290182","NM_001004144","ENSMUSG00000011877","Git1","Cat-1|p95Cat","G protein-coupled receptor kinase-interactor 1","protein-coding"]
[66,"chr1",78657863,78658577,"+",0,"NA","promoter-TSS (NM_001136226)","promoter-TSS (NM_001136226)",-220,"NM_001136226",195434,"Mm.276016","NM_001001981","ENSMUSG00000079470","Utp14b","4932411L21Rik|jsd","UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast)","protein-coding"]
[2709,"chr5",144190121,144190671,"+",0,"NA","intron (NM_010800, intron 1 of 1)","intron (NM_010800, intron 1 of 1)",110,"NM_010800",17341,"Mm.386767","NM_010800","ENSMUSG00000052271","Bhlha15","1810009C13Rik|Bhlhb8|MIST-1|Mist1","basic helix-loop-helix family, member a15","protein-coding"]
[3067,"chr7",138845874,138846546,"+",0,"NA","promoter-TSS (NM_026391)","promoter-TSS (NM_026391)",57,"NM_001045483",69546,"Mm.31598","NM_027115","ENSMUSG00000041775","Mapk1ip1","2310009E07Rik|AU043776|MISS","mitogen-activated protein kinase 1 interacting protein 1","protein-coding"]
[2675,"chr5",137528203,137530039,"+",0,"NA","TTS (NR_105846)","TTS (NR_105846)",473,"NR_105846",102465227,null,"NR_105846","ENSMUSG00000098597","Mir6418","Gm27629|mir-6418|mmu-mir-6418","microRNA 6418","ncRNA"]
[470,"chr11",62820050,62821107,"+",0,"NA","exon (NM_053169, exon 1 of 6)","exon (NM_053169, exon 1 of 6)",325,"NM_053169",94092,"Mm.117087","NM_053169","ENSMUSG00000047821","Trim16","9130006M08Rik|AI482483|EBBP","tripartite motif-containing 16","protein-coding"]
[2026,"chr2",158624674,158625566,"+",0,"NA","5' UTR (NM_175419, exon 1 of 9)","5' UTR (NM_175419, exon 1 of 9)",207,"NM_175419",109275,"Mm.27747","NM_175419","ENSMUSG00000037761","Actr5","AA545173|B430109J19Rik","ARP5 actin-related protein 5","protein-coding"]
[1524,"chr18",3507675,3508233,"+",0,"NA","promoter-TSS (NM_026505)","promoter-TSS (NM_026505)",-3,"NM_026505",68010,"Mm.284863","NM_026505","ENSMUSG00000024232","Bambi","2610003H06Rik","BMP and activin membrane-bound inhibitor","protein-coding"]
[3130,"chr8",25602113,25602961,"+",0,"NA","5' UTR (NM_001001735, exon 1 of 10)","5' UTR (NM_001001735, exon 1 of 10)",253,"NM_001308482",234135,"Mm.217337","NM_001001735","ENSMUSG00000054823","Whsc1l1","6720429E03|A530023P05|AI528490|NSD3|WHISTLE","Wolf-Hirschhorn syndrome candidate 1-like 1 (human)","protein-coding"]
[2360,"chr4",129105295,129105861,"+",0,"NA","promoter-TSS (NM_001290706)","promoter-TSS (NM_001290706)",30,"NM_001290706",66260,"Mm.25295","NM_025452","ENSMUSG00000028786","Tmem54","1810017F10Rik|AI507302","transmembrane protein 54","protein-coding"]
[793,"chr12",86678461,86679307,"+",0,"NA","5' UTR (NM_177354, exon 1 of 7)","5' UTR (NM_177354, exon 1 of 7)",184,"NM_177354",238328,"Mm.216101","NM_177354",null,"Vash1","AI834978|D930046M13Rik|G630009D10Rik","vasohibin 1","protein-coding"]
[1205,"chr15",97246871,97247906,"+",0,"NA","promoter-TSS (NM_178114)","promoter-TSS (NM_178114)",-101,"NM_001164602",105827,"Mm.24005","NM_178114","ENSMUSG00000048218","Amigo2","AI415330|AMIGO-2|AW208913|Ali1","adhesion molecule with Ig like domain 2","protein-coding"]
[1287,"chr16",21204532,21205392,"+",0,"NA","5' UTR (NM_010143, exon 1 of 16)","5' UTR (NM_010143, exon 1 of 16)",167,"NM_010143",13845,"Mm.6972","NM_010143","ENSMUSG00000005958","Ephb3","AW456895|Cek10|Etk2|HEK2|MDK5|Sek4|Tyro6","Eph receptor B3","protein-coding"]
[1696,"chr19",16955478,16956293,"+",0,"NA","promoter-TSS (NM_181348)","promoter-TSS (NM_181348)",-233,"NM_181348",353211,"Mm.257354","NM_181348","ENSMUSG00000039126","Prune2","6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367","prune homolog 2 (Drosophila)","protein-coding"]
[3168,"chr8",70597443,70598178,"+",0,"NA","TTS (NM_023627)","TTS (NM_023627)",3329,"NM_023627",71780,"Mm.29357","NM_023627","ENSMUSG00000019139","Isyna1","1300017C10Rik|AU018670","myo-inositol 1-phosphate synthase A1","protein-coding"]
[2403,"chr4",138972786,138973680,"+",0,"NA","5' UTR (NM_029857, exon 1 of 17)","5' UTR (NM_029857, exon 1 of 17)",328,"NM_029857",77056,"Mm.122336","NM_029857","ENSMUSG00000041143","Tmco4","4632413C14Rik|AI430825","transmembrane and coiled-coil domains 4","protein-coding"]
[654,"chr11",113649411,113650084,"+",0,"NA","exon (NM_013581, exon 1 of 14)","exon (NM_013581, exon 1 of 14)",218,"NM_013581",16834,"Mm.261620","NM_013581","ENSMUSG00000018661","Cog1","6030445I15|Ldlb|mKIAA1381","component of oligomeric golgi complex 1","protein-coding"]
[2261,"chr4",43957283,43958577,"+",0,"NA","intron (NM_027450, intron 1 of 4)","CpG",228,"NM_027450",384009,"Mm.22213","NM_027450","ENSMUSG00000028480","Glipr2","5730414A08Rik|C77180|GAPR-1","GLI pathogenesis-related 2","protein-coding"]
[3469,"chr9",108569666,108570398,"+",0,"NA","exon (NM_026378, exon 1 of 12)","exon (NM_026378, exon 1 of 12)",140,"NM_026378",67789,"Mm.458081","NM_026378","ENSMUSG00000019039","Dalrd3","6330580J24Rik|C77829|mir-425","DALR anticodon binding domain containing 3","protein-coding"]
[283,"chr10",80115132,80116455,"+",0,"NA","promoter-TSS (NM_001301854)","promoter-TSS (NM_001301854)",-10,"NM_001301853",20869,"Mm.44231","NM_011492","ENSMUSG00000003068","Stk11","AA408040|Lkb1|Par-4|R75140","serine/threonine kinase 11","protein-coding"]
[156,"chr1",175880428,175881136,"+",0,"NA","promoter-TSS (NM_012012)","promoter-TSS (NM_012012)",4,"NM_012012",26909,"Mm.283046","NM_012012",null,"Exo1","5730442G03Rik|Msa","exonuclease 1","protein-coding"]
[3414,"chr9",72958429,72959111,"+",0,"NA","promoter-TSS (NM_001163725)","promoter-TSS (NM_001163725)",-15,"NM_026314",67685,"Mm.31817","NM_026314","ENSMUSG00000092192","Dyx1c1","1700010I24Rik|EKN1|b2b811Clo","dyslexia susceptibility 1 candidate 1 homolog (human)","protein-coding"]
[59,"chr1",74900284,74900854,"+",0,"NA","TTS (NR_029876)","TTS (NR_029876)",152,"NR_029876",723900,null,"NR_029876","ENSMUSG00000065616","Mir375","Mirn375|mir-375|mmu-mir-375","microRNA 375","ncRNA"]
[3388,"chr9",58487745,58489466,"+",0,"NA","promoter-TSS (NM_176921)","promoter-TSS (NM_176921)",2,"NM_176921",319477,"Mm.153674","NM_176921","ENSMUSG00000066607","6030419C18Rik","-","RIKEN cDNA 6030419C18 gene","protein-coding"]
[3329,"chr9",21320620,21321167,"+",0,"NA","intron (NM_001199186, intron 1 of 21)","intron (NM_001199186, intron 1 of 21)",174,"NM_001199186",68682,"Mm.148425","NM_152808","ENSMUSG00000057193","Slc44a2","1110028E10Rik|CTL2","solute carrier family 44, member 2","protein-coding"]
[2091,"chr3",31094528,31095131,"+",0,"NA","promoter-TSS (NM_011386)","promoter-TSS (NM_011386)",-229,"NM_011386",20482,"Mm.15406","NM_011386","ENSMUSG00000027660","Skil","Skir|SnoN|sno","SKI-like","protein-coding"]
[1971,"chr2",129296791,129297477,"+",0,"NA","promoter-TSS (NM_181589)","promoter-TSS (NM_181589)",78,"NM_181589",70466,"Mm.45785","NM_181589","ENSMUSG00000048327","Ckap2l","2010016H04Rik|2610318C08Rik|AV070319|radmis|rdm","cytoskeleton associated protein 2-like","protein-coding"]
[2358,"chr4",128992977,128994025,"+",0,"NA","intron (NM_001033966, intron 1 of 5)","CpG",277,"NM_001033966",11637,"Mm.29460","NM_016895","ENSMUSG00000028792","Ak2","Ak-2|D4Ertd220e","adenylate kinase 2","protein-coding"]
[1226,"chr15",101292954,101293753,"+",0,"NA","non-coding (NR_033803, exon 1 of 2)","non-coding (NR_033803, exon 1 of 2)",141,"NR_033803",77717,"Mm.391998","NR_033803","ENSMUSG00000075408","6030408B16Rik","AI225877","RIKEN cDNA 6030408B16 gene","ncRNA"]
[2498,"chr5",31192663,31194006,"+",0,"NA","promoter-TSS (NM_153680)","promoter-TSS (NM_153680)",30,"NM_153680",266781,"Mm.6118","NM_153680","ENSMUSG00000029146","Snx17","5830447M19Rik|AI790646|D5Ertd260e|b2b1625.1Clo|mKIAA0064","sorting nexin 17","protein-coding"]
[1256,"chr16",13940544,13941259,"+",0,"NA","exon (NM_001289561, exon 1 of 4)","exon (NM_001289561, exon 1 of 4)",236,"NM_033564",93734,"Mm.76554","NM_033564","ENSMUSG00000022679","Mpv17l","M-LP","Mpv17 transgene, kidney disease mutant-like","protein-coding"]
[1949,"chr2",119897006,119897779,"+",0,"NA","intron (NM_001164274, intron 1 of 22)","CpG",164,"NM_013720",29808,"Mm.87532","NM_013720","ENSMUSG00000033943","Mga","AV312082|C130042M01Rik|C80739|D030062C11Rik|Mad5","MAX gene associated","protein-coding"]
[2247,"chr4",34550402,34551444,"+",0,"NA","5' UTR (NM_001007589, exon 1 of 5)","5' UTR (NM_001007589, exon 1 of 5)",308,"NM_001007589",433693,"Mm.389532","NM_026019","ENSMUSG00000028291","Akirin2","2700059D21Rik|AA114675|AA522011|AU019887|Akirin-2","akirin 2","protein-coding"]
[1744,"chr19",46003335,46004759,"+",0,"NA","exon (NM_176785, exon 1 of 1)","exon (NM_176785, exon 1 of 1)",569,"NM_176785",20170,"Mm.101110","NM_176785","ENSMUSG00000074811","Hps6","5330434M19Rik|BLOC2|ru","Hermansky-Pudlak syndrome 6","protein-coding"]
[1853,"chr2",32535131,32535954,"+",0,"NA","5' UTR (NM_153560, exon 1 of 11)","5' UTR (NM_153560, exon 1 of 11)",183,"NM_153560",98952,"Mm.4065","NM_153560","ENSMUSG00000039157","Fam102a","AI426465|C230093N12Rik|Eeig1","family with sequence similarity 102, member A","protein-coding"]
[864,"chr13",25055841,25056489,"+",0,"NA","5' UTR (NM_001195617, exon 1 of 8)","5' UTR (NM_001195617, exon 1 of 8)",161,"NM_177577",195208,"Mm.284719","NM_177577","ENSMUSG00000035910","Dcdc2a","AW492955|Dcdc2|RU2","doublecortin domain containing 2a","protein-coding"]
[2913,"chr7",30588823,30589617,"+",0,"NA","promoter-TSS (NM_029274)","promoter-TSS (NM_029274)",-160,"NR_106134",102465774,null,"NR_106134","ENSMUSG00000098553","Mir3569","Gm27279|mmu-mir-3569","microRNA 3569","ncRNA"]
[219,"chr10",43220986,43221603,"+",0,"NA","promoter-TSS (NM_001168289)","promoter-TSS (NM_001168289)",-192,"NM_027772",71365,"Mm.490430","NM_027772","ENSMUSG00000038240","Pdss2","5430420P03Rik|Gm60|Plmp|kd|mDLP1","prenyl (solanesyl) diphosphate synthase, subunit 2","protein-coding"]
[1016,"chr14",47276562,47277419,"+",0,"NA","promoter-TSS (NM_172598)","promoter-TSS (NM_172598)",-133,"NM_172598",218973,"Mm.265615","NM_172598","ENSMUSG00000037572","Wdhd1","A630092E18|AND-1|D630024B06Rik","WD repeat and HMG-box DNA binding protein 1","protein-coding"]
[2480,"chr5",24590911,24592466,"+",0,"NA","promoter-TSS (NR_030423)","promoter-TSS (NR_030423)",-426,"NR_030423",735264,null,"NR_030423","ENSMUSG00000076387","Mir671","Mirn671|mmu-mir-671","microRNA 671","ncRNA"]
[2300,"chr4",98923655,98924335,"+",0,"NA","5' UTR (NM_146144, exon 1 of 9)","5' UTR (NM_146144, exon 1 of 9)",185,"NM_146144",230484,"Mm.371692","NM_146144","ENSMUSG00000028560","Usp1","-","ubiquitin specific peptidase 1","protein-coding"]
[799,"chr12",99964283,99966346,"+",0,"NA","5' UTR (NM_146037, exon 2 of 3)","5' UTR (NM_146037, exon 2 of 3)",815,"NM_001164427",217826,"Mm.312335","NM_146037","ENSMUSG00000045404","Kcnk13","BB085247|F730021E22Rik|Gm1570|Gm1685","potassium channel, subfamily K, member 13","protein-coding"]
[1170,"chr15",80710987,80711618,"+",0,"NA","promoter-TSS (NM_144812)","promoter-TSS (NM_144812)",-11,"NM_144812",213988,"Mm.131328","NM_144812","ENSMUSG00000047888","Tnrc6b","2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik","trinucleotide repeat containing 6b","protein-coding"]
[925,"chr13",73626668,73627978,"+",0,"NA","intron (NM_009354, intron 1 of 15)","intron (NM_009354, intron 1 of 15)",322,"NM_009354",21752,"Mm.10109","NM_009354","ENSMUSG00000021611","Tert","EST2|TCS1|TP2|TR|TRT","telomerase reverse transcriptase","protein-coding"]
[3382,"chr9",57503387,57504834,"+",0,"NA","promoter-TSS (NM_133982)","promoter-TSS (NM_133982)",8,"NM_133982",102614,"Mm.274421","NM_133982","ENSMUSG00000062309","Rpp25","AI851155","ribonuclease P/MRP 25 subunit","protein-coding"]
[1896,"chr2",71786882,71787943,"+",0,"NA","intron (NM_001277970, intron 1 of 24)","CpG",473,"NM_001277970",16403,"Mm.225096","NM_008397",null,"Itga6","5033401O05Rik|AI115430|Cd49f|VLA-6","integrin alpha 6","protein-coding"]
[390,"chr11",17159207,17160101,"+",0,"NA","intron (NM_024459, intron 1 of 5)","CpG",356,"NM_024459",19058,"Mm.41840","NM_024459","ENSMUSG00000033953","Ppp3r1","CaNB1|Cnb1|MCIP1","protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)","protein-coding"]
[2895,"chr7",27605387,27606115,"+",0,"NA","promoter-TSS (NM_007434)","promoter-TSS (NM_007434)",-109,"NM_007434",11652,"Mm.177194","NM_007434","ENSMUSG00000004056","Akt2","2410016A19Rik|AW554154|PKB|PKBbeta","thymoma viral proto-oncogene 2","protein-coding"]
[3357,"chr9",45370062,45371329,"+",0,"NA","intron (NM_022004, intron 1 of 7)","intron (NM_022004, intron 1 of 7)",510,"NM_022004",59095,"Mm.208287","NM_022004","ENSMUSG00000066705","Fxyd6","0610030I18Rik|Php","FXYD domain-containing ion transport regulator 6","protein-coding"]
[2368,"chr4",130792036,130793354,"+",0,"NA","exon (NM_011520, exon 1 of 5)","exon (NM_011520, exon 1 of 5)",158,"NM_011520",20970,"Mm.206536","NM_011520","ENSMUSG00000025743","Sdc3","Synd3|mKIAA0468|syn-3","syndecan 3","protein-coding"]
[1042,"chr14",63436044,63436797,"+",0,"NA","promoter-TSS (NM_177628)","promoter-TSS (NM_177628)",26,"NM_177628",219148,"Mm.37882","NM_177628","ENSMUSG00000035095","Fam167a","A030013D21","family with sequence similarity 167, member A","protein-coding"]
[1515,"chr17",84511658,84512346,"+",0,"NA","intron (NM_177606, intron 1 of 29)","CpG",107,"NM_177606",213556,"Mm.215159","NM_177606","ENSMUSG00000040852","Plekhh2","AI256725|E030001K05|mKIAA2028","pleckstrin homology domain containing, family H (with MyTH4 domain) member 2","protein-coding"]
[1686,"chr19",9982319,9983110,"+",0,"NA","promoter-TSS (NM_010239)","promoter-TSS (NM_010239)",68,"NM_010239",14319,"Mm.1776","NM_010239","ENSMUSG00000024661","Fth1","FHC|Fth|HFt|MFH","ferritin heavy polypeptide 1","protein-coding"]
[38,"chr1",57995717,57996350,"+",0,"NA","promoter-TSS (NM_199007)","promoter-TSS (NM_199007)",59,"NM_199007",68549,"Mm.32800","NM_199007","ENSMUSG00000026039","Sgol2a","1110007N04Rik|4932411A20Rik|5730576N04Rik|AU018846|AV008062|D1Ertd8e|Sgol2|Tripin","shugoshin-like 2a (S. pombe)","protein-coding"]
[1955,"chr2",122348685,122349282,"+",0,"NA","TTS (NM_001013829)","TTS (NM_001013829)",19935,"NM_001013829",435684,"Mm.458215","NM_001013829","ENSMUSG00000033256","Shf","-","Src homology 2 domain containing F","protein-coding"]
[196,"chr10",17722729,17724535,"+",0,"NA","intron (NM_010828, intron 1 of 1)","CpG",404,"NM_010828",17684,"Mm.272321","NM_010828","ENSMUSG00000039910","Cited2","AI835299|ER154-like|Mrg1|Msg2|p35srj","Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2","protein-coding"]
[945,"chr13",98353745,98355039,"+",0,"NA","5' UTR (NM_008242, exon 1 of 1)","5' UTR (NM_008242, exon 1 of 1)",147,"NM_008242",15229,"Mm.347441","NM_008242","ENSMUSG00000078302","Foxd1","AI385632|BF-2|FREAC4|Hfh10|Hfhbf2","forkhead box D1","protein-coding"]
[1169,"chr15",80671293,80672600,"+",0,"NA","promoter-TSS (NM_145986)","promoter-TSS (NM_145986)",99,"NM_145986",213956,"Mm.132439","NM_145986","ENSMUSG00000022408","Fam83f","AW544981","family with sequence similarity 83, member F","protein-coding"]
[2784,"chr6",83325854,83326451,"+",0,"NA","5' UTR (NM_145571, exon 1 of 6)","5' UTR (NM_145571, exon 1 of 6)",113,"NM_145571",232157,"Mm.29500","NM_145571","ENSMUSG00000043131","Mob1a","4022402H07Rik|MOB1|MOB4B|Mobk1b|Mobkl1b","MOB kinase activator 1A","protein-coding"]
[206,"chr10",34297388,34297993,"+",0,"NA","exon (NM_030203, exon 1 of 1)","exon (NM_030203, exon 1 of 1)",269,"NM_030203",72480,"Mm.21485","NM_030203","ENSMUSG00000039485","Tspyl4","2610102M01Rik|B230210I21Rik|D10Bwg0791e","TSPY-like 4","protein-coding"]
[118,"chr1",134415158,134416038,"+",0,"NA","promoter-TSS (NM_001306069)","promoter-TSS (NM_001306069)",-66,"NM_001306069",72674,"Mm.259976","NM_028320",null,"Adipor1","2810031L11Rik|ACDCR1|CGI-45|Paqr1","adiponectin receptor 1","protein-coding"]
[959,"chr13",112993472,112994560,"+",0,"NA","intron (NM_001037914, intron 1 of 6)","CpG",148,"NM_001037914",622408,"Mm.360976","NM_001037914","ENSMUSG00000074651","Mcidas","EG622408|Gm6320|Idas|Mci|Mcin","multiciliate differentiation and DNA synthesis associated cell cycle protein","protein-coding"]
[1674,"chr19",7416626,7417648,"+",0,"NA","promoter-TSS (NM_175381)","promoter-TSS (NM_175381)",-488,"NM_175381",108899,"Mm.386838","NM_175381","ENSMUSG00000053080","2700081O15Rik","AI255177|AI848741|AW742297","RIKEN cDNA 2700081O15 gene","protein-coding"]
[3194,"chr8",84132603,84133256,"+",0,"NA","TTS (NM_001013384)","TTS (NM_001013384)",6940,"NM_001013384",244550,"Mm.334654","NM_001013384","ENSMUSG00000012889","Podnl1","5832418A03Rik|Gm506","podocan-like 1","protein-coding"]
[358,"chr10",127055993,127056981,"+",0,"NA","3' UTR (NM_001033262, exon 4 of 4)","3' UTR (NM_001033262, exon 4 of 4)",3697,"NM_001033262",216438,"Mm.37892","NM_001033262",null,"2009-03-01","AI608492|BC019560","membrane-associated ring finger (C3HC4) 9","protein-coding"]
[331,"chr10",94688597,94689163,"+",0,"NA","promoter-TSS (NM_029852)","promoter-TSS (NM_029852)",90,"NM_029852",77048,"Mm.296971","NM_029852","ENSMUSG00000020024","Cep83","2600001G24Rik|4921537D05Rik|5730513H21Rik|Ccdc41","centrosomal protein 83","protein-coding"]
[1065,"chr14",99045422,99046700,"+",0,"NA","promoter-TSS (NM_175245)","promoter-TSS (NM_175245)",75,"NM_175245",76789,"Mm.38912","NM_175245","ENSMUSG00000033186","Mzt1","2410129H14Rik|AI120158|Mozart1","mitotic spindle organizing protein 1","protein-coding"]
[1659,"chr19",6276324,6277519,"+",0,"NA","promoter-TSS (NM_010119)","promoter-TSS (NM_010119)",25,"NM_010119",13660,"Mm.30169","NM_010119","ENSMUSG00000024772","Ehd1","AA409636|Past1|RME-1","EH-domain containing 1","protein-coding"]
[2746,"chr6",41605063,41605918,"+",0,"NA","promoter-TSS (NM_007680)","promoter-TSS (NM_007680)",8,"NM_007680",13848,"Mm.271976","NM_007680","ENSMUSG00000029869","Ephb6","Cekl|Mep","Eph receptor B6","protein-coding"]
[737,"chr12",31073844,31074503,"+",0,"NA","exon (NM_027828, exon 1 of 2)","exon (NM_027828, exon 1 of 2)",205,"NM_027828",104943,"Mm.248938","NM_027828","ENSMUSG00000036136","Fam110c","9030611O19Rik|AU019489","family with sequence similarity 110, member C","protein-coding"]
[767,"chr12",77237857,77239787,"+",0,"NA","promoter-TSS (NR_045554)","promoter-TSS (NR_045554)",83,"NR_045554",53618,"Mm.35628","NM_016893","ENSMUSG00000021065","Fut8","-","fucosyltransferase 8","protein-coding"]
[3037,"chr7",126271730,126273333,"+",0,"NA","promoter-TSS (NM_145587)","promoter-TSS (NM_145587)",-88,"NM_145587",104175,"Mm.29660","NM_145587","ENSMUSG00000042978","Sbk1","Sbk","SH3-binding kinase 1","protein-coding"]
[2228,"chr4",8689956,8691337,"+",0,"NA","5' UTR (NM_001277149, exon 1 of 38)","5' UTR (NM_001277149, exon 1 of 38)",240,"NM_001277149",320790,"Mm.138792","NM_001033395","ENSMUSG00000041235","Chd7","A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis","chromodomain helicase DNA binding protein 7","protein-coding"]
[2070,"chr2",180024673,180026011,"+",0,"NA","intron (NM_177727, intron 1 of 8)","CpG",355,"NM_177727",241846,"Mm.21577","NM_177727","ENSMUSG00000039108","Lsm14b","9430078B04|BC040823","LSM14 homolog B (SCD6, S. cerevisiae)","protein-coding"]
[2173,"chr3",103967894,103968928,"+",0,"NA","promoter-TSS (NR_030676)","promoter-TSS (NR_030676)",-95,"NR_030676",100125931,"Mm.400392","NR_030676","ENSMUSG00000089998","Phtf1os","A130049A11Rik","putative homeodomain transcription factor 1, opposite strand","ncRNA"]
[1020,"chr14",54360758,54361507,"+",0,"NA","intron (NM_026936, intron 1 of 9)","CpG",291,"NM_026936",69089,"Mm.182340","NM_026936","ENSMUSG00000000959","Oxa1l","1810020M02Rik|AI894287","oxidase assembly 1-like","protein-coding"]
[805,"chr12",102468911,102469718,"+",0,"NA","promoter-TSS (NM_013747)","promoter-TSS (NM_013747)",180,"NM_001199004",27277,"Mm.273370","NM_013747","ENSMUSG00000021192","Golga5","Ret-II","golgi autoantigen, golgin subfamily a, 5","protein-coding"]
[84,"chr1",91366159,91366857,"+",0,"NA","promoter-TSS (NM_173395)","promoter-TSS (NM_173395)",78,"NM_173395",227358,"Mm.389157","NM_173395","ENSMUSG00000047443","Fam132b","4832406C22|myonectin","family with sequence similarity 132, member B","protein-coding"]
[437,"chr11",53769708,53770745,"+",0,"NA","promoter-TSS (NM_001159396)","promoter-TSS (NM_001159396)",212,"NM_008390",16362,"Mm.105218","NM_008390","ENSMUSG00000018899","Irf1","AU020929|Irf-1","interferon regulatory factor 1","protein-coding"]
[194,"chr10",13552844,13553348,"+",0,"NA","promoter-TSS (NM_001164195)","promoter-TSS (NM_001164195)",46,"NM_019961",56535,"Mm.282711","NM_019961","ENSMUSG00000019809","Pex3","1700014F15Rik|2810027F19Rik|2900010N04Rik","peroxisomal biogenesis factor 3","protein-coding"]
[3503,"chr9",121897988,121898776,"+",0,"NA","promoter-TSS (NM_021609)","promoter-TSS (NM_021609)",27,"NM_021609",59289,"Mm.258105","NM_021609","ENSMUSG00000044534","Ackr2","AI464239|CCR10|CCR9|Ccbp2|Cmkbr9|D6","atypical chemokine receptor 2","protein-coding"]
[2749,"chr6",47877299,47878225,"+",0,"NA","exon (NM_146175, exon 1 of 8)","exon (NM_146175, exon 1 of 8)",207,"NM_146175",101095,"Mm.440186","NM_146175","ENSMUSG00000025821","Zfp282","AI449432|C81429|E430019K09Rik|HUB1","zinc finger protein 282","protein-coding"]
[1768,"chr19",60755717,60757272,"+",0,"NA","exon (NM_178421, exon 1 of 1)","exon (NM_178421, exon 1 of 1)",507,"NM_178421",332397,"Mm.186390","NM_178421","ENSMUSG00000072437","Nanos1","NOS-1","nanos homolog 1 (Drosophila)","protein-coding"]
[220,"chr10",43579099,43580239,"+",0,"NA","intron (NM_009846, intron 1 of 1)","intron (NM_009846, intron 1 of 1)",500,"NM_009846",12484,"Mm.29742","NM_009846","ENSMUSG00000047139","Cd24a","Cd24|HSA|Ly-52|nectadrin","CD24a antigen","protein-coding"]
[1312,"chr16",36693753,36694458,"+",0,"NA","5' UTR (NM_001285791, exon 1 of 7)","5' UTR (NM_001285791, exon 1 of 7)",127,"NM_001285791",106347,"Mm.17807","NM_134109","ENSMUSG00000022900","Ildr1","AU041483|AU044638","immunoglobulin-like domain containing receptor 1","protein-coding"]
[2395,"chr4",137861822,137862865,"+",0,"NA","5' UTR (NM_199307, exon 1 of 20)","5' UTR (NM_199307, exon 1 of 20)",106,"NM_199307",230857,"Mm.401062","NM_199307","ENSMUSG00000057530","Ece1","AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d","endothelin converting enzyme 1","protein-coding"]
[2365,"chr4",130047314,130048425,"+",0,"NA","promoter-TSS (NM_028266)","promoter-TSS (NM_028266)",29,"NM_028266",107581,"Mm.41860","NM_028266","ENSMUSG00000040690","Col16a1","2700007F12Rik|A530052M23Rik|AI838662|CA1F","collagen, type XVI, alpha 1","protein-coding"]
[1021,"chr14",54426646,54427279,"+",0,"NA","promoter-TSS (NM_026851)","promoter-TSS (NM_026851)",53,"NM_026851",68836,"Mm.248163","NM_026851","ENSMUSG00000010406","Mrpl52","1110047B07Rik","mitochondrial ribosomal protein L52","protein-coding"]
[1263,"chr16",17232970,17234433,"+",0,"NA","5' UTR (NM_178922, exon 1 of 3)","5' UTR (NM_178922, exon 1 of 3)",114,"NM_178922",58180,"Mm.261602","NM_178922","ENSMUSG00000050240","Hic2","AA409108|HRG22|mKIAA1020","hypermethylated in cancer 2","protein-coding"]
[934,"chr13",92425778,92426530,"+",0,"NA","5' UTR (NM_175455, exon 1 of 5)","5' UTR (NM_175455, exon 1 of 5)",185,"NM_175455",218440,"Mm.213623","NM_175455","ENSMUSG00000045034","Ankrd34b","6430502M16Rik|DP58","ankyrin repeat domain 34B","protein-coding"]
[1989,"chr2",145934260,145934983,"+",0,"NA","promoter-TSS (NM_025820)","promoter-TSS (NM_025820)",79,"NM_025820",66877,"Mm.248755","NM_025820","ENSMUSG00000001767","Crnkl1","1200013P10Rik|5730590A01Rik|C80326|crn","Crn, crooked neck-like 1 (Drosophila)","protein-coding"]
[948,"chr13",104228471,104229182,"+",0,"NA","promoter-TSS (NM_172807)","promoter-TSS (NM_172807)",18,"NM_172807",238831,"Mm.98910","NM_172807","ENSMUSG00000021713","Ppwd1","4632422M10Rik|A330090G21Rik","peptidylprolyl isomerase domain and WD repeat containing 1","protein-coding"]
[2160,"chr3",96635298,96636079,"+",0,"NA","promoter-TSS (NM_001162388)","promoter-TSS (NM_001162388)",-159,"NM_001162388",18632,"Mm.20901","NM_011069","ENSMUSG00000028102","Pex11b","PEX11beta|Pex11pbeta","peroxisomal biogenesis factor 11 beta","protein-coding"]
[572,"chr11",87760290,87760971,"+",0,"NA","promoter-TSS (NM_172449)","promoter-TSS (NM_172449)",89,"NM_172449",207777,"Mm.342019","NM_172449","ENSMUSG00000034156","Bzrap1","D230016K05|PRAX-1|mKIAA0612","benzodiazepine receptor associated protein 1","protein-coding"]
[2450,"chr4",155249596,155250329,"+",0,"NA","promoter-TSS (NM_001190445)","promoter-TSS (NM_001190445)",-4,"NM_001190445",67513,"Mm.10374","NM_001190445","ENSMUSG00000073684","Faap20","2610002J02Rik","Fanconi anemia core complex associated protein 20","protein-coding"]
[1398,"chr17",25808655,25809898,"+",0,"NA","5' UTR (NM_001164225, exon 1 of 6)","5' UTR (NM_001164225, exon 1 of 6)",191,"NM_001164225",214931,"Mm.152289","NM_001164225","ENSMUSG00000025738","Fbxl16","BC042620|Scirr1","F-box and leucine-rich repeat protein 16","protein-coding"]
[226,"chr10",52233558,52234193,"+",0,"NA","intron (NM_025705, intron 1 of 10)","CpG",256,"NM_025705",66686,"Mm.62982","NM_025705","ENSMUSG00000019891","Dcbld1","4631413K11Rik","discoidin, CUB and LCCL domain containing 1","protein-coding"]
[527,"chr11",76407007,76407503,"+",0,"NA","exon (NM_023355, exon 1 of 3)","exon (NM_023355, exon 1 of 3)",112,"NM_019818",56322,"Mm.18803","NM_019818","ENSMUSG00000020843","Timm22","Tim22","translocase of inner mitochondrial membrane 22","protein-coding"]
[1430,"chr17",31125279,31125963,"+",0,"NA","intron (NM_011575, intron 2 of 2)","intron (NM_011575, intron 2 of 2)",3990,"NM_011575",21786,"Mm.4641","NM_011575","ENSMUSG00000024029","Tff3","ITF|mITF","trefoil factor 3, intestinal","protein-coding"]
[1145,"chr15",76593802,76595822,"+",0,"NA","TTS (NM_001164173)","TTS (NM_001164173)",12779,"NM_053193",94230,"Mm.45141","NM_053193","ENSMUSG00000034022","Cpsf1","-","cleavage and polyadenylation specific factor 1","protein-coding"]
[1870,"chr2",36136238,36136906,"+",0,"NA","non-coding (NR_027515, exon 1 of 6)","non-coding (NR_027515, exon 1 of 6)",132,"NM_026434",67889,"Mm.205937","NM_026434","ENSMUSG00000026889","Rbm18","2010004P11Rik|AU015530","RNA binding motif protein 18","protein-coding"]
[2549,"chr5",75574505,75576077,"+",0,"NA","intron (NM_001122733, intron 1 of 20)","CpG",300,"NM_021099",16590,"Mm.247073","NM_021099","ENSMUSG00000005672","Kit","Bs|CD117|Fdc|Gsfsco1|Gsfsco5|Gsfsow3|SCO1|SCO5|SOW3|Ssm|Tr-kit|W|c-KIT","kit oncogene","protein-coding"]
[1448,"chr17",35000706,35001900,"+",0,"NA","promoter-TSS (NM_033075)","promoter-TSS (NM_033075)",396,"NM_011690",22321,"Mm.28420","NM_011690","ENSMUSG00000007029","Vars","Bat6|D17H6S56E|G7a|Vars2","valyl-tRNA synthetase","protein-coding"]
[3229,"chr8",104170498,104171369,"+",0,"NA","5' UTR (NM_001141925, exon 1 of 5)","5' UTR (NM_001141925, exon 1 of 5)",420,"NM_001141925",65115,"Mm.41849","NM_001141922","ENSMUSG00000031872","Bean1","Bean","brain expressed, associated with Nedd4, 1","protein-coding"]
[2466,"chr5",8422129,8423180,"+",0,"NA","promoter-TSS (NM_001190717)","promoter-TSS (NM_001190717)",62,"NM_013726",27214,"Mm.292470","NM_013726","ENSMUSG00000002297","Dbf4","AA545217|Ask","DBF4 homolog (S. cerevisiae)","protein-coding"]
[62,"chr1",75374855,75375897,"+",0,"NA","promoter-TSS (NM_007463)","promoter-TSS (NM_007463)",79,"NM_007463",11790,"Mm.275397","NM_007463","ENSMUSG00000026207","Speg","AW125581|Apeg1|BPEG|D1Bwg1450e|SPEGalpha|SPEGbeta|mKIAA1297","SPEG complex locus","protein-coding"]
[833,"chr12",111758331,111759617,"+",0,"NA","5' UTR (NM_001025360, exon 1 of 16)","5' UTR (NM_001025360, exon 1 of 16)",106,"NM_001025361",16593,"Mm.278357","NM_008450","ENSMUSG00000021288","Klc1","AI874768|Kns2","kinesin light chain 1","protein-coding"]
[3146,"chr8",46551649,46552285,"+",0,"NA","promoter-TSS (NM_027973)","promoter-TSS (NM_027973)",-102,"NM_027973",71876,"Mm.22108","NM_027973","ENSMUSG00000031629","Cenpu","1700029A22Rik|Mlf1ip","centromere protein U","protein-coding"]
[2743,"chr6",38662640,38663294,"+",0,"NA","promoter-TSS (NM_001101507)","promoter-TSS (NM_001101507)",-102,"NM_001101507",665180,"Mm.349066","NM_001101507","ENSMUSG00000079598","Clec2l","AI414054|AW122724|Gm1064","C-type lectin domain family 2, member L","protein-coding"]
[1472,"chr17",46383388,46384575,"+",0,"NA","exon (NM_021346, exon 1 of 8)","exon (NM_021346, exon 1 of 8)",215,"NM_021346",57908,"Mm.439916","NM_021346","ENSMUSG00000015597","Zfp318","2610034E08Rik|D530032D06Rik|TZF|Znf318","zinc finger protein 318","protein-coding"]
[1573,"chr18",44380322,44381200,"+",0,"NA","intron (NM_027490, intron 1 of 10)","CpG",261,"NM_027490",70640,"Mm.87629","NM_027490","ENSMUSG00000024472","Dcp2","2410015D23Rik|5730537H01Rik|AL118268","DCP2 decapping enzyme homolog (S. cerevisiae)","protein-coding"]
[3276,"chr8",119862044,119862712,"+",0,"NA","promoter-TSS (NM_146219)","promoter-TSS (NM_146219)",73,"NM_146219",234796,"Mm.86446","NM_146219","ENSMUSG00000031828","Klhl36","-","kelch-like 36","protein-coding"]
[548,"chr11",79711240,79712048,"+",0,"NA","promoter-TSS (NR_029579)","promoter-TSS (NR_029579)",-325,"NR_029579",387188,null,"NR_029579","ENSMUSG00000065395","Mir193a","Mir193|Mirn193|mir-193a|mmu-mir-193|mmu-mir-193a","microRNA 193a","ncRNA"]
[2020,"chr2",157367477,157368027,"+",0,"NA","intron (NM_026968, intron 1 of 2)","CpG",158,"NM_026968",69161,"Mm.228619","NM_026968","ENSMUSG00000063019","Manbal","1810024K12Rik|AI836500","mannosidase, beta A, lysosomal-like","protein-coding"]
[3450,"chr9",105642836,105643434,"+",0,"NA","5' UTR (NM_001081309, exon 1 of 20)","5' UTR (NM_001081309, exon 1 of 20)",140,"NM_001081309",75669,"Mm.274830","NM_029380","ENSMUSG00000032571","Pik3r4","2210010O15Rik|C730038E05Rik|C85833|D9Ertd418e","phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 4, p150","protein-coding"]
[2575,"chr5",105699791,105700962,"+",0,"NA","promoter-TSS (NM_178701)","promoter-TSS (NM_178701)",407,"NM_001122768",231549,"Mm.23837","NM_178701","ENSMUSG00000046079","Lrrc8d","2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5","leucine rich repeat containing 8D","protein-coding"]
[1110,"chr15",55112264,55112961,"+",0,"NA","exon (NM_145470, exon 1 of 9)","exon (NM_145470, exon 1 of 9)",295,"NM_145470",97998,"Mm.295397","NM_145470","ENSMUSG00000022419","Deptor","Depdc6","DEP domain containing MTOR-interacting protein","protein-coding"]
[3466,"chr9",108347508,108348228,"+",0,"NA","promoter-TSS (NM_011678)","promoter-TSS (NM_011678)",37,"NM_011678",22258,"Mm.3974","NM_011678","ENSMUSG00000032612","Usp4","F730026I20Rik|Unp|mKIAA4155","ubiquitin specific peptidase 4 (proto-oncogene)","protein-coding"]
[2622,"chr5",121660118,121661236,"+",0,"NA","promoter-TSS (NM_028037)","promoter-TSS (NM_028037)",114,"NM_001289543",72399,"Mm.153372","NM_028227","ENSMUSG00000029458","Brap","3010002G07Rik|BRAP2|IMP","BRCA1 associated protein","protein-coding"]
[2204,"chr3",138442472,138443509,"+",0,"NA","promoter-TSS (NM_007410)","promoter-TSS (NM_007410)",-103,"NM_007410",11532,"Mm.3874","NM_007410","ENSMUSG00000028138","Adh5","Adh-5|Adh3|GSNOR","alcohol dehydrogenase 5 (class III), chi polypeptide","protein-coding"]
[1999,"chr2",152626582,152627645,"+",0,"NA","intron (NM_009047, intron 1 of 4)","CpG",105,"NM_009047",19700,"Mm.8752","NM_009047","ENSMUSG00000000359","Rem1","E030011C07Rik|Ras|Rem","rad and gem related GTP binding protein 1","protein-coding"]
[2799,"chr6",88901742,88902928,"+",0,"NA","promoter-TSS (NM_011906)","promoter-TSS (NM_011906)",84,"NM_011906",24100,"Mm.284480","NM_011906","ENSMUSG00000002871","Tpra1","40kDa|Gpr175|Tpra40","transmembrane protein, adipocyte asscociated 1","protein-coding"]
[1772,"chr2",3512129,3513399,"+",0,"NA","promoter-TSS (NM_177647)","promoter-TSS (NM_177647)",50,"NR_103465",50497,"Mm.89341","NM_015765","ENSMUSG00000051396","Hspa14","70kDa|HSP70L1|Hsp70-4|NST-1|hsr.1","heat shock protein 14","protein-coding"]
[418,"chr11",49846300,49846925,"+",0,"NA","promoter-TSS (NM_207692)","promoter-TSS (NM_207692)",-139,"NM_001163671",26420,"Mm.68933","NM_016961","ENSMUSG00000020366","Mapk9","AI851083|JNK2|Prkm9|p54aSAPK","mitogen-activated protein kinase 9","protein-coding"]
[2324,"chr4",116507298,116508042,"+",0,"NA","intron (NM_008389, intron 1 of 8)","CpG",121,"NM_008389",16351,"Mm.1350","NM_008389","ENSMUSG00000028696","Ipp","D4Jhu8|Mipp","IAP promoted placental gene","protein-coding"]
[933,"chr13",81710789,81712130,"+",0,"NA","promoter-TSS (NM_001081176)","promoter-TSS (NM_001081176)",42,"NM_028372",72852,"Mm.31095","NM_028372","ENSMUSG00000051098","Mblac2","2900024O10Rik","metallo-beta-lactamase domain containing 2","protein-coding"]
[783,"chr12",84417084,84417765,"+",0,"NA","exon (NM_025525, exon 1 of 1)","exon (NM_025525, exon 1 of 1)",224,"NM_025525",66381,"Mm.24846","NM_025525","ENSMUSG00000098134","Rnf113a2","2310020H19Rik|AI426758|Rnf113a","ring finger protein 113A2","protein-coding"]
[2217,"chr3",146450217,146450718,"+",0,"NA","promoter-TSS (NM_028836)","promoter-TSS (NM_028836)",0,"NM_028836",74245,"Mm.45396","NM_028836","ENSMUSG00000028189","Ctbs","2210401K11Rik|CTB","chitobiase, di-N-acetyl-","protein-coding"]
[1357,"chr17",10319746,10320372,"+",0,"NA","promoter-TSS (NM_021881)","promoter-TSS (NM_021881)",140,"NR_037588",100526796,"Mm.384135","NR_037588",null,"Cahm","B930003M22Rik","colon adenocarcinoma hypermethylated RNA","ncRNA"]
[2333,"chr4",123104483,123105621,"+",0,"NA","promoter-TSS (NM_007559)","promoter-TSS (NM_007559)",-109,"NM_007559",12164,"Mm.439764","NM_007559","ENSMUSG00000002384","Bmp8b","Op3","bone morphogenetic protein 8b","protein-coding"]
[348,"chr10",116949768,116950664,"+",0,"NA","promoter-TSS (NR_038026)","promoter-TSS (NR_038026)",164,"NM_001003950",216363,"Mm.336394","NM_001003950","ENSMUSG00000064181","Rab3ip","B230311A06|Gtpat12|Rabin3","RAB3A interacting protein","protein-coding"]
[1152,"chr15",78850461,78851373,"+",0,"NA","TTS (NM_027219)","TTS (NM_027219)",4612,"NM_025622",107753,"Mm.390793","NM_025622","ENSMUSG00000043501","Lgals2","2200008F12Rik|AI324147","lectin, galactose-binding, soluble 2","protein-coding"]
[789,"chr12",85473717,85474527,"+",0,"NA","exon (NM_010234, exon 1 of 4)","exon (NM_010234, exon 1 of 4)",221,"NM_010234",14281,"Mm.246513","NM_010234","ENSMUSG00000021250","Fos","D12Rfj1|c-fos|cFos","FBJ osteosarcoma oncogene","protein-coding"]
[49,"chr1",63273197,63273892,"+",0,"NA","intron (NM_001267872, intron 1 of 5)","CpG",275,"NM_001267872",73884,"Mm.86986","NM_028673","ENSMUSG00000027520","Zdbf2","4930431J08Rik|9330107J05Rik","zinc finger, DBF-type containing 2","protein-coding"]
[2046,"chr2",165594841,165595770,"+",0,"NA","intron (NM_001271963, intron 1 of 15)","CpG",277,"NM_001271963",14049,"Mm.282719","NM_010165","ENSMUSG00000017897","Eya2","Eab1","eyes absent 2 homolog (Drosophila)","protein-coding"]
[2052,"chr2",167492002,167493430,"+",0,"NA","promoter-TSS (NM_030743)","promoter-TSS (NM_030743)",71,"NM_030743",81018,"Mm.22225","NM_030743","ENSMUSG00000006418","Rnf114","1110008J21Rik|AI225886|AW549494|Zfp228|Zfp313|Znf228","ring finger protein 114","protein-coding"]
[2967,"chr7",80232133,80232983,"+",0,"NA","promoter-TSS (NM_178752)","promoter-TSS (NM_178752)",247,"NM_001291276",23991,"Mm.30217","NM_011870","ENSMUSG00000030538","Cib1","Cibkip|Kip|Prkdcip","calcium and integrin binding 1 (calmyrin)","protein-coding"]
[2868,"chr7",3665177,3665784,"+",0,"NA","TTS (NM_181820)","TTS (NM_181820)",360,"NM_027203",69757,"Mm.389782","NM_027203","ENSMUSG00000078813","Leng1","1500001K17Rik","leukocyte receptor cluster (LRC) member 1","protein-coding"]
[993,"chr14",30825478,30826137,"+",0,"NA","exon (NM_028839, exon 1 of 8)","exon (NM_028839, exon 1 of 8)",213,"NM_028839",69179,"Mm.143025","NM_028839","ENSMUSG00000006526","Tmem110","1810038N08Rik|2310014H19Rik|AW554125","transmembrane protein 110","protein-coding"]
[627,"chr11",102665099,102666336,"+",0,"NA","5' UTR (NM_001127576, exon 1 of 8)","5' UTR (NM_001127576, exon 1 of 8)",132,"NM_001127576",268491,"Mm.447643","NM_001127576","ENSMUSG00000051455","Meioc","Gm1564|Gm663","meiosis specific with coiled-coil domain","protein-coding"]
[1090,"chr15",12824251,12825065,"+",0,"NA","promoter-TSS (NM_001130149)","promoter-TSS (NM_001130149)",-1,"NM_001166360",77877,"Mm.207311","NM_029998","ENSMUSG00000022195","6030458C11Rik","-","RIKEN cDNA 6030458C11 gene","protein-coding"]
[1308,"chr16",33829184,33829758,"+",0,"NA","promoter-TSS (NM_010580)","promoter-TSS (NM_010580)",-194,"NM_010580",16419,"Mm.6424","NM_010580","ENSMUSG00000022817","Itgb5","AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5","integrin beta 5","protein-coding"]
[2117,"chr3",60501169,60501840,"+",0,"NA","intron (NM_001253709, intron 1 of 8)","CpG",325,"NM_001253708",56758,"Mm.255723","NM_020007","ENSMUSG00000027763","Mbnl1","Mbnl|mKIAA0428","muscleblind-like 1 (Drosophila)","protein-coding"]
[715,"chr12",3426821,3427751,"+",0,"NA","promoter-TSS (NR_030694)","promoter-TSS (NR_030694)",429,"NM_172421",75302,"Mm.120475","NM_172421","ENSMUSG00000037486","Asxl2","4930556B16Rik|mKIAA1685","additional sex combs like 2 (Drosophila)","protein-coding"]
[1934,"chr2",110017568,110018337,"+",0,"NA","exon (NM_026613, exon 1 of 6)","exon (NM_026613, exon 1 of 6)",135,"NM_026613",68201,"Mm.181767","NM_026613","ENSMUSG00000027160","Ccdc34","2810027O19Rik|4930522P10Rik|AI596202","coiled-coil domain containing 34","protein-coding"]
[2503,"chr5",32135798,32136875,"+",0,"NA","promoter-TSS (NM_008037)","promoter-TSS (NM_008037)",-136,"NM_008037",14284,"Mm.24684","NM_008037","ENSMUSG00000029135","Fosl2","Fra-2","fos-like antigen 2","protein-coding"]
[2201,"chr3",136669357,136670106,"+",0,"NA","promoter-TSS (NM_008913)","promoter-TSS (NM_008913)",-335,"NM_008913",19055,"Mm.331389","NM_008913","ENSMUSG00000028161","Ppp3ca","2900074D19Rik|CN|Caln|Calna|CnA","protein phosphatase 3, catalytic subunit, alpha isoform","protein-coding"]
[1916,"chr2",90846940,90847709,"+",0,"NA","exon (NM_019758, exon 1 of 13)","exon (NM_019758, exon 1 of 13)",169,"NM_019758",56428,"Mm.28023","NM_019758","ENSMUSG00000027282","Mtch2","2310034D24Rik|4930539J07Rik|HSPC032","mitochondrial carrier homolog 2 (C. elegans)","protein-coding"]
[23,"chr1",39900122,39901774,"+",0,"NA","promoter-TSS (NM_008696)","promoter-TSS (NM_008696)",35,"NM_008696",26921,"Mm.491139","NM_008696","ENSMUSG00000026074","Map4k4","9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik","mitogen-activated protein kinase kinase kinase kinase 4","protein-coding"]
[1722,"chr19",37206936,37208151,"+",0,"NA","promoter-TSS (NM_027314)","promoter-TSS (NM_027314)",-2,"NM_027314",69104,"Mm.175989","NM_027314","ENSMUSG00000023307","2005-03-01","1810015H18Rik|2310008I22Rik|2700055A20Rik|5730499H23Rik|E130202O05Rik|MARCH-V|MITOL|Marchv|Rnf153","membrane-associated ring finger (C3HC4) 5","protein-coding"]
[388,"chr11",11685501,11686304,"+",0,"NA","promoter-TSS (NM_001301868)","promoter-TSS (NM_001301868)",-23,"NM_009578",22778,"Mm.103545","NM_009578","ENSMUSG00000018654","Ikzf1","5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227","IKAROS family zinc finger 1","protein-coding"]
[364,"chr10",127739241,127740158,"+",0,"NA","intron (NM_198035, intron 1 of 1)","CpG",161,"NM_198035",320080,"Mm.27258","NM_198035","ENSMUSG00000044617","Zbtb39","7030401O21Rik|mKIAA0352","zinc finger and BTB domain containing 39","protein-coding"]
[3069,"chr7",139247779,139248977,"+",0,"NA","promoter-TSS (NM_001098636)","promoter-TSS (NM_001098636)",-104,"NM_001033206",101631,"Mm.334300","NM_001033206","ENSMUSG00000060260","Pwwp2b","AI594893|D7Ertd517e|D930023J19Rik|Pwwp2","PWWP domain containing 2B","protein-coding"]
[1425,"chr17",29318876,29319526,"+",0,"NA","5' UTR (NM_023734, exon 1 of 7)","5' UTR (NM_023734, exon 1 of 7)",319,"NM_023734",74116,"Mm.30950","NM_023734","ENSMUSG00000024011","Pi16","1200009H11Rik|Cripi|PI-16","peptidase inhibitor 16","protein-coding"]
[950,"chr13",108214119,108215093,"+",0,"NA","intron (NM_029001, intron 1 of 7)","CpG",202,"NM_029001",74559,"Mm.286127","NM_029001","ENSMUSG00000021696","Elovl7","9130013K24Rik|AI840082","ELOVL family member 7, elongation of long chain fatty acids (yeast)","protein-coding"]
[2680,"chr5",137787686,137788562,"+",0,"NA","intron (NM_001005426, intron 1 of 16)","CpG",322,"NM_001005426",381678,"Mm.332765","NM_001005426","ENSMUSG00000037108","Zcwpw1","Gm1053","zinc finger, CW type with PWWP domain 1","protein-coding"]
[2957,"chr7",73375478,73376087,"+",0,"NA","promoter-TSS (NR_040325)","promoter-TSS (NR_040325)",-8,"NR_040324",319783,"Mm.349813","NR_040324","ENSMUSG00000097756","A730056A06Rik","C76391","RIKEN cDNA A730056A06 gene","ncRNA"]
[1445,"chr17",34850036,34850939,"+",0,"NA","promoter-TSS (NM_138580)","promoter-TSS (NM_138580)",96,"NM_001045864",27632,"Mm.653","NM_138580","ENSMUSG00000024369","Nelfe","D17H6S45|NELF-E|RD|Rdbp","negative elongation factor complex member E, Rdbp","protein-coding"]
[1678,"chr19",8756692,8757542,"+",0,"NA","promoter-TSS (NM_016813)","promoter-TSS (NM_016813)",0,"NM_001276704",53319,"Mm.7271","NM_016813","ENSMUSG00000010097","Nxf1","Mex67|Mvb1|Tap","nuclear RNA export factor 1","protein-coding"]
[1845,"chr2",31611600,31612603,"+",0,"NA","promoter-TSS (NR_105964)","promoter-TSS (NR_105964)",-320,"NR_105964",102466214,null,"NR_105964","ENSMUSG00000098904","Mir6998","Gm28024|mmu-mir-6998","microRNA 6998","ncRNA"]
[1025,"chr14",54710147,54711009,"+",0,"NA","exon (NM_207131, exon 2 of 2)","exon (NM_207131, exon 2 of 2)",1596,"NM_207131",110794,"Mm.236223","NM_207131","ENSMUSG00000052435","Cebpe","C/EBPe|CRP1|Gm294","CCAAT/enhancer binding protein (C/EBP), epsilon","protein-coding"]
[3429,"chr9",87015279,87016134,"+",0,"NA","intron (NM_001037907, intron 1 of 3)","CpG",169,"NM_001037907",382089,"Mm.92244","NM_001037907","ENSMUSG00000047897","Ripply2","C030002E08Rik|Gm1122","ripply2 homolog (zebrafish)","protein-coding"]
[3083,"chr7",141268815,141269668,"+",0,"NA","exon (NM_028069, exon 14 of 14)","exon (NM_028069, exon 14 of 14)",-2817,"NM_001252600",54123,"Mm.3233","NM_016850","ENSMUSG00000025498","Irf7","-","interferon regulatory factor 7","protein-coding"]
[3073,"chr7",140125404,140126000,"+",0,"NA","promoter-TSS (NM_153783)","promoter-TSS (NM_153783)",17,"NM_153783",212503,"Mm.486735","NM_153783","ENSMUSG00000025464","Paox","2410012F02Rik|AI118225|Pao","polyamine oxidase (exo-N4-amino)","protein-coding"]
[1992,"chr2",147183941,147184557,"+",0,"NA","exon (NM_010919, exon 2 of 2)","exon (NM_010919, exon 2 of 2)",166,"NR_030769",100313531,"Mm.405189","NR_030769","ENSMUSG00000086509","Nkx2-2os","Gm14112|Nkx2-2as|Nkx2.2AS|OTTMUSG00000015691","NK2 homeobox 2, opposite strand","ncRNA"]
[2478,"chr5",24451949,24453046,"+",0,"NA","exon (NM_139153, exon 1 of 18)","exon (NM_139153, exon 1 of 18)",320,"NM_139153",213990,"Mm.250703","NM_139153","ENSMUSG00000023353","Agap3","AGAP-3|AV028425|Centg3|Crag|Crag.|MRIP-1|cnt-g3","ArfGAP with GTPase domain, ankyrin repeat and PH domain 3","protein-coding"]
[1842,"chr2",31245660,31247108,"+",0,"NA","intron (NM_019681, intron 1 of 7)","CpG",461,"NM_019681",14299,"Mm.249318","NM_019681","ENSMUSG00000062661","Ncs1","9430075O15Rik|A730032G13Rik|AI836659|Freq|Mfreq|NCS-1","neuronal calcium sensor 1","protein-coding"]
[1466,"chr17",45432898,45434359,"+",0,"NA","promoter-TSS (NR_130961)","promoter-TSS (NR_130961)",79,"NM_152810",71702,"Mm.28270","NM_152810","ENSMUSG00000023932","Cdc5l","1200002I02Rik|AA408004|PCDC5RP","cell division cycle 5-like (S. pombe)","protein-coding"]
[485,"chr11",69340098,69341099,"+",0,"NA","promoter-TSS (NR_027827)","promoter-TSS (NR_027827)",-171,"NR_027827",80515,"Mm.5324","NM_020591","ENSMUSG00000043419","Chd3os","2310043C11Rik|A030009H04Rik|AA589459|AB041807|MNCb-2875|RNF21","chromodomain helicase DNA binding protein 3, opposite strand","ncRNA"]
[2340,"chr4",124986153,124987299,"+",0,"NA","intron (NM_138683, intron 1 of 5)","CpG",296,"NM_138683",192199,"Mm.42202","NM_138683","ENSMUSG00000028871","Rspo1","R-spondin|Rspondin","R-spondin 1","protein-coding"]
[2143,"chr3",88685437,88686624,"+",0,"NA","intron (NM_028814, intron 1 of 13)","CpG",236,"NM_028814",74200,"Mm.251800","NM_028814","ENSMUSG00000028060","2810403A07Rik","A430106P18Rik|AI256352|AI451678|Blom7|Kiaa0907","RIKEN cDNA 2810403A07 gene","protein-coding"]
[778,"chr12",83763288,83763860,"+",0,"NA","promoter-TSS (NM_001205343)","promoter-TSS (NM_001205343)",-60,"NM_001205343",170721,"Mm.133443","NM_130887","ENSMUSG00000021223","Papln","E030033C16Rik","papilin, proteoglycan-like sulfated glycoprotein","protein-coding"]
[3316,"chr9",7764039,7764619,"+",0,"NA","intron (NM_133739, intron 1 of 4)","CpG",252,"NM_133739",71929,"Mm.283293","NM_133739","ENSMUSG00000050912","Tmem123","2310075C12Rik","transmembrane protein 123","protein-coding"]
[720,"chr12",4768863,4769479,"+",0,"NA","promoter-TSS (NM_175431)","promoter-TSS (NM_175431)",96,"NM_175431",207921,"Mm.184898","NM_175431","ENSMUSG00000050545","Fam228b","A830093I24Rik","family with sequence similarity 228, member B","protein-coding"]
[1270,"chr16",17759486,17760414,"+",0,"NA","intron (NM_145479, intron 1 of 6)","CpG",329,"NM_145479",224023,"Mm.282807","NM_145479","ENSMUSG00000022750","Klhl22","2610318I18Rik|Kelchl","kelch-like 22","protein-coding"]
[2449,"chr4",155085985,155086815,"+",0,"NA","promoter-TSS (NM_001081100)","promoter-TSS (NM_001081100)",-103,"NM_026395",67830,"Mm.241604","NM_026395","ENSMUSG00000029048","Rer1","1110060F11Rik|5830454N22Rik|AU043380","RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)","protein-coding"]
[460,"chr11",60537468,60539350,"+",0,"NA","5' UTR (NM_172943, exon 1 of 4)","5' UTR (NM_172943, exon 1 of 4)",726,"NM_172943",268420,"Mm.262056","NM_172943","ENSMUSG00000042650","Alkbh5","AW050020|AW215868|Abh5|E130207K11|Ofoxd","alkB, alkylation repair homolog 5 (E. coli)","protein-coding"]
[1645,"chr19",5567066,5570941,"+",0,"NA","exon (NM_001033448, exon 2 of 2)","exon (NM_001033448, exon 2 of 2)",929,"NM_001033448",381201,"Mm.441906","NM_001033448","ENSMUSG00000049562","Ap5b1","Gm962","adaptor-related protein complex 5, beta 1 subunit","protein-coding"]
[3508,"chr9",122950594,122951463,"+",0,"NA","promoter-TSS (NM_025419)","promoter-TSS (NM_025419)",-28,"NM_025419",66202,"Mm.268307","NM_025419","ENSMUSG00000032551","1110059G10Rik","-","RIKEN cDNA 1110059G10 gene","protein-coding"]
[324,"chr10",89744825,89745804,"+",0,"NA","intron (NM_029166, intron 1 of 20)","CpG",323,"NM_029166",75089,"Mm.268922","NM_029166","ENSMUSG00000019951","Uhrf1bp1l","2010319N22Rik|4930506D01Rik|AA589495|C80672|E030041M21Rik|mKIAA0701","UHRF1 (ICBP90) binding protein 1-like","protein-coding"]
[1389,"chr17",25015169,25016145,"+",0,"NA","promoter-TSS (NM_020608)","promoter-TSS (NM_020608)",-427,"NM_020608",57354,"Mm.328854","NM_020608","ENSMUSG00000038002","Cramp1l","5830477H08Rik|AI256853|AI790734|Tce4|mKIAA1426","Crm, cramped-like (Drosophila)","protein-coding"]
[244,"chr10",67537335,67537891,"+",0,"NA","promoter-TSS (NM_010118)","promoter-TSS (NM_010118)",-256,"NM_010118",13654,"Mm.290421","NM_010118","ENSMUSG00000037868","Egr2","Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6","early growth response 2","protein-coding"]
[637,"chr11",104132425,104133267,"+",0,"NA","promoter-TSS (NM_007762)","promoter-TSS (NM_007762)",65,"NM_001313929",12921,"Mm.1892","NM_007762","ENSMUSG00000018634","Crhr1","CRFR1|Crhr","corticotropin releasing hormone receptor 1","protein-coding"]
[2066,"chr2",174415569,174416240,"+",0,"NA","promoter-TSS (NM_020580)","promoter-TSS (NM_020580)",100,"NM_020580",57314,"Mm.271709","NM_020580","ENSMUSG00000016253","Nelfcd","2410003I03Rik|C77797|Th1|Th1l","negative elongation factor complex member C/D, Th1l","protein-coding"]
[3220,"chr8",94601057,94602674,"+",0,"NA","promoter-TSS (NM_026274)","promoter-TSS (NM_026274)",-76,"NM_026274",67610,"Mm.109074","NM_026274","ENSMUSG00000050079","Rspry1","4930470D19Rik|AI608258","ring finger and SPRY domain containing 1","protein-coding"]
[2811,"chr6",95117563,95118498,"+",0,"NA","intron (NM_001102670, intron 1 of 2)","CpG",150,"NM_001008785",243574,"Mm.333275","NM_001008785","ENSMUSG00000030031","Kbtbd8","AU040152|SSEC-51|SSEC51|Takrp|mKIAA1842","kelch repeat and BTB (POZ) domain containing 8","protein-coding"]
[2679,"chr5",137778767,137780089,"+",0,"NA","exon (NM_027242, exon 2 of 4)","exon (NM_027242, exon 2 of 4)",510,"NM_027242",69871,"Mm.276058","NM_027242","ENSMUSG00000029725","Ppp1r35","2010007H12Rik|2010011D20Rik|AL024004","protein phosphatase 1, regulatory subunit 35","protein-coding"]
[752,"chr12",69296519,69297420,"+",0,"NA","5' UTR (NM_027117, exon 1 of 13)","5' UTR (NM_027117, exon 1 of 13)",288,"NM_027117",69554,"Mm.234368","NM_027117","ENSMUSG00000020978","Klhdc2","2310022K15Rik|D12Ertd522e|HCLP-1|LCP","kelch domain containing 2","protein-coding"]
[1232,"chr15",102936744,102937580,"+",0,"NA","exon (NM_010463, exon 1 of 2)","exon (NM_010463, exon 1 of 2)",309,"NM_010463",15421,"Mm.221179","NM_010463","ENSMUSG00000050328","Hoxc12","Hox-3.8","homeobox C12","protein-coding"]
[2899,"chr7",28179292,28180055,"+",0,"NA","promoter-TSS (NM_001271370)","promoter-TSS (NM_001271370)",190,"NM_010092",13549,"Mm.57249","NM_010092","ENSMUSG00000002409","Dyrk1b","Mirk","dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b","protein-coding"]
[3045,"chr7",127511782,127512934,"+",0,"NA","non-coding (NR_024331, exon 1 of 1)","non-coding (NR_024331, exon 1 of 1)",375,"NM_001304266",100043597,"Mm.428042","NM_175144","ENSMUSG00000053877","Srcap","B930091H02Rik|D030022P06Rik|F630004O05Rik","Snf2-related CREBBP activator protein","protein-coding"]
[2941,"chr7",49245774,49247288,"+",0,"NA","5' UTR (NM_175272, exon 1 of 38)","5' UTR (NM_175272, exon 1 of 38)",342,"NM_175272",78286,"Mm.333881","NM_175272","ENSMUSG00000052512","Nav2","5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015","neuron navigator 2","protein-coding"]
[379,"chr11",4637480,4638073,"+",0,"NA","promoter-TSS (NM_029291)","promoter-TSS (NM_029291)",-17,"NM_029291",75452,"Mm.439906","NM_029291","ENSMUSG00000020412","Ascc2","1700011I11Rik|2610034L15Rik|AI482016|ASC1p100|AW046480","activating signal cointegrator 1 complex subunit 2","protein-coding"]
[1607,"chr18",74778978,74779725,"+",0,"NA","promoter-TSS (NR_028560)","promoter-TSS (NR_028560)",139,"NM_177470",52538,"Mm.245724","NM_177470","ENSMUSG00000036880","Acaa2","0610011L04Rik|AI255831|AI265397|D18Ertd240e","acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)","protein-coding"]
[1386,"chr17",24878440,24879403,"+",0,"NA","intron (NM_008340, intron 1 of 1)","intron (NM_008340, intron 1 of 1)",151,"NM_008340",16005,"Mm.3135","NM_008340","ENSMUSG00000046070","Igfals","ALS|Albs|mKIAA4111","insulin-like growth factor binding protein, acid labile subunit","protein-coding"]
[3404,"chr9",66059909,66060663,"+",0,"NA","exon (NM_011149, exon 1 of 5)","exon (NM_011149, exon 1 of 5)",117,"NM_011149",19035,"Mm.335249","NM_011149","ENSMUSG00000032383","Ppib","AA408962|AA553318|AI844835|Cphn-2|Cphn2|CyP-20b","peptidylprolyl isomerase B","protein-coding"]
[1536,"chr18",12741014,12741589,"+",0,"NA","promoter-TSS (NM_027687)","promoter-TSS (NM_027687)",-54,"NM_001042419",71132,"Mm.179740","NM_027687","ENSMUSG00000024430","Cabyr","1700016C01Rik|4933421A18Rik|CBP86|FSP-2","calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)","protein-coding"]
[1639,"chr19",5041086,5041761,"+",0,"NA","promoter-TSS (NM_134155)","promoter-TSS (NM_134155)",19,"NM_134155",107392,"Mm.29628","NM_134155","ENSMUSG00000080268","Brms1","AV003220|AW554636","breast cancer metastasis-suppressor 1","protein-coding"]
[1035,"chr14",60378100,60379348,"+",0,"NA","exon (NM_001164705, exon 1 of 2)","exon (NM_001164705, exon 1 of 2)",438,"NM_001164705",72125,"Mm.275499","NM_028113","ENSMUSG00000021986","Amer2","2600011E07Rik|Fam123a","APC membrane recruitment 2","protein-coding"]
[3367,"chr9",49340542,49341014,"+",0,"NA","intron (NM_010077, intron 1 of 7)","CpG",116,"NM_010077",13489,"Mm.41970","NM_010077","ENSMUSG00000032259","Drd2","D2R|Drd-2","dopamine receptor D2","protein-coding"]
[2617,"chr5",119670055,119671062,"+",0,"NA","promoter-TSS (NM_198052)","promoter-TSS (NM_198052)",-304,"NM_198052",21386,"Mm.219139","NM_011535","ENSMUSG00000018604","Tbx3","D5Ertd189e","T-box 3","protein-coding"]
[452,"chr11",59306048,59307369,"+",0,"NA","promoter-TSS (NM_139298)","promoter-TSS (NM_139298)",-222,"NM_139298",216795,"Mm.218794","NM_139298","ENSMUSG00000000126","Wnt9a","Wnt14","wingless-type MMTV integration site family, member 9A","protein-coding"]
[579,"chr11",90249072,90250040,"+",0,"NA","promoter-TSS (NM_026178)","promoter-TSS (NM_026178)",80,"NM_026178",67468,"Mm.277518","NM_026178","ENSMUSG00000003948","Mmd","1200017E07Rik|1810073C06Rik|AA690185","monocyte to macrophage differentiation-associated","protein-coding"]
[295,"chr10",80629133,80630112,"+",0,"NA","promoter-TSS (NM_001159591)","promoter-TSS (NM_001159591)",-34,"NM_001159591",103236,"Mm.29873","NM_134002","ENSMUSG00000003345","Csnk1g2","2810429I12Rik|AI463719","casein kinase 1, gamma 2","protein-coding"]
[1894,"chr2",71389068,71389696,"+",0,"NA","intron (NM_026115, intron 1 of 10)","CpG",122,"NM_026115",107435,"Mm.272472","NM_026115","ENSMUSG00000027018","Hat1","2410071B14Rik|AA536933|Hat-1|KAT1","histone aminotransferase 1","protein-coding"]
[535,"chr11",78037722,78038502,"+",0,"NA","TTS (NM_183286)","TTS (NM_183286)",171,"NM_008028",14252,"Mm.130227","NM_008028","ENSMUSG00000061981","Flot2","AI573412|Esa|reggie-2","flotillin 2","protein-coding"]
[1618,"chr18",82474754,82476126,"+",0,"NA","intron (NM_010777, intron 1 of 6)","CpG",317,"NM_001025245",17196,"Mm.252063","NM_010777","ENSMUSG00000041607","Mbp","C76307|Hmbpr|R75289|golli-mbp|mld|shi","myelin basic protein","protein-coding"]
[3301,"chr8",123373396,123374508,"+",0,"NA","exon (NM_001286362, exon 1 of 17)","exon (NM_001286362, exon 1 of 17)",241,"NM_001286363",66855,"Mm.178818","NM_025804","ENSMUSG00000001472","Tcf25","1100001J13Rik|1810041K11Rik|D8Ertd325e|Nulp1|mKIAA1049","transcription factor 25 (basic helix-loop-helix)","protein-coding"]
[3138,"chr8",36094597,36095284,"+",0,"NA","5' UTR (NM_172911, exon 1 of 6)","5' UTR (NM_172911, exon 1 of 6)",112,"NM_172911",244418,"Mm.244971","NM_172911","ENSMUSG00000050271","D8Ertd82e","9830148H23|NACK|Sgk223|mFLJ00269","DNA segment, Chr 8, ERATO Doi 82, expressed","protein-coding"]
[3136,"chr8",33731627,33732471,"+",0,"NA","promoter-TSS (NM_001167922)","promoter-TSS (NM_001167922)",-18,"NM_026584",68153,"Mm.286104","NM_026584","ENSMUSG00000031585","Gtf2e2","34kDa|AI462509|C330006J08Rik","general transcription factor II E, polypeptide 2 (beta subunit)","protein-coding"]
[77,"chr1",87853254,87853899,"+",0,"NA","intron (NM_177646, intron 1 of 29)","CpG",289,"NM_177646",227333,"Mm.277217","NM_177646","ENSMUSG00000070738","Dgkd","AI841987|D330025K09|DGKdelta|dgkd-2","diacylglycerol kinase, delta","protein-coding"]
[683,"chr11",117986363,117987356,"+",0,"NA","promoter-TSS (NM_133757)","promoter-TSS (NM_133757)",2,"NM_133757",74451,"Mm.28864","NM_133757","ENSMUSG00000017715","Pgs1","2610019F11Rik|4933424M23Rik|SAF","phosphatidylglycerophosphate synthase 1","protein-coding"]
[2260,"chr4",43875014,43876190,"+",0,"NA","promoter-TSS (NM_016678)","promoter-TSS (NM_016678)",72,"NM_016678",53614,"Mm.331573","NM_016678","ENSMUSG00000028476","Reck","St15|mRECK","reversion-inducing-cysteine-rich protein with kazal motifs","protein-coding"]
[541,"chr11",78261365,78262070,"+",0,"NA","promoter-TSS (NM_001002004)","promoter-TSS (NM_001002004)",-37,"NM_001002004",72503,"Mm.237103","NM_001002004","ENSMUSG00000010277","2610507B11Rik","AU022687|D11Bhm178e|D11Bhm179e|E1|Kiaa0100|mKIAA0100","RIKEN cDNA 2610507B11 gene","protein-coding"]
[1215,"chr15",99601032,99601924,"+",0,"NA","promoter-TSS (NM_175087)","promoter-TSS (NM_175087)",78,"NM_175087",11831,"Mm.202309","NM_175087","ENSMUSG00000043144","Aqp6","AI790337","aquaporin 6","protein-coding"]
[2995,"chr7",100009665,100010264,"+",0,"NA","promoter-TSS (NM_001291320)","promoter-TSS (NM_001291320)",46,"NM_001291320",69121,"Mm.285295","NM_133709","ENSMUSG00000030732","Chrdl2","1810022C01Rik|Chl2","chordin-like 2","protein-coding"]
[1712,"chr19",27216635,27217336,"+",0,"NA","promoter-TSS (NM_001161420)","promoter-TSS (NM_001161420)",-35,"NM_013703",22359,"Mm.4141","NM_013703","ENSMUSG00000024924","Vldlr","AA408956|AI451093|AW047288","very low density lipoprotein receptor","protein-coding"]
[2344,"chr4",125490421,125492042,"+",0,"NA","intron (NM_001081097, intron 1 of 15)","CpG",400,"NM_001081097",14807,"Mm.40896","NM_001081097","ENSMUSG00000001985","Grik3","9630027E11|GluK3|GluR7-3|Glur-7|Glur7","glutamate receptor, ionotropic, kainate 3","protein-coding"]
[765,"chr12",76404137,76404986,"+",0,"NA","exon (NM_001002012, exon 2 of 2)","exon (NM_001002012, exon 2 of 2)",191,"NM_008301",15512,"Mm.296181","NM_008301","ENSMUSG00000059970","Hspa2","70kDa|HSP70.2|HSP70A2|Hsp70-2","heat shock protein 2","protein-coding"]
[2552,"chr5",86803976,86804835,"+",0,"NA","promoter-TSS (NM_177680)","promoter-TSS (NM_177680)",-85,"NM_177680",231386,"Mm.196325","NM_177680","ENSMUSG00000035851","Ythdc1","A730098D12Rik|C80342|mKIAA1966","YTH domain containing 1","protein-coding"]
[2521,"chr5",38038999,38039547,"+",0,"NA","promoter-TSS (NM_026959)","promoter-TSS (NM_026959)",43,"NM_026959",71116,"Mm.18959","NM_026959","ENSMUSG00000029125","Stx18","1810035L21Rik|4933425D03Rik|AU041562","syntaxin 18","protein-coding"]
[897,"chr13",54191959,54192898,"+",0,"NA","intron (NM_001010973, intron 1 of 2)","intron (NM_001010973, intron 1 of 2)",299,"NM_008286",15466,"Mm.57243","NM_008286","ENSMUSG00000034987","Hrh2","-","histamine receptor H2","protein-coding"]
[312,"chr10",84576704,84577541,"+",0,"NA","intron (NM_146008, intron 1 of 9)","CpG",175,"NM_146008",216198,"Mm.296142","NM_146008","ENSMUSG00000020034","Tcp11l2","E430026E19Rik","t-complex 11 (mouse) like 2","protein-coding"]
[1628,"chr19",4096671,4097918,"+",0,"NA","promoter-TSS (NM_026373)","promoter-TSS (NM_026373)",-57,"NM_026373",52004,"Mm.29609","NM_026373","ENSMUSG00000024856","Cdk2ap2","5830466O21Rik|D19Ertd144e|Doc-1r","CDK2-associated protein 2","protein-coding"]
[3219,"chr8",94532585,94533317,"+",0,"NA","promoter-TSS (NM_153507)","promoter-TSS (NM_153507)",-77,"NM_153507",234577,"Mm.291815","NM_153507","ENSMUSG00000034361","Cpne2","3322401K10Rik","copine II","protein-coding"]
[2435,"chr4",152086857,152087432,"+",0,"NA","intron (NR_104381, intron 1 of 21)","CpG",281,"NR_104381",269608,"Mm.332102","NM_001004156","ENSMUSG00000039713","Plekhg5","BC023181|Syx","pleckstrin homology domain containing, family G (with RhoGef domain) member 5","protein-coding"]
[1002,"chr14",32599386,32600211,"+",0,"NA","promoter-TSS (NM_001001796)","promoter-TSS (NM_001001796)",-129,"NM_001001796",107751,"Mm.119274","NM_001001796","ENSMUSG00000041730","Prrxl1","Drg11|Drgx","paired related homeobox protein-like 1","protein-coding"]
[237,"chr10",61679986,61680650,"+",0,"NA","promoter-TSS (NR_126477)","promoter-TSS (NR_126477)",-3,"NM_009120",20224,"Mm.391794","NM_009120","ENSMUSG00000020088","Sar1a","1600019H17Rik|Sara|Sara1","SAR1 gene homolog A (S. cerevisiae)","protein-coding"]
[2584,"chr5",108660265,108660939,"+",0,"NA","exon (NM_199011, exon 1 of 23)","exon (NM_199011, exon 1 of 23)",167,"NM_199011",110524,"Mm.260921","NM_199011","ENSMUSG00000004815","Dgkq","110kDa|DAGK|DAGK7|Dagk4|Dgkd","diacylglycerol kinase, theta","protein-coding"]
[370,"chr10",128411085,128411854,"+",0,"NA","promoter-TSS (NM_026259)","promoter-TSS (NM_026259)",-147,"NR_104288",67588,"Mm.294120","NM_026259","ENSMUSG00000025373","Rnf41","2210404G21Rik|4930511A05Rik|4933415P08Rik|D10Ertd722e|FLRF|Nrdp1","ring finger protein 41","protein-coding"]
[2722,"chr5",150259571,150260298,"+",0,"NA","promoter-TSS (NM_172887)","promoter-TSS (NM_172887)",4,"NM_172887",320365,"Mm.216590","NM_172887","ENSMUSG00000056602","Fry","13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143","furry homolog (Drosophila)","protein-coding"]
[2371,"chr4",132274074,132274921,"+",0,"NA","intron (NM_025579, intron 1 of 5)","intron (NM_025579, intron 1 of 5)",122,"NM_025579",66464,"Mm.331926","NM_025579",null,"Taf12","20kDa|2810422D08Rik|AW557038|Taf2J","TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor","protein-coding"]
[2519,"chr5",36868102,36868931,"+",0,"NA","promoter-TSS (NM_172994)","promoter-TSS (NM_172994)",-54,"NM_172994",269643,"Mm.41694","NM_172994","ENSMUSG00000029120","Ppp2r2c","6330548O06Rik|IMYPNO|IMYPNO1|PR52","protein phosphatase 2, regulatory subunit B, gamma","protein-coding"]
[3398,"chr9",63602124,63603075,"+",0,"NA","promoter-TSS (NM_030068)","promoter-TSS (NM_030068)",-56,"NM_025857",66939,"Mm.34338","NM_025857","ENSMUSG00000037257","Aagab","2310007F21Rik|p34","alpha- and gamma-adaptin binding protein","protein-coding"]
[2923,"chr7",44857053,44857787,"+",0,"NA","promoter-TSS (NM_001290767)","promoter-TSS (NM_001290767)",17,"NM_001290767",59047,"Mm.238254","NM_021549","ENSMUSG00000002963","Pnkp","1810009G08Rik|PNK","polynucleotide kinase 3'- phosphatase","protein-coding"]
[2610,"chr5",115648339,115649737,"+",0,"NA","TTS (NM_001080808)","TTS (NM_001080808)",3465,"NR_105997",102465623,null,"NR_105997","ENSMUSG00000099254","Mir7030","Gm27267|mmu-mir-7030","microRNA 7030","ncRNA"]
[567,"chr11",85889813,85890541,"+",0,"NA","exon (NM_011536, exon 1 of 8)","exon (NM_011536, exon 1 of 8)",114,"NM_011536",21387,"Mm.275336","NM_011536","ENSMUSG00000000094","Tbx4","3930401C23","T-box 4","protein-coding"]
[416,"chr11",46436818,46437453,"+",0,"NA","5' UTR (NM_001104556, exon 1 of 2)","5' UTR (NM_001104556, exon 1 of 2)",174,"NM_025426",66213,"Mm.24159","NM_025426","ENSMUSG00000020397","Med7","1110063B05Rik|Crsp33|Crsp9","mediator complex subunit 7","protein-coding"]
[2950,"chr7",64287318,64288169,"+",0,"NA","promoter-TSS (NM_172742)","promoter-TSS (NM_172742)",73,"NM_172742",233315,"Mm.214959","NM_172742","ENSMUSG00000030522","Mtmr10","BB128963|C79734","myotubularin related protein 10","protein-coding"]
[3212,"chr8",90828411,90829318,"+",0,"NA","promoter-TSS (NM_177224)","promoter-TSS (NM_177224)",29,"NM_177224",109151,"Mm.100615","NM_177224","ENSMUSG00000056608","Chd9","1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308","chromodomain helicase DNA binding protein 9","protein-coding"]
[3115,"chr8",13104392,13106569,"+",0,"NA","promoter-TSS (NM_146207)","promoter-TSS (NM_146207)",-137,"NM_178708",234069,"Mm.103427","NM_178708","ENSMUSG00000038542","Pcid2","A730042J05Rik","PCI domain containing 2","protein-coding"]
[914,"chr13",60601784,60602679,"+",0,"NA","promoter-TSS (NM_134062)","promoter-TSS (NM_134062)",20,"NM_134062",69635,"Mm.24103","NM_029653","ENSMUSG00000021559","Dapk1","D13Ucla1|DAP-Kinase","death associated protein kinase 1","protein-coding"]
[380,"chr11",4946901,4948232,"+",0,"NA","promoter-TSS (NM_001243043)","promoter-TSS (NM_001243043)",45,"NM_001243043",11764,"Mm.274816","NM_007454","ENSMUSG00000009090","Ap1b1","Adtb1|b2b1660Clo","adaptor protein complex AP-1, beta 1 subunit","protein-coding"]
[100,"chr1",119525913,119527089,"+",0,"NA","5' UTR (NM_146103, exon 1 of 1)","5' UTR (NM_146103, exon 1 of 1)",347,"NM_146103",226351,"Mm.439806","NM_146103","ENSMUSG00000098923","Tmem185b","2500001K11Rik","transmembrane protein 185B","protein-coding"]
[3206,"chr8",85840374,85841252,"+",0,"NA","promoter-TSS (NM_199446)","promoter-TSS (NM_199446)",136,"NM_028007",71927,"Mm.61018","NM_028007","ENSMUSG00000031703","Itfg1","2310047C21Rik|AI314457|Cda08|D8Wsu49e","integrin alpha FG-GAP repeat containing 1","protein-coding"]
[965,"chr14",8213834,8214574,"+",0,"NA","promoter-TSS (NM_001305936)","promoter-TSS (NM_001305936)",123,"NM_027782",71393,"Mm.292712","NM_027782","ENSMUSG00000021752","Kctd6","5430433B02Rik|AU044285","potassium channel tetramerisation domain containing 6","protein-coding"]
[300,"chr10",80929617,80930513,"+",0,"NA","promoter-TSS (NM_008655)","promoter-TSS (NM_008655)",-26,"NM_008655",17873,"Mm.1360","NM_008655","ENSMUSG00000015312","Gadd45b","AI323528|Myd118","growth arrest and DNA-damage-inducible 45 beta","protein-coding"]
[1279,"chr16",18776441,18777914,"+",0,"NA","exon (NM_013805, exon 1 of 1)","exon (NM_013805, exon 1 of 1)",330,"NM_013805",12741,"Mm.22768","NM_013805","ENSMUSG00000041378","Cldn5","AI854493|MBEC1|Tmvcf","claudin 5","protein-coding"]
[1439,"chr17",34024220,34025486,"+",0,"NA","promoter-TSS (NM_009066)","promoter-TSS (NM_009066)",-159,"NR_106154",102466848,null,"NR_106154","ENSMUSG00000105964","Mir219c","mmu-mir-219c","microRNA 219c","ncRNA"]
[2974,"chr7",81571249,81571919,"+",0,"NA","exon (NM_001004185, exon 1 of 10)","exon (NM_001004185, exon 1 of 10)",292,"NM_001004185",434204,"Mm.181641","NM_001004185","ENSMUSG00000045795","Whamm","BB081391|Whdc1|mKIAA1971","WAS protein homolog associated with actin, golgi membranes and microtubules","protein-coding"]
[2079,"chr2",181187084,181188044,"+",0,"NA","5' UTR (NM_025598, exon 2 of 5)","5' UTR (NM_025598, exon 2 of 5)",221,"NM_025598",66496,"Mm.213943","NM_025598","ENSMUSG00000016344","Ppdpf","0610012G23Rik|2610317A05Rik|2700038C09Rik|3110053G12Rik","pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene","protein-coding"]
[286,"chr10",80179207,80180057,"+",0,"NA","5' UTR (NM_007909, exon 1 of 4)","5' UTR (NM_007909, exon 1 of 4)",150,"NM_007909",13637,"Mm.1478","NM_007909","ENSMUSG00000003070","Efna2","CEK7L|Elf1|Epl6|Eplg6|Lerk6","ephrin A2","protein-coding"]
[1395,"chr17",25569428,25571437,"+",0,"NA","promoter-TSS (NR_045176)","promoter-TSS (NR_045176)",254,"NM_011447",20681,"Mm.258220","NM_011447","ENSMUSG00000024176","Sox8","-","SRY (sex determining region Y)-box 8","protein-coding"]
[2405,"chr4",139310097,139311225,"+",0,"NA","promoter-TSS (NM_025337)","promoter-TSS (NM_025337)",39,"NM_145384",212555,"Mm.45131","NM_145384","ENSMUSG00000028744","Pqlc2","BC019216","PQ loop repeat containing 2","protein-coding"]
[1075,"chr14",118937316,118938327,"+",0,"NA","promoter-TSS (NM_008929)","promoter-TSS (NM_008929)",-111,"NM_008929",100037258,"Mm.12616","NM_008929","ENSMUSG00000022136","Dnajc3","AA408985|AU067833|Dnajc3a|Dnajc3b|Prkri|mp58|p58|p58IPK","DnaJ (Hsp40) homolog, subfamily C, member 3","protein-coding"]
[2426,"chr4",148959800,148960619,"+",0,"NA","TTS (NM_019781)","TTS (NM_019781)",139603,"NM_019781",56273,"Mm.184172","NM_019781","ENSMUSG00000028975","Pex14","Pex14p|R75137","peroxisomal biogenesis factor 14","protein-coding"]
[800,"chr12",100199091,100199745,"+",0,"NA","promoter-TSS (NM_009790)","promoter-TSS (NM_009790)",-17,"NM_009790",12313,"Mm.285993","NM_009790","ENSMUSG00000001175","Calm1","AI256814|AI327027|AI461935|AL024000|CaM|Calm","calmodulin 1","protein-coding"]
[2232,"chr4",12906719,12907297,"+",0,"NA","intron (NM_173746, intron 1 of 4)","CpG",171,"NM_001171801",208820,"Mm.12057","NM_173746",null,"Triqk","C130086A10|Gm11818|OTTMUSG00000004461","triple QxxK/R motif containing","protein-coding"]
[3125,"chr8",18845891,18847160,"+",0,"NA","5' UTR (NM_026792, exon 1 of 8)","5' UTR (NM_026792, exon 1 of 8)",246,"NM_026792",52123,"Mm.24117","NM_026792",null,"Agpat5","1110013A05Rik|D8Ertd319e","1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)","protein-coding"]
[1365,"chr17",21383535,21384101,"+",0,"NA","promoter-TSS (NM_172486)","promoter-TSS (NM_172486)",70,"NM_172486",210503,"Mm.33443","NM_172486","ENSMUSG00000062743","Zfp677","A830058L05Rik|Tce8","zinc finger protein 677","protein-coding"]
[2432,"chr4",152019285,152021009,"+",0,"NA","intron (NM_133879, intron 10 of 10)","intron (NM_133879, intron 10 of 10)",7524,"NM_133879",100090,"Mm.24661","NM_133879","ENSMUSG00000028952","Zbtb48","0610011D15Rik|AI327031|Hkr3","zinc finger and BTB domain containing 48","protein-coding"]
[1407,"chr17",27056904,27058038,"+",0,"NA","5' UTR (NM_080553, exon 1 of 58)","5' UTR (NM_080553, exon 1 of 58)",167,"NM_080553",16440,"Mm.458106","NM_080553","ENSMUSG00000042644","Itpr3","Ip3r3|Itpr-3","inositol 1,4,5-triphosphate receptor 3","protein-coding"]
[496,"chr11",70562632,70563321,"+",0,"NA","promoter-TSS (NM_001045959)","promoter-TSS (NM_001045959)",95,"NM_016713",50932,"Mm.42967","NM_016713","ENSMUSG00000020827","Mink1","B55|MINK|Map4k6|Ysk2","misshapen-like kinase 1 (zebrafish)","protein-coding"]
[2829,"chr6",115360746,115361453,"+",0,"NA","promoter-TSS (NM_001308352)","promoter-TSS (NM_001308352)",-45,"NM_001308352",19016,"Mm.3020","NM_011146","ENSMUSG00000000440","Pparg","Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2","peroxisome proliferator activated receptor gamma","protein-coding"]
[605,"chr11",98937472,98938406,"+",0,"NA","intron (NM_009024, intron 1 of 8)","CpG",221,"NM_001177302",19401,"Mm.439744","NM_009024","ENSMUSG00000037992","Rara","Nr1b1|RAR|RARalpha1","retinoic acid receptor, alpha","protein-coding"]
[2987,"chr7",98143030,98143893,"+",0,"NA","3' UTR (NM_011010, exon 1 of 1)","3' UTR (NM_011010, exon 1 of 1)",1986,"NM_011010",18378,"Mm.440368","NM_011010","ENSMUSG00000074006","Omp","-","olfactory marker protein","protein-coding"]
[1779,"chr2",11705156,11706003,"+",0,"NA","promoter-TSS (NM_008358)","promoter-TSS (NM_008358)",-133,"NM_008358",16169,"Mm.200196","NM_008358","ENSMUSG00000023206","Il15ra","AA690181|IL-15RA","interleukin 15 receptor, alpha chain","protein-coding"]
[2581,"chr5",108268667,108269394,"+",0,"NA","5' UTR (NM_026106, exon 1 of 3)","5' UTR (NM_026106, exon 1 of 3)",133,"NM_026106",13486,"Mm.303534","NM_026106","ENSMUSG00000029265","Dr1","1700121L09Rik|Dr1l|NC2|NC2beta","down-regulator of transcription 1","protein-coding"]
[1568,"chr18",37955283,37956070,"+",0,"NA","promoter-TSS (NM_010411)","promoter-TSS (NM_010411)",117,"NM_153793",225392,"Mm.233516","NM_153793","ENSMUSG00000044024","Rell2","4631403P03Rik|ependolin","RELT-like 2","protein-coding"]
[607,"chr11",98959754,98961208,"+",0,"NA","promoter-TSS (NM_001176528)","promoter-TSS (NM_001176528)",10,"NM_001176528",19401,"Mm.439744","NM_009024","ENSMUSG00000037992","Rara","Nr1b1|RAR|RARalpha1","retinoic acid receptor, alpha","protein-coding"]
[1807,"chr2",25877619,25878332,"+",0,"NA","exon (NM_175462, exon 1 of 32)","exon (NM_175462, exon 1 of 32)",192,"NM_001302351",227632,"Mm.119462","NM_175462","ENSMUSG00000058740","Kcnt1","C030030G16Rik|Slack|Slo2.2|slo2","potassium channel, subfamily T, member 1","protein-coding"]
[2902,"chr7",28305275,28306583,"+",0,"NA","exon (NM_025616, exon 11 of 11)","exon (NM_025616, exon 11 of 11)",-4144,"NM_007866",13389,"Mm.12896","NM_007866","ENSMUSG00000003436","Dll3","pu|pudgy","delta-like 3 (Drosophila)","protein-coding"]
[1699,"chr19",18712812,18713343,"+",0,"NA","promoter-TSS (NM_177640)","promoter-TSS (NM_177640)",-159,"NM_177640",225995,"Mm.28101","NM_177640","ENSMUSG00000047044","D030056L22Rik","-","RIKEN cDNA D030056L22 gene","protein-coding"]
[42,"chr1",59482081,59483159,"+",0,"NA","5' UTR (NM_008057, exon 1 of 1)","5' UTR (NM_008057, exon 1 of 1)",473,"NM_008057",14369,"Mm.297906","NM_008057","ENSMUSG00000041075","Fzd7","Fz7","frizzled homolog 7 (Drosophila)","protein-coding"]
[759,"chr12",73584217,73585678,"+",0,"NA","5' UTR (NM_008856, exon 1 of 14)","5' UTR (NM_008856, exon 1 of 14)",151,"NM_008856",18755,"Mm.341677","NM_008856","ENSMUSG00000021108","Prkch","Pkch","protein kinase C, eta","protein-coding"]
[3093,"chr7",142654268,142655094,"+",0,"NA","TTS (NR_030251)","TTS (NR_030251)",315,"NR_030251",723874,null,"NR_030251","ENSMUSG00000070140","Mir483","Mirn483|mir-483|mmu-mir-483","microRNA 483","ncRNA"]
[2508,"chr5",33983057,33984205,"+",0,"NA","5' UTR (NM_001310547, exon 1 of 4)","5' UTR (NM_001310547, exon 1 of 4)",198,"NM_001310546",381633,"Mm.4923","NM_001033458","ENSMUSG00000070858","Gm1673","-","predicted gene 1673","protein-coding"]
[1228,"chr15",102102553,102103355,"+",0,"NA","promoter-TSS (NM_153533)","promoter-TSS (NM_153533)",-34,"NM_153533",209039,"Mm.29389","NM_153533","ENSMUSG00000037003","Tns2","C1-ten|Tenc1|nep|nph","tensin 2","protein-coding"]
[235,"chr10",61089146,61089908,"+",0,"NA","intron (NM_025273, intron 1 of 3)","CpG",196,"NM_025273",13180,"Mm.39473","NM_025273","ENSMUSG00000020098","Pcbd1","Dcoh|Pcbd|Pcd|Phs","pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1","protein-coding"]
[1073,"chr14",115092044,115093046,"+",0,"NA","5' UTR (NM_175500, exon 1 of 8)","5' UTR (NM_175500, exon 1 of 8)",330,"NM_175500",103978,"Mm.320791","NM_175500","ENSMUSG00000022112","Gpc5","A230034F01Rik","glypican 5","protein-coding"]
[2291,"chr4",85205110,85206144,"+",0,"NA","intron (NM_019535, intron 1 of 8)","CpG",171,"NM_019535",20404,"Mm.143603","NM_019535","ENSMUSG00000028488","Sh3gl2","9530001L19Rik|AI120490|AW555077|B930049H17Rik|EEN-B1|SH3PA|Sh3d2a","SH3-domain GRB2-like 2","protein-coding"]
[2591,"chr5",112255450,112257213,"+",0,"NA","intron (NM_001312894, intron 1 of 5)","intron (NM_001312894, intron 1 of 5)",511,"NM_001312893",12960,"Mm.29488","NM_023695","ENSMUSG00000029343","Crybb1","3110006K12Rik|BB1CRY","crystallin, beta B1","protein-coding"]
[2187,"chr3",121723187,121723883,"+",0,"NA","promoter-TSS (NM_010171)","promoter-TSS (NM_010171)",-2,"NM_010171",14066,"Mm.273188","NM_010171","ENSMUSG00000028128","F3","AA409063|CD142|Cf-3|Cf3|TF","coagulation factor III","protein-coding"]
[1931,"chr2",109693436,109694431,"+",0,"NA","promoter-TSS (NM_001316310)","promoter-TSS (NM_001316310)",370,"NM_001048142",12064,"Mm.1442","NM_007540","ENSMUSG00000048482","Bdnf","-","brain derived neurotrophic factor","protein-coding"]
[3399,"chr9",64281362,64281885,"+",0,"NA","promoter-TSS (NM_025372)","promoter-TSS (NM_025372)",16,"NM_025372",66131,"Mm.196219","NM_025372","ENSMUSG00000032397","Tipin","1110005A05Rik|1110018P21Rik","timeless interacting protein","protein-coding"]
[694,"chr11",120098537,120099506,"+",0,"NA","promoter-TSS (NM_183137)","promoter-TSS (NM_183137)",87,"NM_001110242",208501,"Mm.46699","NM_001110242","ENSMUSG00000078572","1810043H04Rik","-","RIKEN cDNA 1810043H04 gene","protein-coding"]
[2844,"chr6",124663079,124663733,"+",0,"NA","intron (NM_145130, intron 1 of 12)","intron (NM_145130, intron 1 of 12)",302,"NM_145130",14792,"Mm.273915","NM_145130","ENSMUSG00000004270","Lpcat3","C3f|Grcc3f|Lpcat|Lpeat|Lplat5|Lpsat|Mboat5|Moact5|Oact5|PTG","lysophosphatidylcholine acyltransferase 3","protein-coding"]
[816,"chr12",108305723,108306895,"+",0,"NA","promoter-TSS (NM_001044380)","promoter-TSS (NM_001044380)",39,"NM_001044380",214305,"Mm.36423","NM_001044380","ENSMUSG00000021260","Hhipl1","1600002O04Rik|AK129450|mKIAA1822","hedgehog interacting protein-like 1","protein-coding"]
[1103,"chr15",39198051,39199376,"+",0,"NA","intron (NM_001256382, intron 1 of 26)","CpG-4870",427,"NM_053271",116838,"Mm.309296","NM_053271",null,"Rims2","2810036I15Rik|AW048769|RIM2|Rab3ip2|Rim2(+40A)|Rim2(+44A)|Rim2(+4A)|Serg2|Syt3-rs|mKIAA0751","regulating synaptic membrane exocytosis 2","protein-coding"]
[3031,"chr7",122066755,122067980,"+",0,"NA","promoter-TSS (NM_026140)","promoter-TSS (NM_026140)",169,"NM_138589",28018,"Mm.282122","NM_138589","ENSMUSG00000030870","Ubfd1","AI467302|D7Wsu105e|D7Wsu128e|Ubph","ubiquitin family domain containing 1","protein-coding"]
[3148,"chr8",54077214,54077956,"+",0,"NA","promoter-TSS (NM_009506)","promoter-TSS (NM_009506)",53,"NM_009506",22341,"Mm.1402","NM_009506","ENSMUSG00000031520","Vegfc","AW228853|VEGF-C","vascular endothelial growth factor C","protein-coding"]
[2244,"chr4",32800103,32800538,"+",0,"NA","promoter-TSS (NM_175364)","promoter-TSS (NM_175364)",61,"NM_175364",108755,"Mm.1182","NM_175364",null,"Lyrm2","2610208E05Rik","LYR motif containing 2","protein-coding"]
[3159,"chr8",69832282,69832920,"+",0,"NA","promoter-TSS (NM_001024954)","promoter-TSS (NM_001024954)",-103,"NM_001024954",80720,"Mm.210823","NM_030555","ENSMUSG00000031860","Pbx4","2410015M21Rik|AI429113|AW045266","pre B cell leukemia homeobox 4","protein-coding"]
[296,"chr10",80754862,80755831,"+",0,"NA","5' UTR (NM_199322, exon 1 of 28)","5' UTR (NM_199322, exon 1 of 28)",140,"NM_199322",208266,"Mm.152371","NM_199322","ENSMUSG00000061589","Dot1l","A630076O07|AW907654|Dot1|KMT4|mDot1","DOT1-like, histone H3 methyltransferase (S. cerevisiae)","protein-coding"]
[265,"chr10",79663815,79665153,"+",0,"NA","promoter-TSS (NM_013591)","promoter-TSS (NM_013591)",-90,"NM_013591",17123,"Mm.391556","NM_013591","ENSMUSG00000020310","Madcam1","AV211525","mucosal vascular addressin cell adhesion molecule 1","protein-coding"]
[1062,"chr14",77036119,77036998,"+",0,"NA","promoter-TSS (NM_175369)","promoter-TSS (NM_175369)",59,"NM_172488",210808,"Mm.89278","NM_172488","ENSMUSG00000044350","Lacc1","9030625A04Rik","laccase (multicopper oxidoreductase) domain containing 1","protein-coding"]
[3112,"chr8",11727660,11728851,"+",0,"NA","exon (NM_001113517, exon 1 of 19)","exon (NM_001113517, exon 1 of 19)",150,"NM_001113517",54126,"Mm.244068","NM_017402","ENSMUSG00000031511","Arhgef7","Cool|PIX|Pak3bp|betaPix|betaPix-b|betaPix-c|cool-1|mKIAA0142|p85Cool1|p85SPR","Rho guanine nucleotide exchange factor (GEF7)","protein-coding"]
[3169,"chr8",70768140,70768902,"+",0,"NA","3' UTR (NM_008841, exon 16 of 16)","3' UTR (NM_008841, exon 16 of 16)",-1858,"NM_023065",65972,"Mm.30241","NM_023065","ENSMUSG00000031838","Ifi30","GILT|IP30","interferon gamma inducible protein 30","protein-coding"]
[171,"chr1",187608946,187609772,"+",0,"NA","intron (NM_001243792, intron 1 of 7)","CpG",353,"NM_001243792",26381,"Mm.89989","NM_011935","ENSMUSG00000026610","Esrrg","ERR3|Errg|NR3B3|mKIAA0832","estrogen-related receptor gamma","protein-coding"]
[1700,"chr19",18749537,18750238,"+",0,"NA","promoter-TSS (NM_153417)","promoter-TSS (NM_153417)",-96,"NM_153417",225997,"Mm.215171","NM_153417","ENSMUSG00000024727","Trpm6","CHAK2|TRPM6/CHAK2","transient receptor potential cation channel, subfamily M, member 6","protein-coding"]
[2609,"chr5",115631312,115632038,"+",0,"NA","promoter-TSS (NM_198163)","promoter-TSS (NM_198163)",141,"NR_027810",66123,"Mm.133063","NM_021417","ENSMUSG00000107121","1110006O24Rik","-","RIKEN cDNA 1110006O24 gene","ncRNA"]
[3261,"chr8",111940438,111941543,"+",0,"NA","intron (NM_026693, intron 1 of 3)","CpG",287,"NM_026693",93739,"Mm.371666","NM_026693",null,"Gabarapl2","0610012F20Rik|2900019O08Rik|AI173605|GATE-16|Gef2","gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2","protein-coding"]
[445,"chr11",57644807,57645827,"+",0,"NA","promoter-TSS (NM_134189)","promoter-TSS (NM_134189)",-125,"NM_134189",171212,"Mm.271670","NM_134189","ENSMUSG00000020520","Galnt10","AU018154|C330012K04Rik|GalNAc-T10|GalNAc-T9|Galnt9|ppGaNTase","UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10","protein-coding"]
[2131,"chr3",84814036,84815879,"+",0,"NA","promoter-TSS (NM_001177773)","promoter-TSS (NM_001177773)",-620,"NM_001177773",50754,"Mm.196475","NM_080428","ENSMUSG00000028086","Fbxw7","1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10","F-box and WD-40 domain protein 7","protein-coding"]
[2687,"chr5",139149703,139150920,"+",0,"NA","promoter-TSS (NM_001081265)","promoter-TSS (NM_001081265)",88,"NM_001081265",433956,"Mm.5547","NM_001081265","ENSMUSG00000025857","Dnaaf5","BC053401|C76907|Heatr2","dynein, axonemal, assembly factor 5","protein-coding"]
[1339,"chr16",91372589,91373438,"+",0,"NA","5' UTR (NM_001110498, exon 1 of 7)","5' UTR (NM_001110498, exon 1 of 7)",230,"NM_001110498",15976,"Mm.6834","NM_010509","ENSMUSG00000022971","Ifnar2","AI747302|Ifnar-2","interferon (alpha and beta) receptor 2","protein-coding"]
[2338,"chr4",124850160,124851566,"+",0,"NA","promoter-TSS (NM_001142727)","promoter-TSS (NM_001142727)",104,"NM_153566",230734,"Mm.258568","NM_153566","ENSMUSG00000028889","Yrdc","AV303379|BC023823|IRIP|ITIP","yrdC domain containing (E.coli)","protein-coding"]
[2012,"chr2",156196558,156197138,"+",0,"NA","intron (NM_172674, intron 1 of 17)","CpG",201,"NM_172674",228829,"Mm.427078","NM_172674","ENSMUSG00000038116","Phf20","6820402O20Rik","PHD finger protein 20","protein-coding"]
[3201,"chr8",84990352,84991064,"+",0,"NA","exon (NM_133255, exon 1 of 22)","exon (NM_133255, exon 1 of 22)",113,"NM_001167991",170833,"Mm.247775","NM_133255","ENSMUSG00000052566","Hook2","A630054I03Rik","hook homolog 2 (Drosophila)","protein-coding"]
[582,"chr11",93885039,93886516,"+",0,"NA","promoter-TSS (NM_134012)","promoter-TSS (NM_134012)",-11,"NM_001013375",217109,"Mm.379350","NM_001013375","ENSMUSG00000054079","Utp18","6230425C22Rik|6430513M13|Wdr50","UTP18, small subunit (SSU) processome component, homolog (yeast)","protein-coding"]
[3257,"chr8",110721023,110721578,"+",0,"NA","promoter-TSS (NM_198625)","promoter-TSS (NM_198625)",-176,"NM_198625",244654,"Mm.490385","NM_198625","ENSMUSG00000033763","Mtss1l","ABBA","metastasis suppressor 1-like","protein-coding"]
[1884,"chr2",58567072,58567741,"+",0,"NA","promoter-TSS (NM_007394)","promoter-TSS (NM_007394)",72,"NM_001289660",76654,"Mm.200370","NM_029692","ENSMUSG00000026839","Upp2","1700124F02Rik|AI266885|UDRPASE2|UP2|UPASE2","uridine phosphorylase 2","protein-coding"]
[2120,"chr3",63295397,63296273,"+",0,"NA","promoter-TSS (NM_008604)","promoter-TSS (NM_008604)",-37,"NM_008604",17380,"Mm.296022","NM_008604",null,"Mme","6030454K05Rik|C85356|CALLA|CD10|NEP|SFE","membrane metallo endopeptidase","protein-coding"]
[1858,"chr2",32712627,32713309,"+",0,"NA","promoter-TSS (NR_037217)","promoter-TSS (NR_037217)",4,"NR_039536",100628606,null,"NR_039536","ENSMUSG00000105841","Mir3960","mmu-mir-3960","microRNA 3960","ncRNA"]
[557,"chr11",83440286,83441197,"+",0,"NA","exon (NM_025492, exon 3 of 3)","exon (NM_025492, exon 3 of 3)",3047,"NM_025492",66330,"Mm.44800","NM_025492","ENSMUSG00000035085","1700020L24Rik","-","RIKEN cDNA 1700020L24 gene","protein-coding"]
[718,"chr12",4133213,4134014,"+",0,"NA","promoter-TSS (NM_138305)","promoter-TSS (NM_138305)",216,"NM_001159537",104111,"Mm.489807","NM_138305","ENSMUSG00000020654","Adcy3","AC3|mKIAA0511","adenylate cyclase 3","protein-coding"]
[2147,"chr3",89246252,89247028,"+",0,"NA","promoter-TSS (NM_183037)","promoter-TSS (NM_183037)",167,"NM_001310625",66059,"Mm.177991","NM_025327","ENSMUSG00000042747","Krtcap2","0610010I12Rik|Kcp2","keratinocyte associated protein 2","protein-coding"]
[1581,"chr18",57354531,57355400,"+",0,"NA","intron (NM_028447, intron 1 of 8)","CpG",232,"NM_028447",73137,"Mm.29889","NM_028447","ENSMUSG00000024594","Prrc1","1190002C06Rik|2310058D16Rik|3110038B19Rik|9430085A19Rik","proline-rich coiled-coil 1","protein-coding"]
[1507,"chr17",74338609,74339607,"+",0,"NA","exon (NM_001162870, exon 1 of 17)","exon (NM_001162870, exon 1 of 17)",121,"NM_016962",50850,"Mm.19804","NM_016962","ENSMUSG00000024068","Spast","Spg4|mKIAA1083","spastin","protein-coding"]
[1604,"chr18",73572682,73573844,"+",0,"NA","exon (NM_001039214, exon 1 of 2)","exon (NM_001039214, exon 1 of 2)",558,"NM_001039214",240396,"Mm.24131","NM_001039214","ENSMUSG00000037253","Mex3c","A130001D14Rik|BC035207|BM-013|Rkhd2","mex3 homolog C (C. elegans)","protein-coding"]
[2726,"chr6",6863293,6864378,"+",0,"NA","TTS (NR_002839)","TTS (NR_002839)",501,"NM_010057",13396,"Mm.439763","NM_010057","ENSMUSG00000029754","Dlx6","-","distal-less homeobox 6","protein-coding"]
[441,"chr11",54866281,54867059,"+",0,"NA","intron (NM_008248, intron 1 of 2)","CpG",232,"NM_008248",15254,"Mm.425","NM_008248","ENSMUSG00000020267","Hint1","AA673479|Hint|Ipk1|PKCI-1|PRKCNH1","histidine triad nucleotide binding protein 1","protein-coding"]
[868,"chr13",34002055,34002891,"+",0,"NA","promoter-TSS (NM_009068)","promoter-TSS (NM_009068)",321,"NM_001243192",20719,"Mm.252210","NM_009254","ENSMUSG00000060147","Serpinb6a","4930482L21Rik|D330015H01Rik|PI-6|Serpinb6|Spi3|ovalbumin","serine (or cysteine) peptidase inhibitor, clade B, member 6a","protein-coding"]
[3325,"chr9",21015156,21016196,"+",0,"NA","promoter-TSS (NM_010493)","promoter-TSS (NM_010493)",-284,"NM_010493",15894,"Mm.435508","NM_010493","ENSMUSG00000037405","Icam1","CD54|Icam-1|Ly-47|MALA-2","intercellular adhesion molecule 1","protein-coding"]
[672,"chr11",116077351,116078589,"+",0,"NA","promoter-TSS (NM_001009573)","promoter-TSS (NM_001009573)",-9,"NM_001009573",70450,"Mm.259460","NM_001009573","ENSMUSG00000057948","Unc13d","2610108D09Rik|Jinx|Munc13-4|mFLJ00067","unc-13 homolog D (C. elegans)","protein-coding"]
[1140,"chr15",76432887,76433556,"+",0,"NA","promoter-TSS (NR_105919)","promoter-TSS (NR_105919)",7,"NR_105919",102465576,null,"NR_105919","ENSMUSG00000099260","Mir6954","Gm27770|mmu-mir-6954","microRNA 6954","ncRNA"]
[3417,"chr9",74952557,74953449,"+",0,"NA","promoter-TSS (NM_001113283)","promoter-TSS (NM_001113283)",-50,"NM_001113283",235493,"Mm.208955","NM_153584","ENSMUSG00000034858","Fam214a","6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370","family with sequence similarity 214, member A","protein-coding"]
[983,"chr14",26579414,26580040,"+",0,"NA","exon (NM_145969, exon 1 of 18)","exon (NM_145969, exon 1 of 18)",177,"NM_145969",211922,"Mm.260512","NM_145969","ENSMUSG00000040818","Dennd6a","Fam116a","DENN/MADD domain containing 6A","protein-coding"]
[275,"chr10",79916707,79917331,"+",0,"NA","promoter-TSS (NM_053244)","promoter-TSS (NM_053244)",48,"NM_053244",114229,"Mm.191035","NM_053244","ENSMUSG00000035773","Kiss1r","Gpr54|KiSS-1","KISS1 receptor","protein-coding"]
[2035,"chr2",163471919,163472859,"+",0,"NA","promoter-TSS (NR_028122)","promoter-TSS (NR_028122)",-156,"NR_028122",69517,"Mm.395343","NR_028122","ENSMUSG00000053353","2310001K24Rik","-","RIKEN cDNA 2310001K24 gene","ncRNA"]
[197,"chr10",18055138,18056295,"+",0,"NA","promoter-TSS (NM_001111065)","promoter-TSS (NM_001111065)",-224,"NM_009048",19707,"Mm.4479","NM_009048","ENSMUSG00000019854","Reps1","BB161292","RalBP1 associated Eps domain containing protein","protein-coding"]
[3314,"chr8",127063637,127065236,"+",0,"NA","exon (NM_001122850, exon 1 of 16)","exon (NM_001122850, exon 1 of 16)",380,"NM_001309391",93742,"Mm.299254","NM_033620","ENSMUSG00000025812","Pard3","AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip","par-3 family cell polarity regulator","protein-coding"]
[2208,"chr3",142764917,142765649,"+",0,"NA","promoter-TSS (NM_145546)","promoter-TSS (NM_145546)",36,"NM_145546",229906,"Mm.271756","NM_145546","ENSMUSG00000028271","Gtf2b","-","general transcription factor IIB","protein-coding"]
[1731,"chr19",42035515,42036311,"+",0,"NA","promoter-TSS (NM_020033)","promoter-TSS (NM_020033)",-125,"NM_020033",56642,"Mm.143737","NM_020033","ENSMUSG00000025172","Ankrd2","Arpp|mArpp","ankyrin repeat domain 2 (stretch responsive muscle)","protein-coding"]
[3496,"chr9",120492248,120493406,"+",0,"NA","exon (NM_026892, exon 1 of 4)","exon (NM_026892, exon 1 of 4)",221,"NM_026892",68969,"Mm.28753","NM_026892","ENSMUSG00000006941","Eif1b","1500010M16Rik|3110001N14Rik|Gc20","eukaryotic translation initiation factor 1B","protein-coding"]
[853,"chr13",9093747,9094769,"+",0,"NA","intron (NM_001311117, intron 1 of 16)","CpG",377,"NM_172585",217980,"Mm.234944","NM_172585","ENSMUSG00000033499","Larp4b","A630096F19|AI256361|D13Wsu64e|Larp5","La ribonucleoprotein domain family, member 4B","protein-coding"]
[751,"chr12",69196988,69198549,"+",0,"NA","non-coding (NR_033222, exon 2 of 2)","non-coding (NR_033222, exon 2 of 2)",557,"NR_033222",414085,"Mm.256223","NR_033222","ENSMUSG00000097061","9330151L19Rik","-","RIKEN cDNA 9330151L19 gene","ncRNA"]
[1500,"chr17",69383140,69384343,"+",0,"NA","promoter-TSS (NM_009547)","promoter-TSS (NM_009547)",-237,"NM_009547",22666,"Mm.29434","NM_009547","ENSMUSG00000049672","Zbtb14","ZF5|Zfp161|b2b1982Clo","zinc finger and BTB domain containing 14","protein-coding"]
[1746,"chr19",46305885,46306483,"+",0,"NA","intron (NM_001177370, intron 1 of 21)","intron (NM_001177370, intron 1 of 21)",254,"NM_001177370",18034,"Mm.102365","NM_019408","ENSMUSG00000025225","Nfkb2","NF-kappaB2|lyt|p49|p49/p100|p50B|p52","nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100","protein-coding"]
[3356,"chr9",45138040,45139196,"+",0,"NA","promoter-TSS (NM_001013390)","promoter-TSS (NM_001013390)",-424,"NM_001013390",399548,"Mm.335112","NM_001013390","ENSMUSG00000046480","Scn4b","Gm1471","sodium channel, type IV, beta","protein-coding"]
[2167,"chr3",99253566,99254429,"+",0,"NA","exon (NM_009323, exon 1 of 8)","exon (NM_009323, exon 1 of 8)",237,"NM_009323",21384,"Mm.88761","NM_009323","ENSMUSG00000027868","Tbx15","Tbx14|Tbx8|de","T-box 15","protein-coding"]
[2136,"chr3",88141815,88143701,"+",0,"NA","intron (NM_001310587, intron 1 of 11)","CpG",386,"NM_001310593",17261,"Mm.28184","NM_133665","ENSMUSG00000001419","Mef2d","C80750","myocyte enhancer factor 2D","protein-coding"]
[1980,"chr2",131126987,131127920,"+",0,"NA","promoter-TSS (NM_028306)","promoter-TSS (NM_028306)",41,"NM_028306",72630,"Mm.277465","NM_028306","ENSMUSG00000074793","Hspa12b","2700081N06Rik","heat shock protein 12B","protein-coding"]
[2275,"chr4",53439894,53440708,"+",0,"NA","promoter-TSS (NM_133891)","promoter-TSS (NM_133891)",-112,"NM_001159633",100434,"Mm.482207","NM_133891","ENSMUSG00000028412","Slc44a1","2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92","solute carrier family 44, member 1","protein-coding"]
[2685,"chr5",138622551,138623278,"+",0,"NA","promoter-TSS (NM_183025)","promoter-TSS (NM_183025)",55,"NM_183025",243308,"Mm.36612","NM_183025","ENSMUSG00000056014","A430033K04Rik","C86988","RIKEN cDNA A430033K04 gene","protein-coding"]
[3517,"chrX",73228107,73228616,"+",0,"NA","promoter-TSS (NM_007978)","promoter-TSS (NM_007978)",55,"NM_007978",14070,"Mm.165807","NM_007978","ENSMUSG00000078317","F8a","AI852759|DXUcsf1|F8a1","factor 8-associated gene A","protein-coding"]
[3410,"chr9",71215188,71216293,"+",0,"NA","promoter-TSS (NR_110519)","promoter-TSS (NR_110519)",-49,"NM_009022",19378,"Mm.42016","NM_009022","ENSMUSG00000013584","Aldh1a2","AV116159|Aldh1a7|Raldh1|Raldh2","aldehyde dehydrogenase family 1, subfamily A2","protein-coding"]
[3028,"chr7",120917576,120918554,"+",0,"NA","intron (NM_001164096, intron 1 of 19)","CpG",321,"NM_001164096",26939,"Mm.193632","NM_025298","ENSMUSG00000030880","Polr3e","RPC5|Sin","polymerase (RNA) III (DNA directed) polypeptide E","protein-coding"]
[1295,"chr16",31947963,31948723,"+",0,"NA","promoter-TSS (NM_026554)","promoter-TSS (NM_026554)",178,"NR_027897",106264,"Mm.347369","NM_025320","ENSMUSG00000107002","0610012G03Rik","AI839730","RIKEN cDNA 0610012G03 gene","ncRNA"]
[2832,"chr6",117906662,117908264,"+",0,"NA","promoter-TSS (NM_001166429)","intron (NM_133834, intron 1 of 3)",-341,"NM_001166428",98758,"Mm.422979","NM_133834","ENSMUSG00000042079","Hnrnpf","4833420I20Rik|AA407306|Hnrpf","heterogeneous nuclear ribonucleoprotein F","protein-coding"]
[677,"chr11",117076484,117077397,"+",0,"NA","promoter-TSS (NR_105853)","promoter-TSS (NR_105853)",157,"NR_027059",76972,"Mm.309167","NR_027059","ENSMUSG00000086859","Snhg20","2810008D09Rik","small nucleolar RNA host gene 20","ncRNA"]
[1111,"chr15",57985509,57986373,"+",0,"NA","promoter-TSS (NM_173862)","promoter-TSS (NM_173862)",38,"NM_173862",239463,"Mm.221241","NM_173862",null,"Fam83a","-","family with sequence similarity 83, member A","protein-coding"]
[3281,"chr8",120537676,120538959,"+",0,"NA","promoter-TSS (NR_106159)","promoter-TSS (NR_106159)",-379,"NR_106159",102466849,null,"NR_106159","ENSMUSG00000098280","Mir7687","Gm27573|mmu-mir-7687","microRNA 7687","ncRNA"]
[907,"chr13",55692886,55693740,"+",0,"NA","5' UTR (NM_181278, exon 1 of 2)","5' UTR (NM_181278, exon 1 of 2)",189,"NM_181278",78521,"Mm.28449","NM_181278","ENSMUSG00000045767","B230219D22Rik","AA119856|D530037I19Rik","RIKEN cDNA B230219D22 gene","protein-coding"]
[3249,"chr8",107031215,107031980,"+",0,"NA","intron (NM_126165, intron 1 of 10)","CpG",271,"NM_126165",116733,"Mm.236004","NM_126165","ENSMUSG00000031913","Vps4a","4930589C15Rik|AI325971|AW553189","vacuolar protein sorting 4a (yeast)","protein-coding"]
[3271,"chr8",119394815,119395771,"+",0,"NA","exon (NM_019966, exon 1 of 5)","exon (NM_019966, exon 1 of 5)",401,"NM_019966",56690,"Mm.423037","NM_019966","ENSMUSG00000074064","Mlycd","AI324784|Mcd","malonyl-CoA decarboxylase","protein-coding"]
[2238,"chr4",21930911,21931788,"+",0,"NA","promoter-TSS (NM_175234)","promoter-TSS (NM_175234)",23,"NM_175234",76132,"Mm.159689","NM_175234",null,"Faxc","6230409E13Rik|AW742931","failed axon connections homolog (Drosophila)","protein-coding"]
[1868,"chr2",35582434,35583198,"+",0,"NA","promoter-TSS (NM_001290637)","promoter-TSS (NM_001290637)",-24,"NM_001290637",69601,"Mm.29629","NM_001001602","ENSMUSG00000026883","Dab2ip","2310011D08Rik|AI480459|Aip1|mKIAA1743","disabled 2 interacting protein","protein-coding"]
[3480,"chr9",110333090,110333856,"+",0,"NA","5' UTR (NM_001001144, exon 1 of 23)","5' UTR (NM_001001144, exon 1 of 23)",117,"NM_001001144",235623,"Mm.288741","NM_001001144","ENSMUSG00000032485","Scap","9530044G19|mKIAA0199","SREBF chaperone","protein-coding"]
[3154,"chr8",68793552,68794342,"+",0,"NA","promoter-TSS (NM_027590)","promoter-TSS (NM_027590)",18,"NM_001293792",70885,"Mm.252421","NM_027590","ENSMUSG00000031864","Ints10","4921521J11Rik|AI462004","integrator complex subunit 10","protein-coding"]
[590,"chr11",96251441,96252150,"+",0,"NA","non-coding (NR_037977, exon 1 of 3)","non-coding (NR_037977, exon 1 of 3)",135,"NR_037977",193022,"Mm.169508","NR_037977",null,"Gm53","-","predicted gene 53","ncRNA"]
[1210,"chr15",98789762,98790411,"+",0,"NA","5' UTR (NM_021279, exon 1 of 4)","5' UTR (NM_021279, exon 1 of 4)",229,"NM_021279",22408,"Mm.1123","NM_021279","ENSMUSG00000022997","Wnt1","Int-1|Wnt-1|sw|swaying","wingless-type MMTV integration site family, member 1","protein-coding"]
[664,"chr11",115475475,115476219,"+",0,"NA","5' UTR (NM_177778, exon 1 of 3)","5' UTR (NM_177778, exon 1 of 3)",170,"NM_177778",276905,"Mm.38019","NM_177778","ENSMUSG00000057219","Armc7","A630084C13|BC023126","armadillo repeat containing 7","protein-coding"]
[1790,"chr2",20968431,20969418,"+",0,"NA","promoter-TSS (NR_033225)","promoter-TSS (NR_033225)",50,"NR_033225",433408,"Mm.386941","NR_033225",null,"Gm13375","OTTMUSG00000011664","predicted gene 13375","ncRNA"]
[1878,"chr2",49619081,49619908,"+",0,"NA","5' UTR (NM_008449, exon 1 of 26)","5' UTR (NM_008449, exon 1 of 26)",180,"NM_008449",16574,"Mm.256342","NM_008449","ENSMUSG00000026764","Kif5c","KINN|Khc|NKHC|NKHC2","kinesin family member 5C","protein-coding"]
[2388,"chr4",135727791,135728362,"+",0,"NA","promoter-TSS (NM_178257)","promoter-TSS (NM_178257)",-83,"NM_178257",230828,"Mm.261647","NM_178257",null,"Il22ra1","9130219A07Rik|ENSMUSG00000073746|IL-22R|Il22r","interleukin 22 receptor, alpha 1","protein-coding"]
[2938,"chr7",46396259,46397307,"+",0,"NA","5' UTR (NM_008421, exon 1 of 2)","5' UTR (NM_008421, exon 1 of 2)",315,"NM_001112739",16502,"Mm.249386","NM_008421","ENSMUSG00000058975","Kcnc1","C230009H10Rik|KShIIIB|KV4|Kcr2-1|Kv3.1|NGK2|Shaw","potassium voltage gated channel, Shaw-related subfamily, member 1","protein-coding"]
[2264,"chr4",45184457,45185417,"+",0,"NA","promoter-TSS (NM_001081172)","promoter-TSS (NM_001081172)",31,"NM_001081172",666060,"Mm.24783","NM_001081172","ENSMUSG00000035615","Frmpd1","BC031840|mKIAA0967","FERM and PDZ domain containing 1","protein-coding"]
[2964,"chr7",79810407,79810829,"+",0,"NA","promoter-TSS (NM_008589)","promoter-TSS (NM_008589)",-109,"NM_008589",17293,"Mm.31472","NM_008589","ENSMUSG00000030543","Mesp2","bHLHc6","mesoderm posterior 2","protein-coding"]
[1690,"chr19",10388497,10389097,"+",0,"NA","promoter-TSS (NM_018801)","promoter-TSS (NM_018801)",-293,"NM_018801",54525,"Mm.182654","NM_018801","ENSMUSG00000024743","Syt7","AI851541|B230112P13Rik","synaptotagmin VII","protein-coding"]
[617,"chr11",101176087,101176666,"+",0,"NA","promoter-TSS (NM_007721)","promoter-TSS (NM_007721)",259,"NM_016782",53321,"Mm.474527","NM_016782","ENSMUSG00000017167","Cntnap1","AI841080|Caspr|NCP1|Nrxn4|p190|shm","contactin associated protein-like 1","protein-coding"]
[79,"chr1",89454480,89455281,"+",0,"NA","promoter-TSS (NM_001037136)","promoter-TSS (NM_001037136)",69,"NM_001037136",347722,"Mm.291135","NM_178119","ENSMUSG00000055013","Agap1","Centg2|Ggap1|R75364|mKIAA1099","ArfGAP with GTPase domain, ankyrin repeat and PH domain 1","protein-coding"]
[1420,"chr17",28800426,28801447,"+",0,"NA","promoter-TSS (NM_001081315)","promoter-TSS (NM_001081315)",-190,"NM_001081315",268936,"Mm.291877","NM_199061","ENSMUSG00000063952","Brpf3","AI413466|AW493400|mKIAA1286","bromodomain and PHD finger containing, 3","protein-coding"]
[3295,"chr8",123041356,123042919,"+",0,"NA","promoter-TSS (NR_045268)","promoter-TSS (NR_045268)",147,"NR_037865",77087,"Mm.31567","NM_001081379","ENSMUSG00000035569","Ankrd11","2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod","ankyrin repeat domain 11","protein-coding"]
[3437,"chr9",98954554,98956796,"+",0,"NA","promoter-TSS (NM_012020)","promoter-TSS (NM_012020)",68,"NM_012020",26927,"Mm.151239","NM_012020",null,"Foxl2","AU045128|BPES|PINTO|Pfrk","forkhead box L2","protein-coding"]
[352,"chr10",121033947,121034552,"+",0,"NA","5' UTR (NM_011915, exon 1 of 10)","5' UTR (NM_011915, exon 1 of 10)",245,"NM_011915",24117,"Mm.32831","NM_011915","ENSMUSG00000020218","Wif1","AW107799|WIF-1","Wnt inhibitory factor 1","protein-coding"]
[2502,"chr5",31697343,31698318,"+",0,"NA","promoter-TSS (NM_181282)","promoter-TSS (NM_181282)",-220,"NM_153196",71336,"Mm.22519","NM_153196","ENSMUSG00000029136","Rbks","5230400M11Rik|AI326806|RBSK","ribokinase","protein-coding"]
[2918,"chr7",44246692,44247202,"+",0,"NA","intron (NM_025880, intron 1 of 5)","CpG",225,"NM_025880",668661,"Mm.274492","NM_025880","ENSMUSG00000045411","2410002F23Rik","-","RIKEN cDNA 2410002F23 gene","protein-coding"]
[126,"chr1",136624577,136625485,"+",0,"NA","5' UTR (NM_177643, exon 1 of 2)","5' UTR (NM_177643, exon 1 of 2)",130,"NM_001160251",226442,"Mm.62521","NM_177643","ENSMUSG00000041483","Zfp281","Znf281","zinc finger protein 281","protein-coding"]
[251,"chr10",75036852,75037499,"+",0,"NA","promoter-TSS (NM_029781)","promoter-TSS (NM_029781)",86,"NM_029781",76877,"Mm.133593","NM_029781","ENSMUSG00000020175","Rab36","6330593L16Rik|AW047545","RAB36, member RAS oncogene family","protein-coding"]
[1034,"chr14",59201198,59201826,"+",0,"NA","5' UTR (NM_027764, exon 1 of 12)","5' UTR (NM_027764, exon 1 of 12)",284,"NM_027764",71330,"Mm.234195","NM_027764","ENSMUSG00000035469","Rcbtb1","5430409I18Rik|AW111883|CLLD7|CLLL7","regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1","protein-coding"]
[1594,"chr18",65800319,65801106,"+",0,"NA","intron (NM_025468, intron 1 of 5)","intron (NM_025468, intron 1 of 5)",134,"NM_025468",66286,"Mm.27800","NM_025468","ENSMUSG00000024516","Sec11c","1810029G24Rik|Sec11l3","SEC11 homolog C, signal peptidase complex subunit","protein-coding"]
[2803,"chr6",90462191,90463871,"+",0,"NA","intron (NM_023184, intron 1 of 2)","CpG",405,"NM_023184",66277,"Mm.38343","NM_023184","ENSMUSG00000030087","Klf15","1810013I09Rik|AV048136|AW494632|CKLF|KKLF","Kruppel-like factor 15","protein-coding"]
[2875,"chr7",13023930,13024745,"+",0,"NA","5' UTR (NM_011588, exon 1 of 17)","5' UTR (NM_011588, exon 1 of 17)",185,"NM_011588",21849,"Mm.15701","NM_011588","ENSMUSG00000005566","Trim28","AA408787|KAP-1|KRIP-1|MommeD9|Tif1b|Tif1beta","tripartite motif-containing 28","protein-coding"]
[369,"chr10",128322308,128323209,"+",0,"NA","5' UTR (NM_019953, exon 1 of 6)","5' UTR (NM_019953, exon 1 of 6)",299,"NM_019953",56530,"Mm.44220","NM_019953","ENSMUSG00000025381","Cnpy2","5330432A10Rik|AW229003|D10Bwg1546e|Tmem4|Zsig9","canopy 2 homolog (zebrafish)","protein-coding"]
[1533,"chr18",11839119,11840618,"+",0,"NA","promoter-TSS (NR_045421)","promoter-TSS (NR_045421)",-491,"NR_045421",621998,"Mm.353277","NR_045421",null,"Gm6277","-","predicted gene 6277","ncRNA"]
[1548,"chr18",31931257,31931817,"+",0,"NA","promoter-TSS (NM_144862)","promoter-TSS (NM_144862)",30,"NM_144862",225341,"Mm.24551","NM_144862","ENSMUSG00000024395","Lims2","PINCH2","LIM and senescent cell antigen like domains 2","protein-coding"]
[651,"chr11",109650801,109651326,"+",0,"NA","5' UTR (NM_021880, exon 1 of 11)","5' UTR (NM_021880, exon 1 of 11)",142,"NM_001313976",19084,"Mm.30039","NM_021880","ENSMUSG00000020612","Prkar1a","1300018C22Rik|RIalpha|Tse-1|Tse1","protein kinase, cAMP dependent regulatory, type I, alpha","protein-coding"]
[176,"chr1",191718318,191719180,"+",0,"NA","intron (NM_001134829, intron 1 of 7)","CpG",354,"NM_001134829",226856,"Mm.277958","NM_172266","ENSMUSG00000026623","Lpgat1","AI649174|AW112037|BC013667","lysophosphatidylglycerol acyltransferase 1","protein-coding"]
[3145,"chr8",46471019,46471769,"+",0,"NA","intron (NM_007981, intron 1 of 20)","CpG",357,"NM_007981",14081,"Mm.210323","NM_007981","ENSMUSG00000018796","Acsl1","Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1","acyl-CoA synthetase long-chain family member 1","protein-coding"]
[947,"chr13",100650612,100651838,"+",0,"NA","promoter-TSS (NM_001283011)","promoter-TSS (NM_001283011)",-118,"NM_027139",108143,"Mm.301148","NM_027139","ENSMUSG00000052293","Taf9","2310012M09Rik|AA673500|AU045423|TAFII31|TAFII32|Taf2g","TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor","protein-coding"]
[256,"chr10",76032457,76033111,"+",0,"NA","intron (NM_177475, intron 1 of 1)","CpG",172,"NM_177475",64453,"Mm.80609","NM_177475","ENSMUSG00000049764","Zfp280b","D10Jhu82e|Suhw2","zinc finger protein 280B","protein-coding"]
[1823,"chr2",28533267,28533857,"+",0,"NA","promoter-TSS (NM_001145835)","promoter-TSS (NM_001145835)",98,"NM_001145836",19730,"Mm.5236","NM_009058","ENSMUSG00000026821","Ralgds","Gnds|Rgds|mKIAA1308","ral guanine nucleotide dissociation stimulator","protein-coding"]
[2537,"chr5",65390804,65391764,"+",0,"NA","promoter-TSS (NM_024471)","promoter-TSS (NM_024471)",147,"NM_011292",20005,"Mm.300271","NM_011292","ENSMUSG00000047215","Rpl9","-","ribosomal protein L9","protein-coding"]
[2267,"chr4",45972049,45973065,"+",0,"NA","intron (NM_146142, intron 1 of 16)","CpG",260,"NM_146142",100121,"Mm.275413","NM_146142","ENSMUSG00000035517","Tdrd7","5730495N10Rik|AI447470|PCTAIRE2BP","tudor domain containing 7","protein-coding"]
[2810,"chr6",92091401,92092221,"+",0,"NA","intron (NM_011630, intron 1 of 14)","CpG",393,"NM_011630",22026,"Mm.87062","NM_011630","ENSMUSG00000005893","Nr2c2","TAK1|Tr4|mKIAA4145","nuclear receptor subfamily 2, group C, member 2","protein-coding"]
[920,"chr13",73260141,73261651,"+",0,"NA","intron (NM_018885, intron 1 of 5)","CpG",399,"NM_018885",50916,"Mm.103784","NM_018885","ENSMUSG00000021604","Irx4","-","Iroquois related homeobox 4 (Drosophila)","protein-coding"]
[428,"chr11",52098145,52099730,"+",0,"NA","5' UTR (NM_019411, exon 1 of 7)","5' UTR (NM_019411, exon 1 of 7)",113,"NM_019411",19052,"Mm.260288","NM_019411",null,"Ppp2ca","PP2A|R75353","protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform","protein-coding"]
[2305,"chr4",101647678,101648186,"+",0,"NA","intron (NM_175036, intron 1 of 3)","CpG",149,"NM_175036",230514,"Mm.4756","NM_175036","ENSMUSG00000035212","Leprot","LEPR|OB-RGRP|Obrgrp|VPS55","leptin receptor overlapping transcript","protein-coding"]
[887,"chr13",48662885,48664008,"+",0,"NA","intron (NM_007526, intron 1 of 3)","CpG",410,"NM_007526",12022,"Mm.42241","NM_007526","ENSMUSG00000021381","Barx1","-","BarH-like homeobox 1","protein-coding"]
[72,"chr1",86358549,86360228,"+",0,"NA","promoter-TSS (NM_010880)","promoter-TSS (NM_010880)",67,"NM_010880",17975,"Mm.154378","NM_010880","ENSMUSG00000026234","Ncl","B530004O11Rik|C23|D0Nds28|D1Nds28|Nucl","nucleolin","protein-coding"]
[3371,"chr9",52047742,52049002,"+",0,"NA","5' UTR (NM_009041, exon 1 of 14)","5' UTR (NM_009041, exon 1 of 14)",333,"NR_023357",629557,"Mm.422775","NR_023357",null,"Gm6981","EG629557","glyceraldehyde-3-phosphate dehydrogenase pseudogene","pseudo"]
[500,"chr11",70844476,70845496,"+",0,"NA","exon (NM_019400, exon 1 of 18)","exon (NM_019400, exon 1 of 18)",225,"NM_001291142",54189,"Mm.7087","NM_019400","ENSMUSG00000020817","Rabep1","Rab5ep|rabaptin-5|rabaptin-5alpha","rabaptin, RAB GTPase binding effector protein 1","protein-coding"]
[1221,"chr15",100761554,100762518,"+",0,"NA","intron (NM_021530, intron 1 of 24)","CpG",289,"NM_021530",59033,"Mm.209856","NM_021530","ENSMUSG00000023032","Slc4a8","AW493845|C230026C11|NDCBE|kNBC-3","solute carrier family 4 (anion exchanger), member 8","protein-coding"]
[1496,"chr17",57249225,57250169,"+",0,"NA","intron (NM_134125, intron 1 of 13)","intron (NM_134125, intron 1 of 13)",246,"NM_001242389",106628,"Mm.37368","NM_134125","ENSMUSG00000019487","Trip10","AI646975|Cip4","thyroid hormone receptor interactor 10","protein-coding"]
[1200,"chr15",89475572,89476457,"+",0,"NA","promoter-TSS (NR_077233)","promoter-TSS (NR_077233)",-238,"NR_077233",100532730,"Mm.461541","NR_077233",null,"C230037L18Rik","-","RIKEN cDNA C230037L18 gene","ncRNA"]
[1757,"chr19",53528661,53529982,"+",0,"NA","promoter-TSS (NM_001085390)","promoter-TSS (NM_001085390)",3,"NM_001085390",240672,"Mm.482424","NM_001085390",null,"Dusp5","Gm337","dual specificity phosphatase 5","protein-coding"]
[918,"chr13",68581751,68582538,"+",0,"NA","promoter-TSS (NM_172480)","promoter-TSS (NM_172480)",25,"NM_172480",210009,"Mm.205514","NM_172480","ENSMUSG00000034617","Mtrr","4732420G08|MSR","5-methyltetrahydrofolate-homocysteine methyltransferase reductase","protein-coding"]
[1682,"chr19",8892736,8893391,"+",0,"NA","promoter-TSS (NM_176843)","promoter-TSS (NM_176843)",76,"NM_176843",109077,"Mm.290474","NM_176843","ENSMUSG00000071652","Ints5","1110055N21Rik|mKIAA1698","integrator complex subunit 5","protein-coding"]
[2781,"chr6",83121158,83122392,"+",0,"NA","promoter-TSS (NM_001083923)","promoter-TSS (NM_001083923)",-314,"NM_001083922",22377,"Mm.1109","NM_016757","ENSMUSG00000030035","Wbp1","AI255152","WW domain binding protein 1","protein-coding"]
[1413,"chr17",28176644,28177692,"+",0,"NA","promoter-TSS (NM_172617)","promoter-TSS (NM_172617)",-250,"NM_172617",224656,"Mm.267359","NM_172617","ENSMUSG00000024220","Zfp523","2810027J07|BC025615|Znf76","zinc finger protein 523","protein-coding"]
[2107,"chr3",52267552,52269417,"+",0,"NA","5' UTR (NM_019739, exon 1 of 3)","5' UTR (NM_019739, exon 1 of 3)",147,"NM_019739",56458,"Mm.29891","NM_019739",null,"Foxo1","AI876417|Afxh|FKHR|Fkhr1|Foxo1a","forkhead box O1","protein-coding"]
[1108,"chr15",44787464,44788242,"+",0,"NA","promoter-TSS (NR_040309)","promoter-TSS (NR_040309)",90,"NR_040309",69659,"Mm.352401","NR_040309","ENSMUSG00000097102","2310069G16Rik","-","RIKEN cDNA 2310069G16 gene","ncRNA"]
[1275,"chr16",18347797,18349084,"+",0,"NA","5' UTR (NM_001272029, exon 1 of 18)","5' UTR (NM_001272029, exon 1 of 18)",258,"NM_001272029",11877,"Mm.293599","NM_033474","ENSMUSG00000000325","Arvcf","-","armadillo repeat gene deleted in velo-cardio-facial syndrome","protein-coding"]
[2211,"chr3",145923904,145924919,"+",0,"NA","5' UTR (NM_009740, exon 1 of 3)","5' UTR (NM_009740, exon 1 of 3)",149,"NM_009740",12042,"Mm.239141","NM_009740","ENSMUSG00000028191","Bcl10","AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10","B cell leukemia/lymphoma 10","protein-coding"]
[1598,"chr18",67390148,67391484,"+",0,"NA","promoter-TSS (NM_026473)","promoter-TSS (NM_026473)",85,"NM_026473",67951,"Mm.181860","NM_026473","ENSMUSG00000001473","Tubb6","2310057H16Rik|BB220206","tubulin, beta 6 class V","protein-coding"]
[3453,"chr9",106463158,106463986,"+",0,"NA","TTS (NM_001159652)","TTS (NM_001159652)",2368,"NM_001159652",436090,"Mm.482905","NM_001159652","ENSMUSG00000091735","Gpr62","4933402E03Rik","G protein-coupled receptor 62","protein-coding"]
[2282,"chr4",59189017,59189901,"+",0,"NA","promoter-TSS (NM_011673)","promoter-TSS (NM_011673)",-91,"NM_011673",22234,"Mm.198803","NM_011673","ENSMUSG00000028381","Ugcg","AU043821|C80537|Epcs21|GlcT-1|Ugcgl","UDP-glucose ceramide glucosyltransferase","protein-coding"]
[1014,"chr14",46831772,46832753,"+",0,"NA","promoter-TSS (NM_026832)","promoter-TSS (NM_026832)",18,"NM_026832",68755,"Mm.343809","NM_026832","ENSMUSG00000055128","Cgrrf1","1110038G02Rik|1810009H17Rik|CGR19","cell growth regulator with ring finger domain 1","protein-coding"]
[2760,"chr6",52713606,52714440,"+",0,"NA","intron (NM_025816, intron 1 of 17)","CpG",294,"NM_025816",52440,"Mm.389757","NM_025816","ENSMUSG00000004535","Tax1bp1","1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151","Tax1 (human T cell leukemia virus type I) binding protein 1","protein-coding"]
[843,"chr12",112919705,112920504,"+",0,"NA","TTS (NR_105906)","TTS (NR_105906)",437,"NR_105906",102465567,null,"NR_105906","ENSMUSG00000098338","Mir6941","Gm27923|mmu-mir-6941","microRNA 6941","ncRNA"]
[1856,"chr2",32628808,32629931,"+",0,"NA","promoter-TSS (NM_021515)","promoter-TSS (NM_021515)",-131,"NM_021515",11636,"Mm.29189","NM_021515","ENSMUSG00000026817","Ak1","Ak-1|B430205N08Rik","adenylate kinase 1","protein-coding"]
[2529,"chr5",52833741,52834405,"+",0,"NA","promoter-TSS (NM_024213)","promoter-TSS (NM_024213)",-62,"NM_024213",52206,"Mm.272568","NM_024213",null,"Anapc4","2610306D21Rik|APC4|D5Ertd249e","anaphase promoting complex subunit 4","protein-coding"]
[1491,"chr17",56584731,56585501,"+",0,"NA","promoter-TSS (NM_001029979)","promoter-TSS (NM_001029979)",134,"NM_001163300",224903,"Mm.255066","NM_001163300","ENSMUSG00000071054","Safb","3110021E02Rik|5330423C17Rik|AU018122|D18386|E130307D12|HAP|HET|SAF-B1|SAFB1","scaffold attachment factor B","protein-coding"]
[1362,"chr17",14942838,14943437,"+",0,"NA","promoter-TSS (NM_001083881)","promoter-TSS (NM_001083881)",-13,"NM_175173",71682,"Mm.122698","NM_175173","ENSMUSG00000046991","Wdr27","0610012K18Rik","WD repeat domain 27","protein-coding"]
[1804,"chr2",25442524,25443648,"+",0,"NA","TTS (NR_037270)","TTS (NR_037270)",307,"NR_037270",100526555,null,"NR_037270","ENSMUSG00000104741","Mir3087","mir-3087|mmu-mir-3087","microRNA 3087","ncRNA"]
[2315,"chr4",107801814,107804006,"+",0,"NA","intron (NR_033496, intron 1 of 20)","CpG",651,"NM_001080926",16975,"Mm.442134","NM_053073","ENSMUSG00000028613","Lrp8","4932703M08Rik|AA921429|AI848122|ApoER2|Lr8b","low density lipoprotein receptor-related protein 8, apolipoprotein e receptor","protein-coding"]
[632,"chr11",103219245,103220344,"+",0,"NA","TTS (NM_016896)","TTS (NM_016896)",-1362,"NM_177801",328019,"Mm.189646","NM_177801","ENSMUSG00000044787","Spata32","4933400C05Rik|VAD1.2","spermatogenesis associated 32","protein-coding"]
[2357,"chr4",128883360,128884709,"+",0,"NA","promoter-TSS (NM_178110)","promoter-TSS (NM_178110)",-106,"NM_178110",67525,"Mm.30653","NM_178110","ENSMUSG00000041000","Trim62","6330414G21Rik|AI450348|Dear1","tripartite motif-containing 62","protein-coding"]
[394,"chr11",20631922,20632517,"+",0,"NA","5' UTR (NM_001038625, exon 1 of 2)","5' UTR (NM_001038625, exon 1 of 2)",242,"NM_001038625",58172,"Mm.339676","NM_021372","ENSMUSG00000049800","Sertad2","AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127","SERTA domain containing 2","protein-coding"]
[1371,"chr17",24234193,24235047,"+",0,"NA","promoter-TSS (NR_039596)","promoter-TSS (NR_039596)",-16,"NR_039596",100628603,null,"NR_039596","ENSMUSG00000093270","Mir5134","mir-5134|mmu-mir-5134|mu-mir-5134","microRNA 5134","ncRNA"]
[2484,"chr5",28316607,28317701,"+",0,"NA","promoter-TSS (NM_028234)","promoter-TSS (NM_028234)",-35,"NM_028234",381626,"Mm.304075","NM_028234","ENSMUSG00000048271","Rbm33","3200001K10Rik|6430512A10Rik|AA386890|Prr8","RNA binding motif protein 33","protein-coding"]
[2257,"chr4",43561921,43562777,"+",0,"NA","promoter-TSS (NM_013497)","promoter-TSS (NM_013497)",234,"NM_011602",21894,"Mm.208601","NM_011602","ENSMUSG00000028465","Tln1","Tln","talin 1","protein-coding"]
[610,"chr11",100574848,100575499,"+",0,"NA","promoter-TSS (NM_001146318)","promoter-TSS (NM_001146318)",234,"NM_009923",12799,"Mm.15711","NM_009923","ENSMUSG00000006782","Cnp","CNPase|Cnp-1|Cnp1","2',3'-cyclic nucleotide 3' phosphodiesterase","protein-coding"]
[514,"chr11",75347948,75348973,"+",0,"NA","promoter-TSS (NM_001102611)","promoter-TSS (NM_001102611)",27,"NM_001102611",319822,"Mm.340377","NM_177009","ENSMUSG00000018809","Smyd4","G430029E23Rik","SET and MYND domain containing 4","protein-coding"]
[2659,"chr5",130448341,130449519,"+",0,"NA","5' UTR (NM_021371, exon 1 of 6)","5' UTR (NM_021371, exon 1 of 6)",138,"NM_021371",140904,"Mm.40875","NM_021371","ENSMUSG00000060371","Caln1","9630012C17Rik|Cabp8|MNCb-0849","calneuron 1","protein-coding"]
[2444,"chr4",153974941,153975694,"+",0,"NA","promoter-TSS (NM_177673)","promoter-TSS (NM_177673)",-236,"NM_007859",13368,"Mm.388918","NM_007859","ENSMUSG00000029027","Dffb","40kDa|5730477D02Rik|CAD|CPAN|DFF40|Didff","DNA fragmentation factor, beta subunit","protein-coding"]
[725,"chr12",8947654,8948380,"+",0,"NA","promoter-TSS (NM_010770)","promoter-TSS (NM_010770)",88,"NM_010770",17182,"Mm.42226","NM_010770","ENSMUSG00000020583","Matn3","AV009181","matrilin 3","protein-coding"]
[513,"chr11",74649173,74650199,"+",0,"NA","exon (NM_001081158, exon 1 of 26)","exon (NM_001081158, exon 1 of 26)",191,"NM_001081158",74148,"Mm.214574","NM_001081158","ENSMUSG00000020741","Cluh","1300001I01Rik|Kiaa0664|mKIAA0664","clustered mitochondria (cluA/CLU1) homolog","protein-coding"]
[50,"chr1",64532001,64532909,"+",0,"NA","promoter-TSS (NM_009952)","promoter-TSS (NM_009952)",-349,"NM_133828",12912,"Mm.422634","NM_009952","ENSMUSG00000025958","Creb1","2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1","cAMP responsive element binding protein 1","protein-coding"]
[2645,"chr5",124862498,124863718,"+",0,"NA","promoter-TSS (NM_144819)","promoter-TSS (NM_144819)",403,"NM_001081750",269704,"Mm.138617","NM_001081750","ENSMUSG00000079215","Zfp664","AW060232|D930038J03Rik|ZFOC1|Znf664","zinc finger protein 664","protein-coding"]
[1519,"chr17",87107598,87108325,"+",0,"NA","5' UTR (NM_019654, exon 1 of 3)","5' UTR (NM_019654, exon 1 of 3)",282,"NM_019654",56468,"Mm.126885","NM_019654","ENSMUSG00000037104","Socs5","1810018L08Rik|Cish5|mKIAA0671","suppressor of cytokine signaling 5","protein-coding"]
[1994,"chr2",151542365,151543259,"+",0,"NA","intron (NM_008019, intron 1 of 4)","CpG",329,"NM_001302078",14225,"Mm.278458","NM_008019","ENSMUSG00000032966","Fkbp1a","FKBP12|Fkbp|Fkbp1","FK506 binding protein 1a","protein-coding"]
[3252,"chr8",107150382,107150893,"+",0,"NA","promoter-TSS (NM_025558)","promoter-TSS (NM_025558)",-24,"NM_025558",66427,"Mm.20242","NM_025558","ENSMUSG00000031924","Cyb5b","1810044O22Rik|AU015618|Cyb5m","cytochrome b5 type B","protein-coding"]
[2633,"chr5",123171599,123172343,"+",0,"NA","3' UTR (NM_008277, exon 14 of 14)","3' UTR (NM_008277, exon 14 of 14)",10715,"NM_008277",15445,"Mm.439709","NM_008277","ENSMUSG00000029445","Hpd","Fla|Flp|Hppd|Laf","4-hydroxyphenylpyruvic acid dioxygenase","protein-coding"]
[3173,"chr8",71371199,71371821,"+",0,"NA","non-coding (NR_122030, exon 1 of 3)","non-coding (NR_122030, exon 1 of 3)",212,"NM_001293800",77090,"Mm.440170","NM_029865","ENSMUSG00000002396","Ocel1","9430098E02Rik|AI326022|AI593544","occludin/ELL domain containing 1","protein-coding"]
[797,"chr12",99563308,99564023,"+",0,"NA","Intergenic","CpG",64309,"NR_045288",73457,"Mm.383439","NR_045288","ENSMUSG00000100211","1700064M15Rik","-","RIKEN cDNA 1700064M15 gene","ncRNA"]
[2459,"chr4",155962268,155963019,"+",0,"NA","exon (NM_026125, exon 1 of 8)","exon (NM_026125, exon 1 of 8)",331,"NM_026125",67389,"Mm.29140","NM_026125","ENSMUSG00000023571","Fam132a","1110035L05Rik|C1qdc2|CTRP12|alipolin","family with sequence similarity 132, member A","protein-coding"]
[2197,"chr3",133091296,133092293,"+",0,"NA","promoter-TSS (NM_026231)","promoter-TSS (NM_026231)",-54,"NM_026231",67553,"Mm.304899","NM_026231","ENSMUSG00000028018","Gstcd","4933434L15Rik","glutathione S-transferase, C-terminal domain containing","protein-coding"]
[1136,"chr15",76343156,76344522,"+",0,"NA","intron (NM_025567, intron 1 of 6)","CpG",316,"NM_025567",66445,"Mm.29196","NM_025567","ENSMUSG00000022551","Cyc1","2610002H19Rik|AA408921","cytochrome c-1","protein-coding"]
[1175,"chr15",82069931,82070704,"+",0,"NA","intron (NM_028897, intron 1 of 30)","intron (NM_028897, intron 1 of 30)",200,"NM_028897",74369,"Mm.289351","NM_028897","ENSMUSG00000068117","Mei1","4932408F18Rik|mei1","meiosis defective 1","protein-coding"]
[1236,"chr16",3884322,3885137,"+",0,"NA","5' UTR (NM_029090, exon 1 of 7)","5' UTR (NM_029090, exon 1 of 7)",110,"NM_001290689",74763,"Mm.28403","NM_029090","ENSMUSG00000005982","Naa60","1200013P24Rik|AI315146|Nat15","N(alpha)-acetyltransferase 60, NatF catalytic subunit","protein-coding"]
[1683,"chr19",8897872,8898571,"+",0,"NA","TTS (NM_176843)","TTS (NM_176843)",164,"NM_008060",14376,"Mm.3196","NM_008060","ENSMUSG00000071650","Ganab","AU042638|G2an|GluII|mKIAA0088","alpha glucosidase 2 alpha neutral subunit","protein-coding"]
[2413,"chr4",140986618,140987377,"+",0,"NA","5' UTR (NM_001164366, exon 1 of 29)","5' UTR (NM_001164366, exon 1 of 29)",124,"NM_001164366",74772,"Mm.205625","NM_029097","ENSMUSG00000036622","Atp13a2","1110012E06Rik|AA589443","ATPase type 13A2","protein-coding"]
[645,"chr11",106500931,106501685,"+",0,"NA","TTS (NR_030703)","TTS (NR_030703)",317,"NR_030703",100216537,null,"NR_030703","ENSMUSG00000065126","Snord104","-","small nucleolar RNA, C/D box 104","snoRNA"]
[1326,"chr16",58670019,58670985,"+",0,"NA","exon (NM_007757, exon 1 of 7)","exon (NM_007757, exon 1 of 7)",294,"NM_007757",12892,"Mm.291519","NM_007757","ENSMUSG00000022742","Cpox","CPX|Cpo|HCP|cac|nct","coproporphyrinogen oxidase","protein-coding"]
[2566,"chr5",101764574,101765832,"+",0,"NA","promoter-TSS (NM_173370)","promoter-TSS (NM_173370)",73,"NM_173370",74596,"Mm.46764","NM_173370","ENSMUSG00000029330","Cds1","4833409J18Rik|AI314024|AW125888","CDP-diacylglycerol synthase 1","protein-coding"]
[1382,"chr17",24719598,24720323,"+",0,"NA","promoter-TSS (NR_027900)","promoter-TSS (NR_027900)",5,"NR_027900",73474,"Mm.443320","NR_027900","ENSMUSG00000090101","Snhg9","1700072N11Rik","small nucleolar RNA host gene 9","ncRNA"]
[1176,"chr15",82127661,82128266,"+",0,"NA","promoter-TSS (NM_172428)","promoter-TSS (NM_172428)",41,"NM_172428",76457,"Mm.440373","NM_172428","ENSMUSG00000068114","Ccdc134","2310042L06Rik|AW208859","coiled-coil domain containing 134","protein-coding"]
[1452,"chr17",35121158,35122127,"+",0,"NA","promoter-TSS (NM_009975)","promoter-TSS (NM_009975)",146,"NM_001128597",81845,"Mm.7405","NM_032460","ENSMUSG00000092417","Gpank1","Bat-4|Bat4|D17H6S54E|G5","G patch domain and ankyrin repeats 1","protein-coding"]
[2881,"chr7",19075923,19076989,"+",0,"NA","exon (NM_010058, exon 1 of 5)","exon (NM_010058, exon 1 of 5)",256,"NM_010058",13401,"Mm.2852","NM_010058","ENSMUSG00000030410","Dmwd","DMR-N9|Dm9","dystrophia myotonica-containing WD repeat motif","protein-coding"]
[2384,"chr4",134510837,134511451,"+",0,"NA","TTS (NM_027995)","TTS (NM_027995)",145,"NM_001081099",69885,"Mm.141592","NM_001081099","ENSMUSG00000078521","Aunip","2610002D18Rik|Clhc1","aurora kinase A and ninein interacting protein","protein-coding"]
[1039,"chr14",62555543,62556124,"+",0,"NA","promoter-TSS (NM_001243857)","promoter-TSS (NM_001243857)",96,"NM_001243857",629059,"Mm.291864","NM_001243857","ENSMUSG00000035184","Fam124a","EG629059","family with sequence similarity 124, member A","protein-coding"]
[1815,"chr2",26910134,26911057,"+",0,"NA","promoter-TSS (NM_013721)","promoter-TSS (NM_013721)",47,"NM_011513",20933,"Mm.397932","NM_011513","ENSMUSG00000015776","Med22","AW212655|AW558812|Surf-5|Surf5","mediator complex subunit 22","protein-coding"]
[2637,"chr5",123930337,123930997,"+",0,"NA","promoter-TSS (NM_001134767)","promoter-TSS (NM_001134767)",-22,"NM_001134767",208908,"Mm.243679","NM_001134767","ENSMUSG00000061882","Ccdc62","AI661708|Gm150","coiled-coil domain containing 62","protein-coding"]
[1005,"chr14",33923136,33924282,"+",0,"NA","5' UTR (NM_145741, exon 1 of 3)","5' UTR (NM_145741, exon 1 of 3)",122,"NM_145741",14560,"Mm.432071","NM_145741","ENSMUSG00000021943","Gdf10","Bmp3b","growth differentiation factor 10","protein-coding"]
[28,"chr1",43445394,43446505,"+",0,"NA","5' UTR (NM_010879, exon 1 of 5)","5' UTR (NM_010879, exon 1 of 5)",198,"NM_010879",17974,"Mm.389903","NM_010879","ENSMUSG00000066877","Nck2","4833426I10Rik|Grb4|NCKbeta|Nck-2","non-catalytic region of tyrosine kinase adaptor protein 2","protein-coding"]
[2089,"chr3",27938315,27939333,"+",0,"NA","intron (NM_001164056, intron 1 of 26)","CpG",144,"NM_001164056",18805,"Mm.212039","NM_008875","ENSMUSG00000027695","Pld1","AA536939|C85393|Pld1a|Pld1b","phospholipase D1","protein-coding"]
[589,"chr11",95823927,95824591,"+",0,"NA","promoter-TSS (NM_153104)","promoter-TSS (NM_153104)",-241,"NM_153104",237928,"Mm.133075","NM_153104","ENSMUSG00000050860","Phospho1","D11Moh36|Phospo1","phosphatase, orphan 1","protein-coding"]
[2087,"chr3",20057569,20058213,"+",0,"NA","promoter-TSS (NR_105047)","promoter-TSS (NR_105047)",80,"NM_009210",20585,"Mm.209650","NM_009210","ENSMUSG00000002428","Hltf","AF010600|BC057116|P113|Smarca3|Snf2l3","helicase-like transcription factor","protein-coding"]
[1337,"chr16",91011133,91011789,"+",0,"NA","promoter-TSS (NM_001164483)","promoter-TSS (NM_001164483)",-153,"NM_001164483",104015,"Mm.187079","NM_001045515","ENSMUSG00000022973","Synj1","A930006D20Rik|AA675315|mKIAA0910","synaptojanin 1","protein-coding"]
[3474,"chr9",108826294,108827177,"+",0,"NA","exon (NM_080437, exon 1 of 35)","exon (NM_080437, exon 1 of 35)",415,"NM_080437",107934,"Mm.39945","NM_080437","ENSMUSG00000023473","Celsr3","Adgrc3|Fmi1|flamingo|mKIAA0812","cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)","protein-coding"]
[215,"chr10",41518585,41520044,"+",0,"NA","promoter-TSS (NM_016898)","promoter-TSS (NM_016898)",-186,"NM_016898",53599,"Mm.269815","NM_016898","ENSMUSG00000019818","Cd164","A115|A24|AA589639|AW540279|MGC-24|MSSP","CD164 antigen","protein-coding"]
[3320,"chr9",14859866,14860559,"+",0,"NA","promoter-TSS (NM_010287)","promoter-TSS (NM_010287)",2,"NM_010287",14608,"Mm.4672","NM_010287","ENSMUSG00000031932","Gpr83","AW045253|Gir|Gpr72|RP105|RP39|RP82","G protein-coupled receptor 83","protein-coding"]
[687,"chr11",119267890,119268700,"+",0,"NA","intron (NM_008064, intron 1 of 19)","CpG",287,"NM_008064",14387,"Mm.4793","NM_008064","ENSMUSG00000025579","Gaa","E430018M07Rik","glucosidase, alpha, acid","protein-coding"]
[3101,"chr8",3676369,3677190,"+",0,"NA","intron (NM_025701, intron 1 of 1)","intron (NM_025701, intron 1 of 1)",302,"NM_025701",66682,"Mm.29090","NM_025701",null,"Trappc5","4021401A16Rik|TRS31","trafficking protein particle complex 5","protein-coding"]
[2098,"chr3",37063110,37063878,"+",0,"NA","promoter-TSS (NM_009350)","promoter-TSS (NM_009350)",-162,"NM_009350",21744,"Mm.8122","NM_009350","ENSMUSG00000027719","Adad1","Tenr","adenosine deaminase domain containing 1 (testis specific)","protein-coding"]
[2184,"chr3",109340657,109341392,"+",0,"NA","5' UTR (NM_020505, exon 1 of 27)","5' UTR (NM_020505, exon 1 of 27)",341,"NM_020505",57257,"Mm.282257","NM_020505","ENSMUSG00000033721","Vav3","A530094I06Rik|AA986410|Idd18.1","vav 3 oncogene","protein-coding"]
[150,"chr1",171328773,171329430,"+",0,"NA","promoter-TSS (NM_001128609)","promoter-TSS (NM_001128609)",-44,"NM_001128609",21945,"Mm.270139","NM_011615","ENSMUSG00000013973","Dedd","CASP8IP1|DEFT|Dedpro1|FLDED1|KE05","death effector domain-containing","protein-coding"]
[3161,"chr8",70042024,70043620,"+",0,"NA","promoter-TSS (NM_001167939)","promoter-TSS (NM_001167939)",9,"NM_027481",70616,"Mm.17665","NM_027481","ENSMUSG00000011306","Sugp1","5730496N02Rik|Sf4","SURP and G patch domain containing 1","protein-coding"]
[3018,"chr7",112953591,112955381,"+",0,"NA","exon (NM_175279, exon 1 of 1)","exon (NM_175279, exon 1 of 1)",524,"NM_175279",78748,"Mm.349943","NM_175279","ENSMUSG00000098132","Rassf10","4632411J06Rik","Ras association (RalGDS/AF-6) domain family (N-terminal) member 10","protein-coding"]
[2298,"chr4",89687962,89688854,"+",0,"NA","exon (NM_175647, exon 1 of 2)","exon (NM_175647, exon 1 of 2)",210,"NM_175647",242523,"Mm.130167","NM_175647","ENSMUSG00000043753","Dmrta1","Dmrt4","doublesex and mab-3 related transcription factor like family A1","protein-coding"]
[2336,"chr4",124714498,124715246,"+",0,"NA","promoter-TSS (NM_029157)","promoter-TSS (NM_029157)",11,"NM_029157",75062,"Mm.25779","NM_029157","ENSMUSG00000028902","Sf3a3","4930512K19Rik|60kDa","splicing factor 3a, subunit 3","protein-coding"]
[245,"chr10",67979520,67980111,"+",0,"NA","intron (NM_001081346, intron 1 of 12)","CpG",217,"NM_001081346",170799,"Mm.209844","NM_133244","ENSMUSG00000037846","Rtkn2","B130039D23Rik|Mbf|Plekhk1","rhotekin 2","protein-coding"]
[2604,"chr5",115300891,115301514,"+",0,"NA","promoter-TSS (NR_131932)","promoter-TSS (NR_131932)",82,"NR_131932",102639268,"Mm.319998","NR_131932",null,"Gm13830","OTTMUSG00000014646","predicted gene 13830","ncRNA"]
[2511,"chr5",34549172,34550224,"+",0,"NA","exon (NM_001145859, exon 1 of 13)","exon (NM_001145859, exon 1 of 13)",122,"NM_001145859",24055,"Mm.5012","NM_011893","ENSMUSG00000054520","Sh3bp2","3BP2","SH3-domain binding protein 2","protein-coding"]
[2190,"chr3",122292952,122294280,"+",0,"NA","promoter-TSS (NR_030439)","promoter-TSS (NR_030439)",87,"NR_030439",791077,null,"NR_030439","ENSMUSG00000076456","Mir760","Mirn760|mir-760|mmu-mir-760","microRNA 760","ncRNA"]
[2546,"chr5",73651013,73651887,"+",0,"NA","promoter-TSS (NM_178387)","promoter-TSS (NM_178387)",70,"NM_178387",73472,"Mm.87067","NM_178387","ENSMUSG00000029155","Spata18","1700067I02Rik","spermatogenesis associated 18","protein-coding"]
[826,"chr12",111165660,111166477,"+",0,"NA","promoter-TSS (NM_011632)","promoter-TSS (NM_011632)",-302,"NM_001286122",22031,"Mm.27431","NM_011632","ENSMUSG00000021277","Traf3","AI528849|CAP-1|CD40bp|CRAF1|LAP1|T-BAM|amn","TNF receptor-associated factor 3","protein-coding"]
[2494,"chr5",30921534,30922156,"+",0,"NA","TTS (NM_133918)","TTS (NM_133918)",286,"NM_001310524",16548,"Mm.22451","NM_008439","ENSMUSG00000029162","Khk","-","ketohexokinase","protein-coding"]
[1344,"chr16",93831941,93832853,"+",0,"NA","intron (NM_001045529, intron 1 of 16)","CpG",276,"NM_001045529",338467,"Mm.287329","NM_001045529","ENSMUSG00000039456","Morc3","1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3","microrchidia 3","protein-coding"]
[3012,"chr7",110121352,110123063,"+",0,"NA","5' UTR (NM_009516, exon 1 of 11)","5' UTR (NM_009516, exon 1 of 11)",148,"NM_009516",22390,"Mm.287173","NM_009516",null,"Wee1","Wee1A","WEE 1 homolog 1 (S. pombe)","protein-coding"]
[2666,"chr5",135632513,135633099,"+",0,"NA","exon (NM_146002, exon 1 of 4)","exon (NM_146002, exon 1 of 4)",152,"NM_146002",215160,"Mm.295438","NM_031398","ENSMUSG00000039917","Rhbdd2","0610011L13Rik|AI480532|Rhbdl7|Usmg1","rhomboid domain containing 2","protein-coding"]
[332,"chr10",95416673,95417912,"+",0,"NA","promoter-TSS (NM_007706)","promoter-TSS (NM_007706)",-83,"NR_045339",70523,"Mm.158398","NR_045338","ENSMUSG00000097766","5730420D15Rik","-","RIKEN cDNA 5730420D15 gene","ncRNA"]
[3338,"chr9",30942523,30943398,"+",0,"NA","exon (NM_013906, exon 1 of 9)","exon (NM_013906, exon 1 of 9)",397,"NM_013906",30806,"Mm.100582","NM_013906","ENSMUSG00000031994","Adamts8","METH-2|METH2","a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8","protein-coding"]
[2329,"chr4",119232290,119233914,"+",0,"NA","promoter-TSS (NM_001012400)","promoter-TSS (NM_001012400)",187,"NM_019782",56401,"Mm.27961","NM_019782","ENSMUSG00000028641","P3h1","2410024C15Rik|Gros1|Lepre1","prolyl 3-hydroxylase 1","protein-coding"]
[1099,"chr15",35371091,35371850,"+",0,"NA","promoter-TSS (NM_177151)","promoter-TSS (NM_177151)",-76,"NM_177151",666173,"Mm.309250","NM_177151","ENSMUSG00000037646","Vps13b","1810042B05Rik|2310042E16Rik|4732488H20|C330002D13Rik|C87206|Coh1|D230005K13|mKIAA0532|mKIAA5032","vacuolar protein sorting 13B (yeast)","protein-coding"]
[1965,"chr2",128125778,128126599,"+",0,"NA","5' UTR (NM_207681, exon 1 of 5)","5' UTR (NM_207681, exon 1 of 5)",150,"NM_009754",12125,"Mm.141083","NM_009754","ENSMUSG00000027381","Bcl2l11","1500006F24Rik|Bim|Bod|bcl2-L-11","BCL2-like 11 (apoptosis facilitator)","protein-coding"]
[2980,"chr7",84689474,84690510,"+",0,"NA","intron (NR_038175, intron 1 of 4)","GC_rich|Low_complexity|Low_complexity",352,"NR_038175",72495,"Mm.382914","NR_038175",null,"2610206C17Rik","-","RIKEN cDNA 2610206C17 gene","ncRNA"]
[745,"chr12",55398500,55399319,"+",0,"NA","promoter-TSS (NM_011968)","promoter-TSS (NM_011968)",84,"NM_011968",26443,"Mm.30210","NM_011968","ENSMUSG00000021024","Psma6","IOTA","proteasome (prosome, macropain) subunit, alpha type 6","protein-coding"]
[34,"chr1",55405526,55406816,"+",0,"NA","5' UTR (NM_001114663, exon 1 of 6)","5' UTR (NM_001114663, exon 1 of 6)",225,"NM_001114663",227120,"Mm.194183","NM_001114663","ENSMUSG00000038349","Plcl1","C230017K02Rik|PLC-L|PLC-L1|PLCE|PLCL|PLDL1|PRIP|PRIP-1","phospholipase C-like 1","protein-coding"]
[2653,"chr5",129583560,129585615,"+",0,"NA","intron (NM_011846, intron 1 of 9)","CpG",373,"NM_011846",23948,"Mm.42047","NM_011846",null,"Mmp17","MT4-MMP|MT4MMP|MTMMP4","matrix metallopeptidase 17","protein-coding"]
[2656,"chr5",130079221,130079950,"+",0,"NA","5' UTR (NM_001130476, exon 1 of 6)","5' UTR (NM_001130476, exon 1 of 6)",215,"NM_001130476",22021,"Mm.332720","NM_013837","ENSMUSG00000034118","Tpst1","R75054|Tango13a","protein-tyrosine sulfotransferase 1","protein-coding"]
[2548,"chr5",74195089,74196034,"+",0,"NA","exon (NM_026878, exon 1 of 4)","exon (NM_026878, exon 1 of 4)",235,"NM_026878",68939,"Mm.293316","NM_026878","ENSMUSG00000049907","Rasl11b","1190017B18Rik","RAS-like, family 11, member B","protein-coding"]
[2082,"chr2",181496782,181497516,"+",0,"NA","promoter-TSS (NM_025482)","promoter-TSS (NM_025482)",7,"NM_001291204",66314,"Mm.136648","NM_025482","ENSMUSG00000000827","Tpd52l2","2810411G23Rik|AU016537|C86069|D54","tumor protein D52-like 2","protein-coding"]
[3056,"chr7",130865583,130866659,"+",0,"NA","intron (NM_133942, intron 1 of 9)","CpG",211,"NM_133942",101476,"Mm.323554","NM_133942","ENSMUSG00000040268","Plekha1","AA960558|C920009D07Rik|TAPP1","pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1","protein-coding"]
[2613,"chr5",117976732,117977498,"+",0,"NA","intron (NM_145564, intron 1 of 11)","CpG",345,"NM_145564",231670,"Mm.21912","NM_145564","ENSMUSG00000032898","Fbxo21","2810425J22Rik|AU016673|mKIAA0875","F-box protein 21","protein-coding"]
[620,"chr11",101315726,101316898,"+",0,"NA","promoter-TSS (NM_011192)","promoter-TSS (NM_011192)",61,"NM_011192",19192,"Mm.288477","NM_011192","ENSMUSG00000078652","Psme3","AA410043|AU020960|Ki|PA28gamma|REGgamma|pa28g","proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)","protein-coding"]
[1410,"chr17",27556604,27558067,"+",0,"NA","intron (NM_001166537, intron 1 of 4)","CpG-6152",682,"NM_001166477",111241,"Mm.426212","NM_001166476","ENSMUSG00000078249","Hmga1-rs1","ENSMUSG00000041059|Hmgi-rs1","high mobility group AT-hook I, related sequence 1","protein-coding"]
[2693,"chr5",139791196,139792160,"+",0,"NA","5' UTR (NM_010757, exon 1 of 3)","5' UTR (NM_010757, exon 1 of 3)",142,"NM_010757",17135,"Mm.157313","NM_010757","ENSMUSG00000018143","Mafk","AW061068|NF-E2|Nfe2u","v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)","protein-coding"]
[1434,"chr17",32321238,32322115,"+",0,"NA","promoter-TSS (NM_019774)","promoter-TSS (NM_019774)",-438,"NR_131218",56399,"Mm.328945","NM_019774","ENSMUSG00000024045","Akap8","1200016A02Rik|AA673585|AKAP-8|AKAP95|AU015639","A kinase (PRKA) anchor protein 8","protein-coding"]
[2713,"chr5",145231365,145232219,"+",0,"NA","promoter-TSS (NM_001083958)","promoter-TSS (NM_001083958)",33,"NM_028298",72611,"Mm.206555","NM_028298","ENSMUSG00000007812","Zfp655","2700038I16Rik|9030409O18Rik|mKIAA4222","zinc finger protein 655","protein-coding"]
[2625,"chr5",122353945,122354988,"+",0,"NA","promoter-TSS (NM_144912)","promoter-TSS (NM_144912)",53,"NM_019780",56433,"Mm.216528","NM_019780","ENSMUSG00000029462","Vps29","2010015D08Rik|AW049835|PEP11","vacuolar protein sorting 29 (S. pombe)","protein-coding"]
[3400,"chr9",65032258,65033080,"+",0,"NA","intron (NM_028906, intron 1 of 20)","CpG",211,"NM_028906",74388,"Mm.202749","NM_028906","ENSMUSG00000032393","Dpp8","2310004I03Rik|4932434F09Rik|AI666706|DPP VIII","dipeptidylpeptidase 8","protein-coding"]
[3457,"chr9",107554261,107555405,"+",0,"NA","exon (NM_019713, exon 1 of 5)","exon (NM_019713, exon 1 of 5)",250,"NM_019713",56289,"Mm.12091","NM_019713","ENSMUSG00000010067","Rassf1","123F2|AA536941|AU044980|NORE2A|RDA32|REH3P21|Rassf1A|Rassf1B|Rassf1C","Ras association (RalGDS/AF-6) domain family member 1","protein-coding"]
[2471,"chr5",21185896,21186661,"+",0,"NA","promoter-TSS (NM_175437)","promoter-TSS (NM_175437)",11,"NM_175437",212167,"Mm.121705","NM_175437","ENSMUSG00000039934","Gsap","A530088I07Rik|Pion","gamma-secretase activating protein","protein-coding"]
[1547,"chr18",31804034,31804701,"+",0,"NA","intron (NM_001170970, intron 1 of 7)","CpG",310,"NM_001170966",74320,"Mm.277705","NM_028866","ENSMUSG00000024400","Wdr33","1110001N06Rik|2310011G05Rik|2810021O11Rik|8430413N20Rik|WDC146","WD repeat domain 33","protein-coding"]
[937,"chr13",93303762,93304761,"+",0,"NA","promoter-TSS (NM_147176)","promoter-TSS (NM_147176)",-234,"NM_147176",26556,"Mm.37533","NM_011982",null,"Homer1","PSD-Zip45|SYN47|Ves-1|homer-1|vesl-1","homer homolog 1 (Drosophila)","protein-coding"]
[1045,"chr14",65837242,65837985,"+",0,"NA","intron (NM_145944, intron 1 of 8)","CpG",311,"NM_145944",67179,"Mm.214576","NM_145944","ENSMUSG00000022035","Ccdc25","2610528H13Rik|NSrp70","coiled-coil domain containing 25","protein-coding"]
[1619,"chr18",82910158,82910921,"+",0,"NA","promoter-TSS (NM_183033)","promoter-TSS (NM_183033)",-340,"NM_183033",329003,"Mm.326526","NM_183033","ENSMUSG00000058881","Zfp516","C330029B10Rik|D230016L03|Zfp26l|Znf516|mKIAA0222","zinc finger protein 516","protein-coding"]
[3266,"chr8",116943227,116944108,"+",0,"NA","exon (NM_177700, exon 1 of 4)","exon (NM_177700, exon 1 of 4)",274,"NM_177700",234776,"Mm.259736","NM_177700","ENSMUSG00000047388","Atmin","Asciz|gpg6|mKIAA0431","ATM interactor","protein-coding"]
[730,"chr12",17690413,17691139,"+",0,"NA","promoter-TSS (NM_016677)","promoter-TSS (NM_016677)",-38,"NM_016677",53602,"Mm.313619","NM_016677","ENSMUSG00000071379","Hpcal1","NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3","hippocalcin-like 1","protein-coding"]
[16,"chr1",36511530,36513123,"+",0,"NA","exon (NM_053186, exon 1 of 8)","exon (NM_053186, exon 1 of 8)",450,"NM_053186",94218,"Mm.256323","NM_053186","ENSMUSG00000001138","Cnnm3","Acdp3|Clp3|mACDP3","cyclin M3","protein-coding"]
[921,"chr13",73330901,73331525,"+",0,"NA","intron (NM_053163, intron 1 of 1)","CpG",204,"NM_053163",94066,"Mm.26775","NM_053163","ENSMUSG00000021607","Mrpl36","AI646041","mitochondrial ribosomal protein L36","protein-coding"]
[2880,"chr7",16944430,16945730,"+",0,"NA","5' UTR (NM_001099636, exon 1 of 1)","5' UTR (NM_001099636, exon 1 of 1)",398,"NM_001099636",434128,"Mm.483018","NM_001099636","ENSMUSG00000070802","Pnmal2","EG434128","PNMA-like 2","protein-coding"]
[1069,"chr14",103069935,103070624,"+",0,"NA","promoter-TSS (NM_001033242)","promoter-TSS (NM_001033242)",63,"NM_001033242",211286,"Mm.295289","NM_001033242","ENSMUSG00000022125","Cln5","A730075N08Rik","ceroid-lipofuscinosis, neuronal 5","protein-coding"]
[2311,"chr4",106650955,106651746,"+",0,"NA","intron (NM_001285784, intron 1 of 1)","intron (NM_001285784, intron 1 of 1)",281,"NM_001083887",230577,"Mm.134029","NM_172272","ENSMUSG00000043572","Pars2","BC027073","prolyl-tRNA synthetase (mitochondrial)(putative)","protein-coding"]
[1224,"chr15",101223923,101224592,"+",0,"NA","promoter-TSS (NM_019518)","promoter-TSS (NM_019518)",50,"NM_019518",56149,"Mm.276573","NM_019518","ENSMUSG00000000531","Grasp","tamalin","GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein","protein-coding"]
[368,"chr10",128194615,128195340,"+",0,"NA","intron (NM_001033264, intron 1 of 17)","CpG",342,"NM_001285779",216456,"Mm.30102","NM_001033264","ENSMUSG00000044005","Gls2","A330074B06Rik|AI195532|GA|GLS|Lga","glutaminase 2 (liver, mitochondrial)","protein-coding"]
[3078,"chr7",141079756,141080618,"+",0,"NA","intron (NM_001162924, intron 2 of 13)","intron (NM_001162924, intron 2 of 13)",418,"NM_019762",56460,"Mm.350037","NM_019762","ENSMUSG00000054065","Pkp3","2310056L12Rik","plakophilin 3","protein-coding"]
[2556,"chr5",90931003,90931639,"+",0,"NA","exon (NM_026788, exon 1 of 8)","exon (NM_026788, exon 1 of 8)",125,"NM_026788",665563,"Mm.153030","NM_026788","ENSMUSG00000029376","Mthfd2l","1110019K23Rik|C630010D07Rik","methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like","protein-coding"]
[994,"chr14",30879113,30880230,"+",0,"NA","intron (NM_181390, intron 1 of 2)","intron (NM_181390, intron 1 of 2)",414,"NM_181390",66175,"Mm.220895","NM_181390","ENSMUSG00000042485","Mustn1","1110028G01Rik|Mustang","musculoskeletal, embryonic nuclear protein 1","protein-coding"]
[611,"chr11",100625824,100626452,"+",0,"NA","TTS (NM_177790)","TTS (NM_177790)",3183,"NM_028024",71966,"Mm.274734","NM_028024","ENSMUSG00000017837","Nkiras2","2410003M04Rik|4930527H08Rik|D630018G21Rik|KBRAS2","NFKB inhibitor interacting Ras-like protein 2","protein-coding"]
[1786,"chr2",18698598,18699338,"+",0,"NA","promoter-TSS (NM_001001334)","promoter-TSS (NM_001001334)",-54,"NM_001001334",381350,"Mm.330024","NM_001001334",null,"Spag6l","-","sperm associated antigen 6 like","protein-coding"]
[1849,"chr2",31974140,31974897,"+",0,"NA","promoter-TSS (NM_172268)","promoter-TSS (NM_172268)",68,"NM_172268",227720,"Mm.289686","NM_172268","ENSMUSG00000001855","Nup214","BC039282|CAN|D2H9S46E","nucleoporin 214","protein-coding"]
[849,"chr12",116405127,116405959,"+",0,"NA","promoter-TSS (NR_028421)","promoter-TSS (NR_028421)",141,"NM_133762",76044,"Mm.491196","NM_133762","ENSMUSG00000042029","Ncapg2","5830426I05Rik|Luzp5|Mtb|mCAP-G2","non-SMC condensin II complex, subunit G2","protein-coding"]
[2320,"chr4",114924889,114926192,"+",0,"NA","exon (NM_015758, exon 1 of 1)","exon (NM_015758, exon 1 of 1)",473,"NM_015758",30923,"Mm.377122","NM_015758","ENSMUSG00000044518","Foxe3","FREAC8|dyl|rct","forkhead box E3","protein-coding"]
[492,"chr11",70000478,70001092,"+",0,"NA","TTS (NM_030064)","TTS (NM_030064)",159,"NM_007888",13543,"Mm.5114","NM_007888","ENSMUSG00000020888","Dvl2","-","dishevelled 2, dsh homolog (Drosophila)","protein-coding"]
[2740,"chr6",31398659,31399518,"+",0,"NA","promoter-TSS (NR_040300)","promoter-TSS (NR_040300)",260,"NM_013791",27418,"Mm.238038","NM_013791",null,"Mkln1","A130067F06Rik|AU015903|BB154892","muskelin 1, intracellular mediator containing kelch motifs","protein-coding"]
[208,"chr10",39369665,39370432,"+",0,"NA","5' UTR (NM_001122892, exon 1 of 13)","5' UTR (NM_001122892, exon 1 of 13)",249,"NM_001122893",14360,"Mm.4848","NM_008054","ENSMUSG00000019843","Fyn","AI448320|AW552119","Fyn proto-oncogene","protein-coding"]
[2788,"chr6",85587318,85588114,"+",0,"NA","exon (NM_145223, exon 1 of 23)","exon (NM_145223, exon 1 of 23)",185,"NM_145223",236266,"Mm.246967","NM_145223","ENSMUSG00000063810","Alms1","bbb","Alstrom syndrome 1","protein-coding"]
[2440,"chr4",152274067,152274660,"+",0,"NA","promoter-TSS (NM_178406)","promoter-TSS (NM_178406)",1,"NM_178406",100129,"Mm.23235","NM_178406","ENSMUSG00000042804","Gpr153","1110065N12Rik|AI449320|PGR1","G protein-coupled receptor 153","protein-coding"]
[2140,"chr3",88536067,88537367,"+",0,"NA","promoter-TSS (NR_035434)","promoter-TSS (NR_035434)",-335,"NR_035434",100316808,null,"NR_035434","ENSMUSG00000084728","Mir1905","Mirn1905|mmu-mir-1905","microRNA 1905","ncRNA"]
[2271,"chr4",48279035,48280160,"+",0,"NA","promoter-TSS (NM_029572)","promoter-TSS (NM_029572)",-8,"NM_029572",76299,"Mm.317701","NM_029572","ENSMUSG00000028343","Erp44","1110001E24Rik|AI849526|AL033348|Txndc4","endoplasmic reticulum protein 44","protein-coding"]
[1523,"chr17",87974759,87975728,"+",0,"NA","exon (NM_010830, exon 1 of 10)","exon (NM_010830, exon 1 of 10)",193,"NM_010830",17688,"Mm.18210","NM_010830","ENSMUSG00000005370","Msh6","AU044881|AW550279|GTBP|Gtmbp","mutS homolog 6 (E. coli)","protein-coding"]
[3225,"chr8",95081070,95081816,"+",0,"NA","intron (NM_028805, intron 1 of 19)","CpG",242,"NM_028805",74187,"Mm.28382","NM_028805","ENSMUSG00000031787","Katnb1","2410003J24Rik|KAT","katanin p80 (WD40-containing) subunit B 1","protein-coding"]
[93,"chr1",93753767,93755469,"+",0,"NA","promoter-TSS (NM_174874)","promoter-TSS (NM_174874)",220,"NM_025920",67026,"Mm.272356","NM_025920","ENSMUSG00000026279","Thap4","2010320B01Rik","THAP domain containing 4","protein-coding"]
[3055,"chr7",130692432,130693137,"+",0,"NA","5' UTR (NM_021314, exon 1 of 18)","5' UTR (NM_021314, exon 1 of 18)",228,"NM_021314",57752,"Mm.86322","NM_021314","ENSMUSG00000030852","Tacc2","mKIAA4180","transforming, acidic coiled-coil containing protein 2","protein-coding"]
[2773,"chr6",71493666,71494886,"+",0,"NA","5' UTR (NM_001308303, exon 1 of 4)","5' UTR (NM_001308303, exon 1 of 4)",399,"NM_001308303",22644,"Mm.422969","NM_009543","ENSMUSG00000052656","Rnf103","AW146237|AW212918|Zfp103|kf-1","ring finger protein 103","protein-coding"]
[292,"chr10",80583309,80585682,"+",0,"NA","intron (NM_145421, intron 3 of 4)","intron (NM_145421, intron 3 of 4)",5846,"NM_145421",216169,"Mm.29802","NM_145421","ENSMUSG00000003346","Abhd17a","1700013O15Rik|BC005632|D10Bwg1364e|Fam108a","abhydrolase domain containing 17A","protein-coding"]
[2445,"chr4",154011460,154012975,"+",0,"NA","exon (NM_201226, exon 1 of 7)","exon (NM_201226, exon 1 of 7)",414,"NM_201226",72946,"Mm.260690","NM_201226","ENSMUSG00000029028","Lrrc47","2900010D03Rik|AA960559|mKIAA1185","leucine rich repeat containing 47","protein-coding"]
[291,"chr10",80392234,80393370,"+",0,"NA","3' UTR (NM_013595, exon 7 of 7)","3' UTR (NM_013595, exon 7 of 7)",-5151,"NM_198615",237400,"Mm.268389","NM_198615","ENSMUSG00000048696","Mex3d","BC059858|Rkhd1","mex3 homolog D (C. elegans)","protein-coding"]
[3071,"chr7",139943702,139945054,"+",0,"NA","exon (NM_009482, exon 1 of 2)","exon (NM_009482, exon 1 of 2)",522,"NM_009482",22286,"Mm.10205","NM_009482","ENSMUSG00000047751","Utf1","AI505934","undifferentiated embryonic cell transcription factor 1","protein-coding"]
[3040,"chr7",126928691,126929330,"+",0,"NA","5' UTR (NM_172747, exon 1 of 6)","5' UTR (NM_172747, exon 1 of 6)",131,"NM_172747",233877,"Mm.245897","NM_172747","ENSMUSG00000030685","Kctd13","1500003N18Rik|AV259508|PDIP1alpha|Pdip1|Poldip1","potassium channel tetramerisation domain containing 13","protein-coding"]
[2429,"chr4",150854786,150855665,"+",0,"NA","promoter-TSS (NR_040649)","promoter-TSS (NR_040649)",134,"NM_133753",74155,"Mm.318841","NM_133753","ENSMUSG00000028967","Errfi1","1300002F13Rik|AI788755|Mig-6|Mig6|RALT","ERBB receptor feedback inhibitor 1","protein-coding"]
[374,"chr11",3514549,3515202,"+",0,"NA","5' UTR (NM_053267, exon 1 of 5)","5' UTR (NM_053267, exon 1 of 5)",173,"NM_053267",114679,"Mm.34046","NM_053267","ENSMUSG00000075702","Selm","1500040L08Rik|A230103K18|Sepm","selenoprotein M","protein-coding"]
[3272,"chr8",119436967,119437805,"+",0,"NA","intron (NM_027950, intron 1 of 5)","intron (NM_027950, intron 1 of 5)",224,"NM_027950",71839,"Mm.272357","NM_027950","ENSMUSG00000074063","Osgin1","1700012B18Rik|Okl38","oxidative stress induced growth inhibitor 1","protein-coding"]
[2790,"chr6",86194947,86196009,"+",0,"NA","5' UTR (NM_031199, exon 1 of 6)","5' UTR (NM_031199, exon 1 of 6)",251,"NM_031199",21802,"Mm.137222","NM_031199","ENSMUSG00000029999","Tgfa","wa-1|wa1","transforming growth factor alpha","protein-coding"]
[114,"chr1",133046003,133046747,"+",0,"NA","5' UTR (NM_001099276, exon 1 of 33)","5' UTR (NM_001099276, exon 1 of 33)",363,"NM_001099276",240752,"Mm.387308","NM_001099276","ENSMUSG00000026447","Pik3c2b","C330011J12Rik|Gm199|PI3K-C2beta|PI3KC2beta","phosphoinositide-3-kinase, class 2, beta polypeptide","protein-coding"]
[429,"chr11",52231625,52232587,"+",0,"NA","5' UTR (NM_011543, exon 1 of 6)","5' UTR (NM_011543, exon 1 of 6)",111,"NM_011543",21402,"Mm.42944","NM_011543","ENSMUSG00000036309","Skp1a","15kDa|2610043E24Rik|2610206H23Rik|EMC19|OCP-II|OCP2|SKP1|Tceb1l|p19A|p19Skp1","S-phase kinase-associated protein 1A","protein-coding"]
[1306,"chr16",33251219,33251963,"+",0,"NA","exon (NM_080557, exon 1 of 14)","exon (NM_080557, exon 1 of 14)",135,"NM_080557",69150,"Mm.28196","NM_080557","ENSMUSG00000022808","Snx4","1810036H14Rik|AI037066","sorting nexin 4","protein-coding"]
[1939,"chr2",118745457,118746974,"+",0,"NA","exon (NM_001301269, exon 1 of 1)","exon (NM_001301269, exon 1 of 1)",457,"NM_001301269",100043272,"Mm.398072","NM_001301269",null,"Inafm2","5430417L22Rik|ENSMUSG00000074918","InaF motif containing 2","protein-coding"]
[3097,"chr7",144896514,144897479,"+",0,"NA","intron (NM_008003, intron 1 of 2)","CpG",464,"NM_008003",14170,"Mm.3904","NM_008003","ENSMUSG00000031073","Fgf15","FGF19","fibroblast growth factor 15","protein-coding"]
[1328,"chr16",65814795,65816049,"+",0,"NA","promoter-TSS (NM_028572)","promoter-TSS (NM_028572)",-211,"NM_028572",73569,"Mm.25670","NM_028572","ENSMUSG00000091243","Vgll3","1700110N18Rik|4832416J22|C80713|Vgl-3|Vito-2","vestigial like 3 (Drosophila)","protein-coding"]
[73,"chr1",86703348,86704220,"+",0,"NA","promoter-TSS (NM_001172157)","promoter-TSS (NM_001172157)",-20,"NM_153530",208718,"Mm.389152","NM_153530","ENSMUSG00000053333","Dis3l2","4930429A22Rik|8030493P09Rik","DIS3 mitotic control homolog (S. cerevisiae)-like 2","protein-coding"]
[409,"chr11",35120998,35121620,"+",0,"NA","promoter-TSS (NM_011412)","promoter-TSS (NM_011412)",-147,"NM_011412",20564,"Mm.478604","NM_011412","ENSMUSG00000056427","Slit3","Slil2|Slit1|b2b2362.1Clo","slit homolog 3 (Drosophila)","protein-coding"]
[1091,"chr15",25622135,25623537,"+",0,"NA","5' UTR (NM_019472, exon 1 of 41)","5' UTR (NM_019472, exon 1 of 41)",286,"NM_019472",17909,"Mm.60590","NM_019472","ENSMUSG00000022272","Myo10","AW048724|D15Ertd600e|mKIAA0799","myosin X","protein-coding"]
[3335,"chr9",23222377,23223744,"+",0,"NA","promoter-TSS (NM_028472)","promoter-TSS (NM_028472)",-16,"NM_028472",73230,"Mm.335020","NM_028472","ENSMUSG00000031963","Bmper","3110056H04Rik|CV-2|Crim3|Cv2","BMP-binding endothelial regulator","protein-coding"]
[67,"chr1",82839278,82839940,"+",0,"NA","5' UTR (NM_010472, exon 1 of 13)","5' UTR (NM_010472, exon 1 of 13)",149,"NM_010472",15463,"Mm.392569","NM_010472","ENSMUSG00000026159","Agfg1","AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip","ArfGAP with FG repeats 1","protein-coding"]
[812,"chr12",105453574,105454538,"+",0,"NA","5' UTR (NM_001252508, exon 1 of 2)","5' UTR (NM_001252508, exon 1 of 2)",200,"NM_001252508",268595,"Mm.2388","NM_001252508","ENSMUSG00000094910","D430019H16Rik","AI852661","RIKEN cDNA D430019H16 gene","protein-coding"]
[241,"chr10",62980169,62980860,"+",0,"NA","intron (NM_027425, intron 1 of 17)","CpG",291,"NM_027425",70432,"Mm.234587","NM_027425","ENSMUSG00000020070","Rufy2","2610111M19Rik|AI844453|Denn|LZ-FYVE|ZFYVE13","RUN and FYVE domain-containing 2","protein-coding"]
[1958,"chr2",125858475,125859109,"+",0,"NA","promoter-TSS (NM_175154)","promoter-TSS (NM_175154)",290,"NM_009939",12848,"Mm.3596","NM_009939","ENSMUSG00000027206","Cops2","AI315723|C85265|Csn2|Sgn2|TRIP-15|Trip15","COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)","protein-coding"]
[1962,"chr2",127269581,127271022,"+",0,"NA","promoter-TSS (NM_139308)","promoter-TSS (NM_139308)",72,"NM_139308",99138,"Mm.41271","NM_139308","ENSMUSG00000027367","Stard7","AI852671|AL022671|AW544915","START domain containing 7","protein-coding"]
[3133,"chr8",27085312,27086108,"+",0,"NA","promoter-TSS (NM_054044)","promoter-TSS (NM_054044)",-131,"NM_054044",78560,"Mm.87046","NM_054044","ENSMUSG00000031486","Adgra2","8430414O08Rik|9530074E10Rik|Gpr124|Tem5|mKIAA1531","adhesion G protein-coupled receptor A2","protein-coding"]
[2561,"chr5",93092874,93094144,"+",0,"NA","promoter-TSS (NM_001009818)","promoter-TSS (NM_001009818)",93,"NM_001310671",52398,"Mm.394184","NM_001009818","ENSMUSG00000058013","2011-09-01","6230410I01Rik|AW548875|D5Ertd606e","septin 11","protein-coding"]
[489,"chr11",69913659,69914687,"+",0,"NA","promoter-TSS (NM_019726)","promoter-TSS (NM_019726)",-19,"NM_019726",56310,"Mm.477738","NM_019726","ENSMUSG00000023170","Gps2","AI505953","G protein pathway suppressor 2","protein-coding"]
[585,"chr11",94489106,94489606,"+",0,"NA","TTS (NM_027984)","TTS (NM_027984)",-4046,"NM_144827",217116,"Mm.156123","NM_144827","ENSMUSG00000020867","Spata20","Tisp78","spermatogenesis associated 20","protein-coding"]
[327,"chr10",94035981,94036524,"+",0,"NA","promoter-TSS (NM_001304720)","promoter-TSS (NM_001304720)",251,"NM_053072",13998,"Mm.269596","NM_053072","ENSMUSG00000020021","Fgd6","AA123052|Etohd4|ZFYVE24","FYVE, RhoGEF and PH domain containing 6","protein-coding"]
[1392,"chr17",25239700,25240767,"+",0,"NA","promoter-TSS (NM_001163718)","promoter-TSS (NM_001163718)",63,"NM_026676",68327,"Mm.180687","NM_026676","ENSMUSG00000015126","Tsr3","0610007P22Rik|1110014B11Rik|AL022759","TSR3 20S rRNA accumulation","protein-coding"]
[1970,"chr2",129198282,129199175,"+",0,"NA","promoter-TSS (NM_015747)","promoter-TSS (NM_015747)",-45,"NM_015747",20515,"Mm.272675","NM_015747","ENSMUSG00000027397","Slc20a1","AI607883|Glvr-1|Glvr1","solute carrier family 20, member 1","protein-coding"]
[2391,"chr4",136285828,136286592,"+",0,"NA","5' UTR (NM_009557, exon 1 of 3)","5' UTR (NM_009557, exon 1 of 3)",141,"NM_009557",22704,"Mm.1504","NM_009557","ENSMUSG00000051351","Zfp46","AI426962|Mlz-4|Zfp-46|Znf436","zinc finger protein 46","protein-coding"]
[1080,"chr15",4026248,4027590,"+",0,"NA","non-coding (NR_028266, exon 1 of 2)","non-coding (NR_028266, exon 1 of 2)",487,"NR_028266",414066,"Mm.394461","NR_028266",null,"BC037032","-","cDNA Sequence BC037032","ncRNA"]
[1281,"chr16",18876293,18877888,"+",0,"NA","promoter-TSS (NM_010922)","promoter-TSS (NM_010922)",340,"NM_010435",15260,"Mm.15694","NM_010435","ENSMUSG00000022702","Hira","AA138857|D16Ertd95e|Gm15797|N28177|OTTMUSG00000026264|Tuple1","histone cell cycle regulation defective homolog A (S. cerevisiae)","protein-coding"]
[2819,"chr6",113326623,113327402,"+",0,"NA","promoter-TSS (NM_010957)","promoter-TSS (NM_010957)",36,"NM_010957",18294,"Mm.43612","NM_010957","ENSMUSG00000030271","Ogg1","Mmh","8-oxoguanine DNA-glycosylase 1","protein-coding"]
[732,"chr12",24830788,24831653,"+",0,"NA","promoter-TSS (NM_026037)","promoter-TSS (NM_026037)",-379,"NM_026037",67216,"Mm.167671","NM_026037","ENSMUSG00000020646","Mboat2","2810049G06Rik|AU022889|AW547221|LPCAT4|Moact2|Oact2","membrane bound O-acyltransferase domain containing 2","protein-coding"]
[1864,"chr2",34406675,34407315,"+",0,"NA","5' UTR (NM_177345, exon 1 of 12)","5' UTR (NM_177345, exon 1 of 12)",144,"NM_001290626",227743,"Mm.270866","NM_177345","ENSMUSG00000038696","Mapkap1","AI591529|D230039K05Rik|Sin1","mitogen-activated protein kinase associated protein 1","protein-coding"]
[3214,"chr8",92357666,92358426,"+",0,"NA","5' UTR (NM_018826, exon 1 of 3)","5' UTR (NM_018826, exon 1 of 3)",250,"NM_018826",54352,"Mm.101153","NM_018826","ENSMUSG00000031737","Irx5","-","Iroquois related homeobox 5 (Drosophila)","protein-coding"]
[3491,"chr9",119052184,119053434,"+",0,"NA","promoter-TSS (NM_001164567)","promoter-TSS (NM_001164567)",31,"NM_001164567",22351,"Mm.83817","NM_011700","ENSMUSG00000038775","Vill","Villp","villin-like","protein-coding"]
[2233,"chr4",13742901,13743840,"+",0,"NA","promoter-TSS (NM_001111026)","promoter-TSS (NM_001111026)",68,"NM_001111026",12395,"Mm.4909","NM_009822","ENSMUSG00000006586","Runx1t1","Cbfa2t1h|ETO|MTG8","runt-related transcription factor 1; translocated to, 1 (cyclin D-related)","protein-coding"]
[1603,"chr18",68299786,68300605,"+",0,"NA","promoter-TSS (NM_026440)","promoter-TSS (NM_026440)",138,"NM_153794",108654,"Mm.125857","NM_153794","ENSMUSG00000038121","Fam210a","4933403F05Rik|AA987140|AV134576|AW491926","family with sequence similarity 210, member A","protein-coding"]
[622,"chr11",101732602,101733497,"+",0,"NA","promoter-TSS (NM_144831)","promoter-TSS (NM_144831)",93,"NM_144831",217207,"Mm.28186","NM_144831","ENSMUSG00000034931","Dhx8","Ddx8|mDEAH6|mKIAA4096","DEAH (Asp-Glu-Ala-His) box polypeptide 8","protein-coding"]
[1881,"chr2",52072727,52073676,"+",0,"NA","exon (NM_175238, exon 2 of 36)","exon (NM_175238, exon 2 of 36)",364,"NM_175238",51869,"Mm.254530","NM_175238","ENSMUSG00000036202","Rif1","5730435J01Rik|6530403D07Rik|AU016181|AW549474|D2Ertd145e","Rap1 interacting factor 1 homolog (yeast)","protein-coding"]
[970,"chr14",16249174,16249924,"+",0,"NA","5' UTR (NM_027695, exon 1 of 3)","5' UTR (NM_027695, exon 1 of 3)",235,"NM_021504",59007,"Mm.258381","NM_021504","ENSMUSG00000021785","Ngly1","1110002C09Rik|PNGase|Png1","N-glycanase 1","protein-coding"]
[2381,"chr4",134126767,134129290,"+",0,"NA","exon (NM_080559, exon 2 of 3)","exon (NM_080559, exon 2 of 3)",725,"NM_080559",73723,"Mm.22240","NM_080559","ENSMUSG00000028843","Sh3bgrl3","1110004L05Rik|AU022188","SH3 domain binding glutamic acid-rich protein-like 3","protein-coding"]
[2771,"chr6",67266673,67267972,"+",0,"NA","exon (NM_001113566, exon 1 of 8)","exon (NM_001113566, exon 1 of 8)",343,"NM_025814",66870,"Mm.240490","NM_025814",null,"Serbp1","1200009K13Rik|9330147J08Rik|AL022786|Pairbp1","serpine1 mRNA binding protein 1","protein-coding"]
[2375,"chr4",133010987,133011897,"+",0,"NA","promoter-TSS (NM_146155)","promoter-TSS (NM_146155)",-64,"NM_146155",230793,"Mm.31816","NM_146155","ENSMUSG00000037692","Ahdc1","D030015G18Rik","AT hook, DNA binding motif, containing 1","protein-coding"]
[24,"chr1",40266433,40267006,"+",0,"NA","5' UTR (NM_001123382, exon 1 of 11)","5' UTR (NM_001123382, exon 1 of 11)",133,"NM_001123382",16177,"Mm.896","NM_008362","ENSMUSG00000026072","Il1r1","CD121a|CD121b|IL-1R1|IL-iR|Il1r-1","interleukin 1 receptor, type I","protein-coding"]
[1416,"chr17",28313219,28314120,"+",0,"NA","non-coding (NR_028297, exon 1 of 10)","non-coding (NR_028297, exon 1 of 10)",139,"NM_001163820",72775,"Mm.201859","NM_028348","ENSMUSG00000007570","Fance","2810451D06Rik|AI415634|AW209126","Fanconi anemia, complementation group E","protein-coding"]
[2759,"chr6",52313408,52314368,"+",0,"NA","exon (NM_007966, exon 1 of 3)","exon (NM_007966, exon 1 of 3)",390,"NM_007966",14028,"Mm.389754","NM_007966","ENSMUSG00000005503","Evx1","Evx-1","even skipped homeotic gene 1 homolog","protein-coding"]
[2256,"chr4",43493296,43493828,"+",0,"NA","promoter-TSS (NR_001460)","promoter-TSS (NR_001460)",197,"NM_001037913",622404,"Mm.289109","NM_001037913","ENSMUSG00000028461","Ccdc107","-","coiled-coil domain containing 107","protein-coding"]
[3321,"chr9",15305907,15306637,"+",0,"NA","promoter-TSS (NM_027261)","promoter-TSS (NM_027261)",58,"NM_027261",75316,"Mm.354115","NM_026541","ENSMUSG00000031939","Taf1d","2810003M17Rik|4930553M18Rik|5930426I11Rik|Josd3|TAF(I)41|TAFI41","TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D","protein-coding"]
[2049,"chr2",166905864,166906808,"+",0,"NA","intron (NM_023565, intron 1 of 24)","CpG",240,"NM_023565",110750,"Mm.22417","NM_023565","ENSMUSG00000002718","Cse1l","2610100P18Rik|AA407533|Capts|Cas|Xpo2","chromosome segregation 1-like (S. cerevisiae)","protein-coding"]
[1658,"chr19",6264207,6264917,"+",0,"NA","promoter-TSS (NR_029720)","promoter-TSS (NR_029720)",-81,"NR_029830",723957,null,"NR_029830","ENSMUSG00000065582","Mir194-2","Mirn194-2|mir-194-2","microRNA 194-2","ncRNA"]
[3197,"chr8",84704026,84704754,"+",0,"NA","TTS (NM_010906)","TTS (NM_010906)",2933,"NM_008535",17095,"Mm.4925","NM_008535","ENSMUSG00000034041","Lyl1","Lyl-1|bHLHa18","lymphoblastomic leukemia 1","protein-coding"]
[104,"chr1",125676399,125677434,"+",0,"NA","promoter-TSS (NM_027677)","promoter-TSS (NM_027677)",-80,"NM_027677",71111,"Mm.32727","NM_027677","ENSMUSG00000026343","Gpr39","4933415E13Rik","G protein-coupled receptor 39","protein-coding"]
[2057,"chr2",167980186,167980839,"+",0,"NA","TTS (NM_001080708)","TTS (NM_001080708)",30081,"NM_001080708",69553,"Mm.68454","NM_001080708","ENSMUSG00000074577","Fam65c","2310033K02Rik|Gm124","family with sequence similarity 65, member C","protein-coding"]
[1558,"chr18",35562054,35563064,"+",0,"NA","intron (NM_010771, intron 1 of 14)","CpG",401,"NM_010771",17184,"Mm.215034","NM_010771",null,"Matr3","1110061A14Rik|2810017I02Rik|AI841759|AW555618|D030046F20Rik|mKIAA0723","matrin 3","protein-coding"]
[3370,"chr9",51765341,51766376,"+",0,"NA","intron (NM_175535, intron 1 of 14)","CpG",506,"NM_175535",244867,"Mm.400352","NM_175535","ENSMUSG00000053199","Arhgap20","6530403F17Rik|A530023E23Rik|RARhoGAP|mKIAA1391","Rho GTPase activating protein 20","protein-coding"]
[3493,"chr9",119937173,119937976,"+",0,"NA","promoter-TSS (NM_028976)","promoter-TSS (NM_028976)",-16,"NM_028976",74498,"Mm.104789","NM_028976","ENSMUSG00000032513","Gorasp1","5430411C10Rik|GOLPH5|GRASP65|P65","golgi reassembly stacking protein 1","protein-coding"]
[1237,"chr16",4639775,4640539,"+",0,"NA","intron (NM_139307, intron 1 of 1)","CpG",212,"NM_139307",246154,"Mm.482140","NM_139307","ENSMUSG00000039646","Vasn","2610528G05Rik|Atia|Slitl2","vasorin","protein-coding"]
[1635,"chr19",4855066,4855841,"+",0,"NA","exon (NM_019861, exon 1 of 14)","exon (NM_019861, exon 1 of 14)",324,"NM_019861",56464,"Mm.29561","NM_019861","ENSMUSG00000083282","Ctsf","AI481912","cathepsin F","protein-coding"]
[2361,"chr4",129600446,129601151,"+",0,"NA","promoter-TSS (NM_018799)","promoter-TSS (NM_018799)",91,"NM_029748",76799,"Mm.293096","NM_029748",null,"Tmem234","1500002D11Rik|2510006D16Rik|4933407D05Rik","transmembrane protein 234","protein-coding"]
[2175,"chr3",104864418,104865547,"+",0,"NA","promoter-TSS (NM_009797)","promoter-TSS (NM_009797)",476,"NM_153091",229681,"Mm.206379","NM_153091","ENSMUSG00000045576","St7l","St7r","suppression of tumorigenicity 7-like","protein-coding"]
[1513,"chr17",80944431,80945257,"+",0,"NA","exon (NM_026516, exon 1 of 4)","exon (NM_026516, exon 1 of 4)",212,"NM_026516",68027,"Mm.357108","NM_026516","ENSMUSG00000024245","Tmem178","2810417M05Rik|Tmem178a","transmembrane protein 178","protein-coding"]
[1264,"chr16",17405254,17406401,"+",0,"NA","promoter-TSS (NM_023348)","promoter-TSS (NM_023348)",-173,"NM_023348",67474,"Mm.271992","NM_023348","ENSMUSG00000022765","Snap29","1300018G05Rik|AI891940|AU020222|BB131856|Gs32","synaptosomal-associated protein 29","protein-coding"]
[2490,"chr5",30588145,30589050,"+",0,"NA","promoter-TSS (NR_040427)","promoter-TSS (NR_040427)",22,"NR_040427",100502829,"Mm.39944","NR_040427","ENSMUSG00000053214","Gm9899","ENSMUSG00000053214","predicted gene 9899","ncRNA"]
[747,"chr12",65036144,65036792,"+",0,"NA","5' UTR (NM_177806, exon 1 of 14)","5' UTR (NM_177806, exon 1 of 14)",134,"NM_177806",328110,"Mm.283339","NM_177806","ENSMUSG00000035597","Prpf39","Srcs1","PRP39 pre-mRNA processing factor 39 homolog (yeast)","protein-coding"]
[159,"chr1",179667933,179668769,"+",0,"NA","5' UTR (NM_178653, exon 1 of 12)","5' UTR (NM_178653, exon 1 of 12)",120,"NM_178653",109232,"Mm.136458","NM_178653","ENSMUSG00000038936","Sccpdh","AW214504|C330023F11Rik","saccharopine dehydrogenase (putative)","protein-coding"]
[2563,"chr5",96997065,96998525,"+",0,"NA","5' UTR (NM_080708, exon 1 of 16)","5' UTR (NM_080708, exon 1 of 16)",106,"NM_080708",140780,"Mm.281490","NM_080708","ENSMUSG00000034663","Bmp2k","4933417M22Rik|AA673486|AV128808|BIKE","BMP2 inducible kinase","protein-coding"]
[3086,"chr7",141391535,141392578,"+",0,"NA","promoter-TSS (NM_011528)","promoter-TSS (NM_011528)",-104,"NM_011528",21351,"Mm.29182","NM_011528","ENSMUSG00000025503","Taldo1","-","transaldolase 1","protein-coding"]
[1633,"chr19",4756159,4756844,"+",0,"NA","promoter-TSS (NM_025717)","promoter-TSS (NM_025717)",-24,"NM_025717",66704,"Mm.396734","NM_025717","ENSMUSG00000033760","Rbm4b","4921506I22Rik|AI504630|AI506404|Lark2|Neosin","RNA binding motif protein 4B","protein-coding"]
[47,"chr1",61638685,61639694,"+",0,"NA","5' UTR (NM_001081050, exon 1 of 23)","5' UTR (NM_001081050, exon 1 of 23)",365,"NM_001081050",72823,"Mm.35153","NM_001081050","ENSMUSG00000052062","Pard3b","1810008K04Rik|2010002N16Rik|2810455B10Rik|Als2cr19|PAR3B|PAR3L|PAR3beta","par-3 family cell polarity regulator beta","protein-coding"]
[1427,"chr17",29660427,29661412,"+",0,"NA","intron (NM_028791, intron 1 of 23)","CpG",324,"NM_028791",74157,"Mm.390979","NM_028791",null,"Cmtr1","1300018I05Rik|AI451264|Ftsjd2|MTr1","cap methyltransferase 1","protein-coding"]
[1942,"chr2",119034758,119035398,"+",0,"NA","exon (NM_173450, exon 1 of 3)","exon (NM_173450, exon 1 of 3)",288,"NM_173450",271842,"Mm.33617","NM_173450",null,"Rpusd2","4921503C21Rik|9630001E10|BB231107","RNA pseudouridylate synthase domain containing 2","protein-coding"]
[1484,"chr17",55970007,55970746,"+",0,"NA","promoter-TSS (NM_009168)","promoter-TSS (NM_009168)",-106,"NM_001159523",20420,"Mm.20908","NM_009168","ENSMUSG00000039154","Shd","AI413439","src homology 2 domain-containing transforming protein D","protein-coding"]
[1017,"chr14",47472328,47473250,"+",0,"NA","intron (NM_030236, intron 1 of 1)","CpG",228,"NM_001146085",78938,"Mm.11935","NM_030236","ENSMUSG00000037536","Fbxo34","2900057B08Rik|5830426G16Rik","F-box protein 34","protein-coding"]
[270,"chr10",79734920,79736156,"+",0,"NA","TTS (NM_172551)","TTS (NM_172551)",11043,"NM_172551",216151,"Mm.39001","NM_172551","ENSMUSG00000020329","Polrmt","1110018N15Rik|4932416K13","polymerase (RNA) mitochondrial (DNA directed)","protein-coding"]
[1057,"chr14",75844675,75845344,"+",0,"NA","promoter-TSS (NM_009429)","promoter-TSS (NM_009429)",-45,"NR_045294",100043189,"Mm.426329","NR_045294",null,"Gm4285","-","predicted gene 4285","ncRNA"]
[2042,"chr2",164769424,164770346,"+",0,"NA","promoter-TSS (NM_026785)","promoter-TSS (NM_026785)",-44,"NM_026785",68612,"Mm.89830","NM_026785","ENSMUSG00000001403","Ube2c","1110015A16Rik|D2Ertd695e","ubiquitin-conjugating enzyme E2C","protein-coding"]
[538,"chr11",78178656,78179422,"+",0,"NA","TTS (NR_106113)","TTS (NR_106113)",212,"NR_106113",102465761,null,"NR_106113","ENSMUSG00000099101","Mir7653","Gm27900|mmu-mir-7653","microRNA 7653","ncRNA"]
[2840,"chr6",120958449,120959046,"+",0,"NA","exon (NM_001270475, exon 26 of 32)","exon (NM_001270475, exon 26 of 32)",-41927,"NM_007544",12122,"Mm.235081","NM_007544","ENSMUSG00000004446","Bid","2700049M22Rik|AI875481|AU022477","BH3 interacting domain death agonist","protein-coding"]
[1602,"chr18",67932672,67933493,"+",0,"NA","promoter-TSS (NM_172631)","promoter-TSS (NM_172631)",-175,"NM_172631",52662,"Mm.440183","NM_172631","ENSMUSG00000024544","Ldlrad4","8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik","low density lipoprotein receptor class A domain containing 4","protein-coding"]
[521,"chr11",75655650,75656585,"+",0,"NA","5' UTR (NM_001080775, exon 1 of 32)","5' UTR (NM_001080775, exon 1 of 32)",102,"NM_001080775",17913,"Mm.234502","NM_008659","ENSMUSG00000017774","Myo1c","C80397|MMIb|MYO1E|NMI|mm1beta|myr2","myosin IC","protein-coding"]
[2007,"chr2",155517540,155518412,"+",0,"NA","promoter-TSS (NM_019811)","promoter-TSS (NM_019811)",-67,"NM_019811",60525,"Mm.255026","NM_019811","ENSMUSG00000027605","Acss2","1110017C11Rik|ACAS|Acas1|Acas2|AceCS1|Acs1","acyl-CoA synthetase short-chain family member 2","protein-coding"]
[1332,"chr16",87495264,87496092,"+",0,"NA","promoter-TSS (NR_040375)","promoter-TSS (NR_040375)",191,"NM_009840",12469,"Mm.328673","NM_009840","ENSMUSG00000025613","Cct8","AI132397|Cctq|Tcpq","chaperonin containing Tcp1, subunit 8 (theta)","protein-coding"]
[162,"chr1",180640591,180642057,"+",0,"NA","non-coding (NR_120498, exon 1 of 15)","non-coding (NR_120498, exon 1 of 15)",174,"NR_120498",72568,"Mm.275044","NM_175186","ENSMUSG00000058729","Lin9","2700022J23Rik|Bara|Lin-9|TGS|TGS1|mLin-9","lin-9 homolog (C. elegans)","protein-coding"]
[1923,"chr2",91921178,91922210,"+",0,"NA","promoter-TSS (NM_007699)","promoter-TSS (NM_007699)",-495,"NM_007699",12672,"Mm.330405","NM_007699",null,"Chrm4","Chrm-4|M4","cholinergic receptor, muscarinic 4","protein-coding"]
[880,"chr13",43784823,43785572,"+",0,"NA","promoter-TSS (NM_009856)","promoter-TSS (NM_009856)",85,"NM_001289915",12522,"Mm.57175","NM_009856","ENSMUSG00000015396","Cd83","-","CD83 antigen","protein-coding"]
[433,"chr11",53350330,53351396,"+",0,"NA","promoter-TSS (NM_033565)","promoter-TSS (NM_033565)",96,"NM_033565",93736,"Mm.395281","NM_033565","ENSMUSG00000049470","Aff4","AF5Q31|Alf4|Laf4l|MCEF","AF4/FMR2 family, member 4","protein-coding"]
[3461,"chr9",107906701,107907872,"+",0,"NA","exon (NM_009074, exon 1 of 19)","exon (NM_009074, exon 1 of 19)",397,"NR_109782",19882,"Mm.3901","NM_009074","ENSMUSG00000032584","Mst1r","CD136|CDw136|Fv-2|Fv2|PTK8|Ron|STK","macrophage stimulating 1 receptor (c-met-related tyrosine kinase)","protein-coding"]
[2164,"chr3",97901118,97901564,"+",0,"NA","5' UTR (NM_011342, exon 1 of 5)","5' UTR (NM_011342, exon 1 of 5)",114,"NM_011342",20333,"Mm.2551","NM_011342",null,"Sec22b","4930564D15Rik|AA517334|AI480645|C81333|ERS-24|Sec22l1","SEC22 homolog B, vesicle trafficking protein","protein-coding"]
[1399,"chr17",25828988,25829927,"+",0,"NA","TTS (NM_173741)","TTS (NM_173741)",414,"NM_028101",72106,"Mm.277599","NM_028101","ENSMUSG00000025736","Jmjd8","2610003J06Rik","jumonji domain containing 8","protein-coding"]
[1912,"chr2",83724240,83724806,"+",0,"NA","5' UTR (NM_008402, exon 1 of 30)","5' UTR (NM_008402, exon 1 of 30)",126,"NM_008402",16410,"Mm.227","NM_008402","ENSMUSG00000027087","Itgav","1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik","integrin alpha V","protein-coding"]
[3293,"chr8",122567573,122568431,"+",0,"NA","promoter-TSS (NM_026014)","promoter-TSS (NM_026014)",-13,"NM_026014",67177,"Mm.21873","NM_026014","ENSMUSG00000006585","Cdt1","2610318F11Rik|AW545653|C76791|Ris2","chromatin licensing and DNA replication factor 1","protein-coding"]
[986,"chr14",27335725,27336718,"+",0,"NA","exon (NM_001289687, exon 1 of 10)","exon (NM_001289687, exon 1 of 10)",184,"NM_001289687",71704,"Mm.248606","NM_027871","ENSMUSG00000021895","Arhgef3","1200004I24Rik|9830169H03Rik|C76747|Xpln","Rho guanine nucleotide exchange factor (GEF) 3","protein-coding"]
[786,"chr12",84996236,84997116,"+",0,"NA","exon (NM_178363, exon 1 of 21)","exon (NM_178363, exon 1 of 21)",355,"NM_178363",56531,"Mm.153183","NM_178363","ENSMUSG00000021244","Ylpm1","A930013E17Rik|ZAP|Zap3","YLP motif containing 1","protein-coding"]
[740,"chr12",32378711,32379947,"+",0,"NA","exon (NM_001162903, exon 1 of 1)","exon (NM_001162903, exon 1 of 1)",540,"NM_001162903",72123,"Mm.341352","NM_028111","ENSMUSG00000090946","Ccdc71l","2010109K11Rik|AV375874","coiled-coil domain containing 71 like","protein-coding"]
[1117,"chr15",60822754,60823914,"+",0,"NA","exon (NM_001162926, exon 2 of 2)","exon (NM_001162926, exon 2 of 2)",369,"NR_030696",320469,"Mm.230853","NM_177166",null,"9930014A18Rik","-","RIKEN cDNA 9930014A18 gene","ncRNA"]
[1008,"chr14",34673308,34674493,"+",0,"NA","promoter-TSS (NM_001301330)","promoter-TSS (NM_001301330)",-28,"NM_001004436",218914,"Mm.27957","NM_001004436","ENSMUSG00000041408","Wapl","A530089A20Rik|BC037674|DIF-2|FOE|Wapal","WAPL cohesin release factor","protein-coding"]
[3022,"chr7",116504102,116504881,"+",0,"NA","intron (NM_001130479, intron 1 of 13)","CpG",122,"NM_001130479",53322,"Mm.9901","NM_016773","ENSMUSG00000030659","Nucb2","AI607786|Calnuc|Nefa|Nesfatin-1","nucleobindin 2","protein-coding"]
[103,"chr1",125560532,125561627,"+",0,"NA","promoter-TSS (NM_028787)","promoter-TSS (NM_028787)",63,"NM_028787",74150,"Mm.28654","NM_028787","ENSMUSG00000026342","Slc35f5","1300003P13Rik|AI646727","solute carrier family 35, member F5","protein-coding"]
[3434,"chr9",95857405,95858215,"+",0,"NA","promoter-TSS (NM_001271569)","promoter-TSS (NM_001271569)",72,"NM_001271569",73410,"Mm.443314","NM_028533","ENSMUSG00000096655","1700065D16Rik","-","RIKEN cDNA 1700065D16 gene","protein-coding"]
[201,"chr10",24223363,24224164,"+",0,"NA","exon (NM_021509, exon 1 of 12)","exon (NM_021509, exon 1 of 12)",246,"NM_021509",59012,"Mm.285934","NM_021509","ENSMUSG00000020000","Moxd1","3230402N08Rik|MNCb-5203","monooxygenase, DBH-like 1","protein-coding"]
[871,"chr13",37826168,37827918,"+",0,"NA","promoter-TSS (NM_001039188)","intron (NR_033615, intron 1 of 9)",131,"NR_033615",68750,"Mm.491109","NM_026830","ENSMUSG00000039087","Rreb1","1110037N09Rik|AA414966|B930013M22Rik","ras responsive element binding protein 1","protein-coding"]
[1401,"chr17",26112986,26113931,"+",0,"NA","exon (NM_021793, exon 1 of 13)","exon (NM_021793, exon 1 of 13)",142,"NM_021793",60455,"Mm.304656","NM_021793","ENSMUSG00000024180","Tmem8","AW490096|M83|Tmem8a","transmembrane protein 8 (five membrane-spanning domains)","protein-coding"]
[719,"chr12",4592633,4593718,"+",0,"NA","5' UTR (NM_001198968, exon 1 of 40)","5' UTR (NM_001198968, exon 1 of 40)",167,"NM_001198968",20403,"Mm.341204","NM_011365","ENSMUSG00000020640","Itsn2","AI327390|Ese2|Sh3d1B|Sh3p18|mKIAA1256","intersectin 2","protein-coding"]
[3393,"chr9",59655940,59656984,"+",0,"NA","promoter-TSS (NM_011099)","promoter-TSS (NM_011099)",94,"NM_001253883",18746,"Mm.326167","NM_011099","ENSMUSG00000032294","Pkm","AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2","pyruvate kinase, muscle","protein-coding"]
[1529,"chr18",10617649,10618268,"+",0,"NA","intron (NM_009226, intron 1 of 3)","CpG",162,"NM_009226",20641,"Mm.603","NM_009226","ENSMUSG00000002477","Snrpd1","AA407109|AL023031|SMD1","small nuclear ribonucleoprotein D1","protein-coding"]
[902,"chr13",55152541,55153303,"+",0,"NA","5' UTR (NM_008011, exon 1 of 18)","5' UTR (NM_008011, exon 1 of 18)",104,"NM_008011",14186,"Mm.276715","NM_008011","ENSMUSG00000005320","Fgfr4","Fgfr-4","fibroblast growth factor receptor 4","protein-coding"]
[827,"chr12",111270974,111271921,"+",0,"NA","intron (NM_033603, intron 1 of 11)","CpG",351,"NM_033603",93835,"Mm.197639","NM_033603","ENSMUSG00000021278","Amn","-","amnionless","protein-coding"]
[266,"chr10",79669358,79669970,"+",0,"NA","exon (NM_148934, exon 1 of 2)","exon (NM_148934, exon 1 of 2)",254,"NM_148934",110012,"Mm.22623","NM_148934","ENSMUSG00000020308","Tpgs1","AV005629|Gm16517|Gtrgeo22|PGs1","tubulin polyglutamylase complex subunit 1","protein-coding"]
[2039,"chr2",164497253,164498138,"+",0,"NA","exon (NM_133779, exon 1 of 12)","exon (NM_133779, exon 1 of 12)",170,"NM_133779",78928,"Mm.28228","NM_133779","ENSMUSG00000017721","Pigt","2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7","phosphatidylinositol glycan anchor biosynthesis, class T","protein-coding"]
[1353,"chr17",5975131,5975888,"+",0,"NA","promoter-TSS (NM_011523)","promoter-TSS (NM_011523)",-77,"NM_001113351",20975,"Mm.236068","NM_011523","ENSMUSG00000023805","Synj2","AI481647|SJ2|mKIAA0348","synaptojanin 2","protein-coding"]
[1742,"chr19",45233412,45234175,"+",0,"NA","TTS (NM_010691)","TTS (NM_010691)",1443,"NM_010691",16814,"Mm.116815","NM_010691",null,"Lbx1","Lbx1h","ladybird homeobox homolog 1 (Drosophila)","protein-coding"]
[3128,"chr8",22476225,22477244,"+",0,"NA","promoter-TSS (NM_011394)","promoter-TSS (NM_011394)",34,"NM_011394",20516,"Mm.323901","NM_011394","ENSMUSG00000037656","Slc20a2","MolPit2|Pit-2|Pit2|Ram-1|Ram1","solute carrier family 20, member 2","protein-coding"]
[2585,"chr5",110230714,110231448,"+",0,"NA","promoter-TSS (NM_001253814)","promoter-TSS (NM_001253814)",77,"NM_027922",71782,"Mm.288442","NM_027922","ENSMUSG00000029501","Ankle2","1110001J12Rik|AI661024|D5Ertd585e","ankyrin repeat and LEM domain containing 2","protein-coding"]
[1624,"chr19",3767220,3768531,"+",0,"NA","intron (NM_144871, intron 1 of 11)","CpG",454,"NM_001167885",225888,"Mm.278578","NM_144871","ENSMUSG00000045098","Suv420h1","AA117471|C630029K18Rik|KMT5B|Suv4-20h1","suppressor of variegation 4-20 homolog 1 (Drosophila)","protein-coding"]
[2892,"chr7",25305929,25306673,"+",0,"NA","intron (NM_183311, intron 1 of 14)","CpG",193,"NM_183311",330485,"Mm.260740","NM_183311","ENSMUSG00000043843","Tmem145","B930076A02Rik","transmembrane protein 145","protein-coding"]
[3363,"chr9",47530318,47531974,"+",0,"NA","intron (NM_001025600, intron 1 of 8)","CpG",794,"NM_018770",54725,"Mm.234832","NM_018770","ENSMUSG00000032076","Cadm1","2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1","cell adhesion molecule 1","protein-coding"]
[1219,"chr15",100468412,100469230,"+",0,"NA","promoter-TSS (NM_134093)","promoter-TSS (NM_134093)",-213,"NM_134093",68614,"Mm.275272","NM_134093","ENSMUSG00000037353","Letmd1","1110019O13Rik|AI593524|BB130465|BB235638|HCCR-2|HCCR1|MCC-32|Mccr","LETM1 domain containing 1","protein-coding"]
[1695,"chr19",16435645,16436580,"+",0,"NA","5' UTR (NM_008137, exon 1 of 7)","5' UTR (NM_008137, exon 1 of 7)",445,"NM_008137",14675,"Mm.313181","NM_008137","ENSMUSG00000024697","Gna14","AU023208","guanine nucleotide binding protein, alpha 14","protein-coding"]
[2534,"chr5",64092649,64093425,"+",0,"NA","promoter-TSS (NM_025700)","promoter-TSS (NM_025700)",87,"NM_025700",66681,"Mm.2325","NM_025700","ENSMUSG00000029171","Pgm1","3230402E02Rik|Pgm-1|Pgm2","phosphoglucomutase 1","protein-coding"]
[97,"chr1",105663831,105664738,"+",0,"NA","promoter-TSS (NM_013784)","promoter-TSS (NM_013784)",423,"NM_173187",227446,"Mm.337339","NM_029349","ENSMUSG00000026319","2310035C23Rik","6430401N10|Kiaa1468|mKIAA1468","RIKEN cDNA 2310035C23 gene","protein-coding"]
[2983,"chr7",90442715,90444128,"+",0,"NA","exon (NM_145151, exon 1 of 1)","exon (NM_145151, exon 1 of 1)",640,"NR_073438",233490,"Mm.29496","NM_145151","ENSMUSG00000051451","Crebzf","1110034C16Rik|6330417B10Rik|LAZip|LAZipII|SMILE|Zf","CREB/ATF bZIP transcription factor","protein-coding"]
[2378,"chr4",133479690,133480938,"+",0,"NA","exon (NM_175307, exon 1 of 2)","exon (NM_175307, exon 1 of 2)",181,"NM_175307",100342,"Mm.204656","NM_175307","ENSMUSG00000046694","Fam46b","4732473B16Rik|AU045678|AU046069","family with sequence similarity 46, member B","protein-coding"]
[1704,"chr19",22138737,22139353,"+",0,"NA","promoter-TSS (NM_001035242)","promoter-TSS (NM_001035242)",-72,"NM_001035239",226025,"Mm.131943","NM_177341","ENSMUSG00000052387","Trpm3","6330504P12Rik|9330180E14|AU018608|B930001P07Rik|LTRPC3|MLSN2","transient receptor potential cation channel, subfamily M, member 3","protein-coding"]
[668,"chr11",115823581,115824778,"+",0,"NA","intron (NM_145438, intron 1 of 25)","CpG",121,"NM_001252532",217325,"Mm.290450","NM_145438","ENSMUSG00000020782","Llgl2","9130006H11Rik|Llglh2","lethal giant larvae homolog 2 (Drosophila)","protein-coding"]
[750,"chr12",69183474,69185094,"+",0,"NA","promoter-TSS (NM_025589)","promoter-TSS (NM_025589)",126,"NM_146035",217664,"Mm.206642","NM_146035","ENSMUSG00000043998","Mgat2","AA407964|CDGS2|GLCNACTII|GNT-II|GNT2","mannoside acetylglucosaminyltransferase 2","protein-coding"]
[688,"chr11",119355124,119355854,"+",0,"NA","promoter-TSS (NM_018822)","promoter-TSS (NM_018822)",21,"NM_018822",27029,"Mm.103788","NM_018822","ENSMUSG00000005043","Sgsh","4632406A19Rik","N-sulfoglucosamine sulfohydrolase (sulfamidase)","protein-coding"]
[1749,"chr19",47067563,47068636,"+",0,"NA","exon (NM_177342, exon 1 of 11)","exon (NM_177342, exon 1 of 11)",351,"NM_177342",226182,"Mm.301522","NM_177342","ENSMUSG00000025049","Taf5","6330528C20Rik|AV117817","TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor","protein-coding"]
[774,"chr12",81859851,81861230,"+",0,"NA","intron (NM_018814, intron 1 of 35)","CpG",510,"NM_018814",54604,"Mm.86584","NM_018814","ENSMUSG00000021140","Pcnx","2900024E21Rik|3526401J03Rik|AF096286|AI327143|AI413187|Pcnxl1","pecanex homolog (Drosophila)","protein-coding"]
[1126,"chr15",75703912,75704675,"+",0,"NA","promoter-TSS (NM_001163465)","promoter-TSS (NM_001163465)",5,"NM_008164",14787,"Mm.57052","NM_008164","ENSMUSG00000022580","Rhpn1","BB023497|Grbp|Rhophilin|mKIAA1929","rhophilin, Rho GTPase binding protein 1","protein-coding"]
[3463,"chr9",108049049,108049833,"+",0,"NA","TTS (NM_013785)","TTS (NM_013785)",151,"NM_177910",331026,"Mm.22554","NM_177910","ENSMUSG00000070284","Gmppb","AI317178|E430010H19","GDP-mannose pyrophosphorylase B","protein-coding"]
[2128,"chr3",69316817,69317601,"+",0,"NA","5' UTR (NM_178726, exon 1 of 4)","5' UTR (NM_178726, exon 1 of 4)",291,"NM_178726",242083,"Mm.40577","NM_178726",null,"Ppm1l","3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175","protein phosphatase 1 (formerly 2C)-like","protein-coding"]
[910,"chr13",56438080,56438775,"+",0,"NA","promoter-TSS (NM_177809)","promoter-TSS (NM_177809)",72,"NM_177809",328258,"Mm.482177","NM_177809",null,"Slc25a48","AU042651|E230025K15","solute carrier family 25, member 48","protein-coding"]
[2701,"chr5",142702065,142703173,"+",0,"NA","intron (NM_146257, intron 1 of 10)","intron (NM_146257, intron 1 of 10)",518,"NM_146257",243328,"Mm.125942","NM_146257","ENSMUSG00000050822","Slc29a4","ENT4|mPMAT","solute carrier family 29 (nucleoside transporters), member 4","protein-coding"]
[693,"chr11",119943036,119943672,"+",0,"NA","intron (NM_130862, intron 1 of 13)","CpG",262,"NM_130862",108100,"Mm.197534","NM_130862","ENSMUSG00000025372","Baiap2","IRSp53|R75030","brain-specific angiogenesis inhibitor 1-associated protein 2","protein-coding"]
[1341,"chr16",91646737,91647902,"+",0,"NA","promoter-TSS (NM_178880)","promoter-TSS (NM_178880)",-347,"NM_010256",14450,"Mm.4505","NM_010256","ENSMUSG00000022962","Gart","Gaps|Prgs","phosphoribosylglycinamide formyltransferase","protein-coding"]
[2684,"chr5",138279668,138280638,"+",0,"NA","promoter-TSS (NM_016964)","promoter-TSS (NM_016964)",-216,"NM_172412",71951,"Mm.77066","NM_172412","ENSMUSG00000029510","Gpc2","2410016G05Rik","glypican 2 (cerebroglycan)","protein-coding"]
[3424,"chr9",79792829,79793793,"+",0,"NA","promoter-TSS (NR_040734)","promoter-TSS (NR_040734)",119,"NM_133718",69981,"Mm.486324","NM_133718","ENSMUSG00000032328","Tmem30a","2010200I23Rik|AW540225|Cdc50a|D9Wsu20e","transmembrane protein 30A","protein-coding"]
[1534,"chr18",12333685,12334506,"+",0,"NA","promoter-TSS (NM_010680)","promoter-TSS (NM_010680)",71,"NM_010680",16774,"Mm.42012","NM_010680","ENSMUSG00000024421","Lama3","Lama3B|[a]3B","laminin, alpha 3","protein-coding"]
[2570,"chr5",104046599,104047238,"+",0,"NA","promoter-TSS (NM_028794)","promoter-TSS (NM_028794)",54,"NM_028794",74167,"Mm.241484","NM_028794","ENSMUSG00000029310","Nudt9","1190002C07Rik|ADPR-PPase|AI462474","nudix (nucleoside diphosphate linked moiety X)-type motif 9","protein-coding"]
[893,"chr13",51171007,51172026,"+",0,"NA","exon (NM_029173, exon 1 of 2)","exon (NM_029173, exon 1 of 2)",491,"NM_029173",75124,"Mm.179243","NM_029173","ENSMUSG00000021396","Nxnl2","4930519N16Rik|Rdcvf2","nucleoredoxin-like 2","protein-coding"]
[2309,"chr4",106560765,106561329,"+",0,"NA","promoter-TSS (NM_053272)","promoter-TSS (NM_053272)",9,"NM_053272",74754,"Mm.133370","NM_053272","ENSMUSG00000034926","Dhcr24","2310076D10Rik|5830417J06Rik|mKIAA0018","24-dehydrocholesterol reductase","protein-coding"]
[1915,"chr2",90745315,90746115,"+",0,"NA","exon (NM_018828, exon 1 of 17)","exon (NM_018828, exon 1 of 17)",345,"NM_018828",55935,"Mm.489638","NM_018828","ENSMUSG00000008200","Fnbp4","FBP30|Fnbp30|mKIAA1014","formin binding protein 4","protein-coding"]
[2737,"chr6",29735301,29736339,"+",0,"NA","5' UTR (NM_176996, exon 1 of 12)","5' UTR (NM_176996, exon 1 of 12)",323,"NM_176996",319757,"Mm.29279","NM_176996","ENSMUSG00000001761","Smo","E130215L21Rik|Smoh|bnb|smoothened","smoothened, frizzled class receptor","protein-coding"]
[804,"chr12",102282692,102283491,"+",0,"NA","promoter-TSS (NM_177620)","promoter-TSS (NM_177620)",17,"NM_177620",217835,"Mm.24145","NM_177620","ENSMUSG00000044456","Rin3","6430500K07|C86933","Ras and Rab interactor 3","protein-coding"]
[83,"chr1",91297876,91298723,"+",0,"NA","promoter-TSS (NM_016717)","promoter-TSS (NM_016717)",-39,"NM_016717",50880,"Mm.25724","NM_016717","ENSMUSG00000026307","Scly","9830169H08|A930015N15Rik|SCL|Scly1|Scly2","selenocysteine lyase","protein-coding"]
[3375,"chr9",54863454,54864278,"+",0,"NA","5' UTR (NM_022655, exon 1 of 22)","5' UTR (NM_022655, exon 1 of 22)",111,"NM_022655",64602,"Mm.208991","NM_022655","ENSMUSG00000032293","Ireb2","D9Ertd85e|Irp2","iron responsive element binding protein 2","protein-coding"]
[2558,"chr5",91962736,91963429,"+",0,"NA","promoter-TSS (NM_026557)","promoter-TSS (NM_026557)",-14,"NM_001271797",68098,"Mm.159453","NM_026557","ENSMUSG00000029397","Rchy1","ARNIP|CHIMP|Pirh2|Zfp363|Znf363","ring finger and CHY zinc finger domain containing 1","protein-coding"]
[1385,"chr17",24849755,24850946,"+",0,"NA","promoter-TSS (NM_023480)","promoter-TSS (NM_023480)",-48,"NM_023480",68636,"Mm.347964","NM_023480","ENSMUSG00000045316","Fahd1","1110025H10Rik|AV002085","fumarylacetoacetate hydrolase domain containing 1","protein-coding"]
[2672,"chr5",137029993,137030801,"+",0,"NA","5' UTR (NM_001039385, exon 1 of 2)","5' UTR (NM_001039385, exon 1 of 2)",102,"NM_001039385",381677,"Mm.389697","NM_001039385","ENSMUSG00000037428","Vgf","Gm1052","VGF nerve growth factor inducible","protein-coding"]
[1818,"chr2",27886094,27887416,"+",0,"NA","5' UTR (NM_015734, exon 1 of 66)","5' UTR (NM_015734, exon 1 of 66)",330,"NM_015734",12831,"Mm.7281","NM_015734","ENSMUSG00000026837","Col5a1","AI413331","collagen, type V, alpha 1","protein-coding"]
[2094,"chr3",32817257,32818125,"+",0,"NA","promoter-TSS (NM_001013024)","promoter-TSS (NM_001013024)",65,"NM_001013024",72607,"Mm.316153","NM_001013024","ENSMUSG00000056900","Usp13","2700071E21Rik|AI848077|ISOT3|IsoT-3","ubiquitin specific peptidase 13 (isopeptidase T-3)","protein-coding"]
[962,"chr13",119428391,119429675,"+",0,"NA","5' UTR (NM_145457, exon 1 of 11)","5' UTR (NM_145457, exon 1 of 11)",131,"NM_145457",218693,"Mm.490243","NM_145457","ENSMUSG00000025451","Paip1","PAIP-1","polyadenylate binding protein-interacting protein 1","protein-coding"]
[755,"chr12",71111160,71112042,"+",0,"NA","intron (NM_029227, intron 1 of 4)","CpG",173,"NM_029227",75266,"Mm.402075","NM_029227","ENSMUSG00000021078","Tomm20l","4930553D19Rik","translocase of outer mitochondrial membrane 20 homolog (yeast)-like","protein-coding"]
[1085,"chr15",9070972,9071717,"+",0,"NA","promoter-TSS (NM_001085410)","promoter-TSS (NM_001085410)",84,"NM_001040395",68646,"Mm.244226","NM_001040395","ENSMUSG00000022253","Nadk2","MNADK|Nadkd1","NAD kinase 2, mitochondrial","protein-coding"]
[1714,"chr19",29047445,29048213,"+",0,"NA","promoter-TSS (NM_021299)","promoter-TSS (NM_021299)",73,"NM_021299",56248,"Mm.196067","NM_021299","ENSMUSG00000024782","Ak3","AA407498|AI506714|AK-3|Ak3l|Ak3l1|Akl3l","adenylate kinase 3","protein-coding"]
[1837,"chr2",30415936,30416647,"+",0,"NA","promoter-TSS (NM_007760)","promoter-TSS (NM_007760)",241,"NM_138748",110854,"Mm.275393","NM_138748","ENSMUSG00000039515","Ppp2r4","2610042B21Rik|C77440|N28142|PR53","protein phosphatase 2A activator, regulatory subunit B","protein-coding"]
[143,"chr1",160194847,160195477,"+",0,"NA","promoter-TSS (NM_025474)","promoter-TSS (NM_025474)",-98,"NM_025474",64659,"Mm.29599","NM_025474",null,"Mrps14","1810032L21Rik|AL022847|Rpms14","mitochondrial ribosomal protein S14","protein-coding"]
[3090,"chr7",141475112,141475809,"+",0,"NA","promoter-TSS (NM_001252588)","promoter-TSS (NM_001252588)",224,"NM_053082",64540,"Mm.489619","NM_053082","ENSMUSG00000025511","Tspan4","AI325509|AI746565|D130042I01Rik|NAG-2|Tm4sf7|Tspan-4","tetraspanin 4","protein-coding"]
[1403,"chr17",26212689,26214044,"+",0,"NA","3' UTR (NM_207217, exon 12 of 12)","3' UTR (NM_207217, exon 12 of 12)",10404,"NM_001081069",50782,"Mm.109840","NM_001081069","ENSMUSG00000024186","Rgs11","C78048","regulator of G-protein signaling 11","protein-coding"]
[2323,"chr4",116150144,116150730,"+",0,"NA","promoter-TSS (NM_001290658)","promoter-TSS (NM_001290658)",-81,"NM_029786",68273,"Mm.196045","NM_026651","ENSMUSG00000028700","Pomgnt1","0610016I07Rik|4930467B06Rik","protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase","protein-coding"]
[3049,"chr7",127841654,127842593,"+",0,"NA","intron (NM_009294, intron 1 of 10)","CpG",315,"NM_009294",20909,"Mm.24867","NM_009294","ENSMUSG00000030805","Stx4a","Stx4|Syn-4|Syn4","syntaxin 4A (placental)","protein-coding"]
[2822,"chr6",113442485,113443168,"+",0,"NA","intron (NM_001243739, intron 1 of 1)","CpG",257,"NM_001243739",67767,"Mm.2053","NM_026365","ENSMUSG00000051256","Jagn1","5830427H10Rik","jagunal homolog 1 (Drosophila)","protein-coding"]
[1051,"chr14",70889459,70890109,"+",0,"NA","promoter-TSS (NM_008115)","promoter-TSS (NM_008115)",-323,"NM_001302095",14586,"Mm.32619","NM_008115","ENSMUSG00000022103","Gfra2","-","glial cell line derived neurotrophic factor family receptor alpha 2","protein-coding"]
[2268,"chr4",46138182,46139098,"+",0,"NA","promoter-TSS (NM_173033)","promoter-TSS (NM_173033)",129,"NM_001033201",433702,"Mm.389536","NM_001033201","ENSMUSG00000028330","Ncbp1","AU014645|AW538051|CBP80","nuclear cap binding protein subunit 1","protein-coding"]
[3033,"chr7",122288664,122289919,"+",0,"NA","5' UTR (NM_008855, exon 1 of 17)","5' UTR (NM_008855, exon 1 of 17)",166,"NM_008855",18751,"Mm.207496","NM_008855","ENSMUSG00000052889","Prkcb","PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2","protein kinase C, beta","protein-coding"]
[1497,"chr17",64601188,64602213,"+",0,"NA","promoter-TSS (NM_008549)","promoter-TSS (NM_008549)",51,"NM_008549",17158,"Mm.2433","NM_008549","ENSMUSG00000024085","Man2a1","Mana-2|Mana2|Map-2","mannosidase 2, alpha 1","protein-coding"]
[518,"chr11",75587888,75588818,"+",0,"NA","intron (NM_008850, intron 1 of 11)","CpG",274,"NM_008850",18738,"Mm.3128","NM_008850","ENSMUSG00000017781","Pitpna","Pitpn|vb|vibrator","phosphatidylinositol transfer protein, alpha","protein-coding"]
[497,"chr11",70669326,70670739,"+",0,"NA","promoter-TSS (NM_172561)","promoter-TSS (NM_172561)",-616,"NM_001167669",216873,"Mm.432524","NM_172561","ENSMUSG00000018287","Spag7","5730443G10|ACRP|FSA-1|Fsa1l","sperm associated antigen 7","protein-coding"]
[2914,"chr7",35118431,35119498,"+",0,"NA","promoter-TSS (NM_007678)","promoter-TSS (NM_007678)",-329,"NM_001287521",12606,"Mm.349667","NM_007678","ENSMUSG00000034957","Cebpa","C/ebpalpha|CBF-A|Cebp","CCAAT/enhancer binding protein (C/EBP), alpha","protein-coding"]
[2906,"chr7",28864052,28864603,"+",0,"NA","promoter-TSS (NM_008496)","promoter-TSS (NM_008496)",-59,"NM_008496",16858,"Mm.20973","NM_008496",null,"Lgals7","Galectin-7|Pig1","lectin, galactose binding, soluble 7","protein-coding"]
[1211,"chr15",99055122,99055992,"+",0,"NA","exon (NM_001163589, exon 1 of 9)","exon (NM_001163589, exon 1 of 9)",383,"NM_001163589",19132,"Mm.2477","NM_013639","ENSMUSG00000023484","Prph","Prph1","peripherin","protein-coding"]
[3221,"chr8",94666547,94667320,"+",0,"NA","promoter-TSS (NM_024269)","promoter-TSS (NM_024269)",-158,"NM_024269",107566,"Mm.393247","NM_024191","ENSMUSG00000031776","Arl2bp","1700010P10Rik|1700027H16Rik|6330544B05Rik|AI482273|AI849834|BART|Bart1","ADP-ribosylation factor-like 2 binding protein","protein-coding"]
[2852,"chr6",133105137,133105818,"+",0,"NA","exon (NM_001271582, exon 1 of 2)","exon (NM_001271582, exon 1 of 2)",238,"NR_073368",381820,"Mm.291762","NM_001163445","ENSMUSG00000072704","Smim10l1","2700089E24Rik|AI662692","small integral membrane protein 10 like 1","protein-coding"]
[2732,"chr6",17307481,17308149,"+",0,"NA","5' UTR (NM_001243064, exon 1 of 2)","5' UTR (NM_001243064, exon 1 of 2)",175,"NM_001243064",12389,"Mm.28278","NM_007616","ENSMUSG00000007655","Cav1","Cav|Cav-1","caveolin 1, caveolae protein","protein-coding"]
[2155,"chr3",94478499,94479367,"+",0,"NA","5' UTR (NM_001289613, exon 1 of 13)","5' UTR (NM_001289613, exon 1 of 13)",384,"NM_172434",78784,"Mm.44292","NM_172434","ENSMUSG00000028137","Celf3","4930415M08Rik|BRUNOL1|CAGH4|ERDA4|Tnrc4","CUGBP, Elav-like family member 3","protein-coding"]
[169,"chr1",185203792,185204636,"+",0,"NA","promoter-TSS (NM_001163754)","promoter-TSS (NM_001163754)",46,"NM_001163754",98732,"Mm.275841","NM_172649","ENSMUSG00000039318","Rab3gap2","1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839","RAB3 GTPase activating protein subunit 2","protein-coding"]
[411,"chr11",43528351,43529574,"+",0,"NA","5' UTR (NM_001045530, exon 1 of 6)","5' UTR (NM_001045530, exon 1 of 6)",213,"NM_001045530",380694,"Mm.247595","NM_001045530","ENSMUSG00000044707","Ccnjl","Gm877","cyclin J-like","protein-coding"]
[2991,"chr7",99267383,99267943,"+",0,"NA","promoter-TSS (NM_001043355)","promoter-TSS (NM_001043355)",216,"NM_001048167",17760,"Mm.154087","NM_010837","ENSMUSG00000055407","Map6","2810411E12Rik|Map-6|Mtap6|STOP","microtubule-associated protein 6","protein-coding"]
[2399,"chr4",138304429,138305132,"+",0,"NA","promoter-TSS (NM_007838)","promoter-TSS (NM_007838)",42,"NM_007838",13200,"Mm.7236","NM_007838","ENSMUSG00000028757","Ddost","-","dolichyl-di-phosphooligosaccharide-protein glycotransferase","protein-coding"]
[1542,"chr18",24205257,24206688,"+",0,"NA","promoter-TSS (NM_001160404)","promoter-TSS (NM_001160404)",-22,"NM_001160404",14423,"Mm.30249","NM_013814","ENSMUSG00000000420","Galnt1","-","UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1","protein-coding"]
[1711,"chr19",25672112,25672868,"+",0,"NA","promoter-TSS (NR_045347)","promoter-TSS (NR_045347)",79,"NM_145831",226049,"Mm.275572","NM_145831","ENSMUSG00000048138","Dmrt2","Terra","doublesex and mab-3 related transcription factor 2","protein-coding"]
[2836,"chr6",119902378,119903183,"+",0,"NA","promoter-TSS (NM_011236)","promoter-TSS (NM_011236)",82,"NM_001166381",19365,"Mm.149","NM_011236","ENSMUSG00000030166","Rad52","Rad52yh","RAD52 homolog (S. cerevisiae)","protein-coding"]
[2102,"chr3",40799820,40800886,"+",0,"NA","intron (NM_011495, intron 1 of 15)","CpG",402,"NR_045576",20873,"Mm.3794","NM_011495","ENSMUSG00000025758","Plk4","1700028H20|AI385771|Sak|Stk18","polo-like kinase 4","protein-coding"]
[2579,"chr5",107900393,107901251,"+",0,"NA","intron (NM_016980, intron 1 of 7)","CpG",294,"NM_016980",100503670,"Mm.277897","NM_016980","ENSMUSG00000058558","Rpl5","U21RNA","ribosomal protein L5","protein-coding"]
[478,"chr11",68900903,68901975,"+",0,"NA","promoter-TSS (NM_009080)","promoter-TSS (NM_009080)",-127,"NM_009080",19941,"Mm.3229","NM_009080","ENSMUSG00000060938","Rpl26","SIG-20","ribosomal protein L26","protein-coding"]
[3242,"chr8",106168308,106169312,"+",0,"NA","promoter-TSS (NM_178798)","promoter-TSS (NM_178798)",-65,"NM_178798",330836,"Mm.46749","NM_178798","ENSMUSG00000031904","Slc7a6","AI643885|LAT-2|LAT3","solute carrier family 7 (cationic amino acid transporter, y+ system), member 6","protein-coding"]
[384,"chr11",5861725,5863109,"+",0,"NA","intron (NM_009636, intron 1 of 20)","intron (NM_009636, intron 1 of 20)",551,"NM_001291857",11568,"Mm.3317","NM_009636","ENSMUSG00000020473","Aebp1","ACLP","AE binding protein 1","protein-coding"]
[398,"chr11",22512207,22512930,"+",0,"NA","exon (NM_153596, exon 1 of 4)","exon (NM_153596, exon 1 of 4)",285,"NM_153596",103765,"Mm.221274","NM_153596","ENSMUSG00000049904","Tmem17","AI503894|AW049890","transmembrane protein 17","protein-coding"]
[836,"chr12",112145918,112147016,"+",0,"NA","intron (NM_001097621, intron 1 of 15)","CpG-3550",259,"NM_001097621",668303,"Mm.313104","NM_001097621","ENSMUSG00000021294","Kif26a","mKIAA1236","kinesin family member 26A","protein-coding"]
[2016,"chr2",156720458,156721518,"+",0,"NA","promoter-TSS (NM_001042487)","promoter-TSS (NM_001042487)",23,"NM_001042488",228836,"Mm.22094","NM_146128","ENSMUSG00000061689","Dlgap4","AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16","discs, large homolog-associated protein 4 (Drosophila)","protein-coding"]
[3182,"chr8",79294452,79295560,"+",0,"NA","promoter-TSS (NR_045823)","promoter-TSS (NR_045823)",-50,"NM_133823",109136,"Mm.26510","NM_133823","ENSMUSG00000037022","Mmaa","2810018E08Rik|AI840684","methylmalonic aciduria (cobalamin deficiency) type A","protein-coding"]
[3068,"chr7",139085920,139087031,"+",0,"NA","intron (NM_011993, intron 1 of 13)","CpG",474,"NM_011993",26757,"Mm.250414","NM_011993","ENSMUSG00000025478","Dpysl4","AI173505|CRMP-3|Crmp3|DPY4|Drp-4|Ulip4","dihydropyrimidinase-like 4","protein-coding"]
[955,"chr13",112660498,112661312,"+",0,"NA","intron (NM_178746, intron 1 of 14)","intron (NM_178746, intron 1 of 14)",139,"NM_178746",268706,"Mm.40834","NM_175376","ENSMUSG00000047789","Slc38a9","4833412L08Rik|6720411P22Rik|9130023D20Rik|9430067K09Rik|A730092C09","solute carrier family 38, member 9","protein-coding"]
[942,"chr13",96924509,96925517,"+",0,"NA","intron (NM_001166065, intron 1 of 2)","CpG",324,"NM_001166065",218476,"Mm.483490","NM_001166065","ENSMUSG00000091387","Gcnt4","C2gnt3|Gm279|Gm73","glucosaminyl (N-acetyl) transferase 4, core 2 (beta-1,6-N-acetylglucosaminyltransferase)","protein-coding"]
[1735,"chr19",43689332,43690185,"+",0,"NA","promoter-TSS (NM_053103)","promoter-TSS (NM_053103)",69,"NM_053103",93685,"Mm.248237","NM_053103","ENSMUSG00000025192","Entpd7","1810012B13Rik|1810020C02Rik|2810003F23Rik|LALP1|Lysal2","ectonucleoside triphosphate diphosphohydrolase 7","protein-coding"]
[1376,"chr17",24488284,24489707,"+",0,"NA","exon (NM_027937, exon 1 of 20)","exon (NM_027937, exon 1 of 20)",212,"NM_027937",268932,"Mm.70989","NM_027937","ENSMUSG00000033597","Caskin1","3300002N10Rik|C130061I24|C630036E02Rik|mKIAA1306","CASK interacting protein 1","protein-coding"]
[1888,"chr2",68861137,68862490,"+",0,"NA","intron (NM_172856, intron 1 of 9)","CpG",256,"NM_172856",241447,"Mm.222222","NM_172856","ENSMUSG00000027035","Cers6","4732462C07Rik|AW544719|Lass6|T1L","ceramide synthase 6","protein-coding"]
[3512,"chr9",124423627,124424491,"+",0,"NA","non-coding (NR_102721, exon 1 of 2)","non-coding (NR_102721, exon 1 of 2)",272,"NR_015516",75135,"Mm.476814","NR_015516",null,"4930526I15Rik","1600027J15Rik","RIKEN cDNA 4930526I15 gene","ncRNA"]
[3267,"chr8",117157586,117158692,"+",0,"NA","promoter-TSS (NM_001081151)","promoter-TSS (NM_001081151)",4,"NM_001081151",209239,"Mm.132992","NM_001081151","ENSMUSG00000052557","Gan","A330045G18|gigaxonin","giant axonal neuropathy","protein-coding"]
[2030,"chr2",160730725,160732421,"+",0,"NA","intron (NM_021280, intron 1 of 33)","CpG",263,"NM_021280",18803,"Mm.44463","NM_021280","ENSMUSG00000016933","Plcg1","AI894140|Cded|Plc-1|Plc-gamma1|Plcg-1","phospholipase C, gamma 1","protein-coding"]
[2286,"chr4",63215166,63216761,"+",0,"NA","intron (NM_025685, intron 1 of 60)","CpG-9975",551,"NM_025685",373864,"Mm.194116","NM_025685","ENSMUSG00000045672","Col27a1","5730512J02Rik|AI449266|mKIAA1870","collagen, type XXVII, alpha 1","protein-coding"]
[2369,"chr4",131873536,131874208,"+",0,"NA","intron (NM_020587, intron 1 of 5)","CpG",233,"NM_020587",57317,"Mm.2478","NM_020587","ENSMUSG00000028911","Srsf4","5730499P16Rik|AW550192|MNCb-2616|SRp75|Sfrs4","serine/arginine-rich splicing factor 4","protein-coding"]
[2647,"chr5",125475608,125476192,"+",0,"NA","promoter-TSS (NM_030210)","promoter-TSS (NM_030210)",27,"NM_030210",78894,"Mm.431573","NM_030210","ENSMUSG00000029482","Aacs","2210408B16Rik|SUR5","acetoacetyl-CoA synthetase","protein-coding"]
[1595,"chr18",66458294,66459064,"+",0,"NA","promoter-TSS (NM_021451)","promoter-TSS (NM_021451)",75,"NM_021451",58801,"Mm.271878","NM_021451","ENSMUSG00000024521","Pmaip1","Noxa","phorbol-12-myristate-13-acetate-induced protein 1","protein-coding"]
[190,"chr10",11149153,11149959,"+",0,"NA","5' UTR (NM_001077707, exon 1 of 30)","5' UTR (NM_001077707, exon 1 of 30)",126,"NM_001284354",268281,"Mm.133101","NM_172937","ENSMUSG00000090112","Shprh","2610103K11Rik|AA450458|AU024614|BC006883|D230017O13Rik|E130018M05","SNF2 histone linker PHD RING helicase","protein-coding"]
[2816,"chr6",108828243,108829269,"+",0,"NA","exon (NM_138677, exon 1 of 12)","exon (NM_138677, exon 1 of 12)",115,"NM_138677",192193,"Mm.21596","NM_138677","ENSMUSG00000030104","Edem1","A130059K23Rik|EDEM|mKIAA0212","ER degradation enhancer, mannosidase alpha-like 1","protein-coding"]
[1750,"chr19",47090067,47091110,"+",0,"NA","promoter-TSS (NM_023211)","promoter-TSS (NM_023211)",37,"NM_023211",66477,"Mm.29722","NM_023211","ENSMUSG00000071528","Usmg5","2010301L15Rik","upregulated during skeletal muscle growth 5","protein-coding"]
[1808,"chr2",26315295,26316667,"+",0,"NA","intron (NM_153410, intron 1 of 13)","intron (NM_153410, intron 1 of 13)",448,"NM_153410",67839,"Mm.266611","NM_153410","ENSMUSG00000026930","Gpsm1","1810037C22Rik|AW107933|Ags3","G-protein signalling modulator 1 (AGS3-like, C. elegans)","protein-coding"]
[2802,"chr6",90369336,90370741,"+",0,"NA","exon (NM_030260, exon 1 of 6)","exon (NM_030260, exon 1 of 6)",544,"NM_030260",80292,"Mm.100116","NM_030260","ENSMUSG00000034430","Zxdc","A930012H20|B930086F11Rik|BC003332","ZXD family zinc finger C","protein-coding"]
[822,"chr12",110601154,110602248,"+",0,"NA","exon (NM_030238, exon 1 of 77)","exon (NM_030238, exon 1 of 77)",306,"NM_030238",13424,"Mm.181430","NM_030238","ENSMUSG00000018707","Dync1h1","9930018I23Rik|AI894280|DHC1|DHC1a|DNCL|Dnchc1|Dnec1|Dnecl|Loa|MAP1C|P22|Swl|mKIAA0325","dynein cytoplasmic 1 heavy chain 1","protein-coding"]
[601,"chr11",98348132,98349203,"+",0,"NA","5' UTR (NM_144828, exon 1 of 7)","5' UTR (NM_144828, exon 1 of 7)",261,"NM_144828",19049,"Mm.45372","NM_144828","ENSMUSG00000061718","Ppp1r1b","AU040756|DARPP-32|Darpp32","protein phosphatase 1, regulatory (inhibitor) subunit 1B","protein-coding"]
[1739,"chr19",45014872,45015419,"+",0,"NA","promoter-TSS (NM_001130525)","promoter-TSS (NM_001130525)",-31,"NM_145503",226154,"Mm.28204","NM_145503","ENSMUSG00000035342","Lzts2","BC014695|LAPSER1|mKIAA1813","leucine zipper, putative tumor suppressor 2","protein-coding"]
[231,"chr10",59322911,59323946,"+",0,"NA","5' UTR (NM_001316371, exon 1 of 15)","5' UTR (NM_001316371, exon 1 of 15)",132,"NM_001316370",18451,"Mm.2212","NM_011030","ENSMUSG00000019916","P4ha1","AL022634|P4ha","procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide","protein-coding"]
[1610,"chr18",75367307,75367999,"+",0,"NA","5' UTR (NM_001042660, exon 1 of 4)","5' UTR (NM_001042660, exon 1 of 4)",288,"NM_001042660",17131,"Mm.34407","NM_008543","ENSMUSG00000025880","Smad7","Madh7","SMAD family member 7","protein-coding"]
[779,"chr12",83950510,83951822,"+",0,"NA","exon (NM_023633, exon 1 of 1)","exon (NM_023633, exon 1 of 1)",558,"NM_023633",71952,"Mm.251483","NM_023633","ENSMUSG00000046791","2410016O06Rik","MAPJD|NO66","RIKEN cDNA 2410016O06 gene","protein-coding"]
[551,"chr11",80300592,80301868,"+",0,"NA","exon (NM_139228, exon 1 of 9)","exon (NM_139228, exon 1 of 9)",318,"NM_139228",246104,"Mm.194148","NM_139228","ENSMUSG00000017692","Rhbdl3","AI847581|Rhbdl4|Rhomr1|Vrho","rhomboid, veinlet-like 3 (Drosophila)","protein-coding"]
[343,"chr10",111164422,111165388,"+",0,"NA","5' UTR (NM_175489, exon 1 of 24)","5' UTR (NM_175489, exon 1 of 24)",103,"NM_175489",237542,"Mm.220204","NM_175489","ENSMUSG00000020189","Osbpl8","AA536976|AA536995|C730029P18Rik|D330025H14Rik|ORP-8","oxysterol binding protein-like 8","protein-coding"]
[504,"chr11",72314006,72314672,"+",0,"NA","promoter-TSS (NM_001099688)","promoter-TSS (NM_001099688)",-105,"NM_001099688",628100,"Mm.390365","NM_001099688","ENSMUSG00000070388","Fbxo39","1700010H23Rik","F-box protein 39","protein-coding"]
[981,"chr14",25693911,25694557,"+",0,"NA","promoter-TSS (NM_134084)","promoter-TSS (NM_134084)",64,"NM_134084",105675,"Mm.41656","NM_134084","ENSMUSG00000021868","Ppif","AW457192|CyP-D|CyP-F|CypD|PPIase","peptidylprolyl isomerase F (cyclophilin F)","protein-coding"]
[697,"chr11",120466807,120468050,"+",0,"NA","promoter-TSS (NM_008244)","promoter-TSS (NM_008244)",172,"NM_197995",70317,"Mm.485046","NM_197995",null,"Arl16","2600005N12Rik","ADP-ribosylation factor-like 16","protein-coding"]
[2823,"chr6",113471271,113471953,"+",0,"NA","TTS (NM_145826)","TTS (NM_145826)",157,"NM_134159",171095,"Mm.213397","NM_134159","ENSMUSG00000030281","Il17rc","1110025H02Rik|Gm19850|IL-17RC|IL17-RC|IL17-RL|Il17rl","interleukin 17 receptor C","protein-coding"]
[3001,"chr7",101393717,101394626,"+",0,"NA","promoter-TSS (NM_198096)","promoter-TSS (NM_198096)",-217,"NM_198096",69710,"Mm.277687","NM_027180","ENSMUSG00000032812","Arap1","2410002L19Rik|Centd2|mKIAA0782","ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1","protein-coding"]
[3177,"chr8",72318835,72319318,"+",0,"NA","promoter-TSS (NM_008452)","promoter-TSS (NM_008452)",14,"NM_008452",16598,"Mm.26938","NM_008452","ENSMUSG00000055148","Klf2","Lklf","Kruppel-like factor 2 (lung)","protein-coding"]
[3387,"chr9",58128854,58129825,"+",0,"NA","promoter-TSS (NM_009291)","promoter-TSS (NM_009291)",-10,"NM_009291",20897,"Mm.10801","NM_009291","ENSMUSG00000032327","Stra6","AI891933","stimulated by retinoic acid gene 6","protein-coding"]
[857,"chr13",18948138,18949043,"+",0,"NA","intron (NM_175007, intron 1 of 20)","CpG",239,"NM_001289546",218038,"Mm.101650","NM_175007","ENSMUSG00000021314","Amph","-","amphiphysin","protein-coding"]
[1010,"chr14",34894413,34895138,"+",0,"NA","TTS (NR_029774)","TTS (NR_029774)",166,"NR_029774",723847,null,"NR_029774","ENSMUSG00000065481","Mir346","Mirn346|mir-346|mmu-mir-346","microRNA 346","ncRNA"]
[707,"chr11",120782736,120784272,"+",0,"NA","promoter-TSS (NM_001177874)","promoter-TSS (NM_001177874)",700,"NM_009053",19719,"Mm.871","NM_009053","ENSMUSG00000025158","Rfng","-","RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase","protein-coding"]
[1966,"chr2",128126832,128128400,"+",0,"NA","promoter-TSS (NM_001284410)","promoter-TSS (NM_001284410)",41,"NM_001284410",12125,"Mm.141083","NM_009754","ENSMUSG00000027381","Bcl2l11","1500006F24Rik|Bim|Bod|bcl2-L-11","BCL2-like 11 (apoptosis facilitator)","protein-coding"]
[1665,"chr19",6844355,6845133,"+",0,"NA","3' UTR (NM_001081291, exon 27 of 27)","3' UTR (NM_001081291, exon 27 of 27)",-4117,"NM_019924",56613,"Mm.20914","NM_019924","ENSMUSG00000024952","Rps6ka4","1110069D02Rik|90kDa|AI848992|Msk2|mMSK2","ribosomal protein S6 kinase, polypeptide 4","protein-coding"]
[3310,"chr8",125669614,125670705,"+",0,"NA","exon (NM_028908, exon 1 of 1)","exon (NM_028908, exon 1 of 1)",341,"NM_028908",74393,"Mm.41709","NM_028908","ENSMUSG00000050930","Map10","4933403G14Rik|AI835009|mKIAA1383","microtubule-associated protein 10","protein-coding"]
[261,"chr10",77978083,77979012,"+",0,"NA","promoter-TSS (NM_026431)","promoter-TSS (NM_026431)",-103,"NM_026431",67884,"Mm.297512","NM_026431","ENSMUSG00000020284","1810043G02Rik","AV026620|D10Jhu13e","RIKEN cDNA 1810043G02 gene","protein-coding"]
[1782,"chr2",14603903,14604726,"+",0,"NA","promoter-TSS (NM_023116)","promoter-TSS (NM_023116)",8,"NM_023116",12296,"Mm.313930","NM_023116","ENSMUSG00000057914","Cacnb2","AW060387|CAB2|Cavbeta2|Cchb2","calcium channel, voltage-dependent, beta 2 subunit","protein-coding"]
[2698,"chr5",140759382,140760192,"+",0,"NA","TTS (NM_010302)","TTS (NM_010302)",35660,"NM_173405",231842,"Mm.491298","NM_173405","ENSMUSG00000050022","Amz1","5330426I05|6530401C20Rik","archaelysin family metallopeptidase 1","protein-coding"]
[2439,"chr4",152185654,152186834,"+",0,"NA","exon (NM_001146057, exon 1 of 9)","exon (NM_001146057, exon 1 of 9)",110,"NM_001146057",70025,"Mm.296191","NM_133348","ENSMUSG00000028937","Acot7","2410041A17Rik|Ach1|Act|Bach|CTE-IIa|Cte-II|Lach1","acyl-CoA thioesterase 7","protein-coding"]
[2252,"chr4",41569164,41569953,"+",0,"NA","promoter-TSS (NM_001159583)","promoter-TSS (NM_001159583)",-31,"NM_027993",71901,"Mm.39215","NM_027993","ENSMUSG00000028439","Fam219a","2310028H24Rik","family with sequence similarity 219, member A","protein-coding"]
[2506,"chr5",33430523,33431977,"+",0,"NA","exon (NM_011320, exon 2 of 2)","exon (NM_011320, exon 2 of 2)",2840,"NM_011320",672284,null,"NM_011320","ENSMUSG00000029112","Nkx1-1","Nkx-1.1|Sax2","NK1 transcription factor related, locus 1 (Drosophila)","protein-coding"]
[3403,"chr9",65460749,65461462,"+",0,"NA","5' UTR (NM_138584, exon 1 of 9)","5' UTR (NM_138584, exon 1 of 9)",168,"NM_138584",27965,"Mm.272475","NM_138584","ENSMUSG00000032388","Spg21","ACP33|BM-019|C78576|D9Wsu18e|GL010|MAST","spastic paraplegia 21 homolog (human)","protein-coding"]
[321,"chr10",88731214,88731967,"+",0,"NA","promoter-TSS (NM_001037166)","promoter-TSS (NM_001037166)",176,"NM_025859",104303,"Mm.291247","NM_025859",null,"Arl1","2310008D22Rik|AU019749","ADP-ribosylation factor-like 1","protein-coding"]
[792,"chr12",86421423,86422060,"+",0,"NA","promoter-TSS (NM_011934)","promoter-TSS (NM_011934)",97,"NM_011934",26380,"Mm.235550","NM_011934","ENSMUSG00000021255","Esrrb","Err2|Errb|Estrrb|Nr3b2","estrogen related receptor, beta","protein-coding"]
[3209,"chr8",88137699,88138643,"+",0,"NA","promoter-TSS (NR_106039)","promoter-TSS (NR_106039)",-35,"NR_106039",102465649,null,"NR_106039","ENSMUSG00000099080","Mir7071","Gm27623|mmu-mir-7071","microRNA 7071","ncRNA"]
[3122,"chr8",14095383,14096826,"+",0,"NA","5' UTR (NM_172910, exon 1 of 16)","5' UTR (NM_172910, exon 1 of 16)",229,"NM_172910",244310,"Mm.404697","NM_172910","ENSMUSG00000047495","Dlgap2","6430596N04Rik|DAP2|Sapap2","discs, large (Drosophila) homolog-associated protein 2","protein-coding"]
[2896,"chr7",27607287,27608003,"+",0,"NA","intron (NM_007434, intron 1 of 13)","intron (NM_007434, intron 1 of 13)",1785,"NM_007434",11652,"Mm.177194","NM_007434","ENSMUSG00000004056","Akt2","2410016A19Rik|AW554154|PKB|PKBbeta","thymoma viral proto-oncogene 2","protein-coding"]
[1079,"chr14",122534105,122534771,"+",0,"NA","exon (NM_144844, exon 1 of 24)","exon (NM_144844, exon 1 of 24)",110,"NM_144844",110821,"Mm.23876","NM_144844","ENSMUSG00000041650","Pcca","C79630","propionyl-Coenzyme A carboxylase, alpha polypeptide","protein-coding"]
[1248,"chr16",11253211,11254405,"+",0,"NA","TTS (NR_035466)","TTS (NR_035466)",517,"NM_001130008",14852,"Mm.325827","NM_146066",null,"Gspt1","AI314175|AI326449|AV307676|C79774|G1st|Gst-1","G1 to S phase transition 1","protein-coding"]
[2422,"chr4",148140303,148141163,"+",0,"NA","5' UTR (NM_027985, exon 1 of 8)","5' UTR (NM_027985, exon 1 of 8)",243,"NM_027985",71890,"Mm.9648","NM_027985","ENSMUSG00000029003","Mad2l2","2310033C13Rik|G1-453-4|MAD2B|REV7|repro22","MAD2 mitotic arrest deficient-like 2","protein-coding"]
[3407,"chr9",66945813,66946855,"+",0,"NA","intron (NM_001311101, intron 1 of 4)","CpG",258,"NM_026467",67941,"Mm.30120","NM_026467","ENSMUSG00000036781","Rps27l","1810034D23Rik","ribosomal protein S27-like","protein-coding"]
[3368,"chr9",50767885,50768740,"+",0,"NA","promoter-TSS (NM_198675)","promoter-TSS (NM_198675)",74,"NM_198675",382137,"Mm.390169","NM_198675",null,"Fdxacb1","D630004A14Rik","ferredoxin-fold anticodon binding domain containing 1","protein-coding"]
[1590,"chr18",62922112,62922888,"+",0,"NA","5' UTR (NM_133237, exon 1 of 5)","5' UTR (NM_133237, exon 1 of 5)",173,"NM_133237",494504,"Mm.391102","NM_133237","ENSMUSG00000071847","Apcdd1","AB023957|AU041258|Drapc1|EIG180","adenomatosis polyposis coli down-regulated 1","protein-coding"]
[2401,"chr4",138454953,138455531,"+",0,"NA","promoter-TSS (NM_025451)","promoter-TSS (NM_025451)",94,"NM_025451",66259,"Mm.41603","NM_025451","ENSMUSG00000046447","Camk2n1","1810006K23Rik|AI848599|AI891706","calcium/calmodulin-dependent protein kinase II inhibitor 1","protein-coding"]
[1652,"chr19",6046726,6047624,"+",0,"NA","promoter-TSS (NM_001164709)","promoter-TSS (NM_001164709)",30,"NM_001164709",74126,"Mm.149870","NM_028769","ENSMUSG00000024807","Syvn1","1200010C09Rik|AW211966|C85322|D530017H19Rik|Hrd1","synovial apoptosis inhibitor 1, synoviolin","protein-coding"]
[1516,"chr17",84957961,84958728,"+",0,"NA","promoter-TSS (NR_027930)","promoter-TSS (NR_027930)",343,"NM_001159496",19043,"Mm.249695","NM_011151","ENSMUSG00000061130","Ppm1b","PP2CB","protein phosphatase 1B, magnesium dependent, beta isoform","protein-coding"]
[2462,"chr4",156203276,156204145,"+",0,"NA","non-coding (NR_030671, exon 1 of 1)","non-coding (NR_030671, exon 1 of 1)",426,"NR_030671",100382,"Mm.461024","NR_030671",null,"AW011738","-","expressed sequence AW011738","ncRNA"]
[2053,"chr2",167537762,167538398,"+",0,"NA","promoter-TSS (NM_011427)","promoter-TSS (NM_011427)",-147,"NM_011427",20613,"Mm.2093","NM_011427","ENSMUSG00000042821","Snai1","AI194338|Sna|Sna1|Snail|Snail1","snail family zinc finger 1","protein-coding"]
[924,"chr13",73603691,73604470,"+",0,"NA","promoter-TSS (NM_146047)","promoter-TSS (NM_146047)",78,"NM_146047",218335,"Mm.30099","NM_146047","ENSMUSG00000021610","Clptm1l","C130052I12Rik|Crr9","CLPTM1-like","protein-coding"]
[2933,"chr7",45724920,45725934,"+",0,"NA","exon (NM_027055, exon 1 of 1)","exon (NM_027055, exon 1 of 1)",389,"NM_027055",69363,"Mm.45607","NM_027055","ENSMUSG00000070563","Spaca4","1700008E09Rik|AV043694|Samp14","sperm acrosome associated 4","protein-coding"]
[2301,"chr4",99655885,99657150,"+",0,"NA","5' UTR (NM_010425, exon 1 of 1)","5' UTR (NM_010425, exon 1 of 1)",218,"NM_010425",15221,"Mm.4758","NM_010425","ENSMUSG00000067261","Foxd3","CWH3|Genesis|Hfh2","forkhead box D3","protein-coding"]
[760,"chr12",73907340,73908843,"+",0,"NA","5' UTR (NM_010431, exon 1 of 15)","5' UTR (NM_010431, exon 1 of 15)",224,"NM_001313919",15251,"Mm.3879","NM_010431","ENSMUSG00000021109","Hif1a","AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78","hypoxia inducible factor 1, alpha subunit","protein-coding"]
[863,"chr13",24831654,24832306,"+",0,"NA","promoter-TSS (NM_025790)","promoter-TSS (NM_025790)",321,"NM_019551",56196,"Mm.427162","NM_019551","ENSMUSG00000035958","Tdp2","D13Ertd656e|Ttrap","tyrosyl-DNA phosphodiesterase 2","protein-coding"]
[2481,"chr5",25100506,25101356,"+",0,"NA","promoter-TSS (NR_027851)","promoter-TSS (NR_027851)",-44,"NR_027851",67261,"Mm.461781","NM_026059","ENSMUSG00000043833","2900005J15Rik","-","RIKEN cDNA 2900005J15 gene","ncRNA"]
[531,"chr11",77515052,77516130,"+",0,"NA","exon (NM_026185, exon 1 of 2)","exon (NM_026185, exon 1 of 2)",474,"NM_026185",67477,"Mm.432526","NM_026185","ENSMUSG00000000686","Abhd15","1300007F04Rik","abhydrolase domain containing 15","protein-coding"]
[2027,"chr2",158767804,158768639,"+",0,"NA","exon (NM_027975, exon 1 of 4)","exon (NM_027975, exon 1 of 4)",122,"NM_027975",71878,"Mm.85162","NM_027975","ENSMUSG00000027654","Fam83d","2310007D09Rik|BB104611","family with sequence similarity 83, member D","protein-coding"]
[2469,"chr5",19227030,19227864,"+",0,"NA","promoter-TSS (NR_102341)","promoter-TSS (NR_102341)",401,"NM_001170746",50791,"Mm.332231","NM_015823","ENSMUSG00000040003","Magi2","AIP-1|Acvri1|Acvrinp1|Acvrip1|Magi-2|S-SCAM|mKIAA0705","membrane associated guanylate kinase, WW and PDZ domain containing 2","protein-coding"]
[3317,"chr9",13749022,13749697,"+",0,"NA","exon (NM_023858, exon 1 of 15)","exon (NM_023858, exon 1 of 15)",178,"NR_024025",77116,"Mm.210405","NM_023858","ENSMUSG00000031918","Mtmr2","6030445P13Rik","myotubularin related protein 2","protein-coding"]
[172,"chr1",191025169,191026725,"+",0,"NA","exon (NM_198025, exon 1 of 1)","exon (NM_198025, exon 1 of 1)",243,"NM_001081259",226844,"Mm.134053","NM_198025","ENSMUSG00000066595","Mfsd7b","9630055N22Rik|FLVCR|Flvcr1","major facilitator superfamily domain containing 7B","protein-coding"]
[1745,"chr19",46304607,46305760,"+",0,"NA","promoter-TSS (NM_019408)","promoter-TSS (NM_019408)",446,"NM_001177369",18034,"Mm.102365","NM_019408","ENSMUSG00000025225","Nfkb2","NF-kappaB2|lyt|p49|p49/p100|p50B|p52","nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100","protein-coding"]
[2594,"chr5",114130280,114131590,"+",0,"NA","promoter-TSS (NM_011677)","promoter-TSS (NM_011677)",-221,"NM_011677",22256,"Mm.1393","NM_011677","ENSMUSG00000029591","Ung","UNG1|UNG2","uracil DNA glycosylase","protein-coding"]
[2111,"chr3",54755121,54755950,"+",0,"NA","promoter-TSS (NM_019483)","promoter-TSS (NM_019483)",-47,"NM_019483",55994,"Mm.244353","NM_019483","ENSMUSG00000027796","Smad9","MADH6|Madh8|Madh9|Smad8","SMAD family member 9","protein-coding"]
[1366,"chr17",23575659,23577064,"+",0,"NA","exon (NM_011747, exon 6 of 6)","exon (NM_011747, exon 6 of 6)",-12135,"NM_001033496",449521,"Mm.268582","NM_001033496","ENSMUSG00000071256","Zfp213","BC038178|D17Ertd197e","zinc finger protein 213","protein-coding"]
[223,"chr10",45066814,45067669,"+",0,"NA","promoter-TSS (NM_011156)","promoter-TSS (NM_011156)",27,"NM_011156",19072,"Mm.37294","NM_011156","ENSMUSG00000019849","Prep","AI047692|AI450383|D10Wsu136e|PEP|Pop","prolyl endopeptidase","protein-coding"]
[2124,"chr3",65659101,65659939,"+",0,"NA","TTS (NR_106200)","TTS (NR_106200)",232,"NR_106200",102465905,null,"NR_106200","ENSMUSG00000098944","Mir8120","Gm27637|mmu-mir-8120","microRNA 8120","ncRNA"]
[721,"chr12",4916960,4918127,"+",0,"NA","5' UTR (NM_001099628, exon 1 of 31)","5' UTR (NM_001099628, exon 1 of 31)",190,"NM_001099628",320817,"Mm.210966","NM_001099628",null,"Atad2b","1110014E10Rik|BC032887|C79189|D530031C13Rik","ATPase family, AAA domain containing 2B","protein-coding"]
[1897,"chr2",71873147,71873659,"+",0,"NA","exon (NM_172665, exon 1 of 11)","exon (NM_172665, exon 1 of 11)",179,"NM_172665",228026,"Mm.34411","NM_172665","ENSMUSG00000006494","Pdk1","B830012B01|D530020C15Rik","pyruvate dehydrogenase kinase, isoenzyme 1","protein-coding"]
[3482,"chr9",111117837,111118818,"+",0,"NA","5' UTR (NM_027742, exon 1 of 14)","5' UTR (NM_027742, exon 1 of 14)",216,"NM_001164838",71268,"Mm.302287","NM_027742","ENSMUSG00000032497","Lrrfip2","5133400F20Rik|AI850587","leucine rich repeat (in FLII) interacting protein 2","protein-coding"]
[1043,"chr14",63943135,63944303,"+",0,"NA","promoter-TSS (NM_011446)","promoter-TSS (NM_011446)",13,"NM_011446",20680,"Mm.42162","NM_011446","ENSMUSG00000063060","Sox7","-","SRY (sex determining region Y)-box 7","protein-coding"]
[1255,"chr16",13902462,13903451,"+",0,"NA","promoter-TSS (NM_001289562)","promoter-TSS (NM_001289562)",189,"NM_001039533",94184,"Mm.171484","NM_053181","ENSMUSG00000022680","Pdxdc1","2210010A19Rik|AA415817|Kiaa0251-hp","pyridoxal-dependent decarboxylase domain containing 1","protein-coding"]
[2660,"chr5",134099469,134100049,"+",0,"NA","promoter-TSS (NM_030719)","promoter-TSS (NM_030719)",11,"NM_030719",80909,"Mm.45218","NM_030719",null,"Gatsl2","7530428J21Rik|AW742413|Gats|Gatsl1","GATS protein-like 2","protein-coding"]
[669,"chr11",115899519,115900289,"+",0,"NA","promoter-TSS (NM_183259)","promoter-TSS (NM_183259)",-235,"NM_183259",66528,"Mm.275740","NM_183259","ENSMUSG00000048442","Smim5","2210020M01Rik","small integral membrane protein 5","protein-coding"]
[282,"chr10",80053224,80054415,"+",0,"NA","promoter-TSS (NM_001037741)","promoter-TSS (NM_001037741)",-200,"NM_001037741",625249,"Mm.332810","NM_008162","ENSMUSG00000075706","Gpx4","GPx-4|GSHPx-4|PHGPx|mtPHGPx|snGPx","glutathione peroxidase 4","protein-coding"]
[420,"chr11",50024829,50025731,"+",0,"NA","promoter-TSS (NM_001290750)","promoter-TSS (NM_001290750)",-51,"NM_021540",59044,"Mm.359004","NM_021540","ENSMUSG00000020376","Rnf130","2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP","ring finger protein 130","protein-coding"]
[1852,"chr2",32362618,32363547,"+",0,"NA","promoter-TSS (NM_028412)","promoter-TSS (NM_028412)",72,"NM_001252536",68379,"Mm.170508","NM_028412","ENSMUSG00000039205","Ciz1","0610038H21Rik|2900056O04Rik|LSFR1|ZNF356","CDKN1A interacting zinc finger protein 1","protein-coding"]
[3449,"chr9",105395130,105395760,"+",0,"NA","promoter-TSS (NM_025651)","promoter-TSS (NM_025651)",53,"NM_025651",66595,"Mm.84941","NM_025651","ENSMUSG00000032567","Aste1","1100001A21Rik|AV006403","asteroid homolog 1 (Drosophila)","protein-coding"]
[639,"chr11",104550101,104550826,"+",0,"NA","promoter-TSS (NM_010858)","promoter-TSS (NM_010858)",157,"NM_001285990",217232,"Mm.89845","NM_145436","ENSMUSG00000020687","Cdc27","AI452358|APC3|BC023187","cell division cycle 27","protein-coding"]
[989,"chr14",29978275,29978867,"+",0,"NA","exon (NM_027493, exon 1 of 13)","exon (NM_027493, exon 1 of 13)",234,"NM_027493",56249,"Mm.215110","NM_027493","ENSMUSG00000015971","Actr8","5730542K05Rik|ARP8","ARP8 actin-related protein 8","protein-coding"]
[1505,"chr17",72917767,72918508,"+",0,"NA","promoter-TSS (NM_029999)","promoter-TSS (NM_029999)",-168,"NM_029999",77889,"Mm.154109","NM_029999","ENSMUSG00000024063","Lbh","1810009F10Rik|6720416L16Rik","limb-bud and heart","protein-coding"]
[2372,"chr4",132638699,132639765,"+",0,"NA","intron (NM_210071, intron 1 of 16)","CpG",186,"NM_010166",14050,"Mm.227733","NM_010166","ENSMUSG00000028886","Eya3","AI844637","eyes absent 3 homolog (Drosophila)","protein-coding"]
[1348,"chr16",94569748,94571267,"+",0,"NA","promoter-TSS (NM_001113389)","promoter-TSS (NM_001113389)",301,"NM_007890",13548,"Mm.310973","NM_007890","ENSMUSG00000022897","Dyrk1a","2310043O08Rik|D16Ertd272e|D16Ertd493e|Dyrk|ENSMUSG00000074897|Gm10783|Mnbh|Mp86|mmb","dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a","protein-coding"]
[2945,"chr7",55793903,55794476,"+",0,"NA","promoter-TSS (NM_146190)","promoter-TSS (NM_146190)",41,"NM_146190",233276,"Mm.284306","NM_146190","ENSMUSG00000033790","Tubgcp5","B130010C12Rik|GCP5|mKIAA1899","tubulin, gamma complex associated protein 5","protein-coding"]
[2248,"chr4",40142834,40143973,"+",0,"NA","5' UTR (NM_007386, exon 1 of 21)","5' UTR (NM_007386, exon 1 of 21)",138,"NM_007386",11428,"Mm.331547","NM_007386","ENSMUSG00000028405","Aco1","Aco-1|Irebp|Irp1","aconitase 1","protein-coding"]
[577,"chr11",88999084,89000094,"+",0,"NA","exon (NM_009546, exon 1 of 9)","exon (NM_009546, exon 1 of 9)",186,"NM_009546",217069,"Mm.248445","NM_009546","ENSMUSG00000000275","Trim25","AA960166|AL022677|EFP|Zfp147","tripartite motif-containing 25","protein-coding"]
[1137,"chr15",76368514,76369736,"+",0,"NA","exon (NM_021555, exon 1 of 6)","exon (NM_021555, exon 1 of 6)",227,"NM_021555",59053,"Mm.133202","NM_021555","ENSMUSG00000022554","Hgh1","Brp16|D15Ertd741e|Fam203a|MNCb-5873","HGH1 homolog","protein-coding"]
[3511,"chr9",124422825,124423613,"+",0,"NA","promoter-TSS (NR_102721)","promoter-TSS (NR_102721)",-32,"NR_027950",75135,"Mm.476814","NR_015516",null,"4930526I15Rik","1600027J15Rik","RIKEN cDNA 4930526I15 gene","ncRNA"]
[2809,"chr6",91978866,91979519,"+",0,"NA","Intergenic","Intergenic",-7918,"NM_172731",232237,"Mm.295740","NM_172731","ENSMUSG00000034037","Fgd5","C330025N11Rik|ZFYVE23|mFLJ00274","FYVE, RhoGEF and PH domain containing 5","protein-coding"]
[1227,"chr15",101412096,101412824,"+",0,"NA","promoter-TSS (NM_033073)","promoter-TSS (NM_033073)",57,"NM_033073",110310,"Mm.486285","NM_033073",null,"Krt7","D15Wsu77e|K7|Krt2-7","keratin 7","protein-coding"]
[3504,"chr9",122351205,122352269,"+",0,"NA","5' UTR (NM_026179, exon 1 of 7)","5' UTR (NM_026179, exon 1 of 7)",121,"NM_026179",67469,"Mm.280254","NM_026179","ENSMUSG00000032540","Abhd5","1300003D03Rik|2010002J10Rik|CDS|CGI-58|IECN5|NCIE2","abhydrolase domain containing 5","protein-coding"]
[1417,"chr17",28328002,28328950,"+",0,"NA","promoter-TSS (NM_011287)","promoter-TSS (NM_011287)",5,"NM_011287",19896,"Mm.336955","NM_011287","ENSMUSG00000037805","Rpl10a","CsA-19|Nedd6","ribosomal protein L10A","protein-coding"]
[216,"chr10",41887095,41887884,"+",0,"NA","promoter-TSS (NM_001013370)","promoter-TSS (NM_001013370)",50,"NM_001013370",140742,"Mm.139418","NM_001013370","ENSMUSG00000038332","Sesn1","1110002G11Rik|AU044290|Pa26|Sest1","sestrin 1","protein-coding"]
[3381,"chr9",57130495,57131329,"+",0,"NA","non-coding (NR_102289, exon 1 of 2)","non-coding (NR_102289, exon 1 of 2)",135,"NM_028636",73744,"Mm.30110","NM_028636","ENSMUSG00000032295","Man2c1","1110025H24Rik","mannosidase, alpha, class 2C, member 1","protein-coding"]
[852,"chr13",8885397,8886217,"+",0,"NA","5' UTR (NM_145360, exon 1 of 5)","5' UTR (NM_145360, exon 1 of 5)",201,"NM_145360",319554,"Mm.29847","NM_145360","ENSMUSG00000058258","Idi1","4832416K17Rik","isopentenyl-diphosphate delta isomerase","protein-coding"]
[3351,"chr9",44379066,44380304,"+",0,"NA","intron (NM_021395, intron 1 of 25)","CpG",195,"NM_021395",12282,"Mm.116721","NM_021395","ENSMUSG00000032115","Hyou1","AI415631|CBP-140|Cab140|Grp170|Orp150","hypoxia up-regulated 1","protein-coding"]
[643,"chr11",106083749,106085204,"+",0,"NA","promoter-TSS (NM_011947)","promoter-TSS (NM_011947)",-426,"NM_011947",26406,"Mm.27041","NM_011947","ENSMUSG00000020700","Map3k3","AW548911|MAPKKK3|Mekk3|mKIAA4031","mitogen-activated protein kinase kinase kinase 3","protein-coding"]
[3478,"chr9",109095407,109096059,"+",0,"NA","intron (NM_172775, intron 1 of 37)","CpG",297,"NM_172775",235611,"Mm.53862","NM_172775","ENSMUSG00000053646","Plxnb1","2900002G15Rik|AU042020|mKIAA0407","plexin B1","protein-coding"]
[1951,"chr2",120976983,120977958,"+",0,"NA","exon (NM_175285, exon 1 of 14)","exon (NM_175285, exon 1 of 14)",408,"NM_175285",96957,"Mm.315212","NM_175285","ENSMUSG00000054484","Tmem62","B830009D23Rik|C77355","transmembrane protein 62","protein-coding"]
[2766,"chr6",56714719,56715446,"+",0,"NA","5' UTR (NM_030235, exon 1 of 16)","5' UTR (NM_030235, exon 1 of 16)",177,"NM_030235",78937,"Mm.105343","NM_030235","ENSMUSG00000029787","Avl9","5830411G16Rik|D730049P16Rik|mKIAA0241","AVL9 homolog (S. cerevisiase)","protein-coding"]
[1120,"chr15",68928294,68929059,"+",0,"NA","5' UTR (NM_010158, exon 1 of 9)","5' UTR (NM_010158, exon 1 of 9)",256,"NM_010158",13992,"Mm.17964","NM_010158","ENSMUSG00000022332","Khdrbs3","Etle|SLM-2|Salp|Slm2|T-STAR","KH domain containing, RNA binding, signal transduction associated 3","protein-coding"]
[2928,"chr7",45180938,45181998,"+",0,"NA","intron (NM_053256, intron 2 of 2)","intron (NM_053256, intron 2 of 2)",473,"NM_053256",114640,"Mm.207078","NM_053256","ENSMUSG00000038300","Pth2","Tifp39|Tip39","parathyroid hormone 2","protein-coding"]
[1475,"chr17",46890523,46891690,"+",0,"NA","exon (NM_178385, exon 1 of 1)","exon (NM_178385, exon 1 of 1)",485,"NM_178385",72726,"Mm.33780","NM_178385","ENSMUSG00000036430","Tbcc","2810055C19Rik","tubulin-specific chaperone C","protein-coding"]
[1794,"chr2",25180429,25182025,"+",0,"NA","exon (NM_025980, exon 1 of 1)","exon (NM_025980, exon 1 of 1)",469,"NM_025980",67122,"Mm.46539","NM_025980","ENSMUSG00000078202","Nrarp","2700054M22Rik","Notch-regulated ankyrin repeat protein","protein-coding"]
[1187,"chr15",84950765,84951680,"+",0,"NA","TTS (NR_037206)","TTS (NR_037206)",401,"NR_037206",100526461,null,"NR_037206","ENSMUSG00000080441","Mir1249","mir-1249|mmu-mir-1249","microRNA 1249","ncRNA"]
[2193,"chr3",126596873,126597805,"+",0,"NA","5' UTR (NM_001025438, exon 1 of 19)","5' UTR (NM_001025438, exon 1 of 19)",388,"NM_023813",108058,"Mm.255822","NM_023813","ENSMUSG00000053819","Camk2d","2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII","calcium/calmodulin-dependent protein kinase II, delta","protein-coding"]
[3522,"chrX",161716999,161717695,"+",0,"NA","promoter-TSS (NM_198409)","promoter-TSS (NM_198409)",-206,"NM_198409",24004,"Mm.328503","NM_198409","ENSMUSG00000043518","Rai2","3f8","retinoic acid induced 2","protein-coding"]
[2636,"chr5",123907227,123907854,"+",0,"NA","intron (NM_026603, intron 1 of 7)","intron (NM_026603, intron 1 of 7)",265,"NM_026603",68184,"Mm.28549","NM_026603","ENSMUSG00000023106","Denr","1500003K04Rik","density-regulated protein","protein-coding"]
[2968,"chr7",80246175,80246734,"+",0,"NA","promoter-TSS (NM_177765)","promoter-TSS (NM_177765)",78,"NM_177765",269954,"Mm.276780","NM_177765","ENSMUSG00000045467","Ttll13","1700111A04Rik|4921538O11|BC024578","tubulin tyrosine ligase-like family, member 13","protein-coding"]
[2092,"chr3",32510126,32511163,"+",0,"NA","promoter-TSS (NM_144519)","promoter-TSS (NM_144519)",52,"NM_144519",67778,"Mm.285620","NM_144519","ENSMUSG00000027667","Zfp639","6230400O18Rik|ANC-2H01|ZASC1|Znf639","zinc finger protein 639","protein-coding"]
[676,"chr11",116918572,116919720,"+",0,"NA","5' UTR (NM_172948, exon 1 of 17)","5' UTR (NM_172948, exon 1 of 17)",283,"NM_172948",268510,"Mm.35141","NM_172948","ENSMUSG00000043857","Mgat5b","C330018B01|GnT-IX|mGnTVB","mannoside acetylglucosaminyltransferase 5, isoenzyme B","protein-coding"]
[1251,"chr16",13256069,13256735,"+",0,"NA","promoter-TSS (NM_001122667)","promoter-TSS (NM_001122667)",-79,"NM_001122667",239719,"Mm.270643","NM_153588","ENSMUSG00000009569","Mkl2","ENSMUSG00000075401|Gt4-1|MRTF-B|Mrtfb|mKIAA1243","MKL/myocardin-like 2","protein-coding"]
[277,"chr10",79970617,79971422,"+",0,"NA","exon (NM_130455, exon 1 of 9)","exon (NM_130455, exon 1 of 9)",295,"NM_130455",170483,"Mm.391566","NM_130455","ENSMUSG00000035745","Grin3b","GluN3B|NR3B","glutamate receptor, ionotropic, NMDA3B","protein-coding"]
[2456,"chr4",155868649,155869974,"+",0,"NA","promoter-TSS (NM_028020)","promoter-TSS (NM_028020)",129,"NM_024472",79554,"Mm.25556","NM_024472","ENSMUSG00000029073","Cptp","Gltpd1","ceramide-1-phosphate transfer protein","protein-coding"]
[3191,"chr8",83972213,83973355,"+",0,"NA","promoter-TSS (NM_008854)","promoter-TSS (NM_008854)",-194,"NM_008854",18747,"Mm.19111","NM_008854","ENSMUSG00000005469","Prkaca","PKCD|Pkaca","protein kinase, cAMP dependent, catalytic, alpha","protein-coding"]
[1192,"chr15",86213902,86215114,"+",0,"NA","promoter-TSS (NM_145476)","promoter-TSS (NM_145476)",49,"NM_145476",223754,"Mm.28904","NM_145476","ENSMUSG00000051864","Tbc1d22a","BC023106|D15Ertd781e","TBC1 domain family, member 22a","protein-coding"]
[879,"chr13",43615658,43616362,"+",0,"NA","5' UTR (NM_183204, exon 1 of 2)","5' UTR (NM_183204, exon 1 of 2)",213,"NM_183204",328234,"Mm.40588","NM_183204","ENSMUSG00000044164","Rnf182","C630023L15Rik","ring finger protein 182","protein-coding"]
[3306,"chr8",124862790,124863488,"+",0,"NA","promoter-TSS (NM_025615)","promoter-TSS (NM_025615)",106,"NM_010322",14712,"Mm.29114","NM_010322","ENSMUSG00000031985","Gnpat","AU019525|D1Ertd819e|DHAPAT","glyceronephosphate O-acyltransferase","protein-coding"]
[3017,"chr7",112678837,112680106,"+",0,"NA","5' UTR (NM_009346, exon 1 of 13)","5' UTR (NM_009346, exon 1 of 13)",151,"NM_009346",21676,"Mm.24685","NM_009346","ENSMUSG00000055320","Tead1","2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1","TEA domain family member 1","protein-coding"]
[2640,"chr5",124115833,124116775,"+",0,"NA","TTS (NM_025671)","TTS (NM_025671)",196,"NM_144509",65105,"Mm.29430","NM_144509","ENSMUSG00000029404","Arl6ip4","AA408210|AA408365|Aip-4|Srp25","ADP-ribosylation factor-like 6 interacting protein 4","protein-coding"]
[2700,"chr5",142629156,142630156,"+",0,"NA","promoter-TSS (NM_178398)","promoter-TSS (NM_178398)",72,"NM_178398",74781,"Mm.29432","NM_178398",null,"Wipi2","1110018O08Rik|2510001I10Rik","WD repeat domain, phosphoinositide interacting 2","protein-coding"]
[1095,"chr15",32244783,32245406,"+",0,"NA","promoter-TSS (NR_038186)","promoter-TSS (NR_038186)",281,"NM_009154",20356,"Mm.260374","NM_009154","ENSMUSG00000022231","Sema5a","5930434A13|9130201M22Rik|AI464145|Semaf|semF","sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A","protein-coding"]
[3104,"chr8",4324576,4325610,"+",0,"NA","promoter-TSS (NR_033527)","promoter-TSS (NR_033527)",7,"NM_010485",15568,"Mm.119162","NM_010485","ENSMUSG00000040028","Elavl1","2410055N02Rik|HUR|Hua|W91709","ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)","protein-coding"]
[1183,"chr15",83779946,83780634,"+",0,"NA","intron (NM_172610, intron 1 of 6)","GC_rich|Low_complexity|Low_complexity",267,"NM_172610",223726,"Mm.36395","NM_172610","ENSMUSG00000041708","Mpped1","6230403M19|AW456965|D15Bwg0669e","metallophosphoesterase domain containing 1","protein-coding"]
[2975,"chr7",81762404,81763850,"+",0,"NA","intron (NM_025997, intron 1 of 2)","CpG",174,"NM_025997",67148,"Mm.241472","NM_025997","ENSMUSG00000038646","Fam103a1","2410047I02Rik|2610204K14Rik|RAM","family with sequence similarity 103, member A1","protein-coding"]
[1444,"chr17",34836307,34838369,"+",0,"NA","promoter-TSS (NM_019442)","promoter-TSS (NM_019442)",319,"NM_001163770",112403,"Mm.275309","NM_033613","ENSMUSG00000040482","Dxo","Dom3z|NG6","decapping exoribonuclease","protein-coding"]
[2747,"chr6",42349051,42349894,"+",0,"NA","promoter-TSS (NM_001289617)","promoter-TSS (NM_001289617)",-356,"NM_011777",22793,"Mm.282303","NM_011777","ENSMUSG00000029860","Zyx","9530098H06Rik|R75157","zyxin","protein-coding"]
[1883,"chr2",57237558,57238799,"+",0,"NA","promoter-TSS (NM_010274)","promoter-TSS (NM_010274)",-204,"NM_010274",14571,"Mm.3711","NM_010274","ENSMUSG00000026827","Gpd2","AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38","glycerol phosphate dehydrogenase 2, mitochondrial","protein-coding"]
[1846,"chr2",31812960,31813626,"+",0,"NA","TTS (NM_178887)","TTS (NM_178887)",-2713,"NM_183424",227717,"Mm.185027","NM_183424","ENSMUSG00000043102","Qrfp","P518","pyroglutamylated RFamide peptide","protein-coding"]
[2215,"chr3",146220681,146221456,"+",0,"NA","5' UTR (NM_022983, exon 1 of 3)","5' UTR (NM_022983, exon 1 of 3)",107,"NM_022983",65086,"Mm.155520","NM_022983","ENSMUSG00000036832","Lpar3","Edg7|lpA3","lysophosphatidic acid receptor 3","protein-coding"]
[2671,"chr5",136918948,136919531,"+",0,"NA","promoter-TSS (NR_015555)","promoter-TSS (NR_015555)",93,"NR_015555",66752,"Mm.135764","NR_015555","ENSMUSG00000097908","4933404O12Rik","AW494809","RIKEN cDNA 4933404O12 gene","ncRNA"]
[133,"chr1",151754883,151756111,"+",0,"NA","5' UTR (NM_001039644, exon 1 of 20)","5' UTR (NM_001039644, exon 1 of 20)",123,"NM_001311166",66967,"Mm.337691","NM_001039644","ENSMUSG00000043019","Edem3","2310050N11Rik","ER degradation enhancer, mannosidase alpha-like 3","protein-coding"]
[123,"chr1",135765604,135766740,"+",0,"NA","promoter-TSS (NM_013750)","promoter-TSS (NM_013750)",87,"NM_013750",27280,"Mm.34346","NM_013750","ENSMUSG00000041801","Phlda3","Tih1","pleckstrin homology-like domain, family A, member 3","protein-coding"]
[304,"chr10",81264130,81264928,"+",0,"NA","TTS (NM_025317)","TTS (NM_025317)",2397,"NM_025317",66047,"Mm.43397","NM_025317","ENSMUSG00000034932","Mrpl54","0610008M19Rik|D10Sut1e","mitochondrial ribosomal protein L54","protein-coding"]
[2600,"chr5",115109514,115110422,"+",0,"NA","TTS (NM_007383)","TTS (NM_007383)",300,"NM_001271590",100502825,"Mm.361657","NM_001271590",null,"Rpl37rt","Gm13826|OTTMUSG00000014624","ribosomal protein L37, retrotransposed","protein-coding"]
[2515,"chr5",35041147,35041857,"+",0,"NA","promoter-TSS (NM_019447)","promoter-TSS (NM_019447)",-7,"NM_019447",54426,"Mm.27369","NM_019447","ENSMUSG00000029102","Hgfac","HGFA","hepatocyte growth factor activator","protein-coding"]
[2417,"chr4",141746541,141747263,"+",0,"NA","exon (NM_001081408, exon 1 of 7)","exon (NM_001081408, exon 1 of 7)",227,"NM_001081408",75986,"Mm.30032","NM_001081408","ENSMUSG00000040706","Agmat","5033405N08Rik","agmatine ureohydrolase (agmatinase)","protein-coding"]
[1631,"chr19",4510328,4511081,"+",0,"NA","intron (NM_001162946, intron 1 of 20)","CpG",232,"NM_001162946",18563,"Mm.1845","NM_008797","ENSMUSG00000024892","Pcx","Pc|Pcb","pyruvate carboxylase","protein-coding"]
[1828,"chr2",29845333,29846460,"+",0,"NA","promoter-TSS (NR_029838)","promoter-TSS (NR_029838)",-169,"NR_029838",723904,null,"NR_029838","ENSMUSG00000065485","Mir219a-2","Mir219-2|Mirn219-2|mir-219a-2|mmu-mir-219a-2","microRNA 219a-2","ncRNA"]
[2605,"chr5",115326792,115327575,"+",0,"NA","promoter-TSS (NM_025573)","promoter-TSS (NM_025573)",6,"NR_036616",108014,"Mm.287826","NM_025573","ENSMUSG00000029538","Srsf9","25kDa|2610029M16Rik|SRp30c|Sfrs9","serine/arginine-rich splicing factor 9","protein-coding"]
[2294,"chr4",86874017,86874748,"+",0,"NA","promoter-TSS (NM_139306)","promoter-TSS (NM_139306)",-32,"NM_001290543",230379,"Mm.45019","NM_139306","ENSMUSG00000038007","Acer2","2410116I05Rik|Asah3l|CRG-L1|maCER2","alkaline ceramidase 2","protein-coding"]
[56,"chr1",74661681,74662241,"+",0,"NA","intron (NM_001014974, intron 1 of 19)","CpG",207,"NM_001014974",67534,"Mm.260714","NM_001014974","ENSMUSG00000033257","Ttll4","4632407P03Rik|AI451681|mKIAA0173","tubulin tyrosine ligase-like family, member 4","protein-coding"]
[1369,"chr17",23853325,23853998,"+",0,"NA","promoter-TSS (NM_027220)","promoter-TSS (NM_027220)",-111,"NM_027220",69814,"Mm.244143","NM_027220","ENSMUSG00000048992","Prss32","2010001P08Rik|mT5|tryptase-5","protease, serine 32","protein-coding"]
[3006,"chr7",105736183,105737400,"+",0,"NA","promoter-TSS (NM_010562)","promoter-TSS (NM_010562)",66,"NM_010562",16202,"Mm.274846","NM_010562","ENSMUSG00000030890","Ilk","AA511515|ESTM24","integrin linked kinase","protein-coding"]
[54,"chr1",74278589,74279632,"+",0,"NA","TTS (NM_001190444)","TTS (NM_001190444)",510,"NM_174985",227289,"Mm.246587","NM_174985","ENSMUSG00000064272","Gpbar1","BG37|GPCR|GPR131|M-BAR|TGR5","G protein-coupled bile acid receptor 1","protein-coding"]
[1151,"chr15",78439404,78440649,"+",0,"NA","TTS (NR_110357)","TTS (NR_110357)",11462,"NR_110357",72844,"Mm.390816","NM_001081367","ENSMUSG00000033287","Kctd17","2900008M13Rik|AA414907|AW742389|N28155","potassium channel tetramerisation domain containing 17","protein-coding"]
[3347,"chr9",44084412,44085440,"+",0,"NA","promoter-TSS (NM_198091)","promoter-TSS (NM_198091)",6,"NM_198091",53376,"Mm.272770","NM_016808","ENSMUSG00000032010","Usp2","B930035K21Rik|Ubp41","ubiquitin specific peptidase 2","protein-coding"]
[306,"chr10",81273162,81274183,"+",0,"NA","TTS (NM_018758)","TTS (NM_018758)",2075,"NR_037218",100526465,null,"NR_037218","ENSMUSG00000092781","Mir3057","mir-3057|mmu-mir-3057","microRNA 3057","ncRNA"]
[1204,"chr15",95790457,95791216,"+",0,"NA","promoter-TSS (NM_175344)","promoter-TSS (NM_175344)",-7,"NM_175344",105722,"Mm.38087","NM_175344","ENSMUSG00000064210","Ano6","2900059G15Rik|AA407480|AW554778|F730003B03Rik|Tmem16f","anoctamin 6","protein-coding"]
[70,"chr1",86064497,86065197,"+",0,"NA","intron (NM_027357, intron 1 of 24)","CpG",228,"NM_027357",70247,"Mm.280013","NM_027357","ENSMUSG00000026229","Psmd1","2410026J11Rik|P112|S1","proteasome (prosome, macropain) 26S subunit, non-ATPase, 1","protein-coding"]
[839,"chr12",112678425,112678929,"+",0,"NA","promoter-TSS (NM_001100460)","promoter-TSS (NM_001100460)",-163,"NM_001100460",382639,"Mm.11350","NM_001100460","ENSMUSG00000037638","Zbtb42","EG382639|Gm5188|simiRP58","zinc finger and BTB domain containing 42","protein-coding"]
[2520,"chr5",37241695,37242713,"+",0,"NA","exon (NM_001136058, exon 1 of 14)","exon (NM_001136058, exon 1 of 14)",146,"NM_001136058",12933,"Mm.290995","NM_007765","ENSMUSG00000029121","Crmp1","CRMP-1|DRP-1|Dpysl1|ULIP-3|Ulip3","collapsin response mediator protein 1","protein-coding"]
[166,"chr1",181150834,181151406,"+",0,"NA","intron (NM_030131, intron 1 of 4)","CpG",189,"NM_030131",98417,"Mm.38229","NM_030131","ENSMUSG00000062169","Cnih4","AI647760|AW050376|CNIH-4|D530030D03Rik|E430023H19Rik|HSPC163","cornichon homolog 4 (Drosophila)","protein-coding"]
[2225,"chr4",3574536,3575128,"+",0,"NA","promoter-TSS (NM_054089)","promoter-TSS (NM_054089)",-47,"NM_054089",116940,"Mm.171323","NM_054089","ENSMUSG00000028233","Tgs1","D4Ertd800e|Ncoa6ip|Pimt","trimethylguanosine synthase homolog (S. cerevisiae)","protein-coding"]
[88,"chr1",92869717,92870354,"+",0,"NA","TTS (NM_172850)","TTS (NM_172850)",19657,"NR_029559",387167,null,"NR_029559","ENSMUSG00000065470","Mir149","Mirn149|mir-149|mmu-mir-149","microRNA 149","ncRNA"]
[1578,"chr18",53463691,53465526,"+",0,"NA","promoter-TSS (NM_001033281)","promoter-TSS (NM_001033281)",62,"NM_001033281",225518,"Mm.297645","NM_001033281","ENSMUSG00000069378","Prdm6","Gm92|PRISM","PR domain containing 6","protein-coding"]
[1009,"chr14",34820044,34820934,"+",0,"NA","intron (NM_008166, intron 1 of 15)","CpG-4398",353,"NM_008166",14803,"Mm.121569","NM_008166","ENSMUSG00000041078","Grid1","GluD1|GluRdelta1","glutamate receptor, ionotropic, delta 1","protein-coding"]
[30,"chr1",53296732,53297338,"+",0,"NA","promoter-TSS (NM_153556)","promoter-TSS (NM_153556)",-7,"NM_153556",227099,"Mm.60499","NM_153556","ENSMUSG00000026098","Pms1","-","postmeiotic segregation increased 1 (S. cerevisiae)","protein-coding"]
[403,"chr11",31965604,31966198,"+",0,"NA","exon (NM_026262, exon 1 of 5)","exon (NM_026262, exon 1 of 5)",268,"NM_026262",67592,"Mm.78654","NM_026262","ENSMUSG00000020299","4930524B15Rik","-","RIKEN cDNA 4930524B15 gene","protein-coding"]
[466,"chr11",61683582,61684775,"+",0,"NA","promoter-TSS (NM_178618)","promoter-TSS (NM_178618)",-232,"NM_178618",69640,"Mm.458559","NM_178618","ENSMUSG00000042377","Fam83g","2310040C09Rik|AI506990|wly","family with sequence similarity 83, member G","protein-coding"]
[134,"chr1",152399834,152400556,"+",0,"NA","exon (NM_177756, exon 1 of 12)","exon (NM_177756, exon 1 of 12)",328,"NM_177756",269132,"Mm.23782","NM_177756","ENSMUSG00000032649","Colgalt2","AI427652|D730024P12|Glt25d2","collagen beta(1-O)galactosyltransferase 2","protein-coding"]
[3438,"chr9",98986280,98986983,"+",0,"NA","intron (NM_011810, intron 1 of 4)","CpG",258,"NM_011810",23873,"Mm.74605","NM_011810","ENSMUSG00000032463","Faim","-","Fas apoptotic inhibitory molecule","protein-coding"]
[3038,"chr7",126695927,126696517,"+",0,"NA","promoter-TSS (NM_029420)","promoter-TSS (NM_029420)",222,"NM_175103",66162,"Mm.358692","NM_175103",null,"Bola2","1110025L05Rik|BolA-2","bolA-like 2 (E. coli)","protein-coding"]
[2151,"chr3",90231446,90232297,"+",0,"NA","5' UTR (NM_206924, exon 1 of 5)","5' UTR (NM_206924, exon 1 of 5)",274,"NM_206924",23922,"Mm.13912","NM_206924","ENSMUSG00000027937","Jtb","Gm622","jumping translocation breakpoint","protein-coding"]
[618,"chr11",101245897,101246955,"+",0,"NA","promoter-TSS (NM_019444)","promoter-TSS (NM_019444)",92,"NM_019444",54409,"Mm.260698","NM_019444",null,"Ramp2","-","receptor (calcitonin) activity modifying protein 2","protein-coding"]
[3290,"chr8",122465664,122466487,"+",0,"NA","TTS (NM_001033142)","TTS (NM_001033142)",-5383,"NM_013914",30927,"Mm.103673","NM_013914","ENSMUSG00000006587","Snai3","AI643946|Smuc|Zfp293","snail family zinc finger 3","protein-coding"]
[848,"chr12",113151659,113152339,"+",0,"NA","promoter-TSS (NM_007763)","promoter-TSS (NM_007763)",-13,"NM_007763",12925,"Mm.272368","NM_007763","ENSMUSG00000006360","Crip1","CRHP|CRP1|Crip","cysteine-rich protein 1 (intestinal)","protein-coding"]
[1829,"chr2",29889446,29891097,"+",0,"NA","intron (NM_013615, intron 1 of 16)","CpG",208,"NM_013615",18286,"Mm.330116","NM_013615","ENSMUSG00000026790","Odf2","AI848335|MMTEST29","outer dense fiber of sperm tails 2","protein-coding"]
[1904,"chr2",74762661,74763759,"+",0,"NA","promoter-TSS (NR_110445)","promoter-TSS (NR_110445)",230,"NM_010467",15429,"Mm.4932","NM_010467","ENSMUSG00000042448","Hoxd1","Hox-4.9","homeobox D1","protein-coding"]
[1629,"chr19",4148487,4149565,"+",0,"NA","intron (NM_011778, intron 1 of 10)","intron (NM_011778, intron 1 of 10)",363,"NM_011778",23789,"Mm.276859","NM_011778","ENSMUSG00000024835","Coro1b","-","coronin, actin binding protein 1B","protein-coding"]
[1761,"chr19",55315480,55316130,"+",0,"NA","promoter-TSS (NM_016862)","promoter-TSS (NM_016862)",227,"NM_025883",66980,"Mm.386789","NM_025883","ENSMUSG00000024982","Zdhhc6","2400007G07Rik|5930409M18Rik|AI462345|C77369","zinc finger, DHHC domain containing 6","protein-coding"]
[2755,"chr6",50110160,50111025,"+",0,"NA","intron (NM_001164734, intron 1 of 13)","GC_rich|Low_complexity|Low_complexity",351,"NM_001164733",56524,"Mm.41288","NM_008016","ENSMUSG00000038388","Mpp6","P55t|Pals2","membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)","protein-coding"]
[2196,"chr3",131564405,131565262,"+",0,"NA","promoter-TSS (NM_011863)","promoter-TSS (NM_011863)",65,"NM_011863",23971,"Mm.244912","NM_011863","ENSMUSG00000028032","Papss1","AI325286|Asapk|SK1","3'-phosphoadenosine 5'-phosphosulfate synthase 1","protein-coding"]
[1918,"chr2",90940114,90941329,"+",0,"NA","intron (NM_198683, intron 1 of 13)","CpG",324,"NM_017368",13046,"Mm.29495","NM_017368","ENSMUSG00000005506","Celf1","1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp1|D2Wsu101e|HNAB50|NAB50","CUGBP, Elav-like family member 1","protein-coding"]
[1323,"chr16",52031361,52032127,"+",0,"NA","intron (NM_001033238, intron 1 of 17)","CpG",195,"NM_001033238",208650,"Mm.328206","NM_001033238","ENSMUSG00000022637","Cblb","AI429560|AI851073|Cbl-b","Casitas B-lineage lymphoma b","protein-coding"]
[3237,"chr8",105860123,105861372,"+",0,"NA","promoter-TSS (NR_033574)","promoter-TSS (NR_033574)",87,"NR_033574",100043462,"Mm.269188","NR_033574","ENSMUSG00000071497","Nutf2-ps1","ENSMUSG00000071497|Gm10333|Ntf2|Nutf2","nuclear transport factor 2, pseudogene 1","pseudo"]
[1455,"chr17",35241306,35242443,"+",0,"NA","promoter-TSS (NM_001252457)","promoter-TSS (NM_001252457)",128,"NM_019693",53817,"Mm.439827","NM_019693","ENSMUSG00000019432","Ddx39b","0610030D10Rik|AI428441|Bat-1|Bat1|Bat1a|D17H6S81E|D17H6S81E-1|D6S81Eh","DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B","protein-coding"]
[3150,"chr8",60632296,60633397,"+",0,"NA","promoter-TSS (NM_027756)","promoter-TSS (NM_027756)",21,"NM_001293769",71306,"Mm.23242","NM_027756","ENSMUSG00000031647","Mfap3l","4933428A15Rik|5430405D20Rik|AI461995|AW125052|NYD-sp9|mKIAA0626","microfibrillar-associated protein 3-like","protein-coding"]
[2662,"chr5",135023402,135024102,"+",0,"NA","intron (NM_016801, intron 1 of 9)","CpG",180,"NM_016801",20907,"Mm.6225","NM_016801","ENSMUSG00000007207","Stx1a","HPC-1","syntaxin 1A (brain)","protein-coding"]
[1492,"chr17",56613263,56613958,"+",0,"NA","TTS (NM_028782)","TTS (NM_028782)",215,"NM_018730",54217,"Mm.11376","NM_018730","ENSMUSG00000057863","Rpl36","-","ribosomal protein L36","protein-coding"]
[3164,"chr8",70315571,70316170,"+",0,"NA","promoter-TSS (NM_001163282)","promoter-TSS (NM_001163282)",95,"NM_001163282",14559,"Mm.258280","NM_008107","ENSMUSG00000055694","Gdf1","AI385651|Gdf-1","growth differentiation factor 1","protein-coding"]
[2729,"chr6",8209164,8209740,"+",0,"NA","intron (NM_145374, intron 1 of 11)","CpG",225,"NM_145374",252875,"Mm.257151","NM_145374","ENSMUSG00000042447","Mios","C81488","missing oocyte, meiosis regulator, homolog (Drosophila)","protein-coding"]
[703,"chr11",120672690,120674031,"+",0,"NA","intron (NM_026877, intron 1 of 15)","CpG",387,"NM_026877",68938,"Mm.294020","NM_026877","ENSMUSG00000025142","Aspscr1","1190006K01Rik|ASPC|ASPCR1|ASPL|ASPS|RCC17|TUG","alveolar soft part sarcoma chromosome region, candidate 1 (human)","protein-coding"]
[3454,"chr9",106885439,106887579,"+",0,"NA","TTS (NM_029103)","TTS (NM_029103)",491,"NM_175402",109095,"Mm.431589","NM_175402",null,"Rbm15b","1810017N16Rik","RNA binding motif protein 15B","protein-coding"]
[1134,"chr15",76294403,76295537,"+",0,"NA","exon (NM_001195537, exon 1 of 7)","exon (NM_001195537, exon 1 of 7)",536,"NM_001195537",100503915,"Mm.393455","NM_001195537","ENSMUSG00000071724","Smpd5","ENSMUSG00000071724|Gm10345|MA-nSMase","sphingomyelin phosphodiesterase 5","protein-coding"]
[3304,"chr8",124231170,124232585,"+",0,"NA","intron (NM_139272, intron 1 of 15)","CpG",483,"NM_139272",108148,"Mm.33808","NM_139272","ENSMUSG00000089704","Galnt2","AI480629","UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2","protein-coding"]
[1100,"chr15",36179186,36179830,"+",0,"NA","promoter-TSS (NM_012031)","promoter-TSS (NM_012031)",-22,"NM_012031",26942,"Mm.295539","NM_012031","ENSMUSG00000037617","Spag1","tpis","sperm associated antigen 1","protein-coding"]
[2885,"chr7",24348966,24349615,"+",0,"NA","promoter-TSS (NM_029806)","promoter-TSS (NM_029806)",66,"NM_029806",76942,"Mm.261468","NM_029806","ENSMUSG00000030484","Lypd5","2210003I03Rik","Ly6/Plaur domain containing 5","protein-coding"]
[2861,"chr6",147042607,147043309,"+",0,"NA","intron (NM_145573, intron 1 of 7)","CpG",188,"NM_145573",232536,"Mm.46656","NM_145573",null,"Mrps35","MDSO23|MRP-S28|MRPS28","mitochondrial ribosomal protein S35","protein-coding"]
[1377,"chr17",24549595,24550815,"+",0,"NA","5' UTR (NM_013630, exon 1 of 46)","5' UTR (NM_013630, exon 1 of 46)",255,"NM_013630",18763,"Mm.30435","NM_013630","ENSMUSG00000032855","Pkd1","PC1|mFLJ00285","polycystic kidney disease 1 homolog","protein-coding"]
[3106,"chr8",9977559,9978218,"+",0,"NA","5' UTR (NM_026868, exon 1 of 3)","5' UTR (NM_026868, exon 1 of 3)",171,"NM_026868",68904,"Mm.142570","NM_026868","ENSMUSG00000040396","Abhd13","1110065L07Rik|AI463703|AI788994","abhydrolase domain containing 13","protein-coding"]
[2488,"chr5",30154655,30155835,"+",0,"NA","promoter-TSS (NM_178878)","promoter-TSS (NM_178878)",-8,"NM_145558",231086,"Mm.291463","NM_145558","ENSMUSG00000059447","Hadhb","4930479F15Rik|Mtpb|TP-beta","hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit","protein-coding"]
[1461,"chr17",35979040,35979979,"+",0,"NA","promoter-TSS (NM_008136)","promoter-TSS (NM_008136)",-42,"NM_001165892",75210,"Mm.40036","NM_145487","ENSMUSG00000038500","Prr3","4930540G07Rik|Cat56","proline-rich polypeptide 3","protein-coding"]
[185,"chr10",7589689,7590717,"+",0,"NA","exon (NM_172784, exon 1 of 7)","exon (NM_172784, exon 1 of 7)",403,"NM_172784",237253,"Mm.206759","NM_172784","ENSMUSG00000019796","Lrp11","1700034J19Rik|6330533B21|9830160H19Rik","low density lipoprotein receptor-related protein 11","protein-coding"]
[2487,"chr5",30104839,30105728,"+",0,"NA","promoter-TSS (NM_001167879)","promoter-TSS (NM_001167879)",87,"NM_001167879",242915,"Mm.332287","NM_001167879","ENSMUSG00000044576","Gareml","Fam59b|Gm444","GRB2 associated, regulator of MAPK1-like","protein-coding"]
[3188,"chr8",83652246,83653052,"+",0,"NA","promoter-TSS (NM_018771)","promoter-TSS (NM_018771)",-29,"NM_018771",67903,"Mm.20945","NM_018771","ENSMUSG00000019433","Gipc1","GIPC|Glut1CIP|Rgs19ip1|Semcap1|TIP-2|TaxIP2","GIPC PDZ domain containing family, member 1","protein-coding"]
[1719,"chr19",34192156,34192849,"+",0,"NA","5' UTR (NM_029682, exon 1 of 11)","5' UTR (NM_029682, exon 1 of 11)",232,"NM_029682",76630,"Mm.130952","NM_029682","ENSMUSG00000024776","Stambpl1","1700095N21Rik|8230401J17Rik|ALMalpha|AMSH-FP","STAM binding protein like 1","protein-coding"]
[2716,"chr5",147188693,147189554,"+",0,"NA","exon (NM_008178, exon 1 of 2)","exon (NM_008178, exon 1 of 2)",427,"NM_008178",14842,"Mm.4797","NM_008178","ENSMUSG00000053129","Gsx1","Gsh-1|Gsh1","GS homeobox 1","protein-coding"]
[4,"chr1",7088395,7089293,"+",0,"NA","promoter-TSS (NM_183028)","promoter-TSS (NM_183028)",-76,"NM_183028",319263,"Mm.21539","NM_183028","ENSMUSG00000051285","Pcmtd1","8430411F12Rik|A030012M09Rik","protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1","protein-coding"]
[1985,"chr2",139677676,139678965,"+",0,"NA","5' UTR (NM_001276489, exon 1 of 6)","5' UTR (NM_001276489, exon 1 of 6)",142,"NM_001276489",319909,"Mm.41113","NM_001126490","ENSMUSG00000074766","Ism1","5430433G21Rik|Ism","isthmin 1 homolog (zebrafish)","protein-coding"]
[2669,"chr5",136116363,136117027,"+",0,"NA","promoter-TSS (NM_011293)","promoter-TSS (NM_011293)",4,"NM_011293",20022,"Mm.4896","NM_011293","ENSMUSG00000039771","Polr2j","14.5kDa|Polr2i|Rpb11a|Rpo2-4","polymerase (RNA) II (DNA directed) polypeptide J","protein-coding"]
[1691,"chr19",10605242,10605839,"+",0,"NA","promoter-TSS (NM_015735)","promoter-TSS (NM_015735)",-85,"NM_015735",13194,"Mm.289915","NM_015735","ENSMUSG00000024740","Ddb1","127kDa|AA408517|p127-Ddb1","damage specific DNA binding protein 1","protein-coding"]
[2003,"chr2",154791067,154792300,"+",0,"NA","intron (NM_001139511, intron 1 of 7)","CpG",573,"NM_001139511",19383,"Mm.221440","NM_023130","ENSMUSG00000027593","Raly","AI663842|Merc","hnRNP-associated with lethal yellow","protein-coding"]

{"sheet":"3_enhancers not bound","index":2,"n_rows":2735,"n_cols":19,"rows_kept":2735,"read":"bin_record_odd","flags":["formulas_cached_only"]}
["PeakID (cmd=annotatePeaks.pl K27ac_WT_back_enhancers_NOT_bound_Dnmt3a.bed mm10)","Chr","Start","End","Strand","Peak Score","Focus Ratio/Region Size","Annotation","Detailed Annotation","Distance to TSS","Nearest PromoterID","Entrez ID","Nearest Unigene","Nearest Refseq","Nearest Ensembl","Gene Name","Gene Alias","Gene Description","Gene Type"]
[127,"chr1",135760077,135760273,"+",0,"NA","Intergenic","Intergenic",-5910,"NM_013750",27280,"Mm.34346","NM_013750","ENSMUSG00000041801","Phlda3","Tih1","pleckstrin homology-like domain, family A, member 3","protein-coding"]
[1801,"chr3",135732755,135733124,"+",0,"NA","Intergenic","ORR1B2|LTR|ERVL-MaLR",-41392,"NM_008689",18033,"Mm.256765","NM_008689","ENSMUSG00000028163","Nfkb1","NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105","nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105","protein-coding"]
[71,"chr1",86456694,86456999,"+",0,"NA","Intergenic","ID_B1|SINE|B4",30517,"NM_027966",71863,"Mm.179627","NM_027966","ENSMUSG00000036574","1700019O17Rik","-","RIKEN cDNA 1700019O17 gene","protein-coding"]
[1648,"chr2",167816391,167816775,"+",0,"NA","Intergenic","(CA)n|Simple_repeat|Simple_repeat",-115744,"NM_011201",19246,"Mm.277916","NM_011201","ENSMUSG00000027540","Ptpn1","PTP-1B|PTP-HA2|PTP1B","protein tyrosine phosphatase, non-receptor type 1","protein-coding"]
[1481,"chr2",30441598,30442832,"+",0,"NA","intron (NM_138748, intron 8 of 9)","intron (NM_138748, intron 8 of 9)",26165,"NM_138748",110854,"Mm.275393","NM_138748","ENSMUSG00000039515","Ppp2r4","2610042B21Rik|C77440|N28142|PR53","protein phosphatase 2A activator, regulatory subunit B","protein-coding"]
[2266,"chr7",24629546,24632003,"+",0,"NA","Intergenic","Intergenic",-5796,"NM_133743",72434,"Mm.281093","NM_133743","ENSMUSG00000057454","Lypd3","2310061G07Rik|C4.4a","Ly6/Plaur domain containing 3","protein-coding"]
[1178,"chr17",24839568,24841041,"+",0,"NA","TTS (NM_029197)","TTS (NM_029197)",9998,"NM_023480",68636,"Mm.347964","NM_023480","ENSMUSG00000045316","Fahd1","1110025H10Rik|AV002085","fumarylacetoacetate hydrolase domain containing 1","protein-coding"]
[1387,"chr19",24076300,24076434,"+",0,"NA","Intergenic","Intergenic",-45348,"NM_001114174",381217,"Mm.426078","NM_001114174","ENSMUSG00000071604","Fam189a2","AI414343|AI666772|Gm967","family with sequence similarity 189, member A2","protein-coding"]
[512,"chr11",113102707,113103092,"+",0,"NA","intron (NR_015556, intron 1 of 2)","intron (NR_015556, intron 1 of 2)",98939,"NR_015556",72386,"Mm.266961","NR_015556","ENSMUSG00000087259","2610035D17Rik","-","RIKEN cDNA 2610035D17 gene","ncRNA"]
[1932,"chr4",132456378,132456504,"+",0,"NA","Intergenic","CT-rich|Low_complexity|Low_complexity",7480,"NM_026039",67219,"Mm.45929","NM_026039","ENSMUSG00000066042","Med18","2810046C01Rik","mediator complex subunit 18","protein-coding"]
[463,"chr11",97310825,97311739,"+",0,"NA","Intergenic","Intergenic",-4434,"NM_025927",67036,"Mm.5381","NM_025927","ENSMUSG00000018882","Mrpl45","2600005P05Rik|AU043542|R75241","mitochondrial ribosomal protein L45","protein-coding"]
[517,"chr11",115970580,115970997,"+",0,"NA","Intergenic","B4|SINE|B4",-3937,"NM_001005608",192897,"Mm.213873","NM_133663","ENSMUSG00000020758","Itgb4","AA407042|C230078O20|CD104","integrin beta 4","protein-coding"]
[458,"chr11",96979426,96980570,"+",0,"NA","Intergenic","Intergenic",-2310,"NM_001080964",78912,"Mm.491183","NM_030220","ENSMUSG00000018678","Sp2","4930480I16Rik|mKIAA0048","Sp2 transcription factor","protein-coding"]
[2634,"chr9",71571420,71571917,"+",0,"NA","intron (NM_001033208, intron 2 of 12)","intron (NM_001033208, intron 2 of 12)",20692,"NM_001033208",102371,"Mm.27585","NM_001033208","ENSMUSG00000041361","Myzap","AA407270|AV006038|Gcom1|Gm640|Grinl1a7|Myozap","myocardial zonula adherens protein","protein-coding"]
[1785,"chr3",117937964,117938127,"+",0,"NA","Intergenic","Intergenic",-69109,"NM_029655",76561,"Mm.33824","NM_029655","ENSMUSG00000028007","Snx7","2510028H01Rik","sorting nexin 7","protein-coding"]
[1250,"chr17",83892362,83893073,"+",0,"NA","Intergenic","URR1A|DNA|hAT-Charlie",-45927,"NM_025325",107766,"Mm.30100","NM_025325","ENSMUSG00000000673","Haao","0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO","3-hydroxyanthranilate 3,4-dioxygenase","protein-coding"]
[1363,"chr19",7309484,7309936,"+",0,"NA","intron (NM_001080388, intron 1 of 16)","intron (NM_001080388, intron 1 of 16)",-14263,"NM_001080390",13728,"Mm.258986","NM_007928","ENSMUSG00000024969","Mark2","EMK-1|Emk|Par-1|Par-1b","MAP/microtubule affinity regulating kinase 2","protein-coding"]
[722,"chr13",40320499,40321762,"+",0,"NA","Intergenic","Intergenic",-33119,"NM_172143",218165,"Mm.364096","NM_172143","ENSMUSG00000047094","Ofcc1","opo","orofacial cleft 1 candidate 1","protein-coding"]
[2507,"chr8",115770590,115771662,"+",0,"NA","Intergenic","Intergenic",-64232,"NM_001025577",17132,"Mm.275549","NM_001025577",null,"Maf","2810401A20Rik|A230108G15Rik|AW047063|c-maf","avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog","protein-coding"]
[1109,"chr16",55531581,55531825,"+",0,"NA","Intergenic","Intergenic",36972,"NR_039578",100628589,null,"NR_039578","ENSMUSG00000093292","Mir5118","mmu-mir-5118|mu-mir-5118","microRNA 5118","ncRNA"]
[2067,"chr5",116433502,116433882,"+",0,"NA","Intergenic","Intergenic",-5030,"NR_015595",76798,"Mm.444322","NR_015595","ENSMUSG00000086219","Srrm4os","2410137F16Rik","serine/arginine repetitive matrix 4, opposite strand","ncRNA"]
[1630,"chr2",156726838,156726998,"+",0,"NA","intron (NM_001042487, intron 1 of 6)","intron (NM_001042487, intron 1 of 6)",5639,"NM_001042487",228836,"Mm.22094","NM_146128","ENSMUSG00000061689","Dlgap4","AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16","discs, large homolog-associated protein 4 (Drosophila)","protein-coding"]
[1597,"chr2",137098775,137099834,"+",0,"NA","intron (NM_013822, intron 5 of 25)","intron (NM_013822, intron 5 of 25)",17216,"NM_013822",16449,"Mm.22398","NM_013822","ENSMUSG00000027276","Jag1","ABE2|Gsfabe2|Htu|Ozz|Ser-1","jagged 1","protein-coding"]
[728,"chr13",45374807,45375170,"+",0,"NA","Intergenic","Intergenic",-14754,"NM_153789",218203,"Mm.212855","NM_153789","ENSMUSG00000038175","Mylip","9430057C20Rik|Mir","myosin regulatory light chain interacting protein","protein-coding"]
[1244,"chr17",79948698,79950806,"+",0,"NA","Intergenic","Intergenic",-53629,"NM_001286647",56298,"Mm.175403","NM_019717","ENSMUSG00000059811","Atl2","2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2","atlastin GTPase 2","protein-coding"]
[2154,"chr6",53709563,53709709,"+",0,"NA","Intergenic","Intergenic",111189,"NM_025817",66873,"Mm.422727","NM_025817","ENSMUSG00000043496","Tril","1200009O22Rik|AI316813|mKIAA0644","TLR4 interactor with leucine-rich repeats","protein-coding"]
[1638,"chr2",163412842,163413020,"+",0,"NA","intron (NM_025699, intron 2 of 3)","PB1D10|SINE|Alu",6539,"NM_025699",66680,"Mm.25119","NM_025699","ENSMUSG00000035399","Oser1","3230401D17Rik|AI256769|Perit1","oxidative stress responsive serine rich 1","protein-coding"]
[742,"chr13",52891726,52892601,"+",0,"NA","intron (NM_016709, intron 4 of 9)","intron (NM_016709, intron 4 of 9)",37514,"NM_016709",11992,"Mm.252034","NM_016709","ENSMUSG00000021460","Auh","C77140|W91705","AU RNA binding protein/enoyl-coenzyme A hydratase","protein-coding"]
[29,"chr1",51529784,51530735,"+",0,"NA","Intergenic","Intergenic",-51860,"NM_001310549",109019,"Mm.196290","NM_028696","ENSMUSG00000026107","Nabp1","4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2","nucleic acid binding protein 1","protein-coding"]
[350,"chr11",16809101,16809960,"+",0,"NA","intron (NM_207655, intron 1 of 27)","intron (NM_207655, intron 1 of 27)",57327,"NM_007912",13649,"Mm.8534","NM_007912","ENSMUSG00000020122","Egfr","9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2","epidermal growth factor receptor","protein-coding"]
[1969,"chr4",149063398,149063685,"+",0,"NA","intron (NM_019781, intron 2 of 8)","intron (NM_019781, intron 2 of 8)",36271,"NM_019781",56273,"Mm.184172","NM_019781","ENSMUSG00000028975","Pex14","Pex14p|R75137","peroxisomal biogenesis factor 14","protein-coding"]
[1810,"chr3",148422178,148422653,"+",0,"NA","Intergenic","Intergenic",532220,"NM_001081298",99633,"Mm.9776","NM_001081298","ENSMUSG00000028184","Adgrl2","AI450192|CIRL-2|Gm619|Lec1|Lphh1|Lphn2|mKIAA0786","adhesion G protein-coupled receptor L2","protein-coding"]
[2203,"chr6",114930669,114931200,"+",0,"NA","Intergenic","Intergenic",-9182,"NM_177683",232334,"Mm.268357","NM_177683",null,"Vgll4","BC048841|VGL-4","vestigial like 4 (Drosophila)","protein-coding"]
[58,"chr1",76664647,76665053,"+",0,"NA","Intergenic","Intergenic",155290,"NR_105761",102465175,null,"NR_105761","ENSMUSG00000098611","Mir6343","Gm27304|mmu-mir-6343","microRNA 6343","ncRNA"]
[153,"chr1",153175486,153175889,"+",0,"NA","intron (NM_008485, intron 2 of 23)","PB1D10|SINE|Alu",10760,"NM_008485",16782,"Mm.329272","NM_008485","ENSMUSG00000026479","Lamc2","AA589349","laminin, gamma 2","protein-coding"]
[2387,"chr7",130981640,130981880,"+",0,"NA","exon (NM_019564, exon 6 of 9)","exon (NM_019564, exon 6 of 9)",45557,"NM_019564",56213,"Mm.30156","NM_019564","ENSMUSG00000006205","Htra1","AI429470|HTRA|L56|Prss11|RSPP11","HtrA serine peptidase 1","protein-coding"]
[1546,"chr2",79603893,79605930,"+",0,"NA","Intergenic","Intergenic",-30514,"NM_080558",70599,"Mm.272881","NM_080558","ENSMUSG00000027007","Ssfa2","5730488C15Rik|CS-1|CS1|KRAP|SPAG13|mKIAA1927","sperm specific antigen 2","protein-coding"]
[101,"chr1",125483343,125484134,"+",0,"NA","Intergenic","Intergenic",-48011,"NM_001205386",74117,"Mm.183102","NM_023735","ENSMUSG00000026341","Actr3","1200003A09Rik|Arp3","ARP3 actin-related protein 3","protein-coding"]
[340,"chr10",128095177,128095485,"+",0,"NA","intron (NM_054078, intron 1 of 29)","B1F2|SINE|Alu",2548,"NM_054078",116848,"Mm.252213","NM_054078","ENSMUSG00000040054","Baz2a","AA415431|C030005G16Rik|C78388|Tip5|Walp3|mKIAA0314","bromodomain adjacent to zinc finger domain, 2A","protein-coding"]
[311,"chr10",96621933,96622194,"+",0,"NA","3' UTR (NM_007569, exon 2 of 2)","3' UTR (NM_007569, exon 2 of 2)",5062,"NM_007569",12226,"Mm.23811","NM_007569","ENSMUSG00000036478","Btg1","AI426953|AW546738","B cell translocation gene 1, anti-proliferative","protein-coding"]
[825,"chr14",20842047,20842274,"+",0,"NA","intron (NM_008873, intron 10 of 10)","intron (NM_008873, intron 10 of 10)",5498,"NM_008873",18792,"Mm.4183","NM_008873","ENSMUSG00000021822","Plau","u-PA|uPA","plasminogen activator, urokinase","protein-coding"]
[917,"chr15",6871278,6872519,"+",0,"NA","intron (NM_001310469, intron 1 of 17)","intron (NM_001310469, intron 1 of 17)",2415,"NM_011019",18414,"Mm.10760","NM_011019","ENSMUSG00000022146","Osmr","OSMRB","oncostatin M receptor","protein-coding"]
[2425,"chr8",25635707,25636575,"+",0,"NA","intron (NM_001308482, intron 1 of 7)","intron (NM_001308482, intron 1 of 7)",-4436,"NM_001081269",234135,"Mm.217337","NM_001001735","ENSMUSG00000054823","Whsc1l1","6720429E03|A530023P05|AI528490|NSD3|WHISTLE","Wolf-Hirschhorn syndrome candidate 1-like 1 (human)","protein-coding"]
[495,"chr11",101687258,101687907,"+",0,"NA","Intergenic","Intergenic",22041,"NM_025404",80981,"Mm.266840","NM_025404","ENSMUSG00000034936","Arl4d","1110036H21Rik|ARL6|AW456149|Arf4l|Arfl4|Arl5","ADP-ribosylation factor-like 4D","protein-coding"]
[1703,"chr3",66650957,66651104,"+",0,"NA","Intergenic","Intergenic",327781,"NM_001302358",20429,"Mm.39093","NM_013665","ENSMUSG00000027833","Shox2","6330543G17Rik|OG12|Og12x|Prx3|SHOT","short stature homeobox 2","protein-coding"]
[2086,"chr5",124036060,124036493,"+",0,"NA","Intergenic","Intergenic",-4016,"NM_177876",330192,"Mm.4079","NM_177876","ENSMUSG00000066278","Vps37b","2300007F24Rik|AI415429|BC026744","vacuolar protein sorting 37B (yeast)","protein-coding"]
[1322,"chr18",61623736,61626392,"+",0,"NA","Intergenic","Intergenic",-14589,"NR_045420",545261,"Mm.426593","NR_045420","ENSMUSG00000098098","Bvht","Braveheart|Gm20748","braveheart long non-coding RNA","ncRNA"]
[1816,"chr4",4015882,4016923,"+",0,"NA","exon (NM_181989, exon 2 of 7)","exon (NM_181989, exon 2 of 7)",3261,"NM_181989",242285,"Mm.98096","NM_181989","ENSMUSG00000028236","Sdr16c5","Rdhe2|Scdr9","short chain dehydrogenase/reductase family 16C, member 5","protein-coding"]
[2460,"chr8",80852865,80853773,"+",0,"NA","intron (NM_001301298, intron 1 of 10)","intron (NM_001301298, intron 1 of 10)",27160,"NM_021356",14388,"Mm.277409","NM_021356","ENSMUSG00000031714","Gab1","AA408973|AW107238","growth factor receptor bound protein 2-associated protein 1","protein-coding"]
[2510,"chr8",117121548,117121931,"+",0,"NA","intron (NM_001163028, intron 7 of 11)","intron (NM_001163028, intron 7 of 11)",25874,"NM_001163028",63857,"Mm.174133","NM_021486","ENSMUSG00000031845","Bco1","Bcdo|Bcdo1|Bcmo1|CMO1|Cmoi|beta-CD|betaCMOOX","beta-carotene oxygenase 1","protein-coding"]
[1172,"chr17",17825719,17825946,"+",0,"NA","Intergenic","Intergenic",-4356,"NR_029536",387230,null,"NR_029536","ENSMUSG00000065396","Mir99b","Mirn99b|mmu-mir-99b","microRNA 99b","ncRNA"]
[2699,"chr9",110696871,110697748,"+",0,"NA","intron (NM_028312, intron 2 of 6)","intron (NM_028312, intron 2 of 6)",40806,"NM_028312",72654,"Mm.249115","NM_028312","ENSMUSG00000019659","Ccdc12","2700094L05Rik|C76605","coiled-coil domain containing 12","protein-coding"]
[2458,"chr8",79561806,79562798,"+",0,"NA","Intergenic","Intergenic",-77374,"NM_001256033",73945,"Mm.34348","NM_001081164","ENSMUSG00000036990","Otud4","4930431L18Rik|AI449692|D8Ertd69e|mKIAA1046","OTU domain containing 4","protein-coding"]
[1259,"chr17",87472531,87473614,"+",0,"NA","Intergenic","Intergenic",-26137,"NM_007589",12314,"Mm.329243","NM_007589","ENSMUSG00000036438","Calm2","1500001E21Rik|AL024017","calmodulin 2","protein-coding"]
[834,"chr14",30561822,30562155,"+",0,"NA","intron (NM_009388, intron 4 of 13)","intron (NM_009388, intron 4 of 13)",-10161,"NR_037237",100526475,null,"NR_037237","ENSMUSG00000093156","Mir3076","mir-3076|mmu-mir-3076","microRNA 3076","ncRNA"]
[285,"chr10",76874284,76874553,"+",0,"NA","intron (NM_021568, intron 2 of 15)","intron (NM_021568, intron 2 of 15)",87529,"NM_021568",59093,"Mm.272803","NM_021568","ENSMUSG00000001120","Pcbp3","AlphaCP-3","poly(rC) binding protein 3","protein-coding"]
[2441,"chr8",61340928,61342126,"+",0,"NA","intron (NM_021506, intron 4 of 11)","intron (NM_021506, intron 4 of 11)",-52655,"NR_045475",69279,"Mm.417857","NR_045475","ENSMUSG00000099419","1700001D01Rik","-","RIKEN cDNA 1700001D01 gene","ncRNA"]
[2414,"chr8",23030530,23030654,"+",0,"NA","intron (NM_001277280, intron 1 of 42)","intron (NM_001277280, intron 1 of 42)",-4507,"NM_001277281",11733,"Mm.334444","NM_031158","ENSMUSG00000031543","Ank1","Ank-1|nb|pale","ankyrin 1, erythroid","protein-coding"]
[1216,"chr17",42932105,42932355,"+",0,"NA","Intergenic","Intergenic",-55806,"NM_009847",12488,"Mm.218637","NM_009847","ENSMUSG00000061665","Cd2ap","AL024079|C78928|METS-1|Mets1","CD2-associated protein","protein-coding"]
[2285,"chr7",28972409,28972520,"+",0,"NA","intron (NM_001285943, intron 6 of 6)","intron (NM_001285943, intron 6 of 6)",9424,"NM_001285943",73830,"Mm.29714","NM_028659","ENSMUSG00000053565","Eif3k","1200009C21Rik|Eif3s12","eukaryotic translation initiation factor 3, subunit K","protein-coding"]
[2274,"chr7",27570250,27570894,"+",0,"NA","intron (NM_175107, intron 6 of 9)","intron (NM_175107, intron 6 of 9)",10096,"NM_001122767",66367,"Mm.29831","NM_175107","ENSMUSG00000049643","2310022A10Rik","-","RIKEN cDNA 2310022A10 gene","protein-coding"]
[2194,"chr6",108456475,108457259,"+",0,"NA","intron (NM_010585, intron 44 of 61)","intron (NM_010585, intron 44 of 61)",-32876,"NR_106121",102465766,null,"NR_106121","ENSMUSG00000105697","Mir7661","mmu-mir-7661","microRNA 7661","ncRNA"]
[1135,"chr16",87603128,87604684,"+",0,"NA","Intergenic","Intergenic",50576,"NM_144854",224419,"Mm.194466","NM_144854","ENSMUSG00000025610","Map3k7cl","C21orf7|ORF63|Tak1l","Map3k7 C-terminal like","protein-coding"]
[2002,"chr5",33384525,33385004,"+",0,"NA","intron (NM_001081101, intron 2 of 13)","intron (NM_001081101, intron 2 of 13)",6068,"NM_001081101",71101,"Mm.132178","NM_001081101","ENSMUSG00000037355","Uvssa","4933407H18Rik|D330017J19Rik|Kiaa1530|mKIAA1530","UV stimulated scaffold protein A","protein-coding"]
[1203,"chr17",33440282,33440394,"+",0,"NA","Intergenic","Intergenic",7439,"NM_183282",69481,"Mm.154333","NM_183282","ENSMUSG00000092519","Actl9","1700029I08Rik|AV259599","actin-like 9","protein-coding"]
[96,"chr1",120083228,120083812,"+",0,"NA","Intergenic","Intergenic",-9740,"NM_019432",170706,"Mm.24750","NM_019432",null,"Tmem37","AI173373|AW540203|Pr|Pr1","transmembrane protein 37","protein-coding"]
[2088,"chr5",124625024,124625969,"+",0,"NA","intron (NM_026486, intron 15 of 17)","intron (NM_026486, intron 15 of 17)",-3556,"NM_011596",21871,"Mm.1158","NM_011596","ENSMUSG00000038023","Atp6v0a2","8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2","ATPase, H+ transporting, lysosomal V0 subunit A2","protein-coding"]
[1068,"chr16",24949703,24949872,"+",0,"NA","intron (NM_001145952, intron 9 of 11)","intron (NM_001145952, intron 9 of 11)",-109852,"NR_040374",319487,"Mm.137341","NR_040374","ENSMUSG00000096960","A230028O05Rik","-","RIKEN cDNA A230028O05 gene","ncRNA"]
[1667,"chr2",180167049,180167527,"+",0,"NA","Intergenic","PB1D10|SINE|Alu",-4300,"NM_019822",56436,"Mm.316654","NM_019822","ENSMUSG00000039041","Adrm1","1110063P18Rik|2510006J17Rik|AA408205|ARM-1|AU043535|Arm1|Gp110|Rpn13","adhesion regulating molecule 1","protein-coding"]
[2114,"chr6",5300971,5301406,"+",0,"NA","Intergenic","Intergenic",-2815,"NM_183308",330260,"Mm.126984","NM_183308",null,"Pon2","6330405I24Rik|AI481612","paraoxonase 2","protein-coding"]
[486,"chr11",100386996,100389330,"+",0,"NA","intron (NM_010593, intron 1 of 13)","intron (NM_010593, intron 1 of 13)",9627,"NM_010593",16480,"Mm.299774","NM_010593","ENSMUSG00000001552","Jup","Ctnng|D930025P04Rik|PG","junction plakoglobin","protein-coding"]
[2134,"chr6",34866077,34866187,"+",0,"NA","intron (NM_197986, intron 1 of 1)","intron (NM_197986, intron 1 of 1)",2986,"NM_197986",68487,"Mm.248440","NM_197986","ENSMUSG00000057137","Tmem140","1110007F12Rik","transmembrane protein 140","protein-coding"]
[1354,"chr19",4428952,4429297,"+",0,"NA","intron (NM_007485, intron 3 of 4)","intron (NM_007485, intron 3 of 4)",-10199,"NR_045990",319314,"Mm.393810","NR_045989","ENSMUSG00000087132","A930001C03Rik","-","RIKEN cDNA A930001C03 gene","ncRNA"]
[569,"chr12",69361658,69362223,"+",0,"NA","Intergenic","Intergenic",-4764,"NM_025441",66244,"Mm.46705","NM_025441","ENSMUSG00000020982","Nemf","1500011I12Rik|4933405E14Rik|Sdccag1","nuclear export mediator factor","protein-coding"]
[8,"chr1",24111179,24112057,"+",0,"NA","Intergenic","Intergenic",-11277,"NM_026604",68187,"Mm.87130","NM_026604","ENSMUSG00000026153","Fam135a","4921533L14Rik|AI256732|AI835491","family with sequence similarity 135, member A","protein-coding"]
[2359,"chr7",110288657,110289544,"+",0,"NA","Intergenic","Intergenic",67397,"NM_009302",20947,"Mm.334144","NM_009302","ENSMUSG00000031015","Swap70","70kDa|AV235546","SWA-70 protein","protein-coding"]
[2045,"chr5",92471400,92471996,"+",0,"NA","intron (NM_007644, intron 2 of 11)","intron (NM_007644, intron 2 of 11)",13141,"NR_105843",102466159,null,"NR_105843","ENSMUSG00000099160","Mir6415","Gm27714|mmu-mir-6415","microRNA 6415","ncRNA"]
[1396,"chr19",32190398,32191270,"+",0,"NA","intron (NM_001168525, intron 5 of 9)","intron (NM_001168525, intron 5 of 9)",20179,"NM_001168526",208449,"Mm.329810","NM_144792","ENSMUSG00000040451","Sgms1","9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23","sphingomyelin synthase 1","protein-coding"]
[686,"chr13",21408282,21408499,"+",0,"NA","Intergenic","Intergenic",-5635,"NM_023685",72739,"Mm.296071","NM_023685","ENSMUSG00000021327","Zkscan3","2810435N07Rik|AA408594|AI132359|Skz1|Zf47|Zfp-47|Zfp306|Zfp307|mszf35","zinc finger with KRAB and SCAN domains 3","protein-coding"]
[1760,"chr3",101600611,101601187,"+",0,"NA","intron (NM_144900, intron 1 of 22)","intron (NM_144900, intron 1 of 22)",3808,"NM_144900",11928,"Mm.193670","NM_144900","ENSMUSG00000033161","Atp1a1","Atpa-1|BC010319","ATPase, Na+/K+ transporting, alpha 1 polypeptide","protein-coding"]
[2033,"chr5",64808871,64809011,"+",0,"NA","intron (NM_008453, intron 1 of 5)","intron (NM_008453, intron 1 of 5)",5418,"NM_008453",16599,"Mm.392759","NM_008453","ENSMUSG00000029178","Klf3","9930027G08Rik|AL024007|Bklf|Tef-2","Kruppel-like factor 3 (basic)","protein-coding"]
[391,"chr11",60336027,60336619,"+",0,"NA","intron (NM_153080, intron 1 of 14)","MER21C|LTR|ERVL",16582,"NM_153080",216810,"Mm.218875","NM_153080","ENSMUSG00000000538","Tom1l2","2900016I08Rik|A730055F12Rik|AU042072|Srebf1","target of myb1-like 2 (chicken)","protein-coding"]
[943,"chr15",38298543,38298787,"+",0,"NA","intron (NM_001289471, intron 1 of 4)","intron (NM_001289471, intron 1 of 4)",2046,"NM_013692",21847,"Mm.4292","NM_013692","ENSMUSG00000037465","Klf10","AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF","Kruppel-like factor 10","protein-coding"]
[2676,"chr9",99631034,99633324,"+",0,"NA","intron (NM_001311142, intron 1 of 15)","intron (NM_001311142, intron 1 of 15)",2601,"NM_001311142",72507,"Mm.221455","NM_028258","ENSMUSG00000037784","Dzip1l","2610524A10Rik|AI663976","DAZ interacting protein 1-like","protein-coding"]
[1887,"chr4",102582564,102582753,"+",0,"NA","intron (NM_019840, intron 6 of 14)","intron (NM_019840, intron 6 of 14)",-4900,"NM_001177982",18578,"Mm.20181","NM_019840","ENSMUSG00000028525","Pde4b","Dpde4|R74983|dunce","phosphodiesterase 4B, cAMP specific","protein-coding"]
[1375,"chr19",10724266,10724495,"+",0,"NA","intron (NM_007650, intron 5 of 10)","intron (NM_007650, intron 5 of 10)",14594,"NM_007650",12507,"Mm.779","NM_007650","ENSMUSG00000024669","Cd5","Ly-1|Ly-12|Ly-A|Lyt-1","CD5 antigen","protein-coding"]
[180,"chr1",179570207,179570327,"+",0,"NA","intron (NM_146105, intron 1 of 10)","intron (NM_146105, intron 1 of 10)",23738,"NM_146105",226744,"Mm.87662","NM_146105","ENSMUSG00000038949","Cnst","9630058J23Rik","consortin, connexin sorting protein","protein-coding"]
[1585,"chr2",129406907,129408206,"+",0,"NA","Intergenic","Intergenic",-36417,"NM_008361",16176,"Mm.222830","NM_008361","ENSMUSG00000027398","Il1b","IL-1beta|Il-1b","interleukin 1 beta","protein-coding"]
[1877,"chr4",89056926,89057110,"+",0,"NA","intron (NR_033533, intron 1 of 2)","intron (NR_033533, intron 1 of 2)",6711,"NR_033533",100040617,"Mm.171720","NR_033533","ENSMUSG00000085183","Gm12603","OTTMUSG00000007693","predicted gene 12603","ncRNA"]
[246,"chr10",40262475,40262775,"+",0,"NA","Intergenic","Intergenic",-4960,"NM_026113",67371,"Mm.64104","NM_026113","ENSMUSG00000019837","Gtf3c6","2410016F19Rik|AU019813","general transcription factor IIIC, polypeptide 6, alpha","protein-coding"]
[2705,"chr9",116153371,116153736,"+",0,"NA","intron (NM_029575, intron 1 of 6)","intron (NM_029575, intron 1 of 6)",21810,"NM_029575",21813,"Mm.172346","NM_009371","ENSMUSG00000032440","Tgfbr2","1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII","transforming growth factor, beta receptor II","protein-coding"]
[2227,"chr6",125572928,125573219,"+",0,"NA","intron (NM_011708, intron 6 of 51)","intron (NM_011708, intron 6 of 51)",20125,"NM_011708",22371,"Mm.22339","NM_011708","ENSMUSG00000001930","Vwf","6820430P06Rik|AI551257|B130011O06Rik|C630030D09|F8VWF|VWD","Von Willebrand factor homolog","protein-coding"]
[690,"chr13",30194410,30194609,"+",0,"NA","intron (NM_153546, intron 1 of 12)","intron (NM_153546, intron 1 of 12)",58019,"NM_153546",218121,"Mm.89682","NM_153546","ENSMUSG00000038732","Mboat1","9130215M02Rik|BC023845|LPEAT1|Moact1|Oact1","membrane bound O-acyltransferase domain containing 1","protein-coding"]
[1168,"chr17",13867962,13868116,"+",0,"NA","intron (NM_010806, intron 22 of 32)","intron (NM_010806, intron 22 of 32)",-80334,"NM_001122977",635895,"Mm.388844","NM_001122977","ENSMUSG00000067941","Gm7168","EG635895","predicted gene 7168","protein-coding"]
[61,"chr1",77461224,77462869,"+",0,"NA","intron (NM_007936, intron 3 of 17)","intron (NM_007936, intron 3 of 17)",34722,"NR_105770",102465180,null,"NR_105770","ENSMUSG00000099141","Mir6352","Gm27481|mmu-mir-6352","microRNA 6352","ncRNA"]
[536,"chr12",3322672,3324183,"+",0,"NA","Intergenic","Intergenic",-13458,"NM_016676",19325,"Mm.378993","NM_016676","ENSMUSG00000020671","Rab10","AW107754","RAB10, member RAS oncogene family","protein-coding"]
[1767,"chr3",103139104,103140157,"+",0,"NA","intron (NM_177857, intron 5 of 18)","intron (NM_177857, intron 5 of 18)",12074,"NM_177857",329727,"Mm.293641","NM_177857","ENSMUSG00000007379","Dennd2c","A930010I20Rik","DENN/MADD domain containing 2C","protein-coding"]
[1653,"chr2",168525263,168525861,"+",0,"NA","intron (NR_111897, intron 4 of 5)","intron (NR_111897, intron 4 of 5)",64803,"NM_001291178",18019,"Mm.116802","NM_010899","ENSMUSG00000027544","Nfatc2","AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp","nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2","protein-coding"]
[2237,"chr6",134688727,134688925,"+",0,"NA","intron (NM_026371, intron 3 of 3)","Lx8|LINE|L1",47886,"NM_026371",67774,"Mm.41892","NM_026371","ENSMUSG00000042992","Borcs5","5830457J20Rik|AW124643|Loh12cr1","BLOC-1 related complex subunit 5","protein-coding"]
[1688,"chr3",52159367,52159535,"+",0,"NA","Intergenic","Intergenic",-54445,"NM_001004176",433586,"Mm.234972","NM_001004176","ENSMUSG00000061143","Maml3","AV234550|BC049812|Mam-2|mKIAA1816","mastermind like 3 (Drosophila)","protein-coding"]
[2394,"chr7",140840451,140840730,"+",0,"NA","intron (NR_045717, intron 3 of 3)","Charlie10|DNA|hAT-Charlie",-4975,"NM_001099742",338417,"Mm.270960","NM_001099742","ENSMUSG00000038801","Scgb1c1","Ryd5","secretoglobin, family 1C, member 1","protein-coding"]
[1266,"chr17",88508565,88511145,"+",0,"NA","Intergenic","B2_Mm1t|SINE|B2",-20269,"NM_028658",73825,"Mm.271817","NM_028658","ENSMUSG00000034709","Ppp1r21","1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1","protein phosphatase 1, regulatory subunit 21","protein-coding"]
[2654,"chr9",79196857,79196984,"+",0,"NA","Intergenic","MTE2a|LTR|ERVL-MaLR",322382,"NR_045336",100038575,"Mm.367838","NR_045336",null,"Gm10635","ENSMUSG00000074174","predicted gene 10635","ncRNA"]
[1458,"chr2",20547690,20548462,"+",0,"NA","intron (NM_178059, intron 3 of 18)","intron (NM_178059, intron 3 of 18)",28563,"NM_001177631",208618,"Mm.237935","NM_029895","ENSMUSG00000036617","Etl4","6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt","enhancer trap locus 4","protein-coding"]
[444,"chr11",93940769,93940894,"+",0,"NA","intron (NM_134012, intron 15 of 15)","intron (NM_134012, intron 15 of 15)",14952,"NM_001077529",18103,"Mm.1260","NM_008705","ENSMUSG00000020857","Nme2","NM23-H2|NM23B|nm23-M2","NME/NM23 nucleoside diphosphate kinase 2","protein-coding"]
[508,"chr11",108752124,108754580,"+",0,"NA","intron (NM_145688, intron 2 of 6)","intron (NM_145688, intron 2 of 6)",70734,"NM_029586",76380,"Mm.344071","NM_029586","ENSMUSG00000020728","Cep112","1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351|Ccdc46|Macoco","centrosomal protein 112","protein-coding"]
[1336,"chr18",65704725,65706187,"+",0,"NA","intron (NM_177028, intron 1 of 14)","intron (NM_177028, intron 1 of 14)",7188,"NM_177028",319888,"Mm.183576","NM_177028","ENSMUSG00000046610","Oacyl","5330437I02Rik|Acyl3","O-acyltransferase like","protein-coding"]
[39,"chr1",60608425,60609379,"+",0,"NA","Intergenic","Intergenic",-42137,"NM_001045513",77300,"Mm.440325","NM_001045513","ENSMUSG00000026014","Raph1","9430025M21Rik|C730009O10Rik|Lpd","Ras association (RalGDS/AF-6) and pleckstrin homology domains 1","protein-coding"]
[1089,"chr16",28944952,28945538,"+",0,"NA","Intergenic","Intergenic",-15547,"NM_177718",239796,"Mm.155887","NM_177718","ENSMUSG00000051065","Mb21d2","1600021P15Rik|A430031N04|C87006","Mab-21 domain containing 2","protein-coding"]
[558,"chr12",39840056,39840370,"+",0,"NA","Intergenic","Intergenic",197163,"NM_007487",11861,"Mm.12723","NM_007487","ENSMUSG00000047446","Arl4a","AI467555|Arl4","ADP-ribosylation factor-like 4A","protein-coding"]
[12,"chr1",34701172,34701300,"+",0,"NA","Intergenic","Intergenic",-65026,"NR_033627",241051,"Mm.282827","NR_033627",null,"AA619741","-","PHD finger protein 19 pseudogene","pseudo"]
[1554,"chr2",85060397,85061659,"+",0,"NA","intron (NM_001081260, intron 5 of 11)","intron (NM_001081260, intron 5 of 11)",10568,"NM_001081260",228140,"Mm.23606","NM_001081260","ENSMUSG00000033955","Tnks1bp1","Tab182|mKIAA1741","tankyrase 1 binding protein 1","protein-coding"]
[2168,"chr6",70824283,70824837,"+",0,"NA","Intergenic","Intergenic",-19955,"NM_010121",13666,"Mm.247167","NM_010121","ENSMUSG00000031668","Eif2ak3","Pek|Perk","eukaryotic translation initiation factor 2 alpha kinase 3","protein-coding"]
[573,"chr12",69437545,69438340,"+",0,"NA","Intergenic","Intergenic",37608,"NR_038060",76062,"Mm.380755","NR_038060",null,"5830428M24Rik","100040862|Gm3007","RIKEN cDNA 5830428M24 gene","ncRNA"]
[2710,"chr9",118512514,118514197,"+",0,"NA","intron (NM_018748, intron 1 of 23)","intron (NM_018748, intron 1 of 23)",7037,"NM_018748",54214,"Mm.10409","NM_018748","ENSMUSG00000038708","Golga4","AI225887|AU019508|Olp-1","golgi autoantigen, golgin subfamily a, 4","protein-coding"]
[1084,"chr16",26429601,26431351,"+",0,"NA","Intergenic","Intergenic",-32659,"NM_053241",114141,"Mm.275205","NM_053241","ENSMUSG00000038148","Cldn16","PCLN1|claudin-16","claudin 16","protein-coding"]
[638,"chr12",86834175,86834663,"+",0,"NA","Intergenic","Intergenic",50395,"NM_145836",238330,"Mm.248358","NM_145836","ENSMUSG00000034168","Irf2bpl","6430527G18Rik|Eap1","interferon regulatory factor 2 binding protein-like","protein-coding"]
[2350,"chr7",102388953,102390499,"+",0,"NA","intron (NM_009287, intron 3 of 11)","MIR|SINE|MIR",-51969,"NM_009103",20133,"Mm.197486","NM_009103","ENSMUSG00000030978","Rrm1","RnrM1","ribonucleotide reductase M1","protein-coding"]
[875,"chr14",75892531,75893672,"+",0,"NA","Intergenic","Intergenic",45178,"NR_028481",100303751,"Mm.484707","NR_028481","ENSMUSG00000065147","Snora31","MBI-161","small nucleolar RNA, H/ACA box 31","snoRNA"]
[2479,"chr8",92363822,92364218,"+",0,"NA","Intergenic","Intergenic",6224,"NM_018826",54352,"Mm.101153","NM_018826","ENSMUSG00000031737","Irx5","-","Iroquois related homeobox 5 (Drosophila)","protein-coding"]
[1522,"chr2",59841859,59842511,"+",0,"NA","intron (NM_198294, intron 26 of 26)","intron (NM_198294, intron 26 of 26)",40421,"NM_001159636",72137,"Mm.288734","NM_028118","ENSMUSG00000026988","Wdsub1","1700048E19Rik|2610014F08Rik","WD repeat, SAM and U-box domain containing 1","protein-coding"]
[1,"chr1",6188920,6189087,"+",0,"NA","Intergenic","B4A|SINE|B4",-25659,"NM_009826",12421,"Mm.293811","NM_009826","ENSMUSG00000025907","Rb1cc1","2900055E04Rik|5930404L04Rik|Cc1|FIP200|LaXp180","RB1-inducible coiled-coil 1","protein-coding"]
[506,"chr11",106895516,106898104,"+",0,"NA","intron (NM_025481, intron 1 of 18)","intron (NM_025481, intron 1 of 18)",23905,"NM_025481",66313,"Mm.340955","NM_025481","ENSMUSG00000018363","Smurf2","2810411E22Rik|AI558114|AI649275","SMAD specific E3 ubiquitin protein ligase 2","protein-coding"]
[136,"chr1",135891304,135891679,"+",0,"NA","intron (NM_001313701, intron 2 of 13)","intron (NM_001313701, intron 2 of 13)",27716,"NM_001313701",18772,"Mm.4494","NM_019645","ENSMUSG00000026413","Pkp1","-","plakophilin 1","protein-coding"]
[116,"chr1",132319686,132319832,"+",0,"NA","intron (NM_001195025, intron 1 of 7)","intron (NM_001195025, intron 1 of 7)",3634,"NM_001195025",74137,"Mm.100666","NM_028778","ENSMUSG00000009772","Nuak2","1200013B22Rik|Omphk2|Snark|mKIAA0537","NUAK family, SNF1-like kinase, 2","protein-coding"]
[1197,"chr17",31753876,31754415,"+",0,"NA","Intergenic","Intergenic",76214,"NM_001278570",12954,"Mm.1228","NM_013501","ENSMUSG00000024041","Cryaa","Acry-1|Crya-1|Crya1|DAcry-1|lop18","crystallin, alpha A","protein-coding"]
[1580,"chr2",118658810,118659169,"+",0,"NA","Intergenic","Intergenic",-4588,"NM_001033254",214230,"Mm.241857","NM_001033254","ENSMUSG00000074923","Pak6","4732456M09","p21 protein (Cdc42/Rac)-activated kinase 6","protein-coding"]
[2419,"chr8",24298287,24298413,"+",0,"NA","Intergenic","Intergenic",140596,"NM_026931",69068,"Mm.25775","NM_026931",null,"1810011O10Rik","1110065B09Rik|AW121743|AW321058","RIKEN cDNA 1810011O10 gene","protein-coding"]
[2146,"chr6",47781424,47781606,"+",0,"NA","Intergenic","Intergenic",22137,"NR_030485",735289,null,"NR_030485","ENSMUSG00000076060","Mir704","Mirn704|mir-704|mmu-mir-704","microRNA 704","ncRNA"]
[661,"chr12",112117403,112118659,"+",0,"NA","intron (NM_001081169, intron 6 of 14)","intron (NM_001081169, intron 6 of 14)",-8722,"NR_049197",100885836,null,"NR_049197","ENSMUSG00000106228","Mir3073b","mir-3073b|mmu-mir-3073b","microRNA 3073b","ncRNA"]
[2482,"chr8",92898739,92899298,"+",0,"NA","intron (NM_173014, intron 11 of 13)","B3|SINE|B2",-2377,"NM_027112",69543,"Mm.440514","NM_027112","ENSMUSG00000078144","Capns2","2310005G05Rik|30K-2","calpain, small subunit 2","protein-coding"]
[2719,"chr9",122107051,122108565,"+",0,"NA","Intergenic","Intergenic",-9458,"NM_001164572",20623,"Mm.257989","NM_133741","ENSMUSG00000038145","Snrk","2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096","SNF related kinase","protein-coding"]
[1935,"chr4",133405527,133406963,"+",0,"NA","intron (NM_016981, intron 1 of 11)","MIR|SINE|MIR",36469,"NR_039582",100628620,null,"NR_039582","ENSMUSG00000092745","Mir5122","mmu-mir-5122|mu-mir-5122","microRNA 5122","ncRNA"]
[2690,"chr9",106159991,106160395,"+",0,"NA","Intergenic","Intergenic",-2055,"NM_174846",235582,"Mm.335420","NM_174846","ENSMUSG00000020258","Glyctk","6230410P16Rik|C430006L12","glycerate kinase","protein-coding"]
[581,"chr12",70148372,70148665,"+",0,"NA","Intergenic","Intergenic",-5653,"NM_001195033",100504285,"Mm.291105","NM_001195033",null,"Abhd12b","Gm804","abhydrolase domain containing 12B","protein-coding"]
[2727,"chr9",123208324,123208673,"+",0,"NA","intron (NM_133974, intron 1 of 8)","B4|SINE|B4",7540,"NM_133974",109332,"Mm.27519","NM_133974","ENSMUSG00000035498","Cdcp1","9030022E12Rik|AA409659|E030027H19Rik","CUB domain containing protein 1","protein-coding"]
[308,"chr10",96333112,96334798,"+",0,"NA","Intergenic","Intergenic",107748,"NR_110448",74881,"Mm.410819","NR_110448",null,"4930459C07Rik","-","RIKEN cDNA 4930459C07 gene","ncRNA"]
[678,"chr13",5844982,5845742,"+",0,"NA","Intergenic","Intergenic",12730,"NR_045891",71867,"Mm.179181","NR_045891","ENSMUSG00000100625","1700016G22Rik","-","RIKEN cDNA 1700016G22 gene","ncRNA"]
[1517,"chr2",51758560,51758807,"+",0,"NA","Intergenic","Intergenic",-26674,"NR_040639",433426,"Mm.244381","NR_040639","ENSMUSG00000085014","Gm13490","OTTMUSG00000012405","predicted gene 13490","ncRNA"]
[1975,"chr4",150545343,150545514,"+",0,"NA","intron (NM_001085492, intron 11 of 22)","intron (NM_001085492, intron 11 of 22)",106746,"NM_173774",242773,"Mm.29280","NM_173774",null,"Slc45a1","C230078B22|Dnb5","solute carrier family 45, member 1","protein-coding"]
[1973,"chr4",149572235,149572983,"+",0,"NA","Intergenic","Intergenic",-13859,"NM_001290989",65945,"Mm.38993","NM_023051","ENSMUSG00000039953","Clstn1","1810034E21Rik|Cst-1|Cstn1","calsyntenin 1","protein-coding"]
[1991,"chr5",23405433,23406078,"+",0,"NA","Intergenic","MTEb-int|LTR|ERVL-MaLR",28598,"NR_040469",269630,"Mm.425231","NR_040469","ENSMUSG00000073147","5031425E22Rik","-","RIKEN cDNA 5031425E22 gene","ncRNA"]
[927,"chr15",36347740,36348089,"+",0,"NA","Intergenic","Intergenic",-64767,"NM_013923",30945,"Mm.5181","NM_013923","ENSMUSG00000022280","Rnf19a","AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp","ring finger protein 19A","protein-coding"]
[301,"chr10",85972722,85972954,"+",0,"NA","intron (NM_177772, intron 12 of 15)","intron (NM_177772, intron 12 of 15)",-15045,"NM_145422",28088,"Mm.9257","NM_145422","ENSMUSG00000001783","Rtcb","AI255213|AI463255|D10Wsu52e|FAAP|HSPC117","RNA 2',3'-cyclic phosphate and 5'-OH ligase","protein-coding"]
[2302,"chr7",65780054,65780668,"+",0,"NA","Intergenic","Intergenic",-23691,"NR_045301",100503969,"Mm.383527","NR_045301",null,"1810008I18Rik","-","RIKEN cDNA 1810008I18 gene","ncRNA"]
[51,"chr1",72202595,72202719,"+",0,"NA","intron (NM_001005423, intron 1 of 4)","B1F1|SINE|Alu",9650,"NM_001005423",381269,"Mm.422636","NM_001005423","ENSMUSG00000039395","Mreg","Gm974|Wdt2|dsu","melanoregulin","protein-coding"]
[1758,"chr3",101032033,101032439,"+",0,"NA","Intergenic","Intergenic",-2741,"NM_001167906",630146,"Mm.190915","NM_001099332","ENSMUSG00000086564","Cd101","EWI-101|Gm1016|Gm734|Igsf2","CD101 antigen","protein-coding"]
[1822,"chr4",9065965,9066944,"+",0,"NA","Intergenic","Intergenic",-202863,"NM_028940",74438,"Mm.473368","NM_028940","ENSMUSG00000041216","Clvs1","4933402J24Rik|Clvl1|Rlbp1l1","clavesin 1","protein-coding"]
[456,"chr11",96383079,96383232,"+",0,"NA","Intergenic","Intergenic",17397,"NM_008266",15407,"Mm.890","NM_008266","ENSMUSG00000018973","Hoxb1","Hox-2.9","homeobox B1","protein-coding"]
[652,"chr12",104067047,104067501,"+",0,"NA","Intergenic","L1_Mus3|LINE|L1",-10685,"NR_002861",321018,"Mm.297023","NR_002861",null,"Serpina4-ps1","KALps|Klst","serine (or cysteine) peptidase inhibitor, clade A, member 4, pseudogene 1","pseudo"]
[1033,"chr15",101970871,101972519,"+",0,"NA","Intergenic","Intergenic",-17408,"NM_212487",332131,"Mm.325105","NM_212487","ENSMUSG00000050463","Krt78","2310030B04Rik|Kb40","keratin 78","protein-coding"]
[2400,"chr7",143690548,143692583,"+",0,"NA","intron (NM_024289, intron 21 of 21)","intron (NM_024289, intron 21 of 21)",-5690,"NR_131763",79201,"Mm.290780","NM_024290","ENSMUSG00000037613","Tnfrsf23","SOB|TNFRSFH23|Tnfrh1|Tnfrsf1al1|mDcTRAILR1|mSOB","tumor necrosis factor receptor superfamily, member 23","protein-coding"]
[2258,"chr7",16415232,16415372,"+",0,"NA","intron (NM_198631, intron 1 of 13)","B1_Mur4|SINE|Alu",14106,"NM_198631",330474,"Mm.333594","NM_198631","ENSMUSG00000059273","Zc3h4","Bwq1|Gm768|Kiaa1064-hp|mKIAA1064","zinc finger CCCH-type containing 4","protein-coding"]
[2034,"chr5",64810283,64811078,"+",0,"NA","intron (NM_008453, intron 1 of 5)","intron (NM_008453, intron 1 of 5)",7157,"NM_008453",16599,"Mm.392759","NM_008453","ENSMUSG00000029178","Klf3","9930027G08Rik|AL024007|Bklf|Tef-2","Kruppel-like factor 3 (basic)","protein-coding"]
[1539,"chr2",73023556,73023697,"+",0,"NA","Intergenic","L1MC1|LINE|L1",-43180,"NM_001018042",20687,"Mm.124328","NM_011450","ENSMUSG00000027109","Sp3","D130027J01Rik","trans-acting transcription factor 3","protein-coding"]
[2029,"chr5",64703038,64703378,"+",0,"NA","Intergenic","Intergenic",-92509,"NR_045078",100042198,"Mm.25191","NR_045078","ENSMUSG00000105402","Gm3716","Gm1683","predicted gene 3716","ncRNA"]
[796,"chr13",102594703,102594844,"+",0,"NA","Intergenic","Intergenic",-98785,"NM_008533",17079,"Mm.373974","NM_008533","ENSMUSG00000021624","Cd180","F630107B15|Ly78|RP105","CD180 antigen","protein-coding"]
[2349,"chr7",102322622,102323259,"+",0,"NA","intron (NM_009287, intron 1 of 11)","B1_Mus2|SINE|Alu",55116,"NM_009287",20866,"Mm.645","NM_009287","ENSMUSG00000030987","Stim1","SIM","stromal interaction molecule 1","protein-coding"]
[366,"chr11",35414142,35415838,"+",0,"NA","intron (NM_011412, intron 4 of 35)","intron (NM_011412, intron 4 of 35)",-201826,"NR_029799",723924,null,"NR_029799","ENSMUSG00000065583","Mir218-2","Mirn218-2|mir-218-2","microRNA 218-2","ncRNA"]
[844,"chr14",47624674,47625991,"+",0,"NA","Intergenic","RMER17C|LTR|ERVK",-23979,"NM_001293636",16709,"Mm.3110","NM_008477","ENSMUSG00000021843","Ktn1","-","kinectin 1","protein-coding"]
[1541,"chr2",73868736,73868892,"+",0,"NA","intron (NM_001284374, intron 3 of 11)","RMER1C|Other|Other",23825,"NM_001284371",11909,"Mm.209903","NM_009715","ENSMUSG00000027104","Atf2","Atf-2|CRE-BP|Creb2|D130078H02Rik|D18875|Tg(Gzma-Klra1)7Wum|mXBP","activating transcription factor 2","protein-coding"]
[2723,"chr9",123123181,123125651,"+",0,"NA","intron (NM_001081188, intron 3 of 7)","intron (NM_001081188, intron 3 of 7)",11185,"NM_001081188",66446,"Mm.41562","NM_001081188","ENSMUSG00000025785","Exosc7","2610002K22Rik|AV212732|mKIAA0116","exosome component 7","protein-coding"]
[272,"chr10",68039023,68040896,"+",0,"NA","intron (NM_001081346, intron 11 of 12)","intron (NM_001081346, intron 11 of 12)",60361,"NM_001081346",170799,"Mm.209844","NM_133244","ENSMUSG00000037846","Rtkn2","B130039D23Rik|Mbf|Plekhk1","rhotekin 2","protein-coding"]
[2343,"chr7",96244424,96246722,"+",0,"NA","intron (NM_001310760, intron 1 of 32)","intron (NM_001310760, intron 1 of 32)",-3851,"NR_030489",735284,null,"NR_030489","ENSMUSG00000076143","Mir708","Mirn708|mmu-mir-708","microRNA 708","ncRNA"]
[775,"chr13",75459201,75460312,"+",0,"NA","Intergenic","Intergenic",-185290,"NR_030451",751556,null,"NR_030451","ENSMUSG00000076236","Mir682","Mirn682|mir-682|mmu-mir-682","microRNA 682","ncRNA"]
[2518,"chr8",122905718,122906800,"+",0,"NA","intron (NR_037865, intron 4 of 13)","intron (NR_037865, intron 4 of 13)",57885,"NM_007662",12555,"Mm.1976","NM_007662","ENSMUSG00000031962","Cdh15","AI323380|Cdh14|Mcad","cadherin 15","protein-coding"]
[2108,"chr5",148964714,148965621,"+",0,"NA","Intergenic","Intergenic",14917,"NR_040686",71473,"Mm.90306","NR_040686","ENSMUSG00000079069","8430423G03Rik","-","RIKEN cDNA 8430423G03 gene","ncRNA"]
[20,"chr1",39940661,39941272,"+",0,"NA","intron (NM_001252200, intron 2 of 31)","intron (NM_001252200, intron 2 of 31)",40053,"NM_008696",26921,"Mm.491139","NM_008696","ENSMUSG00000026074","Map4k4","9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik","mitogen-activated protein kinase kinase kinase kinase 4","protein-coding"]
[2376,"chr7",128029783,128030151,"+",0,"NA","Intergenic","B1F1|SINE|Alu",25589,"NM_001079932",434246,"Mm.389924","NM_001079932","ENSMUSG00000042828","Trim72","BC067209|MG53","tripartite motif-containing 72","protein-coding"]
[888,"chr14",99893565,99894128,"+",0,"NA","intron (NM_010636, intron 6 of 6)","intron (NM_010636, intron 6 of 6)",255950,"NM_010636",16597,"Mm.396499","NM_010636",null,"Klf12","2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik","Kruppel-like factor 12","protein-coding"]
[1983,"chr5",4767405,4767945,"+",0,"NA","Intergenic","Intergenic",-9459,"NM_021457",14362,"Mm.246003","NM_021457","ENSMUSG00000044674","Fzd1","AW227548|FZ-1|Fz1","frizzled homolog 1 (Drosophila)","protein-coding"]
[1011,"chr15",96878441,96880779,"+",0,"NA","Intergenic","Intergenic",176346,"NM_027052",69354,"Mm.250980","NM_027052","ENSMUSG00000022464","Slc38a4","1110012E16Rik|1700012A18Rik|Ata3|mATA3|mNAT3","solute carrier family 38, member 4","protein-coding"]
[1754,"chr3",97998695,97999130,"+",0,"NA","Intergenic","Intergenic",-14626,"NM_010928",18129,"Mm.485843","NM_010928","ENSMUSG00000027878","Notch2","AI853703|N2","notch 2","protein-coding"]
[1627,"chr2",155328926,155330638,"+",0,"NA","intron (NM_001004721, intron 5 of 11)","intron (NM_001004721, intron 5 of 11)",-27035,"NR_030475",735287,null,"NR_030475","ENSMUSG00000076216","Mir695","Mirn695|mmu-mir-695","microRNA 695","ncRNA"]
[1161,"chr17",5394790,5396252,"+",0,"NA","Intergenic","Intergenic",23246,"NM_175349",106557,"Mm.432764","NM_175349","ENSMUSG00000101959","Ldhal6b","4933402O15Rik|AI326310|LDHL|Ldhal","lactate dehydrogenase A-like 6B","protein-coding"]
[468,"chr11",98392527,98393851,"+",0,"NA","intron (NM_001033537, intron 3 of 7)","MLTR14|LTR|ERV1",6557,"NM_008890",18948,"Mm.57030","NM_008890",null,"Pnmt","Pent","phenylethanolamine-N-methyltransferase","protein-coding"]
[2093,"chr5",134333064,134333326,"+",0,"NA","Intergenic","Intergenic",-18435,"NM_010365",14886,"Mm.261570","NM_010365","ENSMUSG00000060261","Gtf2i","6030441I21Rik|BAP-135|Diws1t|GtfII-I|Spin|TFII-I|WBSCR6","general transcription factor II I","protein-coding"]
[1019,"chr15",100050666,100050962,"+",0,"NA","intron (NM_001159361, intron 1 of 37)","intron (NM_001159361, intron 1 of 37)",12150,"NM_001159361",239667,"Mm.243658","NM_172819","ENSMUSG00000023026","Dip2b","4932422C22|AI317237|AI854602|mKIAA1463","DIP2 disco-interacting protein 2 homolog B (Drosophila)","protein-coding"]
[700,"chr13",37557631,37558679,"+",0,"NA","Intergenic","Intergenic",212810,"NM_010745",17084,"Mm.2639","NM_010745","ENSMUSG00000021423","Ly86","MD-1|MD1","lymphocyte antigen 86","protein-coding"]
[1927,"chr4",129823495,129823837,"+",0,"NA","intron (NM_001164745, intron 1 of 5)","intron (NM_001164745, intron 1 of 5)",2958,"NM_001164745",19244,"Mm.193688","NM_008974","ENSMUSG00000028788","Ptp4a2","Prl-2","protein tyrosine phosphatase 4a2","protein-coding"]
[78,"chr1",92683156,92684330,"+",0,"NA","Intergenic","Intergenic",-34902,"NM_153114",260301,"Mm.219545","NM_153114","ENSMUSG00000044055","Otos","OTOSP","otospiralin","protein-coding"]
[1380,"chr19",20393491,20394425,"+",0,"NA","Intergenic","Intergenic",-3287,"NM_010730",16952,"Mm.248360","NM_010730","ENSMUSG00000024659","Anxa1","Anx-1|Anx-A1|C430014K04Rik|Lpc-1|Lpc1","annexin A1","protein-coding"]
[990,"chr15",81997241,81998739,"+",0,"NA","intron (NM_134095, intron 5 of 5)","ID_B1|SINE|B4",17450,"NM_025503",66346,"Mm.54292","NM_025503","ENSMUSG00000061633","1700029P11Rik","-","RIKEN cDNA 1700029P11 gene","protein-coding"]
[413,"chr11",69417404,69418679,"+",0,"NA","Intergenic","CpG",-4366,"NM_001017426",216850,"Mm.261201","NM_001017426","ENSMUSG00000018476","Kdm6b","1700064E03Rik|BC038313|Jmjd3|mKIAA0346","KDM1 lysine (K)-specific demethylase 6B","protein-coding"]
[294,"chr10",80752564,80752895,"+",0,"NA","Intergenic","(GAAAA)n|Simple_repeat|Simple_repeat",-2477,"NM_199322",208266,"Mm.152371","NM_199322","ENSMUSG00000061589","Dot1l","A630076O07|AW907654|Dot1|KMT4|mDot1","DOT1-like, histone H3 methyltransferase (S. cerevisiae)","protein-coding"]
[2316,"chr7",73536500,73541771,"+",0,"NA","TTS (NR_037569)","TTS (NR_037569)",2611,"NM_001081345",244059,"Mm.34539","NM_001081345","ENSMUSG00000078671","Chd2","2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2","chromodomain helicase DNA binding protein 2","protein-coding"]
[2218,"chr6",122810424,122810688,"+",0,"NA","Intergenic","Intergenic",-9628,"NM_021899",60611,"Mm.87142","NM_021899","ENSMUSG00000003154","Foxj2","Fhx","forkhead box J2","protein-coding"]
[1614,"chr2",145821973,145822794,"+",0,"NA","intron (NM_028724, intron 3 of 12)","intron (NM_028724, intron 3 of 12)",36267,"NM_028724",74030,"Mm.228799","NM_028724","ENSMUSG00000001768","Rin2","2010003K16Rik|4632403N06Rik|AW821980|RASSF4","Ras and Rab interactor 2","protein-coding"]
[1442,"chr2",9358127,9358553,"+",0,"NA","Intergenic","Intergenic",168825,"NR_038180",73438,"Mm.23558","NR_038180","ENSMUSG00000085580","1700061F12Rik","-","RIKEN cDNA 1700061F12 gene","ncRNA"]
[764,"chr13",63140431,63140594,"+",0,"NA","intron (NM_001289924, intron 5 of 16)","intron (NM_001289924, intron 5 of 16)",-99517,"NR_110520",72061,"Mm.188105","NM_028079","ENSMUSG00000021458","2010111I01Rik","2300006M17Rik|AP-O|Aopep|mir-23b|mir-24-1|mir-27b","RIKEN cDNA 2010111I01 gene","protein-coding"]
[349,"chr11",16791169,16791722,"+",0,"NA","intron (NM_207655, intron 1 of 27)","intron (NM_207655, intron 1 of 27)",39242,"NM_007912",13649,"Mm.8534","NM_007912","ENSMUSG00000020122","Egfr","9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2","epidermal growth factor receptor","protein-coding"]
[1743,"chr3",95066004,95066323,"+",0,"NA","intron (NM_008847, intron 9 of 14)","intron (NM_008847, intron 9 of 14)",-23549,"NM_008951",19185,"Mm.2261","NM_008951","ENSMUSG00000005625","Psmd4","Af1|Mcb1|angiocidin","proteasome (prosome, macropain) 26S subunit, non-ATPase, 4","protein-coding"]
[2075,"chr5",121454522,121455597,"+",0,"NA","intron (NM_029912, intron 1 of 9)","Lx8b|LINE|L1",2350,"NM_029912",77462,"Mm.358781","NM_029912","ENSMUSG00000029452","Tmem116","4930406A18Rik|4930513P12Rik|C030022K24Rik","transmembrane protein 116","protein-coding"]
[1981,"chr4",154878243,154878353,"+",0,"NA","intron (NM_013783, intron 2 of 23)","B4|SINE|B4",8713,"NM_013783",27390,"Mm.116944","NM_013783","ENSMUSG00000058183","Mmel1","Mell1|NEP2|NEPII|Nl1|SEP","membrane metallo-endopeptidase-like 1","protein-coding"]
[2081,"chr5",123693897,123696005,"+",0,"NA","Intergenic","B1_Mur1|SINE|Alu",-10590,"NM_001291229",56430,"Mm.241109","NM_019765","ENSMUSG00000049550","Clip1","1110007I12Rik|4631429H07Rik|AV017631|C81039|CLIP-170|CLIP170|CYLN1|Clip50|Rsn|mKIAA4046|restin","CAP-GLY domain containing linker protein 1","protein-coding"]
[1383,"chr19",21174785,21175328,"+",0,"NA","Intergenic","Intergenic",70346,"NR_126458",75354,"Mm.243873","NR_126458",null,"4930554I06Rik","-","RIKEN cDNA 4930554I06 gene","ncRNA"]
[606,"chr12",75733085,75733914,"+",0,"NA","intron (NM_030750, intron 1 of 2)","(TC)n|Simple_repeat|Simple_repeat",2230,"NM_030750",81535,"Mm.280199","NM_030750","ENSMUSG00000021054","Sgpp1","AI463453|SPP|SPP1|Spph1","sphingosine-1-phosphate phosphatase 1","protein-coding"]
[137,"chr1",135892190,135896654,"+",0,"NA","intron (NM_001313701, intron 2 of 13)","intron (NM_001313701, intron 2 of 13)",24785,"NM_001313701",18772,"Mm.4494","NM_019645","ENSMUSG00000026413","Pkp1","-","plakophilin 1","protein-coding"]
[1414,"chr19",43709500,43709618,"+",0,"NA","intron (NM_053103, intron 5 of 12)","intron (NM_053103, intron 5 of 12)",19870,"NM_053103",93685,"Mm.248237","NM_053103","ENSMUSG00000025192","Entpd7","1810012B13Rik|1810020C02Rik|2810003F23Rik|LALP1|Lysal2","ectonucleoside triphosphate diphosphohydrolase 7","protein-coding"]
[2522,"chr8",123025617,123025919,"+",0,"NA","intron (NR_037865, intron 1 of 13)","intron (NR_037865, intron 1 of 13)",16516,"NR_037865",77087,"Mm.31567","NM_001081379","ENSMUSG00000035569","Ankrd11","2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod","ankyrin repeat domain 11","protein-coding"]
[1855,"chr4",56239117,56239246,"+",0,"NA","Intergenic","Intergenic",502244,"NM_025271",11471,"Mm.251434","NM_025271","ENSMUSG00000070980","Actl7b","Tact1","actin-like 7b","protein-coding"]
[666,"chr12",117448821,117448941,"+",0,"NA","Intergenic","RMER10A|LTR|ERVL",-67598,"NM_175930",217944,"Mm.227642","NM_175930","ENSMUSG00000041992","Rapgef5","4932413M22|C86120|D030051B22Rik|GFR|Mrgef|mKIAA0277|mmr-gef","Rap guanine nucleotide exchange factor (GEF) 5","protein-coding"]
[432,"chr11",79909055,79909300,"+",0,"NA","Intergenic","Intergenic",53210,"NM_144826",216987,"Mm.274961","NM_144826","ENSMUSG00000035575","Utp6","4732497O03Rik|HCA66","UTP6, small subunit (SSU) processome component, homolog (yeast)","protein-coding"]
[1074,"chr16",25805750,25806196,"+",0,"NA","intron (NM_001127262, intron 1 of 10)","intron (NM_001127262, intron 1 of 10)",4057,"NM_001127264",22061,"Mm.20894","NM_011641","ENSMUSG00000022510","Trp63","AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1","transformation related protein 63","protein-coding"]
[860,"chr14",64884928,64885435,"+",0,"NA","intron (NM_177338, intron 4 of 9)","intron (NM_177338, intron 4 of 9)",64666,"NM_177338",219150,"Mm.344074","NM_177338","ENSMUSG00000021972","Hmbox1","AI451877|AI604847|F830020C16Rik","homeobox containing 1","protein-coding"]
[2308,"chr7",67492001,67493579,"+",0,"NA","Intergenic","Intergenic",-119932,"NM_001291195",17258,"Mm.132788","NM_001033713","ENSMUSG00000030557","Mef2a","A430079H05Rik","myocyte enhancer factor 2A","protein-coding"]
[1567,"chr2",102957930,102959421,"+",0,"NA","Intergenic","L2a|LINE|L2",-57010,"NM_001039150",12505,"Mm.423621","NM_009851","ENSMUSG00000005087","Cd44","AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1","CD44 antigen","protein-coding"]
[1063,"chr16",24055873,24057161,"+",0,"NA","Intergenic","Intergenic",-67905,"NM_009744",12053,"Mm.347398","NM_009744","ENSMUSG00000022508","Bcl6","Bcl5","B cell leukemia/lymphoma 6","protein-coding"]
[1776,"chr3",108583544,108588463,"+",0,"NA","Intergenic","AT_rich|Low_complexity|Low_complexity",-5275,"NM_181400",99512,"Mm.285968","NM_181400","ENSMUSG00000040389","Wdr47","1810073M12Rik|AA552998|mKIAA0893","WD repeat domain 47","protein-coding"]
[2565,"chr9",42252553,42252843,"+",0,"NA","Intergenic","Intergenic",11602,"NM_172769",235293,"Mm.32700","NM_172769","ENSMUSG00000032018","Sc5d","A830037K02|A830073K23Rik|Sc5dl","sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)","protein-coding"]
[2158,"chr6",54964303,54965503,"+",0,"NA","intron (NM_172729, intron 1 of 11)","ID4_|SINE|ID",6758,"NM_001171007",107607,"Mm.28498","NM_172729","ENSMUSG00000038058","Nod1","C230079P11|Card4|F830007N14Rik|Nlrc1","nucleotide-binding oligomerization domain containing 1","protein-coding"]
[2576,"chr9",43324180,43326130,"+",0,"NA","intron (NM_023655, intron 5 of 8)","intron (NM_023655, intron 5 of 8)",14392,"NM_023655",72169,"Mm.273277","NM_023655","ENSMUSG00000032013","Trim29","1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726","tripartite motif-containing 29","protein-coding"]
[2415,"chr8",23466911,23467048,"+",0,"NA","Intergenic","Intergenic",55477,"NM_013834",20377,"Mm.281691","NM_013834","ENSMUSG00000031548","Sfrp1","2210415K03Rik|AW011917|AW107218|AW742929|sFRP-1","secreted frizzled-related protein 1","protein-coding"]
[2362,"chr7",112188064,112188709,"+",0,"NA","Intergenic","Intergenic",-29329,"NM_015814",50781,"Mm.55143","NM_015814","ENSMUSG00000030772","Dkk3","AW061014|C87148","dickkopf homolog 3 (Xenopus laevis)","protein-coding"]
[708,"chr13",38118037,38118379,"+",0,"NA","Intergenic","MTD|LTR|ERVL-MaLR",-33086,"NM_023842",109620,"Mm.355327","NM_023842","ENSMUSG00000054889","Dsp","2300002E22Rik|5730453H04Rik|AA407887|AA407888|AW109828|DP|rul","desmoplakin","protein-coding"]
[2583,"chr9",43874082,43874857,"+",0,"NA","Intergenic","MER21C|LTR|ERVL",129893,"NM_021424",58235,"Mm.335096","NM_021424","ENSMUSG00000032012","Pvrl1","AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|nectin-1","poliovirus receptor-related 1","protein-coding"]
[2589,"chr9",46149592,46149883,"+",0,"NA","intron (NM_027498, intron 3 of 24)","intron (NM_027498, intron 3 of 24)",-78893,"NM_009692",11806,"Mm.26743","NM_009692","ENSMUSG00000032083","Apoa1","Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I","apolipoprotein A-I","protein-coding"]
[1601,"chr2",137760056,137760817,"+",0,"NA","Intergenic","Intergenic",-496148,"NM_001025431",228662,"Mm.153405","NM_145534","ENSMUSG00000062098","Btbd3","mKIAA0952","BTB (POZ) domain containing 3","protein-coding"]
[710,"chr13",38127362,38128203,"+",0,"NA","Intergenic","Intergenic",-23512,"NM_023842",109620,"Mm.355327","NM_023842","ENSMUSG00000054889","Dsp","2300002E22Rik|5730453H04Rik|AA407887|AA407888|AW109828|DP|rul","desmoplakin","protein-coding"]
[1656,"chr2",169590892,169591002,"+",0,"NA","Intergenic","Intergenic",-42699,"NM_080455",228911,"Mm.315789","NM_080455","ENSMUSG00000047907","Tshz2","2900073F20Rik|B830045G17|Mtsh2|Sdccag33l|Tsh2|Zfp218|mKIAA4248|teashirt2","teashirt zinc finger family member 2","protein-coding"]
[323,"chr10",108538290,108538911,"+",0,"NA","intron (NM_001252342, intron 9 of 10)","intron (NM_001252342, intron 9 of 10)",161560,"NM_203660",368203,"Mm.452758","NM_203660",null,"Gm5136","C6.1AL|EG368203","predicted gene 5136","protein-coding"]
[856,"chr14",63131349,63132833,"+",0,"NA","intron (NM_007798, intron 1 of 9)","intron (NM_007798, intron 1 of 9)",9629,"NM_007798",13030,"Mm.236553","NM_007798","ENSMUSG00000021939","Ctsb","CB","cathepsin B","protein-coding"]
[2142,"chr6",41576200,41577589,"+",0,"NA","Intergenic","Intergenic",-28588,"NM_001146351",13848,"Mm.271976","NM_007680","ENSMUSG00000029869","Ephb6","Cekl|Mep","Eph receptor B6","protein-coding"]
[1834,"chr4",32405531,32406031,"+",0,"NA","Intergenic","Intergenic",-11654,"NM_001109661",12014,"Mm.491223","NM_007521","ENSMUSG00000040270","Bach2","E030004N02Rik","BTB and CNC homology 2","protein-coding"]
[1664,"chr2",172644253,172644565,"+",0,"NA","Intergenic","Intergenic",93418,"NM_001159696",21420,"Mm.3629","NM_009335","ENSMUSG00000028640","Tfap2c","AA409384|AP2gamma|Ap-2.2|Stra2|Tcfap2c","transcription factor AP-2, gamma","protein-coding"]
[112,"chr1",131221811,131222808,"+",0,"NA","intron (NM_018750, intron 1 of 5)","intron (NM_018750, intron 1 of 5)",-22124,"NM_001311094",54354,"Mm.248291","NM_018750","ENSMUSG00000026430","Rassf5","1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl","Ras association (RalGDS/AF-6) domain family member 5","protein-coding"]
[545,"chr12",14302056,14303548,"+",0,"NA","Intergenic","Intergenic",41268,"NR_045003",791361,"Mm.217963","NR_045003",null,"Gm16497","ENSMUSG00000066623","predicted gene 16497","ncRNA"]
[191,"chr1",181257156,181257270,"+",0,"NA","Intergenic","Intergenic",-45235,"NM_145514",226757,"Mm.289082","NM_145514","ENSMUSG00000038733","Wdr26","1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7","WD repeat domain 26","protein-coding"]
[2733,"chrX",75832506,75835362,"+",0,"NA","intron (NM_001166453, intron 1 of 15)","intron (NM_001166453, intron 1 of 15)",9087,"NM_001166454",102866,"Mm.28777","NM_145629","ENSMUSG00000016382","Pls3","AI115446|AL024105","plastin 3 (T-isoform)","protein-coding"]
[2467,"chr8",84790903,84791246,"+",0,"NA","intron (NM_001081982, intron 1 of 9)","intron (NM_001081982, intron 1 of 9)",9264,"NM_010906",18032,"Mm.9394","NM_010906","ENSMUSG00000001911","Nfix","CTF|NF-I/X|NF1-X|NFI-X","nuclear factor I/X","protein-coding"]
[187,"chr1",180829674,180831851,"+",0,"NA","Intergenic","Intergenic",-17157,"NM_008210",15078,"Mm.138832","NM_008210","ENSMUSG00000060743","H3f3a","H3.3A","H3 histone, family 3A","protein-coding"]
[588,"chr12",70647279,70647494,"+",0,"NA","intron (NR_037248, intron 4 of 4)","HAL1|LINE|L1",-178128,"NM_028127",319710,"Mm.2962","NM_028127","ENSMUSG00000048285","Frmd6","2610019M19Rik|4930488L10Rik|AW212977|Willin","FERM domain containing 6","protein-coding"]
[1684,"chr3",51577695,51578201,"+",0,"NA","Intergenic","Intergenic",-17125,"NM_080793",73251,"Mm.192111","NM_080793","ENSMUSG00000037111","Setd7","1600028F23Rik|H3K4MT|KMT7|Set7|Set7/9|mKIAA1717","SET domain containing (lysine methyltransferase) 7","protein-coding"]
[756,"chr13",63066962,63067439,"+",0,"NA","intron (NM_001289924, intron 4 of 16)","intron (NM_001289924, intron 4 of 16)",102307,"NM_001289924",72061,"Mm.188105","NM_028079","ENSMUSG00000021458","2010111I01Rik","2300006M17Rik|AP-O|Aopep|mir-23b|mir-24-1|mir-27b","RIKEN cDNA 2010111I01 gene","protein-coding"]
[2326,"chr7",79301294,79301768,"+",0,"NA","intron (NM_018811, intron 3 of 10)","intron (NM_018811, intron 3 of 10)",28265,"NM_018811",54608,"Mm.365490","NM_018811",null,"Abhd2","2210009N18Rik|LABH2|Labh-2","abhydrolase domain containing 2","protein-coding"]
[1283,"chr18",20214457,20214634,"+",0,"NA","Intergenic","Intergenic",-32795,"NM_181680",211924,"Mm.391118","NM_181680",null,"Dsg1c","9330156N18|Dsg1gamma|Dsg6|dsg1g","desmoglein 1 gamma","protein-coding"]
[262,"chr10",61670446,61670557,"+",0,"NA","intron (NM_026438, intron 9 of 10)","intron (NM_026438, intron 9 of 10)",9789,"NR_126477",75539,null,"NR_126477",null,"1700022H01Rik","-","RIKEN cDNA 1700022H01 gene","ncRNA"]
[1944,"chr4",135844311,135844454,"+",0,"NA","Intergenic","Intergenic",-11689,"NM_001284196",14105,"Mm.10229","NM_010178","ENSMUSG00000028676","Srsf10","FUSIP2|Fusip1|NSSR1|NSSR2|Nssr|SRrp40|Sfrs13a|Srsf13a|TASR|TASR1|TASR2","serine/arginine-rich splicing factor 10","protein-coding"]
[212,"chr1",193564230,193564660,"+",0,"NA","Intergenic","Intergenic",-56915,"NR_029592",387201,null,"NR_029592","ENSMUSG00000065533","Mir205","Mirn205|mir-205|mmu-mir-205","microRNA 205","ncRNA"]
[2436,"chr8",46687001,46687246,"+",0,"NA","Intergenic","Intergenic",52392,"NR_045750",100503498,"Mm.187358","NR_045750","ENSMUSG00000097534","Gm16675","-","predicted gene, 16675","ncRNA"]
[1331,"chr18",65566203,65566586,"+",0,"NA","intron (NR_105742, intron 1 of 6)","B1_Mus1|SINE|Alu",-13836,"NM_207255",328977,"Mm.286232","NM_207255","ENSMUSG00000042439","Zfp532","C530030I18Rik|Znf532|mKIAA1629","zinc finger protein 532","protein-coding"]
[2590,"chr9",47167791,47168192,"+",0,"NA","Intergenic","Intergenic",169250,"NM_001243258",215467,"Mm.246572","NM_001243258",null,"Gm4791","D930036J05","predicted gene 4791","protein-coding"]
[2383,"chr7",130032078,130032749,"+",0,"NA","Intergenic","L1MB5|LINE|L1",70248,"NR_046077",100043150,"Mm.334264","NR_046077",null,"Gm4265","-","predicted gene 4265","ncRNA"]
[542,"chr12",8859119,8860549,"+",0,"NA","Intergenic","Intergenic",-61473,"NM_008640",17775,"Mm.30071","NM_008640","ENSMUSG00000020585","Laptm4a","AA286466|LAPTM4|MTP|Mtrp|mKIAA0108","lysosomal-associated protein transmembrane 4A","protein-coding"]
[1305,"chr18",42037136,42037793,"+",0,"NA","Intergenic","Intergenic",-16246,"NM_172966",269016,"Mm.45472","NM_172966","ENSMUSG00000057719","Sh3rf2","2310046K19|9130023G24Rik|AI452083|Ppp1r39|RNF158","SH3 domain containing ring finger 2","protein-coding"]
[961,"chr15",59511262,59512160,"+",0,"NA","intron (NM_026746, intron 4 of 6)","L2a|LINE|L2",-136943,"NM_144549",211770,"Mm.40298","NM_144549","ENSMUSG00000032501","Trib1","A530090O15Rik|TRB-1|Trb1","tribbles homolog 1 (Drosophila)","protein-coding"]
[2686,"chr9",104156392,104156675,"+",0,"NA","intron (NM_001163026, intron 55 of 55)","intron (NM_001163026, intron 55 of 55)",-29890,"NM_145700",252837,"Mm.269254","NM_145700","ENSMUSG00000079355","Ackr4","A630091E18Rik|CCBP2|CCR11|CCX-CKR|CCX-CKR1|Ccrl1|Cmkbrl1|PPR1|VSHK1","atypical chemokine receptor 4","protein-coding"]
[2099,"chr5",139819096,139819748,"+",0,"NA","Intergenic","Intergenic",-5139,"NM_001161548",231832,"Mm.482655","NM_144914","ENSMUSG00000036687","Tmem184a","Sdmg1","transmembrane protein 184a","protein-coding"]
[1662,"chr2",170306622,170306995,"+",0,"NA","Intergenic","Intergenic",-49553,"NR_040610",73303,"Mm.443297","NR_040610","ENSMUSG00000086999","Bcas1os2","1700040N02Rik","breast carcinoma amplified sequence 1, opposite strand 2","ncRNA"]
[2476,"chr8",91406977,91407091,"+",0,"NA","intron (NM_011936, intron 2 of 8)","intron (NM_011936, intron 2 of 8)",93509,"NM_011936",26383,"Mm.4375","NM_011936","ENSMUSG00000055932","Fto","AW743446|mKIAA1752","fat mass and obesity associated","protein-coding"]
[574,"chr12",69446952,69448947,"+",0,"NA","Intergenic","Intergenic",27601,"NR_038060",76062,"Mm.380755","NR_038060",null,"5830428M24Rik","100040862|Gm3007","RIKEN cDNA 5830428M24 gene","ncRNA"]
[170,"chr1",164294581,164295129,"+",0,"NA","intron (NM_001160208, intron 7 of 7)","intron (NM_001160208, intron 7 of 7)",12629,"NM_001160209",66352,"Mm.33285","NM_025505","ENSMUSG00000026577","Blzf1","1700030G05Rik|Blzf1l|Golgin-45|Jem-1","basic leucine zipper nuclear factor 1","protein-coding"]
[1921,"chr4",129034005,129036114,"+",0,"NA","Intergenic","PB1D11|SINE|Alu",-23212,"NM_029219",75234,"Mm.259672","NM_029219","ENSMUSG00000028793","Rnf19b","4930534K13Rik|4930555L03Rik|Ibrdc3","ring finger protein 19B","protein-coding"]
[660,"chr12",111556394,111557181,"+",0,"NA","Intergenic","Intergenic",15841,"NR_033168",100316932,"Mm.484709","NR_033168","ENSMUSG00000064493","Snora28","MBI-13","small nucleolar RNA, H/ACA box 28","snoRNA"]
[26,"chr1",51505399,51506021,"+",0,"NA","Intergenic","Intergenic",-27311,"NM_001310549",109019,"Mm.196290","NM_028696","ENSMUSG00000026107","Nabp1","4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2","nucleic acid binding protein 1","protein-coding"]
[2116,"chr6",7848191,7848992,"+",0,"NA","intron (NM_052993, intron 1 of 3)","intron (NM_052993, intron 1 of 3)",3367,"NM_052993",94192,"Mm.102752","NM_052993",null,"C1galt1","2210410E06Rik|AV284120|T-synthase","core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1","protein-coding"]
[977,"chr15",74967847,74968270,"+",0,"NA","Intergenic","Intergenic",12952,"NM_001164040",17069,"Mm.788","NM_008529","ENSMUSG00000022587","Ly6e","Ly67|RIG-E|Sca-2|TSA-1|Tsa1","lymphocyte antigen 6 complex, locus E","protein-coding"]
[2250,"chr6",139599522,139600787,"+",0,"NA","Intergenic","Intergenic",-98245,"NM_001128090",632971,"Mm.475610","NM_001128090",null,"Rergl","EG632971","RERG/RAS-like","protein-coding"]
[566,"chr12",54619268,54621853,"+",0,"NA","Intergenic","Intergenic",25452,"NR_035439",100316682,null,"NR_035439","ENSMUSG00000106344","Mir1892","Mirn1892|mir-1892|mmu-mir-1892","microRNA 1892","ncRNA"]
[526,"chr11",117932739,117933919,"+",0,"NA","Intergenic","Intergenic",36037,"NM_007707",12702,"Mm.3468","NM_007707","ENSMUSG00000053113","Socs3","Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3","suppressor of cytokine signaling 3","protein-coding"]
[1901,"chr4",117189385,117190126,"+",0,"NA","Intergenic","Intergenic",-7131,"NM_134471",73804,"Mm.247651","NM_134471","ENSMUSG00000028678","Kif2c","4930402F02Rik|ESTM5|Knsl6|MCAK|X83316","kinesin family member 2C","protein-coding"]
[359,"chr11",22628785,22629407,"+",0,"NA","Intergenic","Intergenic",116813,"NM_153596",103765,"Mm.221274","NM_153596","ENSMUSG00000049904","Tmem17","AI503894|AW049890","transmembrane protein 17","protein-coding"]
[1229,"chr17",65905823,65906530,"+",0,"NA","Intergenic","Intergenic",-20421,"NM_009067",19765,"Mm.17009","NM_009067","ENSMUSG00000024096","Ralbp1","RLIP76|Rip1","ralA binding protein 1","protein-coding"]
[2299,"chr7",45656359,45656969,"+",0,"NA","intron (NM_001271993, intron 1 of 2)","intron (NM_001271993, intron 1 of 2)",9730,"NM_018876",14344,"Mm.290046","NM_018876","ENSMUSG00000055978","Fut2","-","fucosyltransferase 2","protein-coding"]
[108,"chr1",130743075,130746698,"+",0,"NA","TTS (NM_177604)","TTS (NM_177604)",12910,"NM_177604",212439,"Mm.268547","NM_177604","ENSMUSG00000042510","AA986860","E030025M07|Sarg","expressed sequence AA986860","protein-coding"]
[604,"chr12",75701582,75703581,"+",0,"NA","Intergenic","Intergenic",-33044,"NM_028203",72338,"Mm.341719","NM_028203","ENSMUSG00000045690","Wdr89","2600001A11Rik","WD repeat domain 89","protein-coding"]
[2614,"chr9",69084979,69085156,"+",0,"NA","intron (NM_013646, intron 1 of 10)","intron (NM_013646, intron 1 of 10)",-204774,"NM_001289916",19883,"Mm.378450","NM_013646","ENSMUSG00000032238","Rora","9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26","RAR-related orphan receptor alpha","protein-coding"]
[2608,"chr9",66730200,66731767,"+",0,"NA","intron (NM_001306148, intron 2 of 9)","C-rich|Low_complexity|Low_complexity",17297,"NM_001306148",76459,"Mm.277921","NM_178396","ENSMUSG00000032373","Car12","2310047E01Rik|AI314958|CA-XII|Ca12","carbonic anyhydrase 12","protein-coding"]
[1001,"chr15",95804571,95805570,"+",0,"NA","intron (NM_175344, intron 1 of 19)","intron (NM_175344, intron 1 of 19)",14227,"NM_001253813",105722,"Mm.38087","NM_175344","ENSMUSG00000064210","Ano6","2900059G15Rik|AA407480|AW554778|F730003B03Rik|Tmem16f","anoctamin 6","protein-coding"]
[232,"chr10",18869092,18879161,"+",0,"NA","Intergenic","MIR|SINE|MIR",29055,"NM_022032",64058,"Mm.28209","NM_022032","ENSMUSG00000019851","Perp","1110017A08Rik|KCP1|KRTCAP1|PIGPC1|THW","PERP, TP53 apoptosis effector","protein-coding"]
[477,"chr11",99106072,99107395,"+",0,"NA","Intergenic","Intergenic",-17427,"NM_172564",217169,"Mm.262067","NM_172564","ENSMUSG00000017607","Tns4","9930017A07Rik|AA589547|AU016405|Cten","tensin 4","protein-coding"]
[1338,"chr18",66472471,66472817,"+",0,"NA","Intergenic","RMER15|LTR|ERVL",14040,"NM_021451",58801,"Mm.271878","NM_021451","ENSMUSG00000024521","Pmaip1","Noxa","phorbol-12-myristate-13-acetate-induced protein 1","protein-coding"]
[2623,"chr9",70266110,70266282,"+",0,"NA","intron (NM_181072, intron 1 of 27)","B1_Mur4|SINE|Alu",58846,"NM_181072",71602,"Mm.249311","NM_181072","ENSMUSG00000032220","Myo1e","2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3","myosin IE","protein-coding"]
[1182,"chr17",26502442,26502870,"+",0,"NA","Intergenic","Intergenic",5816,"NM_013642",19252,"Mm.239041","NM_013642","ENSMUSG00000024190","Dusp1","3CH134|MKP1|Ptpn16|U19515|erp|mkp-1","dual specificity phosphatase 1","protein-coding"]
[225,"chr10",18007570,18008172,"+",0,"NA","Intergenic","Intergenic",15381,"NM_028440",73112,"Mm.276041","NM_028440","ENSMUSG00000078453","Abracl","1700028I04Rik|3110003A17Rik","ABRA C-terminal like","protein-coding"]
[1447,"chr2",9732987,9733290,"+",0,"NA","Intergenic","Intergenic",145462,"NM_008091",14462,"Mm.313866","NM_008091","ENSMUSG00000015619","Gata3","Gata-3|jal","GATA binding protein 3","protein-coding"]
[330,"chr10",116734057,116735011,"+",0,"NA","intron (NR_131036, intron 2 of 2)","G-rich|Low_complexity|Low_complexity",5281,"NR_131036",75878,"Mm.370607","NR_131036",null,"4930579P08Rik","-","RIKEN cDNA 4930579P08 gene","ncRNA"]
[142,"chr1",138354996,138356273,"+",0,"NA","Intergenic","Intergenic",81896,"NM_177397",338375,"Mm.114424","NM_177397","ENSMUSG00000026394","Atp6v1g3","-","ATPase, H+ transporting, lysosomal V1 subunit G3","protein-coding"]
[207,"chr1",193514294,193516867,"+",0,"NA","Intergenic","MTD|LTR|ERVL-MaLR",-8050,"NR_029592",387201,null,"NR_029592","ENSMUSG00000065533","Mir205","Mirn205|mir-205|mmu-mir-205","microRNA 205","ncRNA"]
[1510,"chr2",36221813,36222808,"+",0,"NA","Intergenic","Intergenic",-8116,"NM_008969",19224,"Mm.275434","NM_008969","ENSMUSG00000047250","Ptgs1","COX1|Cox-1|Cox-3|PGHS-1|PHS 1|Pghs1","prostaglandin-endoperoxide synthase 1","protein-coding"]
[48,"chr1",71396567,71399899,"+",0,"NA","intron (NM_175210, intron 2 of 52)","intron (NM_175210, intron 2 of 52)",16677,"NM_175210",74591,"Mm.159251","NM_175210","ENSMUSG00000050296","Abca12","4832428G11Rik|4833417A11Rik","ATP-binding cassette, sub-family A (ABC1), member 12","protein-coding"]
[1857,"chr4",56490606,56492881,"+",0,"NA","Intergenic","G-rich|Low_complexity|Low_complexity",249682,"NM_025271",11471,"Mm.251434","NM_025271","ENSMUSG00000070980","Actl7b","Tact1","actin-like 7b","protein-coding"]
[360,"chr11",23140640,23141201,"+",0,"NA","Intergenic","Intergenic",-11220,"NR_131065",76993,"Mm.59224","NR_131065",null,"1700061J23Rik","-","RIKEN cDNA 1700061J23 gene","ncRNA"]
[2321,"chr7",74617074,74619645,"+",0,"NA","Intergenic","Intergenic",-63579,"NM_001038643",108116,"Mm.425467","NM_023908","ENSMUSG00000025790","Slco3a1","5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11","solute carrier organic anion transporter family, member 3a1","protein-coding"]
[1988,"chr5",20791591,20792078,"+",0,"NA","intron (NM_172992, intron 8 of 17)","L1_Rod|LINE|L1",90290,"NM_172992",68770,"Mm.86410","NM_172992","ENSMUSG00000039987","Phtf2","1110054G21Rik|9530062N20Rik|AI447096|C77923","putative homeodomain transcription factor 2","protein-coding"]
[1076,"chr16",25843990,25844371,"+",0,"NA","intron (NM_001127259, intron 4 of 13)","intron (NM_001127259, intron 4 of 13)",42264,"NM_001127264",22061,"Mm.20894","NM_011641","ENSMUSG00000022510","Trp63","AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1","transformation related protein 63","protein-coding"]
[766,"chr13",63246133,63247219,"+",0,"NA","intron (NM_001289924, intron 13 of 16)","intron (NM_001289924, intron 13 of 16)",6647,"NR_110521",72061,"Mm.188105","NM_028079","ENSMUSG00000021458","2010111I01Rik","2300006M17Rik|AP-O|Aopep|mir-23b|mir-24-1|mir-27b","RIKEN cDNA 2010111I01 gene","protein-coding"]
[449,"chr11",94352389,94352569,"+",0,"NA","intron (NM_029600, intron 26 of 30)","intron (NM_029600, intron 26 of 30)",24478,"NM_146024",71452,"Mm.141054","NM_027799","ENSMUSG00000020864","Ankrd40","1110011C06Rik|5530600A18Rik|Gcap15","ankyrin repeat domain 40","protein-coding"]
[1574,"chr2",110328761,110329789,"+",0,"NA","Intergenic","Intergenic",-23550,"NM_130452",170442,"Mm.27335","NM_130452",null,"Bbox1","AI874739","butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)","protein-coding"]
[1579,"chr2",112475669,112476676,"+",0,"NA","Intergenic","Intergenic",4645,"NM_205783",213788,"Mm.297624","NM_205783","ENSMUSG00000074939","Chrm5","AChR-M5|M5R|m5","cholinergic receptor, muscarinic 5","protein-coding"]
[659,"chr12",110556646,110556964,"+",0,"NA","intron (NM_012023, intron 8 of 13)","intron (NM_012023, intron 8 of 13)",-34569,"NR_033340",319786,"Mm.129691","NR_033340",null,"B930059L03Rik","-","RIKEN cDNA B930059L03 gene","ncRNA"]
[1141,"chr16",89861042,89862080,"+",0,"NA","intron (NM_001145886, intron 8 of 27)","intron (NM_001145886, intron 8 of 27)",-43209,"NM_001145887",21844,"Mm.310902","NM_009384","ENSMUSG00000002489","Tiam1","AI847750|D16Ium10|D16Ium10e","T cell lymphoma invasion and metastasis 1","protein-coding"]
[682,"chr13",6008945,6009570,"+",0,"NA","Intergenic","PB1D10|SINE|Alu",147768,"NM_011803",23849,"Mm.275036","NM_011803","ENSMUSG00000000078","Klf6","AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9","Kruppel-like factor 6","protein-coding"]
[353,"chr11",19835529,19836039,"+",0,"NA","Intergenic","Intergenic",-88658,"NM_033523",114716,"Mm.266627","NM_033523","ENSMUSG00000045671","Spred2","C79158","sprouty-related, EVH1 domain containing 2","protein-coding"]
[375,"chr11",48820133,48820965,"+",0,"NA","Intergenic","RMER6A|LTR|ERVK",-3158,"NM_145377",211007,"Mm.794","NM_145377","ENSMUSG00000040365","Trim41","AW552703|BC020156|R75223|RINCK","tripartite motif-containing 41","protein-coding"]
[984,"chr15",79765003,79765493,"+",0,"NA","intron (NM_017470, intron 1 of 3)","intron (NM_017470, intron 1 of 3)",9219,"NM_017470",54152,"Mm.288159","NM_017470","ENSMUSG00000022420","Dnal4","D15Ertd424e|Dnalc4","dynein, axonemal, light chain 4","protein-coding"]
[2409,"chr8",19147616,19147771,"+",0,"NA","Intergenic","Intergenic",6934,"NM_001286493",546038,"Mm.99206","NM_001034905","ENSMUSG00000059463","Spag11b","EG546038|Ep2c/h|Spag11c/h","sperm associated antigen 11B","protein-coding"]
[1155,"chr16",97760458,97760647,"+",0,"NA","intron (NM_023663, intron 1 of 7)","intron (NM_023663, intron 1 of 7)",3203,"NM_023663",72388,"Mm.35290","NM_023663","ENSMUSG00000005251","Ripk4","2310069J12Rik|AI552420|ANKK2|Ankrd3|DIk|PKK|RIP4","receptor-interacting serine-threonine kinase 4","protein-coding"]
[1485,"chr2",31162782,31163529,"+",0,"NA","intron (NM_178760, intron 1 of 17)","RSINE1|SINE|B4",10839,"NM_178760",277463,"Mm.236074","NM_178760",null,"Gpr107","9930033D15Rik|AI790205|C530034M11|mKIAA1624","G protein-coupled receptor 107","protein-coding"]
[788,"chr13",95378176,95378588,"+",0,"NA","Intergenic","Intergenic",-3025,"NM_025630",66549,"Mm.36785","NM_025630","ENSMUSG00000021681","Aggf1","2010009L17Rik|2310029P06Rik|AW112072|Peg3|VG5Q","angiogenic factor with G patch and FHA domains 1","protein-coding"]
[128,"chr1",135770438,135770865,"+",0,"NA","Intergenic","Intergenic",4566,"NM_013750",27280,"Mm.34346","NM_013750","ENSMUSG00000041801","Phlda3","Tih1","pleckstrin homology-like domain, family A, member 3","protein-coding"]
[501,"chr11",103893179,103895215,"+",0,"NA","intron (NM_008740, intron 8 of 20)","intron (NM_008740, intron 8 of 20)",59859,"NM_008740",18195,"Mm.260117","NM_008740","ENSMUSG00000034187","Nsf","AI316878|AU020090|AU067812|SKD2","N-ethylmaleimide sensitive fusion protein","protein-coding"]
[1313,"chr18",50051005,50051123,"+",0,"NA","intron (NM_001177759, intron 1 of 1)","intron (NM_001177759, intron 1 of 1)",-2218,"NM_134131",106869,"Mm.27740","NM_134131","ENSMUSG00000062210","Tnfaip8","AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2","tumor necrosis factor, alpha-induced protein 8","protein-coding"]
[278,"chr10",68355369,68355929,"+",0,"NA","Intergenic","Intergenic",-34507,"NR_045357",75148,"Mm.23505","NR_045357",null,"4930545H06Rik","-","RIKEN cDNA 4930545H06 gene","ncRNA"]
[1617,"chr2",148454879,148456044,"+",0,"NA","Intergenic","Intergenic",-11926,"NM_010740",17064,"Mm.681","NM_010740","ENSMUSG00000027435","Cd93","6030404G09Rik|AA145088|AA4.1|AW555904|C1qr1|C1qrp|Ly68","CD93 antigen","protein-coding"]
[490,"chr11",100411037,100412690,"+",0,"NA","exon (NM_176830, exon 5 of 8)","exon (NM_176830, exon 5 of 8)",2956,"NM_176830",66180,"Mm.4940","NM_176830","ENSMUSG00000006931","P3h4","1110036O03Rik|AI413214|Leprel4|Sc65","prolyl 3-hydroxylase family member 4 (non-enzymatic)","protein-coding"]
[2650,"chr9",78526564,78527942,"+",0,"NA","Intergenic","Intergenic",-45529,"NM_010106",13627,"Mm.138471","NM_010106","ENSMUSG00000037742","Eef1a1","-","eukaryotic translation elongation factor 1 alpha 1","protein-coding"]
[1843,"chr4",41066374,41066507,"+",0,"NA","Intergenic","Intergenic",-18304,"NM_007473",11832,"Mm.8728","NM_007473","ENSMUSG00000028427","Aqp7","AQP7L|AQPap","aquaporin 7","protein-coding"]
[155,"chr1",155075348,155075458,"+",0,"NA","Intergenic","Intergenic",24233,"NM_010500",15939,"Mm.12246","NM_010500","ENSMUSG00000056708","Ier5","-","immediate early response 5","protein-coding"]
[387,"chr11",55452508,55452913,"+",0,"NA","intron (NM_009720, intron 2 of 3)","intron (NM_009720, intron 2 of 3)",8428,"NM_009720",11927,"Mm.217759","NM_009720","ENSMUSG00000018585","Atox1","AI256639|Atx1","ATX1 (antioxidant protein 1) homolog 1 (yeast)","protein-coding"]
[2626,"chr9",70279609,70280180,"+",0,"NA","intron (NM_181072, intron 1 of 27)","intron (NM_181072, intron 1 of 27)",72544,"NM_181072",71602,"Mm.249311","NM_181072","ENSMUSG00000032220","Myo1e","2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3","myosin IE","protein-coding"]
[1913,"chr4",126165819,126167436,"+",0,"NA","intron (NM_146153, intron 10 of 10)","intron (NM_146153, intron 10 of 10)",-3286,"NM_001162533",66938,"Mm.29813","NM_025856","ENSMUSG00000073758","Sh3d21","1700029G01Rik|AU019788","SH3 domain containing 21","protein-coding"]
[1112,"chr16",56829359,56832423,"+",0,"NA","intron (NM_019631, intron 1 of 5)","intron (NM_019631, intron 1 of 5)",-35033,"NM_172825",239853,"Mm.258979","NM_172825","ENSMUSG00000022755","Adgrg7","9130020O16Rik|Gpr128","adhesion G protein-coupled receptor G7","protein-coding"]
[626,"chr12",80854265,80854376,"+",0,"NA","intron (NM_001242419, intron 3 of 6)","intron (NM_001242419, intron 3 of 6)",63788,"NM_001242419",217684,"Mm.341776","NM_178682","ENSMUSG00000021133","Susd6","4933426M11Rik|mKIAA0247","sushi domain containing 6","protein-coding"]
[1294,"chr18",35610928,35611108,"+",0,"NA","exon (NM_026420, exon 2 of 4)","exon (NM_026420, exon 2 of 4)",12351,"NM_026420",67869,"Mm.126534","NM_026420","ENSMUSG00000037058","Paip2","2310050K10Rik|AU045972","polyadenylate-binding protein-interacting protein 2","protein-coding"]
[461,"chr11",97301789,97306030,"+",0,"NA","Intergenic","Intergenic",-11807,"NM_025927",67036,"Mm.5381","NM_025927","ENSMUSG00000018882","Mrpl45","2600005P05Rik|AU043542|R75241","mitochondrial ribosomal protein L45","protein-coding"]
[2712,"chr9",120013851,120014096,"+",0,"NA","3' UTR (NM_011724, exon 3 of 3)","3' UTR (NM_011724, exon 3 of 3)",9625,"NM_011724",22437,"Mm.10117","NM_011724","ENSMUSG00000079243","Xirp1","AI415219|Cmya1","xin actin-binding repeat containing 1","protein-coding"]
[1562,"chr2",94178459,94178884,"+",0,"NA","Intergenic","Intergenic",-20762,"NM_019657",56348,"Mm.22505","NM_019657","ENSMUSG00000027195","Hsd17b12","2610510O05Rik|AI172963|KIK-I|Kik1","hydroxysteroid (17-beta) dehydrogenase 12","protein-coding"]
[1426,"chr19",47706820,47707816,"+",0,"NA","Intergenic","Intergenic",-15276,"NM_001290825",12821,"Mm.1225","NM_007732","ENSMUSG00000025064","Col17a1","BP180|Bpag|Bpag2","collagen, type XVII, alpha 1","protein-coding"]
[257,"chr10",45582149,45582279,"+",0,"NA","intron (NM_172473, intron 1 of 23)","B1_Mur2|SINE|Alu",4385,"NM_172473",209462,"Mm.458633","NM_172473","ENSMUSG00000038822","Hace1","1700042J16Rik|A730034A22Rik|BC025474","HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1","protein-coding"]
[1358,"chr19",5539148,5539865,"+",0,"NA","Intergenic","Intergenic",21069,"NM_019935",18426,"Mm.280225","NM_019935","ENSMUSG00000024922","Ovol1","BB147136|Ovo1|movo1","OVO homolog-like 1 (Drosophila)","protein-coding"]
[951,"chr15",57907082,57907593,"+",0,"NA","Intergenic","RMER17C|LTR|ERVK",-4862,"NM_001081396",210544,"Mm.390835","NM_199300","ENSMUSG00000022364","Tbc1d31","4B3|D330013L20Rik|Gm85|Wdr67","TBC1 domain family, member 31","protein-coding"]
[782,"chr13",81342062,81343064,"+",0,"NA","intron (NM_054053, intron 83 of 89)","intron (NM_054053, intron 83 of 89)",290581,"NM_054053",110789,"Mm.288694","NM_054053","ENSMUSG00000069170","Adgrv1","Frings|Gpr98|Mass1|Mgr1|VLGR1","adhesion G protein-coupled receptor V1","protein-coding"]
[85,"chr1",106799041,106799275,"+",0,"NA","Intergenic","Intergenic",-2433,"NM_009190",20479,"Mm.18705","NM_009190",null,"Vps4b","8030489C12Rik|Skd1","vacuolar protein sorting 4b (yeast)","protein-coding"]
[809,"chr13",112070631,112070811,"+",0,"NA","Intergenic","Intergenic",202785,"NR_130345",102636620,"Mm.402328","NR_130345","ENSMUSG00000086111","Gm15326","OTTMUSG00000020187","predicted gene 15326","ncRNA"]
[2200,"chr6",113032958,113034926,"+",0,"NA","Intergenic","Intergenic",-12385,"NM_008188",14911,"Mm.781","NM_008188","ENSMUSG00000030264","Thumpd3","AW556087|Gt(ROSA)26asSor|Gtrosa26as","THUMP domain containing 3","protein-coding"]
[1156,"chr16",97896911,97898272,"+",0,"NA","intron (NM_174847, intron 2 of 13)","intron (NM_174847, intron 2 of 13)",-20300,"NR_105929",102465581,null,"NR_105929","ENSMUSG00000105138","Mir6964","mmu-mir-6964","microRNA 6964","ncRNA"]
[2281,"chr7",28933638,28934260,"+",0,"NA","intron (NM_021895, intron 1 of 20)","intron (NM_021895, intron 1 of 20)",28331,"NM_021895",60595,"Mm.81144","NM_021895","ENSMUSG00000054808","Actn4","C77391","actinin alpha 4","protein-coding"]
[1557,"chr2",85534492,85534707,"+",0,"NA","Intergenic","Intergenic",-15664,"NM_001081664",228151,"Mm.17636","NM_001081664",null,"4833423E24Rik","Fads2p1|Gm113","RIKEN cDNA 4833423E24 gene","protein-coding"]
[1486,"chr2",31263491,31263605,"+",0,"NA","intron (NM_019681, intron 1 of 7)","intron (NM_019681, intron 1 of 7)",17625,"NM_019681",14299,"Mm.249318","NM_019681","ENSMUSG00000062661","Ncs1","9430075O15Rik|A730032G13Rik|AI836659|Freq|Mfreq|NCS-1","neuronal calcium sensor 1","protein-coding"]
[425,"chr11",76204663,76205324,"+",0,"NA","intron (NM_027773, intron 2 of 4)","intron (NM_027773, intron 2 of 4)",2937,"NM_027773",116972,"Mm.188413","NM_027773",null,"Fam57a","2310047D13Rik|4932415L08Rik|5430402E13Rik|5430420K21Rik|Wdt3","family with sequence similarity 57, member A","protein-coding"]
[2056,"chr5",103594796,103596344,"+",0,"NA","intron (NM_011204, intron 47 of 47)","intron (NM_011204, intron 47 of 47)",33833,"NM_029415",75750,"Mm.7446","NM_029415","ENSMUSG00000029321","Slc10a6","8430417G17Rik|C78479|Soat","solute carrier family 10 (sodium/bile acid cotransporter family), member 6","protein-coding"]
[736,"chr13",48515693,48516350,"+",0,"NA","Intergenic","Intergenic",-2585,"NM_001164576",67911,"Mm.251375","NM_026450","ENSMUSG00000050954","Zfp169","1700025J14Rik|4930429A13Rik|BE688704","zinc finger protein 169","protein-coding"]
[539,"chr12",8670258,8670669,"+",0,"NA","Intergenic","MER103C|DNA|hAT-Charlie",-3671,"NM_001160221",80913,"Mm.341243","NM_030723","ENSMUSG00000020594","Pum2","5730503J23Rik|Pumm2","pumilio RNA-binding family member 2","protein-coding"]
[781,"chr13",81311171,81313314,"+",0,"NA","intron (NM_054053, intron 83 of 89)","intron (NM_054053, intron 83 of 89)",320902,"NM_054053",110789,"Mm.288694","NM_054053","ENSMUSG00000069170","Adgrv1","Frings|Gpr98|Mass1|Mgr1|VLGR1","adhesion G protein-coupled receptor V1","protein-coding"]
[1950,"chr4",138042719,138042885,"+",0,"NA","intron (NM_172703, intron 2 of 34)","PB1D7|SINE|Alu",49346,"NM_172703",230861,"Mm.268903","NM_172703","ENSMUSG00000028760","Eif4g3","1500002J22Rik|4833436O05|4930523M17Rik|G1-419-52|eIF4GII|repro8","eukaryotic translation initiation factor 4 gamma, 3","protein-coding"]
[1698,"chr3",60052935,60054971,"+",0,"NA","Intergenic","RMER15|LTR|ERVL",22165,"NM_023383",67758,"Mm.24547","NM_023383","ENSMUSG00000027761","Aadac","5033417E09Rik|AI265437|Aada","arylacetamide deacetylase (esterase)","protein-coding"]
[520,"chr11",116632641,116633601,"+",0,"NA","Intergenic","MER45B|DNA|hAT-Tip100",-6102,"NM_172572",217344,"Mm.89695","NM_172572","ENSMUSG00000020806","Rhbdf2","4732465I17Rik|Rhbdl6|cub","rhomboid 5 homolog 2 (Drosophila)","protein-coding"]
[2037,"chr5",72854567,72855677,"+",0,"NA","intron (NM_013689, intron 1 of 17)","intron (NM_013689, intron 1 of 17)",13326,"NM_001113461",21682,"Mm.319581","NM_013689","ENSMUSG00000029217","Tec","-","tec protein tyrosine kinase","protein-coding"]
[532,"chr11",121543219,121543629,"+",0,"NA","intron (NM_029878, intron 14 of 38)","intron (NM_029878, intron 14 of 38)",-24082,"NM_178763",319530,"Mm.11395","NM_178763","ENSMUSG00000039238","Zfp750","A030007D23Rik|Znf750","zinc finger protein 750","protein-coding"]
[1193,"chr17",29375758,29375962,"+",0,"NA","intron (NM_013710, intron 13 of 15)","B3A|SINE|B2",14946,"NM_001159538",26382,"Mm.279187","NM_013710","ENSMUSG00000024013","Fgd2","Tcd-2|Tcd2|ZFYVE4|tcs-2|tcs2","FYVE, RhoGEF and PH domain containing 2","protein-coding"]
[2455,"chr8",79348524,79348663,"+",0,"NA","intron (NM_008539, intron 5 of 6)","intron (NM_008539, intron 5 of 6)",50875,"NM_008539",17125,"Mm.223717","NM_008539","ENSMUSG00000031681","Smad1","AI528653|Madh1|Madr1|Mlp1|MusMLP","SMAD family member 1","protein-coding"]
[55,"chr1",74726057,74726502,"+",0,"NA","intron (NM_024264, intron 1 of 8)","intron (NM_024264, intron 1 of 8)",12744,"NM_024264",104086,"Mm.85083","NM_024264","ENSMUSG00000026170","Cyp27a1","1300013A03Rik|Cyp27","cytochrome P450, family 27, subfamily a, polypeptide 1","protein-coding"]
[1890,"chr4",108278308,108278457,"+",0,"NA","intron (NM_001033634, intron 1 of 13)","intron (NM_001033634, intron 1 of 13)",22708,"NM_001033634",414872,"Mm.426241","NM_001033634","ENSMUSG00000034636","Zyg11b","1110046I03Rik|2810482G21Rik|D4Mgi23|Gm431|mKIAA1730","zyg-ll family member B, cell cycle regulator","protein-coding"]
[1681,"chr3",41194100,41195290,"+",0,"NA","Intergenic","Intergenic",-111649,"NM_027558",70804,"Mm.40321","NM_027558","ENSMUSG00000049940","Pgrmc2","4631434O19Rik|5730409G06Rik|DG6|PMBP","progesterone receptor membrane component 2","protein-coding"]
[57,"chr1",74805011,74805326,"+",0,"NA","TTS (NM_009518)","TTS (NM_009518)",13149,"NM_009518",22409,"Mm.5130","NM_009518",null,"Wnt10a","-","wingless-type MMTV integration site family, member 10A","protein-coding"]
[2642,"chr9",77530666,77530922,"+",0,"NA","intron (NM_001146048, intron 1 of 13)","MTD|LTR|ERVL-MaLR",13265,"NM_172528",214345,"Mm.28534","NM_172528","ENSMUSG00000032352","Lrrc1","A430093J20Rik|AU016091|D030059I21|mKIAA4018","leucine rich repeat containing 1","protein-coding"]
[872,"chr14",73486361,73486897,"+",0,"NA","Intergenic","Intergenic",-23420,"NM_026119",67381,"Mm.282888","NM_026119","ENSMUSG00000022109","Med4","2410046H15Rik|DRIP36|HSPC126|TRAP36|Vdirp|Vdrip","mediator complex subunit 4","protein-coding"]
[2354,"chr7",107685465,107686052,"+",0,"NA","intron (NM_001163557, intron 4 of 25)","intron (NM_001163557, intron 4 of 25)",72274,"NM_001205227",320635,"Mm.132828","NM_177216","ENSMUSG00000048065","Cyb5r2","D630003K02Rik|b5R.2","cytochrome b5 reductase 2","protein-coding"]
[1146,"chr16",95674103,95676186,"+",0,"NA","Intergenic","(GGGAA)n|Simple_repeat|Simple_repeat",-27263,"NM_011809",23872,"Mm.290207","NM_011809","ENSMUSG00000022895","Ets2","AU022856|Ets-2","E26 avian leukemia oncogene 2, 3' domain","protein-coding"]
[395,"chr11",61199147,61199471,"+",0,"NA","Intergenic","Intergenic",-9433,"NM_007436",11670,"Mm.4257","NM_007436","ENSMUSG00000019102","Aldh3a1","Ahd-4|Ahd4|Aldh|Aldh3","aldehyde dehydrogenase family 3, subfamily A1","protein-coding"]
[89,"chr1",106863640,106866721,"+",0,"NA","intron (NM_009257, intron 1 of 6)","Lx10|LINE|L1",4000,"NM_009257",20724,"Mm.268618","NM_009257","ENSMUSG00000067006","Serpinb5","1110036M19Rik|AI462524|AI646751|Maspin|PI-5|Spi7|ovalbumin","serine (or cysteine) peptidase inhibitor, clade B, member 5","protein-coding"]
[175,"chr1",171477880,171478682,"+",0,"NA","Intergenic","Intergenic",-25197,"NM_019484",56009,"Mm.389208","NM_019484","ENSMUSG00000060244","Alyref2","C130042O11Rik|REF2|Refbp2","Aly/REF export factor 2","protein-coding"]
[584,"chr12",70554158,70555503,"+",0,"NA","intron (NR_037248, intron 2 of 4)","intron (NR_037248, intron 2 of 4)",101676,"NM_028339",72736,"Mm.204670","NM_028339","ENSMUSG00000021072","Tmx1","2810425A04Rik|AI465319|Txndc1","thioredoxin-related transmembrane protein 1","protein-coding"]
[988,"chr15",80702306,80702873,"+",0,"NA","Intergenic","Intergenic",-4979,"NR_045310",106059,"Mm.442457","NR_045309",null,"A430088P11Rik","-","RIKEN cDNA A430088P11 gene","ncRNA"]
[35,"chr1",58857243,58857456,"+",0,"NA","Intergenic","B1_Mur3|SINE|Alu",54847,"NM_001080126",12370,"Mm.336851","NM_009812","ENSMUSG00000026029","Casp8","CASP-8|FLICE|MACH|Mch5","caspase 8","protein-coding"]
[2453,"chr8",79150916,79151029,"+",0,"NA","intron (NM_001294279, intron 8 of 14)","intron (NM_001294279, intron 8 of 14)",97611,"NM_026315",67687,"Mm.178707","NM_026315","ENSMUSG00000031682","1700011L22Rik","-","RIKEN cDNA 1700011L22 gene","protein-coding"]
[2295,"chr7",45038253,45038812,"+",0,"NA","intron (NM_175022, intron 6 of 13)","intron (NM_175022, intron 6 of 13)",14349,"NM_175022",233210,"Mm.219137","NM_175022","ENSMUSG00000046574","Prr12","6720469B10|BC058674","proline rich 12","protein-coding"]
[1882,"chr4",95396560,95396947,"+",0,"NA","Intergenic","Intergenic",-160754,"NM_001113412",75578,"Mm.276098","NM_029347","ENSMUSG00000028573","Fggy","2310009E04Rik","FGGY carbohydrate kinase domain containing","protein-coding"]
[1550,"chr2",84626074,84627929,"+",0,"NA","intron (NM_007615, intron 1 of 19)","ID_B1|SINE|B4",23509,"NM_001085453",12388,"Mm.35738","NM_007615","ENSMUSG00000034101","Ctnnd1","AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384","catenin (cadherin associated protein), delta 1","protein-coding"]
[1454,"chr2",19300049,19300727,"+",0,"NA","intron (NM_001081083, intron 17 of 19)","intron (NM_001081083, intron 17 of 19)",-43929,"NR_126563",108871,"Mm.107666","NR_126563",null,"4930447M23Rik","-","RIKEN cDNA 4930447M23 gene","ncRNA"]
[1421,"chr19",47331055,47331635,"+",0,"NA","intron (NM_008018, intron 6 of 14)","intron (NM_008018, intron 6 of 14)",-57756,"NR_105961",102466782,null,"NR_105961","ENSMUSG00000098786","Mir6995","Gm27576|mmu-mir-6995","microRNA 6995","ncRNA"]
[665,"chr12",112880505,112880802,"+",0,"NA","Intergenic","Intergenic",-19737,"NM_019925",56696,"Mm.20455","NM_019925","ENSMUSG00000021298","Gpr132","G2a","G protein-coupled receptor 132","protein-coding"]
[1476,"chr2",27539979,27540162,"+",0,"NA","Intergenic","Intergenic",24923,"NM_080848",140858,"Mm.28265","NM_080848","ENSMUSG00000026917","Wdr5","2410008O07Rik|AA408785|AA960360|Big|Big-3","WD repeat domain 5","protein-coding"]
[2533,"chr8",126616304,126616417,"+",0,"NA","Intergenic","Intergenic",-22924,"NM_001164598",270110,"Mm.334918","NM_001164598","ENSMUSG00000051495","Irf2bp2","E130305N23Rik|IRF-2BP2","interferon regulatory factor 2 binding protein 2","protein-coding"]
[1207,"chr17",35812747,35813259,"+",0,"NA","Intergenic","Intergenic",-8710,"NM_133662",15937,"Mm.25613","NM_133662","ENSMUSG00000003541","Ier3","AI663993|IEX-1|cI-3|gly96","immediate early response 3","protein-coding"]
[2641,"chr9",77425652,77428567,"+",0,"NA","Intergenic","Intergenic",-27693,"NR_040378",70487,"Mm.58958","NR_040378","ENSMUSG00000099170","5730403I07Rik","-","RIKEN cDNA 5730403I07 gene","ncRNA"]
[2670,"chr9",98492406,98493238,"+",0,"NA","intron (NM_009034, intron 1 of 3)","intron (NM_009034, intron 1 of 3)",2285,"NM_009034",19660,"Mm.12825","NM_009034","ENSMUSG00000032454","Rbp2","Crbp-2|CrbpII|Rbp-2","retinol binding protein 2, cellular","protein-coding"]
[1584,"chr2",127137568,127138521,"+",0,"NA","TTS (NM_001163528)","TTS (NM_001163528)",-4090,"NM_144818",215387,"Mm.29786","NM_144818","ENSMUSG00000034906","Ncaph","A730011O11Rik|Brrn1|HCAP-H|mKIAA0074","non-SMC condensin I complex, subunit H","protein-coding"]
[904,"chr14",118502507,118502633,"+",0,"NA","intron (NM_001163675, intron 27 of 30)","intron (NM_001163675, intron 27 of 30)",89902,"NR_105815",102465208,null,"NR_105815","ENSMUSG00000098433","Mir6391","Gm27914|mmu-mir-6391","microRNA 6391","ncRNA"]
[930,"chr15",36842128,36842316,"+",0,"NA","Intergenic","Intergenic",-45293,"NM_001253806",22631,"Mm.3360","NM_011740","ENSMUSG00000022285","Ywhaz","1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854","tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide","protein-coding"]
[1675,"chr3",30998931,31000893,"+",0,"NA","intron (NM_008857, intron 1 of 17)","intron (NM_008857, intron 1 of 17)",4141,"NM_008857",18759,"Mm.291554","NM_008857","ENSMUSG00000037643","Prkci","2310021H13Rik|AI427505|PKClambda|Pkci|Pkcl|Prkcl|aPKClambda|mKIAA4165","protein kinase C, iota","protein-coding"]
[649,"chr12",99394198,99394631,"+",0,"NA","intron (NM_183186, intron 1 of 5)","intron (NM_183186, intron 1 of 5)",55660,"NM_183186",71375,"Mm.341972","NM_183186","ENSMUSG00000033713","Foxn3","5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1","forkhead box N3","protein-coding"]
[2150,"chr6",51172540,51174168,"+",0,"NA","Intergenic","Intergenic",96556,"NR_029719",387166,null,"NR_029719","ENSMUSG00000065505","Mir148a","Mirn148|Mirn148a|mir-148a","microRNA 148a","ncRNA"]
[1318,"chr18",61223423,61224785,"+",0,"NA","intron (NM_146086, intron 1 of 21)","intron (NM_146086, intron 1 of 21)",3605,"NM_146086",225600,"Mm.391106","NM_146086","ENSMUSG00000024575","Pde6a","Pdea|nmf282","phosphodiesterase 6A, cGMP-specific, rod, alpha","protein-coding"]
[648,"chr12",99385432,99386632,"+",0,"NA","intron (NM_183186, intron 2 of 5)","intron (NM_183186, intron 2 of 5)",64042,"NM_183186",71375,"Mm.341972","NM_183186","ENSMUSG00000033713","Foxn3","5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1","forkhead box N3","protein-coding"]
[642,"chr12",86950261,86950572,"+",0,"NA","intron (NM_001289432, intron 1 of 4)","intron (NM_001289432, intron 1 of 4)",3073,"NM_001289432",217732,"Mm.22337","NM_173735","ENSMUSG00000034157","Cipc","2310044G17Rik|AI842544|AI853744|Kiaa1737|mKIAA1737","CLOCK interacting protein, circadian","protein-coding"]
[2006,"chr5",43023532,43023739,"+",0,"NA","Intergenic","Intergenic",-209828,"NM_175937",231207,"Mm.7233","NM_175937","ENSMUSG00000039782","Cpeb2","A630055H10Rik|Cpe-bp2","cytoplasmic polyadenylation element binding protein 2","protein-coding"]
[2245,"chr6",136541131,136541710,"+",0,"NA","intron (NM_019426, intron 1 of 14)","ORR1C2-int|LTR|ERVL-MaLR",22569,"NM_019426",54343,"Mm.173271","NM_019426","ENSMUSG00000030213","Atf7ip","2610204M12Rik|AM|Mcaf1","activating transcription factor 7 interacting protein","protein-coding"]
[1764,"chr3",102159090,102159584,"+",0,"NA","intron (NM_177545, intron 7 of 7)","L2c|LINE|L2",45356,"NM_177545",229658,"Mm.118004","NM_177545",null,"Vangl1","Kitenin|Lpp2|Stb2|Stbm","vang-like 1 (van gogh, Drosophila)","protein-coding"]
[2130,"chr6",29546989,29548774,"+",0,"NA","intron (NM_177296, intron 21 of 22)","intron (NM_177296, intron 21 of 22)",18599,"NM_001252382",27056,"Mm.6479","NM_012057","ENSMUSG00000029771","Irf5","AW491843|mirf5","interferon regulatory factor 5","protein-coding"]
[1908,"chr4",123588124,123588790,"+",0,"NA","intron (NM_001199137, intron 1 of 92)","intron (NM_001199137, intron 1 of 92)",-27963,"NR_105824",102465214,null,"NR_105824","ENSMUSG00000099005","Mir6398","Gm27657|mmu-mir-6398","microRNA 6398","ncRNA"]
[1028,"chr15",101162099,101162254,"+",0,"NA","Intergenic","Intergenic",-11949,"NM_007395",11479,"Mm.308467","NM_007395",null,"Acvr1b","6820432J04|ActR-IB|ActRIB|Acvrlk4|Alk4|SKR2","activin A receptor, type 1B","protein-coding"]
[1589,"chr2",131203401,131204332,"+",0,"NA","intron (NR_037281, intron 2 of 2)","(CA)n|Simple_repeat|Simple_repeat",-6494,"NM_001291032",69596,"Mm.2937","NM_027129","ENSMUSG00000068264","Ap5s1","0610038L13Rik|2310035K24Rik|AW060727|sigma5","adaptor-related protein 5 complex, sigma 1 subunit","protein-coding"]
[198,"chr1",189368302,189368589,"+",0,"NA","intron (NM_001281848, intron 1 of 5)","B4|SINE|B4",-24253,"NM_001281847",16526,"Mm.33304","NM_010607","ENSMUSG00000037624","Kcnk2","A430027H14Rik|AI848635|TREK-1","potassium channel, subfamily K, member 2","protein-coding"]
[2550,"chr9",21728108,21729113,"+",0,"NA","intron (NM_001252659, intron 1 of 17)","intron (NM_001252659, intron 1 of 17)",5034,"NM_010700",16835,"Mm.3213","NM_010700","ENSMUSG00000032193","Ldlr","Hlb301","low density lipoprotein receptor","protein-coding"]
[1718,"chr3",88137732,88140179,"+",0,"NA","Intergenic","Intergenic",-3417,"NM_001310587",17261,"Mm.28184","NM_133665","ENSMUSG00000001419","Mef2d","C80750","myocyte enhancer factor 2D","protein-coding"]
[1098,"chr16",32858477,32859738,"+",0,"NA","intron (NM_001200038, intron 1 of 19)","B1F|SINE|Alu",9259,"NM_001200038",100502698,"Mm.327319","NM_172615","ENSMUSG00000035629","Rubcn","1700021K19Rik|5330403K09|Kiaa0226|Rubicon|mKIAA0226","RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein","protein-coding"]
[1059,"chr16",22387430,22387563,"+",0,"NA","intron (NM_023794, intron 11 of 12)","intron (NM_023794, intron 11 of 12)",52074,"NM_023794",104156,"Mm.155708","NM_023794","ENSMUSG00000013089","Etv5","1110005E01Rik|8430401F14Rik|ERM","ets variant 5","protein-coding"]
[2683,"chr9",103081312,103081624,"+",0,"NA","intron (NM_033314, intron 11 of 13)","intron (NM_033314, intron 11 of 13)",-30606,"NM_173781",270192,"Mm.490252","NM_173781","ENSMUSG00000032549","Rab6b","9630015C03|AI844641|C330006L04Rik|D9Bwg0185e","RAB6B, member RAS oncogene family","protein-coding"]
[913,"chr14",120322440,120324188,"+",0,"NA","intron (NM_175341, intron 1 of 8)","intron (NM_175341, intron 1 of 8)",47645,"NM_175341",105559,"Mm.238266","NM_175341","ENSMUSG00000022139","Mbnl2","1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072","muscleblind-like 2","protein-coding"]
[2019,"chr5",57816496,57816657,"+",0,"NA","intron (NM_001310608, intron 1 of 3)","intron (NM_001310608, intron 1 of 3)",98495,"NM_018764",54216,"Mm.332387","NM_018764","ENSMUSG00000029108","Pcdh7","-","protocadherin 7","protein-coding"]
[2665,"chr9",90069862,90070967,"+",0,"NA","intron (NM_001312649, intron 8 of 10)","intron (NM_001312649, intron 8 of 10)",16147,"NM_001312649",13036,"Mm.2277","NM_007801","ENSMUSG00000032359","Ctsh","AL022844","cathepsin H","protein-coding"]
[202,"chr1",191802386,191803046,"+",0,"NA","Intergenic","Intergenic",-18757,"NM_010892",18005,"Mm.33773","NM_010892","ENSMUSG00000026622","Nek2","AA617254|C77054","NIMA (never in mitosis gene a)-related expressed kinase 2","protein-coding"]
[361,"chr11",23712089,23713117,"+",0,"NA","intron (NM_028956, intron 11 of 17)","intron (NM_028956, intron 11 of 17)",46627,"NM_028304",74467,"Mm.29536","NM_028304","ENSMUSG00000020280","Pus10","2810013G11Rik|4933435A13Rik|AU014648|C77560|Ccdc139","pseudouridylate synthase 10","protein-coding"]
[2468,"chr8",86730380,86730925,"+",0,"NA","intron (NM_009172, intron 1 of 1)","intron (NM_009172, intron 1 of 1)",-15047,"NR_027829",666945,"Mm.391806","NR_027829",null,"Gm10638","ENSMUSG00000074178","predicted gene 10638","ncRNA"]
[184,"chr1",180384989,180385981,"+",0,"NA","intron (NM_001081175, intron 2 of 7)","MER5B|DNA|hAT-Charlie",-54936,"NR_003623",277333,"Mm.389223","NM_199472",null,"Gm5069","EG277333","glyceraldehyde-3-phosphate dehydrogenase pseudogene","pseudo"]
[776,"chr13",75754007,75754300,"+",0,"NA","intron (NM_138953, intron 4 of 11)","intron (NM_138953, intron 4 of 11)",46669,"NM_138953",192657,"Mm.21288","NM_138953","ENSMUSG00000001542","Ell2","-","elongation factor RNA polymerase II 2","protein-coding"]
[2183,"chr6",93757754,93757882,"+",0,"NA","intron (NM_001029850, intron 8 of 23)","intron (NM_001029850, intron 8 of 23)",155145,"NR_104594",14924,"Mm.217216","NM_010367","ENSMUSG00000045095","Magi1","AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129","membrane associated guanylate kinase, WW and PDZ domain containing 1","protein-coding"]
[1819,"chr4",8905904,8906297,"+",0,"NA","Intergenic","Intergenic",215694,"NM_001277149",320790,"Mm.138792","NM_001033395","ENSMUSG00000041235","Chd7","A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis","chromodomain helicase DNA binding protein 7","protein-coding"]
[1459,"chr2",20752903,20753013,"+",0,"NA","intron (NM_178059, intron 7 of 18)","B1_Mur4|SINE|Alu",214763,"NM_001081364",71435,"Mm.28507","NM_001081364","ENSMUSG00000036591","Arhgap21","5530401C11Rik|AA416458|ARHGAP10","Rho GTPase activating protein 21","protein-coding"]
[1570,"chr2",103459379,103459511,"+",0,"NA","intron (NM_009804, intron 10 of 12)","intron (NM_009804, intron 10 of 12)",25708,"NM_009804",12359,"Mm.4215","NM_009804","ENSMUSG00000027187","Cat","2210418N07|Cas-1|Cas1|Cs-1","catalase","protein-coding"]
[2673,"chr9",99145127,99147203,"+",0,"NA","Intergenic","RSINE1|SINE|B4",-5954,"NM_029094",74769,"Mm.213128","NM_029094",null,"Pik3cb","1110001J02Rik|AI447572|p110beta","phosphatidylinositol 3-kinase, catalytic, beta polypeptide","protein-coding"]
[1984,"chr5",12242263,12242373,"+",0,"NA","Intergenic","Intergenic",-140848,"NM_028882",108151,"Mm.89313","NM_028882","ENSMUSG00000040254","Sema3d","4631426B19Rik","sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D","protein-coding"]
[1269,"chr18",5016201,5016527,"+",0,"NA","Intergenic","ORR1A4|LTR|ERVL-MaLR",-30225,"NM_153153",225115,"Mm.136791","NM_153153","ENSMUSG00000024236","Svil","AU024053|B430302E16Rik","supervillin","protein-coding"]
[181,"chr1",179570792,179571138,"+",0,"NA","intron (NM_146105, intron 1 of 10)","intron (NM_146105, intron 1 of 10)",24436,"NM_146105",226744,"Mm.87662","NM_146105","ENSMUSG00000038949","Cnst","9630058J23Rik","consortin, connexin sorting protein","protein-coding"]
[412,"chr11",69095296,69096184,"+",0,"NA","Intergenic","Intergenic",-3216,"NM_011065",18626,"Mm.7373","NM_011065","ENSMUSG00000020893","Per1","Per|m-rigui|mPer1","period circadian clock 1","protein-coding"]
[307,"chr10",95508731,95509577,"+",0,"NA","Intergenic","IMPB_01|Satellite|Satellite",-6008,"NM_080560",93765,"Mm.371667","NM_080560","ENSMUSG00000074781","Ube2n","1500026J17Rik|AL022654|BB101821|UBC13","ubiquitin-conjugating enzyme E2N","protein-coding"]
[1671,"chr3",21671063,21672292,"+",0,"NA","Intergenic","Intergenic",-404975,"NM_030732",81004,"Mm.202966","NM_030732","ENSMUSG00000027630","Tbl1xr1","8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1","transducin (beta)-like 1X-linked receptor 1","protein-coding"]
[2041,"chr5",77155392,77155593,"+",0,"NA","Intergenic","MIRb|SINE|MIR",-40369,"NM_175606",74318,"Mm.181852","NM_175606","ENSMUSG00000059325","Hopx","1110018K11Rik|1200015P04Rik|2300002F06Rik|AI848177|AW490897|Cameo|Hdop|Hod|Hop|Ob1|Obl|Toto","HOP homeobox","protein-coding"]
[1467,"chr2",25163438,25163680,"+",0,"NA","Intergenic","MER121|DNA|TcMar?",-17199,"NM_025980",67122,"Mm.46539","NM_025980","ENSMUSG00000078202","Nrarp","2700054M22Rik","Notch-regulated ankyrin repeat protein","protein-coding"]
[1463,"chr2",23034764,23035778,"+",0,"NA","intron (NM_001077190, intron 1 of 10)","intron (NM_001077190, intron 1 of 10)",4970,"NM_001077192",11308,"Mm.205647","NM_007380","ENSMUSG00000058835","Abi1","E3B1|NAP1|Ssh3bp1|abi-1","abl-interactor 1","protein-coding"]
[830,"chr14",21553284,21553471,"+",0,"NA","intron (NM_001205241, intron 2 of 16)","intron (NM_001205241, intron 2 of 16)",53592,"NM_017479",54169,"Mm.248967","NM_017479","ENSMUSG00000021767","Kat6b","AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf","K(lysine) acetyltransferase 6B","protein-coding"]
[154,"chr1",155074421,155074819,"+",0,"NA","Intergenic","Intergenic",25016,"NM_010500",15939,"Mm.12246","NM_010500","ENSMUSG00000056708","Ier5","-","immediate early response 5","protein-coding"]
[2062,"chr5",114686696,114687616,"+",0,"NA","intron (NM_019821, intron 1 of 4)","intron (NM_019821, intron 1 of 4)",3779,"NM_019821",56356,"Mm.275766","NM_019821","ENSMUSG00000011884","Gltp","1110001F24Rik|C76925|C77564","glycolipid transfer protein","protein-coding"]
[1101,"chr16",44131729,44133785,"+",0,"NA","intron (NM_007508, intron 1 of 14)","intron (NM_007508, intron 1 of 14)",6262,"NM_007508",11964,"Mm.217787","NM_007508","ENSMUSG00000052459","Atp6v1a","AI647066|Atp6a1|Atp6a2|Atp6v1a1|VA68|VPP2","ATPase, H+ transporting, lysosomal V1 subunit A","protein-coding"]
[704,"chr13",37847314,37847669,"+",0,"NA","intron (NM_001039188, intron 1 of 9)","intron (NM_001039188, intron 1 of 9)",20098,"NM_001039188",68750,"Mm.491109","NM_026830","ENSMUSG00000039087","Rreb1","1110037N09Rik|AA414966|B930013M22Rik","ras responsive element binding protein 1","protein-coding"]
[326,"chr10",115331908,115334069,"+",0,"NA","Intergenic","Intergenic",-17397,"NM_024454",216344,"Mm.21936","NM_024454","ENSMUSG00000020132","Rab21","9630024B22","RAB21, member RAS oncogene family","protein-coding"]
[1462,"chr2",23006665,23007356,"+",0,"NA","intron (NM_001077190, intron 1 of 10)","intron (NM_001077190, intron 1 of 10)",33231,"NM_001077192",11308,"Mm.205647","NM_007380","ENSMUSG00000058835","Abi1","E3B1|NAP1|Ssh3bp1|abi-1","abl-interactor 1","protein-coding"]
[1165,"chr17",13714008,13714678,"+",0,"NA","Intergenic","Intergenic",-46198,"NM_010806",17356,"Mm.59167","NM_010806","ENSMUSG00000068036","Mllt4","5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|S-afadin","myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4","protein-coding"]
[2543,"chr9",14626702,14627264,"+",0,"NA","Intergenic","Intergenic",-11983,"NM_001081395",75723,"Mm.159552","NM_001081395","ENSMUSG00000013076","Amotl1","2310010G08Rik|2310067L22Rik|4932416D09Rik|JEAP|mFLJ00155","angiomotin-like 1","protein-coding"]
[681,"chr13",5887197,5888388,"+",0,"NA","Intergenic","Intergenic",26303,"NM_011803",23849,"Mm.275036","NM_011803","ENSMUSG00000000078","Klf6","AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9","Kruppel-like factor 6","protein-coding"]
[335,"chr10",117342843,117343174,"+",0,"NA","Intergenic","Intergenic",33965,"NM_001013391",432508,"Mm.478881","NM_001013391","ENSMUSG00000055531","Cpsf6","4733401N12Rik|AI256641|CFIM|CFIM68|HPBRII-4|HPBRII-7","cleavage and polyadenylation specific factor 6","protein-coding"]
[1029,"chr15",101178260,101179014,"+",0,"NA","intron (NM_007395, intron 1 of 8)","intron (NM_007395, intron 1 of 8)",4512,"NM_007395",11479,"Mm.308467","NM_007395",null,"Acvr1b","6820432J04|ActR-IB|ActRIB|Acvrlk4|Alk4|SKR2","activin A receptor, type 1B","protein-coding"]
[2715,"chr9",120776955,120777269,"+",0,"NA","Intergenic","Intergenic",138138,"NR_040742",76402,"Mm.436588","NR_040742","ENSMUSG00000100146","1700020M21Rik","-","RIKEN cDNA 1700020M21 gene","ncRNA"]
[5,"chr1",24101786,24103286,"+",0,"NA","Intergenic","Intergenic",-2195,"NM_026604",68187,"Mm.87130","NM_026604","ENSMUSG00000026153","Fam135a","4921533L14Rik|AI256732|AI835491","family with sequence similarity 135, member A","protein-coding"]
[2694,"chr9",107889861,107890426,"+",0,"NA","intron (NM_028369, intron 1 of 5)","intron (NM_028369, intron 1 of 5)",2014,"NM_028369",72825,"Mm.38037","NM_028369","ENSMUSG00000032583","Mon1a","2810468K17Rik","MON1 homolog A (yeast)","protein-coding"]
[2105,"chr5",145223260,145223970,"+",0,"NA","Intergenic","Intergenic",-8100,"NM_001083958",72611,"Mm.206555","NM_028298","ENSMUSG00000007812","Zfp655","2700038I16Rik|9030409O18Rik|mKIAA4222","zinc finger protein 655","protein-coding"]
[1957,"chr4",141454923,141455771,"+",0,"NA","intron (NM_009541, intron 2 of 15)","intron (NM_009541, intron 2 of 15)",10674,"NM_009541",22642,"Mm.389590","NM_009541","ENSMUSG00000006215","Zbtb17","AA589413|Lp-1|Miz1|Zfp100|mZ13","zinc finger and BTB domain containing 17","protein-coding"]
[554,"chr12",35671592,35673103,"+",0,"NA","TTS (NR_045051)","TTS (NR_045051)",13957,"NR_045051",71581,"Mm.100110","NR_045050",null,"9130015A21Rik","-","RIKEN cDNA 9130015A21 gene","ncRNA"]
[2657,"chr9",83750039,83751638,"+",0,"NA","Intergenic","Intergenic",55467,"NM_148941",83603,"Mm.83949","NM_148941","ENSMUSG00000032262","Elovl4","-","elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4","protein-coding"]
[552,"chr12",24599602,24600237,"+",0,"NA","intron (NM_145890, intron 6 of 13)","intron (NM_145890, intron 6 of 13)",19200,"NM_145890",195733,"Mm.263068","NM_145890","ENSMUSG00000020656","Grhl1","LBP-32|MGR|Tcfcp2l2","grainyhead-like 1 (Drosophila)","protein-coding"]
[1867,"chr4",59223383,59223615,"+",0,"NA","TTS (NM_011673)","TTS (NM_011673)",33949,"NM_011673",22234,"Mm.198803","NM_011673","ENSMUSG00000028381","Ugcg","AU043821|C80537|Epcs21|GlcT-1|Ugcgl","UDP-glucose ceramide glucosyltransferase","protein-coding"]
[1623,"chr2",151961555,151962369,"+",0,"NA","Intergenic","Intergenic",5655,"NR_035478",100316704,null,"NR_035478","ENSMUSG00000088491","Mir1953","mir-1953|mmu-mir-1953","microRNA 1953","ncRNA"]
[2505,"chr8",110941019,110941990,"+",0,"NA","intron (NM_009179, intron 1 of 6)","intron (NM_009179, intron 1 of 6)",21639,"NM_009179",20444,"Mm.200388","NM_009179","ENSMUSG00000031749","St3gal2","AI429591|AW822065|ST3GalII|Siat5","ST3 beta-galactoside alpha-2,3-sialyltransferase 2","protein-coding"]
[74,"chr1",86482688,86483292,"+",0,"NA","Intergenic","Intergenic",-43746,"NM_008972",19231,"Mm.19187","NM_008972","ENSMUSG00000026238","Ptma","Thym","prothymosin alpha","protein-coding"]
[890,"chr14",99898200,99898835,"+",0,"NA","intron (NM_010636, intron 6 of 6)","Lx8|LINE|L1",251279,"NM_010636",16597,"Mm.396499","NM_010636",null,"Klf12","2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik","Kruppel-like factor 12","protein-coding"]
[440,"chr11",87594893,87595263,"+",0,"NA","intron (NM_133215, intron 2 of 18)","intron (NM_133215, intron 2 of 18)",2861,"NM_133215",170749,"Mm.399376","NM_133215","ENSMUSG00000018401","Mtmr4","AA596759|ESTM44|FYVE-DSP2|ZFYVE11|mKIAA0647","myotubularin related protein 4","protein-coding"]
[1926,"chr4",129792564,129793905,"+",0,"NA","Intergenic","PB1D7|SINE|Alu",-27245,"NM_008974",19244,"Mm.193688","NM_008974","ENSMUSG00000028788","Ptp4a2","Prl-2","protein tyrosine phosphatase 4a2","protein-coding"]
[1289,"chr18",24193705,24194132,"+",0,"NA","Intergenic","RMER1B|Other|Other",-11426,"NM_013814",14423,"Mm.30249","NM_013814","ENSMUSG00000000420","Galnt1","-","UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1","protein-coding"]
[299,"chr10",85160725,85163307,"+",0,"NA","intron (NM_007771, intron 1 of 12)","intron (NM_007771, intron 1 of 12)",23038,"NM_007771",12952,"Mm.26237","NM_007771","ENSMUSG00000020038","Cry1","AU020726|AU021000|Phll1","cryptochrome 1 (photolyase-like)","protein-coding"]
[2024,"chr5",64439191,64439456,"+",0,"NA","Intergenic","Intergenic",28619,"NR_040681",69999,"Mm.261413","NR_040681","ENSMUSG00000100911","1700027F09Rik","-","RIKEN cDNA 1700027F09 gene","ncRNA"]
[2525,"chr8",123994361,123995290,"+",0,"NA","Intergenic","PB1D11|SINE|Alu",-11703,"NM_019552",56199,"Mm.274243","NM_019552","ENSMUSG00000031974","Abcb10","Abc-me|Abcb12","ATP-binding cassette, sub-family B (MDR/TAP), member 10","protein-coding"]
[1282,"chr18",20187250,20192022,"+",0,"NA","Intergenic","Intergenic",-57704,"NM_181680",211924,"Mm.391118","NM_181680",null,"Dsg1c","9330156N18|Dsg1gamma|Dsg6|dsg1g","desmoglein 1 gamma","protein-coding"]
[1694,"chr3",57554170,57554967,"+",0,"NA","intron (NM_001168281, intron 2 of 6)","intron (NM_001168281, intron 2 of 6)",21308,"NM_133784",97064,"Mm.405029","NM_133784","ENSMUSG00000027803","Wwtr1","2310058J06Rik|2610021I22Rik|C78399|Taz","WW domain containing transcription regulator 1","protein-coding"]
[841,"chr14",47366160,47366616,"+",0,"NA","Intergenic","B4A|SINE|B4",-7472,"NM_010705",16854,"Mm.248615","NM_010705","ENSMUSG00000050335","Lgals3","GBP|L-34|Mac-2|gal3","lectin, galactose binding, soluble 3","protein-coding"]
[1898,"chr4",112442059,112442546,"+",0,"NA","Intergenic","Intergenic",-8317,"NM_177864",329918,"Mm.246783","NM_177864","ENSMUSG00000049972","Skint9","A030013N09Rik|Skint-9","selection and upkeep of intraepithelial T cells 9","protein-coding"]
[1044,"chr16",11461453,11461869,"+",0,"NA","intron (NM_001290148, intron 6 of 13)","intron (NM_001290148, intron 6 of 13)",56013,"NM_001290148",74478,"Mm.325831","NM_028964","ENSMUSG00000071669","Snx29","4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a","sorting nexin 29","protein-coding"]
[1350,"chr18",83333817,83333927,"+",0,"NA","Intergenic","Intergenic",-7988,"NR_045361",70960,"Mm.410834","NR_045361",null,"4921531P14Rik","1700108N05Rik","RIKEN cDNA 4921531P14 gene","ncRNA"]
[1751,"chr3",96576247,96577305,"+",0,"NA","Intergenic","Intergenic",-9975,"NR_040409",100038464,"Mm.475126","NR_040409","ENSMUSG00000074398","Gm15441","ENSMUSG00000074398|OTTMUSG00000021867","predicted gene 15441","ncRNA"]
[91,"chr1",107470419,107472795,"+",0,"NA","Intergenic","(TGAA)n|Simple_repeat|Simple_repeat",-39816,"NM_001174170",18788,"Mm.271870","NM_011111","ENSMUSG00000062345","Serpinb2","PAI-2|Planh2|ovalbumin","serine (or cysteine) peptidase inhibitor, clade B, member 2","protein-coding"]
[2137,"chr6",37735435,37735563,"+",0,"NA","Intergenic","Intergenic",-135312,"NM_001272064",21848,"Mm.41063","NM_145076",null,"Trim24","A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a","tripartite motif-containing 24","protein-coding"]
[1240,"chr17",74285308,74286334,"+",0,"NA","intron (NM_133771, intron 1 of 8)","intron (NM_133771, intron 1 of 8)",9042,"NM_133771",76890,"Mm.311874","NM_133771","ENSMUSG00000058704","Memo1","0610016J10Rik|D930048L02Rik","mediator of cell motility 1","protein-coding"]
[467,"chr11",98057682,98058382,"+",0,"NA","Intergenic","Intergenic",-4570,"NM_146028",217154,"Mm.181008","NM_146028","ENSMUSG00000017400","Stac2","24b2|24b2/STAC2|AW240854","SH3 and cysteine rich domain 2","protein-coding"]
[2121,"chr6",17316146,17316714,"+",0,"NA","intron (NM_001243064, intron 1 of 1)","intron (NM_001243064, intron 1 of 1)",8790,"NM_001243064",12389,"Mm.28278","NM_007616","ENSMUSG00000007655","Cav1","Cav|Cav-1","caveolin 1, caveolae protein","protein-coding"]
[474,"chr11",99061600,99062144,"+",0,"NA","Intergenic","Intergenic",20612,"NM_010517",16010,"Mm.233799","NM_010517",null,"Igfbp4","AI875747|Deb2|IGFBP-4","insulin-like growth factor binding protein 4","protein-coding"]
[481,"chr11",99402882,99403785,"+",0,"NA","Intergenic","B3|SINE|B2",-13969,"NM_010660",16661,"Mm.22662","NM_010660","ENSMUSG00000019761","Krt10","D130054E02Rik|K10|K1C1|Krt-1.10|Krt1-10","keratin 10","protein-coding"]
[867,"chr14",71104400,71104522,"+",0,"NA","Intergenic","Intergenic",-146812,"NR_046075",100043132,"Mm.399336","NR_046075",null,"Gm4251","-","predicted gene 4251","ncRNA"]
[1976,"chr4",150581883,150584866,"+",0,"NA","intron (NM_001085492, intron 12 of 22)","intron (NM_001085492, intron 12 of 22)",68800,"NM_173774",242773,"Mm.29280","NM_173774",null,"Slc45a1","C230078B22|Dnb5","solute carrier family 45, member 1","protein-coding"]
[817,"chr13",114735455,114735929,"+",0,"NA","Intergenic","MT2A|LTR|ERVL",-82545,"NM_013826",17434,"Mm.19027","NM_013826","ENSMUSG00000015536","Mocs2","AI415403","molybdenum cofactor synthesis 2","protein-coding"]
[563,"chr12",51865421,51866136,"+",0,"NA","Intergenic","Intergenic",-36242,"NM_144788",207304,"Mm.249391","NM_144788","ENSMUSG00000035247","Hectd1","A630086P08Rik|AI844876|b2b327Clo|opm","HECT domain containing 1","protein-coding"]
[229,"chr10",18491449,18492245,"+",0,"NA","intron (NM_001163592, intron 2 of 7)","intron (NM_001163592, intron 2 of 7)",21866,"NM_001163592",215819,"Mm.297971","NM_173390","ENSMUSG00000039835","Nhsl1","5730409E15Rik|A630035H13Rik|A730096F01|BC013565|D10Bwg0940e|mKIAA1357","NHS-like 1","protein-coding"]
[673,"chr13",3831280,3832764,"+",0,"NA","Intergenic","Intergenic",-5735,"NM_020036",80796,"Mm.21075","NM_020036","ENSMUSG00000033765","Calm4","2310037J09Rik|AI649108|DD112|Scarf","calmodulin 4","protein-coding"]
[68,"chr1",86448163,86448730,"+",0,"NA","Intergenic","Intergenic",22117,"NM_027966",71863,"Mm.179627","NM_027966","ENSMUSG00000036574","1700019O17Rik","-","RIKEN cDNA 1700019O17 gene","protein-coding"]
[2059,"chr5",103774312,103775883,"+",0,"NA","intron (NM_001080798, intron 1 of 19)","intron (NM_001080798, intron 1 of 19)",20524,"NM_001080798",17355,"Mm.6949","NM_133919","ENSMUSG00000029313","Aff1","9630032B01Rik|AW319193|Af4|Mllt2h|Rob","AF4/FMR2 family, member 1","protein-coding"]
[315,"chr10",96699243,96699467,"+",0,"NA","Intergenic","ORR1E|LTR|ERVL-MaLR",82354,"NM_007569",12226,"Mm.23811","NM_007569","ENSMUSG00000036478","Btg1","AI426953|AW546738","B cell translocation gene 1, anti-proliferative","protein-coding"]
[2514,"chr8",117667421,117668102,"+",0,"NA","intron (NM_028725, intron 1 of 2)","intron (NM_028725, intron 1 of 2)",3754,"NM_028725",74032,"Mm.296302","NM_028725","ENSMUSG00000034308","Sdr42e1","4632417N05Rik|AI117603","short chain dehydrogenase/reductase family 42E, member 1","protein-coding"]
[1827,"chr4",11422861,11423529,"+",0,"NA","Intergenic","Lx8|LINE|L1",-36412,"NM_194055",207920,"Mm.387719","NM_194055","ENSMUSG00000040728","Esrp1","2210008M09Rik|A630065D16|BC031468|Rbm35a","epithelial splicing regulatory protein 1","protein-coding"]
[2501,"chr8",106625311,106627027,"+",0,"NA","intron (NM_009864, intron 2 of 15)","intron (NM_009864, intron 2 of 15)",22819,"NM_009864",12550,"Mm.35605","NM_009864","ENSMUSG00000000303","Cdh1","AA960649|ARC-1|E-cad|Ecad|L-CAM|UVO|Um","cadherin 1","protein-coding"]
[2366,"chr7",115204457,115204995,"+",0,"NA","Intergenic","ORR1D2|LTR|ERVL-MaLR",253452,"NR_040319",101786,"Mm.395157","NR_040317",null,"A730082K24Rik","AU044236","RIKEN cDNA A730082K24 gene","ncRNA"]
[1947,"chr4",136434428,136435004,"+",0,"NA","intron (NM_001285484, intron 1 of 1)","Lx4B|LINE|L1",10104,"NM_001285484",15552,"Mm.40573","NM_008309","ENSMUSG00000070687","Htr1d","5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db","5-hydroxytryptamine (serotonin) receptor 1D","protein-coding"]
[1347,"chr18",80550895,80551145,"+",0,"NA","Intergenic","Intergenic",-6474,"NR_028424",100039348,"Mm.254722","NR_028424",null,"Gm2176","A430076E10Rik","glucosamine-6-phosphate deaminase 1 pseudogene","pseudo"]
[222,"chr10",8405746,8406272,"+",0,"NA","intron (NM_177387, intron 1 of 7)","RLTR31B2|LTR|ERVK",112816,"NM_177387",338362,"Mm.41163","NM_177387","ENSMUSG00000047712","Ust","D930010O20Rik|UA2OST","uronyl-2-sulfotransferase","protein-coding"]
[1504,"chr2",35277231,35278517,"+",0,"NA","intron (NM_001206369, intron 1 of 16)","intron (NM_001206369, intron 1 of 16)",-4506,"NM_146120",227753,"Mm.443","NM_146120","ENSMUSG00000026879","Gsn","ADF","gelsolin","protein-coding"]
[25,"chr1",51499716,51500257,"+",0,"NA","Intergenic","Intergenic",-21587,"NM_001310549",109019,"Mm.196290","NM_028696","ENSMUSG00000026107","Nabp1","4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2","nucleic acid binding protein 1","protein-coding"]
[2270,"chr7",25901647,25903124,"+",0,"NA","intron (NM_009999, intron 1 of 8)","intron (NM_009999, intron 1 of 8)",4727,"NM_009999",13088,"Mm.218749","NM_009999","ENSMUSG00000030483","Cyp2b10","Cyp2b|Cyp2b20|p16","cytochrome P450, family 2, subfamily b, polypeptide 10","protein-coding"]
[2418,"chr8",23516091,23516396,"+",0,"NA","Intergenic","Intergenic",104741,"NM_013834",20377,"Mm.281691","NM_013834","ENSMUSG00000031548","Sfrp1","2210415K03Rik|AW011917|AW107218|AW742929|sFRP-1","secreted frizzled-related protein 1","protein-coding"]
[305,"chr10",94544976,94545674,"+",0,"NA","intron (NM_172051, intron 1 of 3)","intron (NM_172051, intron 1 of 3)",-29932,"NM_001168684",319880,"Mm.23047","NM_172051","ENSMUSG00000020023","Tmcc3","AW488095|C630016B22Rik|C88213|Tmcc1","transmembrane and coiled coil domains 3","protein-coding"]
[1253,"chr17",83996353,83996466,"+",0,"NA","Intergenic","MLT1F|LTR|ERVL-MaLR",-2143,"NR_130994",78148,"Mm.243918","NR_130994",null,"8430430B14Rik","-","RIKEN cDNA 8430430B14 gene","ncRNA"]
[928,"chr15",36374026,36375092,"+",0,"NA","Intergenic","Intergenic",-91412,"NM_013923",30945,"Mm.5181","NM_013923","ENSMUSG00000022280","Rnf19a","AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp","ring finger protein 19A","protein-coding"]
[1644,"chr2",164455192,164455829,"+",0,"NA","Intergenic","MIRb|SINE|MIR",-5461,"NM_025575",66460,"Mm.44218","NM_025575","ENSMUSG00000045503","Sys1","2610042O14Rik|AI266964|C87389","SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)","protein-coding"]
[1526,"chr2",60870807,60871009,"+",0,"NA","intron (NM_020296, intron 1 of 13)","intron (NM_020296, intron 1 of 13)",10530,"NM_001141932",56878,"Mm.259667","NM_020296","ENSMUSG00000026970","Rbms1","2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1","RNA binding motif, single stranded interacting protein 1","protein-coding"]
[217,"chr10",3382151,3383046,"+",0,"NA","intron (NM_133485, intron 1 of 3)","RLTR11A2|LTR|ERVK",16448,"NM_133485",76142,"Mm.308126","NM_133485","ENSMUSG00000040653","Ppp1r14c","6330514J04Rik|KEPI","protein phosphatase 1, regulatory (inhibitor) subunit 14c","protein-coding"]
[2648,"chr9",78503145,78503613,"+",0,"NA","Intergenic","LTR72_RN|LTR|ERV1",-21655,"NM_010106",13627,"Mm.138471","NM_010106","ENSMUSG00000037742","Eef1a1","-","eukaryotic translation elongation factor 1 alpha 1","protein-coding"]
[1730,"chr3",90574479,90575380,"+",0,"NA","Intergenic","Intergenic",-15318,"NM_001195760",628324,"Mm.33816","NM_001195760","ENSMUSG00000094018","S100a2","CaN19|EG628324|S100L","S100 calcium binding protein A2","protein-coding"]
[158,"chr1",156615078,156615188,"+",0,"NA","intron (NM_001136104, intron 1 of 12)","intron (NM_001136104, intron 1 of 12)",56346,"NM_001136104",11352,"Mm.329515","NM_009595","ENSMUSG00000026596","Abl2","AA536808|Abll|Arg","v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)","protein-coding"]
[281,"chr10",69909447,69910373,"+",0,"NA","intron (NM_170689, intron 23 of 41)","B4A|SINE|B4",-15622,"NM_170687",11735,"Mm.235960","NM_009670","ENSMUSG00000069601","Ank3","2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G","ankyrin 3, epithelial","protein-coding"]
[46,"chr1",71390916,71391033,"+",0,"NA","intron (NM_175210, intron 2 of 52)","intron (NM_175210, intron 2 of 52)",23936,"NM_175210",74591,"Mm.159251","NM_175210","ENSMUSG00000050296","Abca12","4832428G11Rik|4833417A11Rik","ATP-binding cassette, sub-family A (ABC1), member 12","protein-coding"]
[1851,"chr4",56121529,56123178,"+",0,"NA","Intergenic","Intergenic",-589878,"NM_010637",16600,"Mm.4325","NM_010637","ENSMUSG00000003032","Klf4","EZF|Gklf|Zie","Kruppel-like factor 4 (gut)","protein-coding"]
[1316,"chr18",60648536,60649821,"+",0,"NA","Intergenic","Intergenic",-14232,"NR_045401",328963,"Mm.417203","NR_045401",null,"G630071F17Rik","G630071F17","RIKEN cDNA G630071F17 gene","ncRNA"]
[2630,"chr9",70526223,70528174,"+",0,"NA","Intergenic","(CA)n|Simple_repeat|Simple_repeat",-15580,"NM_026337",66660,"Mm.22379","NM_025690","ENSMUSG00000032212","Sltm","5730455C01Rik|5730555F13Rik|9130215G10Rik|Met","SAFB-like, transcription modulator","protein-coding"]
[2373,"chr7",127698887,127700638,"+",0,"NA","Intergenic","RLTR31D_MM|LTR|ERVK",-8725,"NR_030428",791073,null,"NR_030428","ENSMUSG00000076454","Mir762","Mirn762|mir-762|mmu-mir-762","microRNA 762","ncRNA"]
[1418,"chr19",45208451,45210010,"+",0,"NA","Intergenic","A-rich|Low_complexity|Low_complexity",26006,"NM_010691",16814,"Mm.116815","NM_010691",null,"Lbx1","Lbx1h","ladybird homeobox homolog 1 (Drosophila)","protein-coding"]
[36,"chr1",59729129,59729259,"+",0,"NA","Intergenic","Intergenic",24386,"NR_028521",100217421,null,"NR_028521",null,"Snord11","MBII-95","small nucleolar RNA, C/D box 11","snoRNA"]
[2263,"chr7",19818108,19818275,"+",0,"NA","intron (NM_033601, intron 2 of 8)","B1F|SINE|Alu",4564,"NM_033601",12051,"Mm.439658","NM_033601","ENSMUSG00000053175","Bcl3","AI528691|Bcl-3","B cell leukemia/lymphoma 3","protein-coding"]
[1368,"chr19",8995531,8999360,"+",0,"NA","intron (NM_009643, intron 1 of 4)","intron (NM_009643, intron 1 of 4)",8161,"NM_001286518",66395,"Mm.203866","NM_009643","ENSMUSG00000069833","Ahnak","DY6","AHNAK nucleoprotein (desmoyokin)","protein-coding"]
[748,"chr13",55189378,55189921,"+",0,"NA","Intergenic","Intergenic",-20133,"NM_008739",18193,"Mm.12964","NM_008739","ENSMUSG00000021488","Nsd1","AI528500|KMT3B","nuclear receptor-binding SET-domain protein 1","protein-coding"]
[472,"chr11",98788291,98788740,"+",0,"NA","Intergenic","Intergenic",-7254,"NM_028722",74026,"Mm.258352","NM_028722","ENSMUSG00000052915","Msl1","2810017F12Rik|4121402D02Rik|4930463F05Rik|AA682082|Msl-1","male-specific lethal 1 homolog (Drosophila)","protein-coding"]
[1655,"chr2",169589131,169590423,"+",0,"NA","Intergenic","Intergenic",-43869,"NM_080455",228911,"Mm.315789","NM_080455","ENSMUSG00000047907","Tshz2","2900073F20Rik|B830045G17|Mtsh2|Sdccag33l|Tsh2|Zfp218|mKIAA4248|teashirt2","teashirt zinc finger family member 2","protein-coding"]
[1943,"chr4",135781858,135782280,"+",0,"NA","intron (NM_001085509, intron 14 of 36)","intron (NM_001085509, intron 14 of 36)",22354,"NM_001085509",242702,"Mm.318639","NM_001085509","ENSMUSG00000037139","Myom3","8430427K15Rik|Gm434","myomesin family, member 3","protein-coding"]
[317,"chr10",96823899,96824140,"+",0,"NA","Intergenic","Intergenic",207018,"NM_007569",12226,"Mm.23811","NM_007569","ENSMUSG00000036478","Btg1","AI426953|AW546738","B cell translocation gene 1, anti-proliferative","protein-coding"]
[711,"chr13",38144842,38146673,"+",0,"NA","Intergenic","Intergenic",-5537,"NM_023842",109620,"Mm.355327","NM_023842","ENSMUSG00000054889","Dsp","2300002E22Rik|5730453H04Rik|AA407887|AA407888|AW109828|DP|rul","desmoplakin","protein-coding"]
[132,"chr1",135864252,135864567,"+",0,"NA","Intergenic","Intergenic",23548,"NM_001130176",21956,"Mm.247470","NM_011619","ENSMUSG00000026414","Tnnt2","Tnt|cTnT","troponin T2, cardiac","protein-coding"]
[1791,"chr3",127860364,127860474,"+",0,"NA","Intergenic","MT2B1|LTR|ERVL",-22927,"NM_145964",211556,"Mm.403486","NM_145964","ENSMUSG00000074238","Ap1ar","AA407621|C78909|Gadkin","adaptor-related protein complex 1 associated regulatory protein","protein-coding"]
[1254,"chr17",84025355,84025931,"+",0,"NA","Intergenic","Intergenic",27091,"NR_130994",78148,"Mm.243918","NR_130994",null,"8430430B14Rik","-","RIKEN cDNA 8430430B14 gene","ncRNA"]
[1642,"chr2",164433509,164433927,"+",0,"NA","intron (NM_011521, intron 1 of 4)","intron (NM_011521, intron 1 of 4)",9470,"NM_011521",20971,"Mm.3815","NM_011521","ENSMUSG00000017009","Sdc4","AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4","syndecan 4","protein-coding"]
[892,"chr14",101797427,101799207,"+",0,"NA","intron (NM_201529, intron 2 of 30)","intron (NM_201529, intron 2 of 30)",68389,"NM_201529",380928,"Mm.218981","NM_201529","ENSMUSG00000033060","Lmo7","C78582|FBXO20|Gm914|mKIAA0858","LIM domain only 7","protein-coding"]
[2180,"chr6",91488798,91489684,"+",0,"NA","TTS (NM_028766)","TTS (NM_028766)",15490,"NM_028766",74122,"Mm.38801","NM_028766","ENSMUSG00000030095","Tmem43","1200015A22Rik|LUMA","transmembrane protein 43","protein-coding"]
[2071,"chr5",118514675,118515304,"+",0,"NA","Intergenic","Intergenic",-45730,"NM_172424",76199,"Mm.206238","NM_172424","ENSMUSG00000018076","Med13l","2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025","mediator complex subunit 13-like","protein-coding"]
[1428,"chr19",47916284,47916416,"+",0,"NA","intron (NM_001001738, intron 1 of 1)","intron (NM_001001738, intron 1 of 1)",2949,"NM_001001738",414801,"Mm.29457","NM_001001738",null,"Itprip","4833424O12Rik|DANGER|mKIAA1754","inositol 1,4,5-triphosphate receptor interacting protein","protein-coding"]
[546,"chr12",21362092,21363610,"+",0,"NA","intron (NR_120376, intron 1 of 18)","L1MC5a|LINE|L1",10781,"NR_102380",11491,"Mm.27681","NM_009615","ENSMUSG00000052593","Adam17","CD156b|Tace","a disintegrin and metallopeptidase domain 17","protein-coding"]
[537,"chr12",4171810,4172010,"+",0,"NA","intron (NM_001159536, intron 2 of 21)","B3|SINE|B2",37757,"NM_138305",104111,"Mm.489807","NM_138305","ENSMUSG00000020654","Adcy3","AC3|mKIAA0511","adenylate cyclase 3","protein-coding"]
[1018,"chr15",100042043,100043488,"+",0,"NA","intron (NM_001159361, intron 1 of 37)","RSINE1|SINE|B4",4101,"NM_001159361",239667,"Mm.243658","NM_172819","ENSMUSG00000023026","Dip2b","4932422C22|AI317237|AI854602|mKIAA1463","DIP2 disco-interacting protein 2 homolog B (Drosophila)","protein-coding"]
[1125,"chr16",77593612,77596606,"+",0,"NA","Intergenic","Intergenic",-3827,"NR_029535",387229,null,"NR_029535","ENSMUSG00000065530","Mir99a","Mirn99a|mir-99a|mmu-mir-99a","microRNA 99a","ncRNA"]
[2279,"chr7",28924418,28925769,"+",0,"NA","intron (NM_021895, intron 1 of 20)","intron (NM_021895, intron 1 of 20)",37187,"NM_021895",60595,"Mm.81144","NM_021895","ENSMUSG00000054808","Actn4","C77391","actinin alpha 4","protein-coding"]
[1007,"chr15",96843231,96843734,"+",0,"NA","Intergenic","Intergenic",-143784,"NM_175121",67760,"Mm.46754","NM_175121","ENSMUSG00000022462","Slc38a2","5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382","solute carrier family 38, member 2","protein-coding"]
[1443,"chr2",9359523,9360556,"+",0,"NA","Intergenic","A-rich|Low_complexity|Low_complexity",170524,"NR_038180",73438,"Mm.23558","NR_038180","ENSMUSG00000085580","1700061F12Rik","-","RIKEN cDNA 1700061F12 gene","ncRNA"]
[741,"chr13",51685123,51685268,"+",0,"NA","Intergenic","Intergenic",33487,"NM_029279",75420,"Mm.275981","NM_029279","ENSMUSG00000035139","Secisbp2","2210413N07Rik|2810012K13Rik|SBP2","SECIS binding protein 2","protein-coding"]
[1833,"chr4",32304242,32305290,"+",0,"NA","Intergenic","Intergenic",-112669,"NM_001109661",12014,"Mm.491223","NM_007521","ENSMUSG00000040270","Bach2","E030004N02Rik","BTB and CNC homology 2","protein-coding"]
[1186,"chr17",27069383,27069699,"+",0,"NA","intron (NM_080553, intron 1 of 57)","intron (NM_080553, intron 1 of 57)",12237,"NM_080553",16440,"Mm.458106","NM_080553","ENSMUSG00000042644","Itpr3","Ip3r3|Itpr-3","inositol 1,4,5-triphosphate receptor 3","protein-coding"]
[998,"chr15",86205799,86206060,"+",0,"NA","Intergenic","Intergenic",-8530,"NM_145476",223754,"Mm.28904","NM_145476","ENSMUSG00000051864","Tbc1d22a","BC023106|D15Ertd781e","TBC1 domain family, member 22a","protein-coding"]
[1789,"chr3",126830786,126831374,"+",0,"NA","intron (NM_001293665, intron 15 of 19)","intron (NM_001293665, intron 15 of 19)",112306,"NM_001034168",109676,"Mm.220242","NM_178655","ENSMUSG00000032826","Ank2","AI835472|AW491075|Ank-2","ankyrin 2, brain","protein-coding"]
[2240,"chr6",135250649,135253251,"+",0,"NA","intron (NM_001080553, intron 1 of 5)","intron (NM_001080553, intron 1 of 5)",2386,"NM_010352",14840,"Mm.272306","NM_010352","ENSMUSG00000030206","Gsg1","-","germ cell-specific gene 1","protein-coding"]
[2076,"chr5",122131063,122132232,"+",0,"NA","intron (NM_183307, intron 2 of 12)","intron (NM_183307, intron 2 of 12)",3246,"NM_001289811",330188,"Mm.386907","NM_183307","ENSMUSG00000043036","Ccdc63","4921511C16Rik","coiled-coil domain containing 63","protein-coding"]
[529,"chr11",120354667,120354873,"+",0,"NA","Intergenic","Intergenic",6092,"NR_038126",66838,"Mm.375010","NR_038126","ENSMUSG00000043644","0610009L18Rik","-","RIKEN cDNA 0610009L18 gene","ncRNA"]
[1545,"chr2",79566684,79567165,"+",0,"NA","Intergenic","MIRb|SINE|MIR",-68501,"NM_080558",70599,"Mm.272881","NM_080558","ENSMUSG00000027007","Ssfa2","5730488C15Rik|CS-1|CS1|KRAP|SPAG13|mKIAA1927","sperm specific antigen 2","protein-coding"]
[1838,"chr4",40774101,40774228,"+",0,"NA","Intergenic","Intergenic",-16279,"NM_021535",74255,"Mm.289929","NM_021535",null,"Smu1","2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd","smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)","protein-coding"]
[1773,"chr3",107740547,107741366,"+",0,"NA","TTS (NM_007778)","TTS (NM_007778)",19513,"NM_001113530",12977,"Mm.795","NM_007778","ENSMUSG00000014599","Csf1","C87615|Csfm|MCSF|op","colony stimulating factor 1 (macrophage)","protein-coding"]
[1058,"chr16",22365409,22366478,"+",0,"NA","Intergenic","Intergenic",73627,"NM_023794",104156,"Mm.155708","NM_023794","ENSMUSG00000013089","Etv5","1110005E01Rik|8430401F14Rik|ERM","ets variant 5","protein-coding"]
[2573,"chr9",43316356,43316919,"+",0,"NA","intron (NM_023655, intron 1 of 8)","intron (NM_023655, intron 1 of 8)",5874,"NM_023655",72169,"Mm.273277","NM_023655","ENSMUSG00000032013","Trim29","1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726","tripartite motif-containing 29","protein-coding"]
[987,"chr15",80649463,80649857,"+",0,"NA","3' UTR (NM_010815, exon 7 of 7)","3' UTR (NM_010815, exon 7 of 7)",3587,"NR_105922",102466773,null,"NR_105922","ENSMUSG00000098631","Mir6957","Gm27895|mmu-mir-6957","microRNA 6957","ncRNA"]
[1150,"chr16",95749926,95750059,"+",0,"NA","Intergenic","Intergenic",47585,"NM_011809",23872,"Mm.290207","NM_011809","ENSMUSG00000022895","Ets2","AU022856|Ets-2","E26 avian leukemia oncogene 2, 3' domain","protein-coding"]
[1535,"chr2",71805649,71806207,"+",0,"NA","intron (NM_001277970, intron 1 of 24)","intron (NM_001277970, intron 1 of 24)",18989,"NM_001277970",16403,"Mm.225096","NM_008397",null,"Itga6","5033401O05Rik|AI115430|Cd49f|VLA-6","integrin alpha 6","protein-coding"]
[2390,"chr7",133792943,133793160,"+",0,"NA","intron (NM_025850, intron 1 of 10)","intron (NM_025850, intron 1 of 10)",-10266,"NM_001286031",101437,"Mm.199223","NM_133941","ENSMUSG00000030986","Dhx32","3110079L04Rik|4732469F02Rik|AA408140|Ddx32","DEAH (Asp-Glu-Ala-His) box polypeptide 32","protein-coding"]
[1335,"chr18",65625973,65628337,"+",0,"NA","intron (NM_207255, intron 3 of 5)","intron (NM_207255, intron 3 of 5)",-7540,"NR_105742",100526497,null,"NR_105742","ENSMUSG00000077113","Mir466p","mmu-mir-466p","microRNA 466p","ncRNA"]
[908,"chr14",120279174,120279338,"+",0,"NA","intron (NM_175341, intron 1 of 8)","intron (NM_175341, intron 1 of 8)",3587,"NM_175341",105559,"Mm.238266","NM_175341","ENSMUSG00000022139","Mbnl2","1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072","muscleblind-like 2","protein-coding"]
[2580,"chr9",43788103,43788277,"+",0,"NA","intron (NM_021424, intron 1 of 5)","intron (NM_021424, intron 1 of 5)",43614,"NM_021424",58235,"Mm.335096","NM_021424","ENSMUSG00000032012","Pvrl1","AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|nectin-1","poliovirus receptor-related 1","protein-coding"]
[284,"chr10",70263201,70264095,"+",0,"NA","intron (NM_025807, intron 2 of 5)","intron (NM_025807, intron 2 of 5)",18372,"NM_025807",66859,"Mm.19325","NM_025807","ENSMUSG00000037762","Slc16a9","1200003C15Rik|4930425B13Rik|AI552636","solute carrier family 16 (monocarboxylic acid transporters), member 9","protein-coding"]
[1340,"chr18",69992856,69993004,"+",0,"NA","intron (NM_001302799, intron 3 of 5)","intron (NM_001302799, intron 3 of 5)",60658,"NM_001302798",80718,"Mm.246753","NM_030554","ENSMUSG00000024511","Rab27b","2310021G14Rik|B130064M09Rik","RAB27B, member RAS oncogene family","protein-coding"]
[903,"chr14",118180687,118180819,"+",0,"NA","Intergenic","Intergenic",43626,"NM_021434",58245,"Mm.275411","NM_021434","ENSMUSG00000022131","Gpr180","AB041545|E130016I23Rik|Itr","G protein-coupled receptor 180","protein-coding"]
[247,"chr10",40263491,40263783,"+",0,"NA","Intergenic","MER5A|DNA|hAT-Charlie",-5972,"NM_026113",67371,"Mm.64104","NM_026113","ENSMUSG00000019837","Gtf3c6","2410016F19Rik|AU019813","general transcription factor IIIC, polypeptide 6, alpha","protein-coding"]
[165,"chr1",161607966,161608117,"+",0,"NA","Intergenic","Intergenic",113384,"NM_183391",240873,"Mm.276823","NM_183391","ENSMUSG00000066755","Tnfsf18","Gitrl","tumor necrosis factor (ligand) superfamily, member 18","protein-coding"]
[289,"chr10",78722488,78722884,"+",0,"NA","Intergenic","Intergenic",-4393,"NM_009809",12365,"Mm.20940","NM_009809","ENSMUSG00000005355","Casp14","MICE|mini-ICE","caspase 14","protein-coding"]
[2351,"chr7",102397739,102399274,"+",0,"NA","intron (NM_009287, intron 3 of 11)","intron (NM_009287, intron 3 of 11)",-43189,"NM_009103",20133,"Mm.197486","NM_009103","ENSMUSG00000030978","Rrm1","RnrM1","ribonucleotide reductase M1","protein-coding"]
[729,"chr13",45837493,45837625,"+",0,"NA","intron (NM_009124, intron 3 of 7)","intron (NM_009124, intron 3 of 7)",127432,"NM_001199304",20238,"Mm.342683","NM_009124","ENSMUSG00000046876","Atxn1","2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1","ataxin 1","protein-coding"]
[2119,"chr6",17169714,17170472,"+",0,"NA","Intergenic","Intergenic",-27658,"NR_102305",319682,"Mm.136046","NR_102304","ENSMUSG00000085171","D830026I12Rik","-","RIKEN cDNA D830026I12 gene","ncRNA"]
[2,"chr1",13304807,13305950,"+",0,"NA","intron (NM_008678, intron 1 of 22)","intron (NM_008678, intron 1 of 22)",67051,"NM_001302702",17978,"Mm.2537","NM_008678","ENSMUSG00000005886","Ncoa2","D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75","nuclear receptor coactivator 2","protein-coding"]
[808,"chr13",112054389,112055599,"+",0,"NA","Intergenic","Intergenic",187058,"NR_130345",102636620,"Mm.402328","NR_130345","ENSMUSG00000086111","Gm15326","OTTMUSG00000020187","predicted gene 15326","ncRNA"]
[845,"chr14",47943314,47944343,"+",0,"NA","intron (NR_045959, intron 3 of 3)","intron (NR_045959, intron 3 of 3)",44964,"NR_045959",73961,"Mm.390702","NR_045959",null,"4930447J18Rik","4930425M13Rik","RIKEN cDNA 4930447J18 gene","ncRNA"]
[2125,"chr6",17575202,17575402,"+",0,"NA","Intergenic","B4A|SINE|B4",-61796,"NM_007604",12343,"Mm.392504","NM_007604",null,"Capza2","1110053K06Rik|AW208808|Cappa2","capping protein (actin filament) muscle Z-line, alpha 2","protein-coding"]
[2553,"chr9",22386639,22386833,"+",0,"NA","intron (NM_028390, intron 1 of 23)","MER105|DNA|DNA",2470,"NM_028390",68743,"Mm.282751","NM_028390","ENSMUSG00000036777","Anln","1110037A17Rik|2900037I21Rik|C78101|Scraps","anillin, actin binding protein","protein-coding"]
[1847,"chr4",45511601,45511873,"+",0,"NA","intron (NM_001033306, intron 1 of 5)","intron (NM_001033306, intron 1 of 5)",19091,"NM_001033306",230126,"Mm.251716","NM_001033306","ENSMUSG00000044813","Shb","BC028832","src homology 2 domain-containing transforming protein B","protein-coding"]
[1231,"chr17",70727241,70729815,"+",0,"NA","intron (NM_001128181, intron 5 of 9)","PB1D10|SINE|Alu",118249,"NM_001164077",21815,"Mm.101034","NM_009372","ENSMUSG00000047407","Tgif1","AA959811|AI462167|Tgif","TGFB-induced factor homeobox 1","protein-coding"]
[1249,"chr17",83888968,83890710,"+",0,"NA","Intergenic","Intergenic",-43049,"NM_025325",107766,"Mm.30100","NM_025325","ENSMUSG00000000673","Haao","0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO","3-hydroxyanthranilate 3,4-dioxygenase","protein-coding"]
[147,"chr1",138643673,138643824,"+",0,"NA","intron (NR_040304, intron 4 of 4)","MLT1N2|LTR|ERVL-MaLR",-23991,"NM_001311148",59125,"Mm.143817","NM_021605","ENSMUSG00000026393","Nek7","2810460C19Rik|AU020186","NIMA (never in mitosis gene a)-related expressed kinase 7","protein-coding"]
[2446,"chr8",68253192,68253365,"+",0,"NA","Intergenic","ORR1D2|LTR|ERVL-MaLR",-23250,"NM_028182",72281,"Mm.40974","NM_028182","ENSMUSG00000053886","Sh2d4a","2210402M20Rik|SH2A","SH2 domain containing 4A","protein-coding"]
[973,"chr15",66998520,66999165,"+",0,"NA","Intergenic","Intergenic",-29201,"NM_008681",17988,"Mm.30837","NM_008681","ENSMUSG00000005125","Ndrg1","CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5","N-myc downstream regulated gene 1","protein-coding"]
[2569,"chr9",43132276,43132883,"+",0,"NA","intron (NM_011139, intron 10 of 12)","intron (NM_011139, intron 10 of 12)",-16009,"NM_001034863",235300,"Mm.261326","NM_001034863","ENSMUSG00000048503","Tmem136","AA396355|Gm184","transmembrane protein 136","protein-coding"]
[1046,"chr16",14371915,14372721,"+",0,"NA","intron (NM_008576, intron 1 of 30)","ID_B1|SINE|B4",10760,"NM_008576",17250,"Mm.196634","NM_008576","ENSMUSG00000023088","Abcc1","Abcc1a|Abcc1b|MRP|Mdrap|Mrp1","ATP-binding cassette, sub-family C (CFTR/MRP), member 1","protein-coding"]
[1142,"chr16",90097754,90097954,"+",0,"NA","Intergenic","Intergenic",-44383,"NR_033476",100038709,"Mm.484070","NR_033476",null,"Gm10789","ENSMUSG00000074924","predicted gene 10789","ncRNA"]
[2095,"chr5",136014657,136017138,"+",0,"NA","intron (NM_001256096, intron 4 of 10)","intron (NM_001256096, intron 4 of 10)",21097,"NM_001256098",74198,"Mm.275574","NM_023742","ENSMUSG00000004947","Dtx2","2610524D08Rik|AA408415|AU022494|Deltex2","deltex 2 homolog (Drosophila)","protein-coding"]
[1291,"chr18",34880730,34880922,"+",0,"NA","Intergenic","L1MB7|LINE|L1",19619,"NM_007913",13653,"Mm.181959","NM_007913",null,"Egr1","A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr","early growth response 1","protein-coding"]
[2601,"chr9",61112158,61112647,"+",0,"NA","Intergenic","Intergenic",-7016,"NR_105026",66785,"Mm.158134","NR_105026",null,"4933433G08Rik","-","RIKEN cDNA 4933433G08 gene","ncRNA"]
[2599,"chr9",59653064,59654096,"+",0,"NA","Intergenic","Intergenic",-2788,"NM_011099",18746,"Mm.326167","NM_011099","ENSMUSG00000032294","Pkm","AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2","pyruvate kinase, muscle","protein-coding"]
[319,"chr10",97338319,97338452,"+",0,"NA","Intergenic","Intergenic",-85093,"NR_039547",100628616,null,"NR_039547","ENSMUSG00000105557","Mir3966","mmu-mir-3966|mu-mir-3966","microRNA 3966","ncRNA"]
[2571,"chr9",43285155,43285292,"+",0,"NA","Intergenic","Intergenic",25344,"NM_001243261",235302,"Mm.135745","NM_001243261","ENSMUSG00000095385","D630033O11Rik","Gm588","RIKEN cDNA D630033O11 gene","protein-coding"]
[1179,"chr17",24855256,24856691,"+",0,"NA","intron (NM_024284, intron 3 of 8)","intron (NM_024284, intron 3 of 8)",5306,"NM_001159626",14651,"Mm.43784","NM_024284","ENSMUSG00000024158","Hagh","BC019817|Glo-2|Glo2|Rsp29","hydroxyacyl glutathione hydrolase","protein-coding"]
[1052,"chr16",20677794,20677983,"+",0,"NA","intron (NM_001304432, intron 6 of 31)","intron (NM_001304432, intron 6 of 31)",5161,"NM_001304432",208643,"Mm.260256","NM_145941","ENSMUSG00000045983","Eif4g1","E030015G23Rik|eIF-4-gamma 1|eIF-4G 1|eIF-4G1|eIF4GI","eukaryotic translation initiation factor 4, gamma 1","protein-coding"]
[1922,"chr4",129082142,129082490,"+",0,"NA","intron (NM_029219, intron 7 of 8)","intron (NM_029219, intron 7 of 8)",-23214,"NM_025452",66260,"Mm.25295","NM_025452","ENSMUSG00000028786","Tmem54","1810017F10Rik|AI507302","transmembrane protein 54","protein-coding"]
[735,"chr13",46965483,46965619,"+",0,"NA","Intergenic","MTEa|LTR|ERVL-MaLR",-35833,"NM_010617",16553,"Mm.342703","NM_010617","ENSMUSG00000021375","Kif13a","4930505I07Rik|mKIAA4109","kinesin family member 13A","protein-coding"]
[1493,"chr2",32878902,32879500,"+",0,"NA","intron (NM_146119, intron 1 of 13)","B3|SINE|B2",3067,"NM_146119",227737,"Mm.301646","NM_146119","ENSMUSG00000026796","Fam129b","9130404D14Rik","family with sequence similarity 129, member B","protein-coding"]
[2397,"chr7",141048199,141049329,"+",0,"NA","Intergenic","Intergenic",-12510,"NM_177897",330671,"Mm.133741","NM_177897","ENSMUSG00000055629","B4galnt4","BC038881|Gm1095|beta4GalNAcT4","beta-1,4-N-acetyl-galactosaminyl transferase 4","protein-coding"]
[974,"chr15",73067904,73068202,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-6849,"NM_001164643",76510,"Mm.158902","NM_029640","ENSMUSG00000047921","Trappc9","1810044A24Rik|2900005P22Rik|4632408O18Rik|Ibp|Nibp|TRS130|mKIAA1882","trafficking protein particle complex 9","protein-coding"]
[2629,"chr9",70511631,70512042,"+",0,"NA","Intergenic","Intergenic",-8111,"NM_033604",93836,"Mm.29783","NM_033604","ENSMUSG00000032217","Rnf111","ARK|Arkadia","ring finger 111","protein-coding"]
[1271,"chr18",6275827,6276808,"+",0,"NA","Intergenic","Intergenic",-34793,"NM_008448",16573,"Mm.223744","NM_008448","ENSMUSG00000006740","Kif5b","AL022807|Khc|Khcs|Kns1|Ukhc","kinesin family member 5B","protein-coding"]
[1668,"chr3",10292427,10292539,"+",0,"NA","intron (NM_029310, intron 1 of 5)","intron (NM_029310, intron 1 of 5)",8700,"NM_029310",75497,"Mm.47052","NM_029310","ENSMUSG00000027530","Fabp12","1700008G05Rik","fatty acid binding protein 12","protein-coding"]
[1715,"chr3",86011161,86011326,"+",0,"NA","Intergenic","ORR1D1|LTR|ERVL-MaLR",-8752,"NM_001001650",368202,"Mm.253822","NM_001001650","ENSMUSG00000049013","Prss48","Esspl|Gm1019","protease, serine 48","protein-coding"]
[344,"chr11",4189311,4191919,"+",0,"NA","intron (NM_134023, intron 1 of 8)","intron (NM_134023, intron 1 of 8)",3782,"NM_134023",103724,"Mm.28140","NM_134023","ENSMUSG00000034412","Tbc1d10a","AI447804|EPI64|Tbc1d10|mFLJ00288","TBC1 domain family, member 10a","protein-coding"]
[1613,"chr2",145363305,145363439,"+",0,"NA","intron (NM_053195, intron 2 of 16)","HAL1|LINE|L1",120761,"NM_053195",94249,"Mm.217171","NM_053195","ENSMUSG00000063873","Slc24a3","NCKX3","solute carrier family 24 (sodium/potassium/calcium exchanger), member 3","protein-coding"]
[2103,"chr5",143517345,143518127,"+",0,"NA","intron (NM_009007, intron 1 of 5)","intron (NM_009007, intron 1 of 5)",10257,"NM_009007",19353,"Mm.292510","NM_009007","ENSMUSG00000001847","Rac1","AL023026|D5Ertd559e","RAS-related C3 botulinum substrate 1","protein-coding"]
[636,"chr12",85973365,85973485,"+",0,"NA","intron (NM_001081423, intron 29 of 33)","intron (NM_001081423, intron 29 of 33)",105616,"NM_009368",21809,"Mm.3992","NM_009368","ENSMUSG00000021253","Tgfb3","TGF-beta-3|Tgfb-3","transforming growth factor, beta 3","protein-coding"]
[1710,"chr3",84961670,84962493,"+",0,"NA","intron (NM_001177773, intron 6 of 13)","MTB_Mm|LTR|ERVL-MaLR",3499,"NM_001040461",654362,"Mm.466598","NM_001040461",null,"Dear1","Dear|Despr","dual endothelin 1/angiotensin II receptor 1","protein-coding"]
[1406,"chr19",34118862,34121339,"+",0,"NA","intron (NM_023903, intron 9 of 9)","intron (NM_023903, intron 9 of 9)",19157,"NM_023903",78753,"Mm.195937","NM_023903","ENSMUSG00000056078","Lipm","4632427C23Rik|AW227514|Lipl3","lipase, family member M","protein-coding"]
[1104,"chr16",45902981,45903679,"+",0,"NA","Intergenic","Intergenic",-58952,"NM_001252442",208177,"Mm.211477","NM_153412","ENSMUSG00000033149","Phldb2","AV253284|C820004H04Rik|LL5b|LL5beta","pleckstrin homology-like domain, family B, member 2","protein-coding"]
[2224,"chr6",125467792,125469199,"+",0,"NA","intron (NM_007657, intron 2 of 7)","intron (NM_007657, intron 2 of 7)",26260,"NM_007657",12527,"Mm.210676","NM_007657","ENSMUSG00000030342","Cd9","Tspan29","CD9 antigen","protein-coding"]
[1133,"chr16",85141192,85141329,"+",0,"NA","intron (NM_007471, intron 1 of 15)","GA-rich|Low_complexity|Low_complexity",32447,"NM_001198825",11820,"Mm.277585","NM_007471","ENSMUSG00000022892","App","Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp","amyloid beta (A4) precursor protein","protein-coding"]
[2421,"chr8",24420667,24421628,"+",0,"NA","Intergenic","Intergenic",17799,"NM_026931",69068,"Mm.25775","NM_026931",null,"1810011O10Rik","1110065B09Rik|AW121743|AW321058","RIKEN cDNA 1810011O10 gene","protein-coding"]
[209,"chr1",193519086,193519987,"+",0,"NA","Intergenic","Intergenic",-12006,"NR_029592",387201,null,"NR_029592","ENSMUSG00000065533","Mir205","Mirn205|mir-205|mmu-mir-205","microRNA 205","ncRNA"]
[1905,"chr4",120072225,120072335,"+",0,"NA","intron (NM_010657, intron 3 of 8)","intron (NM_010657, intron 3 of 8)",-89144,"NM_007902",13615,"Mm.284855","NM_007902","ENSMUSG00000028635","Edn2","VIC","endothelin 2","protein-coding"]
[1118,"chr16",57481280,57481580,"+",0,"NA","intron (NM_001040397, intron 1 of 4)","intron (NM_001040397, intron 1 of 4)",-67812,"NM_001177871",78749,"Mm.328360","NM_001040397","ENSMUSG00000043336","Filip1l","4631422O05Rik|Doc1","filamin A interacting protein 1-like","protein-coding"]
[1575,"chr2",110709742,110711031,"+",0,"NA","intron (NM_001128103, intron 14 of 26)","intron (NM_001128103, intron 14 of 26)",-11108,"NM_001290786",269328,"Mm.32566","NM_172979","ENSMUSG00000050808","Muc15","4732460E09|D730046L02Rik|MUC-15","mucin 15","protein-coding"]
[117,"chr1",133162506,133162828,"+",0,"NA","Intergenic","MIRc|SINE|MIR",31501,"NM_133819",108954,"Mm.293628","NM_133819","ENSMUSG00000046062","Ppp1r15b","1810033K10Rik|AI606441|C530022L24Rik|CReP","protein phosphatase 1, regulatory (inhibitor) subunit 15b","protein-coding"]
[2428,"chr8",26886946,26888286,"+",0,"NA","Intergenic","Intergenic",-63193,"NR_045904",72316,"Mm.490534","NR_045904","ENSMUSG00000100335","2310008N11Rik","-","RIKEN cDNA 2310008N11 gene","ncRNA"]
[2207,"chr6",119414912,119415076,"+",0,"NA","intron (NM_197985, intron 1 of 7)","intron (NM_197985, intron 1 of 7)",2489,"NM_197985",68465,"Mm.291826","NM_197985","ENSMUSG00000030168","Adipor2","1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2","adiponectin receptor 2","protein-coding"]
[600,"chr12",73755281,73755498,"+",0,"NA","intron (NM_001313977, intron 11 of 14)","L2c|LINE|L2",-145935,"NM_001313920",15251,"Mm.3879","NM_010431","ENSMUSG00000021109","Hif1a","AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78","hypoxia inducible factor 1, alpha subunit","protein-coding"]
[80,"chr1",93158456,93158718,"+",0,"NA","intron (NM_172411, intron 2 of 5)","intron (NM_172411, intron 2 of 5)",2283,"NM_001159940",71874,"Mm.158766","NM_172411","ENSMUSG00000034159","2310007B03Rik","-","RIKEN cDNA 2310007B03 gene","protein-coding"]
[336,"chr10",117662857,117664057,"+",0,"NA","intron (NM_027468, intron 3 of 8)","intron (NM_027468, intron 3 of 8)",33957,"NM_027468",70574,"Mm.339332","NM_027468","ENSMUSG00000020183","Cpm","1110060I01Rik|5730456K23Rik|AA589379|E030045M14Rik","carboxypeptidase M","protein-coding"]
[2472,"chr8",90876223,90877087,"+",0,"NA","intron (NM_177224, intron 2 of 39)","intron (NM_177224, intron 2 of 39)",47820,"NM_177224",109151,"Mm.100615","NM_177224","ENSMUSG00000056608","Chd9","1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308","chromodomain helicase DNA binding protein 9","protein-coding"]
[457,"chr11",96836325,96837237,"+",0,"NA","Intergenic","ORR1A2|LTR|ERVL-MaLR",-6813,"NM_008686",18023,"Mm.6743","NM_008686","ENSMUSG00000038615","Nfe2l1","AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11","nuclear factor, erythroid derived 2,-like 1","protein-coding"]
[1301,"chr18",37883850,37884438,"+",0,"NA","intron (NM_001305981, intron 18 of 28)","intron (NM_001305981, intron 18 of 28)",-29484,"NR_105945",102465592,null,"NR_105945","ENSMUSG00000098706","Mir6979","Gm27524|mmu-mir-6979","microRNA 6979","ncRNA"]
[821,"chr14",20297624,20298196,"+",0,"NA","intron (NM_026341, intron 1 of 8)","intron (NM_026341, intron 1 of 8)",3220,"NM_026341",67725,"Mm.317636","NM_026341","ENSMUSG00000021809","Nudt13","4933433B15Rik","nudix (nucleoside diphosphate linked moiety X)-type motif 13","protein-coding"]
[696,"chr13",34210236,34210925,"+",0,"NA","intron (NM_001033167, intron 4 of 10)","intron (NM_001033167, intron 4 of 10)",47616,"NM_001110515",69666,"Mm.24788","NM_001101430","ENSMUSG00000071451","Psmg4","PAC-4|mPAC4","proteasome (prosome, macropain) assembly chaperone 4","protein-coding"]
[383,"chr11",53331460,53332018,"+",0,"NA","intron (NM_026479, intron 3 of 3)","B3A|SINE|B2",7050,"NM_026479",67966,"Mm.288072","NM_026479","ENSMUSG00000018239","Zcchc10","2410141K03Rik|AA675321|D11Ertd416e","zinc finger, CCHC domain containing 10","protein-coding"]
[2532,"chr8",126613036,126615682,"+",0,"NA","Intergenic","Intergenic",-20923,"NM_001164598",270110,"Mm.334918","NM_001164598","ENSMUSG00000051495","Irf2bp2","E130305N23Rik|IRF-2BP2","interferon regulatory factor 2 binding protein 2","protein-coding"]
[1873,"chr4",82849892,82850597,"+",0,"NA","intron (NM_026647, intron 2 of 8)","intron (NM_026647, intron 2 of 8)",9417,"NM_026647",68268,"Mm.32047","NM_026647","ENSMUSG00000028403","Zdhhc21","9130404H11Rik|AL024349|D130004H04Rik|dep","zinc finger, DHHC domain containing 21","protein-coding"]
[1721,"chr3",88496050,88497614,"+",0,"NA","intron (NM_001002011, intron 1 of 11)","intron (NM_001002011, intron 1 of 11)",-3520,"NM_019390",16905,"Mm.243014","NM_019390","ENSMUSG00000028063","Lmna","Dhe","lamin A","protein-coding"]
[2497,"chr8",106576548,106578217,"+",0,"NA","Intergenic","Intergenic",-9761,"NR_045470",68692,"Mm.416843","NR_045470","ENSMUSG00000099139","1110028F18Rik","-","RIKEN cDNA 1110028F18 gene","ncRNA"]
[2179,"chr6",91483795,91484382,"+",0,"NA","intron (NM_028766, intron 10 of 11)","intron (NM_028766, intron 10 of 11)",10337,"NM_028766",74122,"Mm.38801","NM_028766","ENSMUSG00000030095","Tmem43","1200015A22Rik|LUMA","transmembrane protein 43","protein-coding"]
[2172,"chr6",86599113,86600789,"+",0,"NA","Intergenic","Intergenic",-28223,"NM_026414",67855,"Mm.183043","NM_026414","ENSMUSG00000033508","Asprv1","2300003P22Rik|AA986851|SASP|SASPase|Taps","aspartic peptidase, retroviral-like 1","protein-coding"]
[1431,"chr19",55327980,55328272,"+",0,"NA","intron (NM_001293685, intron 2 of 8)","intron (NM_001293685, intron 2 of 8)",12069,"NM_001293686",53611,"Mm.258637","NM_016862",null,"Vti1a","1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2","vesicle transport through interaction with t-SNAREs 1A","protein-coding"]
[92,"chr1",107501594,107504031,"+",0,"NA","Intergenic","Intergenic",-8611,"NM_001174170",18788,"Mm.271870","NM_011111","ENSMUSG00000062345","Serpinb2","PAI-2|Planh2|ovalbumin","serine (or cysteine) peptidase inhibitor, clade B, member 2","protein-coding"]
[1489,"chr2",32555779,32556698,"+",0,"NA","intron (NM_153560, intron 1 of 10)","intron (NM_153560, intron 1 of 10)",-14620,"NM_010073",13481,"Mm.22001","NM_010073","ENSMUSG00000026810","Dpm2","AW557993|R75484","dolichol-phosphate (beta-D) mannosyltransferase 2","protein-coding"]
[1212,"chr17",37187071,37187204,"+",0,"NA","Intergenic","Lx9|LINE|L1",-6755,"NM_023137",24108,"Mm.140210","NM_023137","ENSMUSG00000035186","Ubd","FAT10","ubiquitin D","protein-coding"]
[2253,"chr6",146441140,146442071,"+",0,"NA","intron (NM_019923, intron 2 of 56)","intron (NM_019923, intron 2 of 56)",60618,"NM_010586",16439,"Mm.7800","NM_010586","ENSMUSG00000030287","Itpr2","AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2","inositol 1,4,5-triphosphate receptor 2","protein-coding"]
[2433,"chr8",40995227,40996385,"+",0,"NA","intron (NM_001286413, intron 12 of 13)","intron (NM_001286413, intron 12 of 13)",-21662,"NR_015457",78849,"Mm.440930","NR_015457","ENSMUSG00000084960","B430010I23Rik","-","RIKEN cDNA B430010I23 gene","ncRNA"]
[1805,"chr3",138738618,138739555,"+",0,"NA","Intergenic","Intergenic",-3122,"NR_121195",56224,"Mm.31927","NM_019571","ENSMUSG00000028152","Tspan5","2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9","tetraspanin 5","protein-coding"]
[1727,"chr3",89386728,89386913,"+",0,"NA","intron (NM_009565, intron 1 of 2)","intron (NM_009565, intron 1 of 2)",-5044,"NR_040403",545539,"Mm.393389","NR_040403","ENSMUSG00000074466","Gm15417","ENSMUSG00000074466|OTTMUSG00000021274","predicted gene 15417","ncRNA"]
[1477,"chr2",27630593,27631801,"+",0,"NA","Intergenic","B1F|SINE|Alu",-46004,"NM_011305",20181,"Mm.24624","NM_011305","ENSMUSG00000015846","Rxra","9530071D11Rik|Nr2b1|RXRalpha1","retinoid X receptor alpha","protein-coding"]
[1164,"chr17",6807733,6809979,"+",0,"NA","Intergenic","Intergenic",-26076,"NM_009510",22350,"Mm.277812","NM_009510","ENSMUSG00000052397","Ezr","AW146364|R75297|Vil2|p81","ezrin","protein-coding"]
[505,"chr11",106723330,106723534,"+",0,"NA","Intergenic","L3|LINE|CR1",-8151,"NM_001305157",18613,"Mm.343951","NM_008816","ENSMUSG00000020717","Pecam1","C85791|Cd31|PECAM-1|Pecam","platelet/endothelial cell adhesion molecule 1","protein-coding"]
[670,"chr13",3771010,3771229,"+",0,"NA","Intergenic","Intergenic",33199,"NM_027416",70405,"Mm.20079","NM_027416","ENSMUSG00000063130","Calml3","2310068O22Rik|AI326174","calmodulin-like 3","protein-coding"]
[1094,"chr16",31290542,31290826,"+",0,"NA","Intergenic","L2c|LINE|L2",-14987,"NR_035427",100316676,null,"NR_035427","ENSMUSG00000080468","Mir1195","Mirn1195|mmu-mir-1195","microRNA 1195","ncRNA"]
[419,"chr11",70650723,70651764,"+",0,"NA","TTS (NM_011072)","TTS (NM_011072)",3407,"NM_011072",18643,"Mm.2647","NM_011072","ENSMUSG00000018293","Pfn1","Pfn","profilin 1","protein-coding"]
[2178,"chr6",91481814,91481980,"+",0,"NA","intron (NM_028766, intron 7 of 11)","intron (NM_028766, intron 7 of 11)",8146,"NM_028766",74122,"Mm.38801","NM_028766","ENSMUSG00000030095","Tmem43","1200015A22Rik|LUMA","transmembrane protein 43","protein-coding"]
[995,"chr15",85665422,85666050,"+",0,"NA","Intergenic","Intergenic",-38037,"NR_110483",102800312,"Mm.33117","NR_110483",null,"Lincppara","Mirlet7bhg|linc-Ppara","long intergenic noncoding RNA near Ppara","ncRNA"]
[1225,"chr17",53587477,53587684,"+",0,"NA","intron (NM_001190846, intron 1 of 17)","intron (NM_001190846, intron 1 of 17)",3454,"NM_001190846",18519,"Mm.255025","NM_020005","ENSMUSG00000000708","Kat2b","A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF","K(lysine) acetyltransferase 2B","protein-coding"]
[837,"chr14",34378910,34379038,"+",0,"NA","intron (NM_153127, intron 1 of 6)","intron (NM_153127, intron 1 of 6)",3470,"NM_153127",105450,"Mm.272673","NM_153127","ENSMUSG00000041445","Mmrn2","AA986839|ENDOGLYX1|Emilin3|EndoGlyx-1","multimerin 2","protein-coding"]
[2015,"chr5",52910332,52910837,"+",0,"NA","Intergenic","Intergenic",76449,"NM_024213",52206,"Mm.272568","NM_024213",null,"Anapc4","2610306D21Rik|APC4|D5Ertd249e","anaphase promoting complex subunit 4","protein-coding"]
[290,"chr10",80075807,80076928,"+",0,"NA","intron (NM_183426, intron 4 of 31)","PB1D10|SINE|Alu",22348,"NM_001037741",625249,"Mm.332810","NM_008162","ENSMUSG00000075706","Gpx4","GPx-4|GSHPx-4|PHGPx|mtPHGPx|snGPx","glutathione peroxidase 4","protein-coding"]
[625,"chr12",80223962,80224304,"+",0,"NA","intron (NM_134156, intron 1 of 20)","intron (NM_134156, intron 1 of 20)",36238,"NM_134156",109711,"Mm.253564","NM_134156","ENSMUSG00000015143","Actn1","3110023F10Rik|Actn1a","actinin, alpha 1","protein-coding"]
[149,"chr1",151289874,151290009,"+",0,"NA","Intergenic","RMER10B|LTR|ERVL",-54557,"NM_001039512",117198,"Mm.33764","NM_028582","ENSMUSG00000023150","Ivns1abp","1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850","influenza virus NS1A binding protein","protein-coding"]
[712,"chr13",38156084,38158305,"+",0,"NA","intron (NM_023842, intron 1 of 23)","intron (NM_023842, intron 1 of 23)",5900,"NM_023842",109620,"Mm.355327","NM_023842","ENSMUSG00000054889","Dsp","2300002E22Rik|5730453H04Rik|AA407887|AA407888|AW109828|DP|rul","desmoplakin","protein-coding"]
[210,"chr1",193520946,193523624,"+",0,"NA","Intergenic","Intergenic",-14755,"NR_029592",387201,null,"NR_029592","ENSMUSG00000065533","Mir205","Mirn205|mir-205|mmu-mir-205","microRNA 205","ncRNA"]
[406,"chr11",67617333,67617648,"+",0,"NA","intron (NM_001277079, intron 2 of 13)","intron (NM_001277079, intron 2 of 13)",20935,"NM_001277079",14457,"Mm.40338","NM_008088","ENSMUSG00000033066","Gas7","AW124766|B230343A10Rik|Gas7-cb","growth arrest specific 7","protein-coding"]
[2560,"chr9",37262854,37263097,"+",0,"NA","Intergenic","B3|SINE|B2",-7237,"NM_001145960",56857,"Mm.440037","NM_020258","ENSMUSG00000032122","Slc37a2","G3PP|Slc37a1|cI-2|ci2","solute carrier family 37 (glycerol-3-phosphate transporter), member 2","protein-coding"]
[2289,"chr7",34327272,34327602,"+",0,"NA","Intergenic","B3|SINE|B2",-41828,"NM_172741",233103,"Mm.491097","NM_172741","ENSMUSG00000066571","4931406P16Rik","AA553327|mKIAA0355","RIKEN cDNA 4931406P16 gene","protein-coding"]
[2312,"chr7",72498585,72498860,"+",0,"NA","Intergenic","RMER1C|Other|Other",-192127,"NM_001024703",244049,"Mm.217412","NM_001024703","ENSMUSG00000032776","Mctp2","Gm489","multiple C2 domains, transmembrane 2","protein-coding"]
[19,"chr1",39656644,39657032,"+",0,"NA","Intergenic","MTD|LTR|ERVL-MaLR",-5656,"NM_170597",263764,"Mm.122091","NM_170597","ENSMUSG00000050967","Creg2","A830098L22Rik","cellular repressor of E1A-stimulated genes 2","protein-coding"]
[2702,"chr9",111146787,111147026,"+",0,"NA","intron (NM_001164838, intron 3 of 14)","intron (NM_001164838, intron 3 of 14)",28795,"NM_001164838",71268,"Mm.302287","NM_027742","ENSMUSG00000032497","Lrrfip2","5133400F20Rik|AI850587","leucine rich repeat (in FLII) interacting protein 2","protein-coding"]
[1030,"chr15",101335179,101339564,"+",0,"NA","Intergenic","MIR|SINE|MIR",-31981,"NR_035462",100316694,null,"NR_035462","ENSMUSG00000088459","Mir1941","mmu-mir-1941","microRNA 1941","ncRNA"]
[365,"chr11",32667968,32668087,"+",0,"NA","intron (NM_001271349, intron 1 of 11)","B4|SINE|B4",25472,"NM_001271347",103583,"Mm.28017","NM_134015","ENSMUSG00000020271","Fbxw11","2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS","F-box and WD-40 domain protein 11","protein-coding"]
[2730,"chrX",7674214,7674488,"+",0,"NA","non-coding (NR_037581, exon 6 of 6)","non-coding (NR_037581, exon 6 of 6)",-2961,"NM_019755",18824,"Mm.18565","NM_019755",null,"Plp2","mIMA4","proteolipid protein 2","protein-coding"]
[763,"chr13",63120879,63121045,"+",0,"NA","intron (NM_001289924, intron 5 of 16)","intron (NM_001289924, intron 5 of 16)",-119067,"NR_110520",72061,"Mm.188105","NM_028079","ENSMUSG00000021458","2010111I01Rik","2300006M17Rik|AP-O|Aopep|mir-23b|mir-24-1|mir-27b","RIKEN cDNA 2010111I01 gene","protein-coding"]
[2593,"chr9",53967842,53968142,"+",0,"NA","intron (NM_177769, intron 1 of 10)","Lx8|LINE|L1",7309,"NM_177769",270162,"Mm.259791","NM_177769","ENSMUSG00000041986","Elmod1","4831417L10|AI428506|AI834991","ELMO/CED-12 domain containing 1","protein-coding"]
[2021,"chr5",64030210,64030786,"+",0,"NA","Intergenic","L1MC5a|LINE|L1",-14475,"NR_045384",74757,"Mm.159329","NR_045384","ENSMUSG00000106219","5830416I19Rik","-","RIKEN cDNA 5830416I19 gene","ncRNA"]
[1895,"chr4",112072275,112073821,"+",0,"NA","Intergenic","Intergenic",-8422,"NM_178786",320640,"Mm.253775","NM_178786","ENSMUSG00000055960","Skint4","9530098N22Rik","selection and upkeep of intraepithelial T cells 4","protein-coding"]
[2038,"chr5",72856215,72856498,"+",0,"NA","intron (NM_013689, intron 1 of 17)","intron (NM_013689, intron 1 of 17)",12092,"NM_001113461",21682,"Mm.319581","NM_013689","ENSMUSG00000029217","Tec","-","tec protein tyrosine kinase","protein-coding"]
[570,"chr12",69363523,69365021,"+",0,"NA","Intergenic","Intergenic",-7096,"NM_025441",66244,"Mm.46705","NM_025441","ENSMUSG00000020982","Nemf","1500011I12Rik|4933405E14Rik|Sdccag1","nuclear export mediator factor","protein-coding"]
[1880,"chr4",95076003,95076253,"+",0,"NA","Intergenic","MIRb|SINE|MIR",-23906,"NM_010591",16476,"Mm.275071","NM_010591","ENSMUSG00000052684","Jun","AP-1|Junc|c-jun","jun proto-oncogene","protein-coding"]
[252,"chr10",44078300,44078964,"+",0,"NA","Intergenic","Intergenic",-73786,"NM_172393",11630,"Mm.292082","NM_172393","ENSMUSG00000019866","Aim1","AI462491|AI463325","absent in melanoma 1","protein-coding"]
[1159,"chr17",4946565,4947107,"+",0,"NA","Intergenic","Intergenic",-48238,"NM_001085355",239985,"Mm.133401","NM_001085355","ENSMUSG00000069729","Arid1b","8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235","AT rich interactive domain 1B (SWI-like)","protein-coding"]
[883,"chr14",99605632,99606012,"+",0,"NA","Intergenic","Intergenic",307131,"NM_009769",12224,"Mm.30262","NM_009769","ENSMUSG00000005148","Klf5","4930520J07Rik|Bteb2|CKLF|IKLF","Kruppel-like factor 5","protein-coding"]
[2048,"chr5",92856566,92857961,"+",0,"NA","intron (NM_001077595, intron 1 of 9)","intron (NM_001077595, intron 1 of 9)",-40730,"NM_001077596",27428,"Mm.46014","NM_015756","ENSMUSG00000029381","Shroom3","AL022960|D5Ertd287e|Shrm|Shrm3","shroom family member 3","protein-coding"]
[655,"chr12",106904017,106904804,"+",0,"NA","Intergenic","Intergenic",-188086,"NR_015512",71033,"Mm.159404","NR_015512","ENSMUSG00000085820","4933406K04Rik","4930426M03Rik|4930485I22Rik|4933427G14Rik","RIKEN cDNA 4933406K04 gene","ncRNA"]
[421,"chr11",74763789,74764259,"+",0,"NA","Intergenic","Intergenic",-6839,"NM_026197",67493,"Mm.45748","NM_026197",null,"Mettl16","2610100D03Rik|2810013M15Rik|A830095F14Rik|AI846133|Mett10d","methyltransferase like 16","protein-coding"]
[1998,"chr5",32134269,32134491,"+",0,"NA","Intergenic","Intergenic",-2092,"NM_008037",14284,"Mm.24684","NM_008037","ENSMUSG00000029135","Fosl2","Fra-2","fos-like antigen 2","protein-coding"]
[2332,"chr7",80788261,80788598,"+",0,"NA","intron (NM_016721, intron 2 of 37)","MIRb|SINE|MIR",14902,"NM_016721",29875,"Mm.207619","NM_016721","ENSMUSG00000030536","Iqgap1","AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051","IQ motif containing GTPase activating protein 1","protein-coding"]
[1367,"chr19",8984874,8985400,"+",0,"NA","Intergenic","Intergenic",-4147,"NR_104460",66395,"Mm.203866","NM_009643","ENSMUSG00000069833","Ahnak","DY6","AHNAK nucleoprotein (desmoyokin)","protein-coding"]
[271,"chr10",67490176,67490473,"+",0,"NA","Intergenic","Intergenic",-47545,"NM_010118",13654,"Mm.290421","NM_010118","ENSMUSG00000037868","Egr2","Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6","early growth response 2","protein-coding"]
[1070,"chr16",25302605,25303389,"+",0,"NA","intron (NM_175165, intron 1 of 5)","intron (NM_175165, intron 1 of 5)",16180,"NM_175165",71338,"Mm.126851","NM_175165","ENSMUSG00000048399","Tprg","5430420C16Rik|Tprg1","transformation related protein 63 regulated","protein-coding"]
[1024,"chr15",100088508,100089460,"+",0,"NA","intron (NR_037311, intron 2 of 3)","B2_Mm1t|SINE|B2",50320,"NM_001159361",239667,"Mm.243658","NM_172819","ENSMUSG00000023026","Dip2b","4932422C22|AI317237|AI854602|mKIAA1463","DIP2 disco-interacting protein 2 homolog B (Drosophila)","protein-coding"]
[491,"chr11",100897121,100897994,"+",0,"NA","intron (NM_213659, intron 14 of 23)","intron (NM_213659, intron 14 of 23)",37073,"NM_001164062",20850,"Mm.277403","NM_011488","ENSMUSG00000004043","Stat5a","AA959963|STAT5","signal transducer and activator of transcription 5A","protein-coding"]
[1863,"chr4",57312539,57312785,"+",0,"NA","Intergenic","Intergenic",-10825,"NM_011207",545622,"Mm.246552","NM_011207","ENSMUSG00000038764","Ptpn3","9530011I20Rik|PTP-H1|PTPCL","protein tyrosine phosphatase, non-receptor type 3","protein-coding"]
[2463,"chr8",81757154,81757893,"+",0,"NA","intron (NM_001297593, intron 4 of 23)","B4|SINE|B4",414961,"NM_001297593",234515,"Mm.324468","NM_001024617","ENSMUSG00000037940","Inpp4b","E130107I17Rik","inositol polyphosphate-4-phosphatase, type II","protein-coding"]
[13,"chr1",34720017,34720323,"+",0,"NA","Intergenic","B4|SINE|B4",-81552,"NM_183019",226970,"Mm.41604","NM_183019","ENSMUSG00000037509","Arhgef4","9330140K16Rik|Asef|ENSMUSG00000070955","Rho guanine nucleotide exchange factor (GEF) 4","protein-coding"]
[2493,"chr8",106046803,106047245,"+",0,"NA","intron (NM_025518, intron 11 of 15)","intron (NM_025518, intron 11 of 15)",-12579,"NM_010901",18021,"Mm.383185","NM_010901","ENSMUSG00000031902","Nfatc3","C80703|D8Ertd281e|NFAT4|NFATx","nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3","protein-coding"]
[105,"chr1",128398488,128399716,"+",0,"NA","intron (NM_177445, intron 4 of 15)","intron (NM_177445, intron 4 of 15)",18314,"NM_177445",226414,"Mm.28693","NM_145507","ENSMUSG00000026356","Dars","5730439G15Rik","aspartyl-tRNA synthetase","protein-coding"]
[1514,"chr2",50687121,50687760,"+",0,"NA","Intergenic","Intergenic",-222244,"NR_033595",227885,"Mm.301654","NR_033595","ENSMUSG00000083270","Gm13498","OTTMUSG00000012426","heat shock protein 90 alpha (cytosolic), class B member 1 pseudogene","pseudo"]
[840,"chr14",47352240,47355410,"+",0,"NA","Intergenic","B1_Mm|SINE|Alu",-20035,"NM_010705",16854,"Mm.248615","NM_010705","ENSMUSG00000050335","Lgals3","GBP|L-34|Mac-2|gal3","lectin, galactose binding, soluble 3","protein-coding"]
[1647,"chr2",166044943,166045602,"+",0,"NA","intron (NM_008679, intron 2 of 22)","intron (NM_008679, intron 2 of 22)",52635,"NM_008679",17979,"Mm.469663","NM_008679","ENSMUSG00000027678","Ncoa3","2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip","nuclear receptor coactivator 3","protein-coding"]
[597,"chr12",71836306,71836552,"+",0,"NA","intron (NM_026102, intron 1 of 25)","intron (NM_026102, intron 1 of 25)",5361,"NM_172464",208846,"Mm.87417","NM_026102","ENSMUSG00000034574","Daam1","-","dishevelled associated activator of morphogenesis 1","protein-coding"]
[2380,"chr7",129764073,129764439,"+",0,"NA","Intergenic","B4A|SINE|B4",172393,"NM_172255",207425,"Mm.229323","NM_172255","ENSMUSG00000042055","Wdr11","2900055P10Rik|AW489876|Brwd2|mKIAA1351","WD repeat domain 11","protein-coding"]
[111,"chr1",131185101,131185323,"+",0,"NA","intron (NM_018750, intron 2 of 5)","intron (NM_018750, intron 2 of 5)",14973,"NM_001311094",54354,"Mm.248291","NM_018750","ENSMUSG00000026430","Rassf5","1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl","Ras association (RalGDS/AF-6) domain family member 5","protein-coding"]
[1411,"chr19",37959323,37960588,"+",0,"NA","intron (NM_001099634, intron 19 of 52)","intron (NM_001099634, intron 19 of 52)",83622,"NM_001099634",226101,"Mm.34674","NM_177035","ENSMUSG00000048612","Myof","2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3","myoferlin","protein-coding"]
[408,"chr11",68871177,68871736,"+",0,"NA","Intergenic","Intergenic",-17097,"NM_177060",320040,"Mm.305696","NM_177060",null,"Rnf222","9930039A11Rik","ring finger protein 222","protein-coding"]
[1480,"chr2",30199713,30199966,"+",0,"NA","intron (NM_172404, intron 1 of 13)","intron (NM_172404, intron 1 of 13)",5860,"NM_172404",70266,"Mm.216089","NM_172404","ENSMUSG00000039648","Ccbl1","2010009K05Rik|AI182306|Gtk|Kat1|KatI","cysteine conjugate-beta lyase 1","protein-coding"]
[242,"chr10",31536936,31539005,"+",0,"NA","intron (NM_001146349, intron 1 of 5)","intron (NM_001146349, intron 1 of 5)",71755,"NM_001146349",268291,"Mm.295212","NM_001146349",null,"Rnf217","AU016819|Ibrdc1","ring finger protein 217","protein-coding"]
[559,"chr12",39930507,39931213,"+",0,"NA","Intergenic","Intergenic",106516,"NM_007487",11861,"Mm.12723","NM_007487","ENSMUSG00000047446","Arl4a","AI467555|Arl4","ADP-ribosylation factor-like 4A","protein-coding"]
[1588,"chr2",129819398,129819924,"+",0,"NA","intron (NM_183262, intron 3 of 3)","intron (NM_183262, intron 3 of 3)",-18202,"NR_029452",654409,"Mm.305555","NR_029452",null,"4932416H05Rik","-","RIKEN cDNA 4932416H05 gene","ncRNA"]
[32,"chr1",54585205,54585843,"+",0,"NA","Intergenic","Intergenic",-27840,"NM_001163314",241062,"Mm.103539","NM_175508","ENSMUSG00000073678","Pgap1","5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto","post-GPI attachment to proteins 1","protein-coding"]
[443,"chr11",93888414,93889569,"+",0,"NA","intron (NM_134012, intron 1 of 15)","intron (NM_134012, intron 1 of 15)",2772,"NM_134012",103537,"Mm.210334","NM_134012","ENSMUSG00000059474","Mbtd1","AA408199|AI194990|hemp","mbt domain containing 1","protein-coding"]
[2234,"chr6",131381701,131383498,"+",0,"NA","intron (NM_139117, intron 3 of 9)","intron (NM_139117, intron 3 of 9)",5851,"NM_139117",56449,"Mm.458000","NM_011733","ENSMUSG00000030189","Ybx3","Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR","Y box protein 3","protein-coding"]
[1795,"chr3",129566481,129566651,"+",0,"NA","intron (NM_130450, intron 2 of 4)","intron (NM_130450, intron 2 of 4)",34180,"NM_130450",170439,"Mm.314113","NM_130450","ENSMUSG00000041220","Elovl6","C77826|FAE|LCE","ELOVL family member 6, elongation of long chain fatty acids (yeast)","protein-coding"]
[580,"chr12",69573290,69574620,"+",0,"NA","Intergenic","Intergenic",9073,"NM_001033236",207965,"Mm.102487","NM_001033236","ENSMUSG00000049882","Vcpkmt","Gm71|Mettl21d|Mettl221d|VCP-KMT","valosin containing protein lysine (K) methyltransferase","protein-coding"]
[2523,"chr8",123454287,123454818,"+",0,"NA","intron (NM_001281803, intron 5 of 11)","MER3|DNA|hAT-Charlie",11293,"NM_001281803",23854,"Mm.275127","NM_054046","ENSMUSG00000001482","Def8","AI449518|D8Ertd713e|DEF-8","differentially expressed in FDCP 8","protein-coding"]
[1257,"chr17",84184861,84185739,"+",0,"NA","3' UTR (NM_001001806, exon 2 of 2)","3' UTR (NM_001001806, exon 2 of 2)",2647,"NM_001001806",12193,"Mm.259321","NM_001001806","ENSMUSG00000045817","Zfp36l2","Brf2|ERF2|Tis11d","zinc finger protein 36, C3H type-like 2","protein-coding"]
[846,"chr14",52106585,52107224,"+",0,"NA","Intergenic","Intergenic",-2876,"NM_001170984",15381,"Mm.427321","NM_016884","ENSMUSG00000060373","Hnrnpc","AL022939|D14Wsu171e|Hnrpc|Hnrpc1|Hnrpc2|hnRNPC1|hnRNPC2|hnrnp-C","heterogeneous nuclear ribonucleoprotein C","protein-coding"]
[31,"chr1",53846143,53847011,"+",0,"NA","intron (NM_001001883, intron 21 of 28)","intron (NM_001001883, intron 21 of 28)",-2847,"NR_106149",102465783,null,"NR_106149","ENSMUSG00000098443","Mir7681","Gm27806|mmu-mir-7681","microRNA 7681","ncRNA"]
[1689,"chr3",52196874,52201156,"+",0,"NA","Intergenic","Intergenic",-69322,"NM_019739",56458,"Mm.29891","NM_019739",null,"Foxo1","AI876417|Afxh|FKHR|Fkhr1|Foxo1a","forkhead box O1","protein-coding"]
[2307,"chr7",67477615,67478027,"+",0,"NA","Intergenic","Intergenic",-104963,"NM_001291195",17258,"Mm.132788","NM_001033713","ENSMUSG00000030557","Mef2a","A430079H05Rik","myocyte enhancer factor 2A","protein-coding"]
[1861,"chr4",56607333,56608629,"+",0,"NA","Intergenic","Intergenic",133444,"NM_025271",11471,"Mm.251434","NM_025271","ENSMUSG00000070980","Actl7b","Tact1","actin-like 7b","protein-coding"]
[2706,"chr9",116193098,116194336,"+",0,"NA","Intergenic","(CAGGG)n|Simple_repeat|Simple_repeat",-18354,"NM_009371",21813,"Mm.172346","NM_009371","ENSMUSG00000032440","Tgfbr2","1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII","transforming growth factor, beta receptor II","protein-coding"]
[1296,"chr18",35752005,35752181,"+",0,"NA","Intergenic","Intergenic",-11539,"NM_001289591",72512,"Mm.45995","NM_028261","ENSMUSG00000024349","Tmem173","2610307O08Rik|ERIS|MPYS|Mita|STING","transmembrane protein 173","protein-coding"]
[1553,"chr2",84703441,84706644,"+",0,"NA","intron (NM_144887, intron 2 of 11)","intron (NM_144887, intron 2 of 11)",10122,"NM_144887",228136,"Mm.288508","NM_144887","ENSMUSG00000034075","Zdhhc5","1110032A17Rik|AI451382|Zisp","zinc finger, DHHC domain containing 5","protein-coding"]
[2161,"chr6",57812152,57813515,"+",0,"NA","intron (NM_146168, intron 1 of 4)","intron (NM_146168, intron 1 of 4)",12292,"NM_146168",232023,"Mm.24642","NM_146168","ENSMUSG00000037788","Vopp1","AW146242|Ecop","vesicular, overexpressed in cancer, prosurvival protein 1","protein-coding"]
[1303,"chr18",42035327,42035465,"+",0,"NA","Intergenic","Intergenic",-18314,"NM_172966",269016,"Mm.45472","NM_172966","ENSMUSG00000057719","Sh3rf2","2310046K19|9130023G24Rik|AI452083|Ppp1r39|RNF158","SH3 domain containing ring finger 2","protein-coding"]
[2133,"chr6",31125518,31126431,"+",0,"NA","intron (NR_110471, intron 3 of 3)","intron (NR_110471, intron 3 of 3)",-62881,"NR_029532",387223,null,"NR_029532","ENSMUSG00000065604","Mir29b-1","Mirn29b|Mirn29b-1|mir-29b-1","microRNA 29b-1","ncRNA"]
[1654,"chr2",168912942,168913322,"+",0,"NA","Intergenic","Intergenic",42455,"NM_009564",22722,"Mm.2095","NM_009564","ENSMUSG00000027551","Zfp64","-","zinc finger protein 64","protein-coding"]
[968,"chr15",61911068,61912970,"+",0,"NA","Intergenic","Intergenic",-73322,"NM_001177354",17869,"Mm.2444","NM_010849","ENSMUSG00000022346","Myc","AU016757|Myc2|Niard|Nird|bHLHe39","myelocytomatosis oncogene","protein-coding"]
[675,"chr13",5443644,5445826,"+",0,"NA","Intergenic","Intergenic",413357,"NR_045891",71867,"Mm.179181","NR_045891","ENSMUSG00000100625","1700016G22Rik","-","RIKEN cDNA 1700016G22 gene","ncRNA"]
[15,"chr1",36915598,36915730,"+",0,"NA","intron (NM_018872, intron 1 of 40)","intron (NM_018872, intron 1 of 40)",23863,"NM_018872",56030,"Mm.186943","NM_018872","ENSMUSG00000026116","Tmem131","2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257","transmembrane protein 131","protein-coding"]
[431,"chr11",79871572,79872214,"+",0,"NA","Intergenic","Intergenic",90494,"NM_144826",216987,"Mm.274961","NM_144826","ENSMUSG00000035575","Utp6","4732497O03Rik|HCA66","UTP6, small subunit (SSU) processome component, homolog (yeast)","protein-coding"]
[382,"chr11",53308721,53309044,"+",0,"NA","Intergenic","Intergenic",-8403,"NM_008300",15525,"Mm.239865","NM_008300","ENSMUSG00000020361","Hspa4","70kDa|AI317151|APG-2|Hsp110|Hsp70RY|mKIAA4025","heat shock protein 4","protein-coding"]
[2236,"chr6",134403601,134403745,"+",0,"NA","intron (NM_025778, intron 2 of 6)","intron (NM_025778, intron 2 of 6)",7344,"NM_025778",66813,"Mm.474472","NM_025778","ENSMUSG00000030200","Bcl2l14","4930452K23Rik|4933405K19Rik|9030625M01Rik|AI429211|Bclg","BCL2-like 14 (apoptosis facilitator)","protein-coding"]
[1506,"chr2",35444841,35445256,"+",0,"NA","intron (NM_001308299, intron 1 of 7)","intron (NM_001308299, intron 1 of 7)",16401,"NM_001308299",14594,"Mm.281124","NM_010283","ENSMUSG00000035778","Ggta1","AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT","glycoprotein galactosyltransferase alpha 1, 3","protein-coding"]
[139,"chr1",135906313,135908119,"+",0,"NA","intron (NM_001313701, intron 2 of 13)","intron (NM_001313701, intron 2 of 13)",11991,"NM_001313701",18772,"Mm.4494","NM_019645","ENSMUSG00000026413","Pkp1","-","plakophilin 1","protein-coding"]
[129,"chr1",135812094,135812222,"+",0,"NA","Intergenic","Intergenic",-6440,"NM_133664",16763,"Mm.36726","NM_133664","ENSMUSG00000041782","Lad1","-","ladinin","protein-coding"]
[926,"chr15",28159199,28159324,"+",0,"NA","Intergenic","Intergenic",-44505,"NM_133365",110082,"Mm.248464","NM_133365","ENSMUSG00000022262","Dnah5","AU022615|Dnahc5|Mdnah5|b2b1134Clo|b2b1154Clo|b2b1537Clo|b2b1565Clo|b2b601Clo|mKIAA1603","dynein, axonemal, heavy chain 5","protein-coding"]
[2145,"chr6",42419803,42419938,"+",0,"NA","Intergenic","Intergenic",14341,"NM_199159",387512,"Mm.377919","NM_199159","ENSMUSG00000056203","Tas2r135","Tas2r35|mt2r38","taste receptor, type 2, member 135","protein-coding"]
[1246,"chr17",83879317,83880113,"+",0,"NA","Intergenic","MLT1H1|LTR|ERVL-MaLR",-32925,"NM_025325",107766,"Mm.30100","NM_025325","ENSMUSG00000000673","Haao","0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO","3-hydroxyanthranilate 3,4-dioxygenase","protein-coding"]
[859,"chr14",64077089,64077267,"+",0,"NA","exon (NM_001081063, exon 4 of 5)","exon (NM_001081063, exon 4 of 5)",8211,"NM_001081063",71037,"Mm.19977","NM_001081063","ENSMUSG00000034623","Prss55","4933401F05Rik","protease, serine 55","protein-coding"]
[1083,"chr16",26385937,26386351,"+",0,"NA","Intergenic","Intergenic",-14305,"NM_016674",12737,"Mm.289441","NM_016674","ENSMUSG00000022512","Cldn1","AI596271","claudin 1","protein-coding"]
[739,"chr13",49401393,49401828,"+",0,"NA","Intergenic","MTE2b|LTR|ERVL-MaLR",-19613,"NR_075085",75678,"Mm.390586","NM_199056","ENSMUSG00000021385","Ippk","1810043M15Rik|InsP6","inositol 1,3,4,5,6-pentakisphosphate 2-kinase","protein-coding"]
[1293,"chr18",35022181,35022401,"+",0,"NA","Intergenic","Intergenic",-67940,"NM_010481",15526,"Mm.209419","NM_010481","ENSMUSG00000024359","Hspa9","74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74","heat shock protein 9","protein-coding"]
[876,"chr14",76630434,76630590,"+",0,"NA","Intergenic","Intergenic",-47056,"NR_015485",73272,"Mm.116804","NR_015485","ENSMUSG00000101009","1700108F19Rik","1700020I02Rik|BB065030","RIKEN cDNA 1700108F19 gene","ncRNA"]
[1792,"chr3",127861039,127861807,"+",0,"NA","Intergenic","Intergenic",-23931,"NM_145964",211556,"Mm.403486","NM_145964","ENSMUSG00000074238","Ap1ar","AA407621|C78909|Gadkin","adaptor-related protein complex 1 associated regulatory protein","protein-coding"]
[662,"chr12",112132495,112134245,"+",0,"NA","Intergenic","MER81|DNA|hAT-Blackjack",2490,"NR_029590",387199,null,"NR_029590","ENSMUSG00000065574","Mir203","Mirn203|mir-203|mmu-mir-203","microRNA 203","ncRNA"]
[168,"chr1",162388348,162388666,"+",0,"NA","intron (NM_172646, intron 2 of 19)","L1ME1|LINE|L1",89523,"NM_001038619",103967,"Mm.441620","NM_172646","ENSMUSG00000040265","Dnm3","9630020E24Rik|AW061159|B230343F03Rik|C530045C17|mKIAA0820","dynamin 3","protein-coding"]
[135,"chr1",135888008,135888706,"+",0,"NA","intron (NM_001313701, intron 3 of 13)","intron (NM_001313701, intron 3 of 13)",30850,"NM_001313701",18772,"Mm.4494","NM_019645","ENSMUSG00000026413","Pkp1","-","plakophilin 1","protein-coding"]
[1518,"chr2",58484140,58486977,"+",0,"NA","intron (NM_001110205, intron 3 of 10)","intron (NM_001110205, intron 3 of 10)",81270,"NM_001110205",11477,"Mm.689","NM_007394","ENSMUSG00000026836","Acvr1","ALK2|ActR-I|ActRIA|Acvr|Acvrlk2|Alk-2|Alk8|D330013D15Rik|SKR1|Tsk7L","activin A receptor, type 1","protein-coding"]
[145,"chr1",138571679,138571868,"+",0,"NA","intron (NM_001311148, intron 1 of 7)","L1MC4|LINE|L1",47984,"NM_021605",59125,"Mm.143817","NM_021605","ENSMUSG00000026393","Nek7","2810460C19Rik|AU020186","NIMA (never in mitosis gene a)-related expressed kinase 7","protein-coding"]
[178,"chr1",172314476,172314586,"+",0,"NA","intron (NM_080419, intron 1 of 6)","intron (NM_080419, intron 1 of 6)",2164,"NM_080419",140559,"Mm.271717","NM_080419","ENSMUSG00000038034","Igsf8","ESTM34|EWI-2|KCT-4|PGRL","immunoglobulin superfamily, member 8","protein-coding"]
[2674,"chr9",99163828,99164576,"+",0,"NA","Intergenic","Intergenic",-23991,"NM_029094",74769,"Mm.213128","NM_029094",null,"Pik3cb","1110001J02Rik|AI447572|p110beta","phosphatidylinositol 3-kinase, catalytic, beta polypeptide","protein-coding"]
[1131,"chr16",78264760,78266534,"+",0,"NA","Intergenic","Intergenic",-10193,"NR_045698",100503619,"Mm.387531","NR_045698",null,"E330011O21Rik","-","RIKEN cDNA E330011O21 gene","ncRNA"]
[2728,"chr9",123482974,123483470,"+",0,"NA","intron (NM_013860, intron 1 of 7)","intron (NM_013860, intron 1 of 7)",4521,"NM_013860",29806,"Mm.10987","NM_013860","ENSMUSG00000025239","Limd1","AW822033|D9Ertd192e","LIM domains containing 1","protein-coding"]
[1876,"chr4",86714525,86715029,"+",0,"NA","Intergenic","ORR1B2|LTR|ERVL-MaLR",-33778,"NM_184088",329877,"Mm.273718","NM_184088","ENSMUSG00000038024","Dennd4c","1700065A05Rik|AA420392","DENN/MADD domain containing 4C","protein-coding"]
[124,"chr1",134513819,134514444,"+",0,"NA","Intergenic","Intergenic",19471,"NM_145510",98710,"Mm.198119","NM_145510",null,"Rabif","AI842864|AW549708|E130318E12Rik|MSS4|RASGFR3","RAB interacting factor","protein-coding"]
[772,"chr13",74301468,74301587,"+",0,"NA","Intergenic","Intergenic",-9218,"NM_009644",11624,"Mm.290446","NM_009644","ENSMUSG00000021575","Ahrr","mKIAA1234","aryl-hydrocarbon receptor repressor","protein-coding"]
[1759,"chr3",101047453,101049630,"+",0,"NA","intron (NM_011197, intron 7 of 8)","intron (NM_011197, intron 7 of 8)",-19046,"NM_001167906",630146,"Mm.190915","NM_001099332","ENSMUSG00000086564","Cd101","EWI-101|Gm1016|Gm734|Igsf2","CD101 antigen","protein-coding"]
[1429,"chr19",55218678,55220901,"+",0,"NA","intron (NM_001081076, intron 12 of 20)","intron (NM_001081076, intron 12 of 20)",21447,"NM_001081076",73707,"Mm.489987","NM_001081076","ENSMUSG00000055523","Gucy2g","2410077I05Rik|GC-G","guanylate cyclase 2g","protein-coding"]
[1974,"chr4",150112061,150112354,"+",0,"NA","Intergenic","Intergenic",-7137,"NM_019741",56485,"Mm.260220","NM_019741","ENSMUSG00000028976","Slc2a5","AI526984|Glut5|Slc5a","solute carrier family 2 (facilitated glucose transporter), member 5","protein-coding"]
[2032,"chr5",64751102,64752144,"+",0,"NA","Intergenic","Intergenic",-51900,"NM_008453",16599,"Mm.392759","NM_008453","ENSMUSG00000029178","Klf3","9930027G08Rik|AL024007|Bklf|Tef-2","Kruppel-like factor 3 (basic)","protein-coding"]
[2536,"chr8",126908309,126909355,"+",0,"NA","Intergenic","Intergenic",37089,"NM_024214",67952,"Mm.6932","NM_024214","ENSMUSG00000093904","Tomm20","1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016","translocase of outer mitochondrial membrane 20 homolog (yeast)","protein-coding"]
[2483,"chr8",94183640,94184410,"+",0,"NA","Intergenic","RLTR28|LTR|ERVL",4936,"NM_013602",17748,"Mm.192991","NM_013602","ENSMUSG00000031765","Mt1","MT-I|Mt-1","metallothionein 1","protein-coding"]
[1374,"chr19",9101353,9101672,"+",0,"NA","Intergenic","Intergenic",-13556,"NM_011681",22287,"Mm.2258","NM_011681","ENSMUSG00000024653","Scgb1a1","CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg","secretoglobin, family 1A, member 1 (uteroglobin)","protein-coding"]
[1528,"chr2",60877789,60878244,"+",0,"NA","intron (NM_020296, intron 1 of 13)","intron (NM_020296, intron 1 of 13)",3422,"NM_001141932",56878,"Mm.259667","NM_020296","ENSMUSG00000026970","Rbms1","2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1","RNA binding motif, single stranded interacting protein 1","protein-coding"]
[2303,"chr7",66376227,66377147,"+",0,"NA","intron (NM_146191, intron 2 of 33)","intron (NM_146191, intron 2 of 33)",5037,"NR_106024",102465640,null,"NR_106024","ENSMUSG00000098353","Mir7057","Gm27550|mmu-mir-7057","microRNA 7057","ncRNA"]
[653,"chr12",104186040,104186196,"+",0,"NA","Intergenic","Intergenic",-28426,"NM_001168294",238393,"Mm.483584","NM_001033335","ENSMUSG00000066363","Serpina3f","2A1|BC049975","serine (or cysteine) peptidase inhibitor, clade A, member 3F","protein-coding"]
[1692,"chr3",55118934,55120640,"+",0,"NA","intron (NM_144895, intron 2 of 8)","intron (NM_144895, intron 2 of 8)",7621,"NM_001144987",229285,"Mm.235523","NM_144895","ENSMUSG00000036580","Spg20","AI840044|C79168|SPARTIN|TAHCCP1|mKIAA0610","spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)","protein-coding"]
[2677,"chr9",100462007,100462149,"+",0,"NA","intron (NM_001033543, intron 5 of 6)","intron (NM_001033543, intron 5 of 6)",24395,"NM_001033543",213208,"Mm.242896","NM_001033543","ENSMUSG00000044244","Il20rb","AV228068|Fndc6|Gm186|Il20R2","interleukin 20 receptor beta","protein-coding"]
[2259,"chr7",18151941,18152335,"+",0,"NA","Intergenic","(CA)n|Simple_repeat|Simple_repeat",-24356,"NM_001003393",232925,"Mm.37237","NM_001003393","ENSMUSG00000066756","Igfl3","Gm580|Igfl|Rprc483","IGF-like family member 3","protein-coding"]
[509,"chr11",109698662,109698797,"+",0,"NA","intron (NM_153782, intron 1 of 10)","intron (NM_153782, intron 1 of 10)",23527,"NM_153782",208659,"Mm.208662","NM_153782","ENSMUSG00000020614","Fam20a","AI606893","family with sequence similarity 20, member A","protein-coding"]
[2212,"chr6",120641540,120642867,"+",0,"NA","Intergenic","Intergenic",-24218,"NM_001128151",330409,"Mm.333357","NM_001128151","ENSMUSG00000071226","Cecr2","2610101O16Rik|2810409N01Rik|Gtl4|mKIAA1740","cat eye syndrome chromosome region, candidate 2","protein-coding"]
[1015,"chr15",97882682,97883925,"+",0,"NA","intron (NM_009504, intron 3 of 9)","intron (NM_009504, intron 3 of 9)",24993,"NM_009504",22337,"Mm.245084","NM_009504","ENSMUSG00000022479","Vdr","Nr1i1","vitamin D receptor","protein-coding"]
[367,"chr11",35416289,35416973,"+",0,"NA","intron (NM_011412, intron 4 of 35)","intron (NM_011412, intron 4 of 35)",-200185,"NR_029799",723924,null,"NR_029799","ENSMUSG00000065583","Mir218-2","Mirn218-2|mir-218-2","microRNA 218-2","ncRNA"]
[976,"chr15",74783875,74786318,"+",0,"NA","Intergenic","Intergenic",-6237,"NR_027837",78725,"Mm.171357","NM_172433","ENSMUSG00000101026","D730001G18Rik","-","RIKEN cDNA D730001G18 gene","ncRNA"]
[716,"chr13",39897937,39899312,"+",0,"NA","Intergenic","Intergenic",389387,"NM_172143",218165,"Mm.364096","NM_172143","ENSMUSG00000047094","Ofcc1","opo","orofacial cleft 1 candidate 1","protein-coding"]
[1886,"chr4",102511239,102512544,"+",0,"NA","intron (NM_019840, intron 5 of 14)","intron (NM_019840, intron 5 of 14)",-58169,"NM_001177980",18578,"Mm.20181","NM_019840","ENSMUSG00000028525","Pde4b","Dpde4|R74983|dunce","phosphodiesterase 4B, cAMP specific","protein-coding"]
[1821,"chr4",8962098,8963727,"+",0,"NA","Intergenic","HAL1|LINE|L1",272506,"NM_001277149",320790,"Mm.138792","NM_001033395","ENSMUSG00000041235","Chd7","A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis","chromodomain helicase DNA binding protein 7","protein-coding"]
[1972,"chr4",149571503,149571753,"+",0,"NA","Intergenic","Intergenic",-14840,"NM_001290989",65945,"Mm.38993","NM_023051","ENSMUSG00000039953","Clstn1","1810034E21Rik|Cst-1|Cstn1","calsyntenin 1","protein-coding"]
[940,"chr15",37192714,37193733,"+",0,"NA","Intergenic","Intergenic",-39813,"NM_026496",252973,"Mm.244612","NM_026496","ENSMUSG00000022286","Grhl2","0610015A08Rik|BOM|Tcfcp2l3","grainyhead-like 2 (Drosophila)","protein-coding"]
[685,"chr13",12486091,12486235,"+",0,"NA","intron (NM_133643, intron 4 of 5)","intron (NM_133643, intron 4 of 5)",-24425,"NM_001291057",56048,"Mm.474138","NM_018886","ENSMUSG00000057554","Lgals8","1200015E08Rik|AI326142|D13Ertd524e|Lgals-8","lectin, galactose binding, soluble 8","protein-coding"]
[743,"chr13",53717272,53717636,"+",0,"NA","Intergenic","Intergenic",68869,"NR_131010",75252,"Mm.401989","NR_131010",null,"4930555G21Rik","-","RIKEN cDNA 4930555G21 gene","ncRNA"]
[2265,"chr7",24598777,24599023,"+",0,"NA","intron (NM_023154, intron 4 of 7)","intron (NM_023154, intron 4 of 7)",-11259,"NM_001033205",101544,"Mm.20117","NM_001033205","ENSMUSG00000066721","Zfp575","AI326876|Znf575","zinc finger protein 575","protein-coding"]
[21,"chr1",40271480,40272430,"+",0,"NA","intron (NM_001123382, intron 1 of 10)","intron (NM_001123382, intron 1 of 10)",5369,"NM_001123382",16177,"Mm.896","NM_008362","ENSMUSG00000026072","Il1r1","CD121a|CD121b|IL-1R1|IL-iR|Il1r-1","interleukin 1 receptor, type I","protein-coding"]
[523,"chr11",117208641,117208863,"+",0,"NA","intron (NM_001113486, intron 1 of 11)","LTR33A_|LTR|ERVL",9091,"NM_001113486",53860,"Mm.38450","NM_017380","ENSMUSG00000059248","2009-09-01","MSF1|Msf|PNUTL4|Sint1","septin 9","protein-coding"]
[2377,"chr7",128118736,128118983,"+",0,"NA","TTS (NM_008401)","TTS (NM_008401)",-10709,"NM_021334",16411,"Mm.22378","NM_021334","ENSMUSG00000030789","Itgax","AI449405|Cd11c|Cr4|N418","integrin alpha X","protein-coding"]
[2129,"chr6",28867223,28867525,"+",0,"NA","intron (NM_019776, intron 16 of 23)","intron (NM_019776, intron 16 of 23)",-35627,"NM_138682",192198,"Mm.443660","NM_138682","ENSMUSG00000049939","Lrrc4","MBAG1|NGL-2|NLG-2|Nag14","leucine rich repeat containing 4","protein-coding"]
[1460,"chr2",20753596,20753813,"+",0,"NA","intron (NM_178059, intron 7 of 18)","intron (NM_178059, intron 7 of 18)",214017,"NM_001081364",71435,"Mm.28507","NM_001081364","ENSMUSG00000036591","Arhgap21","5530401C11Rik|AA416458|ARHGAP10","Rho GTPase activating protein 21","protein-coding"]
[453,"chr11",95688818,95689536,"+",0,"NA","Intergenic","Intergenic",22220,"NM_008831",18673,"Mm.263862","NM_008831","ENSMUSG00000038845","Phb","Bap32","prohibitin","protein-coding"]
[723,"chr13",40718536,40719956,"+",0,"NA","exon (NM_001122948, exon 6 of 7)","exon (NM_001122948, exon 6 of 7)",-8562,"NR_125899",102633805,null,"NR_125899","ENSMUSG00000097752","Gm26688","Tfap2a-as1","predicted gene, 26688","ncRNA"]
[2500,"chr8",106621339,106624802,"+",0,"NA","intron (NM_009864, intron 2 of 15)","intron (NM_009864, intron 2 of 15)",19720,"NM_009864",12550,"Mm.35605","NM_009864","ENSMUSG00000000303","Cdh1","AA960649|ARC-1|E-cad|Ecad|L-CAM|UVO|Um","cadherin 1","protein-coding"]
[1202,"chr17",33439577,33439797,"+",0,"NA","Intergenic","Intergenic",6788,"NM_183282",69481,"Mm.154333","NM_183282","ENSMUSG00000092519","Actl9","1700029I08Rik|AV259599","actin-like 9","protein-coding"]
[351,"chr11",16829021,16831793,"+",0,"NA","intron (NM_207655, intron 1 of 27)","intron (NM_207655, intron 1 of 27)",78204,"NM_007912",13649,"Mm.8534","NM_007912","ENSMUSG00000020122","Egfr","9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2","epidermal growth factor receptor","protein-coding"]
[1040,"chr16",10366972,10367643,"+",0,"NA","intron (NM_001291001, intron 5 of 6)","intron (NM_001291001, intron 5 of 6)",28141,"NM_001099275",70426,"Mm.142181","NM_001099275","ENSMUSG00000039179","Tekt5","3300001K11Rik","tektin 5","protein-coding"]
[595,"chr12",70907229,70908114,"+",0,"NA","Intergenic","Intergenic",-30186,"NM_019785",56444,"Mm.29317","NM_019785","ENSMUSG00000021076","Actr10","Actr11|Arp11","ARP10 actin-related protein 10","protein-coding"]
[1755,"chr3",98020129,98021725,"+",0,"NA","intron (NM_010928, intron 1 of 33)","intron (NM_010928, intron 1 of 33)",7389,"NM_010928",18129,"Mm.485843","NM_010928","ENSMUSG00000027878","Notch2","AI853703|N2","notch 2","protein-coding"]
[1138,"chr16",87659599,87659846,"+",0,"NA","Intergenic","MTE2b|LTR|ERVL-MaLR",-39232,"NM_007520",12013,"Mm.26147","NM_007520","ENSMUSG00000025612","Bach1","6230421P05Rik|AI323795","BTB and CNC homology 1","protein-coding"]
[488,"chr11",100405515,100407868,"+",0,"NA","Intergenic","Intergenic",8128,"NM_176830",66180,"Mm.4940","NM_176830","ENSMUSG00000006931","P3h4","1110036O03Rik|AI413214|Leprel4|Sc65","prolyl 3-hydroxylase family member 4 (non-enzymatic)","protein-coding"]
[1854,"chr4",56230942,56231322,"+",0,"NA","Intergenic","Intergenic",510293,"NM_025271",11471,"Mm.251434","NM_025271","ENSMUSG00000070980","Actl7b","Tact1","actin-like 7b","protein-coding"]
[1012,"chr15",97836973,97837538,"+",0,"NA","intron (NM_001204275, intron 1 of 24)","intron (NM_001204275, intron 1 of 24)",-5488,"NM_001204276",56233,"Mm.384027","NM_019572","ENSMUSG00000022475","Hdac7","5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062","histone deacetylase 7","protein-coding"]
[1498,"chr2",32900887,32902855,"+",0,"NA","intron (NM_146119, intron 1 of 13)","intron (NM_146119, intron 1 of 13)",25737,"NM_146119",227737,"Mm.301646","NM_146119","ENSMUSG00000026796","Fam129b","9130404D14Rik","family with sequence similarity 129, member B","protein-coding"]
[835,"chr14",34082613,34083053,"+",0,"NA","intron (NM_001251843, intron 1 of 4)","intron (NM_001251843, intron 1 of 4)",-3146,"NM_001281845",11752,"Mm.3267","NM_013473","ENSMUSG00000021950","Anxa8","AI466995|Anx8","annexin A8","protein-coding"]
[2182,"chr6",92464145,92464722,"+",0,"NA","intron (NM_001081146, intron 2 of 8)","intron (NM_001081146, intron 2 of 8)",16959,"NM_001134460",243548,"Mm.248820","NM_001081146","ENSMUSG00000030020","Prickle2","6230400G14Rik|6720451F06Rik|mpk2","prickle homolog 2 (Drosophila)","protein-coding"]
[1267,"chr18",4343119,4343277,"+",0,"NA","intron (NM_007746, intron 2 of 7)","intron (NM_007746, intron 2 of 7)",9755,"NM_007746",26410,"Mm.3275","NM_007746","ENSMUSG00000024235","Map3k8","Cot|Cot/Tpl2|Est|Estf|Tpl-2|Tpl2|c-COT","mitogen-activated protein kinase kinase kinase 8","protein-coding"]
[1032,"chr15",101402509,101402961,"+",0,"NA","Intergenic","CT-rich|Low_complexity|Low_complexity",-9668,"NM_033073",110310,"Mm.486285","NM_033073",null,"Krt7","D15Wsu77e|K7|Krt2-7","keratin 7","protein-coding"]
[113,"chr1",131504729,131505112,"+",0,"NA","intron (NM_001081011, intron 2 of 22)","intron (NM_001081011, intron 2 of 22)",22441,"NM_001081011",14270,"Mm.276259","NM_019520","ENSMUSG00000026425","Srgap2","9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3","SLIT-ROBO Rho GTPase activating protein 2","protein-coding"]
[901,"chr14",106033046,106033156,"+",0,"NA","Intergenic","Intergenic",-73097,"NM_198601",212085,"Mm.78128","NM_198601","ENSMUSG00000022113","Trim52","4921513B05Rik","tripartite motif-containing 52","protein-coding"]
[2191,"chr6",103737604,103737786,"+",0,"NA","Intergenic","Intergenic",226819,"NM_007697",12661,"Mm.251288","NM_007697","ENSMUSG00000030077","Chl1","A530023M13Rik|AI465420|CALL|LICAM2","cell adhesion molecule with homology to L1CAM","protein-coding"]
[152,"chr1",153128830,153131027,"+",0,"NA","intron (NM_008485, intron 20 of 23)","intron (NM_008485, intron 20 of 23)",56519,"NM_008485",16782,"Mm.329272","NM_008485","ENSMUSG00000026479","Lamc2","AA589349","laminin, gamma 2","protein-coding"]
[342,"chr10",128586400,128587426,"+",0,"NA","intron (NM_010153, intron 1 of 27)","intron (NM_010153, intron 1 of 27)",-2416,"NR_105882",102465553,null,"NR_105882","ENSMUSG00000098592","Mir6917","Gm27633|mmu-mir-6917","microRNA 6917","ncRNA"]
[1419,"chr19",45837642,45838384,"+",0,"NA","intron (NM_198296, intron 24 of 25)","intron (NM_198296, intron 24 of 25)",-21950,"NM_145703",80906,"Mm.213204","NM_030716","ENSMUSG00000025221","Kcnip2","KChIP2","Kv channel-interacting protein 2","protein-coding"]
[862,"chr14",67097470,67098177,"+",0,"NA","Intergenic","Intergenic",-25352,"NM_001205188",71978,"Mm.273997","NM_028032","ENSMUSG00000022052","Ppp2r2a","2410004D02Rik|mKIAA1541","protein phosphatase 2, regulatory subunit B, alpha","protein-coding"]
[341,"chr10",128560415,128560742,"+",0,"NA","intron (NM_011119, intron 7 of 11)","intron (NM_011119, intron 7 of 11)",5356,"NM_011119",18813,"Mm.4742","NM_011119","ENSMUSG00000025364","Pa2g4","38kDa|AA672939|Ebp1|Plfap","proliferation-associated 2G4","protein-coding"]
[1056,"chr16",21381863,21381975,"+",0,"NA","Intergenic","Intergenic",-41199,"NM_001285893",209018,"Mm.235683","NM_145948","ENSMUSG00000033653","Vps8","AI315068|AU040738|mKIAA0804","vacuolar protein sorting 8 homolog (S. cerevisiae)","protein-coding"]
[2189,"chr6",103343959,103346133,"+",0,"NA","Intergenic","(CA)n|Simple_repeat|Simple_repeat",-165830,"NM_007697",12661,"Mm.251288","NM_007697","ENSMUSG00000030077","Chl1","A530023M13Rik|AI465420|CALL|LICAM2","cell adhesion molecule with homology to L1CAM","protein-coding"]
[2287,"chr7",30782863,30782973,"+",0,"NA","Intergenic","Intergenic",-4987,"NM_001033131",64661,"Mm.268157","NM_001033131","ENSMUSG00000074199","Krtdap","Kdap|sk221","keratinocyte differentiation associated protein","protein-coding"]
[2540,"chr9",7882092,7882767,"+",0,"NA","Intergenic","Intergenic",-9259,"NM_007464",11796,"Mm.2026","NM_007464","ENSMUSG00000032000","Birc3","AW107670|Api1|Api2|Birc2|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF49|cIAP-1|cIAP-2|cIAP1|cIAP2","baculoviral IAP repeat-containing 3","protein-coding"]
[2284,"chr7",28970294,28971023,"+",0,"NA","TTS (NM_028659)","TTS (NM_028659)",-8378,"NM_021895",60595,"Mm.81144","NM_021895","ENSMUSG00000054808","Actn4","C77391","actinin alpha 4","protein-coding"]
[64,"chr1",83138123,83138678,"+",0,"NA","Intergenic","Intergenic",-21362,"NR_027636",71227,"Mm.256482","NM_027725","ENSMUSG00000053161","Daw1","4930563E19Rik|4933429D11Rik|Wdr69|b2b1116Clo|b2b1584Clo","dynein assembly factor with WDR repeat domains 1","protein-coding"]
[1473,"chr2",25549157,25550142,"+",0,"NA","Intergenic","Intergenic",-2709,"NM_009422",22030,"Mm.3399","NM_009422","ENSMUSG00000026942","Traf2","AI325259","TNF receptor-associated factor 2","protein-coding"]
[881,"chr14",99583236,99583440,"+",0,"NA","Intergenic","Intergenic",284647,"NM_009769",12224,"Mm.30262","NM_009769","ENSMUSG00000005148","Klf5","4930520J07Rik|Bteb2|CKLF|IKLF","Kruppel-like factor 5","protein-coding"]
[2461,"chr8",80857047,80857189,"+",0,"NA","intron (NM_001301298, intron 1 of 10)","intron (NM_001301298, intron 1 of 10)",23361,"NM_021356",14388,"Mm.277409","NM_021356","ENSMUSG00000031714","Gab1","AA408973|AW107238","growth factor receptor bound protein 2-associated protein 1","protein-coding"]
[45,"chr1",69655197,69655332,"+",0,"NA","intron (NM_011770, intron 3 of 7)","intron (NM_011770, intron 3 of 7)",30696,"NM_011770",22779,"Mm.106343","NM_011770","ENSMUSG00000025997","Ikzf2","A730095J18Rik|Helios|Zfpn1a2|Znfn1a2","IKAROS family zinc finger 2","protein-coding"]
[405,"chr11",67558475,67559628,"+",0,"NA","intron (NM_008088, intron 1 of 13)","intron (NM_008088, intron 1 of 13)",26053,"NM_008088",14457,"Mm.40338","NM_008088","ENSMUSG00000033066","Gas7","AW124766|B230343A10Rik|Gas7-cb","growth arrest specific 7","protein-coding"]
[507,"chr11",107012355,107012583,"+",0,"NA","Intergenic","Intergenic",-12944,"NM_010655",16647,"Mm.12508","NM_010655","ENSMUSG00000018362","Kpna2","2410044B12Rik|IPOA1|PTAC58|Rch1","karyopherin (importin) alpha 2","protein-coding"]
[1173,"chr17",17826617,17827450,"+",0,"NA","Intergenic","(CGGGG)n|Simple_repeat|Simple_repeat",-3155,"NR_029536",387230,null,"NR_029536","ENSMUSG00000065396","Mir99b","Mirn99b|mmu-mir-99b","microRNA 99b","ncRNA"]
[1963,"chr4",148775296,148775430,"+",0,"NA","Intergenic","Intergenic",-29029,"NM_001159344",69743,"Mm.233879","NM_027195","ENSMUSG00000028977","Casz1","2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e","castor zinc finger 1","protein-coding"]
[309,"chr10",96337635,96338469,"+",0,"NA","Intergenic","Intergenic",111845,"NR_110448",74881,"Mm.410819","NR_110448",null,"4930459C07Rik","-","RIKEN cDNA 4930459C07 gene","ncRNA"]
[1734,"chr3",93506638,93508666,"+",0,"NA","Intergenic","PB1D10|SINE|Alu",-12844,"NM_016740",20195,"Mm.280038","NM_016740","ENSMUSG00000027907","S100a11","EMAPI|Emap1|S100a14|S100c|cal","S100 calcium binding protein A11","protein-coding"]
[2085,"chr5",123970564,123970782,"+",0,"NA","TTS (NM_001134767)","TTS (NM_001134767)",-2955,"NM_145070",29816,"Mm.149954","NM_145070",null,"Hip1r","AA410023|mKIAA0655","huntingtin interacting protein 1 related","protein-coding"]
[1733,"chr3",93128360,93129157,"+",0,"NA","Intergenic","Intergenic",-16029,"NM_001081200",381457,"Mm.458570","NM_001081200","ENSMUSG00000078657","Crnn","Gm1015","cornulin","protein-coding"]
[2113,"chr6",5295428,5295601,"+",0,"NA","intron (NM_183308, intron 1 of 8)","intron (NM_183308, intron 1 of 8)",2859,"NM_183308",330260,"Mm.126984","NM_183308",null,"Pon2","6330405I24Rik|AI481612","paraoxonase 2","protein-coding"]
[2153,"chr6",53643317,53643547,"+",0,"NA","intron (NM_172728, intron 3 of 6)","intron (NM_172728, intron 3 of 6)",70058,"NM_172728",231991,"Mm.321138","NM_172728","ENSMUSG00000053007","Creb5","Crebpa|D430026C09Rik","cAMP responsive element binding protein 5","protein-coding"]
[1258,"chr17",86038211,86038597,"+",0,"NA","intron (NM_030133, intron 16 of 20)","intron (NM_030133, intron 16 of 20)",106771,"NM_030133",78586,"Mm.146236","NM_030133","ENSMUSG00000024135","Srbd1","AI461933|C85414|D530025C17Rik","S1 RNA binding domain 1","protein-coding"]
[824,"chr14",20804341,20807035,"+",0,"NA","Intergenic","Intergenic",-11600,"NM_178597",12325,"Mm.235182","NM_178597","ENSMUSG00000021820","Camk2g","Camkg","calcium/calmodulin-dependent protein kinase II gamma","protein-coding"]
[120,"chr1",134092293,134093983,"+",0,"NA","Intergenic","CpG",-13983,"NM_007570",12227,"Mm.392646","NM_007570","ENSMUSG00000020423","Btg2","AA959598|APRO1|Pc3|TIS21","B cell translocation gene 2, anti-proliferative","protein-coding"]
[2568,"chr9",43130914,43131025,"+",0,"NA","intron (NM_011139, intron 10 of 12)","B3A|SINE|B2",-14399,"NM_001034863",235300,"Mm.261326","NM_001034863","ENSMUSG00000048503","Tmem136","AA396355|Gm184","transmembrane protein 136","protein-coding"]
[1148,"chr16",95709339,95709451,"+",0,"NA","intron (NM_011809, intron 2 of 9)","intron (NM_011809, intron 2 of 9)",6988,"NM_011809",23872,"Mm.290207","NM_011809","ENSMUSG00000022895","Ets2","AU022856|Ets-2","E26 avian leukemia oncogene 2, 3' domain","protein-coding"]
[2386,"chr7",130980627,130980858,"+",0,"NA","intron (NM_019564, intron 5 of 8)","intron (NM_019564, intron 5 of 8)",44539,"NM_019564",56213,"Mm.30156","NM_019564","ENSMUSG00000006205","Htra1","AI429470|HTRA|L56|Prss11|RSPP11","HtrA serine peptidase 1","protein-coding"]
[2313,"chr7",73398637,73398926,"+",0,"NA","intron (NM_177740, intron 2 of 3)","intron (NM_177740, intron 2 of 3)",-23007,"NR_040324",319783,"Mm.349813","NR_040324","ENSMUSG00000097756","A730056A06Rik","C76391","RIKEN cDNA A730056A06 gene","ncRNA"]
[254,"chr10",44427484,44427874,"+",0,"NA","Intergenic","Intergenic",31069,"NM_007548",12142,"Mm.4800","NM_007548","ENSMUSG00000038151","Prdm1","Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo","PR domain containing 1, with ZNF domain","protein-coding"]
[392,"chr11",60356430,60357013,"+",0,"NA","intron (NM_029044, intron 2 of 13)","(CAGT)n|Simple_repeat|Simple_repeat",3341,"NM_029044",74665,"Mm.133570","NM_029044","ENSMUSG00000056598","Lrrc48","4930449E07Rik","leucine rich repeat containing 48","protein-coding"]
[1321,"chr18",61618333,61619536,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-20719,"NR_045420",545261,"Mm.426593","NR_045420","ENSMUSG00000098098","Bvht","Braveheart|Gm20748","braveheart long non-coding RNA","ncRNA"]
[2242,"chr6",136466397,136467023,"+",0,"NA","Intergenic","Intergenic",-51141,"NM_001201390",100502936,"Mm.21182","NM_001201390","ENSMUSG00000045291","E330021D16Rik","C85549","RIKEN cDNA E330021D16 gene","protein-coding"]
[2442,"chr8",61342622,61342865,"+",0,"NA","intron (NM_021506, intron 4 of 11)","intron (NM_021506, intron 4 of 11)",-53871,"NR_045475",69279,"Mm.417857","NR_045475","ENSMUSG00000099419","1700001D01Rik","-","RIKEN cDNA 1700001D01 gene","ncRNA"]
[2254,"chr7",12908348,12908478,"+",0,"NA","3' UTR (NM_001290442, exon 2 of 2)","3' UTR (NM_001290442, exon 2 of 2)",10604,"NM_001290441",232878,"Mm.40706","NM_001001447","ENSMUSG00000054715","Zscan22","AW227621|D530006B18Rik|Hkr2","zinc finger and SCAN domain containing 22","protein-coding"]
[1987,"chr5",20747462,20748791,"+",0,"NA","Intergenic","Intergenic",133998,"NM_172992",68770,"Mm.86410","NM_172992","ENSMUSG00000039987","Phtf2","1110054G21Rik|9530062N20Rik|AI447096|C77923","putative homeodomain transcription factor 2","protein-coding"]
[813,"chr13",114636161,114636283,"+",0,"NA","intron (NR_045976, intron 3 of 6)","intron (NR_045976, intron 3 of 6)",28994,"NR_045976",75161,"Mm.50406","NM_175218","ENSMUSG00000051758","4930544M13Rik","-","RIKEN cDNA 4930544M13 gene","ncRNA"]
[2014,"chr5",43947658,43947949,"+",0,"NA","Intergenic","Intergenic",33996,"NM_008009",14181,"Mm.46053","NM_008009","ENSMUSG00000048373","Fgfbp1","FGF-BP|FGF-BP1|FGFBP-1","fibroblast growth factor binding protein 1","protein-coding"]
[2602,"chr9",62816871,62818224,"+",0,"NA","Intergenic","MIRb|SINE|MIR",-5899,"NM_010193",14155,"Mm.24069","NM_010193","ENSMUSG00000032244","Fem1b","mKIAA0396","feminization 1 homolog b (C. elegans)","protein-coding"]
[644,"chr12",90921126,90921720,"+",0,"NA","Intergenic","Intergenic",-124425,"NR_045858",71349,"Mm.442093","NR_045858",null,"5430427M07Rik","-","RIKEN cDNA 5430427M07 gene","ncRNA"]
[2477,"chr8",91529355,91529731,"+",0,"NA","intron (NM_011936, intron 8 of 8)","intron (NM_011936, intron 8 of 8)",216018,"NM_011936",26383,"Mm.4375","NM_011936","ENSMUSG00000055932","Fto","AW743446|mKIAA1752","fat mass and obesity associated","protein-coding"]
[851,"chr14",60894999,60896284,"+",0,"NA","intron (NR_040642, intron 18 of 19)","intron (NR_040642, intron 18 of 19)",111075,"NR_040642",70478,"Mm.274650","NM_027436","ENSMUSG00000021993","Mipep","5730405E07Rik|MIP","mitochondrial intermediate peptidase","protein-coding"]
[1820,"chr4",8928312,8930984,"+",0,"NA","Intergenic","Intergenic",239242,"NM_001277149",320790,"Mm.138792","NM_001033395","ENSMUSG00000041235","Chd7","A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis","chromodomain helicase DNA binding protein 7","protein-coding"]
[399,"chr11",61646491,61648388,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-5882,"NM_027817",71520,"Mm.202760","NM_027817","ENSMUSG00000004837","Grap","8430435N19Rik|BB233594","GRB2-related adaptor protein","protein-coding"]
[2296,"chr7",45475223,45475401,"+",0,"NA","exon (NM_027903, exon 7 of 7)","exon (NM_027903, exon 7 of 7)",-8414,"NM_007527",12028,"Mm.19904","NM_007527","ENSMUSG00000003873","Bax","-","BCL2-associated X protein","protein-coding"]
[2110,"chr5",149390000,149390288,"+",0,"NA","Intergenic","Intergenic",-21662,"NM_027519",70717,"Mm.252139","NM_027519","ENSMUSG00000029659","Medag","6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3","mesenteric estrogen dependent adipogenesis","protein-coding"]
[1811,"chr3",148427637,148430062,"+",0,"NA","Intergenic","Intergenic",525786,"NM_001081298",99633,"Mm.9776","NM_001081298","ENSMUSG00000028184","Adgrl2","AI450192|CIRL-2|Gm619|Lec1|Lphh1|Lphn2|mKIAA0786","adhesion G protein-coupled receptor L2","protein-coding"]
[436,"chr11",86581148,86581679,"+",0,"NA","Intergenic","Intergenic",2745,"NR_029738",387140,null,"NR_029738","ENSMUSG00000065455","Mir21a","Mir21|Mirn21|mmu-mir-21|mmu-mir-21a","microRNA 21a","ncRNA"]
[1342,"chr18",73543457,73544237,"+",0,"NA","Intergenic","Lx8|LINE|L1",-28858,"NM_001039214",240396,"Mm.24131","NM_001039214","ENSMUSG00000037253","Mex3c","A130001D14Rik|BC035207|BM-013|Rkhd2","mex3 homolog C (C. elegans)","protein-coding"]
[2457,"chr8",79501507,79501993,"+",0,"NA","Intergenic","B1_Mur1|SINE|Alu",-102282,"NM_008539",17125,"Mm.223717","NM_008539","ENSMUSG00000031681","Smad1","AI528653|Madh1|Madr1|Mlp1|MusMLP","SMAD family member 1","protein-coding"]
[1968,"chr4",148901269,148902893,"+",0,"NA","intron (NM_001159344, intron 4 of 20)","intron (NM_001159344, intron 4 of 20)",97689,"NM_027195",69743,"Mm.233879","NM_027195","ENSMUSG00000028977","Casz1","2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e","castor zinc finger 1","protein-coding"]
[1802,"chr3",135740503,135741074,"+",0,"NA","Intergenic","Intergenic",-49241,"NM_008689",18033,"Mm.256765","NM_008689","ENSMUSG00000028163","Nfkb1","NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105","nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105","protein-coding"]
[94,"chr1",118407751,118407883,"+",0,"NA","intron (NM_001293300, intron 1 of 40)","intron (NM_001293300, intron 1 of 40)",18759,"NM_001293301",76707,"Mm.138740","NM_029709","ENSMUSG00000064302","Clasp1","1700030C23Rik|5730583A19Rik|B130045P17Rik|CLASP1alpha","CLIP associating protein 1","protein-coding"]
[213,"chr1",194675213,194675672,"+",0,"NA","intron (NM_008882, intron 3 of 31)","intron (NM_008882, intron 3 of 31)",55613,"NM_008882",18845,"Mm.2251","NM_008882","ENSMUSG00000026640","Plxna2","2810428A13Rik|AA589422|AW457381|OCT|PlexA2|Plxn2|mKIAA0463","plexin A2","protein-coding"]
[1450,"chr2",9802582,9804244,"+",0,"NA","Intergenic","B3A|SINE|B2",75187,"NM_008091",14462,"Mm.313866","NM_008091","ENSMUSG00000015619","Gata3","Gata-3|jal","GATA binding protein 3","protein-coding"]
[2668,"chr9",96134152,96135877,"+",0,"NA","intron (NM_177352, intron 3 of 16)","intron (NM_177352, intron 3 of 16)",15585,"NM_177352",235533,"Mm.213651","NM_177352","ENSMUSG00000041440","Gk5","AV095337|C330018K18Rik|G630067D24Rik","glycerol kinase 5 (putative)","protein-coding"]
[568,"chr12",55464171,55466848,"+",0,"NA","intron (NR_035430, intron 1 of 3)","intron (NR_035430, intron 1 of 3)",27138,"NM_010907",18035,"Mm.170515","NM_010907","ENSMUSG00000021025","Nfkbia","AI462015|Nfkbi","nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha","protein-coding"]
[2273,"chr7",27507901,27508031,"+",0,"NA","exon (NM_019412, exon 5 of 6)","exon (NM_019412, exon 5 of 6)",8642,"NM_019412",19153,"Mm.10119","NM_019412","ENSMUSG00000053198","Prx","L-Periaxin","periaxin","protein-coding"]
[2411,"chr8",19163174,19164954,"+",0,"NA","Intergenic","Intergenic",6177,"NM_153115",78128,"Mm.229357","NM_153115","ENSMUSG00000079842","Spag11a","9230111C08Rik|Bin1b|EP2Q|EP2e|Spag11","sperm associated antigen 11A","protein-coding"]
[1129,"chr16",78248449,78249309,"+",0,"NA","Intergenic","Intergenic",6575,"NR_045698",100503619,"Mm.387531","NR_045698",null,"E330011O21Rik","-","RIKEN cDNA E330011O21 gene","ncRNA"]
[791,"chr13",98013236,98013770,"+",0,"NA","intron (NM_012026, intron 9 of 35)","intron (NM_012026, intron 9 of 35)",192662,"NM_012026",110596,"Mm.252718","NM_012026","ENSMUSG00000021662","Arhgef28","9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF","Rho guanine nucleotide exchange factor (GEF) 28","protein-coding"]
[1143,"chr16",90181286,90181710,"+",0,"NA","Intergenic","Intergenic",-39244,"NM_011434",20655,"Mm.276325","NM_011434","ENSMUSG00000022982","Sod1","B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1","superoxide dismutase 1, soluble","protein-coding"]
[1355,"chr19",4429899,4430746,"+",0,"NA","intron (NM_007485, intron 3 of 4)","intron (NM_007485, intron 3 of 4)",-9001,"NR_045990",319314,"Mm.393810","NR_045989","ENSMUSG00000087132","A930001C03Rik","-","RIKEN cDNA A930001C03 gene","ncRNA"]
[2231,"chr6",129008741,129009220,"+",0,"NA","Intergenic","RLTR34B_MM|LTR|ERVK",-5132,"NM_001277202",435921,"Mm.489572","NM_001277202",null,"Clec2f","Clec2f-ps|Clr-c|Clrc|Clrz","C-type lectin domain family 2, member f","protein-coding"]
[1961,"chr4",148713878,148714753,"+",0,"NA","Intergenic","Intergenic",70998,"NM_001085505",230909,"Mm.332067","NM_001085505","ENSMUSG00000070577","Gm572","b2b1167Clo","predicted gene 572","protein-coding"]
[386,"chr11",55365070,55365238,"+",0,"NA","Intergenic","Intergenic",-52897,"NM_001029988",245827,"Mm.339363","NM_001029988","ENSMUSG00000055333","Fat2","EMI2|Fath2|Gm523|mKIAA0811","FAT tumor suppressor homolog 2 (Drosophila)","protein-coding"]
[916,"chr15",5458018,5459122,"+",0,"NA","Intergenic","Intergenic",-37748,"NR_045274",71432,"Mm.291087","NR_045274",null,"5430437J10Rik","-","RIKEN cDNA 5430437J10 gene","ncRNA"]
[2043,"chr5",77178499,77178822,"+",0,"NA","Intergenic","Intergenic",32545,"NM_001289767",69982,"Mm.46106","NM_183284","ENSMUSG00000053030","Spink2","1700007F22Rik|AV038945|HUSI-II","serine peptidase inhibitor, Kazal type 2","protein-coding"]
[1457,"chr2",19580418,19580862,"+",0,"NA","Intergenic","Intergenic",-26730,"NM_027600",70909,"Mm.158488","NM_027600","ENSMUSG00000026734","4921504E06Rik","4921522E24Rik","RIKEN cDNA 4921504E06 gene","protein-coding"]
[200,"chr1",189814587,189814895,"+",0,"NA","intron (NM_008976, intron 3 of 18)","intron (NM_008976, intron 3 of 18)",86473,"NM_008976",19250,"Mm.4498","NM_008976","ENSMUSG00000026604","Ptpn14","C130080N23Rik|OTTMUSG00000022087|PTP36","protein tyrosine phosphatase, non-receptor type 14","protein-coding"]
[1261,"chr17",87612908,87614060,"+",0,"NA","Intergenic","Intergenic",-22495,"NM_008532",17075,"Mm.4259","NM_008532","ENSMUSG00000045394","Epcam","CD326|EGP|EGP-2|Egp314|Ep-CAM|EpCAM1|GA733-2|Ly74|TROP1|Tacsd1|Tacstd1|gp40","epithelial cell adhesion molecule","protein-coding"]
[1352,"chr19",4134756,4135410,"+",0,"NA","TTS (NM_144532)","TTS (NM_144532)",4526,"NM_144532",73660,"Mm.379226","NM_144532","ENSMUSG00000024842","Cabp4","2410038D05Rik","calcium binding protein 4","protein-coding"]
[329,"chr10",116732846,116733561,"+",0,"NA","intron (NR_131036, intron 2 of 2)","intron (NR_131036, intron 2 of 2)",3950,"NR_131036",75878,"Mm.370607","NR_131036",null,"4930579P08Rik","-","RIKEN cDNA 4930579P08 gene","ncRNA"]
[525,"chr11",117843936,117845055,"+",0,"NA","Intergenic","Intergenic",-4742,"NM_001012273",11799,"Mm.8552","NM_009689","ENSMUSG00000017716","Birc5","AAC-11|Api4|TIAP|survivin40","baculoviral IAP repeat-containing 5","protein-coding"]
[1621,"chr2",150839340,150841987,"+",0,"NA","intron (NM_024465, intron 6 of 12)","intron (NM_024465, intron 6 of 12)",53867,"NM_153781",110078,"Mm.222584","NM_153781","ENSMUSG00000033059","Pygb","-","brain glycogen phosphorylase","protein-coding"]
[27,"chr1",51508346,51510242,"+",0,"NA","Intergenic","Intergenic",-30895,"NM_001310549",109019,"Mm.196290","NM_028696","ENSMUSG00000026107","Nabp1","4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2","nucleic acid binding protein 1","protein-coding"]
[787,"chr13",92676207,92677040,"+",0,"NA","intron (NM_172588, intron 2 of 11)","intron (NM_172588, intron 2 of 11)",65485,"NM_172588",218442,"Mm.297970","NM_172588","ENSMUSG00000021703","Serinc5","A130038L21Rik|AIGP3|C86123|TPO1","serine incorporator 5","protein-coding"]
[2331,"chr7",80785626,80787450,"+",0,"NA","intron (NM_016721, intron 2 of 37)","intron (NM_016721, intron 2 of 37)",16793,"NM_016721",29875,"Mm.207619","NM_016721","ENSMUSG00000030536","Iqgap1","AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051","IQ motif containing GTPase activating protein 1","protein-coding"]
[1902,"chr4",118993369,118993484,"+",0,"NA","Intergenic","Intergenic",31459,"NM_133892",100470,"Mm.26698","NM_133892","ENSMUSG00000024903","Lao1","AW990848","L-amino acid oxidase 1","protein-coding"]
[1561,"chr2",92430959,92431071,"+",0,"NA","intron (NM_009963, intron 1 of 11)","intron (NM_009963, intron 1 of 11)",3054,"NM_009963",12953,"Mm.254181","NM_009963","ENSMUSG00000068742","Cry2","AV006279|D130054K12Rik","cryptochrome 2 (photolyase-like)","protein-coding"]
[161,"chr1",156994602,156994951,"+",0,"NA","Intergenic","Intergenic",-55150,"NM_023884",78255,"Mm.28376","NM_023884","ENSMUSG00000026594","Ralgps2","1810020P17Rik|2210408F11Rik|4921528G01Rik|9130014M22Rik|AU043409|AW046161","Ral GEF with PH domain and SH3 binding motif 2","protein-coding"]
[1866,"chr4",59174548,59174682,"+",0,"NA","Intergenic","Intergenic",-14935,"NM_011673",22234,"Mm.198803","NM_011673","ENSMUSG00000028381","Ugcg","AU043821|C80537|Epcs21|GlcT-1|Ugcgl","UDP-glucose ceramide glucosyltransferase","protein-coding"]
[2001,"chr5",32426079,32426453,"+",0,"NA","Intergenic","Intergenic",-32704,"NM_172707",19046,"Mm.241931","NM_172707",null,"Ppp1cb","1200010B19","protein phosphatase 1, catalytic subunit, beta isoform","protein-coding"]
[1310,"chr18",44638614,44639562,"+",0,"NA","intron (NM_001085373, intron 3 of 18)","B3|SINE|B2",-22577,"NR_026853",626275,"Mm.427116","NR_026853","ENSMUSG00000097610","A930012L18Rik","-","RIKEN cDNA A930012L18 gene","ncRNA"]
[109,"chr1",130766020,130766606,"+",0,"NA","Intergenic","Intergenic",34337,"NM_177604",212439,"Mm.268547","NM_177604","ENSMUSG00000042510","AA986860","E030025M07|Sarg","expressed sequence AA986860","protein-coding"]
[2115,"chr6",5305737,5305888,"+",0,"NA","Intergenic","Intergenic",-7439,"NM_183308",330260,"Mm.126984","NM_183308",null,"Pon2","6330405I24Rik|AI481612","paraoxonase 2","protein-coding"]
[2318,"chr7",73616271,73618122,"+",0,"NA","Intergenic","Intergenic",-58801,"NR_037569",69170,"Mm.34539","NR_037569","ENSMUSG00000098496","1810026B05Rik","-","RIKEN cDNA 1810026B05 gene","ncRNA"]
[2651,"chr9",78605986,78606590,"+",0,"NA","Intergenic","Intergenic",-9258,"NM_153098",235505,"Mm.32955","NM_153098","ENSMUSG00000046186","Cd109","9930012E15Rik|AI480638|GARP","CD109 antigen","protein-coding"]
[1239,"chr17",72827978,72829038,"+",0,"NA","Intergenic","Intergenic",-8196,"NM_027166",383295,"Mm.277533","NM_027166","ENSMUSG00000039770","Ypel5","2310076K21Rik|CGI-127","yippee-like 5 (Drosophila)","protein-coding"]
[769,"chr13",72198674,72198823,"+",0,"NA","Intergenic","Intergenic",-235025,"NM_010573",16371,"Mm.316056","NM_010573","ENSMUSG00000060969","Irx1","-","Iroquois related homeobox 1 (Drosophila)","protein-coding"]
[1556,"chr2",85512364,85512499,"+",0,"NA","intron (NM_001081664, intron 1 of 11)","intron (NM_001081664, intron 1 of 11)",6504,"NM_001081664",228151,"Mm.17636","NM_001081664",null,"4833423E24Rik","Fads2p1|Gm113","RIKEN cDNA 4833423E24 gene","protein-coding"]
[1181,"chr17",26483488,26486064,"+",0,"NA","Intergenic","L1MB8|LINE|L1",23696,"NM_013642",19252,"Mm.239041","NM_013642","ENSMUSG00000024190","Dusp1","3CH134|MKP1|Ptpn16|U19515|erp|mkp-1","dual specificity phosphatase 1","protein-coding"]
[1809,"chr3",148418616,148419961,"+",0,"NA","Intergenic","Intergenic",535347,"NM_001081298",99633,"Mm.9776","NM_001081298","ENSMUSG00000028184","Adgrl2","AI450192|CIRL-2|Gm619|Lec1|Lphh1|Lphn2|mKIAA0786","adhesion G protein-coupled receptor L2","protein-coding"]
[803,"chr13",109279120,109279365,"+",0,"NA","intron (NM_011056, intron 3 of 16)","intron (NM_011056, intron 3 of 16)",-45502,"NR_030644",100124489,null,"NR_030644","ENSMUSG00000076946","Mir582","Mirn582|mir-582|mmu-mir-582","microRNA 582","ncRNA"]
[2559,"chr9",32730943,32731061,"+",0,"NA","intron (NM_011808, intron 3 of 7)","intron (NM_011808, intron 3 of 7)",34960,"NM_001038642",23871,"Mm.292415","NM_011808","ENSMUSG00000032035","Ets1","AI196000|AI448617|D230050P06|Ets-1|Tpl1","E26 avian leukemia oncogene 1, 5' domain","protein-coding"]
[1766,"chr3",103100609,103100744,"+",0,"NA","TTS (NM_001033303)","TTS (NM_001033303)",26662,"NM_001033303",229665,"Mm.331272","NM_001033303","ENSMUSG00000070385","Ampd1","AI553520|Ampd-1","adenosine monophosphate deaminase 1","protein-coding"]
[60,"chr1",77460358,77460692,"+",0,"NA","intron (NM_007936, intron 3 of 17)","intron (NM_007936, intron 3 of 17)",36243,"NR_105770",102465180,null,"NR_105770","ENSMUSG00000099141","Mir6352","Gm27481|mmu-mir-6352","microRNA 6352","ncRNA"]
[1245,"chr17",83180994,83181636,"+",0,"NA","Intergenic","Intergenic",-33968,"NM_134117",106522,"Mm.311974","NM_134117","ENSMUSG00000024247","Pkdcc","AI115348|AW548124|Adtk1|ESTM17|MAd1|Sgk493|Vlk|X83346","protein kinase domain containing, cytoplasmic","protein-coding"]
[1400,"chr19",32271007,32272972,"+",0,"NA","intron (NM_001168525, intron 2 of 9)","intron (NM_001168525, intron 2 of 9)",-60976,"NM_001168526",208449,"Mm.329810","NM_144792","ENSMUSG00000040451","Sgms1","9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23","sphingomyelin synthase 1","protein-coding"]
[1067,"chr16",24364649,24365318,"+",0,"NA","Intergenic","Intergenic",-28367,"NM_178665",210126,"Mm.209385","NM_178665","ENSMUSG00000033306","Lpp","9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16","LIM domain containing preferred translocation partner in lipoma","protein-coding"]
[691,"chr13",30641948,30643857,"+",0,"NA","Intergenic","B2_Mm2|SINE|B2",-17157,"NM_001037955",105352,"Mm.289646","NM_134068","ENSMUSG00000069255","Dusp22","JKAP|JSP1|LMW-DSP2|MKPX","dual specificity phosphatase 22","protein-coding"]
[2615,"chr9",69303812,69304341,"+",0,"NA","intron (NM_001289916, intron 1 of 9)","Charlie1a|DNA|hAT-Charlie",14235,"NM_001289916",19883,"Mm.378450","NM_013646","ENSMUSG00000032238","Rora","9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26","RAR-related orphan receptor alpha","protein-coding"]
[1676,"chr3",35693473,35693675,"+",0,"NA","Intergenic","Intergenic",-27411,"NR_040748",625963,"Mm.251506","NR_040748","ENSMUSG00000105662","Gm6639","-","predicted gene 6639","ncRNA"]
[1388,"chr19",24166180,24167501,"+",0,"NA","intron (NM_011597, intron 1 of 22)","intron (NM_011597, intron 1 of 22)",7300,"NM_001198985",21873,"Mm.104744","NM_011597","ENSMUSG00000024812","Tjp2","ZO-2","tight junction protein 2","protein-coding"]
[346,"chr11",6388775,6388904,"+",0,"NA","Intergenic","Intergenic",-6286,"NM_001005867",52915,"Mm.1144","NM_028601","ENSMUSG00000041164","Zmiz2","Zimp7","zinc finger, MIZ-type containing 2","protein-coding"]
[911,"chr14",120312048,120314135,"+",0,"NA","intron (NM_175341, intron 1 of 8)","intron (NM_175341, intron 1 of 8)",37422,"NM_175341",105559,"Mm.238266","NM_175341","ENSMUSG00000022139","Mbnl2","1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072","muscleblind-like 2","protein-coding"]
[427,"chr11",76822987,76823656,"+",0,"NA","intron (NM_007754, intron 2 of 20)","intron (NM_007754, intron 2 of 20)",23687,"NM_007754",12874,"Mm.276736","NM_007754","ENSMUSG00000020841","Cpd","AA960140|AW322530|D830034L15Rik","carboxypeptidase D","protein-coding"]
[2072,"chr5",120513628,120513757,"+",0,"NA","intron (NM_133221, intron 2 of 15)","L2a|LINE|L2",2500,"NM_001177594",170756,"Mm.291070","NM_133221","ENSMUSG00000032754","Slc8b1","AF261233|NCKX6|NCLX|Slc24a6","solute carrier family 8 (sodium/lithium/calcium exchanger), member B1","protein-coding"]
[82,"chr1",93706020,93706633,"+",0,"NA","intron (NM_001310761, intron 4 of 4)","intron (NM_001310761, intron 4 of 4)",20751,"NM_016778",51800,"Mm.3295","NM_016778","ENSMUSG00000026278","Bok","matador|mtd","BCL2-related ovarian killer","protein-coding"]
[2202,"chr6",114881076,114881186,"+",0,"NA","intron (NM_177683, intron 2 of 4)","intron (NM_177683, intron 2 of 4)",40621,"NM_177683",232334,"Mm.268357","NM_177683",null,"Vgll4","BC048841|VGL-4","vestigial like 4 (Drosophila)","protein-coding"]
[650,"chr12",100982060,100982230,"+",0,"NA","intron (NM_026681, intron 4 of 29)","intron (NM_026681, intron 4 of 29)",39623,"NR_035421",100316805,null,"NR_035421","ENSMUSG00000080575","Mir1190","Mirn1190|mmu-mir-1190","microRNA 1190","ncRNA"]
[1154,"chr16",97740541,97740938,"+",0,"NA","Intergenic","Intergenic",23016,"NM_023663",72388,"Mm.35290","NM_023663","ENSMUSG00000005251","Ripk4","2310069J12Rik|AI552420|ANKK2|Ankrd3|DIk|PKK|RIP4","receptor-interacting serine-threonine kinase 4","protein-coding"]
[2624,"chr9",70275057,70275973,"+",0,"NA","intron (NM_181072, intron 1 of 27)","intron (NM_181072, intron 1 of 27)",68165,"NM_181072",71602,"Mm.249311","NM_181072","ENSMUSG00000032220","Myo1e","2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3","myosin IE","protein-coding"]
[895,"chr14",103499949,103500915,"+",0,"NA","Intergenic","Intergenic",-12909,"NM_022886",64929,"Mm.244003","NM_022886","ENSMUSG00000022123","Scel","9230114I02Rik","sciellin","protein-coding"]
[1763,"chr3",102041407,102042364,"+",0,"NA","Intergenic","MTD|LTR|ERVL-MaLR",31740,"NM_178777",18072,"Mm.137286","NM_178777","ENSMUSG00000048540","Nhlh2","6230401I09Rik|Hen2|NSCL2|Nscl-2|bHLHa34","nescient helix loop helix 2","protein-coding"]
[69,"chr1",86449928,86450379,"+",0,"NA","Intergenic","Intergenic",23824,"NM_027966",71863,"Mm.179627","NM_027966","ENSMUSG00000036574","1700019O17Rik","-","RIKEN cDNA 1700019O17 gene","protein-coding"]
[1910,"chr4",124120144,124120863,"+",0,"NA","Intergenic","RSINE1|SINE|B4",203070,"NM_017475",54170,"Mm.220922","NM_017475","ENSMUSG00000028646","Rragc","AU041672|Gtr2|RAGC|TIB929|YGR163W","Ras-related GTP binding C","protein-coding"]
[1157,"chr17",4833686,4833902,"+",0,"NA","Intergenic","Intergenic",-161280,"NM_001085355",239985,"Mm.133401","NM_001085355","ENSMUSG00000069729","Arid1b","8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235","AT rich interactive domain 1B (SWI-like)","protein-coding"]
[1470,"chr2",25228058,25228381,"+",0,"NA","TTS (NM_080854)","TTS (NM_080854)",-3517,"NM_146116",227613,"Mm.227260","NM_146116","ENSMUSG00000036752","Tubb4b","4930542G03Rik|Tubb2c|Tubb2c1","tubulin, beta 4B class IVB","protein-coding"]
[224,"chr10",17752807,17753799,"+",0,"NA","Intergenic","Intergenic",30075,"NM_010828",17684,"Mm.272321","NM_010828","ENSMUSG00000039910","Cited2","AI835299|ER154-like|Mrg1|Msg2|p35srj","Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2","protein-coding"]
[2711,"chr9",119329582,119330605,"+",0,"NA","Intergenic","ERV3-16A3_I-int|LTR|ERVL",-7666,"NM_133985",108737,"Mm.293565","NM_133985","ENSMUSG00000036737","Oxsr1","2210022N24Rik|2810422B09Rik|AI462649|AW209236|Osr1|mKIAA1101","oxidative-stress responsive 1","protein-coding"]
[2100,"chr5",139820350,139820482,"+",0,"NA","Intergenic","Intergenic",-6133,"NM_001161548",231832,"Mm.482655","NM_144914","ENSMUSG00000036687","Tmem184a","Sdmg1","transmembrane protein 184a","protein-coding"]
[1982,"chr4",155173055,155173394,"+",0,"NA","intron (NM_011385, intron 1 of 6)","intron (NM_011385, intron 1 of 6)",49311,"NM_011385",20481,"Mm.28520","NM_011385","ENSMUSG00000029050","Ski","2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088","ski sarcoma viral oncogene homolog (avian)","protein-coding"]
[1006,"chr15",96830166,96830586,"+",0,"NA","Intergenic","Intergenic",-130678,"NM_175121",67760,"Mm.46754","NM_175121","ENSMUSG00000022462","Slc38a2","5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382","solute carrier family 38, member 2","protein-coding"]
[2393,"chr7",140837592,140837767,"+",0,"NA","non-coding (NR_045717, exon 4 of 4)","non-coding (NR_045717, exon 4 of 4)",2183,"NM_029821",76974,"Mm.272359","NM_029821","ENSMUSG00000025481","Urah","1190003J15Rik|2810420C16Rik","urate (5-hydroxyiso-) hydrolase","protein-coding"]
[426,"chr11",76208718,76209267,"+",0,"NA","TTS (NM_027773)","TTS (NM_027773)",6936,"NM_027773",116972,"Mm.188413","NM_027773",null,"Fam57a","2310047D13Rik|4932415L08Rik|5430402E13Rik|5430420K21Rik|Wdt3","family with sequence similarity 57, member A","protein-coding"]
[996,"chr15",85667559,85667940,"+",0,"NA","Intergenic","Intergenic",-36024,"NR_110483",102800312,"Mm.33117","NR_110483",null,"Lincppara","Mirlet7bhg|linc-Ppara","long intergenic noncoding RNA near Ppara","ncRNA"]
[1435,"chr19",57181207,57184081,"+",0,"NA","intron (NM_001290813, intron 1 of 20)","intron (NM_001290813, intron 1 of 20)",14987,"NM_001103177",226251,"Mm.217161","NM_178688","ENSMUSG00000025085","Ablim1","2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059","actin-binding LIM protein 1","protein-coding"]
[1840,"chr4",41051082,41051233,"+",0,"NA","Intergenic","B1_Mur4|SINE|Alu",-3021,"NM_007473",11832,"Mm.8728","NM_007473","ENSMUSG00000028427","Aqp7","AQP7L|AQPap","aquaporin 7","protein-coding"]
[279,"chr10",69185020,69186308,"+",0,"NA","Intergenic","B3|SINE|B2",-22888,"NM_001252636",69288,"Mm.26659","NM_001081347","ENSMUSG00000019944","Rhobtb1","1700008H16Rik|3110048G13Rik|AI173445|AI573858|AV350930","Rho-related BTB domain containing 1","protein-coding"]
[2408,"chr8",18918711,18919463,"+",0,"NA","Intergenic","Intergenic",31784,"NM_001286469",319581,"Mm.111354","NM_176951","ENSMUSG00000039814","Xkr5","5430438H03Rik|XRG5","X Kell blood group precursor-related family, member 5","protein-coding"]
[2069,"chr5",118355378,118356089,"+",0,"NA","Intergenic","Intergenic",110506,"NM_001081236",76792,"Mm.103428","NM_001081236",null,"2410131K14Rik","-","RIKEN cDNA 2410131K14 gene","protein-coding"]
[956,"chr15",59447671,59449112,"+",0,"NA","intron (NM_026746, intron 3 of 6)","intron (NM_026746, intron 3 of 6)",74193,"NM_001164604",68501,"Mm.27762","NM_026746","ENSMUSG00000059586","Nsmce2","1110014D18Rik|AI661537","non-SMC element 2 homolog (MMS21, S. cerevisiae)","protein-coding"]
[483,"chr11",99468906,99469263,"+",0,"NA","Intergenic","Intergenic",24026,"NM_033373",94179,"Mm.290657","NM_033373","ENSMUSG00000006777","Krt23","CK23|Haik1|K23|Krt1-23","keratin 23","protein-coding"]
[498,"chr11",103377865,103379031,"+",0,"NA","intron (NM_183034, intron 6 of 11)","intron (NM_183034, intron 6 of 11)",-14756,"NM_001205236",544817,"Mm.259113","NM_133715","ENSMUSG00000034255","Arhgap27","2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20","Rho GTPase activating protein 27","protein-coding"]
[629,"chr12",82420168,82420722,"+",0,"NA","intron (NM_172579, intron 11 of 20)","intron (NM_172579, intron 11 of 20)",109096,"NM_172579",217692,"Mm.261333","NM_172579","ENSMUSG00000042700","Sipa1l1","4931426N11Rik|AW213287|Spar|mKIAA0440","signal-induced proliferation-associated 1 like 1","protein-coding"]
[2055,"chr5",103463980,103465645,"+",0,"NA","intron (NM_011204, intron 2 of 47)","intron (NM_011204, intron 2 of 47)",39620,"NM_011204",19249,"Mm.3414","NM_011204","ENSMUSG00000034573","Ptpn13","AI324989|PTP-BL|PTPL1|Ptpri|RIP","protein tyrosine phosphatase, non-receptor type 13","protein-coding"]
[1487,"chr2",32427248,32428287,"+",0,"NA","intron (NM_001164357, intron 1 of 9)","intron (NM_001164357, intron 1 of 9)",3384,"NM_001164358",227731,"Mm.37395","NM_146118","ENSMUSG00000026819","Slc25a25","1110030N17Rik|MCSC|mKIAA1896","solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25","protein-coding"]
[372,"chr11",46176309,46177705,"+",0,"NA","Intergenic","Intergenic",6920,"NR_106098",102465715,null,"NR_106098","ENSMUSG00000099331","Mir7239","Gm27504|mmu-mir-7239","microRNA 7239","ncRNA"]
[2028,"chr5",64626175,64626285,"+",0,"NA","Intergenic","Intergenic",-15531,"NR_045078",100042198,"Mm.25191","NR_045078","ENSMUSG00000105402","Gm3716","Gm1683","predicted gene 3716","ncRNA"]
[1540,"chr2",73335854,73337222,"+",0,"NA","3' UTR (NM_029022, exon 8 of 8)","3' UTR (NM_029022, exon 8 of 8)",23886,"NM_029022",74616,"Mm.247457","NM_029022","ENSMUSG00000008226","Scrn3","4833415E20Rik|AI427019|AV002033|Ses3","secernin 3","protein-coding"]
[1661,"chr2",170209525,170210210,"+",0,"NA","Intergenic","Intergenic",-67192,"NM_001159683",228913,"Mm.22858","NM_001033299","ENSMUSG00000052056","Zfp217","4933431C08Rik|AW987152|Gm562|ZABC1|Znf217","zinc finger protein 217","protein-coding"]
[1330,"chr18",65050181,65053566,"+",0,"NA","intron (NM_031881, intron 1 of 29)","intron (NM_031881, intron 1 of 29)",28346,"NM_031881",83814,"Mm.98668","NM_031881","ENSMUSG00000024589","Nedd4l","1300012C07Rik|Nedd4-2|Nedd4b","neural precursor cell expressed, developmentally down-regulated gene 4-like","protein-coding"]
[1284,"chr18",20490007,20490647,"+",0,"NA","Intergenic","B1_Mur2|SINE|Alu",-19977,"NM_030596",13512,"Mm.106811","NM_030596","ENSMUSG00000056632","Dsg3","bal|balding","desmoglein 3","protein-coding"]
[1606,"chr2",140557442,140558748,"+",0,"NA","intron (NM_001013802, intron 3 of 18)","MLT1J1|LTR|ERVL-MaLR",113381,"NM_001172160",71436,"Mm.426781","NM_178382","ENSMUSG00000051379","Flrt3","5530600M07Rik|C430047I10Rik|mKIAA1469","fibronectin leucine rich transmembrane protein 3","protein-coding"]
[2064,"chr5",115071961,115072900,"+",0,"NA","intron (NM_029012, intron 2 of 10)","intron (NM_029012, intron 2 of 10)",35532,"NM_001271591",100502825,"Mm.361657","NM_001271590",null,"Rpl37rt","Gm13826|OTTMUSG00000014624","ribosomal protein L37, retrotransposed","protein-coding"]
[1160,"chr17",4997021,4997282,"+",0,"NA","intron (NM_001085355, intron 1 of 19)","intron (NM_001085355, intron 1 of 19)",2077,"NM_001085355",239985,"Mm.133401","NM_001085355","ENSMUSG00000069729","Arid1b","8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235","AT rich interactive domain 1B (SWI-like)","protein-coding"]
[99,"chr1",125449683,125451392,"+",0,"NA","Intergenic","Intergenic",-14810,"NM_001205386",74117,"Mm.183102","NM_023735","ENSMUSG00000026341","Actr3","1200003A09Rik|Arp3","ARP3 actin-related protein 3","protein-coding"]
[869,"chr14",73444679,73445895,"+",0,"NA","Intergenic","Intergenic",-60016,"NM_008410",16432,"Mm.4266","NM_008410","ENSMUSG00000022108","Itm2b","AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2","integral membrane protein 2B","protein-coding"]
[1592,"chr2",131902371,131903632,"+",0,"NA","Intergenic","Intergenic",-6927,"NM_011170",19122,"Mm.648","NM_011170","ENSMUSG00000079037","Prnp","AA960666|AI325101|CD230|PrP|PrP<C>|PrPC|PrPSc|Prn-i|Prn-p|Sinc|prP27-30|prP33-35C","prion protein","protein-coding"]
[1933,"chr4",132873929,132874582,"+",0,"NA","intron (NM_133887, intron 1 of 8)","intron (NM_133887, intron 1 of 8)",10203,"NM_133887",100226,"Mm.28237","NM_133887",null,"Stx12","AI850350|AU041521|Stx13","syntaxin 12","protein-coding"]
[2022,"chr5",64065203,64065499,"+",0,"NA","Intergenic","RMER6A|LTR|ERVK",20378,"NR_045384",74757,"Mm.159329","NR_045384","ENSMUSG00000106219","5830416I19Rik","-","RIKEN cDNA 5830416I19 gene","ncRNA"]
[790,"chr13",97248862,97249161,"+",0,"NA","intron (NM_007930, intron 2 of 2)","intron (NM_007930, intron 2 of 2)",7906,"NM_007930",13803,"Mm.241073","NM_007930","ENSMUSG00000041773","Enc1","Nrpb|PIG10","ectodermal-neural cortex 1","protein-coding"]
[533,"chr11",121544318,121545296,"+",0,"NA","intron (NM_029878, intron 14 of 38)","intron (NM_029878, intron 14 of 38)",-25465,"NM_178763",319530,"Mm.11395","NM_178763","ENSMUSG00000039238","Zfp750","A030007D23Rik|Znf750","zinc finger protein 750","protein-coding"]
[2080,"chr5",123670090,123670243,"+",0,"NA","intron (NM_019765, intron 1 of 23)","PB1D10|SINE|Alu",14195,"NM_019765",56430,"Mm.241109","NM_019765","ENSMUSG00000049550","Clip1","1110007I12Rik|4631429H07Rik|AV017631|C81039|CLIP-170|CLIP170|CYLN1|Clip50|Rsn|mKIAA4046|restin","CAP-GLY domain containing linker protein 1","protein-coding"]
[1122,"chr16",65559511,65560086,"+",0,"NA","intron (NM_026879, intron 1 of 5)","intron (NM_026879, intron 1 of 5)",2899,"NM_026879",68942,"Mm.432944","NM_026879","ENSMUSG00000004843","Chmp2b","1190006E07Rik","charged multivesicular body protein 2B","protein-coding"]
[2416,"chr8",23485119,23485297,"+",0,"NA","Intergenic","Intergenic",73706,"NM_013834",20377,"Mm.281691","NM_013834","ENSMUSG00000031548","Sfrp1","2210415K03Rik|AW011917|AW107218|AW742929|sFRP-1","secreted frizzled-related protein 1","protein-coding"]
[1697,"chr3",59312418,59312538,"+",0,"NA","intron (NM_177855, intron 42 of 43)","intron (NM_177855, intron 42 of 43)",31778,"NM_001162884",242050,"Mm.228086","NM_001162884","ENSMUSG00000036334","Igsf10","6530405F15Rik|9030224D03|AA409708|AA536958|AI414626|Adlican2|CMF608","immunoglobulin superfamily, member 10","protein-coding"]
[1053,"chr16",20975079,20975322,"+",0,"NA","Intergenic","Intergenic",178744,"NM_025634",66561,"Mm.422867","NM_025634","ENSMUSG00000090356","Teddm3","2310042E22Rik","transmembrane epididymal family member 3","protein-coding"]
[414,"chr11",70468442,70470012,"+",0,"NA","Intergenic","ORR1F|LTR|ERVL-MaLR",-9243,"NM_023158",66102,"Mm.425692","NM_023158","ENSMUSG00000018920","Cxcl16","0910001K24Rik|AV290116|BB024863|CXCL16v1|CXCL16v2|SR-PSOX|Zmynd15|b2b498Clo","chemokine (C-X-C motif) ligand 16","protein-coding"]
[462,"chr11",97308720,97310176,"+",0,"NA","Intergenic","Intergenic",-6268,"NM_025927",67036,"Mm.5381","NM_025927","ENSMUSG00000018882","Mrpl45","2600005P05Rik|AU043542|R75241","mitochondrial ribosomal protein L45","protein-coding"]
[1770,"chr3",105001016,105001509,"+",0,"NA","TTS (NM_030249)","TTS (NM_030249)",-39553,"NM_009520",22414,"Mm.10740","NM_009520","ENSMUSG00000027840","Wnt2b","Wnt13","wingless-type MMTV integration site family, member 2B","protein-coding"]
[1209,"chr17",36001553,36001794,"+",0,"NA","intron (NR_015618, intron 1 of 1)","RMER1C|Other|Other",7169,"NR_015618",77810,"Mm.483143","NR_015618",null,"A930015D03Rik","-","RIKEN cDNA A930015D03 gene","ncRNA"]
[263,"chr10",62299773,62301265,"+",0,"NA","intron (NM_001146100, intron 3 of 17)","intron (NM_001146100, intron 3 of 17)",39902,"NM_001146100",15275,"Mm.196605","NM_010438","ENSMUSG00000037012","Hk1","BB404130|Hk-1|Hk1-s|dea|mHk1-s","hexokinase 1","protein-coding"]
[991,"chr15",83090568,83090837,"+",0,"NA","Intergenic","L2a|LINE|L2",-9503,"NM_023475",68607,"Mm.30056","NM_023475","ENSMUSG00000058586","Serhl","0610008B10Rik|1110019M09Rik|AU019786","serine hydrolase-like","protein-coding"]
[2348,"chr7",100589671,100591688,"+",0,"NA","intron (NR_003559, intron 1 of 7)","RLTR17B_Mm|LTR|ERVK",-7549,"NM_198831",52443,"Mm.473730","NM_198831",null,"Mrpl48","1810030E20Rik|2610028L11Rik|CGI-118|D4Ertd786e","mitochondrial ribosomal protein L48","protein-coding"]
[931,"chr15",36842774,36843748,"+",0,"NA","Intergenic","Intergenic",-46332,"NM_001253806",22631,"Mm.3360","NM_011740","ENSMUSG00000022285","Ywhaz","1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854","tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide","protein-coding"]
[2246,"chr6",136625919,136626626,"+",0,"NA","intron (NM_025806, intron 6 of 10)","RSINE1|SINE|B4",35621,"NM_025806",66857,"Mm.3311","NM_025806","ENSMUSG00000030214","Plbd1","1100001H23Rik","phospholipase B domain containing 1","protein-coding"]
[615,"chr12",79490169,79490279,"+",0,"NA","intron (NM_009014, intron 7 of 10)","intron (NM_009014, intron 7 of 10)",192873,"NM_001252562",19363,"Mm.341756","NM_009014","ENSMUSG00000059060","Rad51b","AI553500|R51H2|Rad51l1|mREC2","RAD51 homolog B","protein-coding"]
[476,"chr11",99081392,99081904,"+",0,"NA","intron (NM_172564, intron 2 of 12)","intron (NM_172564, intron 2 of 12)",7658,"NM_172564",217169,"Mm.262067","NM_172564","ENSMUSG00000017607","Tns4","9930017A07Rik|AA589547|AU016405|Cten","tensin 4","protein-coding"]
[1198,"chr17",31840754,31840935,"+",0,"NA","Intergenic","Intergenic",14948,"NM_010831",17691,"Mm.290941","NM_010831","ENSMUSG00000024042","Sik1","Msk|Sik|Snf1lk","salt inducible kinase 1","protein-coding"]
[1626,"chr2",155294272,155295173,"+",0,"NA","intron (NM_001004721, intron 10 of 11)","intron (NM_001004721, intron 10 of 11)",18358,"NR_046364",66734,"Mm.196239","NM_025735","ENSMUSG00000027602","Map1lc3a","1010001H21Rik|4922501H04Rik|LC3|LC3a","microtubule-associated protein 1 light chain 3 alpha","protein-coding"]
[1409,"chr19",37332844,37333497,"+",0,"NA","Intergenic","Intergenic",-2557,"NM_031156",15925,"Mm.28366","NM_031156","ENSMUSG00000056999","Ide","1300012G03Rik|4833415K22Rik|AA675336|AI507533","insulin degrading enzyme","protein-coding"]
[2219,"chr6",122811185,122811763,"+",0,"NA","Intergenic","CpG",-8710,"NM_021899",60611,"Mm.87142","NM_021899","ENSMUSG00000003154","Foxj2","Fhx","forkhead box J2","protein-coding"]
[2141,"chr6",41557268,41559099,"+",0,"NA","Intergenic","Intergenic",36407,"NM_009430",22072,"Mm.276926","NM_009430","ENSMUSG00000057163","Prss2","TRY8|TRYP|Ta|Tesp4|Try2","protease, serine 2","protein-coding"]
[2464,"chr8",81767934,81768216,"+",0,"NA","intron (NM_001297593, intron 4 of 23)","T-rich|Low_complexity|Low_complexity",425513,"NM_001297593",234515,"Mm.324468","NM_001024617","ENSMUSG00000037940","Inpp4b","E130107I17Rik","inositol polyphosphate-4-phosphatase, type II","protein-coding"]
[1077,"chr16",25910783,25912225,"+",0,"NA","Intergenic","Intergenic",109588,"NM_001127264",22061,"Mm.20894","NM_011641","ENSMUSG00000022510","Trp63","AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1","transformation related protein 63","protein-coding"]
[1716,"chr3",87620753,87622392,"+",0,"NA","intron (NM_001003912, intron 1 of 39)","intron (NM_001003912, intron 1 of 39)",2821,"NM_001003912",213498,"Mm.287267","NM_001003912","ENSMUSG00000041977","Arhgef11","B930073M02|E130307F09|PDZ-RhoGEF|Prg|RhoGEF|mKIAA0380","Rho guanine nucleotide exchange factor (GEF) 11","protein-coding"]
[293,"chr10",80751372,80752069,"+",0,"NA","Intergenic","MLT2D|LTR|ERVL",-3486,"NM_199322",208266,"Mm.152371","NM_199322","ENSMUSG00000061589","Dot1l","A630076O07|AW907654|Dot1|KMT4|mDot1","DOT1-like, histone H3 methyltransferase (S. cerevisiae)","protein-coding"]
[1272,"chr18",6281527,6282972,"+",0,"NA","Intergenic","Intergenic",-40725,"NM_008448",16573,"Mm.223744","NM_008448","ENSMUSG00000006740","Kif5b","AL022807|Khc|Khcs|Kns1|Ukhc","kinesin family member 5B","protein-coding"]
[1781,"chr3",109368318,109369046,"+",0,"NA","intron (NM_020505, intron 1 of 26)","intron (NM_020505, intron 1 of 26)",27999,"NM_020505",57257,"Mm.282257","NM_020505","ENSMUSG00000033721","Vav3","A530094I06Rik|AA986410|Idd18.1","vav 3 oncogene","protein-coding"]
[1299,"chr18",37877584,37880146,"+",0,"NA","intron (NM_001305981, intron 18 of 28)","intron (NM_001305981, intron 18 of 28)",-24205,"NR_105945",102465592,null,"NR_105945","ENSMUSG00000098706","Mir6979","Gm27524|mmu-mir-6979","microRNA 6979","ncRNA"]
[1663,"chr2",170307852,170310246,"+",0,"NA","Intergenic","Intergenic",-47312,"NR_040610",73303,"Mm.443297","NR_040610","ENSMUSG00000086999","Bcas1os2","1700040N02Rik","breast carcinoma amplified sequence 1, opposite strand 2","ncRNA"]
[967,"chr15",61619523,61620085,"+",0,"NA","Intergenic","Intergenic",154647,"NR_040350",432956,"Mm.404918","NR_040350",null,"D030024E09Rik","-","RIKEN cDNA D030024E09 gene","ncRNA"]
[2157,"chr6",54866118,54867863,"+",0,"NA","intron (NM_199143, intron 2 of 4)","intron (NM_199143, intron 2 of 4)",50074,"NM_199143",387524,"Mm.286149","NM_199143",null,"Znrf2","1190002C14Rik|AU044205|D6Ertd365e","zinc and ring finger 2","protein-coding"]
[1611,"chr2",143903167,143904992,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-11252,"NM_019771",56431,"Mm.28919","NM_019771","ENSMUSG00000015932","Dstn","2610043P17Rik|ADF|AU042046|Dsn|corn1|sid23p","destrin","protein-coding"]
[322,"chr10",108308376,108309019,"+",0,"NA","Intergenic","Intergenic",-23492,"NM_054056",114774,"Mm.391419","NM_054056","ENSMUSG00000035873","Pawr","2310001G03Rik|PAR4|Par-4","PRKC, apoptosis, WT1, regulator","protein-coding"]
[469,"chr11",98772358,98773719,"+",0,"NA","intron (NM_145434, intron 1 of 7)","intron (NM_145434, intron 1 of 7)",2339,"NM_145434",217166,"Mm.390397","NM_145434","ENSMUSG00000020889","Nr1d1","A530070C09Rik|R75201","nuclear receptor subfamily 1, group D, member 1","protein-coding"]
[635,"chr12",84614833,84615475,"+",0,"NA","exon (NM_008992, exon 3 of 19)","exon (NM_008992, exon 3 of 19)",2312,"NM_008992",19300,"Mm.229109","NM_008992","ENSMUSG00000021240","Abcd4","P69r|P70R|Pxmp1l","ATP-binding cassette, sub-family D (ALD), member 4","protein-coding"]
[1088,"chr16",28941739,28942465,"+",0,"NA","Intergenic","RLTR24|LTR|ERV1",-12404,"NM_177718",239796,"Mm.155887","NM_177718","ENSMUSG00000051065","Mb21d2","1600021P15Rik|A430031N04|C87006","Mab-21 domain containing 2","protein-coding"]
[575,"chr12",69457846,69458752,"+",0,"NA","Intergenic","Intergenic",17251,"NR_038060",76062,"Mm.380755","NR_038060",null,"5830428M24Rik","100040862|Gm3007","RIKEN cDNA 5830428M24 gene","ncRNA"]
[1835,"chr4",33260976,33261235,"+",0,"NA","Intergenic","GA-rich|Low_complexity|Low_complexity",-12318,"NM_001033225",108767,"Mm.27769","NM_001033225","ENSMUSG00000040128","Pnrc1","5730463C12Rik|B4-2|PRR2|Prol2","proline-rich nuclear receptor coactivator 1","protein-coding"]
[1566,"chr2",102894036,102896262,"+",0,"NA","intron (NM_001039150, intron 1 of 13)","intron (NM_001039150, intron 1 of 13)",6516,"NM_001177785",12505,"Mm.423621","NM_009851","ENSMUSG00000005087","Cd44","AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1","CD44 antigen","protein-coding"]
[979,"chr15",77219936,77220712,"+",0,"NA","intron (NM_175387, intron 2 of 12)","intron (NM_175387, intron 2 of 12)",-66512,"NM_001286418",93686,"Mm.202774","NM_053104","ENSMUSG00000033565","Rbfox2","Fbm2|Fxh|Hrnbp2|Rbm9","RNA binding protein, fox-1 homolog (C. elegans) 2","protein-coding"]
[709,"chr13",38122610,38125350,"+",0,"NA","Intergenic","Intergenic",-27314,"NM_023842",109620,"Mm.355327","NM_023842","ENSMUSG00000054889","Dsp","2300002E22Rik|5730453H04Rik|AA407887|AA407888|AW109828|DP|rul","desmoplakin","protein-coding"]
[40,"chr1",62771923,62772483,"+",0,"NA","intron (NM_001077404, intron 12 of 16)","intron (NM_001077404, intron 12 of 16)",22529,"NR_040601",74992,"Mm.401979","NR_040601",null,"4930487H11Rik","-","RIKEN cDNA 4930487H11 gene","ncRNA"]
[310,"chr10",96619767,96621143,"+",0,"NA","3' UTR (NM_007569, exon 2 of 2)","3' UTR (NM_007569, exon 2 of 2)",3454,"NM_007569",12226,"Mm.23811","NM_007569","ENSMUSG00000036478","Btg1","AI426953|AW546738","B cell translocation gene 1, anti-proliferative","protein-coding"]
[192,"chr1",182067740,182067896,"+",0,"NA","Intergenic","B3|SINE|B2",-47838,"NM_010135",13800,"Mm.87759","NM_008680","ENSMUSG00000022995","Enah","Mena|NDPP-1|Ndpp1|WBP8","enabled homolog (Drosophila)","protein-coding"]
[699,"chr13",37453787,37454538,"+",0,"NA","Intergenic","ORR1E|LTR|ERVL-MaLR",108817,"NM_010745",17084,"Mm.2639","NM_010745","ENSMUSG00000021423","Ly86","MD-1|MD1","lymphocyte antigen 86","protein-coding"]
[1115,"chr16",56868089,56871246,"+",0,"NA","intron (NM_019631, intron 1 of 5)","(GGGA)n|Simple_repeat|Simple_repeat",16496,"NM_019631",56277,"Mm.262328","NM_019631","ENSMUSG00000022754","Tmem45a","C630002M10Rik|M32486|p19.5","transmembrane protein 45a","protein-coding"]
[960,"chr15",59482117,59482290,"+",0,"NA","intron (NM_026746, intron 4 of 6)","intron (NM_026746, intron 4 of 6)",108005,"NM_001164604",68501,"Mm.27762","NM_026746","ENSMUSG00000059586","Nsmce2","1110014D18Rik|AI661537","non-SMC element 2 homolog (MMS21, S. cerevisiae)","protein-coding"]
[818,"chr14",7998040,8000176,"+",0,"NA","Intergenic","Intergenic",-3794,"NM_025341",66082,"Mm.181473","NM_025341","ENSMUSG00000025277","Abhd6","0610041D24Rik|AA673485|AV065425","abhydrolase domain containing 6","protein-coding"]
[2363,"chr7",112720486,112720673,"+",0,"NA","intron (NM_001166584, intron 1 of 13)","intron (NM_001166584, intron 1 of 13)",-38805,"NM_001166585",21676,"Mm.24685","NM_009346","ENSMUSG00000055320","Tead1","2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1","TEA domain family member 1","protein-coding"]
[1038,"chr16",10342015,10342417,"+",0,"NA","Intergenic","B3A|SINE|B2",-10931,"NR_126064",381033,"Mm.263108","NR_126064",null,"Gm1600","Gm1776","predicted gene 1600","ncRNA"]
[2293,"chr7",35127458,35128936,"+",0,"NA","Intergenic","Intergenic",8904,"NM_007678",12606,"Mm.349667","NM_007678","ENSMUSG00000034957","Cebpa","C/ebpalpha|CBF-A|Cebp","CCAAT/enhancer binding protein (C/EBP), alpha","protein-coding"]
[1707,"chr3",84319206,84319346,"+",0,"NA","Intergenic","Intergenic",-14501,"NM_001271726",80890,"Mm.44876","NM_030706","ENSMUSG00000027993","Trim2","mKIAA0517|narf","tripartite motif-containing 2","protein-coding"]
[267,"chr10",67100206,67101273,"+",0,"NA","Intergenic","Intergenic",-3751,"NM_178606",28193,"Mm.41272","NM_178606","ENSMUSG00000019873","Reep3","D10Ucla1","receptor accessory protein 3","protein-coding"]
[543,"chr12",14253585,14254341,"+",0,"NA","Intergenic","Intergenic",-7571,"NR_045003",791361,"Mm.217963","NR_045003",null,"Gm16497","ENSMUSG00000066623","predicted gene 16497","ncRNA"]
[1892,"chr4",109421274,109421536,"+",0,"NA","exon (NM_001145948, exon 3 of 18)","exon (NM_001145948, exon 3 of 18)",5758,"NM_001145948",230603,"Mm.33091","NM_153392","ENSMUSG00000028555","Ttc39a","4922503N01Rik","tetratricopeptide repeat domain 39A","protein-coding"]
[1777,"chr3",108774040,108775159,"+",0,"NA","intron (NM_177859, intron 7 of 11)","B1_Mur3|SINE|Alu",34941,"NM_177859",329738,"Mm.72322","NM_177859","ENSMUSG00000049565","Aknad1","4921525H12Rik","AKNA domain containing 1","protein-coding"]
[2044,"chr5",77200740,77200936,"+",0,"NA","Intergenic","Intergenic",10367,"NM_001289767",69982,"Mm.46106","NM_183284","ENSMUSG00000053030","Spink2","1700007F22Rik|AV038945|HUSI-II","serine peptidase inhibitor, Kazal type 2","protein-coding"]
[354,"chr11",20126602,20126941,"+",0,"NA","Intergenic","Intergenic",-13820,"NM_146243",66713,"Mm.259045","NM_146243","ENSMUSG00000020152","Actr2","4921510D23Rik|AA409782|Arp2|D6Ertd746e","ARP2 actin-related protein 2","protein-coding"]
[1437,"chr19",59844667,59845295,"+",0,"NA","Intergenic","B4|SINE|B4",98383,"NM_001033172",74998,"Mm.24167","NM_001033172","ENSMUSG00000040022","Rab11fip2","4930470G04Rik|A830046J09Rik|AW558126|Nrip11","RAB11 family interacting protein 2 (class I)","protein-coding"]
[1064,"chr16",24146603,24148236,"+",0,"NA","Intergenic","Intergenic",-158807,"NM_009744",12053,"Mm.347398","NM_009744","ENSMUSG00000022508","Bcl6","Bcl5","B cell leukemia/lymphoma 6","protein-coding"]
[2724,"chr9",123136665,123138104,"+",0,"NA","Intergenic","Intergenic",-13562,"NM_011606",21922,"Mm.34588","NM_011606","ENSMUSG00000025784","Clec3b","Tna","C-type lectin domain family 3, member b","protein-coding"]
[2517,"chr8",122904095,122904210,"+",0,"NA","intron (NR_037865, intron 4 of 13)","intron (NR_037865, intron 4 of 13)",55778,"NM_007662",12555,"Mm.1976","NM_007662","ENSMUSG00000031962","Cdh15","AI323380|Cdh14|Mcad","cadherin 15","protein-coding"]
[757,"chr13",63071311,63072142,"+",0,"NA","intron (NM_001289924, intron 5 of 16)","intron (NM_001289924, intron 5 of 16)",106833,"NM_001289924",72061,"Mm.188105","NM_028079","ENSMUSG00000021458","2010111I01Rik","2300006M17Rik|AP-O|Aopep|mir-23b|mir-24-1|mir-27b","RIKEN cDNA 2010111I01 gene","protein-coding"]
[2577,"chr9",43326637,43326992,"+",0,"NA","intron (NM_023655, intron 5 of 8)","intron (NM_023655, intron 5 of 8)",16051,"NM_023655",72169,"Mm.273277","NM_023655","ENSMUSG00000032013","Trim29","1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726","tripartite motif-containing 29","protein-coding"]
[9,"chr1",30789956,30790182,"+",0,"NA","Intergenic","Intergenic",73187,"NM_001081080",213109,"Mm.194486","NM_025871","ENSMUSG00000048874","Phf3","2310061N19Rik|mKIAA0244","PHD finger protein 3","protein-coding"]
[2734,"chrX",75844834,75845876,"+",0,"NA","intron (NM_001166453, intron 1 of 15)","intron (NM_001166453, intron 1 of 15)",-2334,"NM_001166454",102866,"Mm.28777","NM_145629","ENSMUSG00000016382","Pls3","AI115446|AL024105","plastin 3 (T-isoform)","protein-coding"]
[1217,"chr17",42933267,42935678,"+",0,"NA","Intergenic","Intergenic",-58048,"NM_009847",12488,"Mm.218637","NM_009847","ENSMUSG00000061665","Cd2ap","AL024079|C78928|METS-1|Mets1","CD2-associated protein","protein-coding"]
[1740,"chr3",94630296,94631081,"+",0,"NA","intron (NM_011656, intron 6 of 12)","RSINE1|SINE|B4",28184,"NM_001293728",22156,"Mm.10214","NM_011656","ENSMUSG00000005968","Tuft1","-","tuftelin 1","protein-coding"]
[1600,"chr2",137756413,137756595,"+",0,"NA","Intergenic","Intergenic",-500080,"NM_001025431",228662,"Mm.153405","NM_145534","ENSMUSG00000062098","Btbd3","mKIAA0952","BTB (POZ) domain containing 3","protein-coding"]
[603,"chr12",75700606,75700980,"+",0,"NA","Intergenic","(GGAA)n|Simple_repeat|Simple_repeat",-31256,"NM_028203",72338,"Mm.341719","NM_028203","ENSMUSG00000045690","Wdr89","2600001A11Rik","WD repeat domain 89","protein-coding"]
[2527,"chr8",125344268,125344538,"+",0,"NA","Intergenic","Intergenic",148307,"NM_001081337",244668,"Mm.271668","NM_001081337","ENSMUSG00000001995","Sipa1l2","BC058408|mKIAA1389","signal-induced proliferation-associated 1 like 2","protein-coding"]
[90,"chr1",107418491,107420092,"+",0,"NA","Intergenic","Intergenic",-3398,"NM_027548",116872,"Mm.66015","NM_027548","ENSMUSG00000067001","Serpinb7","4631416M05Rik|megsin|ovalbumin","serine (or cysteine) peptidase inhibitor, clade B, member 7","protein-coding"]
[1850,"chr4",55529512,55529622,"+",0,"NA","intron (NM_010637, intron 4 of 4)","intron (NM_010637, intron 4 of 4)",2908,"NM_010637",16600,"Mm.4325","NM_010637","ENSMUSG00000003032","Klf4","EZF|Gklf|Zie","Kruppel-like factor 4 (gut)","protein-coding"]
[565,"chr12",54575486,54576079,"+",0,"NA","Intergenic","Intergenic",70230,"NR_035439",100316682,null,"NR_035439","ENSMUSG00000106344","Mir1892","Mirn1892|mir-1892|mmu-mir-1892","microRNA 1892","ncRNA"]
[1346,"chr18",80169754,80170068,"+",0,"NA","Intergenic","Intergenic",-16328,"NR_131039",105246506,"Mm.392326","NR_131039",null,"LOC105246506","-","uncharacterized LOC105246506","ncRNA"]
[1964,"chr4",148779950,148780701,"+",0,"NA","Intergenic","Intergenic",-24067,"NM_001159344",69743,"Mm.233879","NM_027195","ENSMUSG00000028977","Casz1","2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e","castor zinc finger 1","protein-coding"]
[850,"chr14",60884721,60886522,"+",0,"NA","intron (NR_040642, intron 18 of 19)","intron (NR_040642, intron 18 of 19)",101055,"NR_040642",70478,"Mm.274650","NM_027436","ENSMUSG00000021993","Mipep","5730405E07Rik|MIP","mitochondrial intermediate peptidase","protein-coding"]
[2424,"chr8",24466820,24467721,"+",0,"NA","Intergenic","Intergenic",17716,"NR_035483",100316707,null,"NR_035483","ENSMUSG00000088552","Mir1957a","Mir1957|mmu-mir-1957|mmu-mir-1957a","microRNA 1957a","ncRNA"]
[891,"chr14",101788186,101788390,"+",0,"NA","intron (NM_201529, intron 1 of 30)","intron (NM_201529, intron 1 of 30)",58360,"NM_201529",380928,"Mm.218981","NM_201529","ENSMUSG00000033060","Lmo7","C78582|FBXO20|Gm914|mKIAA0858","LIM domain only 7","protein-coding"]
[1004,"chr15",96755629,96757177,"+",0,"NA","Intergenic","Intergenic",-56705,"NM_175121",67760,"Mm.46754","NM_175121","ENSMUSG00000022462","Slc38a2","5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382","solute carrier family 38, member 2","protein-coding"]
[2106,"chr5",145280790,145280900,"+",0,"NA","Intergenic","CpG",-2498,"NM_001081431",666311,"Mm.260773","NM_001081431","ENSMUSG00000070420","Zscan25","EG666311|Zfp498","zinc finger and SCAN domain containing 25","protein-coding"]
[2696,"chr9",108042876,108043587,"+",0,"NA","intron (NM_013785, intron 4 of 5)","B1_Mm|SINE|Alu",-6059,"NM_177910",331026,"Mm.22554","NM_177910","ENSMUSG00000070284","Gmppb","AI317178|E430010H19","GDP-mannose pyrophosphorylase B","protein-coding"]
[1360,"chr19",5798483,5799023,"+",0,"NA","non-coding (NR_002847, exon 1 of 1)","non-coding (NR_002847, exon 1 of 1)",3918,"NR_002847",72289,"Mm.298256","NR_002847","ENSMUSG00000092341","Malat1","2210401K01Rik|9430072K23Rik|AI647968|Neat2","metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)","ncRNA"]
[233,"chr10",19043330,19044815,"+",0,"NA","Intergenic","RLTR16|LTR|ERVK",-28662,"NM_009397",21929,"Mm.116683","NM_009397","ENSMUSG00000019850","Tnfaip3","A20|Tnfip3","tumor necrosis factor, alpha-induced protein 3","protein-coding"]
[1013,"chr15",97860786,97861038,"+",0,"NA","intron (NM_009504, intron 7 of 9)","intron (NM_009504, intron 7 of 9)",-16410,"NM_001204278",56233,"Mm.384027","NM_019572","ENSMUSG00000022475","Hdac7","5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062","histone deacetylase 7","protein-coding"]
[1490,"chr2",32867264,32868835,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-8085,"NM_146119",227737,"Mm.301646","NM_146119","ENSMUSG00000026796","Fam129b","9130404D14Rik","family with sequence similarity 129, member B","protein-coding"]
[2198,"chr6",108662866,108663032,"+",0,"NA","intron (NM_011498, intron 4 of 4)","intron (NM_011498, intron 4 of 4)",-2015,"NR_104577",75394,"Mm.395061","NR_040757","ENSMUSG00000087341","0610040F04Rik","-","RIKEN cDNA 0610040F04 gene","ncRNA"]
[1693,"chr3",57500687,57501535,"+",0,"NA","intron (NM_001168281, intron 3 of 6)","intron (NM_001168281, intron 3 of 6)",74765,"NM_133784",97064,"Mm.405029","NM_133784","ENSMUSG00000027803","Wwtr1","2310058J06Rik|2610021I22Rik|C78399|Taz","WW domain containing transcription regulator 1","protein-coding"]
[316,"chr10",96721635,96722414,"+",0,"NA","Intergenic","Intergenic",105023,"NM_007569",12226,"Mm.23811","NM_007569","ENSMUSG00000036478","Btg1","AI426953|AW546738","B cell translocation gene 1, anti-proliferative","protein-coding"]
[1806,"chr3",138744392,138745477,"+",0,"NA","intron (NR_121195, intron 1 of 7)","intron (NR_121195, intron 1 of 7)",2726,"NM_019571",56224,"Mm.31927","NM_019571","ENSMUSG00000028152","Tspan5","2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9","tetraspanin 5","protein-coding"]
[2288,"chr7",30816760,30816982,"+",0,"NA","Intergenic","Intergenic",4106,"NM_001168512",233079,"Mm.97338","NM_146187","ENSMUSG00000051314","Ffar2","GPCR43|Gpr43","free fatty acid receptor 2","protein-coding"]
[1738,"chr3",94610930,94611228,"+",0,"NA","Intergenic","B1F2|SINE|Alu",-28363,"NM_029721",76742,"Mm.28160","NM_029721","ENSMUSG00000028136","Snx27","5730552M22Rik|ESTM45|ESTM47|R75405","sorting nexin family member 27","protein-coding"]
[2025,"chr5",64471447,64472361,"+",0,"NA","Intergenic","Intergenic",-3962,"NR_040681",69999,"Mm.261413","NR_040681","ENSMUSG00000100911","1700027F09Rik","-","RIKEN cDNA 1700027F09 gene","ncRNA"]
[1370,"chr19",9040229,9040354,"+",0,"NA","intron (NM_001039959, intron 5 of 5)","BC1_Mm|scRNA|scRNA",22387,"NR_105786",102465190,null,"NR_105786","ENSMUSG00000099308","Mir6367","Gm27467|mmu-mir-6367","microRNA 6367","ncRNA"]
[11,"chr1",34147886,34148518,"+",0,"NA","intron (NM_001276764, intron 9 of 102)","RMER15|LTR|ERVL",-12128,"NM_010081",13518,"Mm.336625","NM_010081","ENSMUSG00000026131","Dst","2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339","dystonin","protein-coding"]
[2649,"chr9",78508230,78508915,"+",0,"NA","Intergenic","Intergenic",-26848,"NM_010106",13627,"Mm.138471","NM_010106","ENSMUSG00000037742","Eef1a1","-","eukaryotic translation elongation factor 1 alpha 1","protein-coding"]
[511,"chr11",110448617,110449228,"+",0,"NA","intron (NM_011943, intron 1 of 11)","intron (NM_011943, intron 1 of 11)",49800,"NM_011943",26399,"Mm.14487","NM_011943","ENSMUSG00000020623","Map2k6","MEK6|MKK6|Prkmk6|SAPKK3","mitogen-activated protein kinase kinase 6","protein-coding"]
[842,"chr14",47367139,47367571,"+",0,"NA","Intergenic","(TTTA)n|Simple_repeat|Simple_repeat",-6505,"NM_010705",16854,"Mm.248615","NM_010705","ENSMUSG00000050335","Lgals3","GBP|L-34|Mac-2|gal3","lectin, galactose binding, soluble 3","protein-coding"]
[2367,"chr7",118277256,118277976,"+",0,"NA","Intergenic","Intergenic",33709,"NR_027879",67745,"Mm.483404","NM_183267","ENSMUSG00000055159","4930583K01Rik","-","RIKEN cDNA 4930583K01 gene","ncRNA"]
[899,"chr14",105256054,105256393,"+",0,"NA","Intergenic","Intergenic",-2450,"NM_029561",76273,"Mm.290669","NM_029561","ENSMUSG00000053253","Ndfip2","0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165","Nedd4 family interacting protein 2","protein-coding"]
[2000,"chr5",32336115,32339460,"+",0,"NA","intron (NM_001081407, intron 44 of 58)","intron (NM_001081407, intron 44 of 58)",-15793,"NM_172147",665270,"Mm.160067","NM_030072","ENSMUSG00000029134","Plb1","4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606","phospholipase B1","protein-coding"]
[2437,"chr8",46867283,46867691,"+",0,"NA","Intergenic","Intergenic",-119438,"NM_177304",320981,"Mm.211429","NM_177304","ENSMUSG00000038173","Enpp6","4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|Npp6","ectonucleotide pyrophosphatase/phosphodiesterase 6","protein-coding"]
[2531,"chr8",126596759,126596971,"+",0,"NA","Intergenic","Intergenic",-3429,"NM_001164598",270110,"Mm.334918","NM_001164598","ENSMUSG00000051495","Irf2bp2","E130305N23Rik|IRF-2BP2","interferon regulatory factor 2 binding protein 2","protein-coding"]
[2689,"chr9",104368024,104369756,"+",0,"NA","Intergenic","B4A|SINE|B4",-31168,"NM_207668",56318,"Mm.19941","NM_019807","ENSMUSG00000032561","Acpp","5'-NT|A030005E02Rik|FRAP|Lap|PAP|Ppal","acid phosphatase, prostate","protein-coding"]
[199,"chr1",189705665,189706786,"+",0,"NA","Intergenic","Intergenic",-18139,"NM_001081363",108000,"Mm.129746","NM_001081363","ENSMUSG00000026605","Cenpf","6530404A22Rik|AI325968|CENF|Lek1|PRO1779|mitosin","centromere protein F","protein-coding"]
[2410,"chr8",19161889,19162192,"+",0,"NA","Intergenic","Intergenic",4153,"NM_153115",78128,"Mm.229357","NM_153115","ENSMUSG00000079842","Spag11a","9230111C08Rik|Bin1b|EP2Q|EP2e|Spag11","sperm associated antigen 11A","protein-coding"]
[1979,"chr4",150860035,150861285,"+",0,"NA","intron (NM_133753, intron 1 of 3)","intron (NM_133753, intron 1 of 3)",5569,"NM_133753",74155,"Mm.318841","NM_133753","ENSMUSG00000028967","Errfi1","1300002F13Rik|AI788755|Mig-6|Mig6|RALT","ERBB receptor feedback inhibitor 1","protein-coding"]
[1899,"chr4",114359667,114360559,"+",0,"NA","Intergenic","Intergenic",-46611,"NM_001085549",666048,"Mm.331779","NM_001085549","ENSMUSG00000070867","Trabd2b","Gm12824|Hkat|OTTMUSG00000008561","TraB domain containing 2B","protein-coding"]
[1929,"chr4",132367932,132368160,"+",0,"NA","exon (NM_175306, exon 9 of 14)","exon (NM_175306, exon 9 of 14)",-14360,"NR_003270",399101,"Mm.486919","NR_002904","ENSMUSG00000085241","Snhg3","Rnu17d|U17HG","small nucleolar RNA host gene 3","ncRNA"]
[2485,"chr8",94990153,94991019,"+",0,"NA","intron (NM_018882, intron 1 of 13)","intron (NM_018882, intron 1 of 13)",6187,"NM_018882",14766,"Mm.290834","NM_018882","ENSMUSG00000031785","Adgrg1","Cyt28|Gpr56|TM7LN4|TM7XN1","adhesion G protein-coupled receptor G1","protein-coding"]
[1737,"chr3",94344601,94344711,"+",0,"NA","intron (NM_025416, intron 3 of 5)","intron (NM_025416, intron 3 of 5)",2557,"NM_025416",66198,"Mm.180200","NM_025416","ENSMUSG00000028148","Them5","1110007B02Rik|1110038F21Rik","thioesterase superfamily member 5","protein-coding"]
[1948,"chr4",137282116,137282566,"+",0,"NA","intron (NM_009523, intron 1 of 4)","intron (NM_009523, intron 1 of 4)",4706,"NM_009523",22417,"Mm.20355","NM_009523","ENSMUSG00000036856","Wnt4","Wnt-4","wingless-type MMTV integration site family, member 4","protein-coding"]
[795,"chr13",101478552,101479486,"+",0,"NA","Intergenic","Intergenic",-81439,"NR_046187",78136,"Mm.399065","NR_046187",null,"4922502H24Rik","-","RIKEN cDNA 4922502H24 gene","ncRNA"]
[1609,"chr2",141272068,141272420,"+",0,"NA","intron (NM_001013802, intron 5 of 18)","intron (NM_001013802, intron 5 of 18)",-600768,"NM_178382",71436,"Mm.426781","NM_178382","ENSMUSG00000051379","Flrt3","5530600M07Rik|C430047I10Rik|mKIAA1469","fibronectin leucine rich transmembrane protein 3","protein-coding"]
[794,"chr13",100517074,100518249,"+",0,"NA","intron (NM_008756, intron 4 of 8)","4.5SRNA|scRNA|scRNA",-25052,"NM_022011",23894,"Mm.272533","NM_022011","ENSMUSG00000021639","Gtf2h2","44kDa|BTF2 p44|BTF2-p44|Btf2p44|p44","general transcription factor II H, polypeptide 2","protein-coding"]
[944,"chr15",38409444,38409579,"+",0,"NA","Intergenic","Intergenic",81036,"NR_105916",102465574,null,"NR_105916","ENSMUSG00000099110","Mir6951","Gm27765|mmu-mir-6951","microRNA 6951","ncRNA"]
[1780,"chr3",108880646,108881013,"+",0,"NA","intron (NM_177091, intron 4 of 12)","intron (NM_177091, intron 4 of 12)",9179,"NM_177091",320181,"Mm.244233","NM_177091","ENSMUSG00000045326","Fndc7","E230011A21Rik","fibronectin type III domain containing 7","protein-coding"]
[1113,"chr16",56834884,56835030,"+",0,"NA","intron (NM_019631, intron 1 of 5)","intron (NM_019631, intron 1 of 5)",-39099,"NM_172825",239853,"Mm.258979","NM_172825","ENSMUSG00000022755","Adgrg7","9130020O16Rik|Gpr128","adhesion G protein-coupled receptor G7","protein-coding"]
[2122,"chr6",17417416,17418145,"+",0,"NA","Intergenic","Intergenic",-46177,"NM_008591",17295,"Mm.86844","NM_008591","ENSMUSG00000009376","Met","AI838057|HGF|HGFR|Par4|c-Met","met proto-oncogene","protein-coding"]
[674,"chr13",3862742,3862944,"+",0,"NA","Intergenic","MIRc|SINE|MIR",8670,"NM_001008706",494124,"Mm.483992","NM_001008706",null,"Calm5","AY314008|Scarf2","calmodulin 5","protein-coding"]
[2280,"chr7",28929633,28932759,"+",0,"NA","intron (NM_021895, intron 1 of 20)","intron (NM_021895, intron 1 of 20)",31084,"NM_021895",60595,"Mm.81144","NM_021895","ENSMUSG00000054808","Actn4","C77391","actinin alpha 4","protein-coding"]
[1317,"chr18",60867007,60867996,"+",0,"NA","Intergenic","Intergenic",-18537,"NM_001198984",21453,"Mm.486251","NM_011552","ENSMUSG00000024613","Tcof1","AA408847|AW209012|treacle","Treacher Collins Franceschetti syndrome 1, homolog","protein-coding"]
[280,"chr10",69871578,69873020,"+",0,"NA","intron (NM_170690, intron 10 of 41)","intron (NM_170690, intron 10 of 41)",-53233,"NM_170687",11735,"Mm.235960","NM_009670","ENSMUSG00000069601","Ank3","2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G","ankyrin 3, epithelial","protein-coding"]
[957,"chr15",59476979,59477309,"+",0,"NA","intron (NM_026746, intron 4 of 6)","intron (NM_026746, intron 4 of 6)",102946,"NM_001164604",68501,"Mm.27762","NM_026746","ENSMUSG00000059586","Nsmce2","1110014D18Rik|AI661537","non-SMC element 2 homolog (MMS21, S. cerevisiae)","protein-coding"]
[273,"chr10",68103807,68105371,"+",0,"NA","intron (NM_023598, intron 8 of 9)","intron (NM_023598, intron 8 of 9)",124991,"NM_001081346",170799,"Mm.209844","NM_133244","ENSMUSG00000037846","Rtkn2","B130039D23Rik|Mbf|Plekhk1","rhotekin 2","protein-coding"]
[2430,"chr8",35567592,35567998,"+",0,"NA","Intergenic","RSINE1|SINE|B4",-20003,"NM_001081279",52065,"Mm.103246","NM_001081279","ENSMUSG00000070056","Mfhas1","2310066G09Rik|D8Ertd91e","malignant fibrous histiocytoma amplified sequence 1","protein-coding"]
[471,"chr11",98783880,98784394,"+",0,"NA","Intergenic","Intergenic",-8760,"NM_145434",217166,"Mm.390397","NM_145434","ENSMUSG00000020889","Nr1d1","A530070C09Rik|R75201","nuclear receptor subfamily 1, group D, member 1","protein-coding"]
[2596,"chr9",54643690,54644059,"+",0,"NA","intron (NM_053178, intron 1 of 13)","intron (NM_053178, intron 1 of 13)",18011,"NM_053178",94180,"Mm.20592","NM_053178","ENSMUSG00000032281","Acsbg1","BG1|Bgm|E230019G03Rik|Lpd|R75185|mKIAA0631","acyl-CoA synthetase bubblegum family member 1","protein-coding"]
[1503,"chr2",35273172,35273899,"+",0,"NA","intron (NM_001206369, intron 1 of 16)","intron (NM_001206369, intron 1 of 16)",6791,"NM_001206369",227753,"Mm.443","NM_146120","ENSMUSG00000026879","Gsn","ADF","gelsolin","protein-coding"]
[2262,"chr7",19816121,19817358,"+",0,"NA","intron (NM_033601, intron 2 of 8)","intron (NM_033601, intron 2 of 8)",6016,"NM_033601",12051,"Mm.439658","NM_033601","ENSMUSG00000053175","Bcl3","AI528691|Bcl-3","B cell leukemia/lymphoma 3","protein-coding"]
[1509,"chr2",35501163,35503117,"+",0,"NA","Intergenic","Intergenic",-40691,"NM_001145821",14594,"Mm.281124","NM_010283","ENSMUSG00000035778","Ggta1","AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT","glycoprotein galactosyltransferase alpha 1, 3","protein-coding"]
[1936,"chr4",134299526,134300337,"+",0,"NA","Intergenic","Intergenic",-12085,"NM_146156",230809,"Mm.22778","NM_146156","ENSMUSG00000050890","Pdik1l","BC027088|stk35l2","PDLIM1 interacting kinase 1 like","protein-coding"]
[1325,"chr18",62101399,62102704,"+",0,"NA","Intergenic","(GA)n|Simple_repeat|Simple_repeat",77930,"NM_007420",11555,"Mm.5598","NM_007420","ENSMUSG00000045730","Adrb2","Adrb-2|Badm|Gpcr7","adrenergic receptor, beta 2","protein-coding"]
[2512,"chr8",117258640,117259551,"+",0,"NA","intron (NM_001163262, intron 1 of 20)","intron (NM_001163262, intron 1 of 20)",2076,"NM_001163262",74440,"Mm.233181","NM_028941","ENSMUSG00000034390","Cmip","4933407C03Rik|5830471E12Rik|AI314065|AI464126","c-Maf inducing protein","protein-coding"]
[1643,"chr2",164434786,164438073,"+",0,"NA","intron (NM_011521, intron 1 of 4)","intron (NM_011521, intron 1 of 4)",6759,"NM_011521",20971,"Mm.3815","NM_011521","ENSMUSG00000017009","Sdc4","AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4","syndecan 4","protein-coding"]
[131,"chr1",135861737,135863742,"+",0,"NA","Intergenic","Intergenic",21878,"NM_001130176",21956,"Mm.247470","NM_011619","ENSMUSG00000026414","Tnnt2","Tnt|cTnT","troponin T2, cardiac","protein-coding"]
[1565,"chr2",102884058,102884470,"+",0,"NA","intron (NM_001039150, intron 1 of 13)","intron (NM_001039150, intron 1 of 13)",17401,"NM_001177785",12505,"Mm.423621","NM_009851","ENSMUSG00000005087","Cd44","AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1","CD44 antigen","protein-coding"]
[502,"chr11",103895708,103900772,"+",0,"NA","intron (NM_008740, intron 8 of 20)","intron (NM_008740, intron 8 of 20)",55816,"NM_008740",18195,"Mm.260117","NM_008740","ENSMUSG00000034187","Nsf","AI316878|AU020090|AU067812|SKD2","N-ethylmaleimide sensitive fusion protein","protein-coding"]
[1286,"chr18",21371594,21373703,"+",0,"NA","Intergenic","Intergenic",-72509,"NM_001033445",381126,"Mm.312276","NM_001033445","ENSMUSG00000042680","Garem","C86169|Fam59a|Gm944|mKIAA4238","GRB2 associated, regulator of MAPK1","protein-coding"]
[314,"chr10",96691445,96691784,"+",0,"NA","Intergenic","Intergenic",74613,"NM_007569",12226,"Mm.23811","NM_007569","ENSMUSG00000036478","Btg1","AI426953|AW546738","B cell translocation gene 1, anti-proliferative","protein-coding"]
[1796,"chr3",129571961,129572072,"+",0,"NA","intron (NM_130450, intron 2 of 4)","B4|SINE|B4",39630,"NM_130450",170439,"Mm.314113","NM_130450","ENSMUSG00000041220","Elovl6","C77826|FAE|LCE","ELOVL family member 6, elongation of long chain fatty acids (yeast)","protein-coding"]
[1502,"chr2",35272061,35272425,"+",0,"NA","intron (NM_001206369, intron 1 of 16)","intron (NM_001206369, intron 1 of 16)",5499,"NM_001206369",227753,"Mm.443","NM_146120","ENSMUSG00000026879","Gsn","ADF","gelsolin","protein-coding"]
[2638,"chr9",75421966,75422423,"+",0,"NA","Intergenic","Intergenic",12010,"NR_040719",71274,"Mm.399152","NR_040719","ENSMUSG00000097021","4933433G15Rik","4921522K19Rik","RIKEN cDNA 4933433G15 gene","ncRNA"]
[1872,"chr4",82509851,82509979,"+",0,"NA","Intergenic","Intergenic",-4136,"NM_008687",18028,"Mm.317947","NM_008687","ENSMUSG00000008575","Nfib","6720429L07Rik|CTF|E030026I10Rik|NF-I/B|NF1-B|NFI-B","nuclear factor I/B","protein-coding"]
[355,"chr11",20532060,20532310,"+",0,"NA","Intergenic","CpG",-11068,"NM_021372",58172,"Mm.339676","NM_021372","ENSMUSG00000049800","Sertad2","AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127","SERTA domain containing 2","protein-coding"]
[553,"chr12",35669821,35671036,"+",0,"NA","Intergenic","Lx7|LINE|L1",15876,"NR_045051",71581,"Mm.100110","NR_045050",null,"9130015A21Rik","-","RIKEN cDNA 9130015A21 gene","ncRNA"]
[2058,"chr5",103736811,103737645,"+",0,"NA","Intergenic","Intergenic",-16934,"NM_133919",17355,"Mm.6949","NM_133919","ENSMUSG00000029313","Aff1","9630032B01Rik|AW319193|Af4|Mllt2h|Rob","AF4/FMR2 family, member 1","protein-coding"]
[1252,"chr17",83962331,83963310,"+",0,"NA","Intergenic","Intergenic",-35732,"NR_130994",78148,"Mm.243918","NR_130994",null,"8430430B14Rik","-","RIKEN cDNA 8430430B14 gene","ncRNA"]
[2643,"chr9",77531620,77531766,"+",0,"NA","intron (NM_001146048, intron 1 of 13)","intron (NM_001146048, intron 1 of 13)",12366,"NM_172528",214345,"Mm.28534","NM_172528","ENSMUSG00000032352","Lrrc1","A430093J20Rik|AU016091|D030059I21|mKIAA4018","leucine rich repeat containing 1","protein-coding"]
[555,"chr12",35831142,35831285,"+",0,"NA","Intergenic","Intergenic",-94408,"NM_207531",403205,"Mm.190508","NM_207531","ENSMUSG00000036231","Agr3","BCMP11|E030025L21Rik|Gm888","anterior gradient 3","protein-coding"]
[1037,"chr16",10335881,10336397,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-4854,"NR_126064",381033,"Mm.263108","NR_126064",null,"Gm1600","Gm1776","predicted gene 1600","ncRNA"]
[2513,"chr8",117561424,117562592,"+",0,"NA","intron (NM_172285, intron 5 of 32)","RMER17C|LTR|ERVK",63717,"NM_172285",234779,"Mm.192699","NM_172285","ENSMUSG00000034330","Plcg2","PLCgamma2|Plcg-2","phospholipase C, gamma 2","protein-coding"]
[37,"chr1",59730257,59731254,"+",0,"NA","Intergenic","Intergenic",25947,"NR_028521",100217421,null,"NR_028521",null,"Snord11","MBII-95","small nucleolar RNA, C/D box 11","snoRNA"]
[855,"chr14",62849626,62850923,"+",0,"NA","intron (NM_175546, intron 1 of 11)","intron (NM_175546, intron 1 of 11)",12553,"NR_106174",102465889,null,"NR_106174","ENSMUSG00000099245","Mir8098","Gm27462|mmu-mir-8098","microRNA 8098","ncRNA"]
[195,"chr1",182506236,182506636,"+",0,"NA","intron (NM_009794, intron 2 of 20)","MIR3|SINE|MIR",11047,"NM_009794",12334,"Mm.19306","NM_009794","ENSMUSG00000026509","Capn2","AI326419|Capa-2|Capa2|m-calpain|m-calpin","calpain 2","protein-coding"]
[2005,"chr5",35033873,35034417,"+",0,"NA","TTS (NM_001163512)","TTS (NM_001163512)",-7364,"NM_019447",54426,"Mm.27369","NM_019447","ENSMUSG00000029102","Hgfac","HGFA","hepatocyte growth factor activator","protein-coding"]
[1706,"chr3",84020630,84024235,"+",0,"NA","intron (NM_172681, intron 3 of 34)","LTR88b|LTR|Gypsy?",17729,"NM_172681",229473,"Mm.28838","NM_172681","ENSMUSG00000033767","D930015E06Rik","Kiaa0922|mKIAA0922","RIKEN cDNA D930015E06 gene","protein-coding"]
[1839,"chr4",40802196,40802678,"+",0,"NA","Intergenic","MER21B|LTR|ERVL",-44552,"NM_021535",74255,"Mm.289929","NM_021535",null,"Smu1","2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd","smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)","protein-coding"]
[1788,"chr3",126660285,126661413,"+",0,"NA","intron (NM_001293665, intron 2 of 19)","intron (NM_001293665, intron 2 of 19)",63898,"NM_023813",108058,"Mm.255822","NM_023813","ENSMUSG00000053819","Camk2d","2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII","calcium/calmodulin-dependent protein kinase II, delta","protein-coding"]
[2186,"chr6",97293102,97294922,"+",0,"NA","intron (NM_145148, intron 22 of 23)","intron (NM_145148, intron 22 of 23)",-41232,"NM_001081157",320502,"Mm.68163","NM_001081157","ENSMUSG00000044086","Lmod3","5430424A14Rik","leiomodin 3 (fetal)","protein-coding"]
[679,"chr13",5861639,5866572,"+",0,"NA","intron (NM_011803, intron 1 of 3)","intron (NM_011803, intron 1 of 3)",2616,"NM_011803",23849,"Mm.275036","NM_011803","ENSMUSG00000000078","Klf6","AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9","Kruppel-like factor 6","protein-coding"]
[680,"chr13",5870698,5871197,"+",0,"NA","TTS (NM_011803)","TTS (NM_011803)",9458,"NM_011803",23849,"Mm.275036","NM_011803","ENSMUSG00000000078","Klf6","AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9","Kruppel-like factor 6","protein-coding"]
[831,"chr14",25028302,25028525,"+",0,"NA","Intergenic","Intergenic",114828,"NR_045718",75862,"Mm.109191","NR_045718",null,"4930572O13Rik","-","RIKEN cDNA 4930572O13 gene","ncRNA"]
[1147,"chr16",95707439,95708446,"+",0,"NA","intron (NM_011809, intron 2 of 9)","B4|SINE|B4",5535,"NM_011809",23872,"Mm.290207","NM_011809","ENSMUSG00000022895","Ets2","AU022856|Ets-2","E26 avian leukemia oncogene 2, 3' domain","protein-coding"]
[1960,"chr4",142070457,142071304,"+",0,"NA","intron (NM_145402, intron 1 of 2)","intron (NM_145402, intron 1 of 2)",-13418,"NR_027137",100038693,"Mm.402714","NR_027137","ENSMUSG00000073728","Tmem51os1","ENSMUSG00000073728|Gm10565|Tmem51as1","Tmem51 opposite strand 1","ncRNA"]
[2355,"chr7",109601176,109601365,"+",0,"NA","intron (NM_029811, intron 1 of 18)","intron (NM_029811, intron 1 of 18)",15298,"NR_037617",76954,"Mm.252009","NM_029811","ENSMUSG00000031024","St5","2010004M01Rik|2610305K15Rik","suppression of tumorigenicity 5","protein-coding"]
[1241,"chr17",78248466,78248588,"+",0,"NA","intron (NM_015800, intron 2 of 16)","intron (NM_015800, intron 2 of 16)",48279,"NM_015800",50766,"Mm.311912","NM_015800","ENSMUSG00000024074","Crim1","AU015004","cysteine rich transmembrane BMP regulator 1 (chordin like)","protein-coding"]
[1441,"chr2",9352683,9353350,"+",0,"NA","Intergenic","Intergenic",163501,"NR_038180",73438,"Mm.23558","NR_038180","ENSMUSG00000085580","1700061F12Rik","-","RIKEN cDNA 1700061F12 gene","ncRNA"]
[647,"chr12",99356452,99357557,"+",0,"NA","intron (NM_183186, intron 2 of 5)","intron (NM_183186, intron 2 of 5)",93070,"NM_183186",71375,"Mm.341972","NM_183186","ENSMUSG00000033713","Foxn3","5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1","forkhead box N3","protein-coding"]
[1206,"chr17",35706320,35706910,"+",0,"NA","Intergenic","Intergenic",-2476,"NM_172962",12305,"Mm.5021","NM_007584","ENSMUSG00000003534","Ddr1","6030432F18|AI323681|CD167a|Cak|Nep|PTK3A","discoidin domain receptor family, member 1","protein-coding"]
[334,"chr10",116768248,116772425,"+",0,"NA","Intergenic","Intergenic",41083,"NR_131036",75878,"Mm.370607","NR_131036",null,"4930579P08Rik","-","RIKEN cDNA 4930579P08 gene","ncRNA"]
[2292,"chr7",35121848,35123480,"+",0,"NA","TTS (NM_007678)","TTS (NM_007678)",3371,"NM_007678",12606,"Mm.349667","NM_007678","ENSMUSG00000034957","Cebpa","C/ebpalpha|CBF-A|Cebp","CCAAT/enhancer binding protein (C/EBP), alpha","protein-coding"]
[1997,"chr5",31967092,31968450,"+",0,"NA","intron (NM_181279, intron 9 of 13)","intron (NM_181279, intron 9 of 13)",-168701,"NM_008037",14284,"Mm.24684","NM_008037","ENSMUSG00000029135","Fosl2","Fra-2","fos-like antigen 2","protein-coding"]
[1027,"chr15",101150675,101150840,"+",0,"NA","Intergenic","(CAAAAA)n|Simple_repeat|Simple_repeat",22235,"NM_001277257",11482,"Mm.279542","NM_009612","ENSMUSG00000000530","Acvrl1","AI115505|AI427544|Acvrlk1|Alk1","activin A receptor, type II-like 1","protein-coding"]
[1680,"chr3",38565014,38565542,"+",0,"NA","Intergenic","Intergenic",-80462,"NM_001167883",99696,"Mm.290937","NM_001033198","ENSMUSG00000044864","Ankrd50","AI662170|E430012K20Rik|mKIAA1223|mKIAA3019","ankyrin repeat domain 50","protein-coding"]
[423,"chr11",74838792,74839072,"+",0,"NA","intron (NM_010813, intron 4 of 5)","intron (NM_010813, intron 4 of 5)",8008,"NM_010813",17428,"Mm.3759","NM_010813","ENSMUSG00000000282","Mnt","Rox|bHLHd3","max binding protein","protein-coding"]
[1953,"chr4",139520960,139521678,"+",0,"NA","Intergenic","Intergenic",-9229,"NM_183148",212632,"Mm.30464","NM_183148","ENSMUSG00000041025","Iffo2","C79267","intermediate filament family orphan 2","protein-coding"]
[1139,"chr16",87660467,87664004,"+",0,"NA","Intergenic","(TATAA)n|Simple_repeat|Simple_repeat",-36719,"NM_007520",12013,"Mm.26147","NM_007520","ENSMUSG00000025612","Bach1","6230421P05Rik|AI323795","BTB and CNC homology 1","protein-coding"]
[1319,"chr18",61245944,61246104,"+",0,"NA","intron (NM_146086, intron 6 of 21)","intron (NM_146086, intron 6 of 21)",25525,"NM_146086",225600,"Mm.391106","NM_146086","ENSMUSG00000024575","Pde6a","Pdea|nmf282","phosphodiesterase 6A, cGMP-specific, rod, alpha","protein-coding"]
[1826,"chr4",11419033,11419303,"+",0,"NA","Intergenic","Intergenic",-32385,"NM_194055",207920,"Mm.387719","NM_194055","ENSMUSG00000040728","Esrp1","2210008M09Rik|A630065D16|BC031468|Rbm35a","epithelial splicing regulatory protein 1","protein-coding"]
[2454,"chr8",79209102,79209853,"+",0,"NA","TTS (NM_026315)","TTS (NM_026315)",39106,"NM_026315",67687,"Mm.178707","NM_026315","ENSMUSG00000031682","1700011L22Rik","-","RIKEN cDNA 1700011L22 gene","protein-coding"]
[2077,"chr5",122430898,122431309,"+",0,"NA","intron (NM_019805, intron 3 of 10)","PB1D9|SINE|Alu",8659,"NM_019805",56317,"Mm.37341","NM_019805","ENSMUSG00000029466","Anapc7","APC7|AW545589","anaphase promoting complex subunit 7","protein-coding"]
[1222,"chr17",47064355,47065692,"+",0,"NA","Intergenic","Intergenic",-54491,"NM_001177374",224826,"Mm.28234","NM_146078","ENSMUSG00000023977","Ubr2","9930021A08Rik|AI462103|AW540746|E130209G04Rik|mKIAA0349","ubiquitin protein ligase E3 component n-recognin 2","protein-coding"]
[2036,"chr5",65524672,65525313,"+",0,"NA","Intergenic","ORR1E|LTR|ERVL-MaLR",-12253,"NM_016786",53323,"Mm.319512","NM_016786","ENSMUSG00000029203","Ube2k","AW492011|D5Ertd601e|E2-25k|HIP-2|Hip2|Hypg|Lig","ubiquitin-conjugating enzyme E2K","protein-coding"]
[1747,"chr3",95668666,95669562,"+",0,"NA","Intergenic","Intergenic",10393,"NM_008562",17210,"Mm.1639","NM_008562","ENSMUSG00000038612","Mcl1","AW556805|Mcl-1","myeloid cell leukemia sequence 1","protein-coding"]
[174,"chr1",171470856,171471240,"+",0,"NA","Intergenic","Intergenic",-32430,"NM_019484",56009,"Mm.389208","NM_019484","ENSMUSG00000060244","Alyref2","C130042O11Rik|REF2|Refbp2","Aly/REF export factor 2","protein-coding"]
[820,"chr14",9765953,9766770,"+",0,"NA","intron (NM_001308286, intron 4 of 6)","intron (NM_001308286, intron 4 of 6)",-117734,"NR_030680",100042415,"Mm.235938","NR_030680",null,"Mnd1-ps","Gm3833","Mnd1 retrotransposed pseudogene","pseudo"]
[1799,"chr3",135404303,135405082,"+",0,"NA","Intergenic","Intergenic",18741,"NM_025902",67006,"Mm.269993","NM_025902","ENSMUSG00000028165","Cisd2","1500009M05Rik|1500026J14Rik|1500031D15Rik|AI848398|B630006A20Rik|Miner1|Noxp70|Zcd2","CDGSH iron sulfur domain 2","protein-coding"]
[1571,"chr2",103460014,103461269,"+",0,"NA","intron (NM_009804, intron 9 of 12)","intron (NM_009804, intron 9 of 12)",24512,"NM_009804",12359,"Mm.4215","NM_009804","ENSMUSG00000027187","Cat","2210418N07|Cas-1|Cas1|Cs-1","catalase","protein-coding"]
[422,"chr11",74838004,74838277,"+",0,"NA","intron (NM_010813, intron 4 of 5)","CpG",7216,"NM_010813",17428,"Mm.3759","NM_010813","ENSMUSG00000000282","Mnt","Rox|bHLHd3","max binding protein","protein-coding"]
[905,"chr14",118565353,118565514,"+",0,"NA","intron (NM_001163675, intron 19 of 30)","intron (NM_001163675, intron 19 of 30)",27039,"NR_105815",102465208,null,"NR_105815","ENSMUSG00000098433","Mir6391","Gm27914|mmu-mir-6391","microRNA 6391","ncRNA"]
[1552,"chr2",84633369,84634713,"+",0,"NA","intron (NM_007615, intron 1 of 19)","intron (NM_007615, intron 1 of 19)",16469,"NM_001085453",12388,"Mm.35738","NM_007615","ENSMUSG00000034101","Ctnnd1","AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384","catenin (cadherin associated protein), delta 1","protein-coding"]
[1194,"chr17",29394583,29394724,"+",0,"NA","Intergenic","Intergenic",33739,"NM_001159538",26382,"Mm.279187","NM_013710","ENSMUSG00000024013","Fgd2","Tcd-2|Tcd2|ZFYVE4|tcs-2|tcs2","FYVE, RhoGEF and PH domain containing 2","protein-coding"]
[41,"chr1",64601899,64602137,"+",0,"NA","3' UTR (NM_009952, exon 9 of 9)","3' UTR (NM_009952, exon 9 of 9)",15150,"NM_025964",67099,"Mm.46394","NM_025964","ENSMUSG00000025956","Mettl21a","2310038H17Rik|AI464204|Fam119a","methyltransferase like 21A","protein-coding"]
[52,"chr1",72244027,72244569,"+",0,"NA","Intergenic","U2|snRNA|snRNA",-31991,"NM_001005423",381269,"Mm.422636","NM_001005423","ENSMUSG00000039395","Mreg","Gm974|Wdt2|dsu","melanoregulin","protein-coding"]
[1451,"chr2",11707461,11710007,"+",0,"NA","intron (NM_001271500, intron 1 of 5)","intron (NM_001271500, intron 1 of 5)",3022,"NM_001271500",16169,"Mm.200196","NM_008358","ENSMUSG00000023206","Il15ra","AA690181|IL-15RA","interleukin 15 receptor, alpha chain","protein-coding"]
[302,"chr10",86339899,86340523,"+",0,"NA","intron (NM_011595, intron 2 of 4)","intron (NM_011595, intron 2 of 4)",39799,"NM_011595",21859,"Mm.4871","NM_011595","ENSMUSG00000020044","Timp3","Timp-3","tissue inhibitor of metalloproteinase 3","protein-coding"]
[1453,"chr2",17877787,17878064,"+",0,"NA","Intergenic","Intergenic",119033,"NM_026627",68231,"Mm.23887","NM_026627","ENSMUSG00000062651","H2afb1","1700113O17Rik|H2A.Bbd|H2al2|TSEG-1|Tseg1","H2A histone family, member B1","protein-coding"]
[866,"chr14",70575165,70575279,"+",0,"NA","Intergenic","Intergenic",-2625,"NM_153136",213484,"Mm.34191","NM_153136","ENSMUSG00000045211","Nudt18","BC036718","nudix (nucleoside diphosphate linked moiety X)-type motif 18","protein-coding"]
[2452,"chr8",73342685,73343072,"+",0,"NA","intron (NM_010687, intron 1 of 14)","intron (NM_010687, intron 1 of 14)",9678,"NM_010687",16795,"Mm.324371","NM_010687","ENSMUSG00000004383","Large","BPFD#36|Gyltl1a|Mbp-1|Mbp1|enr|fg|froggy|mKIAA0609|myd","like-glycosyltransferase","protein-coding"]
[2223,"chr6",125352187,125352404,"+",0,"NA","intron (NM_011609, intron 1 of 9)","intron (NM_011609, intron 1 of 9)",2572,"NM_011609",21937,"Mm.1258","NM_011609","ENSMUSG00000030341","Tnfrsf1a","CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R","tumor necrosis factor receptor superfamily, member 1a","protein-coding"]
[593,"chr12",70740126,70740426,"+",0,"NA","Intergenic","Intergenic",-85238,"NM_028127",319710,"Mm.2962","NM_028127","ENSMUSG00000048285","Frmd6","2610019M19Rik|4930488L10Rik|AW212977|Willin","FERM domain containing 6","protein-coding"]
[770,"chr13",72767703,72767857,"+",0,"NA","Intergenic","GA-rich|Low_complexity|Low_complexity",48983,"NR_046196",78446,"Mm.244082","NR_046196",null,"D730050B12Rik","-","RIKEN cDNA D730050B12 gene","ncRNA"]
[188,"chr1",180847975,180850080,"+",0,"NA","Intergenic","Intergenic",-2124,"NM_145943",208768,"Mm.272625","NM_145943","ENSMUSG00000038806","Sde2","-","SDE2 telomere maintenance homolog (S. pombe)","protein-coding"]
[402,"chr11",65129089,65129253,"+",0,"NA","intron (NM_175003, intron 1 of 20)","intron (NM_175003, intron 1 of 20)",33790,"NM_001099288",216831,"Mm.134338","NM_175003","ENSMUSG00000033389","Arhgap44","6330543G20|AI840762|AU040829|AW493732|Rich2","Rho GTPase activating protein 44","protein-coding"]
[1940,"chr4",135599730,135599951,"+",0,"NA","Intergenic","Intergenic",-26220,"NM_001013756",230824,"Mm.331972","NM_001013756","ENSMUSG00000037188","Grhl3","AI561912|Get1|Som|Tfcp2l4|ct","grainyhead-like 3 (Drosophila)","protein-coding"]
[1097,"chr16",32645664,32648237,"+",0,"NA","intron (NM_016788, intron 1 of 15)","B1_Mm|SINE|Alu",2307,"NM_016788",51789,"Mm.251115","NM_016788","ENSMUSG00000022791","Tnk2","Ack|Ack-1|Ack1|Cdgip|Pyk1","tyrosine kinase, non-receptor, 2","protein-coding"]
[641,"chr12",86894105,86894332,"+",0,"NA","Intergenic","Intergenic",-9404,"NM_145836",238330,"Mm.248358","NM_145836","ENSMUSG00000034168","Irf2bpl","6430527G18Rik|Eap1","interferon regulatory factor 2 binding protein-like","protein-coding"]
[1641,"chr2",164431341,164431514,"+",0,"NA","intron (NM_011521, intron 1 of 4)","intron (NM_011521, intron 1 of 4)",11761,"NM_011521",20971,"Mm.3815","NM_011521","ENSMUSG00000017009","Sdc4","AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4","syndecan 4","protein-coding"]
[838,"chr14",34618683,34618941,"+",0,"NA","Intergenic","Intergenic",-18670,"NM_013887",30044,"Mm.272060","NM_013887","ENSMUSG00000021799","Opn4","1110007J02Rik|Gm533","opsin 4 (melanopsin)","protein-coding"]
[2664,"chr9",90069139,90069408,"+",0,"NA","intron (NM_001312649, intron 8 of 10)","RMER15|LTR|ERVL",15006,"NM_001312649",13036,"Mm.2277","NM_007801","ENSMUSG00000032359","Ctsh","AL022844","cathepsin H","protein-coding"]
[616,"chr12",79498039,79500149,"+",0,"NA","intron (NM_009014, intron 7 of 10)","intron (NM_009014, intron 7 of 10)",201743,"NM_001252562",19363,"Mm.341756","NM_009014","ENSMUSG00000059060","Rad51b","AI553500|R51H2|Rad51l1|mREC2","RAD51 homolog B","protein-coding"]
[640,"chr12",86892261,86892398,"+",0,"NA","Intergenic","Intergenic",-7515,"NM_145836",238330,"Mm.248358","NM_145836","ENSMUSG00000034168","Irf2bpl","6430527G18Rik|Eap1","interferon regulatory factor 2 binding protein-like","protein-coding"]
[1121,"chr16",64872933,64874163,"+",0,"NA","Intergenic","Intergenic",21463,"NM_178647",106143,"Mm.10160","NM_178647","ENSMUSG00000054604","Cggbp1","AA960172|AL023996|AW045841","CGG triplet repeat binding protein 1","protein-coding"]
[870,"chr14",73448098,73448913,"+",0,"NA","Intergenic","Intergenic",-61544,"NM_026119",67381,"Mm.282888","NM_026119","ENSMUSG00000022109","Med4","2410046H15Rik|DRIP36|HSPC126|TRAP36|Vdirp|Vdrip","mediator complex subunit 4","protein-coding"]
[1384,"chr19",21175837,21176369,"+",0,"NA","Intergenic","Intergenic",71393,"NR_126458",75354,"Mm.243873","NR_126458",null,"4930554I06Rik","-","RIKEN cDNA 4930554I06 gene","ncRNA"]
[896,"chr14",103501689,103502437,"+",0,"NA","Intergenic","Intergenic",-11278,"NM_022886",64929,"Mm.244003","NM_022886","ENSMUSG00000022123","Scel","9230114I02Rik","sciellin","protein-coding"]
[1468,"chr2",25172529,25173729,"+",0,"NA","Intergenic","Intergenic",-7629,"NM_025980",67122,"Mm.46539","NM_025980","ENSMUSG00000078202","Nrarp","2700054M22Rik","Notch-regulated ankyrin repeat protein","protein-coding"]
[2068,"chr5",117314896,117315024,"+",0,"NA","Intergenic","Intergenic",-4306,"NM_001033311",231668,"Mm.298603","NM_001033311","ENSMUSG00000066894","Vsig10","-","V-set and immunoglobulin domain containing 10","protein-coding"]
[1726,"chr3",89378972,89379659,"+",0,"NA","3' UTR (NM_009565, exon 3 of 3)","3' UTR (NM_009565, exon 3 of 3)",-12549,"NR_040403",545539,"Mm.393389","NR_040403","ENSMUSG00000074466","Gm15417","ENSMUSG00000074466|OTTMUSG00000021274","predicted gene 15417","ncRNA"]
[1464,"chr2",23036743,23036866,"+",0,"NA","intron (NM_001077190, intron 1 of 10)","intron (NM_001077190, intron 1 of 10)",3437,"NM_001077192",11308,"Mm.205647","NM_007380","ENSMUSG00000058835","Abi1","E3B1|NAP1|Ssh3bp1|abi-1","abl-interactor 1","protein-coding"]
[2165,"chr6",67303023,67303222,"+",0,"NA","intron (NM_008354, intron 12 of 15)","intron (NM_008354, intron 12 of 15)",36143,"NM_025814",66870,"Mm.240490","NM_025814",null,"Serbp1","1200009K13Rik|9330147J08Rik|AL022786|Pairbp1","serpine1 mRNA binding protein 1","protein-coding"]
[2347,"chr7",98562105,98562987,"+",0,"NA","Intergenic","RLTR15|LTR|ERVK",68324,"NM_001113379",434215,"Mm.323057","NM_001113379","ENSMUSG00000090958","Lrrc32","AI426318|D11S833Eh|D7H11S833E|EG434215|Garp","leucine rich repeat containing 32","protein-coding"]
[1494,"chr2",32882424,32882579,"+",0,"NA","intron (NM_146119, intron 1 of 13)","intron (NM_146119, intron 1 of 13)",6367,"NM_146119",227737,"Mm.301646","NM_146119","ENSMUSG00000026796","Fam129b","9130404D14Rik","family with sequence similarity 129, member B","protein-coding"]
[777,"chr13",75797586,75799105,"+",0,"NA","Intergenic","Intergenic",-41541,"NM_053108",93692,"Mm.25844","NM_053108","ENSMUSG00000021591","Glrx","C86710|D13Wsu156e|Glrx1|Grx1|TTase","glutaredoxin","protein-coding"]
[2018,"chr5",53994817,53995320,"+",0,"NA","Intergenic","Intergenic",-3455,"NM_001081103",116873,"Mm.265985","NM_054083","ENSMUSG00000039156","Stim2","-","stromal interaction molecule 2","protein-coding"]
[1906,"chr4",123044250,123045424,"+",0,"NA","intron (NM_025873, intron 4 of 10)","intron (NM_025873, intron 4 of 10)",28240,"NM_025873",66966,"Mm.235030","NM_025873","ENSMUSG00000028653","Trit1","2310075G14Rik|AI314189|AI314635|AV099619|IPT|MOD5","tRNA isopentenyltransferase 1","protein-coding"]
[464,"chr11",97580410,97580584,"+",0,"NA","Intergenic","GA-rich|Low_complexity|Low_complexity",-5371,"NM_018873",56013,"Mm.342665","NM_018873","ENSMUSG00000038453","Srcin1","P140|SNIP|mKIAA1684|p140Cap","SRC kinase signaling inhibitor 1","protein-coding"]
[1672,"chr3",21672856,21673132,"+",0,"NA","Intergenic","Intergenic",-403658,"NM_030732",81004,"Mm.202966","NM_030732","ENSMUSG00000027630","Tbl1xr1","8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1","transducin (beta)-like 1X-linked receptor 1","protein-coding"]
[2325,"chr7",76006701,76006815,"+",0,"NA","Intergenic","Intergenic",158420,"NM_029652",207952,"Mm.206223","NM_029652","ENSMUSG00000055652","Klhl25","2810402K13Rik|BC027373|Enc-1","kelch-like 25","protein-coding"]
[1685,"chr3",52048572,52048897,"+",0,"NA","intron (NM_001004176, intron 1 of 4)","B4A|SINE|B4",56272,"NM_001004176",433586,"Mm.234972","NM_001004176","ENSMUSG00000061143","Maml3","AV234550|BC049812|Mam-2|mKIAA1816","mastermind like 3 (Drosophila)","protein-coding"]
[2011,"chr5",43148912,43149660,"+",0,"NA","Intergenic","Intergenic",-84177,"NM_175937",231207,"Mm.7233","NM_175937","ENSMUSG00000039782","Cpeb2","A630055H10Rik|Cpe-bp2","cytoplasmic polyadenylation element binding protein 2","protein-coding"]
[1891,"chr4",108788818,108789463,"+",0,"NA","Intergenic","Intergenic",44444,"NM_027453",70533,"Mm.379178","NM_027453","ENSMUSG00000028568","Btf3l4","4632412E09Rik|5730434I03Rik|AI316863|AU022207|AW552446","basic transcription factor 3-like 4","protein-coding"]
[6,"chr1",24106321,24107936,"+",0,"NA","Intergenic","Intergenic",-6787,"NM_026604",68187,"Mm.87130","NM_026604","ENSMUSG00000026153","Fam135a","4921533L14Rik|AI256732|AI835491","family with sequence similarity 135, member A","protein-coding"]
[562,"chr12",51819723,51820220,"+",0,"NA","intron (NM_144788, intron 2 of 42)","B1_Mur4|SINE|Alu",9565,"NM_144788",207304,"Mm.249391","NM_144788","ENSMUSG00000035247","Hectd1","A630086P08Rik|AI844876|b2b327Clo|opm","HECT domain containing 1","protein-coding"]
[1304,"chr18",42035926,42036365,"+",0,"NA","Intergenic","MLT1A0|LTR|ERVL-MaLR",-17565,"NM_172966",269016,"Mm.45472","NM_172966","ENSMUSG00000057719","Sh3rf2","2310046K19|9130023G24Rik|AI452083|Ppp1r39|RNF158","SH3 domain containing ring finger 2","protein-coding"]
[2327,"chr7",80165257,80166603,"+",0,"NA","Intergenic","B3|SINE|B2",-20911,"NM_013659",20352,"Mm.275909","NM_013659","ENSMUSG00000030539","Sema4b","SemC|Semac|mKIAA1745","sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B","protein-coding"]
[2269,"chr7",25848293,25848595,"+",0,"NA","Intergenic","B3A|SINE|B2",-31914,"NM_028775",74134,"Mm.275188","NM_028775","ENSMUSG00000040703","Cyp2s1","1200011C15Rik|AU041727|C79779","cytochrome P450, family 2, subfamily s, polypeptide 1","protein-coding"]
[1102,"chr16",44232697,44232912,"+",0,"NA","Intergenic","Intergenic",59407,"NM_001029889",207806,"Mm.310566","NM_001029889","ENSMUSG00000068284","Gm608","5530400K22Rik|Gm1779|mKIAA2018","predicted gene 608","protein-coding"]
[183,"chr1",180313284,180314477,"+",0,"NA","Intergenic","B4A|SINE|B4",-16596,"NM_001081175",320404,"Mm.132535","NM_001081175","ENSMUSG00000038855","Itpkb","1110033J02Rik|E130307H12Rik","inositol 1,4,5-trisphosphate 3-kinase B","protein-coding"]
[2544,"chr9",14641596,14642218,"+",0,"NA","Intergenic","Intergenic",-26907,"NM_001081395",75723,"Mm.159552","NM_001081395","ENSMUSG00000013076","Amotl1","2310010G08Rik|2310067L22Rik|4932416D09Rik|JEAP|mFLJ00155","angiomotin-like 1","protein-coding"]
[1478,"chr2",27703073,27703241,"+",0,"NA","intron (NM_011305, intron 1 of 9)","intron (NM_011305, intron 1 of 9)",-6135,"NM_001290481",20181,"Mm.24624","NM_011305","ENSMUSG00000015846","Rxra","9530071D11Rik|Nr2b1|RXRalpha1","retinoid X receptor alpha","protein-coding"]
[2541,"chr9",9240929,9242099,"+",0,"NA","intron (NR_045754, intron 2 of 3)","intron (NR_045754, intron 2 of 3)",-2501,"NM_027823",71544,"Mm.334955","NM_027823","ENSMUSG00000050730","Arhgap42","9030420J04Rik|BE136619","Rho GTPase activating protein 42","protein-coding"]
[439,"chr11",87443480,87443682,"+",0,"NA","intron (NM_031386, intron 2 of 30)","intron (NM_031386, intron 2 of 30)",15990,"NM_001199293",83560,"Mm.440758","NM_031386","ENSMUSG00000010342","Tex14","C85585","testis expressed gene 14","protein-coding"]
[362,"chr11",23726160,23726517,"+",0,"NA","intron (NM_028956, intron 16 of 17)","intron (NM_028956, intron 16 of 17)",44632,"NM_009044",19696,"Mm.4869","NM_009044",null,"Rel","c-Rel","reticuloendotheliosis oncogene","protein-coding"]
[1379,"chr19",18661081,18661599,"+",0,"NA","Intergenic","MLT1F1|LTR|ERVL-MaLR",-9440,"NM_026120",67383,"Mm.306602","NM_026120","ENSMUSG00000024726","Carnmt1","2410127L17Rik","carnosine N-methyltransferase 1","protein-coding"]
[2607,"chr9",66720169,66720388,"+",0,"NA","intron (NM_001306148, intron 2 of 9)","intron (NM_001306148, intron 2 of 9)",6592,"NM_001306148",76459,"Mm.277921","NM_178396","ENSMUSG00000032373","Car12","2310047E01Rik|AI314958|CA-XII|Ca12","carbonic anyhydrase 12","protein-coding"]
[1593,"chr2",132684936,132685294,"+",0,"NA","Intergenic","Intergenic",-5168,"NM_028637",73747,"Mm.284114","NM_028637","ENSMUSG00000044991","1110034G24Rik","-","RIKEN cDNA 1110034G24 gene","protein-coding"]
[705,"chr13",37907943,37911632,"+",0,"NA","intron (NR_033615, intron 6 of 9)","intron (NR_033615, intron 6 of 9)",20916,"NM_001177869",68750,"Mm.491109","NM_026830","ENSMUSG00000039087","Rreb1","1110037N09Rik|AA414966|B930013M22Rik","ras responsive element binding protein 1","protein-coding"]
[1720,"chr3",88488958,88489104,"+",0,"NA","intron (NM_001002011, intron 1 of 11)","intron (NM_001002011, intron 1 of 11)",4281,"NM_019390",16905,"Mm.243014","NM_019390","ENSMUSG00000028063","Lmna","Dhe","lamin A","protein-coding"]
[2206,"chr6",114987149,114990039,"+",0,"NA","Intergenic","Intergenic",49280,"NM_026894",68971,"Mm.24937","NM_026894","ENSMUSG00000030316","Tamm41","1500001M20Rik|TAM41","TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)","protein-coding"]
[2496,"chr8",106561791,106562555,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-24970,"NR_045470",68692,"Mm.416843","NR_045470","ENSMUSG00000099139","1110028F18Rik","-","RIKEN cDNA 1110028F18 gene","ncRNA"]
[2177,"chr6",91202552,91202679,"+",0,"NA","Intergenic","Intergenic",-10149,"NM_001081437",14115,"Mm.249146","NM_007992","ENSMUSG00000064080","Fbln2","5730577E14Rik|FIBL-2","fibulin 2","protein-coding"]
[407,"chr11",68858563,68859955,"+",0,"NA","Intergenic","B3|SINE|B2",-6128,"NM_023668",83431,"Mm.31979","NM_023668","ENSMUSG00000018736","Ndel1","2600006O07Rik|MITAP1|NUDEL|mNudel","nuclear distribution gene E-like homolog 1 (A. nidulans)","protein-coding"]
[18,"chr1",39445102,39446231,"+",0,"NA","intron (NM_018775, intron 1 of 19)","intron (NM_018775, intron 1 of 19)",33081,"NM_018775",54610,"Mm.387293","NM_018775","ENSMUSG00000003134","Tbc1d8","AD3|HBLP1|VRP","TBC1 domain family, member 8","protein-coding"]
[376,"chr11",48838746,48839442,"+",0,"NA","intron (NM_053166, intron 2 of 6)","intron (NM_053166, intron 2 of 6)",12956,"NM_053166",94089,"Mm.390335","NM_053166",null,"Trim7","AI790312","tripartite motif-containing 7","protein-coding"]
[912,"chr14",120317589,120317706,"+",0,"NA","intron (NM_175341, intron 1 of 8)","intron (NM_175341, intron 1 of 8)",41978,"NM_175341",105559,"Mm.238266","NM_175341","ENSMUSG00000022139","Mbnl2","1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072","muscleblind-like 2","protein-coding"]
[1432,"chr19",56980147,56980603,"+",0,"NA","intron (NM_146102, intron 1 of 20)","intron (NM_146102, intron 1 of 20)",28200,"NM_146102",226250,"Mm.226284","NM_146102","ENSMUSG00000025083","Afap1l2","AU041783|C86904|mKIAA1914","actin filament associated protein 1-like 2","protein-coding"]
[785,"chr13",91163988,91166158,"+",0,"NA","intron (NM_025770, intron 2 of 7)","intron (NM_025770, intron 2 of 7)",58914,"NM_025770",66795,"Mm.235385","NM_025770","ENSMUSG00000021619","Atg10","5330424L23Rik|5430428K15Rik|AI852123|APG10|Agp10|Apg10l|Apg10p|Atg10l","autophagy related 10","protein-coding"]
[1930,"chr4",132397156,132398158,"+",0,"NA","intron (NM_001161797, intron 2 of 12)","intron (NM_001161797, intron 2 of 12)",24789,"NM_001161797",100169,"Mm.158361","NM_175306","ENSMUSG00000066043","Phactr4","3110001B12Rik|AI527228|AW495572|C330013F19Rik|N28169|mKIAA4120","phosphatase and actin regulator 4","protein-coding"]
[599,"chr12",73754322,73754461,"+",0,"NA","intron (NM_001313977, intron 11 of 14)","intron (NM_001313977, intron 11 of 14)",-146933,"NM_001313920",15251,"Mm.3879","NM_010431","ENSMUSG00000021109","Hif1a","AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78","hypoxia inducible factor 1, alpha subunit","protein-coding"]
[1393,"chr19",29064166,29064809,"+",0,"NA","Intergenic","Intergenic",-2814,"NR_045687",100503337,"Mm.103412","NR_045687",null,"Gm9895","ENSMUSG00000052976","predicted gene 9895","ncRNA"]
[1167,"chr17",13865207,13867415,"+",0,"NA","intron (NM_010806, intron 22 of 32)","intron (NM_010806, intron 22 of 32)",-82062,"NM_001122977",635895,"Mm.388844","NM_001122977","ENSMUSG00000067941","Gm7168","EG635895","predicted gene 7168","protein-coding"]
[587,"chr12",70585486,70585598,"+",0,"NA","intron (NR_037248, intron 4 of 4)","intron (NR_037248, intron 4 of 4)",132388,"NM_028339",72736,"Mm.204670","NM_028339","ENSMUSG00000021072","Tmx1","2810425A04Rik|AI465319|Txndc1","thioredoxin-related transmembrane protein 1","protein-coding"]
[609,"chr12",76463737,76465147,"+",0,"NA","Intergenic","B2_Mm2|SINE|B2",19945,"NR_028520",100041694,"Mm.259350","NR_028520",null,"Gm10451","ENSMUSG00000073000","predicted gene 10451","ncRNA"]
[1235,"chr17",70836649,70836844,"+",0,"NA","Intergenic","Intergenic",10031,"NM_001164077",21815,"Mm.101034","NM_009372","ENSMUSG00000047407","Tgif1","AA959811|AI462167|Tgif","TGFB-induced factor homeobox 1","protein-coding"]
[298,"chr10",84217967,84218298,"+",0,"NA","Intergenic","ERV3-16A3_I-int|LTR|ERVL",222339,"NM_001004363",77976,"Mm.25874","NM_001004363","ENSMUSG00000020032","Nuak1","AU014801|AW494241|B230104P22Rik|Omphk1","NUAK family, SNF1-like kinase, 1","protein-coding"]
[95,"chr1",119991663,119991955,"+",0,"NA","intron (NM_001115074, intron 1 of 22)","B4A|SINE|B4",3401,"NM_001115074",226356,"Mm.297290","NM_001115074","ENSMUSG00000036962","Cfap221","Gm101|Pcdp1","cilia and flagella associated protein 221","protein-coding"]
[923,"chr15",12490990,12491997,"+",0,"NA","intron (NM_001081064, intron 1 of 23)","intron (NM_001081064, intron 1 of 23)",101063,"NM_001081064",68070,"Mm.423205","NM_001081064","ENSMUSG00000022197","Pdzd2","4930537L06Rik|A930022H17Rik|Gm82|Pdzk3|mKIAA0300","PDZ domain containing 2","protein-coding"]
[243,"chr10",34508129,34508256,"+",0,"NA","intron (NM_010237, intron 2 of 8)","intron (NM_010237, intron 2 of 8)",24792,"NM_010237",14302,"Mm.332432","NM_010237","ENSMUSG00000019779","Frk","BSK|BSK/IYK|C85044|GTK|RAK","fyn-related kinase","protein-coding"]
[2051,"chr5",102581468,102581823,"+",0,"NA","intron (NM_029270, intron 2 of 9)","intron (NM_029270, intron 2 of 9)",100254,"NM_029270",231532,"Mm.440191","NM_029270","ENSMUSG00000057315","Arhgap24","0610025G21Rik","Rho GTPase activating protein 24","protein-coding"]
[2682,"chr9",102770571,102772475,"+",0,"NA","Intergenic","Intergenic",31875,"NR_033301",434510,"Mm.387937","NM_001034892","ENSMUSG00000093812","Gm5627","EG434510","predicted gene 5627","ncRNA"]
[148,"chr1",149956196,149958543,"+",0,"NA","intron (NM_008869, intron 1 of 17)","(CA)n|Simple_repeat|Simple_repeat",3921,"NM_008869",18783,"Mm.4186","NM_008869","ENSMUSG00000056220","Pla2g4a","Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha","phospholipase A2, group IVA (cytosolic, calcium-dependent)","protein-coding"]
[753,"chr13",56431058,56431943,"+",0,"NA","Intergenic","Intergenic",-6855,"NM_177809",328258,"Mm.482177","NM_177809",null,"Slc25a48","AU042651|E230025K15","solute carrier family 25, member 48","protein-coding"]
[1343,"chr18",74829568,74829796,"+",0,"NA","Intergenic","Intergenic",50470,"NM_177470",52538,"Mm.245724","NM_177470","ENSMUSG00000036880","Acaa2","0610011L04Rik|AI255831|AI265397|D18Ertd240e","acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)","protein-coding"]
[2489,"chr8",95497116,95497645,"+",0,"NA","Intergenic","Intergenic",-8560,"NM_009974",13000,"Mm.51136","NM_009974","ENSMUSG00000046707","Csnk2a2","1110035J23Rik|C77789|CK2","casein kinase 2, alpha prime polypeptide","protein-coding"]
[2655,"chr9",83342672,83342872,"+",0,"NA","Intergenic","Intergenic",-88775,"NR_102437",100039186,"Mm.212721","NR_102437","ENSMUSG00000099718","Gm2087","-","predicted gene 2087","ncRNA"]
[2404,"chr7",144675938,144676403,"+",0,"NA","intron (NM_001242349, intron 2 of 24)","intron (NM_001242349, intron 2 of 24)",62422,"NM_178642",101772,"Mm.26700","NM_178642","ENSMUSG00000031075","Ano1","Tmem16a","anoctamin 1, calcium activated chloride channel","protein-coding"]
[726,"chr13",43491951,43494722,"+",0,"NA","Intergenic","Intergenic",-12363,"NM_019930",56705,"Mm.148781","NM_019930","ENSMUSG00000038546","Ranbp9","IBAP-1|Ibap1|RanBPM","RAN binding protein 9","protein-coding"]
[2509,"chr8",116031263,116031561,"+",0,"NA","Intergenic","Intergenic",-324518,"NM_001025577",17132,"Mm.275549","NM_001025577",null,"Maf","2810401A20Rik|A230108G15Rik|AW047063|c-maf","avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog","protein-coding"]
[2703,"chr9",111148727,111149636,"+",0,"NA","intron (NM_001164838, intron 3 of 14)","intron (NM_001164838, intron 3 of 14)",31070,"NM_001164838",71268,"Mm.302287","NM_027742","ENSMUSG00000032497","Lrrfip2","5133400F20Rik|AI850587","leucine rich repeat (in FLII) interacting protein 2","protein-coding"]
[2171,"chr6",86568871,86569123,"+",0,"NA","Intergenic","Intergenic",41596,"NR_037961",72012,"Mm.349174","NR_037960","ENSMUSG00000097048","1600020E01Rik","-","RIKEN cDNA 1600020E01 gene","ncRNA"]
[2611,"chr9",66994254,66994730,"+",0,"NA","Intergenic","Intergenic",-19008,"NM_030717",80907,"Mm.157882","NM_030717","ENSMUSG00000032370","Lactb","LACT-1|Lact1|Mrpl56","lactamase, beta","protein-coding"]
[106,"chr1",130737588,130738594,"+",0,"NA","intron (NM_177604, intron 2 of 3)","B1_Mur3|SINE|Alu",6115,"NM_177604",212439,"Mm.268547","NM_177604","ENSMUSG00000042510","AA986860","E030025M07|Sarg","expressed sequence AA986860","protein-coding"]
[157,"chr1",156038333,156038692,"+",0,"NA","intron (NM_172843, intron 1 of 6)","B3|SINE|B2",-2032,"NM_001160018",208263,"Mm.211654","NM_144791","ENSMUSG00000026466","Tor1aip1","LAP1|Lap1B","torsin A interacting protein 1","protein-coding"]
[964,"chr15",61166006,61166215,"+",0,"NA","Intergenic","Intergenic",-244840,"NM_001081067",117586,"Mm.291499","NM_001081067","ENSMUSG00000022347","A1bg","C44","alpha-1-B glycoprotein","protein-coding"]
[2009,"chr5",43072769,43073100,"+",0,"NA","Intergenic","Intergenic",-160529,"NM_175937",231207,"Mm.7233","NM_175937","ENSMUSG00000039782","Cpeb2","A630055H10Rik|Cpe-bp2","cytoplasmic polyadenylation element binding protein 2","protein-coding"]
[65,"chr1",86179318,86179693,"+",0,"NA","intron (NM_001310702, intron 9 of 24)","intron (NM_001310702, intron 9 of 24)",24725,"NM_001310702",78795,"Mm.379264","NM_027456","ENSMUSG00000062590","Armc9","3830422A13Rik|4831423D23Rik|4930438O05Rik|5730415N24Rik","armadillo repeat containing 9","protein-coding"]
[1909,"chr4",123589413,123589935,"+",0,"NA","intron (NM_001199137, intron 1 of 92)","RSINE1|SINE|B4",-26746,"NR_105824",102465214,null,"NR_105824","ENSMUSG00000099005","Mir6398","Gm27657|mmu-mir-6398","microRNA 6398","ncRNA"]
[935,"chr15",36926963,36927458,"+",0,"NA","Intergenic","Intergenic",80192,"NM_026521",68036,"Mm.371631","NM_026521","ENSMUSG00000062397","Zfp706","3110006P09Rik|AA793007|AW536850|C77232|Znf706","zinc finger protein 706","protein-coding"]
[203,"chr1",193139018,193142706,"+",0,"NA","Intergenic","(CA)n|Simple_repeat|Simple_repeat",-10611,"NM_145415",215193,"Mm.173758","NM_145415","ENSMUSG00000016181","Diexf","AA408296|AW045375|Def","digestive organ expansion factor homolog (zebrafish)","protein-coding"]
[2627,"chr9",70281879,70282076,"+",0,"NA","intron (NM_181072, intron 1 of 27)","intron (NM_181072, intron 1 of 27)",74627,"NM_181072",71602,"Mm.249311","NM_181072","ENSMUSG00000032220","Myo1e","2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3","myosin IE","protein-coding"]
[1213,"chr17",40885548,40886254,"+",0,"NA","Intergenic","Intergenic",-5343,"NM_027834",71583,"Mm.158733","NM_027834","ENSMUSG00000054951","9130008F23Rik","-","RIKEN cDNA 9130008F23 gene","protein-coding"]
[1093,"chr16",30771050,30772602,"+",0,"NA","Intergenic","Intergenic",172103,"NM_177632",224093,"Mm.28244","NM_177632","ENSMUSG00000046546","Fam43a","Tuf1","family with sequence similarity 43, member A","protein-coding"]
[81,"chr1",93173460,93174413,"+",0,"NA","intron (NM_001310428, intron 1 of 31)","intron (NM_001310428, intron 1 of 31)",5513,"NM_001310428",381284,"Mm.193346","NM_001310428","ENSMUSG00000084989","Crocc2","E030010N08Rik|Gm976","ciliary rootlet coiled-coil, rootletin family member 2","protein-coding"]
[1023,"chr15",100086733,100087932,"+",0,"NA","intron (NR_037311, intron 2 of 3)","B4|SINE|B4",48668,"NM_001159361",239667,"Mm.243658","NM_172819","ENSMUSG00000023026","Dip2b","4932422C22|AI317237|AI854602|mKIAA1463","DIP2 disco-interacting protein 2 homolog B (Drosophila)","protein-coding"]
[2473,"chr8",91381332,91381840,"+",0,"NA","intron (NM_011936, intron 1 of 8)","intron (NM_011936, intron 1 of 8)",68061,"NM_011936",26383,"Mm.4375","NM_011936","ENSMUSG00000055932","Fto","AW743446|mKIAA1752","fat mass and obesity associated","protein-coding"]
[2084,"chr5",123869572,123870008,"+",0,"NA","Intergenic","Intergenic",-4274,"NM_030701",80885,"Mm.440567","NM_030701","ENSMUSG00000045502","Hcar2","Gpr109a|Gpr109b|HM74|Niacr1|PUMA-G|Pumag|mHM74b","hydroxycarboxylic acid receptor 2","protein-coding"]
[1300,"chr18",37881568,37881979,"+",0,"NA","intron (NM_001305981, intron 18 of 28)","intron (NM_001305981, intron 18 of 28)",-27113,"NR_105945",102465592,null,"NR_105945","ENSMUSG00000098706","Mir6979","Gm27524|mmu-mir-6979","microRNA 6979","ncRNA"]
[1199,"chr17",31843034,31844223,"+",0,"NA","TTS (NM_010831)","TTS (NM_010831)",12164,"NM_010831",17691,"Mm.290941","NM_010831","ENSMUSG00000024042","Sik1","Msk|Sik|Snf1lk","salt inducible kinase 1","protein-coding"]
[86,"chr1",106839260,106839496,"+",0,"NA","Intergenic","Intergenic",-21802,"NM_009257",20724,"Mm.268618","NM_009257","ENSMUSG00000067006","Serpinb5","1110036M19Rik|AI462524|AI646751|Maspin|PI-5|Spi7|ovalbumin","serine (or cysteine) peptidase inhibitor, clade B, member 5","protein-coding"]
[624,"chr12",80098309,80098881,"+",0,"NA","Intergenic","B1_Mur2|SINE|Alu",14418,"NM_007564",12192,"Mm.235132","NM_007564","ENSMUSG00000021127","Zfp36l1","AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1","zinc finger protein 36, C3H type-like 1","protein-coding"]
[2598,"chr9",55137172,55137569,"+",0,"NA","Intergenic","Intergenic",-11999,"NM_180600",109161,"Mm.207894","NM_180600","ENSMUSG00000032307","Ube2q2","3010021M21Rik","ubiquitin-conjugating enzyme E2Q (putative) 2","protein-coding"]
[1158,"chr17",4867618,4868987,"+",0,"NA","Intergenic","Intergenic",-126772,"NM_001085355",239985,"Mm.133401","NM_001085355","ENSMUSG00000069729","Arid1b","8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235","AT rich interactive domain 1B (SWI-like)","protein-coding"]
[2170,"chr6",72930314,72930745,"+",0,"NA","Intergenic","ORR1E|LTR|ERVL-MaLR",27703,"NM_001039392",19240,"Mm.3532","NM_025284","ENSMUSG00000079523","Tmsb10","Ptmb10|Tb10","thymosin, beta 10","protein-coding"]
[371,"chr11",46172717,46173292,"+",0,"NA","Intergenic","Intergenic",2917,"NR_106098",102465715,null,"NR_106098","ENSMUSG00000099331","Mir7239","Gm27504|mmu-mir-7239","microRNA 7239","ncRNA"]
[656,"chr12",106905359,106906009,"+",0,"NA","Intergenic","Intergenic",-189360,"NR_015512",71033,"Mm.159404","NR_015512","ENSMUSG00000085820","4933406K04Rik","4930426M03Rik|4930485I22Rik|4933427G14Rik","RIKEN cDNA 4933406K04 gene","ncRNA"]
[204,"chr1",193149189,193150270,"+",0,"NA","Intergenic","Intergenic",-3383,"NM_016851",54139,"Mm.273695","NM_016851","ENSMUSG00000026638","Irf6","AI876454|E230028I05Rik|mirf6","interferon regulatory factor 6","protein-coding"]
[2335,"chr7",80838057,80839442,"+",0,"NA","Intergenic","B1_Mur3|SINE|Alu",-23359,"NM_009553",22691,"Mm.358645","NM_009553","ENSMUSG00000038797","Zscan2","Zfp-29|Zfp29","zinc finger and SCAN domain containing 2","protein-coding"]
[1041,"chr16",10373717,10374697,"+",0,"NA","intron (NM_001291001, intron 5 of 6)","intron (NM_001291001, intron 5 of 6)",21241,"NM_001099275",70426,"Mm.142181","NM_001099275","ENSMUSG00000039179","Tekt5","3300001K11Rik","tektin 5","protein-coding"]
[1990,"chr5",23400772,23403251,"+",0,"NA","Intergenic","Intergenic",32342,"NR_040469",269630,"Mm.425231","NR_040469","ENSMUSG00000073147","5031425E22Rik","-","RIKEN cDNA 5031425E22 gene","ncRNA"]
[435,"chr11",85297940,85298420,"+",0,"NA","Intergenic","Intergenic",-13074,"NM_016910",53892,"Mm.45609","NM_016910","ENSMUSG00000020525","Ppm1d","AV338790|Wip1","protein phosphatase 1D magnesium-dependent, delta isoform","protein-coding"]
[814,"chr13",114637121,114637231,"+",0,"NA","intron (NR_045976, intron 3 of 6)","intron (NR_045976, intron 3 of 6)",29948,"NR_045976",75161,"Mm.50406","NM_175218","ENSMUSG00000051758","4930544M13Rik","-","RIKEN cDNA 4930544M13 gene","ncRNA"]
[2492,"chr8",105794515,105796903,"+",0,"NA","intron (NM_145824, intron 3 of 13)","intron (NM_145824, intron 3 of 13)",31641,"NM_145824",74334,"Mm.4206","NM_145824","ENSMUSG00000037415","Ranbp10","4432417N03Rik","RAN binding protein 10","protein-coding"]
[1482,"chr2",30919283,30920194,"+",0,"NA","Intergenic","L1MEd|LINE|L1",-16441,"NM_022415",64292,"Mm.28768","NM_022415","ENSMUSG00000050737","Ptges","2410099E23Rik|D2Ertd369e|Pges|mPGES|mPGES-1","prostaglandin E synthase","protein-coding"]
[2109,"chr5",149002796,149003296,"+",0,"NA","Intergenic","Intergenic",-3916,"NR_040429",100503307,"Mm.188008","NR_040429","ENSMUSG00000086610","Gm15408","OTTMUSG00000021225","predicted gene 15408","ncRNA"]
[885,"chr14",99623632,99626593,"+",0,"NA","Intergenic","Intergenic",326421,"NM_009769",12224,"Mm.30262","NM_009769","ENSMUSG00000005148","Klf5","4930520J07Rik|Bteb2|CKLF|IKLF","Kruppel-like factor 5","protein-coding"]
[1412,"chr19",41993878,41994579,"+",0,"NA","intron (NM_145500, intron 1 of 2)","intron (NM_145500, intron 1 of 2)",12465,"NM_145500",226122,"Mm.22948","NM_145500","ENSMUSG00000025171","Ubtd1","BC016129","ubiquitin domain containing 1","protein-coding"]
[884,"chr14",99606492,99608887,"+",0,"NA","Intergenic","Intergenic",308998,"NM_009769",12224,"Mm.30262","NM_009769","ENSMUSG00000005148","Klf5","4930520J07Rik|Bteb2|CKLF|IKLF","Kruppel-like factor 5","protein-coding"]
[1709,"chr3",84644857,84648016,"+",0,"NA","Intergenic","Intergenic",-19756,"NM_177260",320782,"Mm.107370","NM_177260","ENSMUSG00000056498","Tmem154","9930117H01Rik","transmembrane protein 154","protein-coding"]
[339,"chr10",127922151,127926629,"+",0,"NA","Intergenic","Intergenic",25855,"NM_027301",70061,"Mm.158320","NM_027301","ENSMUSG00000040127","Sdr9c7","1810054F20Rik|Rdh20|Rdhs|SDR-O|Sdro","4short chain dehydrogenase/reductase family 9C, member 7","protein-coding"]
[228,"chr10",18480564,18481797,"+",0,"NA","intron (NM_001163592, intron 2 of 7)","intron (NM_001163592, intron 2 of 7)",11199,"NM_001163592",215819,"Mm.297971","NM_173390","ENSMUSG00000039835","Nhsl1","5730409E15Rik|A630035H13Rik|A730096F01|BC013565|D10Bwg0940e|mKIAA1357","NHS-like 1","protein-coding"]
[749,"chr13",55269359,55269486,"+",0,"NA","intron (NM_008739, intron 9 of 22)","Lx8|LINE|L1",52558,"NM_009000",19336,"Mm.220923","NM_009000","ENSMUSG00000034789","Rab24","6530406O07Rik","RAB24, member RAS oncogene family","protein-coding"]
[268,"chr10",67106697,67106925,"+",0,"NA","Intergenic","Intergenic",-9823,"NM_178606",28193,"Mm.41272","NM_178606","ENSMUSG00000019873","Reep3","D10Ucla1","receptor accessory protein 3","protein-coding"]
[829,"chr14",21088041,21088722,"+",0,"NA","intron (NM_001243041, intron 1 of 10)","intron (NM_001243041, intron 1 of 10)",12229,"NM_001243041",11534,"Mm.188734","NM_134079","ENSMUSG00000039197","Adk","2310026J05Rik|5033405D03Rik|AI255373|AI987814|Ak","adenosine kinase","protein-coding"]
[345,"chr11",5237643,5237816,"+",0,"NA","intron (NM_032396, intron 3 of 8)","B4|SINE|B4",-16869,"NR_037240",100526548,null,"NR_037240","ENSMUSG00000093169","Mir3079","mmu-mir-3079","microRNA 3079","ncRNA"]
[596,"chr12",70910560,70910852,"+",0,"NA","Intergenic","Intergenic",-27151,"NM_019785",56444,"Mm.29317","NM_019785","ENSMUSG00000021076","Actr10","Actr11|Arp11","ARP10 actin-related protein 10","protein-coding"]
[1297,"chr18",36414787,36416600,"+",0,"NA","intron (NM_026027, intron 3 of 3)","intron (NM_026027, intron 3 of 3)",38802,"NM_026027",67199,"Mm.30184","NM_026027","ENSMUSG00000024346","Pfdn1","2700086I23Rik|AA408327|AU044714","prefoldin 1","protein-coding"]
[2090,"chr5",125252329,125252728,"+",0,"NA","Intergenic","Intergenic",-73314,"NM_001253904",20602,"Mm.278646","NM_011424","ENSMUSG00000029478","Ncor2","N-CoR|SMRT|SMRTe","nuclear receptor co-repressor 2","protein-coding"]
[1521,"chr2",59779786,59780482,"+",0,"NA","intron (NM_198294, intron 7 of 26)","intron (NM_198294, intron 7 of 26)",102472,"NM_001159636",72137,"Mm.288734","NM_028118","ENSMUSG00000026988","Wdsub1","1700048E19Rik|2610014F08Rik","WD repeat, SAM and U-box domain containing 1","protein-coding"]
[1862,"chr4",57163658,57163792,"+",0,"NA","Intergenic","B3A|SINE|B2",-8346,"NR_040669",329851,"Mm.392470","NR_040669","ENSMUSG00000085967","Gm12530","D730003B17|OTTMUSG00000007337","predicted gene 12530","ncRNA"]
[2352,"chr7",102399913,102400117,"+",0,"NA","intron (NM_009287, intron 3 of 11)","intron (NM_009287, intron 3 of 11)",-41680,"NM_009103",20133,"Mm.197486","NM_009103","ENSMUSG00000030978","Rrm1","RnrM1","ribonucleotide reductase M1","protein-coding"]
[613,"chr12",77085612,77086108,"+",0,"NA","Intergenic","MLT2B4|LTR|ERVL",-123612,"NM_001146176",17187,"Mm.268548","NM_008558","ENSMUSG00000059436","Max","AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8","Max protein","protein-coding"]
[1082,"chr16",26147255,26147741,"+",0,"NA","Intergenic","ORR1A2|LTR|ERVL-MaLR",-41714,"NM_173379",210530,"Mm.326869","NM_173379",null,"P3h2","4832416N06|AW553532|Leprel1|Mlat4","prolyl 3-hydroxylase 2","protein-coding"]
[1066,"chr16",24173150,24174500,"+",0,"NA","Intergenic","Intergenic",-185213,"NM_009744",12053,"Mm.347398","NM_009744","ENSMUSG00000022508","Bcl6","Bcl5","B cell leukemia/lymphoma 6","protein-coding"]
[121,"chr1",134098727,134101495,"+",0,"NA","Intergenic","MIR|SINE|MIR",-11131,"NM_001284524",71884,"Mm.328268","NM_027979","ENSMUSG00000026450","Chit1","2300002L19Rik","chitinase 1 (chitotriosidase)","protein-coding"]
[952,"chr15",58259109,58259293,"+",0,"NA","Intergenic","Intergenic",-44309,"NM_026346",67731,"Mm.25683","NM_026346","ENSMUSG00000022358","Fbxo32","4833442G10Rik|AI430017|ATROGIN1|Gm20361|MAFbx","F-box protein 32","protein-coding"]
[2691,"chr9",106378486,106378605,"+",0,"NA","Intergenic","Intergenic",9913,"NM_153459",235584,"Mm.275584","NM_153459","ENSMUSG00000053716","Dusp7","AU015694|Mkpx|Pyst2","dual specificity phosphatase 7","protein-coding"]
[1071,"chr16",25483453,25483740,"+",0,"NA","Intergenic","Intergenic",196779,"NM_175165",71338,"Mm.126851","NM_175165","ENSMUSG00000048399","Tprg","5430420C16Rik|Tprg1","transformation related protein 63 regulated","protein-coding"]
[494,"chr11",101102765,101104007,"+",0,"NA","intron (NM_026501, intron 3 of 8)","intron (NM_026501, intron 3 of 8)",-7951,"NM_008949",19183,"Mm.18344","NM_008949",null,"Psmc3ip","C79099|GT198|HOP2|Tbpip","proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein","protein-coding"]
[487,"chr11",100401263,100402743,"+",0,"NA","intron (NR_132425, intron 2 of 3)","intron (NR_132425, intron 2 of 3)",3887,"NR_132425",102635937,"Mm.421398","NR_132425",null,"Gm12348","OTTMUSG00000006271","predicted gene 12348","ncRNA"]
[1956,"chr4",141259789,141260035,"+",0,"NA","Intergenic","PB1D10|SINE|Alu",17028,"NM_172520",213649,"Mm.134460","NM_172520","ENSMUSG00000028919","Arhgef19","6030432F23|6430573B13Rik|WGEF","Rho guanine nucleotide exchange factor (GEF) 19","protein-coding"]
[2235,"chr6",131396983,131397748,"+",0,"NA","Intergenic","Lx8|LINE|L1",-8915,"NM_011733",56449,"Mm.458000","NM_011733","ENSMUSG00000030189","Ybx3","Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR","Y box protein 3","protein-coding"]
[238,"chr10",21845287,21850046,"+",0,"NA","Intergenic","Intergenic",-34518,"NM_001161845",20393,"Mm.28405","NM_011361","ENSMUSG00000019970","Sgk1","Sgk","serum/glucocorticoid regulated kinase 1","protein-coding"]
[873,"chr14",74881198,74881335,"+",0,"NA","intron (NM_001252132, intron 1 of 18)","intron (NM_001252132, intron 1 of 18)",66611,"NM_001252132",380916,"Mm.288868","NM_001033439","ENSMUSG00000068015","Lrch1","4832412D13Rik|AI552548|AW215503|Chdc1|mKIAA1016","leucine-rich repeats and calponin homology (CH) domain containing 1","protein-coding"]
[253,"chr10",44137587,44138642,"+",0,"NA","Intergenic","Intergenic",-32333,"NR_001582",70365,"Mm.87073","NR_001582",null,"Speer5-ps1","1700007C10Rik|SPEER-5|Speer5-ps","spermatogenesis associated glutamate (E)-rich protein 5, pseudogene 1","pseudo"]
[448,"chr11",94337280,94338282,"+",0,"NA","intron (NM_027799, intron 3 of 4)","intron (NM_027799, intron 3 of 4)",9780,"NM_146024",71452,"Mm.141054","NM_027799","ENSMUSG00000020864","Ankrd40","1110011C06Rik|5530600A18Rik|Gcap15","ankyrin repeat domain 40","protein-coding"]
[2631,"chr9",70848027,70848853,"+",0,"NA","intron (NM_008280, intron 1 of 8)","intron (NM_008280, intron 1 of 8)",86368,"NM_008280",15450,"Mm.390187","NM_008280","ENSMUSG00000032207","Lipc","AI256194|HL|Hpl","lipase, hepatic","protein-coding"]
[2278,"chr7",28848534,28849644,"+",0,"NA","Intergenic","Intergenic",14907,"NM_010707",16857,"Mm.210336","NM_010707",null,"Lgals6","galectin-6","lectin, galactose binding, soluble 6","protein-coding"]
[2427,"chr8",26812568,26813118,"+",0,"NA","Intergenic","Intergenic",11580,"NR_045904",72316,"Mm.490534","NR_045904","ENSMUSG00000100335","2310008N11Rik","-","RIKEN cDNA 2310008N11 gene","ncRNA"]
[63,"chr1",82795623,82795848,"+",0,"NA","Intergenic","MTEb|LTR|ERVL-MaLR",-27279,"NM_025453",66261,"Mm.46325","NM_025453","ENSMUSG00000026149","Tm4sf20","1810018L02Rik","transmembrane 4 L six family member 20","protein-coding"]
[1637,"chr2",160729014,160729401,"+",0,"NA","Intergenic","Intergenic",-2103,"NM_021280",18803,"Mm.44463","NM_021280","ENSMUSG00000016933","Plcg1","AI894140|Cded|Plc-1|Plc-gamma1|Plcg-1","phospholipase C, gamma 1","protein-coding"]
[179,"chr1",172441603,172442639,"+",0,"NA","Intergenic","Intergenic",-33239,"NM_029612",98365,"Mm.150050","NM_029612","ENSMUSG00000026548","Slamf9","2310026I04Rik|AI462096|CD2F-10|CD84-H1|Cd2f10|SF2001","SLAM family member 9","protein-coding"]
[1532,"chr2",70838428,70838624,"+",0,"NA","Intergenic","GA-rich|Low_complexity|Low_complexity",-13046,"NM_172664",228012,"Mm.136511","NM_172664","ENSMUSG00000041997","Tlk1","4930545J15Rik","tousled-like kinase 1","protein-coding"]
[1105,"chr16",49937629,49937739,"+",0,"NA","Intergenic","Intergenic",-42776,"NR_045001",628951,"Mm.428032","NR_045001",null,"Gm6936","-","predicted gene 6936","ncRNA"]
[713,"chr13",38160476,38162632,"+",0,"NA","intron (NM_023842, intron 1 of 23)","IMPB_01|Satellite|Satellite",10260,"NM_023842",109620,"Mm.355327","NM_023842","ENSMUSG00000054889","Dsp","2300002E22Rik|5730453H04Rik|AA407887|AA407888|AW109828|DP|rul","desmoplakin","protein-coding"]
[1334,"chr18",65616078,65616269,"+",0,"NA","intron (NM_207255, intron 2 of 5)","intron (NM_207255, intron 2 of 5)",3442,"NR_105742",100526497,null,"NR_105742","ENSMUSG00000077113","Mir466p","mmu-mir-466p","microRNA 466p","ncRNA"]
[2499,"chr8",106610176,106611337,"+",0,"NA","intron (NM_009864, intron 2 of 15)","PB1D9|SINE|Alu",7406,"NM_009864",12550,"Mm.35605","NM_009864","ENSMUSG00000000303","Cdh1","AA960649|ARC-1|E-cad|Ecad|L-CAM|UVO|Um","cadherin 1","protein-coding"]
[2096,"chr5",137374290,137374419,"+",0,"NA","3' UTR (NM_010144, exon 17 of 17)","3' UTR (NM_010144, exon 17 of 17)",24245,"NM_010144",13846,"Mm.34533","NM_010144","ENSMUSG00000029710","Ephb4","AI042935|Htk|MDK2|Myk1|Tyro11","Eph receptor B4","protein-coding"]
[1784,"chr3",117068052,117068830,"+",0,"NA","intron (NR_038029, intron 3 of 8)","B3A|SINE|B2",9324,"NR_038029",433646,"Mm.158997","NR_038029","ENSMUSG00000028009","1700061I17Rik","-","RIKEN cDNA 1700061I17 gene","ncRNA"]
[938,"chr15",37124000,37124166,"+",0,"NA","Intergenic","Intergenic",-108953,"NM_026496",252973,"Mm.244612","NM_026496","ENSMUSG00000022286","Grhl2","0610015A08Rik|BOM|Tcfcp2l3","grainyhead-like 2 (Drosophila)","protein-coding"]
[2149,"chr6",51079508,51079639,"+",0,"NA","Intergenic","Intergenic",190337,"NR_029719",387166,null,"NR_029719","ENSMUSG00000065505","Mir148a","Mirn148|Mirn148a|mir-148a","microRNA 148a","ncRNA"]
[1679,"chr3",38373289,38373485,"+",0,"NA","Intergenic","Intergenic",111429,"NM_001167883",99696,"Mm.290937","NM_001033198","ENSMUSG00000044864","Ankrd50","AI662170|E430012K20Rik|mKIAA1223|mKIAA3019","ankyrin repeat domain 50","protein-coding"]
[1830,"chr4",20193960,20194979,"+",0,"NA","intron (NM_001290410, intron 4 of 5)","intron (NM_001290410, intron 4 of 5)",152417,"NM_010281",14590,"Mm.20461","NM_010281",null,"Ggh","gamma-GH","gamma-glutamyl hydrolase","protein-coding"]
[1620,"chr2",148634325,148635044,"+",0,"NA","Intergenic","Intergenic",-37931,"NM_019761",56488,"Mm.34663","NM_019761","ENSMUSG00000036992","Nxt1","1110001N02Rik","NTF2-related export protein 1","protein-coding"]
[2241,"chr6",135295090,135296849,"+",0,"NA","Intergenic","Intergenic",14415,"NM_029595",76400,"Mm.293018","NM_029595","ENSMUSG00000047104","Pbp2","1700023A18Rik|AI326308|Pebp-2|Pebp2","phosphatidylethanolamine binding protein 2","protein-coding"]
[1262,"chr17",87616270,87618016,"+",0,"NA","Intergenic","Intergenic",-18836,"NM_008532",17075,"Mm.4259","NM_008532","ENSMUSG00000045394","Epcam","CD326|EGP|EGP-2|Egp314|Ep-CAM|EpCAM1|GA733-2|Ly74|TROP1|Tacsd1|Tacstd1|gp40","epithelial cell adhesion molecule","protein-coding"]
[1290,"chr18",32726736,32727000,"+",0,"NA","intron (NR_045381, intron 4 of 4)","MLT1O|LTR|ERVL-MaLR",-88515,"NM_021367",53603,"Mm.143716","NM_021367","ENSMUSG00000024379","Tslp","-","thymic stromal lymphopoietin","protein-coding"]
[1527,"chr2",60876926,60877318,"+",0,"NA","intron (NM_020296, intron 1 of 13)","intron (NM_020296, intron 1 of 13)",4316,"NM_001141932",56878,"Mm.259667","NM_020296","ENSMUSG00000026970","Rbms1","2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1","RNA binding motif, single stranded interacting protein 1","protein-coding"]
[2162,"chr6",66910188,66911593,"+",0,"NA","intron (NM_001177558, intron 1 of 4)","intron (NM_001177558, intron 1 of 4)",13999,"NM_001177558",14701,"Mm.234342","NM_025278","ENSMUSG00000036402","Gng12","2010305F15Rik|AA536815|AI115529|AI314170|AI842738","guanine nucleotide binding protein (G protein), gamma 12","protein-coding"]
[1132,"chr16",85042001,85042121,"+",0,"NA","intron (NM_001198823, intron 7 of 17)","intron (NM_001198823, intron 7 of 17)",69850,"NR_045889",100038614,"Mm.441351","NR_045889",null,"Gm10791","ENSMUSG00000074933","predicted gene 10791","ncRNA"]
[2370,"chr7",120875480,120876465,"+",0,"NA","intron (NM_001267711, intron 3 of 17)","intron (NM_001267711, intron 3 of 17)",24783,"NM_001267711",13631,"Mm.25997","NM_007908","ENSMUSG00000035064","Eef2k","C86191|eEF-2K","eukaryotic elongation factor-2 kinase","protein-coding"]
[929,"chr15",36688182,36689070,"+",0,"NA","Intergenic","Intergenic",-79653,"NM_008774",18458,"Mm.371570","NM_008774","ENSMUSG00000022283","Pabpc1","PABP|Pabp1|PabpI|Pabpl1|ePAB","poly(A) binding protein, cytoplasmic 1","protein-coding"]
[2554,"chr9",31218072,31218327,"+",0,"NA","Intergenic","Intergenic",-6384,"NM_001102456",11804,"Mm.19133","NM_009691","ENSMUSG00000031996","Aplp2","AI790698|APLP-2","amyloid beta (A4) precursor-like protein 2","protein-coding"]
[1925,"chr4",129257348,129257589,"+",0,"NA","intron (NM_001285867, intron 1 of 6)","intron (NM_001285867, intron 1 of 6)",3936,"NM_001285867",97130,"Mm.331907","NM_001033189","ENSMUSG00000050390","C77080","Kiaa1522|mKIAA1522","expressed sequence C77080","protein-coding"]
[2574,"chr9",43318165,43319645,"+",0,"NA","intron (NM_023655, intron 1 of 8)","intron (NM_023655, intron 1 of 8)",8142,"NM_023655",72169,"Mm.273277","NM_023655","ENSMUSG00000032013","Trim29","1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726","tripartite motif-containing 29","protein-coding"]
[547,"chr12",24534973,24540177,"+",0,"NA","intron (NM_020614, intron 8 of 14)","intron (NM_020614, intron 8 of 14)",-34712,"NM_001161406",195733,"Mm.263068","NM_145890","ENSMUSG00000020656","Grhl1","LBP-32|MGR|Tcfcp2l2","grainyhead-like 1 (Drosophila)","protein-coding"]
[631,"chr12",83998065,83998199,"+",0,"NA","Intergenic","Intergenic",10271,"NM_134188",171210,"Mm.371675","NM_134188","ENSMUSG00000021226","Acot2","AA571646|MTE-I|Mte1","acyl-CoA thioesterase 2","protein-coding"]
[1616,"chr2",146572347,146572589,"+",0,"NA","Intergenic","B3|SINE|B2",29537,"NR_040502",74065,"Mm.399508","NR_040502","ENSMUSG00000085796","4933406D12Rik","-","RIKEN cDNA 4933406D12 gene","ncRNA"]
[1583,"chr2",120141717,120141995,"+",0,"NA","intron (NM_133838, intron 1 of 5)","RSINE1|SINE|B4",12719,"NM_133838",98878,"Mm.132226","NM_133838","ENSMUSG00000027293","Ehd4","2210022F10Rik|AI197390|AI846352|AV006278|Past2","EH-domain containing 4","protein-coding"]
[1544,"chr2",79537431,79539053,"+",0,"NA","Intergenic","Intergenic",-81606,"NM_010894",18012,"Mm.4636","NM_010894","ENSMUSG00000034701","Neurod1","BETA2|BHF-1|Neurod|bHLHa3","neurogenic differentiation 1","protein-coding"]
[1538,"chr2",73020544,73020717,"+",0,"NA","Intergenic","L1MC1|LINE|L1",-40184,"NM_001018042",20687,"Mm.124328","NM_011450","ENSMUSG00000027109","Sp3","D130027J01Rik","trans-acting transcription factor 3","protein-coding"]
[396,"chr11",61224526,61226047,"+",0,"NA","Intergenic","Intergenic",16544,"NM_001112725",11670,"Mm.4257","NM_007436","ENSMUSG00000019102","Aldh3a1","Ahd-4|Ahd4|Aldh|Aldh3","aldehyde dehydrogenase family 3, subfamily A1","protein-coding"]
[258,"chr10",59240565,59241132,"+",0,"NA","Intergenic","B1_Mus1|SINE|Alu",18926,"NM_172939",268301,"Mm.3036","NM_172939","ENSMUSG00000098188","Sowahc","4921515A04Rik|9430099J10Rik|Ankrd57|C820004L04Rik","sosondowah ankyrin repeat domain family member C","protein-coding"]
[1422,"chr19",47415458,47416925,"+",0,"NA","intron (NM_008018, intron 2 of 14)","intron (NM_008018, intron 2 of 14)",48220,"NM_001164717",14218,"Mm.127560","NM_008018","ENSMUSG00000053617","Sh3pxd2a","2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5","SH3 and PX domains 2A","protein-coding"]
[482,"chr11",99405967,99406184,"+",0,"NA","Intergenic","Intergenic",16184,"NM_010661",268482,"Mm.436651","NM_010661","ENSMUSG00000020912","Krt12","AI835216|K12|Krt-12|Krt1-12","keratin 12","protein-coding"]
[2620,"chr9",70252096,70252380,"+",0,"NA","intron (NM_181072, intron 1 of 27)","intron (NM_181072, intron 1 of 27)",44888,"NM_181072",71602,"Mm.249311","NM_181072","ENSMUSG00000032220","Myo1e","2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3","myosin IE","protein-coding"]
[949,"chr15",55197445,55198597,"+",0,"NA","intron (NM_145470, intron 4 of 8)","RLTR33|LTR|ERVK",64585,"NM_001037937",97998,"Mm.295397","NM_145470","ENSMUSG00000022419","Deptor","Depdc6","DEP domain containing MTOR-interacting protein","protein-coding"]
[499,"chr11",103381170,103383058,"+",0,"NA","intron (NM_183034, intron 5 of 11)","intron (NM_183034, intron 5 of 11)",-18422,"NM_001205236",544817,"Mm.259113","NM_133715","ENSMUSG00000034255","Arhgap27","2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20","Rho GTPase activating protein 27","protein-coding"]
[1047,"chr16",14373349,14373695,"+",0,"NA","intron (NM_008576, intron 1 of 30)","intron (NM_008576, intron 1 of 30)",11964,"NM_008576",17250,"Mm.196634","NM_008576","ENSMUSG00000023088","Abcc1","Abcc1a|Abcc1b|MRP|Mdrap|Mrp1","ATP-binding cassette, sub-family C (CFTR/MRP), member 1","protein-coding"]
[2138,"chr6",38095631,38096968,"+",0,"NA","intron (NM_080467, intron 1 of 20)","intron (NM_080467, intron 1 of 20)",-13054,"NM_029921",77522,"Mm.387207","NM_029921","ENSMUSG00000029829","Tmem213","D630002J15Rik","transmembrane protein 213","protein-coding"]
[1055,"chr16",21225748,21227785,"+",0,"NA","Intergenic","Intergenic",21971,"NM_010143",13845,"Mm.6972","NM_010143","ENSMUSG00000005958","Ephb3","AW456895|Cek10|Etk2|HEK2|MDK5|Sek4|Tyro6","Eph receptor B3","protein-coding"]
[2447,"chr8",68375320,68376695,"+",0,"NA","TTS (NR_038181)","TTS (NR_038181)",7548,"NR_038181",73609,"Mm.443247","NR_038181","ENSMUSG00000085197","1700125H03Rik","4930510D22Rik","RIKEN cDNA 1700125H03 gene","ncRNA"]
[1276,"chr18",12004258,12004886,"+",0,"NA","intron (NM_001289666, intron 13 of 14)","intron (NM_001289666, intron 13 of 14)",116965,"NR_110356",338363,"Mm.271567","NM_178801","ENSMUSG00000049411","Tmem241","6030446N20Rik","transmembrane protein 241","protein-coding"]
[141,"chr1",136317273,136317573,"+",0,"NA","intron (NM_001081360, intron 2 of 18)","intron (NM_001081360, intron 2 of 18)",28681,"NM_001081360",67886,"Mm.144143","NM_001081360","ENSMUSG00000041570","Camsap2","1600013L13Rik|4930541M15Rik|Camsap1l1|mKIAA1078","calmodulin regulated spectrin-associated protein family, member 2","protein-coding"]
[909,"chr14",120296826,120297285,"+",0,"NA","intron (NM_175341, intron 1 of 8)","intron (NM_175341, intron 1 of 8)",21386,"NM_175341",105559,"Mm.238266","NM_175341","ENSMUSG00000022139","Mbnl2","1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072","muscleblind-like 2","protein-coding"]
[2618,"chr9",70210850,70210960,"+",0,"NA","intron (NM_181072, intron 1 of 27)","intron (NM_181072, intron 1 of 27)",3555,"NM_181072",71602,"Mm.249311","NM_181072","ENSMUSG00000032220","Myo1e","2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3","myosin IE","protein-coding"]
[1124,"chr16",77499918,77501546,"+",0,"NA","intron (NR_015543, intron 3 of 4)","intron (NR_015543, intron 3 of 4)",-98204,"NR_029535",387229,null,"NR_029535","ENSMUSG00000065530","Mir99a","Mirn99a|mir-99a|mmu-mir-99a","microRNA 99a","ncRNA"]
[1230,"chr17",65913760,65913908,"+",0,"NA","Intergenic","Intergenic",-28079,"NM_009067",19765,"Mm.17009","NM_009067","ENSMUSG00000024096","Ralbp1","RLIP76|Rip1","ralA binding protein 1","protein-coding"]
[75,"chr1",87551611,87551729,"+",0,"NA","intron (NM_001111314, intron 1 of 14)","intron (NM_001111314, intron 1 of 14)",22200,"NM_001111314",53972,"Mm.435439","NM_019867","ENSMUSG00000026259","Ngef","Tims2|ephexin","neuronal guanine nucleotide exchange factor","protein-coding"]
[2588,"chr9",45217015,45217403,"+",0,"NA","intron (NM_001198971, intron 1 of 4)","intron (NM_001198971, intron 1 of 4)",-13134,"NM_145403",214523,"Mm.436756","NM_145403","ENSMUSG00000032091","Tmprss4","mCAP2","transmembrane protease, serine 4","protein-coding"]
[1917,"chr4",128811750,128811967,"+",0,"NA","Intergenic","Intergenic",-5746,"NM_001081098",230761,"Mm.22616","NM_001081098","ENSMUSG00000028799","Zfp362","-","zinc finger protein 362","protein-coding"]
[1163,"chr17",5994917,5995049,"+",0,"NA","intron (NM_001113351, intron 3 of 24)","intron (NM_001113351, intron 3 of 24)",-12597,"NM_001290698",20975,"Mm.236068","NM_011523","ENSMUSG00000023805","Synj2","AI481647|SJ2|mKIAA0348","synaptojanin 2","protein-coding"]
[450,"chr11",94538346,94539350,"+",0,"NA","TTS (NM_001013381)","TTS (NM_001013381)",10359,"NM_001013381",237926,"Mm.342275","NM_001013381","ENSMUSG00000039096","Rsad1","B430319G23|BC056485","radical S-adenosyl methionine domain containing 1","protein-coding"]
[1702,"chr3",65557192,65558732,"+",0,"NA","Intergenic","MLT1D|LTR|ERVL-MaLR",-28548,"NR_027955",71004,"Mm.475465","NM_001033527","ENSMUSG00000074580","4931440P22Rik","-","RIKEN cDNA 4931440P22 gene","ncRNA"]
[1405,"chr19",34051978,34052683,"+",0,"NA","Intergenic","Intergenic",-15028,"NM_027340",70166,"Mm.75602","NM_027340","ENSMUSG00000024770","Lipn","2210418G03Rik|Lipl4","lipase, family member N","protein-coding"]
[1713,"chr3",85931519,85932266,"+",0,"NA","Intergenic","Intergenic",-44374,"NM_177130",320302,"Mm.482978","NM_177130","ENSMUSG00000031286","Glt28d2","4732486J07Rik|Glt28d1l","glycosyltransferase 28 domain containing 2","protein-coding"]
[1060,"chr16",23980780,23981307,"+",0,"NA","intron (NM_009744, intron 1 of 9)","intron (NM_009744, intron 1 of 9)",7569,"NM_009744",12053,"Mm.347398","NM_009744","ENSMUSG00000022508","Bcl6","Bcl5","B cell leukemia/lymphoma 6","protein-coding"]
[2420,"chr8",24419156,24420195,"+",0,"NA","Intergenic","Intergenic",19271,"NM_026931",69068,"Mm.25775","NM_026931",null,"1810011O10Rik","1110065B09Rik|AW121743|AW321058","RIKEN cDNA 1810011O10 gene","protein-coding"]
[2104,"chr5",144288648,144291561,"+",0,"NA","intron (NM_025833, intron 3 of 13)","(GA)n|Simple_repeat|Simple_repeat",13043,"NR_040432",100504231,"Mm.441035","NR_040432","ENSMUSG00000086894","Gm15708","OTTMUSG00000025583","predicted gene 15708","ncRNA"]
[2126,"chr6",18809847,18811411,"+",0,"NA","Intergenic","Intergenic",-38006,"NM_133939",76522,"Mm.275158","NM_133939","ENSMUSG00000044155","Lsm8","2010003I05Rik|AW214405|Naa38","LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)","protein-coding"]
[900,"chr14",105267391,105267783,"+",0,"NA","intron (NM_001190989, intron 1 of 7)","B3A|SINE|B2",8914,"NM_001190989",76273,"Mm.290669","NM_029561","ENSMUSG00000053253","Ndfip2","0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165","Nedd4 family interacting protein 2","protein-coding"]
[318,"chr10",97312750,97313738,"+",0,"NA","Intergenic","Intergenic",-110234,"NR_039547",100628616,null,"NR_039547","ENSMUSG00000105557","Mir3966","mmu-mir-3966|mu-mir-3966","microRNA 3966","ncRNA"]
[1729,"chr3",89887599,89888673,"+",0,"NA","intron (NM_001310676, intron 3 of 9)","MER44D|DNA|TcMar-Tigger",25060,"NM_001310676",16194,"Mm.2856","NM_010559","ENSMUSG00000027947","Il6ra","CD126|IL-6R|IL-6R-alpha|IL-6RA|Il6r","interleukin 6 receptor, alpha","protein-coding"]
[2526,"chr8",124080820,124083373,"+",0,"NA","Intergenic","RMER15|LTR|ERVL",58623,"NM_001029876",382038,"Mm.334891","NM_001029876","ENSMUSG00000031976","Urb2","C77575|mKIAA0133","URB2 ribosome biogenesis 2 homolog (S. cerevisiae)","protein-coding"]
[972,"chr15",62078637,62079798,"+",0,"NA","intron (NR_132746, intron 1 of 6)","intron (NR_132746, intron 1 of 6)",39960,"NR_132746",19296,"Mm.4608","NM_011222","ENSMUSG00000097039","Pvt1","Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1","plasmacytoma variant translocation 1","ncRNA"]
[473,"chr11",98934297,98934417,"+",0,"NA","Intergenic","Intergenic",-3339,"NM_009024",19401,"Mm.439744","NM_009024","ENSMUSG00000037992","Rara","Nr1b1|RAR|RARalpha1","retinoic acid receptor, alpha","protein-coding"]
[2572,"chr9",43315176,43315602,"+",0,"NA","intron (NM_023655, intron 1 of 8)","intron (NM_023655, intron 1 of 8)",4626,"NM_023655",72169,"Mm.273277","NM_023655","ENSMUSG00000032013","Trim29","1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726","tripartite motif-containing 29","protein-coding"]
[1774,"chr3",108424064,108424436,"+",0,"NA","TTS (NM_001204979)","TTS (NM_001204979)",-8756,"NM_001004177",53883,"Mm.39728","NM_017392","ENSMUSG00000068740","Celsr2","Adgrc2|EGFL2|Flamingo1|flamingo|mKIAA0279|mfmi1","cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)","protein-coding"]
[3,"chr1",13307411,13309584,"+",0,"NA","intron (NM_008678, intron 1 of 22)","intron (NM_008678, intron 1 of 22)",63932,"NM_001302702",17978,"Mm.2537","NM_008678","ENSMUSG00000005886","Ncoa2","D1Ertd433e|GRIP-1|Grip1|KAT13C|NCoA-2|SRC-2|TIF2|bHLHe75","nuclear receptor coactivator 2","protein-coding"]
[248,"chr10",40337859,40339735,"+",0,"NA","Intergenic","RLTR26_Mus|LTR|ERVK",-10511,"NM_001291817",78334,"Mm.200924","NM_198164","ENSMUSG00000038481","Cdk19","2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028","cyclin-dependent kinase 19","protein-coding"]
[146,"chr1",138642791,138642901,"+",0,"NA","intron (NR_040304, intron 4 of 4)","intron (NR_040304, intron 4 of 4)",-23089,"NM_001311148",59125,"Mm.143817","NM_021605","ENSMUSG00000026393","Nek7","2810460C19Rik|AU020186","NIMA (never in mitosis gene a)-related expressed kinase 7","protein-coding"]
[1351,"chr18",84879593,84881476,"+",0,"NA","TTS (NM_025797)","TTS (NM_025797)",29120,"NM_025797",109672,"Mm.31018","NM_025797",null,"Cyb5a","0610009N12Rik|Cyb5","cytochrome b5 type A (microsomal)","protein-coding"]
[2396,"chr7",141046464,141047738,"+",0,"NA","Intergenic","Intergenic",-14173,"NM_177897",330671,"Mm.133741","NM_177897","ENSMUSG00000055629","B4galnt4","BC038881|Gm1095|beta4GalNAcT4","beta-1,4-N-acetyl-galactosaminyl transferase 4","protein-coding"]
[356,"chr11",20869864,20870013,"+",0,"NA","Intergenic","Intergenic",-38830,"NM_173752",216551,"Mm.76694","NM_173752","ENSMUSG00000042363","Lgalsl","1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla","lectin, galactoside binding-like","protein-coding"]
[802,"chr13",108228951,108229578,"+",0,"NA","intron (NM_029001, intron 1 of 7)","intron (NM_029001, intron 1 of 7)",14860,"NM_029001",74559,"Mm.286127","NM_029001","ENSMUSG00000021696","Elovl7","9130013K24Rik|AI840082","ELOVL family member 7, elongation of long chain fatty acids (yeast)","protein-coding"]
[2720,"chr9",122110973,122111324,"+",0,"NA","Intergenic","Lx2|LINE|L1",-6118,"NM_001164572",20623,"Mm.257989","NM_133741","ENSMUSG00000038145","Snrk","2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096","SNF related kinase","protein-coding"]
[2063,"chr5",115007979,115009204,"+",0,"NA","Intergenic","Intergenic",-2933,"NM_029012",74585,"Mm.355894","NM_029012","ENSMUSG00000029550","Sppl3","4833416I09Rik|Psl4|Usmg3","signal peptide peptidase 3","protein-coding"]
[528,"chr11",119975481,119976191,"+",0,"NA","intron (NM_130862, intron 3 of 13)","intron (NM_130862, intron 3 of 13)",32744,"NM_130862",108100,"Mm.197534","NM_130862","ENSMUSG00000025372","Baiap2","IRSp53|R75030","brain-specific angiogenesis inhibitor 1-associated protein 2","protein-coding"]
[164,"chr1",160249821,160251148,"+",0,"NA","intron (NM_001038621, intron 3 of 8)","intron (NM_001038621, intron 3 of 8)",-37592,"NM_009786",12301,"Mm.10702","NM_009786","ENSMUSG00000014226","Cacybp","SIP","calcyclin binding protein","protein-coding"]
[807,"chr13",111796820,111796977,"+",0,"NA","intron (NM_011945, intron 1 of 19)","intron (NM_011945, intron 1 of 19)",12085,"NM_011945",26401,"Mm.15918","NM_011945","ENSMUSG00000021754","Map3k1","MAPKKK1|MEKK1|Mekk","mitogen-activated protein kinase kinase kinase 1","protein-coding"]
[2040,"chr5",73400585,73402125,"+",0,"NA","Intergenic","MTEb|LTR|ERVL-MaLR",-4723,"NM_181323",231293,"Mm.280211","NM_181323","ENSMUSG00000029154","Cwh43","C130090K23Rik|imds-60","cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)","protein-coding"]
[2678,"chr9",100505968,100507190,"+",0,"NA","intron (NM_010878, intron 2 of 3)","intron (NM_010878, intron 2 of 3)",-20106,"NM_001033543",213208,"Mm.242896","NM_001033543","ENSMUSG00000044244","Il20rb","AV228068|Fndc6|Gm186|Il20R2","interleukin 20 receptor beta","protein-coding"]
[2632,"chr9",70888290,70890348,"+",0,"NA","intron (NM_008280, intron 1 of 8)","intron (NM_008280, intron 1 of 8)",45489,"NM_008280",15450,"Mm.390187","NM_008280","ENSMUSG00000032207","Lipc","AI256194|HL|Hpl","lipase, hepatic","protein-coding"]
[1049,"chr16",15113447,15116108,"+",0,"NA","Intergenic","Intergenic",208131,"NM_025769",66793,"Mm.100270","NM_025769",null,"Efcab1","4930449A16Rik|5430404L10Rik","EF hand calcium binding domain 1","protein-coding"]
[882,"chr14",99598725,99599733,"+",0,"NA","Intergenic","Intergenic",300538,"NM_009769",12224,"Mm.30262","NM_009769","ENSMUSG00000005148","Klf5","4930520J07Rik|Bteb2|CKLF|IKLF","Kruppel-like factor 5","protein-coding"]
[1050,"chr16",18195475,18195622,"+",0,"NA","Intergenic","Intergenic",17985,"NR_027843",66779,"Mm.387525","NR_015575",null,"4933432I09Rik","-","RIKEN cDNA 4933432I09 gene","ncRNA"]
[1488,"chr2",32470041,32470673,"+",0,"NA","Intergenic","B1_Mur4|SINE|Alu",-18887,"NM_146118",227731,"Mm.37395","NM_146118","ENSMUSG00000026819","Slc25a25","1110030N17Rik|MCSC|mKIAA1896","solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25","protein-coding"]
[560,"chr12",40347826,40348229,"+",0,"NA","intron (NM_178845, intron 4 of 11)","intron (NM_178845, intron 4 of 11)",97763,"NM_172575",246196,"Mm.26852","NM_172575","ENSMUSG00000055917","Zfp277","2410017E24Rik|NIRF4","zinc finger protein 277","protein-coding"]
[798,"chr13",102880915,102881229,"+",0,"NA","intron (NM_175171, intron 4 of 28)","intron (NM_175171, intron 4 of 28)",120817,"NR_130171",76624,"Mm.426384","NR_130171","ENSMUSG00000091906","1700099I09Rik","-","RIKEN cDNA 1700099I09 gene","ncRNA"]
[898,"chr14",105250599,105250968,"+",0,"NA","Intergenic","Intergenic",-7890,"NM_029561",76273,"Mm.290669","NM_029561","ENSMUSG00000053253","Ndfip2","0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165","Nedd4 family interacting protein 2","protein-coding"]
[2725,"chr9",123201681,123201882,"+",0,"NA","intron (NM_133974, intron 1 of 8)","intron (NM_133974, intron 1 of 8)",14257,"NM_133974",109332,"Mm.27519","NM_133974","ENSMUSG00000035498","Cdcp1","9030022E12Rik|AA409659|E030027H19Rik","CUB domain containing protein 1","protein-coding"]
[1031,"chr15",101372911,101373123,"+",0,"NA","Intergenic","Intergenic",-2892,"NM_028770",74127,"Mm.440055","NM_028770","ENSMUSG00000037185","Krt80","1200016G03Rik|2310041I20Rik|Kb20","keratin 80","protein-coding"]
[1273,"chr18",7614023,7614179,"+",0,"NA","intron (NM_001161620, intron 1 of 12)","intron (NM_001161620, intron 1 of 12)",12762,"NM_001081287",75739,"Mm.133293","NM_001081287","ENSMUSG00000057440","Mpp7","1110068J02Rik|2810038M04Rik|5430426E14Rik|AI415104|Gm955","membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)","protein-coding"]
[2516,"chr8",120109966,120110249,"+",0,"NA","Intergenic","MLT1K|LTR|ERVL-MaLR",-4045,"NM_001163762",234797,"Mm.101958","NM_172286","ENSMUSG00000031824","6430548M08Rik","AW049007|Kiaa0513|mKIAA0513","RIKEN cDNA 6430548M08 gene","protein-coding"]
[451,"chr11",95097614,95097724,"+",0,"NA","Intergenic","Intergenic",-20858,"NM_001306162",16400,"Mm.57035","NM_013565","ENSMUSG00000001507","Itga3","AA407068|CD49C|GAPB3","integrin alpha 3","protein-coding"]
[2616,"chr9",69442497,69444692,"+",0,"NA","Intergenic","Intergenic",-10089,"NM_007585",12306,"Mm.238343","NM_007585","ENSMUSG00000032231","Anxa2","AW215814|Cal1h","annexin A2","protein-coding"]
[454,"chr11",95777226,95777655,"+",0,"NA","Intergenic","Intergenic",28373,"NM_201609",268469,"Mm.389038","NM_201609","ENSMUSG00000075595","Zfp652","9530033F24Rik|ZNF652","zinc finger protein 652","protein-coding"]
[2538,"chr8",127439875,127441130,"+",0,"NA","intron (NM_001309391, intron 20 of 24)","intron (NM_001309391, intron 20 of 24)",140850,"NM_001013580",93742,"Mm.299254","NM_033620","ENSMUSG00000025812","Pard3","AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip","par-3 family cell polarity regulator","protein-coding"]
[1364,"chr19",7311246,7311781,"+",0,"NA","intron (NM_001080388, intron 1 of 16)","intron (NM_001080388, intron 1 of 16)",-16066,"NM_001080390",13728,"Mm.258986","NM_007928","ENSMUSG00000024969","Mark2","EMK-1|Emk|Par-1|Par-1b","MAP/microtubule affinity regulating kinase 2","protein-coding"]
[1408,"chr19",37104714,37105495,"+",0,"NA","intron (NM_001290829, intron 4 of 9)","intron (NM_001290829, intron 4 of 9)",-68739,"NR_045329",319931,"Mm.446730","NR_045329","ENSMUSG00000097591","A330032B11Rik","-","RIKEN cDNA A330032B11 gene","ncRNA"]
[2448,"chr8",69037159,69039248,"+",0,"NA","3' UTR (NM_153054, exon 17 of 17)","3' UTR (NM_153054, exon 17 of 17)",-50533,"NM_007509",11966,"Mm.249096","NM_007509","ENSMUSG00000006273","Atp6v1b2","AI194269|AI790362|Atp6b2|HO57|R74844","ATPase, H+ transporting, lysosomal V1 subunit B2","protein-coding"]
[634,"chr12",84175843,84176180,"+",0,"NA","intron (NM_001163501, intron 1 of 12)","intron (NM_001163501, intron 1 of 12)",18004,"NM_001163502",238317,"Mm.31256","NM_001163501","ENSMUSG00000042507","Elmsan1","9430029N19Rik|C130039O16Rik|Gm260","ELM2 and Myb/SANT-like domain containing 1","protein-coding"]
[2721,"chr9",122401170,122401567,"+",0,"NA","Intergenic","Intergenic",-2567,"NR_045967",654800,"Mm.393956","NR_045967",null,"A730085K08Rik","-","RIKEN cDNA A730085K08 gene","ncRNA"]
[578,"chr12",69537012,69539412,"+",0,"NA","Intergenic","Intergenic",44816,"NM_001033236",207965,"Mm.102487","NM_001033236","ENSMUSG00000049882","Vcpkmt","Gm71|Mettl21d|Mettl221d|VCP-KMT","valosin containing protein lysine (K) methyltransferase","protein-coding"]
[2551,"chr9",21854027,21855944,"+",0,"NA","Intergenic","Intergenic",-2350,"NM_177030",319899,"Mm.128153","NM_177030","ENSMUSG00000032198","Dock6","2410095B20Rik|4931431C02Rik|C330023D02Rik|mKIAA1395","dedicator of cytokinesis 6","protein-coding"]
[695,"chr13",34207844,34208153,"+",0,"NA","intron (NM_001033167, intron 4 of 10)","intron (NM_001033167, intron 4 of 10)",45034,"NM_001110515",69666,"Mm.24788","NM_001101430","ENSMUSG00000071451","Psmg4","PAC-4|mPAC4","proteasome (prosome, macropain) assembly chaperone 4","protein-coding"]
[978,"chr15",77191660,77193155,"+",0,"NA","intron (NM_175387, intron 2 of 12)","intron (NM_175387, intron 2 of 12)",-38595,"NM_001286418",93686,"Mm.202774","NM_053104","ENSMUSG00000033565","Rbfox2","Fbm2|Fxh|Hrnbp2|Rbm9","RNA binding protein, fox-1 homolog (C. elegans) 2","protein-coding"]
[2144,"chr6",42397023,42397628,"+",0,"NA","Intergenic","Intergenic",-2913,"NM_001001452",387514,"Mm.377921","NM_001001452","ENSMUSG00000046652","Tas2r143","Gm1404|Tas2r43|mt2r36","taste receptor, type 2, member 143","protein-coding"]
[325,"chr10",111795328,111795634,"+",0,"NA","Intergenic","Intergenic",78895,"NR_046029",629206,"Mm.391444","NR_046029",null,"Gm20758","-","predicted gene, 20758","ncRNA"]
[378,"chr11",51614980,51616091,"+",0,"NA","Intergenic","Intergenic",-4238,"NM_026631",52530,"Mm.28203","NM_026631","ENSMUSG00000001056","Nhp2","2410130M07Rik|D11Ertd175e|Nola2","NHP2 ribonucleoprotein","protein-coding"]
[889,"chr14",99896551,99897260,"+",0,"NA","intron (NM_010636, intron 6 of 6)","intron (NM_010636, intron 6 of 6)",252891,"NM_010636",16597,"Mm.396499","NM_010636",null,"Klf12","2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik","Kruppel-like factor 12","protein-coding"]
[1233,"chr17",70747137,70748835,"+",0,"NA","intron (NM_001128181, intron 5 of 9)","intron (NM_001128181, intron 5 of 9)",98791,"NM_001164077",21815,"Mm.101034","NM_009372","ENSMUSG00000047407","Tgif1","AA959811|AI462167|Tgif","TGFB-induced factor homeobox 1","protein-coding"]
[540,"chr12",8780580,8781874,"+",0,"NA","intron (NM_011519, intron 1 of 4)","intron (NM_011519, intron 1 of 4)",9831,"NM_011519",20969,"Mm.2580","NM_011519","ENSMUSG00000020592","Sdc1","AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1","syndecan 1","protein-coding"]
[1162,"chr17",5958900,5960009,"+",0,"NA","intron (NM_001113352, intron 1 of 25)","intron (NM_001113352, intron 1 of 25)",-16132,"NM_001113351",20975,"Mm.236068","NM_011523","ENSMUSG00000023805","Synj2","AI481647|SJ2|mKIAA0348","synaptojanin 2","protein-coding"]
[1615,"chr2",145833087,145833376,"+",0,"NA","intron (NM_028724, intron 4 of 12)","intron (NM_028724, intron 4 of 12)",47115,"NM_028724",74030,"Mm.228799","NM_028724","ENSMUSG00000001768","Rin2","2010003K16Rik|4632403N06Rik|AW821980|RASSF4","Ras and Rab interactor 2","protein-coding"]
[211,"chr1",193546626,193547558,"+",0,"NA","Intergenic","Intergenic",-39562,"NR_029592",387201,null,"NR_029592","ENSMUSG00000065533","Mir205","Mirn205|mir-205|mmu-mir-205","microRNA 205","ncRNA"]
[684,"chr13",6190067,6194728,"+",0,"NA","Intergenic","A-rich|Low_complexity|Low_complexity",330908,"NM_011803",23849,"Mm.275036","NM_011803","ENSMUSG00000000078","Klf6","AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9","Kruppel-like factor 6","protein-coding"]
[2073,"chr5",120517100,120518189,"+",0,"NA","intron (NM_133221, intron 2 of 15)","intron (NM_133221, intron 2 of 15)",6452,"NM_001177594",170756,"Mm.291070","NM_133221","ENSMUSG00000032754","Slc8b1","AF261233|NCKX6|NCLX|Slc24a6","solute carrier family 8 (sodium/lithium/calcium exchanger), member B1","protein-coding"]
[1732,"chr3",92894592,92895693,"+",0,"NA","Intergenic","Intergenic",-24937,"NM_025621",66533,"Mm.144259","NM_025621","ENSMUSG00000090314","2310050C09Rik","-","RIKEN cDNA 2310050C09 gene","protein-coding"]
[861,"chr14",66257409,66258330,"+",0,"NA","intron (NM_172498, intron 1 of 29)","intron (NM_172498, intron 1 of 29)",23183,"NM_172498",19229,"Mm.21613","NM_172498","ENSMUSG00000059456","Ptk2b","CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk","PTK2 protein tyrosine kinase 2 beta","protein-coding"]
[337,"chr10",127144242,127145448,"+",0,"NA","Intergenic","Intergenic",-20311,"NR_045166",14421,"Mm.386762","NM_008080","ENSMUSG00000006731","B4galnt1","4933429D13Rik|Gal-NAc-T|GalNAc-T|GalNAcT|Galgt1|Ggm-2|Ggm2","beta-1,4-N-acetyl-galactosaminyl transferase 1","protein-coding"]
[2406,"chr8",13204779,13205190,"+",0,"NA","Intergenic","Intergenic",-4360,"NM_025768",66790,"Mm.34901","NM_025768","ENSMUSG00000038515","Grtp1","5430401C05Rik|C81211|Tbc1d6","GH regulated TBC protein 1","protein-coding"]
[76,"chr1",91077374,91078582,"+",0,"NA","intron (NM_001310732, intron 4 of 24)","intron (NM_001310732, intron 4 of 24)",24534,"NM_008515",16978,"Mm.45039","NM_008515","ENSMUSG00000026305","Lrrfip1","AU024550|Fliiap1","leucine rich repeat (in FLII) interacting protein 1","protein-coding"]
[1924,"chr4",129235362,129236029,"+",0,"NA","intron (NM_001285867, intron 1 of 6)","intron (NM_001285867, intron 1 of 6)",3523,"NM_001285865",97130,"Mm.331907","NM_001033189","ENSMUSG00000050390","C77080","Kiaa1522|mKIAA1522","expressed sequence C77080","protein-coding"]
[2718,"chr9",122103764,122104601,"+",0,"NA","Intergenic","Intergenic",-13084,"NM_001164572",20623,"Mm.257989","NM_133741","ENSMUSG00000038145","Snrk","2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096","SNF related kinase","protein-coding"]
[982,"chr15",77823455,77823735,"+",0,"NA","intron (NM_022410, intron 1 of 40)","intron (NM_022410, intron 1 of 40)",18580,"NM_022410",17886,"Mm.29677","NM_022410","ENSMUSG00000022443","Myh9","Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6","myosin, heavy polypeptide 9, non-muscle","protein-coding"]
[571,"chr12",69385611,69385845,"+",0,"NA","Intergenic","Intergenic",13578,"NM_007481",11845,"Mm.27308","NM_007481","ENSMUSG00000044147","Arf6","AI788669|AW496366","ADP-ribosylation factor 6","protein-coding"]
[1214,"chr17",42745058,42746086,"+",0,"NA","Intergenic","Intergenic",-3393,"NM_001033493",435529,"Mm.136350","NM_001033493","ENSMUSG00000057899","Adgrf2","Gpr111|PGR20","adhesion G protein-coupled receptor F2","protein-coding"]
[1190,"chr17",28224612,28225425,"+",0,"NA","intron (NM_027185, intron 7 of 10)","ID_B1|SINE|B4",-7736,"NM_011145",19015,"Mm.328914","NM_011145","ENSMUSG00000002250","Ppard","NUC-1|NUC1|Nr1c2|PPAR-beta|PPAR-delta|PPAR[b]|PPARdelta|Pparb|Pparb/d","peroxisome proliferator activator receptor delta","protein-coding"]
[2592,"chr9",50470139,50471773,"+",0,"NA","Intergenic","Intergenic",-23569,"NM_029639",76509,"Mm.29959","NM_029639","ENSMUSG00000032068","Plet1","0610037B23Rik|1600029D21Rik|AA407923|AU043048","placenta expressed transcript 1","protein-coding"]
[389,"chr11",57913345,57915177,"+",0,"NA","Intergenic","(TTTTG)n|Simple_repeat|Simple_repeat",-82114,"NM_008213",15110,"Mm.4746","NM_008213","ENSMUSG00000037335","Hand1","Ehand1|Hxt|Th1|Thing1|bHLHa27|eHAND","heart and neural crest derivatives expressed transcript 1","protein-coding"]
[1660,"chr2",170185021,170185632,"+",0,"NA","Intergenic","Intergenic",-42651,"NM_001159683",228913,"Mm.22858","NM_001033299","ENSMUSG00000052056","Zfp217","4933431C08Rik|AW987152|Gm562|ZABC1|Znf217","zinc finger protein 217","protein-coding"]
[1171,"chr17",16067835,16069736,"+",0,"NA","Intergenic","Intergenic",-242199,"NM_178615",68799,"Mm.293466","NM_178615","ENSMUSG00000048027","Rgmb","1110059F19Rik|DRAGON","repulsive guidance molecule family member B","protein-coding"]
[1345,"chr18",76067751,76068033,"+",0,"NA","intron (NM_145356, intron 3 of 4)","L1_Mur3|LINE|L1",30579,"NR_045365",73009,"Mm.443541","NR_045365",null,"2900057B20Rik","-","RIKEN cDNA 2900057B20 gene","ncRNA"]
[2290,"chr7",35076551,35077477,"+",0,"NA","Intergenic","Intergenic",-20448,"NM_009884",12611,"Mm.273090","NM_009884","ENSMUSG00000056216","Cebpg","C/EBP[g]|C/EBPgamma|GPE1-BP|Gpe1bp|Ig/EBP","CCAAT/enhancer binding protein (C/EBP), gamma","protein-coding"]
[966,"chr15",61608352,61608893,"+",0,"NA","Intergenic","Intergenic",165829,"NR_040350",432956,"Mm.404918","NR_040350",null,"D030024E09Rik","-","RIKEN cDNA D030024E09 gene","ncRNA"]
[1123,"chr16",76958423,76959472,"+",0,"NA","Intergenic","Intergenic",51934,"NR_040573",76601,"Mm.396217","NR_040573","ENSMUSG00000100857","1700041M19Rik","-","RIKEN cDNA 1700041M19 gene","ncRNA"]
[2314,"chr7",73532502,73534305,"+",0,"NA","intron (NM_001081345, intron 2 of 38)","(GA)n|Simple_repeat|Simple_repeat",8343,"NM_001081345",244059,"Mm.34539","NM_001081345","ENSMUSG00000078671","Chd2","2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2","chromodomain helicase DNA binding protein 2","protein-coding"]
[2216,"chr6",121193498,121195866,"+",0,"NA","3' UTR (NM_028730, exon 5 of 5)","3' UTR (NM_028730, exon 5 of 5)",11015,"NM_001304773",74043,"Mm.491240","NM_028730","ENSMUSG00000067825","Pex26","4632428M11Rik","peroxisomal biogenesis factor 26","protein-coding"]
[992,"chr15",83182140,83182371,"+",0,"NA","Intergenic","MLTR14|LTR|ERV1",-10047,"NM_029787",109754,"Mm.22560","NM_029787","ENSMUSG00000018042","Cyb5r3","0610016L08Rik|2500002N19Rik|C85115|Dia-1|Dia1|WU:AL591952.1-001|WU:AL591952.1-002|WU:AL591952.1-003|WU:Cyb5r3","cytochrome b5 reductase 3","protein-coding"]
[236,"chr10",19061341,19062037,"+",0,"NA","Intergenic","Intergenic",-46279,"NM_009397",21929,"Mm.116683","NM_009397","ENSMUSG00000019850","Tnfaip3","A20|Tnfip3","tumor necrosis factor, alpha-induced protein 3","protein-coding"]
[758,"chr13",63072707,63073479,"+",0,"NA","intron (NM_001289924, intron 5 of 16)","intron (NM_001289924, intron 5 of 16)",108200,"NM_001289924",72061,"Mm.188105","NM_028079","ENSMUSG00000021458","2010111I01Rik","2300006M17Rik|AP-O|Aopep|mir-23b|mir-24-1|mir-27b","RIKEN cDNA 2010111I01 gene","protein-coding"]
[1954,"chr4",139547976,139548132,"+",0,"NA","intron (NM_183148, intron 4 of 11)","intron (NM_183148, intron 4 of 11)",17506,"NM_183148",212632,"Mm.30464","NM_183148","ENSMUSG00000041025","Iffo2","C79267","intermediate filament family orphan 2","protein-coding"]
[218,"chr10",3383512,3384405,"+",0,"NA","intron (NM_133485, intron 1 of 3)","intron (NM_133485, intron 1 of 3)",17808,"NM_133485",76142,"Mm.308126","NM_133485","ENSMUSG00000040653","Ppp1r14c","6330514J04Rik|KEPI","protein phosphatase 1, regulatory (inhibitor) subunit 14c","protein-coding"]
[706,"chr13",37962919,37963323,"+",0,"NA","Intergenic","Intergenic",31069,"NM_025965",107513,"Mm.426670","NM_025965","ENSMUSG00000021427","Ssr1","2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA","signal sequence receptor, alpha","protein-coding"]
[14,"chr1",36060272,36060492,"+",0,"NA","Intergenic","Intergenic",-8018,"NM_015818",50785,"Mm.213566","NM_015818","ENSMUSG00000045216","Hs6st1","6Ost1","heparan sulfate 6-O-sulfotransferase 1","protein-coding"]
[2345,"chr7",98169442,98170108,"+",0,"NA","intron (NM_007602, intron 1 of 12)","intron (NM_007602, intron 1 of 12)",-7419,"NR_045972",330599,"Mm.406608","NR_045969",null,"Gm16938","-","predicted gene, 16938","ncRNA"]
[2587,"chr9",45059395,45061774,"+",0,"NA","intron (NM_001093749, intron 1 of 5)","MIR|SINE|MIR",5403,"NM_001093749",319742,"Mm.49611","NM_176993",null,"Mpzl3","5430427F17Rik|A530065I17Rik|rc","myelin protein zero-like 3","protein-coding"]
[1608,"chr2",141264858,141267681,"+",0,"NA","intron (NM_001013802, intron 5 of 18)","intron (NM_001013802, intron 5 of 18)",-594793,"NM_178382",71436,"Mm.426781","NM_178382","ENSMUSG00000051379","Flrt3","5530600M07Rik|C430047I10Rik|mKIAA1469","fibronectin leucine rich transmembrane protein 3","protein-coding"]
[2328,"chr7",80167248,80167508,"+",0,"NA","Intergenic","B1_Mur1|SINE|Alu",-19463,"NM_013659",20352,"Mm.275909","NM_013659","ENSMUSG00000030539","Sema4b","SemC|Semac|mKIAA1745","sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B","protein-coding"]
[2567,"chr9",43127879,43128248,"+",0,"NA","intron (NM_011139, intron 11 of 12)","intron (NM_011139, intron 11 of 12)",-11493,"NM_001034863",235300,"Mm.261326","NM_001034863","ENSMUSG00000048503","Tmem136","AA396355|Gm184","transmembrane protein 136","protein-coding"]
[2474,"chr8",91395053,91395590,"+",0,"NA","intron (NM_011936, intron 1 of 8)","intron (NM_011936, intron 1 of 8)",81796,"NM_011936",26383,"Mm.4375","NM_011936","ENSMUSG00000055932","Fto","AW743446|mKIAA1752","fat mass and obesity associated","protein-coding"]
[234,"chr10",19053132,19054324,"+",0,"NA","Intergenic","L1_Mur3|LINE|L1",-38318,"NM_009397",21929,"Mm.116683","NM_009397","ENSMUSG00000019850","Tnfaip3","A20|Tnfip3","tumor necrosis factor, alpha-induced protein 3","protein-coding"]
[594,"chr12",70795328,70795475,"+",0,"NA","Intergenic","Intergenic",-30113,"NM_028127",319710,"Mm.2962","NM_028127","ENSMUSG00000048285","Frmd6","2610019M19Rik|4930488L10Rik|AW212977|Willin","FERM domain containing 6","protein-coding"]
[1438,"chr2",5851488,5851600,"+",0,"NA","intron (NM_016918, intron 1 of 8)","Lx9|LINE|L1",6510,"NM_016918",53893,"Mm.251904","NM_016918","ENSMUSG00000025817","Nudt5","-","nudix (nucleoside diphosphate linked moiety X)-type motif 5","protein-coding"]
[1903,"chr4",119140908,119141908,"+",0,"NA","Intergenic","Intergenic",32448,"NM_001145935",195522,"Mm.169620","NM_183140","ENSMUSG00000045268","Zfp691","6430544H17Rik|Znf691","zinc finger protein 691","protein-coding"]
[2188,"chr6",100800976,100801114,"+",0,"NA","intron (NM_198612, intron 6 of 6)","intron (NM_198612, intron 6 of 6)",-32593,"NM_182939",232314,"Mm.27223","NM_182939","ENSMUSG00000052144","Ppp4r2","BE691708|C230060M08Rik","protein phosphatase 4, regulatory subunit 2","protein-coding"]
[1778,"chr3",108778726,108782161,"+",0,"NA","intron (NM_177859, intron 10 of 11)","intron (NM_177859, intron 10 of 11)",40785,"NM_177859",329738,"Mm.72322","NM_177859","ENSMUSG00000049565","Aknad1","4921525H12Rik","AKNA domain containing 1","protein-coding"]
[2339,"chr7",89540535,89540889,"+",0,"NA","Intergenic","L1MB3|LINE|L1",-23126,"NM_029614",76453,"Mm.250438","NM_029614","ENSMUSG00000039405","Prss23","2310046G15Rik|4930479H08Rik|AI790574|Spuve","protease, serine 23","protein-coding"]
[1859,"chr4",56533091,56533721,"+",0,"NA","Intergenic","Intergenic",208019,"NM_025271",11471,"Mm.251434","NM_025271","ENSMUSG00000070980","Actl7b","Tact1","actin-like 7b","protein-coding"]
[160,"chr1",156990932,156991520,"+",0,"NA","Intergenic","Intergenic",-51600,"NM_023884",78255,"Mm.28376","NM_023884","ENSMUSG00000026594","Ralgps2","1810020P17Rik|2210408F11Rik|4921528G01Rik|9130014M22Rik|AU043409|AW046161","Ral GEF with PH domain and SH3 binding motif 2","protein-coding"]
[98,"chr1",120135801,120136128,"+",0,"NA","intron (NM_001172074, intron 1 of 4)","intron (NM_001172074, intron 1 of 4)",14777,"NM_001172074",73103,"Mm.271602","NM_028439","ENSMUSG00000026388","3110009E18Rik","-","RIKEN cDNA 3110009E18 gene","protein-coding"]
[1048,"chr16",14375977,14377389,"+",0,"NA","intron (NM_008576, intron 1 of 30)","intron (NM_008576, intron 1 of 30)",15125,"NM_008576",17250,"Mm.196634","NM_008576","ENSMUSG00000023088","Abcc1","Abcc1a|Abcc1b|MRP|Mdrap|Mrp1","ATP-binding cassette, sub-family C (CFTR/MRP), member 1","protein-coding"]
[1278,"chr18",12504232,12506184,"+",0,"NA","intron (NM_010680, intron 38 of 74)","intron (NM_010680, intron 38 of 74)",-138325,"NM_028341",72747,"Mm.52526","NM_028341","ENSMUSG00000024424","Ttc39c","1700008N02Rik|2810439F02Rik","tetratricopeptide repeat domain 39C","protein-coding"]
[2434,"chr8",44984821,44985187,"+",0,"NA","intron (NM_001081286, intron 1 of 25)","intron (NM_001081286, intron 1 of 25)",34796,"NM_001081286",14107,"Mm.27365","NM_001081286","ENSMUSG00000070047","Fat1","2310038E12Rik|AU023433|Fath|mFat1","FAT tumor suppressor homolog 1 (Drosophila)","protein-coding"]
[1000,"chr15",95802759,95804085,"+",0,"NA","intron (NM_175344, intron 1 of 19)","intron (NM_175344, intron 1 of 19)",12579,"NM_001253813",105722,"Mm.38087","NM_175344","ENSMUSG00000064210","Ano6","2900059G15Rik|AA407480|AW554778|F730003B03Rik|Tmem16f","anoctamin 6","protein-coding"]
[1381,"chr19",21051579,21052255,"+",0,"NA","Intergenic","Intergenic",-52793,"NR_126458",75354,"Mm.243873","NR_126458",null,"4930554I06Rik","-","RIKEN cDNA 4930554I06 gene","ncRNA"]
[43,"chr1",67044800,67045632,"+",0,"NA","Intergenic","Intergenic",-6344,"NM_021295",14768,"Mm.20522","NM_021295","ENSMUSG00000026000","Lancl1","AW124738|Gpr69|Gpr69a|p40","LanC (bacterial lantibiotic synthetase component C)-like 1","protein-coding"]
[1061,"chr16",23984708,23985399,"+",0,"NA","intron (NM_009744, intron 1 of 9)","intron (NM_009744, intron 1 of 9)",3559,"NM_009744",12053,"Mm.347398","NM_009744","ENSMUSG00000022508","Bcl6","Bcl5","B cell leukemia/lymphoma 6","protein-coding"]
[2582,"chr9",43858558,43858814,"+",0,"NA","Intergenic","Intergenic",114110,"NM_021424",58235,"Mm.335096","NM_021424","ENSMUSG00000032012","Pvrl1","AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|nectin-1","poliovirus receptor-related 1","protein-coding"]
[2054,"chr5",103421235,103422146,"+",0,"NA","Intergenic","Intergenic",-3502,"NM_011204",19249,"Mm.3414","NM_011204","ENSMUSG00000034573","Ptpn13","AI324989|PTP-BL|PTPL1|Ptpri|RIP","protein tyrosine phosphatase, non-receptor type 13","protein-coding"]
[1728,"chr3",89387467,89387683,"+",0,"NA","intron (NM_009565, intron 1 of 2)","intron (NM_009565, intron 1 of 2)",-4289,"NR_040403",545539,"Mm.393389","NR_040403","ENSMUSG00000074466","Gm15417","ENSMUSG00000074466|OTTMUSG00000021274","predicted gene 15417","ncRNA"]
[193,"chr1",182382261,182383787,"+",0,"NA","Intergenic","IMPB_01|Satellite|Satellite",-26143,"NM_173378",209456,"Mm.287450","NM_173378","ENSMUSG00000026510","Trp53bp2","53BP2|AI746547|ASPP2|PPP1R13A|Tp53bp2|X98550","transformation related protein 53 binding protein 2","protein-coding"]
[288,"chr10",78428357,78429180,"+",0,"NA","Intergenic","Intergenic",3098,"NM_007793",13014,"Mm.6095","NM_007793","ENSMUSG00000005054","Cstb","AA960480|Stfb","cystatin B","protein-coding"]
[119,"chr1",133800046,133801708,"+",0,"NA","Intergenic","Intergenic",-47130,"NM_213616",381290,"Mm.188617","NM_213616","ENSMUSG00000026463","Atp2b4","Pmca4","ATPase, Ca++ transporting, plasma membrane 4","protein-coding"]
[1555,"chr2",85510232,85511719,"+",0,"NA","intron (NM_001081664, intron 1 of 11)","intron (NM_001081664, intron 1 of 11)",7960,"NM_001081664",228151,"Mm.17636","NM_001081664",null,"4833423E24Rik","Fads2p1|Gm113","RIKEN cDNA 4833423E24 gene","protein-coding"]
[586,"chr12",70579197,70579491,"+",0,"NA","intron (NR_037248, intron 4 of 4)","Plat_L3|LINE|CR1",126190,"NM_028339",72736,"Mm.204670","NM_028339","ENSMUSG00000021072","Tmx1","2810425A04Rik|AI465319|Txndc1","thioredoxin-related transmembrane protein 1","protein-coding"]
[410,"chr11",69092723,69092843,"+",0,"NA","TTS (NM_009497)","TTS (NM_009497)",4255,"NM_009497",22318,"Mm.28643","NM_009497","ENSMUSG00000020894","Vamp2","Syb-2|Syb2|sybII","vesicle-associated membrane protein 2","protein-coding"]
[999,"chr15",90606955,90609306,"+",0,"NA","intron (NM_025815, intron 5 of 19)","Lx9|LINE|L1",71258,"NM_025815",66871,"Mm.290991","NM_025815","ENSMUSG00000052560","Cpne8","1200003E11Rik|1500031E20Rik","copine VIII","protein-coding"]
[1180,"chr17",26477922,26479494,"+",0,"NA","Intergenic","Intergenic",29764,"NM_013642",19252,"Mm.239041","NM_013642","ENSMUSG00000024190","Dusp1","3CH134|MKP1|Ptpn16|U19515|erp|mkp-1","dual specificity phosphatase 1","protein-coding"]
[2169,"chr6",72881595,72881768,"+",0,"NA","intron (NM_019715, intron 1 of 6)","intron (NM_019715, intron 1 of 6)",18298,"NM_019715",74287,"Mm.29194","NM_019715","ENSMUSG00000055239","Kcmf1","1700094M07Rik|Debt91|Pmcf","potassium channel modulatory factor 1","protein-coding"]
[430,"chr11",77003289,77003743,"+",0,"NA","intron (NM_010484, intron 1 of 13)","B1_Mus1|SINE|Alu",4919,"NM_010484",15567,"Mm.300318","NM_010484","ENSMUSG00000020838","Slc6a4","5-HTT|AI323329|Htt|Sert","solute carrier family 6 (neurotransmitter transporter, serotonin), member 4","protein-coding"]
[1185,"chr17",27050867,27051188,"+",0,"NA","Intergenic","Intergenic",-6277,"NM_080553",16440,"Mm.458106","NM_080553","ENSMUSG00000042644","Itpr3","Ip3r3|Itpr-3","inositol 1,4,5-triphosphate receptor 3","protein-coding"]
[447,"chr11",94276260,94276411,"+",0,"NA","Intergenic","Intergenic",-33756,"NM_181819",278507,"Mm.342216","NM_181819","ENSMUSG00000044177","Wfikkn2","2610304F08Rik|AY100450|Gasp1|WFIKKNRP","WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2","protein-coding"]
[1446,"chr2",9487931,9488077,"+",0,"NA","Intergenic","Intergenic",298489,"NR_038180",73438,"Mm.23558","NR_038180","ENSMUSG00000085580","1700061F12Rik","-","RIKEN cDNA 1700061F12 gene","ncRNA"]
[1741,"chr3",94649047,94650541,"+",0,"NA","intron (NM_011656, intron 1 of 12)","intron (NM_011656, intron 1 of 12)",9078,"NM_001293728",22156,"Mm.10214","NM_011656","ENSMUSG00000005968","Tuft1","-","tuftelin 1","protein-coding"]
[2118,"chr6",17142277,17143117,"+",0,"NA","Intergenic","Intergenic",-55054,"NR_102305",319682,"Mm.136046","NR_102304","ENSMUSG00000085171","D830026I12Rik","-","RIKEN cDNA D830026I12 gene","ncRNA"]
[415,"chr11",70473617,70473840,"+",0,"NA","Intergenic","Intergenic",-13744,"NM_023158",66102,"Mm.425692","NM_023158","ENSMUSG00000018920","Cxcl16","0910001K24Rik|AV290116|BB024863|CXCL16v1|CXCL16v2|SR-PSOX|Zmynd15|b2b498Clo","chemokine (C-X-C motif) ligand 16","protein-coding"]
[1130,"chr16",78249905,78250484,"+",0,"NA","TTS (NR_045698)","TTS (NR_045698)",5260,"NR_045698",100503619,"Mm.387531","NR_045698",null,"E330011O21Rik","-","RIKEN cDNA E330011O21 gene","ncRNA"]
[1315,"chr18",57785860,57786425,"+",0,"NA","Intergenic","Intergenic",-92536,"NM_009194",20496,"Mm.399997","NM_009194","ENSMUSG00000024597","Slc12a2","9330166H04Rik|Nkcc1|mBSC2|sy-ns","solute carrier family 12, member 2","protein-coding"]
[189,"chr1",180966094,180967351,"+",0,"NA","intron (NM_144794, intron 17 of 22)","intron (NM_144794, intron 17 of 22)",24204,"NM_144794",208795,"Mm.185518","NM_144794","ENSMUSG00000026519","Tmem63a","BC014795|Tmem64a","transmembrane protein 63a","protein-coding"]
[2597,"chr9",54644962,54649337,"+",0,"NA","intron (NM_053178, intron 1 of 13)","intron (NM_053178, intron 1 of 13)",14736,"NM_053178",94180,"Mm.20592","NM_053178","ENSMUSG00000032281","Acsbg1","BG1|Bgm|E230019G03Rik|Lpd|R75185|mKIAA0631","acyl-CoA synthetase bubblegum family member 1","protein-coding"]
[1292,"chr18",34901933,34902043,"+",0,"NA","TTS (NM_144866)","TTS (NM_144866)",30015,"NM_144866",225363,"Mm.329353","NM_144866","ENSMUSG00000024360","Etf1","AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1","eukaryotic translation termination factor 1","protein-coding"]
[2330,"chr7",80779681,80780207,"+",0,"NA","intron (NM_016721, intron 2 of 37)","PB1D7|SINE|Alu",23387,"NM_016721",29875,"Mm.207619","NM_016721","ENSMUSG00000030536","Iqgap1","AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051","IQ motif containing GTPase activating protein 1","protein-coding"]
[1356,"chr19",5017418,5019574,"+",0,"NA","Intergenic","URR1A|DNA|hAT-Charlie",-5510,"NM_007854",13340,"Mm.4930","NM_007854","ENSMUSG00000024891","Slc29a2","Der12|Ent2|Hnp36","solute carrier family 29 (nucleoside transporters), member 2","protein-coding"]
[480,"chr11",99199457,99199951,"+",0,"NA","Intergenic","Intergenic",31313,"NM_020618",57376,"Mm.379086","NM_020618","ENSMUSG00000037935","Smarce1","2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27","SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1","protein-coding"]
[107,"chr1",130740509,130741628,"+",0,"NA","exon (NM_177604, exon 3 of 4)","exon (NM_177604, exon 3 of 4)",9092,"NM_177604",212439,"Mm.268547","NM_177604","ENSMUSG00000042510","AA986860","E030025M07|Sarg","expressed sequence AA986860","protein-coding"]
[438,"chr11",87422081,87423542,"+",0,"NA","intron (NM_031386, intron 1 of 30)","intron (NM_031386, intron 1 of 30)",-4780,"NM_001199293",83560,"Mm.440758","NM_031386","ENSMUSG00000010342","Tex14","C85585","testis expressed gene 14","protein-coding"]
[1153,"chr16",97362034,97363287,"+",0,"NA","intron (NM_019517, intron 1 of 8)","intron (NM_019517, intron 1 of 8)",5932,"NM_019517",56175,"Mm.97885","NM_019517","ENSMUSG00000040605","Bace2","1110059C24Rik|AEPLC|AI850424|ALP56|ARP1|ASP21|BAE2|CDA13|CEAP1|DRAP","beta-site APP-cleaving enzyme 2","protein-coding"]
[1871,"chr4",70529787,70530189,"+",0,"NA","intron (NM_172694, intron 1 of 5)","ID_B1|SINE|B4",4940,"NM_172694",230316,"Mm.251188","NM_172694",null,"Megf9","4933405H16Rik|9630025C07|Egfl5|mKIAA0818","multiple EGF-like-domains 9","protein-coding"]
[2385,"chr7",130670621,130672025,"+",0,"NA","intron (NM_206856, intron 3 of 20)","G-rich|Low_complexity|Low_complexity",-21233,"NM_021314",57752,"Mm.86322","NM_021314","ENSMUSG00000030852","Tacc2","mKIAA4180","transforming, acidic coiled-coil containing protein 2","protein-coding"]
[87,"chr1",106840034,106840596,"+",0,"NA","Intergenic","Intergenic",-20865,"NM_009257",20724,"Mm.268618","NM_009257","ENSMUSG00000067006","Serpinb5","1110036M19Rik|AI462524|AI646751|Maspin|PI-5|Spi7|ovalbumin","serine (or cysteine) peptidase inhibitor, clade B, member 5","protein-coding"]
[1022,"chr15",100082018,100082581,"+",0,"NA","intron (NR_037311, intron 3 of 3)","intron (NR_037311, intron 3 of 3)",43635,"NM_001159361",239667,"Mm.243658","NM_172819","ENSMUSG00000023026","Dip2b","4932422C22|AI317237|AI854602|mKIAA1463","DIP2 disco-interacting protein 2 homolog B (Drosophila)","protein-coding"]
[1832,"chr4",32288227,32289214,"+",0,"NA","Intergenic","Intergenic",-128715,"NM_001109661",12014,"Mm.491223","NM_007521","ENSMUSG00000040270","Bach2","E030004N02Rik","BTB and CNC homology 2","protein-coding"]
[2704,"chr9",113729267,113730674,"+",0,"NA","Intergenic","Intergenic",-11503,"NM_001286599",76499,"Mm.222272","NM_029633","ENSMUSG00000033392","Clasp2","1500004F14Rik|8030404L10Rik|C77448|CLASP2beta|mKIAA0627","CLIP associating protein 2","protein-coding"]
[953,"chr15",59212976,59213845,"+",0,"NA","Intergenic","MIRb|SINE|MIR",-93538,"NR_045613",100416830,"Mm.490788","NR_045613","ENSMUSG00000098528","Zfp572","4930472F24Rik","zinc finger protein 572","pseudo"]
[221,"chr10",8358515,8358879,"+",0,"NA","intron (NM_177387, intron 2 of 7)","intron (NM_177387, intron 2 of 7)",160128,"NM_177387",338362,"Mm.41163","NM_177387","ENSMUSG00000047712","Ust","D930010O20Rik|UA2OST","uronyl-2-sulfotransferase","protein-coding"]
[1424,"chr19",47507499,47511741,"+",0,"NA","intron (NM_175360, intron 8 of 9)","intron (NM_175360, intron 8 of 9)",-3362,"NR_045322",100503104,"Mm.442735","NR_045322","ENSMUSG00000097990","Gm19557","-","predicted gene, 19557","ncRNA"]
[1560,"chr2",92426693,92428752,"+",0,"NA","intron (NM_009963, intron 1 of 11)","MIRb|SINE|MIR",6347,"NM_009963",12953,"Mm.254181","NM_009963","ENSMUSG00000068742","Cry2","AV006279|D130054K12Rik","cryptochrome 2 (photolyase-like)","protein-coding"]
[417,"chr11",70579604,70580599,"+",0,"NA","intron (NM_176893, intron 1 of 31)","ID2|SINE|ID",17220,"NM_016713",50932,"Mm.42967","NM_016713","ENSMUSG00000020827","Mink1","B55|MINK|Map4k6|Ysk2","misshapen-like kinase 1 (zebrafish)","protein-coding"]
[784,"chr13",85431284,85431714,"+",0,"NA","Intergenic","Intergenic",-142013,"NM_145452",218397,"Mm.259653","NM_145452","ENSMUSG00000021549","Rasa1","Gap|RasGAP|Rasa","RAS p21 protein activator 1","protein-coding"]
[1762,"chr3",102038243,102040298,"+",0,"NA","Intergenic","Intergenic",29125,"NM_178777",18072,"Mm.137286","NM_178777","ENSMUSG00000048540","Nhlh2","6230401I09Rik|Hen2|NSCL2|Nscl-2|bHLHa34","nescient helix loop helix 2","protein-coding"]
[260,"chr10",59949101,59949661,"+",0,"NA","TTS (NM_029083)","TTS (NM_029083)",2389,"NM_029083",74747,"Mm.21697","NM_029083","ENSMUSG00000020108","Ddit4","5830413E08Rik|AA415483|REDD1|Rtp801|dig2","DNA-damage-inducible transcript 4","protein-coding"]
[2061,"chr5",113154136,113154496,"+",0,"NA","intron (NM_172884, intron 1 of 7)","intron (NM_172884, intron 1 of 7)",8997,"NM_172884",243219,"Mm.160131","NM_172884","ENSMUSG00000051339","2900026A02Rik","8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671","RIKEN cDNA 2900026A02 gene","protein-coding"]
[1844,"chr4",41077233,41077873,"+",0,"NA","Intergenic","Intergenic",20630,"NM_016689",11828,"Mm.34043","NM_016689","ENSMUSG00000028435","Aqp3","AQP-2","aquaporin 3","protein-coding"]
[1530,"chr2",62394410,62394709,"+",0,"NA","intron (NM_010074, intron 2 of 25)","MLT-int|LTR|ERVL-MaLR",17672,"NM_010074",13482,"Mm.1151","NM_010074","ENSMUSG00000035000","Dpp4","Cd26|Dpp-4|THAM","dipeptidylpeptidase 4","protein-coding"]
[2504,"chr8",109958116,109959022,"+",0,"NA","intron (NM_028584, intron 2 of 2)","intron (NM_028584, intron 2 of 2)",3636,"NM_212447",73608,"Mm.86833","NM_028584","ENSMUSG00000001672","Marveld3","1810006A16Rik|AI642133|Marvd3|Mrvldc3","MARVEL (membrane-associating) domain containing 3","protein-coding"]
[762,"chr13",63120046,63120224,"+",0,"NA","intron (NM_001289924, intron 5 of 16)","intron (NM_001289924, intron 5 of 16)",-119894,"NR_110520",72061,"Mm.188105","NM_028079","ENSMUSG00000021458","2010111I01Rik","2300006M17Rik|AP-O|Aopep|mir-23b|mir-24-1|mir-27b","RIKEN cDNA 2010111I01 gene","protein-coding"]
[1144,"chr16",95658105,95659421,"+",0,"NA","Intergenic","Intergenic",-43644,"NM_011809",23872,"Mm.290207","NM_011809","ENSMUSG00000022895","Ets2","AU022856|Ets-2","E26 avian leukemia oncogene 2, 3' domain","protein-coding"]
[734,"chr13",46841056,46843138,"+",0,"NA","intron (NM_010617, intron 4 of 37)","intron (NM_010617, intron 4 of 37)",87621,"NM_010617",16553,"Mm.342703","NM_010617","ENSMUSG00000021375","Kif13a","4930505I07Rik|mKIAA4109","kinesin family member 13A","protein-coding"]
[1723,"chr3",88510357,88514900,"+",0,"NA","Intergenic","Intergenic",-9276,"NM_001002011",16905,"Mm.243014","NM_019390","ENSMUSG00000028063","Lmna","Dhe","lamin A","protein-coding"]
[2621,"chr9",70257131,70258334,"+",0,"NA","intron (NM_181072, intron 1 of 27)","intron (NM_181072, intron 1 of 27)",50382,"NM_181072",71602,"Mm.249311","NM_181072","ENSMUSG00000032220","Myo1e","2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3","myosin IE","protein-coding"]
[2047,"chr5",92494817,92495374,"+",0,"NA","intron (NM_007644, intron 1 of 11)","L1MA8|LINE|L1",10562,"NM_007644",12492,"Mm.297964","NM_007644",null,"Scarb2","9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2|MLGP85","scavenger receptor class B, member 2","protein-coding"]
[144,"chr1",138535668,138536756,"+",0,"NA","intron (NM_001311148, intron 3 of 7)","intron (NM_001311148, intron 3 of 7)",83545,"NM_021605",59125,"Mm.143817","NM_021605","ENSMUSG00000026393","Nek7","2810460C19Rik|AU020186","NIMA (never in mitosis gene a)-related expressed kinase 7","protein-coding"]
[1440,"chr2",9286378,9286648,"+",0,"NA","Intergenic","Intergenic",96998,"NR_038180",73438,"Mm.23558","NR_038180","ENSMUSG00000085580","1700061F12Rik","-","RIKEN cDNA 1700061F12 gene","ncRNA"]
[2524,"chr8",123993464,123993909,"+",0,"NA","Intergenic","Intergenic",-10564,"NM_019552",56199,"Mm.274243","NM_019552","ENSMUSG00000031974","Abcb10","Abc-me|Abcb12","ATP-binding cassette, sub-family B (MDR/TAP), member 10","protein-coding"]
[381,"chr11",52077367,52078907,"+",0,"NA","intron (NM_001166654, intron 13 of 13)","intron (NM_001166654, intron 13 of 13)",-20687,"NM_019411",19052,"Mm.260288","NM_019411",null,"Ppp2ca","PP2A|R75353","protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform","protein-coding"]
[1471,"chr2",25533308,25533958,"+",0,"NA","intron (NM_009422, intron 4 of 10)","B3|SINE|B2",13307,"NM_001290413",22030,"Mm.3399","NM_009422","ENSMUSG00000026942","Traf2","AI325259","TNF receptor-associated factor 2","protein-coding"]
[1814,"chr3",152121200,152123898,"+",0,"NA","intron (NM_016867, intron 3 of 5)","intron (NM_016867, intron 3 of 5)",43351,"NM_016867",54120,"Mm.97","NM_016867",null,"Gipc2","2200002N01Rik|AU021850|Semcap2","GIPC PDZ domain containing family, member 2","protein-coding"]
[906,"chr14",118590125,118590424,"+",0,"NA","intron (NM_001163675, intron 19 of 30)","intron (NM_001163675, intron 19 of 30)",2198,"NR_105815",102465208,null,"NR_105815","ENSMUSG00000098433","Mir6391","Gm27914|mmu-mir-6391","microRNA 6391","ncRNA"]
[2205,"chr6",114934482,114935931,"+",0,"NA","Intergenic","RSINE1|SINE|B4",-13454,"NM_177683",232334,"Mm.268357","NM_177683",null,"Vgll4","BC048841|VGL-4","vestigial like 4 (Drosophila)","protein-coding"]
[1349,"chr18",82735887,82736117,"+",0,"NA","Intergenic","Intergenic",15721,"NR_039572",100628586,null,"NR_039572","ENSMUSG00000092638","Mir5112","mmu-mir-5112|mu-mir-5112","microRNA 5112","ncRNA"]
[177,"chr1",172309958,172310160,"+",0,"NA","Intergenic","Intergenic",-2308,"NM_080419",140559,"Mm.271717","NM_080419","ENSMUSG00000038034","Igsf8","ESTM34|EWI-2|KCT-4|PGRL","immunoglobulin superfamily, member 8","protein-coding"]
[2213,"chr6",120797346,120799188,"+",0,"NA","intron (NM_007510, intron 7 of 8)","intron (NM_007510, intron 7 of 8)",24418,"NM_007510",11973,"Mm.29045","NM_007510","ENSMUSG00000019210","Atp6v1e1","2410029D23Rik|Atp6e|Atp6e2|Atp6v1e|D6Ertd385e|E2|P31|Vma4","ATPase, H+ transporting, lysosomal V1 subunit E1","protein-coding"]
[373,"chr11",46224805,46225234,"+",0,"NA","intron (NM_133769, intron 23 of 30)","PB1D10|SINE|Alu",-7116,"NR_105955",102465598,null,"NR_105955","ENSMUSG00000099230","Mir6989","Gm27885|mmu-mir-6989","microRNA 6989","ncRNA"]
[2078,"chr5",123007341,123008719,"+",0,"NA","Intergenic","MLT1D|LTR|ERVL-MaLR",-7044,"NM_175423",109305,"Mm.218582","NM_175423","ENSMUSG00000049686","Orai1","D730049H07Rik|Tmem142a|orai-1","ORAI calcium release-activated calcium modulator 1","protein-coding"]
[773,"chr13",74744934,74745047,"+",0,"NA","intron (NM_009817, intron 7 of 30)","MER102a|DNA|hAT-Charlie",-10729,"NM_001301181",12380,"Mm.29163","NM_009817",null,"Cast","-","calpastatin","protein-coding"]
[1247,"chr17",83880598,83880983,"+",0,"NA","Intergenic","B3A|SINE|B2",-34000,"NM_025325",107766,"Mm.30100","NM_025325","ENSMUSG00000000673","Haao","0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO","3-hydroxyanthranilate 3,4-dioxygenase","protein-coding"]
[22,"chr1",40317998,40318877,"+",0,"NA","Intergenic","L1_Mur3|LINE|L1",-6190,"NM_133193",107527,"Mm.155583","NM_133193","ENSMUSG00000070942","Il1rl2","AI481289|AW551444|IL-1Rrp2","interleukin 1 receptor-like 2","protein-coding"]
[205,"chr1",193508598,193511976,"+",0,"NA","Intergenic","Intergenic",-2757,"NR_029592",387201,null,"NR_029592","ENSMUSG00000065533","Mir205","Mirn205|mir-205|mmu-mir-205","microRNA 205","ncRNA"]
[1309,"chr18",44634108,44635174,"+",0,"NA","intron (NM_001085373, intron 3 of 18)","MTEa|LTR|ERVL-MaLR",-27024,"NR_026853",626275,"Mm.427116","NR_026853","ENSMUSG00000097610","A930012L18Rik","-","RIKEN cDNA A930012L18 gene","ncRNA"]
[1752,"chr3",96675049,96675593,"+",0,"NA","intron (NM_001081139, intron 1 of 12)","intron (NM_001081139, intron 1 of 12)",5190,"NM_001081139",213121,"Mm.39732","NM_001081139","ENSMUSG00000038354","Ankrd35","4732436F15Rik","ankyrin repeat domain 35","protein-coding"]
[1576,"chr2",110718532,110719438,"+",0,"NA","intron (NM_001128103, intron 14 of 26)","intron (NM_001128103, intron 14 of 26)",-2509,"NM_001290786",269328,"Mm.32566","NM_172979","ENSMUSG00000050808","Muc15","4732460E09|D730046L02Rik|MUC-15","mucin 15","protein-coding"]
[2681,"chr9",101288851,101290693,"+",0,"NA","Intergenic","Intergenic",-37940,"NM_001161362",235542,"Mm.335386","NM_172144","ENSMUSG00000043154","Ppp2r3a","3222402P14Rik|A730042E07","protein phosphatase 2, regulatory subunit B'', alpha","protein-coding"]
[1622,"chr2",150857724,150859564,"+",0,"NA","intron (NM_024465, intron 1 of 12)","intron (NM_024465, intron 1 of 12)",46087,"NM_024465",76192,"Mm.112632","NM_024465","ENSMUSG00000032046","Abhd12","1500011G07Rik|6330583M11Rik|AI431047|AW547313","abhydrolase domain containing 12","protein-coding"]
[1260,"chr17",87531015,87532230,"+",0,"NA","Intergenic","Intergenic",-84687,"NM_007589",12314,"Mm.329243","NM_007589","ENSMUSG00000036438","Calm2","1500001E21Rik|AL024017","calmodulin 2","protein-coding"]
[874,"chr14",75876840,75877239,"+",0,"NA","Intergenic","RSINE1|SINE|B4",29116,"NR_028481",100303751,"Mm.484707","NR_028481","ENSMUSG00000065147","Snora31","MBI-161","small nucleolar RNA, H/ACA box 31","snoRNA"]
[975,"chr15",74769445,74769674,"+",0,"NA","Intergenic","Intergenic",-5992,"NM_010742",17068,"Mm.878","NM_010742","ENSMUSG00000034634","Ly6d","Ly-61|Ly61|Thb","lymphocyte antigen 6 complex, locus D","protein-coding"]
[493,"chr11",100962164,100963780,"+",0,"NA","intron (NM_008986, intron 1 of 1)","intron (NM_008986, intron 1 of 1)",7645,"NM_008986",19285,"Mm.21864","NM_008986","ENSMUSG00000004044","Ptrf","2310075E07Rik|AW546441|Cav-p60|Cavin","polymerase I and transcript release factor","protein-coding"]
[1708,"chr3",84428215,84429068,"+",0,"NA","Intergenic","Intergenic",-48720,"NR_040752",75309,"Mm.159497","NR_040752","ENSMUSG00000104004","4930565D16Rik","-","RIKEN cDNA 4930565D16 gene","ncRNA"]
[2220,"chr6",124804664,124806066,"+",0,"NA","Intergenic","PB1D10|SINE|Alu",-3296,"NM_001306051",14794,"Mm.261906","NM_013539","ENSMUSG00000038451","Spsb2","AI461677|C9|Grcc9|SSB2","splA/ryanodine receptor domain and SOCS box containing 2","protein-coding"]
[1436,"chr19",58522347,58522722,"+",0,"NA","intron (NM_029372, intron 3 of 8)","intron (NM_029372, intron 3 of 8)",10532,"NM_029372",75645,"Mm.159542","NM_029372","ENSMUSG00000025090","Ccdc172","1700011F14Rik","coiled-coil domain containing 172","protein-coding"]
[1911,"chr4",124708720,124708946,"+",0,"NA","TTS (NM_010213)","TTS (NM_010213)",-6028,"NM_029157",75062,"Mm.25779","NM_029157","ENSMUSG00000028902","Sf3a3","4930512K19Rik|60kDa","splicing factor 3a, subunit 3","protein-coding"]
[2528,"chr8",125557140,125557254,"+",0,"NA","Intergenic","Intergenic",-27441,"NR_015535",75930,"Mm.195663","NR_015535",null,"4930567H12Rik","4930579P07Rik","RIKEN cDNA 4930567H12 gene","ncRNA"]
[1591,"chr2",131436324,131437774,"+",0,"NA","intron (NR_037281, intron 1 of 2)","intron (NR_037281, intron 1 of 2)",-54813,"NM_001177834",228608,"Mm.136586","NM_145533","ENSMUSG00000027333","Smox","B130066H01Rik|PAO|PAOh1|SMO","spermine oxidase","protein-coding"]
[1677,"chr3",35721301,35722006,"+",0,"NA","Intergenic","Intergenic",-32485,"NM_029570",76295,"Mm.239416","NM_029570","ENSMUSG00000037400","Atp11b","1110019I14Rik|ATPIF|ATPIR|mKIAA0956","ATPase, class VI, type 11B","protein-coding"]
[2199,"chr6",113030710,113031087,"+",0,"NA","Intergenic","Intergenic",-15429,"NM_008188",14911,"Mm.781","NM_008188","ENSMUSG00000030264","Thumpd3","AW556087|Gt(ROSA)26asSor|Gtrosa26as","THUMP domain containing 3","protein-coding"]
[2174,"chr6",86771897,86772765,"+",0,"NA","intron (NM_013471, intron 1 of 12)","PB1D7|SINE|Alu",21253,"NM_013471",11746,"Mm.259702","NM_013471","ENSMUSG00000029994","Anxa4","AI265406|AIV|AW106930|Anx4|Xanx-4","annexin A4","protein-coding"]
[1320,"chr18",61570450,61570583,"+",0,"NA","intron (NM_146087, intron 4 of 9)","intron (NM_146087, intron 4 of 9)",14934,"NM_146087",93687,"Mm.26908","NM_146087","ENSMUSG00000024576","Csnk1a1","2610208K14Rik|4632404G05Rik|5430427P18Rik|CK1a|Csnk1a","casein kinase 1, alpha 1","protein-coding"]
[1026,"chr15",101070233,101071977,"+",0,"NA","Intergenic","Intergenic",-16706,"NM_001214911",668225,"Mm.385011","NM_001214911","ENSMUSG00000095440","Fignl2","EG668225","fidgetin-like 2","protein-coding"]
[1390,"chr19",25341565,25343442,"+",0,"NA","intron (NM_181404, intron 3 of 13)","B1F|SINE|Alu",105301,"NM_181404",107351,"Mm.260722","NM_181404","ENSMUSG00000032702","Kank1","A930031B09Rik|AU015049|AW121052|Ankrd15|D330024H06Rik|mKIAA0172","KN motif and ankyrin repeat domains 1","protein-coding"]
[1993,"chr5",24266608,24266730,"+",0,"NA","Intergenic","Intergenic",9141,"NR_030454",735274,null,"NR_030454","ENSMUSG00000106252","Mir684-1","Mirn684-1","microRNA 684-1","ncRNA"]
[1893,"chr4",111953957,111954176,"+",0,"NA","Intergenic","Intergenic",-18861,"NM_177818",328505,"Mm.226771","NM_177818","ENSMUSG00000049214","Skint7","C130057D23Rik","selection and upkeep of intraepithelial T cells 7","protein-coding"]
[1469,"chr2",25174915,25175334,"+",0,"NA","Intergenic","Intergenic",-5634,"NM_025980",67122,"Mm.46539","NM_025980","ENSMUSG00000078202","Nrarp","2700054M22Rik","Notch-regulated ankyrin repeat protein","protein-coding"]
[1499,"chr2",32903359,32904166,"+",0,"NA","intron (NM_146119, intron 1 of 13)","intron (NM_146119, intron 1 of 13)",27628,"NM_146119",227737,"Mm.301646","NM_146119","ENSMUSG00000026796","Fam129b","9130404D14Rik","family with sequence similarity 129, member B","protein-coding"]
[1646,"chr2",165855330,165855594,"+",0,"NA","intron (NM_001291158, intron 2 of 23)","B1_Mur2|SINE|Alu",2711,"NM_001252585",228880,"Mm.227598","NM_027230","ENSMUSG00000039671","Zmynd8","1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7","zinc finger, MYND-type containing 8","protein-coding"]
[400,"chr11",61679417,61679589,"+",0,"NA","intron (NM_001033227, intron 10 of 15)","intron (NM_001033227, intron 10 of 15)",-4907,"NM_178618",69640,"Mm.458559","NM_178618","ENSMUSG00000042377","Fam83g","2310040C09Rik|AI506990|wly","family with sequence similarity 83, member G","protein-coding"]
[534,"chr11",121601738,121601909,"+",0,"NA","intron (NM_029878, intron 29 of 38)","intron (NM_029878, intron 29 of 38)",71328,"NM_178664",210004,"Mm.386847","NM_178664","ENSMUSG00000046605","B3gntl1","6030413G23Rik","UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1","protein-coding"]
[746,"chr13",54606789,54607205,"+",0,"NA","intron (NM_028870, intron 1 of 4)","intron (NM_028870, intron 1 of 4)",4275,"NM_028870",74325,"Mm.290026","NM_028870","ENSMUSG00000047547","Cltb","2310046E19Rik","clathrin, light polypeptide (Lcb)","protein-coding"]
[919,"chr15",8568594,8570093,"+",0,"NA","Intergenic","CpG",-124880,"NM_201232",71175,"Mm.240329","NM_027707","ENSMUSG00000022141","Nipbl","Idn3","Nipped-B homolog (Drosophila)","protein-coding"]
[744,"chr13",53734972,53735125,"+",0,"NA","Intergenic","Intergenic",86463,"NR_131010",75252,"Mm.401989","NR_131010",null,"4930555G21Rik","-","RIKEN cDNA 4930555G21 gene","ncRNA"]
[1268,"chr18",4349550,4350665,"+",0,"NA","intron (NM_007746, intron 1 of 7)","intron (NM_007746, intron 1 of 7)",2846,"NM_007746",26410,"Mm.3275","NM_007746","ENSMUSG00000024235","Map3k8","Cot|Cot/Tpl2|Est|Estf|Tpl-2|Tpl2|c-COT","mitogen-activated protein kinase kinase kinase 8","protein-coding"]
[633,"chr12",84175190,84175379,"+",0,"NA","intron (NM_001163501, intron 1 of 12)","intron (NM_001163501, intron 1 of 12)",18731,"NM_001163502",238317,"Mm.31256","NM_001163501","ENSMUSG00000042507","Elmsan1","9430029N19Rik|C130039O16Rik|Gm260","ELM2 and Myb/SANT-like domain containing 1","protein-coding"]
[1372,"chr19",9079360,9081193,"+",0,"NA","Intergenic","Intergenic",7680,"NM_011681",22287,"Mm.2258","NM_011681","ENSMUSG00000024653","Scgb1a1","CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg","secretoglobin, family 1A, member 1 (uteroglobin)","protein-coding"]
[151,"chr1",153126322,153127498,"+",0,"NA","exon (NM_008485, exon 23 of 24)","exon (NM_008485, exon 23 of 24)",59537,"NM_008485",16782,"Mm.329272","NM_008485","ENSMUSG00000026479","Lamc2","AA589349","laminin, gamma 2","protein-coding"]
[1977,"chr4",150746571,150746784,"+",0,"NA","Intergenic","Intergenic",-94503,"NM_173774",242773,"Mm.29280","NM_173774",null,"Slc45a1","C230078B22|Dnb5","solute carrier family 45, member 1","protein-coding"]
[2023,"chr5",64436692,64438455,"+",0,"NA","Intergenic","Intergenic",30369,"NR_040681",69999,"Mm.261413","NR_040681","ENSMUSG00000100911","1700027F09Rik","-","RIKEN cDNA 1700027F09 gene","ncRNA"]
[1669,"chr3",13640692,13640802,"+",0,"NA","intron (NR_040598, intron 1 of 3)","intron (NR_040598, intron 1 of 3)",12118,"NR_040598",75203,"Mm.490940","NR_040598",null,"4930539N22Rik","-","RIKEN cDNA 4930539N22 gene","ncRNA"]
[1825,"chr4",11089367,11091281,"+",0,"NA","Intergenic","Intergenic",-14119,"NM_001085493",76947,"Mm.275265","NM_001085493","ENSMUSG00000050323","Ndufaf6","2310030N02Rik","NADH dehydrogenase (ubiquinone) complex I, assembly factor 6","protein-coding"]
[1285,"chr18",20553814,20554292,"+",0,"NA","Intergenic","Intergenic",-4063,"NM_007883",13511,"Mm.345891","NM_007883","ENSMUSG00000044393","Dsg2","AA408168|D18Ertd293e","desmoglein 2","protein-coding"]
[1952,"chr4",139481228,139481438,"+",0,"NA","intron (NM_001160319, intron 102 of 105)","intron (NM_001160319, intron 102 of 105)",-49215,"NM_183148",212632,"Mm.30464","NM_183148","ENSMUSG00000041025","Iffo2","C79267","intermediate filament family orphan 2","protein-coding"]
[287,"chr10",78420827,78422105,"+",0,"NA","Intergenic","Intergenic",-4204,"NM_007793",13014,"Mm.6095","NM_007793","ENSMUSG00000005054","Cstb","AA960480|Stfb","cystatin B","protein-coding"]
[475,"chr11",99077490,99077682,"+",0,"NA","intron (NM_172564, intron 4 of 12)","RMER4A|LTR|ERVK",11720,"NM_172564",217169,"Mm.262067","NM_172564","ENSMUSG00000017607","Tns4","9930017A07Rik|AA589547|AU016405|Cten","tensin 4","protein-coding"]
[2595,"chr9",54642745,54643197,"+",0,"NA","intron (NM_053178, intron 1 of 13)","intron (NM_053178, intron 1 of 13)",18914,"NM_053178",94180,"Mm.20592","NM_053178","ENSMUSG00000032281","Acsbg1","BG1|Bgm|E230019G03Rik|Lpd|R75185|mKIAA0631","acyl-CoA synthetase bubblegum family member 1","protein-coding"]
[932,"chr15",36883765,36884710,"+",0,"NA","Intergenic","Intergenic",-87308,"NM_001253806",22631,"Mm.3360","NM_011740","ENSMUSG00000022285","Ywhaz","1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854","tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide","protein-coding"]
[1549,"chr2",79696526,79699948,"+",0,"NA","Intergenic","Intergenic",-9543,"NM_172420",75276,"Mm.257373","NM_172420","ENSMUSG00000034683","Ppp1r1c","4930565M23Rik|4930579P15Rik","protein phosphatase 1, regulatory (inhibitor) subunit 1C","protein-coding"]
[1959,"chr4",141740340,141742738,"+",0,"NA","Intergenic","B3|SINE|B2",-5136,"NM_001081408",75986,"Mm.30032","NM_001081408","ENSMUSG00000040706","Agmat","5033405N08Rik","agmatine ureohydrolase (agmatinase)","protein-coding"]
[515,"chr11",113560069,113560209,"+",0,"NA","intron (NM_027216, intron 2 of 9)","intron (NM_027216, intron 2 of 9)",5676,"NM_001166503",69806,"Mm.341021","NM_027216","ENSMUSG00000041654","Slc39a11","1810074D23Rik","solute carrier family 39 (metal ion transporter), member 11","protein-coding"]
[1525,"chr2",60864126,60866286,"+",0,"NA","intron (NM_020296, intron 1 of 13)","intron (NM_020296, intron 1 of 13)",16232,"NM_001141932",56878,"Mm.259667","NM_020296","ENSMUSG00000026970","Rbms1","2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1","RNA binding motif, single stranded interacting protein 1","protein-coding"]
[2545,"chr9",14662039,14663342,"+",0,"NA","Intergenic","Intergenic",-47690,"NM_001081395",75723,"Mm.159552","NM_001081395","ENSMUSG00000013076","Amotl1","2310010G08Rik|2310067L22Rik|4932416D09Rik|JEAP|mFLJ00155","angiomotin-like 1","protein-coding"]
[1242,"chr17",78256125,78256239,"+",0,"NA","intron (NM_015800, intron 2 of 16)","intron (NM_015800, intron 2 of 16)",55934,"NM_015800",50766,"Mm.311912","NM_015800","ENSMUSG00000024074","Crim1","AU015004","cysteine rich transmembrane BMP regulator 1 (chordin like)","protein-coding"]
[138,"chr1",135898608,135902220,"+",0,"NA","intron (NM_001313701, intron 2 of 13)","intron (NM_001313701, intron 2 of 13)",18793,"NM_001313701",18772,"Mm.4494","NM_019645","ENSMUSG00000026413","Pkp1","-","plakophilin 1","protein-coding"]
[1107,"chr16",51938692,51939106,"+",0,"NA","Intergenic","Intergenic",-92650,"NM_001033238",208650,"Mm.328206","NM_001033238","ENSMUSG00000022637","Cblb","AI429560|AI851073|Cbl-b","Casitas B-lineage lymphoma b","protein-coding"]
[1208,"chr17",35813832,35813998,"+",0,"NA","Intergenic","Intergenic",-7798,"NM_133662",15937,"Mm.25613","NM_133662","ENSMUSG00000003541","Ier3","AI663993|IEX-1|cI-3|gly96","immediate early response 3","protein-coding"]
[1874,"chr4",83354854,83355888,"+",0,"NA","Intergenic","Intergenic",-31182,"NM_027238",69863,"Mm.5540","NM_025782","ENSMUSG00000038172","Ttc39b","1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585","tetratricopeptide repeat domain 39B","protein-coding"]
[1803,"chr3",136703490,136705943,"+",0,"NA","intron (NM_001293622, intron 1 of 12)","intron (NM_001293622, intron 1 of 12)",34650,"NM_001293622",19055,"Mm.331389","NM_008913","ENSMUSG00000028161","Ppp3ca","2900074D19Rik|CN|Caln|Calna|CnA","protein phosphatase 3, catalytic subunit, alpha isoform","protein-coding"]
[724,"chr13",40897826,40897943,"+",0,"NA","intron (NM_008105, intron 1 of 2)","intron (NM_008105, intron 1 of 2)",11126,"NM_008105",14538,"Mm.314757","NM_008105","ENSMUSG00000021360","Gcnt2","5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC","glucosaminyl (N-acetyl) transferase 2, I-branching enzyme","protein-coding"]
[1201,"chr17",32162490,32162622,"+",0,"NA","intron (NM_008716, intron 2 of 32)","CpG",4296,"NM_008716",18131,"Mm.439741","NM_008716","ENSMUSG00000038146","Notch3","AW229011|N3|hpbk","notch 3","protein-coding"]
[519,"chr11",116257614,116257753,"+",0,"NA","intron (NM_146032, intron 8 of 15)","intron (NM_146032, intron 8 of 15)",16534,"NM_146032",217337,"Mm.29655","NM_146032","ENSMUSG00000020780","Srp68","2610024I03Rik","signal recognition particle 68","protein-coding"]
[1195,"chr17",31073608,31073812,"+",0,"NA","intron (NM_009593, intron 2 of 14)","intron (NM_009593, intron 2 of 14)",16016,"NM_009593",11307,"Mm.15691","NM_009593",null,"Abcg1","AW413978|Abc8|White","ATP-binding cassette, sub-family G (WHITE), member 1","protein-coding"]
[17,"chr1",38320859,38322141,"+",0,"NA","intron (NM_001290814, intron 7 of 21)","intron (NM_001290814, intron 7 of 21)",-191838,"NM_019570",56210,"Mm.389103","NM_019570","ENSMUSG00000026082","Rev1","1110027I23Rik|AU022044|Rev1l","REV1 homolog (S. cerevisiae)","protein-coding"]
[2451,"chr8",72144849,72147046,"+",0,"NA","intron (NM_001001491, intron 4 of 7)","intron (NM_001001491, intron 4 of 7)",10655,"NM_001001491",326618,"Mm.295124","NM_001001491","ENSMUSG00000031799","Tpm4","2610528G24Rik|Tpm4.2|Tpm4.2cy","tropomyosin 4","protein-coding"]
[1327,"chr18",62169613,62169865,"+",0,"NA","Intergenic","Intergenic",10242,"NM_007420",11555,"Mm.5598","NM_007420","ENSMUSG00000045730","Adrb2","Adrb-2|Badm|Gpcr7","adrenergic receptor, beta 2","protein-coding"]
[2192,"chr6",108442590,108442744,"+",0,"NA","intron (NM_010585, intron 44 of 61)","intron (NM_010585, intron 44 of 61)",-47076,"NR_106121",102465766,null,"NR_106121","ENSMUSG00000105697","Mir7661","mmu-mir-7661","microRNA 7661","ncRNA"]
[1274,"chr18",11978005,11978183,"+",0,"NA","Intergenic","Intergenic",-137656,"NR_035447",100316686,null,"NR_035447","ENSMUSG00000084565","Mir1901","Mirn1901|mmu-mir-1901","microRNA 1901","ncRNA"]
[2667,"chr9",94607229,94609057,"+",0,"NA","Intergenic","Intergenic",-61749,"NM_177909",331004,"Mm.326125","NM_177909","ENSMUSG00000031129","Slc9a9","5730527A11Rik|9930105B05|AI854429|Nhe9","solute carrier family 9 (sodium/hydrogen exchanger), member 9","protein-coding"]
[110,"chr1",130769584,130772302,"+",0,"NA","Intergenic","Intergenic",-29959,"NM_001170632",64435,"Mm.31821","NM_144960","ENSMUSG00000026415","Fcamr","-","Fc receptor, IgA, IgM, high affinity","protein-coding"]
[333,"chr10",116760853,116761433,"+",0,"NA","Intergenic","Intergenic",31890,"NR_131036",75878,"Mm.370607","NR_131036",null,"4930579P08Rik","-","RIKEN cDNA 4930579P08 gene","ncRNA"]
[1995,"chr5",24963306,24963454,"+",0,"NA","intron (NM_145401, intron 3 of 15)","intron (NM_145401, intron 3 of 15)",32373,"NM_001310480",108099,"Mm.33649","NM_145401","ENSMUSG00000028944","Prkag2","2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS","protein kinase, AMP-activated, gamma 2 non-catalytic subunit","protein-coding"]
[2356,"chr7",109629292,109630563,"+",0,"NA","Intergenic","B3A|SINE|B2",-12780,"NM_029811",76954,"Mm.252009","NM_029811","ENSMUSG00000031024","St5","2010004M01Rik|2610305K15Rik","suppression of tumorigenicity 5","protein-coding"]
[2210,"chr6",120173335,120174631,"+",0,"NA","intron (NM_016718, intron 1 of 3)","PB1D10|SINE|Alu",80603,"NM_016718",29862,"Mm.103668","NM_016718","ENSMUSG00000041377","Ninj2","-","ninjurin 2","protein-coding"]
[2658,"chr9",83803888,83804079,"+",0,"NA","intron (NM_148941, intron 1 of 5)","intron (NM_148941, intron 1 of 5)",2322,"NM_148941",83603,"Mm.83949","NM_148941","ENSMUSG00000032262","Elovl4","-","elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4","protein-coding"]
[646,"chr12",99351640,99352951,"+",0,"NA","intron (NM_183186, intron 2 of 5)","intron (NM_183186, intron 2 of 5)",97779,"NM_183186",71375,"Mm.341972","NM_183186","ENSMUSG00000033713","Foxn3","5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1","forkhead box N3","protein-coding"]
[446,"chr11",94274968,94275784,"+",0,"NA","Intergenic","Intergenic",-32797,"NM_181819",278507,"Mm.342216","NM_181819","ENSMUSG00000044177","Wfikkn2","2610304F08Rik|AY100450|Gasp1|WFIKKNRP","WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2","protein-coding"]
[2181,"chr6",92381535,92381812,"+",0,"NA","intron (NM_001134460, intron 7 of 7)","intron (NM_001134460, intron 7 of 7)",99719,"NM_001134460",243548,"Mm.248820","NM_001081146","ENSMUSG00000030020","Prickle2","6230400G14Rik|6720451F06Rik|mpk2","prickle homolog 2 (Drosophila)","protein-coding"]
[2229,"chr6",128105096,128106240,"+",0,"NA","intron (NM_175414, intron 1 of 8)","intron (NM_175414, intron 1 of 8)",37910,"NM_175414",109246,"Mm.21814","NM_175414","ENSMUSG00000030352","Tspan9","6720474K14Rik|9430079M16Rik|AU018597","tetraspanin 9","protein-coding"]
[1220,"chr17",46877084,46877382,"+",0,"NA","Intergenic","B4A|SINE|B4",-13388,"NM_178385",72726,"Mm.33780","NM_178385","ENSMUSG00000036430","Tbcc","2810055C19Rik","tubulin-specific chaperone C","protein-coding"]
[1582,"chr2",120140355,120140565,"+",0,"NA","intron (NM_133838, intron 1 of 5)","intron (NM_133838, intron 1 of 5)",14115,"NM_133838",98878,"Mm.132226","NM_133838","ENSMUSG00000027293","Ehd4","2210022F10Rik|AI197390|AI846352|AV006278|Past2","EH-domain containing 4","protein-coding"]
[1599,"chr2",137605209,137605713,"+",0,"NA","Intergenic","Intergenic",-488941,"NM_013822",16449,"Mm.22398","NM_013822","ENSMUSG00000027276","Jag1","ABE2|Gsfabe2|Htu|Ozz|Ser-1","jagged 1","protein-coding"]
[2306,"chr7",67459616,67459901,"+",0,"NA","Intergenic","Intergenic",-86900,"NM_001291195",17258,"Mm.132788","NM_001033713","ENSMUSG00000030557","Mef2a","A430079H05Rik","myocyte enhancer factor 2A","protein-coding"]
[1149,"chr16",95741627,95742349,"+",0,"NA","Intergenic","Intergenic",39581,"NM_011809",23872,"Mm.290207","NM_011809","ENSMUSG00000022895","Ets2","AU022856|Ets-2","E26 avian leukemia oncogene 2, 3' domain","protein-coding"]
[2652,"chr9",78622314,78625748,"+",0,"NA","intron (NM_153098, intron 2 of 32)","PB1D7|SINE|Alu",8485,"NM_153098",235505,"Mm.32955","NM_153098","ENSMUSG00000046186","Cd109","9930012E15Rik|AI480638|GARP","CD109 antigen","protein-coding"]
[2337,"chr7",84185065,84185258,"+",0,"NA","Intergenic","Intergenic",-33268,"NM_133722",70178,"Mm.23914","NM_133722","ENSMUSG00000038459","Abhd17c","2210412D01Rik|AL023007|Fam108c|Fam108c1","abhydrolase domain containing 17C","protein-coding"]
[2603,"chr9",62828285,62828395,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-10447,"NM_001033175",76524,"Mm.283636","NM_001033175","ENSMUSG00000032245","Cln6","1810065L06Rik|AW743417|D9Bwg1455e|nclf","ceroid-lipofuscinosis, neuronal 6","protein-coding"]
[2283,"chr7",28953161,28953575,"+",0,"NA","intron (NM_021895, intron 1 of 20)","intron (NM_021895, intron 1 of 20)",8912,"NM_021895",60595,"Mm.81144","NM_021895","ENSMUSG00000054808","Actn4","C77391","actinin alpha 4","protein-coding"]
[2243,"chr6",136467604,136468236,"+",0,"NA","Intergenic","Intergenic",-50931,"NM_019426",54343,"Mm.173271","NM_019426","ENSMUSG00000030213","Atf7ip","2610204M12Rik|AM|Mcaf1","activating transcription factor 7 interacting protein","protein-coding"]
[2407,"chr8",13748031,13748166,"+",0,"NA","Intergenic","RMER12|LTR|ERVK",-9592,"NM_027276",69957,"Mm.182412","NM_027276","ENSMUSG00000038416","Cdc16","2700071J12Rik|2810431D22Rik|APC6","CDC16 cell division cycle 16","protein-coding"]
[2695,"chr9",108035831,108037007,"+",0,"NA","intron (NM_013785, intron 3 of 5)","B1_Mus1|SINE|Alu",-12871,"NM_177910",331026,"Mm.22554","NM_177910","ENSMUSG00000070284","Gmppb","AI317178|E430010H19","GDP-mannose pyrophosphorylase B","protein-coding"]
[1087,"chr16",28879172,28880518,"+",0,"NA","intron (NM_177718, intron 1 of 1)","intron (NM_177718, intron 1 of 1)",49853,"NM_177718",239796,"Mm.155887","NM_177718","ENSMUSG00000051065","Mb21d2","1600021P15Rik|A430031N04|C87006","Mab-21 domain containing 2","protein-coding"]
[1288,"chr18",24174605,24174862,"+",0,"NA","Intergenic","Intergenic",-30611,"NM_013814",14423,"Mm.30249","NM_013814","ENSMUSG00000000420","Galnt1","-","UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1","protein-coding"]
[810,"chr13",112071613,112072693,"+",0,"NA","Intergenic","Intergenic",204217,"NR_130345",102636620,"Mm.402328","NR_130345","ENSMUSG00000086111","Gm15326","OTTMUSG00000020187","predicted gene 15326","ncRNA"]
[1238,"chr17",72132544,72132788,"+",0,"NA","intron (NM_007439, intron 4 of 28)","intron (NM_007439, intron 4 of 28)",350719,"NM_030179",78785,"Mm.196382","NM_030179","ENSMUSG00000024059","Clip4","1700024K14Rik|1700074B05Rik|4833417L20Rik|5830409B12Rik|Rsnl2","CAP-GLY domain containing linker protein family, member 4","protein-coding"]
[33,"chr1",58366421,58367435,"+",0,"NA","intron (NM_001008419, intron 34 of 35)","intron (NM_001008419, intron 34 of 35)",-26208,"NM_025824",66882,"Mm.21848","NM_025824","ENSMUSG00000051223","Bzw1","1200015E15Rik|mKIAA0005","basic leucine zipper and W2 domains 1","protein-coding"]
[1587,"chr2",129633086,129633966,"+",0,"NA","Intergenic","L2b|LINE|L2",40357,"NM_001291022",19261,"Mm.1682","NM_007547","ENSMUSG00000037902","Sirpa","AI835480|Bit|CD172a|P84|Ptpns1|SHP-1|SHPS-1|SIRP","signal-regulatory protein alpha","protein-coding"]
[1559,"chr2",91723254,91723418,"+",0,"NA","Intergenic","Intergenic",-6802,"NM_172669",228361,"Mm.436667","NM_172669","ENSMUSG00000040506","Ambra1","2310079H06Rik|A130023A14|AA474864|AV021921|D030051N19Rik|mKIAA1736","autophagy/beclin 1 regulator 1","protein-coding"]
[7,"chr1",24108507,24109535,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-8680,"NM_026604",68187,"Mm.87130","NM_026604","ENSMUSG00000026153","Fam135a","4921533L14Rik|AI256732|AI835491","family with sequence similarity 135, member A","protein-coding"]
[1793,"chr3",127893614,127893826,"+",0,"NA","intron (NM_027482, intron 1 of 1)","intron (NM_027482, intron 1 of 1)",2603,"NM_027482",70617,"Mm.317049","NM_027482",null,"5730508B09Rik","2700063A17Rik|C80506","RIKEN cDNA 5730508B09 gene","protein-coding"]
[227,"chr10",18351220,18351768,"+",0,"NA","Intergenic","Intergenic",-56181,"NM_173390",215819,"Mm.297971","NM_173390","ENSMUSG00000039835","Nhsl1","5730409E15Rik|A630035H13Rik|A730096F01|BC013565|D10Bwg0940e|mKIAA1357","NHS-like 1","protein-coding"]
[1701,"chr3",61035954,61036192,"+",0,"NA","Intergenic","Intergenic",33288,"NM_001282016",18441,"Mm.281452","NM_008772","ENSMUSG00000027765","P2ry1","P2Y1","purinergic receptor P2Y, G-protein coupled 1","protein-coding"]
[1860,"chr4",56581326,56583389,"+",0,"NA","Intergenic","Intergenic",159068,"NM_025271",11471,"Mm.251434","NM_025271","ENSMUSG00000070980","Actl7b","Tact1","actin-like 7b","protein-coding"]
[2443,"chr8",64643292,64644099,"+",0,"NA","intron (NM_013494, intron 1 of 8)","intron (NM_013494, intron 1 of 8)",49345,"NM_013494",12876,"Mm.31395","NM_013494","ENSMUSG00000037852","Cpe","CPH|Cph-1|Cph1|R74677|fat","carboxypeptidase E","protein-coding"]
[1937,"chr4",134378911,134380383,"+",0,"NA","Intergenic","B4A|SINE|B4",-7100,"NM_019578",56219,"Mm.30978","NM_019578","ENSMUSG00000028838","Extl1","D430033M16Rik","exostoses (multiple)-like 1","protein-coding"]
[2013,"chr5",43693028,43693595,"+",0,"NA","intron (NM_172274, intron 12 of 39)","intron (NM_172274, intron 12 of 39)",30932,"NM_172274",231214,"Mm.44434","NM_172274","ENSMUSG00000039765","Cc2d2a","5730509K17Rik|b2b1035Clo","coiled-coil and C2 domain containing 2A","protein-coding"]
[255,"chr10",44574471,44574676,"+",0,"NA","Intergenic","Intergenic",-115825,"NM_007548",12142,"Mm.4800","NM_007548","ENSMUSG00000038151","Prdm1","Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo","PR domain containing 1, with ZNF domain","protein-coding"]
[264,"chr10",63176635,63178183,"+",0,"NA","intron (NM_182992, intron 2 of 19)","intron (NM_182992, intron 2 of 19)",26543,"NM_182992",68802,"Mm.259767","NM_182992","ENSMUSG00000020067","Mypn","1110056A04Rik|9830112J03|AI853556|mKIAA4170","myopalladin","protein-coding"]
[806,"chr13",110910293,110910430,"+",0,"NA","Intergenic","Intergenic",-6515,"NR_131194",102636142,"Mm.417611","NR_131194",null,"4930526H09Rik","-","RIKEN cDNA 4930526H09 gene","ncRNA"]
[2230,"chr6",128843457,128843711,"+",0,"NA","Intergenic","Intergenic",-17269,"NM_030599",80782,"Mm.6180","NM_030599","ENSMUSG00000079298","Klrb1b","Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d","killer cell lectin-like receptor subfamily B member 1B","protein-coding"]
[1885,"chr4",101202996,101203241,"+",0,"NA","intron (NM_146145, intron 1 of 24)","intron (NM_146145, intron 1 of 24)",62164,"NM_146145",16451,"Mm.289657","NM_146145","ENSMUSG00000028530","Jak1","AA960307|BAP004|C130039L05Rik","Janus kinase 1","protein-coding"]
[182,"chr1",180225738,180226299,"+",0,"NA","TTS (NM_001128605)","TTS (NM_001128605)",19932,"NM_011183",19165,"Mm.330850","NM_011183","ENSMUSG00000010609","Psen2","ALG-3|Ad4h|Alg3|PS-2|PS2|Psnl2|STM2","presenilin 2","protein-coding"]
[1817,"chr4",8872267,8872379,"+",0,"NA","Intergenic","Intergenic",181917,"NM_001277149",320790,"Mm.138792","NM_001033395","ENSMUSG00000041235","Chd7","A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis","chromodomain helicase DNA binding protein 7","protein-coding"]
[2707,"chr9",116208784,116208954,"+",0,"NA","Intergenic","Intergenic",-33506,"NM_009371",21813,"Mm.172346","NM_009371","ENSMUSG00000032440","Tgfbr2","1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII","transforming growth factor, beta receptor II","protein-coding"]
[556,"chr12",35832793,35833297,"+",0,"NA","Intergenic","Intergenic",-92576,"NM_207531",403205,"Mm.190508","NM_207531","ENSMUSG00000036231","Agr3","BCMP11|E030025L21Rik|Gm888","anterior gradient 3","protein-coding"]
[717,"chr13",39923080,39924330,"+",0,"NA","Intergenic","MER33|DNA|hAT-Charlie",364306,"NM_172143",218165,"Mm.364096","NM_172143","ENSMUSG00000047094","Ofcc1","opo","orofacial cleft 1 candidate 1","protein-coding"]
[815,"chr13",114639239,114639515,"+",0,"NA","intron (NR_045976, intron 3 of 6)","intron (NR_045976, intron 3 of 6)",32149,"NR_045976",75161,"Mm.50406","NM_175218","ENSMUSG00000051758","4930544M13Rik","-","RIKEN cDNA 4930544M13 gene","ncRNA"]
[671,"chr13",3777597,3780256,"+",0,"NA","Intergenic","B4|SINE|B4",25392,"NM_027416",70405,"Mm.20079","NM_027416","ENSMUSG00000063130","Calml3","2310068O22Rik|AI326174","calmodulin-like 3","protein-coding"]
[1511,"chr2",36226009,36228412,"+",0,"NA","Intergenic","Intergenic",-3216,"NM_008969",19224,"Mm.275434","NM_008969","ENSMUSG00000047250","Ptgs1","COX1|Cox-1|Cox-3|PGHS-1|PHS 1|Pghs1","prostaglandin-endoperoxide synthase 1","protein-coding"]
[2249,"chr6",136692408,136692685,"+",0,"NA","Intergenic","Intergenic",-30653,"NM_025806",66857,"Mm.3311","NM_025806","ENSMUSG00000030214","Plbd1","1100001H23Rik","phospholipase B domain containing 1","protein-coding"]
[167,"chr1",161913181,161915244,"+",0,"NA","Intergenic","Intergenic",-37551,"NM_172645",226551,"Mm.170002","NM_172645","ENSMUSG00000040297","Suco","4732491B11|AI848100|AU016931|Opt","SUN domain containing ossification factor","protein-coding"]
[2423,"chr8",24442368,24442582,"+",0,"NA","Intergenic","Intergenic",-3529,"NM_026931",69068,"Mm.25775","NM_026931",null,"1810011O10Rik","1110065B09Rik|AW121743|AW321058","RIKEN cDNA 1810011O10 gene","protein-coding"]
[692,"chr13",30652582,30652877,"+",0,"NA","Intergenic","RLTR25B|LTR|ERVK",-7330,"NM_001037955",105352,"Mm.289646","NM_134068","ENSMUSG00000069255","Dusp22","JKAP|JSP1|LMW-DSP2|MKPX","dual specificity phosphatase 22","protein-coding"]
[1605,"chr2",139563372,139563690,"+",0,"NA","intron (NM_175467, intron 5 of 12)","intron (NM_175467, intron 5 of 12)",69611,"NM_175467",228677,"Mm.100450","NM_175467","ENSMUSG00000039092","Sptlc3","C130053K05Rik","serine palmitoyltransferase, long chain base subunit 3","protein-coding"]
[663,"chr12",112585728,112585929,"+",0,"NA","Intergenic","Intergenic",-2956,"NM_198411",70435,"Mm.250193","NM_198411","ENSMUSG00000037679","Inf2","2610204M08Rik|AA589465|AW125550|EG629699","inverted formin, FH2 and WH2 domain containing","protein-coding"]
[2431,"chr8",35876689,35877181,"+",0,"NA","intron (NR_046181, intron 1 of 2)","intron (NR_046181, intron 1 of 2)",6022,"NR_046181",330737,"Mm.381743","NR_046181",null,"5430403N17Rik","5430403N17","RIKEN cDNA 5430403N17 gene","ncRNA"]
[1907,"chr4",123045970,123047230,"+",0,"NA","intron (NM_025873, intron 4 of 10)","intron (NM_025873, intron 4 of 10)",30003,"NM_025873",66966,"Mm.235030","NM_025873","ENSMUSG00000028653","Trit1","2310075G14Rik|AI314189|AI314635|AV099619|IPT|MOD5","tRNA isopentenyltransferase 1","protein-coding"]
[854,"chr14",61647446,61649361,"+",0,"NA","intron (NR_028264, intron 1 of 6)","CpG",-16293,"NR_029733",387174,null,"NR_029733","ENSMUSG00000093007","Mir15a","Mirn15a|mir-15a|mmu-mir-15a","microRNA 15a","ncRNA"]
[1945,"chr4",135876918,135877403,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-3314,"NM_026383",52830,"Mm.29159","NM_026383","ENSMUSG00000028675","Pnrc2","0610011E17Rik|D4Bwg0593e","proline-rich nuclear receptor coactivator 2","protein-coding"]
[969,"chr15",61991209,61991642,"+",0,"NA","Intergenic","Intergenic",6084,"NM_001177352",17869,"Mm.2444","NM_010849","ENSMUSG00000022346","Myc","AU016757|Myc2|Niard|Nird|bHLHe39","myelocytomatosis oncogene","protein-coding"]
[1174,"chr17",17845023,17846484,"+",0,"NA","intron (NM_008215, intron 4 of 4)","intron (NM_008215, intron 4 of 4)",9435,"NM_008215",15116,"Mm.255701","NM_008215","ENSMUSG00000003665","Has1","HAS","hyaluronan synthase1","protein-coding"]
[1946,"chr4",136433538,136433960,"+",0,"NA","intron (NM_001285484, intron 1 of 1)","intron (NM_001285484, intron 1 of 1)",9137,"NM_001285484",15552,"Mm.40573","NM_008309","ENSMUSG00000070687","Htr1d","5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db","5-hydroxytryptamine (serotonin) receptor 1D","protein-coding"]
[510,"chr11",110379907,110380076,"+",0,"NA","Intergenic","Intergenic",-19131,"NM_011943",26399,"Mm.14487","NM_011943","ENSMUSG00000020623","Map2k6","MEK6|MKK6|Prkmk6|SAPKK3","mitogen-activated protein kinase kinase 6","protein-coding"]
[393,"chr11",60357473,60358046,"+",0,"NA","intron (NM_029044, intron 2 of 13)","intron (NM_029044, intron 2 of 13)",4379,"NM_029044",74665,"Mm.133570","NM_029044","ENSMUSG00000056598","Lrrc48","4930449E07Rik","leucine rich repeat containing 48","protein-coding"]
[2276,"chr7",28382517,28383526,"+",0,"NA","Intergenic","Intergenic",-3793,"NM_011756",22695,"Mm.389856","NM_011756","ENSMUSG00000044786","Zfp36","Gos24|Nup475|TIS11D|TISII|Tis11|Ttp|Zfp-36","zinc finger protein 36","protein-coding"]
[1501,"chr2",34669473,34669659,"+",0,"NA","Intergenic","B1_Mur2|SINE|Alu",85666,"NM_025709",66691,"Mm.156452","NM_025709","ENSMUSG00000026867","Gapvd1","2010005B09Rik|4432404J10Rik|AW108497|Gapex-5|RAP6|RME-6|mKIAA1521","GTPase activating protein and VPS9 domains 1","protein-coding"]
[658,"chr12",108395246,108395948,"+",0,"NA","intron (NM_001286346, intron 1 of 21)","intron (NM_001286346, intron 1 of 21)",-15036,"NM_001043336",68519,"Mm.236645","NM_001043335","ENSMUSG00000058070","Eml1","1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAPL|heco","echinoderm microtubule associated protein like 1","protein-coding"]
[274,"chr10",68136962,68137480,"+",0,"NA","intron (NM_023598, intron 4 of 9)","intron (NM_023598, intron 4 of 9)",141505,"NM_023598",71371,"Mm.440357","NM_023598","ENSMUSG00000019947","Arid5b","4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta","AT rich interactive domain 5B (MRF1-like)","protein-coding"]
[549,"chr12",24552982,24553230,"+",0,"NA","intron (NM_020614, intron 12 of 14)","intron (NM_020614, intron 12 of 14)",-19181,"NM_001161406",195733,"Mm.263068","NM_145890","ENSMUSG00000020656","Grhl1","LBP-32|MGR|Tcfcp2l2","grainyhead-like 1 (Drosophila)","protein-coding"]
[877,"chr14",78584607,78584911,"+",0,"NA","intron (NR_104044, intron 23 of 27)","intron (NR_104044, intron 23 of 27)",44531,"NM_001253766",380921,"Mm.89591","NM_001081336","ENSMUSG00000034731","Dgkh","5930402B05Rik|D130015C16|DGK","diacylglycerol kinase, eta","protein-coding"]
[1508,"chr2",35490652,35491147,"+",0,"NA","Intergenic","Intergenic",-29450,"NM_001145821",14594,"Mm.281124","NM_010283","ENSMUSG00000035778","Ggta1","AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT","glycoprotein galactosyltransferase alpha 1, 3","protein-coding"]
[1128,"chr16",78247389,78247898,"+",0,"NA","Intergenic","Intergenic",7811,"NR_045698",100503619,"Mm.387531","NR_045698",null,"E330011O21Rik","-","RIKEN cDNA E330011O21 gene","ncRNA"]
[1771,"chr3",105088903,105089308,"+",0,"NA","Intergenic","Intergenic",22261,"NM_029228",75269,"Mm.307994","NM_029228","ENSMUSG00000051788","4930564D02Rik","-","RIKEN cDNA 4930564D02 gene","protein-coding"]
[946,"chr15",38937574,38937782,"+",0,"NA","intron (NM_080640, intron 1 of 1)","intron (NM_080640, intron 1 of 1)",3769,"NM_080640",118452,"Mm.233837","NM_080640",null,"Baalc","2810457D07Rik","brain and acute leukemia, cytoplasmic","protein-coding"]
[1724,"chr3",89196173,89196503,"+",0,"NA","Intergenic","Intergenic",-6587,"NM_001077411",14466,"Mm.5031","NM_008094","ENSMUSG00000028048","Gba","GBA1|GC|GCase|GLUC|betaGC","glucosidase, beta, acid","protein-coding"]
[1520,"chr2",59670195,59670349,"+",0,"NA","intron (NM_198294, intron 2 of 26)","intron (NM_198294, intron 2 of 26)",23503,"NM_001290659",66860,"Mm.27917","NM_198294","ENSMUSG00000035168","Tanc1","1200003E16Rik|Tanc|mKIAA1728","tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1","protein-coding"]
[2644,"chr9",77536761,77537395,"+",0,"NA","intron (NM_001146048, intron 1 of 13)","intron (NM_001146048, intron 1 of 13)",6981,"NM_172528",214345,"Mm.28534","NM_172528","ENSMUSG00000032352","Lrrc1","A430093J20Rik|AU016091|D030059I21|mKIAA4018","leucine rich repeat containing 1","protein-coding"]
[2148,"chr6",51057557,51062542,"+",0,"NA","Intergenic","Intergenic",209861,"NR_029719",387166,null,"NR_029719","ENSMUSG00000065505","Mir148a","Mirn148|Mirn148a|mir-148a","microRNA 148a","ncRNA"]
[250,"chr10",44016152,44016646,"+",0,"NA","Intergenic","Intergenic",-11553,"NM_172393",11630,"Mm.292082","NM_172393","ENSMUSG00000019866","Aim1","AI462491|AI463325","absent in melanoma 1","protein-coding"]
[303,"chr10",88346253,88346609,"+",0,"NA","intron (NM_027878, intron 1 of 6)","intron (NM_027878, intron 1 of 6)",10644,"NM_027878",71712,"Mm.35450","NM_027878","ENSMUSG00000020057","Dram1","1200002N14Rik|Dram","DNA-damage regulated autophagy modulator 1","protein-coding"]
[1361,"chr19",5814395,5817065,"+",0,"NA","Intergenic","Intergenic",-13059,"NR_002847",72289,"Mm.298256","NR_002847","ENSMUSG00000092341","Malat1","2210401K01Rik|9430072K23Rik|AI647968|Neat2","metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)","ncRNA"]
[614,"chr12",77179385,77181073,"+",0,"NA","Intergenic","L2b|LINE|L2",-57875,"NM_001252614",53618,"Mm.35628","NM_016893","ENSMUSG00000021065","Fut8","-","fucosyltransferase 8","protein-coding"]
[1765,"chr3",103055575,103056875,"+",0,"NA","intron (NM_001161854, intron 17 of 18)","intron (NM_001161854, intron 17 of 18)",-2060,"NM_010937",18176,"Mm.400954","NM_010937","ENSMUSG00000027852","Nras","AV095280|N-ras","neuroblastoma ras oncogene","protein-coding"]
[130,"chr1",135856739,135857124,"+",0,"NA","Intergenic","Intergenic",16070,"NM_001130176",21956,"Mm.247470","NM_011619","ENSMUSG00000026414","Tnnt2","Tnt|cTnT","troponin T2, cardiac","protein-coding"]
[53,"chr1",74240133,74240746,"+",0,"NA","intron (NM_029711, intron 1 of 9)","intron (NM_029711, intron 1 of 9)",3889,"NM_029711",76709,"Mm.337038","NM_029711","ENSMUSG00000006304","Arpc2","2210023N03Rik|34kDa|p34-Arc","actin related protein 2/3 complex, subunit 2","protein-coding"]
[1373,"chr19",9093598,9093889,"+",0,"NA","Intergenic","Intergenic",-5787,"NM_011681",22287,"Mm.2258","NM_011681","ENSMUSG00000024653","Scgb1a1","CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg","secretoglobin, family 1A, member 1 (uteroglobin)","protein-coding"]
[1465,"chr2",24341809,24343027,"+",0,"NA","intron (NM_031167, intron 1 of 4)","intron (NM_031167, intron 1 of 4)",-2873,"NM_001159562",16181,"Mm.882","NM_031167","ENSMUSG00000026981","Il1rn","F630041P17Rik|IL-1ra","interleukin 1 receptor antagonist","protein-coding"]
[1302,"chr18",37923515,37925157,"+",0,"NA","intron (NM_001305981, intron 1 of 28)","intron (NM_001305981, intron 1 of 28)",11087,"NM_001305980",13367,"Mm.195916","NM_007858","ENSMUSG00000024456","Diaph1","D18Wsu154e|Dia1|Diap1|Drf1|p140mDia","diaphanous related formin 1","protein-coding"]
[2239,"chr6",135192228,135193814,"+",0,"NA","non-coding (NR_040296, exon 5 of 5)","non-coding (NR_040296, exon 5 of 5)",4541,"NR_040296",100502888,"Mm.437844","NR_040296","ENSMUSG00000108239","Gm19434","-","predicted gene, 19434","ncRNA"]
[1397,"chr19",32196645,32198175,"+",0,"NA","intron (NM_001168525, intron 5 of 9)","LTR41|LTR|ERVL",13603,"NM_001168526",208449,"Mm.329810","NM_144792","ENSMUSG00000040451","Sgms1","9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23","sphingomyelin synthase 1","protein-coding"]
[941,"chr15",37198566,37199277,"+",0,"NA","Intergenic","Intergenic",-34115,"NM_026496",252973,"Mm.244612","NM_026496","ENSMUSG00000022286","Grhl2","0610015A08Rik|BOM|Tcfcp2l3","grainyhead-like 2 (Drosophila)","protein-coding"]
[583,"chr12",70544454,70545022,"+",0,"NA","intron (NR_037248, intron 2 of 4)","intron (NR_037248, intron 2 of 4)",91584,"NM_028339",72736,"Mm.204670","NM_028339","ENSMUSG00000021072","Tmx1","2810425A04Rik|AI465319|Txndc1","thioredoxin-related transmembrane protein 1","protein-coding"]
[2392,"chr7",139257619,139258028,"+",0,"NA","intron (NM_001098636, intron 2 of 2)","intron (NM_001098636, intron 2 of 2)",9341,"NM_001098636",101631,"Mm.334300","NM_001033206","ENSMUSG00000060260","Pwwp2b","AI594893|D7Ertd517e|D930023J19Rik|Pwwp2","PWWP domain containing 2B","protein-coding"]
[1879,"chr4",89361350,89361625,"+",0,"NA","intron (NR_132431, intron 2 of 9)","intron (NR_132431, intron 2 of 9)",-50455,"NM_007670",12579,"Mm.423094","NM_007670","ENSMUSG00000073802","Cdkn2b","AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b","cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)","protein-coding"]
[1824,"chr4",9071525,9072583,"+",0,"NA","Intergenic","RMER10B|LTR|ERVL",-197263,"NM_028940",74438,"Mm.473368","NM_028940","ENSMUSG00000041216","Clvs1","4933402J24Rik|Clvl1|Rlbp1l1","clavesin 1","protein-coding"]
[1869,"chr4",59496681,59497464,"+",0,"NA","intron (NM_144904, intron 6 of 14)","intron (NM_144904, intron 6 of 14)",52292,"NM_178164",230257,"Mm.331640","NM_144904","ENSMUSG00000028382","Ptbp3","5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1","polypyrimidine tract binding protein 3","protein-coding"]
[2342,"chr7",96242148,96242459,"+",0,"NA","intron (NM_001310760, intron 1 of 32)","intron (NM_001310760, intron 1 of 32)",-7121,"NR_030489",735284,null,"NR_030489","ENSMUSG00000076143","Mir708","Mirn708|mmu-mir-708","microRNA 708","ncRNA"]
[591,"chr12",70706446,70708989,"+",0,"NA","Intergenic","Intergenic",-117797,"NM_028127",319710,"Mm.2962","NM_028127","ENSMUSG00000048285","Frmd6","2610019M19Rik|4930488L10Rik|AW212977|Willin","FERM domain containing 6","protein-coding"]
[2304,"chr7",66756044,66756523,"+",0,"NA","intron (NM_001164201, intron 1 of 10)","intron (NM_001164201, intron 1 of 10)",12779,"NM_001164201",545975,"Mm.380104","NM_001164201","ENSMUSG00000030510","Cers3","4930550L11Rik|Gm488|Lass3|T3L","ceramide synthase 3","protein-coding"]
[832,"chr14",25526841,25527178,"+",0,"NA","intron (NM_001310666, intron 2 of 23)","intron (NM_001310666, intron 2 of 23)",-7430,"NR_037236",100526533,null,"NR_037236","ENSMUSG00000093081","Mir3075","mir-3075|mmu-mir-3075","microRNA 3075","ncRNA"]
[2341,"chr7",92775949,92776811,"+",0,"NA","intron (NM_029494, intron 1 of 4)","MIRb|SINE|MIR",34666,"NM_029494",75985,"Mm.323004","NM_029494","ENSMUSG00000030643","Rab30","5033421K01Rik|AI323892|Rsb30","RAB30, member RAS oncogene family","protein-coding"]
[2135,"chr6",35254615,35254951,"+",0,"NA","intron (NR_027875, intron 1 of 2)","intron (NR_027875, intron 1 of 2)",2051,"NR_027875",67705,"Mm.228046","NR_015608","ENSMUSG00000073155","1810058I24Rik","AI414869|AI848234","RIKEN cDNA 1810058I24 gene","ncRNA"]
[828,"chr14",21087394,21087584,"+",0,"NA","intron (NM_001243041, intron 1 of 10)","MTD|LTR|ERVL-MaLR",11337,"NM_001243041",11534,"Mm.188734","NM_134079","ENSMUSG00000039197","Adk","2310026J05Rik|5033405D03Rik|AI255373|AI987814|Ak","adenosine kinase","protein-coding"]
[276,"chr10",68238496,68239078,"+",0,"NA","intron (NM_023598, intron 3 of 9)","(CAAAAA)n|Simple_repeat|Simple_repeat",39939,"NM_023598",71371,"Mm.440357","NM_023598","ENSMUSG00000019947","Arid5b","4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta","AT rich interactive domain 5B (MRF1-like)","protein-coding"]
[102,"chr1",125525543,125527014,"+",0,"NA","Intergenic","Intergenic",-34738,"NM_028787",74150,"Mm.28654","NM_028787","ENSMUSG00000026342","Slc35f5","1300003P13Rik|AI646727","solute carrier family 35, member F5","protein-coding"]
[1920,"chr4",129033057,129033480,"+",0,"NA","Intergenic","Intergenic",-25003,"NM_029219",75234,"Mm.259672","NM_029219","ENSMUSG00000028793","Rnf19b","4930534K13Rik|4930555L03Rik|Ibrdc3","ring finger protein 19B","protein-coding"]
[2465,"chr8",83601953,83603018,"+",0,"NA","Intergenic","Intergenic",-5690,"NM_018808",81489,"Mm.282092","NM_018808","ENSMUSG00000005483","Dnajb1","0610007I11Rik|DjB1|HSPF1|Hdj1|Hsp40","DnaJ (Hsp40) homolog, subfamily B, member 1","protein-coding"]
[1831,"chr4",20195493,20195743,"+",0,"NA","intron (NM_001290410, intron 4 of 5)","intron (NM_001290410, intron 4 of 5)",153566,"NM_010281",14590,"Mm.20461","NM_010281",null,"Ggh","gamma-GH","gamma-glutamyl hydrolase","protein-coding"]
[2639,"chr9",76023000,76023638,"+",0,"NA","intron (NM_173731, intron 1 of 8)","Lx9|LINE|L1",8342,"NM_173731",208982,"Mm.82306","NM_173731","ENSMUSG00000007908","Hmgcll1","BC037381","3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1","protein-coding"]
[1218,"chr17",46267863,46268631,"+",0,"NA","intron (NM_001252475, intron 1 of 8)","intron (NM_001252475, intron 1 of 8)",14082,"NM_001111142",224813,"Mm.70999","NM_001111142","ENSMUSG00000071073","Lrrc73","Gm88","leucine rich repeat containing 73","protein-coding"]
[1404,"chr19",34021717,34022368,"+",0,"NA","intron (NM_001205349, intron 4 of 9)","intron (NM_001205349, intron 4 of 9)",13788,"NM_001205349",240633,"Mm.58924","NM_172837","ENSMUSG00000024771","Lipk","9930115F20|BC055815|Lipl2","lipase, family member K","protein-coding"]
[2398,"chr7",141896031,141896171,"+",0,"NA","intron (NM_023764, intron 1 of 5)","intron (NM_023764, intron 1 of 5)",6305,"NM_023764",54473,"Mm.103551","NM_023764","ENSMUSG00000025139","Tollip","4930403G24Rik|4931428G15Rik","toll interacting protein","protein-coding"]
[1543,"chr2",79510918,79511035,"+",0,"NA","Intergenic","Intergenic",-54340,"NM_010894",18012,"Mm.4636","NM_010894","ENSMUSG00000034701","Neurod1","BETA2|BHF-1|Neurod|bHLHa3","neurogenic differentiation 1","protein-coding"]
[259,"chr10",59578014,59578649,"+",0,"NA","intron (NM_001033259, intron 1 of 7)","intron (NM_001033259, intron 1 of 7)",38361,"NM_001033259",215999,"Mm.296470","NM_001033259","ENSMUSG00000009647","Mcu","2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64","mitochondrial calcium uniporter","protein-coding"]
[424,"chr11",75568340,75568618,"+",0,"NA","exon (NM_173388, exon 11 of 14)","exon (NM_173388, exon 11 of 14)",17050,"NR_039553",100628624,null,"NR_039553","ENSMUSG00000093100","Mir3971","mmu-mir-3971|mu-mir-3971","microRNA 3971","ncRNA"]
[1625,"chr2",153238875,153239438,"+",0,"NA","intron (NM_018807, intron 1 of 2)","intron (NM_018807, intron 1 of 2)",2202,"NM_018807",54711,"Mm.103199","NM_018807","ENSMUSG00000051413","Plagl2","AU018672|AW552839|mKIAA0198","pleiomorphic adenoma gene-like 2","protein-coding"]
[163,"chr1",160059531,160060505,"+",0,"NA","intron (NM_001162896, intron 1 of 2)","intron (NM_001162896, intron 1 of 2)",15638,"NM_001162896",67647,"Mm.171518","NM_001024470","ENSMUSG00000090394","4930523C07Rik","-","RIKEN cDNA 4930523C07 gene","protein-coding"]
[1106,"chr16",49970991,49971106,"+",0,"NA","Intergenic","Intergenic",-9412,"NR_045001",628951,"Mm.428032","NR_045001",null,"Gm6936","-","predicted gene 6936","ncRNA"]
[1402,"chr19",32304653,32305049,"+",0,"NA","intron (NM_144792, intron 2 of 9)","intron (NM_144792, intron 2 of 9)",44465,"NM_001168525",208449,"Mm.329810","NM_144792","ENSMUSG00000040451","Sgms1","9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23","sphingomyelin synthase 1","protein-coding"]
[1836,"chr4",33261963,33262488,"+",0,"NA","Intergenic","Intergenic",-13438,"NM_001033225",108767,"Mm.27769","NM_001033225","ENSMUSG00000040128","Pnrc1","5730463C12Rik|B4-2|PRR2|Prol2","proline-rich nuclear receptor coactivator 1","protein-coding"]
[2402,"chr7",143834396,143834941,"+",0,"NA","intron (NM_007856, intron 2 of 8)","RSINE1|SINE|B4",11501,"NM_007856",13360,"Mm.249342","NM_007856","ENSMUSG00000058454","Dhcr7","AA409147","7-dehydrocholesterol reductase","protein-coding"]
[1531,"chr2",65232889,65233168,"+",0,"NA","intron (NM_177025, intron 1 of 13)","intron (NM_177025, intron 1 of 13)",5598,"NM_177025",319876,"Mm.34159","NM_027225","ENSMUSG00000034903","Cobll1","1810047P18Rik|Coblr1|D430044D16Rik","Cobl-like 1","protein-coding"]
[2731,"chrX",8230148,8230396,"+",0,"NA","Intergenic","ORR1B2-int|LTR|ERVL-MaLR",22134,"NM_133991",54632,"Mm.327529","NM_133991","ENSMUSG00000031171","Ftsj1","AI931847|Ftsj|Ftsjl|Sfc12","FtsJ homolog 1 (E. coli)","protein-coding"]
[1841,"chr4",41051838,41052330,"+",0,"NA","Intergenic","Intergenic",-3948,"NM_007473",11832,"Mm.8728","NM_007473","ENSMUSG00000028427","Aqp7","AQP7L|AQPap","aquaporin 7","protein-coding"]
[347,"chr11",8582586,8583199,"+",0,"NA","intron (NM_001083587, intron 3 of 30)","intron (NM_001083587, intron 3 of 30)",81643,"NM_001083587",319939,"Mm.337820","NM_001083587","ENSMUSG00000020422","Tns3","BC023928|F830010I22Rik|TEM6|Tens1","tensin 3","protein-coding"]
[1333,"chr18",65606383,65607974,"+",0,"NA","intron (NM_207255, intron 2 of 5)","intron (NM_207255, intron 2 of 5)",12437,"NR_105742",100526497,null,"NR_105742","ENSMUSG00000077113","Mir466p","mmu-mir-466p","microRNA 466p","ncRNA"]
[2586,"chr9",45027856,45028355,"+",0,"NA","Intergenic","Intergenic",-14239,"NM_007962",14012,"Mm.33240","NM_007962","ENSMUSG00000032092","Mpzl2","Eva|Eva1","myelin protein zero-like 2","protein-coding"]
[434,"chr11",85274115,85275690,"+",0,"NA","Intergenic","B3|SINE|B2",-36352,"NM_016910",53892,"Mm.45609","NM_016910","ENSMUSG00000020525","Ppm1d","AV338790|Wip1","protein phosphatase 1D magnesium-dependent, delta isoform","protein-coding"]
[865,"chr14",70173091,70173696,"+",0,"NA","intron (NM_145978, intron 3 of 9)","intron (NM_145978, intron 3 of 9)",3422,"NM_001253736",213019,"Mm.283968","NM_145978","ENSMUSG00000022090","Pdlim2","4732462F18Rik|Slim","PDZ and LIM domain 2","protein-coding"]
[1184,"chr17",26505249,26505539,"+",0,"NA","TTS (NM_013642)","TTS (NM_013642)",3078,"NM_013642",19252,"Mm.239041","NM_013642","ENSMUSG00000024190","Dusp1","3CH134|MKP1|Ptpn16|U19515|erp|mkp-1","dual specificity phosphatase 1","protein-coding"]
[442,"chr11",88161247,88161373,"+",0,"NA","intron (NM_198013, intron 1 of 10)","intron (NM_198013, intron 1 of 10)",-8255,"NM_001172099",103841,"Mm.374846","NM_198013","ENSMUSG00000018378","Cuedc1","AI841487|C330016O16Rik","CUE domain containing 1","protein-coding"]
[2156,"chr6",54758034,54758334,"+",0,"NA","Intergenic","Intergenic",-58732,"NM_199143",387524,"Mm.286149","NM_199143",null,"Znrf2","1190002C14Rik|AU044205|D6Ertd365e","zinc and ring finger 2","protein-coding"]
[1577,"chr2",110757516,110757626,"+",0,"NA","intron (NM_001128103, intron 11 of 26)","intron (NM_001128103, intron 11 of 26)",36077,"NM_172979",269328,"Mm.32566","NM_172979","ENSMUSG00000050808","Muc15","4732460E09|D730046L02Rik|MUC-15","mucin 15","protein-coding"]
[1572,"chr2",103632602,103632865,"+",0,"NA","intron (NM_178890, intron 1 of 16)","intron (NM_178890, intron 1 of 16)",66423,"NM_178890",99382,"Mm.35850","NM_178890","ENSMUSG00000032724","Abtb2","AW539457|BPOZ-2","ankyrin repeat and BTB (POZ) domain containing 2","protein-coding"]
[689,"chr13",30166663,30167307,"+",0,"NA","intron (NM_153546, intron 1 of 12)","intron (NM_153546, intron 1 of 12)",30495,"NM_153546",218121,"Mm.89682","NM_153546","ENSMUSG00000038732","Mboat1","9130215M02Rik|BC023845|LPEAT1|Moact1|Oact1","membrane bound O-acyltransferase domain containing 1","protein-coding"]
[886,"chr14",99630694,99633435,"+",0,"NA","Intergenic","Intergenic",333373,"NM_009769",12224,"Mm.30262","NM_009769","ENSMUSG00000005148","Klf5","4930520J07Rik|Bteb2|CKLF|IKLF","Kruppel-like factor 5","protein-coding"]
[1116,"chr16",56871739,56873376,"+",0,"NA","intron (NM_019631, intron 1 of 5)","AT_rich|Low_complexity|Low_complexity",13606,"NM_019631",56277,"Mm.262328","NM_019631","ENSMUSG00000022754","Tmem45a","C630002M10Rik|M32486|p19.5","transmembrane protein 45a","protein-coding"]
[1329,"chr18",65036752,65037068,"+",0,"NA","intron (NM_031881, intron 1 of 29)","intron (NM_031881, intron 1 of 29)",13383,"NM_031881",83814,"Mm.98668","NM_031881","ENSMUSG00000024589","Nedd4l","1300012C07Rik|Nedd4-2|Nedd4b","neural precursor cell expressed, developmentally down-regulated gene 4-like","protein-coding"]
[1725,"chr3",89331815,89332008,"+",0,"NA","Intergenic","Intergenic",6117,"NM_007910",13639,"Mm.16332","NM_007910","ENSMUSG00000028040","Efna4","EFL-4|Epl4|LERK-4","ephrin A4","protein-coding"]
[2379,"chr7",129649460,129649614,"+",0,"NA","Intergenic","Intergenic",57674,"NM_172255",207425,"Mm.229323","NM_172255","ENSMUSG00000042055","Wdr11","2900055P10Rik|AW489876|Brwd2|mKIAA1351","WD repeat domain 11","protein-coding"]
[727,"chr13",43525321,43525977,"+",0,"NA","Intergenic","Intergenic",34542,"NM_001081059",76137,"Mm.426290","NM_001081059","ENSMUSG00000021371","Mcur1","6230416A05Rik|AU015498|AV136929|AW554392|C88263|Ccdc90a","mitochondrial calcium uniporter regulator 1","protein-coding"]
[320,"chr10",99204111,99204246,"+",0,"NA","Intergenic","Intergenic",-59053,"NM_026268",67603,"Mm.1791","NM_026268","ENSMUSG00000019960","Dusp6","1300019I03Rik|MKP-3|MKP3|PYST1","dual specificity phosphatase 6","protein-coding"]
[939,"chr15",37134768,37135873,"+",0,"NA","Intergenic","Intergenic",-97716,"NM_026496",252973,"Mm.244612","NM_026496","ENSMUSG00000022286","Grhl2","0610015A08Rik|BOM|Tcfcp2l3","grainyhead-like 2 (Drosophila)","protein-coding"]
[2619,"chr9",70249186,70249760,"+",0,"NA","intron (NM_181072, intron 1 of 27)","B3|SINE|B2",42123,"NM_181072",71602,"Mm.249311","NM_181072","ENSMUSG00000032220","Myo1e","2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3","myosin IE","protein-coding"]
[811,"chr13",112073970,112074372,"+",0,"NA","Intergenic","Intergenic",206235,"NR_130345",102636620,"Mm.402328","NR_130345","ENSMUSG00000086111","Gm15326","OTTMUSG00000020187","predicted gene 15326","ncRNA"]
[1670,"chr3",19429312,19429502,"+",0,"NA","Intergenic","Intergenic",-79188,"NM_001163536",66326,"Mm.45615","NM_025489","ENSMUSG00000027606","Dnajc5b","1700008A05Rik","DnaJ (Hsp40) homolog, subfamily C, member 5 beta","protein-coding"]
[2010,"chr5",43073687,43073978,"+",0,"NA","Intergenic","Intergenic",-159631,"NM_175937",231207,"Mm.7233","NM_175937","ENSMUSG00000039782","Cpeb2","A630055H10Rik|Cpe-bp2","cytoplasmic polyadenylation element binding protein 2","protein-coding"]
[465,"chr11",97659589,97660020,"+",0,"NA","Intergenic","Intergenic",-3608,"NM_139311",246198,"Mm.23685","NM_139311","ENSMUSG00000038437","Mllt6","AI315037|Af17","myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6","protein-coding"]
[249,"chr10",44001416,44001526,"+",0,"NA","intron (NM_172393, intron 1 of 19)","intron (NM_172393, intron 1 of 19)",3375,"NM_172393",11630,"Mm.292082","NM_172393","ENSMUSG00000019866","Aim1","AI462491|AI463325","absent in melanoma 1","protein-coding"]
[1612,"chr2",144441125,144441291,"+",0,"NA","Intergenic","Intergenic",-18072,"NR_033459",668917,"Mm.152805","NR_033459","ENSMUSG00000083674","Zfp133-ps","OTTMUSG00000003825|Zfp133","zinc finger protein 133, pseudogene","pseudo"]
[819,"chr14",9319570,9319825,"+",0,"NA","Intergenic","Intergenic",-564398,"NR_030680",100042415,"Mm.235938","NR_030680",null,"Mnd1-ps","Gm3833","Mnd1 retrotransposed pseudogene","pseudo"]
[1177,"chr17",24671851,24671992,"+",0,"NA","intron (NM_183149, intron 1 of 11)","B1_Mur4|SINE|Alu",2169,"NM_183149",213753,"Mm.219581","NM_183149","ENSMUSG00000041130","Zfp598","BC023040|Ntrap|Znf598","zinc finger protein 598","protein-coding"]
[1189,"chr17",27153072,27153187,"+",0,"NA","intron (NM_173027, intron 2 of 5)","intron (NM_173027, intron 2 of 5)",14635,"NM_173027",271424,"Mm.209679","NM_173027","ENSMUSG00000024210","Ip6k3","D830007E07Rik|Ihpk3","inositol hexaphosphate kinase 3","protein-coding"]
[1127,"chr16",78211251,78211799,"+",0,"NA","Intergenic","Intergenic",43929,"NR_045698",100503619,"Mm.387531","NR_045698",null,"E330011O21Rik","-","RIKEN cDNA E330011O21 gene","ncRNA"]
[1537,"chr2",72733345,72735007,"+",0,"NA","Intergenic","Intergenic",30666,"NR_040503",74541,"Mm.410774","NR_040503","ENSMUSG00000085252","8430437L04Rik","-","RIKEN cDNA 8430437L04 gene","ncRNA"]
[894,"chr14",103490854,103491290,"+",0,"NA","Intergenic","Intergenic",-22269,"NM_022886",64929,"Mm.244003","NM_022886","ENSMUSG00000022123","Scel","9230114I02Rik","sciellin","protein-coding"]
[1748,"chr3",95671021,95675837,"+",0,"NA","Intergenic","Intergenic",14488,"NM_144899",229595,"Mm.490574","NM_144899","ENSMUSG00000015850","Adamtsl4","ADAMTSL-4|Tsrc1","ADAMTS-like 4","protein-coding"]
[2127,"chr6",28227497,28228052,"+",0,"NA","Intergenic","Intergenic",33827,"NM_001081678",627049,"Mm.84441","NM_001081678","ENSMUSG00000039841","Zfp800","AA407452|Znf800","zinc finger protein 800","protein-coding"]
[858,"chr14",63968255,63968639,"+",0,"NA","Intergenic","Intergenic",19333,"NM_026359",67750,"Mm.33864","NM_026359","ENSMUSG00000021961","4930578I06Rik","AI429111","RIKEN cDNA 4930578I06 gene","protein-coding"]
[1298,"chr18",36534628,36535139,"+",0,"NA","intron (NM_001271547, intron 14 of 19)","intron (NM_001271547, intron 14 of 19)",6731,"NM_001271544",240215,"Mm.135463","NM_172830","ENSMUSG00000024485","Slc4a9","AE4|D630003B07|D630024F24Rik","solute carrier family 4, sodium bicarbonate cotransporter, member 9","protein-coding"]
[140,"chr1",135926974,135927084,"+",0,"NA","Intergenic","Intergenic",-7822,"NM_019645",18772,"Mm.4494","NM_019645","ENSMUSG00000026413","Pkp1","-","plakophilin 1","protein-coding"]
[2222,"chr6",125255958,125256325,"+",0,"NA","Intergenic","Intergenic",-9384,"NR_015527",73870,"Mm.440681","NR_015527","ENSMUSG00000108129","4930417O13Rik","-","RIKEN cDNA 4930417O13 gene","ncRNA"]
[1900,"chr4",116788395,116789055,"+",0,"NA","intron (NM_146151, intron 4 of 10)","intron (NM_146151, intron 4 of 10)",18834,"NM_026654",68276,"Mm.30534","NM_026654","ENSMUSG00000028688","Toe1","4930584N22Rik|4933424D16Rik|AI413517","target of EGR1, member 1 (nuclear)","protein-coding"]
[385,"chr11",55335457,55335680,"+",0,"NA","Intergenic","Intergenic",-23311,"NM_001029988",245827,"Mm.339363","NM_001029988","ENSMUSG00000055333","Fat2","EMI2|Fath2|Gm523|mKIAA0811","FAT tumor suppressor homolog 2 (Drosophila)","protein-coding"]
[954,"chr15",59409330,59410172,"+",0,"NA","intron (NM_026746, intron 2 of 6)","intron (NM_026746, intron 2 of 6)",35553,"NM_001164604",68501,"Mm.27762","NM_026746","ENSMUSG00000059586","Nsmce2","1110014D18Rik|AI661537","non-SMC element 2 homolog (MMS21, S. cerevisiae)","protein-coding"]
[1359,"chr19",5554609,5554872,"+",0,"NA","intron (NM_019935, intron 1 of 3)","intron (NM_019935, intron 1 of 3)",5835,"NM_019935",18426,"Mm.280225","NM_019935","ENSMUSG00000024922","Ovol1","BB147136|Ovo1|movo1","OVO homolog-like 1 (Drosophila)","protein-coding"]
[1479,"chr2",29771351,29771493,"+",0,"NA","Intergenic","B4A|SINE|B4",9894,"NM_001177392",433416,"Mm.330112","NM_001034887","ENSMUSG00000075425","Gm13547","OTTMUSG00000012686","predicted gene 13547","protein-coding"]
[2578,"chr9",43746929,43747039,"+",0,"NA","intron (NM_021424, intron 1 of 5)","intron (NM_021424, intron 1 of 5)",2408,"NM_021424",58235,"Mm.335096","NM_021424","ENSMUSG00000032012","Pvrl1","AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|nectin-1","poliovirus receptor-related 1","protein-coding"]
[801,"chr13",103977595,103978690,"+",0,"NA","Intergenic","Intergenic",-57556,"NM_001005868",59079,"Mm.277354","NM_021563","ENSMUSG00000021709","Erbb2ip","1700028E05Rik|Erbin|mKIAA1225","Erbb2 interacting protein","protein-coding"]
[985,"chr15",80005701,80005811,"+",0,"NA","intron (NM_011057, intron 1 of 6)","intron (NM_011057, intron 1 of 6)",-6730,"NR_106072",102465699,null,"NR_106072","ENSMUSG00000099222","Mir7213","Gm27377|mmu-mir-7213","microRNA 7213","ncRNA"]
[971,"chr15",62075736,62077476,"+",0,"NA","intron (NR_132746, intron 1 of 6)","intron (NR_132746, intron 1 of 6)",37349,"NR_132746",19296,"Mm.4608","NM_011222","ENSMUSG00000097039","Pvt1","Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1","plasmacytoma variant translocation 1","ncRNA"]
[754,"chr13",62926876,62928116,"+",0,"NA","Intergenic","MER5A|DNA|hAT-Charlie",-37397,"NM_001289926",72061,"Mm.188105","NM_028079","ENSMUSG00000021458","2010111I01Rik","2300006M17Rik|AP-O|Aopep|mir-23b|mir-24-1|mir-27b","RIKEN cDNA 2010111I01 gene","protein-coding"]
[479,"chr11",99110485,99110944,"+",0,"NA","Intergenic","Intergenic",-21408,"NM_172564",217169,"Mm.262067","NM_172564","ENSMUSG00000017607","Tns4","9930017A07Rik|AA589547|AU016405|Cten","tensin 4","protein-coding"]
[847,"chr14",54227858,54227978,"+",0,"NA","Intergenic","Intergenic",26011,"NM_001113358",13135,"Mm.319038","NM_010015","ENSMUSG00000022174","Dad1","AI323713","defender against cell death 1","protein-coding"]
[1166,"chr17",13855129,13857911,"+",0,"NA","intron (NM_010806, intron 20 of 32)","intron (NM_010806, intron 20 of 32)",-91853,"NM_001122977",635895,"Mm.388844","NM_001122977","ENSMUSG00000067941","Gm7168","EG635895","predicted gene 7168","protein-coding"]
[2166,"chr6",67452989,67455118,"+",0,"NA","intron (NM_144548, intron 6 of 10)","intron (NM_144548, intron 6 of 10)",37802,"NM_144548",209590,"Mm.221227","NM_144548","ENSMUSG00000049093","Il23r","IL-23R","interleukin 23 receptor","protein-coding"]
[1563,"chr2",102763520,102763805,"+",0,"NA","intron (NM_011393, intron 8 of 9)","MIRb|SINE|MIR",57224,"NM_001077515",20511,"Mm.267547","NM_011393","ENSMUSG00000005089","Slc1a2","1700091C19Rik|2900019G14Rik|AI159670|Eaat2|GLT-1|GLT1|MGLT1","solute carrier family 1 (glial high affinity glutamate transporter), member 2","protein-coding"]
[1003,"chr15",95828118,95828278,"+",0,"NA","intron (NM_175344, intron 1 of 19)","intron (NM_175344, intron 1 of 19)",37355,"NM_001253813",105722,"Mm.38087","NM_175344","ENSMUSG00000064210","Ano6","2900059G15Rik|AA407480|AW554778|F730003B03Rik|Tmem16f","anoctamin 6","protein-coding"]
[1378,"chr19",15940711,15941492,"+",0,"NA","Intergenic","Intergenic",-16042,"NM_177420",107272,"Mm.289936","NM_177420","ENSMUSG00000024640","Psat1","D8Ertd814e|EPIP|PSA|Psat","phosphoserine aminotransferase 1","protein-coding"]
[1054,"chr16",21163057,21163170,"+",0,"NA","Intergenic","B1F|SINE|Alu",-9169,"NM_025634",66561,"Mm.422867","NM_025634","ENSMUSG00000090356","Teddm3","2310042E22Rik","transmembrane epididymal family member 3","protein-coding"]
[1800,"chr3",135728908,135730306,"+",0,"NA","Intergenic","CT-rich|Low_complexity|Low_complexity",-38060,"NM_008689",18033,"Mm.256765","NM_008689","ENSMUSG00000028163","Nfkb1","NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105","nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105","protein-coding"]
[2101,"chr5",142431635,142431959,"+",0,"NA","intron (NM_199068, intron 1 of 8)","intron (NM_199068, intron 1 of 8)",30300,"NM_199068",17425,"Mm.24214","NM_010812","ENSMUSG00000056493","Foxk1","A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf","forkhead box K1","protein-coding"]
[619,"chr12",79507752,79508352,"+",0,"NA","3' UTR (NM_001252562, exon 8 of 8)","3' UTR (NM_001252562, exon 8 of 8)",210701,"NM_001252562",19363,"Mm.341756","NM_009014","ENSMUSG00000059060","Rad51b","AI553500|R51H2|Rad51l1|mREC2","RAD51 homolog B","protein-coding"]
[1717,"chr3",87911582,87912263,"+",0,"NA","intron (NM_008231, intron 1 of 5)","B1_Mur2|SINE|Alu",5601,"NM_008231",15191,"Mm.292208","NM_008231","ENSMUSG00000004897","Hdgf","AI118077|D3Ertd299e","hepatoma-derived growth factor","protein-coding"]
[2557,"chr9",31856016,31856293,"+",0,"NA","intron (NM_013800, intron 2 of 3)","intron (NM_013800, intron 2 of 3)",57131,"NM_013800",12023,"Mm.261044","NM_013800","ENSMUSG00000032033","Barx2","2310006E12Rik|Barx2b","BarH-like homeobox 2","protein-coding"]
[698,"chr13",37452855,37453157,"+",0,"NA","Intergenic","Intergenic",107661,"NM_010745",17084,"Mm.2639","NM_010745","ENSMUSG00000021423","Ly86","MD-1|MD1","lymphocyte antigen 86","protein-coding"]
[1634,"chr2",160513137,160513455,"+",0,"NA","Intergenic","Intergenic",-132601,"NM_009408",21969,"Mm.217233","NM_009408","ENSMUSG00000070544","Top1","AI467334|D130064I21Rik|Top-1","topoisomerase (DNA) I","protein-coding"]
[621,"chr12",79548991,79549125,"+",0,"NA","intron (NM_009014, intron 7 of 10)","MTD|LTR|ERVL-MaLR",251707,"NM_001252562",19363,"Mm.341756","NM_009014","ENSMUSG00000059060","Rad51b","AI553500|R51H2|Rad51l1|mREC2","RAD51 homolog B","protein-coding"]
[524,"chr11",117218001,117218542,"+",0,"NA","intron (NM_001113486, intron 1 of 11)","intron (NM_001113486, intron 1 of 11)",18610,"NM_001113486",53860,"Mm.38450","NM_017380","ENSMUSG00000059248","2009-09-01","MSF1|Msf|PNUTL4|Sint1","septin 9","protein-coding"]
[2176,"chr6",91201428,91201883,"+",0,"NA","Intergenic","L2b|LINE|L2",-11109,"NM_001081437",14115,"Mm.249146","NM_007992","ENSMUSG00000064080","Fbln2","5730577E14Rik|FIBL-2","fibulin 2","protein-coding"]
[1848,"chr4",53446447,53446614,"+",0,"NA","intron (NM_001159633, intron 1 of 12)","intron (NM_001159633, intron 1 of 12)",6117,"NM_133891",100434,"Mm.482207","NM_133891","ENSMUSG00000028412","Slc44a1","2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92","solute carrier family 44, member 1","protein-coding"]
[2714,"chr9",120592023,120593881,"+",0,"NA","Intergenic","Intergenic",15621,"NR_073359",76100,"Mm.48212","NR_073359","ENSMUSG00000052658","5830454E08Rik","-","RIKEN cDNA 5830454E08 gene","ncRNA"]
[2310,"chr7",68021139,68022695,"+",0,"NA","intron (NM_010513, intron 2 of 20)","intron (NM_010513, intron 2 of 20)",69660,"NM_010513",16001,"Mm.275742","NM_010513",null,"Igf1r","A330103N21Rik|CD221|D930020L01|IGF-1R|hyft","insulin-like growth factor I receptor","protein-coding"]
[2495,"chr8",106526726,106526990,"+",0,"NA","intron (NM_007665, intron 2 of 15)","intron (NM_007665, intron 2 of 15)",16006,"NM_001037809",12560,"Mm.4658","NM_007665","ENSMUSG00000061048","Cdh3","AI385538|Cadp|Cdhp|P-cadherin|Pcad","cadherin 3","protein-coding"]
[598,"chr12",73616396,73618270,"+",0,"NA","intron (NM_001313977, intron 2 of 14)","intron (NM_001313977, intron 2 of 14)",32537,"NM_008856",18755,"Mm.341677","NM_008856","ENSMUSG00000021108","Prkch","Pkch","protein kinase C, eta","protein-coding"]
[2486,"chr8",95149013,95149498,"+",0,"NA","Intergenic","Intergenic",-6715,"NM_001145831",16582,"Mm.378951","NM_010631","ENSMUSG00000031788","Kifc3","AI325457|BB123200","kinesin family member C3","protein-coding"]
[2322,"chr7",75398031,75398229,"+",0,"NA","Intergenic","PB1D7|SINE|Alu",-57404,"NM_029332",75547,"Mm.216107","NM_029332","ENSMUSG00000066406","Akap13","1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC","A kinase (PRKA) anchor protein 13","protein-coding"]
[780,"chr13",81308134,81309489,"+",0,"NA","intron (NM_054053, intron 83 of 89)","intron (NM_054053, intron 83 of 89)",324333,"NM_054053",110789,"Mm.288694","NM_054053","ENSMUSG00000069170","Adgrv1","Frings|Gpr98|Mass1|Mgr1|VLGR1","adhesion G protein-coupled receptor V1","protein-coding"]
[2438,"chr8",46868199,46870283,"+",0,"NA","Intergenic","Intergenic",-117684,"NM_177304",320981,"Mm.211429","NM_177304","ENSMUSG00000038173","Enpp6","4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|Npp6","ectonucleotide pyrophosphatase/phosphodiesterase 6","protein-coding"]
[2317,"chr7",73585214,73589221,"+",0,"NA","Intergenic","Intergenic",-28822,"NR_037569",69170,"Mm.34539","NR_037569","ENSMUSG00000098496","1810026B05Rik","-","RIKEN cDNA 1810026B05 gene","ncRNA"]
[240,"chr10",24276811,24276960,"+",0,"NA","intron (NM_021509, intron 4 of 11)","intron (NM_021509, intron 4 of 11)",53368,"NM_021509",59012,"Mm.285934","NM_021509","ENSMUSG00000020000","Moxd1","3230402N08Rik|MNCb-5203","monooxygenase, DBH-like 1","protein-coding"]
[1433,"chr19",56981454,56982308,"+",0,"NA","intron (NM_146102, intron 1 of 20)","intron (NM_146102, intron 1 of 20)",26694,"NM_146102",226250,"Mm.226284","NM_146102","ENSMUSG00000025083","Afap1l2","AU041783|C86904|mKIAA1914","actin filament associated protein 1-like 2","protein-coding"]
[1666,"chr2",173662873,173663703,"+",0,"NA","intron (NM_024436, intron 2 of 6)","ORR1A1|LTR|ERVL-MaLR",3443,"NM_024436",19334,"Mm.275304","NM_024436",null,"Rab22a","3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22","RAB22A, member RAS oncogene family","protein-coding"]
[2209,"chr6",120115016,120115144,"+",0,"NA","intron (NM_016718, intron 1 of 3)","intron (NM_016718, intron 1 of 3)",21700,"NM_016718",29862,"Mm.103668","NM_016718","ENSMUSG00000041377","Ninj2","-","ninjurin 2","protein-coding"]
[230,"chr10",18849477,18851978,"+",0,"NA","intron (NM_022032, intron 1 of 2)","intron (NM_022032, intron 1 of 2)",5656,"NM_022032",64058,"Mm.28209","NM_022032","ENSMUSG00000019851","Perp","1110017A08Rik|KCP1|KRTCAP1|PIGPC1|THW","PERP, TP53 apoptosis effector","protein-coding"]
[115,"chr1",132010610,132011478,"+",0,"NA","intron (NM_007923, intron 1 of 4)","L1MB8|LINE|L1",3439,"NM_007923",13714,"Mm.254233","NM_007923","ENSMUSG00000026436","Elk4","2310011G17Rik|A130026I01Rik|BB162516|SAP-1|Sap1","ELK4, member of ETS oncogene family","protein-coding"]
[377,"chr11",50213330,50213440,"+",0,"NA","Intergenic","Intergenic",-2565,"NM_011018",18412,"Mm.40828","NM_011018","ENSMUSG00000015837","Sqstm1","A170|OSF-6|Osi|STAP|STONE14|p62","sequestosome 1","protein-coding"]
[2374,"chr7",127701252,127701783,"+",0,"NA","Intergenic","MERVL_2A-int|LTR|ERVL",-6970,"NR_030428",791073,null,"NR_030428","ENSMUSG00000076454","Mir762","Mirn762|mir-762|mmu-mir-762","microRNA 762","ncRNA"]
[2050,"chr5",101741548,101742292,"+",0,"NA","Intergenic","Intergenic",-23210,"NM_173370",74596,"Mm.46764","NM_173370","ENSMUSG00000029330","Cds1","4833409J18Rik|AI314024|AW125888","CDP-diacylglycerol synthase 1","protein-coding"]
[602,"chr12",75679798,75681139,"+",0,"NA","Intergenic","RLTR12BD_Mm|LTR|ERVK",-10931,"NM_028203",72338,"Mm.341719","NM_028203","ENSMUSG00000045690","Wdr89","2600001A11Rik","WD repeat domain 89","protein-coding"]
[922,"chr15",12481123,12481588,"+",0,"NA","intron (NM_001081064, intron 1 of 23)","intron (NM_001081064, intron 1 of 23)",111201,"NM_001081064",68070,"Mm.423205","NM_001081064","ENSMUSG00000022197","Pdzd2","4930537L06Rik|A930022H17Rik|Gm82|Pdzk3|mKIAA0300","PDZ domain containing 2","protein-coding"]
[2319,"chr7",74611618,74614976,"+",0,"NA","Intergenic","Intergenic",-58517,"NM_001038643",108116,"Mm.425467","NM_023908","ENSMUSG00000025790","Slco3a1","5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11","solute carrier organic anion transporter family, member 3a1","protein-coding"]
[1311,"chr18",50022513,50025163,"+",0,"NA","intron (NM_001177759, intron 1 of 1)","intron (NM_001177759, intron 1 of 1)",-29444,"NM_134131",106869,"Mm.27740","NM_134131","ENSMUSG00000062210","Tnfaip8","AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2","tumor necrosis factor, alpha-induced protein 8","protein-coding"]
[2628,"chr9",70300537,70302794,"+",0,"NA","intron (NM_181072, intron 3 of 27)","intron (NM_181072, intron 3 of 27)",94315,"NM_181072",71602,"Mm.249311","NM_181072","ENSMUSG00000032220","Myo1e","2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3","myosin IE","protein-coding"]
[1072,"chr16",25585120,25585327,"+",0,"NA","Intergenic","Intergenic",-98542,"NM_001127259",22061,"Mm.20894","NM_011641","ENSMUSG00000022510","Trp63","AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1","transformation related protein 63","protein-coding"]
[2470,"chr8",88648960,88650104,"+",0,"NA","intron (NM_145857, intron 1 of 12)","intron (NM_145857, intron 1 of 12)",2185,"NM_145857",257632,"Mm.222633","NM_145857","ENSMUSG00000055994","Nod2","ACUG|BLAU|CD|Card15|F830032C23Rik|IBD1|Nlrc2","nucleotide-binding oligomerization domain containing 2","protein-coding"]
[1787,"chr3",121834499,121834655,"+",0,"NA","Intergenic","LTR33|LTR|ERVL",-19362,"NM_008991",19299,"Mm.399042","NM_008991","ENSMUSG00000028127","Abcd3","AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1","ATP-binding cassette, sub-family D (ALD), member 3","protein-coding"]
[1394,"chr19",32068063,32070909,"+",0,"NA","intron (NM_018830, intron 2 of 23)","B3|SINE|B2",33654,"NM_018830",54447,"Mm.491229","NM_018830","ENSMUSG00000024887","Asah2","AI585898","N-acylsphingosine amidohydrolase 2","protein-coding"]
[612,"chr12",77084764,77085155,"+",0,"NA","Intergenic","RLTR17B_Mm|LTR|ERVK",-122711,"NM_001146176",17187,"Mm.268548","NM_008558","ENSMUSG00000059436","Max","AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8","Max protein","protein-coding"]
[936,"chr15",36928079,36928266,"+",0,"NA","Intergenic","MLT1C|LTR|ERVL-MaLR",79230,"NM_026521",68036,"Mm.371631","NM_026521","ENSMUSG00000062397","Zfp706","3110006P09Rik|AA793007|AW536850|C77232|Znf706","zinc finger protein 706","protein-coding"]
[1391,"chr19",25357559,25357671,"+",0,"NA","intron (NM_181404, intron 3 of 13)","B1_Mus2|SINE|Alu",120413,"NM_181404",107351,"Mm.260722","NM_181404","ENSMUSG00000032702","Kank1","A930031B09Rik|AU015049|AW121052|Ankrd15|D330024H06Rik|mKIAA0172","KN motif and ankyrin repeat domains 1","protein-coding"]
[2251,"chr6",145968784,145968924,"+",0,"NA","Intergenic","Intergenic",34707,"NM_010656",16651,"Mm.49689","NM_010656","ENSMUSG00000030255","Sspn","Krag","sarcospan","protein-coding"]
[1277,"chr18",12503574,12503752,"+",0,"NA","intron (NM_010680, intron 38 of 74)","intron (NM_010680, intron 38 of 74)",-139870,"NM_028341",72747,"Mm.52526","NM_028341","ENSMUSG00000024424","Ttc39c","1700008N02Rik|2810439F02Rik","tetratricopeptide repeat domain 39C","protein-coding"]
[1086,"chr16",26439807,26439978,"+",0,"NA","Intergenic","Intergenic",-23243,"NM_053241",114141,"Mm.275205","NM_053241","ENSMUSG00000038148","Cldn16","PCLN1|claudin-16","claudin 16","protein-coding"]
[701,"chr13",37591982,37592173,"+",0,"NA","Intergenic","Intergenic",-233961,"NM_026830",68750,"Mm.491109","NM_026830","ENSMUSG00000039087","Rreb1","1110037N09Rik|AA414966|B930013M22Rik","ras responsive element binding protein 1","protein-coding"]
[214,"chr1",194676333,194676818,"+",0,"NA","intron (NM_008882, intron 3 of 31)","L1MA4A|LINE|L1",56746,"NM_008882",18845,"Mm.2251","NM_008882","ENSMUSG00000026640","Plxna2","2810428A13Rik|AA589422|AW457381|OCT|PlexA2|Plxn2|mKIAA0463","plexin A2","protein-coding"]
[564,"chr12",52819009,52819679,"+",0,"NA","intron (NM_198111, intron 2 of 13)","intron (NM_198111, intron 2 of 13)",119961,"NM_198111",238161,"Mm.310822","NM_198111","ENSMUSG00000061603","Akap6","AI482140|Akapalpha|Akapbeta|PRKA","A kinase (PRKA) anchor protein 6","protein-coding"]
[2708,"chr9",116223332,116224091,"+",0,"NA","Intergenic","L4_A_Mam|LINE|RTE-X",-48348,"NM_009371",21813,"Mm.172346","NM_009371","ENSMUSG00000032440","Tgfbr2","1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII","transforming growth factor, beta receptor II","protein-coding"]
[2562,"chr9",42110054,42110232,"+",0,"NA","intron (NM_011436, intron 1 of 47)","intron (NM_011436, intron 1 of 47)",14146,"NM_011436",20660,"Mm.121920","NM_011436",null,"Sorl1","2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA","sortilin-related receptor, LDLR class A repeats-containing","protein-coding"]
[1650,"chr2",167830924,167831142,"+",0,"NA","Intergenic","Intergenic",-101294,"NM_011201",19246,"Mm.277916","NM_011201","ENSMUSG00000027540","Ptpn1","PTP-1B|PTP-HA2|PTP1B","protein tyrosine phosphatase, non-receptor type 1","protein-coding"]
[2074,"chr5",121393114,121395366,"+",0,"NA","Intergenic","B1_Mus2|SINE|Alu",-3742,"NM_172722",231713,"Mm.33919","NM_172722","ENSMUSG00000042719","Naa25","4833422K13Rik|A630046C11|AI450868|C330023M02Rik|Mdm20","N(alpha)-acetyltransferase 25, NatB auxiliary subunit","protein-coding"]
[2539,"chr9",4375862,4375972,"+",0,"NA","Intergenic","Intergenic",-7620,"NM_145609",78100,"Mm.206549","NM_145609","ENSMUSG00000041124","Msantd4","8430410K20Rik|Mysantd4","Myb/SANT-like DNA-binding domain containing 4 with coiled-coils","protein-coding"]
[2547,"chr9",20943666,20944665,"+",0,"NA","intron (NM_001199432, intron 1 of 38)","intron (NM_001199432, intron 1 of 38)",8458,"NM_001199433",13433,"Mm.128580","NM_010066","ENSMUSG00000004099","Dnmt1","Cxxc9|Dnmt|Dnmt1o|MCMT|MTase|Met-1|Met1|MommeD2|m.MmuI","DNA methyltransferase (cytosine-5) 1","protein-coding"]
[731,"chr13",45917210,45917340,"+",0,"NA","intron (NM_009124, intron 2 of 7)","intron (NM_009124, intron 2 of 7)",47716,"NM_001199304",20238,"Mm.342683","NM_009124","ENSMUSG00000046876","Atxn1","2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1","ataxin 1","protein-coding"]
[1967,"chr4",148899793,148900414,"+",0,"NA","intron (NM_001159344, intron 3 of 20)","intron (NM_001159344, intron 3 of 20)",95711,"NM_027195",69743,"Mm.233879","NM_027195","ENSMUSG00000028977","Casz1","2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e","castor zinc finger 1","protein-coding"]
[657,"chr12",107011871,107012166,"+",0,"NA","Intergenic","Intergenic",-295694,"NR_015512",71033,"Mm.159404","NR_015512","ENSMUSG00000085820","4933406K04Rik","4930426M03Rik|4930485I22Rik|4933427G14Rik","RIKEN cDNA 4933406K04 gene","ncRNA"]
[2139,"chr6",38345681,38345871,"+",0,"NA","intron (NM_028864, intron 1 of 8)","intron (NM_028864, intron 1 of 8)",8827,"NM_028864",78781,"Mm.25243","NM_028421","ENSMUSG00000029826","Zc3hav1","1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP","zinc finger CCCH type, antiviral 1","protein-coding"]
[1865,"chr4",57338076,57339004,"+",0,"NA","Intergenic","Intergenic",25752,"NR_038179",73349,"Mm.393774","NR_038178",null,"1700042G15Rik","-","RIKEN cDNA 1700042G15 gene","ncRNA"]
[1783,"chr3",117043961,117046261,"+",0,"NA","Intergenic","Intergenic",32654,"NR_038029",433646,"Mm.158997","NR_038029","ENSMUSG00000028009","1700061I17Rik","-","RIKEN cDNA 1700061I17 gene","ncRNA"]
[768,"chr13",72198096,72198215,"+",0,"NA","Intergenic","Intergenic",-234432,"NM_010573",16371,"Mm.316056","NM_010573","ENSMUSG00000060969","Irx1","-","Iroquois related homeobox 1 (Drosophila)","protein-coding"]
[1928,"chr4",130629549,130629772,"+",0,"NA","Intergenic","B1F2|SINE|Alu",-33699,"NM_030722",80912,"Mm.440206","NM_030722","ENSMUSG00000028580","Pum1","AA517475|Pumm|mKIAA0099","pumilio RNA-binding family member 1","protein-coding"]
[1092,"chr16",30024469,30024665,"+",0,"NA","intron (NR_045878, intron 3 of 3)","intron (NR_045878, intron 3 of 3)",14912,"NR_045878",71528,"Mm.297640","NR_045878",null,"9030404E10Rik","-","RIKEN cDNA 9030404E10 gene","ncRNA"]
[503,"chr11",106648778,106649854,"+",0,"NA","Intergenic","Intergenic",-36386,"NM_198292",21763,"Mm.102407","NM_198292","ENSMUSG00000040548","Tex2","4930568E07Rik|AI553404|Def-5|Taz4","testis expressed gene 2","protein-coding"]
[2255,"chr7",15983545,15983995,"+",0,"NA","intron (NM_001081418, intron 6 of 13)","B1_Mur3|SINE|Alu",15725,"NM_001081418",243842,"Mm.440249","NM_001081418","ENSMUSG00000070808","Gltscr1","-","glioma tumor suppressor candidate region gene 1","protein-coding"]
[1756,"chr3",98080209,98080621,"+",0,"NA","intron (NM_010928, intron 4 of 33)","intron (NM_010928, intron 4 of 33)",66877,"NM_010928",18129,"Mm.485843","NM_010928","ENSMUSG00000027878","Notch2","AI853703|N2","notch 2","protein-coding"]
[1636,"chr2",160621410,160621832,"+",0,"NA","Intergenic","Intergenic",-24276,"NM_009408",21969,"Mm.217233","NM_009408","ENSMUSG00000070544","Top1","AI467334|D130064I21Rik|Top-1","topoisomerase (DNA) I","protein-coding"]
[2491,"chr8",105793421,105793972,"+",0,"NA","intron (NM_145824, intron 3 of 13)","intron (NM_145824, intron 3 of 13)",33654,"NM_145824",74334,"Mm.4206","NM_145824","ENSMUSG00000037415","Ranbp10","4432417N03Rik","RAN binding protein 10","protein-coding"]
[1483,"chr2",31042662,31043454,"+",0,"NA","intron (NM_001177649, intron 9 of 14)","intron (NM_001177649, intron 9 of 14)",53442,"NM_001177650",14269,"Mm.52297","NM_019406","ENSMUSG00000075415","Fnbp1","1110057E06Rik|2210010H06Rik|FBP1|Fbp17","formin binding protein 1","protein-coding"]
[338,"chr10",127904569,127905964,"+",0,"NA","intron (NM_027301, intron 3 of 3)","intron (NM_027301, intron 3 of 3)",6731,"NM_027301",70061,"Mm.158320","NM_027301","ENSMUSG00000040127","Sdr9c7","1810054F20Rik|Rdh20|Rdhs|SDR-O|Sdro","4short chain dehydrogenase/reductase family 9C, member 7","protein-coding"]
[576,"chr12",69468063,69468521,"+",0,"NA","non-coding (NR_038061, exon 4 of 5)","non-coding (NR_038061, exon 4 of 5)",7258,"NR_038060",76062,"Mm.380755","NR_038060",null,"5830428M24Rik","100040862|Gm3007","RIKEN cDNA 5830428M24 gene","ncRNA"]
[761,"chr13",63117712,63118829,"+",0,"NA","intron (NM_001289924, intron 5 of 16)","intron (NM_001289924, intron 5 of 16)",-121759,"NR_110520",72061,"Mm.188105","NM_028079","ENSMUSG00000021458","2010111I01Rik","2300006M17Rik|AP-O|Aopep|mir-23b|mir-24-1|mir-27b","RIKEN cDNA 2010111I01 gene","protein-coding"]
[1996,"chr5",30850539,30851274,"+",0,"NA","intron (NM_133350, intron 1 of 6)","GA-rich|Low_complexity|Low_complexity",-10901,"NM_001310516",100732,"Mm.332295","NM_133350","ENSMUSG00000029166","Mapre3","AI790651|EB2|EB3|EBF3|RP3","microtubule-associated protein, RP/EB family, member 3","protein-coding"]
[738,"chr13",49342978,49344462,"+",0,"NA","intron (NM_001039179, intron 1 of 6)","intron (NM_001039179, intron 1 of 6)",2171,"NM_001039180",76895,"Mm.197387","NM_029791","ENSMUSG00000037933","Bicd2","-","bicaudal D homolog 2 (Drosophila)","protein-coding"]
[1775,"chr3",108458432,108458955,"+",0,"NA","intron (NM_001033304, intron 20 of 20)","intron (NM_001033304, intron 20 of 20)",-13434,"NM_001204979",20226,"Mm.28688","NM_011319","ENSMUSG00000068739","Sars","Sars1|Strs|serRS","seryl-aminoacyl-tRNA synthetase","protein-coding"]
[1415,"chr19",43710181,43710412,"+",0,"NA","intron (NM_053103, intron 5 of 12)","Lx9|LINE|L1",20607,"NM_053103",93685,"Mm.248237","NM_053103","ENSMUSG00000025192","Entpd7","1810012B13Rik|1810020C02Rik|2810003F23Rik|LALP1|Lysal2","ectonucleoside triphosphate diphosphohydrolase 7","protein-coding"]
[484,"chr11",100282905,100283242,"+",0,"NA","Intergenic","B3A|SINE|B2",-13202,"NM_212483",68239,"Mm.158190","NM_212483","ENSMUSG00000053654","Krt42","2410039E07Rik|K17n|Ka22|ecat6","keratin 42","protein-coding"]
[2334,"chr7",80823672,80825193,"+",0,"NA","Intergenic","Intergenic",-21101,"NM_016721",29875,"Mm.207619","NM_016721","ENSMUSG00000030536","Iqgap1","AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051","IQ motif containing GTPase activating protein 1","protein-coding"]
[1036,"chr16",4473197,4473943,"+",0,"NA","Intergenic","B1_Mur2|SINE|Alu",49483,"NM_175347",106393,"Mm.35811","NM_175347","ENSMUSG00000022519","Srl","9830004M20Rik|AW108387|sar","sarcalumenin","protein-coding"]
[1078,"chr16",25947583,25949082,"+",0,"NA","Intergenic","Intergenic",146416,"NM_001127264",22061,"Mm.20894","NM_011641","ENSMUSG00000022510","Trp63","AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1","transformation related protein 63","protein-coding"]
[1243,"chr17",78732146,78732632,"+",0,"NA","intron (NM_011500, intron 1 of 17)","intron (NM_011500, intron 1 of 17)",4171,"NM_011500",268980,"Mm.311915","NM_011500","ENSMUSG00000024077","Strn","AU022939|D130055P19","striatin, calmodulin binding protein","protein-coding"]
[2530,"chr8",126539257,126540842,"+",0,"NA","Intergenic","Intergenic",53387,"NM_001164598",270110,"Mm.334918","NM_001164598","ENSMUSG00000051495","Irf2bp2","E130305N23Rik|IRF-2BP2","interferon regulatory factor 2 binding protein 2","protein-coding"]
[2065,"chr5",115492433,115492551,"+",0,"NA","Intergenic","Intergenic",-8008,"NM_133760",75387,"Mm.332616","NM_133760","ENSMUSG00000029524","Sirt4","4930596O17Rik","sirtuin 4","protein-coding"]
[1265,"chr17",88257565,88257803,"+",0,"NA","Intergenic","Intergenic",132172,"NM_001190356",225058,"Mm.312053","NM_001190356",null,"Gm4832","EG225058","predicted gene 4832","protein-coding"]
[544,"chr12",14300884,14301569,"+",0,"NA","Intergenic","Intergenic",39692,"NR_045003",791361,"Mm.217963","NR_045003",null,"Gm16497","ENSMUSG00000066623","predicted gene 16497","ncRNA"]
[623,"chr12",79598206,79601078,"+",0,"NA","intron (NM_009014, intron 7 of 10)","intron (NM_009014, intron 7 of 10)",302291,"NM_001252562",19363,"Mm.341756","NM_009014","ENSMUSG00000059060","Rad51b","AI553500|R51H2|Rad51l1|mREC2","RAD51 homolog B","protein-coding"]
[1512,"chr2",48082928,48083423,"+",0,"NA","Intergenic","Intergenic",-730934,"NM_007396",11480,"Mm.314338","NM_007396","ENSMUSG00000052155","Acvr2a","ActrIIa|Acvr2|TactrII","activin receptor IIA","protein-coding"]
[1196,"chr17",31745526,31748179,"+",0,"NA","Intergenic","Intergenic",68921,"NM_001278570",12954,"Mm.1228","NM_013501","ENSMUSG00000024041","Cryaa","Acry-1|Crya-1|Crya1|DAcry-1|lop18","crystallin, alpha A","protein-coding"]
[1114,"chr16",56857830,56858499,"+",0,"NA","intron (NM_019631, intron 1 of 5)","intron (NM_019631, intron 1 of 5)",27999,"NM_019631",56277,"Mm.262328","NM_019631","ENSMUSG00000022754","Tmem45a","C630002M10Rik|M32486|p19.5","transmembrane protein 45a","protein-coding"]
[2389,"chr7",132767864,132769480,"+",0,"NA","intron (NM_175268, intron 3 of 4)","intron (NM_175268, intron 3 of 4)",18263,"NM_175268",77938,"Mm.225649","NM_175268","ENSMUSG00000030956","Fam53b","A930008G19Rik|mKIAA0140","family with sequence similarity 53, member B","protein-coding"]
[2564,"chr9",42195752,42196605,"+",0,"NA","intron (NR_040754, intron 3 of 6)","intron (NR_040754, intron 3 of 6)",13053,"NR_040754",78194,"Mm.251457","NR_040754",null,"4930546K05Rik","-","RIKEN cDNA 4930546K05 gene","ncRNA"]
[2382,"chr7",129965787,129965948,"+",0,"NA","intron (NR_046077, intron 1 of 3)","B4A|SINE|B4",3702,"NR_046077",100043150,"Mm.334264","NR_046077",null,"Gm4265","-","predicted gene 4265","ncRNA"]
[328,"chr10",116693483,116694414,"+",0,"NA","Intergenic","Intergenic",35229,"NR_045345",72286,"Mm.396207","NR_045345","ENSMUSG00000100198","1700030O20Rik","-","RIKEN cDNA 1700030O20 gene","ncRNA"]
[239,"chr10",21852998,21853602,"+",0,"NA","Intergenic","Intergenic",-28884,"NM_001161845",20393,"Mm.28405","NM_011361","ENSMUSG00000019970","Sgk1","Sgk","serum/glucocorticoid regulated kinase 1","protein-coding"]
[2635,"chr9",72076210,72076817,"+",0,"NA","intron (NM_011544, intron 3 of 20)","intron (NM_011544, intron 3 of 20)",34688,"NM_001253862",21406,"Mm.171615","NM_011544","ENSMUSG00000032228","Tcf12","A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20","transcription factor 12","protein-coding"]
[122,"chr1",134106452,134106606,"+",0,"NA","Intergenic","Intergenic",-4713,"NM_001284524",71884,"Mm.328268","NM_027979","ENSMUSG00000026450","Chit1","2300002L19Rik","chitinase 1 (chitotriosidase)","protein-coding"]
[269,"chr10",67377083,67377611,"+",0,"NA","Intergenic","Intergenic",-92066,"NM_001036293",641340,"Mm.136223","NM_001036293","ENSMUSG00000075000","Nrbf2","NRBF-2","nuclear receptor binding factor 2","protein-coding"]
[628,"chr12",81843250,81843989,"+",0,"NA","Intergenic","Intergenic",-16411,"NM_018814",54604,"Mm.86584","NM_018814","ENSMUSG00000021140","Pcnx","2900024E21Rik|3526401J03Rik|AF096286|AI327143|AI413187|Pcnxl1","pecanex homolog (Drosophila)","protein-coding"]
[878,"chr14",99388909,99389284,"+",0,"NA","Intergenic","Intergenic",90405,"NM_009769",12224,"Mm.30262","NM_009769","ENSMUSG00000005148","Klf5","4930520J07Rik|Bteb2|CKLF|IKLF","Kruppel-like factor 5","protein-coding"]
[1223,"chr17",47628400,47628852,"+",0,"NA","Intergenic","Intergenic",-2064,"NM_198421",224836,"Mm.59393","NM_198421",null,"Usp49","C330046L10Rik|Gm545","ubiquitin specific peptidase 49","protein-coding"]
[2277,"chr7",28802048,28804128,"+",0,"NA","Intergenic","MTD|LTR|ERVL-MaLR",-7802,"NM_177301",15388,"Mm.9043","NM_177301","ENSMUSG00000015165","Hnrnpl","C79783|D830027H13Rik|Hnrpl","heterogeneous nuclear ribonucleoprotein L","protein-coding"]
[363,"chr11",29612459,29614306,"+",0,"NA","Intergenic","Intergenic",-65342,"NM_001033865",78294,"Mm.180003","NM_024277","ENSMUSG00000020460","Rps27a","0610006J14Rik|Uba52|Ubb|Ubc","ribosomal protein S27A","protein-coding"]
[2353,"chr7",107681394,107682518,"+",0,"NA","intron (NM_001163557, intron 4 of 25)","intron (NM_001163557, intron 4 of 25)",75112,"NM_001163557",19024,"Mm.2817","NM_008905","ENSMUSG00000036528","Ppfibp2","Cclp1","PTPRF interacting protein, binding protein 2 (liprin beta 2)","protein-coding"]
[733,"chr13",46839310,46840477,"+",0,"NA","intron (NM_010617, intron 4 of 37)","intron (NM_010617, intron 4 of 37)",89825,"NM_010617",16553,"Mm.342703","NM_010617","ENSMUSG00000021375","Kif13a","4930505I07Rik|mKIAA4109","kinesin family member 13A","protein-coding"]
[2159,"chr6",55006010,55006675,"+",0,"NA","Intergenic","Intergenic",-13475,"NM_026637",110175,"Mm.294708","NM_026637",null,"Ggct","A030007L17Rik|AA673177|Gctg|Ggc","gamma-glutamyl cyclotransferase","protein-coding"]
[630,"chr12",83706591,83708753,"+",0,"NA","intron (NM_008943, intron 3 of 11)","L1ME4b|LINE|L1",19109,"NM_008943",19164,"Mm.998","NM_008943","ENSMUSG00000019969","Psen1","Ad3h|PS-1|PS1|S182","presenilin 1","protein-coding"]
[997,"chr15",85684724,85685618,"+",0,"NA","Intergenic","Intergenic",-18602,"NR_110483",102800312,"Mm.33117","NR_110483",null,"Lincppara","Mirlet7bhg|linc-Ppara","long intergenic noncoding RNA near Ppara","ncRNA"]
[1449,"chr2",9791223,9793011,"+",0,"NA","Intergenic","Intergenic",86483,"NM_008091",14462,"Mm.313866","NM_008091","ENSMUSG00000015619","Gata3","Gata-3|jal","GATA binding protein 3","protein-coding"]
[608,"chr12",75866373,75867997,"+",0,"NA","intron (NM_001005510, intron 2 of 115)","intron (NM_001005510, intron 2 of 115)",-41918,"NR_039560",100628610,null,"NR_039560","ENSMUSG00000092922","Mir5101","mmu-mir-5101|mu-mir-5101","microRNA 5101","ncRNA"]
[1234,"chr17",70753946,70755723,"+",0,"NA","intron (NM_001128181, intron 5 of 9)","intron (NM_001128181, intron 5 of 9)",91943,"NM_001164077",21815,"Mm.101034","NM_009372","ENSMUSG00000047407","Tgif1","AA959811|AI462167|Tgif","TGFB-induced factor homeobox 1","protein-coding"]
[1649,"chr2",167817596,167817965,"+",0,"NA","Intergenic","Intergenic",-114547,"NM_011201",19246,"Mm.277916","NM_011201","ENSMUSG00000027540","Ptpn1","PTP-1B|PTP-HA2|PTP1B","protein tyrosine phosphatase, non-receptor type 1","protein-coding"]
[2226,"chr6",125486579,125487153,"+",0,"NA","intron (NM_007657, intron 1 of 7)","intron (NM_007657, intron 1 of 7)",7889,"NM_007657",12527,"Mm.210676","NM_007657","ENSMUSG00000030342","Cd9","Tspan29","CD9 antigen","protein-coding"]
[1314,"chr18",50160248,50160749,"+",0,"NA","intron (NM_008292, intron 11 of 23)","RLTR11A2|LTR|ERVK",32297,"NM_008292",15488,"Mm.277857","NM_008292","ENSMUSG00000024507","Hsd17b4","17-beta-HSD|17[b]-HSD|DBP|MFE-2|MFP2|MPF-2|Mfp-2|perMFE-2","hydroxysteroid (17-beta) dehydrogenase 4","protein-coding"]
[1798,"chr3",131250279,131250760,"+",0,"NA","intron (NM_008212, intron 1 of 7)","intron (NM_008212, intron 1 of 7)",21582,"NM_008212",15107,"Mm.260164","NM_008212","ENSMUSG00000027984","Hadh","AA409008|AU019341|AW742602|HCDH|Hadhsc|Schad","hydroxyacyl-Coenzyme A dehydrogenase","protein-coding"]
[1474,"chr2",25987117,25987386,"+",0,"NA","Intergenic","Intergenic",-3969,"NM_001276361",227634,"Mm.36834","NM_001115076","ENSMUSG00000026933","Camsap1","9530003A05Rik|C77823|PRO2405","calmodulin regulated spectrin-associated protein 1","protein-coding"]
[2535,"chr8",126685878,126687466,"+",0,"NA","Intergenic","Intergenic",-93236,"NM_001164598",270110,"Mm.334918","NM_001164598","ENSMUSG00000051495","Irf2bp2","E130305N23Rik|IRF-2BP2","interferon regulatory factor 2 binding protein 2","protein-coding"]
[125,"chr1",134554378,134555160,"+",0,"NA","Intergenic","Intergenic",-5087,"NM_001291015",71001,"Mm.158529","NM_183292","ENSMUSG00000046367","Mgat4e","4931440L10Rik","MGAT4 family, member E","protein-coding"]
[522,"chr11",117207675,117208154,"+",0,"NA","intron (NM_001113486, intron 1 of 11)","B1_Mur4|SINE|Alu",8253,"NM_001113486",53860,"Mm.38450","NM_017380","ENSMUSG00000059248","2009-09-01","MSF1|Msf|PNUTL4|Sint1","septin 9","protein-coding"]
[1632,"chr2",156730978,156732803,"+",0,"NA","intron (NM_001042487, intron 1 of 6)","intron (NM_001042487, intron 1 of 6)",10611,"NM_001042487",228836,"Mm.22094","NM_146128","ENSMUSG00000061689","Dlgap4","AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16","discs, large homolog-associated protein 4 (Drosophila)","protein-coding"]
[44,"chr1",69332134,69332319,"+",0,"NA","Intergenic","Intergenic",-224167,"NM_010154",13869,"Mm.442420","NM_010154","ENSMUSG00000062209","Erbb4","Her4|c-erbB-4","v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)","protein-coding"]
[1423,"chr19",47492337,47493808,"+",0,"NA","Intergenic","MamGypLTR1b|LTR|Gypsy",-19910,"NR_045322",100503104,"Mm.442735","NR_045322","ENSMUSG00000097990","Gm19557","-","predicted gene, 19557","ncRNA"]
[2412,"chr8",21759109,21760231,"+",0,"NA","Intergenic","Intergenic",-16885,"NM_007843",13214,"Mm.431316","NM_007843","ENSMUSG00000044748","Defb1","AW260221|BD-1","defensin beta 1","protein-coding"]
[2152,"chr6",53462476,53462720,"+",0,"NA","Intergenic","Intergenic",-110776,"NM_172728",231991,"Mm.321138","NM_172728","ENSMUSG00000053007","Creb5","Crebpa|D430026C09Rik","cAMP responsive element binding protein 5","protein-coding"]
[1687,"chr3",52158077,52158906,"+",0,"NA","Intergenic","Intergenic",-53485,"NM_001004176",433586,"Mm.234972","NM_001004176","ENSMUSG00000061143","Maml3","AV234550|BC049812|Mam-2|mKIAA1816","mastermind like 3 (Drosophila)","protein-coding"]
[667,"chr12",119388323,119388483,"+",0,"NA","Intergenic","Intergenic",-55007,"NM_001163136",238455,"Mm.31376","NM_001163136","ENSMUSG00000041886","Macc1","4732474O15Rik|Gm267","metastasis associated in colon cancer 1","protein-coding"]
[1188,"chr17",27145964,27146206,"+",0,"NA","intron (NM_173027, intron 5 of 5)","intron (NM_173027, intron 5 of 5)",-12194,"NM_026063",67267,"Mm.272389","NM_026063","ENSMUSG00000024208","Uqcc2","2900010M23Rik|Cbp6|M19|Mnf1","ubiquinol-cytochrome c reductase complex assembly factor 2","protein-coding"]
[2008,"chr5",43071682,43072071,"+",0,"NA","Intergenic","Intergenic",-161587,"NM_175937",231207,"Mm.7233","NM_175937","ENSMUSG00000039782","Cpeb2","A630055H10Rik|Cpe-bp2","cytoplasmic polyadenylation element binding protein 2","protein-coding"]
[714,"chr13",38163303,38163839,"+",0,"NA","intron (NM_023842, intron 1 of 23)","intron (NM_023842, intron 1 of 23)",12277,"NM_023842",109620,"Mm.355327","NM_023842","ENSMUSG00000054889","Dsp","2300002E22Rik|5730453H04Rik|AA407887|AA407888|AW109828|DP|rul","desmoplakin","protein-coding"]
[1280,"chr18",20110010,20111116,"+",0,"NA","intron (NM_013504, intron 2 of 16)","CT-rich|Low_complexity|Low_complexity",4210,"NM_001291804",13505,"Mm.33740","NM_013504",null,"Dsc1","1110020A10Rik|AI507491|Dsc1a|Dsc1b","desmocollin 1","protein-coding"]
[1564,"chr2",102881764,102883387,"+",0,"NA","intron (NM_001039150, intron 1 of 13)","intron (NM_001039150, intron 1 of 13)",19090,"NM_001177785",12505,"Mm.423621","NM_009851","ENSMUSG00000005087","Cd44","AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1","CD44 antigen","protein-coding"]
[313,"chr10",96689756,96690941,"+",0,"NA","Intergenic","(TTTTTG)n|Simple_repeat|Simple_repeat",73347,"NM_007569",12226,"Mm.23811","NM_007569","ENSMUSG00000036478","Btg1","AI426953|AW546738","B cell translocation gene 1, anti-proliferative","protein-coding"]
[2017,"chr5",53961703,53961859,"+",0,"NA","Intergenic","Intergenic",-36742,"NM_001081103",116873,"Mm.265985","NM_054083","ENSMUSG00000039156","Stim2","-","stromal interaction molecule 2","protein-coding"]
[2663,"chr9",90035564,90036410,"+",0,"NA","Intergenic","Intergenic",-18280,"NM_007801",13036,"Mm.2277","NM_007801","ENSMUSG00000032359","Ctsh","AL022844","cathepsin H","protein-coding"]
[2661,"chr9",85481218,85481467,"+",0,"NA","Intergenic","Intergenic",-154192,"NM_001160379",212943,"Mm.74610","NM_001160378","ENSMUSG00000032265","Fam46a","D930050G01Rik","family with sequence similarity 46, member A","protein-coding"]
[1324,"chr18",61744695,61747189,"+",0,"NA","intron (NM_178928, intron 9 of 18)","intron (NM_178928, intron 9 of 18)",19552,"NR_029432",68982,"Mm.441992","NR_029432","ENSMUSG00000098702","1500015A07Rik","-","RIKEN cDNA 1500015A07 gene","ncRNA"]
[397,"chr11",61283400,61284720,"+",0,"NA","Intergenic","B1_Mur4|SINE|Alu",-16874,"NM_007437",11671,"Mm.398221","NM_007437","ENSMUSG00000010025","Aldh3a2","AI194803|Ahd-3|Ahd-3r|Ahd3|Ahd3-r|Aldh4|Aldh4-r|FALDH","aldehyde dehydrogenase family 3, subfamily A2","protein-coding"]
[1096,"chr16",31570049,31570806,"+",0,"NA","Intergenic","Intergenic",-93016,"NM_001252435",13383,"Mm.382","NM_007862","ENSMUSG00000022770","Dlg1","B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187","discs, large homolog 1 (Drosophila)","protein-coding"]
[1657,"chr2",170132841,170134431,"+",0,"NA","intron (NM_001159683, intron 1 of 6)","CpG",-2416,"NM_001033299",228913,"Mm.22858","NM_001033299","ENSMUSG00000052056","Zfp217","4933431C08Rik|AW987152|Gm562|ZABC1|Znf217","zinc finger protein 217","protein-coding"]
[2185,"chr6",94640117,94640896,"+",0,"NA","intron (NM_008377, intron 3 of 18)","intron (NM_008377, intron 3 of 18)",-34091,"NR_106008",102466992,null,"NR_106008","ENSMUSG00000098531","Mir7041","Gm27872|mmu-mir-7041","microRNA 7041","ncRNA"]
[2717,"chr9",122096927,122097166,"+",0,"NA","Intergenic","Intergenic",-20220,"NM_001164572",20623,"Mm.257989","NM_133741","ENSMUSG00000038145","Snrk","2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096","SNF related kinase","protein-coding"]
[1191,"chr17",28697736,28698256,"+",0,"NA","intron (NM_001168514, intron 2 of 12)","B4A|SINE|B4",5428,"NM_001168513",26416,"Mm.311337","NM_011951","ENSMUSG00000053436","Mapk14","CSBP2|Crk1|Csbp1|Mxi2|PRKM14|PRKM15|p38|p38-alpha|p38MAPK|p38a|p38alpha","mitogen-activated protein kinase 14","protein-coding"]
[459,"chr11",97286598,97288440,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-6943,"NM_008942",19155,"Mm.29824","NM_008942","ENSMUSG00000001441","Npepps","AAP-S|MP100|Psa|R74825|goku","aminopeptidase puromycin sensitive","protein-coding"]
[823,"chr14",20641151,20641673,"+",0,"NA","Intergenic","Intergenic",15128,"NM_021508",59011,"Mm.439911","NM_021508","ENSMUSG00000068697","Myoz1","2310001N11Rik|AV090278|FATZ|Myoz","myozenin 1","protein-coding"]
[1495,"chr2",32894950,32895371,"+",0,"NA","intron (NM_146119, intron 1 of 13)","RSINE1|SINE|B4",19026,"NM_146119",227737,"Mm.301646","NM_146119","ENSMUSG00000026796","Fam129b","9130404D14Rik","family with sequence similarity 129, member B","protein-coding"]
[771,"chr13",73971359,73971827,"+",0,"NA","intron (NM_027704, intron 2 of 9)","intron (NM_027704, intron 2 of 9)",7731,"NM_027704",71164,"Mm.66995","NM_027704","ENSMUSG00000069189","Zdhhc11","4933421L13Rik|DHHC-11|Zdhhc20","zinc finger, DHHC domain containing 11","protein-coding"]
[1753,"chr3",96679736,96679933,"+",0,"NA","intron (NM_001081139, intron 4 of 12)","intron (NM_001081139, intron 4 of 12)",9703,"NM_001081139",213121,"Mm.39732","NM_001081139","ENSMUSG00000038354","Ankrd35","4732436F15Rik","ankyrin repeat domain 35","protein-coding"]
[401,"chr11",62824956,62826619,"+",0,"NA","intron (NM_053169, intron 1 of 5)","intron (NM_053169, intron 1 of 5)",5534,"NM_053169",94092,"Mm.117087","NM_053169","ENSMUSG00000047821","Trim16","9130006M08Rik|AI482483|EBBP","tripartite motif-containing 16","protein-coding"]
[2688,"chr9",104362316,104362564,"+",0,"NA","Intergenic","B1_Mur2|SINE|Alu",-24718,"NM_207668",56318,"Mm.19941","NM_019807","ENSMUSG00000032561","Acpp","5'-NT|A030005E02Rik|FRAP|Lap|PAP|Ppal","acid phosphatase, prostate","protein-coding"]
[186,"chr1",180779646,180779764,"+",0,"NA","Intergenic","Intergenic",33900,"NM_008210",15078,"Mm.138832","NM_008210","ENSMUSG00000060743","H3f3a","H3.3A","H3 histone, family 3A","protein-coding"]
[1797,"chr3",129587869,129588644,"+",0,"NA","intron (NM_130450, intron 2 of 4)","intron (NM_130450, intron 2 of 4)",55870,"NM_130450",170439,"Mm.314113","NM_130450","ENSMUSG00000041220","Elovl6","C77826|FAE|LCE","ELOVL family member 6, elongation of long chain fatty acids (yeast)","protein-coding"]
[1119,"chr16",58745143,58745530,"+",0,"NA","Intergenic","MLT1G3|LTR|ERVL-MaLR",15904,"NM_147001",259003,"Mm.390862","NM_147001","ENSMUSG00000071510","Olfr172","MOR184-2","olfactory receptor 172","protein-coding"]
[1914,"chr4",126259294,126259438,"+",0,"NA","Intergenic","Intergenic",-3039,"NM_013718",27096,"Mm.8392","NM_013718","ENSMUSG00000028847","Trappc3","1110058K12Rik|AI835942|AU019197|Bet3","trafficking protein particle complex 3","protein-coding"]
[1705,"chr3",81197433,81197694,"+",0,"NA","intron (NM_019971, intron 3 of 5)","intron (NM_019971, intron 3 of 5)",161147,"NM_019971",54635,"Mm.331089","NM_019971","ENSMUSG00000028019","Pdgfc","1110064L01Rik|AI647969|PDGF-C","platelet-derived growth factor, C polypeptide","protein-coding"]
[1919,"chr4",128997983,128998327,"+",0,"NA","intron (NM_001033966, intron 1 of 5)","intron (NM_001033966, intron 1 of 5)",4931,"NM_001033966",11637,"Mm.29460","NM_016895","ENSMUSG00000028792","Ak2","Ak-2|D4Ertd220e","adenylate kinase 2","protein-coding"]
[1938,"chr4",135566575,135567437,"+",0,"NA","intron (NM_001013756, intron 1 of 15)","intron (NM_001013756, intron 1 of 15)",6614,"NM_001013756",230824,"Mm.331972","NM_001013756","ENSMUSG00000037188","Grhl3","AI561912|Get1|Som|Tfcp2l4|ct","grainyhead-like 3 (Drosophila)","protein-coding"]
[915,"chr14",121611578,121611896,"+",0,"NA","intron (NM_134074, intron 27 of 52)","MLT1J|LTR|ERVL-MaLR",86680,"NM_001081039",105445,"Mm.441054","NM_134074","ENSMUSG00000025558","Dock9","AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058","dedicator of cytokinesis 9","protein-coding"]
[1586,"chr2",129411926,129412632,"+",0,"NA","Intergenic","Intergenic",-41140,"NM_008361",16176,"Mm.222830","NM_008361","ENSMUSG00000027398","Il1b","IL-1beta|Il-1b","interleukin 1 beta","protein-coding"]
[1986,"chr5",17556563,17556912,"+",0,"NA","Intergenic","Intergenic",-18079,"NM_013657",20348,"Mm.5071","NM_013657","ENSMUSG00000028780","Sema3c","1110036B02Rik|SemE|Semae","sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C","protein-coding"]
[1456,"chr2",19578962,19579812,"+",0,"NA","Intergenic","Intergenic",-25477,"NM_027600",70909,"Mm.158488","NM_027600","ENSMUSG00000026734","4921504E06Rik","4921522E24Rik","RIKEN cDNA 4921504E06 gene","protein-coding"]
[2606,"chr9",65201878,65202314,"+",0,"NA","Intergenic","Intergenic",-12594,"NM_177460",214424,"Mm.31129","NM_177460","ENSMUSG00000032392","Parp16","ARTD15|BC055447|C79952|PARP-16","poly (ADP-ribose) polymerase family, member 16","protein-coding"]
[404,"chr11",67527008,67527673,"+",0,"NA","Intergenic","Intergenic",-5658,"NM_008088",14457,"Mm.40338","NM_008088","ENSMUSG00000033066","Gas7","AW124766|B230343A10Rik|Gas7-cb","growth arrest specific 7","protein-coding"]
[516,"chr11",115903605,115904563,"+",0,"NA","intron (NM_183259, intron 1 of 2)","intron (NM_183259, intron 1 of 2)",3945,"NM_183259",66528,"Mm.275740","NM_183259","ENSMUSG00000048442","Smim5","2210020M01Rik","small integral membrane protein 5","protein-coding"]
[1813,"chr3",149076999,149077114,"+",0,"NA","Intergenic","Intergenic",-122421,"NM_001081298",99633,"Mm.9776","NM_001081298","ENSMUSG00000028184","Adgrl2","AI450192|CIRL-2|Gm619|Lec1|Lphh1|Lphn2|mKIAA0786","adhesion G protein-coupled receptor L2","protein-coding"]
[2004,"chr5",34529268,34529390,"+",0,"NA","intron (NM_011893, intron 1 of 12)","intron (NM_011893, intron 1 of 12)",3545,"NM_011893",24055,"Mm.5012","NM_011893","ENSMUSG00000054520","Sh3bp2","3BP2","SH3-domain binding protein 2","protein-coding"]
[2060,"chr5",105923928,105924045,"+",0,"NA","Intergenic","B3|SINE|B2",47418,"NM_018759",54367,"Mm.248876","NM_018759","ENSMUSG00000029290","Zfp326","5730470H14Rik|ZAN75|Znf326","zinc finger protein 326","protein-coding"]
[1551,"chr2",84631626,84632819,"+",0,"NA","intron (NM_007615, intron 1 of 19)","intron (NM_007615, intron 1 of 19)",18288,"NM_001085453",12388,"Mm.35738","NM_007615","ENSMUSG00000034101","Ctnnd1","AA409437|AU019353|Catns|Ctnnd|P120|mKIAA0384","catenin (cadherin associated protein), delta 1","protein-coding"]
[702,"chr13",37609453,37609989,"+",0,"NA","Intergenic","B3|SINE|B2",-216317,"NM_026830",68750,"Mm.491109","NM_026830","ENSMUSG00000039087","Rreb1","1110037N09Rik|AA414966|B930013M22Rik","ras responsive element binding protein 1","protein-coding"]
[2297,"chr7",45605662,45606004,"+",0,"NA","Intergenic","Intergenic",9657,"NM_020013",56636,"Mm.143736","NM_020013","ENSMUSG00000030827","Fgf21","-","fibroblast growth factor 21","protein-coding"]
[2163,"chr6",67013157,67014567,"+",0,"NA","intron (NM_001177560, intron 3 of 4)","intron (NM_001177560, intron 3 of 4)",-22737,"NR_040278",320172,"Mm.449039","NR_040278","ENSMUSG00000087231","E230016M11Rik","-","RIKEN cDNA E230016M11 gene","ncRNA"]
[2214,"chr6",120831534,120831799,"+",0,"NA","Intergenic","Intergenic",-4564,"NM_153516",94044,"Mm.27990","NM_153516","ENSMUSG00000009112","Bcl2l13","BCL-RAMBO|E430016C20Rik|Mil-1|Mil1","BCL2-like 13 (apoptosis facilitator)","protein-coding"]
[2346,"chr7",98170606,98172089,"+",0,"NA","intron (NM_007602, intron 1 of 12)","intron (NM_007602, intron 1 of 12)",-5847,"NR_045972",330599,"Mm.406608","NR_045969",null,"Gm16938","-","predicted gene, 16938","ncRNA"]
[2195,"chr6",108532035,108533265,"+",0,"NA","intron (NM_010585, intron 60 of 61)","intron (NM_010585, intron 60 of 61)",42907,"NR_106121",102465766,null,"NR_106121","ENSMUSG00000105697","Mir7661","mmu-mir-7661","microRNA 7661","ncRNA"]
[561,"chr12",51735267,51735424,"+",0,"NA","intron (NM_021710, intron 5 of 5)","intron (NM_021710, intron 5 of 5)",-43431,"NM_052973",94186,"Mm.65979","NM_052973","ENSMUSG00000020954","Strn3","Gs2na|SG2NA","striatin, calmodulin binding protein 3","protein-coding"]
[2112,"chr5",150222322,150223537,"+",0,"NA","Intergenic","(TG)n|Simple_repeat|Simple_repeat",-37001,"NM_172887",320365,"Mm.216590","NM_172887","ENSMUSG00000056602","Fry","13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143","furry homolog (Drosophila)","protein-coding"]
[2555,"chr9",31688521,31688935,"+",0,"NA","Intergenic","Intergenic",-224490,"NM_144936",235135,"Mm.390134","NM_144936","ENSMUSG00000041737","Tmem45b","BC018222","transmembrane protein 45b","protein-coding"]
[2221,"chr6",124920068,124921505,"+",0,"NA","Intergenic","Intergenic",-2840,"NM_026988",69202,"Mm.142187","NM_026988","ENSMUSG00000030122","Ptms","2610009E16Rik","parathymosin","protein-coding"]
[357,"chr11",20870610,20870758,"+",0,"NA","Intergenic","Intergenic",-39576,"NM_173752",216551,"Mm.76694","NM_173752","ENSMUSG00000042363","Lgalsl","1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla","lectin, galactoside binding-like","protein-coding"]
[1307,"chr18",43932662,43933247,"+",0,"NA","Intergenic","Intergenic",-30287,"NM_001081180",72432,"Mm.35369","NM_001081180","ENSMUSG00000055561","Spink5","2310065D10Rik|AV238912|LEKT1|LETK1|VAKT1","serine peptidase inhibitor, Kazal type 5","protein-coding"]
[1812,"chr3",148744188,148744889,"+",0,"NA","Intergenic","LTR81A|LTR|Gypsy",210097,"NM_001081298",99633,"Mm.9776","NM_001081298","ENSMUSG00000028184","Adgrl2","AI450192|CIRL-2|Gm619|Lec1|Lphh1|Lphn2|mKIAA0786","adhesion G protein-coupled receptor L2","protein-coding"]
[1941,"chr4",135623696,135623953,"+",0,"NA","Intergenic","Intergenic",-2831,"NR_015613",73937,"Mm.292326","NM_028688","ENSMUSG00000086788","1700029M20Rik","4930406E24Rik","RIKEN cDNA 1700029M20 gene","ncRNA"]
[1769,"chr3",103145068,103148247,"+",0,"NA","intron (NM_177857, intron 7 of 18)","intron (NM_177857, intron 7 of 18)",19101,"NM_177857",329727,"Mm.293641","NM_177857","ENSMUSG00000007379","Dennd2c","A930010I20Rik","DENN/MADD domain containing 2C","protein-coding"]
[2475,"chr8",91397536,91397824,"+",0,"NA","intron (NM_011936, intron 1 of 8)","intron (NM_011936, intron 1 of 8)",84155,"NM_011936",26383,"Mm.4375","NM_011936","ENSMUSG00000055932","Fto","AW743446|mKIAA1752","fat mass and obesity associated","protein-coding"]
[455,"chr11",96291349,96291673,"+",0,"NA","intron (NR_131758, intron 2 of 2)","intron (NR_131758, intron 2 of 2)",4865,"NM_010460",15415,"Mm.390366","NM_010460","ENSMUSG00000038721","Hoxb7","AI325018|Hox-2.3","homeobox B7","protein-coding"]
[1875,"chr4",86712501,86714056,"+",0,"NA","Intergenic","Intergenic",-35277,"NM_184088",329877,"Mm.273718","NM_184088","ENSMUSG00000038024","Dennd4c","1700065A05Rik|AA420392","DENN/MADD domain containing 4C","protein-coding"]
[1673,"chr3",21678884,21679461,"+",0,"NA","Intergenic","Intergenic",-397480,"NM_030732",81004,"Mm.202966","NM_030732","ENSMUSG00000027630","Tbl1xr1","8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1","transducin (beta)-like 1X-linked receptor 1","protein-coding"]
[2132,"chr6",31115440,31115639,"+",0,"NA","intron (NR_110471, intron 3 of 3)","intron (NR_110471, intron 3 of 3)",-52446,"NR_029532",387223,null,"NR_029532","ENSMUSG00000065604","Mir29b-1","Mirn29b|Mirn29b-1|mir-29b-1","microRNA 29b-1","ncRNA"]
[297,"chr10",84217133,84217323,"+",0,"NA","Intergenic","Intergenic",223243,"NM_001004363",77976,"Mm.25874","NM_001004363","ENSMUSG00000020032","Nuak1","AU014801|AW494241|B230104P22Rik|Omphk1","NUAK family, SNF1-like kinase, 1","protein-coding"]
[963,"chr15",61158334,61158891,"+",0,"NA","Intergenic","Intergenic",-237342,"NM_001081067",117586,"Mm.291499","NM_001081067","ENSMUSG00000022347","A1bg","C44","alpha-1-B glycoprotein","protein-coding"]
[2612,"chr9",68955742,68956623,"+",0,"NA","intron (NM_013646, intron 1 of 10)","intron (NM_013646, intron 1 of 10)",190836,"NR_033299",320440,"Mm.483129","NM_177159",null,"9530091C08Rik","-","RIKEN cDNA 9530091C08 gene","ncRNA"]
[2031,"chr5",64749768,64750581,"+",0,"NA","Intergenic","Intergenic",-53349,"NM_008453",16599,"Mm.392759","NM_008453","ENSMUSG00000029178","Klf3","9930027G08Rik|AL024007|Bklf|Tef-2","Kruppel-like factor 3 (basic)","protein-coding"]
[2272,"chr7",27223926,27224832,"+",0,"NA","intron (NM_181593, intron 1 of 6)","RLTR20A4|LTR|ERVK",4218,"NM_181593",233011,"Mm.30963","NM_181593","ENSMUSG00000003752","Itpkc","9130023N17Rik","inositol 1,4,5-trisphosphate 3-kinase C","protein-coding"]
[1889,"chr4",106301374,106301873,"+",0,"NA","Intergenic","Intergenic",-14590,"NM_183225",329908,"Mm.234544","NM_183225","ENSMUSG00000028514","Usp24","2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851","ubiquitin specific peptidase 24","protein-coding"]
[2692,"chr9",107269835,107270074,"+",0,"NA","intron (NM_001316691, intron 1 of 7)","intron (NM_001316691, intron 1 of 7)",19442,"NM_001316691",102626,"Mm.222612","NM_178907","ENSMUSG00000032577","Mapkapk3","3PK|AI874665|MAPKAP-K3|MAPKAP3|MK-3|MK3|MapkKapk3","mitogen-activated protein kinase-activated protein kinase 3","protein-coding"]
[2646,"chr9",77587731,77588117,"+",0,"NA","Intergenic","Intergenic",-43072,"NM_001146048",214345,"Mm.28534","NM_172528","ENSMUSG00000032352","Lrrc1","A430093J20Rik|AU016091|D030059I21|mKIAA4018","leucine rich repeat containing 1","protein-coding"]
[10,"chr1",34121059,34121279,"+",0,"NA","intron (NM_001276764, intron 8 of 102)","intron (NM_001276764, intron 8 of 102)",3810,"NR_105861",102466987,null,"NR_105861","ENSMUSG00000105982","Mir6896","mmu-mir-6896","microRNA 6896","ncRNA"]
[980,"chr15",77799239,77801230,"+",0,"NA","intron (NM_022410, intron 3 of 40)","intron (NM_022410, intron 3 of 40)",41941,"NM_022410",17886,"Mm.29677","NM_022410","ENSMUSG00000022443","Myh9","Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6","myosin, heavy polypeptide 9, non-muscle","protein-coding"]
[1596,"chr2",137097044,137098232,"+",0,"NA","intron (NM_013822, intron 5 of 25)","intron (NM_013822, intron 5 of 25)",18882,"NM_013822",16449,"Mm.22398","NM_013822","ENSMUSG00000027276","Jag1","ABE2|Gsfabe2|Htu|Ozz|Ser-1","jagged 1","protein-coding"]
[550,"chr12",24591157,24593235,"+",0,"NA","intron (NM_145890, intron 6 of 13)","intron (NM_145890, intron 6 of 13)",11477,"NM_145890",195733,"Mm.263068","NM_145890","ENSMUSG00000020656","Grhl1","LBP-32|MGR|Tcfcp2l2","grainyhead-like 1 (Drosophila)","protein-coding"]
[2083,"chr5",123862438,123864486,"+",0,"NA","TTS (NM_030701)","TTS (NM_030701)",2054,"NM_030701",80885,"Mm.440567","NM_030701","ENSMUSG00000045502","Hcar2","Gpr109a|Gpr109b|HM74|Niacr1|PUMA-G|Pumag|mHM74b","hydroxycarboxylic acid receptor 2","protein-coding"]
[2697,"chr9",110345695,110346002,"+",0,"NA","intron (NM_001001144, intron 1 of 22)","intron (NM_001001144, intron 1 of 22)",12492,"NM_001001144",235623,"Mm.288741","NM_001001144","ENSMUSG00000032485","Scap","9530044G19|mKIAA0199","SREBF chaperone","protein-coding"]
[2097,"chr5",137707154,137707292,"+",0,"NA","Intergenic","Intergenic",-22470,"NM_001303266",231801,"Mm.260869","NM_145566","ENSMUSG00000029722","Agfg2","A630095P14Rik|Hrbl|RAB-R|RABR","ArfGAP with FG repeats 2","protein-coding"]
[1081,"chr16",26089088,26089513,"+",0,"NA","intron (NM_173379, intron 1 of 14)","intron (NM_173379, intron 1 of 14)",16484,"NM_173379",210530,"Mm.326869","NM_173379",null,"P3h2","4832416N06|AW553532|Leprel1|Mlat4","prolyl 3-hydroxylase 2","protein-coding"]
[1651,"chr2",167919493,167920958,"+",0,"NA","Intergenic","Intergenic",-12102,"NM_011201",19246,"Mm.277916","NM_011201","ENSMUSG00000027540","Ptpn1","PTP-1B|PTP-HA2|PTP1B","protein tyrosine phosphatase, non-receptor type 1","protein-coding"]
[958,"chr15",59477862,59478385,"+",0,"NA","intron (NM_026746, intron 4 of 6)","intron (NM_026746, intron 4 of 6)",103925,"NM_001164604",68501,"Mm.27762","NM_026746","ENSMUSG00000059586","Nsmce2","1110014D18Rik|AI661537","non-SMC element 2 homolog (MMS21, S. cerevisiae)","protein-coding"]
[1569,"chr2",103271309,103272112,"+",0,"NA","intron (NM_007914, intron 6 of 8)","intron (NM_007914, intron 6 of 8)",31486,"NM_007914",13661,"Mm.10724","NM_007914","ENSMUSG00000012350","Ehf","9030625L19Rik|AU019492","ets homologous factor","protein-coding"]
[1736,"chr3",93596726,93597767,"+",0,"NA","Intergenic","Intergenic",42129,"NM_009112",20194,"Mm.1","NM_009112","ENSMUSG00000041959","S100a10","42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11","S100 calcium binding protein A10 (calpactin)","protein-coding"]
[592,"chr12",70713088,70713252,"+",0,"NA","Intergenic","Intergenic",-112344,"NM_028127",319710,"Mm.2962","NM_028127","ENSMUSG00000048285","Frmd6","2610019M19Rik|4930488L10Rik|AW212977|Willin","FERM domain containing 6","protein-coding"]
[2542,"chr9",14624901,14625016,"+",0,"NA","Intergenic","MIRb|SINE|MIR",-9958,"NM_001081395",75723,"Mm.159552","NM_001081395","ENSMUSG00000013076","Amotl1","2310010G08Rik|2310067L22Rik|4932416D09Rik|JEAP|mFLJ00155","angiomotin-like 1","protein-coding"]
[2123,"chr6",17566582,17566710,"+",0,"NA","intron (NM_008591, intron 20 of 21)","intron (NM_008591, intron 20 of 21)",-70452,"NM_007604",12343,"Mm.392504","NM_007604",null,"Capza2","1110053K06Rik|AW208808|Cappa2","capping protein (actin filament) muscle Z-line, alpha 2","protein-coding"]
[1978,"chr4",150789064,150789179,"+",0,"NA","Intergenic","Intergenic",65828,"NR_040649",73348,"Mm.396218","NR_040649","ENSMUSG00000078492","1700045H11Rik","-","RIKEN cDNA 1700045H11 gene","ncRNA"]
[2364,"chr7",113048029,113048387,"+",0,"NA","Intergenic","Intergenic",93807,"NR_045978",75239,"Mm.381688","NR_045978",null,"4930543E12Rik","4930545H14Rik","RIKEN cDNA 4930543E12 gene","ncRNA"]
[1640,"chr2",163467333,163467857,"+",0,"NA","Intergenic","B1_Mur1|SINE|Alu",-4950,"NR_028122",69517,"Mm.395343","NR_028122","ENSMUSG00000053353","2310001K24Rik","-","RIKEN cDNA 2310001K24 gene","ncRNA"]
[173,"chr1",171470219,171470349,"+",0,"NA","Intergenic","ID_B1|SINE|B4",32723,"NM_172647",16456,"Mm.294882","NM_172647","ENSMUSG00000038235","F11r","9130004G24|AA638916|ESTM33|JAM|JAM-1|JAM-A|Jcam|Jcam1|Ly106","F11 receptor","protein-coding"]
[530,"chr11",121090798,121091384,"+",0,"NA","Intergenic","Intergenic",-9952,"NM_145373",209588,"Mm.69553","NM_145373","ENSMUSG00000025165","Sectm1a","BC010462","secreted and transmembrane 1A","protein-coding"]
[66,"chr1",86404323,86404520,"+",0,"NA","Intergenic","Intergenic",-16280,"NM_010341",14767,"Mm.389159","NM_010341","ENSMUSG00000026237","Nmur1","FM-3|Gpr66|NMU-R1|NMU1R|NmU-R","neuromedin U receptor 1","protein-coding"]
[2709,"chr9",116313497,116313960,"+",0,"NA","Intergenic","Intergenic",-138365,"NM_009371",21813,"Mm.172346","NM_009371","ENSMUSG00000032440","Tgfbr2","1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII","transforming growth factor, beta receptor II","protein-coding"]
[2675,"chr9",99165036,99167683,"+",0,"NA","Intergenic","Intergenic",-26148,"NM_029094",74769,"Mm.213128","NM_029094",null,"Pik3cb","1110001J02Rik|AI447572|p110beta","phosphatidylinositol 3-kinase, catalytic, beta polypeptide","protein-coding"]
[470,"chr11",98783126,98783349,"+",0,"NA","Intergenic","Intergenic",-7860,"NM_145434",217166,"Mm.390397","NM_145434","ENSMUSG00000020889","Nr1d1","A530070C09Rik|R75201","nuclear receptor subfamily 1, group D, member 1","protein-coding"]
[2026,"chr5",64472870,64473579,"+",0,"NA","Intergenic","ORR1F|LTR|ERVL-MaLR",-3784,"NR_045411",77382,"Mm.366742","NR_045411","ENSMUSG00000105352","C030018K13Rik","-","RIKEN cDNA C030018K13 gene","ncRNA"]
[1524,"chr2",60829441,60830042,"+",0,"NA","intron (NM_001141931, intron 2 of 13)","intron (NM_001141931, intron 2 of 13)",51697,"NM_001141932",56878,"Mm.259667","NM_020296","ENSMUSG00000026970","Rbms1","2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1","RNA binding motif, single stranded interacting protein 1","protein-coding"]
[2360,"chr7",111109512,111109980,"+",0,"NA","Intergenic","MLT1F2|LTR|ERVL-MaLR",12929,"NR_015573",75479,"Mm.381620","NR_015573",null,"1700012D14Rik","-","RIKEN cDNA 1700012D14 gene","ncRNA"]
[793,"chr13",99323317,99323557,"+",0,"NA","intron (NM_026873, intron 8 of 9)","intron (NM_026873, intron 8 of 9)",21241,"NM_026873",68927,"Mm.276502","NM_026873","ENSMUSG00000021650","Ptcd2","1190005P08Rik","pentatricopeptide repeat domain 2","protein-coding"]
[1205,"chr17",35557245,35557672,"+",0,"NA","TTS (NM_001008424)","TTS (NM_001008424)",5330,"NM_001008424",386463,"Mm.426664","NM_001008424","ENSMUSG00000039518","Cdsn","AI747712","corneodesmosin","protein-coding"]
[1287,"chr18",24112343,24112679,"+",0,"NA","intron (NM_172625, intron 3 of 4)","intron (NM_172625, intron 3 of 4)",9308,"NM_172625",225280,"Mm.258973","NM_172625","ENSMUSG00000047989","Ino80c","D030070L09Rik","INO80 complex subunit C","protein-coding"]
[1696,"chr3",58470008,58470541,"+",0,"NA","Intergenic","Intergenic",54585,"NM_001081229",72033,"Mm.218409","NM_028067","ENSMUSG00000027806","Tsc22d2","1810043J12Rik|5530402M19Rik","TSC22 domain family, member 2","protein-coding"]
[2403,"chr7",144564246,144564402,"+",0,"NA","Intergenic","Intergenic",-10595,"NM_001195086",233977,"Mm.490347","NM_001033319","ENSMUSG00000037519","Ppfia1","C030014K08Rik|C87158|LIP.1|LIP1","protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1","protein-coding"]
[654,"chr12",106571589,106571754,"+",0,"NA","Intergenic","Intergenic",-124005,"NR_036593",76639,"Mm.375609","NR_036593","ENSMUSG00000092066","1700121N20Rik","-","RIKEN cDNA 1700121N20 gene","ncRNA"]
[2261,"chr7",19321099,19322409,"+",0,"NA","Intergenic","Intergenic",-11709,"NM_008036",14282,"Mm.248335","NM_008036","ENSMUSG00000003545","Fosb","-","FBJ osteosarcoma oncogene B","protein-coding"]
[283,"chr10",70256800,70256927,"+",0,"NA","intron (NM_025807, intron 2 of 5)","intron (NM_025807, intron 2 of 5)",11587,"NM_025807",66859,"Mm.19325","NM_025807","ENSMUSG00000037762","Slc16a9","1200003C15Rik|4930425B13Rik|AI552636","solute carrier family 16 (monocarboxylic acid transporters), member 9","protein-coding"]
[156,"chr1",155138607,155138799,"+",0,"NA","intron (NM_008209, intron 1 of 5)","intron (NM_008209, intron 1 of 5)",8077,"NM_008209",15064,"Mm.7580","NM_008209","ENSMUSG00000026471","Mr1","H2ls","major histocompatibility complex, class I-related","protein-coding"]
[59,"chr1",76927765,76928034,"+",0,"NA","Intergenic","Intergenic",418339,"NR_105761",102465175,null,"NR_105761","ENSMUSG00000098611","Mir6343","Gm27304|mmu-mir-6343","microRNA 6343","ncRNA"]
[2091,"chr5",127619071,127620452,"+",0,"NA","Intergenic","Intergenic",-2369,"NM_133895",100561,"Mm.28506","NM_133895","ENSMUSG00000029416","Slc15a4","AA987064|AW742963|C130069N12Rik|PHT1|PTR4","solute carrier family 15, member 4","protein-coding"]
[1971,"chr4",149504685,149504943,"+",0,"NA","Intergenic","RSINE1|SINE|B4",-13427,"NM_023465",67087,"Mm.299735","NM_023465","ENSMUSG00000028988","Ctnnbip1","1110008O09Rik|2310001I19Rik|AW457332|Catnbip1|Icat","catenin beta interacting protein 1","protein-coding"]
[2358,"chr7",110163676,110165571,"+",0,"NA","Intergenic","Intergenic",42564,"NM_009516",22390,"Mm.287173","NM_009516",null,"Wee1","Wee1A","WEE 1 homolog 1 (S. pombe)","protein-coding"]
[1226,"chr17",62783923,62784695,"+",0,"NA","intron (NM_207654, intron 1 of 4)","intron (NM_207654, intron 1 of 4)",97008,"NM_207654",13640,"Mm.7978","NM_010109",null,"Efna5","AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS","ephrin A5","protein-coding"]
[2498,"chr8",106607386,106609632,"+",0,"NA","intron (NM_009864, intron 2 of 15)","intron (NM_009864, intron 2 of 15)",5159,"NM_009864",12550,"Mm.35605","NM_009864","ENSMUSG00000000303","Cdh1","AA960649|ARC-1|E-cad|Ecad|L-CAM|UVO|Um","cadherin 1","protein-coding"]
[1256,"chr17",84146648,84146961,"+",0,"NA","Intergenic","Intergenic",41143,"NM_001001806",12193,"Mm.259321","NM_001001806","ENSMUSG00000045817","Zfp36l2","Brf2|ERF2|Tis11d","zinc finger protein 36, C3H type-like 2","protein-coding"]
[1949,"chr4",137930006,137930737,"+",0,"NA","intron (NM_199307, intron 5 of 19)","ID_B1|SINE|B4",-63085,"NM_001256198",230861,"Mm.268903","NM_172703","ENSMUSG00000028760","Eif4g3","1500002J22Rik|4833436O05|4930523M17Rik|G1-419-52|eIF4GII|repro8","eukaryotic translation initiation factor 4 gamma, 3","protein-coding"]
[2247,"chr6",136629666,136630014,"+",0,"NA","intron (NM_025806, intron 6 of 10)","B1_Mur1|SINE|Alu",32053,"NM_025806",66857,"Mm.3311","NM_025806","ENSMUSG00000030214","Plbd1","1100001H23Rik","phospholipase B domain containing 1","protein-coding"]
[1744,"chr3",95067018,95067422,"+",0,"NA","intron (NM_008847, intron 9 of 14)","(TA)n|Simple_repeat|Simple_repeat",-24606,"NM_008951",19185,"Mm.2261","NM_008951","ENSMUSG00000005625","Psmd4","Af1|Mcb1|angiocidin","proteasome (prosome, macropain) 26S subunit, non-ATPase, 4","protein-coding"]
[1853,"chr4",56204644,56205081,"+",0,"NA","Intergenic","ORR1D1|LTR|ERVL-MaLR",536563,"NM_025271",11471,"Mm.251434","NM_025271","ENSMUSG00000070980","Actl7b","Tact1","actin-like 7b","protein-coding"]
[864,"chr14",70090501,70091461,"+",0,"NA","Intergenic","Intergenic",-9164,"NM_021328",57784,"Mm.24186","NM_021328","ENSMUSG00000022089","Bin3","1700015F07Rik","bridging integrator 3","protein-coding"]
[219,"chr10",3385148,3385351,"+",0,"NA","intron (NM_133485, intron 1 of 3)","intron (NM_133485, intron 1 of 3)",19099,"NM_133485",76142,"Mm.308126","NM_133485","ENSMUSG00000040653","Ppp1r14c","6330514J04Rik|KEPI","protein phosphatase 1, regulatory (inhibitor) subunit 14c","protein-coding"]
[1016,"chr15",98993025,98993975,"+",0,"NA","Intergenic","RSINE1|SINE|B4",7535,"NR_045991",75951,"Mm.441657","NR_045991","ENSMUSG00000097587","4930578M01Rik","3010001K12Rik","RIKEN cDNA 4930578M01 gene","ncRNA"]
[2480,"chr8",92848869,92849661,"+",0,"NA","intron (NM_008610, intron 11 of 12)","intron (NM_008610, intron 11 of 12)",-6085,"NM_173014",270084,"Mm.21463","NM_173014","ENSMUSG00000033192","Lpcat2","A330042H22|Aytl1|Aytl1a|lpafat1","lysophosphatidylcholine acyltransferase 2","protein-coding"]
[2300,"chr7",45800977,45801397,"+",0,"NA","intron (NR_110987, intron 15 of 15)","intron (NR_110987, intron 15 of 15)",13129,"NM_011181",19158,"Mm.272130","NM_011181","ENSMUSG00000003269","Cyth2","ARNO|CLM2|Pscd2","cytohesin 2","protein-coding"]
[799,"chr13",102898175,102899892,"+",0,"NA","intron (NM_175171, intron 4 of 28)","intron (NM_175171, intron 4 of 28)",138778,"NR_130171",76624,"Mm.426384","NR_130171","ENSMUSG00000091906","1700099I09Rik","-","RIKEN cDNA 1700099I09 gene","ncRNA"]
[1170,"chr17",15326349,15327069,"+",0,"NA","Intergenic","Intergenic",27752,"NR_033511",100038481,"Mm.387544","NR_033511",null,"Gm10510","ENSMUSG00000073453","predicted gene 10510","ncRNA"]
[925,"chr15",27633851,27634342,"+",0,"NA","Intergenic","Intergenic",-3403,"NM_001013792",432940,"Mm.309164","NM_001013792","ENSMUSG00000046034","Otulin","C79097|Fam105b|m3Sapc|m7-1Sapc","OTU deubiquitinase with linear linkage specificity","protein-coding"]
[1896,"chr4",112085670,112085803,"+",0,"NA","intron (NM_178786, intron 1 of 10)","L1VL2|LINE|L1",4266,"NM_178786",320640,"Mm.253775","NM_178786","ENSMUSG00000055960","Skint4","9530098N22Rik","selection and upkeep of intraepithelial T cells 4","protein-coding"]
[390,"chr11",58067867,58068669,"+",0,"NA","Intergenic","Intergenic",-35885,"NM_026949",69125,"Mm.28910","NM_026949","ENSMUSG00000020515","Cnot8","1500015I04Rik|1810022F04Rik|AA536816|AU015770|AU043059","CCR4-NOT transcription complex, subunit 8","protein-coding"]
[2368,"chr7",119859565,119861761,"+",0,"NA","intron (NM_001163703, intron 1 of 2)","intron (NM_001163703, intron 1 of 2)",34795,"NM_173408",233805,"Mm.31539","NM_173408","ENSMUSG00000048787","Dcun1d3","1700020A13Rik|BC030335","DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)","protein-coding"]
[1042,"chr16",11173552,11174576,"+",0,"NA","intron (NR_027502, intron 1 of 22)","intron (NR_027502, intron 1 of 22)",2329,"NR_027502",106205,"Mm.226860","NM_145931","ENSMUSG00000037965","Zc3h7a","A430104C18Rik|AI447294|AW556219|HSPC055|Zc3h7|Zc3hdc7","zinc finger CCCH type containing 7 A","protein-coding"]
[1515,"chr2",51140358,51142864,"+",0,"NA","intron (NM_028810, intron 2 of 4)","intron (NM_028810, intron 2 of 4)",7500,"NM_028810",74194,"Mm.46497","NM_028810","ENSMUSG00000017144","Rnd3","2610017M01Rik|AI661404|Arhe|Rhoe","Rho family GTPase 3","protein-coding"]
[1686,"chr3",52069684,52070892,"+",0,"NA","intron (NM_001004176, intron 1 of 4)","intron (NM_001004176, intron 1 of 4)",34718,"NM_001004176",433586,"Mm.234972","NM_001004176","ENSMUSG00000061143","Maml3","AV234550|BC049812|Mam-2|mKIAA1816","mastermind like 3 (Drosophila)","protein-coding"]
[38,"chr1",60169792,60170193,"+",0,"NA","Intergenic","Intergenic",-10607,"NM_173444",269198,"Mm.205224","NM_173444",null,"Nbeal1","2310076G13Rik|A530050O19Rik|A530083I02Rik|AI662228|ALS2CR17","neurobeachin like 1","protein-coding"]
[1955,"chr4",139598536,139599426,"+",0,"NA","intron (NM_001205173, intron 1 of 8)","intron (NM_001205173, intron 1 of 8)",-23913,"NM_175438",212647,"Mm.273571","NM_175438","ENSMUSG00000028737","Aldh4a1","A930035F14Rik|Ahd-1|Ahd1|Aldh4|Aldh5a1|E330022C09|P5cd|P5cdh|P5cdhl|P5cdhs|Ssdh1","aldehyde dehydrogenase 4 family, member A1","protein-coding"]
[196,"chr1",185230211,185230697,"+",0,"NA","intron (NM_001163754, intron 2 of 34)","intron (NM_001163754, intron 2 of 34)",-12472,"NR_034044",100217449,"Mm.429560","NR_034044","ENSMUSG00000077571","Snora36b","MBI-87","small nucleolar RNA, H/ACA box 36B","snoRNA"]
[945,"chr15",38453268,38453386,"+",0,"NA","Intergenic","Intergenic",37220,"NR_105916",102465574,null,"NR_105916","ENSMUSG00000099110","Mir6951","Gm27765|mmu-mir-6951","microRNA 6951","ncRNA"]
[1169,"chr17",14244566,14244742,"+",0,"NA","Intergenic","Intergenic",-34852,"NM_022315",64074,"Mm.30162","NM_022315","ENSMUSG00000023886","Smoc2","1700056C05Rik|5430426J21Rik|Smoc2l","SPARC related modular calcium binding 2","protein-coding"]
[206,"chr1",193512797,193513606,"+",0,"NA","Intergenic","(CA)n|Simple_repeat|Simple_repeat",-5671,"NR_029592",387201,null,"NR_029592","ENSMUSG00000065533","Mir205","Mirn205|mir-205|mmu-mir-205","microRNA 205","ncRNA"]
[118,"chr1",133232193,133232549,"+",0,"NA","Intergenic","Intergenic",-13726,"NM_001160268",240753,"Mm.253559","NM_182930","ENSMUSG00000041757","Plekha6","9530028L01Rik|AU042621|Pepp3","pleckstrin homology domain containing, family A member 6","protein-coding"]
[959,"chr15",59479728,59480332,"+",0,"NA","intron (NM_026746, intron 4 of 6)","intron (NM_026746, intron 4 of 6)",105832,"NM_001164604",68501,"Mm.27762","NM_026746","ENSMUSG00000059586","Nsmce2","1110014D18Rik|AI661537","non-SMC element 2 homolog (MMS21, S. cerevisiae)","protein-coding"]
[1674,"chr3",21937944,21938564,"+",0,"NA","Intergenic","Intergenic",-138398,"NM_030732",81004,"Mm.202966","NM_030732","ENSMUSG00000027630","Tbl1xr1","8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1","transducin (beta)-like 1X-linked receptor 1","protein-coding"]
[358,"chr11",21080535,21082611,"+",0,"NA","Intergenic","B4|SINE|B4",-9751,"NM_023324",67245,"Mm.28957","NM_023324","ENSMUSG00000020134","Peli1","2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e","pellino 1","protein-coding"]
[331,"chr10",116748777,116749190,"+",0,"NA","Intergenic","RMER6C|LTR|ERVK",19730,"NR_131036",75878,"Mm.370607","NR_131036",null,"4930579P08Rik","-","RIKEN cDNA 4930579P08 gene","ncRNA"]
[1065,"chr16",24148728,24148942,"+",0,"NA","Intergenic","Intergenic",-160223,"NM_009744",12053,"Mm.347398","NM_009744","ENSMUSG00000022508","Bcl6","Bcl5","B cell leukemia/lymphoma 6","protein-coding"]
[1659,"chr2",170153508,170155955,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-12056,"NM_001159683",228913,"Mm.22858","NM_001033299","ENSMUSG00000052056","Zfp217","4933431C08Rik|AW987152|Gm562|ZABC1|Znf217","zinc finger protein 217","protein-coding"]
[737,"chr13",48962282,48963324,"+",0,"NA","intron (NM_001033268, intron 1 of 17)","intron (NM_001033268, intron 1 of 17)",5025,"NM_001033268",218236,"Mm.426571","NM_001033268","ENSMUSG00000038014","Fam120a","C9orf10|Ossa","family with sequence similarity 120, member A","protein-coding"]
[767,"chr13",63252766,63253851,"+",0,"NA","intron (NM_001289924, intron 13 of 16)","intron (NM_001289924, intron 13 of 16)",13279,"NR_110521",72061,"Mm.188105","NM_028079","ENSMUSG00000021458","2010111I01Rik","2300006M17Rik|AP-O|Aopep|mir-23b|mir-24-1|mir-27b","RIKEN cDNA 2010111I01 gene","protein-coding"]
[2228,"chr6",126033300,126033682,"+",0,"NA","intron (NM_153589, intron 24 of 25)","ORR1G|LTR|ERVL-MaLR",131469,"NM_001164035",18205,"Mm.267570","NM_008742","ENSMUSG00000049107","Ntf3","AI316846|AI835689|Nt3|Ntf-3","neurotrophin 3","protein-coding"]
[2070,"chr5",118458410,118458894,"+",0,"NA","Intergenic","(TAGA)n|Simple_repeat|Simple_repeat",-102067,"NM_172424",76199,"Mm.206238","NM_172424","ENSMUSG00000018076","Med13l","2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025","mediator complex subunit 13-like","protein-coding"]
[2173,"chr6",86604861,86605075,"+",0,"NA","Intergenic","Intergenic",-23206,"NM_026414",67855,"Mm.183043","NM_026414","ENSMUSG00000033508","Asprv1","2300003P22Rik|AA986851|SASP|SASPase|Taps","aspartic peptidase, retroviral-like 1","protein-coding"]
[1020,"chr15",100056584,100056979,"+",0,"NA","intron (NM_001159361, intron 1 of 37)","intron (NM_001159361, intron 1 of 37)",18117,"NM_001159361",239667,"Mm.243658","NM_172819","ENSMUSG00000023026","Dip2b","4932422C22|AI317237|AI854602|mKIAA1463","DIP2 disco-interacting protein 2 homolog B (Drosophila)","protein-coding"]
[805,"chr13",110907101,110907398,"+",0,"NA","non-coding (NR_131193, exon 5 of 5)","non-coding (NR_131193, exon 5 of 5)",-3403,"NR_131194",102636142,"Mm.417611","NR_131194",null,"4930526H09Rik","-","RIKEN cDNA 4930526H09 gene","ncRNA"]
[84,"chr1",106461393,106462204,"+",0,"NA","Intergenic","Intergenic",84833,"NR_106164",102466254,null,"NR_106164","ENSMUSG00000098344","Mir3473f","Gm27846|mmu-mir-3473f","microRNA 3473f","ncRNA"]
[437,"chr11",87063201,87063314,"+",0,"NA","intron (NM_025638, intron 2 of 9)","intron (NM_025638, intron 2 of 9)",10880,"NM_025638",66569,"Mm.281887","NM_025638","ENSMUSG00000061666","Gdpd1","2610020H15Rik","glycerophosphodiester phosphodiesterase domain containing 1","protein-coding"]
[194,"chr1",182406502,182407204,"+",0,"NA","Intergenic","Intergenic",-2314,"NM_173378",209456,"Mm.287450","NM_173378","ENSMUSG00000026510","Trp53bp2","53BP2|AI746547|ASPP2|PPP1R13A|Tp53bp2|X98550","transformation related protein 53 binding protein 2","protein-coding"]
[1768,"chr3",103141094,103141375,"+",0,"NA","intron (NM_177857, intron 6 of 18)","intron (NM_177857, intron 6 of 18)",13678,"NM_177857",329727,"Mm.293641","NM_177857","ENSMUSG00000007379","Dennd2c","A930010I20Rik","DENN/MADD domain containing 2C","protein-coding"]
[220,"chr10",4620722,4620860,"+",0,"NA","intron (NM_007956, intron 1 of 8)","intron (NM_007956, intron 1 of 8)",8802,"NM_007956",13982,"Mm.9213","NM_007956","ENSMUSG00000019768","Esr1","ER|ER-alpha|ERa|ERalpha|ESR|Estr|Estra|Nr3a1","estrogen receptor 1 (alpha)","protein-coding"]
[1312,"chr18",50029967,50032336,"+",0,"NA","intron (NM_001177759, intron 1 of 1)","intron (NM_001177759, intron 1 of 1)",-22131,"NM_134131",106869,"Mm.27740","NM_134131","ENSMUSG00000062210","Tnfaip8","AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2","tumor necrosis factor, alpha-induced protein 8","protein-coding"]
[2395,"chr7",141024864,141025995,"+",0,"NA","Intergenic","Intergenic",-8537,"NM_001033632",213002,"Mm.276440","NM_001033632","ENSMUSG00000059108","Ifitm6","A330075D07|Dspa2f|Fgls5|fragilis5","interferon induced transmembrane protein 6","protein-coding"]
[2365,"chr7",113185986,113186540,"+",0,"NA","Intergenic","Intergenic",-21202,"NM_001243048",11865,"Mm.33970","NM_007489","ENSMUSG00000055116","Arntl","Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b'","aryl hydrocarbon receptor nuclear translocator-like","protein-coding"]
[1021,"chr15",100059402,100061466,"+",0,"NA","intron (NM_001159361, intron 1 of 37)","L1_Mus3|LINE|L1",21770,"NM_001159361",239667,"Mm.243658","NM_172819","ENSMUSG00000023026","Dip2b","4932422C22|AI317237|AI854602|mKIAA1463","DIP2 disco-interacting protein 2 homolog B (Drosophila)","protein-coding"]
[1263,"chr17",87998337,87998888,"+",0,"NA","intron (NM_001081034, intron 14 of 22)","RSINE1|SINE|B4",23562,"NM_010830",17688,"Mm.18210","NM_010830","ENSMUSG00000005370","Msh6","AU044881|AW550279|GTBP|Gtmbp","mutS homolog 6 (E. coli)","protein-coding"]
[934,"chr15",36918553,36919822,"+",0,"NA","Intergenic","L2|LINE|L2",88215,"NM_026521",68036,"Mm.371631","NM_026521","ENSMUSG00000062397","Zfp706","3110006P09Rik|AA793007|AW536850|C77232|Znf706","zinc finger protein 706","protein-coding"]
[1989,"chr5",23386557,23387892,"+",0,"NA","Intergenic","Intergenic",47129,"NR_040469",269630,"Mm.425231","NR_040469","ENSMUSG00000073147","5031425E22Rik","-","RIKEN cDNA 5031425E22 gene","ncRNA"]
[948,"chr15",38951627,38952010,"+",0,"NA","3' UTR (NM_080640, exon 2 of 2)","3' UTR (NM_080640, exon 2 of 2)",17909,"NM_080640",118452,"Mm.233837","NM_080640",null,"Baalc","2810457D07Rik","brain and acute leukemia, cytoplasmic","protein-coding"]
[2160,"chr6",56867618,56867728,"+",0,"NA","intron (NM_012056, intron 6 of 9)","Lx5|LINE|L1",34213,"NM_001252374",107569,"Mm.158936","NM_026004","ENSMUSG00000029780","Nt5c3","1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5c3a|Nt5y|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36","5'-nucleotidase, cytosolic III","protein-coding"]
[572,"chr12",69436060,69437078,"+",0,"NA","Intergenic","Intergenic",38981,"NR_038060",76062,"Mm.380755","NR_038060",null,"5830428M24Rik","100040862|Gm3007","RIKEN cDNA 5830428M24 gene","ncRNA"]
[2450,"chr8",70000967,70001763,"+",0,"NA","Intergenic","Intergenic",-4981,"NM_145596",234366,"Mm.270044","NM_145596","ENSMUSG00000036180","Gatad2a","1110066C11Rik|BC031407|C80248","GATA zinc finger domain containing 2A","protein-coding"]
[1398,"chr19",32263340,32263860,"+",0,"NA","intron (NM_001168525, intron 2 of 9)","RLTR21|LTR|ERVK",-52587,"NM_001168526",208449,"Mm.329810","NM_144792","ENSMUSG00000040451","Sgms1","9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23","sphingomyelin synthase 1","protein-coding"]
[226,"chr10",18349860,18350048,"+",0,"NA","Intergenic","Intergenic",-57721,"NM_173390",215819,"Mm.297971","NM_173390","ENSMUSG00000039835","Nhsl1","5730409E15Rik|A630035H13Rik|A730096F01|BC013565|D10Bwg0940e|mKIAA1357","NHS-like 1","protein-coding"]
[527,"chr11",119895120,119895589,"+",0,"NA","intron (NM_028898, intron 31 of 33)","intron (NM_028898, intron 31 of 33)",13065,"NR_039557",100628577,null,"NR_039557","ENSMUSG00000093061","Mir5098","mmu-mir-5098|mu-mir-5098","microRNA 5098","ncRNA"]
[1430,"chr19",55256751,55260073,"+",0,"NA","intron (NM_027976, intron 1 of 21)","intron (NM_027976, intron 1 of 21)",5043,"NM_027976",433256,"Mm.292056","NM_027976","ENSMUSG00000024981","Acsl5","1700030F05Rik|ACS2|ACS5|Facl5","acyl-CoA synthetase long-chain family member 5","protein-coding"]
[1145,"chr16",95668089,95669274,"+",0,"NA","Intergenic","Intergenic",-33726,"NM_011809",23872,"Mm.290207","NM_011809","ENSMUSG00000022895","Ets2","AU022856|Ets-2","E26 avian leukemia oncogene 2, 3' domain","protein-coding"]
[1870,"chr4",62732731,62732856,"+",0,"NA","Intergenic","Intergenic",58819,"NM_001310706",50780,"Mm.286753","NM_019492","ENSMUSG00000059810","Rgs3","4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S","regulator of G-protein signaling 3","protein-coding"]
[2549,"chr9",21250302,21251000,"+",0,"NA","Intergenic","Intergenic",-2208,"NM_053190",94226,"Mm.190619","NM_053190","ENSMUSG00000045087","S1pr5","Edg8|S1P5|lpB4","sphingosine-1-phosphate receptor 5","protein-coding"]
[1448,"chr2",9749803,9750186,"+",0,"NA","Intergenic","Intergenic",128606,"NM_008091",14462,"Mm.313866","NM_008091","ENSMUSG00000015619","Gata3","Gata-3|jal","GATA binding protein 3","protein-coding"]
[2466,"chr8",84191390,84193534,"+",0,"NA","Intergenic","Intergenic",-13501,"NR_029821",723819,null,"NR_029821","ENSMUSG00000065483","Mir181c","Mirn181c|mir-181c","microRNA 181c","ncRNA"]
[62,"chr1",77464185,77467513,"+",0,"NA","intron (NM_007936, intron 3 of 17)","intron (NM_007936, intron 3 of 17)",30919,"NR_105770",102465180,null,"NR_105770","ENSMUSG00000099141","Mir6352","Gm27481|mmu-mir-6352","microRNA 6352","ncRNA"]
[833,"chr14",25527691,25527895,"+",0,"NA","intron (NM_001310666, intron 2 of 23)","intron (NM_001310666, intron 2 of 23)",-6646,"NR_037236",100526533,null,"NR_037236","ENSMUSG00000093081","Mir3075","mir-3075|mmu-mir-3075","microRNA 3075","ncRNA"]
[1472,"chr2",25534481,25535053,"+",0,"NA","intron (NM_009422, intron 4 of 10)","intron (NM_009422, intron 4 of 10)",12173,"NM_001290413",22030,"Mm.3399","NM_009422","ENSMUSG00000026942","Traf2","AI325259","TNF receptor-associated factor 2","protein-coding"]
[1573,"chr2",105372117,105376468,"+",0,"NA","intron (NM_001159638, intron 2 of 2)","intron (NM_001159638, intron 2 of 2)",25027,"NM_009037",19672,"Mm.4876","NM_009037","ENSMUSG00000005973","Rcn1","Rcn","reticulocalbin 1","protein-coding"]
[548,"chr12",24551436,24552179,"+",0,"NA","intron (NM_020614, intron 12 of 14)","intron (NM_020614, intron 12 of 14)",-20480,"NM_001161406",195733,"Mm.263068","NM_145890","ENSMUSG00000020656","Grhl1","LBP-32|MGR|Tcfcp2l2","grainyhead-like 1 (Drosophila)","protein-coding"]
[2020,"chr5",57943493,57944206,"+",0,"NA","intron (NM_001310608, intron 3 of 3)","intron (NM_001310608, intron 3 of 3)",225768,"NM_018764",54216,"Mm.332387","NM_018764","ENSMUSG00000029108","Pcdh7","-","protocadherin 7","protein-coding"]
[2575,"chr9",43321772,43323623,"+",0,"NA","intron (NM_023655, intron 4 of 8)","intron (NM_023655, intron 4 of 8)",11934,"NM_023655",72169,"Mm.273277","NM_023655","ENSMUSG00000032013","Trim29","1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726","tripartite motif-containing 29","protein-coding"]
[1110,"chr16",55731503,55732136,"+",0,"NA","Intergenic","Intergenic",90319,"NM_001159394",80859,"Mm.247272","NM_030612","ENSMUSG00000035356","Nfkbiz","AA408868|INAP|Mail","nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta","protein-coding"]
[2622,"chr9",70260874,70261618,"+",0,"NA","intron (NM_181072, intron 1 of 27)","intron (NM_181072, intron 1 of 27)",53896,"NM_181072",71602,"Mm.249311","NM_181072","ENSMUSG00000032220","Myo1e","2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3","myosin IE","protein-coding"]
[2204,"chr6",114931792,114932189,"+",0,"NA","Intergenic","Intergenic",-10238,"NM_177683",232334,"Mm.268357","NM_177683",null,"Vgll4","BC048841|VGL-4","vestigial like 4 (Drosophila)","protein-coding"]
[1999,"chr5",32198948,32199571,"+",0,"NA","Intergenic","Intergenic",-33449,"NM_030072",665270,"Mm.160067","NM_030072","ENSMUSG00000029134","Plb1","4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606","phospholipase B1","protein-coding"]
[1772,"chr3",106493444,106494434,"+",0,"NA","intron (NM_001278941, intron 8 of 12)","intron (NM_001278941, intron 8 of 12)",7899,"NM_028110",72121,"Mm.14816","NM_028110","ENSMUSG00000027901","Dennd2d","2010308M01Rik|AI451421","DENN/MADD domain containing 2D","protein-coding"]
[418,"chr11",70585783,70586232,"+",0,"NA","intron (NM_176893, intron 1 of 31)","intron (NM_176893, intron 1 of 31)",23126,"NM_016713",50932,"Mm.42967","NM_016713","ENSMUSG00000020827","Mink1","B55|MINK|Map4k6|Ysk2","misshapen-like kinase 1 (zebrafish)","protein-coding"]
[2324,"chr7",75610154,75610770,"+",0,"NA","exon (NM_029332, exon 7 of 37)","exon (NM_029332, exon 7 of 37)",154928,"NM_029332",75547,"Mm.216107","NM_029332","ENSMUSG00000066406","Akap13","1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC","A kinase (PRKA) anchor protein 13","protein-coding"]
[933,"chr15",36917613,36917767,"+",0,"NA","Intergenic","B3|SINE|B2",89712,"NM_026521",68036,"Mm.371631","NM_026521","ENSMUSG00000062397","Zfp706","3110006P09Rik|AA793007|AW536850|C77232|Znf706","zinc finger protein 706","protein-coding"]
[783,"chr13",81685195,81686035,"+",0,"NA","intron (NM_001081176, intron 5 of 7)","intron (NM_001081176, intron 5 of 7)",25398,"NM_001081176",67486,"Mm.279781","NM_001081176","ENSMUSG00000035834","Polr3g","2310047G20Rik|AV275904|RPC32|RPC7","polymerase (RNA) III (DNA directed) polypeptide G","protein-coding"]
[2217,"chr6",121204672,121205361,"+",0,"NA","Intergenic","B1_Mur3|SINE|Alu",-5718,"NM_017379",53857,"Mm.32884","NM_017379",null,"Tuba8","-","tubulin, alpha 8","protein-coding"]
[1357,"chr19",5257023,5257138,"+",0,"NA","intron (NM_153129, intron 1 of 23)","intron (NM_153129, intron 1 of 23)",16039,"NM_153129",107975,"Mm.234923","NM_153129","ENSMUSG00000024855","Pacs1","AI325977","phosphofurin acidic cluster sorting protein 1","protein-coding"]
[2333,"chr7",80789467,80789901,"+",0,"NA","intron (NM_016721, intron 2 of 37)","intron (NM_016721, intron 2 of 37)",13647,"NM_016721",29875,"Mm.207619","NM_016721","ENSMUSG00000030536","Iqgap1","AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051","IQ motif containing GTPase activating protein 1","protein-coding"]
[348,"chr11",9052324,9052486,"+",0,"NA","intron (NM_001037928, intron 1 of 6)","intron (NM_001037928, intron 1 of 6)",-3414,"NM_177576",194974,"Mm.79210","NM_177576","ENSMUSG00000040985","Sun3","Sunc1","Sad1 and UNC84 domain containing 3","protein-coding"]
[1152,"chr16",95857031,95857536,"+",0,"NA","intron (NR_040484, intron 1 of 3)","intron (NR_040484, intron 1 of 3)",41430,"NR_040485",69776,"Mm.120470","NR_040484","ENSMUSG00000086899","1600002D24Rik","-","RIKEN cDNA 1600002D24 gene","ncRNA"]
[789,"chr13",96510976,96511787,"+",0,"NA","intron (NM_012048, intron 3 of 14)","MIRc|SINE|MIR",31104,"NM_012048",27015,"Mm.89926","NM_012048","ENSMUSG00000021668","Polk","Dinb1","polymerase (DNA directed), kappa","protein-coding"]
[49,"chr1",71412755,71412999,"+",0,"NA","intron (NM_175210, intron 1 of 52)","intron (NM_175210, intron 1 of 52)",2033,"NM_175210",74591,"Mm.159251","NM_175210","ENSMUSG00000050296","Abca12","4832428G11Rik|4833417A11Rik","ATP-binding cassette, sub-family A (ABC1), member 12","protein-coding"]
[2046,"chr5",92488656,92489179,"+",0,"NA","intron (NM_007644, intron 1 of 11)","intron (NM_007644, intron 1 of 11)",16740,"NM_007644",12492,"Mm.297964","NM_007644",null,"Scarb2","9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2|MLGP85","scavenger receptor class B, member 2","protein-coding"]
[2052,"chr5",103367682,103368127,"+",0,"NA","Intergenic","Intergenic",-57288,"NM_011204",19249,"Mm.3414","NM_011204","ENSMUSG00000034573","Ptpn13","AI324989|PTP-BL|PTPL1|Ptpri|RIP","protein tyrosine phosphatase, non-receptor type 13","protein-coding"]
[993,"chr15",83565160,83566313,"+",0,"NA","intron (NM_009775, intron 1 of 3)","intron (NM_009775, intron 1 of 3)",2163,"NM_009775",12257,"Mm.1508","NM_009775","ENSMUSG00000041736","Tspo","Bzrp|IBP|PBR|Tspo1","translocator protein","protein-coding"]
[627,"chr12",81842676,81842797,"+",0,"NA","Intergenic","Intergenic",-17294,"NM_018814",54604,"Mm.86584","NM_018814","ENSMUSG00000021140","Pcnx","2900024E21Rik|3526401J03Rik|AF096286|AI327143|AI413187|Pcnxl1","pecanex homolog (Drosophila)","protein-coding"]
[1090,"chr16",29512159,29512468,"+",0,"NA","intron (NM_172613, intron 1 of 29)","L1MD1|LINE|L1",29170,"NM_172613",224079,"Mm.54954","NM_172613","ENSMUSG00000038094","Atp13a4","4631413J11Rik|4832416L12|9330174J19Rik","ATPase type 13A4","protein-coding"]
[1308,"chr18",44633003,44633610,"+",0,"NA","intron (NM_001085373, intron 3 of 18)","B1_Mur4|SINE|Alu",-28359,"NR_026853",626275,"Mm.427116","NR_026853","ENSMUSG00000097610","A930012L18Rik","-","RIKEN cDNA A930012L18 gene","ncRNA"]
[2117,"chr6",17109006,17109260,"+",0,"NA","Intergenic","RMER1B|Other|Other",43984,"NM_207176",21753,"Mm.436548","NM_011570","ENSMUSG00000029552","Tes","D6Ertd352e|TESS|Tes1|Tes2|testin2","testis derived transcript","protein-coding"]
[715,"chr13",38164301,38164829,"+",0,"NA","intron (NM_023842, intron 1 of 23)","L1MC4|LINE|L1",13271,"NM_023842",109620,"Mm.355327","NM_023842","ENSMUSG00000054889","Dsp","2300002E22Rik|5730453H04Rik|AA407887|AA407888|AW109828|DP|rul","desmoplakin","protein-coding"]
[1934,"chr4",133377494,133378296,"+",0,"NA","intron (NM_016981, intron 1 of 11)","intron (NM_016981, intron 1 of 11)",8119,"NR_039582",100628620,null,"NR_039582","ENSMUSG00000092745","Mir5122","mmu-mir-5122|mu-mir-5122","microRNA 5122","ncRNA"]
[2503,"chr8",106647082,106647448,"+",0,"NA","intron (NM_009864, intron 2 of 15)","B4|SINE|B4",-35803,"NM_173037",272538,"Mm.87151","NM_173037","ENSMUSG00000041949","Tango6","AW413431|E330010G16|Tmco7","transport and golgi organization 6","protein-coding"]
[2201,"chr6",113481003,113481510,"+",0,"NA","intron (NM_134159, intron 15 of 16)","intron (NM_134159, intron 15 of 16)",-2313,"NM_133930",171508,"Mm.41593","NM_133930","ENSMUSG00000030284","Creld1","AI843811","cysteine-rich with EGF-like domains 1","protein-coding"]
[1916,"chr4",128735768,128736105,"+",0,"NA","intron (NM_001195083, intron 1 of 6)","intron (NM_001195083, intron 1 of 6)",8365,"NM_001195083",54383,"Mm.473738","NM_018774","ENSMUSG00000028796","Phc2","A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36","polyhomeotic-like 2 (Drosophila)","protein-coding"]
[23,"chr1",40341241,40341401,"+",0,"NA","intron (NM_133193, intron 4 of 10)","(CA)n|Simple_repeat|Simple_repeat",16694,"NM_133193",107527,"Mm.155583","NM_133193","ENSMUSG00000070942","Il1rl2","AI481289|AW551444|IL-1Rrp2","interleukin 1 receptor-like 2","protein-coding"]
[1722,"chr3",88508576,88509838,"+",0,"NA","Intergenic","B1_Mm|SINE|Alu",-5855,"NM_001002011",16905,"Mm.243014","NM_019390","ENSMUSG00000028063","Lmna","Dhe","lamin A","protein-coding"]
[388,"chr11",55453444,55454593,"+",0,"NA","intron (NM_009720, intron 2 of 3)","PB1D7|SINE|Alu",7120,"NM_009720",11927,"Mm.217759","NM_009720","ENSMUSG00000018585","Atox1","AI256639|Atx1","ATX1 (antioxidant protein 1) homolog 1 (yeast)","protein-coding"]
[364,"chr11",30158409,30159044,"+",0,"NA","intron (NM_175836, intron 2 of 34)","intron (NM_175836, intron 2 of 34)",39531,"NM_009260",20742,"Mm.123110","NM_009260","ENSMUSG00000020315","Sptbn1","9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049","spectrin beta, non-erythrocytic 1","protein-coding"]
[1425,"chr19",47697582,47702144,"+",0,"NA","Intergenic","LTR48B|LTR|ERV1",-7821,"NM_001290825",12821,"Mm.1225","NM_007732","ENSMUSG00000025064","Col17a1","BP180|Bpag|Bpag2","collagen, type XVII, alpha 1","protein-coding"]
[950,"chr15",55245408,55245567,"+",0,"NA","intron (NM_145470, intron 8 of 8)","ID_B1|SINE|B4",-62263,"NM_181277",12818,"Mm.297859","NM_181277","ENSMUSG00000022371","Col14a1","5730412L22Rik|AW108078","collagen, type XIV, alpha 1","protein-coding"]
[2680,"chr9",101265513,101266264,"+",0,"NA","Intergenic","Intergenic",-14056,"NM_001161362",235542,"Mm.335386","NM_172144","ENSMUSG00000043154","Ppp2r3a","3222402P14Rik|A730042E07","protein phosphatase 2, regulatory subunit B'', alpha","protein-coding"]
[1445,"chr2",9486436,9487245,"+",0,"NA","Intergenic","Intergenic",297325,"NR_038180",73438,"Mm.23558","NR_038180","ENSMUSG00000085580","1700061F12Rik","-","RIKEN cDNA 1700061F12 gene","ncRNA"]
[1678,"chr3",36468896,36469665,"+",0,"NA","intron (NM_009673, intron 2 of 12)","MTB_Mm|LTR|ERVL-MaLR",6244,"NR_105976",102466786,null,"NR_105976","ENSMUSG00000098808","Mir7009","Gm27472|mmu-mir-7009","microRNA 7009","ncRNA"]
[1845,"chr4",44234424,44234717,"+",0,"NA","Intergenic","Intergenic",-13303,"NR_039565",100628618,null,"NR_039565","ENSMUSG00000092677","Mir5106","mir-5106|mmu-mir-5106|mu-mir-5106","microRNA 5106","ncRNA"]
[1025,"chr15",100443275,100443385,"+",0,"NA","Intergenic","Intergenic",20137,"NR_040351",432982,"Mm.234608","NM_001034883","ENSMUSG00000087444","Gm5475","EG432982","predicted gene 5475","ncRNA"]
[1992,"chr5",23406752,23408280,"+",0,"NA","Intergenic","B3A|SINE|B2",26837,"NR_040469",269630,"Mm.425231","NR_040469","ENSMUSG00000073147","5031425E22Rik","-","RIKEN cDNA 5031425E22 gene","ncRNA"]
[2478,"chr8",91530358,91530486,"+",0,"NA","intron (NM_011936, intron 8 of 8)","MIR|SINE|MIR",216897,"NM_011936",26383,"Mm.4375","NM_011936","ENSMUSG00000055932","Fto","AW743446|mKIAA1752","fat mass and obesity associated","protein-coding"]
[1842,"chr4",41056295,41057415,"+",0,"NA","Intergenic","Intergenic",-8719,"NM_007473",11832,"Mm.8728","NM_007473","ENSMUSG00000028427","Aqp7","AQP7L|AQPap","aquaporin 7","protein-coding"]
[1466,"chr2",24367821,24368313,"+",0,"NA","Intergenic","Intergenic",-17330,"NM_177611",215632,"Mm.490434","NM_177611","ENSMUSG00000026979","Psd4","BC046518|EFA6B","pleckstrin and Sec7 domain containing 4","protein-coding"]
[485,"chr11",100305853,100305989,"+",0,"NA","Intergenic","PB1D10|SINE|Alu",-14075,"NM_011508",20918,"Mm.13886","NM_011508","ENSMUSG00000035530","Eif1","Sui1-rs1","eukaryotic translation initiation factor 1","protein-coding"]
[2340,"chr7",89541487,89541803,"+",0,"NA","Intergenic","Intergenic",-24059,"NM_029614",76453,"Mm.250438","NM_029614","ENSMUSG00000039405","Prss23","2310046G15Rik|4930479H08Rik|AI790574|Spuve","protease, serine 23","protein-coding"]
[2143,"chr6",42382857,42382982,"+",0,"NA","Intergenic","Intergenic",-9651,"NM_023580",13835,"Mm.133330","NM_023580","ENSMUSG00000029859","Epha1","5730453L17Rik|AL033318|Eph|Esk","Eph receptor A1","protein-coding"]
[778,"chr13",76101826,76101971,"+",0,"NA","intron (NM_001081352, intron 2 of 43)","MLT1A|LTR|ERVL-MaLR",3164,"NM_001081352",218343,"Mm.277964","NM_001081352","ENSMUSG00000033991","Ttc37","mKIAA0372","tetratricopeptide repeat domain 37","protein-coding"]
[720,"chr13",39949796,39950685,"+",0,"NA","Intergenic","Intergenic",337771,"NM_172143",218165,"Mm.364096","NM_172143","ENSMUSG00000047094","Ofcc1","opo","orofacial cleft 1 candidate 1","protein-coding"]
[1270,"chr18",5414751,5414899,"+",0,"NA","Intergenic","Intergenic",-80386,"NM_178722",240186,"Mm.118257","NM_178722","ENSMUSG00000050945","Zfp438","9430031G09|9430091M14Rik|B830013J05Rik","zinc finger protein 438","protein-coding"]
[2449,"chr8",69849438,69849588,"+",0,"NA","intron (NM_001024954, intron 1 of 7)","B3|SINE|B2",16809,"NM_001024954",80720,"Mm.210823","NM_030555","ENSMUSG00000031860","Pbx4","2410015M21Rik|AI429113|AW045266","pre B cell leukemia homeobox 4","protein-coding"]
[460,"chr11",97289327,97290251,"+",0,"NA","Intergenic","(TC)n|Simple_repeat|Simple_repeat",-9213,"NM_008942",19155,"Mm.29824","NM_008942","ENSMUSG00000001441","Npepps","AAP-S|MP100|Psa|R74825|goku","aminopeptidase puromycin sensitive","protein-coding"]
[1645,"chr2",164521258,164523850,"+",0,"NA","Intergenic","B1F2|SINE|Alu",25029,"NM_133779",78928,"Mm.28228","NM_133779","ENSMUSG00000017721","Pigt","2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7","phosphatidylinositol glycan anchor biosynthesis, class T","protein-coding"]
[324,"chr10",111672376,111672736,"+",0,"NA","Intergenic","MLT1A0|LTR|ERVL-MaLR",-78283,"NR_045344",71321,"Mm.410785","NR_045344","ENSMUSG00000097082","4933440J02Rik","-","RIKEN cDNA 4933440J02 gene","ncRNA"]
[1389,"chr19",25266757,25267019,"+",0,"NA","intron (NM_181404, intron 1 of 13)","MIRc|SINE|MIR",29686,"NM_181404",107351,"Mm.260722","NM_181404","ENSMUSG00000032702","Kank1","A930031B09Rik|AU015049|AW121052|Ankrd15|D330024H06Rik|mKIAA0172","KN motif and ankyrin repeat domains 1","protein-coding"]
[244,"chr10",37336215,37338479,"+",0,"NA","Intergenic","Intergenic",-198421,"NM_008538",17118,"Mm.30059","NM_008538","ENSMUSG00000069662","Marcks","Macs|PKCSL","myristoylated alanine rich protein kinase C substrate","protein-coding"]
[637,"chr12",86832868,86833713,"+",0,"NA","Intergenic","MIR3|SINE|MIR",51524,"NM_145836",238330,"Mm.248358","NM_145836","ENSMUSG00000034168","Irf2bpl","6430527G18Rik|Eap1","interferon regulatory factor 2 binding protein-like","protein-coding"]
[2066,"chr5",116417299,116417637,"+",0,"NA","intron (NM_030704, intron 1 of 2)","intron (NM_030704, intron 1 of 2)",5396,"NM_030704",80888,"Mm.21549","NM_030704","ENSMUSG00000041548","Hspb8","AU018630|AW413033|Cryac|D5Ucla4|E2IG1|H11|H11K|HSP20-like|HSP22","heat shock protein 8","protein-coding"]
[2679,"chr9",100818692,100819349,"+",0,"NA","intron (NM_009282, intron 9 of 33)","Lx8|LINE|L1",175397,"NM_009282",20842,"Mm.42135","NM_009282","ENSMUSG00000037286","Stag1","AU045003|SA-1|Scc3","stromal antigen 1","protein-coding"]
[752,"chr13",56429689,56430590,"+",0,"NA","Intergenic","Intergenic",-8216,"NM_177809",328258,"Mm.482177","NM_177809",null,"Slc25a48","AU042651|E230025K15","solute carrier family 25, member 48","protein-coding"]
[1232,"chr17",70738790,70739859,"+",0,"NA","intron (NM_001128181, intron 5 of 9)","intron (NM_001128181, intron 5 of 9)",107453,"NM_001164077",21815,"Mm.101034","NM_009372","ENSMUSG00000047407","Tgif1","AA959811|AI462167|Tgif","TGFB-induced factor homeobox 1","protein-coding"]
[379,"chr11",52070688,52070925,"+",0,"NA","intron (NM_001166654, intron 13 of 13)","L1M2a1|LINE|L1",-28018,"NM_019411",19052,"Mm.260288","NM_019411",null,"Ppp2ca","PP2A|R75353","protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform","protein-coding"]
[1607,"chr2",140790869,140791010,"+",0,"NA","intron (NM_001013802, intron 3 of 18)","intron (NM_001013802, intron 3 of 18)",-119463,"NM_178382",71436,"Mm.426781","NM_178382","ENSMUSG00000051379","Flrt3","5530600M07Rik|C430047I10Rik|mKIAA1469","fibronectin leucine rich transmembrane protein 3","protein-coding"]
[1386,"chr19",23134321,23135268,"+",0,"NA","Intergenic","Intergenic",-6432,"NM_010638",16601,"Mm.291595","NM_010638","ENSMUSG00000033863","Klf9","2310051E17Rik|AA589643|BTEB-1|Bteb1|ENSMUSG00000055440|Gm9971","Kruppel-like factor 9","protein-coding"]
[1536,"chr2",72366205,72366966,"+",0,"NA","intron (NM_178084, intron 4 of 9)","intron (NM_178084, intron 4 of 9)",80884,"NM_178084",65964,"Mm.304143","NM_023057","ENSMUSG00000004085","Zak","AV006891|B230120H23Rik|MLTK|MLTKalpha|MLTKbeta","sterile alpha motif and leucine zipper containing kinase AZK","protein-coding"]
[1639,"chr2",163413660,163413859,"+",0,"NA","intron (NM_025699, intron 2 of 3)","intron (NM_025699, intron 2 of 3)",5711,"NM_025699",66680,"Mm.25119","NM_025699","ENSMUSG00000035399","Oser1","3230401D17Rik|AI256769|Perit1","oxidative stress responsive serine rich 1","protein-coding"]
[1035,"chr16",4469194,4470171,"+",0,"NA","Intergenic","Intergenic",-49184,"NM_009624",11515,"Mm.439750","NM_009624",null,"Adcy9","AC9|ACtp10|AW125421|D16Wsu65e|mKIAA0520","adenylate cyclase 9","protein-coding"]
[2617,"chr9",69466941,69468593,"+",0,"NA","intron (NM_007585, intron 3 of 12)","intron (NM_007585, intron 3 of 12)",10823,"NR_037296",100526560,null,"NR_037296","ENSMUSG00000093042","Mir3109","mir-3109|mmu-mir-3109","microRNA 3109","ncRNA"]
[452,"chr11",95403206,95403336,"+",0,"NA","Intergenic","Intergenic",-10812,"NM_025287",20747,"Mm.285454","NM_025287","ENSMUSG00000057522","Spop","AI315626|Pcif1|TEF2","speckle-type POZ protein","protein-coding"]
[579,"chr12",69572567,69572839,"+",0,"NA","Intergenic","Intergenic",10325,"NM_001033236",207965,"Mm.102487","NM_001033236","ENSMUSG00000049882","Vcpkmt","Gm71|Mettl21d|Mettl221d|VCP-KMT","valosin containing protein lysine (K) methyltransferase","protein-coding"]
[295,"chr10",81129209,81129437,"+",0,"NA","Intergenic","Intergenic",-6948,"NM_010731",16969,"Mm.20920","NM_010731","ENSMUSG00000035011","Zbtb7a","9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7","zinc finger and BTB domain containing 7a","protein-coding"]
[1894,"chr4",112008688,112009517,"+",0,"NA","intron (NM_001102662, intron 1 of 7)","ORR1F-int|LTR|ERVL-MaLR",2833,"NM_001102662",639781,"Mm.398873","NM_001102662","ENSMUSG00000089773","Skint1","OTTMUSG00000008542|Skint-1","selection and upkeep of intraepithelial T cells 1","protein-coding"]
[535,"chr11",121776772,121777399,"+",0,"NA","Intergenic","Intergenic",-53133,"NM_029049",74675,"Mm.61213","NM_029049","ENSMUSG00000039198","Ptchd3","4930451E13Rik|4933440L20Rik|RNDEu-3","patched domain containing 3","protein-coding"]
[1618,"chr2",148507369,148507618,"+",0,"NA","Intergenic","Lx8|LINE|L1",-63958,"NM_010740",17064,"Mm.681","NM_010740","ENSMUSG00000027435","Cd93","6030404G09Rik|AA145088|AA4.1|AW555904|C1qr1|C1qrp|Ly68","CD93 antigen","protein-coding"]
[77,"chr1",91095662,91095992,"+",0,"NA","intron (NM_001310732, intron 12 of 24)","intron (NM_001310732, intron 12 of 24)",42383,"NM_008515",16978,"Mm.45039","NM_008515","ENSMUSG00000026305","Lrrfip1","AU024550|Fliiap1","leucine rich repeat (in FLII) interacting protein 1","protein-coding"]
[683,"chr13",6027540,6030240,"+",0,"NA","Intergenic","Intergenic",167401,"NM_011803",23849,"Mm.275036","NM_011803","ENSMUSG00000000078","Klf6","AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9","Kruppel-like factor 6","protein-coding"]
[2260,"chr7",18215068,18216132,"+",0,"NA","Intergenic","Intergenic",-29747,"NM_153749",266815,"Mm.106769","NM_153749","ENSMUSG00000054005","Mill1","5530400I18Rik","MHC I like leukocyte 1","protein-coding"]
[541,"chr12",8782423,8785025,"+",0,"NA","intron (NM_011519, intron 1 of 4)","intron (NM_011519, intron 1 of 4)",12328,"NM_011519",20969,"Mm.2580","NM_011519","ENSMUSG00000020592","Sdc1","AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1","syndecan 1","protein-coding"]
[1215,"chr17",42927057,42927314,"+",0,"NA","Intergenic","MTD|LTR|ERVL-MaLR",-50761,"NM_009847",12488,"Mm.218637","NM_009847","ENSMUSG00000061665","Cd2ap","AL024079|C78928|METS-1|Mets1","CD2-associated protein","protein-coding"]
[1712,"chr3",85879588,85881316,"+",0,"NA","intron (NM_177130, intron 1 of 1)","intron (NM_177130, intron 1 of 1)",7066,"NM_177130",320302,"Mm.482978","NM_177130","ENSMUSG00000031286","Glt28d2","4732486J07Rik|Glt28d1l","glycosyltransferase 28 domain containing 2","protein-coding"]
[2344,"chr7",96521859,96523304,"+",0,"NA","intron (NM_001310762, intron 4 of 32)","intron (NM_001310762, intron 4 of 32)",-180617,"NR_046043",670727,"Mm.421352","NR_046043","ENSMUSG00000085751","Gm15412","OTTMUSG00000021245","predicted gene 15412","ncRNA"]
[765,"chr13",63242159,63245238,"+",0,"NA","intron (NM_001289924, intron 13 of 16)","intron (NM_001289924, intron 13 of 16)",3669,"NR_110521",72061,"Mm.188105","NM_028079","ENSMUSG00000021458","2010111I01Rik","2300006M17Rik|AP-O|Aopep|mir-23b|mir-24-1|mir-27b","RIKEN cDNA 2010111I01 gene","protein-coding"]
[2552,"chr9",21924452,21924825,"+",0,"NA","intron (NR_045606, intron 3 of 4)","B3A|SINE|B2",2650,"NM_001253869",235043,"Mm.253329","NM_178577","ENSMUSG00000040883","Tmem205","-","transmembrane protein 205","protein-coding"]
[2521,"chr8",123019588,123023428,"+",0,"NA","intron (NR_037865, intron 1 of 13)","intron (NR_037865, intron 1 of 13)",20776,"NR_037865",77087,"Mm.31567","NM_001081379","ENSMUSG00000035569","Ankrd11","2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod","ankyrin repeat domain 11","protein-coding"]
[897,"chr14",103532060,103533415,"+",0,"NA","intron (NM_022886, intron 3 of 30)","intron (NM_022886, intron 3 of 30)",19396,"NM_022886",64929,"Mm.244003","NM_022886","ENSMUSG00000022123","Scel","9230114I02Rik","sciellin","protein-coding"]
[312,"chr10",96627428,96629835,"+",0,"NA","Intergenic","Intergenic",11630,"NM_007569",12226,"Mm.23811","NM_007569","ENSMUSG00000036478","Btg1","AI426953|AW546738","B cell translocation gene 1, anti-proliferative","protein-coding"]
[1628,"chr2",155331208,155331754,"+",0,"NA","intron (NM_001004721, intron 4 of 11)","intron (NM_001004721, intron 4 of 11)",-25336,"NR_030475",735287,null,"NR_030475","ENSMUSG00000076216","Mir695","Mirn695|mmu-mir-695","microRNA 695","ncRNA"]
[2435,"chr8",46446649,46447220,"+",0,"NA","Intergenic","Intergenic",-24103,"NM_007981",14081,"Mm.210323","NM_007981","ENSMUSG00000018796","Acsl1","Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1","acyl-CoA synthetase long-chain family member 1","protein-coding"]
[1002,"chr15",95826433,95826631,"+",0,"NA","intron (NM_175344, intron 1 of 19)","intron (NM_175344, intron 1 of 19)",35689,"NM_001253813",105722,"Mm.38087","NM_175344","ENSMUSG00000064210","Ano6","2900059G15Rik|AA407480|AW554778|F730003B03Rik|Tmem16f","anoctamin 6","protein-coding"]
[237,"chr10",20077506,20077650,"+",0,"NA","intron (NM_008580, intron 12 of 29)","intron (NM_008580, intron 12 of 29)",-71342,"NM_008635",17761,"Mm.20928","NM_008635","ENSMUSG00000019996","Map7","E-MAP-115|MAP-7|Mtap7|R75000|mshi|mste|ste","microtubule-associated protein 7","protein-coding"]
[2584,"chr9",44200020,44200748,"+",0,"NA","intron (NM_007619, intron 2 of 15)","intron (NM_007619, intron 2 of 15)",33662,"NM_007619",12402,"Mm.266871","NM_007619","ENSMUSG00000034342","Cbl","4732447J05Rik|Cbl-2|c-Cbl|cbl","Casitas B-lineage lymphoma","protein-coding"]
[370,"chr11",46161243,46161972,"+",0,"NA","intron (NM_172524, intron 2 of 5)","intron (NM_172524, intron 2 of 5)",4752,"NM_172524",214112,"Mm.225253","NM_172524","ENSMUSG00000020411","Nipal4","9530066K23Rik","NIPA-like domain containing 4","protein-coding"]
[2722,"chr9",123110693,123111156,"+",0,"NA","intron (NM_026917, intron 1 of 6)","MIR|SINE|MIR",2281,"NM_026917",69035,"Mm.28300","NM_026917",null,"Zdhhc3","1110020O22Rik|1810006O10Rik|2210017C02Rik|DHHC-3|GODZ|Gramp1|Zfp373","zinc finger, DHHC domain containing 3","protein-coding"]
[2371,"chr7",126627748,126628029,"+",0,"NA","Intergenic","Lx7|LINE|L1",-2418,"NM_019738",56312,"Mm.18742","NM_019738",null,"Nupr1","2310032H04Rik|Com1|p8","nuclear protein transcription regulator 1","protein-coding"]
[2519,"chr8",122956800,122957106,"+",0,"NA","intron (NR_037865, intron 2 of 13)","intron (NR_037865, intron 2 of 13)",85331,"NR_037865",77087,"Mm.31567","NM_001081379","ENSMUSG00000035569","Ankrd11","2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod","ankyrin repeat domain 11","protein-coding"]
[2610,"chr9",66989270,66990615,"+",0,"NA","Intergenic","Intergenic",-14458,"NM_030717",80907,"Mm.157882","NM_030717","ENSMUSG00000032370","Lactb","LACT-1|Lact1|Mrpl56","lactamase, beta","protein-coding"]
[567,"chr12",55348026,55348816,"+",0,"NA","intron (NM_025373, intron 4 of 6)","intron (NM_025373, intron 4 of 6)",-22274,"NR_035430",100316807,null,"NR_035430","ENSMUSG00000080645","Mir1198","Mirn1198|mmu-mir-1198","microRNA 1198","ncRNA"]
[416,"chr11",70576330,70578524,"+",0,"NA","intron (NM_176893, intron 1 of 31)","intron (NM_176893, intron 1 of 31)",14546,"NM_016713",50932,"Mm.42967","NM_016713","ENSMUSG00000020827","Mink1","B55|MINK|Map4k6|Ysk2","misshapen-like kinase 1 (zebrafish)","protein-coding"]
[914,"chr14",120341604,120343087,"+",0,"NA","intron (NM_175341, intron 2 of 8)","intron (NM_175341, intron 2 of 8)",66676,"NM_175341",105559,"Mm.238266","NM_175341","ENSMUSG00000022139","Mbnl2","1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072","muscleblind-like 2","protein-coding"]
[380,"chr11",52075830,52076902,"+",0,"NA","intron (NM_001166654, intron 13 of 13)","intron (NM_001166654, intron 13 of 13)",-22458,"NM_019411",19052,"Mm.260288","NM_019411",null,"Ppp2ca","PP2A|R75353","protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform","protein-coding"]
[100,"chr1",125482578,125482766,"+",0,"NA","Intergenic","B4A|SINE|B4",-46945,"NM_001205386",74117,"Mm.183102","NM_023735","ENSMUSG00000026341","Actr3","1200003A09Rik|Arp3","ARP3 actin-related protein 3","protein-coding"]
[965,"chr15",61297285,61297886,"+",0,"NA","Intergenic","Intergenic",-376315,"NM_001081067",117586,"Mm.291499","NM_001081067","ENSMUSG00000022347","A1bg","C44","alpha-1-B glycoprotein","protein-coding"]
[300,"chr10",85378494,85378713,"+",0,"NA","Intergenic","Intergenic",-8211,"NM_028709",74007,"Mm.36544","NM_028709","ENSMUSG00000020042","Btbd11","6330404E16Rik","BTB (POZ) domain containing 11","protein-coding"]
[1279,"chr18",19958496,19962250,"+",0,"NA","TTS (NM_007882)","TTS (NM_007882)",41724,"NM_007882",13507,"Mm.89935","NM_007882","ENSMUSG00000059898","Dsc3","5430426I24Rik","desmocollin 3","protein-coding"]
[1439,"chr2",6162855,6163548,"+",0,"NA","Intergenic","Intergenic",-30050,"NR_040333",320132,"Mm.445891","NR_040333","ENSMUSG00000087125","A230108P19Rik","-","RIKEN cDNA A230108P19 gene","ncRNA"]
[2079,"chr5",123668598,123668708,"+",0,"NA","intron (NM_019765, intron 1 of 23)","MLT1J1|LTR|ERVL-MaLR",15708,"NM_019765",56430,"Mm.241109","NM_019765","ENSMUSG00000049550","Clip1","1110007I12Rik|4631429H07Rik|AV017631|C81039|CLIP-170|CLIP170|CYLN1|Clip50|Rsn|mKIAA4046|restin","CAP-GLY domain containing linker protein 1","protein-coding"]
[286,"chr10",77381167,77381411,"+",0,"NA","intron (NR_004429, intron 1 of 10)","intron (NR_004429, intron 1 of 10)",36984,"NM_130895",110532,"Mm.276815","NM_130895","ENSMUSG00000020262","Adarb1","1700057H01Rik|AW124433|AW558573|Adar2|BB220382|D10Bwg0447e|Red1","adenosine deaminase, RNA-specific, B1","protein-coding"]
[1395,"chr19",32088439,32088660,"+",0,"NA","intron (NM_018830, intron 2 of 23)","L1_Mur3|LINE|L1",14591,"NM_018830",54447,"Mm.491229","NM_018830","ENSMUSG00000024887","Asah2","AI585898","N-acylsphingosine amidohydrolase 2","protein-coding"]
[2405,"chr7",144971984,144973135,"+",0,"NA","Intergenic","Intergenic",-32634,"NM_007631",12443,"Mm.273049","NM_007631","ENSMUSG00000070348","Ccnd1","AI327039|CycD1|Cyl-1|PRAD1|bcl-1|cD1","cyclin D1","protein-coding"]
[1075,"chr16",25836406,25836626,"+",0,"NA","intron (NM_001127259, intron 4 of 13)","intron (NM_001127259, intron 4 of 13)",34600,"NM_001127264",22061,"Mm.20894","NM_011641","ENSMUSG00000022510","Trp63","AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1","transformation related protein 63","protein-coding"]
[2426,"chr8",26747150,26747279,"+",0,"NA","Intergenic","Intergenic",77209,"NR_045904",72316,"Mm.490534","NR_045904","ENSMUSG00000100335","2310008N11Rik","-","RIKEN cDNA 2310008N11 gene","ncRNA"]
[800,"chr13",102905177,102906949,"+",0,"NA","intron (NM_175171, intron 4 of 28)","intron (NM_175171, intron 4 of 28)",145808,"NR_130171",76624,"Mm.426384","NR_130171","ENSMUSG00000091906","1700099I09Rik","-","RIKEN cDNA 1700099I09 gene","ncRNA"]
[2232,"chr6",129214850,129217164,"+",0,"NA","Intergenic","Intergenic",22038,"NR_040265",76432,"Mm.261738","NR_040265","ENSMUSG00000097354","2310001H17Rik","AI646108","RIKEN cDNA 2310001H17 gene","ncRNA"]
[1365,"chr19",7471945,7472055,"+",0,"NA","intron (NM_001003934, intron 1 of 8)","ID_B1|SINE|B4",-6518,"NR_028566",100216530,"Mm.453052","NR_028566","ENSMUSG00000064899","Snord118","MBI-34","small nucleolar RNA, C/D box 118","snoRNA"]
[2432,"chr8",36186155,36186842,"+",0,"NA","Intergenic","Intergenic",63018,"NM_001081150",244421,"Mm.324032","NM_001081150","ENSMUSG00000039633","Lonrf1","-","LON peptidase N-terminal domain and ring finger 1","protein-coding"]
[1407,"chr19",37100903,37103515,"+",0,"NA","intron (NM_001290829, intron 4 of 9)","B1F1|SINE|Alu",-71634,"NR_045329",319931,"Mm.446730","NR_045329","ENSMUSG00000097591","A330032B11Rik","-","RIKEN cDNA A330032B11 gene","ncRNA"]
[496,"chr11",102466466,102466929,"+",0,"NA","intron (NM_010575, intron 5 of 29)","B1_Mus2|SINE|Alu",3186,"NM_010575",16399,"Mm.26646","NM_010575","ENSMUSG00000034664","Itga2b","AI172977|CD41|CD41B|GpIIb|alphaIIb","integrin alpha 2b","protein-coding"]
[605,"chr12",75730708,75731898,"+",0,"NA","intron (NM_030750, intron 1 of 2)","L1M5|LINE|L1",4426,"NM_030750",81535,"Mm.280199","NM_030750","ENSMUSG00000021054","Sgpp1","AI463453|SPP|SPP1|Spph1","sphingosine-1-phosphate phosphatase 1","protein-coding"]
[1779,"chr3",108790473,108791077,"+",0,"NA","Intergenic","Intergenic",49727,"NM_011504",20912,"Mm.316894","NM_011504","ENSMUSG00000027882","Stxbp3","Munc-18c|Stxbp3a|Sxtbp3|Unc18-3","syntaxin binding protein 3","protein-coding"]
[2581,"chr9",43851076,43851675,"+",0,"NA","Intergenic","L2|LINE|L2",106799,"NM_021424",58235,"Mm.335096","NM_021424","ENSMUSG00000032012","Pvrl1","AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|nectin-1","poliovirus receptor-related 1","protein-coding"]
[1568,"chr2",102980486,102981435,"+",0,"NA","Intergenic","Intergenic",-79295,"NM_001039150",12505,"Mm.423621","NM_009851","ENSMUSG00000005087","Cd44","AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1","CD44 antigen","protein-coding"]
[607,"chr12",75825487,75828837,"+",0,"NA","intron (NM_001005510, intron 1 of 115)","intron (NM_001005510, intron 1 of 115)",8844,"NM_001005510",319565,"Mm.26652","NM_001005510","ENSMUSG00000063450","Syne2","6820443O06Rik|AW546258|D12Ertd777e|NUA|Nesp2g|mKIAA1011","spectrin repeat containing, nuclear envelope 2","protein-coding"]
[1807,"chr3",144088230,144088955,"+",0,"NA","Intergenic","Intergenic",113740,"NM_001161770",16911,"Mm.29187","NM_010723","ENSMUSG00000028266","Lmo4","A730077C12Rik|Crp3|Etohi4","LIM domain only 4","protein-coding"]
[1699,"chr3",60363846,60364058,"+",0,"NA","Intergenic","Intergenic",-108878,"NM_001253713",56758,"Mm.255723","NM_020007","ENSMUSG00000027763","Mbnl1","Mbnl|mKIAA0428","muscleblind-like 1 (Drosophila)","protein-coding"]
[42,"chr1",66846414,66846762,"+",0,"NA","intron (NM_007381, intron 5 of 10)","intron (NM_007381, intron 5 of 10)",16721,"NM_007381",11363,"Mm.2445","NM_007381","ENSMUSG00000026003","Acadl","AA960361|AU018452|C79855|LCAD","acyl-Coenzyme A dehydrogenase, long-chain","protein-coding"]
[759,"chr13",63074161,63074511,"+",0,"NA","intron (NM_001289924, intron 5 of 16)","intron (NM_001289924, intron 5 of 16)",109443,"NM_001289924",72061,"Mm.188105","NM_028079","ENSMUSG00000021458","2010111I01Rik","2300006M17Rik|AP-O|Aopep|mir-23b|mir-24-1|mir-27b","RIKEN cDNA 2010111I01 gene","protein-coding"]
[2508,"chr8",115854103,115854937,"+",0,"NA","Intergenic","Intergenic",-147626,"NM_001025577",17132,"Mm.275549","NM_001025577",null,"Maf","2810401A20Rik|A230108G15Rik|AW047063|c-maf","avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog","protein-coding"]
[1228,"chr17",65720190,65720405,"+",0,"NA","intron (NM_133685, intron 2 of 6)","intron (NM_133685, intron 2 of 6)",52455,"NM_133685",106572,"Mm.29274","NM_133685","ENSMUSG00000056515","Rab31","1700093E07Rik|AI415285|Rab22B","RAB31, member RAS oncogene family","protein-coding"]
[235,"chr10",19058800,19059253,"+",0,"NA","Intergenic","Intergenic",-43616,"NM_009397",21929,"Mm.116683","NM_009397","ENSMUSG00000019850","Tnfaip3","A20|Tnfip3","tumor necrosis factor, alpha-induced protein 3","protein-coding"]
[1073,"chr16",25780300,25780640,"+",0,"NA","intron (NM_001127259, intron 3 of 13)","intron (NM_001127259, intron 3 of 13)",-21446,"NM_001127263",22061,"Mm.20894","NM_011641","ENSMUSG00000022510","Trp63","AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1","transformation related protein 63","protein-coding"]
[2291,"chr7",35080636,35081785,"+",0,"NA","Intergenic","Intergenic",-24644,"NM_009884",12611,"Mm.273090","NM_009884","ENSMUSG00000056216","Cebpg","C/EBP[g]|C/EBPgamma|GPE1-BP|Gpe1bp|Ig/EBP","CCAAT/enhancer binding protein (C/EBP), gamma","protein-coding"]
[2591,"chr9",48793517,48794367,"+",0,"NA","intron (NM_001033324, intron 2 of 6)","intron (NM_001033324, intron 2 of 6)",42003,"NM_001033324",235320,"Mm.457803","NM_001033324","ENSMUSG00000066687","Zbtb16","AI467657|PLZF|Zfp145|lu","zinc finger and BTB domain containing 16","protein-coding"]
[2187,"chr6",97310763,97312620,"+",0,"NA","intron (NM_145148, intron 12 of 23)","intron (NM_145148, intron 12 of 23)",-58911,"NM_001081157",320502,"Mm.68163","NM_001081157","ENSMUSG00000044086","Lmod3","5430424A14Rik","leiomodin 3 (fetal)","protein-coding"]
[1931,"chr4",132455406,132455704,"+",0,"NA","Intergenic","L1M5|LINE|L1",8366,"NM_026039",67219,"Mm.45929","NM_026039","ENSMUSG00000066042","Med18","2810046C01Rik","mediator complex subunit 18","protein-coding"]
[694,"chr13",31914850,31914977,"+",0,"NA","intron (NM_146041, intron 9 of 10)","intron (NM_146041, intron 9 of 10)",108267,"NM_008592",17300,"Mm.12949","NM_008592","ENSMUSG00000050295","Foxc1","FREAC3|Fkh1|Mf1|Mf4|ch|fkh-1|frkhda","forkhead box C1","protein-coding"]
[816,"chr13",114639984,114640153,"+",0,"NA","intron (NR_045976, intron 3 of 6)","ORR1E|LTR|ERVL-MaLR",32840,"NR_045976",75161,"Mm.50406","NM_175218","ENSMUSG00000051758","4930544M13Rik","-","RIKEN cDNA 4930544M13 gene","ncRNA"]
[1103,"chr16",45662216,45662333,"+",0,"NA","exon (NM_172455, exon 15 of 18)","exon (NM_172455, exon 15 of 18)",-8156,"NM_145389",212998,"Mm.97511","NM_145389","ENSMUSG00000033187","BC016579","-","cDNA sequence, BC016579","protein-coding"]
[2244,"chr6",136490324,136490833,"+",0,"NA","Intergenic","RMER17C|LTR|ERVK",-28273,"NM_019426",54343,"Mm.173271","NM_019426","ENSMUSG00000030213","Atf7ip","2610204M12Rik|AM|Mcaf1","activating transcription factor 7 interacting protein","protein-coding"]
[296,"chr10",83984664,83985100,"+",0,"NA","Intergenic","Intergenic",262017,"NM_001145198",69784,"Mm.271188","NM_001145198","ENSMUSG00000087651","1500009L16Rik","2700050C19Rik|OCC-1","RIKEN cDNA 1500009L16 gene","protein-coding"]
[265,"chr10",66911590,66911842,"+",0,"NA","Intergenic","MTD|LTR|ERVL-MaLR",-93359,"NR_110511",102634101,"Mm.445258","NR_110511",null,"Gm31763","-","predicted gene, 31763","ncRNA"]
[1062,"chr16",24012078,24013337,"+",0,"NA","Intergenic","Intergenic",-24095,"NM_009744",12053,"Mm.347398","NM_009744","ENSMUSG00000022508","Bcl6","Bcl5","B cell leukemia/lymphoma 6","protein-coding"]
[171,"chr1",170057873,170058014,"+",0,"NA","intron (NM_022563, intron 1 of 16)","intron (NM_022563, intron 1 of 16)",31001,"NM_022563",18214,"Mm.229249","NM_022563","ENSMUSG00000026674","Ddr2","AW495251|Ntrkr3|tyro10","discoidin domain receptor family, member 2","protein-coding"]
[1700,"chr3",60798353,60798899,"+",0,"NA","Intergenic","Intergenic",-204159,"NM_008772",18441,"Mm.281452","NM_008772","ENSMUSG00000027765","P2ry1","P2Y1","purinergic receptor P2Y, G-protein coupled 1","protein-coding"]
[2609,"chr9",66952125,66952828,"+",0,"NA","Intergenic","Intergenic",6400,"NM_026467",67941,"Mm.30120","NM_026467","ENSMUSG00000036781","Rps27l","1810034D23Rik","ribosomal protein S27-like","protein-coding"]
[445,"chr11",93987315,93989388,"+",0,"NA","Intergenic","B1F|SINE|Alu",-7740,"NM_001199203",70834,"Mm.260737","NM_027569","ENSMUSG00000020859","Spag9","3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1","sperm associated antigen 9","protein-coding"]
[2131,"chr6",30300718,30300940,"+",0,"NA","intron (NM_009459, intron 1 of 6)","intron (NM_009459, intron 1 of 6)",3710,"NM_009459",22214,"Mm.332967","NM_009459","ENSMUSG00000039159","Ube2h","1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8","ubiquitin-conjugating enzyme E2H","protein-coding"]
[2687,"chr9",104360832,104361570,"+",0,"NA","Intergenic","Intergenic",-23479,"NM_207668",56318,"Mm.19941","NM_019807","ENSMUSG00000032561","Acpp","5'-NT|A030005E02Rik|FRAP|Lap|PAP|Ppal","acid phosphatase, prostate","protein-coding"]
[1339,"chr18",67318349,67318641,"+",0,"NA","exon (NM_053261, exon 8 of 8)","exon (NM_053261, exon 8 of 8)",-25069,"NM_007702",12683,"Mm.449","NM_007702","ENSMUSG00000024526","Cidea","AW212747","cell death-inducing DNA fragmentation factor, alpha subunit-like effector A","protein-coding"]
[2338,"chr7",88467415,88468553,"+",0,"NA","intron (NM_028238, intron 2 of 2)","intron (NM_028238, intron 2 of 2)",37711,"NM_028238",72433,"Mm.276669","NM_028238","ENSMUSG00000030559","Rab38","2310011F14Rik|AU043391|cht","RAB38, member RAS oncogene family","protein-coding"]
[2012,"chr5",43691768,43692571,"+",0,"NA","intron (NM_172274, intron 12 of 39)","intron (NM_172274, intron 12 of 39)",29790,"NM_172274",231214,"Mm.44434","NM_172274","ENSMUSG00000039765","Cc2d2a","5730509K17Rik|b2b1035Clo","coiled-coil and C2 domain containing 2A","protein-coding"]
[582,"chr12",70523195,70524444,"+",0,"NA","intron (NR_037248, intron 2 of 4)","intron (NR_037248, intron 2 of 4)",70665,"NM_028339",72736,"Mm.204670","NM_028339","ENSMUSG00000021072","Tmx1","2810425A04Rik|AI465319|Txndc1","thioredoxin-related transmembrane protein 1","protein-coding"]
[1884,"chr4",101202209,101202407,"+",0,"NA","intron (NM_146145, intron 1 of 24)","intron (NM_146145, intron 1 of 24)",62974,"NM_146145",16451,"Mm.289657","NM_146145","ENSMUSG00000028530","Jak1","AA960307|BAP004|C130039L05Rik","Janus kinase 1","protein-coding"]
[2120,"chr6",17193928,17194270,"+",0,"NA","Intergenic","B4A|SINE|B4",-3652,"NR_102305",319682,"Mm.136046","NR_102304","ENSMUSG00000085171","D830026I12Rik","-","RIKEN cDNA D830026I12 gene","ncRNA"]
[1858,"chr4",56495804,56497349,"+",0,"NA","Intergenic","Intergenic",244849,"NM_025271",11471,"Mm.251434","NM_025271","ENSMUSG00000070980","Actl7b","Tact1","actin-like 7b","protein-coding"]
[557,"chr12",39831217,39831362,"+",0,"NA","Intergenic","Intergenic",206087,"NM_007487",11861,"Mm.12723","NM_007487","ENSMUSG00000047446","Arl4a","AI467555|Arl4","ADP-ribosylation factor-like 4A","protein-coding"]
[718,"chr13",39924791,39925699,"+",0,"NA","Intergenic","Intergenic",362766,"NM_172143",218165,"Mm.364096","NM_172143","ENSMUSG00000047094","Ofcc1","opo","orofacial cleft 1 candidate 1","protein-coding"]
[2147,"chr6",47788220,47788966,"+",0,"NA","Intergenic","Intergenic",15059,"NR_030485",735289,null,"NR_030485","ENSMUSG00000076060","Mir704","Mirn704|mir-704|mmu-mir-704","microRNA 704","ncRNA"]
[1581,"chr2",119263396,119265000,"+",0,"NA","Intergenic","Intergenic",7028,"NM_145530",228543,"Mm.120274","NM_145530","ENSMUSG00000034226","Rhov","A030005A06Rik|Arhv","ras homolog gene family, member V","protein-coding"]
[1507,"chr2",35446060,35446697,"+",0,"NA","intron (NM_001308299, intron 1 of 7)","intron (NM_001308299, intron 1 of 7)",15071,"NM_001308299",14594,"Mm.281124","NM_010283","ENSMUSG00000035778","Ggta1","AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT","glycoprotein galactosyltransferase alpha 1, 3","protein-coding"]
[1604,"chr2",139486666,139487097,"+",0,"NA","Intergenic","RMER17A2|LTR|ERVK",-7039,"NM_175467",228677,"Mm.100450","NM_175467","ENSMUSG00000039092","Sptlc3","C130053K05Rik","serine palmitoyltransferase, long chain base subunit 3","protein-coding"]
[2726,"chr9",123202390,123203086,"+",0,"NA","intron (NM_133974, intron 1 of 8)","intron (NM_133974, intron 1 of 8)",13300,"NM_133974",109332,"Mm.27519","NM_133974","ENSMUSG00000035498","Cdcp1","9030022E12Rik|AA409659|E030027H19Rik","CUB domain containing protein 1","protein-coding"]
[441,"chr11",87678166,87678996,"+",0,"NA","intron (NM_172448, intron 2 of 9)","intron (NM_172448, intron 2 of 9)",15494,"NM_172448",207742,"Mm.440230","NM_172448","ENSMUSG00000034177","Rnf43","4732452J19Rik","ring finger protein 43","protein-coding"]
[868,"chr14",73370232,73370709,"+",0,"NA","intron (NM_008410, intron 1 of 5)","intron (NM_008410, intron 1 of 5)",14801,"NM_008410",16432,"Mm.4266","NM_008410","ENSMUSG00000022108","Itm2b","AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2","integral membrane protein 2B","protein-coding"]
[672,"chr13",3821781,3822118,"+",0,"NA","Intergenic","Intergenic",-15808,"NM_020036",80796,"Mm.21075","NM_020036","ENSMUSG00000033765","Calm4","2310037J09Rik|AI649108|DD112|Scarf","calmodulin 4","protein-coding"]
[1140,"chr16",87665008,87666435,"+",0,"NA","Intergenic","Intergenic",-33233,"NM_007520",12013,"Mm.26147","NM_007520","ENSMUSG00000025612","Bach1","6230421P05Rik|AI323795","BTB and CNC homology 1","protein-coding"]
[983,"chr15",79343594,79343834,"+",0,"NA","Intergenic","MLT1B|LTR|ERVL-MaLR",-2907,"NM_001304830",17133,"Mm.86646","NM_010755","ENSMUSG00000042622","Maff","-","v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)","protein-coding"]
[275,"chr10",68157019,68157686,"+",0,"NA","intron (NM_023598, intron 4 of 9)","intron (NM_023598, intron 4 of 9)",121374,"NM_023598",71371,"Mm.440357","NM_023598","ENSMUSG00000019947","Arid5b","4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta","AT rich interactive domain 5B (MRF1-like)","protein-coding"]
[2035,"chr5",64811910,64813127,"+",0,"NA","intron (NM_008453, intron 1 of 5)","intron (NM_008453, intron 1 of 5)",8995,"NM_008453",16599,"Mm.392759","NM_008453","ENSMUSG00000029178","Klf3","9930027G08Rik|AL024007|Bklf|Tef-2","Kruppel-like factor 3 (basic)","protein-coding"]
[197,"chr1",186635058,186635202,"+",0,"NA","intron (NM_009367, intron 2 of 6)","intron (NM_009367, intron 2 of 6)",70862,"NM_009367",21808,"Mm.18213","NM_009367","ENSMUSG00000039239","Tgfb2","BB105277|Tgf-beta2|Tgfb-2","transforming growth factor, beta 2","protein-coding"]
[2208,"chr6",119924687,119924829,"+",0,"NA","3' UTR (NM_001185020, exon 26 of 26)","3' UTR (NM_001185020, exon 26 of 26)",22060,"NM_001166381",19365,"Mm.149","NM_011236","ENSMUSG00000030166","Rad52","Rad52yh","RAD52 homolog (S. cerevisiae)","protein-coding"]
[1731,"chr3",92032942,92035778,"+",0,"NA","Intergenic","Intergenic",19777,"NM_207247",242100,"Mm.297406","NM_207247","ENSMUSG00000042244","Pglyrp3","Gm420","peptidoglycan recognition protein 3","protein-coding"]
[853,"chr14",61559204,61560786,"+",0,"NA","Intergenic","Intergenic",-3109,"NM_001310603",66674,"Mm.282706","NM_025697","ENSMUSG00000021930","Spryd7","6330409N04Rik|Clld6","SPRY domain containing 7","protein-coding"]
[751,"chr13",56426600,56427788,"+",0,"NA","Intergenic","MLT1C|LTR|ERVL-MaLR",-11161,"NM_177809",328258,"Mm.482177","NM_177809",null,"Slc25a48","AU042651|E230025K15","solute carrier family 25, member 48","protein-coding"]
[1500,"chr2",32907188,32907798,"+",0,"NA","intron (NM_146119, intron 2 of 13)","intron (NM_146119, intron 2 of 13)",31359,"NM_146119",227737,"Mm.301646","NM_146119","ENSMUSG00000026796","Fam129b","9130404D14Rik","family with sequence similarity 129, member B","protein-coding"]
[1746,"chr3",95666643,95667979,"+",0,"NA","Intergenic","B1_Mus1|SINE|Alu",8590,"NM_008562",17210,"Mm.1639","NM_008562","ENSMUSG00000038612","Mcl1","AW556805|Mcl-1","myeloid cell leukemia sequence 1","protein-coding"]
[2167,"chr6",67457964,67460607,"+",0,"NA","intron (NM_144548, intron 6 of 10)","MIRc|SINE|MIR",32570,"NM_144548",209590,"Mm.221227","NM_144548","ENSMUSG00000049093","Il23r","IL-23R","interleukin 23 receptor","protein-coding"]
[2136,"chr6",37143434,37143715,"+",0,"NA","intron (NM_001081206, intron 2 of 33)","intron (NM_001081206, intron 2 of 33)",156402,"NM_001081206",320127,"Mm.119469","NM_001081206","ENSMUSG00000038665","Dgki","C130010K08Rik","diacylglycerol kinase, iota","protein-coding"]
[1980,"chr4",151339179,151340904,"+",0,"NA","intron (NM_001081557, intron 5 of 23)","L1MD|LINE|L1",250471,"NM_001308446",105704528,"Mm.415128","NM_001308446",null,"Gm13090","OTTMUSG00000010356","predicted gene 13090","protein-coding"]
[2275,"chr7",28334743,28335204,"+",0,"NA","intron (NM_013676, intron 2 of 29)","intron (NM_013676, intron 2 of 29)",3746,"NM_013676",20924,"Mm.285906","NM_013676","ENSMUSG00000003435","Supt5","AL033283|AL033321|AU019549|Spt5|Supt5h","suppressor of Ty 5","protein-coding"]
[2685,"chr9",104095944,104096135,"+",0,"NA","intron (NM_175324, intron 12 of 19)","intron (NM_175324, intron 12 of 19)",30604,"NM_145700",252837,"Mm.269254","NM_145700","ENSMUSG00000079355","Ackr4","A630091E18Rik|CCBP2|CCR11|CCX-CKR|CCX-CKR1|Ccrl1|Cmkbrl1|PPR1|VSHK1","atypical chemokine receptor 4","protein-coding"]
[1295,"chr18",35642394,35643993,"+",0,"NA","Intergenic","RLTR23|LTR|ERV1",6174,"NM_027222",69816,"Mm.27252","NM_027222","ENSMUSG00000024353","Mzb1","2010001M09Rik|AV064572|PACAP|pERp1","marginal zone B and B1 cell-specific protein 1","protein-coding"]
[677,"chr13",5840798,5842077,"+",0,"NA","Intergenic","Intergenic",16655,"NR_045891",71867,"Mm.179181","NR_045891","ENSMUSG00000100625","1700016G22Rik","-","RIKEN cDNA 1700016G22 gene","ncRNA"]
[1111,"chr16",56798354,56800376,"+",0,"NA","Intergenic","Intergenic",-3507,"NM_172825",239853,"Mm.258979","NM_172825","ENSMUSG00000022755","Adgrg7","9130020O16Rik|Gpr128","adhesion G protein-coupled receptor G7","protein-coding"]
[907,"chr14",119007126,119007297,"+",0,"NA","exon (NM_001081252, exon 34 of 39)","exon (NM_001081252, exon 34 of 39)",69279,"NM_008929",100037258,"Mm.12616","NM_008929","ENSMUSG00000022136","Dnajc3","AA408985|AU067833|Dnajc3a|Dnajc3b|Prkri|mp58|p58|p58IPK","DnaJ (Hsp40) homolog, subfamily C, member 3","protein-coding"]
[2238,"chr6",135191146,135191590,"+",0,"NA","intron (NR_040296, intron 3 of 4)","MTB|LTR|ERVL-MaLR",2888,"NR_040296",100502888,"Mm.437844","NR_040296","ENSMUSG00000108239","Gm19434","-","predicted gene, 19434","ncRNA"]
[1868,"chr4",59434418,59434926,"+",0,"NA","intron (NM_001163288, intron 1 of 16)","IMPB_01|Satellite|Satellite",3961,"NM_001163288",634731,"Mm.483589","NM_001163288","ENSMUSG00000038578","Susd1","A530080P10|Gm12528|OTTMUSG00000007332","sushi domain containing 1","protein-coding"]
[590,"chr12",70671765,70674316,"+",0,"NA","Intergenic","Intergenic",-152474,"NM_028127",319710,"Mm.2962","NM_028127","ENSMUSG00000048285","Frmd6","2610019M19Rik|4930488L10Rik|AW212977|Willin","FERM domain containing 6","protein-coding"]
[1210,"chr17",36022917,36024728,"+",0,"NA","intron (NR_015618, intron 1 of 1)","intron (NR_015618, intron 1 of 1)",-3262,"NM_008207",15042,"Mm.439654","NM_008207","ENSMUSG00000053835","H2-T24","H-2T24","histocompatibility 2, T region locus 24","protein-coding"]
[664,"chr12",112586573,112586830,"+",0,"NA","Intergenic","Intergenic",-2083,"NM_198411",70435,"Mm.250193","NM_198411","ENSMUSG00000037679","Inf2","2610204M08Rik|AA589465|AW125550|EG629699","inverted formin, FH2 and WH2 domain containing","protein-coding"]
[1790,"chr3",127796782,127797880,"+",0,"NA","3' UTR (NM_145133, exon 3 of 3)","3' UTR (NM_145133, exon 3 of 3)",7418,"NM_145133",211550,"Mm.31852","NM_145133","ENSMUSG00000046688","Tifa","T2bp","TRAF-interacting protein with forkhead-associated domain","protein-coding"]
[1878,"chr4",89163974,89164373,"+",0,"NA","intron (NM_024433, intron 4 of 7)","intron (NM_024433, intron 4 of 7)",26803,"NM_024433",66902,"Mm.28500","NM_024433","ENSMUSG00000062937","Mtap","1300019I21Rik|MSAP","methylthioadenosine phosphorylase","protein-coding"]
[2388,"chr7",132735643,132736132,"+",0,"NA","intron (NM_175268, intron 4 of 4)","intron (NM_175268, intron 4 of 4)",51048,"NM_175268",77938,"Mm.225649","NM_175268","ENSMUSG00000030956","Fam53b","A930008G19Rik|mKIAA0140","family with sequence similarity 53, member B","protein-coding"]
[2264,"chr7",19831313,19831683,"+",0,"NA","Intergenic","MIR|SINE|MIR",-8743,"NM_033601",12051,"Mm.439658","NM_033601","ENSMUSG00000053175","Bcl3","AI528691|Bcl-3","B cell leukemia/lymphoma 3","protein-coding"]
[1690,"chr3",52576365,52576494,"+",0,"NA","Intergenic","MTD|LTR|ERVL-MaLR",-163295,"NR_038079",329639,"Mm.131245","NR_038079","ENSMUSG00000102785","Gm2447","100039832|A530017F20","predicted gene 2447","ncRNA"]
[617,"chr12",79501709,79504119,"+",0,"NA","intron (NM_009014, intron 7 of 10)","intron (NM_009014, intron 7 of 10)",205563,"NM_001252562",19363,"Mm.341756","NM_009014","ENSMUSG00000059060","Rad51b","AI553500|R51H2|Rad51l1|mREC2","RAD51 homolog B","protein-coding"]
[79,"chr1",93130553,93131250,"+",0,"NA","Intergenic","Intergenic",-4339,"NM_016702",11611,"Mm.7457","NM_016702","ENSMUSG00000026272","Agxt","AGT|Agt1|Agxt1|SPT","alanine-glyoxylate aminotransferase","protein-coding"]
[1420,"chr19",46025279,46026651,"+",0,"NA","Intergenic","B4A|SINE|B4",13656,"NM_010697",16825,"Mm.327442","NM_010697","ENSMUSG00000025223","Ldb1","CLIM2|NLI","LIM domain binding 1","protein-coding"]
[352,"chr11",18879201,18879732,"+",0,"NA","TTS (NM_001193271)","TTS (NM_001193271)",139503,"NM_001193271",17268,"Mm.356578","NM_010789","ENSMUSG00000020160","Meis1","C530044H18Rik|Evi8","Meis homeobox 1","protein-coding"]
[2502,"chr8",106639853,106640932,"+",0,"NA","intron (NM_009864, intron 2 of 15)","intron (NM_009864, intron 2 of 15)",37042,"NM_009864",12550,"Mm.35605","NM_009864","ENSMUSG00000000303","Cdh1","AA960649|ARC-1|E-cad|Ecad|L-CAM|UVO|Um","cadherin 1","protein-coding"]
[126,"chr1",134771844,134771995,"+",0,"NA","intron (NM_001081307, intron 23 of 23)","intron (NM_001081307, intron 23 of 23)",31802,"NR_015606",329251,"Mm.188709","NM_001081307","ENSMUSG00000073557","Ppp1r12b","1810037O03Rik|9530009M10Rik|AI132431|Mypt2","protein phosphatase 1, regulatory (inhibitor) subunit 12B","protein-coding"]
[251,"chr10",44021735,44022181,"+",0,"NA","Intergenic","Intergenic",-17112,"NM_172393",11630,"Mm.292082","NM_172393","ENSMUSG00000019866","Aim1","AI462491|AI463325","absent in melanoma 1","protein-coding"]
[1034,"chr15",102998738,102999179,"+",0,"NA","Intergenic","Intergenic",8419,"NM_010466",15426,"Mm.6167","NM_010466",null,"Hoxc8","D130011F21Rik|Hox-3.1","homeobox C8","protein-coding"]
[1594,"chr2",136918686,136920451,"+",0,"NA","intron (NM_028201, intron 2 of 5)","intron (NM_028201, intron 2 of 5)",20217,"NM_001038641",74243,"Mm.330612","NM_028201","ENSMUSG00000027281","Slx4ip","2210009G21Rik|2410004I22Rik|C85661|Slxip","SLX4 interacting protein","protein-coding"]
[369,"chr11",46159962,46160291,"+",0,"NA","intron (NM_172524, intron 2 of 5)","MTD|LTR|ERVL-MaLR",6233,"NM_172524",214112,"Mm.225253","NM_172524","ENSMUSG00000020411","Nipal4","9530066K23Rik","NIPA-like domain containing 4","protein-coding"]
[1533,"chr2",70839248,70839375,"+",0,"NA","Intergenic","B1_Mur2|SINE|Alu",-13831,"NM_172664",228012,"Mm.136511","NM_172664","ENSMUSG00000041997","Tlk1","4930545J15Rik","tousled-like kinase 1","protein-coding"]
[1548,"chr2",79618453,79619067,"+",0,"NA","Intergenic","Intergenic",-16665,"NM_080558",70599,"Mm.272881","NM_080558","ENSMUSG00000027007","Ssfa2","5730488C15Rik|CS-1|CS1|KRAP|SPAG13|mKIAA1927","sperm specific antigen 2","protein-coding"]
[651,"chr12",101923199,101924350,"+",0,"NA","intron (NM_029705, intron 10 of 10)","Lx7|LINE|L1",-10603,"NM_028446",109181,"Mm.208618","NM_028446","ENSMUSG00000021188","Trip11","2610511G22Rik|3110031G15Rik|6030460N08Rik|AI450776|GMAP-210|TRIP230","thyroid hormone receptor interactor 11","protein-coding"]
[176,"chr1",172020568,172021116,"+",0,"NA","intron (NM_033509, intron 1 of 7)","intron (NM_033509, intron 1 of 7)",6453,"NM_033509",93840,"Mm.36148","NM_033509","ENSMUSG00000026556","Vangl2","C530001F03Rik|Lp|Lpp1|Ltap|Vang1l2|loop-tail|ska17|ska<m17Jus>|stbm|strabismus","vang-like 2 (van gogh, Drosophila)","protein-coding"]
[947,"chr15",38949947,38950071,"+",0,"NA","3' UTR (NM_080640, exon 2 of 2)","3' UTR (NM_080640, exon 2 of 2)",16100,"NM_080640",118452,"Mm.233837","NM_080640",null,"Baalc","2810457D07Rik","brain and acute leukemia, cytoplasmic","protein-coding"]
[256,"chr10",44723679,44724425,"+",0,"NA","Intergenic","L2|LINE|L2",-265304,"NM_007548",12142,"Mm.4800","NM_007548","ENSMUSG00000038151","Prdm1","Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo","PR domain containing 1, with ZNF domain","protein-coding"]
[1823,"chr4",9068239,9068847,"+",0,"NA","Intergenic","GA-rich|Low_complexity|Low_complexity",-200774,"NM_028940",74438,"Mm.473368","NM_028940","ENSMUSG00000041216","Clvs1","4933402J24Rik|Clvl1|Rlbp1l1","clavesin 1","protein-coding"]
[2537,"chr8",127025089,127025241,"+",0,"NA","Intergenic","Intergenic",-38891,"NM_033620",93742,"Mm.299254","NM_033620","ENSMUSG00000025812","Pard3","AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip","par-3 family cell polarity regulator","protein-coding"]
[2267,"chr7",24633605,24634545,"+",0,"NA","Intergenic","MER90a|LTR|ERV1",-2495,"NM_133743",72434,"Mm.281093","NM_133743","ENSMUSG00000057454","Lypd3","2310061G07Rik|C4.4a","Ly6/Plaur domain containing 3","protein-coding"]
[920,"chr15",9466355,9466502,"+",0,"NA","TTS (NM_029341)","TTS (NM_029341)",30400,"NM_029341",75568,"Mm.82143","NM_029341","ENSMUSG00000039676","Capsl","1700028N11Rik|AW125205","calcyphosine-like","protein-coding"]
[428,"chr11",76825174,76827384,"+",0,"NA","intron (NM_007754, intron 2 of 20)","intron (NM_007754, intron 2 of 20)",20729,"NM_007754",12874,"Mm.276736","NM_007754","ENSMUSG00000020841","Cpd","AA960140|AW322530|D830034L15Rik","carboxypeptidase D","protein-coding"]
[2305,"chr7",67442232,67443286,"+",0,"NA","Intergenic","Intergenic",-69901,"NM_001291195",17258,"Mm.132788","NM_001033713","ENSMUSG00000030557","Mef2a","A430079H05Rik","myocyte enhancer factor 2A","protein-coding"]
[887,"chr14",99728493,99730760,"+",0,"NA","Intergenic","Intergenic",420170,"NM_010636",16597,"Mm.396499","NM_010636",null,"Klf12","2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik","Kruppel-like factor 12","protein-coding"]
[72,"chr1",86463375,86464524,"+",0,"NA","Intergenic","RMER15|LTR|ERVL",37620,"NM_027966",71863,"Mm.179627","NM_027966","ENSMUSG00000036574","1700019O17Rik","-","RIKEN cDNA 1700019O17 gene","protein-coding"]
[500,"chr11",103892355,103892643,"+",0,"NA","intron (NM_008740, intron 8 of 20)","B3A|SINE|B2",61557,"NM_008740",18195,"Mm.260117","NM_008740","ENSMUSG00000034187","Nsf","AI316878|AU020090|AU067812|SKD2","N-ethylmaleimide sensitive fusion protein","protein-coding"]
[1221,"chr17",46932320,46932866,"+",0,"NA","intron (NM_146078, intron 45 of 46)","intron (NM_146078, intron 45 of 46)",22108,"NM_008938",19133,"Mm.291370","NM_008938","ENSMUSG00000023978","Prph2","AOFMD|AVMD|Nmf193|PRPH|RP7|Rd-2|Rd2|Rds|Tspan22|rds","peripherin 2","protein-coding"]
[1496,"chr2",32896003,32898892,"+",0,"NA","intron (NM_146119, intron 1 of 13)","intron (NM_146119, intron 1 of 13)",21313,"NM_146119",227737,"Mm.301646","NM_146119","ENSMUSG00000026796","Fam129b","9130404D14Rik","family with sequence similarity 129, member B","protein-coding"]
[1200,"chr17",31912021,31915480,"+",0,"NA","Intergenic","Intergenic",-57958,"NM_010831",17691,"Mm.290941","NM_010831","ENSMUSG00000024042","Sik1","Msk|Sik|Snf1lk","salt inducible kinase 1","protein-coding"]
[1757,"chr3",98099122,98099262,"+",0,"NA","intron (NM_010928, intron 6 of 33)","intron (NM_010928, intron 6 of 33)",-61620,"NM_027665",71078,"Mm.50711","NM_027665",null,"Adam30","4933424D07Rik|svph4","a disintegrin and metallopeptidase domain 30","protein-coding"]
[918,"chr15",7074151,7074976,"+",0,"NA","Intergenic","Intergenic",-55009,"NM_001113386",16880,"Mm.149720","NM_013584","ENSMUSG00000054263","Lifr","A230075M04Rik|AW061234|LIF","leukemia inhibitory factor receptor","protein-coding"]
[1682,"chr3",41522058,41522679,"+",0,"NA","non-coding (NR_130791, exon 3 of 6)","non-coding (NR_130791, exon 3 of 6)",6106,"NR_130791",78648,"Mm.366093","NR_130791",null,"2400006E01Rik","lncRNA-JADE","RIKEN cDNA 2400006E01 gene","ncRNA"]
[1413,"chr19",42100081,42101102,"+",0,"NA","intron (NM_145501, intron 1 of 8)","intron (NM_145501, intron 1 of 8)",10156,"NM_145501",84095,"Mm.117037","NM_145501","ENSMUSG00000025178","Pi4k2a","Pi4k2","phosphatidylinositol 4-kinase type 2 alpha","protein-coding"]
[2107,"chr5",147083846,147084875,"+",0,"NA","intron (NM_181730, intron 1 of 2)","intron (NM_181730, intron 1 of 2)",7014,"NM_009087",20018,"Mm.317557","NM_009087","ENSMUSG00000029642","Polr1d","1110003G10Rik|AC19|RPA16|Rpo1-3","polymerase (RNA) I polypeptide D","protein-coding"]
[1108,"chr16",55526800,55526922,"+",0,"NA","Intergenic","Intergenic",32130,"NR_039578",100628589,null,"NR_039578","ENSMUSG00000093292","Mir5118","mmu-mir-5118|mu-mir-5118","microRNA 5118","ncRNA"]
[1275,"chr18",11996348,11997043,"+",0,"NA","intron (NM_001289666, intron 13 of 14)","Tigger12|DNA|TcMar-Tigger",124842,"NR_110356",338363,"Mm.271567","NM_178801","ENSMUSG00000049411","Tmem241","6030446N20Rik","transmembrane protein 241","protein-coding"]
[2211,"chr6",120237821,120238146,"+",0,"NA","intron (NM_198884, intron 1 of 19)","intron (NM_198884, intron 1 of 19)",56576,"NM_198884",330406,"Mm.321840","NM_198884","ENSMUSG00000041372","B4galnt3","AB114826|B4GalNAcT3|C330047A21","beta-1,4-N-acetyl-galactosaminyl transferase 3","protein-coding"]
[1598,"chr2",137264642,137265038,"+",0,"NA","Intergenic","Intergenic",-148320,"NM_013822",16449,"Mm.22398","NM_013822","ENSMUSG00000027276","Jag1","ABE2|Gsfabe2|Htu|Ozz|Ser-1","jagged 1","protein-coding"]
[2282,"chr7",28949231,28950471,"+",0,"NA","intron (NM_021895, intron 1 of 20)","intron (NM_021895, intron 1 of 20)",12429,"NM_021895",60595,"Mm.81144","NM_021895","ENSMUSG00000054808","Actn4","C77391","actinin alpha 4","protein-coding"]
[1014,"chr15",97870737,97872735,"+",0,"NA","intron (NM_009504, intron 4 of 9)","intron (NM_009504, intron 4 of 9)",-27234,"NM_001204278",56233,"Mm.384027","NM_019572","ENSMUSG00000022475","Hdac7","5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062","histone deacetylase 7","protein-coding"]
[843,"chr14",47614520,47616350,"+",0,"NA","Intergenic","RMER1B|Other|Other",-33876,"NM_001293636",16709,"Mm.3110","NM_008477","ENSMUSG00000021843","Ktn1","-","kinectin 1","protein-coding"]
[1856,"chr4",56481073,56485724,"+",0,"NA","Intergenic","Intergenic",258027,"NM_025271",11471,"Mm.251434","NM_025271","ENSMUSG00000070980","Actl7b","Tact1","actin-like 7b","protein-coding"]
[2529,"chr8",125641223,125641340,"+",0,"NA","Intergenic","Intergenic",-28537,"NM_028908",74393,"Mm.41709","NM_028908","ENSMUSG00000050930","Map10","4933403G14Rik|AI835009|mKIAA1383","microtubule-associated protein 10","protein-coding"]
[1491,"chr2",32869417,32871309,"+",0,"NA","Intergenic","Intergenic",-5771,"NM_146119",227737,"Mm.301646","NM_146119","ENSMUSG00000026796","Fam129b","9130404D14Rik","family with sequence similarity 129, member B","protein-coding"]
[1362,"chr19",7301922,7302942,"+",0,"NA","intron (NM_001080388, intron 1 of 16)","intron (NM_001080388, intron 1 of 16)",-6985,"NM_001080390",13728,"Mm.258986","NM_007928","ENSMUSG00000024969","Mark2","EMK-1|Emk|Par-1|Par-1b","MAP/microtubule affinity regulating kinase 2","protein-coding"]
[1804,"chr3",138333815,138334728,"+",0,"NA","Intergenic","Intergenic",20985,"NM_026945",69117,"Mm.46265","NM_026945","ENSMUSG00000053054","Adh6a","1810009C16Rik|Adh5a","alcohol dehydrogenase 6A (class V)","protein-coding"]
[2315,"chr7",73535815,73535959,"+",0,"NA","intron (NM_001081345, intron 2 of 38)","intron (NM_001081345, intron 2 of 38)",5859,"NM_001081345",244059,"Mm.34539","NM_001081345","ENSMUSG00000078671","Chd2","2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2","chromodomain helicase DNA binding protein 2","protein-coding"]
[632,"chr12",83998713,83998984,"+",0,"NA","Intergenic","Intergenic",-10654,"NM_012006",26897,"Mm.1978","NM_012006","ENSMUSG00000072949","Acot1","ACH2|CTE-1|CTE-I|Cte1|D12Ucla1","acyl-CoA thioesterase 1","protein-coding"]
[2357,"chr7",110108923,110109096,"+",0,"NA","Intergenic","Intergenic",-13050,"NM_009516",22390,"Mm.287173","NM_009516",null,"Wee1","Wee1A","WEE 1 homolog 1 (S. pombe)","protein-coding"]
[394,"chr11",60369545,60369675,"+",0,"NA","intron (NM_029044, intron 5 of 13)","L2|LINE|L2",16230,"NM_029044",74665,"Mm.133570","NM_029044","ENSMUSG00000056598","Lrrc48","4930449E07Rik","leucine rich repeat containing 48","protein-coding"]
[1371,"chr19",9057736,9060759,"+",0,"NA","intron (NM_001286518, intron 6 of 6)","intron (NM_001286518, intron 6 of 6)",28709,"NM_011681",22287,"Mm.2258","NM_011681","ENSMUSG00000024653","Scgb1a1","CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg","secretoglobin, family 1A, member 1 (uteroglobin)","protein-coding"]
[2484,"chr8",94981450,94983212,"+",0,"NA","intron (NM_001198894, intron 1 of 13)","intron (NM_001198894, intron 1 of 13)",-2068,"NM_018882",14766,"Mm.290834","NM_018882","ENSMUSG00000031785","Adgrg1","Cyt28|Gpr56|TM7LN4|TM7XN1","adhesion G protein-coupled receptor G1","protein-coding"]
[2257,"chr7",16404445,16406687,"+",0,"NA","intron (NM_198631, intron 1 of 13)","intron (NM_198631, intron 1 of 13)",4370,"NM_198631",330474,"Mm.333594","NM_198631","ENSMUSG00000059273","Zc3h4","Bwq1|Gm768|Kiaa1064-hp|mKIAA1064","zinc finger CCCH-type containing 4","protein-coding"]
[610,"chr12",76926901,76927427,"+",0,"NA","Intergenic","MIRb|SINE|MIR",35084,"NM_008558",17187,"Mm.268548","NM_008558","ENSMUSG00000059436","Max","AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8","Max protein","protein-coding"]
[514,"chr11",113199024,113199448,"+",0,"NA","intron (NR_015556, intron 1 of 2)","intron (NR_015556, intron 1 of 2)",2602,"NR_015556",72386,"Mm.266961","NR_015556","ENSMUSG00000087259","2610035D17Rik","-","RIKEN cDNA 2610035D17 gene","ncRNA"]
[2659,"chr9",83822612,83823622,"+",0,"NA","Intergenic","Intergenic",-11572,"NM_009445",22137,"Mm.1904","NM_009445","ENSMUSG00000038379","Ttk","AL022661|Esk1|Mps1|PYT|esk","Ttk protein kinase","protein-coding"]
[2444,"chr8",64725420,64726548,"+",0,"NA","intron (NM_025436, intron 2 of 5)","intron (NM_025436, intron 2 of 5)",7594,"NM_025436",66234,"Mm.30119","NM_025436","ENSMUSG00000031604","Msmo1","1500001G16Rik|C78600|DESP4|ERG25|Sc4mol","methylsterol monoxygenase 1","protein-coding"]
[725,"chr13",40912973,40914243,"+",0,"NA","intron (NM_008105, intron 1 of 2)","intron (NM_008105, intron 1 of 2)",-4026,"NM_133219",14538,"Mm.314757","NM_008105","ENSMUSG00000021360","Gcnt2","5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC","glucosaminyl (N-acetyl) transferase 2, I-branching enzyme","protein-coding"]
[513,"chr11",113196487,113196694,"+",0,"NA","intron (NR_015556, intron 1 of 2)","intron (NR_015556, intron 1 of 2)",5248,"NR_015556",72386,"Mm.266961","NR_015556","ENSMUSG00000087259","2610035D17Rik","-","RIKEN cDNA 2610035D17 gene","ncRNA"]
[50,"chr1",72196175,72196997,"+",0,"NA","intron (NM_001005423, intron 1 of 4)","intron (NM_001005423, intron 1 of 4)",15721,"NM_001005423",381269,"Mm.422636","NM_001005423","ENSMUSG00000039395","Mreg","Gm974|Wdt2|dsu","melanoregulin","protein-coding"]
[2645,"chr9",77573938,77574074,"+",0,"NA","Intergenic","Lx8|LINE|L1",-29154,"NM_001146048",214345,"Mm.28534","NM_172528","ENSMUSG00000032352","Lrrc1","A430093J20Rik|AU016091|D030059I21|mKIAA4018","leucine rich repeat containing 1","protein-coding"]
[1519,"chr2",59446442,59447321,"+",0,"NA","Intergenic","Intergenic",-37772,"NM_029723",76747,"Mm.275769","NM_029723","ENSMUSG00000026989","Dapl1","2310032F03Rik|EEDA","death associated protein-like 1","protein-coding"]
[1994,"chr5",24751031,24751158,"+",0,"NA","TTS (NM_153076)","TTS (NM_153076)",6749,"NM_153076",214301,"Mm.63484","NM_153076",null,"Crygn","-","crystallin, gamma N","protein-coding"]
[2633,"chr9",71175144,71175254,"+",0,"NA","intron (NR_110517, intron 2 of 5)","intron (NR_110517, intron 2 of 5)",6423,"NR_110517",102635087,"Mm.444536","NR_110517",null,"Gm32511","-","predicted gene, 32511","ncRNA"]
[797,"chr13",102876674,102877510,"+",0,"NA","intron (NM_175171, intron 4 of 28)","intron (NM_175171, intron 4 of 28)",116837,"NR_130171",76624,"Mm.426384","NR_130171","ENSMUSG00000091906","1700099I09Rik","-","RIKEN cDNA 1700099I09 gene","ncRNA"]
[2459,"chr8",80847907,80848548,"+",0,"NA","intron (NM_001301298, intron 1 of 10)","intron (NM_001301298, intron 1 of 10)",32252,"NM_021356",14388,"Mm.277409","NM_021356","ENSMUSG00000031714","Gab1","AA408973|AW107238","growth factor receptor bound protein 2-associated protein 1","protein-coding"]
[2197,"chr6",108570065,108571003,"+",0,"NA","Intergenic","Intergenic",52633,"NR_040757",75394,"Mm.395061","NR_040757","ENSMUSG00000087341","0610040F04Rik","-","RIKEN cDNA 0610040F04 gene","ncRNA"]
[1136,"chr16",87609637,87612076,"+",0,"NA","Intergenic","Intergenic",57526,"NM_144854",224419,"Mm.194466","NM_144854","ENSMUSG00000025610","Map3k7cl","C21orf7|ORF63|Tak1l","Map3k7 C-terminal like","protein-coding"]
[1175,"chr17",23543273,23544228,"+",0,"NA","Intergenic","RMER20A|LTR|ERVK",-7049,"NR_126485",320020,"Mm.445111","NR_126484",null,"6330415G19Rik","-","RIKEN cDNA 6330415G19 gene","ncRNA"]
[1236,"chr17",70986765,70986938,"+",0,"NA","intron (NM_023402, intron 1 of 3)","intron (NM_023402, intron 1 of 3)",3665,"NM_023402",67938,"Mm.261329","NM_023402",null,"Myl12b","1500001M02Rik|C77744|Mylc2b|RLC-B","myosin, light chain 12B, regulatory","protein-coding"]
[1683,"chr3",51194630,51196162,"+",0,"NA","Intergenic","MLT1J|LTR|ERVL-MaLR",-29051,"NM_009834",12457,"Mm.86541","NM_009834","ENSMUSG00000023087","Noct","AU043840|Ccr4|Ccrn4l","nocturnin","protein-coding"]
[2413,"chr8",22650664,22651751,"+",0,"NA","intron (NM_011130, intron 2 of 13)","MERVL_2A-int|LTR|ERVL",2230,"NM_011130",18970,"Mm.123211","NM_011130","ENSMUSG00000031536","Polb","A430088C08Rik","polymerase (DNA directed), beta","protein-coding"]
[645,"chr12",91694037,91694200,"+",0,"NA","intron (NM_175367, intron 4 of 6)","intron (NM_175367, intron 4 of 6)",92318,"NM_175367",108800,"Mm.23125","NM_175367",null,"Ston2","4933401N24Rik|AI425999|AW544599","stonin 2","protein-coding"]
[1326,"chr18",62139774,62139898,"+",0,"NA","Intergenic","Intergenic",40145,"NM_007420",11555,"Mm.5598","NM_007420","ENSMUSG00000045730","Adrb2","Adrb-2|Badm|Gpcr7","adrenergic receptor, beta 2","protein-coding"]
[2566,"chr9",43034473,43035226,"+",0,"NA","intron (NM_027144, intron 4 of 40)","(GGGA)n|Simple_repeat|Simple_repeat",70869,"NM_027144",69632,"Mm.275266","NM_027144","ENSMUSG00000059495","Arhgef12","2310014B11Rik|AU019857|Larg|mKIAA0382","Rho guanine nucleotide exchange factor (GEF) 12","protein-coding"]
[1382,"chr19",21077537,21077852,"+",0,"NA","Intergenic","Intergenic",-27016,"NR_126458",75354,"Mm.243873","NR_126458",null,"4930554I06Rik","-","RIKEN cDNA 4930554I06 gene","ncRNA"]
[1176,"chr17",23546910,23547258,"+",0,"NA","Intergenic","CpG",-3715,"NR_126485",320020,"Mm.445111","NR_126484",null,"6330415G19Rik","-","RIKEN cDNA 6330415G19 gene","ncRNA"]
[1452,"chr2",14108068,14108460,"+",0,"NA","intron (NM_011484, intron 2 of 13)","ORR1C1|LTR|ERVL-MaLR",34152,"NM_011484",20844,"Mm.273174","NM_011484","ENSMUSG00000026718","Stam","STAM1","signal transducing adaptor molecule (SH3 domain and ITAM motif) 1","protein-coding"]
[2384,"chr7",130215406,130216243,"+",0,"NA","intron (NM_010207, intron 6 of 17)","intron (NM_010207, intron 6 of 17)",50984,"NM_010207",14183,"Mm.16340","NM_010207","ENSMUSG00000030849","Fgfr2","AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs","fibroblast growth factor receptor 2","protein-coding"]
[1039,"chr16",10366162,10366518,"+",0,"NA","intron (NM_001291001, intron 5 of 6)","L2a|LINE|L2",29108,"NM_001099275",70426,"Mm.142181","NM_001099275","ENSMUSG00000039179","Tekt5","3300001K11Rik","tektin 5","protein-coding"]
[1815,"chr3",152127588,152127897,"+",0,"NA","intron (NM_016867, intron 3 of 5)","intron (NM_016867, intron 3 of 5)",38158,"NM_016867",54120,"Mm.97","NM_016867",null,"Gipc2","2200002N01Rik|AU021850|Semcap2","GIPC PDZ domain containing family, member 2","protein-coding"]
[2637,"chr9",74920961,74921185,"+",0,"NA","Intergenic","B1F1|SINE|Alu",-31980,"NM_001113283",235493,"Mm.208955","NM_153584","ENSMUSG00000034858","Fam214a","6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370","family with sequence similarity 214, member A","protein-coding"]
[1005,"chr15",96770581,96771662,"+",0,"NA","Intergenic","Intergenic",-71423,"NM_175121",67760,"Mm.46754","NM_175121","ENSMUSG00000022462","Slc38a2","5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382","solute carrier family 38, member 2","protein-coding"]
[28,"chr1",51525852,51526889,"+",0,"NA","Intergenic","Intergenic",-47971,"NM_001310549",109019,"Mm.196290","NM_028696","ENSMUSG00000026107","Nabp1","4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2","nucleic acid binding protein 1","protein-coding"]
[2089,"chr5",125147583,125148089,"+",0,"NA","intron (NM_011424, intron 1 of 46)","intron (NM_011424, intron 1 of 46)",31378,"NM_001253905",20602,"Mm.278646","NM_011424","ENSMUSG00000029478","Ncor2","N-CoR|SMRT|SMRTe","nuclear receptor co-repressor 2","protein-coding"]
[589,"chr12",70647945,70648250,"+",0,"NA","intron (NR_037248, intron 4 of 4)","intron (NR_037248, intron 4 of 4)",-177417,"NM_028127",319710,"Mm.2962","NM_028127","ENSMUSG00000048285","Frmd6","2610019M19Rik|4930488L10Rik|AW212977|Willin","FERM domain containing 6","protein-coding"]
[2087,"chr5",124453780,124453978,"+",0,"NA","intron (NM_001310723, intron 4 of 6)","intron (NM_001310723, intron 4 of 6)",7175,"NM_001310727",67956,"Mm.137966","NM_030241","ENSMUSG00000049327","Setd8","2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07","SET domain containing (lysine methyltransferase) 8","protein-coding"]
[1337,"chr18",65738903,65741411,"+",0,"NA","intron (NM_177028, intron 10 of 14)","intron (NM_177028, intron 10 of 14)",41889,"NM_177028",319888,"Mm.183576","NM_177028","ENSMUSG00000046610","Oacyl","5330437I02Rik|Acyl3","O-acyltransferase like","protein-coding"]
[215,"chr1",194879165,194880110,"+",0,"NA","Intergenic","Intergenic",-59184,"NM_133654",12490,"Mm.29798","NM_133654","ENSMUSG00000016494","Cd34","AU040960","CD34 antigen","protein-coding"]
[687,"chr13",30108260,30109363,"+",0,"NA","Intergenic","Intergenic",-27679,"NM_153546",218121,"Mm.89682","NM_153546","ENSMUSG00000038732","Mboat1","9130215M02Rik|BC023845|LPEAT1|Moact1|Oact1","membrane bound O-acyltransferase domain containing 1","protein-coding"]
[2098,"chr5",137940681,137941321,"+",0,"NA","Intergenic","Intergenic",-19382,"NM_007819",13113,"Mm.289886","NM_007819","ENSMUSG00000029727","Cyp3a13","IIIAm2","cytochrome P450, family 3, subfamily a, polypeptide 13","protein-coding"]
[2184,"chr6",94635704,94635846,"+",0,"NA","intron (NM_008377, intron 3 of 18)","intron (NM_008377, intron 3 of 18)",-29360,"NR_106008",102466992,null,"NR_106008","ENSMUSG00000098531","Mir7041","Gm27872|mmu-mir-7041","microRNA 7041","ncRNA"]
[150,"chr1",152061596,152061862,"+",0,"NA","intron (NM_197990, intron 1 of 5)","intron (NM_197990, intron 1 of 5)",28591,"NM_197990",69399,"Mm.278031","NM_197990","ENSMUSG00000032666","1700025G04Rik","2610510E02Rik|2900042O04Rik|ENSMUSG00000073540","RIKEN cDNA 1700025G04 gene","protein-coding"]
[2298,"chr7",45654520,45655874,"+",0,"NA","intron (NM_018876, intron 1 of 1)","intron (NM_018876, intron 1 of 1)",11197,"NM_018876",14344,"Mm.290046","NM_018876","ENSMUSG00000055978","Fut2","-","fucosyltransferase 2","protein-coding"]
[2336,"chr7",80840585,80841009,"+",0,"NA","Intergenic","Intergenic",-21311,"NM_009553",22691,"Mm.358645","NM_009553","ENSMUSG00000038797","Zscan2","Zfp-29|Zfp29","zinc finger and SCAN domain containing 2","protein-coding"]
[245,"chr10",37368400,37368777,"+",0,"NA","Intergenic","Intergenic",-229662,"NM_008538",17118,"Mm.30059","NM_008538","ENSMUSG00000069662","Marcks","Macs|PKCSL","myristoylated alanine rich protein kinase C substrate","protein-coding"]
[2604,"chr9",64701508,64702507,"+",0,"NA","intron (NM_001134399, intron 23 of 24)","intron (NM_001134399, intron 23 of 24)",35749,"NM_017382",53869,"Mm.1387","NM_017382","ENSMUSG00000004771","Rab11a","-","RAB11A, member RAS oncogene family","protein-coding"]
[2511,"chr8",117122961,117124172,"+",0,"NA","intron (NM_001163028, intron 7 of 11)","intron (NM_001163028, intron 7 of 11)",27701,"NM_001163028",63857,"Mm.174133","NM_021486","ENSMUSG00000031845","Bco1","Bcdo|Bcdo1|Bcmo1|CMO1|Cmoi|beta-CD|betaCMOOX","beta-carotene oxygenase 1","protein-coding"]
[2190,"chr6",103346729,103347226,"+",0,"NA","Intergenic","Intergenic",-163899,"NM_007697",12661,"Mm.251288","NM_007697","ENSMUSG00000030077","Chl1","A530023M13Rik|AI465420|CALL|LICAM2","cell adhesion molecule with homology to L1CAM","protein-coding"]
[2546,"chr9",15241950,15242131,"+",0,"NA","intron (NM_026955, intron 1 of 3)","MLT1-int|LTR|ERVL-MaLR",2995,"NM_026955",69137,"Mm.41396","NM_026955","ENSMUSG00000031937","Vstm5","2200002K05Rik","V-set and transmembrane domain containing 5","protein-coding"]
[826,"chr14",20844645,20847018,"+",0,"NA","Intergenic","Intergenic",9169,"NM_008873",18792,"Mm.4183","NM_008873","ENSMUSG00000021822","Plau","u-PA|uPA","plasminogen activator, urokinase","protein-coding"]
[2494,"chr8",106525146,106525964,"+",0,"NA","intron (NM_007665, intron 2 of 15)","intron (NM_007665, intron 2 of 15)",14703,"NM_001037809",12560,"Mm.4658","NM_007665","ENSMUSG00000061048","Cdh3","AI385538|Cadp|Cdhp|P-cadherin|Pcad","cadherin 3","protein-coding"]
[1344,"chr18",76063668,76063833,"+",0,"NA","intron (NM_145356, intron 3 of 4)","intron (NM_145356, intron 3 of 4)",34721,"NR_045365",73009,"Mm.443541","NR_045365",null,"2900057B20Rik","-","RIKEN cDNA 2900057B20 gene","ncRNA"]
[2666,"chr9",90276003,90276270,"+",0,"NA","Intergenic","L2b|LINE|L2",-5367,"NM_194334",67016,"Mm.335347","NM_194334","ENSMUSG00000037410","Tbc1d2b","1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055","TBC1 domain family, member 2B","protein-coding"]
[332,"chr10",116752663,116752977,"+",0,"NA","Intergenic","Intergenic",23567,"NR_131036",75878,"Mm.370607","NR_131036",null,"4930579P08Rik","-","RIKEN cDNA 4930579P08 gene","ncRNA"]
[2329,"chr7",80773948,80774268,"+",0,"NA","intron (NM_016721, intron 2 of 37)","intron (NM_016721, intron 2 of 37)",29223,"NM_016721",29875,"Mm.207619","NM_016721","ENSMUSG00000030536","Iqgap1","AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051","IQ motif containing GTPase activating protein 1","protein-coding"]
[1099,"chr16",33871543,33873137,"+",0,"NA","intron (NM_001145884, intron 3 of 14)","intron (NM_001145884, intron 3 of 14)",42675,"NM_001145884",16419,"Mm.6424","NM_010580","ENSMUSG00000022817","Itgb5","AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5","integrin beta 5","protein-coding"]
[1965,"chr4",148818551,148821241,"+",0,"NA","intron (NM_001159344, intron 1 of 20)","intron (NM_001159344, intron 1 of 20)",15504,"NM_027195",69743,"Mm.233879","NM_027195","ENSMUSG00000028977","Casz1","2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e","castor zinc finger 1","protein-coding"]
[745,"chr13",54605150,54606005,"+",0,"NA","intron (NM_028870, intron 2 of 4)","intron (NM_028870, intron 2 of 4)",5695,"NM_028870",74325,"Mm.290026","NM_028870","ENSMUSG00000047547","Cltb","2310046E19Rik","clathrin, light polypeptide (Lcb)","protein-coding"]
[34,"chr1",58431327,58431481,"+",0,"NA","intron (NM_001285826, intron 6 of 6)","intron (NM_001285826, intron 6 of 6)",-7316,"NR_027854",12747,"Mm.1761","NM_009905","ENSMUSG00000026034","Clk1","STY","CDC-like kinase 1","protein-coding"]
[2653,"chr9",78782782,78783371,"+",0,"NA","Intergenic","Intergenic",167530,"NM_153098",235505,"Mm.32955","NM_153098","ENSMUSG00000046186","Cd109","9930012E15Rik|AI480638|GARP","CD109 antigen","protein-coding"]
[2656,"chr9",83721599,83721737,"+",0,"NA","Intergenic","Intergenic",30193,"NR_046066",100039222,"Mm.405596","NR_046066","ENSMUSG00000100155","Gm2109","-","predicted gene 2109","ncRNA"]
[2548,"chr9",20945349,20945981,"+",0,"NA","intron (NM_001199432, intron 1 of 38)","B1_Mur3|SINE|Alu",6958,"NM_001199433",13433,"Mm.128580","NM_010066","ENSMUSG00000004099","Dnmt1","Cxxc9|Dnmt|Dnmt1o|MCMT|MTase|Met-1|Met1|MommeD2|m.MmuI","DNA methyltransferase (cytosine-5) 1","protein-coding"]
[2082,"chr5",123696756,123697769,"+",0,"NA","Intergenic","RSINE1|SINE|B4",-12901,"NM_001291229",56430,"Mm.241109","NM_019765","ENSMUSG00000049550","Clip1","1110007I12Rik|4631429H07Rik|AV017631|C81039|CLIP-170|CLIP170|CYLN1|Clip50|Rsn|mKIAA4046|restin","CAP-GLY domain containing linker protein 1","protein-coding"]
[2613,"chr9",69054106,69054637,"+",0,"NA","intron (NM_013646, intron 1 of 10)","intron (NM_013646, intron 1 of 10)",-235470,"NM_001289916",19883,"Mm.378450","NM_013646","ENSMUSG00000032238","Rora","9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26","RAR-related orphan receptor alpha","protein-coding"]
[620,"chr12",79524841,79525537,"+",0,"NA","intron (NM_009014, intron 7 of 10)","intron (NM_009014, intron 7 of 10)",227838,"NM_001252562",19363,"Mm.341756","NM_009014","ENSMUSG00000059060","Rad51b","AI553500|R51H2|Rad51l1|mREC2","RAD51 homolog B","protein-coding"]
[1410,"chr19",37353189,37353326,"+",0,"NA","Intergenic","Intergenic",-22644,"NM_031156",15925,"Mm.28366","NM_031156","ENSMUSG00000056999","Ide","1300012G03Rik|4833415K22Rik|AA675336|AI507533","insulin degrading enzyme","protein-coding"]
[2693,"chr9",107312540,107313324,"+",0,"NA","Intergenic","Intergenic",16243,"NM_009895",12700,"Mm.4592","NM_009895",null,"Cish","AI385595|CIS1|Cis|F17|F23","cytokine inducible SH2-containing protein","protein-coding"]
[1434,"chr19",57014609,57014845,"+",0,"NA","Intergenic","Intergenic",-6152,"NM_001177797",226250,"Mm.226284","NM_146102","ENSMUSG00000025083","Afap1l2","AU041783|C86904|mKIAA1914","actin filament associated protein 1-like 2","protein-coding"]
[2713,"chr9",120115089,120116789,"+",0,"NA","intron (NM_144793, intron 1 of 6)","intron (NM_144793, intron 1 of 6)",5540,"NM_144793",208638,"Mm.236656","NM_144793","ENSMUSG00000032519","Slc25a38","AV019094|BC010801","solute carrier family 25, member 38","protein-coding"]
[2625,"chr9",70277190,70277689,"+",0,"NA","intron (NM_181072, intron 1 of 27)","ID|SINE|ID",70089,"NM_181072",71602,"Mm.249311","NM_181072","ENSMUSG00000032220","Myo1e","2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3","myosin IE","protein-coding"]
[2471,"chr8",90824991,90826111,"+",0,"NA","Intergenic","Intergenic",-3284,"NM_177224",109151,"Mm.100615","NM_177224","ENSMUSG00000056608","Chd9","1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308","chromodomain helicase DNA binding protein 9","protein-coding"]
[1547,"chr2",79607234,79609264,"+",0,"NA","Intergenic","Intergenic",-27176,"NM_080558",70599,"Mm.272881","NM_080558","ENSMUSG00000027007","Ssfa2","5730488C15Rik|CS-1|CS1|KRAP|SPAG13|mKIAA1927","sperm specific antigen 2","protein-coding"]
[937,"chr15",37018787,37020206,"+",0,"NA","Intergenic","Intergenic",-12094,"NM_026521",68036,"Mm.371631","NM_026521","ENSMUSG00000062397","Zfp706","3110006P09Rik|AA793007|AW536850|C77232|Znf706","zinc finger protein 706","protein-coding"]
[1045,"chr16",13504890,13506745,"+",0,"NA","Intergenic","Intergenic",14602,"NR_037997",70100,"Mm.158330","NR_037997","ENSMUSG00000099411","2310015D24Rik","-","RIKEN cDNA 2310015D24 gene","ncRNA"]
[1619,"chr2",148630772,148631541,"+",0,"NA","Intergenic","Intergenic",-41459,"NM_019761",56488,"Mm.34663","NM_019761","ENSMUSG00000036992","Nxt1","1110001N02Rik","NTF2-related export protein 1","protein-coding"]
[730,"chr13",45913813,45915521,"+",0,"NA","intron (NM_009124, intron 2 of 7)","intron (NM_009124, intron 2 of 7)",50324,"NM_001199304",20238,"Mm.342683","NM_009124","ENSMUSG00000046876","Atxn1","2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1","ataxin 1","protein-coding"]
[16,"chr1",36919424,36919980,"+",0,"NA","intron (NM_018872, intron 1 of 40)","intron (NM_018872, intron 1 of 40)",19825,"NM_018872",56030,"Mm.186943","NM_018872","ENSMUSG00000026116","Tmem131","2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257","transmembrane protein 131","protein-coding"]
[921,"chr15",10088387,10089298,"+",0,"NA","Intergenic","Intergenic",-88396,"NM_011169",19116,"Mm.10516","NM_011169","ENSMUSG00000005268","Prlr","AI987712|Pr-1|Pr-3|Prlr-rs1","prolactin receptor","protein-coding"]
[1069,"chr16",25281195,25283772,"+",0,"NA","Intergenic","Intergenic",-4334,"NM_175165",71338,"Mm.126851","NM_175165","ENSMUSG00000048399","Tprg","5430420C16Rik|Tprg1","transformation related protein 63 regulated","protein-coding"]
[2311,"chr7",72495662,72497161,"+",0,"NA","Intergenic","Intergenic",-189816,"NM_001024703",244049,"Mm.217412","NM_001024703","ENSMUSG00000032776","Mctp2","Gm489","multiple C2 domains, transmembrane 2","protein-coding"]
[1224,"chr17",51855071,51856456,"+",0,"NA","Intergenic","Intergenic",-22473,"NM_001163632",20230,"Mm.311655","NM_009122","ENSMUSG00000023927","Satb1","2610306G12Rik|AW413156","special AT-rich sequence binding protein 1","protein-coding"]
[368,"chr11",45830979,45832319,"+",0,"NA","non-coding (NR_045876, exon 2 of 4)","non-coding (NR_045876, exon 2 of 4)",-20315,"NM_001045520",216705,"Mm.169673","NM_001045520","ENSMUSG00000006169","Clint1","AI642036|AW537616|C530049I24Rik|Enth|Epn4|F630206G17Rik|mKIAA0171","clathrin interactor 1","protein-coding"]
[2556,"chr9",31851196,31852196,"+",0,"NA","intron (NM_013800, intron 3 of 3)","intron (NM_013800, intron 3 of 3)",61589,"NM_013800",12023,"Mm.261044","NM_013800","ENSMUSG00000032033","Barx2","2310006E12Rik|Barx2b","BarH-like homeobox 2","protein-coding"]
[994,"chr15",85298199,85298967,"+",0,"NA","Intergenic","Intergenic",-37798,"NM_016843",54138,"Mm.248906","NM_016843","ENSMUSG00000016541","Atxn10","AI325283|C77170|E46|Sca10|TEG-169|Tex169","ataxin 10","protein-coding"]
[611,"chr12",77020001,77020928,"+",0,"NA","Intergenic","Intergenic",-58216,"NM_001146176",17187,"Mm.268548","NM_008558","ENSMUSG00000059436","Max","AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8","Max protein","protein-coding"]
[1786,"chr3",121819629,121820395,"+",0,"NA","Intergenic","Intergenic",-4797,"NM_008991",19299,"Mm.399042","NM_008991","ENSMUSG00000028127","Abcd3","AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1","ATP-binding cassette, sub-family D (ALD), member 3","protein-coding"]
[1849,"chr4",55495933,55497397,"+",0,"NA","Intergenic","Intergenic",35810,"NM_010637",16600,"Mm.4325","NM_010637","ENSMUSG00000003032","Klf4","EZF|Gklf|Zie","Kruppel-like factor 4 (gut)","protein-coding"]
[849,"chr14",57882838,57883221,"+",0,"NA","intron (NM_029492, intron 1 of 12)","intron (NM_029492, intron 1 of 12)",7233,"NM_029492",75965,"Mm.29044","NM_029492","ENSMUSG00000021969","Zdhhc20","5033406L14Rik|AI448102|B230110O18Rik|HK11","zinc finger, DHHC domain containing 20","protein-coding"]
[2320,"chr7",74615481,74616302,"+",0,"NA","Intergenic","Intergenic",-61111,"NM_001038643",108116,"Mm.425467","NM_023908","ENSMUSG00000025790","Slco3a1","5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11","solute carrier organic anion transporter family, member 3a1","protein-coding"]
[492,"chr11",100898596,100900010,"+",0,"NA","intron (NM_213659, intron 11 of 23)","MLT1L|LTR|ERVL-MaLR",38819,"NM_001164062",20850,"Mm.277403","NM_011488","ENSMUSG00000004043","Stat5a","AA959963|STAT5","signal transducer and activator of transcription 5A","protein-coding"]
[208,"chr1",193517511,193517762,"+",0,"NA","Intergenic","Intergenic",-10106,"NR_029592",387201,null,"NR_029592","ENSMUSG00000065533","Mir205","Mirn205|mir-205|mmu-mir-205","microRNA 205","ncRNA"]
[2440,"chr8",57741740,57742614,"+",0,"NA","Intergenic","Intergenic",-89122,"NM_144731",108150,"Mm.62886","NM_144731","ENSMUSG00000031608","Galnt7","AI225872","UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7","protein-coding"]
[2140,"chr6",39243051,39243747,"+",0,"NA","Intergenic","Intergenic",-36626,"NM_001033430",338523,"Mm.293175","NM_001033430","ENSMUSG00000042599","Kdm7a","A630082K20Rik|BB041802|ENSMUSG00000073143|Jhdm1d|mKIAA1718","lysine (K)-specific demethylase 7A","protein-coding"]
[2271,"chr7",27221925,27222743,"+",0,"NA","intron (NM_181593, intron 1 of 6)","intron (NM_181593, intron 1 of 6)",6263,"NM_181593",233011,"Mm.30963","NM_181593","ENSMUSG00000003752","Itpkc","9130023N17Rik","inositol 1,4,5-trisphosphate 3-kinase C","protein-coding"]
[1523,"chr2",60695030,60696423,"+",0,"NA","intron (NM_001159564, intron 1 of 17)","intron (NM_001159564, intron 1 of 17)",-22033,"NM_021359",16420,"Mm.98193","NM_021359","ENSMUSG00000026971","Itgb6","2210409C20Rik|4831415H04Rik","integrin beta 6","protein-coding"]
[93,"chr1",107504908,107507558,"+",0,"NA","Intergenic","Intergenic",-5190,"NM_001174170",18788,"Mm.271870","NM_011111","ENSMUSG00000062345","Serpinb2","PAI-2|Planh2|ovalbumin","serine (or cysteine) peptidase inhibitor, clade B, member 2","protein-coding"]
[292,"chr10",80750778,80750907,"+",0,"NA","Intergenic","B4|SINE|B4",-4364,"NM_199322",208266,"Mm.152371","NM_199322","ENSMUSG00000061589","Dot1l","A630076O07|AW907654|Dot1|KMT4|mDot1","DOT1-like, histone H3 methyltransferase (S. cerevisiae)","protein-coding"]
[2445,"chr8",68083298,68083510,"+",0,"NA","Intergenic","Intergenic",-108830,"NM_177698",234353,"Mm.32525","NM_027626","ENSMUSG00000030465","Psd3","4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D","pleckstrin and Sec7 domain containing 3","protein-coding"]
[291,"chr10",80107491,80107954,"+",0,"NA","intron (NR_038088, intron 1 of 4)","intron (NR_038088, intron 1 of 4)",-5020,"NM_183426",216161,"Mm.262102","NM_183426","ENSMUSG00000035673","Sbno2","BC019206|F730040C21|Sno|Stno","strawberry notch homolog 2 (Drosophila)","protein-coding"]
[2429,"chr8",32264737,32265331,"+",0,"NA","Intergenic","Intergenic",113139,"NR_046039",666589,"Mm.367675","NR_046039",null,"Gm8179","EG666589","predicted gene 8179","ncRNA"]
[374,"chr11",46225730,46226934,"+",0,"NA","intron (NM_133769, intron 23 of 30)","MLT1A|LTR|ERVL-MaLR",-5803,"NR_105955",102465598,null,"NR_105955","ENSMUSG00000099230","Mir6989","Gm27885|mmu-mir-6989","microRNA 6989","ncRNA"]
[114,"chr1",131946137,131946319,"+",0,"NA","Intergenic","Intergenic",-16687,"NM_001177628",212980,"Mm.200307","NM_145977","ENSMUSG00000026435","Slc45a3","2210413P12Rik|AU023994|AU043764|IPCA-6|PRST|Pcanap6","solute carrier family 45, member 3","protein-coding"]
[429,"chr11",76873683,76875097,"+",0,"NA","Intergenic","Intergenic",-27382,"NM_007754",12874,"Mm.276736","NM_007754","ENSMUSG00000020841","Cpd","AA960140|AW322530|D830034L15Rik","carboxypeptidase D","protein-coding"]
[1306,"chr18",42055883,42056034,"+",0,"NA","intron (NM_172966, intron 1 of 7)","intron (NM_172966, intron 1 of 7)",2248,"NM_001146299",269016,"Mm.45472","NM_172966","ENSMUSG00000057719","Sh3rf2","2310046K19|9130023G24Rik|AI452083|Ppp1r39|RNF158","SH3 domain containing ring finger 2","protein-coding"]
[1939,"chr4",135568323,135568539,"+",0,"NA","intron (NM_001013756, intron 1 of 15)","intron (NM_001013756, intron 1 of 15)",5189,"NM_001013756",230824,"Mm.331972","NM_001013756","ENSMUSG00000037188","Grhl3","AI561912|Get1|Som|Tfcp2l4|ct","grainyhead-like 3 (Drosophila)","protein-coding"]
[1328,"chr18",62193227,62193489,"+",0,"NA","Intergenic","Intergenic",-13377,"NM_007420",11555,"Mm.5598","NM_007420","ENSMUSG00000045730","Adrb2","Adrb-2|Badm|Gpcr7","adrenergic receptor, beta 2","protein-coding"]
[73,"chr1",86469689,86473303,"+",0,"NA","Intergenic","B3|SINE|B2",45167,"NM_027966",71863,"Mm.179627","NM_027966","ENSMUSG00000036574","1700019O17Rik","-","RIKEN cDNA 1700019O17 gene","protein-coding"]
[409,"chr11",69072859,69073415,"+",0,"NA","3' UTR (NM_028336, exon 4 of 4)","3' UTR (NM_028336, exon 4 of 4)",2328,"NM_028336",66910,"Mm.33964","NM_025838","ENSMUSG00000020895","Tmem107","1110004B13Rik|2810049P21Rik","transmembrane protein 107","protein-coding"]
[1091,"chr16",29945839,29946293,"+",0,"NA","Intergenic","CpG",33058,"NR_037689",328657,"Mm.425982","NM_001033403",null,"Gm1968","-","predicted gene 1968","ncRNA"]
[67,"chr1",86433804,86436684,"+",0,"NA","Intergenic","Intergenic",8915,"NM_027966",71863,"Mm.179627","NM_027966","ENSMUSG00000036574","1700019O17Rik","-","RIKEN cDNA 1700019O17 gene","protein-coding"]
[812,"chr13",112126011,112126157,"+",0,"NA","Intergenic","MIR|SINE|MIR",-162367,"NM_001168403",77318,"Mm.159895","NM_029898","ENSMUSG00000049985","Ankrd55","C030011J08Rik","ankyrin repeat domain 55","protein-coding"]
[241,"chr10",31533161,31534674,"+",0,"NA","intron (NM_001146349, intron 2 of 5)","ORR1F|LTR|ERVL-MaLR",75808,"NM_001146349",268291,"Mm.295212","NM_001146349",null,"Rnf217","AU016819|Ibrdc1","ring finger protein 217","protein-coding"]
[1958,"chr4",141460019,141460333,"+",0,"NA","intron (NM_009541, intron 2 of 15)","intron (NM_009541, intron 2 of 15)",15503,"NM_009541",22642,"Mm.389590","NM_009541","ENSMUSG00000006215","Zbtb17","AA589413|Lp-1|Miz1|Zfp100|mZ13","zinc finger and BTB domain containing 17","protein-coding"]
[1962,"chr4",148774460,148774721,"+",0,"NA","Intergenic","Intergenic",-29802,"NM_001159344",69743,"Mm.233879","NM_027195","ENSMUSG00000028977","Casz1","2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e","castor zinc finger 1","protein-coding"]
[2561,"chr9",42108184,42108375,"+",0,"NA","intron (NM_011436, intron 1 of 47)","intron (NM_011436, intron 1 of 47)",16010,"NM_011436",20660,"Mm.121920","NM_011436",null,"Sorl1","2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA","sortilin-related receptor, LDLR class A repeats-containing","protein-coding"]
[489,"chr11",100408620,100408764,"+",0,"NA","TTS (NM_176830)","TTS (NM_176830)",6127,"NM_176830",66180,"Mm.4940","NM_176830","ENSMUSG00000006931","P3h4","1110036O03Rik|AI413214|Leprel4|Sc65","prolyl 3-hydroxylase family member 4 (non-enzymatic)","protein-coding"]
[585,"chr12",70556133,70556975,"+",0,"NA","intron (NR_037248, intron 2 of 4)","intron (NR_037248, intron 2 of 4)",103400,"NM_028339",72736,"Mm.204670","NM_028339","ENSMUSG00000021072","Tmx1","2810425A04Rik|AI465319|Txndc1","thioredoxin-related transmembrane protein 1","protein-coding"]
[327,"chr10",115833554,115834106,"+",0,"NA","intron (NM_146010, intron 3 of 7)","RLTR12BD_Mm|LTR|ERVK",16546,"NM_001168679",216350,"Mm.22270","NM_146010","ENSMUSG00000034127","Tspan8","C76990|E330007O21Rik|Tm4sf3","tetraspanin 8","protein-coding"]
[1392,"chr19",26090230,26092025,"+",0,"NA","Intergenic","L1MC4|LINE|L1",418716,"NM_145831",226049,"Mm.275572","NM_145831","ENSMUSG00000048138","Dmrt2","Terra","doublesex and mab-3 related transcription factor 2","protein-coding"]
[1970,"chr4",149171021,149172293,"+",0,"NA","Intergenic","Intergenic",-4950,"NM_001081274",110208,"Mm.252080","NM_025801","ENSMUSG00000028961","Pgd","0610042A05Rik|AU019875|C78335","phosphogluconate dehydrogenase","protein-coding"]
[2391,"chr7",133793855,133794840,"+",0,"NA","intron (NM_025850, intron 1 of 10)","intron (NM_025850, intron 1 of 10)",-11562,"NM_001286031",101437,"Mm.199223","NM_133941","ENSMUSG00000030986","Dhx32","3110079L04Rik|4732469F02Rik|AA408140|Ddx32","DEAH (Asp-Glu-Ala-His) box polypeptide 32","protein-coding"]
[1080,"chr16",25958481,25959043,"+",0,"NA","Intergenic","Intergenic",147022,"NM_173379",210530,"Mm.326869","NM_173379",null,"P3h2","4832416N06|AW553532|Leprel1|Mlat4","prolyl 3-hydroxylase 2","protein-coding"]
[1281,"chr18",20142115,20144921,"+",0,"NA","Intergenic","Intergenic",-28745,"NM_013504",13505,"Mm.33740","NM_013504",null,"Dsc1","1110020A10Rik|AI507491|Dsc1a|Dsc1b","desmocollin 1","protein-coding"]
[732,"chr13",46043048,46043502,"+",0,"NA","Intergenic","Intergenic",-78284,"NM_009124",20238,"Mm.342683","NM_009124","ENSMUSG00000046876","Atxn1","2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1","ataxin 1","protein-coding"]
[1864,"chr4",57313262,57313536,"+",0,"NA","Intergenic","Intergenic",-11562,"NM_011207",545622,"Mm.246552","NM_011207","ENSMUSG00000038764","Ptpn3","9530011I20Rik|PTP-H1|PTPCL","protein tyrosine phosphatase, non-receptor type 3","protein-coding"]
[2233,"chr6",129228445,129236265,"+",0,"NA","TTS (NR_040268)","TTS (NR_040268)",5690,"NR_040265",76432,"Mm.261738","NR_040265","ENSMUSG00000097354","2310001H17Rik","AI646108","RIKEN cDNA 2310001H17 gene","ncRNA"]
[1603,"chr2",139483112,139483296,"+",0,"NA","Intergenic","Lx6|LINE|L1",-10716,"NM_175467",228677,"Mm.100450","NM_175467","ENSMUSG00000039092","Sptlc3","C130053K05Rik","serine palmitoyltransferase, long chain base subunit 3","protein-coding"]
[622,"chr12",79597219,79597341,"+",0,"NA","intron (NM_009014, intron 7 of 10)","intron (NM_009014, intron 7 of 10)",299929,"NM_001252562",19363,"Mm.341756","NM_009014","ENSMUSG00000059060","Rad51b","AI553500|R51H2|Rad51l1|mREC2","RAD51 homolog B","protein-coding"]
[1881,"chr4",95383011,95383129,"+",0,"NA","Intergenic","Intergenic",-174437,"NM_001113412",75578,"Mm.276098","NM_029347","ENSMUSG00000028573","Fggy","2310009E04Rik","FGGY carbohydrate kinase domain containing","protein-coding"]
[970,"chr15",62042952,62043721,"+",0,"NA","intron (NR_132746, intron 1 of 6)","intron (NR_132746, intron 1 of 6)",4079,"NR_132746",19296,"Mm.4608","NM_011222","ENSMUSG00000097039","Pvt1","Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1","plasmacytoma variant translocation 1","ncRNA"]
[2381,"chr7",129764900,129765422,"+",0,"NA","Intergenic","MLT1K|LTR|ERVL-MaLR",173298,"NM_172255",207425,"Mm.229323","NM_172255","ENSMUSG00000042055","Wdr11","2900055P10Rik|AW489876|Brwd2|mKIAA1351","WD repeat domain 11","protein-coding"]
[2375,"chr7",128024732,128025020,"+",0,"NA","Intergenic","Lx8|LINE|L1",20498,"NM_001079932",434246,"Mm.389924","NM_001079932","ENSMUSG00000042828","Trim72","BC067209|MG53","tripartite motif-containing 72","protein-coding"]
[24,"chr1",40357973,40358831,"+",0,"NA","intron (NM_133193, intron 9 of 10)","RMER10A|LTR|ERVL",33775,"NM_133193",107527,"Mm.155583","NM_133193","ENSMUSG00000070942","Il1rl2","AI481289|AW551444|IL-1Rrp2","interleukin 1 receptor-like 2","protein-coding"]
[1416,"chr19",44281172,44281411,"+",0,"NA","Intergenic","Intergenic",-12385,"NM_009128",20250,"Mm.487021","NM_009128","ENSMUSG00000025203","Scd2","Mir5114|Scd-2|mir-5114|swty","stearoyl-Coenzyme A desaturase 2","protein-coding"]
[2256,"chr7",16005842,16006338,"+",0,"NA","Intergenic","Intergenic",-6595,"NM_001081418",243842,"Mm.440249","NM_001081418","ENSMUSG00000070808","Gltscr1","-","glioma tumor suppressor candidate region gene 1","protein-coding"]
[2049,"chr5",98845849,98846035,"+",0,"NA","Intergenic","Intergenic",-8473,"NM_173404",110075,"Mm.136461","NM_173404","ENSMUSG00000029335","Bmp3","9530029I04Rik","bone morphogenetic protein 3","protein-coding"]
[1658,"chr2",170146898,170147623,"+",0,"NA","Intergenic","Intergenic",-4585,"NM_001159683",228913,"Mm.22858","NM_001033299","ENSMUSG00000052056","Zfp217","4933431C08Rik|AW987152|Gm562|ZABC1|Znf217","zinc finger protein 217","protein-coding"]
[104,"chr1",125549461,125549619,"+",0,"NA","Intergenic","B4|SINE|B4",-11476,"NM_028787",74150,"Mm.28654","NM_028787","ENSMUSG00000026342","Slc35f5","1300003P13Rik|AI646727","solute carrier family 35, member F5","protein-coding"]
[2057,"chr5",103732571,103733225,"+",0,"NA","Intergenic","Intergenic",-21264,"NM_133919",17355,"Mm.6949","NM_133919","ENSMUSG00000029313","Aff1","9630032B01Rik|AW319193|Af4|Mllt2h|Rob","AF4/FMR2 family, member 1","protein-coding"]
[1558,"chr2",90612633,90613139,"+",0,"NA","Intergenic","Intergenic",-32239,"NM_008982",19271,"Mm.330393","NM_008982","ENSMUSG00000025314","Ptprj","AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1","protein tyrosine phosphatase, receptor type, J","protein-coding"]
[1237,"chr17",71653380,71653570,"+",0,"NA","exon (NM_175639, exon 16 of 18)","exon (NM_175639, exon 16 of 18)",11836,"NR_028551",100217456,null,"NR_028551","ENSMUSG00000092887","Snord53","MBII-35","small nucleolar RNA, C/D box 53","snoRNA"]
[1635,"chr2",160620357,160620901,"+",0,"NA","Intergenic","Intergenic",-25268,"NM_009408",21969,"Mm.217233","NM_009408","ENSMUSG00000070544","Top1","AI467334|D130064I21Rik|Top-1","topoisomerase (DNA) I","protein-coding"]
[2361,"chr7",111154503,111158299,"+",0,"NA","Intergenic","Intergenic",-33726,"NR_015573",75479,"Mm.381620","NR_015573",null,"1700012D14Rik","-","RIKEN cDNA 1700012D14 gene","ncRNA"]
[2175,"chr6",88926035,88926533,"+",0,"NA","Intergenic","L2a|LINE|L2",24033,"NM_011906",24100,"Mm.284480","NM_011906","ENSMUSG00000002871","Tpra1","40kDa|Gpr175|Tpra40","transmembrane protein, adipocyte asscociated 1","protein-coding"]
[1513,"chr2",49811573,49812656,"+",0,"NA","intron (NM_027990, intron 1 of 9)","intron (NM_027990, intron 1 of 9)",24428,"NM_027990",71897,"Mm.41381","NM_027990","ENSMUSG00000026765","Lypd6b","2310010M24Rik|AW049525","LY6/PLAUR domain containing 6B","protein-coding"]
[1264,"chr17",88256863,88257050,"+",0,"NA","Intergenic","MIRb|SINE|MIR",131444,"NM_001190356",225058,"Mm.312053","NM_001190356",null,"Gm4832","EG225058","predicted gene 4832","protein-coding"]
[2490,"chr8",95513120,95513865,"+",0,"NA","Intergenic","Intergenic",-20608,"NM_172914",244608,"Mm.248902","NM_172914","ENSMUSG00000036598","Ccdc113","4933409I22|BC060957","coiled-coil domain containing 113","protein-coding"]
[747,"chr13",55182227,55182765,"+",0,"NA","Intergenic","Intergenic",-27286,"NM_008739",18193,"Mm.12964","NM_008739","ENSMUSG00000021488","Nsd1","AI528500|KMT3B","nuclear receptor-binding SET-domain protein 1","protein-coding"]
[159,"chr1",156615783,156617942,"+",0,"NA","intron (NM_001136104, intron 1 of 12)","intron (NM_001136104, intron 1 of 12)",57477,"NM_023141",30935,"Mm.206737","NM_023141","ENSMUSG00000060519","Tor3a","Adir","torsin family 3, member A","protein-coding"]
[2563,"chr9",42188205,42188927,"+",0,"NA","intron (NR_040754, intron 5 of 6)","intron (NR_040754, intron 5 of 6)",20665,"NR_040754",78194,"Mm.251457","NR_040754",null,"4930546K05Rik","-","RIKEN cDNA 4930546K05 gene","ncRNA"]
[1633,"chr2",157447740,157448374,"+",0,"NA","intron (NM_001025395, intron 2 of 13)","B3A|SINE|B2",23764,"NM_001025395",20779,"Mm.22845","NM_009271","ENSMUSG00000027646","Src","AW259666|pp60c-src","Rous sarcoma oncogene","protein-coding"]
[47,"chr1",71395591,71396052,"+",0,"NA","intron (NM_175210, intron 2 of 52)","intron (NM_175210, intron 2 of 52)",19089,"NM_175210",74591,"Mm.159251","NM_175210","ENSMUSG00000050296","Abca12","4832428G11Rik|4833417A11Rik","ATP-binding cassette, sub-family A (ABC1), member 12","protein-coding"]
[1427,"chr19",47708332,47710230,"+",0,"NA","Intergenic","Intergenic",-17239,"NM_001290825",12821,"Mm.1225","NM_007732","ENSMUSG00000025064","Col17a1","BP180|Bpag|Bpag2","collagen, type XVII, alpha 1","protein-coding"]
[1942,"chr4",135661753,135662113,"+",0,"NA","Intergenic","Intergenic",-24524,"NM_174851",242700,"Mm.259623","NM_174851","ENSMUSG00000062157","Ifnlr1","CRF2-12|Il28ra","interferon lambda receptor 1","protein-coding"]
[1484,"chr2",31122947,31123339,"+",0,"NA","intron (NM_001177648, intron 1 of 16)","B1_Mus1|SINE|Alu",18865,"NM_001177649",14269,"Mm.52297","NM_019406","ENSMUSG00000075415","Fnbp1","1110057E06Rik|2210010H06Rik|FBP1|Fbp17","formin binding protein 1","protein-coding"]
[1017,"chr15",99817251,99818524,"+",0,"NA","intron (NM_001113545, intron 4 of 10)","IMPB_01|Satellite|Satellite",2262,"NM_023063",65970,"Mm.33207","NM_023063","ENSMUSG00000023022","Lima1","Eplin","LIM domain and actin binding 1","protein-coding"]
[270,"chr10",67380041,67380564,"+",0,"NA","Intergenic","Intergenic",-95021,"NM_001036293",641340,"Mm.136223","NM_001036293","ENSMUSG00000075000","Nrbf2","NRBF-2","nuclear receptor binding factor 2","protein-coding"]
[1057,"chr16",21382503,21383062,"+",0,"NA","Intergenic","Intergenic",-40336,"NM_001285893",209018,"Mm.235683","NM_145948","ENSMUSG00000033653","Vps8","AI315068|AU040738|mKIAA0804","vacuolar protein sorting 8 homolog (S. cerevisiae)","protein-coding"]
[2042,"chr5",77156065,77156732,"+",0,"NA","Intergenic","L1M4|LINE|L1",-41275,"NM_175606",74318,"Mm.181852","NM_175606","ENSMUSG00000059325","Hopx","1110018K11Rik|1200015P04Rik|2300002F06Rik|AI848177|AW490897|Cameo|Hdop|Hod|Hop|Ob1|Obl|Toto","HOP homeobox","protein-coding"]
[538,"chr12",8640857,8641010,"+",0,"NA","Intergenic","CpG",-33201,"NM_001160221",80913,"Mm.341243","NM_030723","ENSMUSG00000020594","Pum2","5730503J23Rik|Pumm2","pumilio RNA-binding family member 2","protein-coding"]
[1602,"chr2",138282429,138282673,"+",0,"NA","intron (NM_145534, intron 3 of 3)","intron (NM_145534, intron 3 of 3)",4058,"NM_145534",228662,"Mm.153405","NM_145534","ENSMUSG00000062098","Btbd3","mKIAA0952","BTB (POZ) domain containing 3","protein-coding"]
[521,"chr11",116913363,116913772,"+",0,"NA","Intergenic","Intergenic",-5296,"NM_172948",268510,"Mm.35141","NM_172948","ENSMUSG00000043857","Mgat5b","C330018B01|GnT-IX|mGnTVB","mannoside acetylglucosaminyltransferase 5, isoenzyme B","protein-coding"]
[2007,"chr5",43024444,43025143,"+",0,"NA","Intergenic","Intergenic",-208670,"NM_175937",231207,"Mm.7233","NM_175937","ENSMUSG00000039782","Cpeb2","A630055H10Rik|Cpe-bp2","cytoplasmic polyadenylation element binding protein 2","protein-coding"]
[1332,"chr18",65573427,65573937,"+",0,"NA","intron (NR_105742, intron 1 of 6)","intron (NR_105742, intron 1 of 6)",-6548,"NM_207255",328977,"Mm.286232","NM_207255","ENSMUSG00000042439","Zfp532","C530030I18Rik|Znf532|mKIAA1629","zinc finger protein 532","protein-coding"]
[162,"chr1",159221294,159221967,"+",0,"NA","Intergenic","Intergenic",-10696,"NM_011931",26374,"Mm.328135","NM_011931","ENSMUSG00000040782","Rfwd2","AI316802|C80879|Cop1","ring finger and WD repeat domain 2","protein-coding"]
[1923,"chr4",129234705,129234860,"+",0,"NA","intron (NM_001285867, intron 1 of 6)","MIRc|SINE|MIR",4436,"NM_001285865",97130,"Mm.331907","NM_001033189","ENSMUSG00000050390","C77080","Kiaa1522|mKIAA1522","expressed sequence C77080","protein-coding"]
[880,"chr14",99578195,99580536,"+",0,"NA","Intergenic","Intergenic",280674,"NM_009769",12224,"Mm.30262","NM_009769","ENSMUSG00000005148","Klf5","4930520J07Rik|Bteb2|CKLF|IKLF","Kruppel-like factor 5","protein-coding"]
[433,"chr11",83457451,83457810,"+",0,"NA","intron (NM_172797, intron 1 of 7)","intron (NM_172797, intron 1 of 7)",5331,"NM_172797",118453,"Mm.264648","NM_080453","ENSMUSG00000020682","Mmp28","D130023P12","matrix metallopeptidase 28 (epilysin)","protein-coding"]
[2164,"chr6",67015127,67015916,"+",0,"NA","intron (NM_001177560, intron 3 of 4)","intron (NM_001177560, intron 3 of 4)",-21078,"NR_040278",320172,"Mm.449039","NR_040278","ENSMUSG00000087231","E230016M11Rik","-","RIKEN cDNA E230016M11 gene","ncRNA"]
[1399,"chr19",32264388,32265071,"+",0,"NA","intron (NM_001168525, intron 2 of 9)","ERVL-int|LTR|ERVL",-53716,"NM_001168526",208449,"Mm.329810","NM_144792","ENSMUSG00000040451","Sgms1","9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23","sphingomyelin synthase 1","protein-coding"]
[1912,"chr4",125122089,125122469,"+",0,"NA","exon (NM_153159, exon 3 of 6)","exon (NM_153159, exon 3 of 6)",5602,"NM_153159",230738,"Mm.402","NM_153159","ENSMUSG00000042677","Zc3h12a","BC036563|MCPIP|Mcpip1","zinc finger CCCH type containing 12A","protein-coding"]
[986,"chr15",80096079,80096959,"+",0,"NA","intron (NM_009303, intron 1 of 3)","B4A|SINE|B4",5185,"NM_207708",20972,"Mm.230301","NM_009303","ENSMUSG00000022415","Syngr1","R75468|Syngr1b|p29","synaptogyrin 1","protein-coding"]
[786,"chr13",91326560,91326883,"+",0,"NA","Intergenic","Intergenic",61364,"NR_045161",320297,"Mm.375866","NR_045161","ENSMUSG00000097182","A830009L08Rik","-","RIKEN cDNA A830009L08 gene","ncRNA"]
[740,"chr13",49402428,49402628,"+",0,"NA","Intergenic","Intergenic",-18695,"NR_075085",75678,"Mm.390586","NM_199056","ENSMUSG00000021385","Ippk","1810043M15Rik|InsP6","inositol 1,3,4,5,6-pentakisphosphate 2-kinase","protein-coding"]
[1117,"chr16",57452743,57453018,"+",0,"NA","intron (NM_001040397, intron 1 of 4)","MIRc|SINE|MIR",-96362,"NM_001177871",78749,"Mm.328360","NM_001040397","ENSMUSG00000043336","Filip1l","4631422O05Rik|Doc1","filamin A interacting protein 1-like","protein-coding"]
[1008,"chr15",96844953,96845650,"+",0,"NA","Intergenic","Intergenic",-145603,"NM_175121",67760,"Mm.46754","NM_175121","ENSMUSG00000022462","Slc38a2","5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382","solute carrier family 38, member 2","protein-coding"]
[103,"chr1",125536998,125537982,"+",0,"NA","Intergenic","Intergenic",-23526,"NM_028787",74150,"Mm.28654","NM_028787","ENSMUSG00000026342","Slc35f5","1300003P13Rik|AI646727","solute carrier family 35, member F5","protein-coding"]
[201,"chr1",191185888,191186461,"+",0,"NA","Intergenic","Intergenic",-2841,"NM_007498",11910,"Mm.2706","NM_007498","ENSMUSG00000026628","Atf3","LRG-21","activating transcription factor 3","protein-coding"]
[871,"chr14",73449675,73451460,"+",0,"NA","Intergenic","Intergenic",-59482,"NM_026119",67381,"Mm.282888","NM_026119","ENSMUSG00000022109","Med4","2410046H15Rik|DRIP36|HSPC126|TRAP36|Vdirp|Vdrip","mediator complex subunit 4","protein-coding"]
[1401,"chr19",32273460,32274840,"+",0,"NA","intron (NM_001168525, intron 2 of 9)","intron (NM_001168525, intron 2 of 9)",-63137,"NM_001168526",208449,"Mm.329810","NM_144792","ENSMUSG00000040451","Sgms1","9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23","sphingomyelin synthase 1","protein-coding"]
[719,"chr13",39927657,39929271,"+",0,"NA","Intergenic","Intergenic",359547,"NM_172143",218165,"Mm.364096","NM_172143","ENSMUSG00000047094","Ofcc1","opo","orofacial cleft 1 candidate 1","protein-coding"]
[1529,"chr2",60901281,60902598,"+",0,"NA","intron (NM_020296, intron 1 of 13)","intron (NM_020296, intron 1 of 13)",-20501,"NM_001141931",56878,"Mm.259667","NM_020296","ENSMUSG00000026970","Rbms1","2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1","RNA binding motif, single stranded interacting protein 1","protein-coding"]
[902,"chr14",118179616,118180092,"+",0,"NA","Intergenic","Intergenic",42727,"NM_021434",58245,"Mm.275411","NM_021434","ENSMUSG00000022131","Gpr180","AB041545|E130016I23Rik|Itr","G protein-coupled receptor 180","protein-coding"]
[827,"chr14",20848102,20848475,"+",0,"NA","Intergenic","Intergenic",11626,"NM_008873",18792,"Mm.4183","NM_008873","ENSMUSG00000021822","Plau","u-PA|uPA","plasminogen activator, urokinase","protein-coding"]
[266,"chr10",66928523,66928655,"+",0,"NA","Intergenic","Intergenic",-76486,"NR_110511",102634101,"Mm.445258","NR_110511",null,"Gm31763","-","predicted gene, 31763","ncRNA"]
[2039,"chr5",72917306,72917444,"+",0,"NA","intron (NM_153567, intron 1 of 8)","intron (NM_153567, intron 1 of 8)",3013,"NM_153567",75991,"Mm.121285","NM_153567","ENSMUSG00000036087","Slain2","5033405K12Rik|8030444K12Rik|AI596370","SLAIN motif family, member 2","protein-coding"]
[1353,"chr19",4419005,4422190,"+",0,"NA","Intergenic","Intergenic",-18726,"NR_045990",319314,"Mm.393810","NR_045989","ENSMUSG00000087132","A930001C03Rik","-","RIKEN cDNA A930001C03 gene","ncRNA"]
[1742,"chr3",94780582,94781088,"+",0,"NA","intron (NM_001293727, intron 1 of 20)","ID2|SINE|ID",5680,"NM_001293727",70737,"Mm.87634","NM_001037711","ENSMUSG00000068876","Cgn","6330408J11Rik","cingulin","protein-coding"]
[2585,"chr9",44486744,44487027,"+",0,"NA","Intergenic","Intergenic",-12251,"NM_030256",80288,"Mm.370270","NM_030256","ENSMUSG00000063382","Bcl9l","B9L|BC003321|BCL9-2|DLNB11","B cell CLL/lymphoma 9-like","protein-coding"]
[1624,"chr2",151962955,151963137,"+",0,"NA","Intergenic","Intergenic",4571,"NR_035478",100316704,null,"NR_035478","ENSMUSG00000088491","Mir1953","mir-1953|mmu-mir-1953","microRNA 1953","ncRNA"]
[1219,"chr17",46858195,46858704,"+",0,"NA","Intergenic","Intergenic",-27036,"NM_001100452",210982,"Mm.37642","NM_001100452","ENSMUSG00000036568","Gltscr1l","mKIAA0240","GLTSCR1-like","protein-coding"]
[1695,"chr3",58371477,58372287,"+",0,"NA","Intergenic","Intergenic",-43807,"NM_001081229",72033,"Mm.218409","NM_028067","ENSMUSG00000027806","Tsc22d2","1810043J12Rik|5530402M19Rik","TSC22 domain family, member 2","protein-coding"]
[2534,"chr8",126665074,126666328,"+",0,"NA","Intergenic","Intergenic",-72265,"NM_001164598",270110,"Mm.334918","NM_001164598","ENSMUSG00000051495","Irf2bp2","E130305N23Rik|IRF-2BP2","interferon regulatory factor 2 binding protein 2","protein-coding"]
[97,"chr1",120125224,120125367,"+",0,"NA","intron (NM_001172074, intron 1 of 4)","Lx8|LINE|L1",4108,"NM_001172074",73103,"Mm.271602","NM_028439","ENSMUSG00000026388","3110009E18Rik","-","RIKEN cDNA 3110009E18 gene","protein-coding"]
[2378,"chr7",128553856,128554534,"+",0,"NA","Intergenic","Intergenic",30612,"NM_013863",29810,"Mm.84073","NM_013863","ENSMUSG00000030847","Bag3","AA407278|Bis|mg638","BCL2-associated athanogene 3","protein-coding"]
[1704,"chr3",79397562,79397725,"+",0,"NA","intron (NM_001142953, intron 1 of 4)","intron (NM_001142953, intron 1 of 4)",52267,"NM_001142953",100233207,"Mm.373801","NM_001142953","ENSMUSG00000091685","Gm17359","-","predicted gene, 17359","protein-coding"]
[668,"chr12",119389595,119391168,"+",0,"NA","Intergenic","Intergenic",-53029,"NM_001163136",238455,"Mm.31376","NM_001163136","ENSMUSG00000041886","Macc1","4732474O15Rik|Gm267","metastasis associated in colon cancer 1","protein-coding"]
[750,"chr13",56004454,56004715,"+",0,"NA","Intergenic","Intergenic",130966,"NM_012015",26914,"Mm.283802","NM_012015","ENSMUSG00000015937","H2afy","H2AF12M|mH2a1|macroH2A1","H2A histone family, member Y","protein-coding"]
[688,"chr13",30110041,30110290,"+",0,"NA","Intergenic","L1_Rod|LINE|L1",-26325,"NM_153546",218121,"Mm.89682","NM_153546","ENSMUSG00000038732","Mboat1","9130215M02Rik|BC023845|LPEAT1|Moact1|Oact1","membrane bound O-acyltransferase domain containing 1","protein-coding"]
[1749,"chr3",95877281,95877818,"+",0,"NA","TTS (NM_001033302)","TTS (NM_001033302)",4679,"NM_001033302",229599,"Mm.331218","NM_001033302","ENSMUSG00000038550","Ciart","Chrono|Gm129","circadian associated repressor of transcription","protein-coding"]
[774,"chr13",74821275,74822061,"+",0,"NA","Intergenic","Intergenic",-12908,"NM_001301153",12380,"Mm.29163","NM_009817",null,"Cast","-","calpastatin","protein-coding"]
[1126,"chr16",77642646,77644830,"+",0,"NA","Intergenic","Intergenic",-2535,"NR_029540",723952,null,"NR_029540","ENSMUSG00000065472","Mir125b-2","Mirn125b-2|mir-125b-2","microRNA 125b-2","ncRNA"]
[2128,"chr6",28228529,28228749,"+",0,"NA","Intergenic","Intergenic",32962,"NM_001081678",627049,"Mm.84441","NM_001081678","ENSMUSG00000039841","Zfp800","AA407452|Znf800","zinc finger protein 800","protein-coding"]
[910,"chr14",120307667,120307777,"+",0,"NA","intron (NM_175341, intron 1 of 8)","intron (NM_175341, intron 1 of 8)",32053,"NM_175341",105559,"Mm.238266","NM_175341","ENSMUSG00000022139","Mbnl2","1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072","muscleblind-like 2","protein-coding"]
[2701,"chr9",111104359,111105046,"+",0,"NA","Intergenic","Intergenic",-13409,"NM_027742",71268,"Mm.302287","NM_027742","ENSMUSG00000032497","Lrrfip2","5133400F20Rik|AI850587","leucine rich repeat (in FLII) interacting protein 2","protein-coding"]
[693,"chr13",30664811,30666867,"+",0,"NA","intron (NM_001037955, intron 1 of 6)","intron (NM_001037955, intron 1 of 6)",5780,"NM_134068",105352,"Mm.289646","NM_134068","ENSMUSG00000069255","Dusp22","JKAP|JSP1|LMW-DSP2|MKPX","dual specificity phosphatase 22","protein-coding"]
[1341,"chr18",73541427,73542624,"+",0,"NA","Intergenic","Intergenic",-30680,"NM_001039214",240396,"Mm.24131","NM_001039214","ENSMUSG00000037253","Mex3c","A130001D14Rik|BC035207|BM-013|Rkhd2","mex3 homolog C (C. elegans)","protein-coding"]
[2684,"chr9",104087458,104088467,"+",0,"NA","intron (NM_175324, intron 9 of 19)","intron (NM_175324, intron 9 of 19)",24259,"NM_175324",102632,"Mm.41274","NM_175324","ENSMUSG00000090150","Acad11","5730439E10Rik|AI987948","acyl-Coenzyme A dehydrogenase family, member 11","protein-coding"]
[1534,"chr2",71800773,71801417,"+",0,"NA","intron (NM_001277970, intron 1 of 24)","intron (NM_001277970, intron 1 of 24)",14156,"NM_001277970",16403,"Mm.225096","NM_008397",null,"Itga6","5033401O05Rik|AI115430|Cd49f|VLA-6","integrin alpha 6","protein-coding"]
[2570,"chr9",43144818,43144946,"+",0,"NA","intron (NM_011139, intron 5 of 12)","B1F|SINE|Alu",-28312,"NM_001034863",235300,"Mm.261326","NM_001034863","ENSMUSG00000048503","Tmem136","AA396355|Gm184","transmembrane protein 136","protein-coding"]
[893,"chr14",101870912,101871022,"+",0,"NA","intron (NM_201529, intron 4 of 30)","intron (NM_201529, intron 4 of 30)",141039,"NM_201529",380928,"Mm.218981","NM_201529","ENSMUSG00000033060","Lmo7","C78582|FBXO20|Gm914|mKIAA0858","LIM domain only 7","protein-coding"]
[2309,"chr7",67503625,67504484,"+",0,"NA","Intergenic","Intergenic",-131196,"NM_001291195",17258,"Mm.132788","NM_001033713","ENSMUSG00000030557","Mef2a","A430079H05Rik","myocyte enhancer factor 2A","protein-coding"]
[1915,"chr4",127326880,127327340,"+",0,"NA","intron (NM_001160012, intron 1 of 1)","B1_Mus1|SINE|Alu",2015,"NM_008126",14620,"Mm.90003","NM_008126","ENSMUSG00000042367","Gjb3","Cnx31|Cx31|D4Wsu144e|Gjb-3","gap junction protein, beta 3","protein-coding"]
[804,"chr13",110882468,110883125,"+",0,"NA","non-coding (NR_131194, exon 3 of 3)","non-coding (NR_131194, exon 3 of 3)",-20703,"NR_131193",75139,"Mm.490931","NR_131193",null,"Gm38397","-","predicted gene, 38397","ncRNA"]
[83,"chr1",93748871,93749062,"+",0,"NA","intron (NM_025920, intron 2 of 5)","intron (NM_025920, intron 2 of 5)",5872,"NM_025920",67026,"Mm.272356","NM_025920","ENSMUSG00000026279","Thap4","2010320B01Rik","THAP domain containing 4","protein-coding"]
[2558,"chr9",32117593,32118691,"+",0,"NA","intron (NM_001195632, intron 1 of 21)","intron (NM_001195632, intron 1 of 21)",2006,"NM_001195632",330914,"Mm.46683","NM_177379","ENSMUSG00000041444","Arhgap32","3426406O18Rik|Gc-gap|Grit|Px-rics|Rics|mKIAA0712|p200Rhogap|p250Gap","Rho GTPase activating protein 32","protein-coding"]
[1385,"chr19",22264996,22266211,"+",0,"NA","intron (NM_001035239, intron 1 of 24)","L1MC1|LINE|L1",126486,"NM_001035242",226025,"Mm.131943","NM_177341","ENSMUSG00000052387","Trpm3","6330504P12Rik|9330180E14|AU018608|B930001P07Rik|LTRPC3|MLSN2","transient receptor potential cation channel, subfamily M, member 3","protein-coding"]
[2672,"chr9",99136511,99137577,"+",0,"NA","intron (NM_029094, intron 1 of 23)","intron (NM_029094, intron 1 of 23)",3167,"NM_029094",74769,"Mm.213128","NM_029094",null,"Pik3cb","1110001J02Rik|AI447572|p110beta","phosphatidylinositol 3-kinase, catalytic, beta polypeptide","protein-coding"]
[1818,"chr4",8904864,8905219,"+",0,"NA","Intergenic","Intergenic",214635,"NM_001277149",320790,"Mm.138792","NM_001033395","ENSMUSG00000041235","Chd7","A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis","chromodomain helicase DNA binding protein 7","protein-coding"]
[2094,"chr5",135878809,135880326,"+",0,"NA","Intergenic","Intergenic",-8352,"NM_013560",15507,"Mm.13849","NM_013560","ENSMUSG00000004951","Hspb1","27kDa|Hsp25","heat shock protein 1","protein-coding"]
[962,"chr15",59519414,59519779,"+",0,"NA","intron (NM_026746, intron 4 of 6)","(TATATG)n|Simple_repeat|Simple_repeat",-129058,"NM_144549",211770,"Mm.40298","NM_144549","ENSMUSG00000032501","Trib1","A530090O15Rik|TRB-1|Trb1","tribbles homolog 1 (Drosophila)","protein-coding"]
[755,"chr13",63065064,63065394,"+",0,"NA","intron (NM_001289924, intron 4 of 16)","intron (NM_001289924, intron 4 of 16)",100336,"NM_001289924",72061,"Mm.188105","NM_028079","ENSMUSG00000021458","2010111I01Rik","2300006M17Rik|AP-O|Aopep|mir-23b|mir-24-1|mir-27b","RIKEN cDNA 2010111I01 gene","protein-coding"]
[1085,"chr16",26433871,26434471,"+",0,"NA","Intergenic","Intergenic",-28964,"NM_053241",114141,"Mm.275205","NM_053241","ENSMUSG00000038148","Cldn16","PCLN1|claudin-16","claudin 16","protein-coding"]
[1714,"chr3",85978570,85979099,"+",0,"NA","Intergenic","L1MC3|LINE|L1",23657,"NM_001001650",368202,"Mm.253822","NM_001001650","ENSMUSG00000049013","Prss48","Esspl|Gm1019","protease, serine 48","protein-coding"]
[1837,"chr4",35005857,35006010,"+",0,"NA","intron (NM_178061, intron 2 of 3)","intron (NM_178061, intron 2 of 3)",-94452,"NR_040652",73696,"Mm.1361","NR_040652","ENSMUSG00000085824","Platr9","2410114N07Rik","pluripotency associated transcript 9","ncRNA"]
[143,"chr1",138357139,138358936,"+",0,"NA","Intergenic","Intergenic",84299,"NM_177397",338375,"Mm.114424","NM_177397","ENSMUSG00000026394","Atp6v1g3","-","ATPase, H+ transporting, lysosomal V1 subunit G3","protein-coding"]
[1403,"chr19",32974565,32974675,"+",0,"NA","Intergenic","Intergenic",217043,"NM_008960",19211,"Mm.245395","NM_008960","ENSMUSG00000013663","Pten","2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|TEP1","phosphatase and tensin homolog","protein-coding"]
[2323,"chr7",75426610,75427887,"+",0,"NA","Intergenic","CT-rich|Low_complexity|Low_complexity",-28286,"NM_029332",75547,"Mm.216107","NM_029332","ENSMUSG00000066406","Akap13","1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC","A kinase (PRKA) anchor protein 13","protein-coding"]
[1051,"chr16",20438705,20438997,"+",0,"NA","Intergenic","MTD|LTR|ERVL-MaLR",-12457,"NM_176839",27416,"Mm.20845","NM_013790","ENSMUSG00000022822","Abcc5","2900011L11Rik|AI132311|Abcc5a|Abcc5b|Mrp5","ATP-binding cassette, sub-family C (CFTR/MRP), member 5","protein-coding"]
[2268,"chr7",25208659,25209097,"+",0,"NA","intron (NM_207677, intron 4 of 4)","intron (NM_207677, intron 4 of 4)",8847,"NR_106015",102466794,null,"NR_106015","ENSMUSG00000098325","Mir7048","Gm27274|mmu-mir-7048","microRNA 7048","ncRNA"]
[1497,"chr2",32899347,32900361,"+",0,"NA","intron (NM_146119, intron 1 of 13)","intron (NM_146119, intron 1 of 13)",23720,"NM_146119",227737,"Mm.301646","NM_146119","ENSMUSG00000026796","Fam129b","9130404D14Rik","family with sequence similarity 129, member B","protein-coding"]
[518,"chr11",116027376,116027664,"+",0,"NA","Intergenic","PB1D10|SINE|Alu",-2796,"NM_001286006",217331,"Mm.297706","NM_172569","ENSMUSG00000020770","Unk","B230379M23Rik|Zc3h5|Zc3hdc5|mKIAA1753","unkempt homolog (Drosophila)","protein-coding"]
[497,"chr11",102467423,102468285,"+",0,"NA","exon (NM_010575, exon 2 of 30)","exon (NM_010575, exon 2 of 30)",2029,"NM_010575",16399,"Mm.26646","NM_010575","ENSMUSG00000034664","Itga2b","AI172977|CD41|CD41B|GpIIb|alphaIIb","integrin alpha 2b","protein-coding"]
[1211,"chr17",36025268,36025398,"+",0,"NA","intron (NR_015618, intron 1 of 1)","MTE2a|LTR|ERVL-MaLR",-4773,"NM_008207",15042,"Mm.439654","NM_008207","ENSMUSG00000053835","H2-T24","H-2T24","histocompatibility 2, T region locus 24","protein-coding"]
[2732,"chrX",51059090,51059288,"+",0,"NA","Intergenic","Intergenic",-41171,"NM_172413",72065,"Mm.43152","NM_172413","ENSMUSG00000050029","Rap2c","2010200P20Rik|AI194294|AL022976","RAP2C, member of RAS oncogene family","protein-coding"]
[2155,"chr6",53779811,53779976,"+",0,"NA","Intergenic","Intergenic",40932,"NM_025817",66873,"Mm.422727","NM_025817","ENSMUSG00000043496","Tril","1200009O22Rik|AI316813|mKIAA0644","TLR4 interactor with leucine-rich repeats","protein-coding"]
[169,"chr1",162509666,162509883,"+",0,"NA","Intergenic","Intergenic",-31740,"NM_172646",103967,"Mm.441620","NM_172646","ENSMUSG00000040265","Dnm3","9630020E24Rik|AW061159|B230343F03Rik|C530045C17|mKIAA0820","dynamin 3","protein-coding"]
[411,"chr11",69094214,69094704,"+",0,"NA","Intergenic","MIRb|SINE|MIR",-4497,"NM_011065",18626,"Mm.7373","NM_011065","ENSMUSG00000020893","Per1","Per|m-rigui|mPer1","period circadian clock 1","protein-coding"]
[2399,"chr7",141911090,141911405,"+",0,"NA","Intergenic","Intergenic",-8841,"NM_023764",54473,"Mm.103551","NM_023764","ENSMUSG00000025139","Tollip","4930403G24Rik|4931428G15Rik","toll interacting protein","protein-coding"]
[1542,"chr2",75613451,75613843,"+",0,"NA","Intergenic","Intergenic",-45612,"NM_146130",229279,"Mm.316306","NM_053263","ENSMUSG00000059005","Hnrnpa3","2410013L13Rik|2610209F03Rik|2610510D13Rik|Hnrpa3","heterogeneous nuclear ribonucleoprotein A3","protein-coding"]
[1711,"chr3",85005552,85005820,"+",0,"NA","Intergenic","Intergenic",-40106,"NM_001040461",654362,"Mm.466598","NM_001040461",null,"Dear1","Dear|Despr","dual endothelin 1/angiotensin II receptor 1","protein-coding"]
[2102,"chr5",143511123,143513601,"+",0,"NA","intron (NM_009007, intron 3 of 5)","intron (NM_009007, intron 3 of 5)",15631,"NM_009007",19353,"Mm.292510","NM_009007","ENSMUSG00000001847","Rac1","AL023026|D5Ertd559e","RAS-related C3 botulinum substrate 1","protein-coding"]
[2579,"chr9",43771907,43774672,"+",0,"NA","intron (NM_021424, intron 1 of 5)","intron (NM_021424, intron 1 of 5)",28713,"NM_021424",58235,"Mm.335096","NM_021424","ENSMUSG00000032012","Pvrl1","AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|nectin-1","poliovirus receptor-related 1","protein-coding"]
[478,"chr11",99109191,99109852,"+",0,"NA","Intergenic","Intergenic",-20215,"NM_172564",217169,"Mm.262067","NM_172564","ENSMUSG00000017607","Tns4","9930017A07Rik|AA589547|AU016405|Cten","tensin 4","protein-coding"]
[384,"chr11",53332536,53332685,"+",0,"NA","3' UTR (NM_026479, exon 4 of 4)","3' UTR (NM_026479, exon 4 of 4)",7921,"NM_026479",67966,"Mm.288072","NM_026479","ENSMUSG00000018239","Zcchc10","2410141K03Rik|AA675321|D11Ertd416e","zinc finger, CCHC domain containing 10","protein-coding"]
[398,"chr11",61636815,61638722,"+",0,"NA","Intergenic","B1_Mus1|SINE|Alu",-15553,"NM_027817",71520,"Mm.202760","NM_027817","ENSMUSG00000004837","Grap","8430435N19Rik|BB233594","GRB2-related adaptor protein","protein-coding"]
[836,"chr14",34207235,34207927,"+",0,"NA","Intergenic","Intergenic",-5948,"NM_183209",432839,"Mm.294643","NM_183209","ENSMUSG00000071531","Gprin2","C130040D06Rik|C230073P13|Gm286|mKIAA0514","G protein regulated inducer of neurite outgrowth 2","protein-coding"]
[2016,"chr5",53953937,53954249,"+",0,"NA","Intergenic","Intergenic",-44430,"NM_001081103",116873,"Mm.265985","NM_054083","ENSMUSG00000039156","Stim2","-","stromal interaction molecule 2","protein-coding"]
[955,"chr15",59411046,59413364,"+",0,"NA","intron (NM_026746, intron 2 of 6)","intron (NM_026746, intron 2 of 6)",38007,"NM_001164604",68501,"Mm.27762","NM_026746","ENSMUSG00000059586","Nsmce2","1110014D18Rik|AI661537","non-SMC element 2 homolog (MMS21, S. cerevisiae)","protein-coding"]
[942,"chr15",37282158,37282330,"+",0,"NA","intron (NM_026496, intron 4 of 15)","intron (NM_026496, intron 4 of 15)",49208,"NM_026496",252973,"Mm.244612","NM_026496","ENSMUSG00000022286","Grhl2","0610015A08Rik|BOM|Tcfcp2l3","grainyhead-like 2 (Drosophila)","protein-coding"]
[1735,"chr3",93552451,93552666,"+",0,"NA","Intergenic","Intergenic",-2559,"NM_009112",20194,"Mm.1","NM_009112","ENSMUSG00000041959","S100a10","42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11","S100 calcium binding protein A10 (calpactin)","protein-coding"]
[1376,"chr19",10724946,10725372,"+",0,"NA","exon (NM_007650, exon 5 of 11)","exon (NM_007650, exon 5 of 11)",13815,"NM_007650",12507,"Mm.779","NM_007650","ENSMUSG00000024669","Cd5","Ly-1|Ly-12|Ly-A|Lyt-1","CD5 antigen","protein-coding"]
[1888,"chr4",106050732,106051123,"+",0,"NA","Intergenic","MLT1F|LTR|ERVL-MaLR",-265286,"NM_183225",329908,"Mm.234544","NM_183225","ENSMUSG00000028514","Usp24","2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851","ubiquitin specific peptidase 24","protein-coding"]
[2030,"chr5",64744456,64745015,"+",0,"NA","Intergenic","ORR1D2-int|LTR|ERVL-MaLR",-58788,"NM_008453",16599,"Mm.392759","NM_008453","ENSMUSG00000029178","Klf3","9930027G08Rik|AL024007|Bklf|Tef-2","Kruppel-like factor 3 (basic)","protein-coding"]
[2286,"chr7",29256735,29256927,"+",0,"NA","exon (NM_011464, exon 7 of 7)","exon (NM_011464, exon 7 of 7)",-8364,"NM_028179",72275,"Mm.441142","NM_028179",null,"2200002D01Rik","2010005J02Rik|H2RSP|IMUP|IMUP-1|IMUP-2","RIKEN cDNA 2200002D01 gene","protein-coding"]
[2369,"chr7",120874442,120874895,"+",0,"NA","intron (NM_001267711, intron 3 of 17)","B2_Mm2|SINE|B2",23479,"NM_001267711",13631,"Mm.25997","NM_007908","ENSMUSG00000035064","Eef2k","C86191|eEF-2K","eukaryotic elongation factor-2 kinase","protein-coding"]
[2647,"chr9",77910857,77911614,"+",0,"NA","Intergenic","Intergenic",-6130,"NM_134255",68801,"Mm.430736","NM_134255","ENSMUSG00000032349","Elovl5","1110059L23Rik|AI747313|AU043003|HELO1","ELOVL family member 5, elongation of long chain fatty acids (yeast)","protein-coding"]
[1595,"chr2",137065011,137065199,"+",0,"NA","intron (NM_028834, intron 6 of 7)","intron (NM_028834, intron 6 of 7)",51415,"NM_013822",16449,"Mm.22398","NM_013822","ENSMUSG00000027276","Jag1","ABE2|Gsfabe2|Htu|Ozz|Ser-1","jagged 1","protein-coding"]
[190,"chr1",181256081,181256577,"+",0,"NA","Intergenic","Intergenic",-44351,"NM_145514",226757,"Mm.289082","NM_145514","ENSMUSG00000038733","Wdr26","1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7","WD repeat domain 26","protein-coding"]
[1750,"chr3",95950851,95951489,"+",0,"NA","Intergenic","CpG",21913,"NM_023210",66471,"Mm.218657","NM_023210","ENSMUSG00000015749","Anp32e","2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L","acidic (leucine-rich) nuclear phosphoprotein 32 family, member E","protein-coding"]
[1808,"chr3",145101823,145104436,"+",0,"NA","Intergenic","Intergenic",-4088,"NM_178697",229933,"Mm.331420","NM_178697","ENSMUSG00000036960","Clca2","4732440A06|AI586120|Clca5","chloride channel accessory 2","protein-coding"]
[822,"chr14",20607041,20607772,"+",0,"NA","5' UTR (NM_030180, exon 2 of 21)","5' UTR (NM_030180, exon 2 of 21)",10948,"NM_030180",78787,"Mm.301173","NM_030180","ENSMUSG00000034235","Usp54","4930429G18Rik|AI115571|C030002J06Rik","ubiquitin specific peptidase 54","protein-coding"]
[601,"chr12",73895970,73896145,"+",0,"NA","Intergenic","(CAGAGA)n|Simple_repeat|Simple_repeat",-5267,"NM_001313920",15251,"Mm.3879","NM_010431","ENSMUSG00000021109","Hif1a","AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78","hypoxia inducible factor 1, alpha subunit","protein-coding"]
[1739,"chr3",94621005,94623337,"+",0,"NA","intron (NM_011656, intron 8 of 12)","intron (NM_011656, intron 8 of 12)",36701,"NM_001293728",22156,"Mm.10214","NM_011656","ENSMUSG00000005968","Tuft1","-","tuftelin 1","protein-coding"]
[231,"chr10",18859663,18863640,"+",0,"NA","Intergenic","Intergenic",16580,"NM_022032",64058,"Mm.28209","NM_022032","ENSMUSG00000019851","Perp","1110017A08Rik|KCP1|KRTCAP1|PIGPC1|THW","PERP, TP53 apoptosis effector","protein-coding"]
[1610,"chr2",141279593,141280458,"+",0,"NA","intron (NM_001013802, intron 5 of 18)","IMPB_01|Satellite|Satellite",-608549,"NM_178382",71436,"Mm.426781","NM_178382","ENSMUSG00000051379","Flrt3","5530600M07Rik|C430047I10Rik|mKIAA1469","fibronectin leucine rich transmembrane protein 3","protein-coding"]
[779,"chr13",76122695,76123339,"+",0,"NA","intron (NM_001081352, intron 12 of 43)","intron (NM_001081352, intron 12 of 43)",24283,"NM_001081352",218343,"Mm.277964","NM_001081352","ENSMUSG00000033991","Ttc37","mKIAA0372","tetratricopeptide repeat domain 37","protein-coding"]
[551,"chr12",24593825,24594475,"+",0,"NA","intron (NM_145890, intron 6 of 13)","intron (NM_145890, intron 6 of 13)",13431,"NM_145890",195733,"Mm.263068","NM_145890","ENSMUSG00000020656","Grhl1","LBP-32|MGR|Tcfcp2l2","grainyhead-like 1 (Drosophila)","protein-coding"]
[343,"chr11",3887864,3888157,"+",0,"NA","3' UTR (NM_026150, exon 3 of 3)","3' UTR (NM_026150, exon 3 of 3)",7116,"NM_026150",67430,"Mm.347950","NM_026150","ENSMUSG00000020434","4921536K21Rik","AV043724","RIKEN cDNA 4921536K21 gene","protein-coding"]
[504,"chr11",106674832,106675674,"+",0,"NA","intron (NM_001305158, intron 12 of 14)","intron (NM_001305158, intron 12 of 14)",40028,"NM_001305158",18613,"Mm.343951","NM_008816","ENSMUSG00000020717","Pecam1","C85791|Cd31|PECAM-1|Pecam","platelet/endothelial cell adhesion molecule 1","protein-coding"]
[981,"chr15",77820112,77821809,"+",0,"NA","intron (NM_022410, intron 1 of 40)","intron (NM_022410, intron 1 of 40)",21215,"NM_022410",17886,"Mm.29677","NM_022410","ENSMUSG00000022443","Myh9","Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6","myosin, heavy polypeptide 9, non-muscle","protein-coding"]
[697,"chr13",34211972,34213638,"+",0,"NA","intron (NM_001033167, intron 4 of 10)","intron (NM_001033167, intron 4 of 10)",49841,"NM_001110515",69666,"Mm.24788","NM_001101430","ENSMUSG00000071451","Psmg4","PAC-4|mPAC4","proteasome (prosome, macropain) assembly chaperone 4","protein-coding"]
[857,"chr14",63446706,63447953,"+",0,"NA","intron (NM_177628, intron 2 of 3)","B3|SINE|B2",10935,"NM_177628",219148,"Mm.37882","NM_177628","ENSMUSG00000035095","Fam167a","A030013D21","family with sequence similarity 167, member A","protein-coding"]
[1010,"chr15",96877075,96877975,"+",0,"NA","Intergenic","Intergenic",-177827,"NM_175121",67760,"Mm.46754","NM_175121","ENSMUSG00000022462","Slc38a2","5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382","solute carrier family 38, member 2","protein-coding"]
[707,"chr13",38079757,38082148,"+",0,"NA","Intergenic","Intergenic",43963,"NM_024242",71340,"Mm.297130","NM_024242","ENSMUSG00000021428","Riok1","3110046C13Rik|5430416A05Rik|Ad034","RIO kinase 1 (yeast)","protein-coding"]
[1966,"chr4",148824950,148825693,"+",0,"NA","intron (NM_001159344, intron 1 of 20)","intron (NM_001159344, intron 1 of 20)",20929,"NM_027195",69743,"Mm.233879","NM_027195","ENSMUSG00000028977","Casz1","2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e","castor zinc finger 1","protein-coding"]
[1665,"chr2",172769952,172770196,"+",0,"NA","Intergenic","Intergenic",170247,"NM_007557",12162,"Mm.595","NM_007557","ENSMUSG00000008999","Bmp7","OP1","bone morphogenetic protein 7","protein-coding"]
[261,"chr10",61669825,61669965,"+",0,"NA","intron (NM_026438, intron 8 of 10)","ORR1C2|LTR|ERVL-MaLR",10395,"NR_126477",75539,null,"NR_126477",null,"1700022H01Rik","-","RIKEN cDNA 1700022H01 gene","ncRNA"]
[1782,"chr3",116952725,116954157,"+",0,"NA","intron (NM_023245, intron 1 of 7)","intron (NM_023245, intron 1 of 7)",-14826,"NR_040596",74654,"Mm.410820","NR_040596","ENSMUSG00000080907","4930455H04Rik","-","RIKEN cDNA 4930455H04 gene","ncRNA"]
[2698,"chr9",110349200,110351786,"+",0,"NA","intron (NM_001001144, intron 1 of 22)","intron (NM_001001144, intron 1 of 22)",17137,"NM_001001144",235623,"Mm.288741","NM_001001144","ENSMUSG00000032485","Scap","9530044G19|mKIAA0199","SREBF chaperone","protein-coding"]
[2439,"chr8",57694027,57694978,"+",0,"NA","Intergenic","Lx10|LINE|L1",-41447,"NM_144731",108150,"Mm.62886","NM_144731","ENSMUSG00000031608","Galnt7","AI225872","UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7","protein-coding"]
[2252,"chr6",145969381,145969625,"+",0,"NA","Intergenic","Intergenic",35356,"NM_010656",16651,"Mm.49689","NM_010656","ENSMUSG00000030255","Sspn","Krag","sarcospan","protein-coding"]
[2506,"chr8",111781660,111783118,"+",0,"NA","intron (NM_011801, intron 5 of 6)","intron (NM_011801, intron 5 of 6)",-38540,"NM_009954",12927,"Mm.3758","NM_009954","ENSMUSG00000031955","Bcar1","AI385681|Cas|Crkas","breast cancer anti-estrogen resistance 1","protein-coding"]
[321,"chr10",99397163,99397273,"+",0,"NA","Intergenic","Intergenic",133987,"NM_026268",67603,"Mm.1791","NM_026268","ENSMUSG00000019960","Dusp6","1300019I03Rik|MKP-3|MKP3|PYST1","dual specificity phosphatase 6","protein-coding"]
[792,"chr13",98015108,98016072,"+",0,"NA","intron (NM_012026, intron 9 of 35)","(GA)n|Simple_repeat|Simple_repeat",190575,"NM_012026",110596,"Mm.252718","NM_012026","ENSMUSG00000021662","Arhgef28","9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF","Rho guanine nucleotide exchange factor (GEF) 28","protein-coding"]
[1079,"chr16",25956474,25957957,"+",0,"NA","Intergenic","Intergenic",148569,"NM_173379",210530,"Mm.326869","NM_173379",null,"P3h2","4832416N06|AW553532|Leprel1|Mlat4","prolyl 3-hydroxylase 2","protein-coding"]
[1248,"chr17",83884320,83887085,"+",0,"NA","Intergenic","Zaphod|DNA|hAT-Tip100",-38912,"NM_025325",107766,"Mm.30100","NM_025325","ENSMUSG00000000673","Haao","0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO","3-hydroxyanthranilate 3,4-dioxygenase","protein-coding"]
[2422,"chr8",24427884,24432617,"+",0,"NA","Intergenic","Intergenic",8696,"NM_026931",69068,"Mm.25775","NM_026931",null,"1810011O10Rik","1110065B09Rik|AW121743|AW321058","RIKEN cDNA 1810011O10 gene","protein-coding"]
[1590,"chr2",131204914,131205229,"+",0,"NA","intron (NR_037281, intron 2 of 2)","intron (NR_037281, intron 2 of 2)",-5289,"NM_001291032",69596,"Mm.2937","NM_027129","ENSMUSG00000068264","Ap5s1","0610038L13Rik|2310035K24Rik|AW060727|sigma5","adaptor-related protein 5 complex, sigma 1 subunit","protein-coding"]
[2401,"chr7",143721857,143724628,"+",0,"NA","intron (NM_024289, intron 1 of 21)","intron (NM_024289, intron 1 of 21)",17118,"NM_001199227",79196,"Mm.21199","NM_024289","ENSMUSG00000037606","Osbpl5","1110006M06Rik|AI462538|ORP5|Obph1|Osbp2","oxysterol binding protein-like 5","protein-coding"]
[1652,"chr2",167925962,167926194,"+",0,"NA","Intergenic","MLT1K|LTR|ERVL-MaLR",-6249,"NM_011201",19246,"Mm.277916","NM_011201","ENSMUSG00000027540","Ptpn1","PTP-1B|PTP-HA2|PTP1B","protein tyrosine phosphatase, non-receptor type 1","protein-coding"]
[1516,"chr2",51417441,51418632,"+",0,"NA","Intergenic","Intergenic",19864,"NR_130155",73375,"Mm.396227","NR_130155","ENSMUSG00000086007","1700057H21Rik","-","RIKEN cDNA 1700057H21 gene","ncRNA"]
[2462,"chr8",80857763,80858593,"+",0,"NA","intron (NM_001301298, intron 1 of 10)","intron (NM_001301298, intron 1 of 10)",22301,"NM_021356",14388,"Mm.277409","NM_021356","ENSMUSG00000031714","Gab1","AA408973|AW107238","growth factor receptor bound protein 2-associated protein 1","protein-coding"]
[2053,"chr5",103419440,103420709,"+",0,"NA","Intergenic","RMER15|LTR|ERVL",-5118,"NM_011204",19249,"Mm.3414","NM_011204","ENSMUSG00000034573","Ptpn13","AI324989|PTP-BL|PTPL1|Ptpri|RIP","protein tyrosine phosphatase, non-receptor type 13","protein-coding"]
[924,"chr15",12492502,12493382,"+",0,"NA","intron (NM_001081064, intron 1 of 23)","intron (NM_001081064, intron 1 of 23)",99614,"NM_001081064",68070,"Mm.423205","NM_001081064","ENSMUSG00000022197","Pdzd2","4930537L06Rik|A930022H17Rik|Gm82|Pdzk3|mKIAA0300","PDZ domain containing 2","protein-coding"]
[2301,"chr7",49332239,49332460,"+",0,"NA","intron (NM_175272, intron 1 of 37)","intron (NM_175272, intron 1 of 37)",86160,"NM_175272",78286,"Mm.333881","NM_175272","ENSMUSG00000052512","Nav2","5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015","neuron navigator 2","protein-coding"]
[760,"chr13",63087787,63091761,"+",0,"NA","intron (NM_001289924, intron 5 of 16)","intron (NM_001289924, intron 5 of 16)",124881,"NM_001289924",72061,"Mm.188105","NM_028079","ENSMUSG00000021458","2010111I01Rik","2300006M17Rik|AP-O|Aopep|mir-23b|mir-24-1|mir-27b","RIKEN cDNA 2010111I01 gene","protein-coding"]
[863,"chr14",67188900,67189038,"+",0,"NA","Intergenic","Intergenic",-44323,"NM_010095",13592,"Mm.319947","NM_010095","ENSMUSG00000022053","Ebf2","D14Ggc1e|EBF-2|Mmot1|O/E-3|OE-3","early B cell factor 2","protein-coding"]
[2481,"chr8",92895379,92896540,"+",0,"NA","intron (NM_173014, intron 11 of 13)","intron (NM_173014, intron 11 of 13)",-5436,"NM_027112",69543,"Mm.440514","NM_027112","ENSMUSG00000078144","Capns2","2310005G05Rik|30K-2","calpain, small subunit 2","protein-coding"]
[531,"chr11",121479096,121481766,"+",0,"NA","intron (NM_029878, intron 7 of 38)","intron (NM_029878, intron 7 of 38)",28482,"NM_029878",108903,"Mm.23686","NM_029878","ENSMUSG00000039230","Tbcd","2310057L06Rik|A030005L14Rik|mKIAA0988","tubulin-specific chaperone d","protein-coding"]
[2027,"chr5",64541853,64542013,"+",0,"NA","Intergenic","Intergenic",64925,"NR_045413",77382,"Mm.366742","NR_045411","ENSMUSG00000105352","C030018K13Rik","-","RIKEN cDNA C030018K13 gene","ncRNA"]
[2469,"chr8",86764941,86771044,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-21986,"NM_009172",20437,"Mm.324553","NM_009172","ENSMUSG00000036840","Siah1a","AA982064|AI853500|Sinh1a","seven in absentia 1A","protein-coding"]
[172,"chr1",171038196,171038402,"+",0,"NA","Intergenic","CpG",19373,"NM_144559",246256,"Mm.251254","NM_144559","ENSMUSG00000059089","Fcgr4","4833442P21Rik|CD16-2|FcgRIV|FcgammaRIV|Fcgr3a|Fcrl3","Fc receptor, IgG, low affinity IV","protein-coding"]
[1745,"chr3",95262512,95262638,"+",0,"NA","intron (NM_173347, intron 4 of 7)","intron (NM_173347, intron 4 of 7)",-11382,"NM_134253",171388,"Mm.331209","NM_134253","ENSMUSG00000028115","Bnipl","1700128A13Rik|BNIP-S|BNIPL1|BNIPL2|PP73|PP753","BCL2/adenovirus E1B 19kD interacting protein like","protein-coding"]
[2594,"chr9",54566048,54567812,"+",0,"NA","Intergenic","Intergenic",-6851,"NM_019686",56506,"Mm.42192","NM_019686",null,"Cib2","2810434I23Rik|AI449053","calcium and integrin binding family member 2","protein-coding"]
[2111,"chr5",150214638,150215007,"+",0,"NA","Intergenic","Intergenic",-45108,"NM_172887",320365,"Mm.216590","NM_172887","ENSMUSG00000056602","Fry","13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143","furry homolog (Drosophila)","protein-coding"]
[1366,"chr19",8980207,8984415,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-6973,"NR_104460",66395,"Mm.203866","NM_009643","ENSMUSG00000069833","Ahnak","DY6","AHNAK nucleoprotein (desmoyokin)","protein-coding"]
[223,"chr10",13369960,13370520,"+",0,"NA","intron (NM_001195065, intron 1 of 12)","intron (NM_001195065, intron 1 of 12)",18730,"NM_001195066",215789,"Mm.283359","NM_001033257","ENSMUSG00000062866","Phactr2","AV158170|BC012871","phosphatase and actin regulator 2","protein-coding"]
[2124,"chr6",17573034,17573700,"+",0,"NA","3' UTR (NM_008591, exon 22 of 22)","3' UTR (NM_008591, exon 22 of 22)",-63731,"NM_007604",12343,"Mm.392504","NM_007604",null,"Capza2","1110053K06Rik|AW208808|Cappa2","capping protein (actin filament) muscle Z-line, alpha 2","protein-coding"]
[721,"chr13",40315449,40316434,"+",0,"NA","Intergenic","Intergenic",-27930,"NM_172143",218165,"Mm.364096","NM_172143","ENSMUSG00000047094","Ofcc1","opo","orofacial cleft 1 candidate 1","protein-coding"]
[1897,"chr4",112095506,112096521,"+",0,"NA","intron (NM_178786, intron 2 of 10)","RLTR17|LTR|ERVK",14543,"NM_178786",320640,"Mm.253775","NM_178786","ENSMUSG00000055960","Skint4","9530098N22Rik","selection and upkeep of intraepithelial T cells 4","protein-coding"]
[1043,"chr16",11455319,11457165,"+",0,"NA","intron (NM_001290148, intron 6 of 13)","intron (NM_001290148, intron 6 of 13)",50594,"NM_001290148",74478,"Mm.325831","NM_028964","ENSMUSG00000071669","Snx29","4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a","sorting nexin 29","protein-coding"]
[1255,"chr17",84082787,84083688,"+",0,"NA","intron (NR_045458, intron 2 of 5)","B1_Mus1|SINE|Alu",4577,"NR_045458",74473,"Mm.399575","NR_045458",null,"4933433H22Rik","-","RIKEN cDNA 4933433H22 gene","ncRNA"]
[2660,"chr9",85469034,85469407,"+",0,"NA","Intergenic","Intergenic",-142070,"NM_001160379",212943,"Mm.74610","NM_001160378","ENSMUSG00000032265","Fam46a","D930050G01Rik","family with sequence similarity 46, member A","protein-coding"]
[669,"chr13",3636610,3636862,"+",0,"NA","intron (NM_001267724, intron 1 of 3)","intron (NM_001267724, intron 1 of 3)",2704,"NM_001267724",142688,"Mm.253061","NM_178283","ENSMUSG00000033781","Asb13","2210015B19Rik|6430573K02Rik|Asb-13|C85285","ankyrin repeat and SOCS box-containing 13","protein-coding"]
[282,"chr10",69936827,69936974,"+",0,"NA","intron (NM_170690, intron 25 of 41)","MTE2b|LTR|ERVL-MaLR",11368,"NM_009670",11735,"Mm.235960","NM_009670","ENSMUSG00000069601","Ank3","2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G","ankyrin 3, epithelial","protein-coding"]
[420,"chr11",72576329,72578829,"+",0,"NA","Intergenic","Intergenic",-27333,"NM_029932",77577,"Mm.46185","NM_029932","ENSMUSG00000020798","Spns3","9830002I17Rik","spinster homolog 3","protein-coding"]
[1852,"chr4",56149550,56149759,"+",0,"NA","Intergenic","Intergenic",591771,"NM_025271",11471,"Mm.251434","NM_025271","ENSMUSG00000070980","Actl7b","Tact1","actin-like 7b","protein-coding"]
[639,"chr12",86888363,86888490,"+",0,"NA","Intergenic","Intergenic",-3612,"NM_145836",238330,"Mm.248358","NM_145836","ENSMUSG00000034168","Irf2bpl","6430527G18Rik|Eap1","interferon regulatory factor 2 binding protein-like","protein-coding"]
[989,"chr15",81070978,81071786,"+",0,"NA","intron (NM_001082536, intron 2 of 13)","intron (NM_001082536, intron 2 of 13)",33665,"NM_153049",223701,"Mm.439814","NM_153049","ENSMUSG00000042292","Mkl1","AMKL|Bsac|Mal|Mrtf-A","MKL (megakaryoblastic leukemia)/myocardin-like 1","protein-coding"]
[1505,"chr2",35310353,35310721,"+",0,"NA","Intergenic","RMER15|LTR|ERVL",26472,"NM_013515",13830,"Mm.295284","NM_013515","ENSMUSG00000026880","Stom","Epb7.2","stomatin","protein-coding"]
[2372,"chr7",127675763,127676209,"+",0,"NA","Intergenic","PB1D10|SINE|Alu",-32501,"NR_030428",791073,null,"NR_030428","ENSMUSG00000076454","Mir762","Mirn762|mir-762|mmu-mir-762","microRNA 762","ncRNA"]
[1348,"chr18",80715101,80715213,"+",0,"NA","Intergenic","Intergenic",-2086,"NM_001164109",18018,"Mm.329560","NM_016791","ENSMUSG00000033016","Nfatc1","2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb","nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1","protein-coding"]
[2248,"chr6",136668183,136668657,"+",0,"NA","Intergenic","Intergenic",-6527,"NM_025806",66857,"Mm.3311","NM_025806","ENSMUSG00000030214","Plbd1","1100001H23Rik","phospholipase B domain containing 1","protein-coding"]
[577,"chr12",69502626,69502904,"+",0,"NA","Intergenic","Intergenic",-27215,"NR_038061",76062,"Mm.380755","NR_038060",null,"5830428M24Rik","100040862|Gm3007","RIKEN cDNA 5830428M24 gene","ncRNA"]
[1137,"chr16",87625037,87626101,"+",0,"NA","Intergenic","Intergenic",72239,"NM_144854",224419,"Mm.194466","NM_144854","ENSMUSG00000025610","Map3k7cl","C21orf7|ORF63|Tak1l","Map3k7 C-terminal like","protein-coding"]
[1227,"chr17",62789037,62789668,"+",0,"NA","intron (NM_207654, intron 1 of 4)","intron (NM_207654, intron 1 of 4)",91965,"NM_207654",13640,"Mm.7978","NM_010109",null,"Efna5","AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS","ephrin A5","protein-coding"]
[1417,"chr19",45207519,45207632,"+",0,"NA","Intergenic","Intergenic",27661,"NM_010691",16814,"Mm.116815","NM_010691",null,"Lbx1","Lbx1h","ladybird homeobox homolog 1 (Drosophila)","protein-coding"]
[216,"chr10",3311805,3315126,"+",0,"NA","Intergenic","Intergenic",-45694,"NM_001204916",670558,"Mm.398582","NM_001204916","ENSMUSG00000091618","H60c","4632413I24Rik|Gm9491","histocompatibility 60c","protein-coding"]
[852,"chr14",61530207,61531348,"+",0,"NA","Intergenic","Intergenic",26109,"NM_025697",66674,"Mm.282706","NM_025697","ENSMUSG00000021930","Spryd7","6330409N04Rik|Clld6","SPRY domain containing 7","protein-coding"]
[643,"chr12",90780953,90781437,"+",0,"NA","Intergenic","Intergenic",-42757,"NM_010050",13371,"Mm.21389","NM_010050","ENSMUSG00000007682","Dio2","5DII|AI324267|DIOII","deiodinase, iodothyronine, type II","protein-coding"]
[1951,"chr4",138761574,138762219,"+",0,"NA","Intergenic","PB1D9|SINE|Alu",-4298,"NM_012045",26971,"Mm.331989","NM_012045","ENSMUSG00000028749","Pla2g2f","-","phospholipase A2, group IIF","protein-coding"]
[1120,"chr16",58746314,58747529,"+",0,"NA","Intergenic","Intergenic",14319,"NM_147001",259003,"Mm.390862","NM_147001","ENSMUSG00000071510","Olfr172","MOR184-2","olfactory receptor 172","protein-coding"]
[1475,"chr2",26256727,26257127,"+",0,"NA","Intergenic","Intergenic",-19528,"NM_001302956",227638,"Mm.116769","NM_153559","ENSMUSG00000036327","Qsox2","BC030934|Qscn6l1|Soxn","quiescin Q6 sulfhydryl oxidase 2","protein-coding"]
[1794,"chr3",129535493,129536195,"+",0,"NA","intron (NM_130450, intron 2 of 4)","intron (NM_130450, intron 2 of 4)",3458,"NM_130450",170439,"Mm.314113","NM_130450","ENSMUSG00000041220","Elovl6","C77826|FAE|LCE","ELOVL family member 6, elongation of long chain fatty acids (yeast)","protein-coding"]
[1187,"chr17",27140593,27141849,"+",0,"NA","Intergenic","Intergenic",-7330,"NM_026063",67267,"Mm.272389","NM_026063","ENSMUSG00000024208","Uqcc2","2900010M23Rik|Cbp6|M19|Mnf1","ubiquinol-cytochrome c reductase complex assembly factor 2","protein-coding"]
[2193,"chr6",108447280,108449421,"+",0,"NA","intron (NM_010585, intron 44 of 61)","intron (NM_010585, intron 44 of 61)",-41393,"NR_106121",102465766,null,"NR_106121","ENSMUSG00000105697","Mir7661","mmu-mir-7661","microRNA 7661","ncRNA"]
[2636,"chr9",74910194,74911118,"+",0,"NA","Intergenic","Intergenic",-42397,"NM_001113283",235493,"Mm.208955","NM_153584","ENSMUSG00000034858","Fam214a","6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370","family with sequence similarity 214, member A","protein-coding"]
[2092,"chr5",128578317,128580844,"+",0,"NA","intron (NR_015517, intron 5 of 5)","intron (NR_015517, intron 5 of 5)",21107,"NR_015517",319616,"Mm.387738","NR_015517","ENSMUSG00000072591","5930412G12Rik","-","RIKEN cDNA 5930412G12 gene","ncRNA"]
[676,"chr13",5802622,5804158,"+",0,"NA","Intergenic","Intergenic",54702,"NR_045891",71867,"Mm.179181","NR_045891","ENSMUSG00000100625","1700016G22Rik","-","RIKEN cDNA 1700016G22 gene","ncRNA"]
[1251,"chr17",83956263,83957008,"+",0,"NA","Intergenic","Intergenic",-41917,"NR_130994",78148,"Mm.243918","NR_130994",null,"8430430B14Rik","-","RIKEN cDNA 8430430B14 gene","ncRNA"]
[277,"chr10",68354588,68354761,"+",0,"NA","Intergenic","Intergenic",-33532,"NR_045357",75148,"Mm.23505","NR_045357",null,"4930545H06Rik","-","RIKEN cDNA 4930545H06 gene","ncRNA"]
[2456,"chr8",79349450,79350733,"+",0,"NA","intron (NM_008539, intron 4 of 6)","intron (NM_008539, intron 4 of 6)",49377,"NM_008539",17125,"Mm.223717","NM_008539","ENSMUSG00000031681","Smad1","AI528653|Madh1|Madr1|Mlp1|MusMLP","SMAD family member 1","protein-coding"]
[1192,"chr17",29165397,29166853,"+",0,"NA","intron (NM_153166, intron 14 of 20)","intron (NM_153166, intron 14 of 20)",31069,"NM_001002786",442827,"Mm.440341","NM_001002786","ENSMUSG00000064147","Rab44","9830134C10Rik","RAB44, member RAS oncogene family","protein-coding"]
[879,"chr14",99521047,99521754,"+",0,"NA","Intergenic","Intergenic",222709,"NM_009769",12224,"Mm.30262","NM_009769","ENSMUSG00000005148","Klf5","4930520J07Rik|Bteb2|CKLF|IKLF","Kruppel-like factor 5","protein-coding"]
[2640,"chr9",76540128,76542405,"+",0,"NA","intron (NM_001045518, intron 1 of 3)","intron (NM_001045518, intron 1 of 3)",4538,"NM_001045518",208994,"Mm.256929","NM_001045518","ENSMUSG00000032358","Fam83b","C530008M07Rik|Gm516","family with sequence similarity 83, member B","protein-coding"]
[2700,"chr9",111085827,111086126,"+",0,"NA","Intergenic","Intergenic",-28458,"NM_001302376",54199,"Mm.7336","NM_017466","ENSMUSG00000043953","Ccrl2","1810047I05Rik|Ackr5|CCR11|Cmkbr1l2|E01|L-CCR","chemokine (C-C motif) receptor-like 2","protein-coding"]
[1095,"chr16",31291610,31292392,"+",0,"NA","Intergenic","RLTR20A4|LTR|ERVK",-16304,"NR_035427",100316676,null,"NR_035427","ENSMUSG00000080468","Mir1195","Mirn1195|mmu-mir-1195","microRNA 1195","ncRNA"]
[1183,"chr17",26503383,26504005,"+",0,"NA","Intergenic","MIRc|SINE|MIR",4778,"NM_013642",19252,"Mm.239041","NM_013642","ENSMUSG00000024190","Dusp1","3CH134|MKP1|Ptpn16|U19515|erp|mkp-1","dual specificity phosphatase 1","protein-coding"]
[1444,"chr2",9373949,9375876,"+",0,"NA","Intergenic","MIRb|SINE|MIR",185397,"NR_038180",73438,"Mm.23558","NR_038180","ENSMUSG00000085580","1700061F12Rik","-","RIKEN cDNA 1700061F12 gene","ncRNA"]
[1883,"chr4",100864666,100865050,"+",0,"NA","intron (NM_198037, intron 1 of 26)","intron (NM_198037, intron 1 of 26)",88179,"NM_198037",320508,"Mm.151962","NM_198037","ENSMUSG00000028532","Cachd1","1190007F10Rik|AI852726|B430218L07Rik|Vwcd1|mKIAA1573","cache domain containing 1","protein-coding"]
[1846,"chr4",45489650,45490217,"+",0,"NA","intron (NM_001033306, intron 1 of 5)","intron (NM_001033306, intron 1 of 5)",40895,"NM_001033306",230126,"Mm.251716","NM_001033306","ENSMUSG00000044813","Shb","BC028832","src homology 2 domain-containing transforming protein B","protein-coding"]
[2215,"chr6",121110237,121110380,"+",0,"NA","intron (NM_001270475, intron 1 of 31)","intron (NM_001270475, intron 1 of 31)",20714,"NM_001270475",194401,"Mm.122399","NM_153396","ENSMUSG00000051586","Mical3","C130040D16Rik|Mical-3|mKIAA1364","microtubule associated monooxygenase, calponin and LIM domain containing 3","protein-coding"]
[2671,"chr9",98499090,98499587,"+",0,"NA","intron (NM_009034, intron 2 of 3)","T-rich|Low_complexity|Low_complexity",8801,"NM_009034",19660,"Mm.12825","NM_009034","ENSMUSG00000032454","Rbp2","Crbp-2|CrbpII|Rbp-2","retinol binding protein 2, cellular","protein-coding"]
[133,"chr1",135868326,135868685,"+",0,"NA","Intergenic","ID_B1|SINE|B4",27644,"NM_001130176",21956,"Mm.247470","NM_011619","ENSMUSG00000026414","Tnnt2","Tnt|cTnT","troponin T2, cardiac","protein-coding"]
[123,"chr1",134111508,134115405,"+",0,"NA","intron (NM_027979, intron 1 of 11)","intron (NM_027979, intron 1 of 11)",2214,"NM_027979",71884,"Mm.328268","NM_027979","ENSMUSG00000026450","Chit1","2300002L19Rik","chitinase 1 (chitotriosidase)","protein-coding"]
[304,"chr10",88410697,88410873,"+",0,"NA","intron (NM_001004164, intron 2 of 20)","MLTR25A|LTR|ERVK",31373,"NM_001004164",432486,"Mm.335190","NM_001004164","ENSMUSG00000035311","Gnptab","EG432486|mKIAA1208","N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits","protein-coding"]
[2600,"chr9",60742932,60743287,"+",0,"NA","Intergenic","Intergenic",29988,"NM_026235",67557,"Mm.44546","NM_026235","ENSMUSG00000034839","Larp6","5430431G03Rik|AI552438|Achn","La ribonucleoprotein domain family, member 6","protein-coding"]
[2515,"chr8",120108751,120109212,"+",0,"NA","Intergenic","L1ME3B|LINE|L1",-5171,"NM_001163762",234797,"Mm.101958","NM_172286","ENSMUSG00000031824","6430548M08Rik","AW049007|Kiaa0513|mKIAA0513","RIKEN cDNA 6430548M08 gene","protein-coding"]
[2417,"chr8",23486545,23486953,"+",0,"NA","Intergenic","Intergenic",75247,"NM_013834",20377,"Mm.281691","NM_013834","ENSMUSG00000031548","Sfrp1","2210415K03Rik|AW011917|AW107218|AW742929|sFRP-1","secreted frizzled-related protein 1","protein-coding"]
[1631,"chr2",156730118,156730476,"+",0,"NA","intron (NM_001042487, intron 1 of 6)","intron (NM_001042487, intron 1 of 6)",9018,"NM_001042487",228836,"Mm.22094","NM_146128","ENSMUSG00000061689","Dlgap4","AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16","discs, large homolog-associated protein 4 (Drosophila)","protein-coding"]
[1828,"chr4",11662402,11662800,"+",0,"NA","Intergenic","RMER13B|LTR|ERVK",-41846,"NM_010276",14579,"Mm.247486","NM_010276","ENSMUSG00000028214","Gem","AV020497","GTP binding protein (gene overexpressed in skeletal muscle)","protein-coding"]
[2605,"chr9",65196297,65196783,"+",0,"NA","Intergenic","Intergenic",-18150,"NM_177460",214424,"Mm.31129","NM_177460","ENSMUSG00000032392","Parp16","ARTD15|BC055447|C79952|PARP-16","poly (ADP-ribose) polymerase family, member 16","protein-coding"]
[2294,"chr7",43709889,43710503,"+",0,"NA","Intergenic","Intergenic",-2371,"NM_001039042",626834,"Mm.389891","NM_001039042","ENSMUSG00000054046","Klk13","Egfbp-2|mGk-13","kallikrein related-peptidase 13","protein-coding"]
[56,"chr1",74727320,74727627,"+",0,"NA","intron (NM_024264, intron 1 of 8)","Lx5|LINE|L1",13938,"NM_024264",104086,"Mm.85083","NM_024264","ENSMUSG00000026170","Cyp27a1","1300013A03Rik|Cyp27","cytochrome P450, family 27, subfamily a, polypeptide 1","protein-coding"]
[1369,"chr19",9033824,9035132,"+",0,"NA","intron (NR_104460, intron 4 of 6)","intron (NR_104460, intron 4 of 6)",16574,"NR_105786",102465190,null,"NR_105786","ENSMUSG00000099308","Mir6367","Gm27467|mmu-mir-6367","microRNA 6367","ncRNA"]
[54,"chr1",74330406,74330529,"+",0,"NA","intron (NM_001039509, intron 2 of 9)","intron (NM_001039509, intron 2 of 9)",-2143,"NM_019999",56695,"Mm.384726","NM_019999","ENSMUSG00000026179","Pnkd","2210013N15Rik|2810403H05Rik|AI854243|Brp17|MNCb-5687|MR-1|Tahccp2","paroxysmal nonkinesiogenic dyskinesia","protein-coding"]
[1151,"chr16",95769392,95769574,"+",0,"NA","Intergenic","Intergenic",67076,"NM_011809",23872,"Mm.290207","NM_011809","ENSMUSG00000022895","Ets2","AU022856|Ets-2","E26 avian leukemia oncogene 2, 3' domain","protein-coding"]
[306,"chr10",94546252,94546963,"+",0,"NA","intron (NM_172051, intron 1 of 3)","intron (NM_172051, intron 1 of 3)",-28650,"NM_001168684",319880,"Mm.23047","NM_172051","ENSMUSG00000020023","Tmcc3","AW488095|C630016B22Rik|C88213|Tmcc1","transmembrane and coiled coil domains 3","protein-coding"]
[1204,"chr17",34959483,34966625,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-3816,"NM_010478",15511,"Mm.372314","NM_010478","ENSMUSG00000090877","Hspa1b","Hsp70|Hsp70-1|Hsp70.1|hsp68","heat shock protein 1B","protein-coding"]
[70,"chr1",86450984,86451571,"+",0,"NA","Intergenic","B3|SINE|B2",24948,"NM_027966",71863,"Mm.179627","NM_027966","ENSMUSG00000036574","1700019O17Rik","-","RIKEN cDNA 1700019O17 gene","protein-coding"]
[839,"chr14",47349876,47351077,"+",0,"NA","Intergenic","L1MC4|LINE|L1",-23384,"NM_010705",16854,"Mm.248615","NM_010705","ENSMUSG00000050335","Lgals3","GBP|L-34|Mac-2|gal3","lectin, galactose binding, soluble 3","protein-coding"]
[2520,"chr8",122957593,122957724,"+",0,"NA","intron (NR_037865, intron 2 of 13)","L1MD3|LINE|L1",84626,"NR_037865",77087,"Mm.31567","NM_001081379","ENSMUSG00000035569","Ankrd11","2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod","ankyrin repeat domain 11","protein-coding"]
[166,"chr1",161907591,161908640,"+",0,"NA","Intergenic","Intergenic",-31454,"NM_172645",226551,"Mm.170002","NM_172645","ENSMUSG00000040297","Suco","4732491B11|AI848100|AU016931|Opt","SUN domain containing ossification factor","protein-coding"]
[2225,"chr6",125481497,125485971,"+",0,"NA","intron (NM_007657, intron 1 of 7)","URR1A|DNA|hAT-Charlie",11021,"NM_007657",12527,"Mm.210676","NM_007657","ENSMUSG00000030342","Cd9","Tspan29","CD9 antigen","protein-coding"]
[88,"chr1",106857896,106858611,"+",0,"NA","Intergenic","Intergenic",-2927,"NM_009257",20724,"Mm.268618","NM_009257","ENSMUSG00000067006","Serpinb5","1110036M19Rik|AI462524|AI646751|Maspin|PI-5|Spi7|ovalbumin","serine (or cysteine) peptidase inhibitor, clade B, member 5","protein-coding"]
[1578,"chr2",112399107,112399704,"+",0,"NA","intron (NM_024254, intron 1 of 9)","intron (NM_024254, intron 1 of 9)",20194,"NM_024254",72425,"Mm.425091","NM_024254","ENSMUSG00000027132","Katnbl1","2410042D21Rik|AA166487|AA473307|AI467442","katanin p80 subunit B like 1","protein-coding"]
[1009,"chr15",96846126,96846317,"+",0,"NA","Intergenic","Intergenic",-146523,"NM_175121",67760,"Mm.46754","NM_175121","ENSMUSG00000022462","Slc38a2","5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382","solute carrier family 38, member 2","protein-coding"]
[30,"chr1",52502328,52502607,"+",0,"NA","Intergenic","Intergenic",-2019,"NM_008667",17936,"Mm.25903","NM_008667","ENSMUSG00000002881","Nab1","-","Ngfi-A binding protein 1","protein-coding"]
[403,"chr11",65793680,65795157,"+",0,"NA","Intergenic","MTD|LTR|ERVL-MaLR",-6059,"NM_001316367",26398,"Mm.412922","NM_009157","ENSMUSG00000033352","Map2k4","JNKK1|MEK4|MKK4|PRKMK4|Sek1|Serk1","mitogen-activated protein kinase kinase 4","protein-coding"]
[466,"chr11",97988478,97988680,"+",0,"NA","Intergenic","Intergenic",-2133,"NM_001163608",72324,"Mm.39617","NM_028199","ENSMUSG00000017417","Plxdc1","2410003I07Rik|AI848450|Tem7","plexin domain containing 1","protein-coding"]
[134,"chr1",135869440,135869606,"+",0,"NA","Intergenic","Intergenic",28662,"NM_001130176",21956,"Mm.247470","NM_011619","ENSMUSG00000026414","Tnnt2","Tnt|cTnT","troponin T2, cardiac","protein-coding"]
[2151,"chr6",52680399,52680869,"+",0,"NA","Intergenic","Intergenic",-33095,"NM_025816",52440,"Mm.389757","NM_025816","ENSMUSG00000004535","Tax1bp1","1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151","Tax1 (human T cell leukemia virus type I) binding protein 1","protein-coding"]
[618,"chr12",79506432,79507036,"+",0,"NA","intron (NM_009014, intron 7 of 10)","intron (NM_009014, intron 7 of 10)",209383,"NM_001252562",19363,"Mm.341756","NM_009014","ENSMUSG00000059060","Rad51b","AI553500|R51H2|Rad51l1|mREC2","RAD51 homolog B","protein-coding"]
[848,"chr14",55768463,55769090,"+",0,"NA","TTS (NM_008519)","TTS (NM_008519)",2814,"NM_008519",16995,"Mm.20853","NM_008519","ENSMUSG00000046908","Ltb4r1","BLT1|BLTR|Ltb4r|mBLTR","leukotriene B4 receptor 1","protein-coding"]
[1829,"chr4",16172879,16173894,"+",0,"NA","intron (NR_045765, intron 2 of 6)","intron (NR_045765, intron 2 of 6)",9276,"NR_045765",100415915,"Mm.387180","NR_045765","ENSMUSG00000085112","A530072M11Rik","-","RIKEN cDNA gene A530072M11","ncRNA"]
[1904,"chr4",119785347,119786254,"+",0,"NA","Intergenic","RMER1C|Other|Other",-28878,"NM_010657",16656,"Mm.302758","NM_010657","ENSMUSG00000028634","Hivep3","2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3","human immunodeficiency virus type I enhancer binding protein 3","protein-coding"]
[1629,"chr2",156202566,156202729,"+",0,"NA","intron (NM_172674, intron 1 of 17)","intron (NM_172674, intron 1 of 17)",6000,"NM_172674",228829,"Mm.427078","NM_172674","ENSMUSG00000038116","Phf20","6820402O20Rik","PHD finger protein 20","protein-coding"]
[1761,"chr3",101692311,101692679,"+",0,"NA","Intergenic","Intergenic",-87788,"NM_144900",11928,"Mm.193670","NM_144900","ENSMUSG00000033161","Atp1a1","Atpa-1|BC010319","ATPase, Na+/K+ transporting, alpha 1 polypeptide","protein-coding"]
[2196,"chr6",108535114,108535297,"+",0,"NA","intron (NM_010585, intron 60 of 61)","MIR3|SINE|MIR",45462,"NR_106121",102465766,null,"NR_106121","ENSMUSG00000105697","Mir7661","mmu-mir-7661","microRNA 7661","ncRNA"]
[1918,"chr4",128866298,128866417,"+",0,"NA","Intergenic","B1_Mus2|SINE|Alu",-17783,"NM_178110",67525,"Mm.30653","NM_178110","ENSMUSG00000041000","Trim62","6330414G21Rik|AI450348|Dear1","tripartite motif-containing 62","protein-coding"]
[1323,"chr18",61626878,61629869,"+",0,"NA","Intergenic","Intergenic",-11280,"NR_045420",545261,"Mm.426593","NR_045420","ENSMUSG00000098098","Bvht","Braveheart|Gm20748","braveheart long non-coding RNA","ncRNA"]
[1455,"chr2",19301195,19301330,"+",0,"NA","intron (NM_001271565, intron 17 of 17)","intron (NM_001271565, intron 17 of 17)",-43055,"NR_126563",108871,"Mm.107666","NR_126563",null,"4930447M23Rik","-","RIKEN cDNA 4930447M23 gene","ncRNA"]
[2662,"chr9",85495150,85495449,"+",0,"NA","Intergenic","Intergenic",-168149,"NM_001160379",212943,"Mm.74610","NM_001160378","ENSMUSG00000032265","Fam46a","D930050G01Rik","family with sequence similarity 46, member A","protein-coding"]
[1492,"chr2",32871970,32872096,"+",0,"NA","Intergenic","Intergenic",-4101,"NM_146119",227737,"Mm.301646","NM_146119","ENSMUSG00000026796","Fam129b","9130404D14Rik","family with sequence similarity 129, member B","protein-coding"]
[2729,"chr9",123659468,123659811,"+",0,"NA","intron (NM_139142, intron 4 of 10)","intron (NM_139142, intron 4 of 10)",19193,"NM_139142",102680,"Mm.440867","NM_139142","ENSMUSG00000036814","Slc6a20a","A730081N20Rik|AU022428|Xt3s1|Xtrp3s1","solute carrier family 6 (neurotransmitter transporter), member 20A","protein-coding"]
[703,"chr13",37667640,37667754,"+",0,"NA","Intergenic","Intergenic",-158341,"NM_026830",68750,"Mm.491109","NM_026830","ENSMUSG00000039087","Rreb1","1110037N09Rik|AA414966|B930013M22Rik","ras responsive element binding protein 1","protein-coding"]
[1134,"chr16",85196070,85200485,"+",0,"NA","Intergenic","Intergenic",-24570,"NM_001198826",11820,"Mm.277585","NM_007471","ENSMUSG00000022892","App","Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp","amyloid beta (A4) precursor protein","protein-coding"]
[1100,"chr16",36464535,36464731,"+",0,"NA","Intergenic","RSINE1|SINE|B4",-9241,"NM_025288",20863,"Mm.136573","NM_025288","ENSMUSG00000054905","Stfa3","Stf3","stefin A3","protein-coding"]
[1377,"chr19",12472882,12473282,"+",0,"NA","intron (NM_172442, intron 8 of 8)","intron (NM_172442, intron 8 of 8)",12303,"NM_010821",17476,"Mm.3999","NM_010821","ENSMUSG00000046805","Mpeg1","MPS1|Mpg-1","macrophage expressed gene 1","protein-coding"]
[2488,"chr8",95214622,95215800,"+",0,"NA","Intergenic","Intergenic",-72671,"NM_001145831",16582,"Mm.378951","NM_010631","ENSMUSG00000031788","Kifc3","AI325457|BB123200","kinesin family member C3","protein-coding"]
[1461,"chr2",21235290,21235887,"+",0,"NA","Intergenic","Intergenic",29864,"NM_177588",208967,"Mm.268841","NM_177588","ENSMUSG00000048550","Thnsl1","AW413632","threonine synthase-like 1 (bacterial)","protein-coding"]
[185,"chr1",180386957,180387391,"+",0,"NA","intron (NM_001081175, intron 2 of 7)","intron (NM_001081175, intron 2 of 7)",-56625,"NR_003623",277333,"Mm.389223","NM_199472",null,"Gm5069","EG277333","glyceraldehyde-3-phosphate dehydrogenase pseudogene","pseudo"]
[2487,"chr8",95154213,95154646,"+",0,"NA","Intergenic","RSINE1|SINE|B4",-11889,"NM_001145831",16582,"Mm.378951","NM_010631","ENSMUSG00000031788","Kifc3","AI325457|BB123200","kinesin family member C3","protein-coding"]
[1719,"chr3",88149087,88150019,"+",0,"NA","intron (NM_001310587, intron 1 of 11)","intron (NM_001310587, intron 1 of 11)",7181,"NM_001310593",17261,"Mm.28184","NM_133665","ENSMUSG00000001419","Mef2d","C80750","myocyte enhancer factor 2D","protein-coding"]
[2716,"chr9",120918631,120919528,"+",0,"NA","Intergenic","Intergenic",-3829,"NR_040742",76402,"Mm.436588","NR_040742","ENSMUSG00000100146","1700020M21Rik","-","RIKEN cDNA 1700020M21 gene","ncRNA"]
[4,"chr1",23912486,23912973,"+",0,"NA","intron (NM_028534, intron 1 of 9)","intron (NM_028534, intron 1 of 9)",-2993,"NM_001290683",98366,"Mm.329963","NM_028534","ENSMUSG00000026155","Smap1","1700056O10Rik|4921514B13Rik|4921525H11Rik|AI462175","small ArfGAP 1","protein-coding"]
[1985,"chr5",17270983,17272190,"+",0,"NA","Intergenic","Intergenic",-204536,"NM_027609",70935,"Mm.332225","NM_027609","ENSMUSG00000058643","Speer4f1","4922502J04Rik|SPEER-4F|Speer4f","spermatogenesis associated glutamate (E)-rich protein 4F1","protein-coding"]
[2669,"chr9",96380911,96382362,"+",0,"NA","Intergenic","Intergenic",-17337,"NM_007502",11933,"Mm.424","NM_007502","ENSMUSG00000032412","Atp1b3","AA409958|AI664000|AW212096","ATPase, Na+/K+ transporting, beta 3 polypeptide","protein-coding"]
[1691,"chr3",52601374,52601484,"+",0,"NA","Intergenic","Intergenic",-138295,"NR_038079",329639,"Mm.131245","NR_038079","ENSMUSG00000102785","Gm2447","100039832|A530017F20","predicted gene 2447","ncRNA"]
[2003,"chr5",33713012,33713562,"+",0,"NA","Intergenic","Intergenic",-8437,"NM_001205270",14184,"Mm.6904","NM_008010","ENSMUSG00000054252","Fgfr3","CD333|FR3|Fgfr-3|Flg-2|HBGFR|Mfr3|sam3","fibroblast growth factor receptor 3","protein-coding"]

{"sheet":"4_promoters not bound by Dnmt3a","index":3,"n_rows":8990,"n_cols":19,"rows_kept":4500,"cut":true,"bounds":{"rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0},"read":"bin_record_odd","flags":["formulas_cached_only"]}
["PeakID (cmd=annotatePeaks.pl K27ac_WT_belly_promoters_NOT_bound_Dnmt3a.bed mm10)","Chr","Start","End","Strand","Peak Score","Focus Ratio/Region Size","Annotation","Detailed Annotation","Distance to TSS","Nearest PromoterID","Entrez ID","Nearest Unigene","Nearest Refseq","Nearest Ensembl","Gene Name","Gene Alias","Gene Description","Gene Type"]
[6712,"chr6",42348448,42350607,"+",0,"NA","promoter-TSS (NM_001289617)","promoter-TSS (NM_001289617)",-301,"NM_011777",22793,"Mm.282303","NM_011777","ENSMUSG00000029860","Zyx","9530098H06Rik|R75157","zyxin","protein-coding"]
[8563,"chr9",87254928,87255533,"+",0,"NA","intron (NM_199316, intron 1 of 26)","intron (NM_199316, intron 1 of 26)",302,"NM_199316",382090,"Mm.335338","NM_199316","ENSMUSG00000056919","Cep162","4922501C03Rik|mKIAA1009","centrosomal protein 162","protein-coding"]
[8434,"chr9",57147734,57149589,"+",0,"NA","Intergenic","Intergenic",-1627,"NM_028347",72774,"Mm.35749","NM_028347","ENSMUSG00000032298","Neil1","2810450N13Rik|Nei1","nei endonuclease VIII-like 1 (E. coli)","protein-coding"]
[5006,"chr3",7366434,7367489,"+",0,"NA","intron (NM_008862, intron 1 of 2)","intron (NM_008862, intron 1 of 2)",357,"NM_008862",18767,"Mm.3193","NM_008862","ENSMUSG00000027499","Pkia","AI415001|PKIalpha","protein kinase inhibitor, alpha","protein-coding"]
[3509,"chr17",34897635,34899954,"+",0,"NA","promoter-TSS (NM_001286573)","promoter-TSS (NM_001286573)",-180,"NM_001286573",110147,"Mm.35345","NM_145830","ENSMUSG00000013787","Ehmt2","Bat8|D17Ertd710e|G9a|KMT1C|NG36","euchromatic histone lysine N-methyltransferase 2","protein-coding"]
[7652,"chr7",131409686,131411592,"+",0,"NA","promoter-TSS (NM_175115)","promoter-TSS (NM_175115)",38,"NM_025826",66885,"Mm.334274","NM_025826","ENSMUSG00000030861","Acadsb","1300003O09Rik|2-MEBCAD|BB066609|SBCAD","acyl-Coenzyme A dehydrogenase, short/branched chain","protein-coding"]
[4863,"chr2",155133540,155134501,"+",0,"NA","intron (NM_001243712, intron 1 of 25)","intron (NM_001243712, intron 1 of 25)",539,"NM_008395",16396,"Mm.208286","NM_008395","ENSMUSG00000027598","Itch","6720481N21Rik|8030492O04Rik|A130065M08|AIP4|C230047C07Rik","itchy, E3 ubiquitin protein ligase","protein-coding"]
[4628,"chr2",101678464,101679609,"+",0,"NA","intron (NM_001303273, intron 1 of 6)","intron (NM_001303273, intron 1 of 6)",616,"NM_001303273",22034,"Mm.292729","NM_009424","ENSMUSG00000027164","Traf6","2310003F17Rik|AI851288|C630032O20Rik","TNF receptor-associated factor 6","protein-coding"]
[1387,"chr11",87735378,87738093,"+",0,"NA","promoter-TSS (NM_009296)","promoter-TSS (NM_009296)",-830,"NM_009296",20922,"Mm.622","NM_009296","ENSMUSG00000020485","Supt4a","AL022777|Supt4h|Supt4h1|Supt4h1a","suppressor of Ty 4A","protein-coding"]
[1932,"chr12",100724752,100726058,"+",0,"NA","promoter-TSS (NM_153587)","promoter-TSS (NM_153587)",-377,"NM_153587",73086,"Mm.220417","NM_153587","ENSMUSG00000021180","Rps6ka5","3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK","ribosomal protein S6 kinase, polypeptide 5","protein-coding"]
[2634,"chr15",3978911,3980431,"+",0,"NA","promoter-TSS (NM_134099)","promoter-TSS (NM_134099)",-98,"NM_134099",106052,"Mm.234191","NM_134099",null,"Fbxo4","1700096C12Rik|AI851261|AW494535|Fbx4","F-box protein 4","protein-coding"]
[1785,"chr12",54200924,54203784,"+",0,"NA","intron (NM_028133, intron 1 of 4)","intron (NM_028133, intron 1 of 4)",1520,"NM_028133",112407,"Mm.133037","NM_028133","ENSMUSG00000035105","Egln3","2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20","egl-9 family hypoxia-inducible factor 3","protein-coding"]
[8419,"chr9",55151182,55151443,"+",0,"NA","intron (NM_180600, intron 1 of 12)","G-rich|Low_complexity|Low_complexity",1943,"NM_180600",109161,"Mm.207894","NM_180600","ENSMUSG00000032307","Ube2q2","3010021M21Rik","ubiquitin-conjugating enzyme E2Q (putative) 2","protein-coding"]
[1250,"chr11",70668155,70669950,"+",0,"NA","TTS (NM_001190378)","TTS (NM_001190378)",364,"NM_172561",216873,"Mm.432524","NM_172561","ENSMUSG00000018287","Spag7","5730443G10|ACRP|FSA-1|Fsa1l","sperm associated antigen 7","protein-coding"]
[6642,"chr6",15719692,15721807,"+",0,"NA","promoter-TSS (NM_175088)","promoter-TSS (NM_175088)",88,"NM_175088",16543,"Mm.1314","NM_175088","ENSMUSG00000041390","Mdfic","Kdt1|Mdfid","MyoD family inhibitor domain containing","protein-coding"]
[5810,"chr4",129513014,129514239,"+",0,"NA","promoter-TSS (NM_010807)","promoter-TSS (NM_010807)",45,"NM_010807",17357,"Mm.424974","NM_010807","ENSMUSG00000047945","Marcksl1","AL022768|AW215397|AW536807|D4Bc1|F52|MacMARCKS|Macs2|Macs3|Mlp|Mrp","MARCKS-like 1","protein-coding"]
[4893,"chr2",157367311,157368191,"+",0,"NA","intron (NM_026968, intron 1 of 2)","CpG",157,"NM_026968",69161,"Mm.228619","NM_026968","ENSMUSG00000063019","Manbal","1810024K12Rik|AI836500","mannosidase, beta A, lysosomal-like","protein-coding"]
[3957,"chr18",77767368,77768006,"+",0,"NA","promoter-TSS (NM_146089)","promoter-TSS (NM_146089)",93,"NM_146089",225745,"Mm.39293","NM_146089","ENSMUSG00000041840","Haus1","BC024400|Ccdc5|HEI-C","HAUS augmin-like complex, subunit 1","protein-coding"]
[8409,"chr9",54067608,54069709,"+",0,"NA","promoter-TSS (NM_001033535)","promoter-TSS (NM_001033535)",-247,"NM_001033535",244882,"Mm.325589","NM_001033535","ENSMUSG00000074345","Tnfaip8l3","9930029P06Rik|Gm517","tumor necrosis factor, alpha-induced protein 8-like 3","protein-coding"]
[3497,"chr17",34186951,34188651,"+",0,"NA","promoter-TSS (NM_013585)","promoter-TSS (NM_013585)",245,"NM_013683",21354,"Mm.482076","NM_013683","ENSMUSG00000037321","Tap1","ABC17|APT1|Abcb2|Ham-1|Ham1|MTP1|PSF1|RING4|TAP|Tap-1|Y3","transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)","protein-coding"]
[6531,"chr5",138193952,138194949,"+",0,"NA","TTS (NM_178612)","TTS (NM_178612)",136,"NM_177878",330216,"Mm.19719","NM_177878","ENSMUSG00000049285","Mblac1","-","metallo-beta-lactamase domain containing 1","protein-coding"]
[7022,"chr6",147042974,147043320,"+",0,"NA","intron (NM_145573, intron 1 of 7)","CpG",377,"NM_145573",232536,"Mm.46656","NM_145573",null,"Mrps35","MDSO23|MRP-S28|MRPS28","mitochondrial ribosomal protein S35","protein-coding"]
[3919,"chr18",65430411,65431466,"+",0,"NA","promoter-TSS (NM_172833)","promoter-TSS (NM_172833)",-59,"NM_172833",240354,"Mm.132613","NM_172833","ENSMUSG00000032688","Malt1","A630046N12|D430033E09Rik","MALT1 paracaspase","protein-coding"]
[728,"chr10",79669036,79669764,"+",0,"NA","promoter-TSS (NM_148934)","promoter-TSS (NM_148934)",-10,"NM_148934",110012,"Mm.22623","NM_148934","ENSMUSG00000020308","Tpgs1","AV005629|Gm16517|Gtrgeo22|PGs1","tubulin polyglutamylase complex subunit 1","protein-coding"]
[1244,"chr11",70431678,70433107,"+",0,"NA","promoter-TSS (NM_001271360)","promoter-TSS (NM_001271360)",-188,"NM_001271360",216869,"Mm.203747","NM_145429","ENSMUSG00000060216","Arrb2","AI326910|AW122872","arrestin, beta 2","protein-coding"]
[1638,"chr11",116671377,116672325,"+",0,"NA","promoter-TSS (NR_028569)","promoter-TSS (NR_028569)",191,"NR_027820",66293,"Mm.432051","NM_025472","ENSMUSG00000020812","1810032O08Rik","-","RIKEN cDNA 1810032O08 gene","ncRNA"]
[29,"chr1",23382801,23383838,"+",0,"NA","promoter-TSS (NM_001081079)","promoter-TSS (NM_001081079)",-144,"NM_001081079",70155,"Mm.28013","NM_001081079","ENSMUSG00000026158","Ogfrl1","2210417C17Rik","opioid growth factor receptor-like 1","protein-coding"]
[7816,"chr8",33599566,33600452,"+",0,"NA","exon (NM_017374, exon 1 of 7)","exon (NM_017374, exon 1 of 7)",388,"NM_017374",19053,"Mm.29301","NM_017374","ENSMUSG00000009630","Ppp2cb","AI115466|D8Ertd766e|PP2Ac","protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform","protein-coding"]
[5831,"chr4",132210640,132212633,"+",0,"NA","intron (NM_145393, intron 1 of 4)","CpG-10406",620,"NM_145393",213541,"Mm.23998","NM_145393","ENSMUSG00000040025","Ythdf2","9430020E02Rik|HGRG8|NY-REN-2","YTH domain family 2","protein-coding"]
[4087,"chr19",7480464,7484059,"+",0,"NA","intron (NM_001003934, intron 1 of 8)","intron (NM_001003934, intron 1 of 8)",1030,"NM_001271486",20168,"Mm.246990","NM_053076","ENSMUSG00000024758","Rtn3","RTN3-A1","reticulon 3","protein-coding"]
[1969,"chr12",111038591,111040361,"+",0,"NA","promoter-TSS (NM_198023)","promoter-TSS (NM_198023)",-322,"NM_198023",217864,"Mm.23808","NM_198023","ENSMUSG00000037896","Rcor1","5730409O11|6720480E22Rik|AU042633|D12Wsu95e|Rocr1|mKIAA0071","REST corepressor 1","protein-coding"]
[2203,"chr13",67359538,67360893,"+",0,"NA","intron (NM_001038651, intron 1 of 3)","intron (NM_001038651, intron 1 of 3)",357,"NM_001038651",629016,"Mm.440800","NM_001038651","ENSMUSG00000098905","Zfp953","E130120F12Rik","zinc finger protein 953","protein-coding"]
[6358,"chr5",115235767,115235996,"+",0,"NA","promoter-TSS (NM_026398)","promoter-TSS (NM_026398)",30,"NM_026398",117109,"Mm.24636","NM_026398","ENSMUSG00000060152","Pop5","1500019J17Rik|2700077E03Rik|AW049989|Rnasep3","processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)","protein-coding"]
[4358,"chr2",23070646,23070828,"+",0,"NA","intron (NM_001102436, intron 2 of 12)","intron (NM_001102436, intron 2 of 12)",1665,"NM_001102438",74159,"Mm.181973","NM_028793","ENSMUSG00000026781","Acbd5","1300014E15Rik","acyl-Coenzyme A binding domain containing 5","protein-coding"]
[2994,"chr16",4789460,4790705,"+",0,"NA","promoter-TSS (NM_025670)","promoter-TSS (NM_025670)",-147,"NM_025670",66626,"Mm.157648","NM_025670","ENSMUSG00000004071","Cdip1","2700048O17Rik|5730403B10Rik|AU018521|AW742692|CDIP","cell death inducing Trp53 target 1","protein-coding"]
[6587,"chr5",145083071,145086062,"+",0,"NA","intron (NM_019767, intron 1 of 9)","MIR|SINE|MIR",697,"NM_019767",56443,"Mm.371610","NM_019767","ENSMUSG00000029621","Arpc1a","0610010H08Rik|1110030K07Rik|41kDa|AA407347|Sid32|Sid329","actin related protein 2/3 complex, subunit 1A","protein-coding"]
[4003,"chr19",4305329,4306786,"+",0,"NA","5' UTR (NM_001290818, exon 1 of 21)","5' UTR (NM_001290818, exon 1 of 21)",165,"NM_130863",110355,"Mm.254144","NM_130863","ENSMUSG00000024858","Adrbk1","Adrbk-1|Bark-1|GRK2|beta ARK|betaARK1","adrenergic receptor kinase, beta 1","protein-coding"]
[4836,"chr2",152226175,152228079,"+",0,"NA","intron (NM_007788, intron 1 of 12)","CpG",287,"NM_007788",12995,"Mm.23692","NM_007788","ENSMUSG00000074698","Csnk2a1","Csnk2a1-rs4","casein kinase 2, alpha 1 polypeptide","protein-coding"]
[3844,"chr18",36678531,36680267,"+",0,"NA","promoter-TSS (NM_146085)","promoter-TSS (NM_146085)",-33,"NM_146085",225372,"Mm.89673","NM_146085","ENSMUSG00000006050","Apbb3","Fe65l2|Rirl2|TR2S","amyloid beta (A4) precursor protein-binding, family B, member 3","protein-coding"]
[3889,"chr18",56431210,56432818,"+",0,"NA","promoter-TSS (NM_026240)","promoter-TSS (NM_026240)",-118,"NM_026240",107022,"Mm.24356","NM_026240","ENSMUSG00000001700","Gramd3","9030613F08Rik|9130427A09Rik|AW061306|NS3TP2","GRAM domain containing 3","protein-coding"]
[2086,"chr13",38204411,38205312,"+",0,"NA","promoter-TSS (NM_026382)","promoter-TSS (NM_026382)",-78,"NM_026382",67797,"Mm.250783","NM_026382","ENSMUSG00000021431","Snrnp48","1110050F08Rik|6530403A03Rik|C6orf151","small nuclear ribonucleoprotein 48 (U11/U12)","protein-coding"]
[1322,"chr11",78465742,78466428,"+",0,"NA","intron (NM_026740, intron 1 of 4)","CpG",384,"NM_026740",52466,"Mm.131618","NM_026740","ENSMUSG00000020829","Slc46a1","1110002C08Rik|D11Ertd18e|HCP1|Pcft","solute carrier family 46, member 1","protein-coding"]
[7337,"chr7",48788590,48789616,"+",0,"NA","promoter-TSS (NM_028031)","promoter-TSS (NM_028031)",100,"NM_028031",243983,"Mm.279116","NM_028031","ENSMUSG00000030471","Zdhhc13","2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4","zinc finger, DHHC domain containing 13","protein-coding"]
[5804,"chr4",129246402,129249594,"+",0,"NA","intron (NM_001285867, intron 1 of 6)","intron (NM_001285867, intron 1 of 6)",445,"NM_001033189",97130,"Mm.331907","NM_001033189","ENSMUSG00000050390","C77080","Kiaa1522|mKIAA1522","expressed sequence C77080","protein-coding"]
[2699,"chr15",39943082,39944475,"+",0,"NA","promoter-TSS (NM_172814)","promoter-TSS (NM_172814)",-21,"NM_172814",239393,"Mm.39874","NM_172814","ENSMUSG00000022305","Lrp12","AI848829|C820005L12Rik|LRP-12","low density lipoprotein-related protein 12","protein-coding"]
[7398,"chr7",80534521,80535811,"+",0,"NA","promoter-TSS (NM_001042527)","promoter-TSS (NM_001042527)",-47,"NM_001042527",12144,"Mm.12932","NM_007550","ENSMUSG00000030528","Blm","-","Bloom syndrome, RecQ helicase-like","protein-coding"]
[1259,"chr11",72214501,72215848,"+",0,"NA","promoter-TSS (NM_001163728)","promoter-TSS (NM_001163728)",36,"NM_001163728",75304,"Mm.340776","NM_001163728",null,"4930563E22Rik","-","RIKEN cDNA 4930563E22 gene","protein-coding"]
[8694,"chr9",110655865,110657266,"+",0,"NA","promoter-TSS (NM_028312)","promoter-TSS (NM_028312)",62,"NM_028312",72654,"Mm.249115","NM_028312","ENSMUSG00000019659","Ccdc12","2700094L05Rik|C76605","coiled-coil domain containing 12","protein-coding"]
[5464,"chr4",21776338,21776761,"+",0,"NA","intron (NM_152825, intron 1 of 17)","CpG",279,"NM_152825",77593,"Mm.154306","NM_152825","ENSMUSG00000040455","Usp45","3110003C05Rik|4930550B20Rik|AI843191|Gcap7","ubiquitin specific petidase 45","protein-coding"]
[5401,"chr3",145937521,145938565,"+",0,"NA","promoter-TSS (NM_025555)","promoter-TSS (NM_025555)",11,"NM_025555",66421,"Mm.25137","NM_025555",null,"2410004B18Rik","4930572C24Rik","RIKEN cDNA 2410004B18 gene","protein-coding"]
[3475,"chr17",33394185,33395154,"+",0,"NA","promoter-TSS (NM_009542)","promoter-TSS (NM_009542)",-32,"NM_009542",22643,"Mm.4417","NM_009542","ENSMUSG00000055240","Zfp101","AI316498|AI325003","zinc finger protein 101","protein-coding"]
[4319,"chr2",5713444,5715936,"+",0,"NA","promoter-TSS (NM_001290374)","promoter-TSS (NM_001290374)",72,"NM_001290374",227541,"Mm.191949","NM_177343","ENSMUSG00000039145","Camk1d","A630059D12Rik|CKLiK|CaMKIdelta|E030025C11Rik|mCKLiK","calcium/calmodulin-dependent protein kinase ID","protein-coding"]
[8193,"chr8",121949458,121951526,"+",0,"NA","promoter-TSS (NM_001285983)","promoter-TSS (NM_001285983)",0,"NM_016812",53325,"Mm.287163","NM_016812","ENSMUSG00000025316","Banp","AA408158|SMAR1","BTG3 associated nuclear protein","protein-coding"]
[6327,"chr5",110386787,110386940,"+",0,"NA","intron (NM_001142642, intron 5 of 18)","CpG",264,"NM_028596",381668,"Mm.348782","NM_028596","ENSMUSG00000043323","Fbrsl1","2410025L10Rik|AI467568|Gm1049|Gm29766|mKIAA1545","fibrosin-like 1","protein-coding"]
[6894,"chr6",113325405,113327647,"+",0,"NA","promoter-TSS (NM_010957)","promoter-TSS (NM_010957)",-450,"NM_010957",18294,"Mm.43612","NM_010957","ENSMUSG00000030271","Ogg1","Mmh","8-oxoguanine DNA-glycosylase 1","protein-coding"]
[4902,"chr2",158793945,158795449,"+",0,"NA","promoter-TSS (NM_001291144)","promoter-TSS (NM_001291144)",-110,"NM_145742",71715,"Mm.315652","NM_145742","ENSMUSG00000027655","Dhx35","1200009D07Rik|Ddx35","DEAH (Asp-Glu-Ala-His) box polypeptide 35","protein-coding"]
[1203,"chr11",67530426,67533452,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-1059,"NM_008088",14457,"Mm.40338","NM_008088","ENSMUSG00000033066","Gas7","AW124766|B230343A10Rik|Gas7-cb","growth arrest specific 7","protein-coding"]
[4261,"chr19",46356518,46358018,"+",0,"NA","intron (NM_029186, intron 1 of 8)","intron (NM_029186, intron 1 of 8)",388,"NM_029186",75146,"Mm.159290","NM_029186","ENSMUSG00000025227","Tmem180","4930449A08Rik|4930538D17Rik","transmembrane protein 180","protein-coding"]
[4429,"chr2",30077726,30079201,"+",0,"NA","promoter-TSS (NM_153805)","promoter-TSS (NM_153805)",-303,"NM_153805",263803,"Mm.233843","NM_153805","ENSMUSG00000026785","Pkn3","AW209115|BC034126","protein kinase N3","protein-coding"]
[1354,"chr11",83471832,83473894,"+",0,"NA","promoter-TSS (NM_027427)","promoter-TSS (NM_027427)",-245,"NM_027427",70439,"Mm.181050","NM_027427","ENSMUSG00000020680","Taf15","2610111C21Rik|68kDa|TAFII68|Taf2n","TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor","protein-coding"]
[4066,"chr19",6305586,6310398,"+",0,"NA","intron (NM_001033342, intron 1 of 36)","intron (NM_001033342, intron 1 of 36)",1535,"NM_001033342",240505,"Mm.329622","NM_001033342","ENSMUSG00000024769","Cdc42bpg","BC046418|MRCKgamma","CDC42 binding protein kinase gamma (DMPK-like)","protein-coding"]
[8,"chr1",9627135,9633810,"+",0,"NA","intron (NR_015470, intron 1 of 4)","intron (NR_015470, intron 1 of 4)",620,"NR_015470",72481,"Mm.279818","NR_015470","ENSMUSG00000079671","2610203C22Rik","2310007M24Rik","RIKEN cDNA 2610203C22 gene","ncRNA"]
[7479,"chr7",101320908,101322521,"+",0,"NA","5' UTR (NM_019990, exon 2 of 7)","5' UTR (NM_019990, exon 2 of 7)",395,"NM_019990",56018,"Mm.28896","NM_019990","ENSMUSG00000030688","Stard10","AV048538|CGI-52|NY-C0-28|PC-TP2|PCTP2|Pctpl|Sdccag28|SdccagG28|TISP-81","START domain containing 10","protein-coding"]
[2359,"chr14",20545469,20546974,"+",0,"NA","promoter-TSS (NR_033571)","promoter-TSS (NR_033571)",-72,"NR_033571",75602,"Mm.437061","NR_033571","ENSMUSG00000084925","1810062O18Rik","-","RIKEN cDNA 1810062O18 gene","ncRNA"]
[6375,"chr5",117114910,117116932,"+",0,"NA","promoter-TSS (NM_001122666)","promoter-TSS (NM_001122666)",72,"NM_001122666",71954,"Mm.34456","NM_178622","ENSMUSG00000066900","Suds3","2400003N08Rik|2410008L21Rik|AU067672|mSds3","suppressor of defective silencing 3 homolog (S. cerevisiae)","protein-coding"]
[7790,"chr8",23207798,23208939,"+",0,"NA","promoter-TSS (NM_018743)","promoter-TSS (NM_018743)",85,"NM_018743",102247,"Mm.200898","NM_018743","ENSMUSG00000031545","Gpat4","AU041707|AW545732|Agpat6|Tsarg7","glycerol-3-phosphate acyltransferase 4","protein-coding"]
[4993,"chr2",181287115,181288943,"+",0,"NA","promoter-TSS (NM_198169)","promoter-TSS (NM_198169)",-63,"NM_198169",229004,"Mm.220423","NM_198169","ENSMUSG00000038705","Gmeb2","AI839884","glucocorticoid modulatory element binding protein 2","protein-coding"]
[8611,"chr9",104262356,104262886,"+",0,"NA","intron (NM_001163026, intron 1 of 55)","CpG",309,"NM_001163026",235567,"Mm.217256","NM_001163026","ENSMUSG00000032560","Dnajc13","D030002L11Rik|Gm1124|RME-8|Rme8|mKIAA0678","DnaJ (Hsp40) homolog, subfamily C, member 13","protein-coding"]
[6631,"chr6",7692088,7693148,"+",0,"NA","intron (NM_012055, intron 1 of 11)","intron (NM_012055, intron 1 of 11)",564,"NM_012055",27053,"Mm.2942","NM_012055","ENSMUSG00000029752","Asns","-","asparagine synthetase","protein-coding"]
[8577,"chr9",95953810,95955486,"+",0,"NA","promoter-TSS (NM_011916)","promoter-TSS (NM_011916)",-112,"NM_011916",24127,"Mm.291179","NM_011916","ENSMUSG00000032410","Xrn1","Dhm2|exo|mXrn1","5'-3' exoribonuclease 1","protein-coding"]
[8948,"chrX",151520004,151521959,"+",0,"NA","5' UTR (NM_001113354, exon 1 of 22)","5' UTR (NM_001113354, exon 1 of 22)",309,"NM_001113354",320595,"Mm.17156","NM_177201","ENSMUSG00000041229","Phf8","9830141C09Rik|mKIAA1111","PHD finger protein 8","protein-coding"]
[5215,"chr3",94371510,94371676,"+",0,"NA","Intergenic","Intergenic",-1201,"NM_011281",19885,"Mm.4372","NM_011281","ENSMUSG00000028150","Rorc","Nr1f3|RORgamma|TOR|Thor","RAR-related orphan receptor gamma","protein-coding"]
[5970,"chr4",148603662,148605091,"+",0,"NA","TTS (NM_010767)","TTS (NM_010767)",1832,"NM_001003893",17175,"Mm.378962","NM_010767","ENSMUSG00000028979","Masp2","MASP-2|MAp19","mannan-binding lectin serine peptidase 2","protein-coding"]
[4094,"chr19",8735297,8736309,"+",0,"NA","promoter-TSS (NM_134139)","promoter-TSS (NM_134139)",-36,"NM_134139",107071,"Mm.29627","NM_134139","ENSMUSG00000042729","Wdr74","5730436H21Rik|AA407588","WD repeat domain 74","protein-coding"]
[3540,"chr17",35841083,35842289,"+",0,"NA","intron (NM_001010833, intron 1 of 15)","CpG",188,"NM_001010833",240087,"Mm.218511","NM_001010833","ENSMUSG00000061607","Mdc1","6820401C03|AA413496|Nfbd1|mKIAA0170","mediator of DNA damage checkpoint 1","protein-coding"]
[6421,"chr5",123012938,123016895,"+",0,"NA","promoter-TSS (NM_175423)","promoter-TSS (NM_175423)",-158,"NM_175423",109305,"Mm.218582","NM_175423","ENSMUSG00000049686","Orai1","D730049H07Rik|Tmem142a|orai-1","ORAI calcium release-activated calcium modulator 1","protein-coding"]
[4704,"chr2",120312552,120316361,"+",0,"NA","promoter-TSS (NM_001024145)","promoter-TSS (NM_001024145)",-291,"NM_001024145",271844,"Mm.24880","NM_001024145","ENSMUSG00000046971","Pla2g4f","4732472I07Rik|Gm647|Pla2zeta","phospholipase A2, group IVF","protein-coding"]
[2394,"chr14",30825246,30826481,"+",0,"NA","exon (NM_028839, exon 1 of 8)","exon (NM_028839, exon 1 of 8)",269,"NM_028839",69179,"Mm.143025","NM_028839","ENSMUSG00000006526","Tmem110","1810038N08Rik|2310014H19Rik|AW554125","transmembrane protein 110","protein-coding"]
[1266,"chr11",73015216,73024445,"+",0,"NA","intron (NM_018883, intron 1 of 15)","intron (NM_018883, intron 1 of 15)",822,"NM_018883",55984,"Mm.9998","NM_018883","ENSMUSG00000020785","Camkk1","AI846603|CaMKKalpha|Camkk","calcium/calmodulin-dependent protein kinase kinase 1, alpha","protein-coding"]
[6578,"chr5",143731462,143733085,"+",0,"NA","promoter-TSS (NM_029749)","promoter-TSS (NM_029749)",7,"NM_029749",76800,"Mm.259620","NM_029749","ENSMUSG00000051306","Usp42","2410140K03Rik|3110031A07Rik|A630018G05Rik|D5Ertd591e","ubiquitin specific peptidase 42","protein-coding"]
[8789,"chrX",13845458,13847651,"+",0,"NA","promoter-TSS (NM_001284505)","promoter-TSS (NM_001284505)",2,"NM_001284505",12361,"Mm.327591","NM_009806","ENSMUSG00000031012","Cask","DXPri1|DXRib1|LIN-2|Pals3|mLin-2","calcium/calmodulin-dependent serine protein kinase (MAGUK family)","protein-coding"]
[3419,"chr17",27856590,27857220,"+",0,"NA","intron (NM_001080769, intron 1 of 20)","CpG",398,"NM_001080769",224648,"Mm.291291","NM_001080769","ENSMUSG00000039512","Uhrf1bp1","1110020K19Rik|AA408674|F830021D11Rik|mKIAA4127","UHRF1 (ICBP90) binding protein 1","protein-coding"]
[3326,"chr17",22423651,22424309,"+",0,"NA","promoter-TSS (NM_198003)","promoter-TSS (NM_198003)",-288,"NM_198003",74149,"Mm.30767","NM_198003","ENSMUSG00000071266","Zfp946","1300003B13Rik","zinc finger protein 946","protein-coding"]
[5433,"chr4",8689307,8691931,"+",0,"NA","5' UTR (NM_001277149, exon 1 of 38)","5' UTR (NM_001277149, exon 1 of 38)",213,"NM_001277149",320790,"Mm.138792","NM_001033395","ENSMUSG00000041235","Chd7","A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis","chromodomain helicase DNA binding protein 7","protein-coding"]
[4209,"chr19",40894485,40895153,"+",0,"NA","TTS (NR_106167)","TTS (NR_106167)",114,"NM_028319",72672,"Mm.313523","NM_028319","ENSMUSG00000049164","Zfp518a","2810401C22Rik|6330417C12Rik|AI426493|Zfp518|Znf518|Znf518a|mKIAA0335","zinc finger protein 518A","protein-coding"]
[4784,"chr2",132247247,132248398,"+",0,"NA","promoter-TSS (NM_027478)","promoter-TSS (NM_027478)",-34,"NM_001141971",70612,"Mm.30116","NM_027478","ENSMUSG00000027341","Tmem230","5730494N06Rik|AA407821","transmembrane protein 230","protein-coding"]
[7514,"chr7",109985452,109987011,"+",0,"NA","promoter-TSS (NM_153525)","promoter-TSS (NM_153525)",-1,"NM_153525",233724,"Mm.43212","NM_153525","ENSMUSG00000047554","Tmem41b","1500015G02Rik|1500031M19Rik|AU018901|D7Ertd70e|D7Ertd743e","transmembrane protein 41B","protein-coding"]
[39,"chr1",34158011,34162982,"+",0,"NA","exon (NM_010081, exon 1 of 24)","exon (NM_010081, exon 1 of 24)",166,"NM_010081",13518,"Mm.336625","NM_010081","ENSMUSG00000026131","Dst","2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339","dystonin","protein-coding"]
[558,"chr10",19712050,19713119,"+",0,"NA","promoter-TSS (NM_172786)","promoter-TSS (NM_172786)",-3,"NM_172786",237313,"Mm.234667","NM_172786","ENSMUSG00000020007","Il20ra","E230031K19","interleukin 20 receptor, alpha","protein-coding"]
[7854,"chr8",47351875,47352753,"+",0,"NA","promoter-TSS (NM_175162)","promoter-TSS (NM_175162)",34,"NM_175162",71069,"Mm.23973","NM_175162","ENSMUSG00000038143","Stox2","4933409N07Rik|AI449080|AI835114|mKIAA1392","storkhead box 2","protein-coding"]
[8806,"chrX",36742672,36743988,"+",0,"NA","promoter-TSS (NM_001085497)","promoter-TSS (NM_001085497)",-302,"NR_075097",194744,"Mm.336014","NM_001085497","ENSMUSG00000037636","Slc25a43","Gm8","solute carrier family 25, member 43","protein-coding"]
[8091,"chr8",105496648,105497531,"+",0,"NA","promoter-TSS (NM_175160)","promoter-TSS (NM_175160)",-219,"NM_175160",70796,"Mm.100917","NM_175160","ENSMUSG00000039199","Zdhhc1","4432412D04Rik","zinc finger, DHHC domain containing 1","protein-coding"]
[7184,"chr7",28013458,28014638,"+",0,"NA","promoter-TSS (NM_001254951)","promoter-TSS (NM_001254951)",67,"NM_001254951",100043772,"Mm.129275","NM_001100456",null,"Zfp850","C130069I09Rik|Gm4636","zinc finger protein 850","protein-coding"]
[6101,"chr5",29734884,29737277,"+",0,"NA","promoter-TSS (NR_028426)","promoter-TSS (NR_028426)",-144,"NR_028426",332993,"Mm.473746","NR_028426",null,"Gm5129","EG332993|ENSMUSG00000053121","predicted gene 5129","ncRNA"]
[4570,"chr2",76370082,76370519,"+",0,"NA","exon (NM_153405, exon 1 of 10)","exon (NM_153405, exon 1 of 10)",316,"NM_153405",241490,"Mm.33310","NM_153405","ENSMUSG00000042369","Rbm45","Drb1|Drbp1|G430095G15Rik","RNA binding motif protein 45","protein-coding"]
[2350,"chr14",18893169,18894360,"+",0,"NA","promoter-TSS (NM_144839)","promoter-TSS (NM_144839)",-137,"NM_144839",218793,"Mm.23551","NM_144839","ENSMUSG00000058317","Ube2e2","BC016265","ubiquitin-conjugating enzyme E2E 2","protein-coding"]
[2479,"chr14",54913911,54914560,"+",0,"NA","Intergenic","RSINE1|SINE|B4",-1103,"NM_021551",59049,"Mm.27435","NM_021551","ENSMUSG00000022199","Slc22a17","1700094C23Rik|24p3R|AU041908|AW555662|BOIT|Boct|mBOCT","solute carrier family 22 (organic cation transporter), member 17","protein-coding"]
[1,"chr1",4807446,4808296,"+",0,"NA","promoter-TSS (NM_008866)","promoter-TSS (NM_008866)",-22,"NM_008866",18777,"Mm.299955","NM_008866","ENSMUSG00000025903","Lypla1","Pla1a","lysophospholipase 1","protein-coding"]
[506,"chr1",193172964,193174576,"+",0,"NA","5' UTR (NM_181048, exon 1 of 2)","5' UTR (NM_181048, exon 1 of 2)",193,"NM_181048",319266,"Mm.482460","NM_181048","ENSMUSG00000079144","A130010J15Rik","-","RIKEN cDNA A130010J15 gene","protein-coding"]
[5929,"chr4",139622238,139623372,"+",0,"NA","promoter-TSS (NM_175438)","promoter-TSS (NM_175438)",-89,"NM_175438",212647,"Mm.273571","NM_175438","ENSMUSG00000028737","Aldh4a1","A930035F14Rik|Ahd-1|Ahd1|Aldh4|Aldh5a1|E330022C09|P5cd|P5cdh|P5cdhl|P5cdhs|Ssdh1","aldehyde dehydrogenase 4 family, member A1","protein-coding"]
[5554,"chr4",53439539,53441719,"+",0,"NA","5' UTR (NM_133891, exon 1 of 16)","5' UTR (NM_133891, exon 1 of 16)",216,"NM_133891",100434,"Mm.482207","NM_133891","ENSMUSG00000028412","Slc44a1","2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92","solute carrier family 44, member 1","protein-coding"]
[4184,"chr19",34007744,34008629,"+",0,"NA","promoter-TSS (NM_172837)","promoter-TSS (NM_172837)",-68,"NM_172837",240633,"Mm.58924","NM_172837","ENSMUSG00000024771","Lipk","9930115F20|BC055815|Lipl2","lipase, family member K","protein-coding"]
[7950,"chr8",72443400,72445238,"+",0,"NA","promoter-TSS (NM_028500)","promoter-TSS (NM_028500)",439,"NM_028170",72254,"Mm.30136","NM_028170","ENSMUSG00000052794","1700030K09Rik","-","RIKEN cDNA 1700030K09 gene","protein-coding"]
[8100,"chr8",105859995,105861463,"+",0,"NA","promoter-TSS (NR_033574)","promoter-TSS (NR_033574)",69,"NR_033574",100043462,"Mm.269188","NR_033574","ENSMUSG00000071497","Nutf2-ps1","ENSMUSG00000071497|Gm10333|Ntf2|Nutf2","nuclear transport factor 2, pseudogene 1","pseudo"]
[7583,"chr7",126474156,126475755,"+",0,"NA","5' UTR (NM_011363, exon 1 of 10)","5' UTR (NM_011363, exon 1 of 10)",175,"NM_001289538",20399,"Mm.8538","NM_011363","ENSMUSG00000030733","Sh2b1","AI425885|C530001K22Rik|Irip|Psm|SH2-B|SH2-Bb|Sh2bpsm1|mKIAA1299","SH2B adaptor protein 1","protein-coding"]
[8600,"chr9",102625441,102627105,"+",0,"NA","promoter-TSS (NM_001301689)","promoter-TSS (NM_001301689)",-23,"NM_181394",69010,"Mm.2000","NM_181394","ENSMUSG00000035048","Anapc13","1810004D07Rik|APC13|SWM1","anaphase promoting complex subunit 13","protein-coding"]
[2845,"chr15",81663979,81664573,"+",0,"NA","intron (NM_001289712, intron 1 of 16)","intron (NM_001289712, intron 1 of 16)",387,"NR_110362",214669,"Mm.280768","NM_145993","ENSMUSG00000022394","L3mbtl2","4732493N06Rik|M4mbt","l(3)mbt-like 2 (Drosophila)","protein-coding"]
[8537,"chr9",77754578,77755464,"+",0,"NA","intron (NM_010295, intron 1 of 15)","CpG",486,"NM_010295",14629,"Mm.89888","NM_010295","ENSMUSG00000032350","Gclc","D9Wsu168e|GLCL-H|Ggcs-hs|Glclc","glutamate-cysteine ligase, catalytic subunit","protein-coding"]
[581,"chr10",30617007,30619052,"+",0,"NA","intron (NM_025798, intron 1 of 4)","intron (NM_025798, intron 1 of 4)",337,"NM_025798",66847,"Mm.46218","NM_025798",null,"Hint3","0610010I17Rik|AV009015|HINT-3|HINT-4|HINT4","histidine triad nucleotide binding protein 3","protein-coding"]
[4676,"chr2",118388672,118389188,"+",0,"NA","promoter-TSS (NM_001177806)","promoter-TSS (NM_001177806)",-182,"NM_001177806",27103,"Mm.217616","NM_013719","ENSMUSG00000005102","Eif2ak4","2610011M03|GCN2|MGCN2","eukaryotic translation initiation factor 2 alpha kinase 4","protein-coding"]
[4200,"chr19",38042292,38043783,"+",0,"NA","intron (NM_001099634, intron 1 of 52)","intron (NM_001099634, intron 1 of 52)",540,"NM_001099634",226101,"Mm.34674","NM_177035","ENSMUSG00000048612","Myof","2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3","myoferlin","protein-coding"]
[678,"chr10",67002110,67004405,"+",0,"NA","Intergenic","Intergenic",-1818,"NR_110511",102634101,"Mm.445258","NR_110511",null,"Gm31763","-","predicted gene, 31763","ncRNA"]
[3862,"chr18",42051644,42058704,"+",0,"NA","intron (NM_172966, intron 1 of 7)","intron (NM_172966, intron 1 of 7)",1464,"NM_001146299",269016,"Mm.45472","NM_172966","ENSMUSG00000057719","Sh3rf2","2310046K19|9130023G24Rik|AI452083|Ppp1r39|RNF158","SH3 domain containing ring finger 2","protein-coding"]
[1517,"chr11",101463784,101466537,"+",0,"NA","intron (NM_012037, intron 1 of 5)","intron (NM_012037, intron 1 of 5)",1039,"NM_012037",26949,"Mm.29210","NM_012037","ENSMUSG00000034993","Vat1","VAT-1","vesicle amine transport protein 1 homolog (T californica)","protein-coding"]
[8941,"chrX",142965970,142966777,"+",0,"NA","exon (NM_019496, exon 1 of 6)","exon (NM_019496, exon 1 of 6)",355,"NM_019496",56068,"Mm.143724","NM_019496",null,"Ammecr1","6230420G18Rik","Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1","protein-coding"]
[2808,"chr15",78803655,78804587,"+",0,"NA","Intergenic","Intergenic",-1079,"NM_130859",105844,"Mm.17629","NM_130859","ENSMUSG00000033170","Card10","AI449026|Bimp1|Carma3","caspase recruitment domain family, member 10","protein-coding"]
[1975,"chr12",111712322,111713698,"+",0,"NA","promoter-TSS (NM_001163388)","promoter-TSS (NM_001163388)",246,"NM_027404",70369,"Mm.44239","NM_027404","ENSMUSG00000049792","Bag5","1600025G07Rik|4930405J06Rik","BCL2-associated athanogene 5","protein-coding"]
[1973,"chr12",111573472,111575989,"+",0,"NA","promoter-TSS (NR_045295)","promoter-TSS (NR_045295)",220,"NM_022801",17169,"Mm.260504","NM_021516","ENSMUSG00000007411","Mark3","1600015G02Rik|A430080F22Rik|C-TAK1|ETK-1|ETK1|Emk2|MPK10","MAP/microtubule affinity regulating kinase 3","protein-coding"]
[8214,"chr8",123653913,123655426,"+",0,"NA","intron (NM_133955, intron 1 of 2)","intron (NM_133955, intron 1 of 2)",740,"NM_133955",69581,"Mm.168257","NM_133955","ENSMUSG00000039960","Rhou","2310026M05Rik|AI182090|Arhu|CDC42L1|G28K|WRCH-1|WRCH1|mG28K","ras homolog gene family, member U","protein-coding"]
[6797,"chr6",72615535,72617508,"+",0,"NA","intron (NM_009443, intron 1 of 3)","CpG",227,"NM_009444",22135,"Mm.246563","NM_009444",null,"Tgoln2","TGN38B|TGN41|TGN46|Ttgn2","trans-golgi network protein 2","protein-coding"]
[2302,"chr13",104816387,104817470,"+",0,"NA","promoter-TSS (NM_026072)","promoter-TSS (NM_026072)",25,"NM_026072",67285,"Mm.235398","NM_026072","ENSMUSG00000021715","Cwc27","3110009E13Rik|NY-CO-10|Sdccag10","CWC27 spliceosome-associated protein homolog (S. cerevisiae)","protein-coding"]
[4827,"chr2",150909395,150910283,"+",0,"NA","intron (NM_027014, intron 1 of 6)","intron (NM_027014, intron 1 of 6)",245,"NM_001163476",69270,"Mm.271603","NM_027014","ENSMUSG00000027454","Gins1","2810418N01Rik|Gins4|PSF1|mKIAA0186","GINS complex subunit 1 (Psf1 homolog)","protein-coding"]
[3849,"chr18",36792956,36794406,"+",0,"NA","promoter-TSS (NM_025594)","promoter-TSS (NM_025594)",-242,"NM_025594",66492,"Mm.251155","NM_025594","ENSMUSG00000001383","Zmat2","2610510D14Rik|2900082I05Rik","zinc finger, matrin type 2","protein-coding"]
[2745,"chr15",73060422,73061088,"+",0,"NA","intron (NM_001164641, intron 1 of 17)","intron (NM_001164641, intron 1 of 17)",449,"NM_001164641",76510,"Mm.158902","NM_029640","ENSMUSG00000047921","Trappc9","1810044A24Rik|2900005P22Rik|4632408O18Rik|Ibp|Nibp|TRS130|mKIAA1882","trafficking protein particle complex 9","protein-coding"]
[8776,"chrX",8251923,8252671,"+",0,"NA","5' UTR (NM_001290430, exon 1 of 13)","5' UTR (NM_001290430, exon 1 of 13)",109,"NM_133991",54632,"Mm.327529","NM_133991","ENSMUSG00000031171","Ftsj1","AI931847|Ftsj|Ftsjl|Sfc12","FtsJ homolog 1 (E. coli)","protein-coding"]
[8711,"chr9",118505960,118507932,"+",0,"NA","intron (NM_018748, intron 1 of 23)","CpG",628,"NM_018748",54214,"Mm.10409","NM_018748","ENSMUSG00000038708","Golga4","AI225887|AU019508|Olp-1","golgi autoantigen, golgin subfamily a, 4","protein-coding"]
[2400,"chr14",31205608,31207143,"+",0,"NA","intron (NM_022656, intron 1 of 20)","CpG",451,"NM_022656",64652,"Mm.298728","NM_022656","ENSMUSG00000021910","Nisch","1200007D05Rik|3202002H23Rik|AW494485|I-1","nischarin","protein-coding"]
[2034,"chr13",21506584,21506975,"+",0,"NA","promoter-TSS (NR_026798)","promoter-TSS (NR_026798)",-255,"NR_026798",100038371,"Mm.133328","NR_026798",null,"Zfp389","ENSMUSG00000075041|OTTMUSG00000018077","zinc finger protein 389","pseudo"]
[4405,"chr2",27008894,27010517,"+",0,"NA","promoter-TSS (NM_029862)","promoter-TSS (NM_029862)",-221,"NM_001243240",381356,"Mm.150270","NM_029862","ENSMUSG00000015488","Cacfd1","5930434B04Rik|mFwe","calcium channel flower domain containing 1","protein-coding"]
[2029,"chr13",21402087,21402740,"+",0,"NA","intron (NM_001145778, intron 1 of 5)","intron (NM_001145778, intron 1 of 5)",342,"NM_001145778",72739,"Mm.296071","NM_023685","ENSMUSG00000021327","Zkscan3","2810435N07Rik|AA408594|AI132359|Skz1|Zf47|Zfp-47|Zfp306|Zfp307|mszf35","zinc finger with KRAB and SCAN domains 3","protein-coding"]
[3552,"chr17",36121686,36122153,"+",0,"NA","promoter-TSS (NR_046286)","promoter-TSS (NR_046286)",-475,"NR_046286",15024,"Mm.426031","NM_010395","ENSMUSG00000079491","H2-T10","H-2T10","histocompatibility 2, T region locus 10","protein-coding"]
[5671,"chr4",109413848,109414349,"+",0,"NA","intron (NM_153392, intron 1 of 17)","RSINE1|SINE|B4",-1549,"NM_001145948",230603,"Mm.33091","NM_153392","ENSMUSG00000028555","Ttc39a","4922503N01Rik","tetratricopeptide repeat domain 39A","protein-coding"]
[8153,"chr8",111853121,111854923,"+",0,"NA","intron (NM_011801, intron 1 of 6)","CpG",288,"NM_011801",23837,"Mm.279437","NM_011801","ENSMUSG00000031954","Cfdp1","AA408409|Bcnt|Bucentaur|Cfdp|cp27","craniofacial development protein 1","protein-coding"]
[2723,"chr15",58134314,58135711,"+",0,"NA","promoter-TSS (NM_027435)","promoter-TSS (NM_027435)",70,"NM_027435",70472,"Mm.221758","NM_027435","ENSMUSG00000022360","Atad2","2610509G12Rik","ATPase family, AAA domain containing 2","protein-coding"]
[4218,"chr19",41911466,41913899,"+",0,"NA","intron (NM_023418, intron 1 of 3)","intron (NM_023418, intron 1 of 3)",811,"NM_023418",18648,"Mm.16783","NM_023418","ENSMUSG00000011752","Pgam1","2310050F24Rik|Pgam-1","phosphoglycerate mutase 1","protein-coding"]
[775,"chr10",81232658,81234731,"+",0,"NA","intron (NM_001034895, intron 1 of 17)","intron (NM_001034895, intron 1 of 17)",531,"NM_001034895",103406,"Mm.158783","NM_001034895","ENSMUSG00000034949","Zfr2","2010013I23Rik|9130206N08Rik|AW045600|mKIAA1086","zinc finger RNA binding protein 2","protein-coding"]
[5668,"chr4",109201486,109203191,"+",0,"NA","promoter-TSS (NM_133885)","promoter-TSS (NM_133885)",-66,"NM_133885",100273,"Mm.366315","NM_133885","ENSMUSG00000028559","Osbpl9","2600011I06Rik|AU015843|Orp-9","oxysterol binding protein-like 9","protein-coding"]
[20,"chr1",16519053,16520061,"+",0,"NA","promoter-TSS (NM_001111272)","promoter-TSS (NM_001111272)",-255,"NM_001111272",29819,"Mm.216257","NM_025303","ENSMUSG00000025920","Stau2","-","staufen (RNA binding protein) homolog 2 (Drosophila)","protein-coding"]
[1983,"chr12",112672652,112676187,"+",0,"NA","promoter-TSS (NM_001165894)","promoter-TSS (NM_001165894)",-143,"NM_009652",11651,"Mm.6645","NM_009652","ENSMUSG00000001729","Akt1","Akt|PKB|PKB/Akt|PKBalpha|Rac","thymoma viral proto-oncogene 1","protein-coding"]
[4304,"chr19",60872173,60875000,"+",0,"NA","intron (NM_007452, intron 1 of 6)","intron (NM_007452, intron 1 of 6)",952,"NM_007452",11757,"Mm.29821","NM_007452","ENSMUSG00000024997","Prdx3","AW822249|Aop1|D0Tohi1|Ef2l|Mer5|Prx3|SP22|TDXM","peroxiredoxin 3","protein-coding"]
[4180,"chr19",32485255,32486065,"+",0,"NA","promoter-TSS (NM_010799)","promoter-TSS (NM_010799)",-109,"NM_010799",17330,"Mm.255116","NM_010799","ENSMUSG00000024896","Minpp1","AA408516","multiple inositol polyphosphate histidine phosphatase 1","protein-coding"]
[4139,"chr19",17393430,17394681,"+",0,"NA","promoter-TSS (NM_019437)","promoter-TSS (NM_019437)",12,"NM_019437",54391,"Mm.7013","NM_019437","ENSMUSG00000024712","Rfk","0610038L10Rik|AF031381|KOI-4","riboflavin kinase","protein-coding"]
[468,"chr1",182019046,182020277,"+",0,"NA","5' UTR (NM_008680, exon 1 of 15)","5' UTR (NM_008680, exon 1 of 15)",319,"NM_008680",13800,"Mm.87759","NM_008680","ENSMUSG00000022995","Enah","Mena|NDPP-1|Ndpp1|WBP8","enabled homolog (Drosophila)","protein-coding"]
[3030,"chr16",13671436,13672544,"+",0,"NA","promoter-TSS (NM_025653)","promoter-TSS (NM_025653)",-30,"NM_025653",66598,"Mm.223689","NM_025653","ENSMUSG00000079737","3110001I22Rik","-","RIKEN cDNA 3110001I22 gene","protein-coding"]
[7247,"chr7",34195296,34197219,"+",0,"NA","intron (NM_026549, intron 2 of 6)","CpG",390,"NM_026549",68079,"Mm.38173","NM_026549","ENSMUSG00000002635","Pdcd2l","6030457N17Rik","programmed cell death 2-like","protein-coding"]
[78,"chr1",43444546,43446775,"+",0,"NA","promoter-TSS (NM_010879)","promoter-TSS (NM_010879)",-91,"NM_010879",17974,"Mm.389903","NM_010879","ENSMUSG00000066877","Nck2","4833426I10Rik|Grb4|NCKbeta|Nck-2","non-catalytic region of tyrosine kinase adaptor protein 2","protein-coding"]
[6612,"chr5",149678225,149678440,"+",0,"NA","promoter-TSS (NM_001081204)","promoter-TSS (NM_001081204)",75,"NM_001081204",381694,"Mm.45060","NM_001081204","ENSMUSG00000051950","B3glct","B3galtl|Gm1057","beta-3-glucosyltransferase","protein-coding"]
[5571,"chr4",59547785,59550007,"+",0,"NA","intron (NM_144904, intron 1 of 14)","CpG",468,"NM_178164",230257,"Mm.331640","NM_144904","ENSMUSG00000028382","Ptbp3","5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1","polypyrimidine tract binding protein 3","protein-coding"]
[413,"chr1",171269863,171271445,"+",0,"NA","intron (NM_020579, intron 1 of 7)","CpG",326,"NM_020579",57370,"Mm.274011","NM_020579","ENSMUSG00000052423","B4galt3","9530061M23Rik|AA104562|AW125175|ESTM26|ESTM6|R74981","UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3","protein-coding"]
[294,"chr1",131244042,131246505,"+",0,"NA","promoter-TSS (NM_001313731)","promoter-TSS (NM_001313731)",-95,"NM_001313731",54354,"Mm.248291","NM_018750","ENSMUSG00000026430","Rassf5","1300019G20Rik|Maxp1|Nore1|Nore1A|Nore1B|Rapl","Ras association (RalGDS/AF-6) domain family member 5","protein-coding"]
[764,"chr10",80656127,80659379,"+",0,"NA","promoter-TSS (NM_145361)","promoter-TSS (NM_145361)",-682,"NM_145361",208198,"Mm.60720","NM_145361","ENSMUSG00000003344","Btbd2","2610037C03Rik|4930512K17Rik","BTB (POZ) domain containing 2","protein-coding"]
[7575,"chr7",125490499,125492549,"+",0,"NA","promoter-TSS (NM_026330)","promoter-TSS (NM_026330)",18,"NM_026330",67711,"Mm.4467","NM_026330","ENSMUSG00000030750","Nsmce1","2510027N19Rik","non-SMC element 1 homolog (S. cerevisiae)","protein-coding"]
[2075,"chr13",34162609,34163654,"+",0,"NA","exon (NM_001101430, exon 1 of 3)","exon (NM_001101430, exon 1 of 3)",167,"NM_001110515",69666,"Mm.24788","NM_001101430","ENSMUSG00000071451","Psmg4","PAC-4|mPAC4","proteasome (prosome, macropain) assembly chaperone 4","protein-coding"]
[4582,"chr2",83723547,83725650,"+",0,"NA","5' UTR (NM_008402, exon 1 of 30)","5' UTR (NM_008402, exon 1 of 30)",201,"NM_008402",16410,"Mm.227","NM_008402","ENSMUSG00000027087","Itgav","1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik","integrin alpha V","protein-coding"]
[1981,"chr12",112620225,112620449,"+",0,"NA","intron (NM_007421, intron 1 of 12)","CpG",290,"NM_007421",11565,"Mm.3440","NM_007421","ENSMUSG00000011148","Adssl1","AI528595|Adss|Adss1","adenylosuccinate synthetase like 1","protein-coding"]
[7634,"chr7",128001716,128006482,"+",0,"NA","promoter-TSS (NM_001079932)","promoter-TSS (NM_001079932)",-279,"NM_001079932",434246,"Mm.389924","NM_001079932","ENSMUSG00000042828","Trim72","BC067209|MG53","tripartite motif-containing 72","protein-coding"]
[8754,"chr9",124422666,124426550,"+",0,"NA","non-coding (NR_102721, exon 2 of 2)","non-coding (NR_102721, exon 2 of 2)",821,"NR_015516",75135,"Mm.476814","NR_015516",null,"4930526I15Rik","1600027J15Rik","RIKEN cDNA 4930526I15 gene","ncRNA"]
[3559,"chr17",37045140,37045421,"+",0,"NA","promoter-TSS (NM_019439)","promoter-TSS (NM_019439)",-686,"NM_019439",54393,"Mm.32191","NM_019439","ENSMUSG00000024462","Gabbr1","GABAB1|GABAbR1|bM573K1.1","gamma-aminobutyric acid (GABA) B receptor, 1","protein-coding"]
[2522,"chr14",60784671,60785007,"+",0,"NA","exon (NM_027436, exon 1 of 19)","exon (NM_027436, exon 1 of 19)",273,"NR_040642",70478,"Mm.274650","NM_027436","ENSMUSG00000021993","Mipep","5730405E07Rik|MIP","mitochondrial intermediate peptidase","protein-coding"]
[5922,"chr4",139091993,139096055,"+",0,"NA","Intergenic","Intergenic",-1054,"NM_008675",17965,"Mm.9404","NM_008675","ENSMUSG00000041120","Nbl1","D4H1S1733E|DAN|Dana|NO3","neuroblastoma, suppression of tumorigenicity 1","protein-coding"]
[8649,"chr9",107950643,107951391,"+",0,"NA","promoter-TSS (NM_011634)","promoter-TSS (NM_011634)",54,"NM_011634",22036,"Mm.297870","NM_011634","ENSMUSG00000032586","Traip","Trip","TRAF-interacting protein","protein-coding"]
[7777,"chr8",22060808,22060986,"+",0,"NA","promoter-TSS (NM_007511)","promoter-TSS (NM_007511)",176,"NM_183142",207958,"Mm.267439","NM_183142","ENSMUSG00000063362","Alg11","AI849156|AW492253|B230397C21|Mmat-4(5)","asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase)","protein-coding"]
[6220,"chr5",72559107,72560233,"+",0,"NA","promoter-TSS (NM_133921)","promoter-TSS (NM_133921)",-25,"NM_133921",100978,"Mm.187453","NM_133921","ENSMUSG00000072889","Nfxl1","1700012H24Rik|AW538212|D430033A06Rik|DNABF|GCF|Gm1058|TCF9","nuclear transcription factor, X-box binding-like 1","protein-coding"]
[8519,"chr9",72110742,72112380,"+",0,"NA","promoter-TSS (NM_001253862)","promoter-TSS (NM_001253862)",258,"NM_011544",21406,"Mm.171615","NM_011544","ENSMUSG00000032228","Tcf12","A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20","transcription factor 12","protein-coding"]
[2583,"chr14",76008603,76010857,"+",0,"NA","intron (NM_026816, intron 1 of 7)","intron (NM_026816, intron 1 of 7)",1135,"NM_026816",68705,"Mm.20415","NM_026816","ENSMUSG00000067995","Gtf2f2","1110031C13Rik|AI326315","general transcription factor IIF, polypeptide 2","protein-coding"]
[2589,"chr14",78535557,78537613,"+",0,"NA","intron (NM_001164503, intron 1 of 11)","CpG",275,"NM_001164503",219181,"Mm.89413","NM_001164503","ENSMUSG00000022016","Akap11","6330501D17Rik|AKAP220|Gm80|PRKA11|mKIAA0629","A kinase (PRKA) anchor protein 11","protein-coding"]
[2814,"chr15",79027715,79031249,"+",0,"NA","3' UTR (NM_008197, exon 1 of 1)","3' UTR (NM_008197, exon 1 of 1)",1270,"NM_008197",14958,"Mm.24350","NM_008197","ENSMUSG00000096210","H1f0","D130017D06Rik|H1(0)|H1fv","H1 histone family, member 0","protein-coding"]
[710,"chr10",77515310,77516896,"+",0,"NA","promoter-TSS (NM_133998)","promoter-TSS (NM_133998)",-290,"NM_133998",108707,"Mm.259547","NM_133998","ENSMUSG00000032977","Fam207a","1810008A18Rik|AI303072","family with sequence similarity 207, member A","protein-coding"]
[7603,"chr7",127194920,127196723,"+",0,"NA","5' UTR (NM_001285907, exon 1 of 7)","5' UTR (NM_001285907, exon 1 of 7)",256,"NM_001285907",70233,"Mm.28050","NM_027353","ENSMUSG00000042502","Cd2bp2","1500011B02Rik|2410024K20Rik|AW048183","CD2 antigen (cytoplasmic tail) binding protein 2","protein-coding"]
[7087,"chr7",16272995,16275699,"+",0,"NA","promoter-TSS (NM_001136270)","promoter-TSS (NM_001136270)",-655,"NM_001136270",66300,"Mm.218698","NM_001136270","ENSMUSG00000091811","Inafm1","2610014I16Rik|Prr24","InaF motif containing 1","protein-coding"]
[5105,"chr3",67514754,67516535,"+",0,"NA","promoter-TSS (NM_001164763)","promoter-TSS (NM_001164763)",-121,"NM_001164763",109222,"Mm.38002","NM_001164763","ENSMUSG00000049404","Rarres1","5430417P09Rik|AI662122","retinoic acid receptor responder (tazarotene induced) 1","protein-coding"]
[112,"chr1",57969517,57969977,"+",0,"NA","promoter-TSS (NR_027630)","promoter-TSS (NR_027630)",-223,"NR_027630",51960,"Mm.339711","NM_030211","ENSMUSG00000054770","Kctd18","4932411A20Rik|6530404F10Rik","potassium channel tetramerisation domain containing 18","protein-coding"]
[5935,"chr4",141060036,141061272,"+",0,"NA","promoter-TSS (NM_001145958)","promoter-TSS (NM_001145958)",-109,"NM_001145958",230872,"Mm.80685","NM_172122","ENSMUSG00000040860","Crocc","-","ciliary rootlet coiled-coil, rootletin","protein-coding"]
[588,"chr10",34296995,34298049,"+",0,"NA","exon (NM_030203, exon 1 of 1)","exon (NM_030203, exon 1 of 1)",101,"NM_030203",72480,"Mm.21485","NM_030203","ENSMUSG00000039485","Tspyl4","2610102M01Rik|B230210I21Rik|D10Bwg0791e","TSPY-like 4","protein-coding"]
[1684,"chr11",120672592,120673925,"+",0,"NA","intron (NM_026877, intron 1 of 15)","CpG",285,"NM_026877",68938,"Mm.294020","NM_026877","ENSMUSG00000025142","Aspscr1","1190006K01Rik|ASPC|ASPCR1|ASPL|ASPS|RCC17|TUG","alveolar soft part sarcoma chromosome region, candidate 1 (human)","protein-coding"]
[5097,"chr3",63928994,63929327,"+",0,"NA","intron (NM_177856, intron 1 of 4)","CpG",225,"NM_177856",329659,"Mm.39342","NM_177856","ENSMUSG00000048581","E130311K13Rik","-","RIKEN cDNA E130311K13 gene","protein-coding"]
[756,"chr10",80387195,80388143,"+",0,"NA","promoter-TSS (NM_198615)","promoter-TSS (NM_198615)",-18,"NM_198615",237400,"Mm.268389","NM_198615","ENSMUSG00000048696","Mex3d","BC059858|Rkhd1","mex3 homolog D (C. elegans)","protein-coding"]
[4422,"chr2",29826579,29827877,"+",0,"NA","promoter-TSS (NM_026615)","promoter-TSS (NM_026615)",-161,"NM_026615",68205,"Mm.20273","NM_026615","ENSMUSG00000069020","Urm1","2900073H19Rik","ubiquitin related modifier 1 homolog (S. cerevisiae)","protein-coding"]
[8851,"chrX",73228092,73229085,"+",0,"NA","exon (NM_007978, exon 1 of 1)","exon (NM_007978, exon 1 of 1)",282,"NM_007978",14070,"Mm.165807","NM_007978","ENSMUSG00000078317","F8a","AI852759|DXUcsf1|F8a1","factor 8-associated gene A","protein-coding"]
[6257,"chr5",91074755,91075359,"+",0,"NA","intron (NM_007950, intron 1 of 4)","intron (NM_007950, intron 1 of 4)",440,"NM_007950",13874,"Mm.4791","NM_007950","ENSMUSG00000029377","Ereg","EPR","epiregulin","protein-coding"]
[2590,"chr14",78848465,78849532,"+",0,"NA","promoter-TSS (NM_027906)","promoter-TSS (NM_027906)",-180,"NM_027906",219189,"Mm.159651","NM_027906","ENSMUSG00000058997","Vwa8","1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564","von Willebrand factor A domain containing 8","protein-coding"]
[542,"chr10",13868023,13870494,"+",0,"NA","promoter-TSS (NM_025446)","promoter-TSS (NM_025446)",-428,"NM_025446",66253,"Mm.45755","NM_025446","ENSMUSG00000019806","Aig1","1500031O19Rik|AV064870|AW413422|CGI-103","androgen-induced 1","protein-coding"]
[3750,"chr18",5333897,5334795,"+",0,"NA","promoter-TSS (NM_178722)","promoter-TSS (NM_178722)",93,"NM_178722",240186,"Mm.118257","NM_178722","ENSMUSG00000050945","Zfp438","9430031G09|9430091M14Rik|B830013J05Rik","zinc finger protein 438","protein-coding"]
[3114,"chr16",30387692,30390528,"+",0,"NA","promoter-TSS (NM_001128094)","promoter-TSS (NM_001128094)",-580,"NM_001128096",224088,"Mm.8924","NM_001128094","ENSMUSG00000022533","Atp13a3","AU022875|Gm1745|Gm541|Gm542","ATPase type 13A3","protein-coding"]
[7845,"chr8",45999352,46000766,"+",0,"NA","promoter-TSS (NM_001039562)","promoter-TSS (NM_001039562)",-209,"NM_001039562",654824,"Mm.334517","NM_001039562","ENSMUSG00000050914","Ankrd37","-","ankyrin repeat domain 37","protein-coding"]
[5337,"chr3",121290781,121292681,"+",0,"NA","promoter-TSS (NM_024178)","promoter-TSS (NM_024178)",-86,"NM_024178",66789,"Mm.269881","NM_024178","ENSMUSG00000039887","Alg14","5430428G01Rik|AI854024","asparagine-linked glycosylation 14","protein-coding"]
[8073,"chr8",95886995,95888231,"+",0,"NA","intron (NM_010325, intron 1 of 9)","intron (NM_010325, intron 1 of 9)",752,"NM_010325",14719,"Mm.230169","NM_010325","ENSMUSG00000031672","Got2","AL022787|FABP-pm|Got-2|mAspAT","glutamatic-oxaloacetic transaminase 2, mitochondrial","protein-coding"]
[4649,"chr2",109278180,109278417,"+",0,"NA","promoter-TSS (NM_029790)","promoter-TSS (NM_029790)",-8,"NM_029790",76894,"Mm.330451","NM_029790","ENSMUSG00000057234","Mettl15","0610027B03Rik|AI303697|AW049952|Mett5d1","methyltransferase like 15","protein-coding"]
[7123,"chr7",19663675,19666186,"+",0,"NA","promoter-TSS (NM_019649)","promoter-TSS (NM_019649)",100,"NM_019649",56457,"Mm.290960","NM_019649","ENSMUSG00000002981","Clptm1","HS9|N14","cleft lip and palate associated transmembrane protein 1","protein-coding"]
[170,"chr1",74661757,74662355,"+",0,"NA","intron (NM_001014974, intron 1 of 19)","CpG",302,"NM_001014974",67534,"Mm.260714","NM_001014974","ENSMUSG00000033257","Ttll4","4632407P03Rik|AI451681|mKIAA0173","tubulin tyrosine ligase-like family, member 4","protein-coding"]
[4873,"chr2",155825149,155827726,"+",0,"NA","5' UTR (NM_010579, exon 1 of 6)","5' UTR (NM_010579, exon 1 of 6)",488,"NM_010579",16418,"Mm.271674","NM_010579","ENSMUSG00000027613","Eif6","1110004P11|AA408895|CAB|Itgb4bp|eIF-6|imc-415|p27(BBP)|p27BBP","eukaryotic translation initiation factor 6","protein-coding"]
[5745,"chr4",120569531,120570761,"+",0,"NA","intron (NM_016748, intron 1 of 18)","CpG",130,"NM_016748",51797,"Mm.1815","NM_016748","ENSMUSG00000028633","Ctps","Ctps1","cytidine 5'-triphosphate synthase","protein-coding"]
[26,"chr1",20890629,20891029,"+",0,"NA","promoter-TSS (NR_040492)","promoter-TSS (NR_040492)",207,"NM_028829",74229,"Mm.40780","NM_028829","ENSMUSG00000025931","Paqr8","1700019B16Rik|3110001D06Rik","progestin and adipoQ receptor family member VIII","protein-coding"]
[6513,"chr5",137312749,137316006,"+",0,"NA","promoter-TSS (NM_011639)","promoter-TSS (NM_011639)",-136,"NM_011639",22051,"Mm.27063","NM_011639","ENSMUSG00000023348","Trip6","-","thyroid hormone receptor interactor 6","protein-coding"]
[2116,"chr13",46929047,46931015,"+",0,"NA","promoter-TSS (NM_010617)","promoter-TSS (NM_010617)",-313,"NM_010617",16553,"Mm.342703","NM_010617","ENSMUSG00000021375","Kif13a","4930505I07Rik|mKIAA4109","kinesin family member 13A","protein-coding"]
[7299,"chr7",45051248,45057224,"+",0,"NA","intron (NM_022999, intron 6 of 6)","intron (NM_022999, intron 6 of 6)",-1355,"NM_175022",233210,"Mm.219137","NM_175022","ENSMUSG00000046574","Prr12","6720469B10|BC058674","proline rich 12","protein-coding"]
[2250,"chr13",90089089,90090167,"+",0,"NA","promoter-TSS (NM_028012)","promoter-TSS (NM_028012)",-20,"NM_028012",108138,"Mm.37531","NM_028012","ENSMUSG00000021615","Xrcc4","2310057B22Rik|AW413319|AW545101","X-ray repair complementing defective repair in Chinese hamster cells 4","protein-coding"]
[526,"chr10",7779924,7781363,"+",0,"NA","intron (NM_145418, intron 1 of 7)","CpG",274,"NM_145418",215751,"Mm.471825","NM_145418","ENSMUSG00000040006","Ginm1","AA589616","glycoprotein integral membrane 1","protein-coding"]
[8298,"chr9",21760779,21761143,"+",0,"NA","promoter-TSS (NM_026282)","promoter-TSS (NM_026282)",-675,"NM_026282",67629,"Mm.295642","NM_026282","ENSMUSG00000074476","Spc24","2410030K01Rik|AV109292|Spbc24","SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)","protein-coding"]
[3500,"chr17",34305161,34306811,"+",0,"NA","exon (NM_010382, exon 1 of 6)","exon (NM_010382, exon 1 of 6)",119,"NM_010382",14969,"Mm.22564","NM_010382",null,"H2-Eb1","Eb|H-2Eb|H2Eb|Ia-4|Ia4","histocompatibility 2, class II antigen E beta","protein-coding"]
[6218,"chr5",72167534,72168514,"+",0,"NA","intron (NM_178599, intron 1 of 4)","CpG",159,"NM_178599",27784,"Mm.44223","NM_178599","ENSMUSG00000029213","Commd8","C77770|D5Buc26e","COMM domain containing 8","protein-coding"]
[8251,"chr9",14274734,14277052,"+",0,"NA","promoter-TSS (NM_030261)","promoter-TSS (NM_030261)",-408,"NM_030261",75747,"Mm.325126","NM_030261","ENSMUSG00000032009","Sesn3","5630400E15Rik|BC003348|SEST3","sestrin 3","protein-coding"]
[6568,"chr5",143180282,143180702,"+",0,"NA","promoter-TSS (NM_177880)","promoter-TSS (NM_177880)",283,"NM_021326",57782,"Mm.320419","NM_021326","ENSMUSG00000061898","Rbak","-","RB-associated KRAB zinc finger","protein-coding"]
[232,"chr1",92179012,92184362,"+",0,"NA","Intergenic","Intergenic",-1346,"NM_207225",208727,"Mm.318567","NM_207225","ENSMUSG00000026313","Hdac4","4932408F19Rik|HD4","histone deacetylase 4","protein-coding"]
[6997,"chr6",135189228,135190735,"+",0,"NA","intron (NR_040296, intron 2 of 4)","intron (NR_040296, intron 2 of 4)",1501,"NR_040296",100502888,"Mm.437844","NR_040296","ENSMUSG00000108239","Gm19434","-","predicted gene, 19434","ncRNA"]
[6207,"chr5",65536402,65538419,"+",0,"NA","5' UTR (NM_016786, exon 1 of 7)","5' UTR (NM_016786, exon 1 of 7)",165,"NM_001310619",53323,"Mm.319512","NM_016786","ENSMUSG00000029203","Ube2k","AW492011|D5Ertd601e|E2-25k|HIP-2|Hip2|Hypg|Lig","ubiquitin-conjugating enzyme E2K","protein-coding"]
[3458,"chr17",32091216,32091382,"+",0,"NA","non-coding (NR_027316, exon 1 of 9)","non-coding (NR_027316, exon 1 of 9)",124,"NR_027316",435518,"Mm.328944","NR_027316","ENSMUSG00000002791","Pdxk-ps","ENSMUSG00000002791|Gm9743","pyridoxal (pyridoxine, vitamin B6) kinase, pseudogene","pseudo"]
[3054,"chr16",17405266,17406711,"+",0,"NA","promoter-TSS (NM_023348)","promoter-TSS (NM_023348)",-12,"NM_023348",67474,"Mm.271992","NM_023348","ENSMUSG00000022765","Snap29","1300018G05Rik|AI891940|AU020222|BB131856|Gs32","synaptosomal-associated protein 29","protein-coding"]
[6008,"chr4",154158697,154161697,"+",0,"NA","exon (NM_026388, exon 2 of 4)","exon (NM_026388, exon 2 of 4)",487,"NM_026388",67808,"Mm.288737","NM_026388","ENSMUSG00000029030","Tprgl","1200015A19Rik|Svap30|Tprg1l|mover","transformation related protein 63 regulated like","protein-coding"]
[1182,"chr11",61577645,61579653,"+",0,"NA","intron (NM_001252188, intron 1 of 10)","MIR3|SINE|MIR",1038,"NM_010148",13855,"Mm.139695","NM_010148","ENSMUSG00000001036","Epn2","9530051D10Rik|AA536924|Ibp2","epsin 2","protein-coding"]
[7963,"chr8",77548971,77550141,"+",0,"NA","exon (NM_001081240, exon 1 of 12)","exon (NM_001081240, exon 1 of 12)",159,"NM_001081240",102182,"Mm.197630","NM_178903","ENSMUSG00000037134","Prmt10","AI931714|Prmt9","protein arginine methyltransferase 10 (putative)","protein-coding"]
[6744,"chr6",52203974,52204293,"+",0,"NA","exon (NM_010453, exon 1 of 2)","exon (NM_010453, exon 1 of 2)",454,"NM_010453",15402,"Mm.173","NM_010453","ENSMUSG00000038253","Hoxa5","Hox-1.3","homeobox A5","protein-coding"]
[1447,"chr11",97686227,97687204,"+",0,"NA","intron (NM_001085500, intron 2 of 2)","intron (NM_001085500, intron 2 of 2)",763,"NM_001085500",217149,"Mm.29659","NM_001085500","ENSMUSG00000078695","Cisd3","Mel-13|Mel13","CDGSH iron sulfur domain 3","protein-coding"]
[207,"chr1",86521837,86529965,"+",0,"NA","promoter-TSS (NM_008972)","promoter-TSS (NM_008972)",-835,"NM_008972",19231,"Mm.19187","NM_008972","ENSMUSG00000026238","Ptma","Thym","prothymosin alpha","protein-coding"]
[7595,"chr7",126861364,126862900,"+",0,"NA","promoter-TSS (NM_153580)","promoter-TSS (NM_153580)",160,"NM_172746",233876,"Mm.363427","NM_172746","ENSMUSG00000042606","Hirip3","B130036O03|C86302","HIRA interacting protein 3","protein-coding"]
[1510,"chr11",101278253,101278879,"+",0,"NA","promoter-TSS (NM_026562)","promoter-TSS (NM_026562)",382,"NM_026618",52469,"Mm.52","NM_026618","ENSMUSG00000017188","Coa3","1810033A19Rik|Ccdc56|D11Ertd99e|HSPC009","cytochrome C oxidase assembly factor 3","protein-coding"]
[48,"chr1",36444468,36445786,"+",0,"NA","exon (NM_001013374, exon 1 of 8)","exon (NM_001013374, exon 1 of 8)",144,"NM_001310517",214895,"Mm.287854","NM_001013374","ENSMUSG00000001143","Lman2l","A630028F14Rik|VIP36-like|VIPL","lectin, mannose-binding 2-like","protein-coding"]
[3641,"chr17",56324545,56327284,"+",0,"NA","promoter-TSS (NM_172132)","promoter-TSS (NM_172132)",-136,"NM_172132",193796,"Mm.45047","NM_172132","ENSMUSG00000024201","Kdm4b","4732474L06Rik|Jmjd2b|mKIAA0876","lysine (K)-specific demethylase 4B","protein-coding"]
[3585,"chr17",46202303,46204529,"+",0,"NA","promoter-TSS (NM_030715)","promoter-TSS (NM_030715)",561,"NM_028198",72322,"Mm.275039","NM_028198","ENSMUSG00000067150","Xpo5","2410004H11Rik|2700038C24Rik|AI648907|AW549301|Exp5|RanBp21|mKIAA1291","exportin 5","protein-coding"]
[8607,"chr9",104001863,104003267,"+",0,"NA","promoter-TSS (NM_028721)","promoter-TSS (NM_028721)",21,"NM_028721",74025,"Mm.479273","NM_028721","ENSMUSG00000032558","Nphp3","3632410F03Rik|AI550417|C230078J01|D330020E01Rik|pcy","nephronophthisis 3 (adolescent)","protein-coding"]
[1988,"chr12",112940264,112942432,"+",0,"NA","intron (NM_025399, intron 1 of 4)","intron (NM_025399, intron 1 of 4)",794,"NM_025399",66174,"Mm.7070","NM_025399","ENSMUSG00000002804","Nudt14","1110030M18Rik|UGPPase","nudix (nucleoside diphosphate linked moiety X)-type motif 14","protein-coding"]
[4128,"chr19",11911678,11913329,"+",0,"NA","5' UTR (NM_172635, exon 1 of 19)","5' UTR (NM_172635, exon 1 of 19)",104,"NM_172635",225929,"Mm.42711","NM_172635","ENSMUSG00000046139","Patl1","AV312086|Pat1b","protein associated with topoisomerase II homolog 1 (yeast)","protein-coding"]
[5981,"chr4",149546003,149548059,"+",0,"NA","intron (NM_001141930, intron 3 of 3)","intron (NM_001141930, intron 3 of 3)",1914,"NM_001141930",67087,"Mm.299735","NM_023465","ENSMUSG00000028988","Ctnnbip1","1110008O09Rik|2310001I19Rik|AW457332|Catnbip1|Icat","catenin beta interacting protein 1","protein-coding"]
[4376,"chr2",25262072,25264841,"+",0,"NA","exon (NM_175286, exon 1 of 4)","exon (NM_175286, exon 1 of 4)",858,"NM_175286",97031,"Mm.308539","NM_175286","ENSMUSG00000048707","Tprn","C430004E15Rik|C87750","taperin","protein-coding"]
[4243,"chr19",45045945,45049141,"+",0,"NA","promoter-TSS (NM_001178012)","promoter-TSS (NM_001178012)",-33,"NM_053197",94280,"Mm.36169","NM_053197","ENSMUSG00000025212","Sfxn3","-","sideroflexin 3","protein-coding"]
[2763,"chr15",75928810,75929721,"+",0,"NA","intron (NM_031201, intron 1 of 10)","intron (NM_031201, intron 1 of 10)",465,"NM_031201",22122,"Mm.22596","NM_031201","ENSMUSG00000022570","Tsta3","AI256181|FX|Tstap35b","tissue specific transplantation antigen P35B","protein-coding"]
[1141,"chr11",58307159,58308405,"+",0,"NA","intron (NM_182996, intron 2 of 11)","intron (NM_182996, intron 2 of 11)",713,"NM_001040686",103836,"Mm.41440","NM_182996","ENSMUSG00000037243","Zfp692","AI746306|AI839920|Zfp692-ps|Znf692","zinc finger protein 692","protein-coding"]
[984,"chr11",6273646,6275329,"+",0,"NA","exon (NM_134020, exon 2 of 5)","exon (NM_134020, exon 2 of 5)",350,"NM_134020",103694,"Mm.254495","NM_134020","ENSMUSG00000004394","Tmed4","1110014L17Rik|AI326346","transmembrane emp24 protein transport domain containing 4","protein-coding"]
[8011,"chr8",84968663,84970191,"+",0,"NA","promoter-TSS (NM_011563)","promoter-TSS (NM_011563)",-221,"NM_011563",21672,"Mm.347009","NM_011563",null,"Prdx2","AL022839|Band-8|NkefB|PRP|PrxII|TDX1|TPx|TPx-B|TR|TSA|Tdpx1|Torin","peroxiredoxin 2","protein-coding"]
[1155,"chr11",59471768,59472486,"+",0,"NA","intron (NM_178417, intron 1 of 3)","intron (NM_178417, intron 1 of 3)",347,"NM_178417",237775,"Mm.339604","NM_178417","ENSMUSG00000054519","Zfp867","-","zinc finger protein 867","protein-coding"]
[788,"chr10",81605644,81606675,"+",0,"NA","promoter-TSS (NR_030677)","promoter-TSS (NR_030677)",-149,"NR_030677",268319,"Mm.131825","NM_001033363","ENSMUSG00000074862","BC025920","-","zinc finger protein pseudogene","pseudo"]
[4797,"chr2",140668232,140671408,"+",0,"NA","intron (NM_001172160, intron 1 of 2)","intron (NM_001172160, intron 1 of 2)",1656,"NM_001172160",71436,"Mm.426781","NM_178382","ENSMUSG00000051379","Flrt3","5530600M07Rik|C430047I10Rik|mKIAA1469","fibronectin leucine rich transmembrane protein 3","protein-coding"]
[7530,"chr7",112678418,112680340,"+",0,"NA","promoter-TSS (NM_009346)","promoter-TSS (NM_009346)",59,"NM_009346",21676,"Mm.24685","NM_009346","ENSMUSG00000055320","Tead1","2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1","TEA domain family member 1","protein-coding"]
[5238,"chr3",95732703,95735293,"+",0,"NA","TTS (NM_001252653)","TTS (NM_001252653)",975,"NR_105981",102466787,null,"NR_105981","ENSMUSG00000098737","Mir7014","Gm27837|mmu-mir-7014","microRNA 7014","ncRNA"]
[6630,"chr6",6955533,6956423,"+",0,"NA","promoter-TSS (NM_001077713)","promoter-TSS (NM_001077713)",-40,"NM_001077713",71238,"Mm.389086","NM_001077713",null,"Sdhaf3","0610005M07Rik|4933430A16Rik|Acn9","succinate dehydrogenase complex assembly factor 3","protein-coding"]
[6335,"chr5",111330185,111331612,"+",0,"NA","intron (NM_001301643, intron 1 of 10)","CpG",201,"NM_001301666",56305,"Mm.200516","NM_019640","ENSMUSG00000050017","Pitpnb","PI-TP-beta","phosphatidylinositol transfer protein, beta","protein-coding"]
[4115,"chr19",9981566,9983703,"+",0,"NA","promoter-TSS (NM_010239)","promoter-TSS (NM_010239)",-12,"NM_010239",14319,"Mm.1776","NM_010239","ENSMUSG00000024661","Fth1","FHC|Fth|HFt|MFH","ferritin heavy polypeptide 1","protein-coding"]
[1313,"chr11",78164349,78166283,"+",0,"NA","TTS (NM_080849)","TTS (NM_080849)",234,"NM_009423",22032,"Mm.390418","NM_009423",null,"Traf4","A530032M13Rik|CART1|msp2","TNF receptor associated factor 4","protein-coding"]
[7891,"chr8",69774590,69774937,"+",0,"NA","intron (NM_177899, intron 1 of 3)","CpG",148,"NM_177899",330788,"Mm.41364","NM_177899",null,"Zfp866","9830167H18Rik|AI875089|C85843|D330038O06Rik","zinc finger protein 866","protein-coding"]
[1617,"chr11",115823325,115828359,"+",0,"NA","intron (NM_145438, intron 1 of 25)","B1_Mus1|SINE|Alu",1784,"NM_001252532",217325,"Mm.290450","NM_145438","ENSMUSG00000020782","Llgl2","9130006H11Rik|Llglh2","lethal giant larvae homolog 2 (Drosophila)","protein-coding"]
[8634,"chr9",107337657,107339064,"+",0,"NA","promoter-TSS (NM_133984)","promoter-TSS (NM_133984)",-10,"NM_133984",69536,"Mm.259467","NM_133984","ENSMUSG00000032579","Hemk1","2310008M14Rik|AW049265","HemK methyltransferase family member 1","protein-coding"]
[6048,"chr5",3647155,3648028,"+",0,"NA","exon (NM_026033, exon 1 of 5)","exon (NM_026033, exon 1 of 5)",345,"NM_026033",67210,"Mm.178424","NM_026033","ENSMUSG00000007415","Gatad1","2310031E19Rik|2810047M21Rik|8430439A17Rik|9130430G15Rik|B330017N08Rik|ENSMUSG00000073241|Odag","GATA zinc finger domain containing 1","protein-coding"]
[3521,"chr17",35089205,35089867,"+",0,"NA","intron (NM_178592, intron 1 of 19)","CpG",245,"NM_178592",193742,"Mm.43745","NM_178592","ENSMUSG00000007036","Abhd16a","AI326074|Bat-5|Bat5|D17H6S82E|NG26","abhydrolase domain containing 16A","protein-coding"]
[490,"chr1",190928067,190929714,"+",0,"NA","intron (NR_037579, intron 1 of 7)","CpG",385,"NR_037579",52477,"Mm.289914","NM_021421","ENSMUSG00000026634","Angel2","2610307I21Rik|5730410O10Rik|AI845692|D1Ertd396e|D1Ertd654e","angel homolog 2 (Drosophila)","protein-coding"]
[1843,"chr12",73907005,73909504,"+",0,"NA","5' UTR (NM_010431, exon 1 of 15)","5' UTR (NM_010431, exon 1 of 15)",387,"NM_001313919",15251,"Mm.3879","NM_010431","ENSMUSG00000021109","Hif1a","AA959795|HIF-1-alpha|HIF1-alpha|HIF1alpha|MOP1|bHLHe78","hypoxia inducible factor 1, alpha subunit","protein-coding"]
[1112,"chr11",52359630,52363780,"+",0,"NA","intron (NM_011694, intron 1 of 8)","CpG",843,"NM_011694",22333,"Mm.3555","NM_011694","ENSMUSG00000020402","Vdac1","AL033343|Vdac5|mVDAC1|mVDAC5","voltage-dependent anion channel 1","protein-coding"]
[6502,"chr5",136170171,136172823,"+",0,"NA","promoter-TSS (NM_178751)","promoter-TSS (NM_178751)",-841,"NM_178751",269717,"Mm.308396","NM_178751","ENSMUSG00000039747","Orai2","A730041O15Rik|Tmem142b","ORAI calcium release-activated calcium modulator 2","protein-coding"]
[1294,"chr11",76213584,76218250,"+",0,"NA","intron (NM_177367, intron 1 of 1)","B1_Mur1|SINE|Alu",1655,"NM_177367",276919,"Mm.482713","NM_177367","ENSMUSG00000049396","Gemin4","4932415L08Rik|AU015359","gem (nuclear organelle) associated protein 4","protein-coding"]
[461,"chr1",180935634,180937457,"+",0,"NA","intron (NM_010094, intron 1 of 3)","intron (NM_010094, intron 1 of 3)",1506,"NM_010094",13590,"Mm.378911","NM_010094","ENSMUSG00000038793","Lefty1","AI450052|Ebaf|Leftb|Stra3|Tgfb4|lefty|lefty-1","left right determination factor 1","protein-coding"]
[3451,"chr17",31295666,31297724,"+",0,"NA","5' UTR (NM_001242427, exon 1 of 20)","5' UTR (NM_001242427, exon 1 of 20)",471,"NM_001242427",224674,"Mm.311395","NM_153062","ENSMUSG00000024036","Slc37a1","G3PP","solute carrier family 37 (glycerol-3-phosphate transporter), member 1","protein-coding"]
[7894,"chr8",69821508,69824052,"+",0,"NA","TTS (NM_198101)","TTS (NM_198101)",215,"NM_020028",53978,"Mm.23253","NM_020028","ENSMUSG00000031861","Lpar2","Edg4|IPA2|LPA2","lysophosphatidic acid receptor 2","protein-coding"]
[7111,"chr7",19308235,19310918,"+",0,"NA","5' UTR (NM_008036, exon 1 of 4)","5' UTR (NM_008036, exon 1 of 4)",469,"NM_008036",14282,"Mm.248335","NM_008036","ENSMUSG00000003545","Fosb","-","FBJ osteosarcoma oncogene B","protein-coding"]
[6345,"chr5",113992826,113994048,"+",0,"NA","intron (NM_198109, intron 1 of 14)","CpG",320,"NM_198109",231637,"Mm.389682","NM_198109","ENSMUSG00000042121","Ssh1","AW551225|Gm1394|Gm1395|SSH-1|mSSH-1L","slingshot homolog 1 (Drosophila)","protein-coding"]
[4640,"chr2",104492018,104494977,"+",0,"NA","intron (NM_010434, intron 1 of 15)","CpG",992,"NM_010434",15259,"Mm.257925","NM_010434","ENSMUSG00000027177","Hipk3","DYRK6|FIST3|PKY|mir-1902","homeodomain interacting protein kinase 3","protein-coding"]
[1358,"chr11",84067253,84069364,"+",0,"NA","promoter-TSS (NM_019819)","promoter-TSS (NM_019819)",49,"NM_019819",56405,"Mm.240885","NM_019819","ENSMUSG00000018648","Dusp14","1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6","dual specificity phosphatase 14","protein-coding"]
[782,"chr10",81416690,81417790,"+",0,"NA","promoter-TSS (NR_106141)","promoter-TSS (NR_106141)",-943,"NR_106141",102465778,null,"NR_106141","ENSMUSG00000105379","Mir1191b","mmu-mir-1191b","microRNA 1191b","ncRNA"]
[5225,"chr3",95042017,95042556,"+",0,"NA","intron (NM_001282017, intron 1 of 9)","intron (NM_001282017, intron 1 of 9)",328,"NM_001282017",19185,"Mm.2261","NM_008951","ENSMUSG00000005625","Psmd4","Af1|Mcb1|angiocidin","proteasome (prosome, macropain) 26S subunit, non-ATPase, 4","protein-coding"]
[8701,"chr9",114400717,114402346,"+",0,"NA","intron (NR_108101, intron 1 of 14)","CpG",436,"NM_001200002",100504715,"Mm.290516","NM_001200002","ENSMUSG00000079260","Tmppe","-","transmembrane protein with metallophosphoesterase domain","protein-coding"]
[6510,"chr5",137287805,137291197,"+",0,"NA","intron (NM_009599, intron 1 of 4)","intron (NM_009599, intron 1 of 4)",1247,"NM_001290010",11423,"Mm.255464","NM_009599","ENSMUSG00000023328","Ache","-","acetylcholinesterase","protein-coding"]
[3607,"chr17",47368960,47369437,"+",0,"NA","promoter-TSS (NM_183086)","promoter-TSS (NM_183086)",1,"NM_183086",64657,"Mm.216250","NM_183086","ENSMUSG00000034729","Mrps10","1110038B19Rik|AW743084|Rpms10","mitochondrial ribosomal protein S10","protein-coding"]
[3648,"chr17",56626390,56627987,"+",0,"NA","promoter-TSS (NM_028782)","promoter-TSS (NM_028782)",-285,"NM_028782",74142,"Mm.329136","NM_028782","ENSMUSG00000041168","Lonp1","1200017E13Rik|LON|Prss15","lon peptidase 1, mitochondrial","protein-coding"]
[781,"chr10",81376689,81379786,"+",0,"NA","intron (NM_019757, intron 1 of 13)","CpG",133,"NM_019757",56371,"Mm.24202","NM_019757",null,"Fzr1","AW108046|Cdh1|FZR|FZR2|Fyr|HCDH|HCDH1","fizzy/cell division cycle 20 related 1 (Drosophila)","protein-coding"]
[8029,"chr8",86881961,86885250,"+",0,"NA","intron (NM_030563, intron 1 of 6)","B2_Mm2|SINE|B2",1653,"NM_030563",80750,"Mm.25117","NM_030563","ENSMUSG00000031652","N4bp1","AI481586|C81621","NEDD4 binding protein 1","protein-coding"]
[3015,"chr16",10990664,10993610,"+",0,"NA","intron (NM_019980, intron 1 of 3)","ID_B1|SINE|B4",984,"NM_019980",56722,"Mm.294753","NM_019980","ENSMUSG00000022500","Litaf","3222402J11Rik|C85531|N4WBP3|TBX1","LPS-induced TN factor","protein-coding"]
[1950,"chr12",104261501,104264995,"+",0,"NA","intron (NM_001199940, intron 1 of 5)","intron (NM_001199940, intron 1 of 5)",126,"NM_001199940",628900,"Mm.436602","NM_001199940","ENSMUSG00000079014","Serpina3i","2B2|EG628900|Gm6930","serine (or cysteine) peptidase inhibitor, clade A, member 3I","protein-coding"]
[6987,"chr6",133105009,133105951,"+",0,"NA","exon (NM_001271582, exon 1 of 2)","exon (NM_001271582, exon 1 of 2)",241,"NR_073368",381820,"Mm.291762","NM_001163445","ENSMUSG00000072704","Smim10l1","2700089E24Rik|AI662692","small integral membrane protein 10 like 1","protein-coding"]
[5748,"chr4",120924492,120925455,"+",0,"NA","promoter-TSS (NM_028457)","promoter-TSS (NM_028457)",32,"NM_028457",73172,"Mm.151436","NM_028457","ENSMUSG00000028629","Exo5","3110037I16Rik|AV297100|Dem1|Exo V|mExo5","exonuclease 5","protein-coding"]
[5578,"chr4",62407529,62410188,"+",0,"NA","promoter-TSS (NM_027297)","promoter-TSS (NM_027297)",75,"NM_027297",70052,"Mm.30660","NM_027297","ENSMUSG00000066148","Prpf4","1600015H11Rik|AI874830|AW047464|bN189G18.1","PRP4 pre-mRNA processing factor 4 homolog (yeast)","protein-coding"]
[5327,"chr3",116423806,116425284,"+",0,"NA","promoter-TSS (NM_001080818)","promoter-TSS (NM_001080818)",-513,"NM_001173553",229776,"Mm.17647","NM_001080818","ENSMUSG00000033502","Cdc14a","A830059A17Rik|CDC14A2|CDC14a1|Cdc14","CDC14 cell division cycle 14A","protein-coding"]
[8268,"chr9",20518235,20522435,"+",0,"NA","intron (NM_001082485, intron 2 of 8)","ID4|SINE|ID",1084,"NM_001135019",77519,"Mm.431849","NM_001082485","ENSMUSG00000060510","Zfp266","5330440G10Rik|5730601F06Rik|AW552317","zinc finger protein 266","protein-coding"]
[8486,"chr9",65345745,65348527,"+",0,"NA","intron (NM_016688, intron 1 of 4)","intron (NM_016688, intron 1 of 4)",1068,"NM_016688",50996,"Mm.29193","NM_016688","ENSMUSG00000041837","Pdcd7","C80112|ES18","programmed cell death 7","protein-coding"]
[1890,"chr12",84009053,84009265,"+",0,"NA","promoter-TSS (NM_012006)","promoter-TSS (NM_012006)",-343,"NM_012006",26897,"Mm.1978","NM_012006","ENSMUSG00000072949","Acot1","ACH2|CTE-1|CTE-I|Cte1|D12Ucla1","acyl-CoA thioesterase 1","protein-coding"]
[8723,"chr9",120492327,120493267,"+",0,"NA","5' UTR (NM_026892, exon 1 of 4)","5' UTR (NM_026892, exon 1 of 4)",191,"NM_026892",68969,"Mm.28753","NM_026892","ENSMUSG00000006941","Eif1b","1500010M16Rik|3110001N14Rik|Gc20","eukaryotic translation initiation factor 1B","protein-coding"]
[6281,"chr5",100426519,100430630,"+",0,"NA","intron (NR_034038, intron 2 of 4)","intron (NR_034038, intron 2 of 4)",961,"NR_034038",100503199,"Mm.392282","NR_034038","ENSMUSG00000097772","5430416N02Rik","100041797|Adapt33|Gm3514","RIKEN cDNA 5430416N02 gene","ncRNA"]
[872,"chr10",117746545,117746740,"+",0,"NA","promoter-TSS (NM_029875)","promoter-TSS (NM_029875)",-284,"NM_029875",215436,"Mm.256753","NM_029875","ENSMUSG00000060181","Slc35e3","9330166G04Rik|AI481200","solute carrier family 35, member E3","protein-coding"]
[8801,"chrX",21714646,21714799,"+",0,"NA","promoter-TSS (NM_020049)","promoter-TSS (NM_020049)",-178,"NM_020049",56774,"Mm.253984","NM_020049","ENSMUSG00000031089","Slc6a14","1110007A17Rik|9030613J17Rik|ATB0plus|CATB0plus","solute carrier family 6 (neurotransmitter transporter), member 14","protein-coding"]
[1146,"chr11",58954365,58955677,"+",0,"NA","promoter-TSS (NM_206882)","promoter-TSS (NM_206882)",336,"NM_178218",319162,"Mm.212549","NM_178218",null,"Hist3h2a","-","histone cluster 3, H2a","protein-coding"]
[89,"chr1",52118442,52119949,"+",0,"NA","promoter-TSS (NM_001205313)","promoter-TSS (NM_001205313)",-243,"NM_009283",20846,"Mm.277406","NM_009283","ENSMUSG00000026104","Stat1","2010005J02Rik|AA408197","signal transducer and activator of transcription 1","protein-coding"]
[8058,"chr8",94857579,94858006,"+",0,"NA","exon (NM_009090, exon 2 of 9)","exon (NM_009090, exon 2 of 9)",342,"NM_009090",20021,"Mm.292492","NM_009090","ENSMUSG00000031783","Polr2c","33kDa|RPB3|Rpo2-3|mRBP31","polymerase (RNA) II (DNA directed) polypeptide C","protein-coding"]
[988,"chr11",6443290,6445053,"+",0,"NA","intron (NM_029938, intron 1 of 4)","CpG",272,"NM_029938",77605,"Mm.27624","NM_029938","ENSMUSG00000041126","H2afv","C530002L11Rik|H2a.z-2|H2av","H2A histone family, member V","protein-coding"]
[4342,"chr2",17730004,17731561,"+",0,"NA","intron (NM_028757, intron 1 of 6)","intron (NM_028757, intron 1 of 6)",286,"NM_028757",74103,"Mm.120298","NM_028757","ENSMUSG00000053702","Nebl","1200007O21Rik|A630080F05Rik|BB140644|D830029A09Rik|Lnebl","nebulette","protein-coding"]
[1454,"chr11",97883482,97884718,"+",0,"NA","promoter-TSS (NM_001081435)","promoter-TSS (NM_001081435)",54,"NM_001081435",72973,"Mm.245939","NM_001081435",null,"Fbxo47","2900052P03Rik|Gm1562","F-box protein 47","protein-coding"]
[8528,"chr9",74975427,74976829,"+",0,"NA","promoter-TSS (NM_153584)","promoter-TSS (NM_153584)",17,"NM_153584",235493,"Mm.208955","NM_153584","ENSMUSG00000034858","Fam214a","6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370","family with sequence similarity 214, member A","protein-coding"]
[6969,"chr6",125313209,125314677,"+",0,"NA","promoter-TSS (NM_010736)","promoter-TSS (NM_010736)",-73,"NM_010736",17000,"Mm.3122","NM_010736","ENSMUSG00000030339","Ltbr","AI256028|CD18|LTbetaR|Ltar|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFRrp|Tnfbr|Tnfrsf3","lymphotoxin B receptor","protein-coding"]
[8661,"chr9",108459024,108461498,"+",0,"NA","promoter-TSS (NM_133744)","promoter-TSS (NM_133744)",-257,"NM_133744",72454,"Mm.46488","NM_133744","ENSMUSG00000049305","Ccdc71","2600016J21Rik","coiled-coil domain containing 71","protein-coding"]
[3960,"chr18",77938074,77939174,"+",0,"NA","intron (NM_001195633, intron 1 of 43)","CpG",157,"NM_001195633",100502841,"Mm.297782","NM_001195633","ENSMUSG00000039840","Epg5","4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632","ectopic P-granules autophagy protein 5 homolog (C. elegans)","protein-coding"]
[7717,"chr7",143548063,143549716,"+",0,"NA","promoter-TSS (NM_001285490)","promoter-TSS (NM_001285490)",-61,"NM_001285490",17955,"Mm.294625","NM_008672","ENSMUSG00000059119","Nap1l4","2810410H14Rik|AI316776|D7Wsu30e|Nap2","nucleosome assembly protein 1-like 4","protein-coding"]
[5117,"chr3",81037250,81037447,"+",0,"NA","5' UTR (NM_019971, exon 1 of 6)","5' UTR (NM_019971, exon 1 of 6)",932,"NM_019971",54635,"Mm.331089","NM_019971","ENSMUSG00000028019","Pdgfc","1110064L01Rik|AI647969|PDGF-C","platelet-derived growth factor, C polypeptide","protein-coding"]
[1584,"chr11",109439784,109440447,"+",0,"NA","promoter-TSS (NR_040680)","promoter-TSS (NR_040680)",37,"NR_040680",100503496,"Mm.265874","NR_040680",null,"LOC100503496","-","uncharacterized LOC100503496","ncRNA"]
[7174,"chr7",27472459,27475471,"+",0,"NA","intron (NM_133210, intron 1 of 1)","intron (NM_133210, intron 1 of 1)",125,"NM_133210",170742,"Mm.200120","NM_133210","ENSMUSG00000055200","Sertad3","AW124805|D1Mgi51|Rbt1|Sei3","SERTA domain containing 3","protein-coding"]
[1675,"chr11",120484314,120485052,"+",0,"NA","promoter-TSS (NM_027204)","promoter-TSS (NM_027204)",14,"NM_027204",56282,"Mm.133851","NM_027204",null,"Mrpl12","0610034O11Rik|1500031N16Rik|MRP-L12|Rpml12","mitochondrial ribosomal protein L12","protein-coding"]
[649,"chr10",60001316,60001566,"+",0,"NA","intron (NM_025514, intron 1 of 3)","intron (NM_025514, intron 1 of 3)",-1364,"NM_026937",69090,"Mm.155839","NM_026937","ENSMUSG00000044475","Ascc1","1810015P09Rik|AI550520|ASC1p50|CGI-18","activating signal cointegrator 1 complex subunit 1","protein-coding"]
[7219,"chr7",30089850,30090228,"+",0,"NA","intron (NM_152814, intron 1 of 3)","intron (NM_152814, intron 1 of 3)",471,"NM_152814",72556,"Mm.441512","NM_152814","ENSMUSG00000078768","Zfp566","2700043M03Rik|mszf4","zinc finger protein 566","protein-coding"]
[5527,"chr4",45011319,45013597,"+",0,"NA","promoter-TSS (NM_001163284)","promoter-TSS (NM_001163284)",-46,"NM_173399",230119,"Mm.44222","NM_173399","ENSMUSG00000049657","Zbtb5","5930421I10|9430083K24Rik|AI646847|mKIAA0354","zinc finger and BTB domain containing 5","protein-coding"]
[8793,"chrX",20547857,20548448,"+",0,"NA","Intergenic","Intergenic",-1666,"NM_009060",19733,"Mm.2118","NM_009060","ENSMUSG00000023070","Rgn","AI265316|GNL|SMP30","regucalcin","protein-coding"]
[3903,"chr18",61176400,61178109,"+",0,"NA","promoter-TSS (NM_134134)","promoter-TSS (NM_134134)",-204,"NM_134134",106894,"Mm.22574","NM_134134","ENSMUSG00000024622","Hmgxb3","2510002C16Rik|A630042L21Rik|AI413166|mKIAA0194","HMG box domain containing 3","protein-coding"]
[2150,"chr13",54589662,54591344,"+",0,"NA","promoter-TSS (NM_178605)","promoter-TSS (NM_178605)",272,"NM_025933",67044,"Mm.29353","NM_025933","ENSMUSG00000025868","Higd2a","2010110M21Rik|AA690237","HIG1 domain family, member 2A","protein-coding"]
[1318,"chr11",78244918,78248235,"+",0,"NA","promoter-TSS (NM_009297)","promoter-TSS (NM_009297)",830,"NM_009143",20316,"Mm.20755","NM_009143","ENSMUSG00000002064","Sdf2","AI853825","stromal cell derived factor 2","protein-coding"]
[642,"chr10",58446138,58447760,"+",0,"NA","promoter-TSS (NM_011240)","promoter-TSS (NM_011240)",97,"NM_011240",19386,"Mm.431695","NM_011240","ENSMUSG00000003226","Ranbp2","A430087B05Rik|AI256741|NUP358","RAN binding protein 2","protein-coding"]
[8704,"chr9",114727753,114732278,"+",0,"NA","Intergenic","B4|SINE|B4",-1188,"NM_026036",67213,"Mm.28858","NM_026036","ENSMUSG00000032434","Cmtm6","2810051A14Rik|AA536733|Cklfsf6","CKLF-like MARVEL transmembrane domain containing 6","protein-coding"]
[8191,"chr8",121829050,121830227,"+",0,"NA","promoter-TSS (NM_145605)","promoter-TSS (NM_145605)",-69,"NM_145605",234825,"Mm.209329","NM_145605","ENSMUSG00000040263","Klhdc4","AA408426|AV352552|BC012312|G430025P05Rik","kelch domain containing 4","protein-coding"]
[1764,"chr12",33302052,33304105,"+",0,"NA","intron (NM_001033436, intron 1 of 7)","intron (NM_001033436, intron 1 of 7)",563,"NM_001033436",380753,"Mm.41540","NM_028139","ENSMUSG00000020564","Atxn7l1","2810423G08Rik|Atxn7l4","ataxin 7-like 1","protein-coding"]
[6290,"chr5",103628835,103630202,"+",0,"NA","promoter-TSS (NM_029415)","promoter-TSS (NM_029415)",-115,"NM_029415",75750,"Mm.7446","NM_029415","ENSMUSG00000029321","Slc10a6","8430417G17Rik|C78479|Soat","solute carrier family 10 (sodium/bile acid cotransporter family), member 6","protein-coding"]
[8847,"chrX",71816129,71817209,"+",0,"NA","promoter-TSS (NM_001081356)","promoter-TSS (NM_001081356)",-89,"NM_001081356",67048,"Mm.41102","NM_001081356","ENSMUSG00000073131","Vma21","2610030H06Rik|AI840175","VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)","protein-coding"]
[4849,"chr2",153344739,153348011,"+",0,"NA","promoter-TSS (NR_040318)","promoter-TSS (NR_040318)",236,"NM_001039939",228790,"Mm.330677","NM_001039939","ENSMUSG00000042548","Asxl1","mKIAA0978","additional sex combs like 1","protein-coding"]
[8668,"chr9",108578328,108579036,"+",0,"NA","promoter-TSS (NM_031392)","promoter-TSS (NM_031392)",-12,"NM_031392",83669,"Mm.335454","NM_031392","ENSMUSG00000066357","Wdr6","mWDR6","WD repeat domain 6","protein-coding"]
[5592,"chr4",74251168,74252914,"+",0,"NA","5' UTR (NM_144787, exon 1 of 22)","5' UTR (NM_144787, exon 1 of 22)",162,"NM_144787",76804,"Mm.209059","NM_144787","ENSMUSG00000028397","Kdm4c","2410141F18Rik|AA517467|Gasc1|Jmjd2c","lysine (K)-specific demethylase 4C","protein-coding"]
[184,"chr1",75435978,75436289,"+",0,"NA","intron (NM_133708, intron 1 of 12)","intron (NM_133708, intron 1 of 12)",190,"NM_133708",69080,"Mm.23951","NM_133708","ENSMUSG00000033021","Gmppa","1810012N01Rik","GDP-mannose pyrophosphorylase A","protein-coding"]
[776,"chr10",81266248,81268784,"+",0,"NA","promoter-TSS (NM_018758)","promoter-TSS (NM_018758)",-590,"NM_025317",66047,"Mm.43397","NM_025317","ENSMUSG00000034932","Mrpl54","0610008M19Rik|D10Sut1e","mitochondrial ribosomal protein L54","protein-coding"]
[3738,"chr17",87443247,87447635,"+",0,"NA","intron (NM_007589, intron 1 of 5)","intron (NM_007589, intron 1 of 5)",1494,"NM_007589",12314,"Mm.329243","NM_007589","ENSMUSG00000036438","Calm2","1500001E21Rik|AL024017","calmodulin 2","protein-coding"]
[1570,"chr11",106786526,106789836,"+",0,"NA","intron (NM_007840, intron 1 of 12)","CpG",313,"NM_007840",13207,"Mm.491096","NM_007840","ENSMUSG00000020719","Ddx5","2600009A06Rik|G17P1|HUMP68|Hlr1|p68","DEAD (Asp-Glu-Ala-Asp) box polypeptide 5","protein-coding"]
[6381,"chr5",117976877,117977051,"+",0,"NA","exon (NM_145564, exon 1 of 12)","exon (NM_145564, exon 1 of 12)",194,"NM_145564",231670,"Mm.21912","NM_145564","ENSMUSG00000032898","Fbxo21","2810425J22Rik|AU016673|mKIAA0875","F-box protein 21","protein-coding"]
[2673,"chr15",31223838,31225347,"+",0,"NA","intron (NM_146057, intron 1 of 3)","CpG",207,"NM_146057",223453,"Mm.222867","NM_146057","ENSMUSG00000039168","Dap","4921531N22Rik|AI789753|AU040360","death-associated protein","protein-coding"]
[5625,"chr4",98923741,98924539,"+",0,"NA","5' UTR (NM_146144, exon 1 of 9)","5' UTR (NM_146144, exon 1 of 9)",330,"NM_146144",230484,"Mm.371692","NM_146144","ENSMUSG00000028560","Usp1","-","ubiquitin specific peptidase 1","protein-coding"]
[181,"chr1",75229819,75233293,"+",0,"NA","intron (NM_001243090, intron 1 of 2)","intron (NM_001243090, intron 1 of 2)",537,"NM_001243090",381272,"Mm.239588","NM_001243090","ENSMUSG00000096094","A630095N17Rik","Gm1624","RIKEN cDNA A630095N17 gene","protein-coding"]
[412,"chr1",171246771,171248014,"+",0,"NA","promoter-TSS (NM_153064)","promoter-TSS (NM_153064)",-270,"NM_153064",226646,"Mm.21669","NM_153064","ENSMUSG00000013593","Ndufs2","CI-49kD","NADH dehydrogenase (ubiquinone) Fe-S protein 2","protein-coding"]
[6239,"chr5",76529356,76530025,"+",0,"NA","intron (NM_001289770, intron 1 of 18)","intron (NM_001289770, intron 1 of 18)",379,"NM_001289770",69940,"Mm.403233","NM_027270","ENSMUSG00000036435","Exoc1","2810407P21Rik|A730011E05Rik|SEC3|Sec3l1|Sec3p","exocyst complex component 1","protein-coding"]
[8642,"chr9",107587189,107589119,"+",0,"NA","TTS (NM_178020)","TTS (NM_178020)",436,"NM_025903",15983,"Mm.215335","NM_025903","ENSMUSG00000010048","Ifrd2","1810034A24Rik|AA470234|AI838527|SKMc15","interferon-related developmental regulator 2","protein-coding"]
[4933,"chr2",165325855,165327100,"+",0,"NA","promoter-TSS (NM_207706)","promoter-TSS (NM_207706)",2,"NM_080287",140579,"Mm.35064","NM_080287","ENSMUSG00000017670","Elmo2","1190002F24Rik|CED-12","engulfment and cell motility 2","protein-coding"]
[3721,"chr17",81064563,81065012,"+",0,"NA","intron (NM_028138, intron 1 of 9)","intron (NM_028138, intron 1 of 9)",298,"NM_028138",72167,"Mm.273257","NM_028138","ENSMUSG00000024246","Thumpd2","2810025A12Rik","THUMP domain containing 2","protein-coding"]
[2893,"chr15",89195803,89197245,"+",0,"NA","promoter-TSS (NM_027081)","promoter-TSS (NM_027081)",-50,"NM_027081",69440,"Mm.482128","NM_027081","ENSMUSG00000015377","Dennd6b","1700027J05Rik|AI414881|Fam116b","DENN/MADD domain containing 6B","protein-coding"]
[2062,"chr13",30544525,30545839,"+",0,"NA","exon (NM_025710, exon 1 of 2)","exon (NM_025710, exon 1 of 2)",134,"NM_025710",66694,"Mm.181933","NM_025710","ENSMUSG00000038462","Uqcrfs1","4430402G14Rik|AI875505","ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1","protein-coding"]
[5204,"chr3",90725362,90726056,"+",0,"NA","Intergenic","Intergenic",-1197,"NM_001165968",384997,"Mm.316644","NM_207263","ENSMUSG00000042250","Pglyrp4","Gm1478|Gm413","peptidoglycan recognition protein 4","protein-coding"]
[3935,"chr18",68299543,68300947,"+",0,"NA","promoter-TSS (NM_153794)","promoter-TSS (NM_153794)",88,"NM_153794",108654,"Mm.125857","NM_153794","ENSMUSG00000038121","Fam210a","4933403F05Rik|AA987140|AV134576|AW491926","family with sequence similarity 210, member A","protein-coding"]
[326,"chr1",136624361,136625352,"+",0,"NA","promoter-TSS (NM_177643)","promoter-TSS (NM_177643)",-45,"NM_177643",226442,"Mm.62521","NM_177643","ENSMUSG00000041483","Zfp281","Znf281","zinc finger protein 281","protein-coding"]
[7740,"chr8",4166628,4167268,"+",0,"NA","intron (NM_001039578, intron 1 of 10)","CpG",381,"NM_001039578",213027,"Mm.437106","NM_153536","ENSMUSG00000011832","Evi5l","1700084G18Rik|2310039H16Rik|3110007G05Rik|B130050I23Rik","ecotropic viral integration site 5 like","protein-coding"]
[6989,"chr6",134566295,134567596,"+",0,"NA","promoter-TSS (NM_008514)","promoter-TSS (NM_008514)",-32,"NM_008514",16974,"Mm.321990","NM_008514","ENSMUSG00000030201","Lrp6","C030016K15Rik|Cd|Gw|ska26|ska<m26Jus>|skax26","low density lipoprotein receptor-related protein 6","protein-coding"]
[2886,"chr15",88818848,88820315,"+",0,"NA","promoter-TSS (NM_001142357)","promoter-TSS (NM_001142357)",-65,"NM_029720",76737,"Mm.292567","NM_029720","ENSMUSG00000023272","Creld2","5730592L21Rik|C85758","cysteine-rich with EGF-like domains 2","protein-coding"]
[2543,"chr14",65592712,65593339,"+",0,"NA","promoter-TSS (NR_045599)","promoter-TSS (NR_045599)",87,"NM_001253812",74195,"Mm.29719","NM_028811","ENSMUSG00000022031","Elp3","2610507P14Rik|KAT9","elongator acetyltransferase complex subunit 3","protein-coding"]
[8892,"chrX",97375564,97377023,"+",0,"NA","intron (NM_001161432, intron 1 of 7)","intron (NM_001161432, intron 1 of 7)",916,"NM_001161432",245527,"Mm.189270","NM_175540","ENSMUSG00000034457","Eda2r","9430060M22Rik|TNFRSF27|Xedar","ectodysplasin A2 receptor","protein-coding"]
[5650,"chr4",107177646,107179769,"+",0,"NA","promoter-TSS (NM_029565)","promoter-TSS (NM_029565)",77,"NM_029565",56374,"Mm.291192","NM_029565","ENSMUSG00000028618","Tmem59","1110001M20Rik|3110046P06Rik|AI256529|D4Ertd20e|MTDCF1|ORF18","transmembrane protein 59","protein-coding"]
[5224,"chr3",94974178,94975723,"+",0,"NA","5' UTR (NM_175356, exon 1 of 11)","5' UTR (NM_175356, exon 1 of 11)",219,"NM_001293716",107650,"Mm.217222","NM_175356","ENSMUSG00000038861","Pi4kb","ESTM41|PI4K-beta|PI4Kbeta|Pik4cb","phosphatidylinositol 4-kinase, catalytic, beta polypeptide","protein-coding"]
[5129,"chr3",84951222,84953486,"+",0,"NA","5' UTR (NM_080428, exon 1 of 11)","5' UTR (NM_080428, exon 1 of 11)",143,"NM_080428",50754,"Mm.196475","NM_080428","ENSMUSG00000028086","Fbxw7","1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10","F-box and WD-40 domain protein 7","protein-coding"]
[6660,"chr6",29272325,29272977,"+",0,"NA","promoter-TSS (NM_023516)","promoter-TSS (NM_023516)",25,"NM_023516",69573,"Mm.45161","NM_023516","ENSMUSG00000043421","Hilpda","2310016C08Rik|AW049004|Hig2","hypoxia inducible lipid droplet associated","protein-coding"]
[7212,"chr7",29766772,29769174,"+",0,"NA","promoter-TSS (NM_023750)","promoter-TSS (NM_023750)",-579,"NM_023750",74352,"Mm.251083","NM_023750",null,"Zfp84","2210410P13Rik|4633401C23Rik|AI415447|BB081605|C86188|KRAB18|Zfp69","zinc finger protein 84","protein-coding"]
[7189,"chr7",28277782,28277985,"+",0,"NA","exon (NM_001177427, exon 1 of 1)","exon (NM_001177427, exon 1 of 1)",177,"NM_001177427",434156,"Mm.118535","NM_001177427","ENSMUSG00000070705","Eid2b","3010005C08Rik","EP300 interacting inhibitor of differentiation 2B","protein-coding"]
[4681,"chr2",118760576,118765353,"+",0,"NA","promoter-TSS (NM_001001982)","promoter-TSS (NM_001001982)",-303,"NM_001001982",214239,"Mm.379342","NM_001001982","ENSMUSG00000045838","A430105I19Rik","Gm353","RIKEN cDNA A430105I19 gene","protein-coding"]
[4287,"chr19",56397210,56397890,"+",0,"NA","intron (NM_007611, intron 1 of 6)","intron (NM_007611, intron 1 of 6)",421,"NM_007611",12369,"Mm.35687","NM_007611","ENSMUSG00000025076","Casp7","AI314680|CMH-1|ICE-IAP3|Mch3|caspase-7|mCASP-7","caspase 7","protein-coding"]
[2791,"chr15",76694263,76698993,"+",0,"NA","promoter-TSS (NM_182805)","promoter-TSS (NM_182805)",-136,"NM_182805",76282,"Mm.30130","NM_182805","ENSMUSG00000022546","Gpt","1300007J06Rik|2310022B03Rik|ALT|Gpt-1|Gpt1","glutamic pyruvic transaminase, soluble","protein-coding"]
[8076,"chr8",104395085,104396337,"+",0,"NA","promoter-TSS (NM_153582)","promoter-TSS (NM_153582)",96,"NM_153582",97487,"Mm.29658","NM_153582","ENSMUSG00000096188","Cmtm4","Cklfsf4|D19397|ENSMUSG00000051554|Gm9853","CKLF-like MARVEL transmembrane domain containing 4","protein-coding"]
[5362,"chr3",131271158,131272408,"+",0,"NA","intron (NM_008212, intron 1 of 7)","CpG",318,"NM_008212",15107,"Mm.260164","NM_008212","ENSMUSG00000027984","Hadh","AA409008|AU019341|AW742602|HCDH|Hadhsc|Schad","hydroxyacyl-Coenzyme A dehydrogenase","protein-coding"]
[4481,"chr2",34799486,34800591,"+",0,"NA","promoter-TSS (NM_145522)","promoter-TSS (NM_145522)",-126,"NM_145522",227746,"Mm.158705","NM_145522","ENSMUSG00000070953","Rabepk","8430412M01Rik|9530020D24Rik|AV073337|C87311|Rab9p40","Rab9 effector protein with kelch motifs","protein-coding"]
[1867,"chr12",80132014,80132937,"+",0,"NA","intron (NR_033514, intron 1 of 2)","CpG",369,"NR_033514",69548,"Mm.269712","NR_033514","ENSMUSG00000097729","2310015A10Rik","5330419I17Rik","RIKEN cDNA 2310015A10 gene","ncRNA"]
[4742,"chr2",127133755,127134335,"+",0,"NA","promoter-TSS (NM_144818)","promoter-TSS (NM_144818)",-91,"NM_144818",215387,"Mm.29786","NM_144818","ENSMUSG00000034906","Ncaph","A730011O11Rik|Brrn1|HCAP-H|mKIAA0074","non-SMC condensin I complex, subunit H","protein-coding"]
[3969,"chr18",82474637,82476388,"+",0,"NA","intron (NM_010777, intron 1 of 6)","intron (NM_010777, intron 1 of 6)",389,"NM_001025245",17196,"Mm.252063","NM_010777","ENSMUSG00000041607","Mbp","C76307|Hmbpr|R75289|golli-mbp|mld|shi","myelin basic protein","protein-coding"]
[4664,"chr2",113847922,113849393,"+",0,"NA","promoter-TSS (NM_181416)","promoter-TSS (NM_181416)",4,"NM_181416",228482,"Mm.45753","NM_181416","ENSMUSG00000041219","Arhgap11a","6530401L14Rik|mKIAA0013","Rho GTPase activating protein 11A","protein-coding"]
[7957,"chr8",74993667,74994409,"+",0,"NA","intron (NM_178017, intron 1 of 10)","CpG",388,"NM_178017",70823,"Mm.261739","NM_178017","ENSMUSG00000034518","Hmgxb4","4733401K04Rik|AI316803|Hmgb2l1","HMG box domain containing 4","protein-coding"]
[2505,"chr14",56810867,56811347,"+",0,"NA","intron (NM_144842, intron 1 of 7)","CpG",357,"NM_001253753",219105,"Mm.473172","NM_144842","ENSMUSG00000040123","Zmym5","9830124H08Rik","zinc finger, MYM-type 5","protein-coding"]
[8441,"chr9",57588494,57589960,"+",0,"NA","promoter-TSS (NM_027895)","promoter-TSS (NM_027895)",-225,"NM_027895",71742,"Mm.155877","NM_027895","ENSMUSG00000032308","Ulk3","1200015E14Rik","unc-51-like kinase 3","protein-coding"]
[2936,"chr15",99125942,99127095,"+",0,"NA","promoter-TSS (NM_139140)","promoter-TSS (NM_139140)",-327,"NM_139140",72572,"Mm.276650","NM_139140","ENSMUSG00000051934","Spats2","2700012F11Rik|59kDa|Scr59|p59","spermatogenesis associated, serine-rich 2","protein-coding"]
[8364,"chr9",44603671,44606032,"+",0,"NA","promoter-TSS (NM_007841)","promoter-TSS (NM_007841)",-41,"NM_001110826",13209,"Mm.267061","NM_007841","ENSMUSG00000032097","Ddx6","1110001P04Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck","DEAD (Asp-Glu-Ala-Asp) box polypeptide 6","protein-coding"]
[1289,"chr11",75650256,75657672,"+",0,"NA","intron (NM_001080774, intron 1 of 31)","intron (NM_001080774, intron 1 of 31)",1814,"NM_001080774",17913,"Mm.234502","NM_008659","ENSMUSG00000017774","Myo1c","C80397|MMIb|MYO1E|NMI|mm1beta|myr2","myosin IC","protein-coding"]
[8280,"chr9",21033109,21033284,"+",0,"NA","promoter-TSS (NR_035438)","promoter-TSS (NR_035438)",-868,"NR_035438",100316681,null,"NR_035438","ENSMUSG00000084663","Mir1900","Mirn1900|mmu-mir-1900","microRNA 1900","ncRNA"]
[7159,"chr7",25718470,25720109,"+",0,"NA","promoter-TSS (NM_028771)","promoter-TSS (NM_028771)",-236,"NM_028771",52132,"Mm.278798","NM_028771","ENSMUSG00000002608","Ccdc97","1200014H14Rik|2810446P04Rik|AA545218|D7Ertd462e","coiled-coil domain containing 97","protein-coding"]
[6113,"chr5",31047649,31050005,"+",0,"NA","promoter-TSS (NM_001177621)","promoter-TSS (NM_001177621)",97,"NM_001177622",330064,"Mm.205463","NM_177870","ENSMUSG00000006641","Slc5a6","E430023I20","solute carrier family 5 (sodium-dependent vitamin transporter), member 6","protein-coding"]
[8111,"chr8",106415431,106415614,"+",0,"NA","5' UTR (NM_011764, exon 1 of 4)","5' UTR (NM_011764, exon 1 of 4)",183,"NM_011764",22751,"Mm.295582","NM_011764","ENSMUSG00000031907","Zfp90","6430515L01Rik|KRAB17|NK10|Zfp64|Zfp83|mKIAA1954","zinc finger protein 90","protein-coding"]
[841,"chr10",96616287,96618386,"+",0,"NA","exon (NM_007569, exon 1 of 2)","exon (NM_007569, exon 1 of 2)",335,"NM_007569",12226,"Mm.23811","NM_007569","ENSMUSG00000036478","Btg1","AI426953|AW546738","B cell translocation gene 1, anti-proliferative","protein-coding"]
[7869,"chr8",60982521,60984385,"+",0,"NA","promoter-TSS (NM_007711)","promoter-TSS (NM_007711)",-142,"NM_173874",12725,"Mm.25263","NM_007711","ENSMUSG00000004319","Clcn3","Clc3","chloride channel, voltage-sensitive 3","protein-coding"]
[8708,"chr9",116174045,116176804,"+",0,"NA","promoter-TSS (NM_029575)","promoter-TSS (NM_029575)",-61,"NM_009371",21813,"Mm.172346","NM_009371","ENSMUSG00000032440","Tgfbr2","1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII","transforming growth factor, beta receptor II","protein-coding"]
[5548,"chr4",49520370,49521523,"+",0,"NA","promoter-TSS (NM_001289901)","promoter-TSS (NM_001289901)",137,"NM_178603",28028,"Mm.30052","NM_178603","ENSMUSG00000044018","Mrpl50","AA408971|AI317351|D4Wsu125e","mitochondrial ribosomal protein L50","protein-coding"]
[1751,"chr12",28675010,28675888,"+",0,"NA","intron (NM_134052, intron 1 of 3)","CpG",242,"NM_134052",104923,"Mm.291504","NM_134052","ENSMUSG00000020629","Adi1","AL024210|Fe-ARD|MTCBP-1|Ni-ARD","acireductone dioxygenase 1","protein-coding"]
[8510,"chr9",70012015,70013502,"+",0,"NA","5' UTR (NM_001282083, exon 1 of 5)","5' UTR (NM_001282083, exon 1 of 5)",210,"NM_001282083",235459,"Mm.293117","NM_199151","ENSMUSG00000033543","Gtf2a2","TFIIA-gamma|TfIIg|Tfiia2","general transcription factor II A, 2","protein-coding"]
[7402,"chr7",80947111,80948207,"+",0,"NA","promoter-TSS (NM_019951)","promoter-TSS (NM_019951)",-109,"NM_019951",56529,"Mm.43760","NM_019951","ENSMUSG00000025724","Sec11a","1810012E07Rik|18kDa|Sec11l1|Sid2895p|Spc18|sid2895","SEC11 homolog A, signal peptidase complex subunit","protein-coding"]
[2121,"chr13",48260321,48262822,"+",0,"NA","exon (NM_031166, exon 1 of 3)","exon (NM_031166, exon 1 of 3)",144,"NM_031166",15904,"Mm.458006","NM_031166","ENSMUSG00000021379","Id4","Idb4|bHLHb27","inhibitor of DNA binding 4","protein-coding"]
[474,"chr1",182515608,182519632,"+",0,"NA","promoter-TSS (NM_009794)","promoter-TSS (NM_009794)",-137,"NM_009794",12334,"Mm.19306","NM_009794","ENSMUSG00000026509","Capn2","AI326419|Capa-2|Capa2|m-calpain|m-calpin","calpain 2","protein-coding"]
[3563,"chr17",37482898,37486305,"+",0,"NA","Intergenic","Intergenic",-1072,"NM_008204",14990,"Mm.329041","NM_008204","ENSMUSG00000016283","H2-M2","H-2M2|Thy19.4","histocompatibility 2, M region locus 2","protein-coding"]
[8324,"chr9",32223567,32225172,"+",0,"NA","5' UTR (NM_177379, exon 1 of 13)","5' UTR (NM_177379, exon 1 of 13)",120,"NM_177379",330914,"Mm.46683","NM_177379","ENSMUSG00000041444","Arhgap32","3426406O18Rik|Gc-gap|Grit|Px-rics|Rics|mKIAA0712|p200Rhogap|p250Gap","Rho GTPase activating protein 32","protein-coding"]
[7552,"chr7",118584091,118585114,"+",0,"NA","promoter-TSS (NM_172476)","promoter-TSS (NM_172476)",84,"NM_172476",209760,"Mm.69380","NM_172476","ENSMUSG00000042246","Tmc7","1700030H01Rik|C230064B05|C630024K23Rik","transmembrane channel-like gene family 7","protein-coding"]
[6024,"chr4",155773706,155777139,"+",0,"NA","promoter-TSS (NM_147776)","promoter-TSS (NM_147776)",-861,"NM_147776",246228,"Mm.26515","NM_147776","ENSMUSG00000042116","Vwa1","4932416A11Rik|WARP","von Willebrand factor A domain containing 1","protein-coding"]
[4058,"chr19",6117633,6120385,"+",0,"NA","promoter-TSS (NM_133678)","promoter-TSS (NM_133678)",-423,"NM_133678",66406,"Mm.303924","NM_133678","ENSMUSG00000024790","Sac3d1","2410004C24Rik|AU015683|shd1","SAC3 domain containing 1","protein-coding"]
[2953,"chr15",100551304,100552662,"+",0,"NA","promoter-TSS (NM_001289603)","promoter-TSS (NM_001289603)",25,"NM_033476",21422,"Mm.219040","NM_033476","ENSMUSG00000009733","Tfcp2","CP-2|CP2|D230015P20Rik|LBP-1c|LBP-1d|LBP1|LSF|Tcfcp2|UBP-1","transcription factor CP2","protein-coding"]
[6947,"chr6",122874556,122875211,"+",0,"NA","intron (NM_026267, intron 1 of 7)","CpG",326,"NM_026267",67602,"Mm.288114","NM_026267","ENSMUSG00000030327","Necap1","1200016B17Rik|AI747569|mFLJ00061","NECAP endocytosis associated 1","protein-coding"]
[6085,"chr5",24576951,24578445,"+",0,"NA","promoter-TSS (NM_013853)","promoter-TSS (NM_013853)",-231,"NM_001190443",27407,"Mm.21629","NM_013853","ENSMUSG00000028953","Abcf2","0710005O05Rik|Drr3|E430001O06","ATP-binding cassette, sub-family F (GCN20), member 2","protein-coding"]
[7549,"chr7",118242430,118245032,"+",0,"NA","promoter-TSS (NR_027879)","promoter-TSS (NR_027879)",-94,"NM_001031814",233789,"Mm.309053","NM_177180","ENSMUSG00000030655","Smg1","2610207I05Rik|5430435M13Rik|C130002K18Rik|mKIAA0421","SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)","protein-coding"]
[6715,"chr6",42692820,42692973,"+",0,"NA","intron (NM_029930, intron 1 of 7)","intron (NM_029930, intron 1 of 7)",163,"NM_029930",77574,"Mm.24652","NM_029930","ENSMUSG00000036667","Tcaf1","2810407D09Rik|3321401G04Rik|A230020K05Rik|AI848529|Fam115a","TRPM8 channel-associated factor 1","protein-coding"]
[8899,"chrX",101221960,101222490,"+",0,"NA","intron (NM_001110311, intron 1 of 5)","CpG",338,"NM_001110311",55988,"Mm.206949","NM_018875","ENSMUSG00000046032","Snx12","2610001F05Rik|AW045757|SDP8","sorting nexin 12","protein-coding"]
[8745,"chr9",123212321,123216751,"+",0,"NA","intron (NM_133974, intron 1 of 8)","ID_B1|SINE|B4",1502,"NM_133974",109332,"Mm.27519","NM_133974","ENSMUSG00000035498","Cdcp1","9030022E12Rik|AA409659|E030027H19Rik","CUB domain containing protein 1","protein-coding"]
[3489,"chr17",33952784,33956490,"+",0,"NA","intron (NM_011296, intron 2 of 4)","intron (NM_011296, intron 2 of 4)",1004,"NM_011296",20084,"Mm.298745","NM_011296","ENSMUSG00000008668","Rps18","H-2Ke3|H2-Ke3|Ke-3|ke3","ribosomal protein S18","protein-coding"]
[7910,"chr8",70506128,70507085,"+",0,"NA","intron (NM_025577, intron 1 of 4)","CpG-14099",133,"NM_025577",66462,"Mm.28242","NM_025577","ENSMUSG00000058833","2810428I15Rik","-","RIKEN cDNA 2810428I15 gene","protein-coding"]
[5488,"chr4",35223939,35226673,"+",0,"NA","intron (NM_001081343, intron 1 of 10)","intron (NM_001081343, intron 1 of 10)",574,"NM_001081343",73205,"Mm.331544","NM_001081343","ENSMUSG00000028300","3110043O21Rik","AI840585","RIKEN cDNA 3110043O21 gene","protein-coding"]
[4106,"chr19",8888222,8889428,"+",0,"NA","promoter-TSS (NR_027866)","promoter-TSS (NR_027866)",-51,"NR_039598",100628605,null,"NR_039598","ENSMUSG00000093314","Mir5136","mmu-mir-5136|mu-mir-5136","microRNA 5136","ncRNA"]
[8884,"chrX",93631552,93632667,"+",0,"NA","promoter-TSS (NM_008892)","promoter-TSS (NM_008892)",46,"NM_008892",18968,"Mm.1923","NM_008892","ENSMUSG00000006678","Pola1","AW321876|Pola","polymerase (DNA directed), alpha 1","protein-coding"]
[6069,"chr5",21700513,21702064,"+",0,"NA","promoter-TSS (NM_178728)","promoter-TSS (NM_178728)",57,"NM_178728",242864,"Mm.153292","NM_178728","ENSMUSG00000044968","Napepld","A530089G06|Mbldc1|NAPE-PLD","N-acyl phosphatidylethanolamine phospholipase D","protein-coding"]
[4176,"chr19",30029269,30031283,"+",0,"NA","promoter-TSS (NM_144873)","promoter-TSS (NM_144873)",-237,"NM_144873",109113,"Mm.313364","NM_144873","ENSMUSG00000024817","Uhrf2","2310065A22Rik|AI426270|AW214556|D130071B19Rik|Nirf","ubiquitin-like, containing PHD and RING finger domains 2","protein-coding"]
[3628,"chr17",55712325,55712510,"+",0,"NA","intron (NM_028370, intron 1 of 16)","CpG",211,"NM_028370",72836,"Mm.177073","NM_028370","ENSMUSG00000024174","Pot1b","2810458H16Rik","protection of telomeres 1B","protein-coding"]
[7262,"chr7",36696355,36697598,"+",0,"NA","Intergenic","CpG",-1142,"NM_172298",243931,"Mm.44141","NM_172298","ENSMUSG00000021217","Tshz3","A630038G13Rik|Tsh3|Zfp537|mKIAA1474|teashirt3","teashirt zinc finger family member 3","protein-coding"]
[7557,"chr7",119720102,119721190,"+",0,"NA","exon (NM_145585, exon 1 of 4)","exon (NM_145585, exon 1 of 4)",152,"NM_145585",233802,"Mm.26392","NM_145585","ENSMUSG00000030942","Thumpd1","6330575P11Rik","THUMP domain containing 1","protein-coding"]
[5632,"chr4",101264189,101266169,"+",0,"NA","5' UTR (NM_146145, exon 1 of 25)","5' UTR (NM_146145, exon 1 of 25)",103,"NM_146145",16451,"Mm.289657","NM_146145","ENSMUSG00000028530","Jak1","AA960307|BAP004|C130039L05Rik","Janus kinase 1","protein-coding"]
[2418,"chr14",37134313,37135880,"+",0,"NA","promoter-TSS (NM_001199122)","promoter-TSS (NM_001199122)",43,"NM_001199122",66092,"Mm.182912","NM_078478","ENSMUSG00000041028","Ghitm","1010001P14Rik|C77840|MICS1|PTD010|Tmbim5","growth hormone inducible transmembrane protein","protein-coding"]
[305,"chr1",133130114,133134364,"+",0,"NA","exon (NM_133819, exon 1 of 2)","exon (NM_133819, exon 1 of 2)",1073,"NM_133819",108954,"Mm.293628","NM_133819","ENSMUSG00000046062","Ppp1r15b","1810033K10Rik|AI606441|C530022L24Rik|CReP","protein phosphatase 1, regulatory (inhibitor) subunit 15b","protein-coding"]
[8584,"chr9",98296050,98297615,"+",0,"NA","5' UTR (NM_144533, exon 1 of 5)","5' UTR (NM_144533, exon 1 of 5)",249,"NM_144533",74080,"Mm.294082","NM_144533","ENSMUSG00000032456","Nmnat3","4933408N02Rik|PNAT3","nicotinamide nucleotide adenylyltransferase 3","protein-coding"]
[928,"chr10",128367941,128369569,"+",0,"NA","exon (NM_001081040, exon 1 of 5)","exon (NM_001081040, exon 1 of 5)",1282,"NM_001081040",210582,"Mm.296876","NM_001081040","ENSMUSG00000039914","Coq10a","Gm1","coenzyme Q10 homolog A (yeast)","protein-coding"]
[7274,"chr7",43562277,43562857,"+",0,"NA","intron (NM_001008549, intron 1 of 4)","intron (NM_001008549, intron 1 of 4)",197,"NM_001008549",210104,"Mm.333821","NM_001008549","ENSMUSG00000056592","Zfp658","-","zinc finger protein 658","protein-coding"]
[8889,"chrX",95443873,95445603,"+",0,"NA","5' UTR (NM_175179, exon 1 of 2)","5' UTR (NM_175179, exon 1 of 2)",102,"NM_175179",72345,"Mm.182867","NM_175179","ENSMUSG00000050332","Amer1","2810002O09Rik|AW492303|Fam123b|Wtx","APC membrane recruitment 1","protein-coding"]
[1644,"chr11",117332058,117332729,"+",0,"NA","promoter-TSS (NM_001113488)","promoter-TSS (NM_001113488)",80,"NM_001113488",53860,"Mm.38450","NM_017380","ENSMUSG00000059248","2009-09-01","MSF1|Msf|PNUTL4|Sint1","septin 9","protein-coding"]
[4560,"chr2",73312088,73314191,"+",0,"NA","promoter-TSS (NM_025854)","promoter-TSS (NM_025854)",487,"NM_029022",74616,"Mm.247457","NM_029022","ENSMUSG00000008226","Scrn3","4833415E20Rik|AI427019|AV002033|Ses3","secernin 3","protein-coding"]
[4276,"chr19",47915122,47920184,"+",0,"NA","intron (NM_001001738, intron 1 of 1)","L3|LINE|CR1",1646,"NM_001001738",414801,"Mm.29457","NM_001001738",null,"Itprip","4833424O12Rik|DANGER|mKIAA1754","inositol 1,4,5-triphosphate receptor interacting protein","protein-coding"]
[8509,"chr9",69988852,69990065,"+",0,"NA","promoter-TSS (NM_001008238)","promoter-TSS (NM_001008238)",-8,"NM_016787",12175,"Mm.159777","NM_016787","ENSMUSG00000011958","Bnip2","5730523P12Rik|BNIP2beta|Nip21","BCL2/adenovirus E1B interacting protein 2","protein-coding"]
[4815,"chr2",148407216,148408838,"+",0,"NA","5' UTR (NM_009378, exon 1 of 1)","5' UTR (NM_009378, exon 1 of 1)",161,"NM_009378",21824,"Mm.24096","NM_009378","ENSMUSG00000074743","Thbd","AI385582|CD141|TM","thrombomodulin","protein-coding"]
[4076,"chr19",6987062,6988041,"+",0,"NA","promoter-TSS (NM_011697)","promoter-TSS (NM_011697)",100,"NM_001185164",22340,"Mm.15607","NM_011697","ENSMUSG00000024962","Vegfb","VEGF-B|Vrf","vascular endothelial growth factor B","protein-coding"]
[281,"chr1",125558600,125562458,"+",0,"NA","promoter-TSS (NM_028787)","promoter-TSS (NM_028787)",-487,"NM_028787",74150,"Mm.28654","NM_028787","ENSMUSG00000026342","Slc35f5","1300003P13Rik|AI646727","solute carrier family 35, member F5","protein-coding"]
[3832,"chr18",35498553,35499584,"+",0,"NA","promoter-TSS (NM_030749)","promoter-TSS (NM_030749)",-143,"NM_030749",81500,"Mm.291482","NM_030749","ENSMUSG00000024357","Sil1","1810057E01Rik|AI042831|wz","endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)","protein-coding"]
[3412,"chr17",27203386,27205078,"+",0,"NA","exon (NM_146075, exon 1 of 9)","exon (NM_146075, exon 1 of 9)",206,"NM_146075",224640,"Mm.29689","NM_146075","ENSMUSG00000044857","Lemd2","BC026588|Lem2|NET25","LEM domain containing 2","protein-coding"]
[4928,"chr2",164878248,164880550,"+",0,"NA","promoter-TSS (NM_146129)","promoter-TSS (NM_146129)",31,"NM_146129",228866,"Mm.241134","NM_146129",null,"Pcif1","2310022K11Rik|C20orf67|F730014I05Rik","PDX1 C-terminal inhibiting factor 1","protein-coding"]
[7382,"chr7",79742572,79742928,"+",0,"NA","promoter-TSS (NM_001037927)","promoter-TSS (NM_001037927)",275,"NM_011068",18631,"Mm.20615","NM_011068",null,"Pex11a","PEX11alpha","peroxisomal biogenesis factor 11 alpha","protein-coding"]
[8376,"chr9",45905651,45908190,"+",0,"NA","promoter-TSS (NM_001310840)","promoter-TSS (NM_001310840)",-9,"NM_001310840",235315,"Mm.3255","NM_178709","ENSMUSG00000042790","Rnf214","D130054N24Rik","ring finger protein 214","protein-coding"]
[6485,"chr5",135000101,135002208,"+",0,"NA","non-coding (NR_026907, exon 1 of 5)","non-coding (NR_026907, exon 1 of 5)",196,"NR_026907",71304,"Mm.482317","NR_026907","ENSMUSG00000054909","Wbscr25","4933433J03Rik|4933439O14Rik","Williams Beuren syndrome chromosome region 25 (human)","ncRNA"]
[5150,"chr3",88455174,88457455,"+",0,"NA","promoter-TSS (NM_013658)","promoter-TSS (NM_013658)",-553,"NM_013658",20351,"Mm.439752","NM_013658","ENSMUSG00000028064","Sema4a","AI132332|SemB|Semab","sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A","protein-coding"]
[748,"chr10",80166607,80168512,"+",0,"NA","promoter-TSS (NM_007705)","promoter-TSS (NM_007705)",-282,"NM_007705",12696,"Mm.17898","NM_007705","ENSMUSG00000045193","Cirbp","Cirp|R74941","cold inducible RNA binding protein","protein-coding"]
[1655,"chr11",118476553,118477315,"+",0,"NA","promoter-TSS (NM_172573)","promoter-TSS (NM_172573)",-26,"NM_172573",217364,"Mm.473963","NM_172573","ENSMUSG00000033857","Engase","C130099A03|D230014K01Rik","endo-beta-N-acetylglucosaminidase","protein-coding"]
[5077,"chr3",53863323,53864047,"+",0,"NA","intron (NM_026435, intron 1 of 5)","CpG",122,"NM_026435",67890,"Mm.23067","NM_026435","ENSMUSG00000027746","Ufm1","1810045K17Rik|AI132708|AI463323|ENSMUSG00000074598|Gm10726","ubiquitin-fold modifier 1","protein-coding"]
[1943,"chr12",102756637,102758928,"+",0,"NA","promoter-TSS (NM_025666)","promoter-TSS (NM_025666)",28,"NM_001142939",100859931,"Mm.291222","NM_001142939","ENSMUSG00000091931","Gm20604","AK010878-Moap1","predicted gene 20604","protein-coding"]
[6905,"chr6",113740278,113740737,"+",0,"NA","intron (NM_024206, intron 1 of 8)","intron (NM_024206, intron 1 of 8)",174,"NM_024206",110379,"Mm.29296","NM_024206","ENSMUSG00000030298","Sec13","1110003H02Rik|Sec13l1|Sec13r","SEC13 homolog, nuclear pore and COPII coat complex component","protein-coding"]
[3779,"chr18",14782306,14783872,"+",0,"NA","promoter-TSS (NM_001100449)","promoter-TSS (NM_001100449)",-156,"NM_001100449",72504,"Mm.312233","NM_001100449","ENSMUSG00000054321","Taf4b","105kDa|2610524B04Rik|4932409F03Rik|AW987595|TAFII-105|TAFII105|Taf2c2","TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor","protein-coding"]
[5724,"chr4",118288923,118292924,"+",0,"NA","intron (NM_011213, intron 1 of 32)","CpG",474,"NM_011213",19268,"Mm.29855","NM_011213","ENSMUSG00000033295","Ptprf","AA591035|LAR|LARS|RPTP-LAR","protein tyrosine phosphatase, receptor type, F","protein-coding"]
[3747,"chr18",3336426,3338615,"+",0,"NA","promoter-TSS (NM_001110852)","promoter-TSS (NM_001110852)",69,"NM_001110851",12916,"Mm.5244","NM_013498","ENSMUSG00000063889","Crem","ICER|ICERI","cAMP responsive element modulator","protein-coding"]
[6060,"chr5",9160852,9162313,"+",0,"NA","intron (NM_011806, intron 1 of 17)","CpG",194,"NM_001110327",23857,"Mm.22480","NM_011806","ENSMUSG00000042508","Dmtf1","Dimp|Dmp1","cyclin D binding myb-like transcription factor 1","protein-coding"]
[8684,"chr9",109931190,109933638,"+",0,"NA","intron (NM_008633, intron 1 of 18)","CpG",640,"NM_008633",17758,"Mm.217318","NM_008633","ENSMUSG00000032479","Map4","AA407148|MAP-4|Mtap-4|Mtap4","microtubule-associated protein 4","protein-coding"]
[7669,"chr7",138908524,138909830,"+",0,"NA","intron (NM_009760, intron 1 of 5)","PB1D7|SINE|Alu",329,"NM_009760",12176,"Mm.378890","NM_009760","ENSMUSG00000078566","Bnip3","Nip3","BCL2/adenovirus E1B interacting protein 3","protein-coding"]
[5369,"chr3",135422696,135424091,"+",0,"NA","promoter-TSS (NM_025902)","promoter-TSS (NM_025902)",40,"NM_025902",67006,"Mm.269993","NM_025902","ENSMUSG00000028165","Cisd2","1500009M05Rik|1500026J14Rik|1500031D15Rik|AI848398|B630006A20Rik|Miner1|Noxp70|Zcd2","CDGSH iron sulfur domain 2","protein-coding"]
[1018,"chr11",21238365,21240259,"+",0,"NA","5' UTR (NM_139061, exon 1 of 23)","5' UTR (NM_139061, exon 1 of 23)",280,"NM_001290628",245944,"Mm.170103","NM_139061","ENSMUSG00000020128","Vps54","Hcc8|Vps54l|mSLP8|wr","vacuolar protein sorting 54 (yeast)","protein-coding"]
[1125,"chr11",54521724,54523522,"+",0,"NA","promoter-TSS (NM_175258)","promoter-TSS (NM_175258)",-222,"NM_001252494",192786,"Mm.254404","NM_175258","ENSMUSG00000037533","Rapgef6","A530068K01|AI844632|BB085664|C030018K18Rik|PDZ-GEF2|Pdzgef2|RA-GEF-2|Ragef2|mKIAA4052","Rap guanine nucleotide exchange factor (GEF) 6","protein-coding"]
[741,"chr10",79996017,79997802,"+",0,"NA","promoter-TSS (NM_013850)","promoter-TSS (NM_013850)",-706,"NM_013850",27403,"Mm.103351","NM_013850","ENSMUSG00000035722","Abca7","ABCX|Abc51","ATP-binding cassette, sub-family A (ABC1), member 7","protein-coding"]
[2806,"chr15",78405228,78407248,"+",0,"NA","promoter-TSS (NM_001162492)","promoter-TSS (NM_001162492)",-379,"NM_009437",22117,"Mm.15312","NM_009437","ENSMUSG00000044986","Tst","Rhodanese","thiosulfate sulfurtransferase, mitochondrial","protein-coding"]
[7922,"chr8",70773210,70777939,"+",0,"NA","intron (NM_008841, intron 1 of 15)","intron (NM_008841, intron 1 of 15)",1138,"NM_008841",18709,"Mm.12945","NM_008841","ENSMUSG00000031834","Pik3r2","p85beta","phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta)","protein-coding"]
[7439,"chr7",92740774,92742781,"+",0,"NA","promoter-TSS (NR_015510)","promoter-TSS (NR_015510)",63,"NM_029494",75985,"Mm.323004","NM_029494","ENSMUSG00000030643","Rab30","5033421K01Rik|AI323892|Rsb30","RAB30, member RAS oncogene family","protein-coding"]
[3032,"chr16",13818264,13819796,"+",0,"NA","promoter-TSS (NM_010946)","promoter-TSS (NM_010946)",-247,"NM_010946",18203,"Mm.380410","NM_010946","ENSMUSG00000022681","Ntan1","-","N-terminal Asn amidase","protein-coding"]
[8733,"chr9",121856211,121858541,"+",0,"NA","intron (NM_019814, intron 1 of 3)","CpG",624,"NM_019814",56295,"Mm.347915","NM_019814","ENSMUSG00000038412","Higd1a","2210020B17Rik|7420700H20Rik|AI303276|AW049839|HIMP1|Hig1","HIG1 domain family, member 1A","protein-coding"]
[3880,"chr18",49831134,49833589,"+",0,"NA","promoter-TSS (NM_001081371)","promoter-TSS (NM_001081371)",-636,"NM_001081371",240283,"Mm.257790","NM_001081371","ENSMUSG00000037416","Dmxl1","C630007L23Rik|D030030C22","Dmx-like 1","protein-coding"]
[3192,"chr16",56075142,56076291,"+",0,"NA","intron (NM_001003973, intron 1 of 5)","CpG",236,"NM_001304503",66315,"Mm.255784","NM_025483","ENSMUSG00000052917","Senp7","2410152H17Rik|2810413I22Rik|2900036C23Rik|6030449K19Rik|AI790676","SUMO1/sentrin specific peptidase 7","protein-coding"]
[4294,"chr19",57452985,57453158,"+",0,"NA","exon (NM_029839, exon 1 of 7)","exon (NM_029839, exon 1 of 7)",165,"NM_028115",72133,"Mm.258404","NM_028115","ENSMUSG00000025086","Trub1","2610009I02Rik|9030425C13Rik|AI448235|BB118943|C76870","TruB pseudouridine (psi) synthase homolog 1 (E. coli)","protein-coding"]
[5159,"chr3",88913400,88914777,"+",0,"NA","promoter-TSS (NM_144898)","promoter-TSS (NM_144898)",-138,"NM_144898",229524,"Mm.440405","NM_144898","ENSMUSG00000068922","Msto1","BC008103|mst","misato homolog 1 (Drosophila)","protein-coding"]
[1545,"chr11",103411927,103413461,"+",0,"NA","promoter-TSS (NM_183034)","promoter-TSS (NM_183034)",-30,"NM_183034",353047,"Mm.18556","NM_183034","ENSMUSG00000034247","Plekhm1","AP162|B2|BC038943|D330036J23Rik","pleckstrin homology domain containing, family M (with RUN domain) member 1","protein-coding"]
[8352,"chr9",44232893,44234862,"+",0,"NA","exon (NM_007619, exon 1 of 16)","exon (NM_007619, exon 1 of 16)",169,"NM_007619",12402,"Mm.266871","NM_007619","ENSMUSG00000034342","Cbl","4732447J05Rik|Cbl-2|c-Cbl|cbl","Casitas B-lineage lymphoma","protein-coding"]
[6468,"chr5",130028991,130029859,"+",0,"NA","intron (NM_007761, intron 1 of 5)","CpG",119,"NM_007761",12909,"Mm.18072","NM_007761","ENSMUSG00000025532","Crcp","AL022669","calcitonin gene-related peptide-receptor component protein","protein-coding"]
[1058,"chr11",35768839,35770410,"+",0,"NA","5' UTR (NM_145962, exon 1 of 7)","5' UTR (NM_145962, exon 1 of 7)",129,"NM_145962",211347,"Mm.255044","NM_145962","ENSMUSG00000018846","Pank3","-","pantothenate kinase 3","protein-coding"]
[7561,"chr7",120634438,120635950,"+",0,"NA","promoter-TSS (NM_025899)","promoter-TSS (NM_025899)",5,"NM_025899",67003,"Mm.334206","NM_025899","ENSMUSG00000030884","Uqcrc2","1500004O06Rik","ubiquinol cytochrome c reductase core protein 2","protein-coding"]
[4989,"chr2",180966754,180968509,"+",0,"NA","5' UTR (NM_001177707, exon 2 of 13)","5' UTR (NM_001177707, exon 2 of 13)",331,"NM_001177706",228998,"Mm.33765","NM_145760","ENSMUSG00000027575","Arfgap1","AI115377|Arf1gap","ADP-ribosylation factor GTPase activating protein 1","protein-coding"]
[6192,"chr5",53588337,53591303,"+",0,"NA","promoter-TSS (NM_001080927)","promoter-TSS (NM_001080927)",-526,"NM_009035",19664,"Mm.209292","NM_009035","ENSMUSG00000039191","Rbpj","AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBP-Jkappa|RBPjk|Rbpsuh","recombination signal binding protein for immunoglobulin kappa J region","protein-coding"]
[5417,"chr3",157533896,157535088,"+",0,"NA","promoter-TSS (NM_017381)","promoter-TSS (NM_017381)",95,"NM_017381",53861,"Mm.259036","NM_017381","ENSMUSG00000028180","Zranb2","AI227013|Zfp265|Zis|Znf265","zinc finger, RAN-binding domain containing 2","protein-coding"]
[8306,"chr9",22156106,22157465,"+",0,"NA","promoter-TSS (NM_001082532)","promoter-TSS (NM_001082532)",-61,"NM_001082532",66268,"Mm.28924","NM_025457","ENSMUSG00000010607","Pigyl","1810008A14Rik|PIG-Y|Pigy","phosphatidylinositol glycan anchor biosynthesis, class Y-like","protein-coding"]
[6211,"chr5",66617926,66619237,"+",0,"NA","5' UTR (NM_001201414, exon 1 of 16)","5' UTR (NM_001201414, exon 1 of 16)",236,"NM_009686",11787,"Mm.5159","NM_009686","ENSMUSG00000029207","Apbb2","2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra","amyloid beta (A4) precursor protein-binding, family B, member 2","protein-coding"]
[8181,"chr8",120113403,120118000,"+",0,"NA","intron (NM_172286, intron 1 of 12)","PB1D10|SINE|Alu",1549,"NM_001163761",234797,"Mm.101958","NM_172286","ENSMUSG00000031824","6430548M08Rik","AW049007|Kiaa0513|mKIAA0513","RIKEN cDNA 6430548M08 gene","protein-coding"]
[3141,"chr16",34690588,34691316,"+",0,"NA","intron (NM_172824, intron 1 of 12)","CpG",336,"NM_172824",239839,"Mm.272045","NM_172824","ENSMUSG00000022833","Ccdc14","G630039H03Rik","coiled-coil domain containing 14","protein-coding"]
[1535,"chr11",102555531,102556843,"+",0,"NA","promoter-TSS (NM_001159492)","promoter-TSS (NM_001159492)",-29,"NM_001159492",237943,"Mm.260282","NM_001159492","ENSMUSG00000034621","Gpatch8","5430405G24Rik|AU018890|ENSMUSG00000075516|Fbm1|Gpatc8|mKIAA0553","G patch domain containing 8","protein-coding"]
[5299,"chr3",107630816,107632912,"+",0,"NA","promoter-TSS (NM_153563)","promoter-TSS (NM_153563)",-154,"NM_153563",229707,"Mm.278643","NM_153563","ENSMUSG00000014601","Strip1","6330569M22Rik|6530401O14Rik|Fam40a","striatin interacting protein 1","protein-coding"]
[4978,"chr2",180069998,180071396,"+",0,"NA","TTS (NM_178750)","TTS (NM_178750)",104,"NM_001083329",52856,"Mm.219658","NM_028422","ENSMUSG00000039069","Mtg2","1810011P19Rik|2900056P18Rik|D2Bwg0647e|Gtpbp5","mitochondrial ribosome associated GTPase 2","protein-coding"]
[3775,"chr18",12740128,12741768,"+",0,"NA","promoter-TSS (NM_027687)","promoter-TSS (NM_027687)",-407,"NM_001042419",71132,"Mm.179740","NM_027687","ENSMUSG00000024430","Cabyr","1700016C01Rik|4933421A18Rik|CBP86|FSP-2","calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)","protein-coding"]
[5258,"chr3",96904744,96905825,"+",0,"NA","promoter-TSS (NM_026229)","promoter-TSS (NM_026229)",14,"NM_026229",67549,"Mm.46722","NM_026229",null,"Gpr89","4933412D19Rik|Gpr89a|SH120","G protein-coupled receptor 89","protein-coding"]
[7718,"chr7",143598905,143600725,"+",0,"NA","intron (NM_013742, intron 1 of 22)","intron (NM_013742, intron 1 of 22)",275,"NM_001252593",27267,"Mm.125659","NM_013742","ENSMUSG00000010755","Cars","CA3","cysteinyl-tRNA synthetase","protein-coding"]
[5690,"chr4",115737741,115738630,"+",0,"NA","5' UTR (NM_172698, exon 1 of 12)","5' UTR (NM_172698, exon 1 of 12)",112,"NM_172698",230648,"Mm.283565","NM_172698","ENSMUSG00000034210","Efcab14","4732418C07Rik","EF-hand calcium binding domain 14","protein-coding"]
[1335,"chr11",80080439,80081755,"+",0,"NA","promoter-TSS (NM_001277106)","promoter-TSS (NM_001277106)",-106,"NM_018776",54394,"Mm.272093","NM_018776","ENSMUSG00000017561","Crlf3","BB164954|Creme9|Cytor4","cytokine receptor-like factor 3","protein-coding"]
[4652,"chr2",109917085,109918406,"+",0,"NA","promoter-TSS (NM_172671)","promoter-TSS (NM_172671)",98,"NM_172671",107515,"Mm.277351","NM_172671","ENSMUSG00000050199","Lgr4","9130225G07|A330106J01Rik|A930009A08Rik|Gpr48","leucine-rich repeat-containing G protein-coupled receptor 4","protein-coding"]
[3780,"chr18",15062754,15066057,"+",0,"NA","promoter-TSS (NM_001142731)","promoter-TSS (NM_001142731)",-823,"NM_001142731",106931,"Mm.329299","NM_134112","ENSMUSG00000036225","Kctd1","4933402K10Rik|AI661543|AW553000","potassium channel tetramerisation domain containing 1","protein-coding"]
[4847,"chr2",153237381,153241863,"+",0,"NA","intron (NM_018807, intron 1 of 2)","intron (NM_018807, intron 1 of 2)",1736,"NM_018807",54711,"Mm.103199","NM_018807","ENSMUSG00000051413","Plagl2","AU018672|AW552839|mKIAA0198","pleiomorphic adenoma gene-like 2","protein-coding"]
[5240,"chr3",95754395,95754816,"+",0,"NA","intron (NM_027931, intron 1 of 17)","intron (NM_027931, intron 1 of 17)",372,"NM_027931",71807,"Mm.271754","NM_027931","ENSMUSG00000028107","Tars2","2610024N01Rik|AI429208|Tarsl1","threonyl-tRNA synthetase 2, mitochondrial (putative)","protein-coding"]
[165,"chr1",74390443,74392464,"+",0,"NA","promoter-TSS (NM_153088)","promoter-TSS (NM_153088)",-156,"NM_153088",227292,"Mm.165042","NM_153088","ENSMUSG00000026176","Ctdsp1","GIP|NLIIF|Nif3|SCP1","CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1","protein-coding"]
[6588,"chr5",145113562,145115083,"+",0,"NA","promoter-TSS (NM_023142)","promoter-TSS (NM_023142)",66,"NM_023142",11867,"Mm.30010","NM_023142","ENSMUSG00000029622","Arpc1b","41kDa|AA408064|AA408534|AA571392|AF007010|AW208418|L72|SOP2Hs|p41-ARC","actin related protein 2/3 complex, subunit 1B","protein-coding"]
[4579,"chr2",80616805,80617599,"+",0,"NA","promoter-TSS (NM_024438)","promoter-TSS (NM_024438)",-12,"NM_024438",68082,"Mm.306818","NM_024438","ENSMUSG00000027001","Dusp19","5930436K22Rik|C79103|SKRP1|TS-DSP1","dual specificity phosphatase 19","protein-coding"]
[4509,"chr2",48813257,48815524,"+",0,"NA","5' UTR (NM_007396, exon 1 of 11)","5' UTR (NM_007396, exon 1 of 11)",281,"NM_007396",11480,"Mm.314338","NM_007396","ENSMUSG00000052155","Acvr2a","ActrIIa|Acvr2|TactrII","activin receptor IIA","protein-coding"]
[6074,"chr5",23614957,23617845,"+",0,"NA","5' UTR (NM_009274, exon 1 of 15)","5' UTR (NM_009274, exon 1 of 15)",170,"NM_009274",20817,"Mm.288728","NM_009274","ENSMUSG00000062604","Srpk2","AW226533|AW492537|AW547358|Wbp6|mSRPK2","serine/arginine-rich protein specific kinase 2","protein-coding"]
[2553,"chr14",69767619,69767840,"+",0,"NA","TTS (NR_130157)","TTS (NR_130157)",257,"NM_020275",21933,"Mm.193430","NM_020275","ENSMUSG00000022074","Tnfrsf10b","DR5|KILLER|Ly98|MK|TRAILR2|TRICK2A|TRICK2B|TRICKB","tumor necrosis factor receptor superfamily, member 10b","protein-coding"]
[2979,"chr15",103163061,103163258,"+",0,"NA","intron (NM_027885, intron 1 of 5)","intron (NM_027885, intron 1 of 5)",125,"NM_027885",71726,"Mm.254820","NM_027885",null,"Smug1","1200013B09Rik|A930006H09Rik|C85220","single-strand selective monofunctional uracil DNA glycosylase","protein-coding"]
[3270,"chr16",96126434,96128420,"+",0,"NA","intron (NM_008251, intron 2 of 5)","CpG-5899",298,"NM_008251",15312,"Mm.2756","NM_008251",null,"Hmgn1","HMG-14|Hmg14","high mobility group nucleosomal binding domain 1","protein-coding"]
[7880,"chr8",66860310,66861072,"+",0,"NA","exon (NM_001163564, exon 1 of 8)","exon (NM_001163564, exon 1 of 8)",474,"NM_001163564",234344,"Mm.334561","NM_001163564","ENSMUSG00000014907","Naf1","Gm174","nuclear assembly factor 1 homolog (S. cerevisiae)","protein-coding"]
[2961,"chr15",101283445,101284988,"+",0,"NA","promoter-TSS (NM_026566)","promoter-TSS (NM_026566)",-85,"NM_026566",68118,"Mm.482360","NM_026566","ENSMUSG00000037204","Atg101","9430023L20Rik|AA407441|AU022967","autophagy related 101","protein-coding"]
[2569,"chr14",72709353,72710420,"+",0,"NA","5' UTR (NM_207636, exon 1 of 26)","5' UTR (NM_207636, exon 1 of 26)",117,"NM_207636",319448,"Mm.205421","NM_207636","ENSMUSG00000033487","Fndc3a","1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys","fibronectin type III domain containing 3A","protein-coding"]
[8824,"chrX",48255914,48257315,"+",0,"NA","promoter-TSS (NM_028276)","promoter-TSS (NM_028276)",-320,"NM_028276",72554,"Mm.336045","NM_028276","ENSMUSG00000063785","Utp14a","2700066J21Rik|JsdX|NY-CO-16|SDCCAG16|T25628|mKIAA0266","UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)","protein-coding"]
[319,"chr1",135257525,135259661,"+",0,"NA","promoter-TSS (NM_001163131)","promoter-TSS (NM_001163131)",-121,"NM_007921",13710,"Mm.441439","NM_007921","ENSMUSG00000003051","Elf3","ESE-1|ESX|jen","E74-like factor 3","protein-coding"]
[2571,"chr14",73237338,73239555,"+",0,"NA","5' UTR (NM_175116, exon 1 of 1)","5' UTR (NM_175116, exon 1 of 1)",555,"NM_175116",67168,"Mm.390681","NM_175116",null,"Lpar6","2610302I02Rik|P2ry5|P2y5","lysophosphatidic acid receptor 6","protein-coding"]
[1179,"chr11",61265751,61268314,"+",0,"NA","5' UTR (NM_007437, exon 1 of 10)","5' UTR (NM_007437, exon 1 of 10)",154,"NM_007437",11671,"Mm.398221","NM_007437","ENSMUSG00000010025","Aldh3a2","AI194803|Ahd-3|Ahd-3r|Ahd3|Ahd3-r|Aldh4|Aldh4-r|FALDH","aldehyde dehydrogenase family 3, subfamily A2","protein-coding"]
[1922,"chr12",98736662,98738023,"+",0,"NA","promoter-TSS (NM_001146199)","promoter-TSS (NM_001146199)",63,"NM_001146199",24000,"Mm.4420","NM_011877","ENSMUSG00000021009","Ptpn21","PTPD1|PTPRL10","protein tyrosine phosphatase, non-receptor type 21","protein-coding"]
[735,"chr10",79793884,79795050,"+",0,"NA","intron (NM_001161747, intron 1 of 7)","intron (NM_001161747, intron 1 of 7)",895,"NM_001161747",18483,"Mm.34650","NM_023128","ENSMUSG00000035863","Palm","-","paralemmin","protein-coding"]
[2948,"chr15",100305517,100305681,"+",0,"NA","intron (NM_027334, intron 1 of 1)","intron (NM_027334, intron 1 of 1)",782,"NM_027334",70152,"Mm.488086","NM_027334","ENSMUSG00000054619","Mettl7a1","2210414H16Rik|3300001H21Rik|Aam-B|Mettl7a|UbiE1","methyltransferase like 7A1","protein-coding"]
[8654,"chr9",108094075,108095536,"+",0,"NA","promoter-TSS (NM_146226)","promoter-TSS (NM_146226)",-325,"NM_146226",235606,"Mm.219639","NM_146226","ENSMUSG00000032590","Apeh","-","acylpeptide hydrolase","protein-coding"]
[1271,"chr11",74648759,74652784,"+",0,"NA","intron (NM_001081158, intron 1 of 25)","intron (NM_001081158, intron 1 of 25)",1276,"NM_001081158",74148,"Mm.214574","NM_001081158","ENSMUSG00000020741","Cluh","1300001I01Rik|Kiaa0664|mKIAA0664","clustered mitochondria (cluA/CLU1) homolog","protein-coding"]
[6921,"chr6",118419227,118420123,"+",0,"NA","promoter-TSS (NM_194339)","promoter-TSS (NM_194339)",-258,"NM_194339",213895,"Mm.25269","NM_194339","ENSMUSG00000030138","Bms1","AA408648|AU020092|AU043373|BB007109|BC030906|Bms1l|mKIAA0187","BMS1 homolog, ribosome assembly protein (yeast)","protein-coding"]
[4566,"chr2",75701987,75705324,"+",0,"NA","intron (NR_132727, intron 1 of 1)","CpG",1008,"NR_132727",18024,"Mm.1025","NM_010902","ENSMUSG00000015839","Nfe2l2","Nrf2","nuclear factor, erythroid derived 2, like 2","protein-coding"]
[8781,"chrX",10716839,10719103,"+",0,"NA","intron (NM_026524, intron 1 of 1)","CpG",606,"NM_001166635",68041,"Mm.29429","NM_026524","ENSMUSG00000008035","Mid1ip1","3110038L01Rik|Mig12|S14R","Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))","protein-coding"]
[7324,"chr7",45872801,45874012,"+",0,"NA","intron (NM_133950, intron 1 of 4)","intron (NM_133950, intron 1 of 4)",566,"NM_133950",68137,"Mm.298433","NM_133950","ENSMUSG00000002778","Kdelr1","8030486F04Rik|AW215843|Erd2.1","KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1","protein-coding"]
[1710,"chr12",3806751,3807491,"+",0,"NA","promoter-TSS (NM_001271753)","promoter-TSS (NM_001271753)",-39,"NM_001271753",13435,"Mm.5001","NM_007872","ENSMUSG00000020661","Dnmt3a","MmuIIIA","DNA methyltransferase 3A","protein-coding"]
[4783,"chr2",132144686,132145472,"+",0,"NA","promoter-TSS (NM_018824)","promoter-TSS (NM_018824)",29,"NM_018824",54338,"Mm.103581","NM_018824","ENSMUSG00000027340","Slc23a2","AI844736|NBTL1|SVCT2|Slc23a1|YSPL2|YSPL3|mKIAA0238","solute carrier family 23 (nucleobase transporters), member 2","protein-coding"]
[1133,"chr11",57517980,57519016,"+",0,"NA","promoter-TSS (NM_145426)","promoter-TSS (NM_145426)",146,"NM_001168667",67726,"Mm.25632","NM_026342","ENSMUSG00000020523","Fam114a2","1810073G14Rik|9030624B09Rik","family with sequence similarity 114, member A2","protein-coding"]
[6271,"chr5",93265227,93268926,"+",0,"NA","promoter-TSS (NM_007635)","promoter-TSS (NM_007635)",-497,"NM_007635",12452,"Mm.3527","NM_007635","ENSMUSG00000029385","Ccng2","-","cyclin G2","protein-coding"]
[5476,"chr4",32950564,32950800,"+",0,"NA","intron (NM_001012451, intron 1 of 15)","CpG",144,"NM_001012451",140577,"Mm.214766","NM_080471","ENSMUSG00000040183","Ankrd6","-","ankyrin repeat domain 6","protein-coding"]
[2421,"chr14",41013098,41015055,"+",0,"NA","promoter-TSS (NM_001316734)","promoter-TSS (NM_001316734)",-243,"NM_001316737",70564,"Mm.27227","NM_027464","ENSMUSG00000021792","Fam213a","5730469M10Rik|AU040822|Pamm","family with sequence similarity 213, member A","protein-coding"]
[2837,"chr15",80709582,80712077,"+",0,"NA","promoter-TSS (NM_144812)","promoter-TSS (NM_144812)",-484,"NM_144812",213988,"Mm.131328","NM_144812","ENSMUSG00000047888","Tnrc6b","2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik","trinucleotide repeat containing 6b","protein-coding"]
[4456,"chr2",32150620,32154559,"+",0,"NA","intron (NM_001159634, intron 1 of 31)","intron (NM_001159634, intron 1 of 31)",1441,"NM_001159634",227723,"Mm.25504","NM_172661","ENSMUSG00000039262","Prrc2b","5830434P21Rik|AI173903|Bat2l|Bat2l1|D430039P21|mKIAA0515","proline-rich coiled-coil 2B","protein-coding"]
[4132,"chr19",12595668,12596351,"+",0,"NA","non-coding (NR_015503, exon 1 of 2)","non-coding (NR_015503, exon 1 of 2)",557,"NR_015503",74333,"Mm.329744","NR_015503","ENSMUSG00000086213","A330040F15Rik","-","RIKEN cDNA A330040F15 gene","ncRNA"]
[1118,"chr11",53518928,53521752,"+",0,"NA","intron (NM_033144, intron 1 of 9)","intron (NM_033144, intron 1 of 9)",604,"NM_001252333",20362,"Mm.274399","NM_033144","ENSMUSG00000018398","2008-09-01","AW046166|Sepl|mKIAA0202","septin 8","protein-coding"]
[1575,"chr11",107188776,107189274,"+",0,"NA","intron (NM_001161329, intron 1 of 17)","CpG",356,"NM_133702",68979,"Mm.294617","NM_133702","ENSMUSG00000018433","Nol11","1500002M01Rik|AU015220|AU019874","nucleolar protein 11","protein-coding"]
[5152,"chr3",88499757,88505085,"+",0,"NA","intron (NM_001002011, intron 1 of 11)","intron (NM_001002011, intron 1 of 11)",931,"NM_001111102",16905,"Mm.243014","NM_019390","ENSMUSG00000028063","Lmna","Dhe","lamin A","protein-coding"]
[7732,"chr8",3499921,3501014,"+",0,"NA","promoter-TSS (NM_053177)","promoter-TSS (NM_053177)",-52,"NM_053177",94178,"Mm.8356","NM_053177","ENSMUSG00000004567","Mcoln1","2210015I05Rik|TRPML1|mucolipidin","mucolipin 1","protein-coding"]
[6938,"chr6",120835555,120837613,"+",0,"NA","intron (NM_153516, intron 1 of 6)","CpG",354,"NM_153516",94044,"Mm.27990","NM_153516","ENSMUSG00000009112","Bcl2l13","BCL-RAMBO|E430016C20Rik|Mil-1|Mil1","BCL2-like 13 (apoptosis facilitator)","protein-coding"]
[2428,"chr14",46387032,46391336,"+",0,"NA","intron (NM_007554, intron 1 of 3)","intron (NM_007554, intron 1 of 3)",1485,"NM_001316360",12159,"Mm.6813","NM_007554","ENSMUSG00000021835","Bmp4","Bmp-4|Bmp2b|Bmp2b-1|Bmp2b1","bone morphogenetic protein 4","protein-coding"]
[5564,"chr4",57299388,57302299,"+",0,"NA","intron (NM_011207, intron 1 of 25)","intron (NM_011207, intron 1 of 25)",994,"NM_011207",545622,"Mm.246552","NM_011207","ENSMUSG00000038764","Ptpn3","9530011I20Rik|PTP-H1|PTPCL","protein tyrosine phosphatase, non-receptor type 3","protein-coding"]
[4718,"chr2",121357139,121358516,"+",0,"NA","promoter-TSS (NM_009897)","promoter-TSS (NM_009897)",-814,"NM_009897",12716,"Mm.252145","NM_009897","ENSMUSG00000000308","Ckmt1","Mt-CK|ScCKmit|UbCKmit|mi-CK","creatine kinase, mitochondrial 1, ubiquitous","protein-coding"]
[8628,"chr9",106788322,106789554,"+",0,"NA","intron (NM_030730, intron 1 of 21)","CpG",275,"NM_030730",81000,"Mm.246689","NM_030730","ENSMUSG00000040661","Rad54l2","Arip4|D130058C05|G630026H09Rik|Srisnf2l","RAD54 like 2 (S. cerevisiae)","protein-coding"]
[5561,"chr4",56862824,56866746,"+",0,"NA","intron (NM_018761, intron 1 of 18)","CpG",426,"NM_018761",54366,"Mm.218891","NM_018761","ENSMUSG00000038816","Ctnnal1","ACRP|AI616177|AW545119|C86009|Catnal1","catenin (cadherin associated protein), alpha-like 1","protein-coding"]
[7131,"chr7",19887547,19889230,"+",0,"NA","promoter-TSS (NM_177036)","promoter-TSS (NM_177036)",-423,"NM_177036",319930,"Mm.215839","NM_177036","ENSMUSG00000049848","Ceacam19","C130022P09Rik|CEAL1","carcinoembryonic antigen-related cell adhesion molecule 19","protein-coding"]
[4191,"chr19",34527167,34527333,"+",0,"NA","intron (NM_021460, intron 1 of 9)","intron (NM_021460, intron 1 of 9)",224,"NM_001111100",16889,"Mm.157545","NM_021460","ENSMUSG00000024781","Lipa","AA960673|Lal|Lip-1|Lip1","lysosomal acid lipase A","protein-coding"]
[600,"chr10",40347754,40351120,"+",0,"NA","5' UTR (NM_001168304, exon 1 of 13)","5' UTR (NM_001168304, exon 1 of 13)",129,"NM_001291816",78334,"Mm.200924","NM_198164","ENSMUSG00000038481","Cdk19","2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028","cyclin-dependent kinase 19","protein-coding"]
[80,"chr1",43933124,43935301,"+",0,"NA","exon (NM_009418, exon 1 of 30)","exon (NM_009418, exon 1 of 30)",218,"NM_009418",22019,"Mm.401675","NM_009418","ENSMUSG00000041763","Tpp2","TPP-2|TppII","tripeptidyl peptidase II","protein-coding"]
[336,"chr1",150099470,150100410,"+",0,"NA","promoter-TSS (NR_015466)","promoter-TSS (NR_015466)",-66,"NR_015466",320019,"Mm.353072","NR_015466","ENSMUSG00000097028","Ptgs2os","7530420F21Rik","prostaglandin-endoperoxide synthase 2, opposite strand","ncRNA"]
[6806,"chr6",82772439,82775588,"+",0,"NA","5' UTR (NM_013820, exon 1 of 18)","5' UTR (NM_013820, exon 1 of 18)",441,"NM_013820",15277,"Mm.255848","NM_013820","ENSMUSG00000000628","Hk2","AI642394|HKII","hexokinase 2","protein-coding"]
[457,"chr1",180725711,180726602,"+",0,"NA","exon (NM_133225, exon 1 of 8)","exon (NM_133225, exon 1 of 8)",113,"NM_133225",170760,"Mm.272981","NM_133225","ENSMUSG00000026499","Acbd3","60kDa|8430407O11Rik|D1Ertd10e|GCP60|GOLPH1|Gocap1|Pap7","acyl-Coenzyme A binding domain containing 3","protein-coding"]
[1301,"chr11",76998220,77000904,"+",0,"NA","intron (NM_010484, intron 1 of 13)","intron (NM_010484, intron 1 of 13)",965,"NM_010484",15567,"Mm.300318","NM_010484","ENSMUSG00000020838","Slc6a4","5-HTT|AI323329|Htt|Sert","solute carrier family 6 (neurotransmitter transporter, serotonin), member 4","protein-coding"]
[5247,"chr3",96103595,96105038,"+",0,"NA","promoter-TSS (NM_001025613)","promoter-TSS (NM_001025613)",-211,"NM_001025613",229603,"Mm.272336","NM_001025613","ENSMUSG00000038495","Otud7b","2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1","OTU domain containing 7B","protein-coding"]
[383,"chr1",163403389,163403978,"+",0,"NA","promoter-TSS (NM_001313738)","promoter-TSS (NM_001313738)",-14,"NM_178883",98376,"Mm.32901","NM_178883","ENSMUSG00000040124","Gorab","NTKL-BP1|SCYL1-BP1|Scyl1bp1","golgin, RAB6-interacting","protein-coding"]
[4945,"chr2",167491797,167493435,"+",0,"NA","promoter-TSS (NM_030743)","promoter-TSS (NM_030743)",-29,"NM_030743",81018,"Mm.22225","NM_030743","ENSMUSG00000006418","Rnf114","1110008J21Rik|AI225886|AW549494|Zfp228|Zfp313|Znf228","ring finger protein 114","protein-coding"]
[2532,"chr14",63121007,63125030,"+",0,"NA","intron (NM_007798, intron 1 of 9)","intron (NM_007798, intron 1 of 9)",556,"NM_007798",13030,"Mm.236553","NM_007798","ENSMUSG00000021939","Ctsb","CB","cathepsin B","protein-coding"]
[3817,"chr18",33213269,33215530,"+",0,"NA","promoter-TSS (NM_133774)","promoter-TSS (NM_133774)",-583,"NM_133774",170459,"Mm.127058","NM_133774",null,"Stard4","4632419C16Rik|9030213J02Rik|AA517649|AW324468","StAR-related lipid transfer (START) domain containing 4","protein-coding"]
[2497,"chr14",55745112,55746253,"+",0,"NA","promoter-TSS (NM_026403)","promoter-TSS (NM_026403)",2,"NM_026819",52585,"Mm.21623","NM_026819","ENSMUSG00000002332","Dhrs1","1110029G07Rik|AW112170|D14Ertd484e","dehydrogenase/reductase (SDR family) member 1","protein-coding"]
[8496,"chr9",66350024,66351466,"+",0,"NA","intron (NM_145617, intron 1 of 77)","CpG",295,"NM_145617",235439,"Mm.244179","NM_145617","ENSMUSG00000038664","Herc1","2810449H11Rik|B230218H07|D130015N03Rik|tbl","hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1","protein-coding"]
[92,"chr1",52630690,52631611,"+",0,"NA","intron (NR_024590, intron 1 of 8)","intron (NR_024590, intron 1 of 8)",445,"NM_001142647",227094,"Mm.83541","NM_172654","ENSMUSG00000043015","Tmem194b","5330401P04Rik|9830163O08|Nemp2","transmembrane protein 194B","protein-coding"]
[5354,"chr3",127893100,127896970,"+",0,"NA","intron (NM_027482, intron 1 of 1)","intron (NM_027482, intron 1 of 1)",1288,"NM_027482",70617,"Mm.317049","NM_027482",null,"5730508B09Rik","2700063A17Rik|C80506","RIKEN cDNA 5730508B09 gene","protein-coding"]
[8413,"chr9",54698398,54700249,"+",0,"NA","promoter-TSS (NM_021422)","promoter-TSS (NM_021422)",-236,"NM_021422",58233,"Mm.489676","NM_021422","ENSMUSG00000032285","Dnaja4","1110021L12Rik|AV358213|Dj4|Hsj4|mmDjA4","DnaJ (Hsp40) homolog, subfamily A, member 4","protein-coding"]
[3687,"chr17",71598141,71599125,"+",0,"NA","promoter-TSS (NR_027953)","promoter-TSS (NR_027953)",128,"NR_015549",68789,"Mm.75202","NR_015549","ENSMUSG00000085492","Trmt61b","1110039F03Rik|623451|Gm6431","tRNA methyltransferase 61B","ncRNA"]
[1164,"chr11",60045709,60046935,"+",0,"NA","intron (NM_001290012, intron 1 of 6)","CpG",167,"NM_001290012",18618,"Mm.2731","NM_008819","ENSMUSG00000000301","Pemt","PEAMT|PEMT2|Pempt|Pempt2","phosphatidylethanolamine N-methyltransferase","protein-coding"]
[5450,"chr4",14825340,14827232,"+",0,"NA","intron (NM_152812, intron 1 of 6)","intron (NM_152812, intron 1 of 6)",301,"NM_152812",72201,"Mm.387724","NM_152812","ENSMUSG00000040550","Otud6b","2600013N14Rik|AU015433","OTU domain containing 6B","protein-coding"]
[2824,"chr15",79658447,79659436,"+",0,"NA","promoter-TSS (NM_028634)","promoter-TSS (NM_028634)",15,"NM_029407",75729,"Mm.78946","NM_029407","ENSMUSG00000042564","Fam227a","4933432B09Rik","family with sequence similarity 227, member A","protein-coding"]
[4597,"chr2",90904306,90906229,"+",0,"NA","promoter-TSS (NM_026688)","promoter-TSS (NM_026688)",481,"NM_025991",67136,"Mm.330394","NM_025991","ENSMUSG00000005505","Kbtbd4","2510026C23Rik","kelch repeat and BTB (POZ) domain containing 4","protein-coding"]
[419,"chr1",171361453,171362445,"+",0,"NA","Intergenic","Intergenic",-1151,"NM_001033039",68874,"Mm.10756","NM_001033039","ENSMUSG00000045259","Klhdc9","1190002J23Rik|AA087357|ESTM31","kelch domain containing 9","protein-coding"]
[2015,"chr13",12519479,12520395,"+",0,"NA","exon (NM_133643, exon 1 of 6)","exon (NM_133643, exon 1 of 6)",513,"NM_133643",171211,"Mm.159671","NM_133643","ENSMUSG00000095105","Edaradd","1810032E07Rik|5830469M23Rik|A630043P06|cr","EDAR (ectodysplasin-A receptor)-associated death domain","protein-coding"]
[7073,"chr7",12924787,12928498,"+",0,"NA","promoter-TSS (NM_029809)","promoter-TSS (NM_029809)",-774,"NM_029809",381845,"Mm.439896","NM_029809","ENSMUSG00000033967","Rnf225","2310014L17Rik|AV237412|C77118","ring finger protein 225","protein-coding"]
[4521,"chr2",57181905,57182267,"+",0,"NA","promoter-TSS (NR_040356)","promoter-TSS (NR_040356)",255,"NR_040633",75279,"Mm.401987","NR_040633","ENSMUSG00000086396","4930555B11Rik","-","RIKEN cDNA 4930555B11 gene","ncRNA"]
[3208,"chr16",64770355,64771589,"+",0,"NA","promoter-TSS (NM_026273)","promoter-TSS (NM_026273)",-33,"NM_026273",67609,"Mm.212157","NM_026273","ENSMUSG00000059920","4930453N24Rik","AI649104","RIKEN cDNA 4930453N24 gene","protein-coding"]
[6836,"chr6",86626786,86631122,"+",0,"NA","exon (NM_026414, exon 1 of 1)","exon (NM_026414, exon 1 of 1)",780,"NM_026414",67855,"Mm.183043","NM_026414","ENSMUSG00000033508","Asprv1","2300003P22Rik|AA986851|SASP|SASPase|Taps","aspartic peptidase, retroviral-like 1","protein-coding"]
[3839,"chr18",36280406,36281670,"+",0,"NA","promoter-TSS (NM_008989)","promoter-TSS (NM_008989)",-124,"NM_008989",19290,"Mm.231802","NM_008989",null,"Pura","CAGER-1|Pur-alpha|ssCRE-BP","purine rich element binding protein A","protein-coding"]
[6706,"chr6",40470937,40471779,"+",0,"NA","promoter-TSS (NM_028358)","promoter-TSS (NM_028358)",-57,"NM_212468",381760,"Mm.276356","NM_028358","ENSMUSG00000029911","Ssbp1","2810480P10Rik|G630031O20Rik|MtSSB|mtDBP","single-stranded DNA binding protein 1","protein-coding"]
[8976,"chrX",164419852,164420431,"+",0,"NA","intron (NM_011081, intron 1 of 5)","intron (NM_011081, intron 1 of 5)",354,"NM_011081",18700,"Mm.3781","NM_011081","ENSMUSG00000031381","Piga","AI194334|Pig-a","phosphatidylinositol glycan anchor biosynthesis, class A","protein-coding"]
[6398,"chr5",121451857,121456176,"+",0,"NA","intron (NM_029912, intron 1 of 9)","intron (NM_029912, intron 1 of 9)",1307,"NM_029912",77462,"Mm.358781","NM_029912","ENSMUSG00000029452","Tmem116","4930406A18Rik|4930513P12Rik|C030022K24Rik","transmembrane protein 116","protein-coding"]
[2289,"chr13",100616216,100618619,"+",0,"NA","promoter-TSS (NM_178410)","promoter-TSS (NM_178410)",-446,"NM_001038602",218518,"Mm.25300","NM_178410","ENSMUSG00000021636","Marveld2","BC003296|MARVD2|Mrvldc2|Tric|Trica|Tricb|Tricc","MARVEL (membrane-associating) domain containing 2","protein-coding"]
[3283,"chr17",5491681,5493252,"+",0,"NA","promoter-TSS (NM_146073)","promoter-TSS (NM_146073)",-134,"NM_146073",224454,"Mm.487663","NM_146073","ENSMUSG00000034265","Zdhhc14","B530001K09Rik|New1cp","zinc finger, DHHC domain containing 14","protein-coding"]
[2312,"chr13",111488585,111490983,"+",0,"NA","5' UTR (NM_001122963, exon 1 of 12)","5' UTR (NM_001122963, exon 1 of 12)",257,"NM_028487",73274,"Mm.57286","NM_028487","ENSMUSG00000032745","Gpbp1","1700034P14Rik|AU019836|D230035M11Rik|Gpbp|mGPBP","GC-rich promoter binding protein 1","protein-coding"]
[3096,"chr16",22438822,22440669,"+",0,"NA","promoter-TSS (NM_023794)","promoter-TSS (NM_023794)",-175,"NM_023794",104156,"Mm.155708","NM_023794","ENSMUSG00000013089","Etv5","1110005E01Rik|8430401F14Rik|ERM","ets variant 5","protein-coding"]
[3637,"chr17",56218327,56219257,"+",0,"NA","promoter-TSS (NM_172624)","promoter-TSS (NM_172624)",97,"NM_172624",224897,"Mm.205535","NM_172624","ENSMUSG00000001229","Dpp9","6430584G11Rik|A330078I11|DPP IX|DPRP2","dipeptidylpeptidase 9","protein-coding"]
[1030,"chr11",23664830,23667258,"+",0,"NA","promoter-TSS (NM_023651)","promoter-TSS (NM_023651)",68,"NM_028304",74467,"Mm.29536","NM_028304","ENSMUSG00000020280","Pus10","2810013G11Rik|4933435A13Rik|AU014648|C77560|Ccdc139","pseudouridylate synthase 10","protein-coding"]
[365,"chr1",159231584,159232164,"+",0,"NA","promoter-TSS (NM_011931)","promoter-TSS (NM_011931)",-452,"NM_011931",26374,"Mm.328135","NM_011931","ENSMUSG00000040782","Rfwd2","AI316802|C80879|Cop1","ring finger and WD repeat domain 2","protein-coding"]
[2730,"chr15",58932921,58934213,"+",0,"NA","promoter-TSS (NM_023172)","promoter-TSS (NM_023172)",163,"NM_175151",69694,"Mm.383230","NM_175151","ENSMUSG00000050891","Tatdn1","2310079P03Rik|CDA11","TatD DNase domain containing 1","protein-coding"]
[3255,"chr16",92464616,92470781,"+",0,"NA","Intergenic","Intergenic",-1529,"NM_001081549",54720,"Mm.265744","NM_019466","ENSMUSG00000022951","Rcan1","Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1","regulator of calcineurin 1","protein-coding"]
[4632,"chr2",102899475,102901868,"+",0,"NA","intron (NM_001039150, intron 1 of 13)","intron (NM_001039150, intron 1 of 13)",994,"NM_001177785",12505,"Mm.423621","NM_009851","ENSMUSG00000005087","Cd44","AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1","CD44 antigen","protein-coding"]
[2021,"chr13",14629913,14630736,"+",0,"NA","promoter-TSS (NM_134067)","promoter-TSS (NM_134067)",66,"NM_134067",105351,"Mm.41450","NM_134067","ENSMUSG00000039182","AW209491","-","expressed sequence AW209491","protein-coding"]
[3430,"chr17",28690860,28693110,"+",0,"NA","promoter-TSS (NM_001168513)","promoter-TSS (NM_001168513)",-583,"NM_001168513",26416,"Mm.311337","NM_011951","ENSMUSG00000053436","Mapk14","CSBP2|Crk1|Csbp1|Mxi2|PRKM14|PRKM15|p38|p38-alpha|p38MAPK|p38a|p38alpha","mitogen-activated protein kinase 14","protein-coding"]
[4590,"chr2",84838087,84840607,"+",0,"NA","promoter-TSS (NM_001081349)","promoter-TSS (NM_001081349)",-61,"NM_001081349",72401,"Mm.22716","NM_024497","ENSMUSG00000027075","Slc43a1","2610016F07Rik|AA986141|Lat3|PB39|Pov1|R00504","solute carrier family 43, member 1","protein-coding"]
[3318,"chr17",21008611,21009863,"+",0,"NA","intron (NM_145483, intron 1 of 4)","CpG",296,"NM_145483",224585,"Mm.296036","NM_145483","ENSMUSG00000067942","Zfp160","6720480D16Rik|F11|HKr18|HZF5|KR18|mKIAA1611|mszf47","zinc finger protein 160","protein-coding"]
[5193,"chr3",90389599,90392878,"+",0,"NA","TTS (NM_178876)","TTS (NM_178876)",-1300,"NM_011988",26568,"Mm.45519","NM_011988","ENSMUSG00000027932","Slc27a3","Acsvl3|FATP-3|FATP3|Vlcs-3","solute carrier family 27 (fatty acid transporter), member 3","protein-coding"]
[570,"chr10",24149525,24149782,"+",0,"NA","5' UTR (NM_016797, exon 1 of 10)","5' UTR (NM_016797, exon 1 of 10)",336,"NM_016797",53331,"Mm.248042","NM_016797","ENSMUSG00000019998","Stx7","AI315064|AI317144|AW107239|Syn7","syntaxin 7","protein-coding"]
[8923,"chrX",134059319,134059933,"+",0,"NA","intron (NM_133196, intron 1 of 13)","CpG",450,"NM_133196",108062,"Mm.67938","NM_133196","ENSMUSG00000031256","Cstf2","C630034J23Rik|Cstf64|mir-3112","cleavage stimulation factor, 3' pre-RNA subunit 2","protein-coding"]
[3123,"chr16",32002447,32003788,"+",0,"NA","5' UTR (NM_177103, exon 1 of 10)","5' UTR (NM_177103, exon 1 of 10)",170,"NM_177103",320213,"Mm.152890","NM_023801",null,"Senp5","6230429P13Rik|A730063F07Rik|AI851888|BB189556|SMT3IP3","SUMO/sentrin specific peptidase 5","protein-coding"]
[5191,"chr3",90253881,90255245,"+",0,"NA","TTS (NM_013901)","TTS (NM_013901)",282,"NM_028881",74343,"Mm.35627","NM_028881","ENSMUSG00000027936","Crtc2","4632407F12Rik|Torc2|mTORC2","CREB regulated transcription coactivator 2","protein-coding"]
[3761,"chr18",10028897,10030666,"+",0,"NA","intron (NM_001038589, intron 1 of 14)","CpG",368,"NM_021522",59025,"Mm.329277","NM_021522","ENSMUSG00000047879","Usp14","2610005K12Rik|2610037B11Rik|AW107924|C78769|ax|nmf375","ubiquitin specific peptidase 14","protein-coding"]
[252,"chr1",105356073,105356618,"+",0,"NA","5' UTR (NM_178779, exon 1 of 3)","5' UTR (NM_178779, exon 1 of 3)",365,"NM_178779",320311,"Mm.389162","NM_178779","ENSMUSG00000047496","Rnf152","A930029B02Rik","ring finger protein 152","protein-coding"]
[6684,"chr6",34910120,34911255,"+",0,"NA","intron (NM_001013366, intron 1 of 14)","CpG",144,"NM_001013366",101240,"Mm.152120","NM_001013366","ENSMUSG00000058486","Wdr91","9530020G05Rik|AI987683|AU018665","WD repeat domain 91","protein-coding"]
[883,"chr10",120977729,120979820,"+",0,"NA","exon (NM_001081193, exon 1 of 13)","exon (NM_001081193, exon 1 of 13)",556,"NM_001081193",380664,"Mm.339371","NM_001081193","ENSMUSG00000048661","Lemd3","AI316861|Man1","LEM domain containing 3","protein-coding"]
[7864,"chr8",57511125,57512370,"+",0,"NA","promoter-TSS (NM_008252)","promoter-TSS (NM_008252)",-96,"NM_008252",97165,"Mm.276881","NM_008252","ENSMUSG00000054717","Hmgb2","C80539|HMG-2|Hmg2","high mobility group box 2","protein-coding"]
[4610,"chr2",91709493,91712969,"+",0,"NA","promoter-TSS (NM_145528)","promoter-TSS (NM_145528)",281,"NM_178724",241547,"Mm.130331","NM_178724","ENSMUSG00000027243","Harbi1","D230010M03Rik","harbinger transposase derived 1","protein-coding"]
[6058,"chr5",8995928,8997631,"+",0,"NA","intron (NM_023733, intron 1 of 17)","intron (NM_023733, intron 1 of 17)",367,"NM_023733",74114,"Mm.28197","NM_023733","ENSMUSG00000003623","Crot","1200003H03Rik","carnitine O-octanoyltransferase","protein-coding"]
[6667,"chr6",30173215,30175138,"+",0,"NA","promoter-TSS (NR_126541)","promoter-TSS (NR_126541)",-51,"NR_126541",101447999,null,"NR_126540",null,"Mirc35hg","-","microRNA cluster 35, host gene","ncRNA"]
[6199,"chr5",64092636,64093596,"+",0,"NA","intron (NM_025700, intron 1 of 13)","CpG",166,"NM_025700",66681,"Mm.2325","NM_025700","ENSMUSG00000029171","Pgm1","3230402E02Rik|Pgm-1|Pgm2","phosphoglucomutase 1","protein-coding"]
[3825,"chr18",34624151,34624834,"+",0,"NA","promoter-TSS (NM_001166406)","promoter-TSS (NM_001166406)",-132,"NM_001166407",19348,"Mm.258846","NM_009004","ENSMUSG00000003779","Kif20a","AA415432|Rab6kifl","kinesin family member 20A","protein-coding"]
[3618,"chr17",48039701,48040268,"+",0,"NA","Intergenic","RSINE1|SINE|B4",-1691,"NM_029689",76651,"Mm.76918","NM_029689","ENSMUSG00000094928","1700122O11Rik","-","RIKEN cDNA 1700122O11 gene","protein-coding"]
[3275,"chr16",97850613,97852909,"+",0,"NA","promoter-TSS (NM_144789)","promoter-TSS (NM_144789)",-534,"NM_144789",114604,"Mm.328741","NM_144789","ENSMUSG00000014039","Prdm15","C21orf83|E130018M06Rik|ORF62|Zfp298","PR domain containing 15","protein-coding"]
[2463,"chr14",54253261,54255479,"+",0,"NA","promoter-TSS (NM_001113358)","promoter-TSS (NM_001113358)",241,"NM_001205181",105501,"Mm.28771","NM_134076","ENSMUSG00000040997","Abhd4","1110035H23Rik|AI429574|Abh4","abhydrolase domain containing 4","protein-coding"]
[2493,"chr14",55659922,55660381,"+",0,"NA","non-coding (NR_028316, exon 2 of 5)","non-coding (NR_028316, exon 2 of 5)",357,"NM_023397",67881,"Mm.24601","NM_023397","ENSMUSG00000002329","Mdp1","1810034K20Rik|AI035604","magnesium-dependent phosphatase 1","protein-coding"]
[105,"chr1",55051573,55053687,"+",0,"NA","promoter-TSS (NM_001039710)","promoter-TSS (NM_001039710)",-140,"NM_026424",67876,"Mm.281019","NM_026424","ENSMUSG00000025981","Coq10b","1500041J02Rik|1700030I21Rik|9530077A17Rik|AV002237|AW742641","coenzyme Q10 homolog B (S. cerevisiae)","protein-coding"]
[8330,"chr9",36726368,36727446,"+",0,"NA","promoter-TSS (NM_007691)","promoter-TSS (NM_007691)",-249,"NM_007691",12649,"Mm.16753","NM_007691","ENSMUSG00000032113","Chek1","C85740|Chk1|rad27","checkpoint kinase 1","protein-coding"]
[5976,"chr4",149166000,149167507,"+",0,"NA","promoter-TSS (NM_001081274)","promoter-TSS (NM_001081274)",-46,"NM_001081274",110208,"Mm.252080","NM_025801","ENSMUSG00000028961","Pgd","0610042A05Rik|AU019875|C78335","phosphogluconate dehydrogenase","protein-coding"]
[6532,"chr5",138255104,138256157,"+",0,"NA","5' UTR (NM_001081108, exon 1 of 4)","5' UTR (NM_001081108, exon 1 of 4)",148,"NM_001081108",66096,"Mm.206901","NM_001081108","ENSMUSG00000050552","Lamtor4","0910001L09Rik|AV006840","late endosomal/lysosomal adaptor, MAPK and MTOR activator 4","protein-coding"]
[4500,"chr2",37442737,37443908,"+",0,"NA","promoter-TSS (NM_199025)","promoter-TSS (NM_199025)",37,"NM_146121",227800,"Mm.383192","NM_146121","ENSMUSG00000035437","Rabgap1","Gapcena|mKIAA4104","RAB GTPase activating protein 1","protein-coding"]
[2380,"chr14",26579318,26580547,"+",0,"NA","intron (NM_001134465, intron 1 of 19)","CpG",382,"NM_145969",211922,"Mm.260512","NM_145969","ENSMUSG00000040818","Dennd6a","Fam116a","DENN/MADD domain containing 6A","protein-coding"]
[3549,"chr17",35994283,35995098,"+",0,"NA","intron (NR_015618, intron 1 of 1)","intron (NR_015618, intron 1 of 1)",186,"NR_015618",77810,"Mm.483143","NR_015618",null,"A930015D03Rik","-","RIKEN cDNA A930015D03 gene","ncRNA"]
[408,"chr1",170866710,170868585,"+",0,"NA","intron (NM_001081304, intron 1 of 15)","CpG",124,"NM_001081304",226641,"Mm.377046","NM_001081304","ENSMUSG00000026663","Atf6","9130025P16Rik|9630036G24|AA789574|Atf6alpha|ESTM49","activating transcription factor 6","protein-coding"]
[5410,"chr3",152209145,152212267,"+",0,"NA","promoter-TSS (NM_027287)","promoter-TSS (NM_027287)",248,"NM_057172",51886,"Mm.278922","NM_057172","ENSMUSG00000028034","Fubp1","9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4","far upstream element (FUSE) binding protein 1","protein-coding"]
[7241,"chr7",30972000,30974504,"+",0,"NA","promoter-TSS (NR_038860)","promoter-TSS (NR_038860)",217,"NM_001164185",54135,"Mm.4067","NM_017405","ENSMUSG00000001247","Lsr","ILDR3|Lisch7","lipolysis stimulated lipoprotein receptor","protein-coding"]
[7527,"chr7",112224912,112227757,"+",0,"NA","intron (NM_001193305, intron 1 of 25)","intron (NM_001193305, intron 1 of 25)",498,"NM_001193305",320878,"Mm.52312","NM_177282","ENSMUSG00000038244","Mical2","5330438E18Rik|9530064J02|MICAL-2|mKIAA0750","microtubule associated monooxygenase, calponin and LIM domain containing 2","protein-coding"]
[7434,"chr7",90456526,90457083,"+",0,"NA","intron (NM_025460, intron 1 of 4)","intron (NM_025460, intron 1 of 4)",404,"NM_025460",66271,"Mm.28963","NM_025460","ENSMUSG00000030615","Tmem126a","1810020E01Rik","transmembrane protein 126A","protein-coding"]
[2777,"chr15",76269320,76269854,"+",0,"NA","intron (NR_045747, intron 1 of 2)","intron (NR_045747, intron 1 of 2)",252,"NR_045747",100038659,"Mm.448549","NR_045747",null,"Mirt2","ENSMUSG00000075583|Gm10872|Gm24562","myocardial infraction associated transcript 2","ncRNA"]
[3601,"chr17",46751617,46752122,"+",0,"NA","intron (NM_028065, intron 1 of 5)","intron (NM_028065, intron 1 of 5)",345,"NM_001305989",72029,"Mm.240325","NM_028065","ENSMUSG00000023973","Cnpy3","1600025D17Rik|2410050O22Rik|AI413153|CAG4A|ERDA5|PRAT4A|Tnrc5","canopy 3 homolog (zebrafish)","protein-coding"]
[8912,"chrX",105079373,105080340,"+",0,"NA","promoter-TSS (NM_026312)","promoter-TSS (NM_026312)",100,"NM_026312",67683,"Mm.273405","NM_026312","ENSMUSG00000031226","Pbdc1","2610029G23Rik","polysaccharide biosynthesis domain containing 1","protein-coding"]
[5301,"chr3",107877135,107879026,"+",0,"NA","intron (NM_133867, intron 1 of 18)","intron (NM_133867, intron 1 of 18)",850,"NM_133867",99662,"Mm.108491","NM_133867","ENSMUSG00000040600","Eps8l3","AI504489|Eps8r3","EPS8-like 3","protein-coding"]
[8867,"chrX",74328784,74329023,"+",0,"NA","promoter-TSS (NM_008883)","promoter-TSS (NM_008883)",-163,"NM_008883",18846,"Mm.1685","NM_008883","ENSMUSG00000031398","Plxna3","PlexA3|Plxa3|Plxn3|Plxn4|SEX|mKIAA4078","plexin A3","protein-coding"]
[4956,"chr2",169633280,169634163,"+",0,"NA","promoter-TSS (NM_080455)","promoter-TSS (NM_080455)",75,"NM_080455",228911,"Mm.315789","NM_080455","ENSMUSG00000047907","Tshz2","2900073F20Rik|B830045G17|Mtsh2|Sdccag33l|Tsh2|Zfp218|mKIAA4248|teashirt2","teashirt zinc finger family member 2","protein-coding"]
[7049,"chr7",4788402,4790112,"+",0,"NA","exon (NM_029384, exon 1 of 2)","exon (NM_029384, exon 1 of 2)",303,"NM_029384",664968,"Mm.292837","NM_029384",null,"Tmem238","2210411K11Rik","transmembrane protein 238","protein-coding"]
[6458,"chr5",129669741,129669915,"+",0,"NA","intron (NM_172462, intron 1 of 2)","intron (NM_172462, intron 1 of 2)",260,"NM_172462",22648,"Mm.135067","NM_172462","ENSMUSG00000051034","Zfp11","6720465D24|Krox-6|Zfp-11","zinc finger protein 11","protein-coding"]
[3808,"chr18",31950582,31951299,"+",0,"NA","intron (NM_144862, intron 4 of 9)","intron (NM_144862, intron 4 of 9)",-1304,"NM_001025381",574402,"Mm.391108","NM_001025381","ENSMUSG00000052229","Gpr17","AI853548","G protein-coupled receptor 17","protein-coding"]
[2307,"chr13",107888873,107891449,"+",0,"NA","promoter-TSS (NM_145456)","promoter-TSS (NM_145456)",-97,"NM_145456",67263,"Mm.490418","NM_145456","ENSMUSG00000032846","Zswim6","2900036G02Rik|mKIAA1577","zinc finger SWIM-type containing 6","protein-coding"]
[7039,"chr7",3703284,3704871,"+",0,"NA","promoter-TSS (NM_029767)","promoter-TSS (NM_029767)",36,"NM_029767",76846,"Mm.13944","NM_029767","ENSMUSG00000006333","Rps9","3010033P07Rik|AL022771|AL022885","ribosomal protein S9","protein-coding"]
[2706,"chr15",50889333,50890025,"+",0,"NA","promoter-TSS (NR_035444)","promoter-TSS (NR_035444)",362,"NM_032000",83925,"Mm.30466","NM_032000","ENSMUSG00000038679","Trps1","AI115454|AI447310|D15Ertd586e","trichorhinophalangeal syndrome I (human)","protein-coding"]
[6609,"chr5",149005592,149008516,"+",0,"NA","promoter-TSS (NR_040429)","promoter-TSS (NR_040429)",92,"NR_040429",100503307,"Mm.188008","NR_040429","ENSMUSG00000086610","Gm15408","OTTMUSG00000021225","predicted gene 15408","ncRNA"]
[7826,"chr8",35586527,35589119,"+",0,"NA","promoter-TSS (NM_001081279)","promoter-TSS (NM_001081279)",25,"NM_001081279",52065,"Mm.103246","NM_001081279","ENSMUSG00000070056","Mfhas1","2310066G09Rik|D8Ertd91e","malignant fibrous histiocytoma amplified sequence 1","protein-coding"]
[5973,"chr4",149098832,149100281,"+",0,"NA","intron (NM_019781, intron 1 of 8)","CpG",256,"NM_019781",56273,"Mm.184172","NM_019781","ENSMUSG00000028975","Pex14","Pex14p|R75137","peroxisomal biogenesis factor 14","protein-coding"]
[8546,"chr9",79759253,79760496,"+",0,"NA","promoter-TSS (NM_009945)","promoter-TSS (NM_009945)",-21,"NM_009945",12866,"Mm.152627","NM_009945","ENSMUSG00000032330","Cox7a2","COX7AL|Cox7a3|CoxVIIa-L","cytochrome c oxidase subunit VIIa 2","protein-coding"]
[8736,"chr9",122350186,122354061,"+",0,"NA","intron (NM_026179, intron 1 of 6)","CpG",507,"NM_026179",67469,"Mm.280254","NM_026179","ENSMUSG00000032540","Abhd5","1300003D03Rik|2010002J10Rik|CDS|CGI-58|IECN5|NCIE2","abhydrolase domain containing 5","protein-coding"]
[5444,"chr4",11484926,11486398,"+",0,"NA","promoter-TSS (NM_001081183)","promoter-TSS (NM_001081183)",-296,"NM_001081183",66185,"Mm.331487","NM_001081183","ENSMUSG00000040720","1110037F02Rik","4930422M05Rik|Kiaa1429|mKIAA1429","RIKEN cDNA 1110037F02 gene","protein-coding"]
[5502,"chr4",41313232,41316293,"+",0,"NA","5' UTR (NM_026893, exon 1 of 9)","5' UTR (NM_026893, exon 1 of 9)",139,"NM_026893",68970,"Mm.28891","NM_026893","ENSMUSG00000028436","Dcaf12","1500001L20Rik|5830424K06Rik|AA420338|AI851081|Wdr40a","DDB1 and CUL4 associated factor 12","protein-coding"]
[2133,"chr13",51098843,51101924,"+",0,"NA","promoter-TSS (NM_001283030)","promoter-TSS (NM_001283030)",344,"NR_029463",77428,"Mm.405630","NR_029463",null,"9430083A17Rik","-","RIKEN cDNA 9430083A17 gene","ncRNA"]
[8118,"chr8",107047799,107049029,"+",0,"NA","TTS (NM_139229)","TTS (NM_139229)",200,"NM_026513",68023,"Mm.482335","NM_026513","ENSMUSG00000078931","Pdf","2610019N19Rik","peptide deformylase (mitochondrial)","protein-coding"]
[8312,"chr9",22474932,22476195,"+",0,"NA","promoter-TSS (NM_178415)","promoter-TSS (NM_178415)",-152,"NM_181316",319845,"Mm.176725","NM_178415","ENSMUSG00000035919","Bbs9","E130103I17Rik","Bardet-Biedl syndrome 9 (human)","protein-coding"]
[4969,"chr2",174326949,174328104,"+",0,"NA","promoter-TSS (NR_003258)","promoter-TSS (NR_003258)",-242,"NM_001310083",14683,"Mm.125770","NM_010309","ENSMUSG00000027523","Gnas","5530400H20Rik|A930027G11Rik|C130027O20Rik|GPSA|GSP|Galphas|Gnas1|Gnasxl|Gs-alpha|Gsa|Nesp|Nesp55|Nespl|Oed-Sml|Oedsml|P1|P2|P3|PHP1A|PHP1B|POH|SCG6","GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus","protein-coding"]
[6529,"chr5",138170539,138172391,"+",0,"NA","promoter-TSS (NM_021392)","promoter-TSS (NM_021392)",397,"NM_008568",17220,"Mm.378965","NM_008568","ENSMUSG00000029730","Mcm7","AI747533|Mcmd7|mCDC47","minichromosome maintenance deficient 7 (S. cerevisiae)","protein-coding"]
[4722,"chr2",121456179,121458230,"+",0,"NA","promoter-TSS (NM_001025371)","promoter-TSS (NM_001025371)",116,"NM_026318",67693,"Mm.330525","NM_026318",null,"Hypk","2310003F16Rik|HSPC136","huntingtin interacting protein K","protein-coding"]
[8337,"chr9",37656393,37657791,"+",0,"NA","exon (NM_025289, exon 1 of 9)","exon (NM_025289, exon 1 of 9)",220,"NM_025289",21376,"Mm.28689","NM_025289","ENSMUSG00000011114","Tbrg1","AA408552|AA409675|Niam|Tb-5|mFLJ00213","transforming growth factor beta regulated gene 1","protein-coding"]
[431,"chr1",172499128,172503914,"+",0,"NA","intron (NM_178598, intron 1 of 4)","intron (NM_178598, intron 1 of 4)",1275,"NM_178598",21346,"Mm.271711","NM_178598","ENSMUSG00000026547","Tagln2","2700094C18Rik|SM22beta|Sm22B|Sm22a","transgelin 2","protein-coding"]
[7191,"chr7",28337814,28339362,"+",0,"NA","intron (NM_013676, intron 1 of 29)","CpG-12904",131,"NM_013676",20924,"Mm.285906","NM_013676","ENSMUSG00000003435","Supt5","AL033283|AL033321|AU019549|Spt5|Supt5h","suppressor of Ty 5","protein-coding"]
[3487,"chr17",33939015,33941149,"+",0,"NA","promoter-TSS (NM_020603)","promoter-TSS (NM_020603)",248,"NM_001185182",14976,"Mm.2948","NM_010385","ENSMUSG00000024309","Pfdn6","H-2Ke2|H2-Ke2|Ke-2","prefoldin subunit 6","protein-coding"]
[7134,"chr7",24133683,24134482,"+",0,"NA","promoter-TSS (NM_019941)","promoter-TSS (NM_019941)",-81,"NM_019941",56525,"Mm.295595","NM_019941",null,"Zfp235","0610030O19Rik|AI428448","zinc finger protein 235","protein-coding"]
[4729,"chr2",122630682,122632054,"+",0,"NA","exon (NM_001033256, exon 1 of 2)","exon (NM_001033256, exon 1 of 2)",743,"NM_001033256",214616,"Mm.271306","NM_001033256",null,"Spata5l1","AV141009|C130039A10Rik","spermatogenesis associated 5-like 1","protein-coding"]
[4329,"chr2",11171965,11172937,"+",0,"NA","promoter-TSS (NM_008859)","promoter-TSS (NM_008859)",69,"NM_008859",18761,"Mm.329993","NM_008859","ENSMUSG00000026778","Prkcq","A130035A12Rik|AW494342|PKC-0|PKC-theta|PKCtheta|Pkcq","protein kinase C, theta","protein-coding"]
[129,"chr1",59684414,59686362,"+",0,"NA","intron (NM_018868, intron 1 of 14)","intron (NM_018868, intron 1 of 14)",382,"NM_018868",55989,"Mm.220367","NM_018868","ENSMUSG00000026020","Nop58","MSSP|Nol5|SIK|nop5","NOP58 ribonucleoprotein","protein-coding"]
[6077,"chr5",23843650,23844727,"+",0,"NA","promoter-TSS (NM_025394)","promoter-TSS (NM_025394)",-43,"NM_025394",66169,"Mm.291868","NM_025394","ENSMUSG00000028998","Tomm7","1110020J08Rik|AW047273|Tom7","translocase of outer mitochondrial membrane 7 homolog (yeast)","protein-coding"]
[4662,"chr2",112492138,112494430,"+",0,"NA","intron (NM_028844, intron 1 of 5)","CpG",320,"NM_028844",74268,"Mm.315125","NM_028844",null,"Aven","1700013A01Rik|1700056A21Rik|mAven-L|mAven-S","apoptosis, caspase activation inhibitor","protein-coding"]
[6033,"chr4",155961085,155963001,"+",0,"NA","promoter-TSS (NM_026125)","promoter-TSS (NM_026125)",-269,"NM_026125",67389,"Mm.29140","NM_026125","ENSMUSG00000023571","Fam132a","1110035L05Rik|C1qdc2|CTRP12|alipolin","family with sequence similarity 132, member A","protein-coding"]
[926,"chr10",128322411,128324202,"+",0,"NA","intron (NM_019953, intron 1 of 5)","intron (NM_019953, intron 1 of 5)",847,"NM_019953",56530,"Mm.44220","NM_019953","ENSMUSG00000025381","Cnpy2","5330432A10Rik|AW229003|D10Bwg1546e|Tmem4|Zsig9","canopy 2 homolog (zebrafish)","protein-coding"]
[1083,"chr11",50024994,50025746,"+",0,"NA","promoter-TSS (NM_001290750)","promoter-TSS (NM_001290750)",39,"NM_001290750",59044,"Mm.359004","NM_021540","ENSMUSG00000020376","Rnf130","2510042A13Rik|G1RZFP|G1rp|GOLIATH|GP","ring finger protein 130","protein-coding"]
[6137,"chr5",33628853,33631635,"+",0,"NA","promoter-TSS (NM_178390)","promoter-TSS (NM_178390)",-609,"NM_178390",74504,"Mm.294695","NM_178390","ENSMUSG00000037339","Fam53a","2410018C17Rik|5430419M09Rik|Dntnp","family with sequence similarity 53, member A","protein-coding"]
[3024,"chr16",13108875,13110683,"+",0,"NA","promoter-TSS (NM_015769)","promoter-TSS (NM_015769)",43,"NM_015769",50505,"Mm.287837","NM_015769",null,"Ercc4","AI606920|Xpf","excision repair cross-complementing rodent repair deficiency, complementation group 4","protein-coding"]
[1792,"chr12",55396874,55400240,"+",0,"NA","promoter-TSS (NM_011968)","promoter-TSS (NM_011968)",-268,"NM_011968",26443,"Mm.30210","NM_011968","ENSMUSG00000021024","Psma6","IOTA","proteasome (prosome, macropain) subunit, alpha type 6","protein-coding"]
[8894,"chrX",99470137,99470601,"+",0,"NA","intron (NM_001290555, intron 1 of 1)","intron (NM_001290555, intron 1 of 1)",366,"NM_001083110",18744,"Mm.8211","NM_008853","ENSMUSG00000034403","Pja1","praja-1","praja ring finger 1, E3 ubiquitin protein ligase","protein-coding"]
[662,"chr10",61679005,61681610,"+",0,"NA","promoter-TSS (NR_126477)","promoter-TSS (NR_126477)",-14,"NM_009120",20224,"Mm.391794","NM_009120","ENSMUSG00000020088","Sar1a","1600019H17Rik|Sara|Sara1","SAR1 gene homolog A (S. cerevisiae)","protein-coding"]
[168,"chr1",74587264,74589384,"+",0,"NA","promoter-TSS (NM_025784)","promoter-TSS (NM_025784)",35,"NM_025784",66821,"Mm.358700","NM_025784","ENSMUSG00000026172","Bcs1l","9130022O19Rik","BCS1-like (yeast)","protein-coding"]
[6180,"chr5",45668799,45670281,"+",0,"NA","promoter-TSS (NM_019438)","promoter-TSS (NM_019438)",168,"NR_073433",69788,"Mm.381492","NR_073433","ENSMUSG00000104986","1600023N17Rik","AV119442","RIKEN cDNA 1600023N17 gene","ncRNA"]
[3447,"chr17",30575305,30577289,"+",0,"NA","promoter-TSS (NM_027060)","promoter-TSS (NM_027060)",-10,"NM_027060",224671,"Mm.41220","NM_027060","ENSMUSG00000062202","Btbd9","1700023F20Rik|4930402L05|AI464421","BTB (POZ) domain containing 9","protein-coding"]
[8007,"chr8",84902590,84903819,"+",0,"NA","exon (NM_010635, exon 2 of 3)","exon (NM_010635, exon 2 of 3)",1276,"NM_010635",16596,"Mm.4847","NM_010635","ENSMUSG00000054191","Klf1","Eklf|Nan","Kruppel-like factor 1 (erythroid)","protein-coding"]
[3156,"chr16",37867694,37870251,"+",0,"NA","exon (NM_177093, exon 1 of 4)","exon (NM_177093, exon 1 of 4)",572,"NM_177093",320184,"Mm.390882","NM_177093","ENSMUSG00000034158","Lrrc58","1810012N18Rik|C330018J07Rik","leucine rich repeat containing 58","protein-coding"]
[2728,"chr15",58872142,58873384,"+",0,"NA","exon (NM_026642, exon 1 of 1)","exon (NM_026642, exon 1 of 1)",114,"NM_026642",68260,"Mm.278805","NM_026642","ENSMUSG00000037085","Trmt12","4632406N01Rik|AI449275|Tyw2","tRNA methyltranferase 12","protein-coding"]
[8594,"chr9",100480853,100490112,"+",0,"NA","intron (NM_001033543, intron 1 of 6)","intron (NM_001033543, intron 1 of 6)",991,"NM_001033543",213208,"Mm.242896","NM_001033543","ENSMUSG00000044244","Il20rb","AV228068|Fndc6|Gm186|Il20R2","interleukin 20 receptor beta","protein-coding"]
[3992,"chr19",4096438,4100227,"+",0,"NA","intron (NM_026373, intron 3 of 3)","intron (NM_026373, intron 3 of 3)",981,"NM_026373",52004,"Mm.29609","NM_026373","ENSMUSG00000024856","Cdk2ap2","5830466O21Rik|D19Ertd144e|Doc-1r","CDK2-associated protein 2","protein-coding"]
[3439,"chr17",29263659,29264650,"+",0,"NA","promoter-TSS (NM_026845)","promoter-TSS (NM_026845)",-183,"NM_026845",68816,"Mm.328928","NM_026845","ENSMUSG00000024007","Ppil1","1110060O10Rik|AI327391|Cypl1","peptidylprolyl isomerase (cyclophilin)-like 1","protein-coding"]
[124,"chr1",59119855,59120502,"+",0,"NA","promoter-TSS (NM_001037812)","promoter-TSS (NM_001037812)",-82,"NM_001033449",381259,"Mm.261275","NM_001033449","ENSMUSG00000038079","Tmem237","AI853305|Als2cr4|Gm972","transmembrane protein 237","protein-coding"]
[1429,"chr11",96351327,96353612,"+",0,"NA","intron (NM_134032, intron 1 of 1)","intron (NM_134032, intron 1 of 1)",837,"NM_134032",103889,"Mm.281153","NM_134032","ENSMUSG00000075588","Hoxb2","AI894218|Hox-2.8|Hoxbes2","homeobox B2","protein-coding"]
[4259,"chr19",46338432,46339031,"+",0,"NA","promoter-TSS (NM_001164292)","promoter-TSS (NM_001164292)",-71,"NM_001164292",67116,"Mm.218848","NM_024192","ENSMUSG00000036748","Cuedc2","3010002G01Rik","CUE domain containing 2","protein-coding"]
[2536,"chr14",63943086,63944283,"+",0,"NA","promoter-TSS (NM_011446)","promoter-TSS (NM_011446)",-22,"NM_011446",20680,"Mm.42162","NM_011446","ENSMUSG00000063060","Sox7","-","SRY (sex determining region Y)-box 7","protein-coding"]
[5856,"chr4",133369805,133373004,"+",0,"NA","intron (NM_016981, intron 1 of 11)","intron (NM_016981, intron 1 of 11)",1628,"NR_039582",100628620,null,"NR_039582","ENSMUSG00000092745","Mir5122","mmu-mir-5122|mu-mir-5122","microRNA 5122","ncRNA"]
[4988,"chr2",180920208,180921471,"+",0,"NA","promoter-TSS (NM_173761)","promoter-TSS (NM_173761)",97,"NM_173761",228994,"Mm.30205","NM_173761","ENSMUSG00000038848","Ythdf1","2210410K23Rik|8030473O16","YTH domain family 1","protein-coding"]
[6875,"chr6",97209529,97212461,"+",0,"NA","exon (NM_022992, exon 1 of 3)","exon (NM_022992, exon 1 of 3)",203,"NM_022992",65106,"Mm.291014","NM_022992","ENSMUSG00000035199","Arl6ip5","5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin","ADP-ribosylation factor-like 6 interacting protein 5","protein-coding"]
[3611,"chr17",47610609,47612252,"+",0,"NA","promoter-TSS (NM_020048)","promoter-TSS (NM_020048)",62,"NM_016859",53414,"Mm.472101","NM_016859","ENSMUSG00000023988","Bysl","Bys|Enp1","bystin-like","protein-coding"]
[2483,"chr14",55094387,55095342,"+",0,"NA","promoter-TSS (NM_153083)","promoter-TSS (NM_153083)",80,"NM_153083",105663,"Mm.319204","NM_153083","ENSMUSG00000045691","Thtpa","AW122966","thiamine triphosphatase","protein-coding"]
[6098,"chr5",29377141,29378990,"+",0,"NA","intron (NM_020295, intron 1 of 16)","CpG",325,"NM_020295",56873,"Mm.41572","NM_020295","ENSMUSG00000010721","Lmbr1","1110048D14Rik|AU017641","limb region 1","protein-coding"]
[8202,"chr8",123039793,123043610,"+",0,"NA","promoter-TSS (NR_045268)","promoter-TSS (NR_045268)",583,"NR_037865",77087,"Mm.31567","NM_001081379","ENSMUSG00000035569","Ankrd11","2410104C19Rik|3010027A04Rik|6330578C09Rik|9530048I21Rik|AA930108|Gm176|Yod","ankyrin repeat domain 11","protein-coding"]
[6679,"chr6",34353701,34354809,"+",0,"NA","promoter-TSS (NM_008012)","promoter-TSS (NM_008012)",91,"NM_008012",14187,"Mm.5378","NM_008012","ENSMUSG00000029762","Akr1b8","FR-1|Fgfrp|Fgrp","aldo-keto reductase family 1, member B8","protein-coding"]
[2259,"chr13",93191481,93192901,"+",0,"NA","promoter-TSS (NM_133905)","promoter-TSS (NM_133905)",92,"NM_133905",100715,"Mm.242865","NM_133905","ENSMUSG00000042167","Papd4","8030446C20Rik|AI649009|GLD-2|Gld2","PAP associated domain containing 4","protein-coding"]
[7694,"chr7",141337358,141340729,"+",0,"NA","promoter-TSS (NM_133191)","promoter-TSS (NM_133191)",41,"NM_133191",98845,"Mm.27451","NM_133191","ENSMUSG00000025504","Eps8l2","AI042819|AW545405|Eps8r2","EPS8-like 2","protein-coding"]
[2212,"chr13",67813860,67814509,"+",0,"NA","intron (NM_198322, intron 1 of 3)","intron (NM_198322, intron 1 of 3)",368,"NM_198322",212569,"Mm.358842","NM_198322","ENSMUSG00000030446","Zfp273","6820416H06Rik|Rslcan1","zinc finger protein 273","protein-coding"]
[6694,"chr6",38432578,38435723,"+",0,"NA","5' UTR (NM_177185, exon 1 of 17)","5' UTR (NM_177185, exon 1 of 17)",225,"NM_177185",320538,"Mm.302831","NM_177185","ENSMUSG00000038538","Ubn2","2900060J04Rik|6030408G03Rik|BC060116|D130059P03Rik|mKIAA2030","ubinuclein 2","protein-coding"]
[1886,"chr12",83687630,83690085,"+",0,"NA","5' UTR (NM_008943, exon 1 of 12)","5' UTR (NM_008943, exon 1 of 12)",294,"NM_008943",19164,"Mm.998","NM_008943","ENSMUSG00000019969","Psen1","Ad3h|PS-1|PS1|S182","presenilin 1","protein-coding"]
[7222,"chr7",30184327,30184484,"+",0,"NA","intron (NM_009944, intron 1 of 3)","intron (NM_009944, intron 1 of 3)",234,"NM_009944",12865,"Mm.423030","NM_009944","ENSMUSG00000074218","Cox7a1","COX7A|COX7AH|COX7AM","cytochrome c oxidase subunit VIIa 1","protein-coding"]
[940,"chr10",128704083,128705593,"+",0,"NA","5' UTR (NM_016756, exon 1 of 7)","5' UTR (NM_016756, exon 1 of 7)",213,"NM_183417",12566,"Mm.111326","NM_016756","ENSMUSG00000025358","Cdk2","A630093N05Rik","cyclin-dependent kinase 2","protein-coding"]
[685,"chr10",69212201,69214520,"+",0,"NA","5' UTR (NM_001252638, exon 1 of 12)","5' UTR (NM_001252638, exon 1 of 12)",166,"NM_001252638",69288,"Mm.26659","NM_001081347","ENSMUSG00000019944","Rhobtb1","1700008H16Rik|3110048G13Rik|AI173445|AI573858|AV350930","Rho-related BTB domain containing 1","protein-coding"]
[5313,"chr3",108554125,108555169,"+",0,"NA","promoter-TSS (NR_028538)","promoter-TSS (NR_028538)",-245,"NR_028538",100217438,null,"NR_028538",null,"Scarna2","MBII-382","small Cajal body-specific RNA 2","ncRNA"]
[7809,"chr8",27128020,27129154,"+",0,"NA","promoter-TSS (NM_025686)","promoter-TSS (NM_025686)",45,"NM_025686",66653,"Mm.334467","NM_025686","ENSMUSG00000031487","Brf2","2700059M06Rik|5730512K07Rik|AU018504|AU022602|BRFU|TFIIIB50","BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like","protein-coding"]
[4360,"chr2",23571432,23572028,"+",0,"NA","intron (NM_001165997, intron 1 of 11)","CpG",374,"NM_029773",76857,"Mm.276415","NM_029773","ENSMUSG00000026771","Spopl","4921517N04Rik|AU014935|BB233739|E430033K04Rik","speckle-type POZ protein-like","protein-coding"]
[3823,"chr18",34375104,34375375,"+",0,"NA","Intergenic","B4A|SINE|B4",-1824,"NM_007874",13476,"Mm.280075","NM_007874","ENSMUSG00000005873","Reep5","AI324241|AU022809|AW495741|DP1/TB2|Dp1|R74856|TB2/DP1","receptor accessory protein 5","protein-coding"]
[2377,"chr14",25693576,25696108,"+",0,"NA","intron (NM_134084, intron 1 of 5)","intron (NM_134084, intron 1 of 5)",672,"NM_134084",105675,"Mm.41656","NM_134084","ENSMUSG00000021868","Ppif","AW457192|CyP-D|CyP-F|CypD|PPIase","peptidylprolyl isomerase F (cyclophilin F)","protein-coding"]
[3975,"chr18",84684819,84686053,"+",0,"NA","intron (NM_023149, intron 1 of 11)","CpG",266,"NM_023149",66054,"Mm.29646","NM_023149","ENSMUSG00000024644","Cndp2","0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1","CNDP dipeptidase 2 (metallopeptidase M20 family)","protein-coding"]
[8198,"chr8",122549458,122551708,"+",0,"NA","intron (NM_001037298, intron 1 of 50)","intron (NM_001037298, intron 1 of 50)",746,"NM_001037298",234839,"Mm.37324","NM_001037298","ENSMUSG00000014444","Piezo1","9630020g22|Fam38a|mKIAA0233","piezo-type mechanosensitive ion channel component 1","protein-coding"]
[2500,"chr14",55885020,55886303,"+",0,"NA","intron (NM_027143, intron 1 of 7)","intron (NM_027143, intron 1 of 7)",692,"NM_027143",219094,"Mm.37592","NM_027143","ENSMUSG00000047153","Khnyn","6330555F21|9130227C08Rik|AI605259|Kiaa0323|mKIAA0323","KH and NYN domain containing","protein-coding"]
[3937,"chr18",70051335,70053828,"+",0,"NA","intron (NM_001302798, intron 1 of 6)","intron (NM_001302798, intron 1 of 6)",1007,"NM_001302798",80718,"Mm.246753","NM_030554","ENSMUSG00000024511","Rab27b","2310021G14Rik|B130064M09Rik","RAB27B, member RAS oncogene family","protein-coding"]
[3162,"chr16",38548715,38550118,"+",0,"NA","exon (NM_172380, exon 2 of 11)","exon (NM_172380, exon 2 of 11)",840,"NM_172380",224143,"Mm.284366","NM_172380","ENSMUSG00000034064","Poglut1","9630046K23Rik|Clp46|Ktelc1|Rumi","protein O-glucosyltransferase 1","protein-coding"]
[3895,"chr18",57877690,57880224,"+",0,"NA","exon (NM_009194, exon 1 of 27)","exon (NM_009194, exon 1 of 27)",279,"NM_009194",20496,"Mm.399997","NM_009194","ENSMUSG00000024597","Slc12a2","9330166H04Rik|Nkcc1|mBSC2|sy-ns","solute carrier family 12, member 2","protein-coding"]
[3303,"chr17",13007439,13009136,"+",0,"NA","exon (NM_013671, exon 2 of 5)","exon (NM_013671, exon 2 of 5)",448,"NM_013671",20656,"Mm.290876","NM_013671","ENSMUSG00000006818","Sod2","MnSOD|Sod-2","superoxide dismutase 2, mitochondrial","protein-coding"]
[351,"chr1",155145050,155145233,"+",0,"NA","intron (NM_008209, intron 1 of 5)","LTR33|LTR|ERVL",1639,"NM_008209",15064,"Mm.7580","NM_008209","ENSMUSG00000026471","Mr1","H2ls","major histocompatibility complex, class I-related","protein-coding"]
[8691,"chr9",110531940,110533519,"+",0,"NA","exon (NM_001081340, exon 1 of 21)","exon (NM_001081340, exon 1 of 21)",132,"NM_001081340",235626,"Mm.288949","NM_001081340","ENSMUSG00000044791","Setd2","4921524K10Rik|BC031601|KMT3A","SET domain containing 2","protein-coding"]
[6337,"chr5",112324284,112327023,"+",0,"NA","promoter-TSS (NM_018783)","promoter-TSS (NM_018783)",-716,"NM_018783",54723,"Mm.172947","NM_018783","ENSMUSG00000029345","Tfip11","2810002G02Rik|AF097181|AW046167|Srr1|TIP33|Tip39","tuftelin interacting protein 11","protein-coding"]
[1854,"chr12",76837387,76838330,"+",0,"NA","intron (NM_145927, intron 1 of 11)","intron (NM_145927, intron 1 of 11)",391,"NM_145927",110606,"Mm.151174","NM_145927","ENSMUSG00000033373","Fntb","2010013E13Rik|AA409500","farnesyltransferase, CAAX box, beta","protein-coding"]
[1498,"chr11",100858205,100860848,"+",0,"NA","promoter-TSS (NM_001164062)","promoter-TSS (NM_001164062)",175,"NM_011488",20850,"Mm.277403","NM_011488","ENSMUSG00000004043","Stat5a","AA959963|STAT5","signal transducer and activator of transcription 5A","protein-coding"]
[6863,"chr6",91878063,91878608,"+",0,"NA","intron (NM_172730, intron 1 of 10)","CpG",282,"NM_172730",232236,"Mm.234879","NM_172730","ENSMUSG00000034083","Ccdc174","C130022K22Rik","coiled-coil domain containing 174","protein-coding"]
[5874,"chr4",134286427,134288482,"+",0,"NA","promoter-TSS (NM_001163794)","promoter-TSS (NM_001163794)",-201,"NM_001163794",230809,"Mm.22778","NM_146156","ENSMUSG00000050890","Pdik1l","BC027088|stk35l2","PDLIM1 interacting kinase 1 like","protein-coding"]
[4620,"chr2",93461700,93463004,"+",0,"NA","promoter-TSS (NM_001271461)","promoter-TSS (NM_001271461)",150,"NM_001271430",12521,"Mm.4261","NM_007656","ENSMUSG00000027215","Cd82","AA682076|AL023070|C33|IA4|Kai1|Tspan27","CD82 antigen","protein-coding"]
[901,"chr10",127120606,127121026,"+",0,"NA","intron (NM_001171026, intron 1 of 14)","intron (NM_001171026, intron 1 of 14)",344,"NM_177614",216440,"Mm.295246","NM_177614","ENSMUSG00000040462","Os9","4632413K17Rik|AU022351","amplified in osteosarcoma","protein-coding"]
[2191,"chr13",65112107,65113401,"+",0,"NA","5' UTR (NM_133680, exon 1 of 12)","5' UTR (NM_133680, exon 1 of 12)",228,"NM_001083901",66631,"Mm.239196","NM_133680","ENSMUSG00000038212","Hiatl1","5730414C17Rik|AU045608|AW539692","hippocampus abundant transcript-like 1","protein-coding"]
[8322,"chr9",31385684,31386780,"+",0,"NA","promoter-TSS (NM_172766)","promoter-TSS (NM_172766)",40,"NM_172766",235134,"Mm.238146","NM_172766","ENSMUSG00000042185","Nfrkb","A530090G11Rik","nuclear factor related to kappa B binding protein","protein-coding"]
[1056,"chr11",33162296,33163933,"+",0,"NA","promoter-TSS (NM_008722)","promoter-TSS (NM_008722)",92,"NM_001252261",18148,"Mm.485384","NM_008722","ENSMUSG00000057113","Npm1","B23|NO38|Npm","nucleophosmin 1","protein-coding"]
[7032,"chr7",3167913,3169184,"+",0,"NA","intron (NM_001004153, intron 1 of 11)","intron (NM_001004153, intron 1 of 11)",655,"NM_001004153",245128,"Mm.268551","NM_001004153","ENSMUSG00000054753","AU018091","-","expressed sequence AU018091","protein-coding"]
[3664,"chr17",63499116,63500953,"+",0,"NA","5' UTR (NM_015794, exon 1 of 9)","5' UTR (NM_015794, exon 1 of 9)",546,"NM_015794",50758,"Mm.136366","NM_015794",null,"Fbxl17","6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13","F-box and leucine-rich repeat protein 17","protein-coding"]
[6540,"chr5",139149223,139150986,"+",0,"NA","promoter-TSS (NM_001081265)","promoter-TSS (NM_001081265)",-119,"NM_001081265",433956,"Mm.5547","NM_001081265","ENSMUSG00000025857","Dnaaf5","BC053401|C76907|Heatr2","dynein, axonemal, assembly factor 5","protein-coding"]
[3108,"chr16",27387506,27390124,"+",0,"NA","promoter-TSS (NM_026202)","promoter-TSS (NM_026202)",-141,"NM_001025615",67501,"Mm.258985","NM_026202","ENSMUSG00000038127","Ccdc50","C3orf6","coiled-coil domain containing 50","protein-coding"]
[4285,"chr19",55315217,55317320,"+",0,"NA","promoter-TSS (NM_025883)","promoter-TSS (NM_025883)",211,"NM_001293686",53611,"Mm.258637","NM_016862",null,"Vti1a","1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2","vesicle transport through interaction with t-SNAREs 1A","protein-coding"]
[5066,"chr3",51223332,51225471,"+",0,"NA","promoter-TSS (NM_009834)","promoter-TSS (NM_009834)",-46,"NM_009834",12457,"Mm.86541","NM_009834","ENSMUSG00000023087","Noct","AU043840|Ccr4|Ccrn4l","nocturnin","protein-coding"]
[2753,"chr15",74760505,74767234,"+",0,"NA","promoter-TSS (NM_010742)","promoter-TSS (NM_010742)",-302,"NM_010742",17068,"Mm.878","NM_010742","ENSMUSG00000034634","Ly6d","Ly-61|Ly61|Thb","lymphocyte antigen 6 complex, locus D","protein-coding"]
[1473,"chr11",98835208,98840017,"+",0,"NA","exon (NM_001080925, exon 1 of 15)","exon (NM_001080925, exon 1 of 15)",827,"NM_001080925",268480,"Mm.340766","NM_001080925","ENSMUSG00000038020","Rapgefl1","B230105J10","Rap guanine nucleotide exchange factor (GEF)-like 1","protein-coding"]
[881,"chr10",120208710,120210102,"+",0,"NA","intron (NM_026617, intron 1 of 6)","intron (NM_026617, intron 1 of 6)",580,"NM_026617",68212,"Mm.157426","NM_026617","ENSMUSG00000020225","Tmbim4","0610007H07Rik|AU022431","transmembrane BAX inhibitor motif containing 4","protein-coding"]
[2461,"chr14",52196362,52197876,"+",0,"NA","exon (NM_033618, exon 1 of 26)","exon (NM_033618, exon 1 of 26)",120,"NM_033618",114741,"Mm.21662","NM_033618","ENSMUSG00000035726","Supt16","Cdc68|Fact140|Spt16|Supt16h","suppressor of Ty 16","protein-coding"]
[6880,"chr6",100833295,100834930,"+",0,"NA","intron (NM_182939, intron 1 of 8)","CpG",474,"NM_182939",232314,"Mm.27223","NM_182939","ENSMUSG00000052144","Ppp4r2","BE691708|C230060M08Rik","protein phosphatase 4, regulatory subunit 2","protein-coding"]
[3186,"chr16",55838412,55839413,"+",0,"NA","promoter-TSS (NM_001159395)","promoter-TSS (NM_001159395)",-271,"NM_001159395",80859,"Mm.247272","NM_030612","ENSMUSG00000035356","Nfkbiz","AA408868|INAP|Mail","nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta","protein-coding"]
[405,"chr1",170173603,170176088,"+",0,"NA","5' UTR (NM_133806, exon 1 of 11)","5' UTR (NM_133806, exon 1 of 11)",119,"NM_001305046",107652,"Mm.27969","NM_133806","ENSMUSG00000026670","Uap1","AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2","UDP-N-acetylglucosamine pyrophosphorylase 1","protein-coding"]
[7033,"chr7",3289045,3292378,"+",0,"NA","5' UTR (NM_001093765, exon 1 of 3)","5' UTR (NM_001093765, exon 1 of 3)",155,"NM_001093765",50918,"Mm.29874","NM_016969","ENSMUSG00000068566","Myadm","D7Wsu62e","myeloid-associated differentiation marker","protein-coding"]
[6092,"chr5",25497438,25500496,"+",0,"NA","promoter-TSS (NR_030700)","promoter-TSS (NR_030700)",-184,"NM_001081383",231051,"Mm.332268","NM_001081383","ENSMUSG00000038056","Kmt2c","E330008K23Rik|HALR|Mll3|mKIAA1506","lysine (K)-specific methyltransferase 2C","protein-coding"]
[8172,"chr8",119557920,119559474,"+",0,"NA","promoter-TSS (NM_001167910)","promoter-TSS (NM_001167910)",64,"NM_001167910",56453,"Mm.206934","NM_019709","ENSMUSG00000031835","Mbtps1","0610038M03Rik|AV003995|S1P|SKI-1|Ski1|mKIAA0091","membrane-bound transcription factor peptidase, site 1","protein-coding"]
[8045,"chr8",94011332,94013066,"+",0,"NA","intron (NM_011787, intron 1 of 13)","CpG",441,"NM_011787",23802,"Mm.34641","NM_011787","ENSMUSG00000031751","Amfr","gp78","autocrine motility factor receptor","protein-coding"]
[1734,"chr12",17266132,17267145,"+",0,"NA","promoter-TSS (NM_027959)","promoter-TSS (NM_027959)",43,"NM_027959",71853,"Mm.222825","NM_027959","ENSMUSG00000020571","Pdia6","1700015E05Rik|AL023058|C77895|CaBP5|P5|Txndc7","protein disulfide isomerase associated 6","protein-coding"]
[3230,"chr16",87698197,87700979,"+",0,"NA","intron (NM_007520, intron 1 of 4)","intron (NM_007520, intron 1 of 4)",634,"NM_007520",12013,"Mm.26147","NM_007520","ENSMUSG00000025612","Bach1","6230421P05Rik|AI323795","BTB and CNC homology 1","protein-coding"]
[7042,"chr7",4444688,4447684,"+",0,"NA","promoter-TSS (NM_175372)","promoter-TSS (NM_175372)",-529,"NM_001290411",108841,"Mm.413106","NM_175372","ENSMUSG00000008435","Rdh13","8430425D21Rik","retinol dehydrogenase 13 (all-trans and 9-cis)","protein-coding"]
[392,"chr1",165301574,165304685,"+",0,"NA","intron (NM_001310430, intron 1 of 5)","intron (NM_001310430, intron 1 of 5)",506,"NM_001310430",240888,"Mm.329929","NM_001081126","ENSMUSG00000040836","Gpr161","Gm208|Gm208Gpr|vl","G protein-coupled receptor 161","protein-coding"]
[7484,"chr7",101904989,101906911,"+",0,"NA","5' UTR (NM_025605, exon 1 of 5)","5' UTR (NM_025605, exon 1 of 5)",113,"NM_025605",66508,"Mm.30003","NM_025605","ENSMUSG00000030842","Lamtor1","2400001E08Rik|Pdro|p18","late endosomal/lysosomal adaptor, MAPK and MTOR activator 1","protein-coding"]
[2242,"chr13",80962302,80963732,"+",0,"NA","Intergenic","CpG",-1057,"NR_015587",319983,"Mm.343027","NR_015587","ENSMUSG00000097098","9330111N05Rik","-","RIKEN cDNA 9330111N05 gene","ncRNA"]
[5530,"chr4",45297196,45297534,"+",0,"NA","intron (NM_027266, intron 1 of 8)","intron (NM_027266, intron 1 of 8)",197,"NM_027266",69934,"Mm.46761","NM_027266","ENSMUSG00000035601","Trmt10b","2610042J10Rik|Rg9mtd3|Rnmtd3","tRNA methyltransferase 10B","protein-coding"]
[2254,"chr13",91807061,91808450,"+",0,"NA","promoter-TSS (NM_145453)","promoter-TSS (NM_145453)",-59,"NM_145453",69085,"Mm.52356","NM_145453","ENSMUSG00000021621","Zcchc9","1810019C21Rik","zinc finger, CCHC domain containing 9","protein-coding"]
[813,"chr10",86778134,86779510,"+",0,"NA","promoter-TSS (NM_175331)","promoter-TSS (NM_175331)",-183,"NM_175331",103466,"Mm.200446","NM_175331","ENSMUSG00000054027","Nt5dc3","AU040402|AW540062|C630002B14Rik|TU12B1-TY","5'-nucleotidase domain containing 3","protein-coding"]
[644,"chr10",59221363,59224289,"+",0,"NA","promoter-TSS (NM_001024911)","promoter-TSS (NM_001024911)",904,"NM_172939",268301,"Mm.3036","NM_172939","ENSMUSG00000098188","Sowahc","4921515A04Rik|9430099J10Rik|Ankrd57|C820004L04Rik","sosondowah ankyrin repeat domain family member C","protein-coding"]
[6810,"chr6",83120928,83122683,"+",0,"NA","promoter-TSS (NM_001083923)","promoter-TSS (NM_001083923)",-344,"NM_001083922",22377,"Mm.1109","NM_016757","ENSMUSG00000030035","Wbp1","AI255152","WW domain binding protein 1","protein-coding"]
[2477,"chr14",54893088,54895051,"+",0,"NA","promoter-TSS (NM_019402)","promoter-TSS (NM_019402)",-74,"NM_019402",54196,"Mm.7723","NM_019402",null,"Pabpn1","PAB2|Pabp3|mPABII","poly(A) binding protein, nuclear 1","protein-coding"]
[3360,"chr17",24666993,24672807,"+",0,"NA","exon (NM_183149, exon 1 of 12)","exon (NM_183149, exon 1 of 12)",148,"NM_183149",213753,"Mm.219581","NM_183149","ENSMUSG00000041130","Zfp598","BC023040|Ntrap|Znf598","zinc finger protein 598","protein-coding"]
[1820,"chr12",69892035,69893798,"+",0,"NA","promoter-TSS (NM_178628)","promoter-TSS (NM_178628)",-189,"NM_178628",73991,"Mm.474462","NM_178628","ENSMUSG00000021066","Atl1","4930435M24Rik|Adfsp|Fsp1|Spg3|Spg3a","atlastin GTPase 1","protein-coding"]
[5308,"chr3",108256458,108257863,"+",0,"NA","5' UTR (NM_011967, exon 1 of 9)","5' UTR (NM_011967, exon 1 of 9)",234,"NM_011967",26442,"Mm.208883","NM_011967","ENSMUSG00000068749","Psma5","ZETA","proteasome (prosome, macropain) subunit, alpha type 5","protein-coding"]
[5275,"chr3",101923157,101924851,"+",0,"NA","intron (NM_001039371, intron 1 of 11)","GC_rich|Low_complexity|Low_complexity",449,"NM_001039371",242126,"Mm.90204","NM_001039371","ENSMUSG00000033147","Slc22a15","2610034P21Rik|4930477M19|A530052I06Rik|BB219042","solute carrier family 22 (organic anion/cation transporter), member 15","protein-coding"]
[4185,"chr19",34066689,34067079,"+",0,"NA","promoter-TSS (NM_027340)","promoter-TSS (NM_027340)",-474,"NM_027340",70166,"Mm.75602","NM_027340","ENSMUSG00000024770","Lipn","2210418G03Rik|Lipl4","lipase, family member N","protein-coding"]
[1802,"chr12",59218578,59220580,"+",0,"NA","promoter-TSS (NM_001033156)","promoter-TSS (NM_001033156)",-96,"NM_001033156",70611,"Mm.311026","NM_001033156","ENSMUSG00000035329","Fbxo33","5730501N20Rik|AI642135","F-box protein 33","protein-coding"]
[2775,"chr15",76241946,76244130,"+",0,"NA","intron (NM_001163575, intron 2 of 10)","intron (NM_001163575, intron 2 of 10)",402,"NM_001163576",671535,"Mm.373750","NM_001163575","ENSMUSG00000063268","Parp10","-","poly (ADP-ribose) polymerase family, member 10","protein-coding"]
[7494,"chr7",102686857,102687772,"+",0,"NA","promoter-TSS (NM_198012)","promoter-TSS (NM_198012)",13,"NM_198012",101700,"Mm.39043","NM_198012","ENSMUSG00000073968","Trim68","AI894158|F730114J12Rik|Rnf137|SS-56","tripartite motif-containing 68","protein-coding"]
[2273,"chr13",96670299,96671693,"+",0,"NA","promoter-TSS (NM_008255)","promoter-TSS (NM_008255)",-60,"NM_008255",15357,"Mm.316652","NM_008255","ENSMUSG00000021670","Hmgcr","HMG-CoAR|Red","3-hydroxy-3-methylglutaryl-Coenzyme A reductase","protein-coding"]
[8343,"chr9",41580802,41581937,"+",0,"NA","promoter-TSS (NR_029822)","promoter-TSS (NR_029822)",116,"NR_015483",73144,"Mm.38166","NM_001033153","ENSMUSG00000074415","3110039I08Rik","2610203C20Rik|AI848448|D230004N17Rik|D3Mgi9|Mir100hg","RIKEN cDNA 3110039I08 gene","ncRNA"]
[791,"chr10",82128084,82128303,"+",0,"NA","intron (NM_001163064, intron 1 of 3)","CpG",180,"NM_001163064",216177,"Mm.482395","NM_001163064","ENSMUSG00000078435","AU041133","-","expressed sequence AU041133","protein-coding"]
[3330,"chr17",23550421,23551623,"+",0,"NA","intron (NR_126484, intron 1 of 1)","intron (NR_126484, intron 1 of 1)",223,"NR_126484",320020,"Mm.445111","NR_126484",null,"6330415G19Rik","-","RIKEN cDNA 6330415G19 gene","ncRNA"]
[2231,"chr13",74639124,74640390,"+",0,"NA","promoter-TSS (NM_030711)","promoter-TSS (NM_030711)",-115,"NM_030711",80898,"Mm.83526","NM_030711","ENSMUSG00000021583","Erap1","Arts1|ERAAP|PILSA|PILSAP","endoplasmic reticulum aminopeptidase 1","protein-coding"]
[5904,"chr4",136284693,136287740,"+",0,"NA","5' UTR (NM_009557, exon 1 of 3)","5' UTR (NM_009557, exon 1 of 3)",147,"NM_009557",22704,"Mm.1504","NM_009557","ENSMUSG00000051351","Zfp46","AI426962|Mlz-4|Zfp-46|Znf436","zinc finger protein 46","protein-coding"]
[3231,"chr16",89957916,89962106,"+",0,"NA","intron (NM_001145886, intron 1 of 27)","intron (NM_001145886, intron 1 of 27)",816,"NM_009384",21844,"Mm.310902","NM_009384","ENSMUSG00000002489","Tiam1","AI847750|D16Ium10|D16Ium10e","T cell lymphoma invasion and metastasis 1","protein-coding"]
[916,"chr10",127757227,127763295,"+",0,"NA","intron (NM_080436, intron 1 of 3)","intron (NM_080436, intron 1 of 3)",498,"NM_080436",107605,"Mm.484271","NM_080436","ENSMUSG00000089789","Rdh1","-","retinol dehydrogenase 1 (all trans)","protein-coding"]
[3646,"chr17",56608492,56610335,"+",0,"NA","intron (NM_153152, intron 1 of 3)","intron (NM_153152, intron 1 of 3)",358,"NM_153152",224904,"Mm.34002","NM_153152","ENSMUSG00000049760","2410015M20Rik","Mic13|QIL1|sr104","RIKEN cDNA 2410015M20 gene","protein-coding"]
[7996,"chr8",84659609,84665572,"+",0,"NA","exon (NM_010499, exon 1 of 1)","exon (NM_010499, exon 1 of 1)",262,"NM_010499",15936,"Mm.399","NM_010499","ENSMUSG00000053560","Ier2","AI317238|Ch1|Pip92","immediate early response 2","protein-coding"]
[4857,"chr2",154602673,154604841,"+",0,"NA","promoter-TSS (NM_021534)","promoter-TSS (NM_021534)",-84,"NM_021534",59038,"Mm.24673","NM_021534",null,"Pxmp4","3010018P03Rik|Pmp24","peroxisomal membrane protein 4","protein-coding"]
[4828,"chr2",151038652,151039730,"+",0,"NA","intron (NM_026086, intron 1 of 1)","CpG",188,"NM_026086",67311,"Mm.480682","NM_026086","ENSMUSG00000053916","Nanp","1600031M04Rik|Hdhd4","N-acetylneuraminic acid phosphatase","protein-coding"]
[8120,"chr8",107095501,107097203,"+",0,"NA","promoter-TSS (NR_106043)","promoter-TSS (NR_106043)",193,"NM_001286200",21750,"Mm.6402","NM_009353","ENSMUSG00000031921","Terf2","TRF2","telomeric repeat binding factor 2","protein-coding"]
[8764,"chrX",7762781,7764904,"+",0,"NA","promoter-TSS (NM_001271491)","promoter-TSS (NM_001271491)",-101,"NM_001105197",209446,"Mm.249142","NM_172472","ENSMUSG00000000134","Tfe3","F830016E06Rik|Tcfe3|Tfe-3|bHLHe33","transcription factor E3","protein-coding"]
[4476,"chr2",33430759,33431811,"+",0,"NA","promoter-TSS (NM_001085507)","promoter-TSS (NM_001085507)",39,"NM_001085507",241311,"Mm.296512","NM_001085507","ENSMUSG00000068966","Zbtb34","Gm349|mKIAA1993","zinc finger and BTB domain containing 34","protein-coding"]
[2331,"chr14",7818031,7820238,"+",0,"NA","intron (NM_134080, intron 1 of 45)","intron (NM_134080, intron 1 of 45)",1177,"NM_134080",286940,"Mm.489652","NM_134080","ENSMUSG00000025278","Flnb","AL024016|Fln-b","filamin, beta","protein-coding"]
[1902,"chr12",85110378,85111595,"+",0,"NA","intron (NM_030225, intron 1 of 14)","CpG",153,"NM_030225",78920,"Mm.296221","NM_030225","ENSMUSG00000004789","Dlst","1600017E01Rik|4632413C10Rik|4930529O08Rik|DLTS","dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)","protein-coding"]
[1561,"chr11",106215332,106217822,"+",0,"NA","promoter-TSS (NM_026009)","promoter-TSS (NM_026009)",-210,"NM_026009",67163,"Mm.22109","NM_026009",null,"Ccdc47","2610204L23Rik|C88307|asp4|calumin","coiled-coil domain containing 47","protein-coding"]
[7503,"chr7",105750796,105752223,"+",0,"NA","intron (NM_009906, intron 3 of 12)","intron (NM_009906, intron 3 of 12)",698,"NM_009906",12751,"Mm.20837","NM_009906","ENSMUSG00000030894","Tpp1","Cln2|LPIC|TPP-1|TPP-I","tripeptidyl peptidase I","protein-coding"]
[6316,"chr5",108460745,108462715,"+",0,"NA","intron (NM_172716, intron 1 of 10)","intron (NM_172716, intron 1 of 10)",398,"NM_172716",69587,"Mm.261218","NM_172716",null,"Pcgf3","2310035N15Rik|AI662857|D630042K08Rik|DONG1|E430039C14|RNF3A|Rnf3","polycomb group ring finger 3","protein-coding"]
[2001,"chr13",3633722,3634722,"+",0,"NA","intron (NM_001267724, intron 1 of 3)","CpG",190,"NM_001267724",142688,"Mm.253061","NM_178283","ENSMUSG00000033781","Asb13","2210015B19Rik|6430573K02Rik|Asb-13|C85285","ankyrin repeat and SOCS box-containing 13","protein-coding"]
[4394,"chr2",26351084,26352621,"+",0,"NA","TTS (NM_001037747)","TTS (NM_001037747)",258,"NM_026828",52838,"Mm.31239","NM_026828","ENSMUSG00000075467","Dnlz","1110034G11Rik|D2Bwg1335e|HEP1","DNL-type zinc finger","protein-coding"]
[3731,"chr17",86166402,86168672,"+",0,"NA","promoter-TSS (NM_011104)","promoter-TSS (NM_011104)",-248,"NM_011104",18754,"Mm.24614","NM_011104","ENSMUSG00000045038","Prkce","5830406C15Rik|PKC[e]|PKCepsilon|Pkce|R75156","protein kinase C, epsilon","protein-coding"]
[3216,"chr16",77008835,77009349,"+",0,"NA","intron (NR_040573, intron 1 of 2)","MERVK26-int|LTR|ERVK",1789,"NR_040573",76601,"Mm.396217","NR_040573","ENSMUSG00000100857","1700041M19Rik","-","RIKEN cDNA 1700041M19 gene","ncRNA"]
[4357,"chr2",23067431,23069993,"+",0,"NA","promoter-TSS (NM_001102438)","promoter-TSS (NM_001102438)",-360,"NM_001102437",74159,"Mm.181973","NM_028793","ENSMUSG00000026781","Acbd5","1300014E15Rik","acyl-Coenzyme A binding domain containing 5","protein-coding"]
[5796,"chr4",128727260,128730362,"+",0,"NA","intron (NM_001195083, intron 1 of 6)","intron (NM_001195083, intron 1 of 6)",1240,"NM_001195083",54383,"Mm.473738","NM_018774","ENSMUSG00000028796","Phc2","A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36","polyhomeotic-like 2 (Drosophila)","protein-coding"]
[6670,"chr6",30509087,30510476,"+",0,"NA","promoter-TSS (NM_178625)","promoter-TSS (NM_178625)",2,"NM_178625",72649,"Mm.45418","NM_178625","ENSMUSG00000029782","Tmem209","2700094F01Rik|AI428435","transmembrane protein 209","protein-coding"]
[4234,"chr19",44135328,44136394,"+",0,"NA","promoter-TSS (NM_001081077)","promoter-TSS (NM_001081077)",15,"NM_001081077",72502,"Mm.276109","NM_001081077","ENSMUSG00000025200","Cwf19l1","2610528C06Rik|AI854304|AV336991","CWF19-like 1, cell cycle control (S. pombe)","protein-coding"]
[3695,"chr17",74293913,74296404,"+",0,"NA","promoter-TSS (NM_133771)","promoter-TSS (NM_133771)",-295,"NM_133771",76890,"Mm.311874","NM_133771","ENSMUSG00000058704","Memo1","0610016J10Rik|D930048L02Rik","mediator of cell motility 1","protein-coding"]
[1239,"chr11",70219167,70221895,"+",0,"NA","exon (NM_172371, exon 1 of 4)","exon (NM_172371, exon 1 of 4)",463,"NM_172371",69309,"Mm.93266","NM_172371","ENSMUSG00000044367","Slc16a13","1700007D07Rik","solute carrier family 16 (monocarboxylic acid transporters), member 13","protein-coding"]
[7600,"chr7",127013152,127017289,"+",0,"NA","promoter-TSS (NM_080638)","promoter-TSS (NM_080638)",-626,"NM_080638",78388,"Mm.228797","NM_080638","ENSMUSG00000030681","Mvp","2310009M24Rik|LRP|VAULT1","major vault protein","protein-coding"]
[1809,"chr12",69183233,69184895,"+",0,"NA","promoter-TSS (NM_025589)","promoter-TSS (NM_025589)",3,"NM_025589",66483,"Mm.379115","NM_025589","ENSMUSG00000049751","Rpl36al","2410038A03Rik|RPL36A","ribosomal protein L36A-like","protein-coding"]
[2744,"chr15",72809505,72810516,"+",0,"NA","non-coding (NR_002864, exon 1 of 1)","non-coding (NR_002864, exon 1 of 1)",314,"NR_002864",353342,"Mm.440245","NR_002864","ENSMUSG00000106847","Peg13","-","paternally expressed 13","ncRNA"]
[6816,"chr6",83348782,83349945,"+",0,"NA","promoter-TSS (NM_175277)","promoter-TSS (NM_175277)",-121,"NM_175277",78653,"Mm.391470","NM_175277",null,"Bola3","1810056O20Rik","bolA-like 3 (E. coli)","protein-coding"]
[3199,"chr16",58523046,58524072,"+",0,"NA","promoter-TSS (NM_018784)","promoter-TSS (NM_018784)",-247,"NM_018784",54613,"Mm.212742","NM_018784","ENSMUSG00000022747","St3gal6","1700023B24Rik|AI930218|AW552396|Siat10|St3galVI","ST3 beta-galactoside alpha-2,3-sialyltransferase 6","protein-coding"]
[5801,"chr4",129105114,129106848,"+",0,"NA","intron (NM_133881, intron 1 of 4)","B1F|SINE|Alu",433,"NM_001290706",66260,"Mm.25295","NM_025452","ENSMUSG00000028786","Tmem54","1810017F10Rik|AI507302","transmembrane protein 54","protein-coding"]
[4669,"chr2",116063999,116064184,"+",0,"NA","intron (NM_001159567, intron 1 of 12)","intron (NM_001159567, intron 1 of 12)",530,"NM_001159569",17536,"Mm.247566","NM_010825","ENSMUSG00000027210","Meis2","A430109D20Rik|Mrg1|Stra10","Meis homeobox 2","protein-coding"]
[5287,"chr3",104510741,104512713,"+",0,"NA","5' UTR (NM_001025067, exon 1 of 18)","5' UTR (NM_001025067, exon 1 of 18)",191,"NM_001310698",269473,"Mm.34855","NM_001025067","ENSMUSG00000032913","Lrig2","4632419I10Rik|BB096938|LIG-2","leucine-rich repeats and immunoglobulin-like domains 2","protein-coding"]
[60,"chr1",37871466,37873411,"+",0,"NA","intron (NM_001037918, intron 1 of 1)","intron (NM_001037918, intron 1 of 1)",232,"NM_001037918",623661,"Mm.138000","NM_001037918","ENSMUSG00000037216","Lipt1","EG623661","lipoyltransferase 1","protein-coding"]
[1400,"chr11",90389694,90390773,"+",0,"NA","intron (NM_172563, intron 1 of 3)","intron (NM_172563, intron 1 of 3)",684,"NM_172563",217082,"Mm.158903","NM_172563","ENSMUSG00000003949","Hlf","E230015K02Rik","hepatic leukemia factor","protein-coding"]
[1067,"chr11",43747404,43748320,"+",0,"NA","intron (NM_133795, intron 1 of 7)","CpG",111,"NM_133795",66827,"Mm.271974","NM_133795","ENSMUSG00000041278","Ttc1","4833412C19Rik|C79328|TPR1","tetratricopeptide repeat domain 1","protein-coding"]
[691,"chr10",71284571,71285170,"+",0,"NA","intron (NM_145420, intron 1 of 6)","CpG",392,"NM_145420",216080,"Mm.270530","NM_145420","ENSMUSG00000019927","Ube2d1","UBCH5","ubiquitin-conjugating enzyme E2D 1","protein-coding"]
[2615,"chr14",105894312,105899005,"+",0,"NA","5' UTR (NM_011897, exon 1 of 2)","5' UTR (NM_011897, exon 1 of 2)",161,"NM_011897",24064,"Mm.89982","NM_011897","ENSMUSG00000022114","Spry2","sprouty2","sprouty homolog 2 (Drosophila)","protein-coding"]
[5173,"chr3",89349214,89350950,"+",0,"NA","promoter-TSS (NM_009614)","promoter-TSS (NM_009614)",-72,"NM_009614",11490,"Mm.274049","NM_009614","ENSMUSG00000028041","Adam15","MDC15|metargidin","a disintegrin and metallopeptidase domain 15 (metargidin)","protein-coding"]
[3134,"chr16",32877235,32879095,"+",0,"NA","intron (NM_001159349, intron 1 of 7)","CpG",381,"NM_001159349",69823,"Mm.12831","NM_027226","ENSMUSG00000022800","Fyttd1","2010005M05Rik|3830411L18Rik|3830421F13Rik|4933423A17Rik|AI098218|AW539567|C85190","forty-two-three domain containing 1","protein-coding"]
[5245,"chr3",95984863,95986138,"+",0,"NA","promoter-TSS (NR_045872)","promoter-TSS (NR_045872)",-10,"NR_045872",668224,"Mm.357766","NR_045872",null,"Gm9054","EG668224","predicted gene 9054","ncRNA"]
[5453,"chr4",15944687,15945687,"+",0,"NA","intron (NM_026172, intron 1 of 9)","CpG",320,"NM_026172",67460,"Mm.393293","NM_026172","ENSMUSG00000028223","Decr1","1200012F07Rik|Decr|Nadph","2,4-dienoyl CoA reductase 1, mitochondrial","protein-coding"]
[3171,"chr16",44346880,44348199,"+",0,"NA","intron (NM_144550, intron 1 of 17)","CpG",138,"NM_144550",212514,"Mm.24035","NM_144550","ENSMUSG00000043065","Spice1","Ccdc52|D16Ertd480e","spindle and centriole associated protein 1","protein-coding"]
[427,"chr1",172206123,172206710,"+",0,"NA","intron (NM_011063, intron 1 of 3)","intron (NM_011063, intron 1 of 3)",365,"NM_011063",18611,"Mm.544","NM_011063","ENSMUSG00000013698","Pea15a","Mat1|PEA-15|Pea15|Pkcs15","phosphoprotein enriched in astrocytes 15A","protein-coding"]
[5121,"chr3",83841312,83841783,"+",0,"NA","promoter-TSS (NM_011905)","promoter-TSS (NM_011905)",61,"NM_011905",24088,"Mm.87596","NM_011905","ENSMUSG00000027995","Tlr2","Ly105","toll-like receptor 2","protein-coding"]
[6593,"chr5",145203403,145204979,"+",0,"NA","promoter-TSS (NM_001167944)","promoter-TSS (NM_001167944)",-368,"NM_016683",22757,"Mm.332842","NM_016683","ENSMUSG00000055991","Zkscan5","AI132486|AI326970|Zfp95|hKraba1","zinc finger with KRAB and SCAN domains 5","protein-coding"]
[4735,"chr2",126151765,126152539,"+",0,"NA","promoter-TSS (NM_026981)","promoter-TSS (NM_026981)",11,"NM_026981",69185,"Mm.29019","NM_026981","ENSMUSG00000023330","Dtwd1","1810033A06Rik","DTW domain containing 1","protein-coding"]
[82,"chr1",44118417,44120212,"+",0,"NA","promoter-TSS (NM_023645)","promoter-TSS (NM_023645)",-541,"NM_023645",72050,"Mm.281714","NM_023645","ENSMUSG00000026047","Kdelc1","1810049A15Rik|5730416C13Rik|EP58|Kdel1","KDEL (Lys-Asp-Glu-Leu) containing 1","protein-coding"]
[3464,"chr17",32452294,32456131,"+",0,"NA","intron (NM_177307, intron 1 of 13)","RSINE1|SINE|B4",1489,"NM_177307",320997,"Mm.130900","NM_177307",null,"Cyp4f39","4732474A20Rik","cytochrome P450, family 4, subfamily f, polypeptide 39","protein-coding"]
[1763,"chr12",33147042,33148490,"+",0,"NA","promoter-TSS (NM_028139)","promoter-TSS (NM_028139)",80,"NM_028139",380753,"Mm.41540","NM_028139","ENSMUSG00000020564","Atxn7l1","2810423G08Rik|Atxn7l4","ataxin 7-like 1","protein-coding"]
[4499,"chr2",37430341,37431650,"+",0,"NA","promoter-TSS (NM_146253)","promoter-TSS (NM_146253)",-76,"NM_146253",241322,"Mm.330182","NM_146253","ENSMUSG00000066798","Zbtb6","A830092L04Rik|ZID|Zfp482","zinc finger and BTB domain containing 6","protein-coding"]
[69,"chr1",39576482,39578034,"+",0,"NA","promoter-TSS (NM_001033135)","promoter-TSS (NM_001033135)",89,"NM_001033135",67702,"Mm.28614","NM_001033135","ENSMUSG00000048234","Rnf149","1600023E10Rik|AV037261|C76763|Gm15832|Greul4|OTTMUSG00000026591","ring finger protein 149","protein-coding"]
[4299,"chr19",59942757,59943678,"+",0,"NA","5' UTR (NM_001033172, exon 1 of 6)","5' UTR (NM_001033172, exon 1 of 6)",147,"NM_001033172",74998,"Mm.24167","NM_001033172","ENSMUSG00000040022","Rab11fip2","4930470G04Rik|A830046J09Rik|AW558126|Nrip11","RAB11 family interacting protein 2 (class I)","protein-coding"]
[224,"chr1",90202808,90205087,"+",0,"NA","promoter-TSS (NM_007722)","promoter-TSS (NM_007722)",-33,"NM_001271607",12778,"Mm.6522","NM_007722",null,"Ackr3","AW541270|CXC-R7|CXCR-7|Cmkor1|Cxcr7|RDC-1|Rdc1","atypical chemokine receptor 3","protein-coding"]
[2711,"chr15",53345617,53346665,"+",0,"NA","promoter-TSS (NM_010162)","promoter-TSS (NM_010162)",42,"NM_010162",14042,"Mm.309395","NM_010162",null,"Ext1","AA409028","exostoses (multiple) 1","protein-coding"]
[7966,"chr8",79028561,79030480,"+",0,"NA","intron (NM_001294279, intron 1 of 14)","CpG",1083,"NM_178267",622675,"Mm.48724","NM_178267","ENSMUSG00000071064","Zfp827","2810449M09Rik|D630040G17Rik|Znf827","zinc finger protein 827","protein-coding"]
[2393,"chr14",30715247,30716871,"+",0,"NA","intron (NM_001166532, intron 1 of 20)","CpG",444,"NM_001166532",54650,"Mm.294662","NM_019460","ENSMUSG00000006527","Sfmbt1","4930442N21Rik|9330180L21Rik|AA536974|Sfmbt|Smr","Scm-like with four mbt domains 1","protein-coding"]
[426,"chr1",172147640,172149080,"+",0,"NA","intron (NM_153555, intron 1 of 13)","CpG",345,"NM_153555",98193,"Mm.159915","NM_153555","ENSMUSG00000026554","Dcaf8","AA408877|AA433120|AA792214|AU018973|C76055|D1Dau35e|D1Ucla4|H326|Wdr42a","DDB1 and CUL4 associated factor 8","protein-coding"]
[7662,"chr7",133708483,133710082,"+",0,"NA","promoter-TSS (NM_001302086)","promoter-TSS (NM_001302086)",13,"NM_009479",22276,"Mm.3160","NM_009479","ENSMUSG00000030979","Uros","AI415298|UROIIIS|Uros3","uroporphyrinogen III synthase","protein-coding"]
[3222,"chr16",84833870,84837110,"+",0,"NA","promoter-TSS (NM_001302216)","promoter-TSS (NM_001302216)",135,"NM_016755",11957,"Mm.353","NM_016755","ENSMUSG00000022890","Atp5j","CF6","ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F","protein-coding"]
[1435,"chr11",96943391,96944549,"+",0,"NA","promoter-TSS (NM_134021)","promoter-TSS (NM_134021)",49,"NM_134021",103711,"Mm.254704","NM_134021","ENSMUSG00000018659","Pnpo","AI415282","pyridoxine 5'-phosphate oxidase","protein-coding"]
[279,"chr1",121567298,121567820,"+",0,"NA","intron (NM_025860, intron 1 of 12)","intron (NM_025860, intron 1 of 12)",421,"NM_025860",66942,"Mm.44219","NM_025860","ENSMUSG00000001674","Ddx18","2310005B10Rik","DEAD (Asp-Glu-Ala-Asp) box polypeptide 18","protein-coding"]
[483,"chr1",185331129,185332495,"+",0,"NA","promoter-TSS (NM_011794)","promoter-TSS (NM_011794)",-347,"NM_011794",23827,"Mm.227549","NM_011794","ENSMUSG00000026617","Bpnt1","BPntase","bisphosphate 3'-nucleotidase 1","protein-coding"]
[4145,"chr19",21104901,21107432,"+",0,"NA","TTS (NR_126458)","TTS (NR_126458)",1456,"NR_126458",75354,"Mm.243873","NR_126458",null,"4930554I06Rik","-","RIKEN cDNA 4930554I06 gene","ncRNA"]
[2055,"chr13",24830996,24832273,"+",0,"NA","promoter-TSS (NM_019551)","promoter-TSS (NM_019551)",-25,"NM_019551",56196,"Mm.427162","NM_019551","ENSMUSG00000035958","Tdp2","D13Ertd656e|Ttrap","tyrosyl-DNA phosphodiesterase 2","protein-coding"]
[5576,"chr4",62285809,62288837,"+",0,"NA","intron (NM_025286, intron 1 of 3)","intron (NM_025286, intron 1 of 3)",894,"NM_025286",20530,"Mm.292539","NM_025286","ENSMUSG00000066152","Slc31a2","AI604396|CTR2","solute carrier family 31, member 2","protein-coding"]
[1487,"chr11",100382998,100414905,"+",0,"NA","intron (NR_132425, intron 1 of 3)","(T)n|Simple_repeat|Simple_repeat",835,"NR_132425",102635937,"Mm.421398","NR_132425",null,"Gm12348","OTTMUSG00000006271","predicted gene 12348","ncRNA"]
[4698,"chr2",119785905,119787809,"+",0,"NA","intron (NM_001163701, intron 1 of 24)","MIRb|SINE|MIR",680,"NM_177294",68925,"Mm.30496","NM_177294","ENSMUSG00000034032","Rpap1","1190005L06Rik|A730023M06Rik|AU041788|AW107702|mKIAA1403","RNA polymerase II associated protein 1","protein-coding"]
[1540,"chr11",103027864,103029097,"+",0,"NA","promoter-TSS (NM_008707)","promoter-TSS (NM_008707)",-82,"NM_008707",18107,"Mm.10265","NM_008707","ENSMUSG00000020936","Nmt1","AW536594","N-myristoyltransferase 1","protein-coding"]
[7360,"chr7",66387577,66389293,"+",0,"NA","promoter-TSS (NM_146191)","promoter-TSS (NM_146191)",-94,"NM_146191",233328,"Mm.33284","NM_146191","ENSMUSG00000015133","Lrrk1","AW319595|C230002E15Rik|D130026O16Rik|mKIAA1790","leucine-rich repeat kinase 1","protein-coding"]
[3075,"chr16",20097565,20098107,"+",0,"NA","intron (NM_029436, intron 1 of 7)","CpG",282,"NM_029436",75785,"Mm.392450","NM_029436","ENSMUSG00000062901","Klhl24","1110046J11Rik|4930429H24Rik|6530402O20Rik|C85082","kelch-like 24","protein-coding"]
[2064,"chr13",30973381,30974338,"+",0,"NA","intron (NM_025588, intron 1 of 27)","CpG",188,"NM_025588",66482,"Mm.293510","NM_025588","ENSMUSG00000021357","Exoc2","2410030I24Rik|AI648199|Sec5|Sec5l1","exocyst complex component 2","protein-coding"]
[7983,"chr8",83954662,83955982,"+",0,"NA","promoter-TSS (NM_024184)","promoter-TSS (NM_024184)",-372,"NM_024184",66929,"Mm.29680","NM_024184","ENSMUSG00000005470","Asf1b","1700003K02Rik|AA409591","anti-silencing function 1B histone chaperone","protein-coding"]
[99,"chr1",53784437,53785692,"+",0,"NA","intron (NM_133810, intron 1 of 7)","CpG",151,"NM_133810",98267,"Mm.25559","NM_133810","ENSMUSG00000026094","Stk17b","3110009A03Rik|AI120141|Drak2","serine/threonine kinase 17b (apoptosis-inducing)","protein-coding"]
[4767,"chr2",130283982,130284352,"+",0,"NA","intron (NM_130884, intron 2 of 11)","CpG",284,"NM_130884",170718,"Mm.29590","NM_130884","ENSMUSG00000027406","Idh3b","C78231","isocitrate dehydrogenase 3 (NAD+) beta","protein-coding"]
[5424,"chr4",3938916,3939421,"+",0,"NA","promoter-TSS (NM_019969)","promoter-TSS (NM_019969)",-256,"NR_104356",66433,"Mm.27406","NM_181391","ENSMUSG00000042198","Chchd7","1810049H20Rik","coiled-coil-helix-coiled-coil-helix domain containing 7","protein-coding"]
[5218,"chr3",94581288,94582744,"+",0,"NA","intron (NM_001082484, intron 1 of 11)","intron (NM_001082484, intron 1 of 11)",700,"NM_001082484",76742,"Mm.28160","NM_029721","ENSMUSG00000028136","Snx27","5730552M22Rik|ESTM45|ESTM47|R75405","sorting nexin family member 27","protein-coding"]
[7758,"chr8",12755741,12757898,"+",0,"NA","promoter-TSS (NM_015804)","promoter-TSS (NM_015804)",-197,"NM_015804",50770,"Mm.257837","NM_015804","ENSMUSG00000031441","Atp11a","4930558F19Rik|AU040868|Atpc1h|Ih","ATPase, class VI, type 11A","protein-coding"]
[6295,"chr5",104021665,104022111,"+",0,"NA","promoter-TSS (NM_053262)","promoter-TSS (NM_053262)",-92,"NM_053262",114664,"Mm.46019","NM_053262","ENSMUSG00000029311","Hsd17b11","Dhrs8|Pan1b|SDR2|retSDR2","hydroxysteroid (17-beta) dehydrogenase 11","protein-coding"]
[5164,"chr3",89177530,89178160,"+",0,"NA","TTS (NM_001163432)","TTS (NM_001163432)",454,"NM_001309909",24045,"Mm.257052","NM_011886","ENSMUSG00000028049","Scamp3","Sc3","secretory carrier membrane protein 3","protein-coding"]
[533,"chr10",11280540,11282372,"+",0,"NA","promoter-TSS (NM_001168297)","promoter-TSS (NM_001168297)",126,"NM_027968",71865,"Mm.276229","NM_027968","ENSMUSG00000047648","Fbxo30","1700026A16Rik|MUSA1","F-box protein 30","protein-coding"]
[4446,"chr2",30967318,30967926,"+",0,"NA","intron (NM_144884, intron 1 of 4)","CpG",296,"NM_144884",30931,"Mm.154994","NM_144884","ENSMUSG00000026849","Tor1a","DQ2|Dyt1|torsinA","torsin family 1, member A (torsin A)","protein-coding"]
[2080,"chr13",35740053,35741945,"+",0,"NA","promoter-TSS (NM_001123386)","promoter-TSS (NM_001123386)",-403,"NM_001123386",12593,"Mm.29002","NM_009881","ENSMUSG00000059288","Cdyl","AI325931","chromodomain protein, Y chromosome-like","protein-coding"]
[4448,"chr2",31149312,31153181,"+",0,"NA","non-coding (NR_040334, exon 2 of 2)","non-coding (NR_040334, exon 2 of 2)",1045,"NR_040334",320973,"Mm.384284","NR_040334",null,"D330023K18Rik","-","RIKEN cDNA D330023K18 gene","ncRNA"]
[2416,"chr14",34673355,34675185,"+",0,"NA","5' UTR (NM_001301330, exon 1 of 19)","5' UTR (NM_001301330, exon 1 of 19)",342,"NM_001301330",218914,"Mm.27957","NM_001004436","ENSMUSG00000041408","Wapl","A530089A20Rik|BC037674|DIF-2|FOE|Wapal","WAPL cohesin release factor","protein-coding"]
[6045,"chr5",3341282,3344768,"+",0,"NA","promoter-TSS (NM_009873)","promoter-TSS (NM_009873)",-868,"NM_009873",12571,"Mm.31672","NM_009873","ENSMUSG00000040274","Cdk6","AI504062|Crk2","cyclin-dependent kinase 6","protein-coding"]
[3852,"chr18",37805993,37806993,"+",0,"NA","promoter-TSS (NM_033581)","promoter-TSS (NM_033581)",83,"NM_033581",93706,"Mm.247203","NM_033581","ENSMUSG00000023036","Pcdhgc3","PC43|Pcdh2","protocadherin gamma subfamily C, 3","protein-coding"]
[6923,"chr6",118561926,118562114,"+",0,"NA","exon (NM_001081112, exon 1 of 34)","exon (NM_001081112, exon 1 of 34)",236,"NM_001081112",232339,"Mm.276116","NM_001081112","ENSMUSG00000007827","Ankrd26","5730521P14Rik|BC008111|mKIAA1074","ankyrin repeat domain 26","protein-coding"]
[6556,"chr5",140321154,140322488,"+",0,"NA","promoter-TSS (NM_010752)","promoter-TSS (NM_010752)",-269,"NM_010752",17120,"Mm.27250","NM_010752","ENSMUSG00000029554","Mad1l1","AI173502|AW550425|Mad1","MAD1 mitotic arrest deficient 1-like 1","protein-coding"]
[4558,"chr2",72978467,72981927,"+",0,"NA","promoter-TSS (NM_001098425)","promoter-TSS (NM_001098425)",249,"NM_001018042",20687,"Mm.124328","NM_011450","ENSMUSG00000027109","Sp3","D130027J01Rik","trans-acting transcription factor 3","protein-coding"]
[263,"chr1",107527314,107531580,"+",0,"NA","intron (NM_001160307, intron 1 of 6)","intron (NM_001160307, intron 1 of 6)",444,"NM_198028",241197,"Mm.123919","NM_198028",null,"Serpinb10","9830131G07|BB233602|Serpinb10-ps","serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 10","protein-coding"]
[7550,"chr7",118491511,118492416,"+",0,"NA","promoter-TSS (NM_001033380)","promoter-TSS (NM_001033380)",12,"NM_001033380",319622,"Mm.323386","NM_001033380","ENSMUSG00000095115","Itpripl2","C130081G24|E030018N11Rik","inositol 1,4,5-triphosphate receptor interacting protein-like 2","protein-coding"]
[3746,"chr18",3279819,3282100,"+",0,"NA","5' UTR (NM_001311067, exon 1 of 4)","5' UTR (NM_001311067, exon 1 of 4)",173,"NM_001311066",12916,"Mm.5244","NM_013498","ENSMUSG00000063889","Crem","ICER|ICERI","cAMP responsive element modulator","protein-coding"]
[7628,"chr7",127875268,127877263,"+",0,"NA","5' UTR (NM_146259, exon 1 of 3)","5' UTR (NM_146259, exon 1 of 3)",558,"NM_146259",244219,"Mm.207872","NM_146259","ENSMUSG00000049728","Zfp668","BC030314|E130018B19Rik|Znf668","zinc finger protein 668","protein-coding"]
[5919,"chr4",138755097,138758174,"+",0,"NA","intron (NM_012045, intron 2 of 4)","intron (NM_012045, intron 2 of 4)",963,"NM_012045",26971,"Mm.331989","NM_012045","ENSMUSG00000028749","Pla2g2f","-","phospholipase A2, group IIF","protein-coding"]
[4536,"chr2",65236680,65239750,"+",0,"NA","intron (NM_177025, intron 1 of 13)","CpG",411,"NM_177025",319876,"Mm.34159","NM_027225","ENSMUSG00000034903","Cobll1","1810047P18Rik|Coblr1|D430044D16Rik","Cobl-like 1","protein-coding"]
[3361,"chr17",24695813,24696505,"+",0,"NA","promoter-TSS (NM_027988)","promoter-TSS (NM_027988)",-3,"NM_023040",11692,"Mm.28124","NM_023040","ENSMUSG00000040888","Gfer","Alr|ERV1","growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration)","protein-coding"]
[2985,"chr16",3884030,3885500,"+",0,"NA","5' UTR (NM_029090, exon 1 of 7)","5' UTR (NM_029090, exon 1 of 7)",146,"NM_001290689",74763,"Mm.28403","NM_029090","ENSMUSG00000005982","Naa60","1200013P24Rik|AI315146|Nat15","N(alpha)-acetyltransferase 60, NatF catalytic subunit","protein-coding"]
[3593,"chr17",46552372,46556859,"+",0,"NA","promoter-TSS (NR_105942)","promoter-TSS (NR_105942)",-726,"NR_105942",102466778,null,"NR_105942","ENSMUSG00000106514","Mir6976","mmu-mir-6976","microRNA 6976","ncRNA"]
[4979,"chr2",180115680,180120481,"+",0,"NA","Intergenic","Intergenic",-1286,"NM_144500",228983,"Mm.253578","NM_144500","ENSMUSG00000039050","Osbpl2","C130070J12Rik|ORP-2|Orp2|mKIAA0772","oxysterol binding protein-like 2","protein-coding"]
[7781,"chr8",22227364,22227601,"+",0,"NA","intron (NM_001205253, intron 1 of 3)","CpG",179,"NM_001293688",56229,"Mm.32067","NM_019576","ENSMUSG00000031480","Thsd1","4833423O18Rik|Tmtsp","thrombospondin, type I, domain 1","protein-coding"]
[3210,"chr16",65559329,65563254,"+",0,"NA","intron (NM_026879, intron 1 of 5)","intron (NM_026879, intron 1 of 5)",1406,"NM_026879",68942,"Mm.432944","NM_026879","ENSMUSG00000004843","Chmp2b","1190006E07Rik","charged multivesicular body protein 2B","protein-coding"]
[7260,"chr7",35753808,35755261,"+",0,"NA","promoter-TSS (NM_178704)","promoter-TSS (NM_178704)",-80,"NM_178704",233115,"Mm.257808","NM_178704","ENSMUSG00000043671","Dpy19l3","6030410G08|9330164H19Rik","dpy-19-like 3 (C. elegans)","protein-coding"]
[1409,"chr11",94325875,94329612,"+",0,"NA","promoter-TSS (NM_146024)","promoter-TSS (NM_146024)",-258,"NM_027799",71452,"Mm.141054","NM_027799","ENSMUSG00000020864","Ankrd40","1110011C06Rik|5530600A18Rik|Gcap15","ankyrin repeat domain 40","protein-coding"]
[5895,"chr4",135963119,135965342,"+",0,"NA","promoter-TSS (NM_178389)","promoter-TSS (NM_178389)",-935,"NM_178389",74246,"Mm.247946","NM_178389","ENSMUSG00000028671","Gale","2310002A12Rik|AI323962","galactose-4-epimerase, UDP","protein-coding"]
[4417,"chr2",29124609,29125783,"+",0,"NA","5' UTR (NM_198033, exon 1 of 26)","5' UTR (NM_198033, exon 1 of 26)",204,"NM_198033",269254,"Mm.41867","NM_198033","ENSMUSG00000043535","Setx","A130090N03|A930037J23Rik|AOA2|AW060766|Als4|SCAR1|Sen1|mKIAA0625","senataxin","protein-coding"]
[1716,"chr12",4816680,4819323,"+",0,"NA","intron (NM_025323, intron 1 of 3)","intron (NM_025323, intron 1 of 3)",393,"NM_025323",66055,"Mm.102627","NM_025323","ENSMUSG00000037361","Sf3b6","0610009D07Rik|6030419K15Rik|AV001342|Sf3b14","splicing factor 3B, subunit 6","protein-coding"]
[7688,"chr7",141192795,141195827,"+",0,"NA","promoter-TSS (NM_153777)","promoter-TSS (NM_153777)",181,"NM_001172064",70552,"Mm.45104","NM_153777","ENSMUSG00000038637","Lrrc56","5730427C23Rik|BB110509|mFLJ00101","leucine rich repeat containing 56","protein-coding"]
[1663,"chr11",119390074,119390595,"+",0,"NA","promoter-TSS (NR_035453)","promoter-TSS (NR_035453)",-138,"NR_035453",100316690,null,"NR_035453","ENSMUSG00000088015","Mir1932","mir-1932|mmu-mir-1932","microRNA 1932","ncRNA"]
[5716,"chr4",117251970,117252160,"+",0,"NA","promoter-TSS (NM_001033774)","promoter-TSS (NM_001033774)",114,"NM_001285815",68777,"Mm.331805","NM_026837","ENSMUSG00000048772","Tmem53","1110038M16Rik|1500001P22Rik|1700012A05Rik","transmembrane protein 53","protein-coding"]
[635,"chr10",57484272,57485030,"+",0,"NA","intron (NR_045353, intron 2 of 3)","intron (NR_045353, intron 2 of 3)",1702,"NR_045353",74928,"Mm.416643","NR_045353","ENSMUSG00000097370","4930467K11Rik","-","RIKEN cDNA 4930467K11 gene","ncRNA"]
[1088,"chr11",50291070,50293471,"+",0,"NA","promoter-TSS (NM_175334)","promoter-TSS (NM_175334)",66,"NM_175334",103806,"Mm.51116","NM_175334","ENSMUSG00000050567","Maml1","AI644666|AW743257|D930008C07Rik|Mam-1|Mam1|mKIAA0200","mastermind like 1 (Drosophila)","protein-coding"]
[5373,"chr3",136669169,136672405,"+",0,"NA","5' UTR (NM_008913, exon 1 of 14)","5' UTR (NM_008913, exon 1 of 14)",721,"NM_001293622",19055,"Mm.331389","NM_008913","ENSMUSG00000028161","Ppp3ca","2900074D19Rik|CN|Caln|Calna|CnA","protein phosphatase 3, catalytic subunit, alpha isoform","protein-coding"]
[979,"chr11",5837172,5837952,"+",0,"NA","exon (NM_017401, exon 1 of 11)","exon (NM_017401, exon 1 of 11)",454,"NM_017401",54125,"Mm.260194","NM_017401","ENSMUSG00000020474","Polm","AI462166|B230309I03Rik|Tdt-N","polymerase (DNA directed), mu","protein-coding"]
[3950,"chr18",75365819,75367826,"+",0,"NA","promoter-TSS (NM_001042660)","promoter-TSS (NM_001042660)",-543,"NM_001042660",17131,"Mm.34407","NM_008543","ENSMUSG00000025880","Smad7","Madh7","SMAD family member 7","protein-coding"]
[709,"chr10",77417895,77418683,"+",0,"NA","promoter-TSS (NM_130895)","promoter-TSS (NM_130895)",-16,"NM_001024837",110532,"Mm.276815","NM_130895","ENSMUSG00000020262","Adarb1","1700057H01Rik|AW124433|AW558573|Adar2|BB220382|D10Bwg0447e|Red1","adenosine deaminase, RNA-specific, B1","protein-coding"]
[3603,"chr17",46781465,46783522,"+",0,"NA","intron (NM_025433, intron 1 of 6)","intron (NM_025433, intron 1 of 6)",163,"NM_025433",66229,"Mm.218533","NM_025433","ENSMUSG00000063888","Rpl7l1","1500016H10Rik","ribosomal protein L7-like 1","protein-coding"]
[310,"chr1",134361194,134362598,"+",0,"NA","5' UTR (NM_001042485, exon 1 of 8)","5' UTR (NM_001042485, exon 1 of 8)",103,"NM_001042485",57439,"Mm.393140","NM_020588","ENSMUSG00000042305","Tmem183a","1300007B12Rik|1700020N19Rik|Tmem183","transmembrane protein 183A","protein-coding"]
[192,"chr1",79776240,79776588,"+",0,"NA","intron (NM_001081210, intron 1 of 3)","intron (NM_001081210, intron 1 of 3)",396,"NM_001081210",69163,"Mm.238455","NM_001081210","ENSMUSG00000026248","Mrpl44","1810030E18Rik|5730593H20Rik|AI463302","mitochondrial ribosomal protein L44","protein-coding"]
[8458,"chr9",59748701,59751685,"+",0,"NA","promoter-TSS (NM_173018)","promoter-TSS (NM_173018)",456,"NM_001172069",71599,"Mm.279070","NM_027838","ENSMUSG00000051705","Senp8","9130010J17Rik|AU020827|Den1|Nedp1|Prsc2","SUMO/sentrin specific peptidase 8","protein-coding"]
[4320,"chr2",5844462,5845795,"+",0,"NA","promoter-TSS (NM_016918)","promoter-TSS (NM_016918)",94,"NM_016918",53893,"Mm.251904","NM_016918","ENSMUSG00000025817","Nudt5","-","nudix (nucleoside diphosphate linked moiety X)-type motif 5","protein-coding"]
[4262,"chr19",46394783,46396163,"+",0,"NA","intron (NM_016860, intron 1 of 10)","CpG",262,"NM_016860",54130,"Mm.3118","NM_016860","ENSMUSG00000025228","Actr1a","Arp1|alpha-Arp1","ARP1 actin-related protein 1A, centractin alpha","protein-coding"]
[3764,"chr18",10617486,10618529,"+",0,"NA","intron (NM_009226, intron 1 of 3)","CpG",211,"NM_009226",20641,"Mm.603","NM_009226","ENSMUSG00000002477","Snrpd1","AA407109|AL023031|SMD1","small nuclear ribonucleoprotein D1","protein-coding"]
[1707,"chr12",3364905,3365768,"+",0,"NA","5' UTR (NM_008445, exon 1 of 8)","5' UTR (NM_008445, exon 1 of 8)",204,"NM_008445",16570,"Mm.7688","NM_008445","ENSMUSG00000020668","Kif3c","mKIAA4058","kinesin family member 3C","protein-coding"]
[7753,"chr8",11550075,11551248,"+",0,"NA","exon (NM_024248, exon 1 of 15)","exon (NM_024248, exon 1 of 15)",110,"NM_024248",71941,"Mm.196576","NM_024248","ENSMUSG00000056228","Cars2","2310051N18Rik|2410044A07Rik|D530030H10Rik","cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)","protein-coding"]
[3103,"chr16",25286024,25287403,"+",0,"NA","promoter-TSS (NM_175165)","promoter-TSS (NM_175165)",-104,"NM_175165",71338,"Mm.126851","NM_175165","ENSMUSG00000048399","Tprg","5430420C16Rik|Tprg1","transformation related protein 63 regulated","protein-coding"]
[2044,"chr13",23581886,23583029,"+",0,"NA","TTS (NM_175654)","TTS (NM_175654)",855,"NM_175654",319156,"Mm.260530","NM_175654","ENSMUSG00000061482","Hist1h4d","-","histone cluster 1, H4d","protein-coding"]
[8038,"chr8",91069645,91071292,"+",0,"NA","intron (NM_001282000, intron 1 of 20)","CpG",411,"NM_001282000",19651,"Mm.235580","NM_011250","ENSMUSG00000031666","Rbl2","PRB2|RBR-2|Rb2|p130","retinoblastoma-like 2","protein-coding"]
[4553,"chr2",71388884,71390110,"+",0,"NA","intron (NM_026115, intron 1 of 10)","CpG",237,"NM_026115",107435,"Mm.272472","NM_026115","ENSMUSG00000027018","Hat1","2410071B14Rik|AA536933|Hat-1|KAT1","histone aminotransferase 1","protein-coding"]
[4231,"chr19",43938377,43940436,"+",0,"NA","intron (NM_028029, intron 1 of 15)","intron (NM_028029, intron 1 of 15)",792,"NM_028029",71972,"Mm.159024","NM_028029",null,"Dnmbp","2410003L07Rik|2410003M15Rik|TUBA","dynamin binding protein","protein-coding"]
[1437,"chr11",97025306,97026116,"+",0,"NA","TTS (NM_031183)","TTS (NM_031183)",707,"NR_133649",100127433,"Mm.156282","NR_133649",null,"Gm11532","OTTMUSG00000001860|Sp6os","predicted gene 11532","ncRNA"]
[6189,"chr5",52783089,52783615,"+",0,"NA","intron (NM_001308144, intron 1 of 12)","intron (NM_001308144, intron 1 of 12)",297,"NM_030185",78796,"Mm.266886","NM_030185","ENSMUSG00000029179","Zcchc4","4930449I23Rik","zinc finger, CCHC domain containing 4","protein-coding"]
[2517,"chr14",59200727,59201874,"+",0,"NA","promoter-TSS (NM_027764)","promoter-TSS (NM_027764)",72,"NM_027764",71330,"Mm.234195","NM_027764","ENSMUSG00000035469","Rcbtb1","5430409I18Rik|AW111883|CLLD7|CLLL7","regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1","protein-coding"]
[7547,"chr7",118115474,118116673,"+",0,"NA","promoter-TSS (NM_170669)","promoter-TSS (NM_170669)",74,"NM_170669",267019,"Mm.288212","NM_170669","ENSMUSG00000008683","Rps15a","A630031B11Rik","ribosomal protein S15A","protein-coding"]
[6108,"chr5",30814396,30816296,"+",0,"NA","intron (NM_133350, intron 1 of 6)","intron (NM_133350, intron 1 of 6)",705,"NM_133350",100732,"Mm.332295","NM_133350","ENSMUSG00000029166","Mapre3","AI790651|EB2|EB3|EBF3|RP3","microtubule-associated protein, RP/EB family, member 3","protein-coding"]
[1740,"chr12",21416284,21418598,"+",0,"NA","promoter-TSS (NM_011739)","promoter-TSS (NM_011739)",-5,"NM_011739",22630,"Mm.289630","NM_011739","ENSMUSG00000076432","Ywhaq","2700028P07Rik|AA409740|AU021156|R74690","tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide","protein-coding"]
[1600,"chr11",114675640,114675894,"+",0,"NA","intron (NM_053273, intron 1 of 13)","CpG",299,"NM_053273",117160,"Mm.271934","NM_053273","ENSMUSG00000034714","Ttyh2","1110001A03Rik","tweety homolog 2 (Drosophila)","protein-coding"]
[603,"chr10",41449839,41451323,"+",0,"NA","intron (NR_102360, intron 1 of 6)","CpG",223,"NR_102360",268294,"Mm.258475","NM_153398","ENSMUSG00000019826","Zbtb24","BC055367|Bif1|Bsg1|ZNF450","zinc finger and BTB domain containing 24","protein-coding"]
[8250,"chr9",13825991,13828546,"+",0,"NA","promoter-TSS (NM_026665)","promoter-TSS (NM_026665)",-161,"NM_026665",74360,"Mm.157212","NM_026665","ENSMUSG00000031922","Cep57","3110002L15Rik|4921510P06Rik|4931428M20Rik|AI467480|Tsp57|mKIAA0092","centrosomal protein 57","protein-coding"]
[8009,"chr8",84912120,84915535,"+",0,"NA","intron (NR_103491, intron 1 of 2)","intron (NR_103491, intron 1 of 2)",492,"NR_103491",100503676,"Mm.437155","NR_103491","ENSMUSG00000003812","Gm38426","-","predicted gene, 38426","ncRNA"]
[5666,"chr4",108999881,109001545,"+",0,"NA","promoter-TSS (NM_146150)","promoter-TSS (NM_146150)",-92,"NM_146150",230598,"Mm.274950","NM_146150","ENSMUSG00000053510","Nrd1","2600011I06Rik|AI875733|NRD-C","nardilysin, N-arginine dibasic convertase, NRD convertase 1","protein-coding"]
[90,"chr1",52231636,52233839,"+",0,"NA","exon (NM_001081081, exon 1 of 18)","exon (NM_001081081, exon 1 of 18)",495,"NM_001081081",14660,"Mm.398608","NM_001081081","ENSMUSG00000026103","Gls","6330442B14|AI314027|B230365M23Rik","glutaminase","protein-coding"]
[4712,"chr2",120976846,120977993,"+",0,"NA","exon (NM_175285, exon 1 of 14)","exon (NM_175285, exon 1 of 14)",357,"NM_175285",96957,"Mm.315212","NM_175285","ENSMUSG00000054484","Tmem62","B830009D23Rik|C77355","transmembrane protein 62","protein-coding"]
[3514,"chr17",34981082,34983737,"+",0,"NA","intron (NM_001204273, intron 1 of 5)","CpG",279,"NM_030597",27756,"Mm.165735","NM_030597","ENSMUSG00000007050","Lsm2","D17H6S56E-2|D17H6S56E2|Dmapl|Dmpkap|G7b|Sm-X5|SmX5|snRNP","LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)","protein-coding"]
[8722,"chr9",120125660,120128353,"+",0,"NA","promoter-TSS (NM_011029)","promoter-TSS (NM_011029)",-760,"NM_011029",16785,"Mm.4071","NM_011029","ENSMUSG00000032518","Rpsa","67kDa|67lr|AL022858|Lamr|Lamr1|Lamrl1|MLR|P40|P40-3|P40-8","ribosomal protein SA","protein-coding"]
[565,"chr10",21991120,21996763,"+",0,"NA","promoter-TSS (NM_011361)","promoter-TSS (NM_011361)",51,"NM_001161850",20393,"Mm.28405","NM_011361","ENSMUSG00000019970","Sgk1","Sgk","serum/glucocorticoid regulated kinase 1","protein-coding"]
[3247,"chr16",91595733,91597656,"+",0,"NA","intron (NM_030018, intron 1 of 6)","intron (NM_030018, intron 1 of 6)",986,"NM_030018",77975,"Mm.290341","NM_030018","ENSMUSG00000022964","Tmem50b","AU015466|AU019872|B230114J08Rik","transmembrane protein 50B","protein-coding"]
[850,"chr10",105841084,105842118,"+",0,"NA","promoter-TSS (NM_207522)","promoter-TSS (NM_207522)",122,"NM_025602",52713,"Mm.339224","NM_025602",null,"Ccdc59","2300004H16Rik|D10Ertd718e","coiled-coil domain containing 59","protein-coding"]
[4997,"chr2",181518867,181522729,"+",0,"NA","intron (NR_073369, intron 1 of 5)","CpG",313,"NM_001271584",13002,"Mm.140761","NM_016775","ENSMUSG00000000826","Dnajc5","2610314I24Rik|AU018536|Csp","DnaJ (Hsp40) homolog, subfamily C, member 5","protein-coding"]
[4683,"chr2",118901668,118902407,"+",0,"NA","intron (NM_001045523, intron 1 of 6)","CpG",422,"NM_001045523",228536,"Mm.330487","NM_001045523","ENSMUSG00000040007","Bahd1","AL022997|AW541238|Gm117|mKIAA0945","bromo adjacent homology domain containing 1","protein-coding"]
[8554,"chr9",83834031,83834831,"+",0,"NA","promoter-TSS (NM_001284272)","promoter-TSS (NM_001284272)",-258,"NM_009445",22137,"Mm.1904","NM_009445","ENSMUSG00000038379","Ttk","AL022661|Esk1|Mps1|PYT|esk","Ttk protein kinase","protein-coding"]
[7986,"chr8",83997524,83998608,"+",0,"NA","exon (NM_001081415, exon 1 of 5)","exon (NM_001081415, exon 1 of 5)",394,"NM_001081415",666704,"Mm.298091","NM_001081415","ENSMUSG00000079003","Samd1","AA589507","sterile alpha motif domain containing 1","protein-coding"]
[4777,"chr2",131233102,131234566,"+",0,"NA","promoter-TSS (NM_001206385)","promoter-TSS (NM_001206385)",-229,"NM_001206383",228607,"Mm.287226","NM_144888","ENSMUSG00000037523","Mavs","D430028G21Rik|IPS-1|Visa|cardif","mitochondrial antiviral signaling protein","protein-coding"]
[11,"chr1",9797786,9801860,"+",0,"NA","intron (NM_177547, intron 1 of 16)","intron (NM_177547, intron 1 of 16)",1693,"NM_177547",170755,"Mm.336410","NM_133220",null,"Sgk3","2510015P22Rik|A330005P07Rik|Cisk|fy|fz","serum/glucocorticoid regulated kinase 3","protein-coding"]
[4117,"chr19",10304596,10304821,"+",0,"NA","intron (NM_198114, intron 1 of 19)","CpG",169,"NM_198114",269060,"Mm.329718","NM_198114","ENSMUSG00000035735","Dagla","Nsddr","diacylglycerol lipase, alpha","protein-coding"]
[7145,"chr7",24970988,24972629,"+",0,"NA","exon (NM_010261, exon 3 of 5)","exon (NM_010261, exon 3 of 5)",920,"NM_010261",14470,"Mm.22473","NM_010261","ENSMUSG00000003380","Rabac1","2310040I06Rik|Gbpap1|PRA1|prenylin","Rab acceptor 1 (prenylated)","protein-coding"]
[7605,"chr7",127209341,127209578,"+",0,"NA","promoter-TSS (NM_144522)","promoter-TSS (NM_144522)",-991,"NM_144522",68449,"Mm.41420","NM_144522","ENSMUSG00000042492","Tbc1d10b","1110003P22Rik|C87963","TBC1 domain family, member 10b","protein-coding"]
[3340,"chr17",23827786,23829747,"+",0,"NA","intron (NM_026305, intron 2 of 3)","CpG",343,"NM_026305",67673,"Mm.153758","NM_026305","ENSMUSG00000055839","Tceb2","0610040H15Rik","transcription elongation factor B (SIII), polypeptide 2","protein-coding"]
[6498,"chr5",135932941,135936002,"+",0,"NA","5' UTR (NM_018871, exon 1 of 2)","5' UTR (NM_018871, exon 1 of 2)",170,"NM_018871",22628,"Mm.233813","NM_018871","ENSMUSG00000051391","Ywhag","14-3-3gamma|D7Bwg1348e","tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide","protein-coding"]
[5960,"chr4",147903870,147907694,"+",0,"NA","promoter-TSS (NM_133201)","promoter-TSS (NM_133201)",-873,"NM_001285921",170731,"Mm.154312","NM_133201","ENSMUSG00000029020","Mfn2","D630023P19Rik|Fzo","mitofusin 2","protein-coding"]
[7121,"chr7",19603341,19604437,"+",0,"NA","intron (NR_125834, intron 1 of 19)","intron (NR_125834, intron 1 of 19)",472,"NR_125835",53609,"Mm.20913","NM_016680","ENSMUSG00000061028","Clasrp","Clasp|Sfrs16|Srsf16|Swap2","CLK4-associating serine/arginine rich protein","protein-coding"]
[199,"chr1",83035808,83039028,"+",0,"NA","intron (NM_030556, intron 1 of 6)","intron (NM_030556, intron 1 of 6)",1030,"NM_030556",80721,"Mm.261542","NM_030556","ENSMUSG00000038496","Slc19a3","A230084E24Rik|AI788884|ThTr2","solute carrier family 19, member 3","protein-coding"]
[4972,"chr2",174463558,174464706,"+",0,"NA","promoter-TSS (NM_025983)","promoter-TSS (NM_025983)",-31,"NM_025983",67126,"Mm.20841","NM_025983","ENSMUSG00000016252","Atp5e","2410043G19Rik|ATPE|AV000645","ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit","protein-coding"]
[6747,"chr6",52639618,52640251,"+",0,"NA","intron (NM_145567, intron 1 of 7)","intron (NM_145567, intron 1 of 7)",366,"NM_145567",58875,"Mm.286458","NM_145567","ENSMUSG00000029776","Hibadh","6430402H10Rik|AI265272","3-hydroxyisobutyrate dehydrogenase","protein-coding"]
[7764,"chr8",13560384,13561605,"+",0,"NA","intron (NM_025601, intron 1 of 8)","intron (NM_025601, intron 1 of 8)",1467,"NM_025601",66501,"Mm.46136","NM_025601","ENSMUSG00000031452","1700029H14Rik","-","RIKEN cDNA 1700029H14 gene","protein-coding"]
[7934,"chr8",71485520,71489247,"+",0,"NA","promoter-TSS (NM_032544)","promoter-TSS (NM_032544)",-720,"NM_032544",70359,"Mm.142112","NM_032544","ENSMUSG00000007610","Gtpbp3","2410009F13Rik|AI607903","GTP binding protein 3","protein-coding"]
[1899,"chr12",84614801,84617989,"+",0,"NA","intron (NM_008992, intron 1 of 18)","B2_Mm1a|SINE|B2",1071,"NM_008992",19300,"Mm.229109","NM_008992","ENSMUSG00000021240","Abcd4","P69r|P70R|Pxmp1l","ATP-binding cassette, sub-family D (ALD), member 4","protein-coding"]
[4606,"chr2",91264275,91266037,"+",0,"NA","promoter-TSS (NM_023854)","promoter-TSS (NM_023854)",41,"NM_023854",77038,"Mm.43636","NM_023854","ENSMUSG00000027255","Arfgap2","2310032E02Rik|Zfp289","ADP-ribosylation factor GTPase activating protein 2","protein-coding"]
[1929,"chr12",100159148,100160011,"+",0,"NA","promoter-TSS (NM_001290303)","promoter-TSS (NM_001290303)",74,"NM_001290303",217827,"Mm.224076","NM_183155","ENSMUSG00000021179","Nrde2","6720454P05Rik","nrde-2 necessary for RNA interference, domain containing","protein-coding"]
[6507,"chr5",136961812,136962732,"+",0,"NA","intron (NM_025562, intron 1 of 4)","intron (NM_025562, intron 1 of 4)",195,"NM_025562",66437,"Mm.25849","NM_025562","ENSMUSG00000019054","Fis1","2010003O14Rik|Ttc11","fission 1 (mitochondrial outer membrane) homolog (yeast)","protein-coding"]
[3223,"chr16",85171859,85174076,"+",0,"NA","intron (NM_007471, intron 1 of 15)","CpG",740,"NM_001198825",11820,"Mm.277585","NM_007471","ENSMUSG00000022892","App","Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp","amyloid beta (A4) precursor protein","protein-coding"]
[3244,"chr16",91464678,91465528,"+",0,"NA","promoter-TSS (NR_077219)","promoter-TSS (NR_077219)",-1,"NR_077219",100503120,"Mm.387130","NR_077219","ENSMUSG00000084866","A930006K02Rik","-","RIKEN cDNA A930006K02 gene","ncRNA"]
[5581,"chr4",62517508,62520423,"+",0,"NA","intron (NM_008525, intron 1 of 11)","intron (NM_008525, intron 1 of 11)",944,"NM_001276446",17025,"Mm.6988","NM_008525","ENSMUSG00000028393","Alad","ALADH|Lv","aminolevulinate, delta-, dehydratase","protein-coding"]
[2280,"chr13",98814411,98816297,"+",0,"NA","promoter-TSS (NM_172591)","promoter-TSS (NM_172591)",95,"NM_172591",218503,"Mm.23928","NM_172591","ENSMUSG00000041685","Fcho2","5832424M12Rik|AA387320","FCH domain only 2","protein-coding"]
[273,"chr1",119648050,119649701,"+",0,"NA","5' UTR (NM_145506, exon 1 of 25)","5' UTR (NM_145506, exon 1 of 25)",125,"NM_001113416",226352,"Mm.253156","NM_145506","ENSMUSG00000026383","Epb41l5","1700030C16Rik|AL022914|BE37|E230025E14Rik|Epb4.1l5|Lulu1|NBL5","erythrocyte membrane protein band 4.1 like 5","protein-coding"]
[8626,"chr9",106475867,106477900,"+",0,"NA","promoter-TSS (NM_145620)","promoter-TSS (NM_145620)",66,"NM_001311150",235587,"Mm.273659","NM_145619","ENSMUSG00000023249","Parp3","A930002C11Rik|AW990611|Adprt3|Adprtl3|PARP-3|pADPRT-3","poly (ADP-ribose) polymerase family, member 3","protein-coding"]
[471,"chr1",182301910,182303145,"+",0,"NA","intron (NR_015458, intron 1 of 1)","intron (NR_015458, intron 1 of 1)",1693,"NR_015458",67330,"Mm.331019","NR_015458","ENSMUSG00000100147","1700047M11Rik","-","RIKEN cDNA 1700047M11 gene","ncRNA"]
[6914,"chr6",116338015,116338405,"+",0,"NA","5' UTR (NM_027920, exon 1 of 7)","5' UTR (NM_027920, exon 1 of 7)",188,"NM_027920",71779,"Mm.27064","NM_027920","ENSMUSG00000025702","2008-03-01","1300017E09Rik|MARCH-VIII|Mir","membrane-associated ring finger (C3HC4) 8","protein-coding"]
[4991,"chr2",181201191,181206101,"+",0,"NA","promoter-TSS (NM_009184)","promoter-TSS (NM_009184)",-857,"NM_009184",20459,"Mm.4497","NM_009184",null,"Ptk6","BRK|Sik|Tksk|tks","PTK6 protein tyrosine kinase 6","protein-coding"]
[2262,"chr13",93772245,93772476,"+",0,"NA","intron (NM_009712, intron 1 of 7)","intron (NM_009712, intron 1 of 7)",681,"NM_009712",11881,"Mm.300178","NM_009712","ENSMUSG00000042082","Arsb","1110007C02Rik|AI480648|As-1|As-1r|As-1s|As-1t|As1|As1-r|As1-s|As1-t|Asr-1|Ast-1","arylsulfatase B","protein-coding"]
[1936,"chr12",101911774,101914090,"+",0,"NA","5' UTR (NM_028446, exon 1 of 21)","5' UTR (NM_028446, exon 1 of 21)",239,"NM_028446",109181,"Mm.208618","NM_028446","ENSMUSG00000021188","Trip11","2610511G22Rik|3110031G15Rik|6030460N08Rik|AI450776|GMAP-210|TRIP230","thyroid hormone receptor interactor 11","protein-coding"]
[7089,"chr7",16308567,16314574,"+",0,"NA","intron (NM_133234, intron 1 of 3)","intron (NM_133234, intron 1 of 3)",1987,"NM_133234",170770,"Mm.7660","NM_133234","ENSMUSG00000002083","Bbc3","PUMA|PUMA/JFY1","BCL2 binding component 3","protein-coding"]
[2912,"chr15",97784419,97785007,"+",0,"NA","intron (NM_026353, intron 1 of 2)","CpG",348,"NM_026353",67739,"Mm.28955","NM_026353","ENSMUSG00000081534","Slc48a1","4930570C03Rik","solute carrier family 48 (heme transporter), member 1","protein-coding"]
[131,"chr1",59912407,59914559,"+",0,"NA","exon (NM_001037725, exon 1 of 8)","exon (NM_001037725, exon 1 of 8)",477,"NM_001037725",72750,"Mm.258250","NM_001037725","ENSMUSG00000041040","Fam117b","2810425F24Rik|6330416D14Rik|Als2cr13","family with sequence similarity 117, member B","protein-coding"]
[7686,"chr7",141131329,141131665,"+",0,"NA","exon (NM_013782, exon 1 of 12)","exon (NM_013782, exon 1 of 12)",211,"NM_013782",27388,"Mm.293591","NM_013782",null,"Ptdss2","AI481134|AI988017|PSS2","phosphatidylserine synthase 2","protein-coding"]
[7119,"chr7",19561087,19562885,"+",0,"NA","exon (NM_199149, exon 1 of 13)","exon (NM_199149, exon 1 of 13)",412,"NM_199149",232947,"Mm.219662","NM_199149","ENSMUSG00000051403","Ppp1r37","Gm158|Lrrc68","protein phosphatase 1, regulatory subunit 37","protein-coding"]
[1565,"chr11",106487144,106488182,"+",0,"NA","exon (NM_023913, exon 1 of 22)","exon (NM_023913, exon 1 of 22)",133,"NM_023913",78943,"Mm.340943","NM_023913",null,"Ern1","9030414B18Rik|AI225830|C85377|Ire1a|Ire1alpha|Ire1p","endoplasmic reticulum (ER) to nucleus signalling 1","protein-coding"]
[6016,"chr4",155361069,155362000,"+",0,"NA","promoter-TSS (NM_008860)","promoter-TSS (NM_008860)",-106,"NM_008860",18762,"Mm.28561","NM_008860","ENSMUSG00000029053","Prkcz","AI098070|C80388|Pkcz|R74924|aPKCzeta|nPKC-zeta|zetaPKC","protein kinase C, zeta","protein-coding"]
[1872,"chr12",80789739,80793404,"+",0,"NA","intron (NM_178682, intron 1 of 5)","intron (NM_178682, intron 1 of 5)",1039,"NM_001242419",217684,"Mm.341776","NM_178682","ENSMUSG00000021133","Susd6","4933426M11Rik|mKIAA0247","sushi domain containing 6","protein-coding"]
[7991,"chr8",84180732,84181022,"+",0,"NA","Intergenic","Intergenic",-1916,"NR_029821",723819,null,"NR_029821","ENSMUSG00000065483","Mir181c","Mirn181c|mir-181c","microRNA 181c","ncRNA"]
[7097,"chr7",16874428,16875575,"+",0,"NA","promoter-TSS (NM_001081655)","promoter-TSS (NM_001081655)",-316,"NM_001081655",629378,"Mm.491123","NM_001081655","ENSMUSG00000078794","Dact3","EG666671|naa-3","dapper homolog 3, antagonist of beta-catenin (xenopus)","protein-coding"]
[6708,"chr6",41635852,41636693,"+",0,"NA","5' UTR (NM_022413, exon 1 of 15)","5' UTR (NM_022413, exon 1 of 15)",133,"NM_022413",64177,"Mm.296889","NM_022413","ENSMUSG00000029868","Trpv6","CAT|CaT1|Cac|Ecac2|Otrpc3","transient receptor potential cation channel, subfamily V, member 6","protein-coding"]
[7489,"chr7",102222116,102225985,"+",0,"NA","intron (NR_111938, intron 2 of 4)","MIR3|SINE|MIR",1022,"NR_111937",233575,"Mm.302013","NM_145583","ENSMUSG00000030990","Pgap2","1810006G21Rik|C76649|Frag1","post-GPI attachment to proteins 2","protein-coding"]
[3875,"chr18",46596268,46599749,"+",0,"NA","promoter-TSS (NM_025698)","promoter-TSS (NM_025698)",304,"NM_010120",13664,"Mm.262037","NM_010120","ENSMUSG00000057561","Eif1a","C76390|Ef1a|Eftu|Eif4c|eIF-1A|eIF-4C","eukaryotic translation initiation factor 1A","protein-coding"]
[2513,"chr14",57744937,57746727,"+",0,"NA","intron (NM_015771, intron 1 of 7)","CpG",291,"NM_015771",50523,"Mm.347899","NM_015771","ENSMUSG00000021959","Lats2","4932411G09Rik|AV277261|AW228608","large tumor suppressor 2","protein-coding"]
[37,"chr1",33757556,33758633,"+",0,"NA","promoter-TSS (NM_145392)","promoter-TSS (NM_145392)",-344,"NM_145392",213539,"Mm.247037","NM_145392","ENSMUSG00000042215","Bag2","2610042A13Rik|BC016230","BCL2-associated athanogene 2","protein-coding"]
[6416,"chr5",122778705,122779849,"+",0,"NA","5' UTR (NM_001199676, exon 1 of 17)","5' UTR (NM_001199676, exon 1 of 17)",133,"NM_001199676",207565,"Mm.289237","NM_145358","ENSMUSG00000029471","Camkk2","6330570N16Rik|AW061083|mKIAA0787","calcium/calmodulin-dependent protein kinase kinase 2, beta","protein-coding"]
[855,"chr10",111009789,111010957,"+",0,"NA","promoter-TSS (NM_172554)","promoter-TSS (NM_172554)",-307,"NM_172554",320150,"Mm.339281","NM_172554","ENSMUSG00000035798","Zdhhc17","A230053P19Rik|BB187739|D130071N24Rik|Hip14","zinc finger, DHHC domain containing 17","protein-coding"]
[3659,"chr17",57030451,57031491,"+",0,"NA","intron (NM_010613, intron 1 of 17)","intron (NM_010613, intron 1 of 17)",536,"NM_010613",16549,"Mm.34296","NM_010613","ENSMUSG00000007670","Khsrp","6330409F21Rik|Fbp2|Fubp2|Ksrp","KH-type splicing regulatory protein","protein-coding"]
[6269,"chr5",93092671,93094331,"+",0,"NA","promoter-TSS (NM_001009818)","promoter-TSS (NM_001009818)",85,"NM_001310671",52398,"Mm.394184","NM_001009818","ENSMUSG00000058013","2011-09-01","6230410I01Rik|AW548875|D5Ertd606e","septin 11","protein-coding"]
[1839,"chr12",73286386,73287467,"+",0,"NA","promoter-TSS (NM_029580)","promoter-TSS (NM_029580)",78,"NM_001037717",625098,"Mm.32075","NM_001037717","ENSMUSG00000044712","Slc38a6","AW322671|EG625098","solute carrier family 38, member 6","protein-coding"]
[1788,"chr12",54795095,54796055,"+",0,"NA","promoter-TSS (NM_026998)","promoter-TSS (NM_026998)",87,"NM_026998",72183,"Mm.28240","NM_026998","ENSMUSG00000005656","Snx6","2010006G21Rik|2610032J07Rik|2810425K19Rik|AU018928|C85963","sorting nexin 6","protein-coding"]
[2186,"chr13",64152005,64156352,"+",0,"NA","promoter-TSS (NM_175494)","promoter-TSS (NM_175494)",-979,"NM_175494",238673,"Mm.300065","NM_175494","ENSMUSG00000044934","Zfp367","8030486J21Rik|ZFF29a|ZFF29b|Znf367","zinc finger protein 367","protein-coding"]
[680,"chr10",67126649,67127712,"+",0,"NA","promoter-TSS (NM_207221)","promoter-TSS (NM_207221)",-78,"NM_207221",108829,"Mm.23846","NM_207221","ENSMUSG00000037876","Jmjd1c","5430433L24Rik|D630035I23Rik|Jmjdic|TRIP8","jumonji domain containing 1C","protein-coding"]
[8826,"chrX",48622704,48623926,"+",0,"NA","promoter-TSS (NM_001290705)","promoter-TSS (NM_001290705)",-263,"NM_001290703",20523,"Mm.34953","NM_011398","ENSMUSG00000031105","Slc25a14","BMCP1|UCP5|UCP5L|UCP5S","solute carrier family 25 (mitochondrial carrier, brain), member 14","protein-coding"]
[8599,"chr9",101249010,101252866,"+",0,"NA","intron (NM_001161362, intron 1 of 13)","intron (NM_001161362, intron 1 of 13)",894,"NM_001161362",235542,"Mm.335386","NM_172144","ENSMUSG00000043154","Ppp2r3a","3222402P14Rik|A730042E07","protein phosphatase 2, regulatory subunit B'', alpha","protein-coding"]
[3962,"chr18",80150660,80151738,"+",0,"NA","intron (NM_175028, intron 1 of 3)","CpG",283,"NM_175028",240442,"Mm.26594","NM_175028","ENSMUSG00000053950","Adnp2","8430420L05Rik|BC024969|Kiaa0863|Zfp508|mKIAA0863","ADNP homeobox 2","protein-coding"]
[7346,"chr7",56019107,56019533,"+",0,"NA","intron (NM_153578, intron 1 of 4)","CpG",253,"NM_153578",233280,"Mm.389901","NM_153578",null,"Nipa1","1110027G09Rik|A830014A18Rik|FSP3|Spg6","non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)","protein-coding"]
[7876,"chr8",64732040,64734018,"+",0,"NA","intron (NM_025436, intron 1 of 5)","intron (NM_025436, intron 1 of 5)",549,"NM_025436",66234,"Mm.30119","NM_025436","ENSMUSG00000031604","Msmo1","1500001G16Rik|C78600|DESP4|ERG25|Sc4mol","methylsterol monoxygenase 1","protein-coding"]
[7259,"chr7",35646477,35647399,"+",0,"NA","intron (NM_019746, intron 1 of 5)","CpG",544,"NM_019746",56330,"Mm.371609","NM_019746","ENSMUSG00000030417","Pdcd5","2200003D22Rik|AA408513|Tfar19","programmed cell death 5","protein-coding"]
[2783,"chr15",76476833,76478223,"+",0,"NA","promoter-TSS (NM_008296)","promoter-TSS (NM_008296)",83,"NM_008296",15499,"Mm.347444","NM_008296","ENSMUSG00000022556","Hsf1","AA960185|Hsf1alpha|Hsf1beta","heat shock factor 1","protein-coding"]
[334,"chr1",144003837,144005282,"+",0,"NA","promoter-TSS (NM_009061)","promoter-TSS (NM_009061)",-410,"NM_009061",19735,"Mm.28262","NM_009061","ENSMUSG00000026360","Rgs2","GOS8","regulator of G-protein signaling 2","protein-coding"]
[7735,"chr8",3586047,3588917,"+",0,"NA","promoter-TSS (NM_027171)","promoter-TSS (NM_027171)",32,"NM_001163749",69697,"Mm.390010","NM_027171","ENSMUSG00000044433","Camsap3","2310057J16Rik|Kiaa1543|Nezha","calmodulin regulated spectrin-associated protein family, member 3","protein-coding"]
[2292,"chr13",100743216,100745186,"+",0,"NA","intron (NM_001190264, intron 1 of 3)","CpG",458,"NM_001190264",66128,"Mm.306173","NM_025369","ENSMUSG00000061474","Mrps36","1110018B13Rik|S36mt","mitochondrial ribosomal protein S36","protein-coding"]
[3582,"chr17",46110767,46111479,"+",0,"NA","exon (NM_026768, exon 1 of 6)","exon (NM_026768, exon 1 of 6)",119,"NM_026768",68565,"Mm.287443","NM_026768","ENSMUSG00000023967","Mrps18a","1110004O20Rik|C79712","mitochondrial ribosomal protein S18A","protein-coding"]
[1997,"chr12",118300526,118302788,"+",0,"NA","promoter-TSS (NM_001166385)","promoter-TSS (NM_001166385)",-217,"NM_001166385",20688,"Mm.34699","NM_009239",null,"Sp4","5730497N03Rik|HF-1b|HF1-b","trans-acting transcription factor 4","protein-coding"]
[6650,"chr6",18848084,18849600,"+",0,"NA","intron (NM_133939, intron 1 of 3)","G-rich|Low_complexity|Low_complexity",207,"NM_133939",76522,"Mm.275158","NM_133939","ENSMUSG00000044155","Lsm8","2010003I05Rik|AW214405|Naa38","LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)","protein-coding"]
[6888,"chr6",112695942,112697095,"+",0,"NA","intron (NM_021385, intron 1 of 11)","CpG",152,"NM_021385",58186,"Mm.103812","NM_021385","ENSMUSG00000030254","Rad18","2810024C04Rik|Rad18sc","RAD18 E3 ubiquitin protein ligase","protein-coding"]
[5256,"chr3",96705643,96708506,"+",0,"NA","intron (NM_030094, intron 5 of 7)","intron (NM_030094, intron 5 of 7)",1486,"NM_001162925",78373,"Mm.423186","NM_030094","ENSMUSG00000028100","Nudt17","2410015C20Rik","nudix (nucleoside diphosphate linked moiety X)-type motif 17","protein-coding"]
[8400,"chr9",52047470,52049223,"+",0,"NA","5' UTR (NM_009041, exon 1 of 14)","5' UTR (NM_009041, exon 1 of 14)",359,"NR_023357",629557,"Mm.422775","NR_023357",null,"Gm6981","EG629557","glyceraldehyde-3-phosphate dehydrogenase pseudogene","pseudo"]
[1680,"chr11",120597755,120598938,"+",0,"NA","promoter-TSS (NM_001038230)","promoter-TSS (NM_001038230)",19,"NM_011568",21681,"Mm.1886","NM_011568",null,"Alyref","ALY|REF1|Refbp1|Thoc4","Aly/REF export factor","protein-coding"]
[2879,"chr15",85859171,85859899,"+",0,"NA","promoter-TSS (NM_001168672)","promoter-TSS (NM_001168672)",-172,"NM_001168672",29870,"Mm.20858","NM_013882","ENSMUSG00000022385","Gtse1","B99|Gtse-1","G two S phase expressed protein 1","protein-coding"]
[5984,"chr4",149954614,149954930,"+",0,"NA","intron (NM_029035, intron 1 of 2)","CpG",234,"NM_029035",74646,"Mm.30","NM_029035","ENSMUSG00000039911","Spsb1","1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1","splA/ryanodine receptor domain and SOCS box containing 1","protein-coding"]
[5847,"chr4",132842342,132843670,"+",0,"NA","intron (NM_001290725, intron 1 of 6)","intron (NM_001290725, intron 1 of 6)",163,"NM_001290725",100336,"Mm.105230","NM_146154","ENSMUSG00000028882","Ppp1r8","6330548N22Rik|AU044684|NIPP1","protein phosphatase 1, regulatory (inhibitor) subunit 8","protein-coding"]
[4043,"chr19",5725119,5729883,"+",0,"NA","TTS (NM_023166)","TTS (NM_023166)",-1184,"NM_053252",114601,"Mm.210447","NM_053252","ENSMUSG00000024937","Ehbp1l1","G430002G23Rik","EH domain binding protein 1-like 1","protein-coding"]
[5995,"chr4",151994915,151997432,"+",0,"NA","promoter-TSS (NM_172705)","promoter-TSS (NM_172705)",6,"NM_172705",230936,"Mm.25582","NM_172705","ENSMUSG00000047777","Phf13","BC029632|Phf5|SPOC1","PHD finger protein 13","protein-coding"]
[2454,"chr14",51143514,51148407,"+",0,"NA","intron (NM_011271, intron 1 of 1)","intron (NM_011271, intron 1 of 1)",807,"NM_011271",19752,"Mm.235538","NM_011271","ENSMUSG00000035896","Rnase1","AI574248|Rib-1|Rib1","ribonuclease, RNase A family, 1 (pancreatic)","protein-coding"]
[2077,"chr13",34651206,34653041,"+",0,"NA","promoter-TSS (NR_105041)","promoter-TSS (NR_105041)",558,"NM_025831",66895,"Mm.28943","NM_025831","ENSMUSG00000021411","Pxdc1","1300014I06Rik","PX domain containing 1","protein-coding"]
[2036,"chr13",21716298,21717398,"+",0,"NA","promoter-TSS (NM_178199)","promoter-TSS (NM_178199)",436,"NM_178182",319191,"Mm.14767","NM_178182","ENSMUSG00000071516","Hist1h2ai","H2a-291A","histone cluster 1, H2ai","protein-coding"]
[8452,"chr9",59352598,59353762,"+",0,"NA","intron (NM_175325, intron 1 of 15)","intron (NM_175325, intron 1 of 15)",328,"NM_175325",102774,"Mm.200714","NM_175325","ENSMUSG00000025235","Bbs4","AW537059|AW742241|D9Ertd464e","Bardet-Biedl syndrome 4 (human)","protein-coding"]
[7833,"chr8",40307496,40308441,"+",0,"NA","promoter-TSS (NM_030110)","promoter-TSS (NM_030110)",-39,"NR_106126",102466237,null,"NR_106126","ENSMUSG00000098431","Mir7666","Gm27915|mmu-mir-7666","microRNA 7666","ncRNA"]
[5588,"chr4",63744792,63745239,"+",0,"NA","promoter-TSS (NM_177371)","promoter-TSS (NM_177371)",98,"NM_177371",326623,"Mm.208152","NM_177371",null,"Tnfsf15","Tl1|Tl1a|Vegi","tumor necrosis factor (ligand) superfamily, member 15","protein-coding"]
[8468,"chr9",62980168,62980859,"+",0,"NA","intron (NM_019663, intron 1 of 13)","CpG",366,"NM_019663",56469,"Mm.431253","NM_019663","ENSMUSG00000032405","Pias1","2900068C24Rik|Ddxbp1|GBP","protein inhibitor of activated STAT 1","protein-coding"]
[1552,"chr11",105126069,105126738,"+",0,"NA","promoter-TSS (NM_172567)","promoter-TSS (NM_172567)",-22,"NM_172567",52686,"Mm.270091","NM_172567",null,"Mettl2","2810438F06Rik|AW493404|C130031G21Rik|D11Ertd768e|METL|PSENIP1","methyltransferase like 2","protein-coding"]
[1194,"chr11",62879073,62880048,"+",0,"NA","promoter-TSS (NM_026210)","promoter-TSS (NM_026210)",70,"NM_026210",67510,"Mm.9806","NM_026210","ENSMUSG00000014177","Tvp23b","1810036I24Rik|Fam18b|Fam18b1","trans-golgi network vesicle protein 23B","protein-coding"]
[7271,"chr7",43312645,43313224,"+",0,"NA","intron (NM_027264, intron 1 of 4)","CpG",327,"NM_027264",69930,"Mm.45367","NM_027264","ENSMUSG00000012640","Zfp715","2610041B18Rik|mszf15","zinc finger protein 715","protein-coding"]
[4433,"chr2",30171264,30172383,"+",0,"NA","exon (NM_007931, exon 1 of 3)","exon (NM_007931, exon 1 of 3)",299,"NM_007931",13804,"Mm.474473","NM_007931","ENSMUSG00000015337","Endog","-","endonuclease G","protein-coding"]
[41,"chr1",34842102,34843876,"+",0,"NA","promoter-TSS (NM_001160236)","promoter-TSS (NM_001160236)",61,"NM_001160235",214469,"Mm.120151","NM_174997","ENSMUSG00000037503","Fam168b","mKIAA4042","family with sequence similarity 168, member B","protein-coding"]
[8934,"chrX",137049737,137049894,"+",0,"NA","5' UTR (NM_146261, exon 1 of 6)","5' UTR (NM_146261, exon 1 of 6)",221,"NM_146261",245622,"Mm.260106","NM_146261","ENSMUSG00000042595","Fam199x","-","family with sequence similarity 199, X-linked","protein-coding"]
[3084,"chr16",20651018,20652398,"+",0,"NA","promoter-TSS (NR_027485)","promoter-TSS (NR_027485)",56,"NM_134101",21762,"Mm.243234","NM_134101","ENSMUSG00000006998","Psmd2","9430095H01Rik|AA407121|TEG-190|Tex190","proteasome (prosome, macropain) 26S subunit, non-ATPase, 2","protein-coding"]
[2887,"chr15",88861458,88865534,"+",0,"NA","exon (NM_145478, exon 4 of 6)","exon (NM_145478, exon 4 of 6)",1302,"NM_145478",223775,"Mm.400129","NM_145478","ENSMUSG00000035828","Pim3","BC026639|Kid1","proviral integration site 3","protein-coding"]
[2223,"chr13",73763096,73764565,"+",0,"NA","exon (NM_011390, exon 1 of 24)","exon (NM_011390, exon 1 of 24)",133,"NM_011390",20499,"Mm.275800","NM_011390","ENSMUSG00000017756","Slc12a7","AA408796|D13Ertd261e|Kcc4","solute carrier family 12, member 7","protein-coding"]
[8502,"chr9",66974882,66975753,"+",0,"NA","exon (NM_030717, exon 1 of 6)","exon (NM_030717, exon 1 of 6)",167,"NM_030717",80907,"Mm.157882","NM_030717","ENSMUSG00000032370","Lactb","LACT-1|Lact1|Mrpl56","lactamase, beta","protein-coding"]
[3532,"chr17",35534054,35535227,"+",0,"NA","TTS (NM_020576)","TTS (NM_020576)",1439,"NM_020576",57390,"Mm.34201","NM_020576","ENSMUSG00000024409","Psors1c2","AI448740|Pcg|SPR1","psoriasis susceptibility 1 candidate 2 (human)","protein-coding"]
[3380,"chr17",25309193,25309790,"+",0,"NA","intron (NM_053259, intron 2 of 5)","intron (NM_053259, intron 2 of 5)",845,"NM_053259",114661,"Mm.207081","NM_053259","ENSMUSG00000024171","Prss28","Isp1|mIsp-1","protease, serine 28","protein-coding"]
[4292,"chr19",57272120,57275393,"+",0,"NA","promoter-TSS (NR_045319)","promoter-TSS (NR_045319)",-204,"NR_045319",78120,"Mm.445892","NR_045319",null,"4930449E18Rik","-","RIKEN cDNA 4930449E18 gene","ncRNA"]
[1097,"chr11",51605298,51607540,"+",0,"NA","exon (NM_001048061, exon 2 of 8)","exon (NM_001048061, exon 2 of 8)",462,"NM_001048061",15384,"Mm.256875","NM_010448","ENSMUSG00000020358","Hnrnpab","3010025C11Rik|CBF-A|Cgbfa|Hnrpab","heterogeneous nuclear ribonucleoprotein A/B","protein-coding"]
[5964,"chr4",148139740,148140999,"+",0,"NA","promoter-TSS (NM_027985)","promoter-TSS (NM_027985)",-121,"NM_027985",71890,"Mm.9648","NM_027985","ENSMUSG00000029003","Mad2l2","2310033C13Rik|G1-453-4|MAD2B|REV7|repro22","MAD2 mitotic arrest deficient-like 2","protein-coding"]
[838,"chr10",95514372,95516133,"+",0,"NA","promoter-TSS (NM_080560)","promoter-TSS (NM_080560)",90,"NM_080560",93765,"Mm.371667","NM_080560","ENSMUSG00000074781","Ube2n","1500026J17Rik|AL022654|BB101821|UBC13","ubiquitin-conjugating enzyme E2N","protein-coding"]
[2664,"chr15",25932643,25934010,"+",0,"NA","promoter-TSS (NM_001277318)","promoter-TSS (NM_001277318)",-226,"NM_001277318",66270,"Mm.25311","NM_025459","ENSMUSG00000022270","Fam134b","1810015C04Rik|AU015349","family with sequence similarity 134, member B","protein-coding"]
[8187,"chr8",121107908,121108711,"+",0,"NA","promoter-TSS (NM_172761)","promoter-TSS (NM_172761)",70,"NM_172761",234814,"Mm.31690","NM_172761","ENSMUSG00000031816","Mthfsd","AW049977|BC052066|C920004D05","methenyltetrahydrofolate synthetase domain containing","protein-coding"]
[8461,"chr9",61913729,61915179,"+",0,"NA","promoter-TSS (NM_018853)","promoter-TSS (NM_018853)",56,"NM_018853",56040,"Mm.3158","NM_018853","ENSMUSG00000007892","Rplp1","2410042H16Rik|Arpp1|C430017H15Rik","ribosomal protein, large, P1","protein-coding"]
[5019,"chr3",16182889,16184576,"+",0,"NA","intron (NR_027375, intron 1 of 5)","CpG",549,"NM_001145919",229096,"Mm.23834","NM_172677","ENSMUSG00000047213","Ythdf3","9130022A11Rik","YTH domain family 3","protein-coding"]
[1121,"chr11",53768552,53770797,"+",0,"NA","promoter-TSS (NM_001159393)","promoter-TSS (NM_001159393)",-340,"NM_001159393",16362,"Mm.105218","NM_008390","ENSMUSG00000018899","Irf1","AU020929|Irf-1","interferon regulatory factor 1","protein-coding"]
[8081,"chr8",105170118,105172326,"+",0,"NA","intron (NM_022309, intron 1 of 5)","CpG",548,"NM_001161458",12400,"Mm.2018","NM_022309","ENSMUSG00000031885","Cbfb","AI893578|PEA2|PEBP2b|Pebp2|Pebpb2","core binding factor beta","protein-coding"]
[4245,"chr19",45363945,45364278,"+",0,"NA","intron (NM_009771, intron 1 of 13)","intron (NM_009771, intron 1 of 13)",377,"NM_001037758",12234,"Mm.119717","NM_009771","ENSMUSG00000025217","Btrc","Beta-Trcp1|E3RS-IkappaB|E3RSIkappaB|FWD1|Fbw1a|HOS|Slimb|b-TrCP|beta-TrCP","beta-transducin repeat containing protein","protein-coding"]
[6493,"chr5",135632754,135633176,"+",0,"NA","intron (NM_146002, intron 1 of 3)","CpG",311,"NM_146002",215160,"Mm.295438","NM_031398","ENSMUSG00000039917","Rhbdd2","0610011L13Rik|AI480532|Rhbdl7|Usmg1","rhomboid domain containing 2","protein-coding"]
[896,"chr10",127030572,127030746,"+",0,"NA","intron (NM_025537, intron 1 of 5)","CpG",155,"NM_025537",66399,"Mm.29900","NM_025537","ENSMUSG00000040521","Tsfm","2310050B20Rik|9430024O13Rik|EF-TS|EF-Tsmt","Ts translation elongation factor, mitochondrial","protein-coding"]
[3530,"chr17",35378797,35380294,"+",0,"NA","promoter-TSS (NM_001143689)","promoter-TSS (NM_001143689)",-72,"NM_001143689",15015,"Mm.464284","NM_001143689","ENSMUSG00000035929","H2-Q4","H-2Q4|H2-Gs10|Qa-4|Qa4|Qat-4|Qb-1|Qb1","histocompatibility 2, Q region locus 4","protein-coding"]
[5539,"chr4",46488947,46489886,"+",0,"NA","promoter-TSS (NM_053179)","promoter-TSS (NM_053179)",87,"NM_053179",94181,"Mm.249349","NM_053179","ENSMUSG00000028334","Nans","4632418E04Rik|BB056474|Sas","N-acetylneuraminic acid synthase (sialic acid synthase)","protein-coding"]
[3672,"chr17",65782169,65784560,"+",0,"NA","promoter-TSS (NR_104465)","promoter-TSS (NR_104465)",9,"NR_104465",70351,"Mm.48686","NM_146081","ENSMUSG00000061950","Ppp4r1","3110001J10Rik|Pp4r1","protein phosphatase 4, regulatory subunit 1","protein-coding"]
[8143,"chr8",111056391,111057620,"+",0,"NA","exon (NM_028274, exon 1 of 1)","exon (NM_028274, exon 1 of 1)",666,"NM_028274",72544,"Mm.24174","NM_028274",null,"Exosc6","2610510N21Rik|C76919|Mtr3","exosome component 6","protein-coding"]
[6470,"chr5",130221859,130222942,"+",0,"NA","promoter-TSS (NM_027854)","promoter-TSS (NM_027854)",65,"NM_027854",71667,"Mm.258508","NM_027854","ENSMUSG00000053094","Tmem248","0610007L01Rik|A930023A16Rik|AW557951|G430067H08Rik","transmembrane protein 248","protein-coding"]
[4310,"chr2",3424148,3424648,"+",0,"NA","intron (NM_001302674, intron 1 of 13)","intron (NM_001302674, intron 1 of 13)",267,"NM_001302684",227525,"Mm.23483","NM_146114","ENSMUSG00000026648","Dclre1c","9930121L06Rik|AI661365|Art|Snm1l","DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)","protein-coding"]
[5045,"chr3",35931733,35933611,"+",0,"NA","promoter-TSS (NM_001205362)","promoter-TSS (NM_001205362)",294,"NM_001205361",114893,"Mm.374810","NM_033623","ENSMUSG00000027708","Dcun1d1","Rp42|SCCRO|Tes3|pTes3","DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)","protein-coding"]
[3609,"chr17",47501456,47502696,"+",0,"NA","intron (NM_022015, intron 1 of 8)","intron (NM_022015, intron 1 of 8)",211,"NM_022015",63856,"Mm.275901","NM_022015","ENSMUSG00000023980","Taf8","AW260255|Tbn","TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq","protein-coding"]
[2786,"chr15",76607222,76607476,"+",0,"NA","exon (NM_001164173, exon 1 of 37)","exon (NM_001164173, exon 1 of 37)",242,"NM_053193",94230,"Mm.45141","NM_053193","ENSMUSG00000034022","Cpsf1","-","cleavage and polyadenylation specific factor 1","protein-coding"]
[1672,"chr11",120436775,120437724,"+",0,"NA","intron (NM_001195023, intron 1 of 16)","CpG",451,"NM_001195023",217365,"Mm.309520","NM_199469","ENSMUSG00000039703","Nploc4","AK129375|Npl4|mKIAA1499","nuclear protein localization 4 homolog (S. cerevisiae)","protein-coding"]
[2325,"chr13",117023651,117026202,"+",0,"NA","intron (NM_001081009, intron 2 of 26)","CpG",590,"NM_001081009",52552,"Mm.274466","NM_027272","ENSMUSG00000021725","Parp8","2810430O08Rik|ARTD16|D13Ertd275e","poly (ADP-ribose) polymerase family, member 8","protein-coding"]
[6225,"chr5",73292784,73293753,"+",0,"NA","intron (NM_001159887, intron 1 of 7)","intron (NM_001159887, intron 1 of 7)",474,"NM_001159888",68095,"Mm.247039","NM_023429","ENSMUSG00000029152","Ociad1","6030432N09Rik|AI481327|AW557942|Asrij|B230209J16Rik|BB021357|Emi2|Imi2|OCIA|TPA018","OCIA domain containing 1","protein-coding"]
[4924,"chr2",164784910,164787420,"+",0,"NA","exon (NM_133924, exon 1 of 3)","exon (NM_133924, exon 1 of 3)",144,"NM_133924",101113,"Mm.295647","NM_133924",null,"Snx21","5730407K14Rik|AI481716","sorting nexin family member 21","protein-coding"]
[3941,"chr18",73702703,73704222,"+",0,"NA","5' UTR (NM_008540, exon 1 of 12)","5' UTR (NM_008540, exon 1 of 12)",279,"NM_008540",17128,"Mm.100399","NM_008540","ENSMUSG00000024515","Smad4","AW743858|D18Wsu70e|DPC4|Madh4","SMAD family member 4","protein-coding"]
[2768,"chr15",76068861,76071569,"+",0,"NA","promoter-TSS (NM_134089)","promoter-TSS (NM_134089)",-431,"NM_001310542",105782,"Mm.25568","NM_134089","ENSMUSG00000022568","Scrib","AI118201|CRIB|Crc|SCRIB1|Scrb1|mKIAA0147|vartul","scribbled homolog (Drosophila)","protein-coding"]
[562,"chr10",20951699,20953161,"+",0,"NA","promoter-TSS (NM_026203)","promoter-TSS (NM_026203)",-117,"NM_026203",52906,"Mm.253280","NM_026203","ENSMUSG00000019986","Ahi1","1700015F03Rik|Ahi-1|D10Bwg0629e","Abelson helper integration site 1","protein-coding"]
[2269,"chr13",95618236,95618644,"+",0,"NA","promoter-TSS (NM_010169)","promoter-TSS (NM_010169)",-7,"NM_010169",14062,"Mm.24816","NM_010169","ENSMUSG00000048376","F2r","AI482343|Cf2r|Par1|ThrR","coagulation factor II (thrombin) receptor","protein-coding"]
[1102,"chr11",51755403,51758609,"+",0,"NA","promoter-TSS (NM_175255)","promoter-TSS (NM_175255)",-172,"NM_175255",77371,"Mm.33878","NM_175255","ENSMUSG00000036391","Sec24a","-","Sec24 related gene family, member A (S. cerevisiae)","protein-coding"]
[7027,"chr6",148895754,148896392,"+",0,"NA","5' UTR (NM_181541, exon 1 of 19)","5' UTR (NM_181541, exon 1 of 19)",164,"NM_001301351",232560,"Mm.150568","NM_181541","ENSMUSG00000030309","Caprin2","C1qdc1|Eeg1|rng140","caprin family member 2","protein-coding"]
[6481,"chr5",134637683,134639958,"+",0,"NA","intron (NM_001312867, intron 1 of 5)","CpG",589,"NM_001312867",22384,"Mm.27955","NM_033561","ENSMUSG00000040731","Eif4h","AU018978|D5Ertd355e|E430026L18Rik|Ef4h|Wbscr1|Wscr1|eIF-4H","eukaryotic translation initiation factor 4H","protein-coding"]
[1478,"chr11",99229800,99231277,"+",0,"NA","5' UTR (NM_020618, exon 1 of 11)","5' UTR (NM_020618, exon 1 of 11)",479,"NM_020618",57376,"Mm.379086","NM_020618","ENSMUSG00000037935","Smarce1","2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27","SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1","protein-coding"]
[2541,"chr14",65097044,65098452,"+",0,"NA","intron (NM_018788, intron 1 of 6)","CpG",358,"NM_018788",54616,"Mm.103748","NM_018788","ENSMUSG00000021978","Extl3","2900009G18Rik|AU040105|Ext1l|mKIAA0519","exostoses (multiple)-like 3","protein-coding"]
[439,"chr1",175880490,175881003,"+",0,"NA","promoter-TSS (NM_012012)","promoter-TSS (NM_012012)",-32,"NM_012012",26909,"Mm.283046","NM_012012",null,"Exo1","5730442G03Rik|Msa","exonuclease 1","protein-coding"]
[5846,"chr4",132768347,132768762,"+",0,"NA","intron (NM_011284, intron 1 of 8)","CpG",194,"NM_011284",19891,"Mm.2870","NM_011284","ENSMUSG00000028884","Rpa2","AA409079|AI325195|AU020965|RPA34|Rf-A2","replication protein A2","protein-coding"]
[2607,"chr14",103069341,103071631,"+",0,"NA","intron (NM_001033242, intron 1 of 3)","CpG",270,"NM_001033242",211286,"Mm.295289","NM_001033242","ENSMUSG00000022125","Cln5","A730075N08Rik","ceroid-lipofuscinosis, neuronal 5","protein-coding"]
[8676,"chr9",108987556,108988114,"+",0,"NA","TTS (NM_145077)","TTS (NM_145077)",1672,"NM_145077",171530,"Mm.388865","NM_145077","ENSMUSG00000049699","Ucn2","Ucn II|Ucn-2|ucn-II","urocortin 2","protein-coding"]
[3345,"chr17",24151841,24153051,"+",0,"NA","Intergenic","Intergenic",-1524,"NM_001286662",18607,"Mm.10504","NM_011062","ENSMUSG00000024122","Pdpk1","Pdk1","3-phosphoinositide dependent protein kinase 1","protein-coding"]
[4839,"chr2",152343326,152344020,"+",0,"NA","intron (NM_175093, intron 1 of 3)","(GA)n|Simple_repeat|Simple_repeat",387,"NM_175093",228775,"Mm.276018","NM_144554","ENSMUSG00000032715","Trib3","Ifld2|Nipk|SINK|SKIP3|TRB-3|Trb3","tribbles homolog 3 (Drosophila)","protein-coding"]
[4374,"chr2",25235845,25244772,"+",0,"NA","promoter-TSS (NM_026415)","promoter-TSS (NM_026415)",-411,"NM_026415",67859,"Mm.46431","NM_026415","ENSMUSG00000036731","Cysrt1","2310002J15Rik|AV023762","cysteine rich tail 1","protein-coding"]
[18,"chr1",15805231,15806460,"+",0,"NA","exon (NM_009352, exon 1 of 10)","exon (NM_009352, exon 1 of 10)",199,"NM_001286628",21749,"Mm.4306","NM_009352","ENSMUSG00000025925","Terf1","Pin2|Trbf1|Trf1","telomeric repeat binding factor 1","protein-coding"]
[376,"chr1",161250129,161251590,"+",0,"NA","intron (NM_001303408, intron 1 of 5)","CpG",351,"NR_130150",11758,"Mm.186185","NM_007453","ENSMUSG00000026701","Prdx6","1-Cys Prx|1-cysPrx|9430088D19Rik|AA690119|Aop2|Brp-12|CP-3|GPx|Ltw-4|Ltw4|Lvtw-4|NSGPx|ORF06|Prdx5|aiPLA2","peroxiredoxin 6","protein-coding"]
[6598,"chr5",146832417,146834318,"+",0,"NA","intron (NM_019647, intron 1 of 5)","CpG",477,"NM_019647",19933,"Mm.316592","NM_019647","ENSMUSG00000041453","Rpl21","8430440E03Rik|L21","ribosomal protein L21","protein-coding"]
[5826,"chr4",130662941,130664671,"+",0,"NA","intron (NM_001159605, intron 1 of 19)","CpG",447,"NM_001159605",80912,"Mm.440206","NM_030722","ENSMUSG00000028580","Pum1","AA517475|Pumm|mKIAA0099","pumilio RNA-binding family member 1","protein-coding"]
[609,"chr10",42273713,42278614,"+",0,"NA","intron (NM_019740, intron 1 of 3)","CpG-1005",579,"NM_019740",56484,"Mm.338613","NM_019740","ENSMUSG00000048756","Foxo3","1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a","forkhead box O3","protein-coding"]
[5615,"chr4",94978556,94979655,"+",0,"NA","promoter-TSS (NM_177239)","promoter-TSS (NM_177239)",-5,"NM_177239",320713,"Mm.208868","NM_177239","ENSMUSG00000062627","Mysm1","C130067A03Rik|C530050H10Rik","myb-like, SWIRM and MPN domains 1","protein-coding"]
[7623,"chr7",127614122,127615916,"+",0,"NA","promoter-TSS (NM_177226)","promoter-TSS (NM_177226)",-586,"NM_177226",320683,"Mm.156718","NM_177226","ENSMUSG00000045639","Zfp629","9330199A09Rik|Znf629","zinc finger protein 629","protein-coding"]
[7105,"chr7",19084055,19084840,"+",0,"NA","intron (NR_126095, intron 1 of 14)","intron (NR_126095, intron 1 of 14)",598,"NM_001190491",13400,"Mm.6529","NM_032418","ENSMUSG00000030409","Dmpk","DM|DMK|Dm15|MDPK|MT-PK","dystrophia myotonica-protein kinase","protein-coding"]
[4790,"chr2",134643595,134644066,"+",0,"NA","intron (NM_029148, intron 1 of 7)","CpG",291,"NM_029148",52837,"Mm.264096","NM_029148","ENSMUSG00000034723","Tmx4","2810417D04Rik|4930500L08Rik|AI843224|AW046784|D2Bwg1356e|Txndc13|mKIAA1162","thioredoxin-related transmembrane protein 4","protein-coding"]
[6717,"chr6",43665364,43666706,"+",0,"NA","intron (NM_001311111, intron 1 of 7)","intron (NM_001311111, intron 1 of 7)",243,"NM_001311111",29807,"Mm.320979","NM_013861","ENSMUSG00000029735","Tpk1","-","thiamine pyrophosphokinase","protein-coding"]
[3652,"chr17",56762860,56765528,"+",0,"NA","promoter-TSS (NM_144858)","promoter-TSS (NM_144858)",-557,"NM_144858",224907,"Mm.293973","NM_144858","ENSMUSG00000007603","Dus3l","AI662135|AW557805","dihydrouridine synthase 3-like (S. cerevisiae)","protein-coding"]
[3373,"chr17",25013668,25017067,"+",0,"NA","promoter-TSS (NM_020608)","promoter-TSS (NM_020608)",-137,"NM_020608",57354,"Mm.328854","NM_020608","ENSMUSG00000038002","Cramp1l","5830477H08Rik|AI256853|AI790734|Tce4|mKIAA1426","Crm, cramped-like (Drosophila)","protein-coding"]
[148,"chr1",65185978,65187425,"+",0,"NA","promoter-TSS (NM_011086)","promoter-TSS (NM_011086)",16,"NM_001310624",18711,"Mm.38370","NM_011086","ENSMUSG00000025949","Pikfyve","5230400C17Rik|Pip5k|Pip5k3|Pipk5k3|PipkIII|p235","phosphoinositide kinase, FYVE finger containing","protein-coding"]
[6453,"chr5",127615933,127618044,"+",0,"NA","exon (NM_133895, exon 1 of 8)","exon (NM_133895, exon 1 of 8)",404,"NM_133895",100561,"Mm.28506","NM_133895","ENSMUSG00000029416","Slc15a4","AA987064|AW742963|C130069N12Rik|PHT1|PTR4","solute carrier family 15, member 4","protein-coding"]
[6067,"chr5",21425009,21425418,"+",0,"NA","promoter-TSS (NM_029195)","promoter-TSS (NM_029195)",310,"NM_177869",330050,"Mm.40655","NM_177869","ENSMUSG00000047221","Fam185a","4631428I10|AI847670","family with sequence similarity 185, member A","protein-coding"]
[7709,"chr7",142433819,142435539,"+",0,"NA","promoter-TSS (NM_018802)","promoter-TSS (NM_018802)",-298,"NM_001285857",55925,"Mm.213002","NM_018802","ENSMUSG00000031098","Syt8","-","synaptotagmin VIII","protein-coding"]
[1343,"chr11",80476079,80477327,"+",0,"NA","promoter-TSS (NM_009871)","promoter-TSS (NM_009871)",-343,"NM_009871",12569,"Mm.142275","NM_009871","ENSMUSG00000048895","Cdk5r1","Cdk5r|D11Bwg0379e|p25|p35","cyclin-dependent kinase 5, regulatory subunit 1 (p35)","protein-coding"]
[8383,"chr9",48480098,48481429,"+",0,"NA","promoter-TSS (NM_024233)","promoter-TSS (NM_024233)",-152,"NM_024233",104444,"Mm.21911","NM_024233","ENSMUSG00000032026","Rexo2","1810038D15Rik|AW107347|Sfn|Smfn","REX2, RNA exonuclease 2 homolog (S. cerevisiae)","protein-coding"]
[7234,"chr7",30649469,30650864,"+",0,"NA","promoter-TSS (NM_133693)","promoter-TSS (NM_133693)",62,"NM_133693",68035,"Mm.401747","NM_133693","ENSMUSG00000036733","Rbm42","1700003D06Rik|3100004P22Rik","RNA binding motif protein 42","protein-coding"]
[2655,"chr15",10981297,10982349,"+",0,"NA","promoter-TSS (NM_008537)","promoter-TSS (NM_008537)",67,"NM_008537",17117,"Mm.2787","NM_008537","ENSMUSG00000022244","Amacr","Macr1","alpha-methylacyl-CoA racemase","protein-coding"]
[726,"chr10",79531488,79533767,"+",0,"NA","intron (NM_001302389, intron 1 of 5)","intron (NM_001302389, intron 1 of 5)",1160,"NM_001302442",50784,"Mm.28873","NM_015817","ENSMUSG00000052151","Plpp2","Lpp2|PAP2-G|PAP2-gamma|PAP2c|Ppap2c","phospholipid phosphatase 2","protein-coding"]
[7722,"chr7",144552869,144554703,"+",0,"NA","promoter-TSS (NM_001195086)","promoter-TSS (NM_001195086)",-57,"NM_001195086",233977,"Mm.490347","NM_001033319","ENSMUSG00000037519","Ppfia1","C030014K08Rik|C87158|LIP.1|LIP1","protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1","protein-coding"]
[6241,"chr5",76974217,76975504,"+",0,"NA","intron (NM_025691, intron 1 of 18)","CpG",159,"NM_025691",66661,"Mm.296976","NM_025691","ENSMUSG00000036323","Srp72","5730576P14Rik|72kDa|AI132477|BC019196|C77589","signal recognition particle 72","protein-coding"]
[2703,"chr15",44426420,44428754,"+",0,"NA","promoter-TSS (NM_175009)","promoter-TSS (NM_175009)",-524,"NM_175009",223527,"Mm.291828","NM_175009","ENSMUSG00000022338","Eny2","1810057B09Rik|6720481I12|DC6|Ey2","enhancer of yellow 2 homolog (Drosophila)","protein-coding"]
[6659,"chr6",29164075,29165070,"+",0,"NA","exon (NM_133925, exon 1 of 19)","exon (NM_133925, exon 1 of 19)",152,"NM_133925",68272,"Mm.40802","NM_026650","ENSMUSG00000029701","Rbm28","2810480G15Rik|AI503051","RNA binding motif protein 28","protein-coding"]
[4110,"chr19",8929202,8930128,"+",0,"NA","promoter-TSS (NM_009073)","promoter-TSS (NM_009073)",-29,"NM_144872",225898,"Mm.31008","NM_144872","ENSMUSG00000071647","Eml3","BC022146","echinoderm microtubule associated protein like 3","protein-coding"]
[157,"chr1",72210573,72212255,"+",0,"NA","intron (NM_001005423, intron 1 of 4)","intron (NM_001005423, intron 1 of 4)",893,"NM_001005423",381269,"Mm.422636","NM_001005423","ENSMUSG00000039395","Mreg","Gm974|Wdt2|dsu","melanoregulin","protein-coding"]
[2009,"chr13",8995189,8996713,"+",0,"NA","promoter-TSS (NM_027000)","promoter-TSS (NM_027000)",61,"NM_027000",69237,"Mm.41800","NM_027000","ENSMUSG00000021149","Gtpbp4","2610028C09Rik|Crfg|Gtpbp3|NGB|Nog1","GTP binding protein 4","protein-coding"]
[1909,"chr12",86241041,86242412,"+",0,"NA","promoter-TSS (NM_027405)","promoter-TSS (NM_027405)",-152,"NM_027405",70373,"Mm.252967","NM_027405","ENSMUSG00000021254","Gpatch2l","1700020O03Rik|4732487G21Rik|A630090I05Rik|Kiaa1152","G patch domain containing 2 like","protein-coding"]
[7179,"chr7",27688704,27689094,"+",0,"NA","promoter-TSS (NM_001112731)","promoter-TSS (NM_001112731)",-441,"NM_001112731",112415,"Mm.145362","NM_198417","ENSMUSG00000057093","C030039L03Rik","-","RIKEN cDNA C030039L03 gene","protein-coding"]
[2627,"chr14",121795584,121798916,"+",0,"NA","intron (NM_134074, intron 1 of 52)","intron (NM_134074, intron 1 of 52)",484,"NM_134074",105445,"Mm.441054","NM_134074","ENSMUSG00000025558","Dock9","AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058","dedicator of cytokinesis 9","protein-coding"]
[3576,"chr17",45555087,45556096,"+",0,"NA","promoter-TSS (NM_001304956)","promoter-TSS (NM_001304956)",-109,"NM_008690",18037,"Mm.57043","NM_008690","ENSMUSG00000023947","Nfkbie","I-kappa-B-epsilon|IKBE|IkB-E|NF-kappa-BIE|ikB-epsilon","nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, epsilon","protein-coding"]
[1213,"chr11",69364649,69371404,"+",0,"NA","intron (NM_146019, intron 1 of 39)","intron (NM_146019, intron 1 of 39)",1400,"NM_146019",216848,"Mm.178246","NM_146019","ENSMUSG00000018474","Chd3","2600010P09Rik|AF020312|Chd7|Prp7|Prp9-1","chromodomain helicase DNA binding protein 3","protein-coding"]
[1093,"chr11",50915753,50916059,"+",0,"NA","intron (NM_001294323, intron 1 of 5)","CpG",270,"NM_178447",22678,"Mm.259230","NM_009550","ENSMUSG00000049321","Zfp2","9930007F06Rik|Fnp-2|Zfp-2|mKR2|mkr-2|mszf87","zinc finger protein 2","protein-coding"]
[8061,"chr8",94979993,94985097,"+",0,"NA","intron (NM_001198894, intron 1 of 13)","intron (NM_001198894, intron 1 of 13)",-1854,"NM_018882",14766,"Mm.290834","NM_018882","ENSMUSG00000031785","Adgrg1","Cyt28|Gpr56|TM7LN4|TM7XN1","adhesion G protein-coupled receptor G1","protein-coding"]
[6955,"chr6",124915325,124921492,"+",0,"NA","promoter-TSS (NM_026988)","promoter-TSS (NM_026988)",-462,"NM_026988",69202,"Mm.142187","NM_026988","ENSMUSG00000030122","Ptms","2610009E16Rik","parathymosin","protein-coding"]
[8856,"chrX",73880576,73881126,"+",0,"NA","promoter-TSS (NM_008478)","promoter-TSS (NM_008478)",-17,"NM_008478",16728,"Mm.260568","NM_008478","ENSMUSG00000031391","L1cam","CD171|L1|N-CAM-L1|NCAM-L1","L1 cell adhesion molecule","protein-coding"]
[624,"chr10",45577830,45578844,"+",0,"NA","intron (NM_172473, intron 1 of 23)","CpG",508,"NM_172473",209462,"Mm.458633","NM_172473","ENSMUSG00000038822","Hace1","1700042J16Rik|A730034A22Rik|BC025474","HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1","protein-coding"]
[6323,"chr5",110175988,110177400,"+",0,"NA","promoter-TSS (NM_008146)","promoter-TSS (NM_008146)",-7,"NM_008146",269682,"Mm.9392","NM_008146","ENSMUSG00000029502","Golga3","5330413L04|5430416E01Rik|AI449376|AW490576|G1-499-14|Mea-2|Mea2|repro27","golgi autoantigen, golgin subfamily a, 3","protein-coding"]
[371,"chr1",160792163,160793235,"+",0,"NA","intron (NM_013862, intron 1 of 20)","CpG",239,"NM_013862",29809,"Mm.25833","NM_013862","ENSMUSG00000026721","Rabgap1l","5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471","RAB GTPase activating protein 1-like","protein-coding"]
[6209,"chr5",65763134,65765670,"+",0,"NA","intron (NM_001024917, intron 1 of 19)","CpG",881,"NM_001024917",333789,"Mm.332398","NM_001024917","ENSMUSG00000037795","N4bp2","B3bp|E430014I16|Gm1791|Gm868","NEDD4 binding protein 2","protein-coding"]
[6967,"chr6",125230705,125233378,"+",0,"NA","promoter-TSS (NM_145391)","promoter-TSS (NM_145391)",-181,"NM_145391",213233,"Mm.296902","NM_145391","ENSMUSG00000038213","Tapbpl","BC017613|TAPBPL-R|Tapbplr","TAP binding protein-like","protein-coding"]
[6872,"chr6",97147312,97149308,"+",0,"NA","intron (NM_175313, intron 1 of 17)","intron (NM_175313, intron 1 of 17)",573,"NM_175313",101351,"Mm.116802","NM_175313","ENSMUSG00000035245","Eogt","A130022J15Rik|AI447490|AW214473|AW259391|Aer61","EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase","protein-coding"]
[1041,"chr11",29691612,29694945,"+",0,"NA","promoter-TSS (NM_194051)","promoter-TSS (NM_194051)",380,"NM_194052",68585,"Mm.192580","NM_024226","ENSMUSG00000020458","Rtn4","1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153","reticulon 4","protein-coding"]
[7674,"chr7",140101767,140102830,"+",0,"NA","intron (NM_001286217, intron 1 of 5)","intron (NM_001286217, intron 1 of 5)",143,"NM_001286217",69064,"Mm.41915","NM_026928",null,"Fuom","Fucu|Le51","fucose mutarotase","protein-coding"]
[8421,"chr9",55327067,55327632,"+",0,"NA","intron (NM_172923, intron 1 of 10)","intron (NM_172923, intron 1 of 10)",400,"NM_172923",244886,"Mm.24361","NM_172923","ENSMUSG00000032313","Tmem266","9630029F15|AI118078","transmembrane protein 266","protein-coding"]
[6080,"chr5",24164713,24165350,"+",0,"NA","promoter-TSS (NM_153092)","promoter-TSS (NM_153092)",68,"NM_153092",231042,"Mm.45513","NM_153092","ENSMUSG00000048439","Nupl2","AV116043|CG1|NLP-1|Nlp1","nucleoporin like 2","protein-coding"]
[1990,"chr12",112999929,113001274,"+",0,"NA","promoter-TSS (NM_028193)","promoter-TSS (NM_028193)",20,"NM_028193",72308,"Mm.196721","NM_028193","ENSMUSG00000011158","Brf1","2510002F24Rik|GTF3B|TAF3C|TAFIII90|TFIIIB90|mTFIIIB90","BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)","protein-coding"]
[3254,"chr16",92397640,92400613,"+",0,"NA","intron (NM_001081549, intron 1 of 3)","intron (NM_001081549, intron 1 of 3)",952,"NM_019466",54720,"Mm.265744","NM_019466","ENSMUSG00000022951","Rcan1","Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1","regulator of calcineurin 1","protein-coding"]
[7699,"chr7",141446923,141448947,"+",0,"NA","promoter-TSS (NR_034049)","promoter-TSS (NR_034049)",285,"NM_026020",67186,"Mm.380435","NM_026020","ENSMUSG00000025508","Rplp2","2700049I22Rik","ribosomal protein, large P2","protein-coding"]
[5235,"chr3",95588448,95589669,"+",0,"NA","exon (NM_001177670, exon 1 of 6)","exon (NM_001177670, exon 1 of 6)",124,"NM_001177670",229593,"Mm.245830","NM_146133","ENSMUSG00000046519","Golph3l","2010204I15Rik|AU015439|AW549227|C77637|Gpp34r","golgi phosphoprotein 3-like","protein-coding"]
[2109,"chr13",43558578,43560844,"+",0,"NA","intron (NM_001081059, intron 1 of 8)","CpG",480,"NM_001081059",76137,"Mm.426290","NM_001081059","ENSMUSG00000021371","Mcur1","6230416A05Rik|AU015498|AV136929|AW554392|C88263|Ccdc90a","mitochondrial calcium uniporter regulator 1","protein-coding"]
[6544,"chr5",139250659,139254510,"+",0,"NA","promoter-TSS (NM_001163316)","promoter-TSS (NM_001163316)",260,"NM_026269",67604,"Mm.270137","NM_026269","ENSMUSG00000025858","Get4","1110007L15Rik|AW412535|Cee","golgi to ER traffic protein 4 homolog (S. cerevisiae)","protein-coding"]
[5133,"chr3",86140818,86142541,"+",0,"NA","promoter-TSS (NR_004418)","promoter-TSS (NR_004418)",989,"NM_016959",20091,"Mm.391785","NM_016959","ENSMUSG00000028081","Rps3a1","Rps3a","ribosomal protein S3A1","protein-coding"]
[3539,"chr17",35836740,35838758,"+",0,"NA","intron (NM_011655, intron 1 of 3)","intron (NM_011655, intron 1 of 3)",552,"NM_011655",22154,"Mm.273538","NM_011655","ENSMUSG00000001525","Tubb5","AA408537|AI596182|B130022C14Rik|M(beta)5","tubulin, beta 5 class I","protein-coding"]
[6311,"chr5",108131557,108133750,"+",0,"NA","promoter-TSS (NM_028876)","promoter-TSS (NM_028876)",-62,"NM_028876",73130,"Mm.363960","NM_028876","ENSMUSG00000063406","Tmed5","3110020O18Rik|4432412D15Rik","transmembrane emp24 protein transport domain containing 5","protein-coding"]
[6205,"chr5",65435152,65436462,"+",0,"NA","promoter-TSS (NM_009466)","promoter-TSS (NM_009466)",35,"NM_009466",22235,"Mm.344831","NM_009466","ENSMUSG00000029201","Ugdh","Udpgdh","UDP-glucose dehydrogenase","protein-coding"]
[345,"chr1",153184794,153187322,"+",0,"NA","5' UTR (NM_008485, exon 2 of 24)","5' UTR (NM_008485, exon 2 of 24)",389,"NM_008485",16782,"Mm.329272","NM_008485","ENSMUSG00000026479","Lamc2","AA589349","laminin, gamma 2","protein-coding"]
[3323,"chr17",21650065,21650813,"+",0,"NA","promoter-TSS (NM_001166497)","promoter-TSS (NM_001166497)",-172,"NM_001166497",73229,"Mm.296733","NM_001166497",null,"3110052M02Rik","mszf57|mszf71","RIKEN cDNA 3110052M02 gene","protein-coding"]
[613,"chr10",42761184,42762642,"+",0,"NA","intron (NM_153055, intron 1 of 20)","CpG",417,"NM_153055",140740,"Mm.214344","NM_153055","ENSMUSG00000019802","Sec63","5730478J10Rik|AI649014|AW319215","SEC63-like (S. cerevisiae)","protein-coding"]
[5141,"chr3",88042648,88043689,"+",0,"NA","promoter-TSS (NM_025663)","promoter-TSS (NM_025663)",62,"NM_025663",66614,"Mm.46029","NM_025663","ENSMUSG00000028069","Gpatch4","2610029K21Rik|Gpatc4","G patch domain containing 4","protein-coding"]
[7970,"chr8",79711240,79712381,"+",0,"NA","promoter-TSS (NM_015751)","promoter-TSS (NM_015751)",-10,"NM_026904",68999,"Mm.257445","NM_026904","ENSMUSG00000036977","Anapc10","1500026N15Rik|A830003M23Rik|APC10","anaphase promoting complex subunit 10","protein-coding"]
[5181,"chr3",89910246,89914002,"+",0,"NA","intron (NM_001310676, intron 1 of 9)","intron (NM_001310676, intron 1 of 9)",1072,"NM_001310676",16194,"Mm.2856","NM_010559","ENSMUSG00000027947","Il6ra","CD126|IL-6R|IL-6R-alpha|IL-6RA|Il6r","interleukin 6 receptor, alpha","protein-coding"]
[6841,"chr6",86848498,86850452,"+",0,"NA","promoter-TSS (NR_028298)","promoter-TSS (NR_028298)",-35,"NR_028298",67170,"Mm.119489","NR_028298","ENSMUSG00000100164","2610306M01Rik","-","RIKEN cDNA 2610306M01 gene","ncRNA"]
[952,"chr11",3912794,3914932,"+",0,"NA","5' UTR (NM_153142, exon 1 of 2)","5' UTR (NM_153142, exon 1 of 2)",801,"NM_153142",103710,"Mm.171514","NM_153142","ENSMUSG00000048807","Slc35e4","A330108F03Rik|AI414849|AI536442","solute carrier family 35, member E4","protein-coding"]
[2691,"chr15",37005565,37008219,"+",0,"NA","intron (NM_026521, intron 1 of 3)","intron (NM_026521, intron 1 of 3)",510,"NM_026521",68036,"Mm.371631","NM_026521","ENSMUSG00000062397","Zfp706","3110006P09Rik|AA793007|AW536850|C77232|Znf706","zinc finger protein 706","protein-coding"]
[6758,"chr6",56796807,56798605,"+",0,"NA","5' UTR (NM_145958, exon 1 of 4)","5' UTR (NM_145958, exon 1 of 4)",107,"NM_145958",210973,"Mm.57295","NM_145958","ENSMUSG00000059486","Kbtbd2","BC022962|Bklhd1|mKIAA1489","kelch repeat and BTB (POZ) domain containing 2","protein-coding"]
[4804,"chr2",144368519,144369336,"+",0,"NA","promoter-TSS (NM_001164813)","promoter-TSS (NM_001164813)",-56,"NM_001164813",100048644,"Mm.227925","NM_001164813",null,"Pet117","Gm20571","PET117 homolog (S. cerevisiae)","protein-coding"]
[4498,"chr2",37422167,37423520,"+",0,"NA","promoter-TSS (NM_001100591)","promoter-TSS (NM_001100591)",60,"NM_001100591",319817,"Mm.288785","NM_001100591","ENSMUSG00000075376","Rc3h2","2900024N03Rik|9430019J22Rik|D930043C02Rik|Mnab|Rnf164","ring finger and CCCH-type zinc finger domains 2","protein-coding"]
[1071,"chr11",45943775,45944884,"+",0,"NA","TTS (NM_001290737)","TTS (NM_001290737)",606,"NM_028185",72290,"Mm.249827","NM_028185","ENSMUSG00000044847","Lsm11","2210404M20Rik|AV079530","U7 snRNP-specific Sm-like protein LSM11","protein-coding"]
[3058,"chr16",17722439,17722965,"+",0,"NA","intron (NM_001285886, intron 1 of 16)","CpG",198,"NM_001285886",94112,"Mm.208970","NM_033609","ENSMUSG00000012114","Med15","A230074L19Rik|AW536074|Pcqap|mPcqap","mediator complex subunit 15","protein-coding"]
[4331,"chr2",11602289,11603212,"+",0,"NA","intron (NM_152824, intron 1 of 11)","intron (NM_152824, intron 1 of 11)",449,"NM_152824",76938,"Mm.182769","NM_152824","ENSMUSG00000037197","Rbm17","2700027J02Rik","RNA binding motif protein 17","protein-coding"]
[4158,"chr19",25236337,25238237,"+",0,"NA","promoter-TSS (NM_181404)","promoter-TSS (NM_181404)",85,"NM_181404",107351,"Mm.260722","NM_181404","ENSMUSG00000032702","Kank1","A930031B09Rik|AU015049|AW121052|Ankrd15|D330024H06Rik|mKIAA0172","KN motif and ankyrin repeat domains 1","protein-coding"]
[5388,"chr3",142620669,142621005,"+",0,"NA","intron (NM_010260, intron 1 of 10)","intron (NM_010260, intron 1 of 10)",174,"NM_010260",14469,"Mm.24038","NM_010260","ENSMUSG00000028270","Gbp2","-","guanylate binding protein 2","protein-coding"]
[6602,"chr5",147075917,147078240,"+",0,"NA","promoter-TSS (NM_181730)","promoter-TSS (NM_181730)",-268,"NM_181730",20018,"Mm.317557","NM_009087","ENSMUSG00000029642","Polr1d","1110003G10Rik|AC19|RPA16|Rpo1-3","polymerase (RNA) I polypeptide D","protein-coding"]
[5817,"chr4",129671749,129673483,"+",0,"NA","intron (NM_008468, intron 1 of 13)","CpG",151,"NM_008468",16650,"Mm.202358","NM_008468","ENSMUSG00000003731","Kpna6","IPOA7|Kpna5|NPI-2","karyopherin (importin) alpha 6","protein-coding"]
[6393,"chr5",121190474,121191976,"+",0,"NA","5' UTR (NM_001109992, exon 1 of 16)","5' UTR (NM_001109992, exon 1 of 16)",172,"NM_001109992",19247,"Mm.8681","NM_011202","ENSMUSG00000043733","Ptpn11","2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp","protein tyrosine phosphatase, non-receptor type 11","protein-coding"]
[5949,"chr4",141981838,141982246,"+",0,"NA","promoter-TSS (NR_040672)","promoter-TSS (NR_040672)",-950,"NR_040672",545691,"Mm.332015","NR_040672","ENSMUSG00000085424","Fhad1os1","Gm13037|OTTMUSG00000010113","forkhead-associated (FHA) phosphopeptide binding domain 1, opposite strand 1","ncRNA"]
[179,"chr1",75210427,75211470,"+",0,"NA","promoter-TSS (NM_029010)","promoter-TSS (NM_029010)",119,"NM_011494",20872,"Mm.1155","NM_011494","ENSMUSG00000026201","Stk16","EDPK|Krct|MPSK|PKL12|TSF-1","serine/threonine kinase 16","protein-coding"]
[8226,"chr8",124947236,124949731,"+",0,"NA","exon (NM_053207, exon 1 of 5)","exon (NM_053207, exon 1 of 5)",771,"NM_053207",112405,"Mm.140619","NM_053207","ENSMUSG00000031987","Egln1","AI503754|C1orf12|HIF-PH2|HPH-2|Hif-p4h-2|ORF13|Phd2|SM-20","egl-9 family hypoxia-inducible factor 1","protein-coding"]
[8729,"chr9",121642839,121643031,"+",0,"NA","intron (NM_011703, intron 1 of 12)","CpG",219,"NM_011703",22354,"Mm.282007","NM_011703","ENSMUSG00000032528","Vipr1","AV071699|VIP-R1|VPAC1","vasoactive intestinal peptide receptor 1","protein-coding"]
[6760,"chr6",56901246,56902474,"+",0,"NA","promoter-TSS (NM_001252374)","promoter-TSS (NM_001252374)",26,"NM_001252374",107569,"Mm.158936","NM_026004","ENSMUSG00000029780","Nt5c3","1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5c3a|Nt5y|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36","5'-nucleotidase, cytosolic III","protein-coding"]
[3705,"chr17",78734972,78737275,"+",0,"NA","intron (NM_011500, intron 1 of 17)","intron (NM_011500, intron 1 of 17)",437,"NM_011500",268980,"Mm.311915","NM_011500","ENSMUSG00000024077","Strn","AU022939|D130055P19","striatin, calmodulin binding protein","protein-coding"]
[3948,"chr18",75004158,75006360,"+",0,"NA","promoter-TSS (NM_001001181)","promoter-TSS (NM_001001181)",-641,"NM_001001181",407819,"Mm.29866","NM_001001181","ENSMUSG00000036299","BC031181","-","cDNA sequence BC031181","protein-coding"]
[2499,"chr14",55764251,55765645,"+",0,"NA","Intergenic","Intergenic",-1014,"NM_008519",16995,"Mm.20853","NM_008519","ENSMUSG00000046908","Ltb4r1","BLT1|BLTR|Ltb4r|mBLTR","leukotriene B4 receptor 1","protein-coding"]
[7701,"chr7",141466778,141470080,"+",0,"NA","promoter-TSS (NM_001111050)","promoter-TSS (NM_001111050)",-360,"NM_001111050",12476,"Mm.30246","NM_009842","ENSMUSG00000025510","Cd151","PETA-3|SFA-1|Tspan24","CD151 antigen","protein-coding"]
[4016,"chr19",4926825,4928632,"+",0,"NA","intron (NM_133803, intron 1 of 17)","intron (NM_133803, intron 1 of 17)",559,"NM_133803",75221,"Mm.234769","NM_133803","ENSMUSG00000063904","Dpp3","4930533O14Rik|C86324","dipeptidylpeptidase 3","protein-coding"]
[3882,"chr18",50051158,50056626,"+",0,"NA","intron (NM_134131, intron 1 of 1)","intron (NM_134131, intron 1 of 1)",610,"NM_134131",106869,"Mm.27740","NM_134131","ENSMUSG00000062210","Tnfaip8","AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2","tumor necrosis factor, alpha-induced protein 8","protein-coding"]
[1830,"chr12",71014737,71017421,"+",0,"NA","promoter-TSS (NR_045056)","promoter-TSS (NR_045056)",112,"NM_001081195",238247,"Mm.241601","NM_001081195","ENSMUSG00000048118","Arid4a","A630009N03|A630067N03Rik|MmRBBP1|Rbbp1","AT rich interactive domain 4A (RBP1-like)","protein-coding"]
[3917,"chr18",64887330,64888538,"+",0,"NA","5' UTR (NM_001114386, exon 1 of 31)","5' UTR (NM_001114386, exon 1 of 31)",178,"NM_001114386",83814,"Mm.98668","NM_031881","ENSMUSG00000024589","Nedd4l","1300012C07Rik|Nedd4-2|Nedd4b","neural precursor cell expressed, developmentally down-regulated gene 4-like","protein-coding"]
[3060,"chr16",17910577,17911297,"+",0,"NA","intron (NM_022408, intron 1 of 9)","intron (NM_022408, intron 1 of 9)",411,"NM_022408",27886,"Mm.256480","NM_022408","ENSMUSG00000003527","Dgcr14","AI462402|D16H22S1269E|Dgcr1|Dgsi|ES2|Es2el","DiGeorge syndrome critical region gene 14","protein-coding"]
[3167,"chr16",43889111,43890455,"+",0,"NA","promoter-TSS (NM_027801)","promoter-TSS (NM_027801)",-107,"NM_029128",106248,"Mm.275354","NM_029128","ENSMUSG00000022704","Qtrtd1","3110012M05Rik|4930470H18Rik|AI648807","queuine tRNA-ribosyltransferase domain containing 1","protein-coding"]
[7411,"chr7",81762280,81763646,"+",0,"NA","promoter-TSS (NM_025997)","promoter-TSS (NM_025997)",10,"NM_025997",67148,"Mm.241472","NM_025997","ENSMUSG00000038646","Fam103a1","2410047I02Rik|2610204K14Rik|RAM","family with sequence similarity 103, member A1","protein-coding"]
[6433,"chr5",123930334,123931098,"+",0,"NA","promoter-TSS (NM_001134767)","promoter-TSS (NM_001134767)",27,"NM_001134767",208908,"Mm.243679","NM_001134767","ENSMUSG00000061882","Ccdc62","AI661708|Gm150","coiled-coil domain containing 62","protein-coding"]
[5695,"chr4",116074602,116077347,"+",0,"NA","promoter-TSS (NM_025641)","promoter-TSS (NM_025641)",705,"NM_153521",230654,"Mm.3655","NM_153521","ENSMUSG00000028703","Lrrc41","AA409966|AW555107|D630045E04Rik|D730026A16Rik|MUF1","leucine rich repeat containing 41","protein-coding"]
[4203,"chr19",38836185,38837382,"+",0,"NA","exon (NM_145952, exon 1 of 13)","exon (NM_145952, exon 1 of 13)",204,"NM_145952",209478,"Mm.391153","NM_145952","ENSMUSG00000048720","Tbc1d12","BC033574","TBC1D12: TBC1 domain family, member 12","protein-coding"]
[7163,"chr7",25897011,25899317,"+",0,"NA","intron (NM_009999, intron 1 of 8)","intron (NM_009999, intron 1 of 8)",506,"NM_009999",13088,"Mm.218749","NM_009999","ENSMUSG00000030483","Cyp2b10","Cyp2b|Cyp2b20|p16","cytochrome P450, family 2, subfamily b, polypeptide 10","protein-coding"]
[7453,"chr7",98308052,98309880,"+",0,"NA","intron (NM_025408, intron 1 of 10)","CpG",561,"NM_025408",66190,"Mm.334041","NM_025408","ENSMUSG00000030760","Acer3","1110057L18Rik|5430429L08Rik|AV015045|Phca","alkaline ceramidase 3","protein-coding"]
[8937,"chrX",140598972,140599487,"+",0,"NA","intron (NM_001077364, intron 1 of 3)","CpG",1293,"NM_001077364",14605,"Mm.22216","NM_010286","ENSMUSG00000031431","Tsc22d3","DIP|Dsip1|Gilz|TSC-22R|Tilz3","TSC22 domain family, member 3","protein-coding"]
[258,"chr1",106758626,106760254,"+",0,"NA","intron (NM_027534, intron 1 of 9)","CpG",302,"NM_027534",70750,"Mm.458911","NM_027534","ENSMUSG00000009905","Kdsr","6330410P18Rik|9430079B08Rik|Fvt1","3-ketodihydrosphingosine reductase","protein-coding"]
[2620,"chr14",118705653,118706759,"+",0,"NA","promoter-TSS (NM_001033336)","promoter-TSS (NM_001033336)",13,"NM_001163676",239273,"Mm.40537","NM_001033336","ENSMUSG00000032849","Abcc4","D630049P08Rik|MOATB|MRP4","ATP-binding cassette, sub-family C (CFTR/MRP), member 4","protein-coding"]
[8137,"chr8",110805053,110805871,"+",0,"NA","intron (NM_029646, intron 1 of 7)","intron (NM_029646, intron 1 of 7)",462,"NM_029646",76527,"Mm.77697","NM_029646","ENSMUSG00000031750","Il34","2010004A03Rik|AI593503","interleukin 34","protein-coding"]
[4022,"chr19",5106081,5107002,"+",0,"NA","intron (NM_029576, intron 1 of 5)","intron (NM_029576, intron 1 of 5)",455,"NM_029576",76308,"Mm.182563","NM_029576","ENSMUSG00000024870","Rab1b","1110011F09Rik","RAB1B, member RAS oncogene family","protein-coding"]
[2138,"chr13",51846822,51847347,"+",0,"NA","intron (NM_011817, intron 1 of 3)","CpG-3857",409,"NM_011817",23882,"Mm.281298","NM_011817","ENSMUSG00000021453","Gadd45g","AI327420|C86281|CR6|DDIT2|OIG37","growth arrest and DNA-damage-inducible 45 gamma","protein-coding"]
[6479,"chr5",134580949,134582147,"+",0,"NA","Intergenic","Intergenic",-1142,"NM_020022",19718,"Mm.332739","NM_020022",null,"Rfc2","2610008M13Rik|40kDa|AI326953|Recc2","replication factor C (activator 1) 2","protein-coding"]
[7376,"chr7",78895536,78897069,"+",0,"NA","intron (NM_001162939, intron 1 of 3)","intron (NM_001162939, intron 1 of 3)",375,"NM_001162939",68048,"Mm.34109","NM_026531","ENSMUSG00000030609","Aen","2700083B06Rik|Isg20l1","apoptosis enhancing nuclease","protein-coding"]
[141,"chr1",64119175,64123208,"+",0,"NA","5' UTR (NM_033563, exon 1 of 4)","5' UTR (NM_033563, exon 1 of 4)",198,"NM_033563",93691,"Mm.29466","NM_033563",null,"Klf7","9830124P08Rik","Kruppel-like factor 7 (ubiquitous)","protein-coding"]
[3043,"chr16",16358272,16359274,"+",0,"NA","promoter-TSS (NR_075074)","promoter-TSS (NR_075074)",-198,"NR_075074",74006,"Mm.218820","NM_152816","ENSMUSG00000022789","Dnm1l","6330417M19Rik|AI450666|Dlp1|Dnmlp1|Drp1|python","dynamin 1-like","protein-coding"]
[4228,"chr19",43523709,43526885,"+",0,"NA","promoter-TSS (NM_010324)","promoter-TSS (NM_010324)",-692,"NM_010324",14718,"Mm.19039","NM_010324","ENSMUSG00000025190","Got1","AI789014|Got-1|cAspAT|cCAT","glutamic-oxaloacetic transaminase 1, soluble","protein-coding"]
[1230,"chr11",69876742,69884724,"+",0,"NA","TTS (NM_153788)","TTS (NM_153788)",252,"NM_153143",216858,"Mm.239498","NM_153143","ENSMUSG00000046731","Kctd11","AF465352|Ren","potassium channel tetramerisation domain containing 11","protein-coding"]
[2793,"chr15",76722862,76725304,"+",0,"NA","promoter-TSS (NM_145472)","promoter-TSS (NM_145472)",-238,"NM_176828",223665,"Mm.291713","NM_145472","ENSMUSG00000033707","C030006K11Rik","1110033I13Rik","RIKEN cDNA C030006K11 gene","protein-coding"]
[6155,"chr5",35756529,35758248,"+",0,"NA","promoter-TSS (NM_001177700)","promoter-TSS (NM_001177700)",-492,"NM_001177697",231148,"Mm.254446","NM_177678","ENSMUSG00000029095","Ablim2","AI606905|C230091L11","actin-binding LIM protein 2","protein-coding"]
[6387,"chr5",120503078,120503581,"+",0,"NA","exon (NM_023625, exon 1 of 12)","exon (NM_023625, exon 1 of 12)",294,"NM_023625",71772,"Mm.100065","NM_023625","ENSMUSG00000029598","Plbd2","1300012G16Rik|AU019810|P76","phospholipase B domain containing 2","protein-coding"]
[5865,"chr4",133750597,133757593,"+",0,"NA","promoter-TSS (NM_001080819)","promoter-TSS (NM_001080819)",-484,"NM_001080819",93760,"Mm.22478","NM_001080819","ENSMUSG00000007880","Arid1a","1110030E03Rik|BAF250a|Osa1|Smarcf1","AT rich interactive domain 1A (SWI-like)","protein-coding"]
[7446,"chr7",97371693,97372216,"+",0,"NA","intron (NM_199035, intron 1 of 12)","MIRb|SINE|MIR",337,"NM_199035",381903,"Mm.279683","NM_199035","ENSMUSG00000035704","Alg8","AI447372|Gm1089","asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase)","protein-coding"]
[3590,"chr17",46383222,46384425,"+",0,"NA","promoter-TSS (NM_021346)","promoter-TSS (NM_021346)",57,"NM_021346",57908,"Mm.439916","NM_021346","ENSMUSG00000015597","Zfp318","2610034E08Rik|D530032D06Rik|TZF|Znf318","zinc finger protein 318","protein-coding"]
[1060,"chr11",35979189,35981058,"+",0,"NA","promoter-TSS (NM_170779)","promoter-TSS (NM_170779)",-34,"NM_170779",211652,"Mm.31267","NM_170779",null,"Wwc1","AA408228|AU017197|BC037006|Kibra|mKIAA0869","WW, C2 and coiled-coil domain containing 1","protein-coding"]
[3759,"chr18",9449337,9450782,"+",0,"NA","promoter-TSS (NM_026484)","promoter-TSS (NM_026484)",91,"NM_026484",67974,"Mm.86523","NM_026484","ENSMUSG00000024286","Ccny","1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik","cyclin Y","protein-coding"]
[2104,"chr13",42299420,42302960,"+",0,"NA","promoter-TSS (NM_010104)","promoter-TSS (NM_010104)",-80,"NM_010104",13614,"Mm.14543","NM_010104","ENSMUSG00000021367","Edn1","ET-1|preproET","endothelin 1","protein-coding"]
[6171,"chr5",38560459,38562604,"+",0,"NA","promoter-TSS (NM_011715)","promoter-TSS (NM_011715)",64,"NM_011715",22388,"Mm.2654","NM_011715","ENSMUSG00000005103","Wdr1","Aip1|D5Wsu185e|rede","WD repeat domain 1","protein-coding"]
[2894,"chr15",89210016,89212026,"+",0,"NA","promoter-TSS (NM_027805)","promoter-TSS (NM_027805)",-538,"NM_026813",71474,"Mm.184055","NM_026813","ENSMUSG00000036561","Ppp6r2","1110033O10Rik|8430411H09Rik|B230107H12Rik|Pp6r2|Saps2","protein phosphatase 6, regulatory subunit 2","protein-coding"]
[2126,"chr13",49146683,49147922,"+",0,"NA","intron (NM_001290311, intron 1 of 28)","CpG-3837",1026,"NM_029361",75607,"Mm.342723","NM_029361","ENSMUSG00000037989","Wnk2","1810073P09Rik|AW122246|ESTM15|X83337|mKIAA1760","WNK lysine deficient protein kinase 2","protein-coding"]
[2858,"chr15",82899071,82900226,"+",0,"NA","intron (NR_045068, intron 1 of 3)","CpG",568,"NR_045068",100504637,"Mm.440928","NR_045068","ENSMUSG00000100199","Gm20324","-","predicted gene, 20324","ncRNA"]
[4221,"chr19",42045731,42046040,"+",0,"NA","promoter-TSS (NM_026152)","promoter-TSS (NM_026152)",34,"NM_026152",67432,"Mm.24196","NM_026152","ENSMUSG00000025176","Hoga1","0610010D20Rik|Dhdpsl|Npl2","4-hydroxy-2-oxoglutarate aldolase 1","protein-coding"]
[8644,"chr9",107706717,107710593,"+",0,"NA","intron (NM_011349, intron 1 of 17)","intron (NM_011349, intron 1 of 17)",1820,"NM_011349",20350,"Mm.12903","NM_011349","ENSMUSG00000034684","Sema3f","Sema4|Semak","sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F","protein-coding"]
[2526,"chr14",61556084,61557665,"+",0,"NA","promoter-TSS (NM_025697)","promoter-TSS (NM_025697)",12,"NM_025697",66674,"Mm.282706","NM_025697","ENSMUSG00000021930","Spryd7","6330409N04Rik|Clld6","SPRY domain containing 7","protein-coding"]
[972,"chr11",5443613,5445489,"+",0,"NA","exon (NM_001080924, exon 1 of 9)","exon (NM_001080924, exon 1 of 9)",296,"NM_001080924",407821,"Mm.216313","NM_001080924","ENSMUSG00000041961","Znrf3","Gm1167","zinc and ring finger 3","protein-coding"]
[7787,"chr8",22705863,22706919,"+",0,"NA","intron (NM_001159774, intron 1 of 21)","CpG",192,"NM_010546",16150,"Mm.277886","NM_010546","ENSMUSG00000031537","Ikbkb","AI132552|IKK-2|IKK-beta|IKK2|IKK[b]|IKKbeta","inhibitor of kappaB kinase beta","protein-coding"]
[8397,"chr9",51008170,51009736,"+",0,"NA","5' UTR (NM_178710, exon 1 of 16)","5' UTR (NM_178710, exon 1 of 16)",120,"NM_178710",235344,"Mm.104932","NM_178710","ENSMUSG00000037112","Sik2","G630080D20Rik|Snf1lk2","salt inducible kinase 2","protein-coding"]
[3,"chr1",5018534,5020186,"+",0,"NA","promoter-TSS (NM_001290372)","promoter-TSS (NM_001290372)",179,"NM_021374",58175,"Mm.103771","NM_021374","ENSMUSG00000002459","Rgs20","2900073E09Rik|Rgsz1","regulator of G-protein signaling 20","protein-coding"]
[7802,"chr8",25976371,25976879,"+",0,"NA","exon (NM_029884, exon 1 of 18)","exon (NM_029884, exon 1 of 18)",119,"NM_029884",52120,"Mm.28326","NM_029884","ENSMUSG00000037260","Hgsnat","9430010M12Rik|AW208455|D8Ertd354e|Tmem76","heparan-alpha-glucosaminide N-acetyltransferase","protein-coding"]
[5643,"chr4",106315253,106319305,"+",0,"NA","intron (NM_183225, intron 1 of 67)","intron (NM_183225, intron 1 of 67)",1066,"NM_183225",329908,"Mm.234544","NM_183225","ENSMUSG00000028514","Usp24","2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851","ubiquitin specific peptidase 24","protein-coding"]
[248,"chr1",95312971,95314542,"+",0,"NA","5' UTR (NM_026321, exon 1 of 3)","5' UTR (NM_026321, exon 1 of 3)",128,"NM_026321",67698,"Mm.272705","NM_026321","ENSMUSG00000051185","Fam174a","2310044D20Rik|Fam174|Naa6|Tmem157","family with sequence similarity 174, member A","protein-coding"]
[5608,"chr4",88094079,88095168,"+",0,"NA","promoter-TSS (NM_001081184)","promoter-TSS (NM_001081184)",-7,"NM_001081184",230393,"Mm.287210","NM_001081184","ENSMUSG00000038368","Focad","Kiaa1797|mKIAA1797","focadhesin","protein-coding"]
[802,"chr10",84621942,84624024,"+",0,"NA","intron (NM_027423, intron 1 of 27)","intron (NM_027423, intron 1 of 27)",546,"NM_027423",70428,"Mm.335007","NM_027423","ENSMUSG00000034453","Polr3b","2700078H01Rik|A330032P03Rik|C85372|RPC2","polymerase (RNA) III (DNA directed) polypeptide B","protein-coding"]
[3924,"chr18",66457744,66459260,"+",0,"NA","promoter-TSS (NM_021451)","promoter-TSS (NM_021451)",-102,"NM_021451",58801,"Mm.271878","NM_021451","ENSMUSG00000024521","Pmaip1","Noxa","phorbol-12-myristate-13-acetate-induced protein 1","protein-coding"]
[3420,"chr17",27907150,27910256,"+",0,"NA","promoter-TSS (NM_026836)","promoter-TSS (NM_026836)",-603,"NM_001286040",224650,"Mm.32556","NM_181413","ENSMUSG00000024219","Anks1","Anks1a|mKIAA0229","ankyrin repeat and SAM domain containing 1","protein-coding"]
[8097,"chr8",105825039,105828219,"+",0,"NA","intron (NM_145824, intron 1 of 13)","intron (NM_145824, intron 1 of 13)",721,"NM_145824",74334,"Mm.4206","NM_145824","ENSMUSG00000037415","Ranbp10","4432417N03Rik","RAN binding protein 10","protein-coding"]
[5130,"chr3",85573775,85574464,"+",0,"NA","promoter-TSS (NM_144896)","promoter-TSS (NM_144896)",-10,"NM_144896",229487,"Mm.52275","NM_144896","ENSMUSG00000028085","Gatb","9430026F02Rik|Pet112|Pet112l","glutamyl-tRNA(Gln) amidotransferase, subunit B","protein-coding"]
[3269,"chr16",96081370,96083579,"+",0,"NA","promoter-TSS (NM_001103179)","promoter-TSS (NM_001103179)",-46,"NM_145125",93871,"Mm.240871","NM_145125","ENSMUSG00000022914","Brwd1","5330419I02Rik|D530019K20Rik|G1-403-16|Wdr9|repro5","bromodomain and WD repeat domain containing 1","protein-coding"]
[2632,"chr15",3270666,3271057,"+",0,"NA","promoter-TSS (NM_001042614)","promoter-TSS (NM_001042614)",50,"NM_001042614",20363,"Mm.392203","NM_009155","ENSMUSG00000064373","Sepp1","AU018766|D15Ucla1|Se-P|selp","selenoprotein P, plasma, 1","protein-coding"]
[5684,"chr4",113999011,114000654,"+",0,"NA","promoter-TSS (NM_001167876)","promoter-TSS (NM_001167876)",-329,"NM_001167876",242627,"Mm.484115","NM_001167876","ENSMUSG00000078598","Skint5","OTTMUSG00000008560|Skint-5","selection and upkeep of intraepithelial T cells 5","protein-coding"]
[6261,"chr5",92042084,92043588,"+",0,"NA","promoter-TSS (NM_001276315)","promoter-TSS (NM_001276315)",-140,"NM_001276315",53886,"Mm.44963","NM_016912","ENSMUSG00000029403","Cdkl2","5330436L21Rik|AI505225|KKIAMRE|Kkm","cyclin-dependent kinase-like 2 (CDC2-related kinase)","protein-coding"]
[6243,"chr5",77113669,77116543,"+",0,"NA","promoter-TSS (NM_175606)","promoter-TSS (NM_175606)",17,"NM_175606",74318,"Mm.181852","NM_175606","ENSMUSG00000059325","Hopx","1110018K11Rik|1200015P04Rik|2300002F06Rik|AI848177|AW490897|Cameo|Hdop|Hod|Hop|Ob1|Obl|Toto","HOP homeobox","protein-coding"]
[8349,"chr9",43743278,43747932,"+",0,"NA","intron (NM_021424, intron 1 of 5)","CpG",1029,"NM_021424",58235,"Mm.335096","NM_021424","ENSMUSG00000032012","Pvrl1","AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|nectin-1","poliovirus receptor-related 1","protein-coding"]
[4869,"chr2",155591885,155593145,"+",0,"NA","intron (NM_008180, intron 1 of 12)","CpG",295,"NM_001291111",14854,"Mm.252316","NM_008180","ENSMUSG00000027610","Gss","AI314904|GS-A/GS-B|GSH-S","glutathione synthetase","protein-coding"]
[2812,"chr15",78934741,78936050,"+",0,"NA","intron (NM_133800, intron 1 of 5)","intron (NM_133800, intron 1 of 5)",462,"NM_133800",97961,"Mm.157216","NM_133800",null,"Nol12","C78541|Nop25","nucleolar protein 12","protein-coding"]
[6361,"chr5",115299672,115301653,"+",0,"NA","promoter-TSS (NR_131932)","promoter-TSS (NR_131932)",328,"NM_019682",56455,"Mm.256858","NM_019682","ENSMUSG00000009013","Dynll1","Dlc8|Dnclc1|Pin","dynein light chain LC8-type 1","protein-coding"]
[560,"chr10",19932967,19935103,"+",0,"NA","promoter-TSS (NM_008580)","promoter-TSS (NM_008580)",-491,"NM_008580",26408,"Mm.6595","NM_008580","ENSMUSG00000071369","Map3k5","7420452D20Rik|ASK|ASK1|MAPKKK5|Mekk5","mitogen-activated protein kinase kinase kinase 5","protein-coding"]
[2830,"chr15",80089050,80090261,"+",0,"NA","Intergenic","Intergenic",-1679,"NM_009303",20972,"Mm.230301","NM_009303","ENSMUSG00000022415","Syngr1","R75468|Syngr1b|p29","synaptogyrin 1","protein-coding"]
[798,"chr10",83648262,83648823,"+",0,"NA","exon (NM_145220, exon 1 of 21)","exon (NM_145220, exon 1 of 21)",122,"NM_145220",216190,"Mm.282985","NM_145220","ENSMUSG00000020263","Appl2","Dip3b","adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2","protein-coding"]
[898,"chr10",127058971,127060809,"+",0,"NA","5' UTR (NM_001033262, exon 1 of 4)","5' UTR (NM_001033262, exon 1 of 4)",294,"NM_001033262",216438,"Mm.37892","NM_001033262",null,"2009-03-01","AI608492|BC019560","membrane-associated ring finger (C3HC4) 9","protein-coding"]
[3670,"chr17",65612363,65614774,"+",0,"NA","promoter-TSS (NM_013933)","promoter-TSS (NM_013933)",-13,"NM_013933",30960,"Mm.266767","NM_013933","ENSMUSG00000024091","Vapa","33kDa|VAP33","vesicle-associated membrane protein, associated protein A","protein-coding"]
[7391,"chr7",80268181,80270355,"+",0,"NA","promoter-TSS (NM_178070)","promoter-TSS (NM_178070)",-387,"NM_178070",233405,"Mm.322870","NM_178070","ENSMUSG00000030534","Vps33b","-","vacuolar protein sorting 33B (yeast)","protein-coding"]
[7239,"chr7",30779683,30792151,"+",0,"NA","Intergenic","Intergenic",-1988,"NM_001033131",64661,"Mm.268157","NM_001033131","ENSMUSG00000074199","Krtdap","Kdap|sk221","keratinocyte differentiation associated protein","protein-coding"]
[1273,"chr11",74770325,74771715,"+",0,"NA","intron (NM_026197, intron 1 of 9)","CpG",157,"NM_026197",67493,"Mm.45748","NM_026197",null,"Mettl16","2610100D03Rik|2810013M15Rik|A830095F14Rik|AI846133|Mett10d","methyltransferase like 16","protein-coding"]
[451,"chr1",179959493,179960700,"+",0,"NA","promoter-TSS (NM_001033285)","promoter-TSS (NM_001033285)",-993,"NM_001033285",226751,"Mm.259655","NM_001033285","ENSMUSG00000026490","Cdc42bpa","A930014J19Rik|DMPK-like","CDC42 binding protein kinase alpha","protein-coding"]
[7573,"chr7",123123737,123125153,"+",0,"NA","intron (NM_144925, intron 1 of 23)","CpG",560,"NM_144925",233833,"Mm.102305","NM_144925","ENSMUSG00000052707","Tnrc6a","2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6","trinucleotide repeat containing 6a","protein-coding"]
[7632,"chr7",127928834,127934587,"+",0,"NA","TTS (NM_001081374)","TTS (NM_001081374)",-1597,"NM_133351",76560,"Mm.5875","NM_133351","ENSMUSG00000030800","Prss8","2410039E18Rik|AI313909|C79772|CAP1|fr|mCAP1","protease, serine 8 (prostasin)","protein-coding"]
[6227,"chr5",73490278,73492749,"+",0,"NA","intron (NM_178896, intron 1 of 10)","CpG",487,"NM_178896",100737,"Mm.220312","NM_178896","ENSMUSG00000051674","Dcun1d4","AI836376","DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)","protein-coding"]
[2448,"chr14",50870138,50871142,"+",0,"NA","promoter-TSS (NM_009351)","promoter-TSS (NM_009351)",-86,"NM_009351",21745,"Mm.318736","NM_009351","ENSMUSG00000006281","Tep1","Tp1","telomerase associated protein 1","protein-coding"]
[2969,"chr15",102245719,102245975,"+",0,"NA","intron (NM_011244, intron 3 of 9)","intron (NM_011244, intron 3 of 9)",653,"NM_001042727",19411,"Mm.1273","NM_011244","ENSMUSG00000001288","Rarg","Nr1b3|RAR-gamma|RARD|RARgamma2","retinoic acid receptor, gamma","protein-coding"]
[7898,"chr8",70131351,70132046,"+",0,"NA","3' UTR (NM_011266, exon 9 of 9)","3' UTR (NM_011266, exon 9 of 9)",371,"NM_001025587",75692,"Mm.161167","NM_001025586","ENSMUSG00000071078","Nr2c2ap","2310073E15Rik","nuclear receptor 2C2-associated protein","protein-coding"]
[4557,"chr2",72475841,72477516,"+",0,"NA","intron (NM_025866, intron 1 of 8)","CpG",459,"NM_025866",66953,"Mm.270676","NM_025866","ENSMUSG00000055612","Cdca7","2310021G01Rik|AU044109|JPO1","cell division cycle associated 7","protein-coding"]
[2721,"chr15",58033910,58035060,"+",0,"NA","promoter-TSS (NM_029418)","promoter-TSS (NM_029418)",-191,"NM_029418",75758,"Mm.455792","NM_029418","ENSMUSG00000101892","9130401M01Rik","AI849328","RIKEN cDNA 9130401M01 gene","protein-coding"]
[3595,"chr17",46645324,46646880,"+",0,"NA","promoter-TSS (NM_029091)","promoter-TSS (NM_029091)",-119,"NM_001316742",27398,"Mm.391007","NM_025302","ENSMUSG00000002767","Mrpl2","CGI-22|L2mt|MRP-L14|MRP-L2|Rpml14","mitochondrial ribosomal protein L2","protein-coding"]
[4788,"chr2",132945001,132946892,"+",0,"NA","promoter-TSS (NM_198029)","promoter-TSS (NM_198029)",90,"NM_198029",241639,"Mm.209784","NM_198029","ENSMUSG00000027356","Fermt1","5830467P10Rik|Kindlin-1","fermitin family homolog 1 (Drosophila)","protein-coding"]
[8810,"chrX",36903239,36903834,"+",0,"NA","promoter-TSS (NM_029891)","promoter-TSS (NM_029891)",-637,"NM_029891",77286,"Mm.21649","NM_029891","ENSMUSG00000044149","Nkrf","9430034D17Rik|AW124770|C80287","NF-kappaB repressing factor","protein-coding"]
[4909,"chr2",162930556,162932949,"+",0,"NA","exon (NM_026499, exon 1 of 6)","exon (NM_026499, exon 1 of 6)",244,"NM_026499",67996,"Mm.24042","NM_026499","ENSMUSG00000016921","Srsf6","1210001E11Rik|AI314910|AW146126|Sfrs6","serine/arginine-rich splicing factor 6","protein-coding"]
[4384,"chr2",25500243,25503515,"+",0,"NA","promoter-TSS (NM_001271777)","promoter-TSS (NM_001271777)",-160,"NM_001271777",69379,"Mm.24596","NM_027062","ENSMUSG00000015083","C8g","-","complement component 8, gamma polypeptide","protein-coding"]
[8743,"chr9",123020559,123021551,"+",0,"NA","promoter-TSS (NM_025339)","promoter-TSS (NM_025339)",-271,"NM_025339",66079,"Mm.482265","NM_025339","ENSMUSG00000066233","Tmem42","0610027O18Rik|4933429E06Rik|AV003444|D9Ertd662e","transmembrane protein 42","protein-coding"]
[3331,"chr17",23563710,23564098,"+",0,"NA","non-coding (NR_126484, exon 2 of 2)","non-coding (NR_126484, exon 2 of 2)",322,"NM_001033496",449521,"Mm.268582","NM_001033496","ENSMUSG00000071256","Zfp213","BC038178|D17Ertd197e","zinc finger protein 213","protein-coding"]
[5335,"chr3",117868166,117869623,"+",0,"NA","promoter-TSS (NM_029655)","promoter-TSS (NM_029655)",42,"NM_001190156",76561,"Mm.33824","NM_029655","ENSMUSG00000028007","Snx7","2510028H01Rik","sorting nexin 7","protein-coding"]
[5148,"chr3",88409563,88410930,"+",0,"NA","TTS (NM_001281795)","TTS (NM_001281795)",151,"NM_001310605",67037,"Mm.36715","NM_025928","ENSMUSG00000028066","Pmf1","2600009M07Rik|AL033286|AW060657","polyamine-modulated factor 1","protein-coding"]
[540,"chr10",13500638,13501519,"+",0,"NA","promoter-TSS (NM_025799)","promoter-TSS (NM_025799)",50,"NM_025799",66848,"Mm.26625","NM_025799","ENSMUSG00000019810","Fuca2","0610025O11Rik|5530401P20Rik","fucosidase, alpha-L- 2, plasma","protein-coding"]
[6673,"chr6",31061141,31061825,"+",0,"NA","Intergenic","Intergenic",1264,"NR_029744",387222,null,"NR_029744","ENSMUSG00000065610","Mir29a","Mirn29a|mir-29a|mmu-mir-29a","microRNA 29a","ncRNA"]
[1615,"chr11",115765024,115766308,"+",0,"NA","intron (NM_028014, intron 1 of 31)","CpG",233,"NM_028014",71947,"Mm.23168","NM_028014","ENSMUSG00000020747","Tmem94","2310067B10Rik|Kiaa0195|mKIAA0195","transmembrane protein 94","protein-coding"]
[3065,"chr16",18247821,18249760,"+",0,"NA","promoter-TSS (NM_001080999)","promoter-TSS (NM_001080999)",-93,"NM_001080999",15547,"Mm.271798","NM_008307","ENSMUSG00000022721","Trmt2a","Htf9c","TRM2 tRNA methyltransferase 2A","protein-coding"]
[7959,"chr8",75093174,75094065,"+",0,"NA","promoter-TSS (NM_010442)","promoter-TSS (NM_010442)",1,"NM_010442",15368,"Mm.276389","NM_010442","ENSMUSG00000005413","Hmox1","D8Wsu38e|HO-1|HO1|Hemox|Hmox|Hsp32","heme oxygenase 1","protein-coding"]
[2073,"chr13",34111835,34113910,"+",0,"NA","intron (NR_046184, intron 1 of 4)","intron (NR_046184, intron 1 of 4)",400,"NR_046184",432745,"Mm.159104","NR_046184",null,"4930447K03Rik","-","RIKEN cDNA 4930447K03 gene","ncRNA"]
[2406,"chr14",31829473,31831230,"+",0,"NA","promoter-TSS (NM_001024604)","promoter-TSS (NM_001024604)",64,"NM_001024604",105522,"Mm.37660","NM_001024604","ENSMUSG00000014496","Ankrd28","AI465466|AI604979|E430019N21Rik|mKIAA0379","ankyrin repeat domain 28","protein-coding"]
[76,"chr1",42850963,42851676,"+",0,"NA","promoter-TSS (NM_023514)","promoter-TSS (NM_023514)",86,"NM_023514",69527,"Mm.252982","NM_023514","ENSMUSG00000060679","Mrps9","2310002A08Rik|AW322516|Mrp-S9|S9mt|mg637","mitochondrial ribosomal protein S9","protein-coding"]
[7621,"chr7",127573830,127574059,"+",0,"NA","exon (NM_026888, exon 2 of 10)","exon (NM_026888, exon 2 of 10)",596,"NM_026888",68961,"Mm.274473","NM_026888","ENSMUSG00000030815","Phkg2","1500017I02Rik","phosphorylase kinase, gamma 2 (testis)","protein-coding"]
[982,"chr11",6199070,6200984,"+",0,"NA","exon (NM_173748, exon 1 of 6)","exon (NM_173748, exon 1 of 6)",424,"NM_173748",209586,"Mm.25321","NM_173748","ENSMUSG00000053838","Nudcd3","AI427847|BC024322|mKIAA1068","NudC domain containing 3","protein-coding"]
[8752,"chr9",123850280,123852781,"+",0,"NA","TTS (NM_011798)","TTS (NM_011798)",131,"NM_148925",17281,"Mm.252941","NM_148925","ENSMUSG00000025241","Fyco1","2810409M01Rik|Mem2|RUFY3|ZFYVE7","FYVE and coiled-coil domain containing 1","protein-coding"]
[2592,"chr14",79389932,79391068,"+",0,"NA","intron (NM_025832, intron 1 of 19)","CpG",168,"NM_025832",66897,"Mm.24425","NM_025832","ENSMUSG00000022020","Naa16","1300019C06Rik|Narg1l","N(alpha)-acetyltransferase 16, NatA auxiliary subunit","protein-coding"]
[7646,"chr7",130573921,130578930,"+",0,"NA","Intergenic","Intergenic",-1059,"NM_001004468",57752,"Mm.86322","NM_021314","ENSMUSG00000030852","Tacc2","mKIAA4180","transforming, acidic coiled-coil containing protein 2","protein-coding"]
[8151,"chr8",111643081,111644590,"+",0,"NA","intron (NM_011742, intron 1 of 3)","CpG",392,"NM_011742",22640,"Mm.4184","NM_011742","ENSMUSG00000055835","Zfp1","Fnp-1|Zfp-1|mkr-1","zinc finger protein 1","protein-coding"]
[1345,"chr11",82763779,82765083,"+",0,"NA","promoter-TSS (NM_025884)","promoter-TSS (NM_025884)",86,"NM_025884",66983,"Mm.29622","NM_025884",null,"Zfp830","2410003C20Rik|AV301118|AW048207|Ccdc16|Omcg1|Znf830","zinc finger protein 830","protein-coding"]
[2290,"chr13",100650423,100652283,"+",0,"NA","promoter-TSS (NM_001283011)","promoter-TSS (NM_001283011)",10,"NM_027592",102216272,"Mm.301148","NM_027592","ENSMUSG00000078941","Ak6","2810046E22Rik|4921516M08Rik|AK/ATPase","adenylate kinase 6","protein-coding"]
[4431,"chr2",30123815,30125207,"+",0,"NA","promoter-TSS (NM_001290503)","promoter-TSS (NM_001290503)",100,"NM_178694",227693,"Mm.44526","NM_178694","ENSMUSG00000039686","Zer1","C230075L19Rik|Zyg11bl","zyg-11 related, cell cycle regulator","protein-coding"]
[1123,"chr11",54025867,54029328,"+",0,"NA","exon (NM_019687, exon 1 of 10)","exon (NM_019687, exon 1 of 10)",493,"NM_019687",30805,"Mm.274590","NM_019687","ENSMUSG00000020334","Slc22a4","Octn1","solute carrier family 22 (organic cation transporter), member 4","protein-coding"]
[758,"chr10",80432789,80436646,"+",0,"NA","Intergenic","B1_Mur1|SINE|Alu",-1064,"NM_001164148",21423,"Mm.3406","NM_011548","ENSMUSG00000020167","Tcf3","A1|AA408400|ALF2|AW209082|E12|E12/E47|E2A|E47|ME2|Pan1|Pan2|TCF-3|Tcfe2a|VDIR|bHLHb21","transcription factor 3","protein-coding"]
[6351,"chr5",114772927,114775689,"+",0,"NA","promoter-TSS (NM_001077360)","promoter-TSS (NM_001077360)",675,"NR_027872",67642,"Mm.482535","NM_175120","ENSMUSG00000092183","4930515G01Rik","-","RIKEN cDNA 4930515G01 gene","ncRNA"]
[5902,"chr4",136179748,136181890,"+",0,"NA","promoter-TSS (NM_001305399)","promoter-TSS (NM_001305399)",37,"NM_001305399",242705,"Mm.307932","NM_177733","ENSMUSG00000018983","E2f2","E2F-2","E2F transcription factor 2","protein-coding"]
[14,"chr1",10231960,10233468,"+",0,"NA","promoter-TSS (NM_001102430)","promoter-TSS (NM_001102430)",-44,"NM_001102430",211673,"Mm.229141","NM_001102430","ENSMUSG00000067851","Arfgef1","ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200","ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)","protein-coding"]
[4761,"chr2",129294508,129298058,"+",0,"NA","intron (NM_181589, intron 2 of 8)","intron (NM_181589, intron 2 of 8)",929,"NM_181589",70466,"Mm.45785","NM_181589","ENSMUSG00000048327","Ckap2l","2010016H04Rik|2610318C08Rik|AV070319|radmis|rdm","cytoskeleton associated protein 2-like","protein-coding"]
[2587,"chr14",77036058,77039382,"+",0,"NA","intron (NM_001310648, intron 1 of 6)","intron (NM_001310648, intron 1 of 6)",948,"NM_001310649",108811,"Mm.102168","NM_175369","ENSMUSG00000034795","Ccdc122","4933415L06Rik","coiled-coil domain containing 122","protein-coding"]
[2328,"chr13",119428356,119430109,"+",0,"NA","intron (NM_145457, intron 1 of 10)","CpG",330,"NM_145457",218693,"Mm.490243","NM_145457","ENSMUSG00000025451","Paip1","PAIP-1","polyadenylate binding protein-interacting protein 1","protein-coding"]
[5630,"chr4",99929583,99931073,"+",0,"NA","intron (NM_028132, intron 1 of 10)","intron (NM_028132, intron 1 of 10)",877,"NM_028132",72157,"Mm.217764","NM_028132","ENSMUSG00000025791","Pgm2","2610020G18Rik|AA407108|AI098105|Pgm-2|Pgm1","phosphoglucomutase 2","protein-coding"]
[2889,"chr15",89089131,89090025,"+",0,"NA","exon (NM_027905, exon 1 of 9)","exon (NM_027905, exon 1 of 9)",471,"NM_027905",223776,"Mm.44763","NM_027905","ENSMUSG00000035757","Selo","1300018J18Rik","selenoprotein O","protein-coding"]
[3786,"chr18",20553249,20559402,"+",0,"NA","Intergenic","Intergenic",-1791,"NM_007883",13511,"Mm.345891","NM_007883","ENSMUSG00000044393","Dsg2","AA408168|D18Ertd293e","desmoglein 2","protein-coding"]
[234,"chr1",92641247,92642166,"+",0,"NA","non-coding (NR_028108, exon 1 of 3)","non-coding (NR_028108, exon 1 of 3)",242,"NR_028108",66915,"Mm.30179","NM_001163425","ENSMUSG00000073616","Myeov2","1110002M09Rik","myeloma overexpressed 2","protein-coding"]
[7867,"chr8",60890547,60890741,"+",0,"NA","intron (NM_028299, intron 1 of 7)","CpG",193,"NM_028299",72612,"Mm.25263","NM_028299","ENSMUSG00000038005","2700029M09Rik","C230006B22Rik","RIKEN cDNA 2700029M09 gene","protein-coding"]
[594,"chr10",39612244,39615280,"+",0,"NA","intron (NM_134000, intron 1 of 8)","intron (NM_134000, intron 1 of 8)",828,"NM_134000",103213,"Mm.436686","NM_134000","ENSMUSG00000019842","Traf3ip2","AI429613|Act1|CIKS","TRAF3 interacting protein 2","protein-coding"]
[2924,"chr15",98727789,98727943,"+",0,"NA","intron (NM_024169, intron 1 of 5)","intron (NM_024169, intron 1 of 5)",332,"NM_024169",66120,"Mm.30729","NM_024169","ENSMUSG00000003355","Fkbp11","1110002O23Rik|FKBP-11","FK506 binding protein 11","protein-coding"]
[6746,"chr6",52215701,52222026,"+",0,"NA","promoter-TSS (NM_010455)","promoter-TSS (NM_010455)",-290,"NM_010455",15404,"Mm.294826","NM_010455",null,"Hoxa7","AV118143|Hox-1.1|M6","homeobox A7","protein-coding"]
[4580,"chr2",80638902,80639132,"+",0,"NA","promoter-TSS (NM_001190179)","promoter-TSS (NM_001190179)",205,"NM_027091",69482,"Mm.29200","NM_027091",null,"Nup35","2310006I24Rik|35kDa|5330402E05Rik|MP44|NO44","nucleoporin 35","protein-coding"]
[5213,"chr3",94341764,94345392,"+",0,"NA","intron (NM_025416, intron 2 of 5)","(CA)n|Simple_repeat|Simple_repeat",1479,"NM_025416",66198,"Mm.180200","NM_025416","ENSMUSG00000028148","Them5","1110007B02Rik|1110038F21Rik","thioesterase superfamily member 5","protein-coding"]
[4302,"chr19",60789525,60791446,"+",0,"NA","exon (NM_010123, exon 1 of 22)","exon (NM_010123, exon 1 of 22)",208,"NM_010123",13669,"Mm.2238","NM_010123","ENSMUSG00000024991","Eif3a","A830012B05Rik|Csma|Eif3|Eif3s10|mKIAA0139","eukaryotic translation initiation factor 3, subunit A","protein-coding"]
[3554,"chr17",36270670,36272860,"+",0,"NA","promoter-TSS (NM_178281)","promoter-TSS (NM_178281)",239,"NM_024468",79263,"Mm.40624","NM_024468","ENSMUSG00000045409","Trim39","1100001D15Rik|E130103K13Rik|RBCC-B30.2|Rnf23|mKIAA4179|tfp","tripartite motif-containing 39","protein-coding"]
[6158,"chr5",36464533,36466055,"+",0,"NA","promoter-TSS (NR_126490)","promoter-TSS (NR_126490)",109,"NM_024478",17713,"Mm.21535","NM_024478","ENSMUSG00000029198","Grpel1","AA408748|mt-GrpE#1|mt-Grpel1","GrpE-like 1, mitochondrial","protein-coding"]
[6936,"chr6",120771749,120772402,"+",0,"NA","TTS (NM_001128151)","TTS (NM_001128151)",-1693,"NM_001081048",71803,"Mm.425340","NM_001081048","ENSMUSG00000004902","Slc25a18","1500015I14Rik|AW125787","solute carrier family 25 (mitochondrial carrier), member 18","protein-coding"]
[6551,"chr5",139736060,139738682,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-1038,"NM_174850",231830,"Mm.240510","NM_174850","ENSMUSG00000036718","Micall2","A930021H16Rik|JRAB|MICAL-L2|mFLJ00139","MICAL-like 2","protein-coding"]
[6107,"chr5",30666353,30667213,"+",0,"NA","promoter-TSS (NM_001302130)","promoter-TSS (NM_001302130)",-103,"NM_007681",12615,"Mm.290563","NM_007681","ENSMUSG00000029177","Cenpa","Cenp-A","centromere protein A","protein-coding"]
[3116,"chr16",30596754,30600342,"+",0,"NA","Intergenic","Intergenic",-1175,"NM_177632",224093,"Mm.28244","NM_177632","ENSMUSG00000046546","Fam43a","Tuf1","family with sequence similarity 43, member A","protein-coding"]
[1000,"chr11",16507258,16508843,"+",0,"NA","intron (NM_011343, intron 1 of 3)","CpG",434,"NM_011343",20335,"Mm.325350","NM_011343","ENSMUSG00000078974","Sec61g","-","SEC61, gamma subunit","protein-coding"]
[43,"chr1",36067886,36069910,"+",0,"NA","exon (NM_015818, exon 1 of 2)","exon (NM_015818, exon 1 of 2)",498,"NM_015818",50785,"Mm.213566","NM_015818","ENSMUSG00000045216","Hs6st1","6Ost1","heparan sulfate 6-O-sulfotransferase 1","protein-coding"]
[8410,"chr9",54501304,54501602,"+",0,"NA","5' UTR (NM_172771, exon 1 of 44)","5' UTR (NM_172771, exon 1 of 44)",173,"NM_172771",235380,"Mm.93636","NM_172771","ENSMUSG00000041268","Dmxl2","6330586A12|6430411K14Rik|E130119P06Rik|mKIAA0856","Dmx-like 2","protein-coding"]
[6012,"chr4",155066311,155068589,"+",0,"NA","intron (NM_001042407, intron 1 of 5)","intron (NM_001042407, intron 1 of 5)",420,"NM_001042407",668173,"Mm.133114","NM_001042407","ENSMUSG00000029047","Pex10","AV128229|Gm142","peroxisomal biogenesis factor 10","protein-coding"]
[2582,"chr14",75844239,75846129,"+",0,"NA","promoter-TSS (NM_009429)","promoter-TSS (NM_009429)",-72,"NM_009429",22070,"Mm.297482","NM_009429",null,"Tpt1","TCTP|Trt|p21|p23","tumor protein, translationally-controlled 1","protein-coding"]
[6669,"chr6",30401317,30402478,"+",0,"NA","promoter-TSS (NM_029742)","promoter-TSS (NM_029742)",42,"NM_001311087",76788,"Mm.277308","NM_029742","ENSMUSG00000029775","Klhdc10","2410127E18Rik|AI593221|mKIAA0265","kelch domain containing 10","protein-coding"]
[3502,"chr17",34603107,34603619,"+",0,"NA","exon (NM_019403, exon 1 of 6)","exon (NM_019403, exon 1 of 6)",198,"NM_019403",54197,"Mm.274542","NM_019403","ENSMUSG00000015478","Rnf5","2410131O05Rik|AA407576|NG2","ring finger protein 5","protein-coding"]
[7887,"chr8",69624737,69625907,"+",0,"NA","promoter-TSS (NM_001045553)","promoter-TSS (NM_001045553)",-147,"NM_001045553",234362,"Mm.458487","NM_172754","ENSMUSG00000060427","Zfp868","AI449175|AW108241|C530032E20|mszf62","zinc finger protein 868","protein-coding"]
[3955,"chr18",77064464,77066097,"+",0,"NA","promoter-TSS (NM_001164168)","promoter-TSS (NM_001164168)",72,"NM_001164167",17344,"Mm.6370","NM_008602","ENSMUSG00000025423","Pias2","6330408K17Rik|AI462206|ARIP3|AU018068|Dib|Miz1|PIASxalpha|PIASxb|PIASxbeta|SIZ2","protein inhibitor of activated STAT 2","protein-coding"]
[5367,"chr3",133543076,133545040,"+",0,"NA","intron (NM_001040400, intron 1 of 10)","intron (NM_001040400, intron 1 of 10)",332,"NM_001040400",214133,"Mm.347816","NM_145989","ENSMUSG00000040943","Tet2","Ayu17-449|E130014J05Rik|mKIAA1546","tet methylcytosine dioxygenase 2","protein-coding"]
[193,"chr1",80213454,80213963,"+",0,"NA","5' UTR (NM_173425, exon 1 of 2)","5' UTR (NM_173425, exon 1 of 2)",236,"NM_173425",241128,"Mm.145511","NM_173425","ENSMUSG00000043230","Fam124b","A830043J08Rik","family with sequence similarity 124, member B","protein-coding"]
[288,"chr1",128416530,128417848,"+",0,"NA","exon (NM_177445, exon 1 of 16)","exon (NM_177445, exon 1 of 16)",227,"NM_177445",226414,"Mm.28693","NM_145507","ENSMUSG00000026356","Dars","5730439G15Rik","aspartyl-tRNA synthetase","protein-coding"]
[119,"chr1",58652587,58653004,"+",0,"NA","intron (NR_045007, intron 1 of 1)","intron (NR_045007, intron 1 of 1)",154,"NR_045007",100504501,"Mm.440933","NR_045007","ENSMUSG00000102059","Gm20257","-","caspase 8 pseudogene","pseudo"]
[4875,"chr2",155929418,155930667,"+",0,"NA","non-coding (NR_024487, exon 1 of 10)","non-coding (NR_024487, exon 1 of 10)",268,"NM_018888",56046,"Mm.158827","NM_018888","ENSMUSG00000005882","Uqcc1","2310079L17Rik|2410003P15Rik|3110038N19Rik|Bfzb|Bfzp|Cbp3|Uqcc","ubiquinol-cytochrome c reductase complex assembly factor 1","protein-coding"]
[7859,"chr8",53511855,53512401,"+",0,"NA","intron (NM_001005847, intron 1 of 8)","intron (NM_001005847, intron 1 of 8)",426,"NM_001005847",11593,"Mm.334535","NM_001005847","ENSMUSG00000031521","Aga","AW060726","aspartylglucosaminidase","protein-coding"]
[5227,"chr3",95110949,95111650,"+",0,"NA","intron (NM_009336, intron 1 of 5)","intron (NM_009336, intron 1 of 5)",257,"NM_009336",21427,"Mm.133919","NM_009336","ENSMUSG00000008958","Vps72","Tcfl1|YL-1","vacuolar protein sorting 72 (yeast)","protein-coding"]
[5954,"chr4",144463534,144465908,"+",0,"NA","promoter-TSS (NM_001085503)","promoter-TSS (NM_001085503)",-965,"NM_001085503",230883,"Mm.457844","NM_001085503","ENSMUSG00000078507","Aadacl3","Gm435","arylacetamide deacetylase-like 3","protein-coding"]
[4730,"chr2",122700417,122704129,"+",0,"NA","exon (NM_011774, exon 1 of 7)","exon (NM_011774, exon 1 of 7)",390,"NM_011774",22785,"Mm.27801","NM_011774","ENSMUSG00000005802","Slc30a4","Znt4|lm|znT-4","solute carrier family 30 (zinc transporter), member 4","protein-coding"]
[7946,"chr8",72219767,72220473,"+",0,"NA","intron (NM_026455, intron 2 of 3)","intron (NM_026455, intron 2 of 3)",390,"NM_026455",67922,"Mm.28327","NM_026455","ENSMUSG00000003039","Fam32a","2510049I19Rik|AW822030|OTAG-12|Otag12","family with sequence similarity 32, member A","protein-coding"]
[4438,"chr2",30357628,30359207,"+",0,"NA","intron (NM_139302, intron 1 of 10)","intron (NM_139302, intron 1 of 10)",899,"NM_139302",227700,"Mm.33343","NM_139302","ENSMUSG00000026860","Sh3glb2","SPAS-1","SH3-domain GRB2-like endophilin B2","protein-coding"]
[8515,"chr9",70678262,70680003,"+",0,"NA","5' UTR (NM_007399, exon 1 of 16)","5' UTR (NM_007399, exon 1 of 16)",131,"NM_007399",11487,"Mm.3037","NM_007399","ENSMUSG00000054693","Adam10","1700031C13Rik|MADM|kuz|kuzbanian","a disintegrin and metallopeptidase domain 10","protein-coding"]
[2118,"chr13",47042885,47044331,"+",0,"NA","promoter-TSS (NM_016785)","promoter-TSS (NM_016785)",109,"NM_172262",218214,"Mm.31259","NM_172262","ENSMUSG00000038080","Kdm1b","4632428N09Rik|AI482520|Aof1","lysine (K)-specific demethylase 1B","protein-coding"]
[415,"chr1",171287584,171289078,"+",0,"NA","promoter-TSS (NM_013919)","promoter-TSS (NM_013919)",-370,"NM_013919",30941,"Mm.27510","NM_013919","ENSMUSG00000053483","Usp21","ESTM28|Usp16|Usp23|W53272","ubiquitin specific peptidase 21","protein-coding"]
[8904,"chrX",101639558,101640930,"+",0,"NA","promoter-TSS (NM_001290535)","promoter-TSS (NM_001290535)",26,"NM_001290535",108155,"Mm.487332","NM_139144","ENSMUSG00000034160","Ogt","1110038P24Rik|4831420N21Rik|AI115525|Ogtl","O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)","protein-coding"]
[4196,"chr19",37173193,37175981,"+",0,"NA","exon (NM_198300, exon 2 of 11)","exon (NM_198300, exon 2 of 11)",744,"NR_045329",319931,"Mm.446730","NR_045329","ENSMUSG00000097591","A330032B11Rik","-","RIKEN cDNA A330032B11 gene","ncRNA"]
[3987,"chr19",3970028,3974269,"+",0,"NA","promoter-TSS (NM_001177438)","promoter-TSS (NM_001177438)",-180,"NM_001177438",621603,"Mm.34137","NM_001177438","ENSMUSG00000075296","Aldh3b2","AI848594|C130048D07Rik","aldehyde dehydrogenase 3 family, member B2","protein-coding"]
[2597,"chr14",87140384,87141718,"+",0,"NA","promoter-TSS (NM_019670)","promoter-TSS (NM_019670)",63,"NM_019670",56419,"Mm.440585","NM_019670","ENSMUSG00000022021","Diaph3","4930417P13Rik|Dia2|Diap3|Drf3|mDia2|mKIAA4117|p134MDia2","diaphanous related formin 3","protein-coding"]
[1292,"chr11",76027252,76027913,"+",0,"NA","exon (NM_029658, exon 1 of 3)","exon (NM_029658, exon 1 of 3)",200,"NM_029658",76566,"Mm.34131","NM_029658","ENSMUSG00000020846","Fam101b","1500005K14Rik|RefilinB|cfm","family with sequence similarity 101, member B","protein-coding"]
[8370,"chr9",44963980,44966255,"+",0,"NA","intron (NM_145400, intron 1 of 19)","intron (NM_145400, intron 1 of 19)",483,"NM_145400",140630,"Mm.215069","NM_145400","ENSMUSG00000059890","Ube4a","4732444G18Rik|9930123J21Rik|UFD2b","ubiquitination factor E4A","protein-coding"]
[5441,"chr4",11253602,11254566,"+",0,"NA","exon (NM_001159595, exon 1 of 27)","exon (NM_001159595, exon 1 of 27)",175,"NM_178112",72656,"Mm.246713","NM_178112","ENSMUSG00000040738","Ints8","2810013E07Rik|AV063769|D130008D20Rik","integrator complex subunit 8","protein-coding"]
[1356,"chr11",83941830,83942899,"+",0,"NA","intron (NM_030096, intron 1 of 14)","CpG",274,"NM_030096",78394,"Mm.280544","NM_030096","ENSMUSG00000020677","Ddx52","2700029C06Rik|ROK1","DEAD (Asp-Glu-Ala-Asp) box polypeptide 52","protein-coding"]
[5208,"chr3",92869249,92870713,"+",0,"NA","intron (NM_025621, intron 1 of 1)","intron (NM_025621, intron 1 of 1)",224,"NM_025621",66533,"Mm.144259","NM_025621","ENSMUSG00000090314","2310050C09Rik","-","RIKEN cDNA 2310050C09 gene","protein-coding"]
[1153,"chr11",59225877,59228982,"+",0,"NA","intron (NM_007476, intron 1 of 4)","CpG",733,"NM_001130408",11840,"Mm.371546","NM_007476","ENSMUSG00000048076","Arf1","-","ADP-ribosylation factor 1","protein-coding"]
[1871,"chr12",80643080,80644945,"+",0,"NA","promoter-TSS (NM_026244)","promoter-TSS (NM_026244)",-151,"NM_007951",13877,"Mm.246551","NM_007951",null,"Erh","Mer|Prei1","enhancer of rudimentary homolog (Drosophila)","protein-coding"]
[5209,"chr3",93144072,93144575,"+",0,"NA","promoter-TSS (NM_001081200)","promoter-TSS (NM_001081200)",-464,"NM_001081200",381457,"Mm.458570","NM_001081200","ENSMUSG00000078657","Crnn","Gm1015","cornulin","protein-coding"]
[7843,"chr8",45410124,45411749,"+",0,"NA","promoter-TSS (NM_126166)","promoter-TSS (NM_126166)",-397,"NM_126166",142980,"Mm.33874","NM_126166","ENSMUSG00000031639","Tlr3","AI957183","toll-like receptor 3","protein-coding"]
[4463,"chr2",32422847,32426423,"+",0,"NA","promoter-TSS (NM_001290558)","promoter-TSS (NM_001290558)",-569,"NM_001290558",227731,"Mm.37395","NM_146118","ENSMUSG00000026819","Slc25a25","1110030N17Rik|MCSC|mKIAA1896","solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25","protein-coding"]
[2795,"chr15",76879244,76882089,"+",0,"NA","intron (NM_145916, intron 1 of 4)","intron (NM_145916, intron 1 of 4)",1390,"NM_145916",223669,"Mm.38948","NM_145916","ENSMUSG00000033669","Zfp7","KRAB20|KRAB7|Krox-2|Zfp-7|Zfp65|Zfp80|Zfp86-rs1|mszf73-2","zinc finger protein 7","protein-coding"]
[8517,"chr9",71484881,71485941,"+",0,"NA","promoter-TSS (NM_001164793)","promoter-TSS (NM_001164793)",-453,"NM_001164793",28015,"Mm.21094","NM_178602","ENSMUSG00000032199","Polr2m","AA407243|AA408799|AI303746|AW553238|D9Wsu138e|Grinl1a|mKIAA4185","polymerase (RNA) II (DNA directed) polypeptide M","protein-coding"]
[4830,"chr2",151541819,151543229,"+",0,"NA","promoter-TSS (NM_001302080)","promoter-TSS (NM_001302080)",41,"NM_001302078",14225,"Mm.278458","NM_008019","ENSMUSG00000032966","Fkbp1a","FKBP12|Fkbp|Fkbp1","FK506 binding protein 1a","protein-coding"]
[8123,"chr8",107292837,107294990,"+",0,"NA","intron (NM_001286260, intron 1 of 12)","CpG",443,"NM_133957",54446,"Mm.390057","NM_018823","ENSMUSG00000003847","Nfat5","AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz","nuclear factor of activated T cells 5","protein-coding"]
[3912,"chr18",62977396,62978787,"+",0,"NA","intron (NM_028017, intron 1 of 11)","CpG",175,"NM_028017",108123,"Mm.292687","NM_028017","ENSMUSG00000024581","Napg","2400003O04Rik|SNARE","N-ethylmaleimide sensitive fusion protein attachment protein gamma","protein-coding"]
[6500,"chr5",136116723,136117366,"+",0,"NA","intron (NM_011293, intron 1 of 3)","MIR3|SINE|MIR",353,"NM_011293",20022,"Mm.4896","NM_011293","ENSMUSG00000039771","Polr2j","14.5kDa|Polr2i|Rpb11a|Rpo2-4","polymerase (RNA) II (DNA directed) polypeptide J","protein-coding"]
[6637,"chr6",11925395,11926627,"+",0,"NA","5' UTR (NM_029404, exon 1 of 17)","5' UTR (NM_029404, exon 1 of 17)",130,"NM_001168382",75725,"Mm.212411","NM_029404","ENSMUSG00000029629","Phf14","1110001C23Rik|4932409F11Rik|5730446A07Rik|AA623952|AV297001|mKIAA0783","PHD finger protein 14","protein-coding"]
[784,"chr10",81495672,81497104,"+",0,"NA","promoter-TSS (NM_134009)","promoter-TSS (NM_134009)",-25,"NM_134009",103425,"Mm.302791","NM_134009","ENSMUSG00000020238","Ncln","3100002P13Rik|AW120537","nicalin homolog (zebrafish)","protein-coding"]
[7601,"chr7",127025500,127027991,"+",0,"NA","promoter-TSS (NM_010772)","promoter-TSS (NM_010772)",-266,"NM_010772",17188,"Mm.378964","NM_010772","ENSMUSG00000030678","Maz","PUR1|Pur-1|SAF-1|SAF-2","MYC-associated zinc finger protein (purine-binding transcription factor)","protein-coding"]
[6300,"chr5",105699437,105700568,"+",0,"NA","promoter-TSS (NM_001122768)","promoter-TSS (NM_001122768)",33,"NM_001122768",231549,"Mm.23837","NM_178701","ENSMUSG00000046079","Lrrc8d","2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5","leucine rich repeat containing 8D","protein-coding"]
[1844,"chr12",73964213,73965094,"+",0,"NA","exon (NM_178392, exon 1 of 10)","exon (NM_178392, exon 1 of 10)",123,"NM_178392",75627,"Mm.25937","NM_178392","ENSMUSG00000021113","Snapc1","2700033G17Rik|AU015787","small nuclear RNA activating complex, polypeptide 1","protein-coding"]
[5765,"chr4",124700872,124701206,"+",0,"NA","intron (NM_010213, intron 1 of 5)","intron (NM_010213, intron 1 of 5)",340,"NM_010213",14201,"Mm.331856","NM_010213","ENSMUSG00000032643","Fhl3","SLIM2","four and a half LIM domains 3","protein-coding"]
[7186,"chr7",28070590,28070758,"+",0,"NA","promoter-TSS (NM_001122603)","promoter-TSS (NM_001122603)",-562,"NM_001122603",215384,"Mm.292276","NM_175444","ENSMUSG00000047730","Fcgbp","A430096B05Rik","Fc fragment of IgG binding protein","protein-coding"]
[762,"chr10",80602271,80604825,"+",0,"NA","intron (NM_019575, intron 1 of 6)","ZP3AR|Satellite|Satellite",666,"NM_019575",56214,"Mm.273170","NM_019575","ENSMUSG00000078441","Scamp4","2410022D05Rik|AI448940|AU022392|AW742369|Sc4","secretory carrier membrane protein 4","protein-coding"]
[4619,"chr2",93182729,93188770,"+",0,"NA","Intergenic","Intergenic",-1835,"NM_001025246",277414,"Mm.41033","NM_001025246","ENSMUSG00000068735","Trp53i11","Tp53i11","transformation related protein 53 inducible protein 11","protein-coding"]
[5281,"chr3",103787060,103791682,"+",0,"NA","intron (NM_001301304, intron 1 of 15)","intron (NM_001301304, intron 1 of 15)",1904,"NM_001301306",15257,"Mm.20827","NM_010432","ENSMUSG00000008730","Hipk1","1110062K04Rik|Myak","homeodomain interacting protein kinase 1","protein-coding"]
[6118,"chr5",31240517,31241861,"+",0,"NA","intron (NM_147201, intron 1 of 17)","CpG",271,"NM_147201",192292,"Mm.292040","NM_147201","ENSMUSG00000029148","Nrbp1","B230344L17Rik|Nrbp","nuclear receptor binding protein 1","protein-coding"]
[5708,"chr4",116806378,116808190,"+",0,"NA","promoter-TSS (NM_133250)","promoter-TSS (NM_133250)",275,"NM_026654",68276,"Mm.30534","NM_026654","ENSMUSG00000028688","Toe1","4930584N22Rik|4933424D16Rik|AI413517","target of EGR1, member 1 (nuclear)","protein-coding"]
[2205,"chr13",67483803,67484813,"+",0,"NA","promoter-TSS (NM_001076791)","promoter-TSS (NM_001076791)",-55,"NM_001076791",408067,"Mm.315879","NM_001076791","ENSMUSG00000059839","Zfp874b","9630025I21Rik|Rslcan16","zinc finger protein 874b","protein-coding"]
[8071,"chr8",95806217,95808495,"+",0,"NA","non-coding (NR_015574, exon 1 of 4)","non-coding (NR_015574, exon 1 of 4)",106,"NM_178078",234594,"Mm.259220","NM_153164","ENSMUSG00000036550","Cnot1","6030411K04Rik|AA815922|D830048B13","CCR4-NOT transcription complex, subunit 1","protein-coding"]
[7965,"chr8",78820514,78821085,"+",0,"NA","intron (NM_001191004, intron 1 of 4)","CpG",353,"NM_001191004",78651,"Mm.28694","NM_030145","ENSMUSG00000031683","Lsm6","1500031N17Rik|2410088K19Rik|AI747288","LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)","protein-coding"]
[8292,"chr9",21411900,21412258,"+",0,"NA","promoter-TSS (NR_045742)","promoter-TSS (NR_045742)",242,"NM_021888",60507,"Mm.436579","NM_021888","ENSMUSG00000002825","Qtrt1","2610028E17Rik|Tgt","queuine tRNA-ribosyltransferase 1","protein-coding"]
[6349,"chr5",114443801,114445439,"+",0,"NA","promoter-TSS (NM_029956)","promoter-TSS (NM_029956)",351,"NM_023556",17855,"Mm.28088","NM_023556","ENSMUSG00000041939","Mvk","2310010A05Rik|AI256848|AI414037|MK","mevalonate kinase","protein-coding"]
[7593,"chr7",126791721,126795238,"+",0,"NA","Intergenic","B1_Mm|SINE|Alu",-1008,"NM_019674",56420,"Mm.41998","NM_019674","ENSMUSG00000030697","Ppp4c","1110002D08Rik|AU016079|Ppx","protein phosphatase 4, catalytic subunit","protein-coding"]
[22,"chr1",16655459,16658147,"+",0,"NA","promoter-TSS (NR_037998)","promoter-TSS (NR_037998)",62,"NM_026456",67923,"Mm.289248","NM_026456","ENSMUSG00000079658","Tceb1","2610043E24Rik|2610301I15Rik|AA407206|AI987979|AW049146","transcription elongation factor B (SIII), polypeptide 1","protein-coding"]
[205,"chr1",86153914,86155062,"+",0,"NA","promoter-TSS (NM_027456)","promoter-TSS (NM_027456)",-292,"NM_030184",78795,"Mm.379264","NM_027456","ENSMUSG00000062590","Armc9","3830422A13Rik|4831423D23Rik|4930438O05Rik|5730415N24Rik","armadillo repeat containing 9","protein-coding"]
[3296,"chr17",10317546,10320464,"+",0,"NA","promoter-TSS (NR_037588)","promoter-TSS (NR_037588)",356,"NM_021881",19317,"Mm.130694","NM_021881","ENSMUSG00000062078","Qk","1110003F05Rik|1500005P18|QkI|l(17)-1Wis|l17Wis1","quaking","protein-coding"]
[5730,"chr4",118540796,118544884,"+",0,"NA","intron (NM_172383, intron 2 of 3)","intron (NM_172383, intron 2 of 3)",886,"NM_172383",230678,"Mm.23639","NM_172383","ENSMUSG00000050854","Tmem125","6330530A05Rik|AV223516","transmembrane protein 125","protein-coding"]
[2681,"chr15",34494914,34495787,"+",0,"NA","promoter-TSS (NM_008287)","promoter-TSS (NM_008287)",39,"NM_152894",67724,"Mm.248779","NM_026340","ENSMUSG00000022325","Pop1","4932434G09Rik","processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)","protein-coding"]
[8013,"chr8",85015698,85016413,"+",0,"NA","Intergenic","Intergenic",-1524,"NR_052011",212989,"Mm.215154","NM_001130194","ENSMUSG00000052819","Best2","Vmd2l1","bestrophin 2","protein-coding"]
[1260,"chr11",72301367,72302438,"+",0,"NA","intron (NM_001291153, intron 1 of 3)","intron (NM_001291153, intron 1 of 3)",273,"NM_001037713",327959,"Mm.291131","NM_001037713","ENSMUSG00000040483","Xaf1","Fbox39","XIAP associated factor 1","protein-coding"]
[8636,"chr9",107534097,107534937,"+",0,"NA","exon (NM_019704, exon 1 of 2)","exon (NM_019704, exon 1 of 2)",572,"NM_019704",56395,"Mm.260153","NM_019704","ENSMUSG00000010045","Tmem115","C78915|Pl6|Pp6","transmembrane protein 115","protein-coding"]
[874,"chr10",117844248,117846955,"+",0,"NA","intron (NM_024457, intron 1 of 7)","GC_rich|Low_complexity|Low_complexity",373,"NM_024457",215449,"Mm.233009","NM_024457","ENSMUSG00000052681","Rap1b","2810443E11Rik","RAS related protein 1b","protein-coding"]
[1708,"chr12",3425709,3427930,"+",0,"NA","promoter-TSS (NM_001270988)","promoter-TSS (NM_001270988)",-38,"NM_001270988",75302,"Mm.120475","NM_172421","ENSMUSG00000037486","Asxl2","4930556B16Rik|mKIAA1685","additional sex combs like 2 (Drosophila)","protein-coding"]
[2220,"chr13",73327837,73329706,"+",0,"NA","promoter-TSS (NM_010888)","promoter-TSS (NM_010888)",-289,"NM_010888",407785,"Mm.29897","NM_010888","ENSMUSG00000021606","Ndufs6","BC059730|IP13","NADH dehydrogenase (ubiquinone) Fe-S protein 6","protein-coding"]
[2528,"chr14",61679294,61683711,"+",0,"NA","intron (NR_028264, intron 1 of 6)","CpG",871,"NR_028264",668253,"Mm.32886","NR_028264","ENSMUSG00000097589","Dleu2","1810047A16Rik|4932411A06Rik|7730401J12Rik|AI197277|AI788824|Alt1|Gm9069|Leu2","deleted in lymphocytic leukemia, 2","ncRNA"]
[1591,"chr11",112780780,112781799,"+",0,"NA","promoter-TSS (NM_011448)","promoter-TSS (NM_011448)",-921,"NM_011448",20682,"Mm.286407","NM_011448","ENSMUSG00000000567","Sox9","2010306G03Rik|AV220920|mKIAA4243","SRY (sex determining region Y)-box 9","protein-coding"]
[8043,"chr8",92853897,92855834,"+",0,"NA","promoter-TSS (NM_173014)","promoter-TSS (NM_173014)",-485,"NM_173014",270084,"Mm.21463","NM_173014","ENSMUSG00000033192","Lpcat2","A330042H22|Aytl1|Aytl1a|lpafat1","lysophosphatidylcholine acyltransferase 2","protein-coding"]
[1677,"chr11",120548714,120550247,"+",0,"NA","TTS (NM_026814)","TTS (NM_026814)",247,"NM_001033231",192173,"Mm.262300","NM_001033231","ENSMUSG00000061111","Fam195b","-","family with sequence similarity 195, member B","protein-coding"]
[2174,"chr13",58157194,58158590,"+",0,"NA","intron (NM_198004, intron 1 of 4)","intron (NM_198004, intron 1 of 4)",243,"NM_198004",75731,"Mm.293919","NM_198004","ENSMUSG00000050002","Idnk","5133401N09Rik","idnK gluconokinase homolog (E. coli)","protein-coding"]
[1320,"chr11",78328118,78328872,"+",0,"NA","promoter-TSS (NM_201406)","promoter-TSS (NM_201406)",73,"NM_201406",276846,"Mm.295908","NM_201406","ENSMUSG00000041958","Pigs","BC058979|Gm393|Gm689","phosphatidylinositol glycan anchor biosynthesis, class S","protein-coding"]
[8417,"chr9",54950472,54951502,"+",0,"NA","promoter-TSS (NM_145229)","promoter-TSS (NM_145229)",-33,"NM_145229",246735,"Mm.473773","NM_145229","ENSMUSG00000044820","AY074887","Mcpr1","cDNA sequence AY074887","protein-coding"]
[7814,"chr8",31167988,31169367,"+",0,"NA","promoter-TSS (NM_026453)","promoter-TSS (NM_026453)",47,"NM_026453",67920,"Mm.289818","NM_026453","ENSMUSG00000031578","Mak16","2600016B03Rik|AI314911|Rbm13","MAK16 homolog (S. cerevisiae)","protein-coding"]
[8561,"chr9",86693441,86696433,"+",0,"NA","promoter-TSS (NR_045835)","promoter-TSS (NR_045835)",-505,"NR_045835",319556,"Mm.386894","NR_045835","ENSMUSG00000087466","A330041J22Rik","-","RIKEN cDNA A330041J22 gene","ncRNA"]
[1026,"chr11",22990139,22991605,"+",0,"NA","exon (NM_009837, exon 1 of 14)","exon (NM_009837, exon 1 of 14)",279,"NM_009837",12464,"Mm.296985","NM_009837","ENSMUSG00000007739","Cct4","2610204B21Rik|A45|C78323|Cctd","chaperonin containing Tcp1, subunit 4 (delta)","protein-coding"]
[5606,"chr4",86856382,86858081,"+",0,"NA","intron (NM_009096, intron 1 of 4)","CpG",136,"NM_009096",20104,"Mm.379007","NM_009096",null,"Rps6","S6R","ribosomal protein S6","protein-coding"]
[1390,"chr11",87986026,87987454,"+",0,"NA","promoter-TSS (NM_001168472)","promoter-TSS (NM_001168472)",-155,"NM_001168472",68097,"Mm.246436","NM_026556","ENSMUSG00000020483","Dynll2","1700064A15Rik|6720463E02Rik|C87222|DLC8|DLC8b|Dlc2","dynein light chain LC8-type 2","protein-coding"]
[8521,"chr9",72530756,72532977,"+",0,"NA","promoter-TSS (NR_045735)","promoter-TSS (NR_045735)",-8,"NR_045735",75115,"Mm.280755","NR_045735","ENSMUSG00000096986","4930509E16Rik","-","RIKEN cDNA 4930509E16 gene","ncRNA"]
[3544,"chr17",35896780,35898046,"+",0,"NA","promoter-TSS (NM_001033630)","promoter-TSS (NM_001033630)",-35,"NM_001033630",69662,"Mm.260159","NM_001033630","ENSMUSG00000050705","2310061I04Rik","-","RIKEN cDNA 2310061I04 gene","protein-coding"]
[1469,"chr11",98728890,98729371,"+",0,"NA","intron (NM_011869, intron 1 of 25)","intron (NM_011869, intron 1 of 25)",305,"NM_011869",23989,"Mm.246493","NM_011869","ENSMUSG00000017210","Med24","911GSE|AU040102|AW547152|D11Ertd307e|DRIP100|Gse2|Pparb2|Pparbp2|R75526|Thrap4|Trap100","mediator complex subunit 24","protein-coding"]
[4674,"chr2",117821754,117822269,"+",0,"NA","promoter-TSS (NR_040631)","promoter-TSS (NR_040631)",83,"NR_040631",73938,"Mm.399107","NR_040631","ENSMUSG00000086221","4930412B13Rik","-","RIKEN cDNA 4930412B13 gene","ncRNA"]
[1268,"chr11",73176291,73178988,"+",0,"NA","promoter-TSS (NM_001168470)","promoter-TSS (NM_001168470)",556,"NM_029564",76281,"Mm.371656","NM_029564","ENSMUSG00000040158","Tax1bp3","1300011C24Rik|TIP-1","Tax1 (human T cell leukemia virus type I) binding protein 3","protein-coding"]
[1977,"chr12",111813579,111814667,"+",0,"NA","promoter-TSS (NM_026752)","promoter-TSS (NM_026752)",-47,"NM_026752",68520,"Mm.390497","NM_026752","ENSMUSG00000021286","Zfyve21","1110013H04Rik|AW558780|C85416","zinc finger, FYVE domain containing 21","protein-coding"]
[2023,"chr13",17803243,17806111,"+",0,"NA","5' UTR (NM_001081058, exon 1 of 14)","5' UTR (NM_001081058, exon 1 of 14)",420,"NM_001081058",69562,"Mm.193924","NM_027118","ENSMUSG00000041297","Cdk13","2310015O17Rik|Cdc2l5","cyclin-dependent kinase 13","protein-coding"]
[4387,"chr2",25574179,25575851,"+",0,"NA","promoter-TSS (NM_029293)","promoter-TSS (NM_029293)",-144,"NM_029293",75454,"Mm.458079","NM_029293",null,"Phpt1","1700008C22Rik|Php14","phosphohistidine phosphatase 1","protein-coding"]
[8331,"chr9",36767056,36768838,"+",0,"NA","promoter-TSS (NM_008408)","promoter-TSS (NM_008408)",-369,"NM_008408",16430,"Mm.2863","NM_008408","ENSMUSG00000032116","Stt3a","AA408947|BB081708|Itm1","STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)","protein-coding"]
[3445,"chr17",29660267,29661601,"+",0,"NA","intron (NM_028791, intron 1 of 23)","CpG",339,"NM_028791",74157,"Mm.390979","NM_028791",null,"Cmtr1","1300018I05Rik|AI451264|Ftsjd2|MTr1","cap methyltransferase 1","protein-coding"]
[1669,"chr11",120150288,120152082,"+",0,"NA","5' UTR (NM_001164802, exon 1 of 11)","5' UTR (NM_001164802, exon 1 of 11)",166,"NM_001164799",72055,"Mm.253403","NM_024249","ENSMUSG00000061306","Slc38a10","1810073N04Rik","solute carrier family 38, member 10","protein-coding"]
[1825,"chr12",70227185,70227933,"+",0,"NA","promoter-TSS (NR_045174)","promoter-TSS (NR_045174)",124,"NM_133198",110095,"Mm.256926","NM_133198","ENSMUSG00000021069","Pygl","-","liver glycogen phosphorylase","protein-coding"]
[1285,"chr11",75486835,75487628,"+",0,"NA","intron (NM_138659, intron 1 of 41)","CpG",454,"NM_138659",192159,"Mm.3757","NM_138659","ENSMUSG00000020850","Prpf8","AU019467|D11Bwg0410e|DBF3/PRP8|Prp8|Sfprp8l","pre-mRNA processing factor 8","protein-coding"]
[6401,"chr5",121619061,121619535,"+",0,"NA","promoter-TSS (NM_178799)","promoter-TSS (NM_178799)",-360,"NM_178799",338350,"Mm.482918","NM_178799",null,"Acad12","9330129D05Rik","acyl-Coenzyme A dehydrogenase family, member 12","protein-coding"]
[7335,"chr7",47007078,47009326,"+",0,"NA","5' UTR (NM_175318, exon 1 of 6)","5' UTR (NM_175318, exon 1 of 6)",212,"NM_175318",101685,"Mm.155687","NM_175318","ENSMUSG00000049516","Spty2d1","5830435K17Rik|AI852426|P16H6","SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)","protein-coding"]
[3757,"chr18",7868324,7871205,"+",0,"NA","intron (NM_153085, intron 1 of 13)","CpG",567,"NM_153085",225131,"Mm.204524","NM_153085","ENSMUSG00000024283","Wac","1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4","WW domain containing adaptor with coiled-coil","protein-coding"]
[1959,"chr12",108792327,108795162,"+",0,"NA","exon (NM_009537, exon 1 of 5)","exon (NM_009537, exon 1 of 5)",433,"NM_009537",22632,"Mm.3868","NM_009537","ENSMUSG00000021264","Yy1","AW488674|NF-E1","YY1 transcription factor","protein-coding"]
[1242,"chr11",70323017,70323323,"+",0,"NA","promoter-TSS (NM_145684)","promoter-TSS (NM_145684)",-652,"NM_145684",11685,"Mm.274093","NM_145684","ENSMUSG00000018907","Alox12e","8-LOX|AW259591|Alox12-ps1|Alox12-ps2|Aloxe|e-LOX1","arachidonate lipoxygenase, epidermal","protein-coding"]
[1874,"chr12",80945052,80947393,"+",0,"NA","promoter-TSS (NR_045057)","promoter-TSS (NR_045057)",718,"NM_009159",20384,"Mm.43331","NM_009159","ENSMUSG00000021134","Srsf5","Sfrs5","serine/arginine-rich splicing factor 5","protein-coding"]
[3542,"chr17",35865132,35867543,"+",0,"NA","promoter-TSS (NM_175242)","promoter-TSS (NM_175242)",209,"NM_001146710",76448,"Mm.359982","NM_175242","ENSMUSG00000034595","Ppp1r18","2310014H01Rik|AA407849|AI450394","protein phosphatase 1, regulatory subunit 18","protein-coding"]
[6619,"chr5",151407005,151408340,"+",0,"NA","intron (NR_131166, intron 1 of 3)","intron (NR_131166, intron 1 of 3)",1168,"NR_131166",100042166,"Mm.443286","NR_131166",null,"Gm3704","-","predicted gene 3704","ncRNA"]
[519,"chr10",5805745,5806479,"+",0,"NA","promoter-TSS (NM_025995)","promoter-TSS (NM_025995)",-647,"NM_025995",67141,"Mm.197520","NM_025995","ENSMUSG00000019773","Fbxo5","2510044I10Rik|C85305|Emi1|Fbxo31","F-box protein 5","protein-coding"]
[5070,"chr3",51411663,51417429,"+",0,"NA","Intergenic","Intergenic",-1470,"NM_053089",74838,"Mm.275281","NM_053089","ENSMUSG00000063273","Naa15","5730450D16Rik|6330400I15|ASTBDN|Narg1|Tbdn-1|mNAT1","N(alpha)-acetyltransferase 15, NatA auxiliary subunit","protein-coding"]
[6383,"chr5",118244784,118246099,"+",0,"NA","promoter-TSS (NM_172998)","promoter-TSS (NM_172998)",214,"NM_001081236",76792,"Mm.103428","NM_001081236",null,"2410131K14Rik","-","RIKEN cDNA 2410131K14 gene","protein-coding"]
[4092,"chr19",8711907,8714139,"+",0,"NA","intron (NM_008577, intron 1 of 8)","intron (NM_008577, intron 1 of 8)",874,"NM_008577",17254,"Mm.4114","NM_008577","ENSMUSG00000010095","Slc3a2","4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE","solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2","protein-coding"]
[2451,"chr14",51006819,51006977,"+",0,"NA","promoter-TSS (NM_001162863)","promoter-TSS (NM_001162863)",-853,"NM_001162863",75019,"Mm.318775","NM_029145","ENSMUSG00000021872","Rnase10","4930474F22Rik|Rah1","ribonuclease, RNase A family, 10 (non-active)","protein-coding"]
[8621,"chr9",106365187,106374152,"+",0,"NA","intron (NM_153459, intron 1 of 2)","intron (NM_153459, intron 1 of 2)",1037,"NM_153459",235584,"Mm.275584","NM_153459","ENSMUSG00000053716","Dusp7","AU015694|Mkpx|Pyst2","dual specificity phosphatase 7","protein-coding"]
[7059,"chr7",5060506,5063252,"+",0,"NA","promoter-TSS (NM_133671)","promoter-TSS (NM_133671)",-264,"NM_133671",22185,"Mm.360389","NM_133671","ENSMUSG00000030435","U2af2","65kDa","U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2","protein-coding"]
[5466,"chr4",21879266,21880388,"+",0,"NA","intron (NM_172687, intron 1 of 6)","CpG",152,"NM_172687",230027,"Mm.5662","NM_172687","ENSMUSG00000028247","Coq3","4732433J24|C77934","coenzyme Q3 homolog, methyltransferase (yeast)","protein-coding"]
[3337,"chr17",23771222,23771519,"+",0,"NA","intron (NM_153791, intron 1 of 6)","CpG",221,"NM_153791",224613,"Mm.328835","NM_153791","ENSMUSG00000040097","Flywch1","E030034P13Rik|mKIAA1552","FLYWCH-type zinc finger 1","protein-coding"]
[1274,"chr11",74827910,74833111,"+",0,"NA","promoter-TSS (NM_010813)","promoter-TSS (NM_010813)",-414,"NM_010813",17428,"Mm.3759","NM_010813","ENSMUSG00000000282","Mnt","Rox|bHLHd3","max binding protein","protein-coding"]
[5119,"chr3",82357488,82357704,"+",0,"NA","promoter-TSS (NM_001081230)","promoter-TSS (NM_001081230)",-476,"NM_001081230",213582,"Mm.271269","NM_001081230","ENSMUSG00000033900","Map9","5033421J10Rik|5330427D05Rik|ASAP|Mtap9","microtubule-associated protein 9","protein-coding"]
[110,"chr1",57377691,57378311,"+",0,"NA","promoter-TSS (NR_037999)","promoter-TSS (NR_037999)",381,"NM_028546",73467,"Mm.263673","NM_028546","ENSMUSG00000038323","1700066M21Rik","AI428479","RIKEN cDNA 1700066M21 gene","protein-coding"]
[4861,"chr2",154891693,154893558,"+",0,"NA","intron (NM_026030, intron 1 of 8)","CpG",281,"NM_026030",67204,"Mm.377134","NM_026030","ENSMUSG00000074656","Eif2s2","2810026E11Rik|38kDa|AA408636|AA571381|AA986487|AW822225|D2Ertd303e|EIF2|EIF2B","eukaryotic translation initiation factor 2, subunit 2 (beta)","protein-coding"]
[8215,"chr8",123858871,123860078,"+",0,"NA","intron (NM_028536, intron 1 of 3)","CpG-14647",735,"NM_028536",73420,"Mm.157746","NM_028536","ENSMUSG00000031971","Ccsap","1700054N08Rik|AI853424","centriole, cilia and spindle associated protein","protein-coding"]
[8139,"chr8",110900978,110902420,"+",0,"NA","intron (NR_052009, intron 1 of 23)","intron (NR_052009, intron 1 of 23)",789,"NM_172283",234730,"Mm.102591","NM_172283","ENSMUSG00000033703","Fuk","1110046B12Rik|AI303278","fucokinase","protein-coding"]
[2210,"chr13",67729046,67729211,"+",0,"NA","promoter-TSS (NM_145622)","promoter-TSS (NM_145622)",45,"NM_145622",235907,"Mm.440123","NM_145622","ENSMUSG00000071281","Zfp65","KRAB5|Zfp71-rs1|pz114","zinc finger protein 65","protein-coding"]
[2658,"chr15",12116943,12119161,"+",0,"NA","intron (NM_011767, intron 1 of 19)","CpG",201,"NM_011767",22763,"Mm.273496","NM_011767","ENSMUSG00000022201","Zfr","C920030H05Rik","zinc finger RNA binding protein","protein-coding"]
[8778,"chrX",9660010,9662950,"+",0,"NA","intron (NM_025975, intron 1 of 4)","intron (NM_025975, intron 1 of 4)",1503,"NM_025975",67117,"Mm.29150","NM_025975","ENSMUSG00000031176","Dynlt3","2310075M16Rik|AU042796|Tcte1l","dynein light chain Tctex-type 3","protein-coding"]
[8112,"chr8",106510499,106511846,"+",0,"NA","intron (NM_001037809, intron 1 of 15)","intron (NM_001037809, intron 1 of 15)",320,"NM_001037809",12560,"Mm.4658","NM_007665","ENSMUSG00000061048","Cdh3","AI385538|Cadp|Cdhp|P-cadherin|Pcad","cadherin 3","protein-coding"]
[6309,"chr5",107986463,107988047,"+",0,"NA","promoter-TSS (NM_026062)","promoter-TSS (NM_026062)",-178,"NM_026062",67266,"Mm.277897","NM_026062","ENSMUSG00000029270","Fam69a","2900024C23Rik|AI315274","family with sequence similarity 69, member A","protein-coding"]
[6644,"chr6",17280752,17283199,"+",0,"NA","exon (NM_016900, exon 2 of 3)","exon (NM_016900, exon 2 of 3)",790,"NM_016900",12390,"Mm.396075","NM_016900","ENSMUSG00000000058","Cav2","AI447843","caveolin 2","protein-coding"]
[646,"chr10",59615834,59616663,"+",0,"NA","intron (NM_001033259, intron 1 of 7)","CpG",444,"NM_001033259",215999,"Mm.296470","NM_001033259","ENSMUSG00000009647","Mcu","2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64","mitochondrial calcium uniporter","protein-coding"]
[8530,"chr9",75070811,75072163,"+",0,"NA","5' UTR (NM_010864, exon 1 of 41)","5' UTR (NM_010864, exon 1 of 41)",281,"NM_010864",17918,"Mm.3645","NM_010864","ENSMUSG00000034593","Myo5a","9630007J19Rik|AI413174|AI661011|Dbv|MVa|Myo5|MyoVA|Sev-1|d|d-120J|flail|flr","myosin VA","protein-coding"]
[5322,"chr3",109340115,109341223,"+",0,"NA","promoter-TSS (NM_020505)","promoter-TSS (NM_020505)",-14,"NM_020505",57257,"Mm.282257","NM_020505","ENSMUSG00000033721","Vav3","A530094I06Rik|AA986410|Idd18.1","vav 3 oncogene","protein-coding"]
[8491,"chr9",65884581,65885605,"+",0,"NA","promoter-TSS (NM_001170907)","promoter-TSS (NM_001170907)",80,"NM_001170907",56404,"Mm.208379","NM_019797","ENSMUSG00000032386","Trip4","4930558E03Rik|ASC-1|Asc1|BB191711","thyroid hormone receptor interactor 4","protein-coding"]
[4005,"chr19",4436714,4442472,"+",0,"NA","promoter-TSS (NR_045989)","promoter-TSS (NR_045989)",34,"NR_045989",319314,"Mm.393810","NR_045989","ENSMUSG00000087132","A930001C03Rik","-","RIKEN cDNA A930001C03 gene","ncRNA"]
[8342,"chr9",41207632,41207967,"+",0,"NA","intron (NR_040392, intron 1 of 4)","intron (NR_040392, intron 1 of 4)",1644,"NR_040392",78500,"Mm.275715","NR_040392","ENSMUSG00000100837","1700063D05Rik","-","RIKEN cDNA 1700063D05 gene","ncRNA"]
[6407,"chr5",122263921,122264429,"+",0,"NA","exon (NM_001039153, exon 1 of 14)","exon (NM_001039153, exon 1 of 14)",285,"NR_104441",654470,"Mm.28804","NM_001039153",null,"Tctn1","G730031O11Rik|Tect1","tectonic family member 1","protein-coding"]
[4626,"chr2",94437011,94438100,"+",0,"NA","intron (NM_001305258, intron 1 of 13)","CpG",631,"NM_007466",11800,"Mm.181824","NM_007466","ENSMUSG00000027193","Api5","AAC-11|AI196452|API-5","apoptosis inhibitor 5","protein-coding"]
[8431,"chr9",57075405,57075774,"+",0,"NA","promoter-TSS (NM_011378)","promoter-TSS (NM_011378)",-787,"NM_001110350",20466,"Mm.15755","NM_011378","ENSMUSG00000042557","Sin3a","AW553200|Sin3|mKIAA4126|mSin3A","transcriptional regulator, SIN3A (yeast)","protein-coding"]
[7993,"chr8",84249128,84250378,"+",0,"NA","promoter-TSS (NM_001007571)","promoter-TSS (NM_001007571)",8,"NM_001007571",101966,"Mm.200723","NM_001007571","ENSMUSG00000019362","D8Ertd738e","AA589584","DNA segment, Chr 8, ERATO Doi 738, expressed","protein-coding"]
[6151,"chr5",34949617,34949944,"+",0,"NA","intron (NM_173402, intron 1 of 16)","CpG",332,"NM_173402",71729,"Mm.196208","NM_173402","ENSMUSG00000029101","Rgs12","1200016K18Rik|4632412M04Rik|AI481290|E130309H11","regulator of G-protein signaling 12","protein-coding"]
[5885,"chr4",135271527,135273609,"+",0,"NA","exon (NM_013885, exon 1 of 6)","exon (NM_013885, exon 1 of 6)",192,"NM_013885",29876,"Mm.257765","NM_013885","ENSMUSG00000037242","Clic4","D0Jmb3|TU-74|mc3s5|mtCLIC","chloride intracellular channel 4 (mitochondrial)","protein-coding"]
[4351,"chr2",19553595,19554340,"+",0,"NA","promoter-TSS (NM_027600)","promoter-TSS (NM_027600)",-57,"NM_027600",70909,"Mm.158488","NM_027600","ENSMUSG00000026734","4921504E06Rik","4921522E24Rik","RIKEN cDNA 4921504E06 gene","protein-coding"]
[4166,"chr19",29100663,29102016,"+",0,"NA","promoter-TSS (NM_021525)","promoter-TSS (NM_021525)",-36,"NM_021525",59028,"Mm.28630","NM_021525","ENSMUSG00000024785","Rcl1","2310040A02Rik|AI789745|C76567|RPCL1|Rnac","RNA terminal phosphate cyclase-like 1","protein-coding"]
[33,"chr1",24677816,24680072,"+",0,"NA","promoter-TSS (NM_001310483)","promoter-TSS (NM_001310483)",26,"NM_001310483",68421,"Mm.336563","NM_026719","ENSMUSG00000073725","Lmbrd1","0910001K20Rik|AV347960","LMBR1 domain containing 1","protein-coding"]
[5654,"chr4",107802572,107803308,"+",0,"NA","intron (NR_033496, intron 1 of 20)","CpG",681,"NM_001080926",16975,"Mm.442134","NM_053073","ENSMUSG00000028613","Lrp8","4932703M08Rik|AA921429|AI848122|ApoER2|Lr8b","low density lipoprotein receptor-related protein 8, apolipoprotein e receptor","protein-coding"]
[6990,"chr6",134641046,134642772,"+",0,"NA","intron (NM_026371, intron 1 of 3)","intron (NM_026371, intron 1 of 3)",969,"NM_026371",67774,"Mm.41892","NM_026371","ENSMUSG00000042992","Borcs5","5830457J20Rik|AW124643|Loh12cr1","BLOC-1 related complex subunit 5","protein-coding"]
[6235,"chr5",75046176,75046990,"+",0,"NA","Intergenic","Intergenic",-1942,"NM_028850",74277,"Mm.239814","NM_028850",null,"Chic2","1700081B18Rik|4930502K01Rik|BTL","cysteine-rich hydrophobic domain 2","protein-coding"]
[5619,"chr4",96552918,96554738,"+",0,"NA","promoter-TSS (NM_010008)","promoter-TSS (NM_010008)",-177,"NM_010008",13110,"Mm.98200","NM_010008","ENSMUSG00000052914","Cyp2j6","-","cytochrome P450, family 2, subfamily j, polypeptide 6","protein-coding"]
[4577,"chr2",80315062,80316003,"+",0,"NA","promoter-TSS (NM_024181)","promoter-TSS (NM_024181)",66,"NM_024181",66861,"Mm.21762","NM_024181","ENSMUSG00000027006","Dnajc10","1200006L06Rik|D2Ertd706e|ERdj5|JPDI","DnaJ (Hsp40) homolog, subfamily C, member 10","protein-coding"]
[2013,"chr13",12257781,12258038,"+",0,"NA","5' UTR (NM_001081128, exon 1 of 33)","5' UTR (NM_001081128, exon 1 of 33)",204,"NM_001081128",238505,"Mm.40335","NM_001081128","ENSMUSG00000021311","Mtr","AI894170|D830038K18Rik|MS","5-methyltetrahydrofolate-homocysteine methyltransferase","protein-coding"]
[7675,"chr7",140115813,140117175,"+",0,"NA","promoter-TSS (NM_053119)","promoter-TSS (NM_053119)",-71,"NM_053119",93747,"Mm.24452","NM_053119","ENSMUSG00000025465","Echs1","C80529","enoyl Coenzyme A hydratase, short chain, 1, mitochondrial","protein-coding"]
[264,"chr1",107588300,107595529,"+",0,"NA","intron (NM_011459, intron 1 of 6)","RLTR28|LTR|ERVL",1908,"NM_001159748",20725,"Mm.83909","NM_011459","ENSMUSG00000026315","Serpinb8","CAP-2|CAP2|NK10|Spi8|ovalbumin","serine (or cysteine) peptidase inhibitor, clade B, member 8","protein-coding"]
[806,"chr10",85184005,85185750,"+",0,"NA","5' UTR (NM_007771, exon 1 of 13)","5' UTR (NM_007771, exon 1 of 13)",177,"NM_007771",12952,"Mm.26237","NM_007771","ENSMUSG00000020038","Cry1","AU020726|AU021000|Phll1","cryptochrome 1 (photolyase-like)","protein-coding"]
[4960,"chr2",172439825,172441281,"+",0,"NA","promoter-TSS (NM_025542)","promoter-TSS (NM_025542)",-25,"NM_025542",66404,"Mm.25157","NM_025542","ENSMUSG00000027502","Rtfdc1","1700067C04Rik|2410001C21Rik|5730427M17Rik|AA589417","replication termination factor 2 domain containing 1","protein-coding"]
[1885,"chr12",83631510,83633116,"+",0,"NA","promoter-TSS (NM_027349)","promoter-TSS (NM_027349)",79,"NM_027349",67039,"Mm.46005","NM_027349","ENSMUSG00000010608","Rbm25","2600011C06Rik|2610015J01Rik|A130095G20Rik|AI159652|AL023075|AU043498|RNPC7","RNA binding motif protein 25","protein-coding"]
[4899,"chr2",158512854,158513160,"+",0,"NA","intron (NM_001145015, intron 1 of 14)","intron (NM_001145015, intron 1 of 14)",211,"NM_001145015",545481,"Mm.125371","NM_001145015","ENSMUSG00000074625","Arhgap40","C20orf95|Gm14203|OTTMUSG00000015933","Rho GTPase activating protein 40","protein-coding"]
[2905,"chr15",94543035,94544210,"+",0,"NA","promoter-TSS (NM_029926)","promoter-TSS (NM_029926)",-38,"NM_029926",266632,"Mm.422858","NM_029926","ENSMUSG00000059883","Irak4","8430405M07Rik|9330209D03Rik|IRAK-4|NY-REN-64","interleukin-1 receptor-associated kinase 4","protein-coding"]
[5612,"chr4",94556221,94556709,"+",0,"NA","exon (NM_026368, exon 1 of 6)","exon (NM_026368, exon 1 of 6)",331,"NM_026368",67770,"Mm.35170","NM_026368","ENSMUSG00000028578","Caap1","5830433M19Rik|AI536248|CAAP","caspase activity and apoptosis inhibitor 1","protein-coding"]
[7659,"chr7",132859271,132860002,"+",0,"NA","intron (NM_198017, intron 1 of 8)","CpG",411,"NM_198017",109359,"Mm.274824","NM_198017","ENSMUSG00000030965","Fam175b","AA589499|AI853413|Abro1|C430003P19Rik","family with sequence similarity 175, member B","protein-coding"]
[6519,"chr5",137683770,137684629,"+",0,"NA","intron (NM_001303271, intron 1 of 12)","CpG",554,"NM_001303271",231801,"Mm.260869","NM_145566","ENSMUSG00000029722","Agfg2","A630095P14Rik|Hrbl|RAB-R|RABR","ArfGAP with FG repeats 2","protein-coding"]
[556,"chr10",19591120,19595412,"+",0,"NA","intron (NM_010511, intron 1 of 6)","intron (NM_010511, intron 1 of 6)",1308,"NM_010511",15979,"Mm.549","NM_010511","ENSMUSG00000020009","Ifngr1","CD119|IFN-gammaR|Ifgr|Ifngr|Nktar","interferon gamma receptor 1","protein-coding"]
[717,"chr10",78241819,78245682,"+",0,"NA","intron (NM_001081055, intron 1 of 22)","intron (NM_001081055, intron 1 of 22)",892,"NM_001081055",216131,"Mm.27539","NM_001081055","ENSMUSG00000000374","Trappc10","B230307C21Rik|Gm870|Tmem1","trafficking protein particle complex 10","protein-coding"]
[7882,"chr8",68276012,68277415,"+",0,"NA","5' UTR (NM_028182, exon 1 of 9)","5' UTR (NM_028182, exon 1 of 9)",185,"NM_028182",72281,"Mm.40974","NM_028182","ENSMUSG00000053886","Sh2d4a","2210402M20Rik|SH2A","SH2 domain containing 4A","protein-coding"]
[2817,"chr15",79107377,79111086,"+",0,"NA","5' UTR (NM_177461, exon 1 of 16)","5' UTR (NM_177461, exon 1 of 16)",248,"NM_177461",27008,"Mm.196480","NM_177461","ENSMUSG00000033039","Micall1","AI448246|D15Mit260|D15N2e|EST573322|EST820961|MIRab13|mKIAA1668","microtubule associated monooxygenase, calponin and LIM domain containing -like 1","protein-coding"]
[6111,"chr5",30949507,30950398,"+",0,"NA","promoter-TSS (NM_021304)","promoter-TSS (NM_021304)",-114,"NR_003522",57742,"Mm.389615","NM_021304","ENSMUSG00000006638","Abhd1","LABH-1|LABH1","abhydrolase domain containing 1","protein-coding"]
[7838,"chr8",41133114,41135392,"+",0,"NA","promoter-TSS (NM_001005863)","promoter-TSS (NM_001005863)",-527,"NM_001005863",102103,"Mm.149438","NM_001005863","ENSMUSG00000045636","Mtus1","AI481402|ATBP135|Atip1|B430010I23Rik|B430305I03Rik|C85752|Cctsg1-440|MD44|MTSG1|mKIAA1288","mitochondrial tumor suppressor 1","protein-coding"]
[7250,"chr7",34651516,34655721,"+",0,"NA","promoter-TSS (NM_146188)","promoter-TSS (NM_146188)",-777,"NM_146188",233107,"Mm.486198","NM_146188","ENSMUSG00000030499","Kctd15","BC031749","potassium channel tetramerisation domain containing 15","protein-coding"]
[5436,"chr4",10874178,10875398,"+",0,"NA","intron (NM_026005, intron 1 of 5)","CpG",290,"NM_026005",67157,"Mm.440552","NM_026005","ENSMUSG00000059482","2610301B20Rik","AI428449","RIKEN cDNA 2610301B20 gene","protein-coding"]
[8299,"chr9",21798106,21798409,"+",0,"NA","intron (NM_145611, intron 1 of 11)","intron (NM_145611, intron 1 of 11)",289,"NM_145611",235041,"Mm.257371","NM_145611","ENSMUSG00000032194","Kank2","AI504612|Ankrd25|BC010245","KN motif and ankyrin repeat domains 2","protein-coding"]
[2249,"chr13",86046134,86046773,"+",0,"NA","intron (NM_007749, intron 1 of 2)","CpG",342,"NM_007749",12867,"Mm.378898","NM_007749",null,"Cox7c","COXVIIc|Cox7c1","cytochrome c oxidase subunit VIIc","protein-coding"]
[3353,"chr17",24442185,24444081,"+",0,"NA","promoter-TSS (NM_025718)","promoter-TSS (NM_025718)",-32,"NM_025718",66705,"Mm.29017","NM_025718",null,"Dnase1l2","4733401H14Rik","deoxyribonuclease 1-like 2","protein-coding"]
[5678,"chr4",111973774,111975519,"+",0,"NA","intron (NM_177818, intron 1 of 3)","Lx3B|LINE|L1",1719,"NM_001142775",328505,"Mm.226771","NM_177818","ENSMUSG00000049214","Skint7","C130057D23Rik","selection and upkeep of intraepithelial T cells 7","protein-coding"]
[1605,"chr11",115403494,115404266,"+",0,"NA","intron (NM_026729, intron 1 of 5)","CpG",114,"NM_026729",68572,"Mm.271062","NM_026729","ENSMUSG00000018858","Ict1","1110001A02Rik|1110002E03Rik|MRP-L58","immature colon carcinoma transcript 1","protein-coding"]
[8957,"chrX",153723183,153723989,"+",0,"NA","promoter-TSS (NM_027327)","promoter-TSS (NM_027327)",32,"NM_027327",70123,"Mm.146408","NM_027327",null,"2210013O21Rik","AI181827|Thp5","RIKEN cDNA 2210013O21 gene","protein-coding"]
[6892,"chr6",113305847,113306269,"+",0,"NA","TTS (NM_170673)","TTS (NM_170673)",-1079,"NM_030178",78783,"Mm.356059","NM_030178","ENSMUSG00000001632","Brpf1","4833438B11Rik|4930540D11Rik|Brpf2","bromodomain and PHD finger containing, 1","protein-coding"]
[2431,"chr14",46820597,46822176,"+",0,"NA","intron (NM_022023, intron 1 of 6)","L2|LINE|L2",856,"NM_022023",63985,"Mm.87312","NM_022023","ENSMUSG00000062014","Gmfb","3110001H22Rik|3110001O16Rik|AI851627|C79176|D14Ertd630e","glia maturation factor, beta","protein-coding"]
[6373,"chr5",116024029,116024869,"+",0,"NA","promoter-TSS (NM_031869)","promoter-TSS (NM_031869)",-21,"NM_031869",19079,"Mm.458152","NM_031869","ENSMUSG00000029513","Prkab1","1300015D22Rik|AU021155|E430008F22","protein kinase, AMP-activated, beta 1 non-catalytic subunit","protein-coding"]
[6299,"chr5",105414954,105416511,"+",0,"NA","promoter-TSS (NM_001033550)","promoter-TSS (NM_001033550)",-43,"NM_001033550",433926,"Mm.439781","NM_001033550",null,"Lrrc8b","R75581|Ta-lrrp|mKIAA0231","leucine rich repeat containing 8 family, member B","protein-coding"]
[1945,"chr12",103388768,103389095,"+",0,"NA","intron (NM_026580, intron 1 of 5)","CpG",249,"NM_001177841",68149,"Mm.127378","NM_026580","ENSMUSG00000021203","Otub2","2010015L18Rik|4930586I02Rik|AI413508|AW557219|OTB2|OTU2","OTU domain, ubiquitin aldehyde binding 2","protein-coding"]
[969,"chr11",5097589,5101650,"+",0,"NA","promoter-TSS (NM_001290493)","promoter-TSS (NM_001290493)",-129,"NR_110961",279766,"Mm.260866","NM_177370","ENSMUSG00000034175","Rhbdd3","Ptag","rhomboid domain containing 3","protein-coding"]
[4207,"chr19",40588884,40590067,"+",0,"NA","Intergenic","Intergenic",-1012,"NM_153554",56454,"Mm.233117","NM_019698","ENSMUSG00000025007","Aldh18a1","2810433K04Rik|AI429789|Pycs","aldehyde dehydrogenase 18 family, member A1","protein-coding"]
[4089,"chr19",7493101,7495719,"+",0,"NA","promoter-TSS (NM_146091)","promoter-TSS (NM_146091)",-28,"NM_146091",109168,"Mm.264016","NM_146091","ENSMUSG00000024759","Atl3","4633402C03Rik|5730596K20Rik|AI465397|AW228836","atlastin GTPase 3","protein-coding"]
[1501,"chr11",101008792,101010325,"+",0,"NA","5' UTR (NM_016920, exon 1 of 22)","5' UTR (NM_016920, exon 1 of 22)",106,"NM_001243051",11975,"Mm.340818","NM_016920","ENSMUSG00000019302","Atp6v0a1","AA959968|ATP6a1|Atp6n1|Atp6n1a|Atpv0a1|Vpp-1|Vpp1","ATPase, H+ transporting, lysosomal V0 subunit A1","protein-coding"]
[4808,"chr2",144600063,144600290,"+",0,"NA","intron (NM_025314, intron 1 of 5)","CpG",223,"NM_025314",66044,"Mm.28109","NM_025314","ENSMUSG00000027430","Dtd1","0610006H08Rik|DUE-B|Hars2","D-tyrosyl-tRNA deacylase 1","protein-coding"]
[549,"chr10",18055253,18056683,"+",0,"NA","promoter-TSS (NM_001111065)","promoter-TSS (NM_001111065)",28,"NM_001111065",19707,"Mm.4479","NM_009048","ENSMUSG00000019854","Reps1","BB161292","RalBP1 associated Eps domain containing protein","protein-coding"]
[8002,"chr8",84839958,84841324,"+",0,"NA","promoter-TSS (NM_001297607)","promoter-TSS (NM_001297607)",24,"NM_001297607",19358,"Mm.255539","NM_009010","ENSMUSG00000003813","Rad23a","2310040P19Rik|AL024030|HR23A|mHR23A","RAD23a homolog (S. cerevisiae)","protein-coding"]
[6127,"chr5",32457800,32461488,"+",0,"NA","intron (NM_172707, intron 1 of 7)","CpG",674,"NM_172707",19046,"Mm.241931","NM_172707",null,"Ppp1cb","1200010B19","protein phosphatase 1, catalytic subunit, beta isoform","protein-coding"]
[8532,"chr9",75440438,75442107,"+",0,"NA","promoter-TSS (NM_001039522)","promoter-TSS (NM_001039522)",-252,"NM_001039522",235497,"Mm.41508","NM_001006122","ENSMUSG00000042487","Leo1","Gm185","Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)","protein-coding"]
[7018,"chr6",146499772,146502489,"+",0,"NA","intron (NM_019923, intron 1 of 56)","intron (NM_019923, intron 1 of 56)",1093,"NM_010586",16439,"Mm.7800","NM_010586","ENSMUSG00000030287","Itpr2","AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2","inositol 1,4,5-triphosphate receptor 2","protein-coding"]
[3930,"chr18",67640587,67642029,"+",0,"NA","promoter-TSS (NM_134138)","promoter-TSS (NM_134138)",28,"NM_001081073",225659,"Mm.111928","NM_001081073","ENSMUSG00000073542","Cep76","6230425F05Rik|9630013E05","centrosomal protein 76","protein-coding"]
[8828,"chrX",50634719,50636020,"+",0,"NA","promoter-TSS (NR_015505)","promoter-TSS (NR_015505)",-48,"NR_015505",103012,"Mm.482523","NR_015505","ENSMUSG00000085396","Firre","5830467J12Rik|6720401G13Rik|AW048145","functional intergenic repeating RNA element","ncRNA"]
[946,"chr11",3202359,3203238,"+",0,"NA","promoter-TSS (NM_001166549)","promoter-TSS (NM_001166549)",-197,"NM_001166547",74203,"Mm.255649","NM_023743","ENSMUSG00000020454","Eif4enif1","2610509L04Rik|A930019J01Rik|AA410001|AU021239|Clast4|D11Ertd166e","eukaryotic translation initiation factor 4E nuclear import factor 1","protein-coding"]
[7230,"chr7",30562417,30564131,"+",0,"NA","promoter-TSS (NM_025498)","promoter-TSS (NM_025498)",-66,"NM_170760",233073,"Mm.34790","NM_170760","ENSMUSG00000078765","U2af1l4","AA407033|AF419339|AI451269|AW553050|U2af26","U2 small nuclear RNA auxiliary factor 1-like 4","protein-coding"]
[1361,"chr11",84818271,84819490,"+",0,"NA","exon (NM_145433, exon 1 of 5)","exon (NM_145433, exon 1 of 5)",635,"NM_145433",217038,"Mm.280825","NM_145433","ENSMUSG00000018405","Mrm1","A530065E19Rik|ENSMUSG00000054212","mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)","protein-coding"]
[7020,"chr6",146724476,146725920,"+",0,"NA","intron (NM_172734, intron 1 of 13)","CpG",268,"NM_172734",232533,"Mm.322121","NM_172734","ENSMUSG00000001630","Stk38l","4930473A22Rik|B230328I19|Ndr2|Ndr54","serine/threonine kinase 38 like","protein-coding"]
[6737,"chr6",50455308,50458352,"+",0,"NA","promoter-TSS (NM_001163645)","promoter-TSS (NM_001163645)",-660,"NM_001163645",71720,"Mm.44153","NM_027881","ENSMUSG00000029822","Osbpl3","1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3","oxysterol binding protein-like 3","protein-coding"]
[3864,"chr18",42274888,42276202,"+",0,"NA","promoter-TSS (NR_033452)","promoter-TSS (NR_033452)",192,"NM_172626",225432,"Mm.329400","NM_172626","ENSMUSG00000024491","Rbm27","A730010I06|AI043120|Psc1|mKIAA1311","RNA binding motif protein 27","protein-coding"]
[5079,"chr3",54734477,54735940,"+",0,"NA","promoter-TSS (NM_025442)","promoter-TSS (NM_025442)",156,"NM_027148",69639,"Mm.29253","NM_027148","ENSMUSG00000027752","Exosc8","2310032N20Rik|CIP3|mKIAA4013","exosome component 8","protein-coding"]
[3773,"chr18",12333518,12334432,"+",0,"NA","promoter-TSS (NM_010680)","promoter-TSS (NM_010680)",-49,"NM_010680",16774,"Mm.42012","NM_010680","ENSMUSG00000024421","Lama3","Lama3B|[a]3B","laminin, alpha 3","protein-coding"]
[5025,"chr3",20057251,20059023,"+",0,"NA","promoter-TSS (NR_105047)","promoter-TSS (NR_105047)",-154,"NR_105047",20585,"Mm.209650","NM_009210","ENSMUSG00000002428","Hltf","AF010600|BC057116|P113|Smarca3|Snf2l3","helicase-like transcription factor","protein-coding"]
[1397,"chr11",88998839,89001597,"+",0,"NA","intron (NM_009546, intron 1 of 8)","intron (NM_009546, intron 1 of 8)",815,"NM_009546",217069,"Mm.248445","NM_009546","ENSMUSG00000000275","Trim25","AA960166|AL022677|EFP|Zfp147","tripartite motif-containing 25","protein-coding"]
[3678,"chr17",66123589,66124204,"+",0,"NA","intron (NM_001003919, intron 1 of 26)","intron (NM_001003919, intron 1 of 26)",376,"NM_001003919",320209,"Mm.259605","NM_001003919","ENSMUSG00000035842","Ddx11","4732462I11Rik|CHL1|CHLR1|KRG2|essa15a","DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11","protein-coding"]
[8539,"chr9",78107236,78110148,"+",0,"NA","promoter-TSS (NM_023605)","promoter-TSS (NM_023605)",-36,"NM_023605",71538,"Mm.28584","NM_023605","ENSMUSG00000001366","Fbxo9","9030401P18Rik|AA986398","f-box protein 9","protein-coding"]
[6051,"chr5",4103662,4105897,"+",0,"NA","promoter-TSS (NM_020010)","promoter-TSS (NM_020010)",-82,"NM_020010",13121,"Mm.140158","NM_020010","ENSMUSG00000001467","Cyp51","AI426508|CYPLI|Cyp51a1|Ldm|P450-14DM|P450LI","cytochrome P450, family 51","protein-coding"]
[583,"chr10",31607096,31610206,"+",0,"NA","exon (NM_001146349, exon 1 of 6)","exon (NM_001146349, exon 1 of 6)",1074,"NM_001146349",268291,"Mm.295212","NM_001146349",null,"Rnf217","AU016819|Ibrdc1","ring finger protein 217","protein-coding"]
[7852,"chr8",46739169,46742067,"+",0,"NA","intron (NM_008391, intron 1 of 8)","CpG",873,"NM_008391",16363,"Mm.1149","NM_008391","ENSMUSG00000031627","Irf2","9830146E22Rik|AI646973|Irf-2","interferon regulatory factor 2","protein-coding"]
[5063,"chr3",41563236,41566187,"+",0,"NA","promoter-TSS (NM_001130186)","promoter-TSS (NM_001130186)",-169,"NM_001130186",269424,"Mm.286285","NM_172303","ENSMUSG00000025764","Jade1","AU041499|D530048A03Rik|Phf17|mKIAA1807","jade family PHD finger 1","protein-coding"]
[8602,"chr9",102834545,102835631,"+",0,"NA","exon (NM_013649, exon 1 of 15)","exon (NM_013649, exon 1 of 15)",168,"NM_001042607",20187,"Mm.335391","NM_013649","ENSMUSG00000032547","Ryk","AW536699|ERK-3|Vik","receptor-like tyrosine kinase","protein-coding"]
[7535,"chr7",113513048,113514620,"+",0,"NA","promoter-TSS (NM_027379)","promoter-TSS (NM_027379)",0,"NM_001285831",67420,"Mm.206919","NM_026143","ENSMUSG00000030759","Far1","2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2","fatty acyl CoA reductase 1","protein-coding"]
[8946,"chrX",151016824,151017212,"+",0,"NA","intron (NM_001168600, intron 1 of 15)","intron (NM_001168600, intron 1 of 15)",275,"NM_001168600",237107,"Mm.45987","NM_198110","ENSMUSG00000025266","Gnl3l","BC020354","guanine nucleotide binding protein-like 3 (nucleolar)-like","protein-coding"]
[8817,"chrX",38600707,38601166,"+",0,"NA","intron (NM_026902, intron 1 of 5)","intron (NM_026902, intron 1 of 5)",278,"NM_026902",68995,"Mm.262453","NM_026902","ENSMUSG00000000355","Mcts1","1500019M23Rik|MCT-1","malignant T cell amplified sequence 1","protein-coding"]
[591,"chr10",36973992,36975379,"+",0,"NA","5' UTR (NM_008229, exon 1 of 14)","5' UTR (NM_008229, exon 1 of 14)",141,"NM_008229",15182,"Mm.19806","NM_008229","ENSMUSG00000019777","Hdac2","D10Wsu179e|YAF1|Yy1bp|mRPD3","histone deacetylase 2","protein-coding"]
[8808,"chrX",36863871,36864525,"+",0,"NA","promoter-TSS (NM_029951)","promoter-TSS (NM_029951)",48,"NM_029951",77644,"Mm.290704","NM_029951","ENSMUSG00000006423","C330007P06Rik","-","RIKEN cDNA C330007P06 gene","protein-coding"]
[2304,"chr13",106946350,106947578,"+",0,"NA","promoter-TSS (NM_025447)","promoter-TSS (NM_025447)",-165,"NM_025447",66254,"Mm.9563","NM_025447","ENSMUSG00000021692","Dimt1","1500031M22Rik|AV111347|Dimt1l","DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)","protein-coding"]
[6571,"chr5",143314822,143315349,"+",0,"NA","exon (NM_172726, exon 1 of 6)","exon (NM_172726, exon 1 of 6)",275,"NM_172726",231868,"Mm.440105","NM_172726","ENSMUSG00000039244","E130309D02Rik","A630028N22","RIKEN cDNA E130309D02 gene","protein-coding"]
[3846,"chr18",36734158,36735680,"+",0,"NA","promoter-TSS (NM_028036)","promoter-TSS (NM_028036)",-151,"NM_028036",71983,"Mm.135188","NM_028036","ENSMUSG00000006850","Tmco6","2410015B03Rik","transmembrane and coiled-coil domains 6","protein-coding"]
[2804,"chr15",77928083,77929544,"+",0,"NA","intron (NM_019913, intron 1 of 3)","intron (NM_019913, intron 1 of 3)",181,"NM_019913",56551,"Mm.291917","NM_019913","ENSMUSG00000005354","Txn2","2510006J11Rik|AI788873|Trx2","thioredoxin 2","protein-coding"]
[2341,"chr14",13960471,13962011,"+",0,"NA","promoter-TSS (NM_025435)","promoter-TSS (NM_025435)",72,"NM_001285780",66231,"Mm.295875","NM_025435","ENSMUSG00000053453","Thoc7","Nif3l1bp1","THO complex 7 homolog (Drosophila)","protein-coding"]
[4078,"chr19",6995759,6996615,"+",0,"NA","promoter-TSS (NM_153597)","promoter-TSS (NM_153597)",56,"NR_027351",107328,"Mm.391161","NM_153597","ENSMUSG00000047656","Trpt1","AU079016|AW045591|Tpt1|Tpt1h","tRNA phosphotransferase 1","protein-coding"]
[5123,"chr3",84154783,84156661,"+",0,"NA","promoter-TSS (NM_029797)","promoter-TSS (NM_029797)",64,"NM_029797",76915,"Mm.274829","NM_029797","ENSMUSG00000033752","Mnd1","2610034E18Rik|AI591601|Gaj","meiotic nuclear divisions 1 homolog (S. cerevisiae)","protein-coding"]
[6467,"chr5",130023905,130025198,"+",0,"NA","promoter-TSS (NM_133768)","promoter-TSS (NM_133768)",-220,"NM_133768",109900,"Mm.23869","NM_133768","ENSMUSG00000025533","Asl","2510006M18Rik","argininosuccinate lyase","protein-coding"]
[4990,"chr2",181186712,181190107,"+",0,"NA","TTS (NM_025598)","TTS (NM_025598)",1066,"NM_025598",66496,"Mm.213943","NM_025598","ENSMUSG00000016344","Ppdpf","0610012G23Rik|2610317A05Rik|2700038C09Rik|3110053G12Rik","pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene","protein-coding"]
[1920,"chr12",91848540,91849134,"+",0,"NA","intron (NM_011344, intron 1 of 20)","CpG",320,"NM_001039089",20338,"Mm.250605","NM_011344","ENSMUSG00000020964","Sel1l","AW493766|Sel1h|mKIAA4137","sel-1 suppressor of lin-12-like (C. elegans)","protein-coding"]
[3827,"chr18",34758831,34760365,"+",0,"NA","intron (NM_175104, intron 1 of 4)","CpG",692,"NM_175104",66306,"Mm.29424","NM_175104","ENSMUSG00000034300","Fam53c","2810012G03Rik|Gm21179","family with sequence similarity 53, member C","protein-coding"]
[5157,"chr3",88685045,88687007,"+",0,"NA","intron (NM_028814, intron 1 of 13)","CpG",232,"NM_028814",74200,"Mm.251800","NM_028814","ENSMUSG00000028060","2810403A07Rik","A430106P18Rik|AI256352|AI451678|Blom7|Kiaa0907","RIKEN cDNA 2810403A07 gene","protein-coding"]
[4589,"chr2",84826713,84827621,"+",0,"NA","intron (NM_013899, intron 1 of 2)","intron (NM_013899, intron 1 of 2)",146,"NM_013899",30059,"Mm.21826","NM_013899","ENSMUSG00000027076","Timm10","Tim13|Timm13a","translocase of inner mitochondrial membrane 10","protein-coding"]
[2992,"chr16",4679244,4679606,"+",0,"NA","intron (NM_030205, intron 1 of 27)","intron (NM_030205, intron 1 of 27)",295,"NM_030205",78885,"Mm.325512","NM_030205","ENSMUSG00000039637","Coro7","0610011B16Rik|AW048373|AW556392","coronin 7","protein-coding"]
[4942,"chr2",167014736,167016461,"+",0,"NA","intron (NM_153065, intron 1 of 20)","intron (NM_153065, intron 1 of 20)",285,"NM_153065",228889,"Mm.295031","NM_153065","ENSMUSG00000017999","Ddx27","C86129","DEAD (Asp-Glu-Ala-Asp) box polypeptide 27","protein-coding"]
[2639,"chr15",5183906,5186384,"+",0,"NA","promoter-TSS (NM_026213)","promoter-TSS (NM_026213)",-415,"NM_026213",67515,"Mm.254979","NM_026213","ENSMUSG00000022151","Ttc33","2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf","tetratricopeptide repeat domain 33","protein-coding"]
[4409,"chr2",27675936,27676825,"+",0,"NA","promoter-TSS (NM_011305)","promoter-TSS (NM_011305)",-821,"NM_011305",20181,"Mm.24624","NM_011305","ENSMUSG00000015846","Rxra","9530071D11Rik|Nr2b1|RXRalpha1","retinoid X receptor alpha","protein-coding"]
[1625,"chr11",116130344,116133110,"+",0,"NA","promoter-TSS (NM_178802)","promoter-TSS (NM_178802)",-599,"NM_178802",338364,"Mm.439976","NM_178802","ENSMUSG00000054517","Trim65","4732463G12Rik","tripartite motif-containing 65","protein-coding"]
[163,"chr1",74232284,74240700,"+",0,"NA","promoter-TSS (NM_029711)","promoter-TSS (NM_029711)",-58,"NM_029711",76709,"Mm.337038","NM_029711","ENSMUSG00000006304","Arpc2","2210023N03Rik|34kDa|p34-Arc","actin related protein 2/3 complex, subunit 2","protein-coding"]
[4070,"chr19",6840018,6841768,"+",0,"NA","promoter-TSS (NM_019924)","promoter-TSS (NM_019924)",-266,"NM_019924",56613,"Mm.20914","NM_019924","ENSMUSG00000024952","Rps6ka4","1110069D02Rik|90kDa|AI848992|Msk2|mMSK2","ribosomal protein S6 kinase, polypeptide 4","protein-coding"]
[3898,"chr18",60559893,60561156,"+",0,"NA","promoter-TSS (NM_025776)","promoter-TSS (NM_025776)",-262,"NM_025776",66810,"Mm.275106","NM_025776","ENSMUSG00000024604","Rbm22","8430430L24Rik","RNA binding motif protein 22","protein-coding"]
[1106,"chr11",51999432,52001709,"+",0,"NA","promoter-TSS (NM_009458)","promoter-TSS (NM_009458)",-104,"NM_009458",22210,"Mm.384918","NM_009458","ENSMUSG00000020390","Ube2b","2610301N02Rik|E2-14k|HR6B|Rad6b|mHR6B","ubiquitin-conjugating enzyme E2B","protein-coding"]
[1531,"chr11",102315493,102320957,"+",0,"NA","promoter-TSS (NM_001044383)","promoter-TSS (NM_001044383)",871,"NM_001302955",21429,"Mm.2845","NM_011551","ENSMUSG00000020923","Ubtf","A930005G04Rik|NOR-90|Tcfubf|UBF|UBF-1|UBF1","upstream binding transcription factor, RNA polymerase I","protein-coding"]
[2731,"chr15",59080369,59081960,"+",0,"NA","intron (NM_001146180, intron 1 of 13)","intron (NM_001146180, intron 1 of 13)",862,"NM_001146180",211401,"Mm.215481","NM_144800","ENSMUSG00000022353","Mtss1","2310003N14Rik|BC024131|D130001D01Rik|Mim|mKIAA0429","metastasis suppressor 1","protein-coding"]
[5640,"chr4",103313464,103314785,"+",0,"NA","intron (NM_025909, intron 1 of 8)","CpG",278,"NM_025909",67013,"Mm.30021","NM_025909","ENSMUSG00000035069","Oma1","2010001O09Rik|MPRP-1|ZMPOMA1","OMA1 homolog, zinc metallopeptidase (S. cerevisiae)","protein-coding"]
[8838,"chrX",57053278,57054151,"+",0,"NA","promoter-TSS (NM_029371)","promoter-TSS (NM_029371)",-120,"NM_029371",72459,"Mm.2152","NM_028242","ENSMUSG00000067873","Htatsf1","1600023H17Rik|2600017A12Rik|2700077B20Rik|TAT-SF1","HIV TAT specific factor 1","protein-coding"]
[1333,"chr11",79961909,79963534,"+",0,"NA","promoter-TSS (NM_144826)","promoter-TSS (NM_144826)",-334,"NM_144826",216987,"Mm.274961","NM_144826","ENSMUSG00000035575","Utp6","4732497O03Rik|HCA66","UTP6, small subunit (SSU) processome component, homolog (yeast)","protein-coding"]
[8022,"chr8",85298782,85300761,"+",0,"NA","promoter-TSS (NM_022997)","promoter-TSS (NM_022997)",139,"NR_028268",56452,"Mm.29709","NM_019716","ENSMUSG00000031697","Orc6","6720420I10Rik|Orc6l","origin recognition complex, subunit 6","protein-coding"]
[7478,"chr7",101301270,101302643,"+",0,"NA","exon (NM_001111111, exon 1 of 18)","exon (NM_001111111, exon 1 of 18)",132,"NM_001111111",73683,"Mm.275744","NM_001111111","ENSMUSG00000047767","Atg16l2","2410118P20Rik","autophagy related 16-like 2 (S. cerevisiae)","protein-coding"]
[2770,"chr15",76090810,76092119,"+",0,"NA","Intergenic","C-rich|Low_complexity|Low_complexity",-1451,"NM_144847",223649,"Mm.101946","NM_144847","ENSMUSG00000075590","Nrbp2","BC011468","nuclear receptor binding protein 2","protein-coding"]
[3859,"chr18",38296617,38298075,"+",0,"NA","intron (NM_001164621, intron 1 of 9)","MIR|SINE|MIR",541,"NM_001164621",56736,"Mm.228903","NM_020012","ENSMUSG00000060450","Rnf14","2310075C09Rik|2610005D23Rik|AA986456|AU041447|D18Ertd188e|D7Bwg0165e|Triad2","ring finger protein 14","protein-coding"]
[7775,"chr8",18845653,18847063,"+",0,"NA","promoter-TSS (NM_026792)","promoter-TSS (NM_026792)",79,"NM_026792",52123,"Mm.24117","NM_026792",null,"Agpat5","1110013A05Rik|D8Ertd319e","1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)","protein-coding"]
[7288,"chr7",44552930,44554490,"+",0,"NA","intron (NM_001285518, intron 1 of 9)","CpG-13068",255,"NM_009473",22260,"Mm.968","NM_009473","ENSMUSG00000060601","Nr1h2","AI194859|LXR|LXRB|LXRBSV|LXRbeta|NER1|OR-1|RIP15|UR|Unr|Unr2","nuclear receptor subfamily 1, group H, member 2","protein-coding"]
[6165,"chr5",36829787,36830637,"+",0,"NA","intron (NM_008550, intron 1 of 18)","intron (NM_008550, intron 1 of 18)",437,"NM_008550",17160,"Mm.761","NM_008550","ENSMUSG00000029119","Man2b2","mKIAA0935","mannosidase 2, alpha B2","protein-coding"]
[8656,"chr9",108262825,108265072,"+",0,"NA","promoter-TSS (NM_001276482)","promoter-TSS (NM_001276482)",10,"NM_001276494",13138,"Mm.7524","NM_010017","ENSMUSG00000039952","Dag1","D9Wsu13e|DG|Dp427|Dp71","dystroglycan 1","protein-coding"]
[4492,"chr2",35459598,35462323,"+",0,"NA","intron (NM_001308299, intron 1 of 7)","AmnSINE2|SINE|Deu",489,"NM_001308299",14594,"Mm.281124","NM_010283","ENSMUSG00000035778","Ggta1","AW108479|GALT|Gal|Ggta|Ggta-1|alpha Gal|alpha3GalT","glycoprotein galactosyltransferase alpha 1, 3","protein-coding"]
[2156,"chr13",55317574,55322618,"+",0,"NA","3' UTR (NM_009000, exon 8 of 8)","3' UTR (NM_009000, exon 8 of 8)",1884,"NM_009000",19336,"Mm.220923","NM_009000","ENSMUSG00000034789","Rab24","6530406O07Rik","RAB24, member RAS oncogene family","protein-coding"]
[1577,"chr11",107545942,107546535,"+",0,"NA","Intergenic","Intergenic",-1722,"NM_198298",78455,"Mm.272047","NM_198298","ENSMUSG00000020721","Helz","3110078M01Rik|9430093I07Rik|9630002H22Rik|AI851979|DRHC","helicase with zinc finger domain","protein-coding"]
[7511,"chr7",109613919,109617281,"+",0,"NA","intron (NM_029811, intron 1 of 18)","intron (NM_029811, intron 1 of 18)",968,"NR_037617",76954,"Mm.252009","NM_029811","ENSMUSG00000031024","St5","2010004M01Rik|2610305K15Rik","suppression of tumorigenicity 5","protein-coding"]
[1572,"chr11",106998840,107000059,"+",0,"NA","promoter-TSS (NM_010655)","promoter-TSS (NM_010655)",76,"NM_010655",16647,"Mm.12508","NM_010655","ENSMUSG00000018362","Kpna2","2410044B12Rik|IPOA1|PTAC58|Rch1","karyopherin (importin) alpha 2","protein-coding"]
[2851,"chr15",81959682,81961809,"+",0,"NA","exon (NM_013872, exon 1 of 8)","exon (NM_013872, exon 1 of 8)",185,"NM_001282040",29858,"Mm.18939","NM_013872","ENSMUSG00000022474","Pmm1","C77612","phosphomannomutase 1","protein-coding"]
[886,"chr10",121585767,121588004,"+",0,"NA","promoter-TSS (NM_019786)","promoter-TSS (NM_019786)",-91,"NM_019786",56480,"Mm.34580","NM_019786","ENSMUSG00000020115","Tbk1","1200008B05Rik|AI462036|AW048562","TANK-binding kinase 1","protein-coding"]
[4984,"chr2",180589136,180589938,"+",0,"NA","exon (NM_031373, exon 1 of 7)","exon (NM_031373, exon 1 of 7)",130,"NM_031373",72075,"Mm.250418","NM_031373","ENSMUSG00000049401","Ogfr","2010013E17Rik","opioid growth factor receptor","protein-coding"]
[4733,"chr2",125781978,125783326,"+",0,"NA","5' UTR (NM_177608, exon 1 of 18)","5' UTR (NM_177608, exon 1 of 18)",218,"NM_177608",70354,"Mm.138091","NM_133725","ENSMUSG00000035093","Secisbp2l","3110001I20Rik|AI504340|C630011I23","SECIS binding protein 2-like","protein-coding"]
[2835,"chr15",80560955,80561693,"+",0,"NA","promoter-TSS (NM_001163189)","promoter-TSS (NM_001163189)",-854,"NM_001163189",383075,"Mm.297626","NM_001163189","ENSMUSG00000050439","Enthd1","Gm1242|Gm86","ENTH domain containing 1","protein-coding"]
[1329,"chr11",79145059,79146416,"+",0,"NA","intron (NM_013571, intron 1 of 17)","CpG",617,"NM_013571",16706,"Mm.4745","NM_013571","ENSMUSG00000018334","Ksr1","AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb","kinase suppressor of ras 1","protein-coding"]
[3728,"chr17",84955759,84958940,"+",0,"NA","promoter-TSS (NM_001159496)","promoter-TSS (NM_001159496)",74,"NR_027929",68531,"Mm.249695","NR_027929","ENSMUSG00000097047","1110020A21Rik","2600015P10Rik","RIKEN cDNA 1110020A21 gene","ncRNA"]
[7410,"chr7",81706202,81707463,"+",0,"NA","promoter-TSS (NM_001164086)","promoter-TSS (NM_001164086)",93,"NM_011983",26557,"Mm.228","NM_011983","ENSMUSG00000025813","Homer2","9330120H11Rik|AW539445|CPD|Vesl-2","homer homolog 2 (Drosophila)","protein-coding"]
[5562,"chr4",56945919,56947429,"+",0,"NA","intron (NM_175518, intron 1 of 17)","intron (NM_175518, intron 1 of 17)",755,"NM_175518",242474,"Mm.296632","NM_175518",null,"Tmem245","A630051L19Rik|AI957324|D730040F13Rik","transmembrane protein 245","protein-coding"]
[3568,"chr17",42875043,42877836,"+",0,"NA","promoter-TSS (NM_009847)","promoter-TSS (NM_009847)",-15,"NM_009847",12488,"Mm.218637","NM_009847","ENSMUSG00000061665","Cd2ap","AL024079|C78928|METS-1|Mets1","CD2-associated protein","protein-coding"]
[3777,"chr18",12941110,12942524,"+",0,"NA","promoter-TSS (NM_207530)","promoter-TSS (NM_207530)",24,"NM_207530",64291,"Mm.259470","NM_020573","ENSMUSG00000044252","Osbpl1a","G430090F17Rik|Gm753|ORP-1|Osbpl1b","oxysterol binding protein-like 1A","protein-coding"]
[320,"chr1",135283221,135284008,"+",0,"NA","exon (NM_001159624, exon 1 of 10)","exon (NM_001159624, exon 1 of 10)",470,"NM_145417",215615,"Mm.291048","NM_145417","ENSMUSG00000041926","Rnpep","-","arginyl aminopeptidase (aminopeptidase B)","protein-coding"]
[6273,"chr5",96209578,96210793,"+",0,"NA","promoter-TSS (NM_001039084)","promoter-TSS (NM_001039084)",70,"NM_053158",94061,"Mm.295499","NM_053158","ENSMUSG00000029486","Mrpl1","2410002L03Rik|5830418D04Rik|AI462572|L1mt","mitochondrial ribosomal protein L1","protein-coding"]
[5663,"chr4",108618465,108620951,"+",0,"NA","promoter-TSS (NM_177045)","promoter-TSS (NM_177045)",-248,"NM_177045",319965,"Mm.151129","NM_177045","ENSMUSG00000028582","Cc2d1b","A830039B04Rik|Freud2","coiled-coil and C2 domain containing 1B","protein-coding"]
[6561,"chr5",142400974,142405229,"+",0,"NA","intron (NM_199068, intron 1 of 8)","intron (NM_199068, intron 1 of 8)",1604,"NM_199068",17425,"Mm.24214","NM_010812","ENSMUSG00000056493","Foxk1","A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf","forkhead box K1","protein-coding"]
[3528,"chr17",35240925,35243134,"+",0,"NA","promoter-TSS (NM_001252457)","promoter-TSS (NM_001252457)",283,"NM_019693",53817,"Mm.439827","NM_019693","ENSMUSG00000019432","Ddx39b","0610030D10Rik|AI428441|Bat-1|Bat1|Bat1a|D17H6S81E|D17H6S81E-1|D6S81Eh","DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B","protein-coding"]
[3756,"chr18",7625554,7626810,"+",0,"NA","intron (NM_001161620, intron 1 of 12)","intron (NM_001161620, intron 1 of 12)",681,"NM_001081287",75739,"Mm.133293","NM_001081287","ENSMUSG00000057440","Mpp7","1110068J02Rik|2810038M04Rik|5430426E14Rik|AI415104|Gm955","membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)","protein-coding"]
[811,"chr10",86010570,86012918,"+",0,"NA","intron (NM_177772, intron 1 of 15)","intron (NM_177772, intron 1 of 15)",116,"NM_177772",270757,"Mm.107214","NM_177772","ENSMUSG00000050108","Bpifc","4732454E24|Bpil2","BPI fold containing family C","protein-coding"]
[465,"chr1",181150006,181151761,"+",0,"NA","promoter-TSS (NM_030131)","promoter-TSS (NM_030131)",-48,"NM_030131",98417,"Mm.38229","NM_030131","ENSMUSG00000062169","Cnih4","AI647760|AW050376|CNIH-4|D530030D03Rik|E430023H19Rik|HSPC163","cornichon homolog 4 (Drosophila)","protein-coding"]
[819,"chr10",88730533,88732347,"+",0,"NA","promoter-TSS (NM_001037166)","promoter-TSS (NM_001037166)",26,"NM_025859",104303,"Mm.291247","NM_025859",null,"Arl1","2310008D22Rik|AU019749","ADP-ribosylation factor-like 1","protein-coding"]
[5280,"chr3",103278360,103280774,"+",0,"NA","5' UTR (NM_001079830, exon 1 of 19)","5' UTR (NM_001079830, exon 1 of 19)",274,"NM_001079830",94093,"Mm.195036","NM_053170","ENSMUSG00000033014","Trim33","8030451N04Rik|AI413936|Ecto|Tif1g","tripartite motif-containing 33","protein-coding"]
[1177,"chr11",61174109,61175003,"+",0,"NA","intron (NM_001004143, intron 1 of 12)","CpG",503,"NM_001004143",216825,"Mm.30602","NM_001004143","ENSMUSG00000042506","Usp22","AI427806","ubiquitin specific peptidase 22","protein-coding"]
[1189,"chr11",62548817,62552125,"+",0,"NA","promoter-TSS (NM_011664)","promoter-TSS (NM_011664)",-700,"NM_011664",22187,"Mm.371592","NM_011664",null,"Ubb","AL033289|Rps27a|Uba52|Ubb2|Ubc","ubiquitin B","protein-coding"]
[3680,"chr17",69416863,69418178,"+",0,"NA","non-coding (NR_026848, exon 1 of 1)","non-coding (NR_026848, exon 1 of 1)",1073,"NR_026848",77533,"Mm.266592","NR_026848",null,"C030034I22Rik","-","RIKEN cDNA C030034I22 gene","ncRNA"]
[8185,"chr8",120634116,120634948,"+",0,"NA","promoter-TSS (NM_197988)","promoter-TSS (NM_197988)",-150,"NM_197988",68918,"Mm.473736","NM_197988","ENSMUSG00000043687","1190005I06Rik","-","RIKEN cDNA 1190005I06 gene","protein-coding"]
[3768,"chr18",11656297,11658183,"+",0,"NA","promoter-TSS (NM_001081223)","promoter-TSS (NM_001081223)",-109,"NR_045526",225182,"Mm.154275","NM_175458","ENSMUSG00000041238","Rbbp8","9930104E21Rik|CtIP|RBBP-8|RIM|SAE2","retinoblastoma binding protein 8","protein-coding"]
[385,"chr1",163929191,163930724,"+",0,"NA","5' UTR (NM_028776, exon 1 of 14)","5' UTR (NM_028776, exon 1 of 14)",192,"NM_028776",240880,"Mm.389213","NM_028776","ENSMUSG00000026584","Scyl3","1200016D23Rik|6030457O16|AW214499|Pace1","SCY1-like 3 (S. cerevisiae)","protein-coding"]
[7440,"chr7",96170699,96171734,"+",0,"NA","promoter-TSS (NM_001310762)","promoter-TSS (NM_001310762)",-28,"NM_001310762",23966,"Mm.254610","NM_011858","ENSMUSG00000048078","Tenm4","Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302","teneurin transmembrane protein 4","protein-coding"]
[5095,"chr3",62338760,62339707,"+",0,"NA","5' UTR (NM_001081295, exon 1 of 14)","5' UTR (NM_001081295, exon 1 of 14)",456,"NM_001081295",622434,"Mm.153974","NM_001081295","ENSMUSG00000036885","Arhgef26","4631416L12Rik|8430436L14Rik|AI303572|AW491953|SGEF","Rho guanine nucleotide exchange factor (GEF) 26","protein-coding"]
[2578,"chr14",74946057,74948624,"+",0,"NA","intron (NM_001252132, intron 1 of 18)","CpG",537,"NM_001252132",380916,"Mm.288868","NM_001033439","ENSMUSG00000068015","Lrch1","4832412D13Rik|AI552548|AW215503|Chdc1|mKIAA1016","leucine-rich repeats and calponin homology (CH) domain containing 1","protein-coding"]
[8087,"chr8",105304099,105306978,"+",0,"NA","promoter-TSS (NM_172760)","promoter-TSS (NM_172760)",-63,"NM_172760",234683,"Mm.237966","NM_172760","ENSMUSG00000014791","Elmo3","9930107J06|BC058752|CED-12|Ced12","engulfment and cell motility 3","protein-coding"]
[7469,"chr7",100227357,100228021,"+",0,"NA","promoter-TSS (NM_027629)","promoter-TSS (NM_027629)",82,"NM_027629",70974,"Mm.440524","NM_027629","ENSMUSG00000030729","Pgm2l1","4931406N15Rik|AI553438|BM32A","phosphoglucomutase 2-like 1","protein-coding"]
[7213,"chr7",29815599,29816751,"+",0,"NA","5' UTR (NM_001145880, exon 1 of 5)","5' UTR (NM_001145880, exon 1 of 5)",103,"NM_001145880",233056,"Mm.224766","NM_146185","ENSMUSG00000011427","Zfp790","6330581L23Rik","zinc finger protein 790","protein-coding"]
[4781,"chr2",131909423,131913032,"+",0,"NA","intron (NM_011170, intron 1 of 2)","intron (NM_011170, intron 1 of 2)",1299,"NM_001278256",19122,"Mm.648","NM_011170","ENSMUSG00000079037","Prnp","AA960666|AI325101|CD230|PrP|PrP<C>|PrPC|PrPSc|Prn-i|Prn-p|Sinc|prP27-30|prP33-35C","prion protein","protein-coding"]
[4716,"chr2",121170358,121171860,"+",0,"NA","promoter-TSS (NM_153387)","promoter-TSS (NM_153387)",16,"NM_001290819",99334,"Mm.188422","NM_178889","ENSMUSG00000050619","Zscan29","AW125441|Zfp690","zinc finger SCAN domains 29","protein-coding"]
[7520,"chr7",110767922,110769855,"+",0,"NA","intron (NM_001276301, intron 1 of 14)","CpG",682,"NM_001276301",11717,"Mm.3238","NM_009667","ENSMUSG00000005686","Ampd3","-","adenosine monophosphate deaminase 3","protein-coding"]
[1166,"chr11",60218585,60223363,"+",0,"NA","promoter-TSS (NM_001313979)","promoter-TSS (NM_001313979)",-347,"NM_001313979",20787,"Mm.278701","NM_011480","ENSMUSG00000020538","Srebf1","ADD1|SREBP-1a|SREBP1|SREBP1c|bHLHd1","sterol regulatory element binding transcription factor 1","protein-coding"]
[8381,"chr9",46282747,46283479,"+",0,"NA","TTS (NM_011752)","TTS (NM_011752)",101,"NM_146000",215051,"Mm.32648","NM_146000","ENSMUSG00000032077","Bud13","AV305342|D030060M11Rik","BUD13 homolog (yeast)","protein-coding"]
[3091,"chr16",21793860,21794860,"+",0,"NA","promoter-TSS (NR_037958)","promoter-TSS (NR_037958)",13,"NR_037957",100043489,"Mm.326535","NR_037957","ENSMUSG00000097290","1300002E11Rik","1500026P21Rik","RIKEN cDNA 1300002E11 gene","ncRNA"]
[2166,"chr13",55727177,55728102,"+",0,"NA","intron (NM_028281, intron 1 of 3)","PB1D9|SINE|Alu",271,"NM_028281",72562,"Mm.28145","NM_028281","ENSMUSG00000021496","Pcbd2","2700061N24Rik|Dcoh2|Dcohm","pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2","protein-coding"]
[5637,"chr4",103113393,103115162,"+",0,"NA","promoter-TSS (NM_146254)","promoter-TSS (NM_146254)",22,"NM_146254",242584,"Mm.374877","NM_146254","ENSMUSG00000035126","Wdr78","BC028975","WD repeat domain 78","protein-coding"]
[1378,"chr11",86992397,86995417,"+",0,"NA","promoter-TSS (NM_001005341)","promoter-TSS (NM_001005341)",-145,"NM_001005341",77864,"Mm.191894","NM_001005341","ENSMUSG00000018427","Ypel2","6430570G24|E130113K08Rik","yippee-like 2 (Drosophila)","protein-coding"]
[7420,"chr7",83891477,83892698,"+",0,"NA","promoter-TSS (NM_023403)","promoter-TSS (NM_023403)",87,"NM_023403",67943,"Mm.117365","NM_023403","ENSMUSG00000038503","Mesdc2","2210015O11Rik|AW537813|mKIAA0081|mesd|msd","mesoderm development candidate 2","protein-coding"]
[1054,"chr11",32454638,32456486,"+",0,"NA","intron (NM_173784, intron 1 of 2)","CpG",190,"NM_173784",327900,"Mm.260956","NM_173784",null,"Ubtd2","4930571L24|9630054F20Rik|AI645720","ubiquitin domain containing 2","protein-coding"]
[5726,"chr4",118408839,118411390,"+",0,"NA","promoter-TSS (NM_198170)","promoter-TSS (NM_198170)",777,"NM_020000",80509,"Mm.259567","NM_020000","ENSMUSG00000006392","Med8","2210021A15Rik|AB041805|ARC32","mediator complex subunit 8","protein-coding"]
[8354,"chr9",44304869,44306170,"+",0,"NA","intron (NM_172162, intron 1 of 9)","CpG",152,"NM_172162",102423,"Mm.24570","NM_172162","ENSMUSG00000032119","Hinfp","AA589481|HiNF-P|Mizf","histone H4 transcription factor","protein-coding"]
[3797,"chr18",24529391,24530074,"+",0,"NA","intron (NM_144861, intron 1 of 6)","CpG",472,"NM_144861",225283,"Mm.28427","NM_144861","ENSMUSG00000040446","Rprd1a","C77387|mKIAA4077","regulation of nuclear pre-mRNA domain containing 1A","protein-coding"]
[3616,"chr17",47832894,47835092,"+",0,"NA","promoter-TSS (NM_010783)","promoter-TSS (NM_010783)",698,"NM_001109973",17240,"Mm.329100","NM_010783","ENSMUSG00000032717","Mdfi","I-mf|I-mfa","MyoD family inhibitor","protein-coding"]
[621,"chr10",44458078,44459788,"+",0,"NA","promoter-TSS (NM_007548)","promoter-TSS (NM_007548)",-185,"NM_007548",12142,"Mm.4800","NM_007548","ENSMUSG00000038151","Prdm1","Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo","PR domain containing 1, with ZNF domain","protein-coding"]
[6056,"chr5",8422062,8424004,"+",0,"NA","promoter-TSS (NM_001190717)","promoter-TSS (NM_001190717)",195,"NM_178766",319653,"Mm.146262","NM_178766","ENSMUSG00000054099","Slc25a40","B230315F11Rik","solute carrier family 25, member 40","protein-coding"]
[7537,"chr7",114275455,114276579,"+",0,"NA","promoter-TSS (NM_011965)","promoter-TSS (NM_011965)",99,"NM_011965",26440,"Mm.121265","NM_011965","ENSMUSG00000030751","Psma1","C2|HC2|Pros-30|alpha-type","proteasome (prosome, macropain) subunit, alpha type 1","protein-coding"]
[7389,"chr7",80246495,80246742,"+",0,"NA","5' UTR (NM_177765, exon 1 of 15)","5' UTR (NM_177765, exon 1 of 15)",242,"NM_177765",269954,"Mm.276780","NM_177765","ENSMUSG00000045467","Ttll13","1700111A04Rik|4921538O11|BC024578","tubulin tyrosine ligase-like family, member 13","protein-coding"]
[2310,"chr13",108211195,108215754,"+",0,"NA","promoter-TSS (NM_029001)","promoter-TSS (NM_029001)",-930,"NM_029001",74559,"Mm.286127","NM_029001","ENSMUSG00000021696","Elovl7","9130013K24Rik|AI840082","ELOVL family member 7, elongation of long chain fatty acids (yeast)","protein-coding"]
[7579,"chr7",126271984,126273149,"+",0,"NA","promoter-TSS (NM_145587)","promoter-TSS (NM_145587)",-53,"NM_145587",104175,"Mm.29660","NM_145587","ENSMUSG00000042978","Sbk1","Sbk","SH3-binding kinase 1","protein-coding"]
[2495,"chr14",55710898,55716163,"+",0,"NA","promoter-TSS (NM_019984)","promoter-TSS (NM_019984)",-38,"NM_001161715",21816,"Mm.41964","NM_019984","ENSMUSG00000022218","Tgm1","2310004J08Rik|Tgase1","transglutaminase 1, K polypeptide","protein-coding"]
[3052,"chr16",17233100,17234403,"+",0,"NA","intron (NM_178922, intron 1 of 2)","CpG",164,"NM_178922",58180,"Mm.261602","NM_178922","ENSMUSG00000050240","Hic2","AA409108|HRG22|mKIAA1020","hypermethylated in cancer 2","protein-coding"]
[2438,"chr14",47417929,47418947,"+",0,"NA","promoter-TSS (NM_144553)","promoter-TSS (NM_144553)",-31,"NM_144553",218977,"Mm.240543","NM_144553","ENSMUSG00000037544","Dlgap5","C77459|C86398|Dap-5|Dlg7|Hurp|mKIAA0008","discs, large (Drosophila) homolog-associated protein 5","protein-coding"]
[3246,"chr16",91545638,91548874,"+",0,"NA","intron (NM_008338, intron 1 of 6)","CpG",162,"NM_008338",15980,"Mm.249364","NM_008338",null,"Ifngr2","Ifgr2|Ifgt","interferon gamma receptor 2","protein-coding"]
[4179,"chr19",32387384,32389545,"+",0,"NA","promoter-TSS (NM_144792)","promoter-TSS (NM_144792)",-10,"NM_144792",208449,"Mm.329810","NM_144792","ENSMUSG00000040451","Sgms1","9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23","sphingomyelin synthase 1","protein-coding"]
[5899,"chr4",136051900,136053337,"+",0,"NA","exon (NM_025919, exon 2 of 6)","exon (NM_025919, exon 2 of 6)",753,"NM_025919",67025,"Mm.276856","NM_025919",null,"Rpl11","2010203J19Rik","ribosomal protein L11","protein-coding"]
[5481,"chr4",33309923,33310782,"+",0,"NA","promoter-TSS (NM_001305273)","promoter-TSS (NM_001305273)",41,"NM_001305273",24018,"Mm.240024","NM_011884","ENSMUSG00000028274","Rngtt","AU020997|HCE|MCE1","RNA guanylyltransferase and 5'-phosphatase","protein-coding"]
[8281,"chr9",21073020,21074722,"+",0,"NA","promoter-TSS (NM_001039824)","promoter-TSS (NM_001039824)",-357,"NM_001039824",68165,"Mm.490294","NM_001039824","ENSMUSG00000079677","Fdx1l","B230118G17Rik","ferredoxin 1-like","protein-coding"]
[7267,"chr7",39448949,39450185,"+",0,"NA","promoter-TSS (NM_001243021)","promoter-TSS (NM_001243021)",49,"NM_001243021",233147,"Mm.148946","NM_001243021","ENSMUSG00000030424","Zfp939","9430025M13Rik","zinc finger protein 939","protein-coding"]
[2050,"chr13",23757325,23757537,"+",0,"NA","TTS (NM_178193)","TTS (NM_178193)",494,"NM_178193",326620,"Mm.261642","NM_178193",null,"Hist1h4b","-","histone cluster 1, H4b","protein-coding"]
[3815,"chr18",32836642,32838289,"+",0,"NA","promoter-TSS (NR_045381)","promoter-TSS (NR_045381)",-178,"NR_045381",75795,"Mm.382634","NR_045381","ENSMUSG00000097553","4930455D15Rik","-","RIKEN cDNA 4930455D15 gene","ncRNA"]
[1311,"chr11",78037497,78039530,"+",0,"NA","TTS (NM_183286)","TTS (NM_183286)",572,"NM_008028",14252,"Mm.130227","NM_008028","ENSMUSG00000061981","Flot2","AI573412|Esa|reggie-2","flotillin 2","protein-coding"]
[1787,"chr12",54695285,54696798,"+",0,"NA","promoter-TSS (NM_025456)","promoter-TSS (NM_025456)",-176,"NM_025456",66266,"Mm.156440","NM_025456","ENSMUSG00000054302","Eapp","1810011O16Rik","E2F-associated phosphoprotein","protein-coding"]
[6062,"chr5",17571226,17576261,"+",0,"NA","Intergenic","Intergenic",-1073,"NM_013657",20348,"Mm.5071","NM_013657","ENSMUSG00000028780","Sema3c","1110036B02Rik|SemE|Semae","sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C","protein-coding"]
[8229,"chr8",126421962,126423494,"+",0,"NA","exon (NM_174987, exon 1 of 2)","exon (NM_174987, exon 1 of 2)",227,"NM_174987",67892,"Mm.31946","NM_174987","ENSMUSG00000051671","Coa6","1810063B05Rik|AI447995","cytochrome c oxidase assembly factor 6","protein-coding"]
[936,"chr10",128625623,128627253,"+",0,"NA","promoter-TSS (NM_013765)","promoter-TSS (NM_013765)",68,"NM_013765",27370,"Mm.32118","NM_013765","ENSMUSG00000025362","Rps26","-","ribosomal protein S26","protein-coding"]
[5736,"chr4",119217472,119217997,"+",0,"NA","intron (NM_029198, intron 1 of 6)","intron (NM_029198, intron 1 of 6)",483,"NM_029198",75180,"Mm.179335","NM_029198","ENSMUSG00000028642","4930538K18Rik","-","RIKEN cDNA 4930538K18 gene","protein-coding"]
[7417,"chr7",82866426,82867964,"+",0,"NA","promoter-TSS (NM_175366)","promoter-TSS (NM_175366)",-138,"NM_175366",108797,"Mm.306789","NM_175366","ENSMUSG00000057706","Mex3b","4931439A04Rik|M-04814|Rkhd3|mKIAA2009","mex3 homolog B (C. elegans)","protein-coding"]
[5110,"chr3",69125638,69127974,"+",0,"NA","5' UTR (NM_008467, exon 1 of 17)","5' UTR (NM_008467, exon 1 of 17)",286,"NM_008467",16649,"Mm.30601","NM_008467","ENSMUSG00000027782","Kpna4","1110058D08Rik|IPOA3","karyopherin (importin) alpha 4","protein-coding"]
[4510,"chr2",48948681,48950183,"+",0,"NA","promoter-TSS (NM_011958)","promoter-TSS (NM_011958)",-76,"NM_029924",109241,"Mm.440436","NM_029924","ENSMUSG00000036792","Mbd5","9430004D19Rik|AA536666|AI426407|C030040A15Rik|Gm1630|OTTMUSG00000012483","methyl-CpG binding domain protein 5","protein-coding"]
[701,"chr10",75857476,75861181,"+",0,"NA","TTS (NM_010798)","TTS (NM_010798)",922,"NM_010798",17319,"Mm.2326","NM_010798","ENSMUSG00000033307","Mif","GIF|Glif","macrophage migration inhibitory factor","protein-coding"]
[3710,"chr17",79354552,79356075,"+",0,"NA","promoter-TSS (NM_026514)","promoter-TSS (NM_026514)",-222,"NM_026514",260409,"Mm.140601","NM_026514","ENSMUSG00000036533","Cdc42ep3","3200001F04Rik|AA986861|Borg2|Cep3|UB1","CDC42 effector protein (Rho GTPase binding) 3","protein-coding"]
[6251,"chr5",88720275,88721906,"+",0,"NA","5' UTR (NM_026735, exon 1 of 6)","5' UTR (NM_026735, exon 1 of 6)",219,"NM_026735",68473,"Mm.35764","NM_026735","ENSMUSG00000006262","Mob1b","1110003E08Rik|AU015450|B230364F10|Mobkl1a","MOB kinase activator 1B","protein-coding"]
[8978,"chrX",166440256,166441070,"+",0,"NA","promoter-TSS (NM_025432)","promoter-TSS (NM_025432)",41,"NM_177429",237222,"Mm.247480","NM_177429","ENSMUSG00000040586","Ofd1","Cxorf5|DXGgc7e|ORF2","oral-facial-digital syndrome 1 gene homolog (human)","protein-coding"]
[3630,"chr17",55945536,55945780,"+",0,"NA","promoter-TSS (NM_146249)","promoter-TSS (NM_146249)",-399,"NM_146249",240120,"Mm.441018","NM_146249","ENSMUSG00000062101","Zfp119b","-","zinc finger protein 119b","protein-coding"]
[8696,"chr9",111116976,111119895,"+",0,"NA","intron (NM_001164838, intron 1 of 14)","CpG",324,"NM_001164838",71268,"Mm.302287","NM_027742","ENSMUSG00000032497","Lrrfip2","5133400F20Rik|AI850587","leucine rich repeat (in FLII) interacting protein 2","protein-coding"]
[7176,"chr7",27552025,27553703,"+",0,"NA","promoter-TSS (NM_175107)","promoter-TSS (NM_175107)",248,"NM_011116",18807,"Mm.6483","NM_011116","ENSMUSG00000003363","Pld3","Sam-9","phospholipase D family, member 3","protein-coding"]
[2708,"chr15",51877080,51877945,"+",0,"NA","promoter-TSS (NM_030132)","promoter-TSS (NM_030132)",71,"NM_030132",78581,"Mm.176347","NM_030132","ENSMUSG00000022313","Utp23","1700010I21Rik|AI662478|BB238373|D530033C11Rik","UTP23, small subunit (SSU) processome component, homolog (yeast)","protein-coding"]
[1650,"chr11",117986895,117988653,"+",0,"NA","intron (NM_133757, intron 1 of 9)","RSINE1|SINE|B4",917,"NM_133757",74451,"Mm.28864","NM_133757","ENSMUSG00000017715","Pgs1","2610019F11Rik|4933424M23Rik|SAF","phosphatidylglycerophosphate synthase 1","protein-coding"]
[6999,"chr6",135367299,135368618,"+",0,"NA","intron (NM_001288627, intron 1 of 4)","intron (NM_001288627, intron 1 of 4)",465,"NM_001288627",13730,"Mm.182785","NM_010128","ENSMUSG00000030208","Emp1","I-8-09|TMP","epithelial membrane protein 1","protein-coding"]
[2539,"chr14",64651886,64654483,"+",0,"NA","intron (NM_001081177, intron 1 of 39)","intron (NM_001081177, intron 1 of 39)",653,"NM_001081177",16554,"Mm.23611","NM_001081177","ENSMUSG00000060012","Kif13b","5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN","kinesin family member 13B","protein-coding"]
[3639,"chr17",56276439,56278927,"+",0,"NA","promoter-TSS (NM_174989)","promoter-TSS (NM_174989)",-916,"NM_174989",106759,"Mm.203952","NM_174989","ENSMUSG00000047123","Ticam1","AW046014|AW547018|TICAM-1|TRIF","toll-like receptor adaptor molecule 1","protein-coding"]
[2779,"chr15",76326833,76327865,"+",0,"NA","promoter-TSS (NM_175399)","promoter-TSS (NM_175399)",-48,"NM_175399",109075,"Mm.322752","NM_175399","ENSMUSG00000034259","Exosc4","1110039I09Rik|1500001N04Rik|Rrp41","exosome component 4","protein-coding"]
[2139,"chr13",51848012,51848231,"+",0,"NA","3' UTR (NM_011817, exon 4 of 4)","3' UTR (NM_011817, exon 4 of 4)",1446,"NM_011817",23882,"Mm.281298","NM_011817","ENSMUSG00000021453","Gadd45g","AI327420|C86281|CR6|DDIT2|OIG37","growth arrest and DNA-damage-inducible 45 gamma","protein-coding"]
[5573,"chr4",59625616,59626711,"+",0,"NA","promoter-TSS (NM_153158)","promoter-TSS (NM_153158)",-48,"NM_001015681",230259,"Mm.45688","NM_153158","ENSMUSG00000045071","E130308A19Rik","-","RIKEN cDNA E130308A19 gene","protein-coding"]
[768,"chr10",80854908,80855500,"+",0,"NA","promoter-TSS (NM_025349)","promoter-TSS (NM_025349)",5,"NM_025349",66094,"Mm.379101","NM_025349","ENSMUSG00000035215","Lsm7","0910001B06Rik|1110033F18Rik","LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)","protein-coding"]
[7924,"chr8",70795898,70797483,"+",0,"NA","Intergenic","Intergenic",-1445,"NR_106099",102466823,null,"NR_106099","ENSMUSG00000099031","Mir7240","Gm27487|mmu-mir-7240","microRNA 7240","ncRNA"]
[3877,"chr18",46958509,46959065,"+",0,"NA","promoter-TSS (NM_178377)","promoter-TSS (NM_178377)",-89,"NM_178377",69456,"Mm.210734","NM_178377","ENSMUSG00000042705","Commd10","2310003A05Rik|AU019438|DRWMS2","COMM domain containing 10","protein-coding"]
[1636,"chr11",116620040,116625529,"+",0,"NA","intron (NM_172572, intron 1 of 18)","intron (NM_172572, intron 1 of 18)",1468,"NM_001167680",217344,"Mm.89695","NM_172572","ENSMUSG00000020806","Rhbdf2","4732465I17Rik|Rhbdl6|cub","rhomboid 5 homolog 2 (Drosophila)","protein-coding"]
[2491,"chr14",55642008,55644467,"+",0,"NA","intron (NM_028780, intron 1 of 5)","CpG",569,"NM_028780",74140,"Mm.132857","NM_028780","ENSMUSG00000002320","Tm9sf1","1200014D02Rik|AI893436|MP70","transmembrane 9 superfamily member 1","protein-coding"]
[7730,"chr8",3466954,3467777,"+",0,"NA","intron (NM_026951, intron 1 of 4)","PB1D11|SINE|Alu",283,"NM_026951",69129,"Mm.45279","NM_026951","ENSMUSG00000069633","Pex11g","1810022F11Rik|1810049N02Rik|Pex11c|Pex11gamma","peroxisomal biogenesis factor 11 gamma","protein-coding"]
[6971,"chr6",125377184,125380823,"+",0,"NA","intron (NM_198604, intron 2 of 16)","intron (NM_198604, intron 2 of 16)",1501,"NM_198604",213522,"Mm.333396","NM_198604","ENSMUSG00000038167","Plekhg6","BC026778|Gm155","pleckstrin homology domain containing, family G (with RhoGef domain) member 6","protein-coding"]
[4976,"chr2",180025037,180025310,"+",0,"NA","5' UTR (NM_177727, exon 1 of 9)","5' UTR (NM_177727, exon 1 of 9)",186,"NM_177727",241846,"Mm.21577","NM_177727","ENSMUSG00000039108","Lsm14b","9430078B04|BC040823","LSM14 homolog B (SCD6, S. cerevisiae)","protein-coding"]
[338,"chr1",151343429,151347943,"+",0,"NA","intron (NM_054102, intron 1 of 14)","intron (NM_054102, intron 1 of 14)",1188,"NM_001039511",117198,"Mm.33764","NM_028582","ENSMUSG00000023150","Ivns1abp","1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850","influenza virus NS1A binding protein","protein-coding"]
[5478,"chr4",33188462,33189786,"+",0,"NA","exon (NM_001034867, exon 1 of 7)","exon (NM_001034867, exon 1 of 7)",613,"NM_001034867",242377,"Mm.372465","NM_001034867",null,"Pm20d2","Acy1l2|Gm424","peptidase M20 domain containing 2","protein-coding"]
[3105,"chr16",26104668,26106615,"+",0,"NA","exon (NM_173379, exon 1 of 15)","exon (NM_173379, exon 1 of 15)",143,"NM_173379",210530,"Mm.326869","NM_173379",null,"P3h2","4832416N06|AW553532|Leprel1|Mlat4","prolyl 3-hydroxylase 2","protein-coding"]
[576,"chr10",28074905,28075159,"+",0,"NA","5' UTR (NM_008983, exon 1 of 32)","5' UTR (NM_008983, exon 1 of 32)",212,"NM_008983",19272,"Mm.332303","NM_008983","ENSMUSG00000019889","Ptprk","AI853699|PTPk|RPTPkappa","protein tyrosine phosphatase, receptor type, K","protein-coding"]
[761,"chr10",80588312,80591334,"+",0,"NA","intron (NM_145421, intron 1 of 4)","intron (NM_145421, intron 1 of 4)",518,"NM_145421",216169,"Mm.29802","NM_145421","ENSMUSG00000003346","Abhd17a","1700013O15Rik|BC005632|D10Bwg1364e|Fam108a","abhydrolase domain containing 17A","protein-coding"]
[1775,"chr12",40445224,40446571,"+",0,"NA","promoter-TSS (NM_172803)","promoter-TSS (NM_172803)",-107,"NM_178845",246196,"Mm.26852","NM_172575","ENSMUSG00000055917","Zfp277","2410017E24Rik|NIRF4","zinc finger protein 277","protein-coding"]
[1415,"chr11",95040981,95041301,"+",0,"NA","exon (NM_133667, exon 1 of 11)","exon (NM_133667, exon 1 of 11)",230,"NM_133667",18604,"Mm.29768","NM_133667","ENSMUSG00000038967","Pdk2","-","pyruvate dehydrogenase kinase, isoenzyme 2","protein-coding"]
[2334,"chr14",8080292,8081991,"+",0,"NA","intron (NM_025938, intron 1 of 5)","B1_Mur4|SINE|Alu",828,"NM_025938",67053,"Mm.210048","NM_025938","ENSMUSG00000023156","Rpp14","2610511E03Rik|AA682089","ribonuclease P 14 subunit","protein-coding"]
[1078,"chr11",48870358,48872659,"+",0,"NA","promoter-TSS (NM_008326)","promoter-TSS (NM_008326)",-162,"NM_008326",15944,"Mm.29938","NM_008326","ENSMUSG00000046879","Irgm1","Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47","immunity-related GTPase family M member 1","protein-coding"]
[2530,"chr14",62759706,62762264,"+",0,"NA","5' UTR (NM_008715, exon 1 of 19)","5' UTR (NM_008715, exon 1 of 19)",127,"NM_008715",18130,"Mm.319684","NM_008715","ENSMUSG00000035161","Ints6","2900075H24Rik|AI480962|DICE1|Ddx26|HDB|Notch2l","integrator complex subunit 6","protein-coding"]
[1512,"chr11",101314968,101317407,"+",0,"NA","promoter-TSS (NM_011192)","promoter-TSS (NM_011192)",-64,"NM_011192",19192,"Mm.288477","NM_011192","ENSMUSG00000078652","Psme3","AA410043|AU020960|Ki|PA28gamma|REGgamma|pa28g","proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)","protein-coding"]
[2956,"chr15",100634883,100637640,"+",0,"NA","promoter-TSS (NM_001285414)","promoter-TSS (NM_001285414)",679,"NR_104338",207818,"Mm.26282","NM_174992","ENSMUSG00000053559","Smagp","-","small cell adhesion glycoprotein","protein-coding"]
[8056,"chr8",94771353,94772571,"+",0,"NA","promoter-TSS (NM_009142)","promoter-TSS (NM_009142)",-218,"NM_009142",20312,"Mm.103711","NM_009142","ENSMUSG00000031778","Cx3cl1","AB030188|ABCD-3|AI848747|CX3C|Cxc3|D8Bwg0439e|Scyd1","chemokine (C-X3-C motif) ligand 1","protein-coding"]
[2946,"chr15",100227147,100228728,"+",0,"NA","promoter-TSS (NM_007497)","promoter-TSS (NM_007497)",78,"NM_007497",11908,"Mm.676","NM_007497","ENSMUSG00000023027","Atf1","-","activating transcription factor 1","protein-coding"]
[328,"chr1",138962786,138965051,"+",0,"NA","intron (NM_001166501, intron 1 of 21)","CpG",209,"NM_001166501",329260,"Mm.337604","NM_181347","ENSMUSG00000056268","Dennd1b","4632404N19Rik|4930467M19Rik|6820401H01Rik|F730008N07Rik","DENN/MADD domain containing 1B","protein-coding"]
[8104,"chr8",105963310,105966308,"+",0,"NA","intron (NM_009195, intron 1 of 23)","intron (NM_009195, intron 1 of 23)",1306,"NM_001253804",20498,"Mm.292447","NM_009195","ENSMUSG00000017765","Slc12a4","AW546649|KCC1|RBCKCC1","solute carrier family 12, member 4","protein-coding"]
[6682,"chr6",34862283,34864627,"+",0,"NA","intron (NM_197986, intron 1 of 1)","intron (NM_197986, intron 1 of 1)",309,"NM_197986",68487,"Mm.248440","NM_197986","ENSMUSG00000057137","Tmem140","1110007F12Rik","transmembrane protein 140","protein-coding"]
[6144,"chr5",34369047,34370648,"+",0,"NA","promoter-TSS (NM_001243123)","promoter-TSS (NM_001243123)",-86,"NM_001243123",231128,"Mm.286885","NM_001030306","ENSMUSG00000037210","Fam193a","-","family with sequence similarity 193, member A","protein-coding"]
[628,"chr10",52416979,52419459,"+",0,"NA","intron (NM_030250, intron 1 of 4)","CpG",672,"NM_030250",52014,"Mm.199964","NM_030250","ENSMUSG00000023068","Nus1","1600027K07Rik|AU019165|AW538011|BC003223|D10Ertd438e","nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)","protein-coding"]
[1223,"chr11",69758006,69759915,"+",0,"NA","promoter-TSS (NM_001291068)","promoter-TSS (NM_001291068)",-327,"NM_001291068",20020,"Mm.16533","NM_009089","ENSMUSG00000005198","Polr2a","220kDa|Rpb1|Rpo2-1","polymerase (RNA) II (DNA directed) polypeptide A","protein-coding"]
[7525,"chr7",111778167,111778375,"+",0,"NA","intron (NM_173739, intron 1 of 10)","intron (NM_173739, intron 1 of 10)",1706,"NM_173739",233733,"Mm.323322","NM_173739","ENSMUSG00000038296","Galnt18","2900011G21Rik|BC024988|Galntl4","UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18","protein-coding"]
[4014,"chr19",4855295,4855768,"+",0,"NA","intron (NM_019861, intron 1 of 13)","intron (NM_019861, intron 1 of 13)",402,"NM_019861",56464,"Mm.29561","NM_019861","ENSMUSG00000083282","Ctsf","AI481912","cathepsin F","protein-coding"]
[4803,"chr2",144330443,144332802,"+",0,"NA","promoter-TSS (NM_152947)","promoter-TSS (NM_152947)",-260,"NM_152947",107586,"Mm.252750","NM_026924","ENSMUSG00000037279","Ovol2","1700108N11Rik|1810007D21Rik|M-OVO|M-OVO-A|M-OVO-B|MOVO|Ovo2|Zfp339|movo2","ovo-like 2 (Drosophila)","protein-coding"]
[4271,"chr19",47463499,47465292,"+",0,"NA","promoter-TSS (NM_001164717)","promoter-TSS (NM_001164717)",16,"NM_001164717",14218,"Mm.127560","NM_008018","ENSMUSG00000053617","Sh3pxd2a","2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5","SH3 and PX domains 2A","protein-coding"]
[5003,"chr2",181837496,181838982,"+",0,"NA","intron (NM_001291211, intron 1 of 6)","intron (NM_001291211, intron 1 of 6)",385,"NM_001291211",245867,"Mm.491085","NM_153594","ENSMUSG00000027589","Pcmtd2","5330414D10Rik|AI314201","protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2","protein-coding"]
[733,"chr10",79761734,79768267,"+",0,"NA","intron (NR_027505, intron 1 of 7)","intron (NR_027505, intron 1 of 7)",1952,"NM_144528",70294,"Mm.466670","NM_144528","ENSMUSG00000035890","Rnf126","2610010O19Rik","ring finger protein 126","protein-coding"]
[6249,"chr5",88563132,88566966,"+",0,"NA","promoter-TSS (NM_001289775)","promoter-TSS (NM_001289775)",9,"NM_001289775",52822,"Mm.270469","NM_027530","ENSMUSG00000029291","Rufy3","2810428M05Rik|6330416M07Rik|AW455998|AW538594|D5Bwg0860e|Ripx|Rpipx","RUN and FYVE domain containing 3","protein-coding"]
[7711,"chr7",142440782,142440968,"+",0,"NA","TTS (NM_018802)","TTS (NM_018802)",-1593,"NM_009405",21953,"Mm.39469","NM_009405","ENSMUSG00000031097","Tnni2","-","troponin I, skeletal, fast 2","protein-coding"]
[8425,"chr9",56160426,56160954,"+",0,"NA","intron (NM_019793, intron 1 of 6)","CpG",380,"NM_019793",56434,"Mm.28484","NM_019793","ENSMUSG00000032324","Tspan3","1700055K04Rik|TM4-A|Tm4sf8","tetraspanin 3","protein-coding"]
[630,"chr10",53595894,53598158,"+",0,"NA","promoter-TSS (NM_025541)","promoter-TSS (NM_025541)",65,"NM_025541",66403,"Mm.272989","NM_025541","ENSMUSG00000019857","Asf1a","2310079C17Rik|C79052","anti-silencing function 1A histone chaperone","protein-coding"]
[8980,"chrX",166510071,166510724,"+",0,"NA","promoter-TSS (NM_001007577)","promoter-TSS (NM_001007577)",81,"NM_001007577",245695,"Mm.336318","NM_001007577","ENSMUSG00000051224","Tceanc","A630018P17Rik|Gm390","transcription elongation factor A (SII) N-terminal and central domain containing","protein-coding"]
[5001,"chr2",181600241,181602242,"+",0,"NA","promoter-TSS (NM_133701)","promoter-TSS (NM_133701)",-78,"NM_133701",68879,"Mm.292001","NM_133701","ENSMUSG00000002455","Prpf6","1190003A07Rik|2610031L17Rik|ANT-1|U5-102K","PRP6 pre-mRNA splicing factor 6 homolog (yeast)","protein-coding"]
[4947,"chr2",167659060,167662007,"+",0,"NA","intron (NM_145538, intron 1 of 5)","intron (NM_145538, intron 1 of 5)",1011,"NM_145538",407243,"Mm.4863","NM_145538",null,"Tmem189","AI840826|Kua","transmembrane protein 189","protein-coding"]
[7824,"chr8",34965051,34965565,"+",0,"NA","exon (NM_175091, exon 1 of 27)","exon (NM_175091, exon 1 of 27)",382,"NM_175091",21951,"Mm.88364","NM_175091","ENSMUSG00000031529","Tnks","4930554K12Rik|AI662855|ARTD5|C86528|D130072O21Rik|TANK1|mTNKS1","tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase","protein-coding"]
[3263,"chr16",94369783,94371399,"+",0,"NA","promoter-TSS (NM_001159620)","promoter-TSS (NM_001159620)",-41,"NM_001159618",56176,"Mm.474449","NM_019543","ENSMUSG00000022940","Pigp","Dcrc|Dscr5","phosphatidylinositol glycan anchor biosynthesis, class P","protein-coding"]
[1234,"chr11",69979460,69982075,"+",0,"NA","promoter-TSS (NM_001253700)","promoter-TSS (NM_001253700)",-401,"NM_026017",67181,"Mm.41678","NM_026017","ENSMUSG00000018559","Ctdnep1","2610507E10Rik|Dullard","CTD nuclear envelope phosphatase 1","protein-coding"]
[7368,"chr7",72305719,72307849,"+",0,"NA","promoter-TSS (NM_001024703)","promoter-TSS (NM_001024703)",-189,"NM_001024703",244049,"Mm.217412","NM_001024703","ENSMUSG00000032776","Mctp2","Gm489","multiple C2 domains, transmembrane 2","protein-coding"]
[4108,"chr19",8898148,8898671,"+",0,"NA","TTS (NM_176843)","TTS (NM_176843)",352,"NM_008060",14376,"Mm.3196","NM_008060","ENSMUSG00000071650","Ganab","AU042638|G2an|GluII|mKIAA0088","alpha glucosidase 2 alpha neutral subunit","protein-coding"]
[8845,"chrX",71364296,71366526,"+",0,"NA","intron (NM_001313706, intron 1 of 15)","intron (NM_001313706, intron 1 of 15)",651,"NM_001313706",53332,"Mm.219672","NM_016985","ENSMUSG00000015214","Mtmr1","AW049210","myotubularin related protein 1","protein-coding"]
[1687,"chr11",120721235,120722435,"+",0,"NA","TTS (NM_153545)","TTS (NM_153545)",367,"NM_133223",170758,"Mm.34008","NM_133223","ENSMUSG00000018012","Rac3","Rac1B","RAS-related C3 botulinum substrate 3","protein-coding"]
[7404,"chr7",81212281,81213670,"+",0,"NA","promoter-TSS (NM_008803)","promoter-TSS (NM_008803)",-829,"NM_008803",18584,"Mm.371577","NM_008803",null,"Pde8a","AI551852|Pde8","phosphodiesterase 8A","protein-coding"]
[8494,"chr9",66123883,66125150,"+",0,"NA","intron (NM_019727, intron 1 of 14)","intron (NM_019727, intron 1 of 14)",370,"NM_019727",56440,"Mm.271891","NM_019727","ENSMUSG00000032382","Snx1","-","sorting nexin 1","protein-coding"]
[1188,"chr11",62456170,62459070,"+",0,"NA","promoter-TSS (NM_177229)","promoter-TSS (NM_177229)",-288,"NM_177229",20185,"Mm.271814","NM_011308","ENSMUSG00000018501","Ncor1","5730405M06Rik|A230020K14Rik|N-CoR|RIP13|Rxrip13|mKIAA1047","nuclear receptor co-repressor 1","protein-coding"]
[3142,"chr16",35021956,35023632,"+",0,"NA","intron (NM_023587, intron 1 of 6)","CpG",373,"NM_023587",70757,"Mm.27286","NM_023587","ENSMUSG00000035376","Hacd2","6330408J20Rik|AI255777|AI481689|Hcad2|Ptplb","3-hydroxyacyl-CoA dehydratase 2","protein-coding"]
[7455,"chr7",98702151,98703926,"+",0,"NA","promoter-TSS (NM_028410)","promoter-TSS (NM_028410)",-325,"NM_028410",72981,"Mm.4428","NM_028410","ENSMUSG00000030753","Prkrir","2900052B10Rik|Dap4|Rpkrir","protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)","protein-coding"]
[7138,"chr7",24316359,24317142,"+",0,"NA","promoter-TSS (NM_001199321)","promoter-TSS (NM_001199321)",-84,"NM_001199321",22756,"Mm.295762","NM_009568","ENSMUSG00000074282","Zfp94","-","zinc finger protein 94","protein-coding"]
[714,"chr10",78008590,78010552,"+",0,"NA","intron (NM_008826, intron 1 of 21)","CpG",225,"NM_008826",18641,"Mm.269649","NM_008826","ENSMUSG00000020277","Pfkl","AA407869|ATP-PFK|PFK-L","phosphofructokinase, liver, B-type","protein-coding"]
[4364,"chr2",24334760,24337775,"+",0,"NA","promoter-TSS (NM_031167)","promoter-TSS (NM_031167)",-593,"NM_031167",16181,"Mm.882","NM_031167","ENSMUSG00000026981","Il1rn","F630041P17Rik|IL-1ra","interleukin 1 receptor antagonist","protein-coding"]
[7293,"chr7",44856623,44857820,"+",0,"NA","promoter-TSS (NM_021549)","promoter-TSS (NM_021549)",75,"NM_001290766",59047,"Mm.238254","NM_021549","ENSMUSG00000002963","Pnkp","1810009G08Rik|PNK","polynucleotide kinase 3'- phosphatase","protein-coding"]
[5008,"chr3",7612703,7614413,"+",0,"NA","promoter-TSS (NM_001313890)","promoter-TSS (NM_001313890)",202,"NM_008371",16196,"Mm.3825","NM_008371","ENSMUSG00000040329","Il7","A630026I06Rik|Il-7|hlb368","interleukin 7","protein-coding"]
[4631,"chr2",102450503,102451785,"+",0,"NA","exon (NM_010218, exon 1 of 1)","exon (NM_010218, exon 1 of 1)",648,"NM_010218",14221,"Mm.29730","NM_010218",null,"Fjx1","-","four jointed box 1 (Drosophila)","protein-coding"]
[3285,"chr17",5941397,5941929,"+",0,"NA","intron (NM_001113352, intron 1 of 25)","CpG",383,"NM_001113352",20975,"Mm.236068","NM_011523","ENSMUSG00000023805","Synj2","AI481647|SJ2|mKIAA0348","synaptojanin 2","protein-coding"]
[1657,"chr11",119040616,119041893,"+",0,"NA","promoter-TSS (NM_013926)","promoter-TSS (NM_013926)",-341,"NM_013926",30951,"Mm.99953","NM_013926",null,"Cbx8","Pc3","chromobox 8","protein-coding"]
[3009,"chr16",10329543,10331804,"+",0,"NA","intron (NR_126064, intron 1 of 2)","RSINE1|SINE|B4",612,"NR_126064",381033,"Mm.263108","NR_126064",null,"Gm1600","Gm1776","predicted gene 1600","ncRNA"]
[8484,"chr9",65214494,65215694,"+",0,"NA","intron (NM_177460, intron 1 of 6)","G-rich|Low_complexity|Low_complexity",404,"NM_177460",214424,"Mm.31129","NM_177460","ENSMUSG00000032392","Parp16","ARTD15|BC055447|C79952|PARP-16","poly (ADP-ribose) polymerase family, member 16","protein-coding"]
[2717,"chr15",55904863,55907514,"+",0,"NA","exon (NM_016667, exon 1 of 7)","exon (NM_016667, exon 1 of 7)",761,"NM_016667",20649,"Mm.309425","NM_016667","ENSMUSG00000060429","Sntb1","-","syntrophin, basic 1","protein-coding"]
[6825,"chr6",85137380,85138105,"+",0,"NA","promoter-TSS (NM_011467)","promoter-TSS (NM_011467)",22,"NM_011467",20751,"Mm.28393","NM_011467","ENSMUSG00000033735","Spr","AA409688|ENSMUSG00000071345|Gm10328","sepiapterin reductase","protein-coding"]
[4659,"chr2",112376414,112378414,"+",0,"NA","Intergenic","Intergenic",-1797,"NM_024254",72425,"Mm.425091","NM_024254","ENSMUSG00000027132","Katnbl1","2410042D21Rik|AA166487|AA473307|AI467442","katanin p80 subunit B like 1","protein-coding"]
[771,"chr10",81057677,81060142,"+",0,"NA","intron (NM_024499, intron 1 of 11)","B1_Mur4|SINE|Alu",1245,"NM_024499",52551,"Mm.30068","NM_024499","ENSMUSG00000004937","Sgta","5330427H01Rik|AI194281|D10Ertd190e|Sgt|Stg","small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha","protein-coding"]
[5697,"chr4",116149768,116151568,"+",0,"NA","promoter-TSS (NM_001290658)","promoter-TSS (NM_001290658)",150,"NM_026651",68273,"Mm.196045","NM_026651","ENSMUSG00000028700","Pomgnt1","0610016I07Rik|4930467B06Rik","protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase","protein-coding"]
[401,"chr1",167391605,167394473,"+",0,"NA","intron (NM_025569, intron 1 of 5)","intron (NM_025569, intron 1 of 5)",758,"NM_025569",66447,"Mm.218286","NM_025569",null,"Mgst3","2010012L10Rik|2010306B17Rik|2700004G04Rik|AA516734|GST-III","microsomal glutathione S-transferase 3","protein-coding"]
[186,"chr1",75521021,75522271,"+",0,"NA","intron (NM_027886, intron 1 of 24)","CpG",117,"NM_027886",71728,"Mm.312650","NM_027886","ENSMUSG00000026213","Stk11ip","1200014D22Rik|BB131189|LIP1|LKB1IP","serine/threonine kinase 11 interacting protein","protein-coding"]
[1914,"chr12",87387117,87389190,"+",0,"NA","exon (NM_011479, exon 1 of 12)","exon (NM_011479, exon 1 of 12)",202,"NM_011479",20773,"Mm.565","NM_011479",null,"Sptlc2","LCB2|LCB2a","serine palmitoyltransferase, long chain base subunit 2","protein-coding"]
[8706,"chr9",114933607,114934836,"+",0,"NA","promoter-TSS (NM_175380)","promoter-TSS (NM_175380)",-234,"NM_175380",333433,"Mm.38198","NM_175380","ENSMUSG00000050627","Gpd1l","2210409H23Rik|D9Ertd660e","glycerol-3-phosphate dehydrogenase 1-like","protein-coding"]
[6696,"chr6",38874235,38879080,"+",0,"NA","promoter-TSS (NM_001294144)","promoter-TSS (NM_001294144)",-467,"NM_001294143",15258,"Mm.23790","NM_010433","ENSMUSG00000061436","Hipk2","1110014O20Rik|B230339E18Rik|Stank","homeodomain interacting protein kinase 2","protein-coding"]
[6495,"chr5",135743830,135744772,"+",0,"NA","promoter-TSS (NM_172541)","promoter-TSS (NM_172541)",-129,"NM_172541",215210,"Mm.11688","NM_172541","ENSMUSG00000039886","Tmem120a","2010310D06Rik|Tmpit","transmembrane protein 120A","protein-coding"]
[6940,"chr6",121183431,121184833,"+",0,"NA","non-coding (NR_130903, exon 1 of 7)","non-coding (NR_130903, exon 1 of 7)",465,"NM_001304773",74043,"Mm.491240","NM_028730","ENSMUSG00000067825","Pex26","4632428M11Rik","peroxisomal biogenesis factor 26","protein-coding"]
[1705,"chr11",121701729,121705041,"+",0,"NA","intron (NM_144797, intron 1 of 3)","CpG",958,"NM_144797",210029,"Mm.153566","NM_144797",null,"Metrnl","9430048M07Rik|BC019776","meteorin, glial cell differentiation regulator-like","protein-coding"]
[3000,"chr16",5203308,5204386,"+",0,"NA","non-coding (NR_027804, exon 1 of 9)","non-coding (NR_027804, exon 1 of 9)",165,"NM_013796",27426,"Mm.215641","NM_013796","ENSMUSG00000023143","Nagpa","AI596180|UCE","N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase","protein-coding"]
[6729,"chr6",48395614,48396053,"+",0,"NA","5' UTR (NM_133922, exon 1 of 18)","5' UTR (NM_133922, exon 1 of 18)",247,"NM_133922",77827,"Mm.107646","NM_133922","ENSMUSG00000042810","Krba1","A930040G15Rik|AI448780","KRAB-A domain containing 1","protein-coding"]
[7512,"chr7",109703813,109704225,"+",0,"NA","exon (NM_020616, exon 2 of 6)","exon (NM_020616, exon 2 of 6)",282,"NM_020616",57373,"Mm.334138","NM_020616","ENSMUSG00000031023","Akip1","BCA3|C11orf17|D7H11orf17|D930014E17Rik|ICRFP703B1614Q5.6|ORF27","A kinase (PRKA) interacting protein 1","protein-coding"]
[6558,"chr5",140418292,140420026,"+",0,"NA","promoter-TSS (NM_133916)","promoter-TSS (NM_133916)",-146,"NM_133916",27979,"Mm.21671","NM_133916","ENSMUSG00000056076","Eif3b","AL033316|AL033334|AL033369|AW208965|D5Wsu45e|EIF3-ETA|EIF3-P110|EIF3-P116|Eif3s9|PRT1","eukaryotic translation initiation factor 3, subunit B","protein-coding"]
[5390,"chr3",142764768,142766310,"+",0,"NA","intron (NM_145546, intron 1 of 6)","CpG",292,"NM_145546",229906,"Mm.271756","NM_145546","ENSMUSG00000028271","Gtf2b","-","general transcription factor IIB","protein-coding"]
[5260,"chr3",97226846,97228869,"+",0,"NA","promoter-TSS (NM_029933)","promoter-TSS (NM_029933)",-493,"NM_029933",77578,"Mm.226175","NM_029933","ENSMUSG00000038256","Bcl9","2610202E01Rik|8030475K17Rik|A330041G23Rik|Gm130","B cell CLL/lymphoma 9","protein-coding"]
[1586,"chr11",109611041,109611364,"+",0,"NA","intron (NM_145940, intron 1 of 12)","CpG",187,"NM_145940",52639,"Mm.35817","NM_145940","ENSMUSG00000041895","Wipi1","4930533H01Rik|AW411817|D11Ertd498e","WD repeat domain, phosphoinositide interacting 1","protein-coding"]
[7918,"chr8",70695244,70702838,"+",0,"NA","5' UTR (NM_010592, exon 1 of 1)","5' UTR (NM_010592, exon 1 of 1)",1302,"NM_001286944",16478,"Mm.419851","NM_010592","ENSMUSG00000071076","Jund","Jund1","jun D proto-oncogene","protein-coding"]
[1986,"chr12",112828414,112830076,"+",0,"NA","5' UTR (NM_028023, exon 1 of 2)","5' UTR (NM_028023, exon 1 of 2)",144,"NM_028023",71963,"Mm.313185","NM_028023","ENSMUSG00000047832","Cdca4","2410018C03Rik|HEPP|SEI-3","cell division cycle associated 4","protein-coding"]
[1456,"chr11",98022252,98023248,"+",0,"NA","promoter-TSS (NM_001159319)","promoter-TSS (NM_001159319)",-123,"NM_001282978",12295,"Mm.41252","NM_031173","ENSMUSG00000020882","Cacnb1","CAB1|Cchb1|Cchlb1","calcium channel, voltage-dependent, beta 1 subunit","protein-coding"]
[7471,"chr7",100492067,100498486,"+",0,"NA","intron (NM_011671, intron 2 of 7)","intron (NM_011671, intron 2 of 7)",1918,"NM_011671",22228,"Mm.171378","NM_011671",null,"Ucp2","Slc25a8","uncoupling protein 2 (mitochondrial, proton carrier)","protein-coding"]
[2060,"chr13",29983851,29987010,"+",0,"NA","exon (NM_010093, exon 1 of 7)","exon (NM_010093, exon 1 of 7)",633,"NM_010093",13557,"Mm.268356","NM_010093","ENSMUSG00000016477","E2f3","E2F3b|E2f3a","E2F transcription factor 3","protein-coding"]
[3561,"chr17",37193520,37195309,"+",0,"NA","intron (NM_023137, intron 1 of 1)","intron (NM_023137, intron 1 of 1)",522,"NM_023137",24108,"Mm.140210","NM_023137","ENSMUSG00000035186","Ubd","FAT10","ubiquitin D","protein-coding"]
[8195,"chr8",122376646,122377132,"+",0,"NA","intron (NM_001310650, intron 1 of 17)","CpG",273,"NM_001029993",76014,"Mm.241489","NM_001029993","ENSMUSG00000017478","Zc3h18","1190001B23Rik|5830416A07Rik|Nhn1","zinc finger CCCH-type containing 18","protein-coding"]
[7001,"chr6",136657608,136662875,"+",0,"NA","intron (NM_025806, intron 1 of 10)","intron (NM_025806, intron 1 of 10)",1652,"NM_025806",66857,"Mm.3311","NM_025806","ENSMUSG00000030214","Plbd1","1100001H23Rik","phospholipase B domain containing 1","protein-coding"]
[2904,"chr15",93595006,93596434,"+",0,"NA","5' UTR (NM_001033217, exon 1 of 8)","5' UTR (NM_001033217, exon 1 of 8)",171,"NM_001033217",106042,"Mm.150314","NM_001033217","ENSMUSG00000036158","Prickle1","1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1","prickle homolog 1 (Drosophila)","protein-coding"]
[7788,"chr8",22756994,22757532,"+",0,"NA","promoter-TSS (NM_008872)","promoter-TSS (NM_008872)",-459,"NM_008872",18791,"Mm.154660","NM_008872","ENSMUSG00000031538","Plat","AU020998|AW212668|D8Ertd2e|tPA","plasminogen activator, tissue","protein-coding"]
[3643,"chr17",56475338,56476200,"+",0,"NA","intron (NM_001252455, intron 1 of 27)","CpG",711,"NM_001252455",19280,"Mm.258771","NM_011218","ENSMUSG00000013236","Ptprs","AL022616|PTP|PTP-NU3|PTPNU-3|PTPsigma|Ptpt9|R-PTP-S|RPTPsigma","protein tyrosine phosphatase, receptor type, S","protein-coding"]
[5325,"chr3",115886920,115888733,"+",0,"NA","promoter-TSS (NM_027193)","promoter-TSS (NM_027193)",233,"NR_027894",68161,"Mm.392043","NR_015487","ENSMUSG00000054426","A930005H10Rik","-","RIKEN cDNA A930005H10 gene","ncRNA"]
[2346,"chr14",16363833,16367757,"+",0,"NA","intron (NM_009409, intron 1 of 35)","CpG",589,"NM_009409",21974,"Mm.130362","NM_009409","ENSMUSG00000017485","Top2b","D230016L12Rik|Top-2","topoisomerase (DNA) II beta","protein-coding"]
[2195,"chr13",67060283,67061408,"+",0,"NA","intron (NM_001166218, intron 1 of 3)","intron (NM_001166218, intron 1 of 3)",325,"NM_001166218",78251,"Mm.297247","NM_001166218","ENSMUSG00000090641","Zfp712","4921504N20Rik|mszf31|mszf89","zinc finger protein 712","protein-coding"]
[5546,"chr4",48472731,48473369,"+",0,"NA","intron (NM_172304, intron 1 of 15)","CpG",372,"NM_172304",269536,"Mm.272025","NM_172304","ENSMUSG00000028345","Tex10","2610206N19Rik|2810462N03Rik|BC006867","testis expressed gene 10","protein-coding"]
[6329,"chr5",110449116,110449853,"+",0,"NA","promoter-TSS (NM_001142642)","promoter-TSS (NM_001142642)",-981,"NM_001142642",381668,"Mm.348782","NM_028596","ENSMUSG00000043323","Fbrsl1","2410025L10Rik|AI467568|Gm1049|Gm29766|mKIAA1545","fibrosin-like 1","protein-coding"]
[5202,"chr3",90603235,90605970,"+",0,"NA","intron (NM_011311, intron 1 of 2)","intron (NM_011311, intron 1 of 2)",832,"NM_011311",20198,"Mm.3925","NM_011311","ENSMUSG00000001020","S100a4","18A2|42a|Capl|FSp1|Mts1|PeL98|metastasin|pk9a","S100 calcium binding protein A4","protein-coding"]
[2555,"chr14",70099687,70100719,"+",0,"NA","promoter-TSS (NM_021328)","promoter-TSS (NM_021328)",58,"NM_021328",57784,"Mm.24186","NM_021328","ENSMUSG00000022089","Bin3","1700015F07Rik","bridging integrator 3","protein-coding"]
[3718,"chr17",80289700,80290571,"+",0,"NA","promoter-TSS (NM_194269)","promoter-TSS (NM_194269)",-77,"NM_194269",378462,"Mm.45208","NM_194269","ENSMUSG00000045257","Morn2","Mopt","MORN repeat containing 2","protein-coding"]
[2475,"chr14",54876409,54877325,"+",0,"NA","intron (NM_001167908, intron 1 of 1)","CpG",671,"NM_001167908",105651,"Mm.297365","NM_001167908","ENSMUSG00000072494","Ppp1r3e","A630071A11Rik|AW049239|Gm1211","protein phosphatase 1, regulatory (inhibitor) subunit 3E","protein-coding"]
[3834,"chr18",35561577,35564121,"+",0,"NA","intron (NM_010771, intron 1 of 14)","CpG",691,"NM_010771",17184,"Mm.215034","NM_010771",null,"Matr3","1110061A14Rik|2810017I02Rik|AI841759|AW555618|D030046F20Rik|mKIAA0723","matrin 3","protein-coding"]
[4084,"chr19",7294524,7296461,"+",0,"NA","promoter-TSS (NM_001080390)","promoter-TSS (NM_001080390)",-45,"NM_001080390",13728,"Mm.258986","NM_007928","ENSMUSG00000024969","Mark2","EMK-1|Emk|Par-1|Par-1b","MAP/microtubule affinity regulating kinase 2","protein-coding"]
[5491,"chr4",40267994,40270600,"+",0,"NA","promoter-TSS (NR_045265)","promoter-TSS (NR_045265)",-282,"NR_045265",100504309,"Mm.392019","NR_045265",null,"Toporsos","2010003O02Rik","topoisomerase I binding, arginine/serine-rich, opposite strand","ncRNA"]
[297,"chr1",131688082,131692584,"+",0,"NA","intron (NM_001311096, intron 1 of 4)","intron (NM_001311096, intron 1 of 4)",1638,"NM_001311096",226421,"Mm.44508","NM_145509","ENSMUSG00000052688","Rab7b","5430435G22Rik","RAB7B, member RAS oncogene family","protein-coding"]
[963,"chr11",4703694,4705162,"+",0,"NA","promoter-TSS (NM_197979)","promoter-TSS (NM_197979)",-84,"NM_197979",66152,"Mm.269736","NM_197979","ENSMUSG00000059534","Uqcr10","1110020P15Rik|AA960494|Ucrc","ubiquinol-cytochrome c reductase, complex III subunit X","protein-coding"]
[8582,"chr9",96889640,96889804,"+",0,"NA","promoter-TSS (NM_153420)","promoter-TSS (NM_153420)",-248,"NM_001289645",235534,"Mm.233031","NM_153420","ENSMUSG00000043587","Pxylp1","9430094M07Rik|Acpl2|BB177120|C130099A20Rik","2-phosphoxylose phosphatase 1","protein-coding"]
[4959,"chr2",172345662,172346838,"+",0,"NA","intron (NM_025912, intron 1 of 2)","intron (NM_025912, intron 1 of 2)",673,"NM_025912",67017,"Mm.30013","NM_025912","ENSMUSG00000027495","Fam210b","2010011I20Rik|AI430961|AV108736","family with sequence similarity 210, member B","protein-coding"]
[4931,"chr2",165287355,165287816,"+",0,"NA","TTS (NM_207706)","TTS (NM_207706)",202,"NM_001252574",228875,"Mm.21184","NM_144893","ENSMUSG00000017664","Slc35c2","C85957|CGI-15|D2Wsu58e|Ovcov1","solute carrier family 35, member C2","protein-coding"]
[6340,"chr5",113226348,113227162,"+",0,"NA","promoter-TSS (NM_001033428)","promoter-TSS (NM_001033428)",-154,"NM_001033428",333048,"Mm.332586","NM_001033428","ENSMUSG00000066964","Tmem211","Gm854","transmembrane protein 211","protein-coding"]
[2031,"chr13",21453149,21453974,"+",0,"NA","intron (NM_001013786, intron 1 of 3)","intron (NM_001013786, intron 1 of 3)",166,"NM_001013786",432731,"Mm.441899","NM_001013786","ENSMUSG00000022228","Zscan26","BC068174|Zfp187|Znf187","zinc finger and SCAN domain containing 26","protein-coding"]
[5627,"chr4",99193902,99194407,"+",0,"NA","promoter-TSS (NM_001145967)","promoter-TSS (NM_001145967)",7,"NM_001145967",242557,"Mm.241663","NM_175029","ENSMUSG00000028550","Atg4c","Apg4-C|Apg4c|Atg4cl|Autl1","autophagy related 4C, cysteine peptidase","protein-coding"]
[8798,"chrX",20848581,20849091,"+",0,"NA","intron (NM_001159645, intron 1 of 5)","CpG",293,"NM_001159645",11836,"Mm.220946","NM_009703","ENSMUSG00000001127","Araf","1200013E08Rik|A-Raf|AW495444|Araf1","v-raf murine sarcoma 3611 viral oncogene homolog","protein-coding"]
[980,"chr11",5877923,5878652,"+",0,"NA","promoter-TSS (NM_008894)","promoter-TSS (NM_008894)",-31,"NM_008894",18972,"Mm.35788","NM_008894","ENSMUSG00000020471","Pold2","50kDa|p50|po1D2","polymerase (DNA directed), delta 2, regulatory subunit","protein-coding"]
[1596,"chr11",113683135,113684970,"+",0,"NA","promoter-TSS (NM_177777)","promoter-TSS (NM_177777)",99,"NM_138598",28081,"Mm.351688","NM_138598","ENSMUSG00000041629","Fam104a","D11Wsu99e","family with sequence similarity 104, member A","protein-coding"]
[5957,"chr4",147809438,147809629,"+",0,"NA","intron (NM_001127189, intron 1 of 5)","intron (NM_001127189, intron 1 of 5)",255,"NM_001127189",100041677,"Mm.327194","NM_001127189","ENSMUSG00000078495","Gm13157","OTTMUSG00000010679","predicted gene 13157","protein-coding"]
[7941,"chr8",71908550,71909292,"+",0,"NA","intron (NM_001166645, intron 1 of 2)","intron (NM_001166645, intron 1 of 2)",315,"NM_001166645",382019,"Mm.251482","NM_001166645",null,"Zfp882","ENSMUSG00000052439|Gm15468|OTTMUSG00000022410","zinc finger protein 882","protein-coding"]
[2697,"chr15",39005592,39008585,"+",0,"NA","intron (NM_008056, intron 1 of 6)","intron (NM_008056, intron 1 of 6)",755,"NM_008056",14368,"Mm.4769","NM_008056","ENSMUSG00000022297","Fzd6","Fz6","frizzled homolog 6 (Drosophila)","protein-coding"]
[2097,"chr13",41000546,41001757,"+",0,"NA","5' UTR (NM_026550, exon 1 of 10)","5' UTR (NM_026550, exon 1 of 10)",141,"NM_026550",68083,"Mm.24789","NM_026550","ENSMUSG00000038683","Pak1ip1","5830431I15Rik|5930415H02Rik|AA419825|AI314040|AW556169|Gdpd1|PIP1","PAK1 interacting protein 1","protein-coding"]
[6423,"chr5",123228323,123228557,"+",0,"NA","exon (NM_026000, exon 1 of 6)","exon (NM_026000, exon 1 of 6)",250,"NM_026000",67151,"Mm.278997","NM_026000","ENSMUSG00000029440","Psmd9","1500011J20Rik|2610202L11Rik|Bridge-1|P27","proteasome (prosome, macropain) 26S subunit, non-ATPase, 9","protein-coding"]
[1651,"chr11",118211131,118213997,"+",0,"NA","intron (NM_011180, intron 1 of 12)","intron (NM_011180, intron 1 of 12)",178,"NM_001112700",19157,"Mm.86413","NM_011180","ENSMUSG00000017132","Cyth1","CLM1|CTH-1|CYTIP|Pscd1|mKIAA4240","cytohesin 1","protein-coding"]
[5451,"chr4",14863649,14865150,"+",0,"NA","exon (NM_028264, exon 1 of 7)","exon (NM_028264, exon 1 of 7)",180,"NM_028264",72519,"Mm.279158","NM_028264","ENSMUSG00000028221","Tmem55a","2610319K07Rik|AI315591|AV001360","transmembrane protein 55A","protein-coding"]
[6778,"chr6",70791623,70792570,"+",0,"NA","promoter-TSS (NM_009075)","promoter-TSS (NM_009075)",79,"NM_009075",19895,"Mm.17905","NM_009075","ENSMUSG00000053604","Rpia","RPI","ribose 5-phosphate isomerase A","protein-coding"]
[2123,"chr13",48625123,48625971,"+",0,"NA","5' UTR (NM_001301781, exon 1 of 11)","5' UTR (NM_001301781, exon 1 of 11)",125,"NM_207232",218232,"Mm.315089","NM_207232","ENSMUSG00000038042","Ptpdc1","AI843923|AW456874|Naa-1|Ptpcd1","protein tyrosine phosphatase domain containing 1","protein-coding"]
[8713,"chr9",119087999,119089516,"+",0,"NA","promoter-TSS (NM_001293648)","promoter-TSS (NM_001293648)",-496,"NM_001293648",18799,"Mm.23963","NM_019676","ENSMUSG00000010660","Plcd1","AW212592|C79986","phospholipase C, delta 1","protein-coding"]
[5594,"chr4",82065821,82067026,"+",0,"NA","intron (NR_040659, intron 1 of 2)","intron (NR_040659, intron 1 of 2)",1043,"NR_040659",545641,"Mm.216028","NR_040659","ENSMUSG00000085022","Gm5860","EG545641","predicted gene 5860","ncRNA"]
[3701,"chr17",74717213,74718170,"+",0,"NA","promoter-TSS (NM_152817)","promoter-TSS (NM_152817)",-59,"NM_152817",74196,"Mm.209503","NM_152817","ENSMUSG00000024078","Ttc27","2610511O17Rik","tetratricopeptide repeat domain 27","protein-coding"]
[2675,"chr15",31600712,31603078,"+",0,"NA","promoter-TSS (NM_007637)","promoter-TSS (NM_007637)",-91,"NM_007637",12465,"Mm.282158","NM_007637","ENSMUSG00000022234","Cct5","Ccte|TCPE|mKIAA0098","chaperonin containing Tcp1, subunit 5 (epsilon)","protein-coding"]
[8266,"chr9",20459087,20460486,"+",0,"NA","intron (NM_011753, intron 1 of 9)","CpG",374,"NM_011753",22688,"Mm.107441","NM_011753",null,"Zfp26","5033428C05Rik|KRAB15|Zfp-26|Zfp70|Zfp81-rs1|mKIAA4196|mkr-3|mszf14|mszf52","zinc finger protein 26","protein-coding"]
[7308,"chr7",45460047,45460493,"+",0,"NA","promoter-TSS (NM_010240)","promoter-TSS (NM_010240)",-384,"NM_010240",14325,"Mm.30357","NM_010240","ENSMUSG00000050708","Ftl1","Ftl|Ftl-1|L-ferritin","ferritin light polypeptide 1","protein-coding"]
[6830,"chr6",86364736,86366588,"+",0,"NA","promoter-TSS (NM_025591)","promoter-TSS (NM_025591)",-21,"NM_025591",66488,"Mm.422972","NM_025591","ENSMUSG00000057497","Fam136a","2010309E21Rik|AW124904|Hyccin","family with sequence similarity 136, member A","protein-coding"]
[8860,"chrX",74243528,74247020,"+",0,"NA","intron (NM_001290421, intron 1 of 46)","intron (NM_001290421, intron 1 of 46)",1260,"NM_010227",192176,"Mm.295533","NM_010227","ENSMUSG00000031328","Flna","ABP-280|Dilp2|F730004A14Rik|Fln1|GENA 379|filamin-1","filamin, alpha","protein-coding"]
[6756,"chr6",56704240,56704654,"+",0,"NA","intron (NM_025520, intron 1 of 4)","CpG",252,"NM_025520",66373,"Mm.25642","NM_025520","ENSMUSG00000091625","Lsm5","2010208O10Rik|2310034K10Rik","LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)","protein-coding"]
[1287,"chr11",75587315,75589366,"+",0,"NA","exon (NM_008850, exon 1 of 12)","exon (NM_008850, exon 1 of 12)",261,"NM_008850",18738,"Mm.3128","NM_008850","ENSMUSG00000017781","Pitpna","Pitpn|vb|vibrator","phosphatidylinositol transfer protein, alpha","protein-coding"]
[4650,"chr2",109280267,109281476,"+",0,"NA","5' UTR (NM_139303, exon 1 of 17)","5' UTR (NM_139303, exon 1 of 17)",133,"NM_139303",228421,"Mm.274086","NM_139303","ENSMUSG00000027115","Kif18a","AU024633|B130001M12Rik","kinesin family member 18A","protein-coding"]
[8378,"chr9",45983951,45985325,"+",0,"NA","intron (NM_008775, intron 1 of 5)","CpG",233,"NM_008775",18475,"Mm.200859","NM_008775","ENSMUSG00000003131","Pafah1b2","AI747451|AU021353|Pafahb|mus[b]","platelet-activating factor acetylhydrolase, isoform 1b, subunit 2","protein-coding"]
[7153,"chr7",25376260,25377052,"+",0,"NA","promoter-TSS (NR_073027)","promoter-TSS (NR_073027)",-163,"NR_073028",654804,"Mm.389841","NM_001039540",null,"4732471J01Rik","-","RIKEN cDNA 4732471J01 gene","ncRNA"]
[283,"chr1",127773451,127775009,"+",0,"NA","promoter-TSS (NM_028399)","promoter-TSS (NM_028399)",66,"NM_028399",72949,"Mm.268672","NM_028399",null,"Ccnt2","2900041I18Rik|C81304|CycT2|CycT2a|CycT2b","cyclin T2","protein-coding"]
[7304,"chr7",45332904,45333759,"+",0,"NA","intron (NM_175130, intron 2 of 24)","intron (NM_175130, intron 2 of 24)",449,"NM_175130",68667,"Mm.439890","NM_175130","ENSMUSG00000038260","Trpm4","1110030C19Rik|AW047689|LTRPC4|LTrpC-4|TRPM4B","transient receptor potential cation channel, subfamily M, member 4","protein-coding"]
[5860,"chr4",133545379,133547032,"+",0,"NA","promoter-TSS (NM_010948)","promoter-TSS (NM_010948)",-178,"NM_010948",18221,"Mm.69","NM_010948","ENSMUSG00000028851","Nudc","SIG-92|Silg92","nuclear distribution gene C homolog (Aspergillus)","protein-coding"]
[4178,"chr19",32209663,32212344,"+",0,"NA","promoter-TSS (NM_001168526)","promoter-TSS (NM_001168526)",10,"NM_001168526",208449,"Mm.329810","NM_144792","ENSMUSG00000040451","Sgms1","9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23","sphingomyelin synthase 1","protein-coding"]
[3414,"chr17",27564278,27566109,"+",0,"NA","intron (NM_001002895, intron 1 of 4)","intron (NM_001002895, intron 1 of 4)",534,"NM_001002895",106672,"Mm.61488","NM_001002895",null,"AI413582","AI854251","expressed sequence AI413582","protein-coding"]
[4278,"chr19",53140578,53143418,"+",0,"NA","promoter-TSS (NM_001164100)","promoter-TSS (NM_001164100)",-758,"NM_001277100",27360,"Mm.426080","NM_013758","ENSMUSG00000025026","Add3","AI463285|R75380","adducin 3 (gamma)","protein-coding"]
[7040,"chr7",4146286,4151728,"+",0,"NA","TTS (NM_172736)","TTS (NM_172736)",865,"NM_175529",243813,"Mm.347643","NM_175529",null,"Leng9","9530024C23Rik|F630035L11Rik","leukocyte receptor cluster (LRC) member 9","protein-coding"]
[7742,"chr8",4237692,4239743,"+",0,"NA","promoter-TSS (NM_001164172)","promoter-TSS (NM_001164172)",-23,"NM_011944",26400,"Mm.3906","NM_011944","ENSMUSG00000002948","Map2k7","5930412N11Rik|JNKK 2|Jnkk2|MAPKK 7|MEK 7|Mapkk7|Mek7|Mkk7|Prkmk7|sek2","mitogen-activated protein kinase kinase 7","protein-coding"]
[7480,"chr7",101376743,101379091,"+",0,"NA","promoter-TSS (NM_001040112)","promoter-TSS (NM_001040112)",-205,"NM_001040112",69710,"Mm.277687","NM_027180","ENSMUSG00000032812","Arap1","2410002L19Rik|Centd2|mKIAA0782","ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1","protein-coding"]
[1744,"chr12",24650385,24652978,"+",0,"NA","intron (NM_178357, intron 1 of 3)","CpG",310,"NM_178357",194655,"Mm.9616","NM_178357","ENSMUSG00000020653","Klf11","9830142A17|D12Ertd427e|Tieg2|Tieg2b|Tieg3","Kruppel-like factor 11","protein-coding"]
[7683,"chr7",141008534,141011620,"+",0,"NA","intron (NM_025378, intron 1 of 1)","intron (NM_025378, intron 1 of 1)",667,"NM_025378",66141,"Mm.141021","NM_025378","ENSMUSG00000025492","Ifitm3","1110004C05Rik|Cd225|Cdw217|DSPA2b|Fgls|IP15|mil-1","interferon induced transmembrane protein 3","protein-coding"]
[864,"chr10",115381596,115386631,"+",0,"NA","promoter-TSS (NM_001033261)","promoter-TSS (NM_001033261)",322,"NM_025780",66816,"Mm.32314","NM_025780","ENSMUSG00000020137","Thap2","2900040O07Rik|9030625G08Rik|AI450385|AI649097","THAP domain containing, apoptosis associated protein 2","protein-coding"]
[1170,"chr11",60698431,60702273,"+",0,"NA","intron (NM_008502, intron 1 of 20)","intron (NM_008502, intron 1 of 20)",662,"NM_008502",16897,"Mm.285453","NM_008502","ENSMUSG00000020536","Llgl1","AI325176|Lgl1|Llglh|Mgl1","lethal giant larvae homolog 1 (Drosophila)","protein-coding"]
[7638,"chr7",128523614,128524857,"+",0,"NA","intron (NM_013863, intron 1 of 3)","CpG",652,"NM_013863",29810,"Mm.84073","NM_013863","ENSMUSG00000030847","Bag3","AA407278|Bis|mg638","BCL2-associated athanogene 3","protein-coding"]
[8307,"chr9",22225391,22227023,"+",0,"NA","intron (NR_028420, intron 1 of 4)","intron (NR_028420, intron 1 of 4)",495,"NM_001164624",235047,"Mm.290849","NM_172763","ENSMUSG00000057982","Zfp809","BB114266|C330026E23","zinc finger protein 809","protein-coding"]
[1686,"chr11",120714312,120714613,"+",0,"NA","promoter-TSS (NM_016665)","promoter-TSS (NM_016665)",509,"NM_153545",217366,"Mm.347545","NM_153545","ENSMUSG00000025145","Lrrc45","BC023296","leucine rich repeat containing 45","protein-coding"]
[4817,"chr2",148674170,148674415,"+",0,"NA","intron (NM_019761, intron 1 of 1)","intron (NM_019761, intron 1 of 1)",1651,"NM_001110159",56488,"Mm.34663","NM_019761","ENSMUSG00000036992","Nxt1","1110001N02Rik","NTF2-related export protein 1","protein-coding"]
[4745,"chr2",127269602,127271434,"+",0,"NA","5' UTR (NM_139308, exon 1 of 8)","5' UTR (NM_139308, exon 1 of 8)",289,"NM_139308",99138,"Mm.41271","NM_139308","ENSMUSG00000027367","Stard7","AI852671|AL022671|AW544915","START domain containing 7","protein-coding"]
[4143,"chr19",18712383,18713815,"+",0,"NA","promoter-TSS (NM_177640)","promoter-TSS (NM_177640)",-137,"NM_177640",225995,"Mm.28101","NM_177640","ENSMUSG00000047044","D030056L22Rik","-","RIKEN cDNA D030056L22 gene","protein-coding"]
[8010,"chr8",84965419,84965860,"+",0,"NA","exon (NM_027187, exon 2 of 8)","exon (NM_027187, exon 2 of 8)",372,"NM_027187",69724,"Mm.182470","NM_027187","ENSMUSG00000052926","Rnaseh2a","2400006P09Rik|RNASEHI|RNHIA|RNHL","ribonuclease H2, large subunit","protein-coding"]
[5837,"chr4",132344507,132345759,"+",0,"NA","intron (NM_133878, intron 1 of 9)","CpG",617,"NM_001197082",100088,"Mm.255045","NM_133878","ENSMUSG00000028896","Rcc1","4931417M11Rik|AI326872|Chc1","regulator of chromosome condensation 1","protein-coding"]
[1674,"chr11",120467128,120468214,"+",0,"NA","promoter-TSS (NM_008244)","promoter-TSS (NM_008244)",36,"NM_001159328",15239,"Mm.7919","NM_008244","ENSMUSG00000025793","Hgs","Hgr|Hrs|ZFYVE8","HGF-regulated tyrosine kinase substrate","protein-coding"]
[1065,"chr11",43433761,43434247,"+",0,"NA","intron (NM_198936, intron 1 of 15)","intron (NM_198936, intron 1 of 15)",273,"NM_198936",193116,"Mm.28200","NM_148673","ENSMUSG00000020409","Slu7","AU018913|D11Ertd730e|D3Bwg0878e","SLU7 splicing factor homolog (S. cerevisiae)","protein-coding"]
[5862,"chr4",133583422,133584832,"+",0,"NA","promoter-TSS (NM_001290742)","promoter-TSS (NM_001290742)",-246,"NM_001290742",100210,"Mm.274001","NM_133884","ENSMUSG00000028848","Gpn2","AI838661|Atpbd1b|R74630","GPN-loop GTPase 2","protein-coding"]
[8761,"chrX",7697297,7697809,"+",0,"NA","intron (NM_173747, intron 1 of 10)","PB1D10|SINE|Alu",419,"NM_173747",209416,"Mm.148753","NM_173747","ENSMUSG00000031148","Gpkow","4432411B18|DXErtd697e|DXImx41e|T54","G patch domain and KOW motifs","protein-coding"]
[4396,"chr2",26408271,26410851,"+",0,"NA","promoter-TSS (NM_001290437)","promoter-TSS (NM_001290437)",-342,"NR_110957",64436,"Mm.330070","NM_033134","ENSMUSG00000026925","Inpp5e","1200002L24Rik|72kDa|mKIAA0123","inositol polyphosphate-5-phosphatase E","protein-coding"]
[84,"chr1",45794897,45795881,"+",0,"NA","promoter-TSS (NM_028599)","promoter-TSS (NM_028599)",-112,"NM_028599",73674,"Mm.270376","NM_028599","ENSMUSG00000025995","Wdr75","1300003A18Rik|2410118I19Rik|C77608","WD repeat domain 75","protein-coding"]
[6002,"chr4",152296090,152298134,"+",0,"NA","promoter-TSS (NM_133788)","promoter-TSS (NM_133788)",-102,"NR_037908",57295,"Mm.277464","NM_133788","ENSMUSG00000039662","Icmt","1700008E11Rik|C80758|Gm13095|HSTE14|OTTMUSG00000010406|PPMT|STE14|pcCMT","isoprenylcysteine carboxyl methyltransferase","protein-coding"]
[4068,"chr19",6340402,6341739,"+",0,"NA","promoter-TSS (NM_001291787)","promoter-TSS (NM_001291787)",-90,"NM_009006",26412,"Mm.25860","NM_009006","ENSMUSG00000024948","Map4k2","AI385662|BL44|GCK|Rab8ip","mitogen-activated protein kinase kinase kinase kinase 2","protein-coding"]
[437,"chr1",175624896,175626104,"+",0,"NA","exon (NM_010209, exon 1 of 10)","exon (NM_010209, exon 1 of 10)",135,"NM_010209",14194,"Mm.41502","NM_010209",null,"Fh1","Fh|Fh-1","fumarate hydratase 1","protein-coding"]
[2749,"chr15",73748378,73748727,"+",0,"NA","intron (NM_008975, intron 1 of 5)","CpG",526,"NM_008975",19245,"Mm.390807","NM_008975","ENSMUSG00000059895","Ptp4a3","AV088979|Prl-3|pPtp4a3","protein tyrosine phosphatase 4a3","protein-coding"]
[1768,"chr12",35682469,35686388,"+",0,"NA","intron (NR_045050, intron 3 of 4)","L1_Mur2|LINE|L1",1876,"NR_045051",71581,"Mm.100110","NR_045050",null,"9130015A21Rik","-","RIKEN cDNA 9130015A21 gene","ncRNA"]
[6429,"chr5",123720200,123721540,"+",0,"NA","exon (NM_027494, exon 1 of 14)","exon (NM_027494, exon 1 of 14)",174,"NM_027494",70650,"Mm.279427","NM_027494","ENSMUSG00000029427","Zcchc8","5730565F05Rik","zinc finger, CCHC domain containing 8","protein-coding"]
[8015,"chr8",85034986,85035147,"+",0,"NA","Intergenic","Intergenic",-1849,"NM_145390",212999,"Mm.220357","NM_145390","ENSMUSG00000031691","Tnpo2","1110034O24Rik|AA414969|AI464345|AI852433|IPO3|Knpb2b|Kpnb2b|TRN2","transportin 2 (importin 3, karyopherin beta 2b)","protein-coding"]
[8309,"chr9",22307304,22307965,"+",0,"NA","promoter-TSS (NM_145612)","promoter-TSS (NM_145612)",4,"NM_145612",235050,"Mm.306038","NM_145612","ENSMUSG00000066829","Zfp810","BC005471","zinc finger protein 810","protein-coding"]
[6781,"chr6",71439412,71441534,"+",0,"NA","5' UTR (NM_024288, exon 1 of 9)","5' UTR (NM_024288, exon 1 of 9)",164,"NM_024288",68477,"Mm.28474","NM_024288","ENSMUSG00000002222","Rmnd5a","1110007A06Rik|AJ237586|AW125795|Gid2|MTA.D02.090","required for meiotic nuclear division 5 homolog A (S. cerevisiae)","protein-coding"]
[1021,"chr11",22286407,22288558,"+",0,"NA","promoter-TSS (NM_001252515)","promoter-TSS (NM_001252515)",-687,"NM_001252515",216565,"Mm.491265","NM_153078","ENSMUSG00000042302","Ehbp1","AF424697|Flj21950|NACSIN","EH domain binding protein 1","protein-coding"]
[6325,"chr5",110268738,110270381,"+",0,"NA","intron (NM_001163538, intron 1 of 5)","CpG",340,"NM_028273",72542,"Mm.61682","NM_028273","ENSMUSG00000029500","Pgam5","2610528A17Rik","phosphoglycerate mutase family member 5","protein-coding"]
[5094,"chr3",61362873,61365948,"+",0,"NA","promoter-TSS (NM_028712)","promoter-TSS (NM_028712)",-97,"NM_028712",74012,"Mm.422674","NM_028712",null,"Rap2b","4021402C18Rik|AA408554","RAP2B, member of RAS oncogene family","protein-coding"]
[6595,"chr5",146220333,146222270,"+",0,"NA","promoter-TSS (NM_001256087)","promoter-TSS (NM_001256087)",156,"NM_028774",74132,"Mm.26696","NM_028774","ENSMUSG00000029634","Rnf6","1200013I08Rik|5730419H05Rik|AA537053","ring finger protein (C3H2C3 type) 6","protein-coding"]
[4212,"chr19",41746444,41748407,"+",0,"NA","intron (NR_040320, intron 1 of 2)","MTEa|LTR|ERVL-MaLR",464,"NR_040320",100502871,"Mm.394485","NR_040320",null,"Gm19424","-","predicted gene, 19424","ncRNA"]
[934,"chr10",128498445,128499478,"+",0,"NA","promoter-TSS (NR_131151)","promoter-TSS (NR_131151)",-276,"NM_172259",216459,"Mm.291688","NM_172259","ENSMUSG00000039824","Myl6b","5730437E04Rik|BC037527|MLC1SA","myosin, light polypeptide 6B","protein-coding"]
[6451,"chr5",125440835,125442277,"+",0,"NA","promoter-TSS (NM_029752)","promoter-TSS (NM_029752)",-12,"NM_029752",76809,"Mm.290720","NM_029752","ENSMUSG00000037905","Bri3bp","2410150I18Rik|AI841257|AW742481","Bri3 binding protein","protein-coding"]
[5990,"chr4",151043856,151045741,"+",0,"NA","promoter-TSS (NM_001289878)","promoter-TSS (NM_001289878)",-133,"NM_001289878",18628,"Mm.121361","NM_011067","ENSMUSG00000028957","Per3","2810049O06Rik|mPer3","period circadian clock 3","protein-coding"]
[3537,"chr17",35770537,35772678,"+",0,"NA","promoter-TSS (NR_045459)","promoter-TSS (NR_045459)",-843,"NR_045459",74601,"Mm.410840","NR_045459","ENSMUSG00000092171","4833427F10Rik","-","RIKEN cDNA 4833427F10 gene","ncRNA"]
[4821,"chr2",150136270,150136983,"+",0,"NA","promoter-TSS (NM_023266)","promoter-TSS (NM_023266)",52,"NM_023266",104348,"Mm.485851","NM_023266","ENSMUSG00000068134","Zfp120","AI315103|E030042N05Rik|F80|MZF31|Zfp844","zinc finger protein 120","protein-coding"]
[948,"chr11",3330804,3333286,"+",0,"NA","intron (NM_178149, intron 2 of 5)","CpG-1656",1314,"NM_178149",216505,"Mm.390323","NM_178149","ENSMUSG00000034614","Pik3ip1","1500004A08Rik|5830455E04Rik|Crkd|Hgfl","phosphoinositide-3-kinase interacting protein 1","protein-coding"]
[8239,"chr9",5307507,5312376,"+",0,"NA","intron (NM_007609, intron 1 of 8)","intron (NM_007609, intron 1 of 8)",1092,"NM_007609",12363,"Mm.1569","NM_007609","ENSMUSG00000033538","Casp4","CASP-11|CASP-4|Casp11|Caspl|ich-3","caspase 4, apoptosis-related cysteine peptidase","protein-coding"]
[8361,"chr9",44396053,44397515,"+",0,"NA","promoter-TSS (NM_001293631)","promoter-TSS (NM_001293631)",-143,"NM_001293631",14385,"Mm.30087","NM_008063","ENSMUSG00000032114","Slc37a4","G6PT|G6pt1|GSD-1b|mG6PT","solute carrier family 37 (glucose-6-phosphate transporter), member 4","protein-coding"]
[6827,"chr6",85374305,85374604,"+",0,"NA","exon (NM_177466, exon 1 of 5)","exon (NM_177466, exon 1 of 5)",180,"NM_177466",52055,"Mm.220334","NM_177466","ENSMUSG00000051343","Rab11fip5","9130206P09Rik|C75969|D6Ertd32e|GAF1|RIP11","RAB11 family interacting protein 5 (class I)","protein-coding"]
[226,"chr1",91052271,91054884,"+",0,"NA","5' UTR (NM_001111311, exon 1 of 8)","5' UTR (NM_001111311, exon 1 of 8)",133,"NM_008515",16978,"Mm.45039","NM_008515","ENSMUSG00000026305","Lrrfip1","AU024550|Fliiap1","leucine rich repeat (in FLII) interacting protein 1","protein-coding"]
[4296,"chr19",58859485,58862816,"+",0,"NA","promoter-TSS (NM_175199)","promoter-TSS (NM_175199)",-166,"NM_175199",73442,"Mm.39739","NM_175199","ENSMUSG00000025092","Hspa12a","1700063D12Rik|AI118035|AI840429|AW048913|AW556406|D5Mgi40|mKIAA0417","heat shock protein 12A","protein-coding"]
[4982,"chr2",180289251,180290291,"+",0,"NA","intron (NM_173031, intron 1 of 12)","intron (NM_173031, intron 1 of 12)",108,"NM_173031",271887,"Mm.246640","NM_173031","ENSMUSG00000038980","Rbbp8nl","4732416F18","RBBP8 N-terminal like","protein-coding"]
[1430,"chr11",96776676,96778392,"+",0,"NA","promoter-TSS (NM_001163389)","promoter-TSS (NM_001163389)",21,"NM_028965",74479,"Mm.270781","NM_028965","ENSMUSG00000020876","Snx11","4933439F10Rik|A930041K09Rik|AI117694","sorting nexin 11","protein-coding"]
[7473,"chr7",100582513,100583533,"+",0,"NA","5' UTR (NM_198831, exon 1 of 8)","5' UTR (NM_198831, exon 1 of 8)",107,"NM_198831",52443,"Mm.473730","NM_198831",null,"Mrpl48","1810030E20Rik|2610028L11Rik|CGI-118|D4Ertd786e","mitochondrial ribosomal protein L48","protein-coding"]
[1145,"chr11",58938343,58938917,"+",0,"NA","exon (NM_022423, exon 1 of 4)","exon (NM_022423, exon 1 of 4)",276,"NM_022423",108660,"Mm.249986","NM_022423","ENSMUSG00000020496","Rnf187","2410016F01Rik|AB030190|RACO-1","ring finger protein 187","protein-coding"]
[8960,"chrX",157491603,157491857,"+",0,"NA","intron (NM_009214, intron 1 of 10)","CpG",316,"NM_009214",20603,"Mm.18652","NM_009214","ENSMUSG00000071708","Sms","AI427066|Gy|SPMSY|SpmST|gyro","spermine synthase","protein-coding"]
[3229,"chr16",87495206,87496393,"+",0,"NA","promoter-TSS (NM_009840)","promoter-TSS (NM_009840)",70,"NM_009840",12469,"Mm.328673","NM_009840","ENSMUSG00000025613","Cct8","AI132397|Cctq|Tcpq","chaperonin containing Tcp1, subunit 8 (theta)","protein-coding"]
[2466,"chr14",54426151,54427383,"+",0,"NA","promoter-TSS (NM_026851)","promoter-TSS (NM_026851)",-142,"NM_026851",68836,"Mm.248163","NM_026851","ENSMUSG00000010406","Mrpl52","1110047B07Rik","mitochondrial ribosomal protein L52","protein-coding"]
[62,"chr1",37995934,37999333,"+",0,"NA","promoter-TSS (NM_172054)","promoter-TSS (NM_172054)",-377,"NM_198303",226982,"Mm.260943","NM_198303","ENSMUSG00000026083","Eif5b","A030003E17Rik|BC018347|IF2","eukaryotic translation initiation factor 5B","protein-coding"]
[8209,"chr8",123253185,123255105,"+",0,"NA","promoter-TSS (NM_020497)","promoter-TSS (NM_020497)",-50,"NM_020497",57247,"Mm.379084","NM_020497","ENSMUSG00000001065","Zfp276","AW048709|D8Ertd370e|D8Ertd377e|Znf276","zinc finger protein (C2H2 type) 276","protein-coding"]
[6749,"chr6",53286829,53288300,"+",0,"NA","intron (NR_015553, intron 1 of 4)","CpG",269,"NR_015553",320189,"Mm.227444","NR_015553",null,"9430076C15Rik","-","RIKEN cDNA 9430076C15 gene","ncRNA"]
[7427,"chr7",89337828,89339671,"+",0,"NA","promoter-TSS (NM_028343)","promoter-TSS (NM_028343)",38,"NM_028343",72759,"Mm.208477","NM_028343","ENSMUSG00000039428","Tmem135","2810439K08Rik|AW319712|PMP52","transmembrane protein 135","protein-coding"]
[4794,"chr2",139493670,139496452,"+",0,"NA","intron (NM_175467, intron 2 of 12)","intron (NM_175467, intron 2 of 12)",1141,"NM_175467",228677,"Mm.100450","NM_175467","ENSMUSG00000039092","Sptlc3","C130053K05Rik","serine palmitoyltransferase, long chain base subunit 3","protein-coding"]
[6719,"chr6",47594018,47595954,"+",0,"NA","promoter-TSS (NM_007971)","promoter-TSS (NM_007971)",44,"NM_007971",14056,"Mm.246688","NM_007971","ENSMUSG00000029687","Ezh2","Enx-1|Enx1h|KMT6|mKIAA4065","enhancer of zeste 2 polycomb repressive complex 2 subunit","protein-coding"]
[6505,"chr5",136566125,136567935,"+",0,"NA","intron (NM_198602, intron 1 of 22)","CpG",460,"NM_001291234",13047,"Mm.320317","NM_009986","ENSMUSG00000029705","Cux1","CDP|Cutl1|Cux|Cux-1","cut-like homeobox 1","protein-coding"]
[3697,"chr17",74338227,74339766,"+",0,"NA","promoter-TSS (NM_001162870)","promoter-TSS (NM_001162870)",9,"NM_016962",50850,"Mm.19804","NM_016962","ENSMUSG00000024068","Spast","Spg4|mKIAA1083","spastin","protein-coding"]
[3466,"chr17",32786497,32786956,"+",0,"NA","intron (NM_172458, intron 1 of 3)","intron (NM_172458, intron 1 of 3)",1561,"NM_172458",208292,"Mm.38813","NM_172458",null,"Zfp871","4732483N19|9030612M13Rik|AI118577|AI265322|mKIAA3006","zinc finger protein 871","protein-coding"]
[1999,"chr13",3537320,3539372,"+",0,"NA","intron (NM_008112, intron 1 of 10)","CpG",271,"NM_008112",14569,"Mm.153226","NM_008112","ENSMUSG00000021218","Gdi2","GDI-B|GDIB|Gdi3","guanosine diphosphate (GDP) dissociation inhibitor 2","protein-coding"]
[3632,"chr17",56004804,56006380,"+",0,"NA","promoter-TSS (NM_145934)","promoter-TSS (NM_145934)",14,"NM_145934",106766,"Mm.204991","NM_145934","ENSMUSG00000038781","Stap2","AW049765|STAP-2","signal transducing adaptor family member 2","protein-coding"]
[6030,"chr4",155846931,155848719,"+",0,"NA","exon (NM_010091, exon 1 of 15)","exon (NM_010091, exon 1 of 15)",508,"NM_010091",13542,"Mm.3400","NM_010091","ENSMUSG00000029071","Dvl1","Dvl|mKIAA4029","dishevelled, dsh homolog 1 (Drosophila)","protein-coding"]
[6953,"chr6",124807788,124810562,"+",0,"NA","intron (NM_013539, intron 1 of 2)","intron (NM_013539, intron 1 of 2)",257,"NM_001306053",14794,"Mm.261906","NM_013539","ENSMUSG00000038451","Spsb2","AI461677|C9|Grcc9|SSB2","splA/ryanodine receptor domain and SOCS box containing 2","protein-coding"]
[5969,"chr4",148590739,148592262,"+",0,"NA","promoter-TSS (NM_009272)","promoter-TSS (NM_009272)",-13,"NM_009272",20810,"Mm.10","NM_009272","ENSMUSG00000006442","Srm","AA407669|SpdST|SpdSy","spermidine synthase","protein-coding"]
[7968,"chr8",79398003,79399774,"+",0,"NA","intron (NM_008539, intron 1 of 6)","CpG",580,"NM_008539",17125,"Mm.223717","NM_008539","ENSMUSG00000031681","Smad1","AI528653|Madh1|Madr1|Mlp1|MusMLP","SMAD family member 1","protein-coding"]
[6082,"chr5",24423341,24426379,"+",0,"NA","promoter-TSS (NM_009207)","promoter-TSS (NM_009207)",-372,"NM_009207",20535,"Mm.4580","NM_009207","ENSMUSG00000028962","Slc4a2","Ae2|B3RP","solute carrier family 4 (anion exchanger), member 2","protein-coding"]
[7907,"chr8",70439135,70439968,"+",0,"NA","promoter-TSS (NM_001004062)","promoter-TSS (NM_001004062)",22,"NM_001004062",382056,"Mm.227767","NM_001004062","ENSMUSG00000003575","Crtc1","AI413414|Mect1|R74955|TORC1|mKIAA0616","CREB regulated transcription coactivator 1","protein-coding"]
[6812,"chr6",83134056,83138189,"+",0,"NA","promoter-TSS (NM_009106)","promoter-TSS (NM_009106)",314,"NM_001136227",20166,"Mm.4139","NM_009106","ENSMUSG00000034930","Rtkn","-","rhotekin","protein-coding"]
[5808,"chr4",129460845,129462279,"+",0,"NA","promoter-TSS (NM_133889)","promoter-TSS (NM_133889)",-117,"NM_133889",100383,"Mm.17918","NM_133889","ENSMUSG00000040859","Bsdc1","1110063F24Rik|AW011758","BSD domain containing 1","protein-coding"]
[2046,"chr13",23620756,23623024,"+",0,"NA","promoter-TSS (NM_001177653)","promoter-TSS (NM_001177653)",668,"NM_015787",50709,"Mm.170587","NM_015787","ENSMUSG00000051627","Hist1h1e","H1-4|H1.4|H1e|H1f4|H1s-4|H1var2","histone cluster 1, H1e","protein-coding"]
[8682,"chr9",109832586,109833457,"+",0,"NA","intron (NM_018757, intron 1 of 6)","intron (NM_018757, intron 1 of 6)",227,"NM_018757",54369,"Mm.12951","NM_018757","ENSMUSG00000032478","Nme6","nm23-M6","NME/NM23 nucleoside diphosphate kinase 6","protein-coding"]
[7985,"chr8",83996095,83996879,"+",0,"NA","TTS (NM_008854)","TTS (NM_008854)",-1185,"NM_001081415",666704,"Mm.298091","NM_001081415","ENSMUSG00000079003","Samd1","AA589507","sterile alpha motif domain containing 1","protein-coding"]
[6302,"chr5",106695511,106697280,"+",0,"NA","intron (NM_026856, intron 1 of 6)","CpG",435,"NM_026856",52397,"Mm.249474","NM_026856","ENSMUSG00000049606","Zfp644","1110068L01Rik|AA408882|BM-005|D5Ertd689e|Zep-2","zinc finger protein 644","protein-coding"]
[8858,"chrX",73965856,73968165,"+",0,"NA","promoter-TSS (NM_008224)","promoter-TSS (NM_008224)",-653,"NM_008224",15161,"Mm.491126","NM_008224","ENSMUSG00000031386","Hcfc1","AW060991|HCF|HCF1","host cell factor C1","protein-coding"]
[6604,"chr5",147859366,147861503,"+",0,"NA","promoter-TSS (NM_025624)","promoter-TSS (NM_025624)",-194,"NM_025624",66537,"Mm.332855","NM_025624",null,"Pomp","2510048O06Rik|Ump1","proteasome maturation protein","protein-coding"]
[1934,"chr12",101082576,101084384,"+",0,"NA","non-coding (NR_038050, exon 1 of 2)","non-coding (NR_038050, exon 1 of 2)",222,"NM_211355",68734,"Mm.87077","NM_211355","ENSMUSG00000041846","Smek1","1110034C04Rik|BC064465|mKIAA2010","SMEK homolog 1, suppressor of mek1 (Dictyostelium)","protein-coding"]
[1916,"chr12",87471362,87472291,"+",0,"NA","intron (NM_025507, intron 1 of 13)","intron (NM_025507, intron 1 of 13)",473,"NM_025507",66354,"Mm.271174","NM_025507","ENSMUSG00000021039","Snw1","2310008B08Rik|AW048543|NCoA-62|SKIP|Skiip","SNW domain containing 1","protein-coding"]
[4232,"chr19",44066205,44072372,"+",0,"NA","exon (NM_145502, exon 1 of 11)","exon (NM_145502, exon 1 of 11)",398,"NM_145502",226144,"Mm.279865","NM_145502","ENSMUSG00000025198","Erlin1","2810439N09Rik|C80197|Keo4|Spfh1","ER lipid raft associated 1","protein-coding"]
[1722,"chr12",8673351,8675623,"+",0,"NA","promoter-TSS (NM_030723)","promoter-TSS (NM_030723)",-194,"NM_030723",80913,"Mm.341243","NM_030723","ENSMUSG00000020594","Pum2","5730503J23Rik|Pumm2","pumilio RNA-binding family member 2","protein-coding"]
[4568,"chr2",75938369,75938858,"+",0,"NA","promoter-TSS (NM_028235)","promoter-TSS (NM_028235)",-151,"NM_028235",72421,"Mm.275109","NM_028235","ENSMUSG00000075273","Ttc30b","2510042P03Rik|Tcc30b","tetratricopeptide repeat domain 30B","protein-coding"]
[950,"chr11",3537894,3539798,"+",0,"NA","intron (NM_001284428, intron 1 of 21)","intron (NM_001284428, intron 1 of 21)",446,"NM_013870",29856,"Mm.188516","NM_013870","ENSMUSG00000020439","Smtn","smsmo","smoothelin","protein-coding"]
[1445,"chr11",97574378,97576881,"+",0,"NA","promoter-TSS (NM_018873)","promoter-TSS (NM_018873)",-503,"NM_018873",56013,"Mm.342665","NM_018873","ENSMUSG00000038453","Srcin1","P140|SNIP|mKIAA1684|p140Cap","SRC kinase signaling inhibitor 1","protein-coding"]
[8481,"chr9",64961010,64961410,"+",0,"NA","5' UTR (NM_175153, exon 1 of 13)","5' UTR (NM_175153, exon 1 of 13)",280,"NM_175153",69882,"Mm.272616","NM_175153","ENSMUSG00000034263","Vwa9","2010321M09Rik","von Willebrand factor A domain containing 9","protein-coding"]
[3429,"chr17",28621305,28623396,"+",0,"NA","intron (NM_016795, intron 1 of 15)","CpG-6184",104,"NM_016795",20815,"Mm.15252","NM_016795","ENSMUSG00000004865","Srpk1","AU017960","serine/arginine-rich protein specific kinase 1","protein-coding"]
[3580,"chr17",45684856,45687175,"+",0,"NA","promoter-TSS (NM_026732)","promoter-TSS (NM_026732)",203,"NM_198167",224807,"Mm.157904","NM_198167","ENSMUSG00000036026","Tmem63b","BC026370","transmembrane protein 63b","protein-coding"]
[3073,"chr16",18836284,18837319,"+",0,"NA","exon (NM_001033164, exon 2 of 3)","exon (NM_001033164, exon 2 of 3)",221,"NM_001033164",72307,"Mm.36907","NM_001033164","ENSMUSG00000071632","2510002D24Rik","2410043I01Rik|AA163535|AA409624|DXMgi27","RIKEN cDNA 2510002D24 gene","protein-coding"]
[1992,"chr12",113097928,113099404,"+",0,"NA","intron (NM_054081, intron 1 of 19)","GC_rich|Low_complexity|Low_complexity",388,"NM_054081",116870,"Mm.212577","NM_054081","ENSMUSG00000021144","Mta1","-","metastasis associated 1","protein-coding"]
[6912,"chr6",116192781,116193840,"+",0,"NA","promoter-TSS (NM_177412)","promoter-TSS (NM_177412)",64,"NM_177412",330401,"Mm.425352","NM_177412","ENSMUSG00000030126","Tmcc1","3632431M01Rik|mKIAA0779","transmembrane and coiled coil domains 1","protein-coding"]
[1466,"chr11",98551145,98551789,"+",0,"NA","exon (NM_199419, exon 2 of 7)","exon (NM_199419, exon 2 of 7)",370,"NM_001166494",69376,"Mm.55996","NM_027061","ENSMUSG00000017195","Zpbp2","1700017D11Rik|2610022C02Rik|ZPBPL","zona pellucida binding protein 2","protein-coding"]
[4248,"chr19",45748952,45749770,"+",0,"NA","TTS (NM_023799)","TTS (NM_023799)",202,"NM_008723",18150,"Mm.1406","NM_008723","ENSMUSG00000056209","Npm3","Nub1","nucleoplasmin 3","protein-coding"]
[4534,"chr2",61711338,61712488,"+",0,"NA","intron (NM_021526, intron 1 of 11)","CpG",219,"NM_021526",59029,"Mm.218198","NM_021526","ENSMUSG00000026914","Psmd14","2610312C03Rik|3200001M20Rik|AA986732|Pad1|Poh1|rpm11","proteasome (prosome, macropain) 26S subunit, non-ATPase, 14","protein-coding"]
[778,"chr10",81289596,81293214,"+",0,"NA","promoter-TSS (NM_013769)","promoter-TSS (NM_013769)",-138,"NM_013769",27375,"Mm.27984","NM_013769","ENSMUSG00000034917","Tjp3","-","tight junction protein 3","protein-coding"]
[5166,"chr3",89213171,89215034,"+",0,"NA","exon (NM_001161824, exon 1 of 8)","exon (NM_001161824, exon 1 of 8)",233,"NM_001161824",17827,"Mm.280943","NM_013604","ENSMUSG00000064068","Mtx1","Gcap6|Mtx","metaxin 1","protein-coding"]
[5072,"chr3",51659394,51662318,"+",0,"NA","promoter-TSS (NM_174995)","promoter-TSS (NM_174995)",-323,"NM_174995",211666,"Mm.24679","NM_174995","ENSMUSG00000074604","Mgst2","GST2|MGST-II","microsomal glutathione S-transferase 2","protein-coding"]
[6297,"chr5",104508370,104508946,"+",0,"NA","intron (NM_001166581, intron 1 of 1)","CpG",306,"NM_001166581",100042165,"Mm.482189","NM_001166581","ENSMUSG00000079065","BC005561","-","cDNA sequence BC005561","protein-coding"]
[4168,"chr19",29361455,29362862,"+",0,"NA","promoter-TSS (NM_026362)","promoter-TSS (NM_026362)",-287,"NM_026362",67759,"Mm.275511","NM_026362","ENSMUSG00000016495","Plgrkt","1110007H22Rik|5033414D02Rik|AI852040|Plg-R(KT)|Plg-RKT","plasminogen receptor, C-terminal lysine transmembrane protein","protein-coding"]
[7664,"chr7",135605314,135606125,"+",0,"NA","promoter-TSS (NM_001316679)","promoter-TSS (NM_001316679)",-109,"NM_001316679",19267,"Mm.945","NM_011212","ENSMUSG00000041836","Ptpre","PTPe|PTPepsilon|RPTPepsilon","protein tyrosine phosphatase, receptor type, E","protein-coding"]
[3744,"chr17",88529585,88530488,"+",0,"NA","promoter-TSS (NM_028658)","promoter-TSS (NM_028658)",-88,"NM_028658",73825,"Mm.271817","NM_028658","ENSMUSG00000034709","Ppp1r21","1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1","protein phosphatase 1, regulatory subunit 21","protein-coding"]
[3220,"chr16",78574561,78578127,"+",0,"NA","5' UTR (NM_001252438, exon 1 of 5)","5' UTR (NM_001252438, exon 1 of 5)",344,"NM_001252438",67102,"Mm.37332","NM_025967",null,"D16Ertd472e","1700010I10Rik|2310009O17Rik|E330003K22Rik|Eurl","DNA segment, Chr 16, ERATO Doi 472, expressed","protein-coding"]
[6411,"chr5",122391941,122392688,"+",0,"NA","intron (NM_019824, intron 1 of 6)","intron (NM_019824, intron 1 of 6)",386,"NM_019824",56378,"Mm.275942","NM_019824","ENSMUSG00000029465","Arpc3","1110006A04Rik|21kDa|AA408672|AI788639|p21-Ar|p21Arc","actin related protein 2/3 complex, subunit 3","protein-coding"]
[7586,"chr7",126565607,126567209,"+",0,"NA","promoter-TSS (NM_146200)","promoter-TSS (NM_146200)",-42,"NM_146200",56347,"Mm.22776","NM_146200","ENSMUSG00000030738","Eif3c","110kDa|3230401O13Rik|Eif3s8|NIPIL(A3)|NipilA3|Xs|Xsl","eukaryotic translation initiation factor 3, subunit C","protein-coding"]
[3854,"chr18",37932887,37935948,"+",0,"NA","intron (NM_001305981, intron 1 of 28)","intron (NM_001305981, intron 1 of 28)",1006,"NM_001305980",13367,"Mm.195916","NM_007858","ENSMUSG00000024456","Diaph1","D18Wsu154e|Dia1|Diap1|Drf1|p140mDia","diaphanous related formin 1","protein-coding"]
[7744,"chr8",4275371,4276384,"+",0,"NA","promoter-TSS (NM_011592)","promoter-TSS (NM_011592)",28,"NM_011592",21856,"Mm.195249","NM_011592","ENSMUSG00000002949","Timm44","0710005E20Rik|D8Ertd118e|Mimt44|Tim44","translocase of inner mitochondrial membrane 44","protein-coding"]
[8906,"chrX",102188944,102189264,"+",0,"NA","intron (NM_009094, intron 1 of 6)","intron (NM_009094, intron 1 of 6)",287,"NM_009094",20102,"Mm.66","NM_009094","ENSMUSG00000031320","Rps4x","Rps4|Rps4-1","ribosomal protein S4, X-linked","protein-coding"]
[1607,"chr11",115475145,115476157,"+",0,"NA","promoter-TSS (NM_177778)","promoter-TSS (NM_177778)",-26,"NM_177778",276905,"Mm.38019","NM_177778","ENSMUSG00000057219","Armc7","A630084C13|BC023126","armadillo repeat containing 7","protein-coding"]
[8036,"chr8",88695722,88698889,"+",0,"NA","intron (NM_173369, intron 1 of 16)","CpG",277,"NM_001128171",74256,"Mm.490395","NM_173369","ENSMUSG00000036712","Cyld","2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849","cylindromatosis (turban tumor syndrome)","protein-coding"]
[3893,"chr18",56974935,56975835,"+",0,"NA","promoter-TSS (NM_029909)","promoter-TSS (NM_029909)",-6,"NM_029909",77422,"Mm.256874","NM_029909","ENSMUSG00000024592","C330018D20Rik","AU018666","RIKEN cDNA C330018D20 gene","protein-coding"]
[2617,"chr14",118050863,118051827,"+",0,"NA","intron (NM_010024, intron 1 of 7)","intron (NM_010024, intron 1 of 7)",901,"NM_010024",13190,"Mm.19987","NM_010024","ENSMUSG00000022129","Dct","DT|TRP-2|TRP2|Tyrp-2|Tyrp2|slaty|slt","dopachrome tautomerase","protein-coding"]
[4187,"chr19",34163715,34167862,"+",0,"NA","5' UTR (NM_024204, exon 1 of 6)","5' UTR (NM_024204, exon 1 of 6)",253,"NM_024204",52024,"Mm.183030","NM_024204","ENSMUSG00000024774","Ankrd22","5430429D21Rik|D19Ertd675e","ankyrin repeat domain 22","protein-coding"]
[579,"chr10",30199974,30200874,"+",0,"NA","exon (NM_001109747, exon 1 of 3)","exon (NM_001109747, exon 1 of 3)",116,"NM_001109747",66311,"Mm.251779","NM_001109747","ENSMUSG00000075266","Cenpw","2610036L11Rik|Cug2","centromere protein W","protein-coding"]
[4701,"chr2",119972567,119973662,"+",0,"NA","exon (NM_011941, exon 1 of 30)","exon (NM_011941, exon 1 of 30)",415,"NM_011941",26390,"Mm.330501","NM_011941","ENSMUSG00000033902","Mapkbp1","2810483F24Rik|AW123212|JNKBP-1|Jnkbp1|mKIAA0596","mitogen-activated protein kinase binding protein 1","protein-coding"]
[3301,"chr17",12960280,12960715,"+",0,"NA","intron (NM_009338, intron 1 of 8)","CpG",228,"NM_009338",110460,"Mm.439711","NM_009338","ENSMUSG00000023832","Acat2","AW742799|Tcp-1x|Tcp1-rs1","acetyl-Coenzyme A acetyltransferase 2","protein-coding"]
[3136,"chr16",33056192,33057169,"+",0,"NA","promoter-TSS (NM_178378)","promoter-TSS (NM_178378)",166,"NM_021338",57808,"Mm.19355","NM_021338","ENSMUSG00000060636","Rpl35a","2810431L15Rik|Rpl35","ribosomal protein L35A","protein-coding"]
[8220,"chr8",124520844,124521404,"+",0,"NA","intron (NM_029746, intron 1 of 17)","intron (NM_029746, intron 1 of 17)",357,"NM_029746",76332,"Mm.240108","NM_029746","ENSMUSG00000031979","Cog2","1190002B08Rik|2700012E02Rik|C86089|Ldlc","component of oligomeric golgi complex 2","protein-coding"]
[4317,"chr2",4919066,4919615,"+",0,"NA","intron (NM_010726, intron 1 of 8)","intron (NM_010726, intron 1 of 8)",344,"NM_010726",16922,"Mm.391704","NM_010726","ENSMUSG00000026664","Phyh","AI256161|AI265699|Lnap1|PAHX","phytanoyl-CoA hydroxylase","protein-coding"]
[5863,"chr4",133630672,133633457,"+",0,"NA","intron (NM_001017968, intron 1 of 7)","MIRb|SINE|MIR",1365,"NM_001017968",503610,"Mm.331948","NM_001017968",null,"Zdhhc18","-","zinc finger, DHHC domain containing 18","protein-coding"]
[5061,"chr3",40948786,40951448,"+",0,"NA","promoter-TSS (NM_001040399)","promoter-TSS (NM_001040399)",-514,"NM_001040399",214048,"Mm.46782","NM_027663","ENSMUSG00000025762","Larp1b","1700108L22Rik|4933421B21Rik|AA690246|Larp2","La ribonucleoprotein domain family, member 1B","protein-coding"]
[1628,"chr11",116197931,116199989,"+",0,"NA","promoter-TSS (NM_001271898)","promoter-TSS (NM_001271898)",85,"NM_001271898",11430,"Mm.356689","NM_015729","ENSMUSG00000020777","Acox1","AOX|Acox|D130055E20Rik|Paox","acyl-Coenzyme A oxidase 1, palmitoyl","protein-coding"]
[6011,"chr4",154963849,154964813,"+",0,"NA","intron (NR_131230, intron 1 of 18)","CpG",208,"NR_131230",269614,"Mm.30042","NM_172990","ENSMUSG00000029056","Pank4","D030031I12Rik|R75150","pantothenate kinase 4","protein-coding"]
[3219,"chr16",78375152,78377524,"+",0,"NA","intron (NM_001297747, intron 1 of 4)","CpG",419,"NR_002700",654432,"Mm.458574","NR_002700","ENSMUSG00000044645","Gm7334","EG654432","B-cell translocation gene 3 pseudogene","pseudo"]
[8161,"chr8",115705526,115709220,"+",0,"NA","promoter-TSS (NM_001025577)","promoter-TSS (NM_001025577)",-479,"NM_001025577",17132,"Mm.275549","NM_001025577",null,"Maf","2810401A20Rik|A230108G15Rik|AW047063|c-maf","avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog","protein-coding"]
[6042,"chr4",156202162,156204016,"+",0,"NA","promoter-TSS (NR_030671)","promoter-TSS (NR_030671)",-195,"NR_030671",100382,"Mm.461024","NR_030671",null,"AW011738","-","expressed sequence AW011738","ncRNA"]
[237,"chr1",92909764,92912246,"+",0,"NA","exon (NM_181405, exon 1 of 11)","exon (NM_181405, exon 1 of 11)",180,"NM_181405",108657,"Mm.200971","NM_181405","ENSMUSG00000026269","Rnpepl1","1110014H17Rik|AI894167","arginyl aminopeptidase (aminopeptidase B)-like 1","protein-coding"]
[2371,"chr14",22019546,22020155,"+",0,"NA","5' UTR (NM_028275, exon 1 of 7)","5' UTR (NM_028275, exon 1 of 7)",138,"NM_028275",76633,"Mm.489898","NM_028275","ENSMUSG00000063458","1700112E06Rik","2700009F18Rik","RIKEN cDNA 1700112E06 gene","protein-coding"]
[2519,"chr14",59597088,59598513,"+",0,"NA","exon (NM_001168535, exon 1 of 11)","exon (NM_001168535, exon 1 of 11)",159,"NM_001168537",71891,"Mm.439850","NM_027986","ENSMUSG00000021982","Cdadc1","2310010M10Rik|AI449174|AI463398|BB130816|NYD-SP15","cytidine and dCMP deaminase domain containing 1","protein-coding"]
[6958,"chr6",125008534,125010196,"+",0,"NA","promoter-TSS (NM_175557)","promoter-TSS (NM_175557)",127,"NM_001252083",269800,"Mm.108677","NM_175557","ENSMUSG00000038346","Zfp384","BB163993|C130073D16Rik|Ciz|NP|Nmp4","zinc finger protein 384","protein-coding"]
[2610,"chr14",103512313,103517290,"+",0,"NA","intron (NM_022886, intron 1 of 30)","RSINE1|SINE|B4",1460,"NM_022886",64929,"Mm.244003","NM_022886","ENSMUSG00000022123","Scel","9230114I02Rik","sciellin","protein-coding"]
[4154,"chr19",24224145,24225847,"+",0,"NA","promoter-TSS (NM_011597)","promoter-TSS (NM_011597)",30,"NM_011597",21873,"Mm.104744","NM_011597","ENSMUSG00000024812","Tjp2","ZO-2","tight junction protein 2","protein-coding"]
[3212,"chr16",70313789,70315489,"+",0,"NA","intron (NM_028803, intron 1 of 15)","intron (NM_028803, intron 1 of 15)",690,"NM_028803",74185,"Mm.396102","NM_028803","ENSMUSG00000022707","Gbe1","2310045H19Rik|2810426P10Rik|D16Ertd536e","glucan (1,4-alpha-), branching enzyme 1","protein-coding"]
[4407,"chr2",27474864,27476468,"+",0,"NA","promoter-TSS (NM_001113574)","promoter-TSS (NM_001113574)",7,"NM_001113573",67382,"Mm.28721","NM_023336","ENSMUSG00000026918","Brd3","2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3","bromodomain containing 3","protein-coding"]
[914,"chr10",127674969,127678445,"+",0,"NA","promoter-TSS (NM_001113211)","promoter-TSS (NM_001113211)",-358,"NM_173732",210035,"Mm.251075","NM_173732","ENSMUSG00000040195","Tmem194","Nemp1|Tmem194a","transmembrane protein 194","protein-coding"]
[4756,"chr2",128966783,128968445,"+",0,"NA","5' UTR (NM_178404, exon 1 of 12)","5' UTR (NM_178404, exon 1 of 12)",212,"NM_178404",78751,"Mm.26377","NM_178404","ENSMUSG00000042851","Zc3h6","4631426G04Rik|4833425H18Rik|AU024389|AW060453|Zc3hdc6|mKIAA2035","zinc finger CCCH type containing 6","protein-coding"]
[300,"chr1",132005433,132012803,"+",0,"NA","intron (NM_007923, intron 1 of 4)","intron (NM_007923, intron 1 of 4)",1513,"NM_007923",13714,"Mm.254233","NM_007923","ENSMUSG00000026436","Elk4","2310011G17Rik|A130026I01Rik|BB162516|SAP-1|Sap1","ELK4, member of ETS oncogene family","protein-coding"]
[1439,"chr11",97041590,97042001,"+",0,"NA","promoter-TSS (NM_027026)","promoter-TSS (NM_027026)",209,"NM_026154",107732,"Mm.208946","NM_026154","ENSMUSG00000001445","Mrpl10","0610040E02Rik|C78440|MRP-L8|Rpml8","mitochondrial ribosomal protein L10","protein-coding"]
[4419,"chr2",29619261,29621763,"+",0,"NA","intron (NM_054050, intron 1 of 23)","intron (NM_054050, intron 1 of 23)",792,"NM_001039086",107746,"Mm.298274","NM_054050","ENSMUSG00000039844","Rapgef1","4932418O06Rik|C3G|Grf2","Rap guanine nucleotide exchange factor (GEF) 1","protein-coding"]
[3654,"chr17",56877250,56877556,"+",0,"NA","exon (NM_030141, exon 3 of 14)","exon (NM_030141, exon 3 of 14)",1770,"NM_030141",78625,"Mm.160106","NM_030141","ENSMUSG00000024209","1700061G19Rik","1700026H02|AI507598","RIKEN cDNA 1700061G19 gene","protein-coding"]
[6330,"chr5",110652890,110653987,"+",0,"NA","promoter-TSS (NM_027156)","promoter-TSS (NM_027156)",-13,"NM_027156",69663,"Mm.5267","NM_027156","ENSMUSG00000029504","Ddx51","2310061O04Rik|AA537002|C81583|R75505","DEAD (Asp-Glu-Ala-Asp) box polypeptide 51","protein-coding"]
[1407,"chr11",94209703,94214049,"+",0,"NA","intron (NM_009427, intron 1 of 1)","CpG-2446",422,"NM_009427",22057,"Mm.259673","NM_009427","ENSMUSG00000037573","Tob1","Tob|Trob","transducer of ErbB-2.1","protein-coding"]
[3946,"chr18",74960628,74963187,"+",0,"NA","promoter-TSS (NM_010720)","promoter-TSS (NM_010720)",-644,"NM_010720",16891,"Mm.299647","NM_010720","ENSMUSG00000053846","Lipg","3110013K01Rik|EL|lipase|mEDL","lipase, endothelial","protein-coding"]
[496,"chr1",191574729,191576046,"+",0,"NA","promoter-TSS (NM_001306204)","promoter-TSS (NM_001306204)",157,"NM_001305233",76843,"Mm.189102","NM_029766","ENSMUSG00000037474","Dtl","2810047L02Rik|5730564G15Rik|Ramp","denticleless homolog (Drosophila)","protein-coding"]
[6246,"chr5",86172232,86173371,"+",0,"NA","promoter-TSS (NM_172712)","promoter-TSS (NM_172712)",-58,"NM_172712",231380,"Mm.34012","NM_172712",null,"Uba6","4930542H01|5730469D23Rik|AU021846|AW124799|E1-L2|Ube1l2","ubiquitin-like modifier activating enzyme 6","protein-coding"]
[2829,"chr15",79931132,79933288,"+",0,"NA","intron (NM_144811, intron 1 of 6)","intron (NM_144811, intron 1 of 6)",436,"NM_144811",52609,"Mm.323442","NM_144811","ENSMUSG00000053411","Cbx7","1600014J01Rik|AI851678|D15Ertd417e","chromobox 7","protein-coding"]
[5170,"chr3",89269124,89272960,"+",0,"NA","promoter-TSS (NM_009057)","promoter-TSS (NM_009057)",-472,"NM_009057",19729,"Mm.17958","NM_009057","ENSMUSG00000027953","Slc50a1","MmSWEET1|Rag1ap1|Rga","solute carrier family 50 (sugar transporter), member 1","protein-coding"]
[7738,"chr8",3676539,3677539,"+",0,"NA","intron (NM_025701, intron 1 of 1)","intron (NM_025701, intron 1 of 1)",562,"NM_025701",66682,"Mm.29090","NM_025701",null,"Trappc5","4021401A16Rik|TRS31","trafficking protein particle complex 5","protein-coding"]
[605,"chr10",41489260,41491026,"+",0,"NA","promoter-TSS (NM_028430)","promoter-TSS (NM_028430)",197,"NM_009213",20598,"Mm.953","NM_009213","ENSMUSG00000019822","Smpd2","AW108287|nSMase|nSMase1","sphingomyelin phosphodiesterase 2, neutral","protein-coding"]
[2987,"chr16",4077116,4078757,"+",0,"NA","promoter-TSS (NM_026508)","promoter-TSS (NM_026508)",-126,"NM_026508",68015,"Mm.123366","NM_026508","ENSMUSG00000005981","Trap1","2410002K23Rik|HSP75","TNF receptor-associated protein 1","protein-coding"]
[4855,"chr2",154436580,154437191,"+",0,"NA","intron (NM_001285446, intron 1 of 10)","CpG",401,"NM_009823",12396,"Mm.29914","NM_009823","ENSMUSG00000038533","Cbfa2t2","A430091M07|C330013D05Rik|Cbfa2t2h|MTGR1","core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)","protein-coding"]
[1699,"chr11",121236148,121238137,"+",0,"NA","promoter-TSS (NM_026272)","promoter-TSS (NM_026272)",-94,"NM_026272",67608,"Mm.291832","NM_026272","ENSMUSG00000000056","Narf","4430402O11Rik","nuclear prelamin A recognition factor","protein-coding"]
[1228,"chr11",69845871,69848849,"+",0,"NA","exon (NM_023564, exon 3 of 8)","exon (NM_023564, exon 3 of 8)",716,"NR_033133",70310,"Mm.28874","NM_023564","ENSMUSG00000019461","Plscr3","2210403O21Rik|2610037N06Rik|ESTM3|X83310","phospholipid scramblase 3","protein-coding"]
[6117,"chr5",31219973,31221478,"+",0,"NA","promoter-TSS (NM_008014)","promoter-TSS (NM_008014)",-180,"NM_008014",14208,"Mm.14501","NM_008014","ENSMUSG00000029147","Ppm1g","AI385652|Fin13","protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform","protein-coding"]
[5788,"chr4",126967838,126968572,"+",0,"NA","promoter-TSS (NM_001114399)","promoter-TSS (NM_001114399)",-282,"NM_001114399",67785,"Mm.165401","NM_001114399","ENSMUSG00000042446","Zmym4","6330503C17Rik|AI480785|AW493829|CDIR|D630001M21|MYM|Zfp262|Znf262|mKIAA0425","zinc finger, MYM-type 4","protein-coding"]
[5917,"chr4",138325797,138326276,"+",0,"NA","exon (NM_026880, exon 1 of 8)","exon (NM_026880, exon 1 of 8)",260,"NM_026880",68943,"Mm.18539","NM_026880","ENSMUSG00000028756","Pink1","1190006F07Rik|AU042772|AW557854|BRPK|mFLJ00387","PTEN induced putative kinase 1","protein-coding"]
[694,"chr10",75060093,75061239,"+",0,"NA","promoter-TSS (NM_001081412)","promoter-TSS (NM_001081412)",-230,"NM_001081412",110279,"Mm.333722","NM_001081412","ENSMUSG00000009681","Bcr","5133400C09Rik|AI561783|AI853148|mKIAA3017","breakpoint cluster region","protein-coding"]
[5426,"chr4",4075569,4077513,"+",0,"NA","intron (NM_001080710, intron 2 of 6)","intron (NM_001080710, intron 2 of 6)",973,"NM_001080710",242286,"Mm.298546","NM_001080710",null,"Sdr16c6","4833413O15Rik|Gm423","short chain dehydrogenase/reductase family 16C, member 6","protein-coding"]
[5371,"chr3",135688107,135692068,"+",0,"NA","intron (NM_008689, intron 1 of 24)","intron (NM_008689, intron 1 of 24)",1460,"NM_008689",18033,"Mm.256765","NM_008689","ENSMUSG00000028163","Nfkb1","NF-KB1|NF-kappaB|NF-kappaB1|p105|p50|p50/p105","nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105","protein-coding"]
[4444,"chr2",30901108,30903222,"+",0,"NA","intron (NM_022415, intron 1 of 2)","intron (NM_022415, intron 1 of 2)",1132,"NM_022415",64292,"Mm.28768","NM_022415","ENSMUSG00000050737","Ptges","2410099E23Rik|D2Ertd369e|Pges|mPGES|mPGES-1","prostaglandin E synthase","protein-coding"]
[3788,"chr18",21001169,21002816,"+",0,"NA","promoter-TSS (NM_001303011)","promoter-TSS (NM_001303011)",35,"NM_207623",56515,"Mm.253542","NM_019706","ENSMUSG00000024317","Rnf138","2410015A17Rik|2810480D20Rik|STRIN|Trif|Trif-d","ring finger protein 138","protein-coding"]
[3148,"chr16",36067807,36072733,"+",0,"NA","intron (NM_027342, intron 1 of 4)","intron (NM_027342, intron 1 of 4)",1245,"NM_027342",70186,"Mm.212991","NM_027342","ENSMUSG00000003955","Fam162a","2310056P07Rik|HGTD-P","family with sequence similarity 162, member A","protein-coding"]
[2244,"chr13",81708548,81712521,"+",0,"NA","promoter-TSS (NM_028372)","promoter-TSS (NM_028372)",479,"NM_001081176",67486,"Mm.279781","NM_001081176","ENSMUSG00000035834","Polr3g","2310047G20Rik|AV275904|RPC32|RPC7","polymerase (RNA) III (DNA directed) polypeptide G","protein-coding"]
[7201,"chr7",28823513,28826630,"+",0,"NA","promoter-TSS (NM_016772)","promoter-TSS (NM_016772)",-267,"NM_016772",51798,"Mm.291776","NM_016772","ENSMUSG00000053898","Ech1","AA617331","enoyl coenzyme A hydratase 1, peroxisomal","protein-coding"]
[7064,"chr7",6362009,6363840,"+",0,"NA","promoter-TSS (NM_001025163)","promoter-TSS (NM_001025163)",-384,"NM_001025163",330463,"Mm.136456","NM_177888",null,"Zfp78","A330079D15|KRAB12|Zfp77","zinc finger protein 78","protein-coding"]
[8174,"chr8",119604661,119605046,"+",0,"NA","intron (NM_021441, intron 1 of 14)","intron (NM_021441, intron 1 of 14)",387,"NM_021441",21341,"Mm.41977","NM_021441","ENSMUSG00000031832","Taf1c","Tafi95|mTAFI95","TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C","protein-coding"]
[3999,"chr19",4214541,4215389,"+",0,"NA","intron (NM_001310039, intron 1 of 2)","CpG",576,"NM_001310039",56708,"Mm.347919","NM_019952",null,"Clcf1","BSF-3|Bsf3|CLC|NNT-1","cardiotrophin-like cytokine factor 1","protein-coding"]
[4327,"chr2",10048085,10049439,"+",0,"NA","promoter-TSS (NM_027748)","promoter-TSS (NM_027748)",-153,"NM_027748",209361,"Mm.86343","NM_027748","ENSMUSG00000025782","Taf3","140kDa|4933439M23Rik|AW539625|TAF140|TAFII-140|TAFII140|mTAFII140","TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor","protein-coding"]
[6079,"chr5",24100154,24101624,"+",0,"NA","intron (NM_026448, intron 1 of 10)","CpG",299,"NM_001161800",52323,"Mm.273768","NM_026448","ENSMUSG00000028986","Klhl7","2700038B03Rik|D5Ertd363e|SBBI26","kelch-like 7","protein-coding"]
[7650,"chr7",131361286,131364340,"+",0,"NA","promoter-TSS (NM_026655)","promoter-TSS (NM_026655)",-115,"NM_026655",68277,"Mm.121122","NM_026655","ENSMUSG00000040177","2310057M21Rik","3110040E10Rik|AI429544","RIKEN cDNA 2310057M21 gene","protein-coding"]
[7313,"chr7",45573483,45575661,"+",0,"NA","intron (NR_038165, intron 2 of 3)","intron (NR_038165, intron 2 of 3)",604,"NR_038166",71661,"Mm.439894","NR_038165","ENSMUSG00000085214","0610005C13Rik","AI182092","RIKEN cDNA 0610005C13 gene","ncRNA"]
[8320,"chr9",31029452,31031490,"+",0,"NA","promoter-TSS (NM_172765)","promoter-TSS (NM_172765)",-173,"NM_001115130",235132,"Mm.239355","NM_172765","ENSMUSG00000047412","Zbtb44","6030404E16Rik|Btbd15|E230011F09","zinc finger and BTB domain containing 44","protein-coding"]
[3201,"chr16",58727002,58728889,"+",0,"NA","promoter-TSS (NM_001252451)","promoter-TSS (NM_001252451)",35,"NM_001252451",224250,"Mm.29482","NM_171826","ENSMUSG00000022744","Cldnd1","1110019C08Rik|AA407103|AI849195|AW489850|Cldn25","claudin domain containing 1","protein-coding"]
[3257,"chr16",93607898,93608374,"+",0,"NA","exon (NM_007620, exon 1 of 3)","exon (NM_007620, exon 1 of 3)",299,"NM_007620",12408,"Mm.26940","NM_007620","ENSMUSG00000051483","Cbr1","AW261796|CR|Cbr","carbonyl reductase 1","protein-coding"]
[6572,"chr5",143328693,143329936,"+",0,"NA","promoter-TSS (NR_027874)","promoter-TSS (NR_027874)",6,"NR_027874",67672,"Mm.30983","NR_027874","ENSMUSG00000089889","0610040B10Rik","-","RIKEN cDNA 0610040B10 gene","ncRNA"]
[5303,"chr3",108017168,108018465,"+",0,"NA","5' UTR (NM_010358, exon 1 of 8)","5' UTR (NM_010358, exon 1 of 8)",157,"NM_010358",14862,"Mm.37199","NM_010358","ENSMUSG00000058135","Gstm1","Gstb-1|Gstb1","glutathione S-transferase, mu 1","protein-coding"]
[7306,"chr7",45413350,45414235,"+",0,"NA","promoter-TSS (NM_198190)","promoter-TSS (NM_198190)",97,"NM_198190",78405,"Mm.20344","NM_198190","ENSMUSG00000074121","Ntf5","2900040K06Rik|AI462899|NT-4|NT-5|NT4|NT4/5|Ntf-5|Ntf4","neurotrophin 5","protein-coding"]
[3621,"chr17",51178488,51179743,"+",0,"NA","5' UTR (NM_001285991, exon 1 of 23)","5' UTR (NM_001285991, exon 1 of 23)",237,"NM_028162",72238,"Mm.120650","NM_028162","ENSMUSG00000023923","Tbc1d5","1600014N05Rik","TBC1 domain family, member 5","protein-coding"]
[8278,"chr9",21015403,21016742,"+",0,"NA","exon (NM_010493, exon 1 of 7)","exon (NM_010493, exon 1 of 7)",112,"NM_010493",15894,"Mm.435508","NM_010493","ENSMUSG00000037405","Icam1","CD54|Icam-1|Ly-47|MALA-2","intercellular adhesion molecule 1","protein-coding"]
[2726,"chr15",58322350,58326801,"+",0,"NA","promoter-TSS (NM_177755)","promoter-TSS (NM_177755)",-406,"NM_177755",268807,"Mm.124498","NM_177755","ENSMUSG00000022357","Klhl38","8230402K04Rik","kelch-like 38","protein-coding"]
[7193,"chr7",28371918,28383808,"+",0,"NA","exon (NM_011756, exon 2 of 2)","exon (NM_011756, exon 2 of 2)",1365,"NM_011756",22695,"Mm.389856","NM_011756","ENSMUSG00000044786","Zfp36","Gos24|Nup475|TIS11D|TISII|Tis11|Ttp|Zfp-36","zinc finger protein 36","protein-coding"]
[441,"chr1",177442538,177443294,"+",0,"NA","Intergenic","G-rich|Low_complexity|Low_complexity",-1745,"NM_001012330",30928,"Mm.330700","NM_013915","ENSMUSG00000063659","Zbtb18","RP58|Zfp238|Znf238","zinc finger and BTB domain containing 18","protein-coding"]
[8865,"chrX",74305035,74305230,"+",0,"NA","TTS (NM_018794)","TTS (NM_018794)",120,"NM_010273",14567,"Mm.205830","NM_010273","ENSMUSG00000015291","Gdi1","GDIA|GDIalpha","guanosine diphosphate (GDP) dissociation inhibitor 1","protein-coding"]
[6182,"chr5",48372008,48372604,"+",0,"NA","promoter-TSS (NM_025755)","promoter-TSS (NM_025755)",-86,"NM_025755",66768,"Mm.29409","NM_025755","ENSMUSG00000029089","Pacrgl","4933428G09Rik","PARK2 co-regulated-like","protein-coding"]
[7430,"chr7",89940749,89941485,"+",0,"NA","promoter-TSS (NM_001291289)","promoter-TSS (NM_001291289)",87,"NM_001291289",67669,"Mm.28679","NM_026304",null,"l7Rn6","0610007P06Rik|1110002N09Rik|Hikeshi|l(7)6Rn","lethal, Chr 7, Rinchik 6","protein-coding"]
[7047,"chr7",4684306,4685132,"+",0,"NA","intron (NM_024172, intron 1 of 7)","intron (NM_024172, intron 1 of 7)",244,"NM_024172",66245,"Mm.6803","NM_024172","ENSMUSG00000063802","Hspbp1","1500019G21Rik","HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1","protein-coding"]
[4041,"chr19",5688070,5692776,"+",0,"NA","exon (NM_022012, exon 3 of 12)","exon (NM_022012, exon 3 of 12)",1292,"NM_022012",26403,"Mm.185026","NM_022012","ENSMUSG00000004054","Map3k11","2610017K16Rik|Mlk3|PTK1|SPRK","mitogen-activated protein kinase kinase kinase 11","protein-coding"]
[672,"chr10",62980402,62980697,"+",0,"NA","intron (NM_027425, intron 1 of 17)","CpG",326,"NM_027425",70432,"Mm.234587","NM_027425","ENSMUSG00000020070","Rufy2","2610111M19Rik|AI844453|Denn|LZ-FYVE|ZFYVE13","RUN and FYVE domain-containing 2","protein-coding"]
[8575,"chr9",95511082,95513155,"+",0,"NA","promoter-TSS (NM_001114977)","promoter-TSS (NM_001114977)",-122,"NM_001114977",67958,"Mm.292742","NM_026476","ENSMUSG00000032407","U2surp","2610101N10Rik|AU023006|Sr140","U2 snRNP-associated SURP domain containing","protein-coding"]
[7644,"chr7",130519120,130520289,"+",0,"NA","promoter-TSS (NM_001136054)","promoter-TSS (NM_001136054)",-124,"NM_013799",11907,"Mm.216321","NM_013799","ENSMUSG00000030850","Ate1","AI225793|AW547406","arginyltransferase 1","protein-coding"]
[4257,"chr19",46303068,46306889,"+",0,"NA","promoter-TSS (NM_019408)","promoter-TSS (NM_019408)",241,"NM_001177369",18034,"Mm.102365","NM_019408","ENSMUSG00000025225","Nfkb2","NF-kappaB2|lyt|p49|p49/p100|p50B|p52","nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100","protein-coding"]
[3806,"chr18",31804130,31805833,"+",0,"NA","intron (NM_001170970, intron 1 of 7)","intron (NM_001170970, intron 1 of 7)",924,"NM_001170966",74320,"Mm.277705","NM_028866","ENSMUSG00000024400","Wdr33","1110001N06Rik|2310011G05Rik|2810021O11Rik|8430413N20Rik|WDC146","WD repeat domain 33","protein-coding"]
[3689,"chr17",71639995,71640187,"+",0,"NA","promoter-TSS (NR_028551)","promoter-TSS (NR_028551)",-798,"NR_028551",100217456,null,"NR_028551","ENSMUSG00000092887","Snord53","MBII-35","small nucleolar RNA, C/D box 53","snoRNA"]
[5858,"chr4",133497624,133498444,"+",0,"NA","exon (NM_001081156, exon 1 of 2)","exon (NM_001081156, exon 1 of 2)",516,"NM_001081156",69539,"Mm.151594","NM_001081156","ENSMUSG00000056596","Trnp1","2300002D11Rik|Trnp","TMF1-regulated nuclear protein 1","protein-coding"]
[5391,"chr3",142880797,142883026,"+",0,"NA","promoter-TSS (NM_178654)","promoter-TSS (NM_178654)",93,"NM_178654",109333,"Mm.244236","NM_178654","ENSMUSG00000004591","Pkn2","6030436C20Rik|AI507382|PRK2|Prkcl2|Stk7","protein kinase N2","protein-coding"]
[751,"chr10",80260521,80262048,"+",0,"NA","promoter-TSS (NM_010255)","promoter-TSS (NM_010255)",-316,"NM_010255",14431,"Mm.7329","NM_010255","ENSMUSG00000020150","Gamt","AA571402|Spintz1","guanidinoacetate methyltransferase","protein-coding"]
[1746,"chr12",24830975,24832791,"+",0,"NA","intron (NM_001083341, intron 1 of 11)","CpG",284,"NM_001083341",67216,"Mm.167671","NM_026037","ENSMUSG00000020646","Mboat2","2810049G06Rik|AU022889|AW547221|LPCAT4|Moact2|Oact2","membrane bound O-acyltransferase domain containing 2","protein-coding"]
[8580,"chr9",96477480,96479642,"+",0,"NA","exon (NM_001311135, exon 1 of 3)","exon (NM_001311135, exon 1 of 3)",114,"NM_011279",19823,"Mm.28235","NM_011279","ENSMUSG00000051234","Rnf7","Rbx2|SAG","ring finger protein 7","protein-coding"]
[7224,"chr7",30280091,30281202,"+",0,"NA","promoter-TSS (NM_146186)","promoter-TSS (NM_146186)",-225,"NM_146186",233064,"Mm.271677","NM_146186","ENSMUSG00000037020","Wdr62","2310038K02Rik","WD repeat domain 62","protein-coding"]
[4551,"chr2",71211409,71212526,"+",0,"NA","promoter-TSS (NM_001198878)","promoter-TSS (NM_001198878)",21,"NM_010064",13427,"Mm.249479","NM_010064","ENSMUSG00000027012","Dync1i2","3110079H08Rik|AW554389|Dncic2","dynein cytoplasmic 1 intermediate chain 2","protein-coding"]
[4300,"chr19",60226017,60226653,"+",0,"NA","5' UTR (NM_029648, exon 1 of 8)","5' UTR (NM_029648, exon 1 of 8)",362,"NM_029648",76539,"Mm.290183","NM_029648","ENSMUSG00000057858","Fam204a","2310065H12Rik|2610015K05Rik|D19Ertd737e","family with sequence similarity 204, member A","protein-coding"]
[3356,"chr17",24478818,24479384,"+",0,"NA","promoter-TSS (NM_001252464)","promoter-TSS (NM_001252464)",-23,"NM_019988",56716,"Mm.289516","NM_019988","ENSMUSG00000024142","Mlst8","0610033N12Rik|AA409454|AI505104|AI851821|Gbl","MTOR associated protein, LST8 homolog (S. cerevisiae)","protein-coding"]
[2275,"chr13",97137573,97138455,"+",0,"NA","promoter-TSS (NM_001146043)","promoter-TSS (NM_001146043)",77,"NM_001271464",320806,"Mm.219675","NM_177266","ENSMUSG00000021666","Gfm2","6530419G12Rik|A930009M04Rik|EF-G2mt|EFG2|MST027|RRF2mt","G elongation factor, mitochondrial 2","protein-coding"]
[5532,"chr4",45341462,45343149,"+",0,"NA","exon (NM_153167, exon 1 of 7)","exon (NM_153167, exon 1 of 7)",204,"NM_153167",242418,"Mm.317668","NM_153167","ENSMUSG00000035572","Dcaf10","AA959934|Wdr32","DDB1 and CUL4 associated factor 10","protein-coding"]
[907,"chr10",127288369,127292344,"+",0,"NA","promoter-TSS (NM_007837)","promoter-TSS (NM_007837)",-437,"NM_007837",13198,"Mm.110220","NM_007837","ENSMUSG00000025408","Ddit3","CHOP-10|CHOP10|chop|gadd153","DNA-damage inducible transcript 3","protein-coding"]
[5925,"chr4",139310363,139311080,"+",0,"NA","promoter-TSS (NM_025337)","promoter-TSS (NM_025337)",-21,"NM_145384",212555,"Mm.45131","NM_145384","ENSMUSG00000028744","Pqlc2","BC019216","PQ loop repeat containing 2","protein-coding"]
[7257,"chr7",35396287,35397241,"+",0,"NA","promoter-TSS (NM_028120)","promoter-TSS (NM_028120)",3,"NM_178643",101831,"Mm.389855","NM_178643","ENSMUSG00000030493","Faap24","AW124591|AW538696|C230052I12Rik","Fanconi anemia core complex associated protein 24","protein-coding"]
[1868,"chr12",80258700,80261152,"+",0,"NA","intron (NM_134156, intron 1 of 20)","CpG",445,"NM_134156",109711,"Mm.253564","NM_134156","ENSMUSG00000015143","Actn1","3110023F10Rik|Actn1a","actinin, alpha 1","protein-coding"]
[3480,"chr17",33780898,33782063,"+",0,"NA","promoter-TSS (NM_020581)","promoter-TSS (NM_020581)",95,"NM_020581",57875,"Mm.196189","NM_020581",null,"Angptl4","Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158","angiopoietin-like 4","protein-coding"]
[6925,"chr6",119413500,119417518,"+",0,"NA","intron (NM_197985, intron 1 of 7)","MTD|LTR|ERVL-MaLR",1974,"NM_197985",68465,"Mm.291826","NM_197985","ENSMUSG00000030168","Adipor2","1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2","adiponectin receptor 2","protein-coding"]
[3154,"chr16",37539207,37540569,"+",0,"NA","promoter-TSS (NM_028812)","promoter-TSS (NM_028812)",-6,"NM_001042499",67657,"Mm.28158","NM_026297","ENSMUSG00000022827","Rabl3","4930553C05Rik|AA958834","RAB, member RAS oncogene family-like 3","protein-coding"]
[5812,"chr4",129556306,129556875,"+",0,"NA","intron (NM_001162433, intron 6 of 12)","intron (NM_001162433, intron 6 of 12)",1221,"NR_106199",102465997,null,"NR_106199","ENSMUSG00000099070","Mir8119","Gm27567|mmu-mir-8119","microRNA 8119","ncRNA"]
[8914,"chrX",106011104,106012454,"+",0,"NA","exon (NM_025952, exon 1 of 11)","exon (NM_025952, exon 1 of 11)",120,"NM_001190409",67075,"Mm.275943","NM_025952","ENSMUSG00000031232","Magt1","2410001C15Rik|2610529C04Rik|2810482I07Rik|IAG2|IAP","magnesium transporter 1","protein-coding"]
[8725,"chr9",120577377,120577801,"+",0,"NA","non-coding (NR_073359, exon 1 of 1)","non-coding (NR_073359, exon 1 of 1)",258,"NR_073359",76100,"Mm.48212","NR_073359","ENSMUSG00000052658","5830454E08Rik","-","RIKEN cDNA 5830454E08 gene","ncRNA"]
[664,"chr10",62108825,62111446,"+",0,"NA","intron (NM_027251, intron 2 of 3)","intron (NM_027251, intron 2 of 3)",878,"NM_027251",69894,"Mm.294126","NM_027251","ENSMUSG00000020083","2010107G23Rik","AA545165","RIKEN cDNA 2010107G23 gene","protein-coding"]
[5639,"chr4",103214395,103215564,"+",0,"NA","promoter-TSS (NM_177732)","promoter-TSS (NM_177732)",-95,"NM_177732",242585,"Mm.281800","NM_177732",null,"Slc35d1","AI834976|C330011J09|UGTREL7|mKIAA0260","solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1","protein-coding"]
[1790,"chr12",54984252,54987463,"+",0,"NA","intron (NM_013815, intron 1 of 26)","CpG-3178",479,"NM_013815",217578,"Mm.479583","NM_013815","ENSMUSG00000035021","Baz1a","Acf1|B930060C03|BC065123|Gtl5|Wcrf180|cbp146","bromodomain adjacent to zinc finger domain 1A","protein-coding"]
[2264,"chr13",94358326,94359297,"+",0,"NA","promoter-TSS (NM_009680)","promoter-TSS (NM_009680)",112,"NR_045619",328309,"Mm.174191","NM_183205",null,"Gm9776","A530089L17|ENSMUSG00000042857","predicted gene 9776","ncRNA"]
[8738,"chr9",122571291,122573037,"+",0,"NA","promoter-TSS (NR_015610)","promoter-TSS (NR_015610)",-337,"NR_015610",319626,"Mm.186748","NR_015610","ENSMUSG00000097736","9530059O14Rik","-","RIKEN cDNA 9530059O14 gene","ncRNA"]
[6920,"chr6",118138143,118139144,"+",0,"NA","intron (NM_030165, intron 1 of 7)","intron (NM_030165, intron 1 of 7)",497,"NM_030165",78752,"Mm.300317","NM_030165","ENSMUSG00000042042","Csgalnact2","4632415D10Rik|Galnact2","chondroitin sulfate N-acetylgalactosaminyltransferase 2","protein-coding"]
[1420,"chr11",95712300,95713520,"+",0,"NA","promoter-TSS (NR_045780)","promoter-TSS (NR_045780)",-156,"NR_045780",432396,"Mm.426849","NR_045780","ENSMUSG00000086191","Zfp652os","1110035M17Rik","zinc finger protein 652, opposite strand","ncRNA"]
[3437,"chr17",29078604,29078852,"+",0,"NA","intron (NR_036469, intron 1 of 1)","ID_B1|SINE|B4",398,"NR_036469",100504267,"Mm.438550","NR_036469","ENSMUSG00000085912","Trp53cor1","Gm16197|OTTMUSG00000031656|linc-p21|lincRNA-p21","tumor protein p53 pathway corepressor 1","ncRNA"]
[2502,"chr14",56575195,56576492,"+",0,"NA","intron (NM_001145978, intron 1 of 34)","intron (NM_001145978, intron 1 of 34)",224,"NM_001145978",328417,"Mm.379357","NM_001145978","ENSMUSG00000054509","Parp4","Adprtl1|C030027K23Rik|E230037B21Rik|Gm743|PARPL|PH5P|VAULT3|VPARP|p193","poly (ADP-ribose) polymerase family, member 4","protein-coding"]
[126,"chr1",59236865,59238027,"+",0,"NA","promoter-TSS (NM_001159948)","promoter-TSS (NM_001159948)",-215,"NM_146109",74018,"Mm.272078","NM_028717","ENSMUSG00000026024","Als2","3222402C23Rik|9430073A21Rik|Als2cr6|Alsin|mKIAA1563","amyotrophic lateral sclerosis 2 (juvenile)","protein-coding"]
[6314,"chr5",108433488,108435384,"+",0,"NA","promoter-TSS (NM_007507)","promoter-TSS (NM_007507)",-58,"NM_007507",11958,"Mm.136093","NM_007507",null,"Atp5k","2610008D24Rik|Atp5i|Lfm1","ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit E","protein-coding"]
[2875,"chr15",85700839,85706962,"+",0,"NA","non-coding (NR_110483, exon 1 of 2)","non-coding (NR_110483, exon 1 of 2)",127,"NR_110483",102800312,"Mm.33117","NR_110483",null,"Lincppara","Mirlet7bhg|linc-Ppara","long intergenic noncoding RNA near Ppara","ncRNA"]
[5819,"chr4",129741478,129743145,"+",0,"NA","promoter-TSS (NM_011317)","promoter-TSS (NM_011317)",-8,"NR_045036",20218,"Mm.8256","NM_011317","ENSMUSG00000028790","Khdrbs1","Sam68|p62|p68","KH domain containing, RNA binding, signal transduction associated 1","protein-coding"]
[1533,"chr11",102430017,102432595,"+",0,"NA","intron (NM_008175, intron 1 of 12)","intron (NM_008175, intron 1 of 12)",984,"NM_008175",14824,"Mm.1568","NM_008175","ENSMUSG00000034708","Grn","Pgrn|epithelin","granulin","protein-coding"]
[7979,"chr8",83592138,83595069,"+",0,"NA","intron (NM_134118, intron 1 of 12)","intron (NM_134118, intron 1 of 12)",888,"NM_027179",106529,"Mm.352239","NM_027179","ENSMUSG00000031708","Tecr","2410016D23Rik|A230102P12Rik|AI173355|D17Ertd178e|Gpsn2|SC2","trans-2,3-enoyl-CoA reductase","protein-coding"]
[651,"chr10",60217663,60219471,"+",0,"NA","intron (NM_016803, intron 1 of 3)","intron (NM_016803, intron 1 of 3)",693,"NM_016803",53374,"Mm.12866","NM_016803","ENSMUSG00000057337","Chst3","C6ST|C6ST-1|GST-0","carbohydrate (chondroitin 6/keratan) sulfotransferase 3","protein-coding"]
[176,"chr1",75167426,75169347,"+",0,"NA","promoter-TSS (NM_026846)","promoter-TSS (NM_026846)",-260,"NM_001159905",68818,"Mm.32646","NM_026846","ENSMUSG00000026197","Zfand2b","1110060O18Rik|C81256","zinc finger, AN1 type domain 2B","protein-coding"]
[4660,"chr2",112379173,112380762,"+",0,"NA","intron (NM_024254, intron 1 of 9)","intron (NM_024254, intron 1 of 9)",756,"NM_024254",72425,"Mm.425091","NM_024254","ENSMUSG00000027132","Katnbl1","2410042D21Rik|AA166487|AA473307|AI467442","katanin p80 subunit B like 1","protein-coding"]
[256,"chr1",106171017,106173325,"+",0,"NA","promoter-TSS (NR_040630)","promoter-TSS (NR_040630)",302,"NM_133821",98432,"Mm.24115","NM_133821","ENSMUSG00000044340","Phlpp1","AI836256|Phlpp|Plekhe1|SCOP|mKIAA0606","PH domain and leucine rich repeat protein phosphatase 1","protein-coding"]
[7613,"chr7",127393091,127394110,"+",0,"NA","promoter-TSS (NM_198011)","promoter-TSS (NM_198011)",21,"NM_198011",101604,"Mm.334241","NM_198011",null,"E430018J23Rik","AI480612","RIKEN cDNA E430018J23 gene","protein-coding"]
[2810,"chr15",78873859,78878262,"+",0,"NA","Intergenic","B1_Mus1|SINE|Alu",-1130,"NM_145929",106039,"Mm.251331","NM_145929","ENSMUSG00000033128","Gga1","4930406E12Rik|AU016030|AW209092","golgi associated, gamma adaptin ear containing, ARF binding protein 1","protein-coding"]
[6704,"chr6",39810396,39811424,"+",0,"NA","promoter-TSS (NM_001010930)","promoter-TSS (NM_001010930)",26,"NM_010270",14548,"Mm.377071","NM_010270","ENSMUSG00000029918","Mrps33","AI841153|CGI-139|Gdap3|MRP-S33|PTD003","mitochondrial ribosomal protein S33","protein-coding"]
[4840,"chr2",152396688,152399425,"+",0,"NA","promoter-TSS (NM_011438)","promoter-TSS (NM_011438)",-10,"NM_011438",20667,"Mm.28424","NM_011438","ENSMUSG00000051817","Sox12","2010205A02Rik","SRY (sex determining region Y)-box 12","protein-coding"]
[4545,"chr2",69861035,69862575,"+",0,"NA","intron (NM_009278, intron 1 of 11)","CpG",243,"NM_009278",20823,"Mm.10508","NM_009278","ENSMUSG00000068882","Ssb","SS-B","Sjogren syndrome antigen B","protein-coding"]
[4344,"chr2",18027647,18029108,"+",0,"NA","non-coding (NR_028378, exon 1 of 1)","non-coding (NR_028378, exon 1 of 1)",1128,"NR_028378",100034739,"Mm.401643","NR_028378",null,"Gm17762","-","predicted gene, 17762","ncRNA"]
[5273,"chr3",101603181,101605099,"+",0,"NA","intron (NM_144900, intron 1 of 22)","CpG",567,"NM_144900",11928,"Mm.193670","NM_144900","ENSMUSG00000033161","Atp1a1","Atpa-1|BC010319","ATPase, Na+/K+ transporting, alpha 1 polypeptide","protein-coding"]
[6542,"chr5",139214755,139215975,"+",0,"NA","intron (NM_024451, intron 2 of 22)","intron (NM_024451, intron 2 of 22)",207,"NM_001256116",77053,"Mm.210845","NM_024451","ENSMUSG00000036817","Sun1","4632417G13Rik|5730434D03Rik|Unc84a|mKIAA0810","Sad1 and UNC84 domain containing 1","protein-coding"]
[1221,"chr11",69681156,69683248,"+",0,"NA","promoter-TSS (NM_030702)","promoter-TSS (NM_030702)",-118,"NM_001163571",80886,"Mm.284592","NM_030702","ENSMUSG00000005204","Senp3","AA408656|Smt3ip|Smt3ip1","SUMO/sentrin specific peptidase 3","protein-coding"]
[6135,"chr5",33334868,33337382,"+",0,"NA","intron (NM_021500, intron 1 of 8)","CpG",553,"NM_021500",59003,"Mm.138617","NM_021500","ENSMUSG00000079562","Maea","1110030D19Rik|EMP|Gid9","macrophage erythroblast attacher","protein-coding"]
[1200,"chr11",65805502,65808000,"+",0,"NA","promoter-TSS (NM_001302375)","promoter-TSS (NM_001302375)",-424,"NM_001302374",52712,"Mm.340052","NM_026107","ENSMUSG00000018347","Zkscan6","1700128E15Rik|D11Ertd714e|KOX11|Zfp535|Znf18","zinc finger with KRAB and SCAN domains 6","protein-coding"]
[1757,"chr12",31634083,31635082,"+",0,"NA","promoter-TSS (NM_001164090)","promoter-TSS (NM_001164090)",15,"NM_007530",12033,"Mm.242379","NM_007530","ENSMUSG00000020650","Bcap29","AW208404|Bap29","B cell receptor associated protein 29","protein-coding"]
[4193,"chr19",36083225,36084295,"+",0,"NA","promoter-TSS (NM_019428)","promoter-TSS (NM_019428)",44,"NM_019428",54364,"Mm.277891","NM_019428","ENSMUSG00000024800","Rpp30","Rnasep2|TSG15","ribonuclease P/MRP 30 subunit","protein-coding"]
[918,"chr10",128082073,128084266,"+",0,"NA","promoter-TSS (NM_016774)","promoter-TSS (NM_016774)",-138,"NM_016774",11947,"Mm.238973","NM_016774","ENSMUSG00000025393","Atp5b","-","ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit","protein-coding"]
[8406,"chr9",53609373,53610311,"+",0,"NA","intron (NM_144784, intron 1 of 11)","B1_Mus2|SINE|Alu",508,"NM_144784",110446,"Mm.293233","NM_144784","ENSMUSG00000032047","Acat1","6330585C21Rik|Acat","acetyl-Coenzyme A acetyltransferase 1","protein-coding"]
[1413,"chr11",94653781,94654337,"+",0,"NA","promoter-TSS (NM_177752)","promoter-TSS (NM_177752)",268,"NM_053161",94064,"Mm.34951","NM_053161","ENSMUSG00000024414","Mrpl27","A630055F16Rik|D11Moh47|D18Ertd643e","mitochondrial ribosomal protein L27","protein-coding"]
[7539,"chr7",116092787,116093976,"+",0,"NA","promoter-TSS (NM_019772)","promoter-TSS (NM_019772)",1,"NM_019772",56372,"Mm.24231","NM_019772","ENSMUSG00000030663","1110004F10Rik","Smacp|Smap|sid2057|sid2057p","RIKEN cDNA 1110004F10 gene","protein-coding"]
[7326,"chr7",45920857,45921066,"+",0,"NA","promoter-TSS (NM_001146346)","promoter-TSS (NM_001146346)",-112,"NM_001146346",13732,"Mm.20829","NM_010129","ENSMUSG00000040212","Emp3","H-4|H4|HNMP-1|MI-35|Ymp","epithelial membrane protein 3","protein-coding"]
[2107,"chr13",43398360,43398996,"+",0,"NA","intron (NM_023554, intron 1 of 7)","CpG",302,"NM_023554",70078,"Mm.439927","NM_023554","ENSMUSG00000063200","Nol7","2210008F15Rik|5730556I21Rik|NOP27|RARG-1","nucleolar protein 7","protein-coding"]
[6960,"chr6",125067088,125070180,"+",0,"NA","intron (NM_001163269, intron 1 of 1)","intron (NM_001163269, intron 1 of 1)",714,"NM_001163269",381810,"Mm.333386","NM_001163268","ENSMUSG00000067714","Lpar5","GPR93|Gm1072|Gpr92|LPA5","lysophosphatidic acid receptor 5","protein-coding"]
[1598,"chr11",113750168,113752623,"+",0,"NA","promoter-TSS (NM_020006)","promoter-TSS (NM_020006)",-235,"NM_020006",56699,"Mm.293378","NM_020006","ENSMUSG00000041598","Cdc42ep4","1500041M20Rik|Borg4|CEP4","CDC42 effector protein (Rho GTPase binding) 4","protein-coding"]
[3453,"chr17",31519716,31520725,"+",0,"NA","exon (NM_001083891, exon 1 of 3)","exon (NM_001083891, exon 1 of 3)",105,"NM_001083891",78330,"Mm.28349","NM_030087","ENSMUSG00000024038","Ndufv3","1500032D16Rik","NADH dehydrogenase (ubiquinone) flavoprotein 3","protein-coding"]
[1856,"chr12",77238220,77240621,"+",0,"NA","intron (NR_045554, intron 1 of 11)","CpG",681,"NR_045554",53618,"Mm.35628","NM_016893","ENSMUSG00000021065","Fut8","-","fucosyltransferase 8","protein-coding"]
[1491,"chr11",100545233,100546209,"+",0,"NA","promoter-TSS (NM_028918)","promoter-TSS (NM_028918)",89,"NM_028918",74407,"Mm.31590","NM_028918","ENSMUSG00000006784","Ttc25","4933404O19Rik","tetratricopeptide repeat domain 25","protein-coding"]
[1804,"chr12",65035845,65037598,"+",0,"NA","intron (NM_177806, intron 1 of 13)","intron (NM_177806, intron 1 of 13)",387,"NM_177806",328110,"Mm.283339","NM_177806","ENSMUSG00000035597","Prpf39","Srcs1","PRP39 pre-mRNA processing factor 39 homolog (yeast)","protein-coding"]
[632,"chr10",54074490,54076643,"+",0,"NA","promoter-TSS (NR_038016)","promoter-TSS (NR_038016)",230,"NM_008548",17155,"Mm.117294","NM_008548","ENSMUSG00000003746","Man1a","Man1a1|PCR1","mannosidase 1, alpha","protein-coding"]
[2357,"chr14",20451058,20452191,"+",0,"NA","intron (NM_001163638, intron 1 of 28)","intron (NM_001163638, intron 1 of 28)",601,"NM_001163638",76670,"Mm.159759","NM_029698","ENSMUSG00000039543","Cfap70","Ttc18","cilia and flagella associated protein 70","protein-coding"]
[394,"chr1",165763177,165764708,"+",0,"NA","exon (NM_011804, exon 1 of 4)","exon (NM_011804, exon 1 of 4)",162,"NM_011804",433375,"Mm.294885","NM_011804","ENSMUSG00000040713","Creg1","AA755314|Creg","cellular repressor of E1A-stimulated genes 1","protein-coding"]
[1371,"chr11",86256959,86257919,"+",0,"NA","5' UTR (NM_027421, exon 1 of 25)","5' UTR (NM_027421, exon 1 of 25)",129,"NM_027421",70422,"Mm.171304","NM_027421","ENSMUSG00000018068","Ints2","2810417D08Rik|AA408260|AI987735|mKIAA1287","integrator complex subunit 2","protein-coding"]
[5068,"chr3",51339358,51342641,"+",0,"NA","promoter-TSS (NM_023502)","promoter-TSS (NM_023502)",-355,"NM_023502",69257,"Mm.131038","NM_023502","ENSMUSG00000037174","Elf2","2610036A20Rik|A230104O07Rik|AW111824|BB183398|EU32|NERF|NERF-1A|NERF-1B|NERF-2","E74-like factor 2","protein-coding"]
[4954,"chr2",168740526,168742790,"+",0,"NA","intron (NM_001289446, intron 1 of 27)","CpG",142,"NM_015731",11981,"Mm.330819","NM_015731","ENSMUSG00000027546","Atp9a","IIa","ATPase, class II, type 9A","protein-coding"]
[2645,"chr15",8108840,8109890,"+",0,"NA","promoter-TSS (NM_133227)","promoter-TSS (NM_133227)",52,"NM_133227",170762,"Mm.295168","NM_133227","ENSMUSG00000022142","Nup155","D930027M19Rik|mKIAA0791","nucleoporin 155","protein-coding"]
[1519,"chr11",101551383,101554158,"+",0,"NA","promoter-TSS (NM_009764)","promoter-TSS (NM_009764)",116,"NM_001252223",17966,"Mm.784","NM_008676","ENSMUSG00000017119","Nbr1","mKIAA0049","neighbor of Brca1 gene 1","protein-coding"]
[3173,"chr16",44723761,44725605,"+",0,"NA","intron (NM_145972, intron 1 of 8)","CpG",382,"NM_145972",212547,"Mm.310573","NM_145972","ENSMUSG00000036208","Nepro","-","nucleolus and neural progenitor protein","protein-coding"]
[2197,"chr13",67127780,67128562,"+",0,"NA","promoter-TSS (NM_172392)","promoter-TSS (NM_172392)",-57,"NM_172392",268670,"Mm.56274","NM_172392","ENSMUSG00000057396","Zfp759","BC028265|Rslcan-8|Rslcan8","zinc finger protein 759","protein-coding"]
[1236,"chr11",69995830,69997913,"+",0,"NA","promoter-TSS (NM_001291127)","promoter-TSS (NM_001291127)",-70,"NM_001291126",78246,"Mm.20805","NM_030064","ENSMUSG00000018572","Phf23","2001-06-01","PHD finger protein 23","protein-coding"]
[2413,"chr14",34309926,34312508,"+",0,"NA","promoter-TSS (NM_029389)","promoter-TSS (NM_029389)",490,"NM_008133",14661,"Mm.10600","NM_008133","ENSMUSG00000021794","Glud1","AI118167|Gdh-X|Glud|Gludl","glutamate dehydrogenase 1","protein-coding"]
[4400,"chr2",26638862,26640198,"+",0,"NA","promoter-TSS (NR_028571)","promoter-TSS (NR_028571)",-209,"NR_028571",100306954,"Mm.491822","NR_028571","ENSMUSG00000077192","Snora17","ACA17","small nucleolar RNA, H/ACA box 17","snoRNA"]
[5493,"chr4",40702329,40704735,"+",0,"NA","promoter-TSS (NM_001025445)","promoter-TSS (NM_001025445)",-338,"NM_001025445",66408,"Mm.430710","NM_025545","ENSMUSG00000028411","Aptx","2410016G21Rik|AA388047|FHA-HIT","aprataxin","protein-coding"]
[7037,"chr7",3644370,3646083,"+",0,"NA","promoter-TSS (NM_146176)","promoter-TSS (NM_146176)",-43,"NM_146176",232791,"Mm.358731","NM_146176","ENSMUSG00000035632","Cnot3","A930039N10Rik","CCR4-NOT transcription complex, subunit 3","protein-coding"]
[5015,"chr3",10439300,10440404,"+",0,"NA","intron (NM_001127191, intron 1 of 6)","CpG",278,"NM_029068",74718,"Mm.440548","NM_029068","ENSMUSG00000027534","Snx16","4930522N22Rik|AI117577|AI747675","sorting nexin 16","protein-coding"]
[1815,"chr12",69370495,69374652,"+",0,"NA","5' UTR (NM_007481, exon 2 of 2)","5' UTR (NM_007481, exon 2 of 2)",423,"NM_007481",11845,"Mm.27308","NM_007481","ENSMUSG00000044147","Arf6","AI788669|AW496366","ADP-ribosylation factor 6","protein-coding"]
[3662,"chr17",57247207,57250843,"+",0,"NA","promoter-TSS (NM_001242389)","promoter-TSS (NM_001242389)",-426,"NM_001242391",106628,"Mm.37368","NM_134125","ENSMUSG00000019487","Trip10","AI646975|Cip4","thyroid hormone receptor interactor 10","protein-coding"]
[1005,"chr11",17257470,17258399,"+",0,"NA","intron (NM_020558, intron 1 of 4)","intron (NM_020558, intron 1 of 4)",316,"NM_020558",57316,"Mm.287982","NM_020558","ENSMUSG00000000581","C1d","1110036E10Rik|AI875855|SUN-CoR","C1D nuclear receptor co-repressor","protein-coding"]
[4280,"chr19",53528542,53530153,"+",0,"NA","promoter-TSS (NM_001085390)","promoter-TSS (NM_001085390)",29,"NM_001085390",240672,"Mm.482424","NM_001085390",null,"Dusp5","Gm337","dual specificity phosphatase 5","protein-coding"]
[4130,"chr19",11965837,11966880,"+",0,"NA","intron (NM_001033174, intron 1 of 13)","CpG",514,"NM_001033174",76303,"Mm.291279","NM_001033174","ENSMUSG00000024687","Osbp","1110018F06Rik|AW559088|mKIAA4220","oxysterol binding protein","protein-coding"]
[2089,"chr13",38634444,38635126,"+",0,"NA","intron (NM_139063, intron 1 of 4)","CpG",324,"NM_139063",17828,"Mm.261554","NM_139063","ENSMUSG00000038982","Bloc1s5","1810074A19Rik|Muted|mu","biogenesis of lysosomal organelles complex-1, subunit 5, muted","protein-coding"]
[4575,"chr2",78867975,78869637,"+",0,"NA","promoter-TSS (NM_009454)","promoter-TSS (NM_009454)",-241,"NM_009454",22193,"Mm.1485","NM_009454",null,"Ube2e3","Ubce4|ubcM2","ubiquitin-conjugating enzyme E2E 3","protein-coding"]
[215,"chr1",87853344,87854015,"+",0,"NA","intron (NM_177646, intron 1 of 29)","CpG",392,"NM_177646",227333,"Mm.277217","NM_177646","ENSMUSG00000070738","Dgkd","AI841987|D330025K09|DGKdelta|dgkd-2","diacylglycerol kinase, delta","protein-coding"]
[4410,"chr2",27710536,27712111,"+",0,"NA","intron (NM_001290482, intron 1 of 9)","intron (NM_001290482, intron 1 of 9)",740,"NM_001290482",20181,"Mm.24624","NM_011305","ENSMUSG00000015846","Rxra","9530071D11Rik|Nr2b1|RXRalpha1","retinoid X receptor alpha","protein-coding"]
[687,"chr10",69924252,69928197,"+",0,"NA","intron (NM_170687, intron 1 of 19)","intron (NM_170687, intron 1 of 19)",692,"NM_009670",11735,"Mm.235960","NM_009670","ENSMUSG00000069601","Ank3","2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G","ankyrin 3, epithelial","protein-coding"]
[5824,"chr4",130274916,130275504,"+",0,"NA","promoter-TSS (NM_001253386)","promoter-TSS (NM_001253386)",10,"NM_001253386",230779,"Mm.45132","NM_172702","ENSMUSG00000023232","Serinc2","2310004K20Rik|AW121759|FKSG84|TDE2|Tde2l","serine incorporator 2","protein-coding"]
[5509,"chr4",42999284,43000903,"+",0,"NA","intron (NM_009503, intron 1 of 16)","CpG",414,"NM_009503",269523,"Mm.245976","NM_009503","ENSMUSG00000028452","Vcp","3110001E05|CDC48|p97|p97/VCP","valosin containing protein","protein-coding"]
[5692,"chr4",115827718,115828434,"+",0,"NA","promoter-TSS (NM_175308)","promoter-TSS (NM_175308)",-16,"NM_175308",100465,"Mm.35571","NM_175308","ENSMUSG00000028709","Mob3c","AW822253|D130076I06Rik|Mobkl2c","MOB kinase activator 3C","protein-coding"]
[2336,"chr14",8172426,8173782,"+",0,"NA","promoter-TSS (NM_024221)","promoter-TSS (NM_024221)",-112,"NM_024221",68263,"Mm.301527","NM_024221","ENSMUSG00000021748","Pdhb","2610103L06Rik|AL024199|C81408","pyruvate dehydrogenase (lipoamide) beta","protein-coding"]
[5872,"chr4",134237166,134239181,"+",0,"NA","intron (NM_001081047, intron 1 of 20)","intron (NM_001081047, intron 1 of 20)",226,"NM_001081047",194231,"Mm.331958","NM_001081047","ENSMUSG00000028841","Cnksr1","BC037758","connector enhancer of kinase suppressor of Ras 1","protein-coding"]
[4424,"chr2",29935029,29936336,"+",0,"NA","intron (NM_028923, intron 1 of 15)","CpG",273,"NM_028923",74412,"Mm.275121","NM_028923",null,"Gle1","4933405K21Rik|AA553313|Gle1l","GLE1 RNA export mediator (yeast)","protein-coding"]
[2190,"chr13",64369880,64370893,"+",0,"NA","5' UTR (NM_009984, exon 1 of 8)","5' UTR (NM_009984, exon 1 of 8)",134,"NM_009984",13039,"Mm.930","NM_009984","ENSMUSG00000021477","Ctsl","1190035F06Rik|CatL|Ctsl1|MEP|fs|nkt","cathepsin L","protein-coding"]
[826,"chr10",92721806,92722340,"+",0,"NA","intron (NM_008682, intron 1 of 14)","CpG",345,"NM_008682",17997,"Mm.2998","NM_008682","ENSMUSG00000019988","Nedd1","-","neural precursor cell expressed, developmentally down-regulated gene 1","protein-coding"]
[3990,"chr19",4037537,4038186,"+",0,"NA","promoter-TSS (NM_013541)","promoter-TSS (NM_013541)",51,"NM_013541",14870,"Mm.299292","NM_013541","ENSMUSG00000060803","Gstp1","GstpiB","glutathione S-transferase, pi 1","protein-coding"]
[5467,"chr4",22356822,22358236,"+",0,"NA","promoter-TSS (NM_172988)","promoter-TSS (NM_172988)",-14,"NR_104379",269514,"Mm.40708","NM_172988","ENSMUSG00000040410","Fbxl4","AI836810|FBL4|FBL5","F-box and leucine-rich repeat protein 4","protein-coding"]
[7344,"chr7",55841409,55843946,"+",0,"NA","intron (NM_001164662, intron 1 of 30)","CpG",606,"NM_001164661",20430,"Mm.37249","NM_011370","ENSMUSG00000030447","Cyfip1","E030028J09Rik|P140SRA-1|P140sra1|Shyc|Sra-1|Sra1|l(7)1Rl|l71Rl|l7Rl1|mKIAA0068|pl-1","cytoplasmic FMR1 interacting protein 1","protein-coding"]
[5265,"chr3",99140811,99142010,"+",0,"NA","intron (NM_027462, intron 1 of 5)","CpG",320,"NM_027462",70560,"Mm.316754","NM_027462","ENSMUSG00000004233","Wars2","5730427B17Rik|9430020O07Rik|AI413375|TrpRS","tryptophanyl tRNA synthetase 2 (mitochondrial)","protein-coding"]
[7030,"chr6",149187737,149189633,"+",0,"NA","promoter-TSS (NM_001113424)","promoter-TSS (NM_001113424)",27,"NM_001113424",232566,"Mm.209147","NM_001113424","ENSMUSG00000068250","Amn1","5830467E07Rik|A230083D09|C730024G19Rik","antagonist of mitotic exit network 1","protein-coding"]
[6418,"chr5",122849251,122851142,"+",0,"NA","promoter-TSS (NM_030564)","promoter-TSS (NM_030564)",8,"NM_030564",80751,"Mm.388529","NM_030564",null,"Rnf34","AW061037|AW536122|BC004042|C88279|RIFF","ring finger protein 34","protein-coding"]
[2980,"chr15",103272416,103273324,"+",0,"NA","promoter-TSS (NM_019817)","promoter-TSS (NM_019817)",-48,"NM_019817",56447,"Mm.29473","NM_019817","ENSMUSG00000060992","Copz1","5930435A22Rik|AA407760|D4Ertd360e","coatomer protein complex, subunit zeta 1","protein-coding"]
[2548,"chr14",67070600,67070776,"+",0,"NA","intron (NM_001205188, intron 1 of 9)","intron (NM_001205188, intron 1 of 9)",1783,"NM_028032",71978,"Mm.273997","NM_028032","ENSMUSG00000022052","Ppp2r2a","2410004D02Rik|mKIAA1541","protein phosphatase 2, regulatory subunit B, alpha","protein-coding"]
[5088,"chr3",59191081,59196124,"+",0,"NA","intron (NM_001302203, intron 1 of 2)","intron (NM_001302203, intron 1 of 2)",1502,"NM_001302203",84111,"Mm.60267","NM_032399","ENSMUSG00000051431","Gpr87","-","G protein-coupled receptor 87","protein-coding"]
[7878,"chr8",64945479,64948420,"+",0,"NA","promoter-TSS (NM_001163747)","promoter-TSS (NM_001163747)",-236,"NM_001163747",73067,"Mm.294445","NM_028427","ENSMUSG00000025521","Tmem192","3110005G23Rik","transmembrane protein 192","protein-coding"]
[730,"chr10",79703867,79707774,"+",0,"NA","intron (NM_001077184, intron 1 of 6)","intron (NM_001077184, intron 1 of 6)",1462,"NM_009768",12215,"Mm.726","NM_009768","ENSMUSG00000023175","Bsg","AI115436|AI325119|CD147|EMMPRIN|HT-7","basigin","protein-coding"]
[2880,"chr15",85879495,85879745,"+",0,"NA","intron (NM_028063, intron 1 of 10)","intron (NM_028063, intron 1 of 10)",293,"NM_028063",72026,"Mm.158211","NM_028063","ENSMUSG00000022386","Trmu","1110005N20Rik|1600025P05Rik|AI314320|Trmt1","tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase","protein-coding"]
[7998,"chr8",84688879,84689831,"+",0,"NA","5' UTR (NM_198020, exon 1 of 17)","5' UTR (NM_198020, exon 1 of 17)",108,"NM_198020",212528,"Mm.275720","NM_198020","ENSMUSG00000001909","Trmt1","6720406L13Rik|6720477L24|D8Ertd812e","tRNA methyltransferase 1","protein-coding"]
[6847,"chr6",87812358,87812551,"+",0,"NA","promoter-TSS (NR_104477)","promoter-TSS (NR_104477)",-290,"NR_104478",69834,"Mm.37380","NM_133717","ENSMUSG00000030055","Rab43","1810048P08Rik|2500004H21Rik|AW490415","RAB43, member RAS oncogene family","protein-coding"]
[8972,"chrX",163908571,163909289,"+",0,"NA","promoter-TSS (NM_026887)","promoter-TSS (NM_026887)",-87,"NM_001290378",108012,"Mm.426783","NM_026887","ENSMUSG00000031367","Ap1s2","1500012A13Rik|AI853648|EST1","adaptor-related protein complex 1, sigma 2 subunit","protein-coding"]
[3578,"chr17",45569943,45575045,"+",0,"NA","intron (NM_008302, intron 1 of 10)","CpG",767,"NM_008302",15516,"Mm.2180","NM_008302","ENSMUSG00000023944","Hsp90ab1","90kDa|AL022974|C81438|Hsp84|Hsp84-1|Hsp90|Hspcb","heat shock protein 90 alpha (cytosolic), class B member 1","protein-coding"]
[8130,"chr8",109737227,109737676,"+",0,"NA","intron (NM_001080930, intron 1 of 3)","CpG",288,"NM_001080930",52335,"Mm.276770","NM_001080930","ENSMUSG00000069895","Atxn1l","AW558552|Boat|C330011L24Rik|D6Mgi37|D8Ertd587e|ENSMUSG00000069895","ataxin 1-like","protein-coding"]
[1306,"chr11",77512563,77514701,"+",0,"NA","promoter-TSS (NM_001024920)","promoter-TSS (NM_001024920)",-359,"NM_001024920",216964,"Mm.341211","NM_001024920","ENSMUSG00000044328","Trp53i13","2410019G02Rik|Tp53i13","transformation related protein 53 inducible protein 13","protein-coding"]
[4594,"chr2",90579093,90581994,"+",0,"NA","exon (NM_008982, exon 1 of 24)","exon (NM_008982, exon 1 of 24)",104,"NM_008982",19271,"Mm.330393","NM_008982","ENSMUSG00000025314","Ptprj","AI450271|BET|Byp|CD148|DEP-1|PTPbeta2|Ptpb2|RPTPJ|Scc-1|Scc1","protein tyrosine phosphatase, receptor type, J","protein-coding"]
[4724,"chr2",122027807,122029464,"+",0,"NA","promoter-TSS (NM_144545)","promoter-TSS (NM_144545)",52,"NM_001256055",100042807,"Mm.329403","NM_001256055","ENSMUSG00000043424","Eif3j2","ENSMUSG00000043424|Eif3j-2|Gm9781|eIF3 p35|eIF3j-B","eukaryotic translation initiation factor 3, subunit J2","protein-coding"]
[2819,"chr15",79229018,79230143,"+",0,"NA","intron (NM_001045558, intron 1 of 12)","CpG",198,"NM_001045558",18693,"Mm.259464","NM_008837","ENSMUSG00000068206","Pick1","Prkcabp","protein interacting with C kinase 1","protein-coding"]
[5389,"chr3",142700469,142701397,"+",0,"NA","promoter-TSS (NM_173763)","promoter-TSS (NM_173763)",-115,"NM_173763",229905,"Mm.289643","NM_173763","ENSMUSG00000040213","Ccbl2","KATIII|Kat3","cysteine conjugate-beta lyase 2","protein-coding"]
[2256,"chr13",92484141,92484302,"+",0,"NA","promoter-TSS (NM_001163627)","promoter-TSS (NM_001163627)",-190,"NM_001163627",73942,"Mm.85935","NM_001163627","ENSMUSG00000034334","Fam151b","4930405M20Rik","family with sequence similarity 151, member B","protein-coding"]
[8314,"chr9",25150850,25153795,"+",0,"NA","promoter-TSS (NM_020586)","promoter-TSS (NM_020586)",-541,"NM_020586",80517,"Mm.142843","NM_020586","ENSMUSG00000008429","Herpud2","5031400M07Rik|AB041580","HERPUD family member 2","protein-coding"]
[5089,"chr3",59922853,59926052,"+",0,"NA","promoter-TSS (NM_177661)","promoter-TSS (NM_177661)",-762,"NM_177661",229333,"Mm.75765","NM_177661","ENSMUSG00000036951","C130079G13Rik","-","RIKEN cDNA C130079G13 gene","protein-coding"]
[4749,"chr2",127586626,127587860,"+",0,"NA","promoter-TSS (NM_029963)","promoter-TSS (NM_029963)",-183,"NM_029963",77721,"Mm.274601","NM_029963",null,"Mrps5","1620401I16Rik|AI850294","mitochondrial ribosomal protein S5","protein-coding"]
[6861,"chr6",91515516,91516572,"+",0,"NA","promoter-TSS (NM_009531)","promoter-TSS (NM_009531)",9,"NM_026309",67678,"Mm.246693","NM_026309","ENSMUSG00000034192","Lsm3","1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2","LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)","protein-coding"]
[270,"chr1",118458745,118460335,"+",0,"NA","promoter-TSS (NR_027901)","promoter-TSS (NR_027901)",-275,"NR_027901",68204,"Mm.443536","NR_027901","ENSMUSG00000107722","2900060B14Rik","-","RIKEN cDNA 2900060B14 gene","ncRNA"]
[8180,"chr8",120100709,120102103,"+",0,"NA","promoter-TSS (NM_133967)","promoter-TSS (NM_133967)",66,"NM_133967",102193,"Mm.240076","NM_133967","ENSMUSG00000031823","Zdhhc7","AL024087|Gramp2","zinc finger, DHHC domain containing 7","protein-coding"]
[5037,"chr3",31093099,31096159,"+",0,"NA","promoter-TSS (NM_011386)","promoter-TSS (NM_011386)",-429,"NM_011386",20482,"Mm.15406","NM_011386","ENSMUSG00000027660","Skil","Skir|SnoN|sno","SKI-like","protein-coding"]
[5139,"chr3",87929665,87930925,"+",0,"NA","promoter-TSS (NM_177663)","promoter-TSS (NM_177663)",-19,"NM_177663",229504,"Mm.45744","NM_177663","ENSMUSG00000048039","Isg20l2","4930429N24|C80587","interferon stimulated exonuclease gene 20-like 2","protein-coding"]
[6395,"chr5",121220395,121220824,"+",0,"NA","exon (NM_181421, exon 1 of 76)","exon (NM_181421, exon 1 of 76)",390,"NM_181421",269700,"Mm.184589","NM_181421","ENSMUSG00000042744","Gm15800","A130010L24|AU042671|BC019639|EG545802|OTTMUSG00000026283|mKIAA0614","predicted gene 15800","protein-coding"]
[6859,"chr6",91155092,91157782,"+",0,"NA","promoter-TSS (NM_144919)","promoter-TSS (NM_144919)",-378,"NM_144919",232232,"Mm.206218","NM_144919","ENSMUSG00000034245","Hdac11","-","histone deacetylase 11","protein-coding"]
[3393,"chr17",26068556,26070641,"+",0,"NA","promoter-TSS (NM_001162869)","promoter-TSS (NM_001162869)",-421,"NM_001162869",215445,"Mm.41191","NM_153140","ENSMUSG00000037098","Rab11fip3","Cart1|D030060O14Rik|Rab11-FIP3|mKIAA0665","RAB11 family interacting protein 3 (class II)","protein-coding"]
[6039,"chr4",156108161,156110499,"+",0,"NA","promoter-TSS (NM_177205)","promoter-TSS (NM_177205)",-668,"NM_145557",230996,"Mm.318925","NM_145557","ENSMUSG00000059939","9430015G10Rik","-","RIKEN cDNA 9430015G10 gene","protein-coding"]
[5411,"chr3",152346207,152347153,"+",0,"NA","intron (NM_001076676, intron 1 of 23)","CpG",202,"NM_001076676",170822,"Mm.258320","NM_133247","ENSMUSG00000025437","Usp33","9830169D19Rik|AA409780|Vdu1","ubiquitin specific peptidase 33","protein-coding"]
[1219,"chr11",69665351,69666934,"+",0,"NA","promoter-TSS (NM_001291058)","promoter-TSS (NM_001291058)",28,"NM_001291058",12514,"Mm.15819","NM_009853","ENSMUSG00000018774","Cd68","Lamp4|Scard1|gp110","CD68 antigen","protein-coding"]
[6772,"chr6",66534889,66535801,"+",0,"NA","promoter-TSS (NM_019499)","promoter-TSS (NM_019499)",-123,"NM_019499",56150,"Mm.489653","NM_019499","ENSMUSG00000029910","Mad2l1","AA673185|MAD2","MAD2 mitotic arrest deficient-like 1","protein-coding"]
[7799,"chr8",25754083,25754968,"+",0,"NA","promoter-TSS (NM_028102)","promoter-TSS (NM_028102)",-245,"NM_028102",72108,"Mm.246875","NM_028102","ENSMUSG00000061313","Ddhd2","2010305K11Rik|SAMWD1|mKIAA0725","DDHD domain containing 2","protein-coding"]
[8391,"chr9",50616574,50617726,"+",0,"NA","promoter-TSS (NM_028300)","promoter-TSS (NM_028300)",-171,"NM_028300",72614,"Mm.147232","NM_028300","ENSMUSG00000000167","Pih1d2","2700059L22Rik","PIH1 domain containing 2","protein-coding"]
[7783,"chr8",22411031,22411780,"+",0,"NA","promoter-TSS (NM_020560)","promoter-TSS (NM_020560)",65,"NM_020560",57312,"Mm.289402","NM_020560","ENSMUSG00000031533","Mrps31","1500002D03Rik|AA960481|Imogen38|Imogen44","mitochondrial ribosomal protein S31","protein-coding"]
[2737,"chr15",62037870,62038216,"+",0,"NA","promoter-TSS (NR_003368)","promoter-TSS (NR_003368)",57,"NR_003368",19296,"Mm.4608","NM_011222","ENSMUSG00000097039","Pvt1","Ayu21-84Imeg|Gt(pU21)84Imeg|Mis-1|Mlvi-1|Pvt-1","plasmacytoma variant translocation 1","ncRNA"]
[804,"chr10",85102119,85103089,"+",0,"NA","promoter-TSS (NM_001013028)","promoter-TSS (NM_001013028)",-23,"NM_001013028",103266,"Mm.335025","NM_001013028","ENSMUSG00000060935","Tmem263","AI597468","transmembrane protein 263","protein-coding"]
[8095,"chr8",105700477,105702200,"+",0,"NA","promoter-TSS (NM_001047435)","promoter-TSS (NM_001047435)",190,"NM_001286344",56513,"Mm.472753","NM_019695","ENSMUSG00000005699","Pard6a","0710008C04Rik|2610010A15Rik|PAR-6A|PAR6alpha|Par-6|Par6|Par6c|TAX40|Tip-40","par-6 family cell polarity regulator alpha","protein-coding"]
[8407,"chr9",53666532,53667504,"+",0,"NA","intron (NM_001161618, intron 1 of 17)","CpG",489,"NM_001161618",75717,"Mm.218910","NM_027807","ENSMUSG00000032030","Cul5","4921514I20Rik|8430423K24Rik|AI852817|C030032G03Rik|C330021I08Rik|VACM-1|VACM1","cullin 5","protein-coding"]
[4156,"chr19",24476584,24478070,"+",0,"NA","exon (NM_026520, exon 1 of 1)","exon (NM_026520, exon 1 of 1)",147,"NM_026520",68034,"Mm.440181","NM_026520",null,"Fam122a","2410124L17Rik|2900009I07Rik|ENSMUSG00000051082|Gm9849","family with sequence similarity 122, member A","protein-coding"]
[143,"chr1",64616643,64617814,"+",0,"NA","promoter-TSS (NM_025964)","promoter-TSS (NM_025964)",-60,"NM_025964",67099,"Mm.46394","NM_025964","ENSMUSG00000025956","Mettl21a","2310038H17Rik|AI464204|Fam119a","methyltransferase like 21A","protein-coding"]
[7800,"chr8",25784188,25785978,"+",0,"NA","promoter-TSS (NM_026032)","promoter-TSS (NM_026032)",126,"NM_026121",67384,"Mm.118400","NM_026121","ENSMUSG00000037316","Bag4","2410112I15Rik|SODD","BCL2-associated athanogene 4","protein-coding"]
[2822,"chr15",79402608,79403860,"+",0,"NA","promoter-TSS (NM_001253819)","promoter-TSS (NM_001253819)",5,"NM_001253820",223693,"Mm.323358","NM_172608","ENSMUSG00000009035","Tmem184b","2610507A11|4732495E13Rik","transmembrane protein 184b","protein-coding"]
[2914,"chr15",97904154,97908897,"+",0,"NA","intron (NM_009504, intron 1 of 9)","intron (NM_009504, intron 1 of 9)",1771,"NM_009504",22337,"Mm.245084","NM_009504","ENSMUSG00000022479","Vdr","Nr1i1","vitamin D receptor","protein-coding"]
[2399,"chr14",31132757,31134974,"+",0,"NA","promoter-TSS (NM_027289)","promoter-TSS (NM_027289)",-988,"NM_027289",70021,"Mm.261681","NM_027289","ENSMUSG00000071547","Nt5dc2","2510015F01Rik","5'-nucleotidase domain containing 2","protein-coding"]
[8548,"chr9",80066665,80068501,"+",0,"NA","intron (NM_001311110, intron 1 of 23)","CpG",680,"NM_146003",215351,"Mm.28232","NM_146003","ENSMUSG00000034252","Senp6","2810017C20Rik|E130319N12Rik|Susp1|mKIAA0797","SUMO/sentrin specific peptidase 6","protein-coding"]
[7559,"chr7",119894950,119897062,"+",0,"NA","promoter-TSS (NM_001163703)","promoter-TSS (NM_001163703)",145,"NM_001285960",73919,"Mm.46381","NM_029610","ENSMUSG00000030922","Lyrm1","1110065L10Rik|2310004B22Rik|4930404J24Rik","LYR motif containing 1","protein-coding"]
[3068,"chr16",18391689,18397357,"+",0,"NA","intron (NM_001272031, intron 1 of 16)","intron (NM_001272031, intron 1 of 16)",1960,"NM_001272032",11877,"Mm.293599","NM_033474","ENSMUSG00000000325","Arvcf","-","armadillo repeat gene deleted in velo-cardio-facial syndrome","protein-coding"]
[8257,"chr9",15237939,15239698,"+",0,"NA","promoter-TSS (NM_026955)","promoter-TSS (NM_026955)",-227,"NM_026955",69137,"Mm.41396","NM_026955","ENSMUSG00000031937","Vstm5","2200002K05Rik","V-set and transmembrane domain containing 5","protein-coding"]
[8149,"chr8",111536173,111539955,"+",0,"NA","promoter-TSS (NM_001168623)","promoter-TSS (NM_001168623)",-279,"NM_001168623",170737,"Mm.271578","NM_133206","ENSMUSG00000033545","Znrf1","B830022L21Rik|Rnf42|Zrfp1|nin283","zinc and ring finger 1","protein-coding"]
[3910,"chr18",62547532,62549258,"+",0,"NA","promoter-TSS (NM_177829)","promoter-TSS (NM_177829)",348,"NM_134136",107035,"Mm.21295","NM_134136","ENSMUSG00000042211","Fbxo38","6030410I24Rik|AU044865|AW214031|Moka|SP329","F-box protein 38","protein-coding"]
[857,"chr10",111472966,111473873,"+",0,"NA","intron (NM_015781, intron 1 of 15)","CpG",227,"NM_015781",53605,"Mm.290407","NM_015781","ENSMUSG00000058799","Nap1l1","AA407126|AI256722|D10Ertd68e|NAP-1","nucleosome assembly protein 1-like 1","protein-coding"]
[8475,"chr9",64178868,64179924,"+",0,"NA","promoter-TSS (NM_183316)","promoter-TSS (NM_183316)",99,"NM_183316",330959,"Mm.24082","NM_183316","ENSMUSG00000032398","Snapc5","2010103A03Rik","small nuclear RNA activating complex, polypeptide 5","protein-coding"]
[4685,"chr2",119034441,119035446,"+",0,"NA","exon (NM_173450, exon 1 of 3)","exon (NM_173450, exon 1 of 3)",153,"NM_173450",271842,"Mm.33617","NM_173450",null,"Rpusd2","4921503C21Rik|9630001E10|BB231107","RNA pseudouridylate synthase domain containing 2","protein-coding"]
[7768,"chr8",13869552,13870329,"+",0,"NA","intron (NM_181854, intron 1 of 1)","CpG",299,"NM_181854",101994,"Mm.289346","NM_181854","ENSMUSG00000047710","Champ1","AA675043|AI116001|D8Ertd457e|D8Ertd569e|Zfp828|Znf828|mKIAA1802","chromosome alignment maintaining phosphoprotein 1","protein-coding"]
[3407,"chr17",27018047,27018486,"+",0,"NA","intron (NM_001251881, intron 1 of 6)","intron (NM_001251881, intron 1 of 6)",231,"NM_001251881",70772,"Mm.440437","NM_027544","ENSMUSG00000048731","Ggnbp1","0610031G08Rik|mdf","gametogenetin binding protein 1","protein-coding"]
[5900,"chr4",136143073,136147760,"+",0,"NA","TTS (NM_008321)","TTS (NM_008321)",1594,"NM_008321",15903,"Mm.110","NM_008321",null,"Id3","Hlh462|Idb3|bHLHb25","inhibitor of DNA binding 3","protein-coding"]
[2111,"chr13",45001214,45002106,"+",0,"NA","intron (NM_025772, intron 1 of 9)","CpG",436,"NM_025772",94245,"Mm.352311","NM_025772","ENSMUSG00000057531","Dtnbp1","5430437B18Rik|AW048963|Bloc1s8|dysbindin|sdy","dystrobrevin binding protein 1","protein-coding"]
[669,"chr10",62650392,62651616,"+",0,"NA","intron (NM_053183, intron 1 of 14)","CpG",194,"NM_053183",94213,"Mm.114116","NM_053183","ENSMUSG00000020076","Ddx50","4933429B04Rik|8430408E17Rik|GU2|RH-II","DEAD (Asp-Glu-Ala-Asp) box polypeptide 50","protein-coding"]
[1348,"chr11",82890048,82890520,"+",0,"NA","intron (NM_001277938, intron 1 of 9)","intron (NM_001277938, intron 1 of 9)",340,"NR_102719",19364,"Mm.9286","NM_011235",null,"Rad51d","R51H3|Rad51l3|TRAD|Trad-d5","RAD51 homolog D","protein-coding"]
[7147,"chr7",25217676,25222348,"+",0,"NA","promoter-TSS (NM_207677)","promoter-TSS (NM_207677)",-153,"NM_207677",67379,"Mm.280594","NM_026117","ENSMUSG00000054499","Dedd2","2410050E11Rik|FLAME-3","death effector domain-containing DNA binding protein 2","protein-coding"]
[3504,"chr17",34626900,34628946,"+",0,"NA","promoter-TSS (NM_019441)","promoter-TSS (NM_019441)",93,"NM_001302394",54397,"Mm.373627","NM_019441","ENSMUSG00000015474","Ppt2","0610007M19Rik|AA672937","palmitoyl-protein thioesterase 2","protein-coding"]
[8552,"chr9",83547974,83549552,"+",0,"NA","intron (NM_172507, intron 1 of 3)","intron (NM_172507, intron 1 of 3)",425,"NM_172507",212531,"Mm.491246","NM_172507",null,"Sh3bgrl2","A930014C21Rik|AA408038|B930089I21","SH3 domain binding glutamic acid-rich protein like 2","protein-coding"]
[7317,"chr7",45703812,45709456,"+",0,"NA","exon (NM_016974, exon 2 of 4)","exon (NM_016974, exon 2 of 4)",1387,"NM_016974",13170,"Mm.24222","NM_016974","ENSMUSG00000059824","Dbp","-","D site albumin promoter binding protein","protein-coding"]
[5732,"chr4",119067033,119069051,"+",0,"NA","intron (NR_131914, intron 1 of 1)","intron (NR_131914, intron 1 of 1)",1069,"NR_131914",433751,"Mm.224312","NR_131914",null,"Gm12866","OTTMUSG00000008833","predicted gene 12866","ncRNA"]
[2968,"chr15",102202895,102205116,"+",0,"NA","promoter-TSS (NM_001289695)","promoter-TSS (NM_001289695)",360,"NM_001289691",68744,"Mm.352945","NM_153194","ENSMUSG00000046897","Zfp740","1110034O07Rik|AW548228|Znf740","zinc finger protein 740","protein-coding"]
[1192,"chr11",62648816,62649305,"+",0,"NA","promoter-TSS (NM_198861)","promoter-TSS (NM_198861)",396,"NM_175002",216829,"Mm.295306","NM_175002",null,"Mmgt2","AI852046","membrane magnesium transporter 2","protein-coding"]
[2975,"chr15",102721634,102722089,"+",0,"NA","intron (NM_026192, intron 1 of 14)","intron (NM_026192, intron 1 of 14)",317,"NM_026192",67488,"Mm.71682","NM_026192","ENSMUSG00000023055","Calcoco1","1810009B06Rik|Cocoa|Gcap11|mKIAA1536","calcium binding and coiled coil domain 1","protein-coding"]
[4691,"chr2",119476656,119478604,"+",0,"NA","promoter-TSS (NM_026574)","promoter-TSS (NM_026574)",-1,"NM_026574",68142,"Mm.330496","NM_026574","ENSMUSG00000034154","Ino80","2310079N15Rik|4632409L19Rik|Inoc1","INO80 homolog (S. cerevisiae)","protein-coding"]
[4832,"chr2",151740895,151741528,"+",0,"NA","promoter-TSS (NM_212446)","promoter-TSS (NM_212446)",99,"NM_212446",228769,"Mm.146984","NM_144889","ENSMUSG00000032869","Psmf1","AW048666|BC012260|PI31","proteasome (prosome, macropain) inhibitor subunit 1","protein-coding"]
[2515,"chr14",57889474,57890277,"+",0,"NA","intron (NM_029492, intron 1 of 12)","CpG",387,"NM_029492",75965,"Mm.29044","NM_029492","ENSMUSG00000021969","Zdhhc20","5033406L14Rik|AI448102|B230110O18Rik|HK11","zinc finger, DHHC domain containing 20","protein-coding"]
[3977,"chr18",88891537,88894619,"+",0,"NA","intron (NM_018821, intron 1 of 2)","intron (NM_018821, intron 1 of 2)",1129,"NM_018821",54607,"Mm.91920","NM_018821","ENSMUSG00000056153","Socs6","1500012M23Rik|5830401B18Rik|AI447482|Cis4|Cish4|HSPC060|SOCS-4|SOCS-6|SSI4|STAI4|STATI4|Socs4","suppressor of cytokine signaling 6","protein-coding"]
[4282,"chr19",53902029,53905298,"+",0,"NA","intron (NM_001168491, intron 1 of 11)","CpG",312,"NM_001168491",18569,"Mm.1605","NM_011050","ENSMUSG00000024975","Pdcd4","D19Ucla1|Ma3|Tis","programmed cell death 4","protein-coding"]
[5552,"chr4",53011919,53013063,"+",0,"NA","intron (NM_025623, intron 1 of 5)","intron (NM_025623, intron 1 of 5)",567,"NM_025623",66536,"Mm.38244","NM_025623","ENSMUSG00000015247","Nipsnap3b","2700063N13Rik|Nipsnap3a","nipsnap homolog 3B (C. elegans)","protein-coding"]
[30,"chr1",23919749,23922300,"+",0,"NA","intron (NM_028534, intron 1 of 9)","intron (NM_028534, intron 1 of 9)",1357,"NM_028534",98366,"Mm.329963","NM_028534","ENSMUSG00000026155","Smap1","1700056O10Rik|4921514B13Rik|4921525H11Rik|AI462175","small ArfGAP 1","protein-coding"]
[2151,"chr13",54621306,54623324,"+",0,"NA","intron (NM_178397, intron 1 of 10)","intron (NM_178397, intron 1 of 10)",531,"NM_178397",76577,"Mm.194459","NM_178397","ENSMUSG00000025873","Faf2","2210404D11Rik|AI462440|Ubxd8|mKIAA0887","Fas associated factor family member 2","protein-coding"]
[618,"chr10",43901305,43902148,"+",0,"NA","promoter-TSS (NM_130892)","promoter-TSS (NM_130892)",10,"NM_001081054",76563,"Mm.5904","NM_001081054","ENSMUSG00000019863","Qrsl1","2700038P16Rik|C80053|GatA","glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1","protein-coding"]
[5043,"chr3",34019375,34020819,"+",0,"NA","promoter-TSS (NM_001113188)","promoter-TSS (NM_001113188)",18,"NM_001113188",14359,"Mm.259021","NM_008053","ENSMUSG00000027680","Fxr1","1110050J02Rik|9530073J07Rik|AI851072|Fxr1h|Fxr1p","fragile X mental retardation gene 1, autosomal homolog","protein-coding"]
[8177,"chr8",119840259,119840989,"+",0,"NA","promoter-TSS (NM_028071)","promoter-TSS (NM_028071)",-45,"NM_028071",72042,"Mm.393405","NM_028071","ENSMUSG00000031827","Cotl1","1810074P22Rik|2010004C08Rik|Clp","coactosin-like 1 (Dictyostelium)","protein-coding"]
[2662,"chr15",25621566,25625540,"+",0,"NA","intron (NM_019472, intron 1 of 40)","intron (NM_019472, intron 1 of 40)",1003,"NM_019472",17909,"Mm.60590","NM_019472","ENSMUSG00000022272","Myo10","AW048724|D15Ertd600e|mKIAA0799","myosin X","protein-coding"]
[6438,"chr5",124351597,124355021,"+",0,"NA","intron (NM_013812, intron 1 of 3)","intron (NM_013812, intron 1 of 3)",1319,"NM_013812",13445,"Mm.391838","NM_013812","ENSMUSG00000029394","Cdk2ap1","Apc10|Cdkap1|DORC1|Doc1|ST19|doc-1|p12","CDK2 (cyclin-dependent kinase 2)-associated protein 1","protein-coding"]
[1719,"chr12",4916953,4919016,"+",0,"NA","intron (NM_001099628, intron 1 of 30)","CpG",631,"NM_001099628",320817,"Mm.210966","NM_001099628",null,"Atad2b","1110014E10Rik|BC032887|C79189|D530031C13Rik","ATPase family, AAA domain containing 2B","protein-coding"]
[5849,"chr4",132920740,132923460,"+",0,"NA","intron (NM_145553, intron 1 of 8)","intron (NM_145553, intron 1 of 8)",451,"NM_145553",230789,"Mm.11473","NM_145553","ENSMUSG00000028878","Fam76a","-","family with sequence similarity 76, member A","protein-coding"]
[1481,"chr11",100133180,100137183,"+",0,"NA","intron (NM_008469, intron 1 of 7)","intron (NM_008469, intron 1 of 7)",768,"NM_008469",16665,"Mm.440010","NM_008469","ENSMUSG00000054146","Krt15","AI528832|K15|Krt1-15","keratin 15","protein-coding"]
[2927,"chr15",98830883,98832451,"+",0,"NA","promoter-TSS (NM_016781)","promoter-TSS (NM_016781)",-159,"NM_016781",19082,"Mm.6670","NM_016781","ENSMUSG00000067713","Prkag1","AA571379|BB036179|Prkaac","protein kinase, AMP-activated, gamma 1 non-catalytic subunit","protein-coding"]
[512,"chr10",3265708,3270476,"+",0,"NA","promoter-TSS (NM_001204916)","promoter-TSS (NM_001204916)",-321,"NM_001204916",670558,"Mm.398582","NM_001204916","ENSMUSG00000091618","H60c","4632413I24Rik|Gm9491","histocompatibility 60c","protein-coding"]
[463,"chr1",181013930,181018259,"+",0,"NA","intron (NM_001312918, intron 1 of 8)","intron (NM_001312918, intron 1 of 8)",1475,"NM_010145",13849,"Mm.9075","NM_010145","ENSMUSG00000038776","Ephx1","EH|Eph-1|Eph1|Epxh1|mEH","epoxide hydrolase 1, microsomal","protein-coding"]
[1363,"chr11",84868695,84871615,"+",0,"NA","promoter-TSS (NR_131197)","promoter-TSS (NR_131197)",150,"NR_131201",102635561,"Mm.341797","NR_131197",null,"Ggnbp2os","-","gametogenetin binding protein 2, opposite strand","ncRNA"]
[3051,"chr16",17200858,17201731,"+",0,"NA","intron (NM_009456, intron 1 of 3)","CpG",198,"NM_009456",22195,"Mm.3074","NM_009456","ENSMUSG00000038965","Ube2l3","C79827|UbcM4|Ubce7","ubiquitin-conjugating enzyme E2L 3","protein-coding"]
[8219,"chr8",124231622,124232388,"+",0,"NA","intron (NM_139272, intron 1 of 15)","CpG",611,"NM_139272",108148,"Mm.33808","NM_139272","ENSMUSG00000089704","Galnt2","AI480629","UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2","protein-coding"]
[742,"chr10",80048731,80048997,"+",0,"NA","intron (NR_110342, intron 2 of 6)","intron (NR_110342, intron 2 of 6)",1698,"NR_110342",625249,"Mm.332810","NM_008162","ENSMUSG00000075706","Gpx4","GPx-4|GSHPx-4|PHGPx|mtPHGPx|snGPx","glutathione peroxidase 4","protein-coding"]
[8473,"chr9",64021839,64022777,"+",0,"NA","promoter-TSS (NM_008542)","promoter-TSS (NM_008542)",-249,"NM_008542",17130,"Mm.325757","NM_008542","ENSMUSG00000036867","Smad6","Madh6|b2b390Clo","SMAD family member 6","protein-coding"]
[4980,"chr2",180169489,180172524,"+",0,"NA","promoter-TSS (NM_019822)","promoter-TSS (NM_019822)",-582,"NM_019822",56436,"Mm.316654","NM_019822","ENSMUSG00000039041","Adrm1","1110063P18Rik|2510006J17Rik|AA408205|ARM-1|AU043535|Arm1|Gp110|Rpn13","adhesion regulating molecule 1","protein-coding"]
[8646,"chr9",107871976,107873930,"+",0,"NA","promoter-TSS (NM_011251)","promoter-TSS (NM_011251)",-134,"NM_029169",19654,"Mm.139926","NM_011251","ENSMUSG00000032582","Rbm6","4930506F14Rik|Def-3|NY-LU-12|g16|mKIAA4015","RNA binding motif protein 6","protein-coding"]
[4671,"chr2",117119378,117122886,"+",0,"NA","promoter-TSS (NM_001277256)","promoter-TSS (NM_001277256)",61,"NM_033524",114715,"Mm.245890","NM_033524","ENSMUSG00000027351","Spred1","5730461F13Rik|AL024345|AW047647","sprouty protein with EVH-1 domain 1, related sequence","protein-coding"]
[4519,"chr2",57114577,57117572,"+",0,"NA","intron (NM_001139509, intron 1 of 7)","intron (NM_001139509, intron 1 of 7)",-1036,"NM_013613",18227,"Mm.3507","NM_013613","ENSMUSG00000026826","Nr4a2","HZF-3|NOT|Nurr1|RNR-1|TINOR|TINUR","nuclear receptor subfamily 4, group A, member 2","protein-coding"]
[5598,"chr4",83485643,83486734,"+",0,"NA","intron (NM_001290527, intron 1 of 10)","CpG-10005",260,"NM_001290527",101739,"Mm.105331","NM_133948","ENSMUSG00000028484","Psip1","AA408851|AU015605|Dfs70|Ledgfa|Ledgfb|Psip2","PC4 and SFRS1 interacting protein 1","protein-coding"]
[2441,"chr14",47567817,47568386,"+",0,"NA","intron (NM_172599, intron 1 of 9)","intron (NM_172599, intron 1 of 9)",333,"NM_172599",100504663,"Mm.287279","NM_172599","ENSMUSG00000037526","Atg14","4832427M01|Atg14L|D14Ertd114e|D14Ertd436e","autophagy related 14","protein-coding"]
[4657,"chr2",112284582,112284955,"+",0,"NA","promoter-TSS (NM_133648)","promoter-TSS (NM_133648)",80,"NM_133648",107723,"Mm.491155","NM_133648","ENSMUSG00000027130","Slc12a6","9530023I19Rik|KCC3|gaxp","solute carrier family 12, member 6","protein-coding"]
[2285,"chr13",100107609,100108302,"+",0,"NA","promoter-TSS (NM_011353)","promoter-TSS (NM_011353)",-64,"NM_011353",20365,"Mm.286177","NM_011353","ENSMUSG00000021643","Serf1","4F5|Msmac1|m4F5","small EDRK-rich factor 1","protein-coding"]
[8791,"chrX",17571159,17572270,"+",0,"NA","intron (NM_028058, intron 1 of 4)","intron (NM_028058, intron 1 of 4)",293,"NM_001313746",72018,"Mm.41558","NM_028058","ENSMUSG00000025040","Fundc1","1500005J14Rik|1810033P05Rik","FUN14 domain containing 1","protein-coding"]
[1135,"chr11",57801083,57802185,"+",0,"NA","promoter-TSS (NR_131042)","promoter-TSS (NR_131042)",-3,"NM_001081168",50724,"Mm.340083","NM_001081168",null,"Sap30l","2310079P12Rik|AF006998|L55","SAP30-like","protein-coding"]
[5930,"chr4",140663739,140666704,"+",0,"NA","intron (NM_001290803, intron 1 of 28)","intron (NM_001290803, intron 1 of 28)",666,"NM_001290803",72754,"Mm.29329","NM_172415","ENSMUSG00000040964","Arhgef10l","2810441C07Rik","Rho guanine nucleotide exchange factor (GEF) 10-like","protein-coding"]
[1760,"chr12",32378794,32380093,"+",0,"NA","exon (NM_001162903, exon 1 of 1)","exon (NM_001162903, exon 1 of 1)",654,"NM_001162903",72123,"Mm.341352","NM_028111","ENSMUSG00000090946","Ccdc71l","2010109K11Rik|AV375874","coiled-coil domain containing 71 like","protein-coding"]
[8796,"chrX",20687056,20688961,"+",0,"NA","promoter-TSS (NM_011049)","promoter-TSS (NM_011049)",54,"NM_001310456",18555,"Mm.102574","NM_011049","ENSMUSG00000031065","Cdk16","Crk5|Pctaire1|Pctk1","cyclin-dependent kinase 16","protein-coding"]
[5596,"chr4",83323037,83324599,"+",0,"NA","intron (NM_027238, intron 1 of 19)","CpG",371,"NM_027238",69863,"Mm.5540","NM_025782","ENSMUSG00000038172","Ttc39b","1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585","tetratricopeptide repeat domain 39B","protein-coding"]
[8581,"chr9",96630449,96631753,"+",0,"NA","intron (NM_053268, intron 1 of 23)","CpG",402,"NM_053268",114713,"Mm.124502","NM_053268","ENSMUSG00000032413","Rasa2","5430433H21Rik|AA517451|AU023900|GAP1m","RAS p21 protein activator 2","protein-coding"]
[8090,"chr8",105469175,105471213,"+",0,"NA","intron (NM_026481, intron 1 of 3)","intron (NM_026481, intron 1 of 3)",1228,"NM_026481",67971,"Mm.29358","NM_026481","ENSMUSG00000014846","Tppp3","2700055K07Rik|CGI-38|Ceacam9|mmCGM8","tubulin polymerization-promoting protein family member 3","protein-coding"]
[8273,"chr9",20887769,20888991,"+",0,"NA","intron (NM_145610, intron 1 of 10)","CpG",205,"NM_145610",235036,"Mm.2930","NM_145610","ENSMUSG00000004100","Ppan","A230087P06Rik|SSF1","peter pan homolog (Drosophila)","protein-coding"]
[8264,"chr9",19622209,19622661,"+",0,"NA","intron (NM_172918, intron 1 of 8)","intron (NM_172918, intron 1 of 8)",344,"NM_172918",244713,"Mm.67366","NM_172918",null,"Zfp317","4932416G03|D230022C05Rik|KRAB9|Zfp67|Zfp75|mszf40","zinc finger protein 317","protein-coding"]
[8540,"chr9",78113404,78113655,"+",0,"NA","intron (NM_019987, intron 1 of 13)","CpG",291,"NM_019987",56542,"Mm.288719","NM_019987","ENSMUSG00000009828","Ick","2210420N10Rik|AI848300|Mrk","intestinal cell kinase","protein-coding"]
[3311,"chr17",15563888,15564888,"+",0,"NA","Intergenic","CpG",-1065,"NM_144809",213389,"Mm.215162","NM_144809","ENSMUSG00000051977","Prdm9","BC012016|Dsbc1|G1-419-29|Meisetz|PRDM9-B|Rcr1|repro7","PR domain containing 9","protein-coding"]
[7953,"chr8",72547406,72548837,"+",0,"NA","5' UTR (NM_027485, exon 1 of 3)","5' UTR (NM_027485, exon 1 of 3)",189,"NM_027485",70625,"Mm.235885","NM_027485","ENSMUSG00000045248","Med26","5730493L18Rik|AI414941|AW495270|Crsp7","mediator complex subunit 26","protein-coding"]
[8328,"chr9",35267418,35268453,"+",0,"NA","promoter-TSS (NM_028040)","promoter-TSS (NM_028040)",54,"NM_028040",71989,"Mm.273515","NM_028040","ENSMUSG00000032044","Rpusd4","2410001E19Rik","RNA pseudouridylate synthase domain containing 4","protein-coding"]
[4137,"chr19",16435189,16436640,"+",0,"NA","5' UTR (NM_008137, exon 1 of 7)","5' UTR (NM_008137, exon 1 of 7)",247,"NM_008137",14675,"Mm.313181","NM_008137","ENSMUSG00000024697","Gna14","AU023208","guanine nucleotide binding protein, alpha 14","protein-coding"]
[7405,"chr7",81344391,81345631,"+",0,"NA","intron (NM_009092, intron 1 of 4)","CpG-13305",223,"NM_009092",20068,"Mm.42767","NM_009092","ENSMUSG00000061787","Rps17","-","ribosomal protein S17","protein-coding"]
[4806,"chr2",144555564,144556806,"+",0,"NA","promoter-TSS (NM_001252545)","promoter-TSS (NM_001252545)",-44,"NM_001252544",27054,"Mm.248492","NM_019787","ENSMUSG00000027429","Sec23b","-","SEC23 homolog B, COPII coat complex component","protein-coding"]
[6385,"chr5",119669428,119673072,"+",0,"NA","promoter-TSS (NM_011535)","promoter-TSS (NM_011535)",17,"NM_011535",21386,"Mm.219139","NM_011535","ENSMUSG00000018604","Tbx3","D5Ertd189e","T-box 3","protein-coding"]
[2419,"chr14",40947255,40951436,"+",0,"NA","intron (NM_145928, intron 1 of 8)","intron (NM_145928, intron 1 of 8)",-1136,"NM_001316748",52588,"Mm.28876","NM_145928","ENSMUSG00000037824","Tspan14","AA958793|D14Ertd226e|Tm4sf14|tspan-14","tetraspanin 14","protein-coding"]
[5544,"chr4",48124940,48125244,"+",0,"NA","intron (NM_026343, intron 1 of 7)","CpG",173,"NM_026343",67727,"Mm.171334","NM_026343","ENSMUSG00000061455","Stx17","4833418L03Rik|6330411F21Rik|9030425C21Rik|AW048351","syntaxin 17","protein-coding"]
[5113,"chr3",75955980,75957607,"+",0,"NA","5' UTR (NM_175193, exon 1 of 15)","5' UTR (NM_175193, exon 1 of 15)",156,"NM_175193",73124,"Mm.249232","NM_175193","ENSMUSG00000034109","Golim4","3110027H23Rik|GIMPC|GPP130|Golph4|P138","golgi integral membrane protein 4","protein-coding"]
[3004,"chr16",8636776,8638583,"+",0,"NA","promoter-TSS (NM_016881)","promoter-TSS (NM_016881)",22,"NM_025708",66690,"Mm.10068","NM_025708","ENSMUSG00000043140","Tmem186","2810440M13Rik|4432406C05Rik|AI648175|AW210586","transmembrane protein 186","protein-coding"]
[3939,"chr18",70563967,70570251,"+",0,"NA","Intergenic","Intergenic",-1183,"NM_001311071",17191,"Mm.322","NM_010773","ENSMUSG00000024513","Mbd2","MBD2a","methyl-CpG binding domain protein 2","protein-coding"]
[51,"chr1",36556534,36559068,"+",0,"NA","promoter-TSS (NM_001304330)","promoter-TSS (NM_001304330)",-244,"NM_001304329",20353,"Mm.29558","NM_001126047","ENSMUSG00000026121","Sema4c","AI426163|M-Sema F|Semacl1|Semaf|Semai|sema I","sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C","protein-coding"]
[456,"chr1",180640716,180641997,"+",0,"NA","non-coding (NR_120498, exon 1 of 15)","non-coding (NR_120498, exon 1 of 15)",206,"NR_120498",72568,"Mm.275044","NM_175186","ENSMUSG00000058729","Lin9","2700022J23Rik|Bara|Lin-9|TGS|TGS1|mLin-9","lin-9 homolog (C. elegans)","protein-coding"]
[7093,"chr7",16613999,16616062,"+",0,"NA","promoter-TSS (NM_172739)","promoter-TSS (NM_172739)",-37,"NM_172739",232906,"Mm.28646","NM_172739","ENSMUSG00000058230","Arhgap35","6430596G11Rik|AI841135|Grlf1|mKIAA1722|p190A|p190RhoGAP","Rho GTPase activating protein 35","protein-coding"]
[1539,"chr11",103016662,103016987,"+",0,"NA","intron (NM_026551, intron 1 of 4)","intron (NM_026551, intron 1 of 4)",323,"NM_026551",68087,"Mm.277449","NM_026551","ENSMUSG00000020935","Dcakd","3010024O21Rik|6720485C15Rik|AI849483","dephospho-CoA kinase domain containing","protein-coding"]
[6054,"chr5",7960030,7961229,"+",0,"NA","intron (NM_054098, intron 1 of 4)","intron (NM_054098, intron 1 of 4)",157,"NM_054098",117167,"Mm.31403","NM_054098","ENSMUSG00000012428","Steap4","1110021O17Rik|AI481214|Tiarp|Tnfaip9","STEAP family member 4","protein-coding"]
[5621,"chr4",97776966,97780352,"+",0,"NA","intron (NM_010905, intron 1 of 10)","CpG",1033,"NM_010905",18027,"Mm.31274","NM_010905","ENSMUSG00000028565","Nfia","1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A","nuclear factor I/A","protein-coding"]
[6196,"chr5",63967041,63968853,"+",0,"NA","intron (NM_145923, intron 1 of 6)","intron (NM_145923, intron 1 of 6)",950,"NM_145923",100532,"Mm.243632","NM_145923","ENSMUSG00000047881","Rell1","AA536743","RELT-like 1","protein-coding"]
[6440,"chr5",124440002,124440402,"+",0,"NA","intron (NM_001310725, intron 1 of 6)","CpG",272,"NM_001310725",67956,"Mm.137966","NM_030241","ENSMUSG00000049327","Setd8","2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07","SET domain containing (lysine methyltransferase) 8","protein-coding"]
[7052,"chr7",4865606,4866892,"+",0,"NA","promoter-TSS (NM_026158)","promoter-TSS (NM_026158)",-70,"NM_026158",67441,"Mm.41385","NM_026158","ENSMUSG00000052605","Isoc2b","0610042E07Rik|AI553388|Isoc2","isochorismatase domain containing 2b","protein-coding"]
[1011,"chr11",20249097,20249857,"+",0,"NA","promoter-TSS (NM_172260)","promoter-TSS (NM_172260)",-53,"NM_172260",216543,"Mm.260314","NM_172260","ENSMUSG00000044066","Cep68","6030463E10Rik|AI481761|BC027174|Kiaa0582","centrosomal protein 68","protein-coding"]
[4515,"chr2",52072988,52073560,"+",0,"NA","intron (NM_175238, intron 2 of 35)","CpG-8094",437,"NM_175238",51869,"Mm.254530","NM_175238","ENSMUSG00000036202","Rif1","5730435J01Rik|6530403D07Rik|AU016181|AW549474|D2Ertd145e","Rap1 interacting factor 1 homolog (yeast)","protein-coding"]
[4779,"chr2",131352141,131353214,"+",0,"NA","intron (NM_178607, intron 1 of 5)","CpG",215,"NM_178607",51902,"Mm.477523","NM_178607","ENSMUSG00000048911","Rnf24","2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e","ring finger protein 24","protein-coding"]
[1442,"chr11",97314999,97316092,"+",0,"NA","promoter-TSS (NM_025927)","promoter-TSS (NM_025927)",-171,"NM_025927",67036,"Mm.5381","NM_025927","ENSMUSG00000018882","Mrpl45","2600005P05Rik|AU043542|R75241","mitochondrial ribosomal protein L45","protein-coding"]
[2316,"chr13",112660339,112661180,"+",0,"NA","promoter-TSS (NM_178746)","promoter-TSS (NM_178746)",-7,"NM_178746",268706,"Mm.40834","NM_175376","ENSMUSG00000047789","Slc38a9","4833412L08Rik|6720411P22Rik|9130023D20Rik|9430067K09Rik|A730092C09","solute carrier family 38, member 9","protein-coding"]
[6832,"chr6",86393190,86398228,"+",0,"NA","intron (NM_025823, intron 2 of 5)","intron (NM_025823, intron 2 of 5)",1441,"NM_025823",66881,"Mm.30849","NM_025823","ENSMUSG00000029998","Pcyox1","1200015P13Rik|AI115532|AI448340|PCL1|Pcly","prenylcysteine oxidase 1","protein-coding"]
[4109,"chr19",8919902,8921936,"+",0,"NA","intron (NM_024256, intron 1 of 4)","L2c|LINE|L2",526,"NM_024256",72727,"Mm.259","NM_024256","ENSMUSG00000071649","B3gat3","2810405M13Rik","beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)","protein-coding"]
[4401,"chr2",26902452,26903758,"+",0,"NA","promoter-TSS (NM_009298)","promoter-TSS (NM_009298)",-292,"NM_009298",20935,"Mm.245577","NM_009298","ENSMUSG00000036160","Surf6","D2Wsu129e|Surf-6","surfeit gene 6","protein-coding"]
[1383,"chr11",87403900,87405163,"+",0,"NA","promoter-TSS (NM_031386)","promoter-TSS (NM_031386)",-36,"NM_053269",114714,"Mm.37376","NM_053269","ENSMUSG00000007646","Rad51c","R51H3|Rad51l2","RAD51 homolog C","protein-coding"]
[4504,"chr2",39004398,39006125,"+",0,"NA","promoter-TSS (NM_025592)","promoter-TSS (NM_025592)",-130,"NM_025592",66489,"Mm.345333","NM_025592",null,"Rpl35","2410039E09Rik","ribosomal protein L35","protein-coding"]
[3794,"chr18",24120387,24122381,"+",0,"NA","intron (NM_172625, intron 1 of 4)","intron (NM_172625, intron 1 of 4)",435,"NM_172625",225280,"Mm.258973","NM_172625","ENSMUSG00000047989","Ino80c","D030070L09Rik","INO80 complex subunit C","protein-coding"]
[3884,"chr18",52465430,52466283,"+",0,"NA","intron (NM_026040, intron 1 of 7)","CpG",163,"NM_026040",67222,"Mm.100617","NM_026040","ENSMUSG00000024528","Srfbp1","2810036K01Rik|p49/STRAP","serum response factor binding protein 1","protein-coding"]
[8347,"chr9",43104145,43107894,"+",0,"NA","promoter-TSS (NM_027144)","promoter-TSS (NM_027144)",-301,"NM_027144",69632,"Mm.275266","NM_027144","ENSMUSG00000059495","Arhgef12","2310014B11Rik|AU019857|Larg|mKIAA0382","Rho guanine nucleotide exchange factor (GEF) 12","protein-coding"]
[1601,"chr11",115162754,115166149,"+",0,"NA","intron (NM_012030, intron 1 of 5)","intron (NM_012030, intron 1 of 5)",1110,"NM_012030",26941,"Mm.27842","NM_012030","ENSMUSG00000020733","Slc9a3r1","EBP-50|NHE-RF|NHERF-1|NHERF1","solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1","protein-coding"]
[2467,"chr14",54430657,54434949,"+",0,"NA","intron (NM_008608, intron 1 of 9)","intron (NM_008608, intron 1 of 9)",1199,"NM_008608",17387,"Mm.280175","NM_008608","ENSMUSG00000000957","Mmp14","AI325305|MT-MMP-1|MT1-MMP|sabe","matrix metallopeptidase 14 (membrane-inserted)","protein-coding"]
[8785,"chrX",12760875,12762780,"+",0,"NA","promoter-TSS (NR_045852)","promoter-TSS (NR_045852)",146,"NM_012005",26896,"Mm.17616","NM_012005","ENSMUSG00000064127","Med14","9930001L01Rik|AU041628|Crsp2|ENSMUSG00000073278|Gm641|ORF1|Trap170","mediator complex subunit 14","protein-coding"]
[8968,"chrX",162759560,162761361,"+",0,"NA","promoter-TSS (NM_009031)","promoter-TSS (NM_009031)",88,"NM_009031",245688,"Mm.270186","NM_009031","ENSMUSG00000031353","Rbbp7","AA409861|AI173248|AU019541|BB114024|mRbAp46","retinoblastoma binding protein 7","protein-coding"]
[6909,"chr6",115675226,115677133,"+",0,"NA","intron (NM_029780, intron 1 of 16)","CpG",456,"NM_029780",110157,"Mm.184163","NM_029780","ENSMUSG00000000441","Raf1","6430402F14Rik|AA990557|BB129353|Craf1|D830050J10Rik|Raf-1|c-Raf|v-Raf","v-raf-leukemia viral oncogene 1","protein-coding"]
[1331,"chr11",79339097,79340040,"+",0,"NA","promoter-TSS (NM_010897)","promoter-TSS (NM_010897)",-324,"NM_010897",18015,"Mm.255596","NM_010897","ENSMUSG00000020716","Nf1","AW494271|Dsk9|E030030H24Rik|Mhdadsk9|Nf-1","neurofibromatosis 1","protein-coding"]
[2383,"chr14",27039093,27039569,"+",0,"NA","intron (NM_134437, intron 1 of 12)","CpG",330,"NM_134437",171463,"Mm.206726","NM_027265","ENSMUSG00000040717","Il17rd","2810004A10Rik|AI428510|Sef|Sef-S","interleukin 17 receptor D","protein-coding"]
[6378,"chr5",117318839,117319760,"+",0,"NA","promoter-TSS (NM_001033311)","promoter-TSS (NM_001033311)",33,"NM_001033311",231668,"Mm.298603","NM_001033311","ENSMUSG00000066894","Vsig10","-","V-set and immunoglobulin domain containing 10","protein-coding"]
[3234,"chr16",90220417,90221096,"+",0,"NA","promoter-TSS (NM_011434)","promoter-TSS (NM_011434)",14,"NM_011434",20655,"Mm.276325","NM_011434","ENSMUSG00000022982","Sod1","B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1","superoxide dismutase 1, soluble","protein-coding"]
[8802,"chrX",23693117,23693833,"+",0,"NA","exon (NM_175180, exon 1 of 20)","exon (NM_175180, exon 1 of 20)",424,"NM_001305675",72404,"Mm.423","NM_175180","ENSMUSG00000036769","Wdr44","2610034K17Rik|RAB11BP|RPH11","WD repeat domain 44","protein-coding"]
[4916,"chr2",163691975,163692293,"+",0,"NA","intron (NM_001039390, intron 2 of 4)","intron (NM_001039390, intron 2 of 4)",-1903,"NM_011106",18769,"Mm.10091","NM_011106","ENSMUSG00000035268","Pkig","PKIgamma","protein kinase inhibitor, gamma","protein-coding"]
[6900,"chr6",113530965,113531600,"+",0,"NA","promoter-TSS (NM_001033244)","promoter-TSS (NM_001033244)",356,"NM_175101",66087,"Mm.275989","NM_175101","ENSMUSG00000030286","Emc3","0610039A15Rik|AI225901|AW260416|Pob|Tmem111","ER membrane protein complex subunit 3","protein-coding"]
[7233,"chr7",30625701,30626522,"+",0,"NA","promoter-TSS (NM_025628)","promoter-TSS (NM_025628)",40,"NM_025628",110323,"Mm.400","NM_025628","ENSMUSG00000036751","Cox6b1","2010000G05Rik|Cox6b","cytochrome c oxidase, subunit VIb polypeptide 1","protein-coding"]
[7416,"chr7",82648570,82650217,"+",0,"NA","promoter-TSS (NM_177894)","promoter-TSS (NM_177894)",779,"NM_175317",101592,"Mm.238020","NM_175317","ENSMUSG00000038563","Eftud1","4932434J20Rik|6030468D11Rik|AI451340|AU019507|AU022896|D7Ertd791e","elongation factor Tu GTP binding domain containing 1","protein-coding"]
[3416,"chr17",27634647,27635560,"+",0,"NA","intron (NM_025963, intron 1 of 5)","CpG",139,"NM_025963",67097,"Mm.275810","NM_025963","ENSMUSG00000052146","Rps10","2210402A09Rik","ribosomal protein S10","protein-coding"]
[766,"chr10",80754227,80755994,"+",0,"NA","promoter-TSS (NM_199322)","promoter-TSS (NM_199322)",-96,"NM_199322",208266,"Mm.152371","NM_199322","ENSMUSG00000061589","Dot1l","A630076O07|AW907654|Dot1|KMT4|mDot1","DOT1-like, histone H3 methyltransferase (S. cerevisiae)","protein-coding"]
[1574,"chr11",107130849,107133615,"+",0,"NA","promoter-TSS (NM_176850)","promoter-TSS (NM_176850)",-310,"NM_176850",207165,"Mm.343986","NM_176850","ENSMUSG00000040481","Bptf","9430093H17Rik|Falz","bromodomain PHD finger transcription factor","protein-coding"]
[7438,"chr7",92666581,92671171,"+",0,"NA","intron (NM_029078, intron 1 of 15)","intron (NM_029078, intron 1 of 15)",1036,"NM_029078",74737,"Mm.288645","NM_029078","ENSMUSG00000041328","Pcf11","2500001H09Rik|5730417B17Rik|C77803","cleavage and polyadenylation factor subunit homolog (S. cerevisiae)","protein-coding"]
[6254,"chr5",90364445,90367295,"+",0,"NA","exon (NM_030886, exon 1 of 34)","exon (NM_030886, exon 1 of 34)",315,"NM_030886",81702,"Mm.245522","NM_030886","ENSMUSG00000055204","Ankrd17","4933425K22Rik|A130069E23Rik|A930008M01|AA407558|AA516750|AU040470|Foe|Gtar|Mask|mKIAA0697","ankyrin repeat domain 17","protein-coding"]
[8356,"chr9",44325796,44327702,"+",0,"NA","promoter-TSS (NM_007875)","promoter-TSS (NM_007875)",-96,"NM_007875",13478,"Mm.18353","NM_007875","ENSMUSG00000032123","Dpagt1","AU021132|Dpagt2|GPT|Gnpta","dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)","protein-coding"]
[8065,"chr8",95351796,95352959,"+",0,"NA","promoter-TSS (NM_008609)","promoter-TSS (NM_008609)",40,"NM_008609",17388,"Mm.217116","NM_008609","ENSMUSG00000031790","Mmp15","AI503551|MT2-MMP","matrix metallopeptidase 15","protein-coding"]
[3726,"chr17",84465478,84466698,"+",0,"NA","intron (NM_183021, intron 1 of 37)","CpG",120,"NM_183021",240174,"Mm.246767","NM_177826","ENSMUSG00000024251","Thada","6530405K19|A930021O22|AU019899|BC052885|GITA","thyroid adenoma associated","protein-coding"]
[2944,"chr15",99875092,99875867,"+",0,"NA","promoter-TSS (NM_001113545)","promoter-TSS (NM_001113545)",-23,"NM_001113545",65970,"Mm.33207","NM_023063","ENSMUSG00000023022","Lima1","Eplin","LIM domain and actin binding 1","protein-coding"]
[7156,"chr7",25658200,25659584,"+",0,"NA","promoter-TSS (NM_007533)","promoter-TSS (NM_007533)",-131,"NM_007533",12039,"Mm.25848","NM_007533","ENSMUSG00000060376","Bckdha","-","branched chain ketoacid dehydrogenase E1, alpha polypeptide","protein-coding"]
[257,"chr1",106714509,106714793,"+",0,"NA","promoter-TSS (NM_009741)","promoter-TSS (NM_009741)",-361,"NM_177410",12043,"Mm.257460","NM_009741","ENSMUSG00000057329","Bcl2","AW986256|Bcl-2|C430015F12Rik|D630044D05Rik|D830018M01Rik","B cell leukemia/lymphoma 2","protein-coding"]
[85,"chr1",45925461,45926072,"+",0,"NA","promoter-TSS (NM_016917)","promoter-TSS (NM_016917)",-172,"NM_016917",53945,"Mm.28756","NM_016917","ENSMUSG00000025993","Slc40a1","Dusg|Fpn1|IREG1|MTP|MTP1|Ol5|Pcm|Slc11a3|Slc39a1","solute carrier family 40 (iron-regulated transporter), member 1","protein-coding"]
[809,"chr10",85927964,85928638,"+",0,"NA","promoter-TSS (NM_001163614)","promoter-TSS (NM_001163614)",-190,"NM_001163614",67341,"Mm.382315","NM_001163614",null,"Ascl4","1700054F16Rik|bHLHa44","achaete-scute complex homolog 4 (Drosophila)","protein-coding"]
[7580,"chr7",126376808,126378197,"+",0,"NA","non-coding (NR_045537, exon 1 of 13)","non-coding (NR_045537, exon 1 of 13)",432,"NM_023712",73658,"Mm.11112","NM_023712","ENSMUSG00000030741","Spns1","2210013K02Rik|Spin1|Spinl","spinster homolog 1","protein-coding"]
[5569,"chr4",59188869,59190246,"+",0,"NA","promoter-TSS (NM_011673)","promoter-TSS (NM_011673)",7,"NM_011673",22234,"Mm.198803","NM_011673","ENSMUSG00000028381","Ugcg","AU043821|C80537|Epcs21|GlcT-1|Ugcgl","UDP-glucose ceramide glucosyltransferase","protein-coding"]
[3339,"chr17",23801875,23804607,"+",0,"NA","promoter-TSS (NM_175229)","promoter-TSS (NM_175229)",54,"NM_175229",75956,"Mm.5222","NM_175229","ENSMUSG00000039218","Srrm2","5033413A03Rik|AA410130|SRm300|mKIAA0324","serine/arginine repetitive matrix 2","protein-coding"]
[4369,"chr2",24949866,24950436,"+",0,"NA","promoter-TSS (NM_147179)","promoter-TSS (NM_147179)",-7,"NM_147179",67187,"Mm.296106","NM_026021",null,"Zmynd19","2700064H14Rik|AA536891|AU014915|mizip","zinc finger, MYND domain containing 19","protein-coding"]
[2354,"chr14",20294719,20295204,"+",0,"NA","intron (NM_026341, intron 1 of 8)","intron (NM_026341, intron 1 of 8)",271,"NM_026341",67725,"Mm.317636","NM_026341","ENSMUSG00000021809","Nudt13","4933433B15Rik","nudix (nucleoside diphosphate linked moiety X)-type motif 13","protein-coding"]
[7698,"chr7",141437128,141437575,"+",0,"NA","intron (NM_026646, intron 1 of 9)","CpG",523,"NM_026646",68267,"Mm.33729","NM_026646","ENSMUSG00000019082","Slc25a22","1300006L01Rik|AI060884|Gc1","solute carrier family 25 (mitochondrial carrier, glutamate), member 22","protein-coding"]
[175,"chr1",75140954,75143442,"+",0,"NA","promoter-TSS (NM_001305232)","promoter-TSS (NM_001305232)",170,"NM_026977",69171,"Mm.28193","NM_026977","ENSMUSG00000033159","Cnppd1","1810031K17Rik|AU043960","cyclin Pas1/PHO80 domain containing 1","protein-coding"]
[584,"chr10",33950645,33951189,"+",0,"NA","intron (NM_028287, intron 1 of 9)","intron (NM_028287, intron 1 of 9)",295,"NM_028287",72580,"Mm.248081","NM_028287","ENSMUSG00000039531","Zufsp","2700019D07Rik","zinc finger with UFM1-specific peptidase domain","protein-coding"]
[1421,"chr11",95823669,95825905,"+",0,"NA","intron (NM_153104, intron 1 of 2)","intron (NM_153104, intron 1 of 2)",287,"NM_153104",237928,"Mm.133075","NM_153104","ENSMUSG00000050860","Phospho1","D11Moh36|Phospo1","phosphatase, orphan 1","protein-coding"]
[3021,"chr16",11322488,11324192,"+",0,"NA","intron (NM_028964, intron 1 of 20)","intron (NM_028964, intron 1 of 20)",436,"NM_028964",74478,"Mm.325831","NM_028964","ENSMUSG00000071669","Snx29","4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a","sorting nexin 29","protein-coding"]
[7883,"chr8",68793557,68794606,"+",0,"NA","exon (NM_027590, exon 1 of 17)","exon (NM_027590, exon 1 of 17)",152,"NM_001293792",70885,"Mm.252421","NM_027590","ENSMUSG00000031864","Ints10","4921521J11Rik|AI462004","integrator complex subunit 10","protein-coding"]
[2670,"chr15",27629588,27631570,"+",0,"NA","exon (NM_001013792, exon 1 of 7)","exon (NM_001013792, exon 1 of 7)",114,"NM_001013792",432940,"Mm.309164","NM_001013792","ENSMUSG00000046034","Otulin","C79097|Fam105b|m3Sapc|m7-1Sapc","OTU deubiquitinase with linear linkage specificity","protein-coding"]
[648,"chr10",59879029,59882219,"+",0,"NA","intron (NM_019965, intron 1 of 8)","intron (NM_019965, intron 1 of 8)",1033,"NM_019965",56709,"Mm.103610","NM_019965","ENSMUSG00000020109","Dnajb12","Dj10|mDj10","DnaJ (Hsp40) homolog, subfamily B, member 12","protein-coding"]
[4453,"chr2",31687935,31689007,"+",0,"NA","promoter-TSS (NM_001283046)","promoter-TSS (NM_001283046)",-66,"NM_001283047",11350,"Mm.1318","NM_009594","ENSMUSG00000026842","Abl1","AI325092|Abl|E430008G22Rik|c-Abl","c-abl oncogene 1, non-receptor tyrosine kinase","protein-coding"]
[8522,"chr9",72661705,72663290,"+",0,"NA","5' UTR (NM_010890, exon 1 of 29)","5' UTR (NM_010890, exon 1 of 29)",150,"NM_010890",17999,"Mm.279923","NM_010890","ENSMUSG00000032216","Nedd4","AA959633|AL023035|AU019897|E430025J12Rik|Nedd4-1|Nedd4a|mKIAA0093","neural precursor cell expressed, developmentally down-regulated 4","protein-coding"]
[7657,"chr7",132610425,132610855,"+",0,"NA","promoter-TSS (NM_029609)","promoter-TSS (NM_029609)",-3,"NM_029609",76429,"Mm.276721","NM_029609","ENSMUSG00000030946","Lhpp","2310007H09Rik","phospholysine phosphohistidine inorganic pyrophosphate phosphatase","protein-coding"]
[6698,"chr6",39204852,39208078,"+",0,"NA","exon (NM_001033430, exon 1 of 20)","exon (NM_001033430, exon 1 of 20)",308,"NM_001033430",338523,"Mm.293175","NM_001033430","ENSMUSG00000042599","Kdm7a","A630082K20Rik|BB041802|ENSMUSG00000073143|Jhdm1d|mKIAA1718","lysine (K)-specific demethylase 7A","protein-coding"]
[3349,"chr17",24250812,24251161,"+",0,"NA","intron (NM_007634, intron 1 of 16)","intron (NM_007634, intron 1 of 16)",423,"NM_007634",12449,"Mm.77695","NM_007634","ENSMUSG00000072082","Ccnf","CycF|Fbxo1","cyclin F","protein-coding"]
[6179,"chr5",45520020,45520709,"+",0,"NA","exon (NM_025895, exon 1 of 4)","exon (NM_025895, exon 1 of 4)",135,"NM_025895",66999,"Mm.283045","NM_025895","ENSMUSG00000015804","Med28","1500003D12Rik|AI451633|AU045690|Eg1|FKSG20|magicin","mediator complex subunit 28","protein-coding"]
[202,"chr1",85774954,85775481,"+",0,"NA","promoter-TSS (NR_108086)","promoter-TSS (NR_108086)",-54,"NR_108086",77762,"Mm.434298","NR_108086","ENSMUSG00000100217","9930111H07Rik","-","RIKEN cDNA 9930111H07 gene","ncRNA"]
[307,"chr1",133660407,133661730,"+",0,"NA","promoter-TSS (NM_001166552)","promoter-TSS (NM_001166552)",-183,"NM_001166552",667118,"Mm.245357","NM_001166552","ENSMUSG00000102049","Zbed6","Gm8466|MGR","zinc finger, BED type containing 6","protein-coding"]
[8630,"chr9",106886454,106888143,"+",0,"NA","promoter-TSS (NM_175402)","promoter-TSS (NM_175402)",-298,"NM_175402",109095,"Mm.431589","NM_175402",null,"Rbm15b","1810017N16Rik","RNA binding motif protein 15B","protein-coding"]
[6229,"chr5",74092662,74094501,"+",0,"NA","promoter-TSS (NR_031758)","promoter-TSS (NR_031758)",51,"NR_031758",100313943,"Mm.46547","NR_031758","ENSMUSG00000093355","Snora26","MBI-6","small nucleolar RNA, H/ACA box 26","snoRNA"]
[1463,"chr11",98410630,98414861,"+",0,"NA","intron (NM_001003817, intron 1 of 26)","CpG",261,"NM_001003817",13866,"Mm.290822","NM_001003817","ENSMUSG00000062312","Erbb2","Erbb-2|HER-2|HER2|Neu|c-erbB2|c-neu|l11Jus8|mKIAA3023","v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)","protein-coding"]
[2801,"chr15",77398683,77399041,"+",0,"NA","intron (NM_029419, intron 1 of 5)","MT2B1|LTR|ERVL",248,"NM_029419",75761,"Mm.232636","NM_029419","ENSMUSG00000010601","Apol7a","9130022K13Rik|Apol3","apolipoprotein L 7a","protein-coding"]
[8222,"chr8",124721583,124722737,"+",0,"NA","promoter-TSS (NM_145607)","promoter-TSS (NM_145607)",21,"NM_026855",68865,"Mm.22779","NM_026855","ENSMUSG00000031982","Arv1","1110067L22Rik|AI461928|AW121084","ARV1 homolog (yeast)","protein-coding"]
[1029,"chr11",23633245,23634093,"+",0,"NA","promoter-TSS (NM_027860)","promoter-TSS (NM_027860)",-38,"NM_027860",71675,"Mm.48031","NM_027860","ENSMUSG00000042208","0610010F05Rik","Kiaa1841|mKIAA1841","RIKEN cDNA 0610010F05 gene","protein-coding"]
[5,"chr1",6213337,6215740,"+",0,"NA","promoter-TSS (NM_009826)","promoter-TSS (NM_009826)",-124,"NM_009826",12421,"Mm.293811","NM_009826","ENSMUSG00000025907","Rb1cc1","2900055E04Rik|5930404L04Rik|Cc1|FIP200|LaXp180","RB1-inducible coiled-coil 1","protein-coding"]
[1957,"chr12",108178578,108180367,"+",0,"NA","promoter-TSS (NM_009832)","promoter-TSS (NM_009832)",-188,"NM_028262",52690,"Mm.159185","NM_028262","ENSMUSG00000056770","Setd3","2610102I01Rik|2610305M23Rik|6030490B17Rik|D12Ertd771e","SET domain containing 3","protein-coding"]
[4006,"chr19",4476521,4478396,"+",0,"NA","promoter-TSS (NM_134164)","promoter-TSS (NM_134164)",-315,"NM_134164",171180,"Mm.262270","NM_134164","ENSMUSG00000049303","Syt12","-","synaptotagmin XII","protein-coding"]
[3766,"chr18",10724933,10727358,"+",0,"NA","5' UTR (NM_144860, exon 1 of 21)","5' UTR (NM_144860, exon 1 of 21)",520,"NM_144860",225164,"Mm.21500","NM_144860","ENSMUSG00000024294","Mib1","DIP-1|E430019M12Rik|Mib|mKIAA1323","mindbomb homolog 1 (Drosophila)","protein-coding"]
[299,"chr1",131910476,131912418,"+",0,"NA","intron (NM_001145804, intron 1 of 6)","intron (NM_001145804, intron 1 of 6)",989,"NM_001145804",98415,"Mm.246869","NM_175294","ENSMUSG00000026434","Nucks1","2700010L10Rik|8430423A01Rik|AI647518|C78391|Nucks","nuclear casein kinase and cyclin-dependent kinase substrate 1","protein-coding"]
[7643,"chr7",130263121,130267144,"+",0,"NA","intron (NM_010207, intron 1 of 17)","CpG",1676,"NM_010207",14183,"Mm.16340","NM_010207","ENSMUSG00000030849","Fgfr2","AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs","fibroblast growth factor receptor 2","protein-coding"]
[7333,"chr7",46916313,46920443,"+",0,"NA","intron (NM_021884, intron 1 of 9)","intron (NM_021884, intron 1 of 9)",1552,"NM_021884",22088,"Mm.241334","NM_021884","ENSMUSG00000014402","Tsg101","AI255943|CC2","tumor susceptibility gene 101","protein-coding"]
[2815,"chr15",79062429,79062780,"+",0,"NA","exon (NM_144849, exon 1 of 8)","exon (NM_144849, exon 1 of 8)",255,"NM_144849",223690,"Mm.24262","NM_144849","ENSMUSG00000033055","Ankrd54","C730048E16Rik|EST1068184|EST475269|Liar","ankyrin repeat domain 54","protein-coding"]
[7568,"chr7",122020749,122021106,"+",0,"NA","intron (NM_028758, intron 1 of 16)","CpG",271,"NM_028758",74105,"Mm.29619","NM_028758","ENSMUSG00000030872","Gga2","1200007E24Rik|mKIAA1080","golgi associated, gamma adaptin ear containing, ARF binding protein 2","protein-coding"]
[2751,"chr15",74708751,74709596,"+",0,"NA","promoter-TSS (NR_033197)","promoter-TSS (NR_033197)",12,"NR_033197",66769,"Mm.482908","NM_025756","ENSMUSG00000044276","4933427E11Rik","-","RIKEN cDNA 4933427E11 gene","ncRNA"]
[4719,"chr2",121413027,121414945,"+",0,"NA","promoter-TSS (NM_007952)","promoter-TSS (NM_007952)",84,"NM_007952",14827,"Mm.263177","NM_007952","ENSMUSG00000027248","Pdia3","58kDa|ERp57|ERp60|ERp61|Erp|Grp58|PDI|PDI-Q2|PI-PLC|PLC[a]|Plca","protein disulfide isomerase associated 3","protein-coding"]
[673,"chr10",63022673,63025677,"+",0,"NA","promoter-TSS (NM_001079824)","promoter-TSS (NM_001079824)",-326,"NM_001079824",432467,"Mm.274784","NM_001079824","ENSMUSG00000020069","Hnrnph3","AA693301|AI666703|Hnrph3","heterogeneous nuclear ribonucleoprotein H3","protein-coding"]
[1947,"chr12",103433641,103435033,"+",0,"NA","5' UTR (NM_026790, exon 1 of 7)","5' UTR (NM_026790, exon 1 of 7)",148,"NM_194069",52668,"Mm.2121","NM_026790","ENSMUSG00000064215","Ifi27","1110013J02Rik|2900026P10Rik|D12Ertd647e|ISG12a|Ifi27l1","interferon, alpha-inducible protein 27","protein-coding"]
[25,"chr1",19207432,19213279,"+",0,"NA","intron (NM_009334, intron 1 of 6)","intron (NM_009334, intron 1 of 6)",1441,"NM_001286340",21419,"Mm.137021","NM_009334","ENSMUSG00000025927","Tfap2b","AI606113|AP-2(beta)|E130018K07Rik|Tcfap2b","transcription factor AP-2 beta","protein-coding"]
[1253,"chr11",70763951,70764908,"+",0,"NA","promoter-TSS (NM_177565)","promoter-TSS (NM_177565)",-18,"NM_177565",193043,"Mm.40966","NM_177565","ENSMUSG00000043602","Zfp3","AI854635|B230309J24|Fnp-1|Zfp-3","zinc finger protein 3","protein-coding"]
[5941,"chr4",141444390,141447468,"+",0,"NA","intron (NM_009541, intron 1 of 15)","intron (NM_009541, intron 1 of 15)",1256,"NM_009541",22642,"Mm.389590","NM_009541","ENSMUSG00000006215","Zbtb17","AA589413|Lp-1|Miz1|Zfp100|mZ13","zinc finger and BTB domain containing 17","protein-coding"]
[1730,"chr12",16589376,16589727,"+",0,"NA","intron (NM_001130412, intron 1 of 20)","intron (NM_001130412, intron 1 of 20)",219,"NM_015763",14245,"Mm.153625","NM_015763","ENSMUSG00000020593","Lpin1","4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188","lipin 1","protein-coding"]
[3623,"chr17",51831969,51832910,"+",0,"NA","intron (NM_001163632, intron 1 of 10)","CpG",208,"NM_009122",20230,"Mm.311655","NM_009122","ENSMUSG00000023927","Satb1","2610306G12Rik|AW413156","special AT-rich sequence binding protein 1","protein-coding"]
[6259,"chr5",91960573,91961403,"+",0,"NA","non-coding (NR_073442, exon 2 of 10)","non-coding (NR_073442, exon 2 of 10)",1568,"NR_073442",68098,"Mm.159453","NM_026557","ENSMUSG00000029397","Rchy1","ARNIP|CHIMP|Pirh2|Zfp363|Znf363","ring finger and CHY zinc finger domain containing 1","protein-coding"]
[4163,"chr19",28988750,28991319,"+",0,"NA","promoter-TSS (NM_025950)","promoter-TSS (NM_025950)",-318,"NM_001302382",67072,"Mm.78875","NM_025950",null,"Cdc37l1","2700033A15Rik|BB159850|Cdc37l|Harc","cell division cycle 37-like 1","protein-coding"]
[3505,"chr17",34643549,34645450,"+",0,"NA","promoter-TSS (NM_019873)","promoter-TSS (NM_019873)",-384,"NM_019873",56299,"Mm.10025","NM_019873","ENSMUSG00000033739","Fkbpl","DIR1|NG7|Ppiase-X|Wisp39","FK506 binding protein-like","protein-coding"]
[6839,"chr6",86732808,86734283,"+",0,"NA","promoter-TSS (NM_011818)","promoter-TSS (NM_011818)",-167,"NM_011818",23885,"Mm.321452","NM_011818","ENSMUSG00000001157","Gmcl1","2810049L19Rik|Gcl|mglc-1","germ cell-less homolog 1 (Drosophila)","protein-coding"]
[892,"chr10",123075531,123077938,"+",0,"NA","promoter-TSS (NM_001163024)","promoter-TSS (NM_001163024)",-229,"NM_001163025",67074,"Mm.169924","NM_153395","ENSMUSG00000034602","Mon2","2610528O22Rik|AW495628|Sf21|mKIAA1040","MON2 homolog (yeast)","protein-coding"]
[546,"chr10",17721680,17724306,"+",0,"NA","promoter-TSS (NM_010828)","promoter-TSS (NM_010828)",-235,"NM_010828",17684,"Mm.272321","NM_010828","ENSMUSG00000039910","Cited2","AI835299|ER154-like|Mrg1|Msg2|p35srj","Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2","protein-coding"]
[6636,"chr6",11905569,11908304,"+",0,"NA","intron (NM_010886, intron 1 of 3)","intron (NM_010886, intron 1 of 3)",510,"NM_010886",17992,"Mm.415865","NM_010886","ENSMUSG00000029632","Ndufa4","MLRQ","NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4","protein-coding"]
[1833,"chr12",71888024,71890952,"+",0,"NA","promoter-TSS (NM_001286452)","promoter-TSS (NM_001286452)",-55,"NM_001286452",208846,"Mm.87417","NM_026102","ENSMUSG00000034574","Daam1","-","dishevelled associated activator of morphogenesis 1","protein-coding"]
[3566,"chr17",42689295,42693169,"+",0,"NA","intron (NM_001289500, intron 1 of 9)","intron (NM_001289500, intron 1 of 9)",1052,"NM_001289501",78249,"Mm.66217","NM_030067","ENSMUSG00000023918","Adgrf4","4632435A09Rik|AV239010|Gpr115","adhesion G protein-coupled receptor F4","protein-coding"]
[529,"chr10",8518150,8519423,"+",0,"NA","promoter-TSS (NM_177387)","promoter-TSS (NM_177387)",39,"NM_177387",338362,"Mm.41163","NM_177387","ENSMUSG00000047712","Ust","D930010O20Rik|UA2OST","uronyl-2-sulfotransferase","protein-coding"]
[987,"chr11",6412472,6417409,"+",0,"NA","promoter-TSS (NM_008907)","promoter-TSS (NM_008907)",-930,"NM_008907",268373,"Mm.5246","NM_008907",null,"Ppia","2700098C05|Cphn|CyP-18|CypA","peptidylprolyl isomerase A","protein-coding"]
[4122,"chr19",10688125,10692385,"+",0,"NA","intron (NM_181403, intron 1 of 4)","intron (NM_181403, intron 1 of 4)",1440,"NM_181403",107305,"Mm.19091","NM_181403","ENSMUSG00000048832","Vps37c","5730409F24Rik|AU042646","vacuolar protein sorting 37C (yeast)","protein-coding"]
[5959,"chr4",147868147,147869359,"+",0,"NA","promoter-TSS (NM_001025365)","promoter-TSS (NM_001025365)",-34,"NM_001025365",28010,"Mm.250504","NM_133873","ENSMUSG00000029022","Miip","AA553001|AI853621|D4Wsu114e|IIP45","migration and invasion inhibitory protein","protein-coding"]
[7292,"chr7",44815106,44818538,"+",0,"NA","promoter-TSS (NR_033136)","promoter-TSS (NR_033136)",-164,"NR_033136",107503,"Mm.389890","NM_030693","ENSMUSG00000038539","Atf5","AFTA|Atf7|Atfx|ODA-10","activating transcription factor 5","protein-coding"]
[1340,"chr11",80300908,80302707,"+",0,"NA","intron (NM_139228, intron 1 of 8)","intron (NM_139228, intron 1 of 8)",895,"NM_139228",246104,"Mm.194148","NM_139228","ENSMUSG00000017692","Rhbdl3","AI847581|Rhbdl4|Rhomr1|Vrho","rhomboid, veinlet-like 3 (Drosophila)","protein-coding"]
[4389,"chr2",25621623,25621939,"+",0,"NA","5' UTR (NM_001109993, exon 1 of 4)","5' UTR (NM_001109993, exon 1 of 4)",221,"NM_001040130",51875,"Mm.271147","NM_001040130","ENSMUSG00000026939","Tmem141","1110065P14Rik|AI663999|D2Ertd217e","transmembrane protein 141","protein-coding"]
[7592,"chr7",126775514,126778932,"+",0,"NA","intron (NM_026875, intron 1 of 4)","CpG",248,"NM_025347",66090,"Mm.27114","NM_025347","ENSMUSG00000042675","Ypel3","0610043B10Rik|1190001G19Rik|Suap","yippee-like 3 (Drosophila)","protein-coding"]
[147,"chr1",65177810,65179726,"+",0,"NA","intron (NM_001111320, intron 1 of 8)","intron (NM_001111320, intron 1 of 8)",374,"NM_010497",15926,"Mm.9925","NM_010497","ENSMUSG00000025950","Idh1","AI314845|AI788952|E030024J03Rik|Id-1|Idh-1|Idpc","isocitrate dehydrogenase 1 (NADP+), soluble","protein-coding"]
[5211,"chr3",93551554,93557948,"+",0,"NA","promoter-TSS (NM_009112)","promoter-TSS (NM_009112)",-366,"NM_009112",20194,"Mm.1","NM_009112","ENSMUSG00000041959","S100a10","42C|AA409961|AL024248|CAL12|CLP11|Cal1l|p10|p11","S100 calcium binding protein A10 (calpactin)","protein-coding"]
[1291,"chr11",75732505,75734107,"+",0,"NA","intron (NM_009536, intron 1 of 5)","CpG",419,"NM_009536",22627,"Mm.234700","NM_009536","ENSMUSG00000020849","Ywhae","AU019196","tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide","protein-coding"]
[2601,"chr14",99045389,99047125,"+",0,"NA","promoter-TSS (NM_175245)","promoter-TSS (NM_175245)",-120,"NM_175265",77744,"Mm.23503","NM_175265","ENSMUSG00000022070","Bora","6720463M24Rik|AI317232","bora, aurora kinase A activator","protein-coding"]
[5346,"chr3",122919493,122925484,"+",0,"NA","intron (NR_046036, intron 1 of 5)","intron (NR_046036, intron 1 of 5)",1628,"NR_046036",74057,"Mm.159123","NR_046036","ENSMUSG00000097852","4933405D12Rik","-","RIKEN cDNA 4933405D12 gene","ncRNA"]
[974,"chr11",5541655,5542208,"+",0,"NA","exon (NM_134033, exon 1 of 5)","exon (NM_134033, exon 1 of 5)",286,"NM_134033",104479,"Mm.210403","NM_134033","ENSMUSG00000020482","Ccdc117","1110004K02Rik|1700026O03Rik|AU018638|AU042822|AV173073|BC018601","coiled-coil domain containing 117","protein-coding"]
[8016,"chr8",85035772,85038499,"+",0,"NA","promoter-TSS (NM_001122843)","promoter-TSS (NM_001122843)",-33,"NM_001122843",212999,"Mm.220357","NM_145390","ENSMUSG00000031691","Tnpo2","1110034O24Rik|AA414969|AI464345|AI852433|IPO3|Knpb2b|Kpnb2b|TRN2","transportin 2 (importin 3, karyopherin beta 2b)","protein-coding"]
[6278,"chr5",99977167,99979906,"+",0,"NA","exon (NM_007516, exon 1 of 8)","exon (NM_007516, exon 1 of 8)",402,"NM_001077266",11991,"Mm.150231","NM_007516","ENSMUSG00000000568","Hnrnpd","Auf1|Hnrpd","heterogeneous nuclear ribonucleoprotein D","protein-coding"]
[117,"chr1",58504641,58505370,"+",0,"NA","5' UTR (NM_001271526, exon 1 of 18)","5' UTR (NM_001271526, exon 1 of 18)",104,"NM_001271526",18393,"Mm.3411","NM_008765","ENSMUSG00000026037","Orc2","AU041563|Orc2l","origin recognition complex, subunit 2","protein-coding"]
[7215,"chr7",29905850,29907051,"+",0,"NA","promoter-TSS (NM_011754)","promoter-TSS (NM_011754)",-59,"NR_106128",102465770,null,"NR_106128","ENSMUSG00000098873","Mir7668","Gm27961|mmu-mir-7668","microRNA 7668","ncRNA"]
[8658,"chr9",108301910,108308698,"+",0,"NA","promoter-TSS (NM_016802)","promoter-TSS (NM_016802)",855,"NM_133986",102791,"Mm.24670","NM_133986","ENSMUSG00000039461","Tcta","9130410M22Rik|AW553637|C85065|Tctal","T cell leukemia translocation altered gene","protein-coding"]
[2172,"chr13",56702570,56705251,"+",0,"NA","intron (NM_001164042, intron 1 of 6)","CpG",242,"NM_001164042",17129,"Mm.272920","NM_008541","ENSMUSG00000021540","Smad5","1110051M15Rik|AI451355|Dwf-C|Madh5|MusMLP","SMAD family member 5","protein-coding"]
[5333,"chr3",116964008,116970080,"+",0,"NA","intron (NM_023245, intron 1 of 7)","intron (NM_023245, intron 1 of 7)",-1223,"NR_040596",74654,"Mm.410820","NR_040596","ENSMUSG00000080907","4930455H04Rik","-","RIKEN cDNA 4930455H04 gene","ncRNA"]
[8050,"chr8",94178190,94180798,"+",0,"NA","intron (NM_013602, intron 1 of 2)","CpG",405,"NM_013602",17748,"Mm.192991","NM_013602","ENSMUSG00000031765","Mt1","MT-I|Mt-1","metallothionein 1","protein-coding"]
[290,"chr1",130712505,130718110,"+",0,"NA","promoter-TSS (NM_001162416)","promoter-TSS (NM_001162416)",514,"NR_027859",18640,"Mm.249861","NM_008825","ENSMUSG00000026409","Pfkfb2","4930568D07Rik","6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2","protein-coding"]
[5706,"chr4",116708095,116708329,"+",0,"NA","promoter-TSS (NM_026714)","promoter-TSS (NM_026714)",173,"NM_025962",67096,"Mm.252785","NM_025962","ENSMUSG00000028690","Mmachc","1810037K07Rik","methylmalonic aciduria cblC type, with homocystinuria","protein-coding"]
[8637,"chr9",107541578,107542879,"+",0,"NA","promoter-TSS (NM_019720)","promoter-TSS (NM_019720)",19,"NM_018879",56032,"Mm.11337","NM_018879","ENSMUSG00000010057","Nprl2","2810446G01Rik|G21|NPR2L|Tusc4","nitrogen permease regulator-like 2","protein-coding"]
[4529,"chr2",60209002,60213552,"+",0,"NA","intron (NM_020575, intron 1 of 9)","B1F1|SINE|Alu",1341,"NM_020575",57438,"Mm.260635","NM_020575","ENSMUSG00000026977","2007-03-01","Axo|Axot|Gtrgeo17","membrane-associated ring finger (C3HC4) 7","protein-coding"]
[2593,"chr14",79397589,79398325,"+",0,"NA","5' UTR (NM_145960, exon 1 of 11)","5' UTR (NM_145960, exon 1 of 11)",185,"NM_145960",211253,"Mm.35306","NM_145960","ENSMUSG00000022022","Mtrf1","A830062K05Rik|MtRF-1","mitochondrial translational release factor 1","protein-coding"]
[2920,"chr15",98608855,98610325,"+",0,"NA","Intergenic","CpG",-1957,"NM_007405",11512,"Mm.157091","NM_007405","ENSMUSG00000022994","Adcy6","AC6|mKIAA0422","adenylate cyclase 6","protein-coding"]
[4512,"chr2",49787275,49788275,"+",0,"NA","promoter-TSS (NM_027990)","promoter-TSS (NM_027990)",89,"NM_027990",71897,"Mm.41381","NM_027990","ENSMUSG00000026765","Lypd6b","2310010M24Rik|AW049525","LY6/PLAUR domain containing 6B","protein-coding"]
[3110,"chr16",29544450,29544713,"+",0,"NA","intron (NM_001164613, intron 1 of 21)","intron (NM_001164613, intron 1 of 21)",283,"NM_001164613",224079,"Mm.54954","NM_172613","ENSMUSG00000038094","Atp13a4","4631413J11Rik|4832416L12|9330174J19Rik","ATPase type 13A4","protein-coding"]
[4644,"chr2",104847951,104851778,"+",0,"NA","promoter-TSS (NM_178695)","promoter-TSS (NM_178695)",-14,"NM_178695",228413,"Mm.259609","NM_178695","ENSMUSG00000027171","Prrg4","9930111I18Rik|TMG4","proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)","protein-coding"]
[1024,"chr11",22972458,22973654,"+",0,"NA","5' UTR (NM_011663, exon 1 of 1)","5' UTR (NM_011663, exon 1 of 1)",1051,"NM_011663",22183,"Mm.29542","NM_011663",null,"Zrsr1","D11Ncvs75|Irlgs2|SP2|U2af1-rs1|U2afbp-rs","zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1","protein-coding"]
[2871,"chr15",84922526,84924662,"+",0,"NA","5' UTR (NM_016714, exon 1 of 8)","5' UTR (NM_016714, exon 1 of 8)",166,"NM_016714",18141,"Mm.28379","NM_016714","ENSMUSG00000016619","Nup50","1700030K07Rik|AI413123|Npap60","nucleoporin 50","protein-coding"]
[13,"chr1",10037396,10040254,"+",0,"NA","promoter-TSS (NM_013715)","promoter-TSS (NM_013715)",607,"NM_026493",211660,"Mm.244046","NM_026493","ENSMUSG00000056763","Cspp1","2310020J12Rik|4930413O22Rik|AA387550|BC055915|Cspp2|Cspp3","centrosome and spindle pole associated protein 1","protein-coding"]
[1514,"chr11",101423932,101425638,"+",0,"NA","promoter-TSS (NM_172566)","promoter-TSS (NM_172566)",-300,"NM_172566",217201,"Mm.305941","NM_172566","ENSMUSG00000035007","Rundc1","AW125546|D930024B17","RUN domain containing 1","protein-coding"]
[4372,"chr2",25195637,25198016,"+",0,"NA","promoter-TSS (NM_146115)","promoter-TSS (NM_146115)",-13,"NM_146115",227612,"Mm.119747","NM_146115","ENSMUSG00000059555","Tor4a","A830007P12Rik","torsin family 4, member A","protein-coding"]
[4867,"chr2",155380260,155383133,"+",0,"NA","promoter-TSS (NM_178111)","promoter-TSS (NM_178111)",-160,"NM_178111",68728,"Mm.293605","NM_178111","ENSMUSG00000038375","Trp53inp2","1110029F20Rik|Tp53inp2","transformation related protein 53 inducible nuclear protein 2","protein-coding"]
[443,"chr1",177793284,177797111,"+",0,"NA","intron (NM_007422, intron 1 of 12)","intron (NM_007422, intron 1 of 12)",1312,"NM_007422",11566,"Mm.338021","NM_007422","ENSMUSG00000015961","Adss","AI314886|AS|Adss2","adenylosuccinate synthetase, non muscle","protein-coding"]
[2234,"chr13",75707557,75709836,"+",0,"NA","intron (NM_138953, intron 1 of 11)","intron (NM_138953, intron 1 of 11)",1212,"NM_138953",192657,"Mm.21288","NM_138953","ENSMUSG00000001542","Ell2","-","elongation factor RNA polymerase II 2","protein-coding"]
[7449,"chr7",97696195,97697225,"+",0,"NA","promoter-TSS (NM_023671)","promoter-TSS (NM_023671)",53,"NM_023671",12729,"Mm.21482","NM_023671",null,"Clns1a","2610036D06Rik|2610100O04Rik|Clci|Clcni|ICLN","chloride channel, nucleotide-sensitive, 1A","protein-coding"]
[6854,"chr6",88465044,88466284,"+",0,"NA","exon (NM_019685, exon 1 of 11)","exon (NM_019685, exon 1 of 11)",241,"NM_019685",56505,"Mm.42195","NM_019685","ENSMUSG00000030079","Ruvbl1","2510009G06Rik|Pontin52|Tip49a","RuvB-like protein 1","protein-coding"]
[846,"chr10",100486587,100487986,"+",0,"NA","promoter-TSS (NM_001110013)","promoter-TSS (NM_001110013)",61,"NM_001033332",237500,"Mm.296805","NM_001033332","ENSMUSG00000036676","Tmtc3","9130014E20Rik|B130008E12Rik|mSmile","transmembrane and tetratricopeptide repeat containing 3","protein-coding"]
[7636,"chr7",128417838,128418676,"+",0,"NA","promoter-TSS (NM_026418)","promoter-TSS (NM_026418)",-85,"NM_026418",67865,"Mm.18635","NM_026418","ENSMUSG00000030844","Rgs10","2310010N19Rik","regulator of G-protein signalling 10","protein-coding"]
[6445,"chr5",124578657,124579803,"+",0,"NA","promoter-TSS (NM_145371)","promoter-TSS (NM_145371)",82,"NM_181410",209357,"Mm.185467","NM_181410","ENSMUSG00000029387","Gtf2h3","34kDa|5033417D07Rik|BTF2|BTF2 p34|C730029A10|D5Ertd679e|TFIIH","general transcription factor IIH, polypeptide 3","protein-coding"]
[5950,"chr4",142083642,142085584,"+",0,"NA","promoter-TSS (NM_145402)","promoter-TSS (NM_145402)",-309,"NM_145402",214359,"Mm.27587","NM_145402","ENSMUSG00000040616","Tmem51","BC003277","transmembrane protein 51","protein-coding"]
[7432,"chr7",90129130,90131993,"+",0,"NA","promoter-TSS (NR_046007)","promoter-TSS (NR_046007)",329,"NM_001252520",233489,"Mm.235175","NM_146194","ENSMUSG00000039361","Picalm","CALM|CLTH|PAP180|fit-1|fit1|mKIAA4114","phosphatidylinositol binding clathrin assembly protein","protein-coding"]
[4624,"chr2",94156987,94158931,"+",0,"NA","promoter-TSS (NM_019657)","promoter-TSS (NM_019657)",-50,"NM_019657",56348,"Mm.22505","NM_019657","ENSMUSG00000027195","Hsd17b12","2610510O05Rik|AI172963|KIK-I|Kik1","hydroxysteroid (17-beta) dehydrogenase 12","protein-coding"]
[8768,"chrX",7883686,7884872,"+",0,"NA","promoter-TSS (NM_078484)","promoter-TSS (NM_078484)",35,"NM_078484",22232,"Mm.214976","NM_078484","ENSMUSG00000031156","Slc35a2","AI327289|Had-1|Had1|Sfc8|UGT|Ugalt","solute carrier family 35 (UDP-galactose transporter), member A2","protein-coding"]
[7141,"chr7",24609566,24613003,"+",0,"NA","promoter-TSS (NM_001102613)","promoter-TSS (NM_001102613)",-44,"NM_001102613",232970,"Mm.333663","NM_001102613","ENSMUSG00000074277","Phldb3","EG232970|ENSMUSG00000061511|Gm10102","pleckstrin homology-like domain, family B, member 3","protein-coding"]
[6522,"chr5",137775967,137779798,"+",0,"NA","Intergenic","B4A|SINE|B4",-1036,"NM_027242",69871,"Mm.276058","NM_027242","ENSMUSG00000029725","Ppp1r35","2010007H12Rik|2010011D20Rik|AL024004","protein phosphatase 1, regulatory subunit 35","protein-coding"]
[4284,"chr19",55098497,55103656,"+",0,"NA","Intergenic","L1MEc|LINE|L1",-1629,"NM_008149",14732,"Mm.210196","NM_008149","ENSMUSG00000024978","Gpam","GPAT|GPAT1","glycerol-3-phosphate acyltransferase, mitochondrial","protein-coding"]
[135,"chr1",60408849,60410134,"+",0,"NA","promoter-TSS (NM_001198571)","promoter-TSS (NM_001198571)",-128,"NM_001198571",329165,"Mm.212066","NM_198127","ENSMUSG00000026782","Abi2","8430425M24Rik|AI839867|C130078H13","abl-interactor 2","protein-coding"]
[145,"chr1",64736577,64738853,"+",0,"NA","promoter-TSS (NM_022721)","promoter-TSS (NM_022721)",35,"NM_001042659",14367,"Mm.150813","NM_022721","ENSMUSG00000045005","Fzd5","5330434N09Rik|AI427138|Fz-5|Fz5|mFz5","frizzled homolog 5 (Drosophila)","protein-coding"]
[8472,"chr9",63757055,63758696,"+",0,"NA","5' UTR (NM_016769, exon 1 of 9)","5' UTR (NM_016769, exon 1 of 9)",119,"NM_016769",17127,"Mm.7320","NM_016769","ENSMUSG00000032402","Smad3","AU022421|Madh3","SMAD family member 3","protein-coding"]
[7916,"chr8",70659369,70660840,"+",0,"NA","promoter-TSS (NM_023217)","promoter-TSS (NM_023217)",-366,"NM_023217",66522,"Mm.154906","NM_023217","ENSMUSG00000056204","Pgpep1","2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp","pyroglutamyl-peptidase I","protein-coding"]
[8183,"chr8",120535794,120540490,"+",0,"NA","promoter-TSS (NR_106159)","promoter-TSS (NR_106159)",-554,"NR_106159",102466849,null,"NR_106159","ENSMUSG00000098280","Mir7687","Gm27573|mmu-mir-7687","microRNA 7687","ncRNA"]
[4605,"chr2",91256874,91258354,"+",0,"NA","intron (NM_028733, intron 1 of 10)","intron (NM_028733, intron 1 of 10)",285,"NM_028733",80708,"Mm.236650","NM_028733","ENSMUSG00000027257","Pacsin3","4921507A02Rik|6330413E15Rik|AW413130","protein kinase C and casein kinase substrate in neurons 3","protein-coding"]
[6919,"chr6",117937201,117938210,"+",0,"NA","promoter-TSS (NM_033648)","promoter-TSS (NM_033648)",-370,"NM_001173372",108017,"Mm.250392","NM_033648","ENSMUSG00000004988","Fxyd4","0610008I02Rik|AI267073|Chif","FXYD domain-containing ion transport regulator 4","protein-coding"]
[3064,"chr16",18234389,18235980,"+",0,"NA","promoter-TSS (NM_172151)","promoter-TSS (NM_172151)",-48,"NM_172151",27801,"Mm.326263","NM_172151","ENSMUSG00000060166","Zdhhc8","D16H22S1738E|DHHC-8|E330009O14Rik|Op53c05|ZDHHCL1","zinc finger, DHHC domain containing 8","protein-coding"]
[7450,"chr7",97843133,97843730,"+",0,"NA","intron (NM_011035, intron 1 of 14)","intron (NM_011035, intron 1 of 14)",492,"NM_011035",18479,"Mm.260227","NM_011035","ENSMUSG00000030774","Pak1","AW045634|PAK-1|Paka","p21 protein (Cdc42/Rac)-activated kinase 1","protein-coding"]
[6174,"chr5",43231974,43236364,"+",0,"NA","exon (NM_001177379, exon 1 of 11)","exon (NM_001177379, exon 1 of 11)",706,"NM_001177379",231207,"Mm.7233","NM_175937","ENSMUSG00000039782","Cpeb2","A630055H10Rik|Cpe-bp2","cytoplasmic polyadenylation element binding protein 2","protein-coding"]
[8601,"chr9",102717259,102719066,"+",0,"NA","intron (NM_019764, intron 1 of 9)","CpG",358,"NM_019764",56332,"Mm.21145","NM_019764","ENSMUSG00000032531","Amotl2","AW549739|C79691|Lccp|MASCOT|mKIAA0989","angiomotin-like 2","protein-coding"]
[2129,"chr13",49307049,49308766,"+",0,"NA","intron (NM_015759, intron 1 of 17)","B4|SINE|B4",1301,"NM_015759",30938,"Mm.291089","NM_015759","ENSMUSG00000037946","Fgd3","5830461L01Rik|ZFYVE5","FYVE, RhoGEF and PH domain containing 3","protein-coding"]
[1040,"chr11",29546596,29548793,"+",0,"NA","promoter-TSS (NM_028504)","promoter-TSS (NM_028504)",-256,"NM_028504",73324,"Mm.69388","NM_028504","ENSMUSG00000020461","Clhc1","1700034F02Rik","clathrin heavy chain linker domain containing 1","protein-coding"]
[5766,"chr4",124714920,124715188,"+",0,"NA","intron (NM_029157, intron 1 of 16)","CpG",193,"NM_029157",75062,"Mm.25779","NM_029157","ENSMUSG00000028902","Sf3a3","4930512K19Rik|60kDa","splicing factor 3a, subunit 3","protein-coding"]
[152,"chr1",66861885,66864814,"+",0,"NA","promoter-TSS (NM_007381)","promoter-TSS (NM_007381)",-40,"NM_007381",11363,"Mm.2445","NM_007381","ENSMUSG00000026003","Acadl","AA960361|AU018452|C79855|LCAD","acyl-Coenzyme A dehydrogenase, long-chain","protein-coding"]
[1419,"chr11",95666280,95667962,"+",0,"NA","intron (NM_008831, intron 1 of 6)","intron (NM_008831, intron 1 of 6)",164,"NM_008831",18673,"Mm.263862","NM_008831","ENSMUSG00000038845","Phb","Bap32","prohibitin","protein-coding"]
[2189,"chr13",64312138,64313234,"+",0,"NA","promoter-TSS (NM_025370)","promoter-TSS (NM_025370)",24,"NM_025370",66129,"Mm.491110","NM_025370","ENSMUSG00000021482","Aaed1","1110018J18Rik|AI849003","AhpC/TSA antioxidant enzyme domain containing 1","protein-coding"]
[5850,"chr4",133011267,133014781,"+",0,"NA","intron (NM_146155, intron 2 of 6)","intron (NM_146155, intron 2 of 6)",1518,"NM_146155",230793,"Mm.31816","NM_146155","ENSMUSG00000037692","Ahdc1","D030015G18Rik","AT hook, DNA binding motif, containing 1","protein-coding"]
[6975,"chr6",127453665,127454077,"+",0,"NA","intron (NM_181402, intron 1 of 8)","CpG",148,"NM_181402",101187,"Mm.110818","NM_181402","ENSMUSG00000037997","Parp11","5330431N24Rik|AI851877|ARTD11|HIN1L","poly (ADP-ribose) polymerase family, member 11","protein-coding"]
[4824,"chr2",150749140,150749521,"+",0,"NA","intron (NM_172117, intron 1 of 13)","CpG",249,"NM_172117",12497,"Mm.275524","NM_172117","ENSMUSG00000033068","Entpd6","2700026H11Rik|Cd39l2|NTPDase-6","ectonucleoside triphosphate diphosphohydrolase 6","protein-coding"]
[6369,"chr5",115565057,115565673,"+",0,"NA","intron (NM_172719, intron 1 of 57)","CpG",102,"NM_172719",231659,"Mm.153014","NM_172719","ENSMUSG00000041638","Gcn1l1","4932409G22|AL022764|G431004K08Rik|GCN1L|mKIAA0219","GCN1 general control of amino-acid synthesis 1-like 1 (yeast)","protein-coding"]
[1148,"chr11",59162705,59164539,"+",0,"NA","exon (NM_001270791, exon 1 of 2)","exon (NM_001270791, exon 1 of 2)",123,"NM_001270791",216792,"Mm.266175","NM_173785","ENSMUSG00000049287","Iba57","4930543L23Rik|A230051G13Rik|C1orf69","IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)","protein-coding"]
[4214,"chr19",41829323,41830623,"+",0,"NA","promoter-TSS (NM_008043)","promoter-TSS (NM_008043)",3,"NM_008043",14296,"Mm.4573","NM_008043",null,"Frat1","AW060382","frequently rearranged in advanced T cell lymphomas","protein-coding"]
[6615,"chr5",150664719,150665716,"+",0,"NA","intron (NM_201369, intron 1 of 5)","CpG",395,"NM_201369",381695,"Mm.246934","NM_201369","ENSMUSG00000029655","N4bp2l2","2700092H06Rik|zag1","NEDD4 binding protein 2-like 2","protein-coding"]
[3570,"chr17",43155882,43157153,"+",0,"NA","intron (NR_045154, intron 1 of 5)","Lx8|LINE|L1",1774,"NR_045155",545207,"Mm.329050","NR_045153",null,"E130008D07Rik","-","RIKEN cDNA E130008D07 gene","ncRNA"]
[5427,"chr4",4792101,4793335,"+",0,"NA","intron (NM_177730, intron 1 of 4)","CpG",588,"NM_177730",242291,"Mm.218889","NM_177730",null,"Impad1","1110001C20Rik|AA408880|AI451589|AL022796|B230207P20|Jaws|gPAPP","inositol monophosphatase domain containing 1","protein-coding"]
[568,"chr10",22731083,22732122,"+",0,"NA","promoter-TSS (NM_011603)","promoter-TSS (NM_011603)",-155,"NM_011603",237336,"Mm.86670","NM_011603","ENSMUSG00000071359","Tbpl1","4732475G08|AW011832|AW491032|D18347|STD|TLF|TRF2|TRP|Tlp","TATA box binding protein-like 1","protein-coding"]
[2668,"chr15",27466084,27467278,"+",0,"NA","promoter-TSS (NM_020332)","promoter-TSS (NM_020332)",4,"NM_020332",11732,"Mm.265264","NM_020332","ENSMUSG00000022265","Ank","Ankh|D15Ertd221e|ank|mKIAA1581","progressive ankylosis","protein-coding"]
[6474,"chr5",134183582,134184911,"+",0,"NA","5' UTR (NM_053266, exon 1 of 16)","5' UTR (NM_053266, exon 1 of 16)",208,"NM_053266",114674,"Mm.218744","NM_053266","ENSMUSG00000015942","Gtf2ird2","1700012P16Rik","GTF2I repeat domain containing 2","protein-coding"]
[8387,"chr9",49055147,49056128,"+",0,"NA","promoter-TSS (NM_012039)","promoter-TSS (NM_012039)",56,"NM_012039",26951,"Mm.24791","NM_012039","ENSMUSG00000032264","Zw10","6330566F14Rik|MmZw10","zw10 kinetochore protein","protein-coding"]
[7681,"chr7",140941217,140942591,"+",0,"NA","intron (NM_145387, intron 1 of 13)","intron (NM_145387, intron 1 of 13)",323,"NM_145387",212974,"Mm.260139","NM_145387","ENSMUSG00000062031","Athl1","5730511L01Rik|BC023151","ATH1, acid trehalase-like 1 (yeast)","protein-coding"]
[7516,"chr7",110060506,110063472,"+",0,"NA","intron (NM_009281, intron 1 of 15)","CpG",287,"NM_009281",20841,"Mm.10815","NM_009281","ENSMUSG00000061079","Zfp143","AA959806|AU015869|D7Ertd805e|KRAB14|SBF|Staf|Zfp79|Zfp80-rs1|Znf143|pHZ-1","zinc finger protein 143","protein-coding"]
[2651,"chr15",10177812,10178975,"+",0,"NA","intron (NM_011169, intron 1 of 9)","intron (NM_011169, intron 1 of 9)",1155,"NM_011169",19116,"Mm.10516","NM_011169","ENSMUSG00000005268","Prlr","AI987712|Pr-1|Pr-3|Prlr-rs1","prolactin receptor","protein-coding"]
[6437,"chr5",124248857,124250215,"+",0,"NA","5' UTR (NM_011256, exon 1 of 25)","5' UTR (NM_011256, exon 1 of 25)",224,"NM_011256",19679,"Mm.44261","NM_011256","ENSMUSG00000029406","Pitpnm2","NIR3|RDGBA2|Rdgb2|mKIAA1457","phosphatidylinositol transfer protein, membrane-associated 2","protein-coding"]
[5177,"chr3",89457030,89459938,"+",0,"NA","promoter-TSS (NM_026784)","promoter-TSS (NM_026784)",-634,"NM_026784",68603,"Mm.34242","NM_026784","ENSMUSG00000027952","Pmvk","1110011E12Rik|2900002L22Rik|AV001327|PMK|PMKA|PMKASE","phosphomevalonate kinase","protein-coding"]
[1556,"chr11",106036958,106037621,"+",0,"NA","intron (NM_027946, intron 1 of 6)","CpG",417,"NM_027946",71833,"Mm.307455","NM_027946","ENSMUSG00000049354","Dcaf7","1700012F10Rik|2610037L01Rik|C86529|HAN11|Wdr68","DDB1 and CUL4 associated factor 7","protein-coding"]
[3682,"chr17",70990074,70994213,"+",0,"NA","Intergenic","Intergenic",-1627,"NM_023402",67938,"Mm.261329","NM_023402",null,"Myl12b","1500001M02Rik|C77744|Mylc2b|RLC-B","myosin, light chain 12B, regulatory","protein-coding"]
[1766,"chr12",35046462,35048080,"+",0,"NA","promoter-TSS (NM_001014973)","promoter-TSS (NM_001014973)",82,"NM_001014973",217463,"Mm.213991","NM_001014973","ENSMUSG00000020590","Snx13","Rgs-px1|mKIAA0713","sorting nexin 13","protein-coding"]
[7840,"chr8",41374150,41375573,"+",0,"NA","promoter-TSS (NM_019734)","promoter-TSS (NM_019734)",-164,"NM_019734",11886,"Mm.22547","NM_019734","ENSMUSG00000031591","Asah1","2310081N20Rik|AC|Asah","N-acylsphingosine amidohydrolase 1","protein-coding"]
[5841,"chr4",132507191,132514042,"+",0,"NA","promoter-TSS (NM_144907)","promoter-TSS (NM_144907)",-160,"NM_144907",230784,"Mm.23608","NM_144907",null,"Sesn2","HI95|SEST2|Ses2","sestrin 2","protein-coding"]
[8094,"chr8",105635549,105637759,"+",0,"NA","5' UTR (NM_181322, exon 1 of 12)","5' UTR (NM_181322, exon 1 of 12)",116,"NM_181322",13018,"Mm.269474","NM_181322","ENSMUSG00000005698","Ctcf","AW108038","CCCTC-binding factor","protein-coding"]
[3427,"chr17",28328113,28330221,"+",0,"NA","intron (NM_011287, intron 3 of 5)","CpG-6176",696,"NM_011287",19896,"Mm.336955","NM_011287","ENSMUSG00000037805","Rpl10a","CsA-19|Nedd6","ribosomal protein L10A","protein-coding"]
[5805,"chr4",129260843,129264423,"+",0,"NA","Intergenic","B2_Mm1a|SINE|B2",-1229,"NM_001285867",97130,"Mm.331907","NM_001033189","ENSMUSG00000050390","C77080","Kiaa1522|mKIAA1522","expressed sequence C77080","protein-coding"]
[1157,"chr11",59661809,59663934,"+",0,"NA","exon (NM_012027, exon 1 of 24)","exon (NM_012027, exon 1 of 24)",376,"NM_012027",26936,"Mm.2402","NM_012027","ENSMUSG00000005417","Mprip","9530046C02|AA536749|AI647711|C76423|RIP3|Rhoip3|mKIAA0864|p116Rip","myosin phosphatase Rho interacting protein","protein-coding"]
[5330,"chr3",116661466,116663620,"+",0,"NA","5' UTR (NM_008246, exon 1 of 12)","5' UTR (NM_008246, exon 1 of 12)",134,"NM_008246",15247,"Mm.280077","NM_008246","ENSMUSG00000089911","Hiat1","-","hippocampus abundant gene transcript 1","protein-coding"]
[1006,"chr11",17953032,17953851,"+",0,"NA","promoter-TSS (NR_131915)","promoter-TSS (NR_131915)",434,"NM_026576",68145,"Mm.178684","NM_026576","ENSMUSG00000016984","Etaa1","5730466H23Rik|AA672646","Ewing tumor-associated antigen 1","protein-coding"]
[5773,"chr4",126047127,126047491,"+",0,"NA","intron (NM_025544, intron 1 of 7)","intron (NM_025544, intron 1 of 7)",381,"NM_025544",66407,"Mm.195628","NM_025544","ENSMUSG00000028861","Mrps15","1500003E24Rik|2410002B11Rik|Mprs15","mitochondrial ribosomal protein S15","protein-coding"]
[8632,"chr9",107284200,107290651,"+",0,"NA","intron (NM_001316691, intron 1 of 7)","intron (NM_001316691, intron 1 of 7)",1971,"NM_001316691",102626,"Mm.222612","NM_178907","ENSMUSG00000032577","Mapkapk3","3PK|AI874665|MAPKAP-K3|MAPKAP3|MK-3|MK3|MapkKapk3","mitogen-activated protein kinase-activated protein kinase 3","protein-coding"]
[2069,"chr13",33934926,33936429,"+",0,"NA","promoter-TSS (NR_040707)","promoter-TSS (NR_040707)",-355,"NR_040707",68808,"Mm.443347","NR_040707","ENSMUSG00000085457","1110046J04Rik","-","RIKEN cDNA 1110046J04 gene","ncRNA"]
[1661,"chr11",119299346,119300712,"+",0,"NA","promoter-TSS (NM_138669)","promoter-TSS (NM_138669)",14,"NM_138669",192170,"Mm.197555","NM_138669","ENSMUSG00000025580","Eif4a3","2400003O03Rik|Ddx48|eIF4A-III|mKIAA0111","eukaryotic translation initiation factor 4A3","protein-coding"]
[7351,"chr7",64287265,64288453,"+",0,"NA","intron (NM_172742, intron 1 of 15)","CpG",189,"NM_172742",233315,"Mm.214959","NM_172742","ENSMUSG00000030522","Mtmr10","BB128963|C79734","myotubularin related protein 10","protein-coding"]
[5137,"chr3",87884177,87885594,"+",0,"NA","exon (NM_033573, exon 1 of 7)","exon (NM_033573, exon 1 of 7)",677,"NM_033573",94315,"Mm.35089","NM_033573","ENSMUSG00000004895","Prcc","-","papillary renal cell carcinoma (translocation-associated)","protein-coding"]
[869,"chr10",117223252,117224520,"+",0,"NA","intron (NM_026570, intron 1 of 6)","intron (NM_026570, intron 1 of 6)",621,"NM_026570",64050,"Mm.233529","NM_026570","ENSMUSG00000020171","Yeats4","4930573H17Rik|B230215M10Rik|GAS41|NuBI-1","YEATS domain containing 4","protein-coding"]
[8986,"chrY",897632,898033,"+",0,"NA","promoter-TSS (NM_011419)","promoter-TSS (NM_011419)",44,"NM_011419",20592,"Mm.262676","NM_011419",null,"Kdm5d","HY|Jarid1d|Smcy","lysine (K)-specific demethylase 5D","protein-coding"]
[1697,"chr11",121203856,121205186,"+",0,"NA","promoter-TSS (NM_001001333)","promoter-TSS (NM_001001333)",88,"NM_001001333",238023,"Mm.275130","NM_001001333","ENSMUSG00000039307","Hexdc","BC069960","hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing","protein-coding"]
[6159,"chr5",36483575,36484753,"+",0,"NA","promoter-TSS (NM_025725)","promoter-TSS (NM_025725)",121,"NM_001170454",231151,"Mm.421558","NM_001170454","ENSMUSG00000029196","Tada2b","AA474455|Gm145","transcriptional adaptor 2B","protein-coding"]
[8507,"chr9",69397602,69398500,"+",0,"NA","promoter-TSS (NM_145618)","promoter-TSS (NM_145618)",53,"NM_145618",93697,"Mm.35911","NM_145618","ENSMUSG00000032235","Ice2","B230343B06Rik|Narg2","interactor of little elongation complex ELL subunit 2","protein-coding"]
[2246,"chr13",84221691,84222914,"+",0,"NA","promoter-TSS (NM_175187)","promoter-TSS (NM_175187)",6,"NM_175187",72745,"Mm.295063","NM_175187","ENSMUSG00000035762","Tmem161b","2810446P07Rik|AI843389","transmembrane protein 161B","protein-coding"]
[1626,"chr11",116138395,116139362,"+",0,"NA","promoter-TSS (NM_024177)","promoter-TSS (NM_024177)",-10,"NM_024177",60441,"Mm.29974","NM_024177","ENSMUSG00000020775","Mrpl38","1110036N21Rik|4733401F03Rik|MRP-L3|R75240|Rpml3","mitochondrial ribosomal protein L38","protein-coding"]
[8648,"chr9",107912753,107913658,"+",0,"NA","exon (NM_009074, exon 6 of 19)","exon (NM_009074, exon 6 of 19)",-1798,"NM_001287261",19882,"Mm.3901","NM_009074","ENSMUSG00000032584","Mst1r","CD136|CDw136|Fv-2|Fv2|PTK8|Ron|STK","macrophage stimulating 1 receptor (c-met-related tyrosine kinase)","protein-coding"]
[6146,"chr5",34549653,34549942,"+",0,"NA","intron (NM_001145859, intron 1 of 12)","CpG",221,"NM_001145859",24055,"Mm.5012","NM_011893","ENSMUSG00000054520","Sh3bp2","3BP2","SH3-domain binding protein 2","protein-coding"]
[1781,"chr12",51828422,51830599,"+",0,"NA","promoter-TSS (NM_144788)","promoter-TSS (NM_144788)",26,"NM_144788",207304,"Mm.249391","NM_144788","ENSMUSG00000035247","Hectd1","A630086P08Rik|AI844876|b2b327Clo|opm","HECT domain containing 1","protein-coding"]
[7109,"chr7",19180716,19182703,"+",0,"NA","TTS (NR_029763)","TTS (NR_029763)",244,"NR_029763",724063,null,"NR_029763","ENSMUSG00000065543","Mir330","Mirn330|mir-330|mmu-mir-330","microRNA 330","ncRNA"]
[3046,"chr16",16896668,16897148,"+",0,"NA","intron (NM_176833, intron 1 of 7)","intron (NM_176833, intron 1 of 7)",439,"NM_176833",68606,"Mm.230296","NM_176833","ENSMUSG00000026181","Ppm1f","1110021B16Rik|4933427B07Rik|CaMKPase|Popx2|mKIAA0015","protein phosphatase 1F (PP2C domain containing)","protein-coding"]
[1835,"chr12",72535795,72536962,"+",0,"NA","promoter-TSS (NM_026327)","promoter-TSS (NM_026327)",21,"NM_026327",67708,"Mm.11233","NM_026327","ENSMUSG00000034501","Pcnxl4","1810048J11Rik|4932413O10|AU017192","pecanex-like 4 (Drosophila)","protein-coding"]
[7126,"chr7",19714664,19715313,"+",0,"NA","exon (NM_001109748, exon 1 of 9)","exon (NM_001109748, exon 1 of 9)",441,"NM_001109748",53333,"Mm.61682","NM_016871","ENSMUSG00000002984","Tomm40","AW539759|Mom35|Tom40","translocase of outer mitochondrial membrane 40 homolog (yeast)","protein-coding"]
[6848,"chr6",87888003,87888929,"+",0,"NA","intron (NM_017477, intron 1 of 23)","intron (NM_017477, intron 1 of 23)",494,"NM_201244",54161,"Mm.258785","NM_017477","ENSMUSG00000030058","Copg1","AU019265|BC056168|Copg|D6Ertd71e|D6Wsu16e","coatomer protein complex, subunit gamma 1","protein-coding"]
[2363,"chr14",20707022,20708061,"+",0,"NA","promoter-TSS (NM_001252082)","promoter-TSS (NM_001252082)",-11,"NM_001252081",268721,"Mm.275082","NM_027996","ENSMUSG00000021819","Zswim8","2310021P13Rik|4832404P21Rik|Kiaa0913|mKIAA0913","zinc finger SWIM-type containing 8","protein-coding"]
[1777,"chr12",44268396,44271413,"+",0,"NA","intron (NM_026164, intron 1 of 9)","intron (NM_026164, intron 1 of 9)",750,"NM_026164",67452,"Mm.54126","NM_026164",null,"Pnpla8","1200006O19Rik|AI467579|Ipla2(gamma)","patatin-like phospholipase domain containing 8","protein-coding"]
[4225,"chr19",42169743,42171273,"+",0,"NA","promoter-TSS (NM_001164531)","promoter-TSS (NM_001164531)",-59,"NM_177319",319740,"Mm.287359","NM_177319","ENSMUSG00000018820","Zfyve27","2210011N02Rik|9530077C24Rik|AI426636|AI593546|AI835681","zinc finger, FYVE domain containing 27","protein-coding"]
[1217,"chr11",69654733,69657317,"+",0,"NA","TTS (NM_011900)","TTS (NM_011900)",988,"NM_009235",20670,"Mm.347499","NM_009235",null,"Sox15","-","SRY (sex determining region Y)-box 15","protein-coding"]
[4165,"chr19",29066657,29067670,"+",0,"NA","promoter-TSS (NR_045687)","promoter-TSS (NR_045687)",-138,"NR_045687",100503337,"Mm.103412","NR_045687",null,"Gm9895","ENSMUSG00000052976","predicted gene 9895","ncRNA"]
[3396,"chr17",26137702,26139797,"+",0,"NA","promoter-TSS (NM_001159598)","promoter-TSS (NM_001159598)",63,"NM_001159598",12005,"Mm.23684","NM_009733","ENSMUSG00000024182","Axin1","AI316800|Axin|Fu|Kb|Ki|fused|kinky|knobbly","axin 1","protein-coding"]
[8898,"chrX",100774443,100775028,"+",0,"NA","5' UTR (NM_001177779, exon 1 of 14)","5' UTR (NM_001177779, exon 1 of 14)",240,"NM_001177779",53310,"Mm.4615","NM_016747","ENSMUSG00000000881","Dlg3","Dlgh3|SAP102|mKIAA1232","discs, large homolog 3 (Drosophila)","protein-coding"]
[6574,"chr5",143525068,143529918,"+",0,"NA","intron (NM_009007, intron 1 of 5)","CpG",500,"NM_009007",19353,"Mm.292510","NM_009007","ENSMUSG00000001847","Rac1","AL023026|D5Ertd559e","RAS-related C3 botulinum substrate 1","protein-coding"]
[1693,"chr11",120950453,120950606,"+",0,"NA","intron (NM_001038654, intron 1 of 4)","intron (NM_001038654, intron 1 of 4)",1462,"NM_001038654",80879,"Mm.28632","NM_030696","ENSMUSG00000025161","Slc16a3","Mct3|Mct4","solute carrier family 16 (monocarboxylic acid transporters), member 3","protein-coding"]
[1806,"chr12",65172226,65173562,"+",0,"NA","promoter-TSS (NM_172578)","promoter-TSS (NM_172578)",-314,"NM_172578",217653,"Mm.21144","NM_172578","ENSMUSG00000047534","Mis18bp1","6720403H11|C79407|Knl2|mKIAA1903","MIS18 binding protein 1","protein-coding"]
[1370,"chr11",86200563,86202224,"+",0,"NA","promoter-TSS (NM_178309)","promoter-TSS (NM_178309)",33,"NR_130958",74038,"Mm.171304","NR_130958",null,"Brip1os","4632419I22Rik","BRCA1 interacting protein C-terminal helicase 1, opposite strand","ncRNA"]
[4809,"chr2",145785503,145786356,"+",0,"NA","promoter-TSS (NM_028724)","promoter-TSS (NM_028724)",-187,"NM_028724",74030,"Mm.228799","NM_028724","ENSMUSG00000001768","Rin2","2010003K16Rik|4632403N06Rik|AW821980|RASSF4","Ras and Rab interactor 2","protein-coding"]
[5483,"chr4",34613930,34615726,"+",0,"NA","promoter-TSS (NM_181406)","promoter-TSS (NM_181406)",114,"NM_001159563",50793,"Mm.399624","NM_015824",null,"Orc3","Orc3l","origin recognition complex, subunit 3","protein-coding"]
[3573,"chr17",44776721,44777927,"+",0,"NA","5' UTR (NM_178652, exon 1 of 12)","5' UTR (NM_178652, exon 1 of 12)",153,"NM_178652",109115,"Mm.431327","NM_178652","ENSMUSG00000038954","Supt3","2310066G22Rik|AI315192|SPT3|SPT3L|Supt3h","suppressor of Ty 3","protein-coding"]
[6263,"chr5",92136863,92138639,"+",0,"NA","promoter-TSS (NM_019490)","promoter-TSS (NM_019490)",-187,"NM_019490",56041,"Mm.15868","NM_019490","ENSMUSG00000029407","Uso1","115kDa|TAP|Vdp","USO1 vesicle docking factor","protein-coding"]
[4254,"chr19",46056270,46058537,"+",0,"NA","intron (NM_001081214, intron 1 of 13)","intron (NM_001081214, intron 1 of 13)",864,"NM_001081214",226169,"Mm.2415","NM_145504","ENSMUSG00000055491","Pprc1","A930018M19|BC013720|PRC|mKIAA0595","peroxisome proliferative activated receptor, gamma, coactivator-related 1","protein-coding"]
[795,"chr10",82858134,82861285,"+",0,"NA","promoter-TSS (NM_001042514)","promoter-TSS (NM_001042514)",503,"NM_015762",50493,"Mm.210155","NM_015762","ENSMUSG00000020250","Txnrd1","TR|TR1|TrxR1","thioredoxin reductase 1","protein-coding"]
[944,"chr10",128909377,128910702,"+",0,"NA","intron (NM_007653, intron 1 of 7)","CpG",173,"NM_007653",12512,"Mm.371552","NM_007653","ENSMUSG00000025351","Cd63","C75951|ME491|Tspan30","CD63 antigen","protein-coding"]
[3405,"chr17",26938810,26940445,"+",0,"NA","promoter-TSS (NR_104458)","promoter-TSS (NR_104458)",-89,"NM_026307",67675,"Mm.439919","NM_026307","ENSMUSG00000024194","Cuta","0610039D01Rik|1810022E02Rik|1810060C03Rik|2700094G22Rik|AI326454","cutA divalent cation tolerance homolog (E. coli)","protein-coding"]
[957,"chr11",4135199,4135724,"+",0,"NA","exon (NM_027859, exon 1 of 9)","exon (NM_027859, exon 1 of 9)",301,"NM_027859",71673,"Mm.240586","NM_027859","ENSMUSG00000003581","Rnf215","0610009J22Rik|AW557025|C77903","ring finger protein 215","protein-coding"]
[502,"chr1",192770293,192771716,"+",0,"NA","5' UTR (NM_144881, exon 1 of 12)","5' UTR (NM_144881, exon 1 of 12)",215,"NM_144881",226861,"Mm.145857","NM_144881","ENSMUSG00000037375","Hhat","2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will","hedgehog acyltransferase","protein-coding"]
[3385,"chr17",25823452,25824083,"+",0,"NA","5' UTR (NM_173741, exon 1 of 9)","5' UTR (NM_173741, exon 1 of 9)",140,"NM_173741",268933,"Mm.95512","NM_173741","ENSMUSG00000025737","Wdr24","BC037651","WD repeat domain 24","protein-coding"]
[5921,"chr4",138970136,138974095,"+",0,"NA","promoter-TSS (NM_001305423)","promoter-TSS (NM_001305423)",-168,"NM_001305423",77056,"Mm.122336","NM_029857","ENSMUSG00000041143","Tmco4","4632413C14Rik|AI430825","transmembrane and coiled-coil domains 4","protein-coding"]
[2058,"chr13",28952005,28953651,"+",0,"NA","exon (NM_009238, exon 1 of 1)","exon (NM_009238, exon 1 of 1)",854,"NM_009238",20677,"Mm.240627","NM_009238",null,"Sox4","AA682046|Sox-4","SRY (sex determining region Y)-box 4","protein-coding"]
[5317,"chr3",108653539,108655236,"+",0,"NA","intron (NM_001177770, intron 1 of 10)","intron (NM_001177770, intron 1 of 10)",397,"NM_001177770",229725,"Mm.214545","NM_145543","ENSMUSG00000027884","Clcc1","Mclc","chloride channel CLIC-like 1","protein-coding"]
[3328,"chr17",22866638,22867259,"+",0,"NA","intron (NM_001110254, intron 1 of 4)","intron (NM_001110254, intron 1 of 4)",186,"NM_177358",240041,"Mm.328828","NM_177358","ENSMUSG00000059142","Zfp945","A630033E08Rik|C730040L01Rik","zinc finger protein 945","protein-coding"]
[831,"chr10",94035334,94036596,"+",0,"NA","promoter-TSS (NM_001304720)","promoter-TSS (NM_001304720)",-36,"NM_053072",13998,"Mm.269596","NM_053072","ENSMUSG00000020021","Fgd6","AA123052|Etohd4|ZFYVE24","FYVE, RhoGEF and PH domain containing 6","protein-coding"]
[5013,"chr3",10349840,10351699,"+",0,"NA","intron (NM_025512, intron 1 of 7)","intron (NM_025512, intron 1 of 7)",532,"NM_025512",66361,"Mm.371617","NM_025512","ENSMUSG00000039795","Zfand1","2310008M20Rik|AW048890","zinc finger, AN1-type domain 1","protein-coding"]
[1206,"chr11",68901597,68902526,"+",0,"NA","intron (NR_003373, intron 1 of 3)","intron (NR_003373, intron 1 of 3)",472,"NR_003373",100034726,"Mm.3229","NR_003373","ENSMUSG00000062353","Gm15772","ENSMUSG00000062353|OTTMUSG00000026108","ribosomal protein L26 pseudogene","pseudo"]
[1953,"chr12",105683766,105688416,"+",0,"NA","promoter-TSS (NM_029654)","promoter-TSS (NM_029654)",739,"NM_178613",66787,"Mm.248019","NM_178613","ENSMUSG00000044715","Gskip","4933433P14Rik","GSK3B interacting protein","protein-coding"]
[4823,"chr2",150608077,150608481,"+",0,"NA","intron (NM_027977, intron 1 of 8)","intron (NM_027977, intron 1 of 8)",244,"NM_027977",71881,"Mm.26599","NM_027977","ENSMUSG00000033096","Apmap","2310001A20Rik|AI314817","adipocyte plasma membrane associated protein","protein-coding"]
[1222,"chr11",69685253,69686394,"+",0,"NA","promoter-TSS (NM_001159505)","promoter-TSS (NM_001159505)",-269,"NM_023517",69583,"Mm.8983","NM_023517","ENSMUSG00000089669","Tnfsf13","2310026N09Rik|April|Tall2|Trdl1","tumor necrosis factor (ligand) superfamily, member 13","protein-coding"]
[3308,"chr17",15497657,15498709,"+",0,"NA","promoter-TSS (NM_011185)","promoter-TSS (NM_011185)",93,"NM_011185",19170,"Mm.32912","NM_011185","ENSMUSG00000014769","Psmb1","AA409053|C81484|Lmpc5","proteasome (prosome, macropain) subunit, beta type 1","protein-coding"]
[1451,"chr11",97765475,97767160,"+",0,"NA","intron (NM_026186, intron 1 of 9)","intron (NM_026186, intron 1 of 9)",296,"NM_026186",67480,"Mm.33206","NM_026186","ENSMUSG00000018541","Cwc25","1300013D05Rik|AA473636|Ccdc49|R75228","CWC25 spliceosome-associated protein homolog (S. cerevisiae)","protein-coding"]
[5400,"chr3",145922230,145926435,"+",0,"NA","promoter-TSS (NM_009740)","promoter-TSS (NM_009740)",70,"NM_009740",12042,"Mm.239141","NM_009740","ENSMUSG00000028191","Bcl10","AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10","B cell leukemia/lymphoma 10","protein-coding"]
[8438,"chr9",57520793,57521939,"+",0,"NA","exon (NM_007747, exon 1 of 5)","exon (NM_007747, exon 1 of 5)",134,"NM_007747",12858,"Mm.273403","NM_007747","ENSMUSG00000000088","Cox5a","AA959768|CcOX","cytochrome c oxidase subunit Va","protein-coding"]
[1468,"chr11",98681989,98683144,"+",0,"NA","promoter-TSS (NM_009439)","promoter-TSS (NM_009439)",12,"NM_009439",22123,"Mm.12194","NM_009439","ENSMUSG00000017221","Psmd3","AI255837|AntP91a|D11Bwg1349e|Psd3|Tstap91a","proteasome (prosome, macropain) 26S subunit, non-ATPase, 3","protein-coding"]
[7061,"chr7",6155157,6156253,"+",0,"NA","intron (NM_001013012, intron 1 of 2)","CpG",266,"NM_001013012",67109,"Mm.3254","NM_001013012","ENSMUSG00000046792","Zfp787","2210018M03Rik|Znf787","zinc finger protein 787","protein-coding"]
[7008,"chr6",137753692,137754783,"+",0,"NA","promoter-TSS (NM_172733)","promoter-TSS (NM_172733)",-340,"NM_172733",232449,"Mm.29181","NM_172733","ENSMUSG00000030225","Dera","2010002D22Rik|2500002K03Rik|DEOC","2-deoxyribose-5-phosphate aldolase homolog (C. elegans)","protein-coding"]
[6132,"chr5",33017962,33020047,"+",0,"NA","5' UTR (NM_011738, exon 1 of 2)","5' UTR (NM_011738, exon 1 of 2)",188,"NM_011738",22629,"Mm.332314","NM_011738","ENSMUSG00000018965","Ywhah","-","tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide","protein-coding"]
[5430,"chr4",6452257,6454642,"+",0,"NA","intron (NM_010945, intron 1 of 30)","intron (NM_010945, intron 1 of 30)",822,"NM_010945",18201,"Mm.3059","NM_010945","ENSMUSG00000028245","Nsmaf","AA959567|C630007J05|Fan","neutral sphingomyelinase (N-SMase) activation associated factor","protein-coding"]
[2327,"chr13",119408724,119409763,"+",0,"NA","promoter-TSS (NM_008710)","promoter-TSS (NM_008710)",14,"NM_001308506",18115,"Mm.132584","NM_008710","ENSMUSG00000025453","Nnt","4930423F13Rik|AI323702|BB168308","nicotinamide nucleotide transhydrogenase","protein-coding"]
[3189,"chr16",55972545,55975631,"+",0,"NA","non-coding (NR_027965, exon 1 of 1)","non-coding (NR_027965, exon 1 of 1)",284,"NM_173026",271377,"Mm.282814","NM_173026","ENSMUSG00000022601","Zbtb11","9230110G02Rik|ZNF-U69274","zinc finger and BTB domain containing 11","protein-coding"]
[7286,"chr7",44468121,44468448,"+",0,"NA","TTS (NM_026690)","TTS (NM_026690)",304,"NM_001205070",66124,"Mm.358691","NM_025368","ENSMUSG00000038695","Josd2","1110007C05Rik","Josephin domain containing 2","protein-coding"]
[4763,"chr2",129800170,129802252,"+",0,"NA","non-coding (NR_029452, exon 1 of 1)","non-coding (NR_029452, exon 1 of 1)",248,"NR_029452",654409,"Mm.305555","NR_029452",null,"4932416H05Rik","-","RIKEN cDNA 4932416H05 gene","ncRNA"]
[4471,"chr2",32775112,32776362,"+",0,"NA","promoter-TSS (NM_177384)","promoter-TSS (NM_177384)",-84,"NM_178595",329384,"Mm.268037","NM_178595","ENSMUSG00000053746","Ptrh1","2210013M04Rik|AW046744","peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)","protein-coding"]
[1432,"chr11",96822193,96833123,"+",0,"NA","exon (NM_008686, exon 2 of 5)","exon (NM_008686, exon 2 of 5)",1844,"NM_001130450",18023,"Mm.6743","NM_008686","ENSMUSG00000038615","Nfe2l1","AA408798|AW212678|LCR-F1|Lcrf1|NRF1|TCF-11|TCF11","nuclear factor, erythroid derived 2,-like 1","protein-coding"]
[1930,"chr12",100185670,100188567,"+",0,"NA","promoter-TSS (NR_045282)","promoter-TSS (NR_045282)",-850,"NR_045282",100038378,"Mm.387075","NR_045282","ENSMUSG00000072884","Gm10433","ENSMUSG00000072884","predicted gene 10433","ncRNA"]
[8739,"chr9",122805032,122806864,"+",0,"NA","intron (NM_001013405, intron 1 of 10)","intron (NM_001013405, intron 1 of 10)",401,"NM_001013405",382117,"Mm.215892","NM_001013405","ENSMUSG00000046603","Tcaim","D9Ertd402e|Gm1129|TOAG-1","T cell activation inhibitor, mitochondrial","protein-coding"]
[8034,"chr8",88636793,88638915,"+",0,"NA","Intergenic","Intergenic",-1726,"NM_027840",71607,"Mm.270607","NM_027840","ENSMUSG00000031662","Snx20","9130017C17Rik","sorting nexin 20","protein-coding"]
[2611,"chr14",104522054,104522986,"+",0,"NA","intron (NM_026047, intron 1 of 5)","CpG",146,"NM_026047",72486,"Mm.291811","NM_026047","ENSMUSG00000022120","Rnf219","2610206B13Rik|2810449K13Rik|AI451544","ring finger protein 219","protein-coding"]
[65,"chr1",39192560,39194559,"+",0,"NA","promoter-TSS (NM_008719)","promoter-TSS (NM_008719)",-713,"NM_008719",18143,"Mm.2380","NM_008719","ENSMUSG00000026077","Npas2","MOP4|bHLHe9","neuronal PAS domain protein 2","protein-coding"]
[5909,"chr4",137048416,137048741,"+",0,"NA","intron (NM_198248, intron 1 of 18)","CpG",117,"NM_198248",230848,"Mm.31068","NM_198248","ENSMUSG00000060862","Zbtb40","BC059177|C230087D24|Gm571|mKIAA0478","zinc finger and BTB domain containing 40","protein-coding"]
[2084,"chr13",37993591,37994187,"+",0,"NA","intron (NM_025965, intron 1 of 7)","CpG",301,"NM_025965",107513,"Mm.426670","NM_025965","ENSMUSG00000021427","Ssr1","2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA","signal sequence receptor, alpha","protein-coding"]
[2473,"chr14",54685822,54688299,"+",0,"NA","promoter-TSS (NM_001085473)","promoter-TSS (NM_001085473)",-129,"NM_023190",56215,"Mm.297078","NM_019567","ENSMUSG00000022185","Acin1","2610036I19Rik|2610510L13Rik|Acinus|Acn|C79325|acinusL|acinusS|mKIAA0670","apoptotic chromatin condensation inducer 1","protein-coding"]
[4726,"chr2",122146696,122150588,"+",0,"NA","intron (NM_009735, intron 1 of 3)","intron (NM_009735, intron 1 of 3)",955,"NM_009735",12010,"Mm.163","NM_009735","ENSMUSG00000060802","B2m","Ly-m11|beta2-m|beta2m","beta-2 microglobulin","protein-coding"]
[8903,"chrX",101532822,101533361,"+",0,"NA","intron (NM_001290729, intron 1 of 37)","intron (NM_001290729, intron 1 of 37)",356,"NM_001290729",270627,"Mm.261750","NM_001081008","ENSMUSG00000031314","Taf1","AU015687|B430306D02Rik|Ccg-1|Ccg1|KAT4|N-TAF1|TAFII250|Taf2a|p250","TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor","protein-coding"]
[5075,"chr3",53016775,53017105,"+",0,"NA","intron (NM_026225, intron 1 of 18)","CpG",283,"NM_026225",67542,"Mm.249548","NM_026225","ENSMUSG00000027742","Cog6","4933405E16Rik|AU018618|mKIAA1134","component of oligomeric golgi complex 6","protein-coding"]
[7772,"chr8",14887867,14890796,"+",0,"NA","intron (NM_012000, intron 1 of 2)","intron (NM_012000, intron 1 of 2)",795,"NM_012000",26889,"Mm.254027","NM_012000","ENSMUSG00000026317","Cln8","mnd","ceroid-lipofuscinosis, neuronal 8","protein-coding"]
[5029,"chr3",27710026,27711298,"+",0,"NA","promoter-TSS (NM_173182)","promoter-TSS (NM_173182)",-223,"NM_173182",72007,"Mm.38832","NM_173182","ENSMUSG00000039286","Fndc3b","1600019O04Rik|AW550168|Fad104|mKIAA4164","fibronectin type III domain containing 3B","protein-coding"]
[5420,"chr3",158035838,158037143,"+",0,"NA","promoter-TSS (NM_024194)","promoter-TSS (NM_024194)",149,"NM_001093752",69207,"Mm.223946","NM_026989","ENSMUSG00000055436","Srsf11","0610009J05Rik|2610019N13Rik|BF642805|Sfrs11","serine/arginine-rich splicing factor 11","protein-coding"]
[3175,"chr16",45158180,45160094,"+",0,"NA","promoter-TSS (NM_028756)","promoter-TSS (NM_028756)",308,"NM_026402",67841,"Mm.41775","NM_026402","ENSMUSG00000022663","Atg3","2610016C12Rik|APG3|Apg3l|Atg3l|PC3-96","autophagy related 3","protein-coding"]
[4819,"chr2",148732125,148732332,"+",0,"NA","intron (NM_019632, intron 1 of 10)","CpG",192,"NM_019632",17957,"Mm.274308","NM_019632","ENSMUSG00000027438","Napb","Brp14|E161|I47|SNARE|b-SNAP","N-ethylmaleimide sensitive fusion protein attachment protein beta","protein-coding"]
[4792,"chr2",138255879,138258041,"+",0,"NA","intron (NM_001025431, intron 1 of 4)","CpG",376,"NM_001025431",228662,"Mm.153405","NM_145534","ENSMUSG00000062098","Btbd3","mKIAA0952","BTB (POZ) domain containing 3","protein-coding"]
[3634,"chr17",56034710,56037243,"+",0,"NA","intron (NM_013664, intron 1 of 9)","intron (NM_013664, intron 1 of 9)",661,"NM_013664",20405,"Mm.1773","NM_013664","ENSMUSG00000003200","Sh3gl1","C77078|EEN|SH3P8|Sh3d2b","SH3-domain GRB2-like 1","protein-coding"]
[4639,"chr2",104095970,104096387,"+",0,"NA","intron (NM_007652, intron 1 of 3)","intron (NM_007652, intron 1 of 3)",377,"NM_001111060",12509,"Mm.247265","NM_007652","ENSMUSG00000032679","Cd59a","AA987121|Cd59|protectin","CD59a antigen","protein-coding"]
[5407,"chr3",146813078,146813300,"+",0,"NA","promoter-TSS (NM_011100)","promoter-TSS (NM_011100)",-243,"NM_011100",18749,"Mm.16766","NM_011100","ENSMUSG00000005034","Prkacb","CbPKA|Pkacb","protein kinase, cAMP dependent, catalytic, beta","protein-coding"]
[4246,"chr19",45560021,45560862,"+",0,"NA","promoter-TSS (NM_172639)","promoter-TSS (NM_172639)",102,"NM_020032",56626,"Mm.46509","NM_020032","ENSMUSG00000025218","Poll","1110003P06Rik|AV007317","polymerase (DNA directed), lambda","protein-coding"]
[5518,"chr4",43561788,43563534,"+",0,"NA","promoter-TSS (NM_013497)","promoter-TSS (NM_013497)",27,"NM_013497",12913,"Mm.12407","NM_013497","ENSMUSG00000028466","Creb3","AU044960|AW538053|C80076|LZIP|LZIP-1|LZIP-2|Luman","cAMP responsive element binding protein 3","protein-coding"]
[4233,"chr19",44105902,44108043,"+",0,"NA","intron (NM_007700, intron 1 of 20)","intron (NM_007700, intron 1 of 20)",505,"NM_007700",12675,"Mm.3996","NM_007700","ENSMUSG00000025199","Chuk","AI256658|Chuk1|Fbx24|Fbxo24|IKBKA|IKK1|Ikka|NFKBIKA","conserved helix-loop-helix ubiquitous kinase","protein-coding"]
[4532,"chr2",60962514,60962948,"+",0,"NA","exon (NM_020296, exon 1 of 14)","exon (NM_020296, exon 1 of 14)",473,"NM_020296",56878,"Mm.259667","NM_020296","ENSMUSG00000026970","Rbms1","2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1","RNA binding motif, single stranded interacting protein 1","protein-coding"]
[7170,"chr7",27258360,27259607,"+",0,"NA","intron (NM_010950, intron 1 of 9)","GC_rich|Low_complexity|Low_complexity",222,"NM_010950",18223,"Mm.458153","NM_010950","ENSMUSG00000063160","Numbl","nbl","numb-like","protein-coding"]
[5398,"chr3",145575866,145576957,"+",0,"NA","exon (NM_001081094, exon 1 of 10)","exon (NM_001081094, exon 1 of 10)",203,"NM_001081094",229937,"Mm.24586","NM_001081094","ENSMUSG00000074182","Znhit6","2410019A14Rik","zinc finger, HIT type 6","protein-coding"]
[3126,"chr16",32245538,32247732,"+",0,"NA","promoter-TSS (NM_026898)","promoter-TSS (NM_026898)",390,"NM_173439",268882,"Mm.256137","NM_173439","ENSMUSG00000035764","Fbxo45","2610017J04Rik|AI463119|BC026799","F-box protein 45","protein-coding"]
[8962,"chrX",159254145,159257171,"+",0,"NA","promoter-TSS (NM_148945)","promoter-TSS (NM_148945)",-124,"NM_148945",110651,"Mm.328476","NM_148945","ENSMUSG00000031309","Rps6ka3","MAPKAPK-1b|MPK-9|Rsk2|S6K-alpha3|p90RSK3|pp90RSK2","ribosomal protein S6 kinase polypeptide 3","protein-coding"]
[482,"chr1",185328695,185329892,"+",0,"NA","5' UTR (NM_198653, exon 1 of 23)","5' UTR (NM_198653, exon 1 of 23)",108,"NM_198653",381314,"Mm.275841","NM_198653","ENSMUSG00000026618","Iars2","2010002H18Rik|C79125","isoleucine-tRNA synthetase 2, mitochondrial","protein-coding"]
[8237,"chr9",4308680,4310890,"+",0,"NA","promoter-TSS (NM_026276)","promoter-TSS (NM_026276)",-31,"NM_026962",69149,"Mm.25946","NM_026962","ENSMUSG00000025893","Kbtbd3","2200003A07Rik|Bklhd3","kelch repeat and BTB (POZ) domain containing 3","protein-coding"]
[6783,"chr6",71543295,71544699,"+",0,"NA","exon (NM_025783, exon 1 of 6)","exon (NM_025783, exon 1 of 6)",143,"NM_025783",66700,"Mm.181278","NM_025783","ENSMUSG00000053119","Chmp3","25.1|4921505F14Rik|9130011K15Rik|CGI-49|D6Ertd286e|NEDF|Vps24","charged multivesicular body protein 3","protein-coding"]
[1047,"chr11",31669778,31673003,"+",0,"NA","intron (NM_001024919, intron 1 of 3)","CpG",472,"NM_001024919",69556,"Mm.34183","NM_001024919","ENSMUSG00000044502","Bod1","2310022M17Rik|BOD2.1|Fam44b","biorientation of chromosomes in cell division 1","protein-coding"]
[3228,"chr16",87454591,87456009,"+",0,"NA","intron (NM_024258, intron 1 of 17)","CpG",315,"NM_024258",74112,"Mm.152941","NM_024258","ENSMUSG00000025616","Usp16","1200004E02Rik|2810483I07Rik|6330514E22Rik|UBPM","ubiquitin specific peptidase 16","protein-coding"]
[2618,"chr14",118235658,118237576,"+",0,"NA","non-coding (NR_131969, exon 1 of 3)","non-coding (NR_131969, exon 1 of 3)",385,"NR_131970",105245869,"Mm.460408","NR_131969",null,"LOC105245869","-","uncharacterized LOC105245869","ncRNA"]
[5618,"chr4",95966841,95968517,"+",0,"NA","promoter-TSS (NR_045777)","promoter-TSS (NR_045777)",-24,"NR_045776",319247,"Mm.473527","NM_175680","ENSMUSG00000044125","9530080O11Rik","-","RIKEN cDNA 9530080O11 gene","ncRNA"]
[7496,"chr7",105399100,105400902,"+",0,"NA","promoter-TSS (NM_001242365)","promoter-TSS (NM_001242365)",53,"NM_001242364",74349,"Mm.30254","NM_199009","ENSMUSG00000044465","Fam160a2","4632419K20Rik|6530415H11Rik|FHIP","family with sequence similarity 160, member A2","protein-coding"]
[8652,"chr9",108048249,108056110,"+",0,"NA","promoter-TSS (NM_177275)","promoter-TSS (NM_177275)",-980,"NM_177275",320844,"Mm.449806","NM_177275","ENSMUSG00000032593","Amigo3","E430002N15Rik|ali3|mKIAA1851","adhesion molecule with Ig like domain 3","protein-coding"]
[7328,"chr7",46033914,46035002,"+",0,"NA","intron (NM_153057, intron 1 of 30)","intron (NM_153057, intron 1 of 30)",762,"NM_153057",211548,"Mm.274811","NM_153057","ENSMUSG00000030835","Nomo1","D7Ertd156e|Nomo|pM5","nodal modulator 1","protein-coding"]
[8453,"chr9",59484593,59487645,"+",0,"NA","exon (NM_019927, exon 1 of 14)","exon (NM_019927, exon 1 of 14)",255,"NM_019927",23806,"Mm.305925","NM_019927","ENSMUSG00000025234","Arih1","AU021774|Ari|Ari1|Hari|Hhari|Ubch7bp|Uip77","ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)","protein-coding"]
[3202,"chr16",59471859,59473227,"+",0,"NA","intron (NM_025910, intron 1 of 9)","RSINE1|SINE|B4",768,"NM_025910",67014,"Mm.289150","NM_025910","ENSMUSG00000022724","Mina","1810047J07Rik|2410057H13Rik|3830408E23Rik|AI449204","myc induced nuclear antigen","protein-coding"]
[2396,"chr14",31000596,31002256,"+",0,"NA","promoter-TSS (NM_001165930)","promoter-TSS (NM_001165930)",-7,"NM_029626",76485,"Mm.8766","NM_029626","ENSMUSG00000021916","Glt8d1","2410004H05Rik|5430414N14Rik|AI450005","glycosyltransferase 8 domain containing 1","protein-coding"]
[3897,"chr18",60501025,60501576,"+",0,"NA","intron (NM_134133, intron 1 of 1)","intron (NM_134133, intron 1 of 1)",683,"NM_134133",106878,"Mm.273197","NM_134133","ENSMUSG00000038059","Smim3","2010002N04Rik|AI195350|AW561905|Nid67|cI-41","small integral membrane protein 3","protein-coding"]
[5560,"chr4",56801726,56802904,"+",0,"NA","promoter-TSS (NM_026079)","promoter-TSS (NM_026079)",-14,"NM_001081420",230234,"Mm.268148","NM_001081420","ENSMUSG00000038827","Fam206a","simiate","family with sequence similarity 206, member A","protein-coding"]
[1050,"chr11",32221384,32222697,"+",0,"NA","intron (NM_001291818, intron 1 of 17)","CpG",253,"NM_010117",13650,"Mm.11545","NM_010117","ENSMUSG00000020282","Rhbdf1","C16ORF8|Dist|Dist1|Egfr-rs|mKIAA4242","rhomboid family 1 (Drosophila)","protein-coding"]
[6162,"chr5",36695148,36697483,"+",0,"NA","promoter-TSS (NM_001081232)","promoter-TSS (NM_001081232)",-294,"NM_001081232",320661,"Mm.26480","NM_177221","ENSMUSG00000029190","D5Ertd579e","9030221A05Rik|A930018H20Rik|Kiaa0232|mKIAA0232","DNA segment, Chr 5, ERATO Doi 579, expressed","protein-coding"]
[1031,"chr11",23768082,23772762,"+",0,"NA","intron (NM_009044, intron 1 of 9)","intron (NM_009044, intron 1 of 9)",548,"NM_009044",19696,"Mm.4869","NM_009044",null,"Rel","c-Rel","reticuloendotheliosis oncogene","protein-coding"]
[4845,"chr2",153014943,153015255,"+",0,"NA","intron (NM_178939, intron 1 of 4)","intron (NM_178939, intron 1 of 4)",284,"NM_178939",68559,"Mm.12746","NM_178939","ENSMUSG00000027472","Pdrg1","1110004D19Rik|AU020945|AV006589|Pdrg","p53 and DNA damage regulated 1","protein-coding"]
[8242,"chr9",7835839,7838509,"+",0,"NA","promoter-TSS (NM_007465)","promoter-TSS (NM_007465)",-117,"NM_007465",11797,"Mm.335659","NM_007465","ENSMUSG00000057367","Birc2","AW146227|Api1|Api2|Birc3|C330006D17Rik|HIAP1|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF48|cIAP1|cIAP2|mcIAP1","baculoviral IAP repeat-containing 2","protein-coding"]
[6700,"chr6",39419517,39420455,"+",0,"NA","promoter-TSS (NM_001311109)","promoter-TSS (NM_001311109)",-210,"NM_001311109",54484,"Mm.270484","NM_018810","ENSMUSG00000029922","Mkrn1","RFP","makorin, ring finger protein, 1","protein-coding"]
[5577,"chr4",62359624,62361190,"+",0,"NA","promoter-TSS (NM_175090)","promoter-TSS (NM_175090)",141,"NM_001045528",338355,"Mm.357792","NM_001045528","ENSMUSG00000066151","Fkbp15","BB131447|C430014M02Rik|FKBO133|FKBP-133|FKBP-15|FKBP133|mKIAA0674","FK506 binding protein 15","protein-coding"]
[325,"chr1",136414701,136416543,"+",0,"NA","promoter-TSS (NR_024328)","promoter-TSS (NR_024328)",-103,"NR_024328",320054,"Mm.208000","NR_024328","ENSMUSG00000097403","9230116N13Rik","-","RIKEN cDNA 9230116N13 gene","ncRNA"]
[1233,"chr11",69919348,69923360,"+",0,"NA","promoter-TSS (NM_001166592)","promoter-TSS (NM_001166592)",32,"NM_001166591",276770,"Mm.18026","NM_181582","ENSMUSG00000078812","Eif5a","AA410058|D19Wsu54e|Eif4d|Eif5a1|eIF-4D|eIF-5A|eIF-5A-1|eIF-5A1","eukaryotic translation initiation factor 5A","protein-coding"]
[2831,"chr15",80090997,80092067,"+",0,"NA","intron (NM_009303, intron 1 of 3)","CpG",198,"NM_207708",20972,"Mm.230301","NM_009303","ENSMUSG00000022415","Syngr1","R75468|Syngr1b|p29","synaptogyrin 1","protein-coding"]
[7192,"chr7",28350068,28351409,"+",0,"NA","promoter-TSS (NM_013647)","promoter-TSS (NM_013647)",49,"NM_013647",20055,"Mm.702","NM_013647","ENSMUSG00000037563","Rps16","AA420385|AI317031","ribosomal protein S16","protein-coding"]
[3525,"chr17",35163592,35166113,"+",0,"NA","promoter-TSS (NM_001199044)","promoter-TSS (NM_001199044)",25,"NM_001199044",53761,"Mm.272462","NM_020027","ENSMUSG00000024393","Prrc2a","3110039B05Rik|Bat-2|Bat2|D17H6S51E|G2|Wbp12|mKIAA4178","proline-rich coiled-coil 2A","protein-coding"]
[3207,"chr16",62853460,62855051,"+",0,"NA","promoter-TSS (NM_011173)","promoter-TSS (NM_011173)",-52,"NM_011173",19128,"Mm.127156","NM_011173","ENSMUSG00000022912","Pros1","AW214361","protein S (alpha)","protein-coding"]
[966,"chr11",4987031,4988206,"+",0,"NA","intron (NM_001243044, intron 1 of 21)","MIRb|SINE|MIR",794,"NM_007454",11764,"Mm.274816","NM_007454","ENSMUSG00000009090","Ap1b1","Adtb1|b2b1660Clo","adaptor protein complex AP-1, beta 1 subunit","protein-coding"]
[5918,"chr4",138434244,138435868,"+",0,"NA","intron (NM_026689, intron 1 of 3)","intron (NM_026689, intron 1 of 3)",384,"NM_026689",68350,"Mm.103413","NM_026689","ENSMUSG00000041241","Mul1","0610009K11Rik|AV000801|Gide","mitochondrial ubiquitin ligase activator of NFKB 1","protein-coding"]
[5261,"chr3",97609491,97610487,"+",0,"NA","intron (NM_026539, intron 1 of 22)","CpG",201,"NM_026539",68058,"Mm.31761","NM_026539","ENSMUSG00000028089","Chd1l","4432404A22Rik|Alc1|Snf2p","chromodomain helicase DNA binding protein 1-like","protein-coding"]
[4321,"chr2",5894689,5895336,"+",0,"NA","intron (NM_021305, intron 1 of 11)","CpG",341,"NM_021305",57743,"Mm.21435","NM_021305","ENSMUSG00000025816","Sec61a2","-","Sec61, alpha subunit 2 (S. cerevisiae)","protein-coding"]
[2188,"chr13",64248304,64249384,"+",0,"NA","promoter-TSS (NM_001122989)","promoter-TSS (NM_001122989)",144,"NR_045798",66503,"Mm.443331","NR_045798","ENSMUSG00000097101","1810034E14Rik","-","RIKEN cDNA 1810034E14 gene","ncRNA"]
[2339,"chr14",11553082,11554201,"+",0,"NA","promoter-TSS (NM_008981)","promoter-TSS (NM_008981)",88,"NM_008981",19270,"Mm.431266","NM_008981","ENSMUSG00000021745","Ptprg","5430405N12Rik|AW046354|AW549872|RPTPgamma","protein tyrosine phosphatase, receptor type, G","protein-coding"]
[8385,"chr9",48834932,48836790,"+",0,"NA","promoter-TSS (NM_001033324)","promoter-TSS (NM_001033324)",84,"NM_001033324",235320,"Mm.457803","NM_001033324","ENSMUSG00000066687","Zbtb16","AI467657|PLZF|Zfp145|lu","zinc finger and BTB domain containing 16","protein-coding"]
[160,"chr1",72583321,72584398,"+",0,"NA","intron (NM_018817, intron 1 of 16)","intron (NM_018817, intron 1 of 16)",608,"NM_018817",54380,"Mm.274232","NM_018817","ENSMUSG00000039354","Smarcal1","6030401P21Rik|AI851716|Mharp","SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1","protein-coding"]
[7459,"chr7",99380649,99382223,"+",0,"NA","promoter-TSS (NM_201352)","promoter-TSS (NM_201352)",-113,"NM_201352",233552,"Mm.286317","NM_201352","ENSMUSG00000035314","Gdpd5","BC024955|Gde2","glycerophosphodiester phosphodiesterase domain containing 5","protein-coding"]
[1381,"chr11",87109306,87109949,"+",0,"NA","promoter-TSS (NM_175563)","promoter-TSS (NM_175563)",366,"NM_025377",66140,"Mm.45008","NM_025377",null,"Ska2","1110001A07Rik|C78640|Fam33a","spindle and kinetochore associated complex subunit 2","protein-coding"]
[8063,"chr8",95142246,95143137,"+",0,"NA","promoter-TSS (NM_001145831)","promoter-TSS (NM_001145831)",-151,"NM_001145831",16582,"Mm.378951","NM_010631","ENSMUSG00000031788","Kifc3","AI325457|BB123200","kinesin family member C3","protein-coding"]
[7920,"chr8",70760028,70762386,"+",0,"NA","promoter-TSS (NM_183170)","promoter-TSS (NM_183170)",-286,"NM_183170",234384,"Mm.213010","NM_183170","ENSMUSG00000035559","Mpv17l2","Fksg24","MPV17 mitochondrial membrane protein-like 2","protein-coding"]
[3193,"chr16",56716205,56718485,"+",0,"NA","5' UTR (NM_001252443, exon 1 of 7)","5' UTR (NM_001252443, exon 1 of 7)",105,"NM_001252443",21787,"Mm.425970","NM_019678","ENSMUSG00000022757","Tfg","AI173908","Trk-fused gene","protein-coding"]
[1185,"chr11",61929679,61931021,"+",0,"NA","promoter-TSS (NM_019921)","promoter-TSS (NM_019921)",-93,"NM_019921",56697,"Mm.274404","NM_019921","ENSMUSG00000047804","Akap10","1500031L16Rik|B130049N18Rik|D-AKAP-2|D-AKAP2|PRKA10","A kinase (PRKA) anchor protein 10","protein-coding"]
[1741,"chr12",24498158,24498976,"+",0,"NA","promoter-TSS (NR_028341)","promoter-TSS (NR_028341)",-14,"NM_020614",21340,"Mm.39082","NM_020614","ENSMUSG00000059669","Taf1b","4930408G01Rik|A230108M10Rik|TAFI68|Tafi86|p63","TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B","protein-coding"]
[189,"chr1",78655612,78658463,"+",0,"NA","promoter-TSS (NM_001001981)","promoter-TSS (NM_001001981)",-788,"NM_001033606",74205,"Mm.276016","NM_028817","ENSMUSG00000032883","Acsl3","2610510B12Rik|Acs3|C85929|Facl3|Pro2194","acyl-CoA synthetase long-chain family member 3","protein-coding"]
[2330,"chr13",119790044,119791729,"+",0,"NA","promoter-TSS (NM_028245)","promoter-TSS (NM_028245)",-80,"NM_001302549",72465,"Mm.139115","NM_028245","ENSMUSG00000094870","Zfp131","2610109I01Rik|AW558871|Znf131","zinc finger protein 131","protein-coding"]
[6169,"chr5",38219528,38221001,"+",0,"NA","promoter-TSS (NM_025281)","promoter-TSS (NM_025281)",164,"NM_029162",75079,"Mm.258741","NM_029162","ENSMUSG00000029127","Zbtb49","4930518A03Rik|Zfp509|Znf509","zinc finger and BTB domain containing 49","protein-coding"]
[4339,"chr2",15048550,15049770,"+",0,"NA","5' UTR (NM_028950, exon 1 of 11)","5' UTR (NM_028950, exon 1 of 11)",152,"NM_001165942",74455,"Mm.478923","NM_028950","ENSMUSG00000026707","Nsun6","4933403D21Rik|4933414E04Rik|NOPD1","NOL1/NOP2/Sun domain family member 6","protein-coding"]
[3147,"chr16",36040297,36041969,"+",0,"NA","promoter-TSS (NM_027113)","promoter-TSS (NM_027113)",-57,"NM_027113",69544,"Mm.37802","NM_027113","ENSMUSG00000034379","Wdr5b","2310009C03Rik|AI606931","WD repeat domain 5B","protein-coding"]
[5772,"chr4",125084852,125085835,"+",0,"NA","intron (NM_001290701, intron 1 of 6)","CpG",209,"NM_001290701",70088,"Mm.291214","NM_027310","ENSMUSG00000028863","Meaf6","2310005N01Rik|2810036M01Rik","MYST/Esa1-associated factor 6","protein-coding"]
[4547,"chr2",69896807,69898382,"+",0,"NA","exon (NM_177783, exon 1 of 39)","exon (NM_177783, exon 1 of 39)",348,"NM_177783",68795,"Mm.314576","NM_177783","ENSMUSG00000044308","Ubr3","1110059H15Rik|4833421P10Rik|A130030D10Rik|AA409735|AA414972|AA422631|AI646861|AU016126|Zfp650|Znf650","ubiquitin protein ligase E3 component n-recognin 3","protein-coding"]
[2504,"chr14",56777607,56778587,"+",0,"NA","exon (NM_025682, exon 1 of 9)","exon (NM_025682, exon 1 of 9)",219,"NM_025682",66645,"Mm.20129","NM_025682","ENSMUSG00000021938","Pspc1","5730470C09Rik|AI327109|AI449052|PSP1","paraspeckle protein 1","protein-coding"]
[5912,"chr4",137356306,137357670,"+",0,"NA","intron (NM_001243769, intron 1 of 5)","CpG",771,"NM_009861",12540,"Mm.1022","NM_009861","ENSMUSG00000006699","Cdc42","AI747189|AU018915","cell division cycle 42","protein-coding"]
[3724,"chr17",83703749,83707476,"+",0,"NA","promoter-TSS (NM_054082)","promoter-TSS (NM_054082)",-551,"NM_001171054",116871,"Mm.277668","NM_054082","ENSMUSG00000055817","Mta3","1110002J22Rik|mKIAA1266","metastasis associated 3","protein-coding"]
[5020,"chr3",19162661,19163567,"+",0,"NA","promoter-TSS (NM_028840)","promoter-TSS (NM_028840)",-49,"NM_028840",74252,"Mm.200383","NM_028840",null,"Armc1","2310016N05Rik|2900046P06Rik|3110009G21Rik|AA409258|AW048872|Arcp|C330014L16Rik","armadillo repeat containing 1","protein-coding"]
[2966,"chr15",102073101,102074920,"+",0,"NA","intron (NM_145625, intron 1 of 14)","CpG",237,"NM_145625",75705,"Mm.290022","NM_145625","ENSMUSG00000058655","Eif4b","2310046H11Rik|AL024095|C85189|Eif4a2","eukaryotic translation initiation factor 4B","protein-coding"]
[5385,"chr3",139074381,139075854,"+",0,"NA","promoter-TSS (NM_001040690)","promoter-TSS (NM_001040690)",84,"NM_145544",229877,"Mm.28893","NM_145544","ENSMUSG00000028149","Rap1gds1","BC011279|GDS1","RAP1, GTP-GDP dissociation stimulator 1","protein-coding"]
[1576,"chr11",107479461,107480249,"+",0,"NA","intron (NM_025894, intron 1 of 10)","CpG",327,"NM_025894",66997,"Mm.491171","NM_025894","ENSMUSG00000020720","Psmd12","1500002F15Rik|AI480719|P55","proteasome (prosome, macropain) 26S subunit, non-ATPase, 12","protein-coding"]
[8842,"chrX",70385062,70386314,"+",0,"NA","promoter-TSS (NM_026787)","promoter-TSS (NM_026787)",-225,"NM_026787",68618,"Mm.293255","NM_026787","ENSMUSG00000045237","1110012L19Rik","-","RIKEN cDNA 1110012L19 gene","protein-coding"]
[7441,"chr7",96210226,96211199,"+",0,"NA","promoter-TSS (NM_011858)","promoter-TSS (NM_011858)",75,"NM_011858",23966,"Mm.254610","NM_011858","ENSMUSG00000048078","Tenm4","Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302","teneurin transmembrane protein 4","protein-coding"]
[6064,"chr5",20881336,20883177,"+",0,"NA","promoter-TSS (NM_177601)","promoter-TSS (NM_177601)",-132,"NM_172992",68770,"Mm.86410","NM_172992","ENSMUSG00000039987","Phtf2","1110054G21Rik|9530062N20Rik|AI447096|C77923","putative homeodomain transcription factor 2","protein-coding"]
[6250,"chr5",88674986,88676572,"+",0,"NA","promoter-TSS (NM_001098476)","promoter-TSS (NM_001098476)",-199,"NM_001098476",231413,"Mm.332474","NM_178700","ENSMUSG00000044221","Grsf1","BB232551|C80280|D5Wsu31e","G-rich RNA sequence binding factor 1","protein-coding"]
[6021,"chr4",155704202,155706043,"+",0,"NA","5' UTR (NM_026899, exon 1 of 5)","5' UTR (NM_026899, exon 1 of 5)",307,"NM_026899",68991,"Mm.294770","NM_026899","ENSMUSG00000029038","Ssu72","1190002E22Rik|1500011L16Rik|2610101M12Rik","Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)","protein-coding"]
[8358,"chr9",44342496,44344811,"+",0,"NA","intron (NM_013551, intron 1 of 13)","intron (NM_013551, intron 1 of 13)",575,"NM_013551",15288,"Mm.247676","NM_013551","ENSMUSG00000032126","Hmbs","PBGD|T25658|Ups|Uros1","hydroxymethylbilane synthase","protein-coding"]
[3002,"chr16",5254860,5255834,"+",0,"NA","intron (NM_027446, intron 1 of 7)","intron (NM_027446, intron 1 of 7)",609,"NM_027446",70511,"Mm.45780","NM_027446","ENSMUSG00000022544","Eef2kmt","5730409G15Rik|Fam86|Fam86a|eEF2-KMT","eukaryotic elongation factor 2 lysine methyltransferase","protein-coding"]
[8415,"chr9",54863774,54864474,"+",0,"NA","intron (NM_022655, intron 1 of 21)","intron (NM_022655, intron 1 of 21)",369,"NM_022655",64602,"Mm.208991","NM_022655","ENSMUSG00000032293","Ireb2","D9Ertd85e|Irp2","iron responsive element binding protein 2","protein-coding"]
[6084,"chr5",24451451,24452802,"+",0,"NA","promoter-TSS (NM_139153)","promoter-TSS (NM_139153)",-51,"NM_001256431",213990,"Mm.250703","NM_139153","ENSMUSG00000023353","Agap3","AGAP-3|AV028425|Centg3|Crag|Crag.|MRIP-1|cnt-g3","ArfGAP with GTPase domain, ankyrin repeat and PH domain 3","protein-coding"]
[3010,"chr16",10411387,10412174,"+",0,"NA","promoter-TSS (NM_011955)","promoter-TSS (NM_011955)",-158,"NM_011955",26425,"Mm.29037","NM_011955","ENSMUSG00000022503","Nubp1","-","nucleotide binding protein 1","protein-coding"]
[3690,"chr17",71768546,71771371,"+",0,"NA","intron (NR_073185, intron 1 of 16)","intron (NR_073185, intron 1 of 16)",267,"NM_001271484",78785,"Mm.196382","NM_030179","ENSMUSG00000024059","Clip4","1700024K14Rik|1700074B05Rik|4833417L20Rik|5830409B12Rik|Rsnl2","CAP-GLY domain containing linker protein family, member 4","protein-coding"]
[5485,"chr4",34777887,34778275,"+",0,"NA","intron (NM_025471, intron 1 of 3)","intron (NM_025471, intron 1 of 3)",256,"NM_025471",66291,"Mm.28071","NM_025471","ENSMUSG00000028295","Smim8","1810030N24Rik|2810406B13Rik","small integral membrane protein 8","protein-coding"]
[4914,"chr2",163643933,163645576,"+",0,"NA","promoter-TSS (NR_028113)","promoter-TSS (NR_028113)",-96,"NR_028113",68386,"Mm.410649","NR_028113","ENSMUSG00000058812","0610039K10Rik","-","RIKEN cDNA 0610039K10 gene","ncRNA"]
[3858,"chr18",38249776,38250784,"+",0,"NA","promoter-TSS (NR_015475)","promoter-TSS (NR_015475)",31,"NM_024179",66839,"Mm.281086","NM_024179","ENSMUSG00000024442","0610009O20Rik","2700004E22Rik|Dele|Kiaa0141","RIKEN cDNA 0610009O20 gene","protein-coding"]
[4871,"chr2",155728735,155729689,"+",0,"NA","intron (NM_145537, intron 1 of 10)","CpG",263,"NM_145537",108687,"Mm.273706","NM_145537","ENSMUSG00000038312","Edem2","9530090G24Rik|AI327354","ER degradation enhancer, mannosidase alpha-like 2","protein-coding"]
[3499,"chr17",34203774,34206396,"+",0,"NA","intron (NM_011530, intron 1 of 11)","(TG)n|Simple_repeat|Simple_repeat",606,"NM_011530",21355,"Mm.14814","NM_011530",null,"Tap2","ABC18|AI462429|APT2|Abcb3|Ham-2|Ham2|MTP2|PSF2|RING11|Tap-2|Y1|jas","transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)","protein-coding"]
[5370,"chr3",135436879,135441111,"+",0,"NA","promoter-TSS (NR_030689)","promoter-TSS (NR_030689)",236,"NM_025356",66105,"Mm.49884","NM_025356","ENSMUSG00000078578","Ube2d3","1100001F19Rik|9430029A22Rik|AA414951","ubiquitin-conjugating enzyme E2D 3","protein-coding"]
[7301,"chr7",45103283,45104561,"+",0,"NA","promoter-TSS (NM_010189)","promoter-TSS (NM_010189)",-100,"NM_010189",14132,"Mm.3303","NM_010189","ENSMUSG00000003420","Fcgrt","FcRn","Fc receptor, IgG, alpha chain transporter","protein-coding"]
[3958,"chr18",77773377,77775025,"+",0,"NA","intron (NM_007505, intron 1 of 11)","CpG",433,"NM_007505",11946,"Mm.276137","NM_007505","ENSMUSG00000025428","Atp5a1","AI035633|AL022851|AL023067|Atpm|D18Ertd206e|Mom2","ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1","protein-coding"]
[4655,"chr2",112261991,112262802,"+",0,"NA","exon (NM_025403, exon 2 of 2)","exon (NM_025403, exon 2 of 2)",470,"NM_025403",66181,"Mm.272346","NM_025403",null,"Nop10","1110036B12Rik|NOP10P|Nola3","NOP10 ribonucleoprotein","protein-coding"]
[333,"chr1",143776526,143778261,"+",0,"NA","promoter-TSS (NM_013835)","promoter-TSS (NM_013835)",115,"NM_019562",56207,"Mm.261004","NM_019562","ENSMUSG00000018189","Uchl5","5830413B11Rik|Uch37","ubiquitin carboxyl-terminal esterase L5","protein-coding"]
[6525,"chr5",138085070,138085780,"+",0,"NA","intron (NM_029869, intron 1 of 3)","intron (NM_029869, intron 1 of 3)",341,"NM_029869",74570,"Mm.213114","NM_029869","ENSMUSG00000029729","Zkscan1","5930429A01Rik|9130423L19Rik|9230118B16Rik|AI646829|AI788588|C87323|KOX18|PHZ-37|ZNF139","zinc finger with KRAB and SCAN domains 1","protein-coding"]
[7483,"chr7",101895624,101897956,"+",0,"NA","intron (NM_001291349, intron 1 of 4)","intron (NM_001291349, intron 1 of 4)",459,"NM_001291349",75430,"Mm.284491","NM_027532","ENSMUSG00000030649","Anapc15","3200002M19Rik|6330414C15Rik|APC15","anaphase prompoting complex C subunit 15","protein-coding"]
[2842,"chr15",81399133,81400635,"+",0,"NA","promoter-TSS (NM_133726)","promoter-TSS (NM_133726)",-190,"NM_133726",70356,"Mm.180337","NM_133726",null,"St13","1110007I03Rik|3110002K08Rik|AW555194|HIP|HOP|HSPABP|HSPABP1|PRO0786|SNC6|p48","suppression of tumorigenicity 13","protein-coding"]
[2283,"chr13",99344232,99344978,"+",0,"NA","promoter-TSS (NM_026873)","promoter-TSS (NM_026873)",73,"NM_026873",68927,"Mm.276502","NM_026873","ENSMUSG00000021650","Ptcd2","1190005P08Rik","pentatricopeptide repeat domain 2","protein-coding"]
[2603,"chr14",99297381,99301586,"+",0,"NA","intron (NM_009769, intron 1 of 3)","intron (NM_009769, intron 1 of 3)",792,"NM_009769",12224,"Mm.30262","NM_009769","ENSMUSG00000005148","Klf5","4930520J07Rik|Bteb2|CKLF|IKLF","Kruppel-like factor 5","protein-coding"]
[7,"chr1",9545480,9545890,"+",0,"NA","exon (NM_021511, exon 1 of 1)","exon (NM_021511, exon 1 of 1)",277,"NM_021511",59014,"Mm.29061","NM_021511","ENSMUSG00000061024","Rrs1","5730466A07Rik|AA415037|D1Ertd701e|Rrr","RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)","protein-coding"]
[7157,"chr7",25680222,25681434,"+",0,"NA","promoter-TSS (NM_172148)","promoter-TSS (NM_172148)",-330,"NM_172148",232987,"Mm.22849","NM_172148","ENSMUSG00000063439","B9d2","stumpy","B9 protein domain 2","protein-coding"]
[1937,"chr12",101956560,101958729,"+",0,"NA","intron (NM_001167914, intron 1 of 8)","intron (NM_001167914, intron 1 of 8)",599,"NM_029705",110616,"Mm.271914","NM_029705","ENSMUSG00000021189","Atxn3","2210008M02Rik|AI463012|AI647473|ATX3|MJD1|Mjd|Sca3|ataxin-3","ataxin 3","protein-coding"]
[5556,"chr4",53826109,53826402,"+",0,"NA","intron (NM_028053, intron 1 of 5)","CpG",210,"NM_028053",52076,"Mm.27184","NM_028053","ENSMUSG00000028420","Tmem38b","1600017F22Rik|AA437809|AV051057|D4Ertd89e|TRIC-B|mg33b","transmembrane protein 38B","protein-coding"]
[6380,"chr5",117388426,117388911,"+",0,"NA","intron (NM_028128, intron 1 of 10)","CpG",355,"NM_028128",72151,"Mm.27997","NM_028128",null,"Rfc5","2610020K06Rik|2610209F07Rik|36.5kDa|36kDa|Recc5","replication factor C (activator 1) 5","protein-coding"]
[815,"chr10",88200578,88201854,"+",0,"NA","5' UTR (NM_026070, exon 1 of 7)","5' UTR (NM_026070, exon 1 of 7)",119,"NM_027487",67282,"Mm.208465","NM_026070","ENSMUSG00000020056","Ccdc53","2900091E11Rik|5730495F03Rik","coiled-coil domain containing 53","protein-coding"]
[3486,"chr17",33929023,33932079,"+",0,"NA","intron (NM_009059, intron 2 of 17)","CpG",657,"NM_009059",19732,"Mm.43777","NM_009059","ENSMUSG00000041354","Rgl2","KE1.5|Rab2l|Rgt2|Rlf","ral guanine nucleotide dissociation stimulator-like 2","protein-coding"]
[6442,"chr5",124481898,124484327,"+",0,"NA","promoter-TSS (NM_029532)","promoter-TSS (NM_029532)",-43,"NM_029532",76167,"Mm.156035","NM_029532","ENSMUSG00000029402","Snrnp35","6330548G22Rik","small nuclear ribonucleoprotein 35 (U11/U12)","protein-coding"]
[1174,"chr11",60830257,60831286,"+",0,"NA","intron (NM_001172112, intron 1 of 6)","intron (NM_001172112, intron 1 of 6)",140,"NM_145428",216820,"Mm.21475","NM_145428","ENSMUSG00000042569","Dhrs7b","BC003479|C79874|C80074|PexRAP","dehydrogenase/reductase (SDR family) member 7B","protein-coding"]
[8338,"chr9",38717648,38719948,"+",0,"NA","intron (NM_001145957, intron 1 of 18)","intron (NM_001145957, intron 1 of 18)",530,"NM_172767",67776,"Mm.290950","NM_172767","ENSMUSG00000023186","Vwa5a","5830475I06Rik|AW552491|BCSC-1|E130119J22|Loh11cr2a","von Willebrand factor A domain containing 5A","protein-coding"]
[8271,"chr9",20651177,20652748,"+",0,"NA","promoter-TSS (NM_023371)","promoter-TSS (NM_023371)",-168,"NM_023371",23988,"Mm.7906","NM_023371","ENSMUSG00000032171","Pin1","0610025L01Rik|D9Bwg1161e","protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1","protein-coding"]
[658,"chr10",61382977,61383324,"+",0,"NA","intron (NM_013753, intron 1 of 19)","CpG",373,"NM_013753",27355,"Mm.269699","NM_013753","ENSMUSG00000020092","Pald1","MMPAL|Pald|mKIAA1274","phosphatase domain containing, paladin 1","protein-coding"]
[7612,"chr7",127386874,127387053,"+",0,"NA","5' UTR (NM_030226, exon 1 of 3)","5' UTR (NM_030226, exon 1 of 3)",203,"NM_030226",78921,"Mm.200950","NM_030226","ENSMUSG00000030823","9130019O22Rik","-","RIKEN cDNA 9130019O22 gene","protein-coding"]
[1128,"chr11",54866111,54867048,"+",0,"NA","exon (NM_008248, exon 1 of 3)","exon (NM_008248, exon 1 of 3)",141,"NM_008248",15254,"Mm.425","NM_008248","ENSMUSG00000020267","Hint1","AA673479|Hint|Ipk1|PKCI-1|PRKCNH1","histidine triad nucleotide binding protein 1","protein-coding"]
[7407,"chr7",81571328,81572696,"+",0,"NA","intron (NM_001004185, intron 1 of 9)","intron (NM_001004185, intron 1 of 9)",720,"NM_001004185",434204,"Mm.181641","NM_001004185","ENSMUSG00000045795","Whamm","BB081391|Whdc1|mKIAA1971","WAS protein homolog associated with actin, golgi membranes and microtubules","protein-coding"]
[8323,"chr9",32115322,32119209,"+",0,"NA","intron (NM_001195632, intron 1 of 21)","intron (NM_001195632, intron 1 of 21)",1129,"NM_001195632",330914,"Mm.46683","NM_177379","ENSMUSG00000041444","Arhgap32","3426406O18Rik|Gc-gap|Grit|Px-rics|Rics|mKIAA0712|p200Rhogap|p250Gap","Rho GTPase activating protein 32","protein-coding"]
[1724,"chr12",10390783,10391483,"+",0,"NA","TTS (NM_027588)","TTS (NM_027588)",353,"NM_023697",105014,"Mm.119343","NM_023697","ENSMUSG00000020621","Rdh14","3110030G19Rik|AW215439|PAN2","retinol dehydrogenase 14 (all-trans and 9-cis)","protein-coding"]
[7452,"chr7",98176298,98178740,"+",0,"NA","intron (NR_045972, intron 1 of 2)","intron (NR_045972, intron 1 of 2)",325,"NR_045970",330599,"Mm.406608","NR_045969",null,"Gm16938","-","predicted gene, 16938","ncRNA"]
[4056,"chr19",6076658,6077712,"+",0,"NA","promoter-TSS (NM_001081041)","promoter-TSS (NM_001081041)",2,"NM_001081041",68505,"Mm.227361","NM_001081041","ENSMUSG00000024797","Vps51","1110014N23Rik|3110057M17Rik|AI837850|Ffr","vacuolar protein sorting 51 homolog (S. cerevisiae)","protein-coding"]
[8699,"chr9",113930397,113932113,"+",0,"NA","intron (NM_013699, intron 1 of 15)","G-rich|Low_complexity|Low_complexity",321,"NM_013699",22221,"Mm.28052","NM_013699","ENSMUSG00000009741","Ubp1","Cp2b|LBP-1a|LBP-1b|NF2d9","upstream binding protein 1","protein-coding"]
[8893,"chrX",98935976,98938855,"+",0,"NA","promoter-TSS (NM_207633)","promoter-TSS (NM_207633)",-366,"NM_207633",77929,"Mm.212290","NM_207633","ENSMUSG00000047694","Yipf6","A430107J06Rik","Yip1 domain family, member 6","protein-coding"]
[2925,"chr15",98761666,98763404,"+",0,"NA","intron (NM_007478, intron 1 of 4)","CpG",583,"NM_007478",11842,"Mm.221298","NM_007478","ENSMUSG00000051853","Arf3","5430400P17Rik|AI854770","ADP-ribosylation factor 3","protein-coding"]
[5591,"chr4",72198790,72201676,"+",0,"NA","5' UTR (NM_001285532, exon 1 of 7)","5' UTR (NM_001285532, exon 1 of 7)",660,"NM_011599",21885,"Mm.278444","NM_011599","ENSMUSG00000008305","Tle1","C230057C06Rik|Estm14|Grg-1|Grg1|Tle4l","transducin-like enhancer of split 1, homolog of Drosophila E(spl)","protein-coding"]
[7284,"chr7",44305785,44306810,"+",0,"NA","exon (NM_009131, exon 2 of 4)","exon (NM_009131, exon 2 of 4)",662,"NM_009131",20256,"Mm.20428","NM_009131","ENSMUSG00000004473","Clec11a","AW457320|Clecsf3|Scgf","C-type lectin domain family 11, member a","protein-coding"]
[8526,"chr9",73113061,73114053,"+",0,"NA","promoter-TSS (NM_198609)","promoter-TSS (NM_198609)",88,"NM_198609",225215,"Mm.379366","NM_198609","ENSMUSG00000032215","Rsl24d1","2410159K22Rik","ribosomal L24 domain containing 1","protein-coding"]
[1824,"chr12",70150691,70154548,"+",0,"NA","Intergenic","Intergenic",-1552,"NM_001195033",100504285,"Mm.291105","NM_001195033",null,"Abhd12b","Gm804","abhydrolase domain containing 12B","protein-coding"]
[3916,"chr18",64660266,64661729,"+",0,"NA","promoter-TSS (NM_001001488)","promoter-TSS (NM_001001488)",3,"NM_001001488",54670,"Mm.270043","NM_001001488","ENSMUSG00000039529","Atp8b1","AI451886|FIC1|Ic","ATPase, class I, type 8B, member 1","protein-coding"]
[6376,"chr5",117119524,117121039,"+",0,"NA","5' UTR (NM_001199685, exon 1 of 21)","5' UTR (NM_001199685, exon 1 of 21)",152,"NM_001199685",330177,"Mm.24343","NM_183306","ENSMUSG00000061288","Taok3","2900006A08Rik|A130052D22|A430105I05Rik","TAO kinase 3","protein-coding"]
[8686,"chr9",110116790,110118100,"+",0,"NA","5' UTR (NM_001252682, exon 1 of 23)","5' UTR (NM_001252682, exon 1 of 23)",171,"NM_001252682",72831,"Mm.276305","NM_133347","ENSMUSG00000032480","Dhx30","2810477H02Rik|C130058C04Rik|Ddx30|HELG|Ret-CoR","DEAH (Asp-Glu-Ala-His) box polypeptide 30","protein-coding"]
[4985,"chr2",180701219,180702795,"+",0,"NA","promoter-TSS (NM_175551)","promoter-TSS (NM_175551)",95,"NM_011805",23856,"Mm.253836","NM_011805","ENSMUSG00000038914","Dido1","6720461J16Rik|D130048F08Rik|DATF-1|DIO-1|Datf1|dido","death inducer-obliterator 1","protein-coding"]
[2986,"chr16",3908369,3909476,"+",0,"NA","promoter-TSS (NM_029738)","promoter-TSS (NM_029738)",-87,"NM_029738",76779,"Mm.458921","NM_029738","ENSMUSG00000014232","Cluap1","2310030D15Rik|2610111M03Rik","clusterin associated protein 1","protein-coding"]
[3294,"chr17",8282883,8285144,"+",0,"NA","intron (NM_018819, intron 1 of 3)","CpG",200,"NM_018819",55951,"Mm.288510","NM_018819","ENSMUSG00000023861","Mpc1","0610006G08Rik|3830411I18Rik|Brp44l","mitochondrial pyruvate carrier 1","protein-coding"]
[7796,"chr8",25596510,25598729,"+",0,"NA","promoter-TSS (NM_173012)","promoter-TSS (NM_173012)",-132,"NM_173012",270035,"Mm.268349","NM_173012","ENSMUSG00000037363","Letm2","6030453H13|D030041N04Rik","leucine zipper-EF-hand containing transmembrane protein 2","protein-coding"]
[7944,"chr8",72133794,72138528,"+",0,"NA","intron (NM_001001491, intron 1 of 7)","intron (NM_001001491, intron 1 of 7)",869,"NM_001001491",326618,"Mm.295124","NM_001001491","ENSMUSG00000031799","Tpm4","2610528G24Rik|Tpm4.2|Tpm4.2cy","tropomyosin 4","protein-coding"]
[5603,"chr4",86611632,86612542,"+",0,"NA","promoter-TSS (NM_173400)","promoter-TSS (NM_173400)",-65,"NM_173400",230376,"Mm.74730","NM_173400","ENSMUSG00000038047","Haus6","6230416J20Rik|9830144E06|D4Ertd27e|mKIAA1574","HAUS augmin-like complex, subunit 6","protein-coding"]
[7977,"chr8",83331638,83333252,"+",0,"NA","promoter-TSS (NM_001170691)","promoter-TSS (NM_001170691)",41,"NM_001170691",244548,"Mm.38762","NM_178736","ENSMUSG00000035151","Elmod2","9830169G11Rik","ELMO/CED-12 domain containing 2","protein-coding"]
[4220,"chr19",41980592,41982872,"+",0,"NA","promoter-TSS (NM_145500)","promoter-TSS (NM_145500)",-31,"NM_145500",226122,"Mm.22948","NM_145500","ENSMUSG00000025171","Ubtd1","BC016129","ubiquitin domain containing 1","protein-coding"]
[5222,"chr3",94886337,94887318,"+",0,"NA","exon (NM_008945, exon 1 of 7)","exon (NM_008945, exon 1 of 7)",131,"NM_008945",19172,"Mm.368","NM_008945","ENSMUSG00000005779","Psmb4","Pros-27","proteasome (prosome, macropain) subunit, beta type 4","protein-coding"]
[4095,"chr19",8740603,8742554,"+",0,"NA","promoter-TSS (NM_019829)","promoter-TSS (NM_019829)",154,"NM_001167799",56389,"Mm.153061","NM_019829","ENSMUSG00000010110","Stx5a","0610031F24Rik|D19Ertd627e|Stx5","syntaxin 5A","protein-coding"]
[6170,"chr5",38260017,38260846,"+",0,"NA","promoter-TSS (NM_025480)","promoter-TSS (NM_025480)",56,"NM_025480",66309,"Mm.256185","NM_025480","ENSMUSG00000067365","Tmem128","2810021O14Rik","transmembrane protein 128","protein-coding"]
[140,"chr1",63730673,63731209,"+",0,"NA","promoter-TSS (NM_029696)","promoter-TSS (NM_029696)",316,"NM_172422",75619,"Mm.30965","NM_172422",null,"Fastkd2","2810421I24Rik","FAST kinase domains 2","protein-coding"]
[7468,"chr7",100178326,100179017,"+",0,"NA","promoter-TSS (NM_001190950)","promoter-TSS (NM_001190950)",-12,"NM_001190870",57442,"Mm.282386","NM_020574","ENSMUSG00000035165","Kcne3","2210017H05Rik|MiRP2","potassium voltage-gated channel, Isk-related subfamily, gene 3","protein-coding"]
[754,"chr10",80292094,80293514,"+",0,"NA","exon (NM_009091, exon 2 of 4)","exon (NM_009091, exon 2 of 4)",295,"NM_001310726",20054,"Mm.643","NM_009091","ENSMUSG00000063457","Rps15","rig","ribosomal protein S15","protein-coding"]
[4355,"chr2",21204980,21206248,"+",0,"NA","promoter-TSS (NM_001001297)","promoter-TSS (NM_001001297)",-110,"NM_001001297",208967,"Mm.268841","NM_177588","ENSMUSG00000048550","Thnsl1","AW413632","threonine synthase-like 1 (bacterial)","protein-coding"]
[6365,"chr5",115483889,115484917,"+",0,"NA","promoter-TSS (NM_001167691)","promoter-TSS (NM_001167691)",81,"NM_133760",75387,"Mm.332616","NM_133760","ENSMUSG00000029524","Sirt4","4930596O17Rik","sirtuin 4","protein-coding"]
[7122,"chr7",19627683,19630694,"+",0,"NA","intron (NM_009046, intron 1 of 10)","CpG",250,"NM_001290457",19698,"Mm.1741","NM_009046","ENSMUSG00000002983","Relb","shep","avian reticuloendotheliosis viral (v-rel) oncogene related B","protein-coding"]
[6226,"chr5",73406201,73407828,"+",0,"NA","intron (NM_181323, intron 1 of 15)","intron (NM_181323, intron 1 of 15)",936,"NM_181323",231293,"Mm.280211","NM_181323","ENSMUSG00000029154","Cwh43","C130090K23Rik|imds-60","cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)","protein-coding"]
[7235,"chr7",30664702,30665566,"+",0,"NA","promoter-TSS (NM_027999)","promoter-TSS (NM_027999)",-140,"NM_027999",71909,"Mm.290410","NM_027999","ENSMUSG00000078762","Haus5","2310022K01Rik","HAUS augmin-like complex, subunit 5","protein-coding"]
[598,"chr10",40141699,40142080,"+",0,"NA","exon (NM_028247, exon 1 of 3)","exon (NM_028247, exon 1 of 3)",365,"NM_028247",72472,"Mm.186778","NM_028247","ENSMUSG00000019838","Slc16a10","2610103N14Rik|9830169E08|Mct10|PRO0813|TAT1","solute carrier family 16 (monocarboxylic acid transporters), member 10","protein-coding"]
[780,"chr10",81355733,81358172,"+",0,"NA","promoter-TSS (NM_028657)","promoter-TSS (NM_028657)",-618,"NM_028657",73822,"Mm.182281","NM_028657","ENSMUSG00000034854","Mfsd12","C19orf28|F630110N24Rik|Wdt1","major facilitator superfamily domain containing 12","protein-coding"]
[240,"chr1",93343258,93344049,"+",0,"NA","promoter-TSS (NM_023200)","promoter-TSS (NM_023200)",8,"NM_023200",66385,"Mm.88704","NM_023200",null,"Ppp1r7","2310014J01Rik|SDS22","protein phosphatase 1, regulatory (inhibitor) subunit 7","protein-coding"]
[115,"chr1",58422571,58424385,"+",0,"NA","intron (NM_001042634, intron 1 of 12)","CpG",610,"NR_027853",12747,"Mm.1761","NM_009905","ENSMUSG00000026034","Clk1","STY","CDC-like kinase 1","protein-coding"]
[7606,"chr7",127232493,127233565,"+",0,"NA","promoter-TSS (NM_146201)","promoter-TSS (NM_146201)",101,"NR_030674",100043580,"Mm.482209","NR_030674",null,"Gm4532","-","predicted gene 4532","ncRNA"]
[2319,"chr13",113793968,113795072,"+",0,"NA","promoter-TSS (NM_172595)","promoter-TSS (NM_172595)",12,"NM_172595",218639,"Mm.79837","NM_172595","ENSMUSG00000042348","Arl15","A430036I03|Arfrp2|C230032K13Rik","ADP-ribosylation factor-like 15","protein-coding"]
[2772,"chr15",76189488,76201129,"+",0,"NA","intron (NM_011117, intron 1 of 31)","intron (NM_011117, intron 1 of 31)",402,"NM_201394",18810,"Mm.234912","NM_011117","ENSMUSG00000022565","Plec","AA591047|AU042537|EBS1|PCN|PLTN|Plec1","plectin","protein-coding"]
[1277,"chr11",74898113,74898600,"+",0,"NA","intron (NM_177325, intron 1 of 14)","intron (NM_177325, intron 1 of 14)",276,"NM_177325",104662,"Mm.220843","NM_177325","ENSMUSG00000038335","Tsr1","AU040765|AW550801|mKIAA1401","TSR1 20S rRNA accumulation","protein-coding"]
[2562,"chr14",70442682,70443974,"+",0,"NA","promoter-TSS (NM_001164082)","promoter-TSS (NM_001164082)",-101,"NM_001164082",67065,"Mm.20420","NM_025945","ENSMUSG00000000776","Polr3d","2810426M17Rik|44kDa|AI326118|AW489084|BN51T|RPC4|TSBN51","polymerase (RNA) III (DNA directed) polypeptide D","protein-coding"]
[3094,"chr16",22008746,22010228,"+",0,"NA","promoter-TSS (NR_027488)","promoter-TSS (NR_027488)",3,"NR_027488",75826,"Mm.297431","NM_029457","ENSMUSG00000022855","Senp2","2310007L05Rik|4930538C18Rik|AI646780|AW554757|Smt3ip2|SuPr-1|mKIAA1331","SUMO/sentrin specific peptidase 2","protein-coding"]
[4642,"chr2",104711712,104712400,"+",0,"NA","5' UTR (NM_177190, exon 1 of 10)","5' UTR (NM_177190, exon 1 of 10)",106,"NM_177190",320554,"Mm.249065","NM_177190","ENSMUSG00000027175","Tcp11l1","C130096D04Rik","t-complex 11 like 1","protein-coding"]
[3800,"chr18",25168252,25169401,"+",0,"NA","promoter-TSS (NM_001004361)","promoter-TSS (NM_001004361)",51,"NM_001142698",66648,"Mm.263189","NM_001004361","ENSMUSG00000024269","Tpgs2","5730437P09Rik|5730494M16Rik|AI666318|Pgs2","tubulin polyglutamylase complex subunit 2","protein-coding"]
[8988,"chrY",1244974,1246009,"+",0,"NA","exon (NM_009484, exon 1 of 27)","exon (NM_009484, exon 1 of 27)",247,"NM_009484",22290,"Mm.20477","NM_009484","ENSMUSG00000068457","Uty","Hydb|mKIAA4057","ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome","protein-coding"]
[8839,"chrX",57392396,57392987,"+",0,"NA","intron (NM_001166623, intron 1 of 8)","CpG",345,"NM_011252",19655,"Mm.28275","NM_011252","ENSMUSG00000031134","Rbmx","hnRNP G","RNA binding motif protein, X chromosome","protein-coding"]
[1265,"chr11",72795209,72796687,"+",0,"NA","promoter-TSS (NM_001045536)","promoter-TSS (NM_001045536)",-109,"NM_001024926",192986,"Mm.194755","NM_001024926","ENSMUSG00000057778","Cyb5d2","9330151E16Rik|Gm2","cytochrome b5 domain containing 2","protein-coding"]
[544,"chr10",14543698,14546782,"+",0,"NA","promoter-TSS (NM_001002268)","promoter-TSS (NM_001002268)",-204,"NM_001002268",215798,"Mm.440142","NM_001002268","ENSMUSG00000039116","Adgrg6","1190004A11Rik|AI449247|AW045736|DREG|Gm222|Gpr126","adhesion G protein-coupled receptor G6","protein-coding"]
[4527,"chr2",59882288,59883429,"+",0,"NA","promoter-TSS (NM_001159636)","promoter-TSS (NM_001159636)",-252,"NM_028118",72137,"Mm.288734","NM_028118","ENSMUSG00000026988","Wdsub1","1700048E19Rik|2610014F08Rik","WD repeat, SAM and U-box domain containing 1","protein-coding"]
[1196,"chr11",64079166,64080339,"+",0,"NA","promoter-TSS (NM_178379)","promoter-TSS (NM_178379)",268,"NR_033780",66456,"Mm.124828","NR_033780","ENSMUSG00000087497","2810001G20Rik","AW045514","RIKEN cDNA 2810001G20 gene","ncRNA"]
[2635,"chr15",3994923,3996649,"+",0,"NA","promoter-TSS (NM_145930)","promoter-TSS (NM_145930)",-34,"NM_145930",106064,"Mm.21299","NM_145930","ENSMUSG00000041935","AW549877","AI195826","expressed sequence AW549877","protein-coding"]
[7961,"chr8",76901451,76902512,"+",0,"NA","promoter-TSS (NM_001083906)","promoter-TSS (NM_001083906)",-527,"NM_001083906",110784,"Mm.324393","NM_001083906","ENSMUSG00000031618","Nr3c2","MR|Mlr","nuclear receptor subfamily 3, group C, member 2","protein-coding"]
[4140,"chr19",18629970,18632194,"+",0,"NA","promoter-TSS (NM_145497)","promoter-TSS (NM_145497)",731,"NM_017375",20409,"Mm.172222","NM_017375",null,"Ostf1","C78236|SH3P2|Sh3d3","osteoclast stimulating factor 1","protein-coding"]
[4876,"chr2",155956267,155956884,"+",0,"NA","promoter-TSS (NM_008383)","promoter-TSS (NM_008383)",17,"NM_177217",16328,"Mm.288729","NM_008383","ENSMUSG00000038241","Cep250","AW490617|B230210E21Rik|Cep2|Inmp","centrosomal protein 250","protein-coding"]
[2873,"chr15",85334027,85337322,"+",0,"NA","promoter-TSS (NM_016843)","promoter-TSS (NM_016843)",-707,"NM_016843",54138,"Mm.248906","NM_016843","ENSMUSG00000016541","Atxn10","AI325283|C77170|E46|Sca10|TEG-169|Tex169","ataxin 10","protein-coding"]
[1314,"chr11",78174627,78181165,"+",0,"NA","promoter-TSS (NM_026708)","promoter-TSS (NM_026708)",-253,"NM_001291235",68385,"Mm.390375","NM_026708","ENSMUSG00000019437","Tlcd1","-","TLC domain containing 1","protein-coding"]
[2535,"chr14",63859709,63860894,"+",0,"NA","promoter-TSS (NM_028228)","promoter-TSS (NM_028228)",-11,"NM_028228",72400,"Mm.379214","NM_028228","ENSMUSG00000021958","Pinx1","2210403I16Rik|2610028A01Rik|67-11-3|AU024023|LPTS|LPTS1","PIN2/TERF1 interacting, telomerase inhibitor 1","protein-coding"]
[7817,"chr8",33641212,33642426,"+",0,"NA","intron (NM_178648, intron 1 of 7)","CpG",157,"NM_178648",108159,"Mm.29301","NM_178648","ENSMUSG00000052906","Ubxn8","D0H8S2298E|Rep-8|Rep8h|Ubxd6","UBX domain protein 8","protein-coding"]
[8565,"chr9",88480880,88485151,"+",0,"NA","promoter-TSS (NM_001284328)","promoter-TSS (NM_001284328)",-618,"NM_001284328",56403,"Mm.260545","NM_019666","ENSMUSG00000032423","Syncrip","2610109K23Rik|4632417O19Rik|GRY-RBP|Nsap1|Nsap1l|pp68","synaptotagmin binding, cytoplasmic RNA interacting protein","protein-coding"]
[2884,"chr15",88732830,88734958,"+",0,"NA","intron (NM_001033274, intron 1 of 12)","intron (NM_001033274, intron 1 of 12)",325,"NM_001033274",223770,"Mm.254438","NM_001033274","ENSMUSG00000022387","Brd1","1110059H06Rik|AI316859|mKIAA4191","bromodomain containing 1","protein-coding"]
[1324,"chr11",78534438,78537712,"+",0,"NA","promoter-TSS (NM_018854)","promoter-TSS (NM_018854)",185,"NM_001159392",21927,"Mm.386774","NM_009395","ENSMUSG00000017615","Tnfaip1","Edp-1|Edp1|Tnfip1","tumor necrosis factor, alpha-induced protein 1 (endothelial)","protein-coding"]
[8605,"chr9",103304796,103305750,"+",0,"NA","promoter-TSS (NM_176979)","promoter-TSS (NM_176979)",-54,"NM_176979",235559,"Mm.259893","NM_176979","ENSMUSG00000032555","Topbp1","1110031N14Rik|2810429C13Rik|AI256758|D430026L04Rik|mKIAA0259","topoisomerase (DNA) II binding protein 1","protein-coding"]
[6794,"chr6",72544049,72546606,"+",0,"NA","intron (NM_001271415, intron 2 of 10)","intron (NM_001271415, intron 2 of 10)",790,"NM_001271415",12332,"Mm.18626","NM_007599","ENSMUSG00000056737","Capg","gCap39|mbh1","capping protein (actin filament), gelsolin-like","protein-coding"]
[3477,"chr17",33683543,33686087,"+",0,"NA","TTS (NM_145486)","TTS (NM_145486)",643,"NM_001109913",76936,"Mm.311439","NM_029804","ENSMUSG00000059208","Hnrnpm","2610023M21Rik|AA409009|Hnrpm|mKIAA4193","heterogeneous nuclear ribonucleoprotein M","protein-coding"]
[6138,"chr5",33651838,33652632,"+",0,"NA","TTS (NM_026698)","TTS (NM_026698)",339,"NM_001289725",20492,"Mm.4172","NM_009193","ENSMUSG00000004642","Slbp","-","stem-loop binding protein","protein-coding"]
[8302,"chr9",21926912,21928286,"+",0,"NA","promoter-TSS (NM_178577)","promoter-TSS (NM_178577)",-64,"NM_001253870",235043,"Mm.253329","NM_178577","ENSMUSG00000040883","Tmem205","-","transmembrane protein 205","protein-coding"]
[7641,"chr7",128744599,128745509,"+",0,"NA","exon (NM_001029982, exon 1 of 19)","exon (NM_001029982, exon 1 of 19)",184,"NM_001029982",207352,"Mm.297105","NM_001029982","ENSMUSG00000055319","Sec23ip","D7Ertd373e|p125","Sec23 interacting protein","protein-coding"]
[404,"chr1",169968681,169970134,"+",0,"NA","promoter-TSS (NM_010476)","promoter-TSS (NM_010476)",-2,"NR_040438",67303,"Mm.396611","NR_040438","ENSMUSG00000097503","3110045C21Rik","AI838577","RIKEN cDNA 3110045C21 gene","ncRNA"]
[5649,"chr4",107066319,107067459,"+",0,"NA","promoter-TSS (NM_025500)","promoter-TSS (NM_025500)",-23,"NM_025500",56280,"Mm.29517","NM_025500","ENSMUSG00000028622","Mrpl37","2300004O14Rik|AI132596|MRP-L2|Rpml2","mitochondrial ribosomal protein L37","protein-coding"]
[4383,"chr2",25428776,25429138,"+",0,"NA","intron (NM_007379, intron 1 of 47)","CpG",283,"NM_007379",11305,"Mm.2210","NM_007379","ENSMUSG00000026944","Abca2","AI413825|Abc2|D2H0S1474E|mKIAA1062","ATP-binding cassette, sub-family A (ABC1), member 2","protein-coding"]
[6907,"chr6",115037099,115037868,"+",0,"NA","intron (NM_026894, intron 1 of 7)","intron (NM_026894, intron 1 of 7)",391,"NM_026894",68971,"Mm.24937","NM_026894","ENSMUSG00000030316","Tamm41","1500001M20Rik|TAM41","TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)","protein-coding"]
[6582,"chr5",144222951,144224696,"+",0,"NA","promoter-TSS (NM_027410)","promoter-TSS (NM_027410)",-245,"NM_027410",70381,"Mm.239412","NM_027410","ENSMUSG00000066621","Tecpr1","2210010N04Rik|mKIAA1358","tectonin beta-propeller repeat containing 1","protein-coding"]
[6648,"chr6",17692986,17695085,"+",0,"NA","promoter-TSS (NM_001289626)","promoter-TSS (NM_001289626)",41,"NM_001289625",64213,"Mm.12051","NM_022332","ENSMUSG00000029534","St7","9430001H04Rik|Fam4a2|HELG|RAY1|SEN4|TSG7","suppression of tumorigenicity 7","protein-coding"]
[2132,"chr13",49681580,49683188,"+",0,"NA","intron (NM_172015, intron 1 of 33)","intron (NM_172015, intron 1 of 33)",254,"NM_172015",105148,"Mm.21118","NM_172015","ENSMUSG00000037851","Iars","2510016L12Rik|AI327140|AU044614|E430001P04Rik|ILRS","isoleucine-tRNA synthetase","protein-coding"]
[3751,"chr18",6135156,6137854,"+",0,"NA","promoter-TSS (NM_029277)","promoter-TSS (NM_029277)",-407,"NM_001039692",75415,"Mm.239675","NM_029277","ENSMUSG00000041225","Arhgap12","2810011M08Rik","Rho GTPase activating protein 12","protein-coding"]
[7331,"chr7",46795181,46796669,"+",0,"NA","promoter-TSS (NM_008186)","promoter-TSS (NM_008186)",-44,"NM_001005247",246694,"Mm.379442","NM_178742","ENSMUSG00000014418","Hps5","AI646796|AL022647|C85120|haze|hz|maroon|mr|ru-2|ru2","Hermansky-Pudlak syndrome 5 homolog (human)","protein-coding"]
[1736,"chr12",17689660,17691230,"+",0,"NA","promoter-TSS (NM_016677)","promoter-TSS (NM_016677)",-369,"NM_016677",53602,"Mm.313619","NM_016677","ENSMUSG00000071379","Hpcal1","NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3","hippocalcin-like 1","protein-coding"]
[958,"chr11",4160113,4160785,"+",0,"NA","promoter-TSS (NM_177616)","promoter-TSS (NM_177616)",95,"NM_026175",67465,"Mm.156914","NM_026175","ENSMUSG00000002129","Sf3a1","1200014H24Rik|5930416L09Rik|AI159724","splicing factor 3a, subunit 1","protein-coding"]
[1978,"chr12",111907327,111908900,"+",0,"NA","promoter-TSS (NM_011625)","promoter-TSS (NM_011625)",-58,"NM_011625",21981,"Mm.313076","NM_011625","ENSMUSG00000021285","Ppp1r13b","AI449786|ASPP1|AW545810|Tp53bp2|Trp53bp2|p85","protein phosphatase 1, regulatory (inhibitor) subunit 13B","protein-coding"]
[8262,"chr9",18291790,18293402,"+",0,"NA","intron (NM_025844, intron 1 of 10)","CpG",329,"NM_025844",66917,"Mm.103534","NM_025844","ENSMUSG00000001774","Chordc1","1110001O09Rik|AA409036|Chp-1|morgana","cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1","protein-coding"]
[8536,"chr9",77543297,77545867,"+",0,"NA","promoter-TSS (NM_172528)","promoter-TSS (NM_172528)",270,"NM_001146048",214345,"Mm.28534","NM_172528","ENSMUSG00000032352","Lrrc1","A430093J20Rik|AU016091|D030059I21|mKIAA4018","leucine rich repeat containing 1","protein-coding"]
[793,"chr10",82699172,82699864,"+",0,"NA","intron (NM_001081218, intron 1 of 14)","CpG",511,"NM_001081218",67933,"Mm.127405","NM_026462","ENSMUSG00000020246","Hcfc2","1700129L13Rik|AU019838","host cell factor C2","protein-coding"]
[3625,"chr17",53566942,53570713,"+",0,"NA","intron (NM_020005, intron 1 of 17)","MER5A1|DNA|hAT-Charlie",1856,"NM_020005",18519,"Mm.255025","NM_020005","ENSMUSG00000000708","Kat2b","A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF","K(lysine) acetyltransferase 2B","protein-coding"]
[3329,"chr17",23192901,23193844,"+",0,"NA","promoter-TSS (NM_009555)","promoter-TSS (NM_009555)",-144,"NM_009555",22700,"Mm.486936","NM_009555","ENSMUSG00000002617","Zfp40","CTfin12|NTfin12|Zfp-40","zinc finger protein 40","protein-coding"]
[6103,"chr5",30154282,30156390,"+",0,"NA","promoter-TSS (NM_178878)","promoter-TSS (NM_178878)",83,"NM_001289798",231086,"Mm.291463","NM_145558","ENSMUSG00000059447","Hadhb","4930479F15Rik|Mtpb|TP-beta","hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit","protein-coding"]
[5939,"chr4",141241012,141243155,"+",0,"NA","promoter-TSS (NM_172520)","promoter-TSS (NM_172520)",-801,"NM_172520",213649,"Mm.134460","NM_172520","ENSMUSG00000028919","Arhgef19","6030432F23|6430573B13Rik|WGEF","Rho guanine nucleotide exchange factor (GEF) 19","protein-coding"]
[8203,"chr8",123064863,123066265,"+",0,"NA","promoter-TSS (NM_153176)","promoter-TSS (NM_153176)",56,"NM_153176",234847,"Mm.292075","NM_153176","ENSMUSG00000000738","Spg7","AI452278|AU015315|Cmar|PGN","spastic paraplegia 7 homolog (human)","protein-coding"]
[2480,"chr14",54924081,54927761,"+",0,"NA","5' UTR (NM_010112, exon 1 of 6)","5' UTR (NM_010112, exon 1 of 6)",867,"NM_010112",13644,"Mm.236438","NM_010112","ENSMUSG00000022203","Efs","-","embryonal Fyn-associated substrate","protein-coding"]
[5657,"chr4",107921608,107924525,"+",0,"NA","intron (NM_009949, intron 1 of 4)","intron (NM_009949, intron 1 of 4)",523,"NM_009949",12896,"Mm.307620","NM_009949","ENSMUSG00000028607","Cpt2","AI323697|CPTII","carnitine palmitoyltransferase 2","protein-coding"]
[2368,"chr14",21498727,21502308,"+",0,"NA","intron (NM_017479, intron 1 of 16)","CpG",732,"NM_017479",54169,"Mm.248967","NM_017479","ENSMUSG00000021767","Kat6b","AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf","K(lysine) acetyltransferase 6B","protein-coding"]
[8985,"chrX",169879753,169881764,"+",0,"NA","intron (NM_001290505, intron 1 of 9)","intron (NM_001290505, intron 1 of 9)",1139,"NM_001290505",17318,"Mm.34441","NM_010797","ENSMUSG00000035299","Mid1","61B3-R|DXHXS1141|Fxy|Trim18","midline 1","protein-coding"]
[2784,"chr15",76538332,76539291,"+",0,"NA","promoter-TSS (NM_013909)","promoter-TSS (NM_013909)",-65,"NM_013909",30840,"Mm.275279","NM_013909","ENSMUSG00000022559","Fbxl6","AU021795|Fbl6","F-box and leucine-rich repeat protein 6","protein-coding"]
[5516,"chr4",43492276,43493694,"+",0,"NA","promoter-TSS (NR_001460)","promoter-TSS (NR_001460)",74,"NR_001460",19782,null,"NR_001460","ENSMUSG00000088088","Rmrp","1110032O22Rik|Rmrpr","RNA component of mitochondrial RNAase P","ncRNA"]
[331,"chr1",143701878,143703259,"+",0,"NA","exon (NM_145991, exon 1 of 17)","exon (NM_145991, exon 1 of 17)",325,"NM_145991",214498,"Mm.156727","NM_145991",null,"Cdc73","8430414L16Rik|C130030P16Rik|C81219|Hrpt2","cell division cycle 73, Paf1/RNA polymerase II complex component","protein-coding"]
[6984,"chr6",129180616,129183176,"+",0,"NA","intron (NM_053109, intron 1 of 4)","intron (NM_053109, intron 1 of 4)",1281,"NM_053109",93694,"Mm.197536","NM_053109","ENSMUSG00000030157","Clec2d","Clr-b|Clrb|Ocil","C-type lectin domain family 2, member d","protein-coding"]
[2228,"chr13",74316190,74317812,"+",0,"NA","intron (NM_011051, intron 1 of 5)","G-rich|Low_complexity|Low_complexity",325,"NM_011051",18570,"Mm.24254","NM_011051","ENSMUSG00000021576","Pdcd6","AV299538|Alg2|MA-3|PS2|alg-2","programmed cell death 6","protein-coding"]
[6843,"chr6",87042100,87043398,"+",0,"NA","promoter-TSS (NM_013528)","promoter-TSS (NM_013528)",-97,"NM_013528",14583,"Mm.19893","NM_013528","ENSMUSG00000029992","Gfpt1","2810423A18Rik|AI324119|AI449986|GFA|GFAT|GFAT1|GFAT1m|Gfpt","glutamine fructose-6-phosphate transaminase 1","protein-coding"]
[8665,"chr9",108515937,108518988,"+",0,"NA","intron (NM_175143, intron 1 of 9)","CpG",375,"NM_175143",69232,"Mm.335449","NM_175143","ENSMUSG00000006673","Qrich1","2610028H07Rik","glutamine-rich 1","protein-coding"]
[7873,"chr8",61589852,61591163,"+",0,"NA","intron (NM_001293772, intron 10 of 21)","(GA)n|Simple_repeat|Simple_repeat",662,"NM_001293774",72333,"Mm.29933","NM_001081390","ENSMUSG00000058056","Palld","2410003B16Rik|6030492A02","palladin, cytoskeletal associated protein","protein-coding"]
[2365,"chr14",20836210,20838042,"+",0,"NA","exon (NM_008873, exon 2 of 11)","exon (NM_008873, exon 2 of 11)",464,"NM_008873",18792,"Mm.4183","NM_008873","ENSMUSG00000021822","Plau","u-PA|uPA","plasminogen activator, urokinase","protein-coding"]
[1263,"chr11",72606803,72608791,"+",0,"NA","intron (NM_025985, intron 1 of 5)","CpG",536,"NM_025985",67128,"Mm.458052","NM_025985","ENSMUSG00000020794","Ube2g1","2700059C12Rik|AI256795|AU014992|AW552068|D130023C12Rik","ubiquitin-conjugating enzyme E2G 1","protein-coding"]
[7462,"chr7",99550402,99551231,"+",0,"NA","intron (NM_177231, intron 1 of 15)","ORR1D1|LTR|ERVL-MaLR",-1453,"NR_029760",723840,null,"NR_029760","ENSMUSG00000065571","Mir326","Mirn326|mir-326|mmu-mir-326","microRNA 326","ncRNA"]
[8108,"chr8",106150036,106150720,"+",0,"NA","promoter-TSS (NM_133792)","promoter-TSS (NM_133792)",-21,"NM_133792",192654,"Mm.284770","NM_133792","ENSMUSG00000031903","Pla2g15","ACS|C87498|LLPL|Lpla2|Lypla3","phospholipase A2, group XV","protein-coding"]
[5667,"chr4",109115549,109119372,"+",0,"NA","intron (NM_133885, intron 4 of 22)","intron (NM_133885, intron 4 of 22)",576,"NM_173350",100273,"Mm.366315","NM_133885","ENSMUSG00000028559","Osbpl9","2600011I06Rik|AU015843|Orp-9","oxysterol binding protein-like 9","protein-coding"]
[5947,"chr4",141792622,141794299,"+",0,"NA","promoter-TSS (NM_015733)","promoter-TSS (NM_015733)",-152,"NM_015733",12371,"Mm.88829","NM_015733","ENSMUSG00000028914","Casp9","AI115399|APAF-3|AW493809|CASP-9|Caspase-9|ICE-LAP6|Mch6","caspase 9","protein-coding"]
[7275,"chr7",43579056,43580232,"+",0,"NA","promoter-TSS (NM_172482)","promoter-TSS (NM_172482)",58,"NM_172482",210105,"Mm.234422","NM_172482","ENSMUSG00000030469","Zfp719","8030458J18|9430094P17Rik|C630016O21Rik|mszf6","zinc finger protein 719","protein-coding"]
[8401,"chr9",52167896,52169248,"+",0,"NA","promoter-TSS (NM_001162921)","promoter-TSS (NM_001162921)",-461,"NM_001162921",244871,"Mm.295686","NM_001162921","ENSMUSG00000035164","Zc3h12c","A230108E06|C230027N18Rik|mKIAA1726","zinc finger CCCH type containing 12C","protein-coding"]
[4466,"chr2",32570322,32571887,"+",0,"NA","intron (NM_010073, intron 1 of 3)","intron (NM_010073, intron 1 of 3)",246,"NM_010073",13481,"Mm.22001","NM_010073","ENSMUSG00000026810","Dpm2","AW557993|R75484","dolichol-phosphate (beta-D) mannosyltransferase 2","protein-coding"]
[5601,"chr4",85205093,85205872,"+",0,"NA","promoter-TSS (NM_019535)","promoter-TSS (NM_019535)",26,"NM_019535",20404,"Mm.143603","NM_019535","ENSMUSG00000028488","Sh3gl2","9530001L19Rik|AI120490|AW555077|B930049H17Rik|EEN-B1|SH3PA|Sh3d2a","SH3-domain GRB2-like 2","protein-coding"]
[6190,"chr5",52833363,52834965,"+",0,"NA","promoter-TSS (NM_024213)","promoter-TSS (NM_024213)",29,"NM_024213",52206,"Mm.272568","NM_024213",null,"Anapc4","2610306D21Rik|APC4|D5Ertd249e","anaphase promoting complex subunit 4","protein-coding"]
[627,"chr10",52381107,52383866,"+",0,"NA","promoter-TSS (NM_053187)","promoter-TSS (NM_053187)",-362,"NM_001199272",94221,"Mm.390258","NM_053187","ENSMUSG00000019861","Gopc","2210402P09Rik|AI844555|CAL|FIG|GOPC1|PIST","golgi associated PDZ and coiled-coil motif containing","protein-coding"]
[6844,"chr6",87335286,87335729,"+",0,"NA","5' UTR (NM_054041, exon 1 of 18)","5' UTR (NM_054041, exon 1 of 18)",268,"NM_054041",69538,"Mm.232525","NM_054041","ENSMUSG00000033420","Antxr1","2310008J16Rik|2810405N18Rik|Antrx1|Tem8","anthrax toxin receptor 1","protein-coding"]
[1425,"chr11",96074824,96076372,"+",0,"NA","promoter-TSS (NM_007506)","promoter-TSS (NM_007506)",33,"NM_001161419",11951,"Mm.258","NM_007506",null,"Atp5g1","-","ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9)","protein-coding"]
[8741,"chr9",122886879,122887184,"+",0,"NA","Intergenic","CpG",-1440,"NM_001177505",382118,"Mm.86999","NM_001177505","ENSMUSG00000063488","Zkscan7","BC042569|Zfp167","zinc finger with KRAB and SCAN domains 7","protein-coding"]
[3881,"chr18",49979046,49980813,"+",0,"NA","intron (NM_001177759, intron 1 of 1)","intron (NM_001177759, intron 1 of 1)",502,"NM_001177759",106869,"Mm.27740","NM_134131","ENSMUSG00000062210","Tnfaip8","AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2","tumor necrosis factor, alpha-induced protein 8","protein-coding"]
[752,"chr10",80264426,80265684,"+",0,"NA","promoter-TSS (NM_133188)","promoter-TSS (NM_133188)",64,"NM_133188",70248,"Mm.148693","NM_133188","ENSMUSG00000069565","Dazap1","2410042M16Rik|mPrrp","DAZ associated protein 1","protein-coding"]
[2899,"chr15",90677629,90680047,"+",0,"NA","intron (NM_025815, intron 1 of 19)","intron (NM_025815, intron 1 of 19)",550,"NM_025815",66871,"Mm.290991","NM_025815","ENSMUSG00000052560","Cpne8","1200003E11Rik|1500031E20Rik","copine VIII","protein-coding"]
[7282,"chr7",43841180,43842646,"+",0,"NA","promoter-TSS (NM_026806)","promoter-TSS (NM_026806)",-356,"NM_026806",68668,"Mm.458122","NM_026806","ENSMUSG00000074155","Klk5","1110030O19Rik","kallikrein related-peptidase 5","protein-coding"]
[6260,"chr5",91962258,91963632,"+",0,"NA","promoter-TSS (NR_028429)","promoter-TSS (NR_028429)",63,"NR_028429",381650,"Mm.159453","NR_028429","ENSMUSG00000102644","Thap6","4930534K21Rik|AI448650","THAP domain containing 6","pseudo"]
[2260,"chr13",93303098,93304764,"+",0,"NA","promoter-TSS (NM_147176)","promoter-TSS (NM_147176)",-564,"NM_147176",26556,"Mm.37533","NM_011982",null,"Homer1","PSD-Zip45|SYN47|Ves-1|homer-1|vesl-1","homer homolog 1 (Drosophila)","protein-coding"]
[6176,"chr5",44225955,44227428,"+",0,"NA","promoter-TSS (NM_173764)","promoter-TSS (NM_173764)",-85,"NM_173764",231225,"Mm.30688","NM_173764","ENSMUSG00000046985","Tapt1","4932414K18Rik","transmembrane anterior posterior transformation 1","protein-coding"]
[312,"chr1",134454845,134456277,"+",0,"NA","promoter-TSS (NM_001311136)","promoter-TSS (NM_001311136)",30,"NM_001311136",240756,"Mm.87398","NM_153128","ENSMUSG00000026455","Klhl12","C3ip1","kelch-like 12","protein-coding"]
[7804,"chr8",26118451,26120187,"+",0,"NA","promoter-TSS (NM_029965)","promoter-TSS (NM_029965)",-61,"NM_029965",77733,"Mm.291906","NM_029965","ENSMUSG00000013878","Rnf170","6720407G21Rik|AI481227","ring finger protein 170","protein-coding"]
[4837,"chr2",152293495,152295041,"+",0,"NA","intron (NM_024196, intron 1 of 7)","CpG",396,"NM_024196",67231,"Mm.288733","NM_024196",null,"Tbc1d20","1110028I04Rik|2810442O16Rik|AI414693","TBC1 domain family, member 20","protein-coding"]
[370,"chr1",160211978,160213805,"+",0,"NA","promoter-TSS (NM_009786)","promoter-TSS (NM_009786)",1,"NM_009786",12301,"Mm.10702","NM_009786","ENSMUSG00000014226","Cacybp","SIP","calcyclin binding protein","protein-coding"]
[3398,"chr17",26252300,26253804,"+",0,"NA","exon (NM_025881, exon 1 of 9)","exon (NM_025881, exon 1 of 9)",142,"NR_037905",66978,"Mm.440216","NM_025881","ENSMUSG00000024188","Luc7l","1810045C04Rik|2410018D03Rik","Luc7 homolog (S. cerevisiae)-like","protein-coding"]
[8170,"chr8",119344528,119345040,"+",0,"NA","intron (NM_024219, intron 1 of 3)","intron (NM_024219, intron 1 of 3)",246,"NM_024219",68196,"Mm.358714","NM_024219","ENSMUSG00000031839","Hsbp1","0610007A03Rik|AA408769|Hsp25","heat shock factor binding protein 1","protein-coding"]
[5511,"chr4",43025100,43025799,"+",0,"NA","5' UTR (NM_020035, exon 1 of 10)","5' UTR (NM_020035, exon 1 of 10)",325,"NM_020035",56703,"Mm.143738","NM_020035","ENSMUSG00000028454","Pigo","PIG-O","phosphatidylinositol glycan anchor biosynthesis, class O","protein-coding"]
[1365,"chr11",84915921,84916283,"+",0,"NA","exon (NM_001005223, exon 2 of 5)","exon (NM_001005223, exon 2 of 5)",254,"NM_001005223",448850,"Mm.379733","NM_001005223","ENSMUSG00000020526","Znhit3","Myohd1|Trip3","zinc finger, HIT type 3","protein-coding"]
[8727,"chr9",120955552,120955740,"+",0,"NA","TTS (NR_106058)","TTS (NR_106058)",560,"NR_106058",102465661,null,"NR_106058","ENSMUSG00000106193","Mir7090","mmu-mir-7090","microRNA 7090","ncRNA"]
[5040,"chr3",32528976,32530032,"+",0,"NA","promoter-TSS (NM_024200)","promoter-TSS (NM_024200)",22,"NM_024200",67414,"Mm.290414","NM_024200","ENSMUSG00000027668","Mfn1","2310002F04Rik|6330416C07Rik|D3Ertd265e|HR2|mKIAA4032","mitofusin 1","protein-coding"]
[3575,"chr17",45506247,45507045,"+",0,"NA","promoter-TSS (NM_198608)","promoter-TSS (NM_198608)",-195,"NM_198608",224805,"Mm.329063","NM_198608","ENSMUSG00000023938","Aars2","Aarsl|AlaRS|Gm89","alanyl-tRNA synthetase 2, mitochondrial (putative)","protein-coding"]
[3031,"chr16",13779902,13782524,"+",0,"NA","intron (NM_001039521, intron 1 of 17)","intron (NM_001039521, intron 1 of 17)",514,"NM_001039521",106298,"Mm.288606","NM_001039521","ENSMUSG00000022682","Rrn3","AL023001|E130302O19Rik|R75565|TIF-1A|Tif1a","RRN3 RNA polymerase I transcription factor homolog (yeast)","protein-coding"]
[7767,"chr8",13785190,13786180,"+",0,"NA","promoter-TSS (NM_025924)","promoter-TSS (NM_025924)",70,"NM_025924",67031,"Mm.44858","NM_025924","ENSMUSG00000038398","Upf3a","2600001C03Rik|4930546M19Rik|RENT3A|UPF3","UPF3 regulator of nonsense transcripts homolog A (yeast)","protein-coding"]
[3112,"chr16",30008369,30010416,"+",0,"NA","intron (NR_033631, intron 1 of 2)","intron (NR_033631, intron 1 of 2)",725,"NR_033631",100043102,"Mm.30797","NR_033631","ENSMUSG00000097184","4632428C04Rik","Gm4231","RIKEN cDNA 4632428C04 gene","ncRNA"]
[2609,"chr14",103345544,103347422,"+",0,"NA","exon (NM_207215, exon 1 of 85)","exon (NM_207215, exon 1 of 85)",317,"NM_207215",105689,"Mm.6478","NM_207215","ENSMUSG00000033004","Mycbp2","AU023734|AW107953|AW546647|C130061D10Rik|Pam|Phr1|R75243","MYC binding protein 2","protein-coding"]
[5363,"chr3",131563999,131567181,"+",0,"NA","promoter-TSS (NM_001289477)","promoter-TSS (NM_001289477)",-442,"NM_001289477",23971,"Mm.244912","NM_011863","ENSMUSG00000028032","Papss1","AI325286|Asapk|SK1","3'-phosphoadenosine 5'-phosphosulfate synthase 1","protein-coding"]
[4741,"chr2",127070313,127070941,"+",0,"NA","promoter-TSS (NM_026678)","promoter-TSS (NM_026678)",-30,"NM_026678",109778,"Mm.22028","NM_026678","ENSMUSG00000001999","Blvra","0610006A11Rik|2500001N03Rik|Blvr","biliverdin reductase A","protein-coding"]
[7099,"chr7",17056386,17056656,"+",0,"NA","intron (NM_001162950, intron 1 of 14)","intron (NM_001162950, intron 1 of 14)",158,"NM_016868",53417,"Mm.135110","NM_016868","ENSMUSG00000004328","Hif3a","Ipas|MOP7|NEPAS|bHLHe17","hypoxia inducible factor 3, alpha subunit","protein-coding"]
[1858,"chr12",78748258,78749784,"+",0,"NA","promoter-TSS (NM_019579)","promoter-TSS (NM_019579)",74,"NM_019579",56217,"Mm.425777","NM_019579","ENSMUSG00000021112","Mpp5","3830420B02Rik|AI255216|AI644496|Pals1","membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)","protein-coding"]
[718,"chr10",78351877,78352836,"+",0,"NA","promoter-TSS (NM_053014)","promoter-TSS (NM_053014)",-656,"NM_053014",28169,"Mm.141230","NM_053014","ENSMUSG00000001211","Agpat3","AW061257|AW493985|D10Jhu12e|lpaat3","1-acylglycerol-3-phosphate O-acyltransferase 3","protein-coding"]
[4689,"chr2",119235936,119240180,"+",0,"NA","exon (NM_016907, exon 2 of 11)","exon (NM_016907, exon 2 of 11)",698,"NM_016907",20732,"Mm.104955","NM_016907","ENSMUSG00000027315","Spint1","HAI-1","serine protease inhibitor, Kunitz type 1","protein-coding"]
[6073,"chr5",23430760,23437253,"+",0,"NA","promoter-TSS (NM_026984)","promoter-TSS (NM_026984)",347,"NR_040469",269630,"Mm.425231","NR_040469","ENSMUSG00000073147","5031425E22Rik","-","RIKEN cDNA 5031425E22 gene","ncRNA"]
[4024,"chr19",5272208,5273647,"+",0,"NA","TTS (NM_030109)","TTS (NM_030109)",192,"NM_153129",107975,"Mm.234923","NM_153129","ENSMUSG00000024855","Pacs1","AI325977","phosphofurin acidic cluster sorting protein 1","protein-coding"]
[7487,"chr7",102064328,102066670,"+",0,"NA","promoter-TSS (NM_029211)","promoter-TSS (NM_029211)",8,"NM_001286689",102443350,"Mm.292904","NM_001286689","ENSMUSG00000070425","Xndc1","Xndr","Xrcc1 N-terminal domain containing 1","protein-coding"]
[2685,"chr15",35937553,35938132,"+",0,"NA","intron (NM_053071, intron 1 of 3)","CpG",404,"NM_053071",12864,"Mm.548","NM_053071","ENSMUSG00000014313","Cox6c","-","cytochrome c oxidase subunit VIc","protein-coding"]
[3978,"chr18",90508897,90510826,"+",0,"NA","promoter-TSS (NM_198295)","promoter-TSS (NM_198295)",-293,"NM_198295",67988,"Mm.268041","NM_198295","ENSMUSG00000024614","Tmx3","6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830","thioredoxin-related transmembrane protein 3","protein-coding"]
[3249,"chr16",91646312,91648745,"+",0,"NA","promoter-TSS (NM_178880)","promoter-TSS (NM_178880)",-296,"NM_019973",20658,"Mm.46401","NM_019973","ENSMUSG00000022961","Son","2900011L12Rik|AA409051|AU067731|C81487|mKIAA1019|nrebp","Son DNA binding protein","protein-coding"]
[4608,"chr2",91456585,91460435,"+",0,"NA","intron (NM_001145857, intron 1 of 11)","intron (NM_001145857, intron 1 of 11)",979,"NM_001145857",228357,"Mm.275149","NM_172668","ENSMUSG00000027253","Lrp4","6430526J12Rik|D230026E03|Megf7|mdig","low density lipoprotein receptor-related protein 4","protein-coding"]
[1878,"chr12",81630943,81631816,"+",0,"NA","5' UTR (NM_001033149, exon 1 of 3)","5' UTR (NM_001033149, exon 1 of 3)",130,"NM_001033149",69480,"Mm.130002","NM_001033149","ENSMUSG00000042734","Ttc9","-","tetratricopeptide repeat domain 9","protein-coding"]
[8144,"chr8",111094207,111094433,"+",0,"NA","promoter-TSS (NM_198308)","promoter-TSS (NM_198308)",-425,"NM_198308",319518,"Mm.28350","NM_198308",null,"Pdpr","4930402E16Rik|AU018056|mKIAA1990","pyruvate dehydrogenase phosphatase regulatory subunit","protein-coding"]
[8224,"chr8",124862601,124863643,"+",0,"NA","promoter-TSS (NM_025615)","promoter-TSS (NM_025615)",89,"NM_010322",14712,"Mm.29114","NM_010322","ENSMUSG00000031985","Gnpat","AU019525|D1Ertd819e|DHAPAT","glyceronephosphate O-acyltransferase","protein-coding"]
[8840,"chrX",60403795,60404766,"+",0,"NA","promoter-TSS (NM_001037863)","promoter-TSS (NM_001037863)",-299,"NM_001037863",320940,"Mm.490394","NM_001001798","ENSMUSG00000062949","Atp11c","A330005H02Rik|AI315324|Ig","ATPase, class VI, type 11C","protein-coding"]
[8470,"chr9",63398755,63399657,"+",0,"NA","promoter-TSS (NM_027090)","promoter-TSS (NM_027090)",38,"NM_027090",69478,"Mm.113942","NM_027090","ENSMUSG00000032403","2300009A05Rik","-","RIKEN cDNA 2300009A05 gene","protein-coding"]
[7727,"chr8",3278860,3280260,"+",0,"NA","promoter-TSS (NM_010568)","promoter-TSS (NM_010568)",57,"NM_010568",16337,"Mm.268003","NM_010568","ENSMUSG00000005534","Insr","4932439J01Rik|CD220|D630014A15Rik|IR|IR-A|IR-B","insulin receptor","protein-coding"]
[5704,"chr4",116650638,116651909,"+",0,"NA","intron (NM_021473, intron 1 of 8)","intron (NM_021473, intron 1 of 8)",401,"NM_021473",58810,"Mm.30085","NM_021473","ENSMUSG00000028692","Akr1a1","2610201A18Rik|Akr1a4","aldo-keto reductase family 1, member A1 (aldehyde reductase)","protein-coding"]
[6447,"chr5",124628000,124630424,"+",0,"NA","exon (NM_011596, exon 1 of 20)","exon (NM_011596, exon 1 of 20)",160,"NM_011596",21871,"Mm.1158","NM_011596","ENSMUSG00000038023","Atp6v0a2","8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2","ATPase, H+ transporting, lysosomal V0 subunit A2","protein-coding"]
[6435,"chr5",124094428,124096306,"+",0,"NA","intron (NM_019875, intron 1 of 11)","intron (NM_019875, intron 1 of 11)",431,"NM_019875",56325,"Mm.254839","NM_019875","ENSMUSG00000029408","Abcb9","TAPL|mKIAA1520","ATP-binding cassette, sub-family B (MDR/TAP), member 9","protein-coding"]
[72,"chr1",40266358,40267307,"+",0,"NA","5' UTR (NM_001123382, exon 1 of 11)","5' UTR (NM_001123382, exon 1 of 11)",246,"NM_001123382",16177,"Mm.896","NM_008362","ENSMUSG00000026072","Il1r1","CD121a|CD121b|IL-1R1|IL-iR|Il1r-1","interleukin 1 receptor, type I","protein-coding"]
[2781,"chr15",76343560,76344182,"+",0,"NA","intron (NM_025567, intron 1 of 6)","CpG",348,"NM_025567",66445,"Mm.29196","NM_025567","ENSMUSG00000022551","Cyc1","2610002H19Rik|AA408921","cytochrome c-1","protein-coding"]
[8234,"chr8",129233853,129234340,"+",0,"NA","promoter-TSS (NM_153780)","promoter-TSS (NM_153780)",-50,"NM_153780",72139,"Mm.426514","NM_153780","ENSMUSG00000071302","2610044O15Rik8","2610044O15Rik","RIKEN cDNA 2610044O15 gene","protein-coding"]
[2444,"chr14",48446097,48447018,"+",0,"NA","non-coding (NR_132324, exon 1 of 14)","non-coding (NR_132324, exon 1 of 14)",205,"NR_132324",218989,"Mm.85211","NM_172600","ENSMUSG00000036339","Tmem260","5930435P15|6720456H20Rik","transmembrane protein 260","protein-coding"]
[3921,"chr18",65619845,65622815,"+",0,"NA","intron (NM_207255, intron 2 of 5)","intron (NM_207255, intron 2 of 5)",-1715,"NR_105742",100526497,null,"NR_105742","ENSMUSG00000077113","Mir466p","mmu-mir-466p","microRNA 466p","ncRNA"]
[5754,"chr4",122995287,122996992,"+",0,"NA","exon (NM_001303121, exon 1 of 3)","exon (NM_001303121, exon 1 of 3)",208,"NM_008506",16918,"Mm.1055","NM_008506","ENSMUSG00000028654","Mycl","AW536278|L-myc|Lmyc-1|Lmyc1|Mycl1|bHLHe38","v-myc myelocytomatosis viral oncogene homolog, lung carcinoma derived (avian)","protein-coding"]
[3252,"chr16",92057757,92058627,"+",0,"NA","promoter-TSS (NM_080456)","promoter-TSS (NM_080456)",-130,"NM_017391",53881,"Mm.217354","NM_017391","ENSMUSG00000089774","Slc5a3","AA623876|BF642829|Smit1","solute carrier family 5 (inositol transporters), member 3","protein-coding"]
[4183,"chr19",33392122,33392381,"+",0,"NA","promoter-TSS (NM_001146342)","promoter-TSS (NM_001146342)",44,"NM_001167818",67795,"Mm.204591","NM_001146342","ENSMUSG00000071573","Rnls","6530404N21Rik|AI452315|AW060440|C10orf59","renalase, FAD-dependent amine oxidase","protein-coding"]
[3714,"chr17",80061188,80062222,"+",0,"NA","exon (NM_144802, exon 1 of 13)","exon (NM_144802, exon 1 of 13)",563,"NM_144802",72692,"Mm.64579","NM_144802","ENSMUSG00000024095","Hnrnpll","2510028H02Rik|2810036L13Rik|AI256697|AI852082|Hnrpll","heterogeneous nuclear ribonucleoprotein L-like","protein-coding"]
[6509,"chr5",137045331,137045899,"+",0,"NA","intron (NM_007457, intron 1 of 4)","intron (NM_007457, intron 1 of 4)",445,"NM_007457",11769,"Mm.833","NM_007457","ENSMUSG00000004849","Ap1s1","AP19","adaptor protein complex AP-1, sigma 1","protein-coding"]
[7900,"chr8",70171971,70172771,"+",0,"NA","promoter-TSS (NR_122028)","promoter-TSS (NR_122028)",-37,"NM_145597",234371,"Mm.23488","NM_145597","ENSMUSG00000002342","Tmem161a","AI428876|BB161850|BC021367","transmembrane protein 161A","protein-coding"]
[2511,"chr14",57570839,57572276,"+",0,"NA","promoter-TSS (NM_026526)","promoter-TSS (NM_026526)",12,"NM_026526",68043,"Mm.45225","NM_026526","ENSMUSG00000021951","N6amt2","2510005D08Rik|AW045965|Ayu21-96|Gt(pU21)96Imeg|GtAyu21-96","N-6 adenine-specific DNA methyltransferase 2 (putative)","protein-coding"]
[5943,"chr4",141544613,141547555,"+",0,"NA","promoter-TSS (NR_030695)","promoter-TSS (NR_030695)",-78,"NR_030695",320456,"Mm.32859","NM_177163",null,"B330016D10Rik","-","RIKEN cDNA B330016D10 gene","ncRNA"]
[6946,"chr6",122819447,122820883,"+",0,"NA","promoter-TSS (NM_021899)","promoter-TSS (NM_021899)",-19,"NM_021899",60611,"Mm.87142","NM_021899","ENSMUSG00000003154","Foxj2","Fhx","forkhead box J2","protein-coding"]
[2666,"chr15",25943255,25944209,"+",0,"NA","intron (NM_001277317, intron 1 of 6)","intron (NM_001277317, intron 1 of 6)",1053,"NM_001277317",66270,"Mm.25311","NM_025459","ENSMUSG00000022270","Fam134b","1810015C04Rik|AU015349","family with sequence similarity 134, member B","protein-coding"]
[3599,"chr17",46704479,46706576,"+",0,"NA","promoter-TSS (NM_009358)","promoter-TSS (NM_009358)",-525,"NM_009358",21770,"Mm.295009","NM_009358","ENSMUSG00000059409","Ppp2r5d","B'delta|TEG-271|Tex271","protein phosphatase 2, regulatory subunit B', delta","protein-coding"]
[34,"chr1",30948624,30951003,"+",0,"NA","promoter-TSS (NR_002688)","promoter-TSS (NR_002688)",-58,"NM_011200",19243,"Mm.491181","NM_011200","ENSMUSG00000026064","Ptp4a1","AA415290|AU019864|C130021B01|Prl-1","protein tyrosine phosphatase 4a1","protein-coding"]
[3056,"chr16",17508442,17509425,"+",0,"NA","promoter-TSS (NM_025808)","promoter-TSS (NM_025808)",-38,"NM_025808",66863,"Mm.161726","NM_025808","ENSMUSG00000022761","Lztr1","1200003E21Rik|AI591627|AW550890","leucine-zipper-like transcriptional regulator, 1","protein-coding"]
[1434,"chr11",96927996,96929860,"+",0,"NA","promoter-TSS (NM_146026)","promoter-TSS (NM_146026)",-396,"NM_146026",217138,"Mm.342551","NM_146026",null,"Prr15l","Atad4|BC022765|E230006A12Rik","proline rich 15-like","protein-coding"]
[3457,"chr17",32035920,32036920,"+",0,"NA","5' UTR (NM_028244, exon 1 of 16)","5' UTR (NM_028244, exon 1 of 16)",258,"NM_028244",72462,"Mm.102761","NM_028244","ENSMUSG00000058392","Rrp1b","2600005C20Rik|D030064A17|Kiaa0179|mKIAA0179","ribosomal RNA processing 1 homolog B (S. cerevisiae)","protein-coding"]
[8365,"chr9",44767024,44768448,"+",0,"NA","promoter-TSS (NM_145985)","promoter-TSS (NM_145985)",72,"NM_145985",213827,"Mm.371682","NM_145985","ENSMUSG00000032096","Arcn1","4632432M07Rik|nur17","archain 1","protein-coding"]
[368,"chr1",160078074,160080001,"+",0,"NA","TTS (NM_001162896)","TTS (NM_001162896)",-1052,"NR_038031",75255,"Mm.414845","NR_038030","ENSMUSG00000026729","4930562F07Rik","-","RIKEN cDNA 4930562F07 gene","ncRNA"]
[3078,"chr16",20424269,20426553,"+",0,"NA","intron (NM_176839, intron 1 of 6)","intron (NM_176839, intron 1 of 6)",983,"NM_013790",27416,"Mm.20845","NM_013790","ENSMUSG00000022822","Abcc5","2900011L11Rik|AI132311|Abcc5a|Abcc5b|Mrp5","ATP-binding cassette, sub-family C (CFTR/MRP), member 5","protein-coding"]
[611,"chr10",42501319,42503218,"+",0,"NA","5' UTR (NM_017472, exon 1 of 4)","5' UTR (NM_017472, exon 1 of 4)",214,"NM_017472",54198,"Mm.277870","NM_017472","ENSMUSG00000019804","Snx3","SDP3","sorting nexin 3","protein-coding"]
[492,"chr1",191181441,191187094,"+",0,"NA","promoter-TSS (NM_007498)","promoter-TSS (NM_007498)",-934,"NM_007498",11910,"Mm.2706","NM_007498","ENSMUSG00000026628","Atf3","LRG-21","activating transcription factor 3","protein-coding"]
[8032,"chr8",88198780,88200164,"+",0,"NA","intron (NM_001164498, intron 1 of 12)","CpG",259,"NM_001164498",214627,"Mm.491211","NM_001164497","ENSMUSG00000036779","Papd5","5730445M16Rik|5830428A09","PAP associated domain containing 5","protein-coding"]
[5384,"chr3",138738147,138747416,"+",0,"NA","intron (NR_121195, intron 1 of 7)","CpG",573,"NM_019571",56224,"Mm.31927","NM_019571","ENSMUSG00000028152","Tspan5","2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9","tetraspanin 5","protein-coding"]
[6090,"chr5",25099668,25101664,"+",0,"NA","promoter-TSS (NR_027851)","promoter-TSS (NR_027851)",-24,"NM_145401",108099,"Mm.33649","NM_145401","ENSMUSG00000028944","Prkag2","2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS","protein kinase, AMP-activated, gamma 2 non-catalytic subunit","protein-coding"]
[67,"chr1",39477337,39479974,"+",0,"NA","promoter-TSS (NM_018775)","promoter-TSS (NM_018775)",92,"NM_018775",54610,"Mm.387293","NM_018775","ENSMUSG00000003134","Tbc1d8","AD3|HBLP1|VRP","TBC1 domain family, member 8","protein-coding"]
[3335,"chr17",23726015,23726686,"+",0,"NA","promoter-TSS (NM_023058)","promoter-TSS (NM_023058)",14,"NM_023058",268930,"Mm.182193","NM_023058","ENSMUSG00000023908","Pkmyt1","6230424P17|AW209059|Myt1","protein kinase, membrane associated tyrosine/threonine 1","protein-coding"]
[8964,"chrX",159532705,159533026,"+",0,"NA","intron (NM_001033472, intron 1 of 11)","CpG",197,"NM_001033472",382252,"Mm.296254","NM_001033472","ENSMUSG00000044150","A830080D01Rik","2310067E24Rik|Gm1146","RIKEN cDNA A830080D01 gene","protein-coding"]
[3214,"chr16",75766340,75767985,"+",0,"NA","promoter-TSS (NR_027492)","promoter-TSS (NR_027492)",-344,"NM_030201",110920,"Mm.26704","NM_030201","ENSMUSG00000032932","Hspa13","1600002I10Rik|AV006182|B230217N24Rik|Stch","heat shock protein 70 family, member 13","protein-coding"]
[1603,"chr11",115276700,115277654,"+",0,"NA","promoter-TSS (NM_007997)","promoter-TSS (NM_007997)",-208,"NM_007997",14149,"Mm.4719","NM_007997","ENSMUSG00000018861","Fdxr","-","ferredoxin reductase","protein-coding"]
[5833,"chr4",132273542,132275031,"+",0,"NA","promoter-TSS (NM_025579)","promoter-TSS (NM_025579)",-89,"NM_025579",66464,"Mm.331926","NM_025579",null,"Taf12","20kDa|2810422D08Rik|AW557038|Taf2J","TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor","protein-coding"]
[1558,"chr11",106083666,106085333,"+",0,"NA","promoter-TSS (NM_011947)","promoter-TSS (NM_011947)",-403,"NM_011947",26406,"Mm.27041","NM_011947","ENSMUSG00000020700","Map3k3","AW548911|MAPKKK3|Mekk3|mKIAA4031","mitogen-activated protein kinase kinase kinase 3","protein-coding"]
[5239,"chr3",95738080,95740950,"+",0,"NA","promoter-TSS (NM_001252653)","promoter-TSS (NM_001252653)",54,"NM_007899",13601,"Mm.3433","NM_007899","ENSMUSG00000028108","Ecm1","AI663821|p85","extracellular matrix protein 1","protein-coding"]
[4881,"chr2",156196046,156197483,"+",0,"NA","5' UTR (NM_172674, exon 1 of 18)","5' UTR (NM_172674, exon 1 of 18)",117,"NM_172674",228829,"Mm.427078","NM_172674","ENSMUSG00000038116","Phf20","6820402O20Rik","PHD finger protein 20","protein-coding"]
[8117,"chr8",107031324,107032345,"+",0,"NA","intron (NM_126165, intron 1 of 10)","CpG",508,"NM_126165",116733,"Mm.236004","NM_126165","ENSMUSG00000031913","Vps4a","4930589C15Rik|AI325971|AW553189","vacuolar protein sorting 4a (yeast)","protein-coding"]
[4540,"chr2",69380509,69380751,"+",0,"NA","5' UTR (NM_175512, exon 1 of 5)","5' UTR (NM_175512, exon 1 of 5)",168,"NM_175512",241452,"Mm.211655","NM_175512",null,"Dhrs9","C730025I08Rik|Rdh15","dehydrogenase/reductase (SDR family) member 9","protein-coding"]
[1427,"chr11",96318241,96320962,"+",0,"NA","intron (NM_010459, intron 1 of 1)","intron (NM_010459, intron 1 of 1)",1334,"NM_010459",15412,"Mm.3546","NM_010459","ENSMUSG00000038692","Hoxb4","Hox-2.6","homeobox B4","protein-coding"]
[1017,"chr11",21090546,21092805,"+",0,"NA","5' UTR (NM_023324, exon 1 of 7)","5' UTR (NM_023324, exon 1 of 7)",351,"NM_023324",67245,"Mm.28957","NM_023324","ENSMUSG00000020134","Peli1","2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e","pellino 1","protein-coding"]
[5375,"chr3",137866996,137868440,"+",0,"NA","promoter-TSS (NM_001033155)","promoter-TSS (NM_001033155)",43,"NM_001033155",70604,"Mm.256488","NM_001033155","ENSMUSG00000074212","Dnajb14","5730496F10Rik","DnaJ (Hsp40) homolog, subfamily B, member 14","protein-coding"]
[162,"chr1",74123942,74125244,"+",0,"NA","promoter-TSS (NM_001170641)","promoter-TSS (NM_001170641)",-144,"NM_001289895",21961,"Mm.309975","NM_027884","ENSMUSG00000055322","Tns1","1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns","tensin 1","protein-coding"]
[6095,"chr5",28070584,28071870,"+",0,"NA","promoter-TSS (NM_153526)","promoter-TSS (NM_153526)",-185,"NM_153526",231070,"Mm.30221","NM_153526","ENSMUSG00000045294","Insig1","1810013C12Rik|Insig-1","insulin induced gene 1","protein-coding"]
[3461,"chr17",32320085,32322153,"+",0,"NA","TTS (NM_017476)","TTS (NM_017476)",119,"NM_019774",56399,"Mm.328945","NM_019774","ENSMUSG00000024045","Akap8","1200016A02Rik|AA673585|AKAP-8|AKAP95|AU015639","A kinase (PRKA) anchor protein 8","protein-coding"]
[4530,"chr2",60672920,60673610,"+",0,"NA","intron (NM_001159564, intron 4 of 17)","intron (NM_001159564, intron 4 of 17)",428,"NM_021359",16420,"Mm.98193","NM_021359","ENSMUSG00000026971","Itgb6","2210409C20Rik|4831415H04Rik","integrin beta 6","protein-coding"]
[5163,"chr3",89163869,89165440,"+",0,"NA","promoter-TSS (NM_001163432)","promoter-TSS (NM_001163432)",-141,"NM_001310016",105943584,null,"NM_001310016",null,"Clk2-scamp3","TU52","Clk2-scamp3 readthrough","protein-coding"]
[902,"chr10",127122417,127123552,"+",0,"NA","Intergenic","MTC|LTR|ERVL-MaLR",-1824,"NM_001171026",216440,"Mm.295246","NM_177614","ENSMUSG00000040462","Os9","4632413K17Rik|AU022351","amplified in osteosarcoma","protein-coding"]
[7770,"chr8",13907379,13908204,"+",0,"NA","promoter-TSS (NM_025785)","promoter-TSS (NM_025785)",-15,"NM_025785",66822,"Mm.37950","NM_025785","ENSMUSG00000038365","Fbxo25","9130015I06Rik|AI649137|Fbx25","F-box protein 25","protein-coding"]
[6979,"chr6",128424164,128425378,"+",0,"NA","exon (NM_133927, exon 1 of 12)","exon (NM_133927, exon 1 of 12)",139,"NM_133927",101142,"Mm.31345","NM_133927","ENSMUSG00000001518","Itfg2","2700050P07Rik|AI646725","integrin alpha FG-GAP repeat containing 2","protein-coding"]
[7911,"chr8",70508136,70510801,"+",0,"NA","intron (NM_019883, intron 2 of 3)","intron (NM_019883, intron 2 of 3)",899,"NM_019883",22186,"Mm.297372","NM_019883","ENSMUSG00000090137","Uba52","D8Ertd21e|Gm1863|Rps27a|Ubb|Ubc","ubiquitin A-52 residue ribosomal protein fusion product 1","protein-coding"]
[2378,"chr14",25841879,25842941,"+",0,"NA","intron (NM_013469, intron 1 of 14)","CpG",255,"NM_013469",11744,"Mm.294083","NM_013469","ENSMUSG00000021866","Anxa11","A830099O17Rik|Anx11","annexin A11","protein-coding"]
[2983,"chr16",3847279,3848124,"+",0,"NA","5' UTR (NM_001081217, exon 1 of 3)","5' UTR (NM_001081217, exon 1 of 3)",478,"NM_001081217",385674,"Mm.244261","NM_001081217","ENSMUSG00000054939","Zfp174","Gm1754","zinc finger protein 174","protein-coding"]
[668,"chr10",62601513,62603036,"+",0,"NA","promoter-TSS (NM_019553)","promoter-TSS (NM_019553)",24,"NM_019553",56200,"Mm.413275","NM_019553","ENSMUSG00000020075","Ddx21","AI255159|AL022742|D10Ertd645e|D10Wsu42e","DEAD (Asp-Glu-Ala-Asp) box polypeptide 21","protein-coding"]
[2701,"chr15",43282231,43283172,"+",0,"NA","promoter-TSS (NM_008388)","promoter-TSS (NM_008388)",35,"NM_008388",16341,"Mm.289992","NM_008388","ENSMUSG00000022336","Eif3e","48kDa|Eif3s6|Int6|eIF3-p46|eIF3-p48","eukaryotic translation initiation factor 3, subunit E","protein-coding"]
[8690,"chr9",110475459,110477342,"+",0,"NA","promoter-TSS (NM_010628)","promoter-TSS (NM_010628)",294,"NM_177771",270201,"Mm.41744","NM_177771","ENSMUSG00000054792","Klhl18","A930041K15|AW545966","kelch-like 18","protein-coding"]
[7341,"chr7",49778378,49778728,"+",0,"NA","intron (NM_133740, intron 1 of 15)","CpG",195,"NM_133740",71974,"Mm.33202","NM_133740","ENSMUSG00000030505","Prmt3","2010005E20Rik|2410018A17Rik|AL033309|Hrmt1l3","protein arginine N-methyltransferase 3","protein-coding"]
[6823,"chr6",85068448,85069536,"+",0,"NA","intron (NM_177077, intron 1 of 21)","intron (NM_177077, intron 1 of 21)",521,"NM_177077",75914,"Mm.159621","NM_177077","ENSMUSG00000033769","Exoc6b","4930569O18Rik|G430127E12Rik|Sec15b|Sec15l2|mKIAA0919","exocyst complex component 6B","protein-coding"]
[2558,"chr14",70172757,70181121,"+",0,"NA","promoter-TSS (NM_001253736)","promoter-TSS (NM_001253736)",-124,"NM_001253736",213019,"Mm.283968","NM_145978","ENSMUSG00000022090","Pdlim2","4732462F18Rik|Slim","PDZ and LIM domain 2","protein-coding"]
[1085,"chr11",50173997,50175328,"+",0,"NA","promoter-TSS (NM_026543)","promoter-TSS (NM_026543)",-189,"NM_026543",68067,"Mm.40828","NM_026543","ENSMUSG00000020381","3010026O09Rik","2900016G09Rik|AI851514|AW475975","RIKEN cDNA 3010026O09 gene","protein-coding"]
[1714,"chr12",4591684,4593845,"+",0,"NA","promoter-TSS (NM_001198968)","promoter-TSS (NM_001198968)",-244,"NM_001198969",20403,"Mm.341204","NM_011365","ENSMUSG00000020640","Itsn2","AI327390|Ese2|Sh3d1B|Sh3p18|mKIAA1256","intersectin 2","protein-coding"]
[1497,"chr11",100849788,100851067,"+",0,"NA","5' UTR (NM_001113563, exon 1 of 19)","5' UTR (NM_001113563, exon 1 of 19)",158,"NM_001113563",20851,"Mm.34064","NM_011489","ENSMUSG00000020919","Stat5b","-","signal transducer and activator of transcription 5B","protein-coding"]
[2579,"chr14",75283873,75284917,"+",0,"NA","promoter-TSS (NM_026083)","promoter-TSS (NM_026083)",22,"NM_026083",67302,"Mm.74704","NM_026083","ENSMUSG00000022000","Zc3h13","2600010B19Rik|3110050K21Rik|4930570G11Rik|C87618","zinc finger CCCH type containing 13","protein-coding"]
[7325,"chr7",45897137,45897666,"+",0,"NA","promoter-TSS (NM_021482)","promoter-TSS (NM_021482)",332,"NM_144801",70209,"Mm.163766","NM_144801","ENSMUSG00000002781","Tmem143","2310076O21Rik|AI481604","transmembrane protein 143","protein-coding"]
[955,"chr11",4031294,4032584,"+",0,"NA","intron (NM_146013, intron 1 of 11)","intron (NM_146013, intron 1 of 11)",157,"NM_146013",103655,"Mm.337476","NM_146013","ENSMUSG00000019368","Sec14l4","AI256582|AW536553|SPF|TAP","SEC14-like lipid binding 4","protein-coding"]
[3267,"chr16",95897369,95899038,"+",0,"NA","intron (NR_040485, intron 1 of 3)","intron (NR_040485, intron 1 of 3)",510,"NR_040485",69776,"Mm.120470","NR_040484","ENSMUSG00000086899","1600002D24Rik","-","RIKEN cDNA 1600002D24 gene","ncRNA"]
[1808,"chr12",69181886,69182581,"+",0,"NA","TTS (NM_025589)","TTS (NM_025589)",1834,"NM_025589",66483,"Mm.379115","NM_025589","ENSMUSG00000049751","Rpl36al","2410038A03Rik|RPL36A","ribosomal protein L36A-like","protein-coding"]
[601,"chr10",40882506,40884160,"+",0,"NA","promoter-TSS (NM_031877)","promoter-TSS (NM_031877)",-190,"NM_027879",71713,"Mm.46063","NM_027879","ENSMUSG00000038446","Cdc40","1200003H23Rik|EHB3|PRP17","cell division cycle 40","protein-coding"]
[822,"chr10",89744649,89746000,"+",0,"NA","intron (NM_029166, intron 1 of 20)","CpG",333,"NM_029166",75089,"Mm.268922","NM_029166","ENSMUSG00000019951","Uhrf1bp1l","2010319N22Rik|4930506D01Rik|AA589495|C80672|E030041M21Rik|mKIAA0701","UHRF1 (ICBP90) binding protein 1-like","protein-coding"]
[7190,"chr7",28311560,28312011,"+",0,"NA","intron (NM_025616, intron 1 of 10)","intron (NM_025616, intron 1 of 10)",261,"NM_025616",66525,"Mm.167913","NM_025616",null,"Timm50","2810403L02Rik|AU015082|TIM50L","translocase of inner mitochondrial membrane 50","protein-coding"]
[8212,"chr8",123477414,123478838,"+",0,"NA","intron (NM_054070, intron 1 of 16)","CpG",264,"NR_028260",114896,"Mm.287475","NM_054070","ENSMUSG00000031967","Afg3l1","1700047G05Rik|3110061K15Rik","AFG3-like AAA ATPase 1","protein-coding"]
[3873,"chr18",46311424,46311729,"+",0,"NA","intron (NM_001160399, intron 1 of 9)","intron (NM_001160399, intron 1 of 9)",352,"NM_001160399",240261,"Mm.329416","NM_001160399","ENSMUSG00000071855","Ccdc112","8430438M01Rik|AW108467","coiled-coil domain containing 112","protein-coding"]
[5751,"chr4",121097843,121098480,"+",0,"NA","promoter-TSS (NM_172700)","promoter-TSS (NM_172700)",82,"NM_172700",230709,"Mm.34399","NM_172700","ENSMUSG00000043207","Zmpste24","A530043O15Rik|D030046F19|FACE1|Face-1|MADB|STE24|Ste24p","zinc metallopeptidase, STE24","protein-coding"]
[3122,"chr16",31947818,31949396,"+",0,"NA","promoter-TSS (NR_027897)","promoter-TSS (NR_027897)",61,"NM_026554",68092,"Mm.290027","NM_026554","ENSMUSG00000022774","Ncbp2","20kDa|5930413E18Rik|AA536802|AI843301|C79367","nuclear cap binding protein subunit 2","protein-coding"]
[3994,"chr19",4125993,4128458,"+",0,"NA","intron (NM_001078649, intron 3 of 7)","intron (NM_001078649, intron 3 of 7)",1265,"NM_025889",66990,"Mm.276255","NM_025889",null,"Tmem134","2410001H17Rik|AI463452","transmembrane protein 134","protein-coding"]
[1516,"chr11",101448161,101449209,"+",0,"NA","intron (NM_027320, intron 1 of 6)","intron (NM_027320, intron 1 of 6)",273,"NM_027320",70110,"Mm.45558","NM_027320","ENSMUSG00000010358","Ifi35","2010008K16Rik|AW986054|IFP35|ifi-35","interferon-induced protein 35","protein-coding"]
[4775,"chr2",130839386,130840610,"+",0,"NA","promoter-TSS (NM_001311147)","promoter-TSS (NM_001311147)",147,"NM_029432",228602,"Mm.271990","NM_028367","ENSMUSG00000027309","4930402H24Rik","2810487F15Rik|AI413763|C78926","RIKEN cDNA 4930402H24 gene","protein-coding"]
[4904,"chr2",160645500,160647920,"+",0,"NA","intron (NM_009408, intron 2 of 20)","CpG-8783",813,"NM_009408",21969,"Mm.217233","NM_009408","ENSMUSG00000070544","Top1","AI467334|D130064I21Rik|Top-1","topoisomerase (DNA) I","protein-coding"]
[6332,"chr5",110779814,110781848,"+",0,"NA","promoter-TSS (NM_019700)","promoter-TSS (NM_019700)",-216,"NM_001025562",56361,"Mm.23528","NM_019700","ENSMUSG00000029507","Pus1","A730013B20Rik|MPUS1|mPus1p","pseudouridine synthase 1","protein-coding"]
[5431,"chr4",8535654,8536598,"+",0,"NA","intron (NM_021518, intron 1 of 7)","CpG",482,"NM_021518",59021,"Mm.397471","NM_021518","ENSMUSG00000047187","Rab2a","9330148M11Rik|C80220|Rab2","RAB2A, member RAS oncogene family","protein-coding"]
[4999,"chr2",181591455,181593232,"+",0,"NA","intron (NM_001164597, intron 1 of 16)","CpG",118,"NM_001164597",269401,"Mm.386888","NM_001164597","ENSMUSG00000000823","Zfp512b","Gm632|Znf512b","zinc finger protein 512B","protein-coding"]
[7737,"chr8",3630642,3631609,"+",0,"NA","promoter-TSS (NM_011503)","promoter-TSS (NM_011503)",-35,"NM_011503",20911,"Mm.7247","NM_011503","ENSMUSG00000004626","Stxbp2","C79054|Munc-18-2|Munc-18b|Munc18b|Sxtbp2|Sxtp2|Unc18-2|Unc18b|muSec1","syntaxin binding protein 2","protein-coding"]
[2248,"chr13",85288056,85290853,"+",0,"NA","promoter-TSS (NM_145452)","promoter-TSS (NM_145452)",32,"NM_145452",218397,"Mm.259653","NM_145452","ENSMUSG00000021549","Rasa1","Gap|RasGAP|Rasa","RAS p21 protein activator 1","protein-coding"]
[6130,"chr5",32853554,32855045,"+",0,"NA","promoter-TSS (NM_194340)","promoter-TSS (NM_194340)",-69,"NM_194340",215476,"Mm.248721","NM_194340","ENSMUSG00000054280","Prr14l","6030436E02Rik|C330019G07Rik|Prl14l","proline rich 14-like","protein-coding"]
[216,"chr1",88008020,88008548,"+",0,"NA","intron (NM_001033291, intron 1 of 27)","CpG",267,"NM_001198573",227334,"Mm.80484","NM_001033291","ENSMUSG00000005501","Usp40","B230215L03Rik|C730029K03","ubiquitin specific peptidase 40","protein-coding"]
[7660,"chr7",133122025,133124672,"+",0,"NA","5' UTR (NM_009980, exon 1 of 11)","5' UTR (NM_009980, exon 1 of 11)",135,"NM_009980",13017,"Mm.246240","NM_009980","ENSMUSG00000030970","Ctbp2","AA407280|D7Ertd45e|Gtrgeo6|Ribeye","C-terminal binding protein 2","protein-coding"]
[5326,"chr3",116006579,116008240,"+",0,"NA","promoter-TSS (NM_023214)","promoter-TSS (NM_023214)",-3,"NM_023214",66500,"Mm.34550","NM_023214","ENSMUSG00000054414","Slc30a7","1810059J10Rik|2610034N15Rik|4833428C12Rik|AI467242|ZnT-7|ZnT7|Zntl2","solute carrier family 30 (zinc transporter), member 7","protein-coding"]
[7135,"chr7",24207664,24208104,"+",0,"NA","intron (NM_019940, intron 1 of 3)","intron (NM_019940, intron 1 of 3)",265,"NM_019940",56707,"Mm.448367","NM_019940","ENSMUSG00000087598","Zfp111","-","zinc finger protein 111","protein-coding"]
[676,"chr10",63382464,63382713,"+",0,"NA","intron (NM_001253685, intron 1 of 4)","intron (NM_001253685, intron 1 of 4)",145,"NM_001253685",30045,"Mm.32550","NM_013888","ENSMUSG00000036764","Dnajc12","Jdp1|mJDP1","DnaJ (Hsp40) homolog, subfamily C, member 12","protein-coding"]
[2640,"chr15",5243456,5245175,"+",0,"NA","promoter-TSS (NM_008965)","promoter-TSS (NM_008965)",-128,"NM_008965",19219,"Mm.18509","NM_008965","ENSMUSG00000039942","Ptger4","EP4|Ptgerep4","prostaglandin E receptor 4 (subtype EP4)","protein-coding"]
[7034,"chr7",3501830,3502846,"+",0,"NA","intron (NM_177363, intron 1 of 5)","intron (NM_177363, intron 1 of 5)",214,"NM_177363",245126,"Mm.245747","NM_177363","ENSMUSG00000053338","Tarm1","9930022N03Rik|ENSMUSG00000053338|Gm9904|OLT-2","T cell-interacting, activating receptor on myeloid cells 1","protein-coding"]
[4312,"chr2",3512156,3513685,"+",0,"NA","promoter-TSS (NM_177647)","promoter-TSS (NM_177647)",-106,"NM_015765",50497,"Mm.89341","NM_015765","ENSMUSG00000051396","Hspa14","70kDa|HSP70L1|Hsp70-4|NST-1|hsr.1","heat shock protein 14","protein-coding"]
[1631,"chr11",116306338,116308146,"+",0,"NA","promoter-TSS (NM_001162872)","promoter-TSS (NM_001162872)",-504,"NM_001162872",53413,"Mm.22530","NM_016857","ENSMUSG00000020792","Exoc7","Exo70|sec70","exocyst complex component 7","protein-coding"]
[8026,"chr8",85840140,85841388,"+",0,"NA","promoter-TSS (NM_199446)","promoter-TSS (NM_199446)",185,"NM_028007",71927,"Mm.61018","NM_028007","ENSMUSG00000031703","Itfg1","2310047C21Rik|AI314457|Cda08|D8Wsu49e","integrin alpha FG-GAP repeat containing 1","protein-coding"]
[5278,"chr3",103126738,103131066,"+",0,"NA","intron (NM_177857, intron 1 of 18)","intron (NM_177857, intron 1 of 18)",1346,"NM_177857",329727,"Mm.293641","NM_177857","ENSMUSG00000007379","Dennd2c","A930010I20Rik","DENN/MADD domain containing 2C","protein-coding"]
[5803,"chr4",129225592,129226834,"+",0,"NA","intron (NM_001285867, intron 1 of 6)","intron (NM_001285867, intron 1 of 6)",1698,"NM_001285866",97130,"Mm.331907","NM_001033189","ENSMUSG00000050390","C77080","Kiaa1522|mKIAA1522","expressed sequence C77080","protein-coding"]
[2755,"chr15",74954715,74956767,"+",0,"NA","intron (NM_001164039, intron 2 of 4)","CpG",635,"NM_001164040",17069,"Mm.788","NM_008529","ENSMUSG00000022587","Ly6e","Ly67|RIG-E|Sca-2|TSA-1|Tsa1","lymphocyte antigen 6 complex, locus E","protein-coding"]
[4678,"chr2",118598392,118598591,"+",0,"NA","intron (NM_009773, intron 1 of 22)","CpG",280,"NM_009773",12236,"Mm.29133","NM_009773","ENSMUSG00000040084","Bub1b","AU045529|BUBR1","budding uninhibited by benzimidazoles 1 homolog, beta (S. cerevisiae)","protein-coding"]
[3164,"chr16",42874650,42875359,"+",0,"NA","intron (NR_040522, intron 1 of 1)","CpG",583,"NR_040521",75722,"Mm.243747","NR_040521","ENSMUSG00000075070","4932412D23Rik","ENSMUSG00000075070|Gm10809","RIKEN cDNA 4932412D23 gene","ncRNA"]
[5575,"chr4",59805669,59806182,"+",0,"NA","5' UTR (NM_172468, exon 1 of 9)","5' UTR (NM_172468, exon 1 of 9)",275,"NM_172468",209131,"Mm.259705","NM_172468","ENSMUSG00000028385","Snx30","4732481H14Rik|C030041J06Rik","sorting nexin family member 30","protein-coding"]
[1461,"chr11",98357680,98359405,"+",0,"NA","promoter-TSS (NR_045477)","promoter-TSS (NR_045477)",174,"NM_021547",59045,"Mm.265546","NM_021547","ENSMUSG00000018167","Stard3","Mln64|es64","START domain containing 3","protein-coding"]
[7322,"chr7",45830278,45831182,"+",0,"NA","promoter-TSS (NM_153419)","promoter-TSS (NM_153419)",59,"NM_153419",101612,"Mm.274847","NM_153419","ENSMUSG00000053801","Grwd1","A301|AI504353|Grwd|Wdr28","glutamate-rich WD repeat containing 1","protein-coding"]
[3666,"chr17",64331303,64331780,"+",0,"NA","intron (NM_144859, intron 1 of 8)","CpG",342,"NM_144859",224938,"Mm.489681","NM_144859","ENSMUSG00000024083","Pja2","AI447901|AL022700|Neurodap1|mKIAA0438","praja 2, RING-H2 motif containing","protein-coding"]
[1801,"chr12",59128174,59132072,"+",0,"NA","intron (NM_001165254, intron 1 of 22)","intron (NM_001165254, intron 1 of 22)",377,"NM_001165254",217615,"Mm.244118","NM_146034","ENSMUSG00000021000","Ctage5","D12Bwg0579e|Mea6|Mgea|Mgea6","CTAGE family, member 5","protein-coding"]
[6862,"chr6",91683702,91686903,"+",0,"NA","intron (NM_009320, intron 1 of 14)","intron (NM_009320, intron 1 of 14)",1235,"NM_009320",21366,"Mm.395650","NM_009320","ENSMUSG00000030096","Slc6a6","AA589629|C80501|Taut","solute carrier family 6 (neurotransmitter transporter, taurine), member 6","protein-coding"]
[5499,"chr4",41123326,41124974,"+",0,"NA","intron (NM_139236, intron 1 of 25)","intron (NM_139236, intron 1 of 25)",189,"NM_139236",230082,"Mm.285797","NM_139236","ENSMUSG00000028430","Nol6","AA410091|Nrap","nucleolar protein family 6 (RNA-associated)","protein-coding"]
[7862,"chr8",57486459,57489117,"+",0,"NA","promoter-TSS (NR_126555)","promoter-TSS (NR_126555)",72,"NM_021788",60406,"Mm.118","NM_021788","ENSMUSG00000031609","Sap30","30kDa","sin3 associated polypeptide","protein-coding"]
[1630,"chr11",116273736,116274491,"+",0,"NA","5' UTR (NM_146032, exon 1 of 16)","5' UTR (NM_146032, exon 1 of 16)",104,"NM_146032",217337,"Mm.29655","NM_146032","ENSMUSG00000020780","Srp68","2610024I03Rik","signal recognition particle 68","protein-coding"]
[5060,"chr3",40846200,40846486,"+",0,"NA","promoter-TSS (NR_038067)","promoter-TSS (NR_038067)",511,"NM_028140",72175,"Mm.130610","NM_028140","ENSMUSG00000025759","Mfsd8","2810423E13Rik|AI836898|AV142426|Cln7","major facilitator superfamily domain containing 8","protein-coding"]
[6541,"chr5",139196625,139202800,"+",0,"NA","promoter-TSS (NM_001256117)","promoter-TSS (NM_001256117)",-925,"NM_001256115",77053,"Mm.210845","NM_024451","ENSMUSG00000036817","Sun1","4632417G13Rik|5730434D03Rik|Unc84a|mKIAA0810","Sad1 and UNC84 domain containing 1","protein-coding"]
[1546,"chr11",103697123,103698692,"+",0,"NA","promoter-TSS (NM_019650)","promoter-TSS (NM_019650)",183,"NR_102396",399609,"Mm.351922","NR_102388",null,"C130046K22Rik","-","RIKEN cDNA C130046K22 gene","ncRNA"]
[311,"chr1",134405543,134406379,"+",0,"NA","promoter-TSS (NM_028057)","promoter-TSS (NM_028057)",-29,"NM_028057",72017,"Mm.280230","NM_028057","ENSMUSG00000026456","Cyb5r1","1500005G05Rik|B5R.1|C80155|Nqo3a2","cytochrome b5 reductase 1","protein-coding"]
[917,"chr10",128058087,128060243,"+",0,"NA","5' UTR (NM_019766, exon 1 of 8)","5' UTR (NM_019766, exon 1 of 8)",183,"NM_019766",56351,"Mm.305816","NM_019766","ENSMUSG00000071072","Ptges3","5730442A20Rik|Ptges|Tebp|cPGES|p23|sid3177","prostaglandin E synthase 3 (cytosolic)","protein-coding"]
[4977,"chr2",180040954,180043000,"+",0,"NA","promoter-TSS (NM_178750)","promoter-TSS (NM_178750)",487,"NM_001289476",26444,"Mm.21728","NM_011969","ENSMUSG00000027566","Psma7","C6-I","proteasome (prosome, macropain) subunit, alpha type 7","protein-coding"]
[8048,"chr8",94136575,94141063,"+",0,"NA","exon (NM_008631, exon 3 of 3)","exon (NM_008631, exon 3 of 3)",1615,"NM_008631",17752,"Mm.1536","NM_008631","ENSMUSG00000031757","Mt4","MT-IV","metallothionein 4","protein-coding"]
[1816,"chr12",69474332,69475839,"+",0,"NA","intron (NR_038060, intron 1 of 4)","intron (NR_038060, intron 1 of 4)",465,"NR_038060",76062,"Mm.380755","NR_038060",null,"5830428M24Rik","100040862|Gm3007","RIKEN cDNA 5830428M24 gene","ncRNA"]
[5067,"chr3",51276446,51278123,"+",0,"NA","non-coding (NR_073429, exon 1 of 1)","non-coding (NR_073429, exon 1 of 1)",230,"NM_001291062",69257,"Mm.131038","NM_023502","ENSMUSG00000037174","Elf2","2610036A20Rik|A230104O07Rik|AW111824|BB183398|EU32|NERF|NERF-1A|NERF-1B|NERF-2","E74-like factor 2","protein-coding"]
[3824,"chr18",34505973,34508973,"+",0,"NA","promoter-TSS (NM_146084)","promoter-TSS (NM_146084)",-650,"NM_146084",225358,"Mm.226899","NM_146084","ENSMUSG00000036501","Fam13b","2610024E20Rik|AW060714|AW546153","family with sequence similarity 13, member B","protein-coding"]
[2274,"chr13",96924921,96925286,"+",0,"NA","intron (NM_001166065, intron 1 of 2)","CpG",414,"NM_001166065",218476,"Mm.483490","NM_001166065","ENSMUSG00000091387","Gcnt4","C2gnt3|Gm279|Gm73","glucosaminyl (N-acetyl) transferase 4, core 2 (beta-1,6-N-acetylglucosaminyltransferase)","protein-coding"]
[5938,"chr4",141147446,141148914,"+",0,"NA","intron (NM_172518, intron 1 of 9)","CpG",258,"NM_172518",213499,"Mm.28865","NM_172518","ENSMUSG00000028920","Fbxo42","6720460I06Rik|mKIAA1332","F-box protein 42","protein-coding"]
[2088,"chr13",38527735,38528777,"+",0,"NA","promoter-TSS (NM_001289599)","promoter-TSS (NM_001289599)",228,"NM_145367",105245,"Mm.28622","NM_145367","ENSMUSG00000038991","Txndc5","AL022641|ERp46|PC-TRP","thioredoxin domain containing 5","protein-coding"]
[2134,"chr13",51644740,51646265,"+",0,"NA","intron (NM_025415, intron 1 of 2)","CpG",270,"NM_025415",66197,"Mm.222228","NM_025415","ENSMUSG00000062248","Cks2","1110038L14Rik|CKSHS2","CDC28 protein kinase regulatory subunit 2","protein-coding"]
[5309,"chr3",108282766,108284452,"+",0,"NA","promoter-TSS (NM_001271599)","promoter-TSS (NM_001271599)",-455,"NM_001271599",20661,"Mm.157119","NM_019972","ENSMUSG00000068747","Sort1","2900053A11Rik|AI852375|Ntr3|Ntsr3","sortilin 1","protein-coding"]
[2045,"chr13",23584491,23586752,"+",0,"NA","TTS (NM_001290530)","TTS (NM_001290530)",349,"NM_001290530",319179,"Mm.440391","NM_178194","ENSMUSG00000047246","Hist1h2be","-","histone cluster 1, H2be","protein-coding"]
[8735,"chr9",122293556,122295031,"+",0,"NA","intron (NM_133979, intron 1 of 12)","CpG",130,"NM_001271873",102566,"Mm.87676","NM_133979","ENSMUSG00000037949","Ano10","AI604832|Tmem16k","anoctamin 10","protein-coding"]
[1887,"chr12",83920957,83922500,"+",0,"NA","intron (NR_073563, intron 1 of 10)","CpG",206,"NR_073563",18222,"Mm.4390","NM_010949","ENSMUSG00000021224","Numb","Nb","numb gene homolog (Drosophila)","protein-coding"]
[2705,"chr15",44748077,44748918,"+",0,"NA","5' UTR (NM_001285840, exon 1 of 7)","5' UTR (NM_001285840, exon 1 of 7)",175,"NM_001285840",319613,"Mm.207715","NM_176998","ENSMUSG00000022340","Sybu","Golsyn","syntabulin (syntaxin-interacting)","protein-coding"]
[690,"chr10",71237484,71238508,"+",0,"NA","promoter-TSS (NM_009360)","promoter-TSS (NM_009360)",48,"NM_009360",21780,"Mm.229292","NM_009360","ENSMUSG00000003923","Tfam","AI661103|Hmgts|mtTFA|tsHMG","transcription factor A, mitochondrial","protein-coding"]
[4475,"chr2",33215644,33217162,"+",0,"NA","5' UTR (NM_011923, exon 1 of 5)","5' UTR (NM_011923, exon 1 of 5)",442,"NM_011923",26360,"Mm.208919","NM_011923","ENSMUSG00000004105","Angptl2","AI593246|AW260363|Arp2","angiopoietin-like 2","protein-coding"]
[5780,"chr4",126319902,126321982,"+",0,"NA","intron (NM_133883, intron 1 of 5)","intron (NM_133883, intron 1 of 5)",761,"NM_133883",100206,"Mm.11285","NM_133883","ENSMUSG00000042558","Adprhl2","AI836109|Arh3","ADP-ribosylhydrolase like 2","protein-coding"]
[3627,"chr17",53689495,53690245,"+",0,"NA","promoter-TSS (NM_028232)","promoter-TSS (NM_028232)",-555,"NM_028232",72415,"Mm.153202","NM_028232","ENSMUSG00000023940","Sgol1","3300001M08Rik|C81037|Sgo1","shugoshin-like 1 (S. pombe)","protein-coding"]
[8008,"chr8",84908156,84911122,"+",0,"NA","exon (NM_010062, exon 4 of 6)","exon (NM_010062, exon 4 of 6)",1015,"NM_010062",13423,"Mm.350831","NM_010062","ENSMUSG00000003812","Dnase2a","Dnase2","deoxyribonuclease II alpha","protein-coding"]
[5443,"chr4",11383581,11389722,"+",0,"NA","5' UTR (NM_001290383, exon 1 of 16)","5' UTR (NM_001290383, exon 1 of 16)",132,"NM_001290383",207920,"Mm.387719","NM_194055","ENSMUSG00000040728","Esrp1","2210008M09Rik|A630065D16|BC031468|Rbm35a","epithelial splicing regulatory protein 1","protein-coding"]
[2710,"chr15",52712460,52713042,"+",0,"NA","intron (NM_027212, intron 1 of 3)","CpG",306,"NM_027212",69790,"Mm.195562","NM_027212","ENSMUSG00000038622","Med30","1810038N03Rik|2510044J04Rik|TRAP25|Thrap6","mediator complex subunit 30","protein-coding"]
[5324,"chr3",113629883,113631006,"+",0,"NA","promoter-TSS (NM_001038696)","promoter-TSS (NM_001038696)",-295,"NM_001038696",67225,"Mm.316928","NM_026043","ENSMUSG00000027981","Rnpc3","2810441O16Rik|AI447568|C030014B17Rik","RNA-binding region (RNP1, RRM) containing 3","protein-coding"]
[3218,"chr16",78301134,78304905,"+",0,"NA","intron (NM_001025192, intron 1 of 6)","intron (NM_001025192, intron 1 of 6)",1348,"NM_001276263",13052,"Mm.66222","NM_009988","ENSMUSG00000022865","Cxadr","2610206D03Rik|AU016810|AW553441|CAR|MCAR|MCVADR","coxsackie virus and adenovirus receptor","protein-coding"]
[3157,"chr16",38017846,38018591,"+",0,"NA","intron (NR_040565, intron 1 of 3)","intron (NR_040565, intron 1 of 3)",895,"NR_040565",75175,"Mm.399335","NR_040565",null,"4930542C21Rik","-","RIKEN cDNA 4930542C21 gene","ncRNA"]
[2727,"chr15",58415216,58416293,"+",0,"NA","exon (NM_145959, exon 1 of 24)","exon (NM_145959, exon 1 of 24)",286,"NM_145959",210998,"Mm.3224","NM_145959","ENSMUSG00000037119","D15Ertd621e","AV220772|BC033609|Fam91a1|SKIN|mKIAA0493","DNA segment, Chr 15, ERATO Doi 621, expressed","protein-coding"]
[4567,"chr2",75830496,75832954,"+",0,"NA","promoter-TSS (NM_172666)","promoter-TSS (NM_172666)",-452,"NM_172666",228061,"Mm.31227","NM_172666","ENSMUSG00000042410","Agps","5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2","alkylglycerone phosphate synthase","protein-coding"]
[4328,"chr2",10079838,10081036,"+",0,"NA","promoter-TSS (NM_025280)","promoter-TSS (NM_025280)",73,"NM_020615",11949,"Mm.12677","NM_020615","ENSMUSG00000025781","Atp5c1","1700094F02Rik","ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1","protein-coding"]
[6097,"chr5",29195127,29196317,"+",0,"NA","promoter-TSS (NR_110371)","promoter-TSS (NR_110371)",-271,"NM_001289757",56874,"Mm.87352","NM_021470","ENSMUSG00000029130","Rnf32","1700009J01Rik|2700025B22Rik|4930542N22Rik|Lmbr2","ring finger protein 32","protein-coding"]
[2910,"chr15",96697296,96701193,"+",0,"NA","intron (NM_175121, intron 1 of 15)","CpG",454,"NM_175121",67760,"Mm.46754","NM_175121","ENSMUSG00000022462","Slc38a2","5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382","solute carrier family 38, member 2","protein-coding"]
[927,"chr10",128334022,128339748,"+",0,"NA","promoter-TSS (NM_026444)","promoter-TSS (NM_026444)",-947,"NM_026444",12974,"Mm.58836","NM_026444","ENSMUSG00000005683","Cs","2610511A05Rik|9030605P22Rik|Ahl4|BB234005|Cis","citrate synthase","protein-coding"]
[3180,"chr16",48992839,48994442,"+",0,"NA","promoter-TSS (NM_172616)","promoter-TSS (NM_172616)",472,"NM_001110017",224170,"Mm.275138","NM_027341","ENSMUSG00000064061","Dzip3","2310047C04Rik|2A-HUB|6430549P11Rik|A230104G20","DAZ interacting protein 3, zinc finger","protein-coding"]
[8683,"chr9",109875601,109876365,"+",0,"NA","5' UTR (NM_007658, exon 1 of 15)","5' UTR (NM_007658, exon 1 of 15)",404,"NM_007658",12530,"Mm.307103","NM_007658","ENSMUSG00000032477","Cdc25a","D9Ertd393e","cell division cycle 25A","protein-coding"]
[844,"chr10",99261198,99265065,"+",0,"NA","promoter-TSS (NM_026268)","promoter-TSS (NM_026268)",-100,"NM_026268",67603,"Mm.1791","NM_026268","ENSMUSG00000019960","Dusp6","1300019I03Rik|MKP-3|MKP3|PYST1","dual specificity phosphatase 6","protein-coding"]
[5767,"chr4",124800873,124803256,"+",0,"NA","promoter-TSS (NM_008636)","promoter-TSS (NM_008636)",-485,"NM_008636",17764,"Mm.272397","NM_008636","ENSMUSG00000028890","Mtf1","MTF-1|Thyls","metal response element binding transcription factor 1","protein-coding"]
[272,"chr1",119525449,119526727,"+",0,"NA","promoter-TSS (NM_146103)","promoter-TSS (NM_146103)",-66,"NM_146103",226351,"Mm.439806","NM_146103","ENSMUSG00000098923","Tmem185b","2500001K11Rik","transmembrane protein 185B","protein-coding"]
[2376,"chr14",25586464,25590916,"+",0,"NA","non-coding (NR_033492, exon 1 of 1)","non-coding (NR_033492, exon 1 of 1)",1886,"NR_033492",77592,"Mm.444871","NM_175264",null,"4931406H21Rik","-","RIKEN cDNA 4931406H21 gene","ncRNA"]
[5263,"chr3",97900717,97901817,"+",0,"NA","promoter-TSS (NM_011342)","promoter-TSS (NM_011342)",40,"NM_011342",20333,"Mm.2551","NM_011342",null,"Sec22b","4930564D15Rik|AA517334|AI480645|C81333|ERS-24|Sec22l1","SEC22 homolog B, vesicle trafficking protein","protein-coding"]
[3787,"chr18",20895634,20897525,"+",0,"NA","promoter-TSS (NM_029491)","promoter-TSS (NM_029491)",-501,"NM_029491",75964,"Mm.273769","NM_029491","ENSMUSG00000033382","Trappc8","5033403J15Rik|AI845423|D030074E01Rik|Trs85|mKIAA1012","trafficking protein particle complex 8","protein-coding"]
[6145,"chr5",34512987,34514661,"+",0,"NA","exon (NM_139064, exon 1 of 6)","exon (NM_139064, exon 1 of 6)",155,"NM_139064",231130,"Mm.28615","NM_139064","ENSMUSG00000059866","Tnip2","1810020H16Rik|ABIN-2|AI428870","TNFAIP3 interacting protein 2","protein-coding"]
[3369,"chr17",24885878,24887848,"+",0,"NA","promoter-TSS (NM_027141)","promoter-TSS (NM_027141)",189,"NM_001163751",79043,"Mm.274794","NM_027141","ENSMUSG00000024160","Spsb3","2310012N15Rik|3300001M01Rik|SSB3|Tce1|mKIAA4204","splA/ryanodine receptor domain and SOCS box containing 3","protein-coding"]
[6044,"chr4",156234320,156236498,"+",0,"NA","promoter-TSS (NM_021303)","promoter-TSS (NM_021303)",-552,"NM_198305",231003,"Mm.423038","NM_198305","ENSMUSG00000078484","Klhl17","AL022703|BC058738","kelch-like 17","protein-coding"]
[8028,"chr8",86742396,86746558,"+",0,"NA","intron (NM_009172, intron 1 of 1)","intron (NM_009172, intron 1 of 1)",-1222,"NR_027829",666945,"Mm.391806","NR_027829",null,"Gm10638","ENSMUSG00000074178","predicted gene 10638","ncRNA"]
[606,"chr10",41518410,41520905,"+",0,"NA","exon (NM_016898, exon 1 of 6)","exon (NM_016898, exon 1 of 6)",157,"NM_016898",53599,"Mm.269815","NM_016898","ENSMUSG00000019818","Cd164","A115|A24|AA589639|AW540279|MGC-24|MSSP","CD164 antigen","protein-coding"]
[432,"chr1",172521839,172523060,"+",0,"NA","intron (NM_027972, intron 1 of 11)","intron (NM_027972, intron 1 of 11)",1319,"NM_027972",71870,"Mm.78373","NM_027972","ENSMUSG00000026546","Cfap45","1700028D05Rik|Ccdc19|Nesg1","cilia and flagella associated protein 45","protein-coding"]
[5713,"chr4",117132414,117134418,"+",0,"NA","exon (NM_001313916, exon 2 of 15)","exon (NM_001313916, exon 2 of 15)",547,"NM_013807",12795,"Mm.259022","NM_013807","ENSMUSG00000028680","Plk3","Cnk|Fnk|PLK-3|PRK","polo-like kinase 3","protein-coding"]
[2415,"chr14",34500880,34505692,"+",0,"NA","promoter-TSS (NM_009758)","promoter-TSS (NM_009758)",-740,"NM_009758",12166,"Mm.237825","NM_009758","ENSMUSG00000021796","Bmpr1a","1110037I22Rik|ALK3|AU045487|BMPR-IA|Bmpr","bone morphogenetic protein receptor, type 1A","protein-coding"]
[1656,"chr11",119020726,119024904,"+",0,"NA","promoter-TSS (NM_007623)","promoter-TSS (NM_007623)",-206,"NM_007623",12416,"Mm.14547","NM_007623","ENSMUSG00000025577","Cbx2","M33|MOD2|pc","chromobox 2","protein-coding"]
[191,"chr1",79761159,79761726,"+",0,"NA","intron (NM_001111279, intron 1 of 11)","CpG",327,"NM_001111279",69368,"Mm.293273","NM_027057","ENSMUSG00000073643","Wdfy1","1700013B03Rik|1700120F24Rik|FENS-1|Jr1|WDF1|ZFYVE17|mKIAA1435","WD repeat and FYVE domain containing 1","protein-coding"]
[262,"chr1",107509899,107516284,"+",0,"NA","intron (NM_011111, intron 1 of 7)","intron (NM_011111, intron 1 of 7)",1581,"NM_011111",18788,"Mm.271870","NM_011111","ENSMUSG00000062345","Serpinb2","PAI-2|Planh2|ovalbumin","serine (or cysteine) peptidase inhibitor, clade B, member 2","protein-coding"]
[1944,"chr12",102876243,102878861,"+",0,"NA","intron (NM_172806, intron 1 of 11)","CpG",854,"NM_172806",238386,"Mm.63456","NM_172806","ENSMUSG00000041702","Btbd7","5730507E09Rik|8030448M07|E130118E17Rik|FUP1|mKIAA1525","BTB (POZ) domain containing 7","protein-coding"]
[6109,"chr5",30869674,30870268,"+",0,"NA","intron (NM_144525, intron 1 of 16)","CpG",324,"NM_144525",68796,"Mm.205169","NM_144525",null,"Tmem214","1110039B18Rik|4921530J21Rik|AI841294|AU018742|C76280","transmembrane protein 214","protein-coding"]
[1921,"chr12",98734104,98735323,"+",0,"NA","promoter-TSS (NM_011877)","promoter-TSS (NM_011877)",-68,"NM_011877",24000,"Mm.4420","NM_011877","ENSMUSG00000021009","Ptpn21","PTPD1|PTPRL10","protein tyrosine phosphatase, non-receptor type 21","protein-coding"]
[8267,"chr9",20492408,20493381,"+",0,"NA","promoter-TSS (NM_001310742)","promoter-TSS (NM_001310742)",-148,"NM_001110309",235028,"Mm.297660","NM_146221","ENSMUSG00000059475","Zfp426","2900057C04Rik|KRAB1|Zfo61|Zfp68-rs1|Znf426|mKIAA4237","zinc finger protein 426","protein-coding"]
[7409,"chr7",81694129,81694337,"+",0,"NA","intron (NM_011983, intron 1 of 8)","intron (NM_011983, intron 1 of 8)",-1268,"NM_001164087",26557,"Mm.228","NM_011983","ENSMUSG00000025813","Homer2","9330120H11Rik|AW539445|CPD|Vesl-2","homer homolog 2 (Drosophila)","protein-coding"]
[1229,"chr11",69856493,69859394,"+",0,"NA","intron (NM_031880, intron 2 of 13)","intron (NM_031880, intron 2 of 13)",787,"NM_031880",83813,"Mm.28874","NM_031880","ENSMUSG00000001583","Tnk1","Kos1|Tnk1a|Tnk1b","tyrosine kinase, non-receptor, 1","protein-coding"]
[2614,"chr14",105620685,105623209,"+",0,"NA","Intergenic","Intergenic",1823,"NR_105814",102465207,null,"NR_105814","ENSMUSG00000098780","Mir6390","Gm27562|mmu-mir-6390","microRNA 6390","ncRNA"]
[4491,"chr2",35396897,35398356,"+",0,"NA","promoter-TSS (NM_001272040)","promoter-TSS (NM_001272040)",-452,"NM_001272040",74854,"Mm.159338","NM_001080709","ENSMUSG00000079421","4930402F06Rik","-","RIKEN cDNA 4930402F06 gene","protein-coding"]
[8190,"chr8",121651891,121653497,"+",0,"NA","promoter-TSS (NM_080855)","promoter-TSS (NM_080855)",-761,"NM_080855",142682,"Mm.103202","NM_080855","ENSMUSG00000061410","Zcchc14","AA792890|BDG29","zinc finger, CCHC domain containing 14","protein-coding"]
[3170,"chr16",44172379,44173831,"+",0,"NA","promoter-TSS (NM_001029889)","promoter-TSS (NM_001029889)",-292,"NM_001029889",207806,"Mm.310566","NM_001029889","ENSMUSG00000068284","Gm608","5530400K22Rik|Gm1779|mKIAA2018","predicted gene 608","protein-coding"]
[3135,"chr16",32913812,32914861,"+",0,"NA","exon (NM_001081255, exon 1 of 21)","exon (NM_001081255, exon 1 of 21)",236,"NM_001310672",70144,"Mm.491178","NM_001081255","ENSMUSG00000022801","Lrch3","2210409B11Rik|AW215594|Gm1742","leucine-rich repeats and calponin homology (CH) domain containing 3","protein-coding"]
[7054,"chr7",4914241,4916191,"+",0,"NA","promoter-TSS (NM_170759)","promoter-TSS (NM_170759)",-1,"NM_170759",232816,"Mm.27442","NM_170759","ENSMUSG00000074406","Zfp628","Zec|Znf628","zinc finger protein 628","protein-coding"]
[7041,"chr7",4163307,4165281,"+",0,"NA","intron (NM_021454, intron 1 of 2)","intron (NM_021454, intron 1 of 2)",405,"NM_021454",58804,"Mm.34268","NM_021454","ENSMUSG00000063838","Cdc42ep5","1700027J19Rik|2010007O02Rik|Borg3|C85526|CEP5","CDC42 effector protein (Rho GTPase binding) 5","protein-coding"]
[6017,"chr4",155490696,155493596,"+",0,"NA","intron (NM_001160017, intron 1 of 10)","CpG",785,"NM_001160016",14688,"Mm.2344","NM_008142","ENSMUSG00000029064","Gnb1","AA409223|C77571|Gnb-1","guanine nucleotide binding protein (G protein), beta 1","protein-coding"]
[3372,"chr17",24959747,24961656,"+",0,"NA","promoter-TSS (NM_198937)","promoter-TSS (NM_198937)",-78,"NM_198937",52009,"Mm.371601","NM_198937","ENSMUSG00000024165","Hn1l","2810430B18Rik|AL022629|C16orf34|D17Ertd441e","hematological and neurological expressed 1-like","protein-coding"]
[8724,"chr9",120570954,120572644,"+",0,"NA","intron (NM_025974, intron 1 of 5)","intron (NM_025974, intron 1 of 5)",282,"NM_025974",67115,"Mm.289810","NM_025974","ENSMUSG00000025794","Rpl14","3100001N19Rik|AA407502|AL022816|CAG-ISL-7|CTG-B33|L14","ribosomal protein L14","protein-coding"]
[6592,"chr5",145201146,145201894,"+",0,"NA","exon (NM_023322, exon 1 of 3)","exon (NM_023322, exon 1 of 3)",362,"NM_023322",67235,"Mm.432480","NM_023322","ENSMUSG00000029627","Zkscan14","2310046C23Rik|2810437E14Rik|Zfp99|Znf394","zinc finger with KRAB and SCAN domains 14","protein-coding"]
[2626,"chr14",121377402,121380191,"+",0,"NA","intron (NM_145465, intron 1 of 10)","CpG",434,"NM_145465",223255,"Mm.390756","NM_145465","ENSMUSG00000063410","Stk24","1810013H02Rik|C76483|MST-3|Mst3|STE20","serine/threonine kinase 24","protein-coding"]
[7361,"chr7",66688657,66690419,"+",0,"NA","promoter-TSS (NM_080443)","promoter-TSS (NM_080443)",23,"NM_080443",117589,"Mm.34785","NM_080443","ENSMUSG00000030509","Asb7","AI449039|Asb-7|D030055C23Rik","ankyrin repeat and SOCS box-containing 7","protein-coding"]
[7352,"chr7",64373502,64374029,"+",0,"NA","intron (NM_177893, intron 1 of 13)","intron (NM_177893, intron 1 of 13)",330,"NM_177893",330554,"Mm.236510","NM_177893","ENSMUSG00000033458","Fan1","6030441H18Rik|Mtmr15|mFAN1","FANCD2/FANCI-associated nuclease 1","protein-coding"]
[1557,"chr11",106065655,106066690,"+",0,"NA","promoter-TSS (NM_027346)","promoter-TSS (NM_027346)",65,"NM_027346",70207,"Mm.343857","NM_027346","ENSMUSG00000001983","Taco1","2310066I18Rik|Ccdc44","translational activator of mitochondrially encoded cytochrome c oxidase I","protein-coding"]
[6874,"chr6",97204398,97205532,"+",0,"NA","intron (NM_001111106, intron 1 of 16)","intron (NM_001111106, intron 1 of 16)",682,"NM_001301858",22200,"Mm.277626","NM_011666","ENSMUSG00000030061","Uba3","A830034N06Rik|AI256736|AI848246|AW546539|Ube1c","ubiquitin-like modifier activating enzyme 3","protein-coding"]
[6883,"chr6",106799596,106800010,"+",0,"NA","intron (NM_175357, intron 1 of 10)","intron (NM_175357, intron 1 of 10)",284,"NM_021449",58799,"Mm.290085","NM_021449",null,"Crbn","2610203G15Rik|2900045O07Rik|AF229032|AW108261|piL","cereblon","protein-coding"]
[3428,"chr17",28485201,28485963,"+",0,"NA","intron (NM_010220, intron 1 of 10)","CpG",567,"NM_010220",14229,"Mm.276405","NM_010220","ENSMUSG00000024222","Fkbp5","D17Ertd592e|Dit1|FKBP-5|FKBP51","FK506 binding protein 5","protein-coding"]
[6889,"chr6",113045553,113047394,"+",0,"NA","intron (NM_008188, intron 1 of 9)","CpG",146,"NM_008188",14911,"Mm.781","NM_008188","ENSMUSG00000030264","Thumpd3","AW556087|Gt(ROSA)26asSor|Gtrosa26as","THUMP domain containing 3","protein-coding"]
[6490,"chr5",135186449,135188331,"+",0,"NA","promoter-TSS (NM_011714)","promoter-TSS (NM_011714)",67,"NM_011714",22385,"Mm.40331","NM_011714","ENSMUSG00000002748","Baz1b","C87820|WSTF|Wbscr9","bromodomain adjacent to zinc finger domain, 1B","protein-coding"]
[5044,"chr3",35753267,35755021,"+",0,"NA","promoter-TSS (NM_029570)","promoter-TSS (NM_029570)",6,"NM_029570",76295,"Mm.239416","NM_029570","ENSMUSG00000037400","Atp11b","1110019I14Rik|ATPIF|ATPIR|mKIAA0956","ATPase, class VI, type 11B","protein-coding"]
[2455,"chr14",51883879,51885248,"+",0,"NA","promoter-TSS (NM_001029990)","promoter-TSS (NM_001029990)",-279,"NM_001029990",52535,"Mm.5750","NM_001029990","ENSMUSG00000004561","Mettl17","2310032K15Rik|D14Ertd209e|Mett11d1","methyltransferase like 17","protein-coding"]
[3592,"chr17",46496902,46498579,"+",0,"NA","intron (NM_207161, intron 1 of 3)","ID_B1|SINE|B4",951,"NM_207161",381101,"Mm.35801","NM_207161","ENSMUSG00000040658","Dnph1","C76683|Rcl","2'-deoxynucleoside 5'-phosphate N-hydrolase 1","protein-coding"]
[395,"chr1",166000904,166003669,"+",0,"NA","intron (NM_011137, intron 1 of 16)","CpG",348,"NM_198932",18986,"Mm.245261","NM_011137","ENSMUSG00000026565","Pou2f1","2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1","POU domain, class 2, transcription factor 1","protein-coding"]
[2295,"chr13",101690227,101695905,"+",0,"NA","promoter-TSS (NM_001024955)","promoter-TSS (NM_001024955)",-436,"NM_001024955",18708,"Mm.259333","NM_001024955","ENSMUSG00000041417","Pik3r1","PI3K|p50alpha|p55alpha|p85alpha","phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)","protein-coding"]
[7982,"chr8",83714807,83717519,"+",0,"NA","intron (NM_197982, intron 1 of 10)","intron (NM_197982, intron 1 of 10)",986,"NM_197982",68278,"Mm.28222","NM_197982","ENSMUSG00000005481","Ddx39","2610307C23Rik|BAT1|DDXL|Ddx39a|URH49","DEAD (Asp-Glu-Ala-Asp) box polypeptide 39","protein-coding"]
[7454,"chr7",98655499,98657314,"+",0,"NA","intron (NM_172280, intron 1 of 19)","CpG",163,"NM_172280",233545,"Mm.387819","NM_172280","ENSMUSG00000035401","Emsy","2210018M11Rik|2310016L09Rik|AU019521|AU019557","EMSY, BRCA2-interacting transcriptional repressor","protein-coding"]
[5965,"chr4",148150758,148152491,"+",0,"NA","5' UTR (NM_001163704, exon 1 of 6)","5' UTR (NM_001163704, exon 1 of 6)",301,"NM_001163705",50762,"Mm.27445","NM_015797","ENSMUSG00000055401","Fbxo6","AA408845|FBG2|Fbs2|Fbx6b|Fbxo6b","F-box protein 6","protein-coding"]
[6480,"chr5",134582837,134583627,"+",0,"NA","intron (NM_020022, intron 1 of 10)","ID_B1|SINE|B4",542,"NM_020022",19718,"Mm.332739","NM_020022",null,"Rfc2","2610008M13Rik|40kDa|AI326953|Recc2","replication factor C (activator 1) 2","protein-coding"]
[8082,"chr8",105224638,105225973,"+",0,"NA","5' UTR (NM_145604, exon 1 of 16)","5' UTR (NM_145604, exon 1 of 16)",117,"NM_145604",234678,"Mm.27186","NM_145604","ENSMUSG00000031889","D230025D16Rik","BC006874|Lin10","RIKEN cDNA D230025D16 gene","protein-coding"]
[6242,"chr5",77090562,77096296,"+",0,"NA","intron (NM_175606, intron 2 of 2)","intron (NM_175606, intron 2 of 2)",1838,"NM_001159901",74318,"Mm.181852","NM_175606","ENSMUSG00000059325","Hopx","1110018K11Rik|1200015P04Rik|2300002F06Rik|AI848177|AW490897|Cameo|Hdop|Hod|Hop|Ob1|Obl|Toto","HOP homeobox","protein-coding"]
[4609,"chr2",91648968,91651234,"+",0,"NA","promoter-TSS (NM_001145902)","promoter-TSS (NM_001145902)",-17,"NR_027372",228359,"Mm.22413","NM_146124","ENSMUSG00000027247","Arhgap1","B230365D05Rik|C76222|Cdc42GAP|p50rhoGAP","Rho GTPase activating protein 1","protein-coding"]
[1671,"chr11",120377970,120379350,"+",0,"NA","promoter-TSS (NM_027980)","promoter-TSS (NM_027980)",86,"NM_027980",71885,"Mm.274890","NM_027980","ENSMUSG00000025384","Faap100","2310003H01Rik","Fanconi anemia core complex associated protein 100","protein-coding"]
[830,"chr10",93888825,93890324,"+",0,"NA","exon (NM_019648, exon 2 of 12)","exon (NM_019648, exon 2 of 12)",1628,"NM_019648",56307,"Mm.289329","NM_019648","ENSMUSG00000036112","Metap2","4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2","methionine aminopeptidase 2","protein-coding"]
[1101,"chr11",51688167,51689952,"+",0,"NA","promoter-TSS (NM_025319)","promoter-TSS (NM_025319)",-425,"NM_025319",66050,"Mm.35693","NM_025319","ENSMUSG00000007777","0610009B22Rik","-","RIKEN cDNA 0610009B22 gene","protein-coding"]
[3940,"chr18",73570669,73575124,"+",0,"NA","5' UTR (NM_001039214, exon 1 of 2)","5' UTR (NM_001039214, exon 1 of 2)",191,"NM_001039214",240396,"Mm.24131","NM_001039214","ENSMUSG00000037253","Mex3c","A130001D14Rik|BC035207|BM-013|Rkhd2","mex3 homolog C (C. elegans)","protein-coding"]
[7685,"chr7",141116480,141119566,"+",0,"NA","promoter-TSS (NM_178381)","promoter-TSS (NM_178381)",-217,"NM_178381",71345,"Mm.235813","NM_178381","ENSMUSG00000054662","Ano9","5430425C04Rik|Tmem16j|Tp53i5|Trp53i5","anoctamin 9","protein-coding"]
[440,"chr1",176813331,176815298,"+",0,"NA","promoter-TSS (NM_029756)","promoter-TSS (NM_029756)",-346,"NM_029756",76816,"Mm.171399","NM_029756","ENSMUSG00000026504","Sdccag8","2700048G21Rik|5730470G24Rik|Cccap","serologically defined colon cancer antigen 8","protein-coding"]
[1044,"chr11",30770891,30772971,"+",0,"NA","5' UTR (NM_134013, exon 1 of 47)","5' UTR (NM_134013, exon 1 of 47)",156,"NM_134013",103554,"Mm.240066","NM_134013","ENSMUSG00000040850","Psme4","AA409398|AU041366|TEMO|mKIAA0077","proteasome (prosome, macropain) activator subunit 4","protein-coding"]
[8258,"chr9",15279424,15280667,"+",0,"NA","promoter-TSS (NM_144933)","promoter-TSS (NM_144933)",-178,"NM_144933",234959,"Mm.44151","NM_144933","ENSMUSG00000031935","Med17","77kDa|C330002H14Rik|Crsp6|Trap80","mediator complex subunit 17","protein-coding"]
[2137,"chr13",51845760,51846116,"+",0,"NA","promoter-TSS (NM_011817)","promoter-TSS (NM_011817)",-737,"NM_011817",23882,"Mm.281298","NM_011817","ENSMUSG00000021453","Gadd45g","AI327420|C86281|CR6|DDIT2|OIG37","growth arrest and DNA-damage-inducible 45 gamma","protein-coding"]
[467,"chr1",181841645,181843017,"+",0,"NA","promoter-TSS (NM_133815)","promoter-TSS (NM_133815)",70,"NM_133815",98386,"Mm.4538","NM_133815","ENSMUSG00000004880","Lbr","AI505894|ic","lamin B receptor","protein-coding"]
[8001,"chr8",84832036,84832774,"+",0,"NA","promoter-TSS (NR_033145)","promoter-TSS (NR_033145)",123,"NM_183358",102060,"Mm.489649","NM_183358",null,"Gadd45gip1","2310040G17Rik|AI425883|Crif1|MRP-L59|Plinp1","growth arrest and DNA-damage-inducible, gamma interacting protein 1","protein-coding"]
[3248,"chr16",91618614,91618879,"+",0,"NA","5' UTR (NM_001099738, exon 1 of 2)","5' UTR (NM_001099738, exon 1 of 2)",253,"NM_001099738",246738,"Mm.101927","NM_138664","ENSMUSG00000039763","Dnajc28","BC020175|ORF28","DnaJ (Hsp40) homolog, subfamily C, member 28","protein-coding"]
[68,"chr1",39535422,39536329,"+",0,"NA","promoter-TSS (NM_028043)","promoter-TSS (NM_028043)",73,"NM_028043",52846,"Mm.259421","NM_028043","ENSMUSG00000003135","Cnot11","2410015L18Rik|C40|D1Bwg0212e","CCR4-NOT transcription complex, subunit 11","protein-coding"]
[5081,"chr3",57573715,57577348,"+",0,"NA","intron (NM_001168281, intron 1 of 6)","CpG",345,"NM_133784",97064,"Mm.405029","NM_133784","ENSMUSG00000027803","Wwtr1","2310058J06Rik|2610021I22Rik|C78399|Taz","WW domain containing transcription regulator 1","protein-coding"]
[5961,"chr4",147936470,147936887,"+",0,"NA","promoter-TSS (NM_011122)","promoter-TSS (NM_011122)",98,"NM_011122",18822,"Mm.23951","NM_011122","ENSMUSG00000019055","Plod1","2410042F05Rik|AI854890|AV007929|Lh1|Plod","procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1","protein-coding"]
[6322,"chr5",110135239,110136376,"+",0,"NA","promoter-TSS (NM_001289578)","promoter-TSS (NM_001289578)",-23,"NM_172717",231600,"Mm.30264","NM_172717","ENSMUSG00000014668","Chfr","5730484M20Rik|C230082M18|RNF116","checkpoint with forkhead and ring finger domains","protein-coding"]
[8313,"chr9",24502512,24503999,"+",0,"NA","promoter-TSS (NM_172920)","promoter-TSS (NM_172920)",-115,"NM_172920",244745,"Mm.38526","NM_172920","ENSMUSG00000043067","Dpy19l1","1100001I19Rik|6030402K12|AI225861|AW558481","dpy-19-like 1 (C. elegans)","protein-coding"]
[217,"chr1",88133953,88134508,"+",0,"NA","promoter-TSS (NM_145079)","promoter-TSS (NM_145079)",-579,"NM_145079",94284,"Mm.300095","NM_145079",null,"Ugt1a6a","UDPGT|UDPGT 1-6|UGT1-06|UGT1.6|Ugt1a6|Ugt1a7","UDP glucuronosyltransferase 1 family, polypeptide A6A","protein-coding"]
[8866,"chrX",74312307,74313479,"+",0,"NA","promoter-TSS (NM_138607)","promoter-TSS (NM_138607)",-140,"NM_138607",108160,"Mm.4370","NM_138607","ENSMUSG00000001962","Fam50a","D0HXS9928E|XAP-5","family with sequence similarity 50, member A","protein-coding"]
[6415,"chr5",122707048,122708681,"+",0,"NA","intron (NM_001310720, intron 1 of 10)","CpG",320,"NM_001310718",18438,"Mm.290884","NM_011026","ENSMUSG00000029470","P2rx4","AI504491|AW555605|D5Ertd444e|P2X4","purinergic receptor P2X, ligand-gated ion channel 4","protein-coding"]
[472,"chr1",182340964,182342070,"+",0,"NA","promoter-TSS (NM_175127)","promoter-TSS (NM_175127)",89,"NM_175127",67948,"Mm.30737","NM_175127","ENSMUSG00000047539","Fbxo28","4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483","F-box protein 28","protein-coding"]
[132,"chr1",60097236,60098801,"+",0,"NA","promoter-TSS (NM_001285463)","promoter-TSS (NM_001285463)",-111,"NM_021312",57750,"Mm.281079","NM_021312","ENSMUSG00000026019","Wdr12","4933402C23Rik|Ytm1|Ytm1p","WD repeat domain 12","protein-coding"]
[2180,"chr13",59821887,59826287,"+",0,"NA","promoter-TSS (NM_153538)","promoter-TSS (NM_153538)",-940,"NM_153538",214290,"Mm.233082","NM_153538","ENSMUSG00000035248","Zcchc6","6030448M23Rik|AA420405","zinc finger, CCHC domain containing 6","protein-coding"]
[2769,"chr15",76080221,76081461,"+",0,"NA","promoter-TSS (NM_001164600)","promoter-TSS (NM_001164600)",29,"NM_001164600",67959,"Mm.29965","NM_028364","ENSMUSG00000002524","Puf60","2410104I19Rik|2810454F19Rik|SIAHBP1","poly-U binding splicing factor 60","protein-coding"]
[4992,"chr2",181241704,181242428,"+",0,"NA","promoter-TSS (NM_183162)","promoter-TSS (NM_183162)",-39,"NM_183162",229003,"Mm.315872","NM_183162","ENSMUSG00000027580","Helz2","PDIP1|Pric285|mKIAA1769|mPDIP1","helicase with zinc finger 2, transcriptional coactivator","protein-coding"]
[2279,"chr13",98316223,98317543,"+",0,"NA","promoter-TSS (NM_145455)","promoter-TSS (NM_145455)",84,"NM_145455",218490,"Mm.371688","NM_145455","ENSMUSG00000021660","Btf3","1700054E11Rik","basic transcription factor 3","protein-coding"]
[4621,"chr2",93822054,93822505,"+",0,"NA","intron (NM_010163, intron 1 of 13)","intron (NM_010163, intron 1 of 13)",289,"NM_010163",14043,"Mm.4336","NM_010163","ENSMUSG00000027198","Ext2","AI893565","exostoses (multiple) 2","protein-coding"]
[4831,"chr2",151571776,151573804,"+",0,"NA","intron (NM_145535, intron 1 of 8)","intron (NM_145535, intron 1 of 8)",167,"NM_145535",228765,"Mm.32068","NM_145535","ENSMUSG00000027456","Sdcbp2","-","syndecan binding protein (syntenin) 2","protein-coding"]
[4757,"chr2",129066037,129066748,"+",0,"NA","intron (NM_027192, intron 1 of 6)","intron (NM_027192, intron 1 of 6)",445,"NM_027192",69737,"Mm.33909","NM_027192","ENSMUSG00000027394","Ttl","2410003M22Rik|2700049H19Rik|AI848570","tubulin tyrosine ligase","protein-coding"]
[1838,"chr12",73123718,73124215,"+",0,"NA","intron (NM_008612, intron 1 of 7)","intron (NM_008612, intron 1 of 7)",249,"NM_008612",17420,"Mm.246750","NM_008612","ENSMUSG00000021103","Mnat1","E130115E11Rik|MAT1|P36","menage a trois 1","protein-coding"]
[7279,"chr7",43779440,43784205,"+",0,"NA","intron (NM_133712, intron 2 of 5)","intron (NM_133712, intron 2 of 5)",768,"NM_133712",69540,"Mm.46421","NM_133712","ENSMUSG00000030693","Klk10","2300002A13Rik|NES1|PRSSL1","kallikrein related-peptidase 10","protein-coding"]
[2860,"chr15",83122341,83122740,"+",0,"NA","intron (NM_029101, intron 1 of 6)","CpG",261,"NM_029101",74778,"Mm.30056","NM_029101","ENSMUSG00000018040","Rrp7a","1110014J01Rik|AA408146|Kheg1","ribosomal RNA processing 7 homolog A (S. cerevisiae)","protein-coding"]
[6450,"chr5",125388488,125395134,"+",0,"NA","Intergenic","Intergenic",-1794,"NM_019639",22190,"Mm.331","NM_019639","ENSMUSG00000008348","Ubc","2700054O04Rik|AI194771|Rps27a|TI-225|Uba52|Ubb","ubiquitin C","protein-coding"]
[7412,"chr7",81788781,81790008,"+",0,"NA","promoter-TSS (NM_026077)","promoter-TSS (NM_026077)",59,"NM_026077",67290,"Mm.248391","NM_026077","ENSMUSG00000025102","3110040N11Rik","AI851475","RIKEN cDNA 3110040N11 gene","protein-coding"]
[8106,"chr8",106057947,106060799,"+",0,"NA","promoter-TSS (NM_010901)","promoter-TSS (NM_010901)",-230,"NM_010901",18021,"Mm.383185","NM_010901","ENSMUSG00000031902","Nfatc3","C80703|D8Ertd281e|NFAT4|NFATx","nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3","protein-coding"]
[5011,"chr3",9002565,9004952,"+",0,"NA","intron (NM_009412, intron 1 of 5)","intron (NM_009412, intron 1 of 5)",757,"NM_009412",21985,"Mm.371590","NM_009412","ENSMUSG00000027506","Tpd52","AI043038|mD52","tumor protein D52","protein-coding"]
[5270,"chr3",100969438,100970005,"+",0,"NA","promoter-TSS (NM_001013026)","promoter-TSS (NM_001013026)",-58,"NM_001013026",74044,"Mm.270961","NM_001013026","ENSMUSG00000033222","Ttf2","4632434F22Rik|8030447N19|AV218430","transcription termination factor, RNA polymerase II","protein-coding"]
[2351,"chr14",19823168,19824400,"+",0,"NA","promoter-TSS (NM_026528)","promoter-TSS (NM_026528)",39,"NM_026528",68045,"Mm.21932","NM_026528","ENSMUSG00000021807","2700060E02Rik","-","RIKEN cDNA 2700060E02 gene","protein-coding"]
[1231,"chr11",69900617,69902697,"+",0,"NA","promoter-TSS (NM_001013414)","promoter-TSS (NM_001013414)",-159,"NM_001291118",216860,"Mm.268347","NM_001013414","ENSMUSG00000047284","Neurl4","-","neuralized E3 ubiquitin protein ligase 4","protein-coding"]
[7904,"chr8",70283020,70283945,"+",0,"NA","intron (NM_011984, intron 1 of 9)","CpG",483,"NM_001146153",26558,"Mm.388127","NM_011984","ENSMUSG00000003573","Homer3","AW146114","homer homolog 3 (Drosophila)","protein-coding"]
[7028,"chr6",148944515,148947503,"+",0,"NA","intron (NM_019643, intron 1 of 5)","CpG",423,"NM_019643",56306,"Mm.18637","NM_019643","ENSMUSG00000039985","Fam60a","Ppcs1|Pptcs1|Tera","family with sequence similarity 60, member A","protein-coding"]
[5864,"chr4",133671105,133673412,"+",0,"NA","intron (NM_178698, intron 1 of 3)","intron (NM_178698, intron 1 of 3)",389,"NM_001145955",230801,"Mm.217004","NM_178698",null,"Pigv","B330013B03|D430024F16Rik","phosphatidylinositol glycan anchor biosynthesis, class V","protein-coding"]
[7104,"chr7",19023704,19024898,"+",0,"NA","promoter-TSS (NM_008260)","promoter-TSS (NM_008260)",-76,"NM_026605",68188,"Mm.130902","NM_026605","ENSMUSG00000023118","Sympk","1500016F02Rik|4632415H16Rik|AA125406|AI449890|SPK|SYM","symplekin","protein-coding"]
[7801,"chr8",25840227,25841748,"+",0,"NA","promoter-TSS (NM_011791)","promoter-TSS (NM_011791)",-200,"NM_011791",23808,"Mm.27706","NM_011791","ENSMUSG00000031575","Ash2l","-","ash2 (absent, small, or homeotic)-like (Drosophila)","protein-coding"]
[344,"chr1",152901895,152905112,"+",0,"NA","promoter-TSS (NM_001160256)","promoter-TSS (NM_001160256)",-857,"NM_001005507",226517,"Mm.270775","NM_001005507","ENSMUSG00000042772","Smg7","9430023P16Rik|mKIAA0250","Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)","protein-coding"]
[6577,"chr5",143624025,143624293,"+",0,"NA","intron (NM_011182, intron 1 of 12)","intron (NM_011182, intron 1 of 12)",1712,"NM_011182",19159,"Mm.281003","NM_011182","ENSMUSG00000018001","Cyth3","AI648983|ARNO3|CLM3|Grp1|Pscd3","cytohesin 3","protein-coding"]
[6624,"chr6",5255453,5256645,"+",0,"NA","intron (NM_173006, intron 1 of 8)","intron (NM_173006, intron 1 of 8)",184,"NM_173006",269823,"Mm.9122","NM_173006","ENSMUSG00000029759","Pon3","2810004E20|AI786302","paraoxonase 3","protein-coding"]
[7442,"chr7",96211904,96214654,"+",0,"NA","intron (NM_001310760, intron 1 of 32)","intron (NM_001310760, intron 1 of 32)",1608,"NM_001310760",23966,"Mm.254610","NM_011858","ENSMUSG00000048078","Tenm4","Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302","teneurin transmembrane protein 4","protein-coding"]
[5080,"chr3",55112085,55113277,"+",0,"NA","intron (NM_001144987, intron 1 of 8)","intron (NM_001144987, intron 1 of 8)",515,"NM_001144987",229285,"Mm.235523","NM_144895","ENSMUSG00000036580","Spg20","AI840044|C79168|SPARTIN|TAHCCP1|mKIAA0610","spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)","protein-coding"]
[5683,"chr4",113284616,113287564,"+",0,"NA","intron (NM_001103199, intron 1 of 48)","(TG)n|Simple_repeat|Simple_repeat",883,"NM_001103199",230622,"Mm.291107","NM_001103199","ENSMUSG00000087194","Skint6","OTTMUSG00000008519","selection and upkeep of intraepithelial T cells 6","protein-coding"]
[3651,"chr17",56756931,56761174,"+",0,"NA","Intergenic","Intergenic",-1522,"NM_008738",18188,"Mm.8074","NM_008738","ENSMUSG00000039481","Nrtn","NTN","neurturin","protein-coding"]
[4157,"chr19",24960683,24961553,"+",0,"NA","intron (NM_146097, intron 1 of 14)","intron (NM_146097, intron 1 of 14)",498,"NR_033744",226043,"Mm.272127","NM_146097","ENSMUSG00000024878","Cbwd1","AV349248|BC018472","COBW domain containing 1","protein-coding"]
[8062,"chr8",95080236,95081804,"+",0,"NA","promoter-TSS (NM_028805)","promoter-TSS (NM_028805)",-181,"NM_028805",74187,"Mm.28382","NM_028805","ENSMUSG00000031787","Katnb1","2410003J24Rik|KAT","katanin p80 (WD40-containing) subunit B 1","protein-coding"]
[2253,"chr13",91460140,91463256,"+",0,"NA","intron (NM_024186, intron 1 of 15)","CpG",601,"NM_024186",66970,"Mm.343095","NM_024186","ENSMUSG00000003992","Ssbp2","1500004K09Rik|2310079I02Rik|9330163K02Rik|A830008M03Rik|AU067692|AW558684|Hspc116|SSDP2","single-stranded DNA binding protein 2","protein-coding"]
[5777,"chr4",126201274,126203739,"+",0,"NA","intron (NM_146153, intron 1 of 10)","CpG",204,"NM_146153",230753,"Mm.29813","NM_146153","ENSMUSG00000043962","Thrap3","9330151F09Rik|B230333E16Rik|Trap150","thyroid hormone receptor associated protein 3","protein-coding"]
[6310,"chr5",108065376,108066276,"+",0,"NA","non-coding (NR_045608, exon 1 of 17)","non-coding (NR_045608, exon 1 of 17)",152,"NM_013827",17765,"Mm.257149","NM_013827","ENSMUSG00000029267","Mtf2","9230112N11Rik|AA537621|C76717|M96|Pcl2","metal response element binding transcription factor 2","protein-coding"]
[670,"chr10",62791549,62793169,"+",0,"NA","promoter-TSS (NM_026201)","promoter-TSS (NM_026201)",9,"NM_026201",67500,"Mm.196371","NM_026201","ENSMUSG00000020074","Ccar1","2610511G16Rik|9430036H15Rik|Carp1","cell division cycle and apoptosis regulator 1","protein-coding"]
[2739,"chr15",64381729,64383121,"+",0,"NA","intron (NM_001276467, intron 1 of 29)","CpG",494,"NM_001276461",13196,"Mm.277236","NM_010026","ENSMUSG00000022377","Asap1","AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19","ArfGAP with SH3 domain, ankyrin repeat and PH domain1","protein-coding"]
[149,"chr1",66174842,66176183,"+",0,"NA","intron (NM_008632, intron 1 of 13)","CpG",183,"NM_001039934",17756,"Mm.256966","NM_008632","ENSMUSG00000015222","Map2","G1-397-34|MAP-2|Mtap-2|Mtap2|repro4","microtubule-associated protein 2","protein-coding"]
[6066,"chr5",21054738,21056735,"+",0,"NA","promoter-TSS (NM_011203)","promoter-TSS (NM_011203)",61,"NM_011203",19248,"Mm.319117","NM_011203","ENSMUSG00000028771","Ptpn12","P19-PTP|PTP-P19|PTP-PEST|PTPG1","protein tyrosine phosphatase, non-receptor type 12","protein-coding"]
[4798,"chr2",142900605,142903333,"+",0,"NA","promoter-TSS (NR_131921)","promoter-TSS (NR_131921)",-505,"NM_001081133",16558,"Mm.251934","NM_001081133","ENSMUSG00000038844","Kif16b","8430434E15Rik|AA623607|AI789011|C80253|C80902|mKIAA1590","kinesin family member 16B","protein-coding"]
[8874,"chrX",75382491,75382806,"+",0,"NA","intron (NM_026126, intron 1 of 4)","intron (NM_026126, intron 1 of 4)",249,"NM_026126",67391,"Mm.126404","NM_026126",null,"Fundc2","4833415N24Rik|DC44|HCBP6","FUN14 domain containing 2","protein-coding"]
[1880,"chr12",81859981,81861252,"+",0,"NA","intron (NM_018814, intron 1 of 35)","CpG",586,"NM_018814",54604,"Mm.86584","NM_018814","ENSMUSG00000021140","Pcnx","2900024E21Rik|3526401J03Rik|AF096286|AI327143|AI413187|Pcnxl1","pecanex homolog (Drosophila)","protein-coding"]
[4883,"chr2",156475140,156476938,"+",0,"NA","intron (NM_001006664, intron 1 of 21)","intron (NM_001006664, intron 1 of 21)",505,"NM_001006664",13821,"Mm.20852","NM_013510","ENSMUSG00000027624","Epb41l1","4.1N|Epb4.1l1|NBL1|mKIAA0338","erythrocyte membrane protein band 4.1 like 1","protein-coding"]
[4805,"chr2",144550630,144551201,"+",0,"NA","promoter-TSS (NM_015754)","promoter-TSS (NM_015754)",-56,"NM_015754",26450,"Mm.440564","NM_015754","ENSMUSG00000027428","Rbbp9","Bog","retinoblastoma binding protein 9","protein-coding"]
[2930,"chr15",98917252,98918638,"+",0,"NA","5' UTR (NM_029098, exon 1 of 17)","5' UTR (NM_029098, exon 1 of 17)",153,"NM_029098",74775,"Mm.385020","NM_029098","ENSMUSG00000022999","Lmbr1l","1110013E13Rik|AA415653|D15Ertd735e|Limr","limb region 1 like","protein-coding"]
[1070,"chr11",45851964,45852846,"+",0,"NA","intron (NM_001045520, intron 1 of 11)","CpG",441,"NM_001045520",216705,"Mm.169673","NM_001045520","ENSMUSG00000006169","Clint1","AI642036|AW537616|C530049I24Rik|Enth|Epn4|F630206G17Rik|mKIAA0171","clathrin interactor 1","protein-coding"]
[3117,"chr16",31080759,31081343,"+",0,"NA","exon (NM_198626, exon 1 of 4)","exon (NM_198626, exon 1 of 4)",381,"NM_198626",268880,"Mm.286693","NM_198626","ENSMUSG00000047434","Xxylt1","AI480653","xyloside xylosyltransferase 1","protein-coding"]
[4332,"chr2",11704931,11710180,"+",0,"NA","intron (NM_001271500, intron 1 of 5)","L1ME1|LINE|L1",1843,"NM_001271500",16169,"Mm.200196","NM_008358","ENSMUSG00000023206","Il15ra","AA690181|IL-15RA","interleukin 15 receptor, alpha chain","protein-coding"]
[5038,"chr3",32364419,32367229,"+",0,"NA","promoter-TSS (NM_009517)","promoter-TSS (NM_009517)",-159,"NM_009517",22401,"Mm.35705","NM_009517","ENSMUSG00000027663","Zmat3","Wig1","zinc finger matrin type 3","protein-coding"]
[559,"chr10",19907211,19907738,"+",0,"NA","exon (NM_008822, exon 1 of 10)","exon (NM_008822, exon 1 of 10)",200,"NM_008822",18634,"Mm.338363","NM_008822","ENSMUSG00000020003","Pex7","MmPEX7","peroxisomal biogenesis factor 7","protein-coding"]
[6579,"chr5",143909184,143910415,"+",0,"NA","promoter-TSS (NM_001172146)","promoter-TSS (NM_001172146)",40,"NM_001172146",231872,"Mm.200499","NM_146165","ENSMUSG00000029610","Aimp2","AA407136|AA407225|Aimp2(p38)|Jtv1","aminoacyl tRNA synthetase complex-interacting multifunctional protein 2","protein-coding"]
[5655,"chr4",107879164,107880479,"+",0,"NA","promoter-TSS (NM_001282737)","promoter-TSS (NM_001282737)",66,"NM_001282737",17149,"Mm.808","NM_001282737","ENSMUSG00000028609","Magoh","Mago-m|Mos2","mago homolog, exon junction complex core component","protein-coding"]
[6236,"chr5",76139308,76141657,"+",0,"NA","exon (NM_020611, exon 1 of 6)","exon (NM_020611, exon 1 of 6)",209,"NM_020611",57357,"Mm.289446","NM_020611","ENSMUSG00000029233","Srd5a3","1110025P14Rik|A430076C09|AV364670|AW987574|D730040M03Rik|H5ar|S5AR 3|Srd5a2l","steroid 5 alpha-reductase 3","protein-coding"]
[2800,"chr15",77306065,77307651,"+",0,"NA","5' UTR (NM_053104, exon 1 of 14)","5' UTR (NM_053104, exon 1 of 14)",195,"NM_001110827",93686,"Mm.202774","NM_053104","ENSMUSG00000033565","Rbfox2","Fbm2|Fxh|Hrnbp2|Rbm9","RNA binding protein, fox-1 homolog (C. elegans) 2","protein-coding"]
[5818,"chr4",129695736,129697080,"+",0,"NA","intron (NM_199305, intron 1 of 8)","intron (NM_199305, intron 1 of 8)",430,"NM_199305",230770,"Mm.257157","NM_199305","ENSMUSG00000053730","Tmem39b","6330509E05Rik|BC037095","transmembrane protein 39b","protein-coding"]
[8627,"chr9",106684226,106687172,"+",0,"NA","5' UTR (NM_011573, exon 1 of 6)","5' UTR (NM_011573, exon 1 of 6)",117,"NM_011573",21767,"Mm.22266","NM_011573","ENSMUSG00000040813","Tex264","TEG-264","testis expressed gene 264","protein-coding"]
[4093,"chr19",8721971,8724553,"+",0,"NA","promoter-TSS (NR_002896)","promoter-TSS (NR_002896)",107,"NM_001161413",17254,"Mm.4114","NM_008577","ENSMUSG00000010095","Slc3a2","4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE","solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2","protein-coding"]
[4439,"chr2",30392368,30394187,"+",0,"NA","intron (NM_001290509, intron 1 of 6)","MIRb|SINE|MIR",1023,"NM_001290508",57170,"Mm.285167","NM_020329","ENSMUSG00000026856","Dolpp1","0610011H20Rik|AB030189|LSFR2","dolichyl pyrophosphate phosphatase 1","protein-coding"]
[4160,"chr19",26747041,26748582,"+",0,"NA","promoter-TSS (NM_026003)","promoter-TSS (NM_026003)",-592,"NM_026003",67155,"Mm.491146","NM_011416","ENSMUSG00000024921","Smarca2","2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm","SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2","protein-coding"]
[5104,"chr3",67430183,67430505,"+",0,"NA","intron (NM_138591, intron 1 of 17)","CpG",229,"NM_138591",28030,"Mm.122466","NM_138591",null,"Gfm1","AW545374|D3Wsu133e|Gfm","G elongation factor, mitochondrial 1","protein-coding"]
[7300,"chr7",45059699,45062906,"+",0,"NA","intron (NM_022999, intron 1 of 6)","intron (NM_022999, intron 1 of 6)",350,"NM_022999",65116,"Mm.379098","NM_022999","ENSMUSG00000007837","Prrg2","1600014G02Rik|2510041M06Rik|N4WBP1","proline-rich Gla (G-carboxyglutamic acid) polypeptide 2","protein-coding"]
[3541,"chr17",35860201,35862089,"+",0,"NA","promoter-TSS (NM_134122)","promoter-TSS (NM_134122)",-173,"NM_134122",106582,"Mm.390992","NM_134122","ENSMUSG00000059791","Nrm","2610307M02Rik|AI429796","nurim (nuclear envelope membrane protein)","protein-coding"]
[7019,"chr6",146642123,146643408,"+",0,"NA","intron (NM_025315, intron 1 of 3)","CpG",186,"NM_025315",108098,"Mm.26212","NM_025315","ENSMUSG00000030291","Med21","0610007L03Rik|AI449604|D19234|D6Ertd782e|Srb7|Surb7","mediator complex subunit 21","protein-coding"]
[4377,"chr2",25270796,25273261,"+",0,"NA","promoter-TSS (NM_175300)","promoter-TSS (NM_175300)",390,"NM_023464",68475,"Mm.21444","NM_023464","ENSMUSG00000026966","Ssna1","1110003H09Rik|1190004J23Rik|AA934184|N14|NA14","Sjogren's syndrome nuclear autoantigen 1","protein-coding"]
[4000,"chr19",4231262,4232747,"+",0,"NA","promoter-TSS (NR_132280)","promoter-TSS (NR_132280)",111,"NM_027196",69745,"Mm.32518","NM_027196","ENSMUSG00000024854","Pold4","2410012M21Rik|AI463381|AW060307|Polds|p12","polymerase (DNA-directed), delta 4","protein-coding"]
[1518,"chr11",101467675,101468710,"+",0,"NA","promoter-TSS (NM_009708)","promoter-TSS (NM_009708)",-146,"NM_009708",11858,"Mm.378883","NM_009708",null,"Rnd2","Arhn|Rohn","Rho family GTPase 2","protein-coding"]
[178,"chr1",75191082,75193087,"+",0,"NA","promoter-TSS (NR_051998)","promoter-TSS (NR_051998)",-74,"NM_001288613",245860,"Mm.238266","NM_001003917","ENSMUSG00000033124","Atg9a","AU019532|Apg9l1|Atg9|Atg9l1","autophagy related 9A","protein-coding"]
[5702,"chr4",116596001,116598213,"+",0,"NA","non-coding (NR_029450, exon 1 of 3)","non-coding (NR_029450, exon 1 of 3)",377,"NM_001037916",622665,"Mm.388905","NM_001037916","ENSMUSG00000034035","Ccdc17","-","coiled-coil domain containing 17","protein-coding"]
[1374,"chr11",86543959,86545856,"+",0,"NA","promoter-TSS (NM_001199047)","promoter-TSS (NM_001199047)",-84,"NM_001199045",56427,"Mm.383207","NM_019756","ENSMUSG00000020513","Tubd1","4930550G19Rik|Tubd","tubulin, delta 1","protein-coding"]
[5672,"chr4",109475380,109476988,"+",0,"NA","exon (NM_013876, exon 1 of 3)","exon (NM_013876, exon 1 of 3)",321,"NM_013876",29864,"Mm.392580","NM_013876","ENSMUSG00000028557","Rnf11","-","ring finger protein 11","protein-coding"]
[5294,"chr3",105704348,105706696,"+",0,"NA","promoter-TSS (NM_001163356)","promoter-TSS (NM_001163356)",64,"NM_001163356",109050,"Mm.212591","NM_175398","ENSMUSG00000048458","Fam212b","6530418L21Rik","family with sequence similarity 212, member B","protein-coding"]
[4862,"chr2",155073825,155075232,"+",0,"NA","promoter-TSS (NM_016661)","promoter-TSS (NM_016661)",-31,"NM_016661",269378,"Mm.330692","NM_016661","ENSMUSG00000027597","Ahcy","AA987153|AL024110|CuBP|SAHH","S-adenosylhomocysteine hydrolase","protein-coding"]
[1202,"chr11",67052057,67053083,"+",0,"NA","promoter-TSS (NM_001040026)","promoter-TSS (NM_001040026)",48,"NM_025510",66358,"Mm.22511","NM_025510","ENSMUSG00000020910","Adprm","2310004I24Rik|MDS006","ADP-ribose/CDP-alcohol diphosphatase, manganese dependent","protein-coding"]
[6996,"chr6",135167579,135168123,"+",0,"NA","intron (NM_013546, intron 1 of 3)","intron (NM_013546, intron 1 of 3)",364,"NM_013546",15199,"Mm.378937","NM_013546","ENSMUSG00000042770","Hebp1","Hebp","heme binding protein 1","protein-coding"]
[8564,"chr9",88438186,88440244,"+",0,"NA","promoter-TSS (NM_172926)","promoter-TSS (NM_172926)",-264,"NM_172926",244962,"Mm.439873","NM_172926","ENSMUSG00000032422","Snx14","B830022K16|C330035N22Rik|YR-14","sorting nexin 14","protein-coding"]
[113,"chr1",58028806,58031231,"+",0,"NA","promoter-TSS (NM_009676)","promoter-TSS (NM_009676)",49,"NM_009676",11761,"Mm.26787","NM_009676","ENSMUSG00000063558","Aox1","AI196512|AI255253|Ao|Aox-1|Aox-2|Aox2|Moro|Ro","aldehyde oxidase 1","protein-coding"]
[7021,"chr6",146888028,146889378,"+",0,"NA","intron (NM_001170433, intron 1 of 27)","CpG",209,"NM_026221",67533,"Mm.103382","NM_026221","ENSMUSG00000016487","Ppfibp1","4632409B19Rik|AW214454|AW261454","PTPRF interacting protein, binding protein 1 (liprin beta 1)","protein-coding"]
[4365,"chr2",24346259,24348105,"+",0,"NA","intron (NM_001159562, intron 2 of 4)","intron (NM_001159562, intron 2 of 4)",1811,"NM_001039701",16181,"Mm.882","NM_031167","ENSMUSG00000026981","Il1rn","F630041P17Rik|IL-1ra","interleukin 1 receptor antagonist","protein-coding"]
[8440,"chr9",57560564,57564110,"+",0,"NA","intron (NM_022813, intron 1 of 8)","ID_B1|SINE|B4",1393,"NM_022813",24044,"Mm.286069","NM_022813","ENSMUSG00000040188","Scamp2","AI875466|Sc2","secretory carrier membrane protein 2","protein-coding"]
[6110,"chr5",30906910,30908093,"+",0,"NA","TTS (NM_001048192)","TTS (NM_001048192)",287,"NM_001134692",67695,"Mm.21450","NM_024460","ENSMUSG00000038803","Ost4","2310016E02Rik","oligosaccharyltransferase 4 homolog (S. cerevisiae)","protein-coding"]
[4030,"chr19",5423805,5425682,"+",0,"NA","promoter-TSS (NM_001256515)","promoter-TSS (NM_001256515)",236,"NM_024176",66556,"Mm.275446","NM_024176","ENSMUSG00000024914","Drap1","2310074H19Rik|NC2-alpha","Dr1 associated protein 1 (negative cofactor 2 alpha)","protein-coding"]
[3653,"chr17",56828906,56830619,"+",0,"NA","intron (NM_027787, intron 1 of 17)","intron (NM_027787, intron 1 of 17)",1246,"NM_009056",19725,"Mm.102","NM_009056","ENSMUSG00000024206","Rfx2","5430432H19Rik","regulatory factor X, 2 (influences HLA class II expression)","protein-coding"]
[5463,"chr4",21727127,21728315,"+",0,"NA","promoter-TSS (NM_001290422)","promoter-TSS (NM_001290422)",20,"NM_001290420",51813,"Mm.278584","NM_016746","ENSMUSG00000028252","Ccnc","AI451004|AU020987|CG1C","cyclin C","protein-coding"]
[2014,"chr13",12460048,12462208,"+",0,"NA","intron (NM_001291057, intron 1 of 8)","intron (NM_001291057, intron 1 of 8)",610,"NM_001291060",56048,"Mm.474138","NM_018886","ENSMUSG00000057554","Lgals8","1200015E08Rik|AI326142|D13Ertd524e|Lgals-8","lectin, galactose binding, soluble 8","protein-coding"]
[5140,"chr3",87948099,87948331,"+",0,"NA","promoter-TSS (NM_007759)","promoter-TSS (NM_007759)",-478,"NM_007759",12904,"Mm.4757","NM_007759","ENSMUSG00000004885","Crabp2","AI893628|Crabp-2|CrabpII","cellular retinoic acid binding protein II","protein-coding"]
[1342,"chr11",80428665,80429445,"+",0,"NA","intron (NM_178616, intron 1 of 13)","CpG",440,"NM_178616",69077,"Mm.260539","NM_178616","ENSMUSG00000017428","Psmd11","1700089D09Rik|1810019E17Rik|2610024G20Rik|2810055C24Rik|C78232|P44.5|S9","proteasome (prosome, macropain) 26S subunit, non-ATPase, 11","protein-coding"]
[2457,"chr14",51912878,51913963,"+",0,"NA","promoter-TSS (NM_013864)","promoter-TSS (NM_013864)",68,"NM_001145959",29811,"Mm.26722","NM_013864","ENSMUSG00000004558","Ndrg2","AI182517|AU040374|Ndr2|SYLD","N-myc downstream regulated gene 2","protein-coding"]
[5660,"chr4",108327214,108328435,"+",0,"NA","promoter-TSS (NM_027250)","promoter-TSS (NM_027250)",-328,"NM_027250",69893,"Mm.28354","NM_027250",null,"Coa7","2010305A19Rik|AI451324|D4Ertd796e|Selrc1","cytochrome c oxidase assembly factor 7","protein-coding"]
[3640,"chr17",56289523,56291884,"+",0,"NA","promoter-TSS (NM_025836)","promoter-TSS (NM_025836)",-192,"NM_025836",66905,"Mm.311696","NM_025836","ENSMUSG00000024197","Plin3","1300012C15Rik|M6prbp1|Tip47","perilipin 3","protein-coding"]
[3617,"chr17",47923680,47925750,"+",0,"NA","promoter-TSS (NM_028767)","promoter-TSS (NM_028767)",-83,"NM_001110825",74123,"Mm.240062","NM_028767","ENSMUSG00000023991","Foxp4","1200010K03Rik|2310007G05Rik|mFKHLA","forkhead box P4","protein-coding"]
[2043,"chr13",23554710,23557054,"+",0,"NA","TTS (NM_145713)","TTS (NM_145713)",850,"NM_145713",14957,"Mm.247046","NM_145713","ENSMUSG00000052565","Hist1h1d","H1.3|H1D|H1f3|H1s-4","histone cluster 1, H1d","protein-coding"]
[8064,"chr8",95331447,95333130,"+",0,"NA","promoter-TSS (NM_133954)","promoter-TSS (NM_133954)",4,"NM_133954",101985,"Mm.29069","NM_133954","ENSMUSG00000031792","Usb1","AA960436","U6 snRNA biogenesis 1","protein-coding"]
[3909,"chr18",62174365,62181626,"+",0,"NA","3' UTR (NM_007420, exon 1 of 1)","3' UTR (NM_007420, exon 1 of 1)",1986,"NM_007420",11555,"Mm.5598","NM_007420","ENSMUSG00000045730","Adrb2","Adrb-2|Badm|Gpcr7","adrenergic receptor, beta 2","protein-coding"]
[3736,"chr17",87264835,87266277,"+",0,"NA","intron (NM_176808, intron 1 of 4)","intron (NM_176808, intron 1 of 4)",391,"NM_176808",193813,"Mm.30251","NM_139295","ENSMUSG00000024150","Mcfd2","1810021C21Rik|F5f8d|Lman1ip|Sdnsf","multiple coagulation factor deficiency 2","protein-coding"]
[1310,"chr11",78031035,78032761,"+",0,"NA","promoter-TSS (NM_183286)","promoter-TSS (NM_183286)",-415,"NM_183286",70451,"Mm.390342","NM_183286","ENSMUSG00000020834","Dhrs13","2610209N15Rik","dehydrogenase/reductase (SDR family) member 13","protein-coding"]
[4703,"chr2",120153662,120155358,"+",0,"NA","promoter-TSS (NM_133838)","promoter-TSS (NM_133838)",65,"NM_133838",98878,"Mm.132226","NM_133838","ENSMUSG00000027293","Ehd4","2210022F10Rik|AI197390|AI846352|AV006278|Past2","EH-domain containing 4","protein-coding"]
[4489,"chr2",35281347,35283830,"+",0,"NA","exon (NM_146120, exon 1 of 17)","exon (NM_146120, exon 1 of 17)",208,"NM_146120",227753,"Mm.443","NM_146120","ENSMUSG00000026879","Gsn","ADF","gelsolin","protein-coding"]
[6939,"chr6",121129713,121130111,"+",0,"NA","intron (NM_001270475, intron 1 of 31)","intron (NM_001270475, intron 1 of 31)",1110,"NM_001270475",194401,"Mm.122399","NM_153396","ENSMUSG00000051586","Mical3","C130040D16Rik|Mical-3|mKIAA1364","microtubule associated monooxygenase, calponin and LIM domain containing 3","protein-coding"]
[769,"chr10",80917575,80918283,"+",0,"NA","intron (NM_010722, intron 1 of 11)","CpG",316,"NM_010722",16907,"Mm.7362","NM_010722","ENSMUSG00000062075","Lmnb2","-","lamin B2","protein-coding"]
[6009,"chr4",154297764,154301496,"+",0,"NA","intron (NM_001112744, intron 1 of 14)","intron (NM_001112744, intron 1 of 14)",265,"NM_001112744",230972,"Mm.38481","NM_001112744","ENSMUSG00000029032","Arhgef16","-","Rho guanine nucleotide exchange factor (GEF) 16","protein-coding"]
[6027,"chr4",155811495,155814096,"+",0,"NA","exon (NM_207678, exon 1 of 11)","exon (NM_207678, exon 1 of 11)",306,"NM_207678",56036,"Mm.23492","NM_018856","ENSMUSG00000029068","Ccnl2","1700010A01Rik|1810019L15Rik|2010319M22Rik|AA409936|AW261738|Ania-6b|HCLA-150|Pcee|SB138","cyclin L2","protein-coding"]
[5890,"chr4",135726432,135728962,"+",0,"NA","promoter-TSS (NM_178257)","promoter-TSS (NM_178257)",-462,"NM_178257",230828,"Mm.261647","NM_178257",null,"Il22ra1","9130219A07Rik|ENSMUSG00000073746|IL-22R|Il22r","interleukin 22 receptor, alpha 1","protein-coding"]
[1245,"chr11",70450666,70454391,"+",0,"NA","intron (NM_025397, intron 2 of 2)","PB1D11|SINE|Alu",597,"NM_025397",66172,"Mm.46424","NM_025397","ENSMUSG00000018923","Med11","1110030J09Rik|AI465144|AW545069","mediator complex subunit 11","protein-coding"]
[7273,"chr7",43462467,43466499,"+",0,"NA","intron (NM_001290316, intron 2 of 9)","intron (NM_001290316, intron 2 of 9)",1250,"NM_001290316",75690,"Mm.30200","NM_001290316","ENSMUSG00000070604","Vsig10l","-","V-set and immunoglobulin domain containing 10 like","protein-coding"]
[3085,"chr16",20672048,20675432,"+",0,"NA","intron (NM_001304432, intron 1 of 31)","intron (NM_001304432, intron 1 of 31)",1013,"NM_001304432",208643,"Mm.260256","NM_145941","ENSMUSG00000045983","Eif4g1","E030015G23Rik|eIF-4-gamma 1|eIF-4G 1|eIF-4G1|eIF4GI","eukaryotic translation initiation factor 4, gamma 1","protein-coding"]
[2202,"chr13",67332102,67333220,"+",0,"NA","promoter-TSS (NM_177622)","promoter-TSS (NM_177622)",-101,"NM_177622",218314,"Mm.289695","NM_177622","ENSMUSG00000057842","Zfp595","A230042K10Rik|Rslcan23","zinc finger protein 595","protein-coding"]
[1154,"chr11",59449833,59450886,"+",0,"NA","promoter-TSS (NM_144521)","promoter-TSS (NM_144521)",314,"NM_001205068",194952,"Mm.295954","NM_178659","ENSMUSG00000036819","Jmjd4","6430559I23","jumonji domain containing 4","protein-coding"]
[5237,"chr3",95687711,95688179,"+",0,"NA","promoter-TSS (NM_144899)","promoter-TSS (NM_144899)",-28,"NM_001301705",229595,"Mm.490574","NM_144899","ENSMUSG00000015850","Adamtsl4","ADAMTSL-4|Tsrc1","ADAMTS-like 4","protein-coding"]
[3076,"chr16",20140812,20141613,"+",0,"NA","5' UTR (NM_001033237, exon 1 of 30)","5' UTR (NM_001033237, exon 1 of 30)",149,"NM_001145930",208146,"Mm.390895","NM_001033237","ENSMUSG00000041215","Yeats2","BC042768|mKIAA1197","YEATS domain containing 2","protein-coding"]
[7558,"chr7",119794304,119794550,"+",0,"NA","promoter-TSS (NM_027698)","promoter-TSS (NM_027698)",240,"NM_001004187",434234,"Mm.38237","NM_028129","ENSMUSG00000030924","2610020H08Rik","-","RIKEN cDNA 2610020H08 gene","protein-coding"]
[6050,"chr5",3927916,3928928,"+",0,"NA","5' UTR (NM_194462, exon 1 of 48)","5' UTR (NM_194462, exon 1 of 48)",236,"NM_194462",100986,"Mm.46044","NM_194462","ENSMUSG00000040407","Akap9","5730481H23Rik|AKAP-9|AKAP450|AW545847|C79026|G1-448-15|PRKA9|mKIAA0803|mei2-5|repro12","A kinase (PRKA) anchor protein (yotiao) 9","protein-coding"]
[5226,"chr3",95105934,95110086,"+",0,"NA","Intergenic","Intergenic",-1080,"NM_008847",18720,"Mm.296409","NM_008847","ENSMUSG00000028126","Pip5k1a","PI4P5K-I[a]|PIP5K1-alpha|PIP5KIalpha|Pipk5a","phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha","protein-coding"]
[4127,"chr19",11817826,11819850,"+",0,"NA","5' UTR (NM_011502, exon 1 of 11)","5' UTR (NM_011502, exon 1 of 11)",565,"NM_001286543",20908,"Mm.272264","NM_011502","ENSMUSG00000041488","Stx3","Syn-3","syntaxin 3","protein-coding"]
[8167,"chr8",117453006,117455736,"+",0,"NA","intron (NM_001163262, intron 17 of 20)","MLT1J|LTR|ERVL-MaLR",1348,"NR_106045",102466801,null,"NR_106045","ENSMUSG00000099062","Mir7077","Gm27774|mmu-mir-7077","microRNA 7077","ncRNA"]
[2408,"chr14",32159320,32160527,"+",0,"NA","promoter-TSS (NM_001033988)","promoter-TSS (NM_001033988)",36,"NM_001033988",27057,"Mm.371598","NM_019744","ENSMUSG00000056234","Ncoa4","ARA70|Rfg","nuclear receptor coactivator 4","protein-coding"]
[3520,"chr17",35076787,35078244,"+",0,"NA","intron (NM_027366, intron 1 of 2)","intron (NM_027366, intron 1 of 2)",573,"NM_027366",70274,"Mm.250491","NM_027366","ENSMUSG00000013766","Ly6g6e","2310011I02Rik|G6e","lymphocyte antigen 6 complex, locus G6E","protein-coding"]
[2028,"chr13",21177784,21180887,"+",0,"NA","promoter-TSS (NM_009054)","promoter-TSS (NM_009054)",-596,"NM_009054",19720,"Mm.314056","NM_009054","ENSMUSG00000021326","Trim27","AW538890|Gm19403|Rfp","tripartite motif-containing 27","protein-coding"]
[6156,"chr5",35893478,35894319,"+",0,"NA","intron (NM_027373, intron 1 of 16)","intron (NM_027373, intron 1 of 16)",579,"NM_027373",70292,"Mm.125167","NM_027373","ENSMUSG00000029094","Afap1","2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018","actin filament associated protein 1","protein-coding"]
[1933,"chr12",101027134,101029588,"+",0,"NA","intron (NM_026681, intron 1 of 29)","intron (NM_026681, intron 1 of 29)",622,"NM_026681",68339,"Mm.156217","NM_026681","ENSMUSG00000021182","Ccdc88c","0610010D24Rik|AV000935|AW324073|Daple|mKIAA1509","coiled-coil domain containing 88C","protein-coding"]
[2022,"chr13",17694421,17696254,"+",0,"NA","promoter-TSS (NM_025479)","promoter-TSS (NM_025479)",-76,"NM_025479",66308,"Mm.291109","NM_025479","ENSMUSG00000012429","Mplkip","2810021B07Rik|C330007M08Rik|Ttdn1","M-phase specific PLK1 intereacting protein","protein-coding"]
[4643,"chr2",104815567,104817558,"+",0,"NA","intron (NM_001123327, intron 1 of 11)","CpG",134,"NM_001123327",99003,"Mm.274314","NM_001123327","ENSMUSG00000074994","Qser1","4732486I23Rik|AI502974","glutamine and serine rich 1","protein-coding"]
[414,"chr1",171280739,171282140,"+",0,"NA","promoter-TSS (NM_008911)","promoter-TSS (NM_008911)",-253,"NM_008911",19044,"Mm.266888","NM_008911","ENSMUSG00000062729","Ppox","Ppo","protoporphyrinogen oxidase","protein-coding"]
[8074,"chr8",104247810,104248501,"+",0,"NA","intron (NR_045642, intron 1 of 8)","intron (NR_045642, intron 1 of 8)",403,"NR_045642",57813,"Mm.183110","NM_021028","ENSMUSG00000035824","Tk2","AU024611|mt-TK","thymidine kinase 2, mitochondrial","protein-coding"]
[4385,"chr2",25545574,25546925,"+",0,"NA","intron (NM_009422, intron 1 of 10)","B1_Mur4|SINE|Alu",691,"NM_001290413",22030,"Mm.3399","NM_009422","ENSMUSG00000026942","Traf2","AI325259","TNF receptor-associated factor 2","protein-coding"]
[7400,"chr7",80801730,80804510,"+",0,"NA","intron (NM_016721, intron 1 of 37)","CpG",211,"NM_016721",29875,"Mm.207619","NM_016721","ENSMUSG00000030536","Iqgap1","AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051","IQ motif containing GTPase activating protein 1","protein-coding"]
[5665,"chr4",108847560,108848491,"+",0,"NA","exon (NM_029571, exon 1 of 1)","exon (NM_029571, exon 1 of 1)",168,"NM_029571",100087,"Mm.440007","NM_029571","ENSMUSG00000073775","Kti12","1110001A12Rik|AI326810|AU014758","KTI12 homolog, chromatin associated (S. cerevisiae)","protein-coding"]
[4581,"chr2",83644009,83645162,"+",0,"NA","promoter-TSS (NM_026934)","promoter-TSS (NM_026934)",7,"NM_026934",69082,"Mm.27804","NM_026934","ENSMUSG00000027091","Zc3h15","1700006A17Rik|1810012H02Rik|2610312B22Rik|FM22|Ierepo4","zinc finger CCCH-type containing 15","protein-coding"]
[4219,"chr19",41932732,41933778,"+",0,"NA","promoter-TSS (NM_025644)","promoter-TSS (NM_025644)",59,"NM_001164561",66583,"Mm.289086","NM_025644","ENSMUSG00000034321","Exosc1","2610035C18Rik|2610104C07Rik|2610312F07Rik|AI447561","exosome component 1","protein-coding"]
[8753,"chr9",124312202,124312961,"+",0,"NA","5' UTR (NM_001243119, exon 1 of 4)","5' UTR (NM_001243119, exon 1 of 4)",113,"NM_001243118",630836,"Mm.458553","NM_001243117","ENSMUSG00000074829","2010315B03Rik","BC029716","RIKEN cDNA 2010315B03 gene","protein-coding"]
[1566,"chr11",106500359,106502137,"+",0,"NA","TTS (NR_030703)","TTS (NR_030703)",257,"NR_030703",100216537,null,"NR_030703","ENSMUSG00000065126","Snord104","-","small nucleolar RNA, C/D box 104","snoRNA"]
[3737,"chr17",87281518,87284869,"+",0,"NA","promoter-TSS (NR_015506)","promoter-TSS (NR_015506)",307,"NM_028639",225049,"Mm.77396","NM_028639","ENSMUSG00000036918","Ttc7","1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea","tetratricopeptide repeat domain 7","protein-coding"]
[4421,"chr2",29802807,29803462,"+",0,"NA","intron (NM_011989, intron 1 of 12)","intron (NM_011989, intron 1 of 12)",454,"NM_011989",26569,"Mm.330113","NM_011989","ENSMUSG00000059316","Slc27a4","BB144259|FATP4","solute carrier family 27 (fatty acid transporter), member 4","protein-coding"]
[4303,"chr19",60811631,60812128,"+",0,"NA","intron (NM_026437, intron 1 of 8)","CpG",309,"NM_001167829",67894,"Mm.26148","NM_026437","ENSMUSG00000024993","Fam45a","1810055E12Rik","family with sequence similarity 45, member A","protein-coding"]
[267,"chr1",118321482,118322981,"+",0,"NA","intron (NM_026472, intron 1 of 6)","intron (NM_026472, intron 1 of 6)",388,"NM_026472",67949,"Mm.280311","NM_026472","ENSMUSG00000026377","Nifk","AI852665|C130020J04Rik|Mki67ip","nucleolar protein interacting with the FHA domain of MKI67","protein-coding"]
[4561,"chr2",73891989,73893690,"+",0,"NA","promoter-TSS (NM_001284373)","promoter-TSS (NM_001284373)",-200,"NM_001284370",11909,"Mm.209903","NM_009715","ENSMUSG00000027104","Atf2","Atf-2|CRE-BP|Creb2|D130078H02Rik|D18875|Tg(Gzma-Klra1)7Wum|mXBP","activating transcription factor 2","protein-coding"]
[2724,"chr15",58140983,58141803,"+",0,"NA","promoter-TSS (NM_029734)","promoter-TSS (NM_029734)",-43,"NM_029734",76773,"Mm.26771","NM_029734","ENSMUSG00000022359","Wdyhv1","2410187C16Rik|AU014961|AW550036|Ntaq1","WDYHV motif containing 1","protein-coding"]
[9,"chr1",9699658,9701186,"+",0,"NA","promoter-TSS (NM_001290397)","promoter-TSS (NM_001290397)",-213,"NM_008651",17864,"Mm.479","NM_008651","ENSMUSG00000025912","Mybl1","A-myb|G1-419-6|repro9","myeloblastosis oncogene-like 1","protein-coding"]
[6417,"chr5",122820971,122821639,"+",0,"NA","promoter-TSS (NM_021505)","promoter-TSS (NM_021505)",37,"NM_021505",59008,"Mm.332667","NM_021505","ENSMUSG00000029472","Anapc5","2510006G12Rik|AA408751|AA536819|AA986414|APC5|Anpc5","anaphase-promoting complex subunit 5","protein-coding"]
[5423,"chr4",3834761,3835550,"+",0,"NA","intron (NM_026147, intron 2 of 3)","CpG",445,"NM_026147",67427,"Mm.21938","NM_026147",null,"Rps20","4632426K06Rik|Dsk4","ribosomal protein S20","protein-coding"]
[5361,"chr3",130728648,130730807,"+",0,"NA","intron (NM_001199350, intron 1 of 4)","intron (NM_001199350, intron 1 of 4)",602,"NM_001199350",619547,"Mm.391636","NM_001199350",null,"Rpl34-ps1","EG619547|ENSMUSG00000068396|Gm10239","ribosomal protein L34, pseudogene 1","protein-coding"]
[1360,"chr11",84512968,84514044,"+",0,"NA","promoter-TSS (NM_019816)","promoter-TSS (NM_019816)",-5,"NM_019816",56321,"Mm.257482","NM_019816","ENSMUSG00000018697","Aatf","4933415H02Rik|5830465M17Rik|Che-1|Trb","apoptosis antagonizing transcription factor","protein-coding"]
[5891,"chr4",135855231,135857092,"+",0,"NA","promoter-TSS (NM_001284196)","promoter-TSS (NM_001284196)",90,"NM_010178",14105,"Mm.10229","NM_010178","ENSMUSG00000028676","Srsf10","FUSIP2|Fusip1|NSSR1|NSSR2|Nssr|SRrp40|Sfrs13a|Srsf13a|TASR|TASR1|TASR2","serine/arginine-rich splicing factor 10","protein-coding"]
[6217,"chr5",69591743,69592294,"+",0,"NA","intron (NM_001038015, intron 1 of 6)","CpG",267,"NM_001038015",67980,"Mm.33830","NM_027681","ENSMUSG00000029209","Gnpda2","4921523I18Rik|4933412A11Rik|BB189630|GNPDA|Gnp2|Sb52|mKIAA4008","glucosamine-6-phosphate deaminase 2","protein-coding"]
[2198,"chr13",67173266,67173448,"+",0,"NA","intron (NM_001013769, intron 1 of 3)","intron (NM_001013769, intron 1 of 3)",175,"NM_001013769",380855,"Mm.284988","NM_001013769","ENSMUSG00000058900","Rsl1","rslcan-9","regulator of sex limited protein 1","protein-coding"]
[2288,"chr13",100551544,100553503,"+",0,"NA","promoter-TSS (NM_008756)","promoter-TSS (NM_008756)",-25,"NM_008756",18260,"Mm.4807","NM_008756","ENSMUSG00000021638","Ocln","AI503564|Ocl","occludin","protein-coding"]
[2954,"chr15",100598499,100600424,"+",0,"NA","intron (NM_001304965, intron 1 of 10)","CpG",523,"NM_001304965",19009,"Mm.28825","NM_010127",null,"Pou6f1","2310038G18Rik|C79593|Emb|cns-1","POU domain, class 6, transcription factor 1","protein-coding"]
[842,"chr10",98913478,98916229,"+",0,"NA","promoter-TSS (NM_026482)","promoter-TSS (NM_026482)",-299,"NM_026482",67972,"Mm.166944","NM_026482","ENSMUSG00000019943","Atp2b1","2810442I22Rik|E130111D10Rik|Pmca1","ATPase, Ca++ transporting, plasma membrane 1","protein-coding"]
[8199,"chr8",122566946,122568358,"+",0,"NA","promoter-TSS (NM_026014)","promoter-TSS (NM_026014)",-363,"NM_026014",67177,"Mm.21873","NM_026014","ENSMUSG00000006585","Cdt1","2610318F11Rik|AW545653|C76791|Ris2","chromatin licensing and DNA replication factor 1","protein-coding"]
[6557,"chr5",140331478,140333930,"+",0,"NA","promoter-TSS (NM_026510)","promoter-TSS (NM_026510)",782,"NM_008637",17766,"Mm.118846","NM_008637","ENSMUSG00000036639","Nudt1","Mth1","nudix (nucleoside diphosphate linked moiety X)-type motif 1","protein-coding"]
[4814,"chr2",147012001,147014267,"+",0,"NA","promoter-TSS (NM_011917)","promoter-TSS (NM_011917)",74,"NM_011917",24128,"Mm.3065","NM_011917","ENSMUSG00000027433","Xrn2","-","5'-3' exoribonuclease 2","protein-coding"]
[6334,"chr5",110839264,110840642,"+",0,"NA","promoter-TSS (NM_153571)","promoter-TSS (NM_153571)",-64,"NM_016681",50883,"Mm.279308","NM_016681","ENSMUSG00000029521","Chek2","CHK2|Cds1|HUCDS1|Rad53","checkpoint kinase 2","protein-coding"]
[7048,"chr7",4738898,4741179,"+",0,"NA","promoter-TSS (NM_001115018)","promoter-TSS (NM_001115018)",-89,"NM_146177",232811,"Mm.247844","NM_146177","ENSMUSG00000059851","Suv420h2","BC024816|KMT5C|Suv4-20h2","suppressor of variegation 4-20 homolog 2 (Drosophila)","protein-coding"]
[7619,"chr7",127558623,127563864,"+",0,"NA","promoter-TSS (NM_001304267)","promoter-TSS (NM_001304267)",20,"NM_001304267",105180375,"Mm.428042","NM_001304267","ENSMUSG00000106715","Tmem265","-","transmembrane protein 265","protein-coding"]
[8346,"chr9",42263621,42265882,"+",0,"NA","promoter-TSS (NM_172769)","promoter-TSS (NM_172769)",-451,"NM_172769",235293,"Mm.32700","NM_172769","ENSMUSG00000032018","Sc5d","A830037K02|A830073K23Rik|Sc5dl","sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)","protein-coding"]
[8610,"chr9",104126904,104128173,"+",0,"NA","promoter-TSS (NM_145700)","promoter-TSS (NM_145700)",-895,"NM_145700",252837,"Mm.269254","NM_145700","ENSMUSG00000079355","Ackr4","A630091E18Rik|CCBP2|CCR11|CCX-CKR|CCX-CKR1|Ccrl1|Cmkbrl1|PPR1|VSHK1","atypical chemokine receptor 4","protein-coding"]
[6611,"chr5",149635579,149636685,"+",0,"NA","5' UTR (NM_013559, exon 1 of 18)","5' UTR (NM_013559, exon 1 of 18)",183,"NM_013559",15505,"Mm.270681","NM_013559","ENSMUSG00000029657","Hsph1","105kDa|AI790491|Hsp105|Hsp110|hsp-E7I|hsp110/105","heat shock 105kDa/110kDa protein 1","protein-coding"]
[4277,"chr19",53037914,53042099,"+",0,"NA","Intergenic","B2_Mm2|SINE|B2",-1352,"NM_133216",170750,"Mm.99776","NM_133216","ENSMUSG00000025027","Xpnpep1","D230045I08Rik|sAMP","X-prolyl aminopeptidase (aminopeptidase P) 1, soluble","protein-coding"]
[4075,"chr19",6974042,6976878,"+",0,"NA","exon (NM_008889, exon 1 of 4)","exon (NM_008889, exon 1 of 4)",412,"NM_008889",18938,"Mm.140","NM_008889","ENSMUSG00000056612","Ppp1r14b","AOM172|PHI-1|PLCB3N|Png","protein phosphatase 1, regulatory (inhibitor) subunit 14B","protein-coding"]
[8175,"chr8",119699298,119700619,"+",0,"NA","promoter-TSS (NM_026922)","promoter-TSS (NM_026922)",-51,"NM_026922",69047,"Mm.46251","NM_026922","ENSMUSG00000034112","Atp2c2","1810010G06Rik|Spca2|mKIAA0703","ATPase, Ca++ transporting, type 2C, member 2","protein-coding"]
[4665,"chr2",114174750,114175292,"+",0,"NA","intron (NM_001290788, intron 1 of 33)","intron (NM_001290788, intron 1 of 33)",318,"NM_009702",11834,"Mm.2545","NM_009702","ENSMUSG00000040383","Aqr","AW495846|mKIAA0560","aquarius","protein-coding"]
[4270,"chr19",47089658,47091446,"+",0,"NA","promoter-TSS (NM_023211)","promoter-TSS (NM_023211)",73,"NM_023211",66477,"Mm.29722","NM_023211","ENSMUSG00000071528","Usmg5","2010301L15Rik","upregulated during skeletal muscle growth 5","protein-coding"]
[1706,"chr12",3307536,3311554,"+",0,"NA","5' UTR (NM_016676, exon 1 of 6)","5' UTR (NM_016676, exon 1 of 6)",424,"NM_016676",19325,"Mm.378993","NM_016676","ENSMUSG00000020671","Rab10","AW107754","RAB10, member RAS oncogene family","protein-coding"]
[8359,"chr9",44361150,44361938,"+",0,"NA","exon (NM_027889, exon 1 of 16)","exon (NM_027889, exon 1 of 16)",126,"NM_027889",71732,"Mm.295013","NM_027889","ENSMUSG00000032127","Vps11","1200011A11Rik","vacuolar protein sorting 11 (yeast)","protein-coding"]
[1147,"chr11",58977668,58981304,"+",0,"NA","intron (NM_001290988, intron 1 of 6)","intron (NM_001290988, intron 1 of 6)",1393,"NM_053168",94091,"Mm.248049","NM_053168","ENSMUSG00000020455","Trim11","-","tripartite motif-containing 11","protein-coding"]
[7425,"chr7",88277281,88278598,"+",0,"NA","promoter-TSS (NM_009982)","promoter-TSS (NM_009982)",-146,"NM_009982",13032,"Mm.89295","NM_009982","ENSMUSG00000030560","Ctsc","AI047818|CatC|DPP1|DPPI","cathepsin C","protein-coding"]
[7383,"chr7",79809471,79811057,"+",0,"NA","promoter-TSS (NM_008589)","promoter-TSS (NM_008589)",-463,"NM_008589",17293,"Mm.31472","NM_008589","ENSMUSG00000030543","Mesp2","bHLHc6","mesoderm posterior 2","protein-coding"]
[1747,"chr12",24975169,24975537,"+",0,"NA","intron (NM_001081378, intron 1 of 31)","intron (NM_001081378, intron 1 of 31)",421,"NM_001081378",77480,"Mm.250641","NM_001081378","ENSMUSG00000036333","Kidins220","3110039L19Rik|AI194387|AI316525|C330002I19Rik|mKIAA1250","kinase D-interacting substrate 220","protein-coding"]
[1799,"chr12",59060453,59061711,"+",0,"NA","intron (NM_001306218, intron 1 of 6)","CpG",390,"NM_001306218",78232,"Mm.290070","NM_030057","ENSMUSG00000020993","Trappc6b","5830498C14Rik|C79212","trafficking protein particle complex 6B","protein-coding"]
[3716,"chr17",80205821,80207873,"+",0,"NA","intron (NR_036615, intron 1 of 8)","CpG",458,"NM_001195486",225027,"Mm.292016","NM_146083","ENSMUSG00000024097","Srsf7","35kDa|9430065L19Rik|9G8|NX-96|Sfrs7","serine/arginine-rich splicing factor 7","protein-coding"]
[7307,"chr7",45433714,45435566,"+",0,"NA","promoter-TSS (NM_030678)","promoter-TSS (NM_030678)",-176,"NM_011304",20174,"Mm.34410","NM_011304","ENSMUSG00000003868","Ruvbl2","mp47|p47","RuvB-like protein 2","protein-coding"]
[866,"chr10",116949764,116950384,"+",0,"NA","promoter-TSS (NR_038026)","promoter-TSS (NR_038026)",306,"NM_001003950",216363,"Mm.336394","NM_001003950","ENSMUSG00000064181","Rab3ip","B230311A06|Gtpat12|Rabin3","RAB3A interacting protein","protein-coding"]
[5118,"chr3",81932550,81933035,"+",0,"NA","intron (NM_177662, intron 1 of 7)","intron (NM_177662, intron 1 of 7)",176,"NM_177662",229445,"Mm.254642","NM_177662","ENSMUSG00000028015","Ctso","A330105D01Rik|A430056C07|AI118514","cathepsin O","protein-coding"]
[4734,"chr2",125858188,125859499,"+",0,"NA","promoter-TSS (NM_175154)","promoter-TSS (NM_175154)",239,"NM_009939",12848,"Mm.3596","NM_009939","ENSMUSG00000027206","Cops2","AI315723|C85265|Csn2|Sgn2|TRIP-15|Trip15","COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)","protein-coding"]
[6640,"chr6",13676997,13677860,"+",0,"NA","intron (NM_175312, intron 1 of 4)","intron (NM_175312, intron 1 of 4)",538,"NM_175312",101148,"Mm.354863","NM_175312","ENSMUSG00000042742","B630005N14Rik","AI666701","RIKEN cDNA B630005N14 gene","protein-coding"]
[6075,"chr5",23783012,23783595,"+",0,"NA","intron (NM_001289780, intron 1 of 16)","CpG",408,"NM_001289780",78697,"Mm.58660","NM_178403","ENSMUSG00000057541","Pus7","C330017I15Rik","pseudouridylate synthase 7 homolog (S. cerevisiae)","protein-coding"]
[2903,"chr15",93397724,93398990,"+",0,"NA","promoter-TSS (NM_175363)","promoter-TSS (NM_175363)",7,"NM_175363",223828,"Mm.74208","NM_146062","ENSMUSG00000036167","Pphln1","CR|HSPC206|HSPC232","periphilin 1","protein-coding"]
[8951,"chrX",152015924,152016902,"+",0,"NA","promoter-TSS (NM_019710)","promoter-TSS (NM_019710)",-15,"NM_019710",24061,"Mm.482095","NM_019710","ENSMUSG00000041133","Smc1a","5830426I24Rik|SMC-1A|Sb1.8|Smc1|Smc1alpha|Smc1l1|Smcb|mKIAA0178","structural maintenance of chromosomes 1A","protein-coding"]
[5096,"chr3",62506558,62506968,"+",0,"NA","exon (NM_028136, exon 1 of 25)","exon (NM_028136, exon 1 of 25)",225,"NM_028136",72162,"Mm.224233","NM_028136","ENSMUSG00000027770","Dhx36","2810407E23Rik|AI452301|AU022184|Ddx36|mKIAA1488","DEAH (Asp-Glu-Ala-His) box polypeptide 36","protein-coding"]
[6129,"chr5",32785036,32786330,"+",0,"NA","promoter-TSS (NM_177298)","promoter-TSS (NM_177298)",-57,"NM_177298",320951,"Mm.273765","NM_177298","ENSMUSG00000023452","Pisd","9030221M09Rik","phosphatidylserine decarboxylase","protein-coding"]
[3968,"chr18",81993336,81994768,"+",0,"NA","Intergenic","Intergenic",-1972,"NR_039589",100628596,null,"NR_039589","ENSMUSG00000093036","Mir5127","mmu-mir-5127|mu-mir-5127","microRNA 5127","ncRNA"]
[2544,"chr14",65836994,65838306,"+",0,"NA","intron (NM_145944, intron 1 of 8)","CpG",348,"NM_145944",67179,"Mm.214576","NM_145944","ENSMUSG00000022035","Ccdc25","2610528H13Rik|NSrp70","coiled-coil domain containing 25","protein-coding"]
[1379,"chr11",87085435,87087219,"+",0,"NA","exon (NM_024262, exon 1 of 4)","exon (NM_024262, exon 1 of 4)",450,"NM_024262",74133,"Mm.23257","NM_024262","ENSMUSG00000020495","Smg8","1200011M11Rik","smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)","protein-coding"]
[6420,"chr5",122987961,122990183,"+",0,"NA","promoter-TSS (NM_001003953)","promoter-TSS (NM_001003953)",27,"NM_001003953",30841,"Mm.86406","NM_013910","ENSMUSG00000029475","Kdm2b","Cxxc2|Fbl10|Fbxl10|Jhdm1b|PCCX2","lysine (K)-specific demethylase 2B","protein-coding"]
[2496,"chr14",55721493,55725864,"+",0,"NA","Intergenic","(CA)n|Simple_repeat|Simple_repeat",-1502,"NM_019519",56187,"Mm.87216","NM_019519","ENSMUSG00000040472","Rabggta","gm","Rab geranylgeranyl transferase, a subunit","protein-coding"]
[4511,"chr2",49451056,49452638,"+",0,"NA","exon (NM_172663, exon 1 of 14)","exon (NM_172663, exon 1 of 14)",361,"NM_172663",227867,"Mm.29167","NM_172663","ENSMUSG00000069495","Epc2","5830499L14|D2Ertd694e","enhancer of polycomb homolog 2 (Drosophila)","protein-coding"]
[1167,"chr11",60416522,60418377,"+",0,"NA","promoter-TSS (NM_145427)","promoter-TSS (NM_145427)",304,"NM_025757",66771,"Mm.29950","NM_025757","ENSMUSG00000018415","Gid4","4933439F18Rik","GID complex subunit 4, VID24 homolog (S. cerevisiae)","protein-coding"]
[5490,"chr4",40238146,40240374,"+",0,"NA","intron (NM_172689, intron 1 of 17)","intron (NM_172689, intron 1 of 17)",565,"NM_172689",230073,"Mm.86382","NM_172689",null,"Ddx58","6430573D20Rik|C330021E21|RIG-I|RLR-1","DEAD (Asp-Glu-Ala-Asp) box polypeptide 58","protein-coding"]
[2489,"chr14",55603482,55604857,"+",0,"NA","promoter-TSS (NM_001159418)","promoter-TSS (NM_001159418)",184,"NM_001159417",16391,"Mm.2032","NM_008394","ENSMUSG00000002325","Irf9","Irf-9|Isgf3g|p48","interferon regulatory factor 9","protein-coding"]
[2955,"chr15",100614445,100616563,"+",0,"NA","promoter-TSS (NM_011873)","promoter-TSS (NM_011873)",-158,"NM_011873",23994,"Mm.486175","NM_011873","ENSMUSG00000000346","Dazap2","AI314727|Brbp|Gcap28|Prtb|gt6-12|mKIAA0058","DAZ associated protein 2","protein-coding"]
[4210,"chr19",40993666,40994167,"+",0,"NA","intron (NM_008528, intron 1 of 16)","intron (NM_008528, intron 1 of 16)",619,"NM_008528",17060,"Mm.9749","NM_008528","ENSMUSG00000061132","Blnk","BASH|Bca|Ly-57|Ly57|Lyw-57|SLP-65","B cell linker","protein-coding"]
[935,"chr10",128525034,128526801,"+",0,"NA","promoter-TSS (NM_011843)","promoter-TSS (NM_011843)",-58,"NM_011843",23943,"Mm.66056","NM_011843","ENSMUSG00000025366","Esyt1","Fam62a|Mbc2|vp115","extended synaptotagmin-like protein 1","protein-coding"]
[1300,"chr11",76945169,76946372,"+",0,"NA","5' UTR (NM_178645, exon 1 of 12)","5' UTR (NM_178645, exon 1 of 12)",114,"NM_178645",104184,"Mm.399785","NM_178645","ENSMUSG00000020840","Blmh","AI035728|Bh|Bmh","bleomycin hydrolase","protein-coding"]
[204,"chr1",86063798,86065358,"+",0,"NA","promoter-TSS (NM_027357)","promoter-TSS (NM_027357)",-41,"NM_027357",70247,"Mm.280013","NM_027357","ENSMUSG00000026229","Psmd1","2410026J11Rik|P112|S1","proteasome (prosome, macropain) 26S subunit, non-ATPase, 1","protein-coding"]
[814,"chr10",88147045,88147360,"+",0,"NA","promoter-TSS (NM_029249)","promoter-TSS (NM_029249)",131,"NM_028334",69736,"Mm.222184","NM_027191","ENSMUSG00000035351","Nup37","2410003L22Rik|2810039M17Rik","nucleoporin 37","protein-coding"]
[2492,"chr14",55651380,55652018,"+",0,"NA","exon (NM_027673, exon 3 of 4)","exon (NM_027673, exon 3 of 4)",1515,"NM_001253889",71099,"Mm.171300","NM_027673","ENSMUSG00000007591","Tssk4","1700020B19Rik|4933424F08Rik|TSK-4|TSSK-4","testis-specific serine kinase 4","protein-coding"]
[8585,"chr9",98563167,98564222,"+",0,"NA","promoter-TSS (NM_015827)","promoter-TSS (NM_015827)",-37,"NM_015827",50797,"Mm.400464","NM_015827","ENSMUSG00000032458","Copb2","AI256832","coatomer protein complex, subunit beta 2 (beta prime)","protein-coding"]
[4910,"chr2",163016792,163018180,"+",0,"NA","promoter-TSS (NM_172150)","promoter-TSS (NM_172150)",14,"NM_172150",245866,"Mm.34034","NM_172150","ENSMUSG00000017858","Ift52","BC037708|NGD5","intraflagellar transport 52","protein-coding"]
[4846,"chr2",153161122,153162753,"+",0,"NA","intron (NM_133847, intron 1 of 17)","intron (NM_133847, intron 1 of 17)",636,"NM_133847",99237,"Mm.330674","NM_133847","ENSMUSG00000068040","Tm9sf4","AA986553|AU045326|B930079E06|mKIAA0255","transmembrane 9 superfamily protein member 4","protein-coding"]
[253,"chr1",105663009,105664669,"+",0,"NA","promoter-TSS (NM_013784)","promoter-TSS (NM_013784)",-22,"NM_029349",227446,"Mm.337339","NM_029349","ENSMUSG00000026319","2310035C23Rik","6430401N10|Kiaa1468|mKIAA1468","RIKEN cDNA 2310035C23 gene","protein-coding"]
[5928,"chr4",139573427,139579173,"+",0,"NA","intron (NM_001205173, intron 1 of 8)","intron (NM_001205173, intron 1 of 8)",1580,"NM_001205173",212632,"Mm.30464","NM_183148","ENSMUSG00000041025","Iffo2","C79267","intermediate filament family orphan 2","protein-coding"]
[7223,"chr7",30193535,30197203,"+",0,"NA","promoter-TSS (NM_009795)","promoter-TSS (NM_009795)",-321,"NM_009795",12336,"Mm.439782","NM_009795","ENSMUSG00000001794","Capns1","Capa-4|Capa4|Capn4|D7Ertd146e","calpain, small subunit 1","protein-coding"]
[5009,"chr3",8667575,8667905,"+",0,"NA","promoter-TSS (NM_010423)","promoter-TSS (NM_010423)",-702,"NM_010423",15213,"Mm.29581","NM_010423","ENSMUSG00000040289","Hey1","AI316788|AI414254|CHF2|HRT1|Herp2|Hesr1|bHLHb31|hesr-1","hairy/enhancer-of-split related with YRPW motif 1","protein-coding"]
[6377,"chr5",117286922,117287432,"+",0,"NA","intron (NM_018858, intron 1 of 3)","intron (NM_018858, intron 1 of 3)",387,"NM_018858",23980,"Mm.195898","NM_018858","ENSMUSG00000032959","Pebp1","HCNP|Pbp|Pbp1|Pbpr|Rkip","phosphatidylethanolamine binding protein 1","protein-coding"]
[2805,"chr15",77969670,77971568,"+",0,"NA","intron (NM_018749, intron 1 of 14)","CpG",205,"NM_018749",55944,"Mm.3955","NM_018749","ENSMUSG00000016554","Eif3d","66/67kDa|AA407891|Eif3s7|eIF3p66","eukaryotic translation initiation factor 3, subunit D","protein-coding"]
[938,"chr10",128673470,128674647,"+",0,"NA","promoter-TSS (NM_173733)","promoter-TSS (NM_173733)",-140,"NM_173733",211389,"Mm.23352","NM_173733","ENSMUSG00000049858","Suox","SO","sulfite oxidase","protein-coding"]
[6466,"chr5",129942343,129942768,"+",0,"NA","intron (NM_001001327, intron 1 of 1)","CpG",446,"NM_027121",69568,"Mm.288718","NM_027121","ENSMUSG00000066735","Vkorc1l1","2310024K08Rik","vitamin K epoxide reductase complex, subunit 1-like 1","protein-coding"]
[6142,"chr5",34168834,34170068,"+",0,"NA","promoter-TSS (NM_146159)","promoter-TSS (NM_146159)",-27,"NM_146159",231123,"Mm.319286","NM_146159","ENSMUSG00000079555","Haus3","D4S43h|D5H4S43|D5H4S43E","HAUS augmin-like complex, subunit 3","protein-coding"]
[7825,"chr8",35495147,35496201,"+",0,"NA","promoter-TSS (NM_026067)","promoter-TSS (NM_026067)",-141,"NM_026067",67276,"Mm.207534","NM_026067","ENSMUSG00000031527","Eri1","3'hexo|3110010F15Rik|Thex1|eri-1","exoribonuclease 1","protein-coding"]
[5199,"chr3",90525663,90529982,"+",0,"NA","exon (NM_001163525, exon 3 of 4)","exon (NM_001163525, exon 3 of 4)",973,"NM_001163526",66166,"Mm.24006","NM_025393","ENSMUSG00000042306","S100a14","1110013O05Rik|S100a15|S114","S100 calcium binding protein A14","protein-coding"]
[7289,"chr7",44661789,44665347,"+",0,"NA","intron (NM_001271540, intron 2 of 41)","intron (NM_001271540, intron 2 of 41)",1935,"NM_001271538",71960,"Mm.158289","NM_028021","ENSMUSG00000030739","Myh14","2400004E04Rik|II-C|NHMCII|NMHC II-C","myosin, heavy polypeptide 14","protein-coding"]
[8747,"chr9",123366985,123367487,"+",0,"NA","intron (NM_153168, intron 1 of 20)","intron (NM_153168, intron 1 of 20)",296,"NM_153168",102436,"Mm.276076","NM_153168","ENSMUSG00000035202","Lars2","AI035546|Kiaa0028|LEURS","leucyl-tRNA synthetase, mitochondrial","protein-coding"]
[6272,"chr5",96159961,96163515,"+",0,"NA","promoter-TSS (NM_178854)","promoter-TSS (NM_178854)",17,"NM_178854",231464,"Mm.28374","NM_144910","ENSMUSG00000034724","Cnot6l","4932442K20Rik","CCR4-NOT transcription complex, subunit 6-like","protein-coding"]
[3610,"chr17",47592760,47594681,"+",0,"NA","exon (NM_001081636, exon 3 of 7)","exon (NM_001081636, exon 3 of 7)",253,"NM_007632",12445,"Mm.27291","NM_007632","ENSMUSG00000034165","Ccnd3","9230106B05Rik|AA682053|AL024085|AW146355|C78795","cyclin D3","protein-coding"]
[3140,"chr16",33829402,33830976,"+",0,"NA","intron (NM_001145884, intron 1 of 14)","CpG",524,"NM_001145884",16419,"Mm.6424","NM_010580","ENSMUSG00000022817","Itgb5","AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5","integrin beta 5","protein-coding"]
[8182,"chr8",120488426,120489660,"+",0,"NA","5' UTR (NM_198671, exon 1 of 16)","5' UTR (NM_198671, exon 1 of 16)",177,"NM_198671",382034,"Mm.334856","NM_198671","ENSMUSG00000031822","Gse1","2210013I18Rik|mKIAA0182","genetic suppressor element 1","protein-coding"]
[2993,"chr16",4726102,4726845,"+",0,"NA","intron (NM_001136066, intron 1 of 5)","CpG",112,"NM_001136066",15369,"Mm.272866","NM_010443","ENSMUSG00000004070","Hmox2","HO-2|HO2","heme oxygenase 2","protein-coding"]
[8282,"chr9",21090312,21092820,"+",0,"NA","intron (NR_038081, intron 1 of 16)","intron (NR_038081, intron 1 of 16)",422,"NM_027911",71766,"Mm.196137","NM_027911","ENSMUSG00000010205","Raver1","1300006N24Rik|AA050359|mKIAA1978","ribonucleoprotein, PTB-binding 1","protein-coding"]
[7066,"chr7",7171401,7171808,"+",0,"NA","intron (NM_146179, intron 1 of 3)","intron (NM_146179, intron 1 of 3)",251,"NM_146179",232854,"Mm.184857","NM_146179","ENSMUSG00000034538","Zfp418","A230102I05Rik","zinc finger protein 418","protein-coding"]
[4450,"chr2",31469672,31471015,"+",0,"NA","promoter-TSS (NR_002687)","promoter-TSS (NR_002687)",35,"NR_002687",432466,"Mm.333323","NR_002687","ENSMUSG00000046687","Gm5424","EG432466","argininosuccinate synthase pseudogene","pseudo"]
[473,"chr1",182405987,182410021,"+",0,"NA","Intergenic","PB1D11|SINE|Alu",-1163,"NM_173378",209456,"Mm.287450","NM_173378","ENSMUSG00000026510","Trp53bp2","53BP2|AI746547|ASPP2|PPP1R13A|Tp53bp2|X98550","transformation related protein 53 binding protein 2","protein-coding"]
[2572,"chr14",73324992,73327627,"+",0,"NA","promoter-TSS (NM_009029)","promoter-TSS (NM_009029)",-518,"NM_009029",19645,"Mm.273862","NM_009029","ENSMUSG00000022105","Rb1","Rb|Rb-1|pRb","retinoblastoma 1","protein-coding"]
[4782,"chr2",131949084,131949359,"+",0,"NA","intron (NM_001278259, intron 3 of 4)","intron (NM_001278259, intron 3 of 4)",-1640,"NM_001278257",26434,"Mm.180750","NM_023043","ENSMUSG00000027338","Prnd","AI450264|Dpl|PrPLP|doppel","prion protein dublet","protein-coding"]
[6922,"chr6",118454447,118455730,"+",0,"NA","intron (NM_028335, intron 1 of 5)","intron (NM_028335, intron 1 of 5)",418,"NM_028335",72720,"Mm.212572","NM_028335","ENSMUSG00000030145","Zfp248","2810037F07Rik|E130106N01Rik","zinc finger protein 248","protein-coding"]
[1049,"chr11",32205024,32206179,"+",0,"NA","5' UTR (NM_030093, exon 1 of 5)","5' UTR (NM_030093, exon 1 of 5)",186,"NM_030093",78372,"Mm.29952","NM_030093","ENSMUSG00000040767","Snrnp25","3300001G02Rik|AL033324|C16ORF33","small nuclear ribonucleoprotein 25 (U11/U12)","protein-coding"]
[4544,"chr2",69789091,69791426,"+",0,"NA","promoter-TSS (NM_001077684)","promoter-TSS (NM_001077684)",521,"NM_028521",73373,"Mm.9621","NM_028521","ENSMUSG00000027088","Phospho2","1700048E23Rik|AI661517|AU021728|AV006103|Phos2","phosphatase, orphan 2","protein-coding"]
[4932,"chr2",165288576,165289105,"+",0,"NA","3' UTR (NM_207706, exon 22 of 22)","3' UTR (NM_207706, exon 22 of 22)",-1002,"NR_045544",228875,"Mm.21184","NM_144893","ENSMUSG00000017664","Slc35c2","C85957|CGI-15|D2Wsu58e|Ovcov1","solute carrier family 35, member C2","protein-coding"]
[4316,"chr2",4881530,4882964,"+",0,"NA","intron (NM_175400, intron 1 of 8)","CpG",683,"NM_175400",109079,"Mm.34329","NM_175400","ENSMUSG00000026662","Sephs1","1110046B24Rik|AA589574|AI505014|AW111620|SELD|SPS|SPS1","selenophosphate synthetase 1","protein-coding"]
[8907,"chrX",103492989,103494008,"+",0,"NA","promoter-TSS (NR_015508)","promoter-TSS (NR_015508)",-60,"NR_015508",70252,"Mm.380486","NR_015508","ENSMUSG00000097571","Jpx","2010000I03Rik|2510040I06Rik|Enox","Jpx transcript, Xist activator (non-protein coding)","ncRNA"]
[1408,"chr11",94320796,94322901,"+",0,"NA","promoter-TSS (NM_026313)","promoter-TSS (NM_026313)",63,"NM_026313",67684,"Mm.30927","NM_026313","ENSMUSG00000020863","Luc7l3","3300001P08Rik|Luc7a","LUC7-like 3 (S. cerevisiae)","protein-coding"]
[695,"chr10",75211481,75212685,"+",0,"NA","promoter-TSS (NM_001145826)","promoter-TSS (NM_001145826)",10,"NM_153406",74392,"Mm.27716","NM_153406","ENSMUSG00000033444","Specc1l","4930470P14Rik|4932439K10Rik|9530057A13Rik|AI317249|Cytsa|mKIAA0376","sperm antigen with calponin homology and coiled-coil domains 1-like","protein-coding"]
[5372,"chr3",135824929,135826882,"+",0,"NA","5' UTR (NM_001135150, exon 1 of 9)","5' UTR (NM_001135150, exon 1 of 9)",115,"NM_001135150",67547,"Mm.30239","NM_026228","ENSMUSG00000053897","Slc39a8","4933419D20Rik|AA986696|BIGM103|ZIP-8|Zip8","solute carrier family 39 (metal ion transporter), member 8","protein-coding"]
[1732,"chr12",16894152,16896990,"+",0,"NA","intron (NM_009072, intron 1 of 32)","intron (NM_009072, intron 1 of 32)",593,"NM_009072",19878,"Mm.276024","NM_009072","ENSMUSG00000020580","Rock2","B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619","Rho-associated coiled-coil containing protein kinase 2","protein-coding"]
[861,"chr10",115250293,115252958,"+",0,"NA","promoter-TSS (NM_025706)","promoter-TSS (NM_025706)",-132,"NM_025706",66687,"Mm.22252","NM_025706","ENSMUSG00000020130","Tbc1d15","4432405K22Rik|AU022358|AU023730|AW557774|Ly6dl|Rab7-GAP","TBC1 domain family, member 15","protein-coding"]
[6331,"chr5",110769578,110770613,"+",0,"NA","intron (NM_173066, intron 1 of 50)","CpG",622,"NM_029337",75560,"Mm.270487","NM_029337","ENSMUSG00000029505","Ep400","1700020J09Rik|AU023439|mDomino|mKIAA1498|p400","E1A binding protein p400","protein-coding"]
[5428,"chr4",5644243,5644584,"+",0,"NA","intron (NM_173426, intron 1 of 2)","CpG",234,"NM_173426",242297,"Mm.331470","NM_173426","ENSMUSG00000049119","Fam110b","1700012H17Rik|5031405P22|AW049855","family with sequence similarity 110, member B","protein-coding"]
[7200,"chr7",28807654,28813616,"+",0,"NA","promoter-TSS (NM_177301)","promoter-TSS (NM_177301)",-255,"NM_177301",15388,"Mm.9043","NM_177301","ENSMUSG00000015165","Hnrnpl","C79783|D830027H13Rik|Hnrpl","heterogeneous nuclear ribonucleoprotein L","protein-coding"]
[4153,"chr19",24172432,24176123,"+",0,"NA","promoter-TSS (NM_001198985)","promoter-TSS (NM_001198985)",-137,"NM_001198985",21873,"Mm.104744","NM_011597","ENSMUSG00000024812","Tjp2","ZO-2","tight junction protein 2","protein-coding"]
[2474,"chr14",54863525,54864600,"+",0,"NA","promoter-TSS (NM_001177705)","promoter-TSS (NM_001177705)",96,"NM_001177705",239099,"Mm.280994","NM_183174","ENSMUSG00000057156","Homez","mKIAA1443","homeodomain leucine zipper-encoding gene","protein-coding"]
[1438,"chr11",97029632,97030269,"+",0,"NA","promoter-TSS (NM_146027)","promoter-TSS (NM_146027)",-2,"NM_146027",217140,"Mm.46189","NM_146027","ENSMUSG00000020877","Scrn2","AV001119|D11Moh48|SES2","secernin 2","protein-coding"]
[4766,"chr2",130273779,130274799,"+",0,"NA","promoter-TSS (NM_024193)","promoter-TSS (NM_024193)",-123,"NM_024193",67134,"Mm.29363","NM_024193","ENSMUSG00000027405","Nop56","2310044F10Rik|Nol5a","NOP56 ribonucleoprotein","protein-coding"]
[7045,"chr7",4501170,4502750,"+",0,"NA","promoter-TSS (NM_029834)","promoter-TSS (NM_029834)",-280,"NM_029834",232807,"Mm.360391","NM_029834","ENSMUSG00000019254","Ppp1r12c","2410197A17Rik|AI839747|B430101M08|Mbs85","protein phosphatase 1, regulatory (inhibitor) subunit 12C","protein-coding"]
[6410,"chr5",122371622,122373106,"+",0,"NA","promoter-TSS (NM_026883)","promoter-TSS (NM_026883)",-144,"NM_024216",68080,"Mm.266328","NM_024216","ENSMUSG00000029464","Gpn3","A930018B01Rik|Atpbd1c|D5Ertd708e","GPN-loop GTPase 3","protein-coding"]
[7747,"chr8",4779193,4779496,"+",0,"NA","intron (NM_011369, intron 1 of 12)","CpG",190,"NM_011369",20419,"Mm.37801","NM_011369","ENSMUSG00000022322","Shcbp1","mPAL","Shc SH2-domain binding protein 1","protein-coding"]
[3763,"chr18",10609274,10610542,"+",0,"NA","intron (NM_001081222, intron 1 of 10)","CpG",444,"NM_001081222",77805,"Mm.210996","NM_144542","ENSMUSG00000024293","Esco1","A930014I12Rik","establishment of cohesion 1 homolog 1 (S. cerevisiae)","protein-coding"]
[4981,"chr2",180224320,180226145,"+",0,"NA","intron (NM_001081171, intron 1 of 78)","CpG",627,"NM_001081171",16776,"Mm.4339","NM_001081171","ENSMUSG00000015647","Lama5","AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533","laminin, alpha 5","protein-coding"]
[447,"chr1",179517124,179517993,"+",0,"NA","intron (NM_027188, intron 1 of 11)","intron (NM_027188, intron 1 of 11)",445,"NM_027188",69726,"Mm.222338","NM_027188",null,"Smyd3","2410008A19Rik|Zmynd1","SET and MYND domain containing 3","protein-coding"]
[3258,"chr16",93681593,93684420,"+",0,"NA","promoter-TSS (NM_173047)","promoter-TSS (NM_173047)",-213,"NM_173047",109857,"Mm.4512","NM_173047","ENSMUSG00000022947","Cbr3","1110001J05Rik|C81353","carbonyl reductase 3","protein-coding"]
[6881,"chr6",103509802,103513396,"+",0,"NA","intron (NM_007697, intron 1 of 26)","intron (NM_007697, intron 1 of 26)",723,"NM_007697",12661,"Mm.251288","NM_007697","ENSMUSG00000030077","Chl1","A530023M13Rik|AI465420|CALL|LICAM2","cell adhesion molecule with homology to L1CAM","protein-coding"]
[7180,"chr7",27731145,27732124,"+",0,"NA","5' UTR (NM_009560, exon 1 of 5)","5' UTR (NM_009560, exon 1 of 5)",225,"NM_009560",22718,"Mm.66913","NM_009560",null,"Zfp60","6330516O17Rik|AI426106|AI449354|Mfg-3|Mfg3","zinc finger protein 60","protein-coding"]
[5399,"chr3",145649084,145650566,"+",0,"NA","5' UTR (NM_010516, exon 1 of 5)","5' UTR (NM_010516, exon 1 of 5)",160,"NM_010516",16007,"Mm.1231","NM_010516","ENSMUSG00000028195","Cyr61","AI325051|CCN1|Igfbp10","cysteine rich protein 61","protein-coding"]
[4569,"chr2",75981856,75982259,"+",0,"NA","promoter-TSS (NM_030188)","promoter-TSS (NM_030188)",-90,"NM_030188",78802,"Mm.282339","NM_030188",null,"Ttc30a1","4930506L13Rik","tetratricopeptide repeat domain 30A1","protein-coding"]
[953,"chr11",3963556,3964683,"+",0,"NA","intron (NM_022889, intron 1 of 14)","intron (NM_022889, intron 1 of 14)",144,"NM_022889",64934,"Mm.28659","NM_022889","ENSMUSG00000020430","Pes1","-","pescadillo homolog 1, containing BRCT domain (zebrafish)","protein-coding"]
[5991,"chr4",151055606,151059570,"+",0,"NA","intron (NM_009498, intron 1 of 4)","CpG",365,"NM_009498",22319,"Mm.273930","NM_009498","ENSMUSG00000028955","Vamp3","D130027G05Rik|VAMP-3|ceb","vesicle-associated membrane protein 3","protein-coding"]
[6968,"chr6",125312051,125312273,"+",0,"NA","intron (NM_010736, intron 5 of 9)","intron (NM_010736, intron 5 of 9)",1708,"NM_010736",17000,"Mm.3122","NM_010736","ENSMUSG00000030339","Ltbr","AI256028|CD18|LTbetaR|Ltar|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFRrp|Tnfbr|Tnfrsf3","lymphotoxin B receptor","protein-coding"]
[7225,"chr7",30307837,30309325,"+",0,"NA","promoter-TSS (NM_198027)","promoter-TSS (NM_198027)",-172,"NM_198027",233065,"Mm.276277","NM_198027","ENSMUSG00000042831","Alkbh6","AI839550|Abh6|C130099A02","alkB, alkylation repair homolog 6 (E. coli)","protein-coding"]
[260,"chr1",106857035,106869161,"+",0,"NA","intron (NM_009257, intron 1 of 6)","B1F|SINE|Alu",1918,"NM_009257",20724,"Mm.268618","NM_009257","ENSMUSG00000067006","Serpinb5","1110036M19Rik|AI462524|AI646751|Maspin|PI-5|Spi7|ovalbumin","serine (or cysteine) peptidase inhibitor, clade B, member 5","protein-coding"]
[3080,"chr16",20516157,20517881,"+",0,"NA","promoter-TSS (NM_007889)","promoter-TSS (NM_007889)",-45,"NM_007889",13544,"Mm.247259","NM_007889","ENSMUSG00000003233","Dvl3","-","dishevelled 3, dsh homolog (Drosophila)","protein-coding"]
[6750,"chr6",53572534,53573623,"+",0,"NA","promoter-TSS (NM_172728)","promoter-TSS (NM_172728)",-296,"NM_172728",231991,"Mm.321138","NM_172728","ENSMUSG00000053007","Creb5","Crebpa|D430026C09Rik","cAMP responsive element binding protein 5","protein-coding"]
[8726,"chr9",120932593,120935729,"+",0,"NA","intron (NM_007614, intron 1 of 14)","CpG",583,"NM_001165902",12387,"Mm.291928","NM_007614","ENSMUSG00000006932","Ctnnb1","Bfc|Catnb|Mesc","catenin (cadherin associated protein), beta 1","protein-coding"]
[177,"chr1",75179612,75180201,"+",0,"NA","TTS (NR_109938)","TTS (NR_109938)",486,"NM_023732",74104,"Mm.28663","NM_023732","ENSMUSG00000026198","Abcb6","1200005B17Rik","ATP-binding cassette, sub-family B (MDR/TAP), member 6","protein-coding"]
[8035,"chr8",88646408,88651317,"+",0,"NA","intron (NM_145857, intron 1 of 12)","intron (NM_145857, intron 1 of 12)",1515,"NM_145857",257632,"Mm.222633","NM_145857","ENSMUSG00000055994","Nod2","ACUG|BLAU|CD|Card15|F830032C23Rik|IBD1|Nlrc2","nucleotide-binding oligomerization domain containing 2","protein-coding"]
[4345,"chr2",18047182,18048817,"+",0,"NA","exon (NM_028317, exon 1 of 1)","exon (NM_028317, exon 1 of 1)",450,"NM_028317",72668,"Mm.102183","NM_028317","ENSMUSG00000054074","Skida1","2810030E01Rik|5730507N06Rik|BB088113","SKI/DACH domain containing 1","protein-coding"]
[6601,"chr5",146962810,146963760,"+",0,"NA","5' UTR (NM_001256101, exon 2 of 5)","5' UTR (NM_001256101, exon 2 of 5)",512,"NM_001256101",76366,"Mm.486234","NM_029581","ENSMUSG00000016510","Mtif3","2810012L14Rik|AI414549","mitochondrial translational initiation factor 3","protein-coding"]
[493,"chr1",191317450,191318263,"+",0,"NA","intron (NM_025424, intron 1 of 3)","CpG",262,"NM_025424",66208,"Mm.46444","NM_025424","ENSMUSG00000037499","Nenf","1110060M21Rik|SCIRP10|Spuf","neuron derived neurotrophic factor","protein-coding"]
[3719,"chr17",80479253,80481250,"+",0,"NA","5' UTR (NM_009231, exon 1 of 22)","5' UTR (NM_009231, exon 1 of 22)",202,"NM_009231",20662,"Mm.60975","NM_009231","ENSMUSG00000024241","Sos1","4430401P03Rik|9630010N06|AI449023","son of sevenless homolog 1 (Drosophila)","protein-coding"]
[6543,"chr5",139216651,139217180,"+",0,"NA","intron (NM_024451, intron 2 of 22)","intron (NM_024451, intron 2 of 22)",1757,"NM_001256116",77053,"Mm.210845","NM_024451","ENSMUSG00000036817","Sun1","4632417G13Rik|5730434D03Rik|Unc84a|mKIAA0810","Sad1 and UNC84 domain containing 1","protein-coding"]
[5750,"chr4",121016291,121017655,"+",0,"NA","5' UTR (NM_133716, exon 1 of 10)","5' UTR (NM_133716, exon 1 of 10)",274,"NM_133716",69780,"Mm.271819","NM_133716","ENSMUSG00000032870","Smap2","1810031K02Rik|AA408614|Smap1l","small ArfGAP 2","protein-coding"]
[400,"chr1",167349643,167350810,"+",0,"NA","5' UTR (NM_019993, exon 1 of 11)","5' UTR (NM_019993, exon 1 of 11)",235,"NM_019993",56752,"Mm.292539","NM_019993","ENSMUSG00000026687","Aldh9a1","AA139417|Abaldh|ESTM40|TMABA-DH|Tmabadh","aldehyde dehydrogenase 9, subfamily A1","protein-coding"]
[5963,"chr4",148037736,148040918,"+",0,"NA","promoter-TSS (NM_011929)","promoter-TSS (NM_011929)",250,"NM_010840",17769,"Mm.89959","NM_010840","ENSMUSG00000029009","Mthfr","AI323986","5,10-methylenetetrahydrofolate reductase","protein-coding"]
[3309,"chr17",15499530,15500396,"+",0,"NA","promoter-TSS (NM_013684)","promoter-TSS (NM_013684)",75,"NM_013684",21374,"Mm.244820","NM_013684","ENSMUSG00000014767","Tbp","GTF2D1|Gtf2d|SCA17|TFIID","TATA box binding protein","protein-coding"]
[3594,"chr17",46627176,46629413,"+",0,"NA","intron (NM_175168, intron 1 of 19)","intron (NM_175168, intron 1 of 19)",1210,"NM_175168",71461,"Mm.181833","NM_175168","ENSMUSG00000023972","Ptk7","8430404F20Rik|chz|mPTK7/CCK4","PTK7 protein tyrosine kinase 7","protein-coding"]
[1803,"chr12",64917970,64918552,"+",0,"NA","intron (NM_001025605, intron 1 of 4)","CpG",350,"NM_001025605",217648,"Mm.341586","NM_001025605","ENSMUSG00000047227","Gm527","-","predicted gene 527","protein-coding"]
[5492,"chr4",40278964,40279997,"+",0,"NA","promoter-TSS (NM_001033305)","promoter-TSS (NM_001033305)",-59,"NM_001033305",230075,"Mm.1103","NM_001033305","ENSMUSG00000071014","Ndufb6","CI-B17|Gm137","NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6","protein-coding"]
[17,"chr1",13659920,13661096,"+",0,"NA","promoter-TSS (NM_145381)","promoter-TSS (NM_145381)",1,"NM_145381",212442,"Mm.89572","NM_145381",null,"Lactb2","Cgi-83|E430032H21Rik","lactamase, beta 2","protein-coding"]
[2356,"chr14",20393039,20394377,"+",0,"NA","promoter-TSS (NM_025440)","promoter-TSS (NM_025440)",-153,"NM_025440",66242,"Mm.23747","NM_025440","ENSMUSG00000049960","Mrps16","1500011E11Rik|Mprs16","mitochondrial ribosomal protein S16","protein-coding"]
[5823,"chr4",130175354,130175546,"+",0,"NA","promoter-TSS (NM_023476)","promoter-TSS (NM_023476)",-328,"NM_023476",94242,"Mm.15801","NM_023476","ENSMUSG00000028776","Tinagl1","1110021J17Rik|AZ-1|AZ1|Arg1|Lcn7|TARP|Tinagl","tubulointerstitial nephritis antigen-like 1","protein-coding"]
[5807,"chr4",129377109,129378181,"+",0,"NA","intron (NM_028603, intron 1 of 4)","GC_rich|Low_complexity|Low_complexity",383,"NM_028603",73680,"Mm.32997","NM_028603","ENSMUSG00000028807","Zbtb8a","2410081M15Rik|AI480941","zinc finger and BTB domain containing 8a","protein-coding"]
[7493,"chr7",102565032,102565429,"+",0,"NA","intron (NM_009277, intron 1 of 7)","intron (NM_009277, intron 1 of 7)",252,"NM_001082552",20821,"Mm.321227","NM_009277","ENSMUSG00000030966","Trim21","Ro52|Ssa1","tripartite motif-containing 21","protein-coding"]
[3663,"chr17",62879633,62884169,"+",0,"NA","promoter-TSS (NM_010109)","promoter-TSS (NM_010109)",-584,"NM_010109",13640,"Mm.7978","NM_010109",null,"Efna5","AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS","ephrin A5","protein-coding"]
[2652,"chr15",10469851,10471273,"+",0,"NA","promoter-TSS (NM_030046)","promoter-TSS (NM_030046)",-46,"NM_030046",78244,"Mm.297862","NM_030046","ENSMUSG00000044224","Dnajc21","4930461P20Rik|9930116P15Rik","DnaJ (Hsp40) homolog, subfamily C, member 21","protein-coding"]
[5014,"chr3",10366276,10367687,"+",0,"NA","promoter-TSS (NM_025519)","promoter-TSS (NM_025519)",8,"NM_025519",66371,"Mm.366147","NM_025519",null,"Chmp4c","2010012P02Rik|2210015K02Rik|2310010I16Rik|Shax3|Snf7-3","charged multivesicular body protein 4C","protein-coding"]
[1288,"chr11",75629733,75632664,"+",0,"NA","intron (NM_008916, intron 1 of 11)","CpG",178,"NM_008916",19062,"Mm.1458","NM_008916","ENSMUSG00000006127","Inpp5k","C62|Pps|SKIP","inositol polyphosphate 5-phosphatase K","protein-coding"]
[5425,"chr4",4016026,4022958,"+",0,"NA","5' UTR (NM_181989, exon 1 of 7)","5' UTR (NM_181989, exon 1 of 7)",171,"NM_181989",242285,"Mm.98096","NM_181989","ENSMUSG00000028236","Sdr16c5","Rdhe2|Scdr9","short chain dehydrogenase/reductase family 16C, member 5","protein-coding"]
[6462,"chr5",129847127,129847710,"+",0,"NA","TTS (NM_009838)","TTS (NM_009838)",428,"NM_026445",67902,"Mm.103546","NM_026445","ENSMUSG00000025538","Sumf2","2610040F05Rik","sulfatase modifying factor 2","protein-coding"]
[8270,"chr9",20642922,20645684,"+",0,"NA","promoter-TSS (NM_001310746)","promoter-TSS (NM_001310746)",464,"NM_001286529",30843,"Mm.24608","NM_013911","ENSMUSG00000066892","Fbxl12","3110048D16Rik|Fbl12","F-box and leucine-rich repeat protein 12","protein-coding"]
[8277,"chr9",21002400,21003577,"+",0,"NA","exon (NM_023167, exon 1 of 9)","exon (NM_023167, exon 1 of 9)",251,"NM_023167",66163,"Mm.427576","NM_023167","ENSMUSG00000003299","Mrpl4","1110017G11Rik","mitochondrial ribosomal protein L4","protein-coding"]
[4477,"chr2",33467382,33468536,"+",0,"NA","intron (NM_027947, intron 1 of 3)","intron (NM_027947, intron 1 of 3)",573,"NM_027947",71834,"Mm.44186","NM_027947","ENSMUSG00000026788","Zbtb43","1700010E06Rik|Zfp297b|mKIAA0414","zinc finger and BTB domain containing 43","protein-coding"]
[5300,"chr3",107758434,107760844,"+",0,"NA","intron (NM_001113529, intron 1 of 8)","intron (NM_001113529, intron 1 of 8)",830,"NM_001113530",12977,"Mm.795","NM_007778","ENSMUSG00000014599","Csf1","C87615|Csfm|MCSF|op","colony stimulating factor 1 (macrophage)","protein-coding"]
[6078,"chr5",23850652,23851313,"+",0,"NA","intron (NR_045040, intron 1 of 3)","intron (NR_045040, intron 1 of 3)",385,"NR_045040",67194,"Mm.423733","NR_045040","ENSMUSG00000097180","2700038G22Rik","-","RIKEN cDNA 2700038G22 gene","ncRNA"]
[1511,"chr11",101301299,101302251,"+",0,"NA","exon (NM_019584, exon 2 of 12)","exon (NM_019584, exon 2 of 12)",492,"NM_019584",56208,"Mm.178947","NM_019584",null,"Becn1","4921513J16Rik|5430417M23Rik|Atg6","beclin 1, autophagy related","protein-coding"]
[5538,"chr4",46450531,46453159,"+",0,"NA","intron (NM_130889, intron 1 of 6)","CpG",728,"NM_130889",67628,"Mm.263913","NM_130889",null,"Anp32b","2410015B15Rik|PAL31|PHAPI2a|Ssp29","acidic (leucine-rich) nuclear phosphoprotein 32 family, member B","protein-coding"]
[4301,"chr19",60579992,60581718,"+",0,"NA","5' UTR (NM_001172096, exon 1 of 8)","5' UTR (NM_001172096, exon 1 of 8)",168,"NM_001172097",78832,"Mm.259026","NM_030197","ENSMUSG00000033417","Cacul1","2700078E11Rik|2810417M16Rik|9830127L17Rik|AI450346|D130033C15Rik","CDK2 associated, cullin domain 1","protein-coding"]
[4295,"chr19",57609642,57612613,"+",0,"NA","promoter-TSS (NM_181415)","promoter-TSS (NM_181415)",93,"NM_181415",226255,"Mm.245340","NM_181415","ENSMUSG00000054843","Atrnl1","AI504415|AW555641|Alp|Atrnl|Atrnlp","attractin like 1","protein-coding"]
[2276,"chr13",97198022,97199405,"+",0,"NA","promoter-TSS (NM_010422)","promoter-TSS (NM_010422)",-356,"NM_010422",15212,"Mm.27816","NM_010422","ENSMUSG00000021665","Hexb","-","hexosaminidase B","protein-coding"]
[8444,"chr9",57763792,57766535,"+",0,"NA","exon (NM_007713, exon 1 of 13)","exon (NM_007713, exon 1 of 13)",697,"NM_007713",102414,"Mm.25720","NM_007713","ENSMUSG00000032316","Clk3","AI256811","CDC-like kinase 3","protein-coding"]
[5501,"chr4",41274392,41276084,"+",0,"NA","promoter-TSS (NM_026872)","promoter-TSS (NM_026872)",-103,"NM_026872",68926,"Mm.41864","NM_026872","ENSMUSG00000028433","Ubap2","1190005K07Rik|AA408600|AU045235|UBAP-2|mKIAA1491","ubiquitin-associated protein 2","protein-coding"]
[6063,"chr5",18359001,18361221,"+",0,"NA","exon (NM_010305, exon 1 of 8)","exon (NM_010305, exon 1 of 8)",302,"NM_010305",14677,"Mm.254629","NM_010305","ENSMUSG00000057614","Gnai1","AU046200|Gialpha1|Gnai-1","guanine nucleotide binding protein (G protein), alpha inhibiting 1","protein-coding"]
[7510,"chr7",109518172,109520315,"+",0,"NA","promoter-TSS (NR_028079)","promoter-TSS (NR_028079)",48,"NM_011975",26451,"Mm.305750","NM_011975","ENSMUSG00000046364","Rpl27a","L27'|L27A|L29","ribosomal protein L27A","protein-coding"]
[3280,"chr17",3557051,3558312,"+",0,"NA","promoter-TSS (NM_146074)","promoter-TSS (NM_146074)",32,"NM_146074",224481,"Mm.226554","NM_146074","ENSMUSG00000036983","Tfb1m","AI429207","transcription factor B1, mitochondrial","protein-coding"]
[6826,"chr6",85331274,85333753,"+",0,"NA","intron (NM_178639, intron 1 of 13)","intron (NM_178639, intron 1 of 13)",909,"NM_178639",94282,"Mm.121485","NM_178639","ENSMUSG00000033720","Sfxn5","C230001H08Rik","sideroflexin 5","protein-coding"]
[1869,"chr12",80434516,80437620,"+",0,"NA","intron (NM_177267, intron 1 of 8)","G-rich|Low_complexity|Low_complexity",533,"NM_177267",320808,"Mm.220310","NM_177267","ENSMUSG00000049106","Dcaf5","9430020B07Rik|AI325023|AI430035|AI848110|AW124614|BCRG2|BCRP2|Wdr22","DDB1 and CUL4 associated factor 5","protein-coding"]
[7096,"chr7",16841745,16846319,"+",0,"NA","intron (NM_001252458, intron 2 of 18)","intron (NM_001252458, intron 2 of 18)",967,"NM_178900",101540,"Mm.1881","NM_178900","ENSMUSG00000041187","Prkd2","AI325941|PKD2","protein kinase D2","protein-coding"]
[3481,"chr17",33823783,33825415,"+",0,"NA","promoter-TSS (NM_016844)","promoter-TSS (NM_016844)",27,"NR_103516",66416,"Mm.29513","NM_023202","ENSMUSG00000041881","Ndufa7","14.5kDa|2400007M02Rik|CI-B14.5a","NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (B14.5a)","protein-coding"]
[7798,"chr8",25720059,25720740,"+",0,"NA","TTS (NM_001081269)","TTS (NM_001081269)",351,"NR_121643",71910,"Mm.385055","NM_028000","ENSMUSG00000031570","Plpp5","1810019D05Rik|2310022A04Rik|AW045471|Ppapdc1|Ppapdc1b","phospholipid phosphatase 5","protein-coding"]
[8454,"chr9",59539504,59540025,"+",0,"NA","promoter-TSS (NM_010421)","promoter-TSS (NM_010421)",97,"NM_010421",15211,"Mm.2284","NM_010421","ENSMUSG00000025232","Hexa","Hex-1","hexosaminidase A","protein-coding"]
[4227,"chr19",42779162,42780271,"+",0,"NA","intron (NM_019424, intron 1 of 19)","CpG",260,"NM_019424",192236,"Mm.218381","NM_019424","ENSMUSG00000025188","Hps1","6030422N11Rik|BB405864|Gm21361|Hps|ep","Hermansky-Pudlak syndrome 1 homolog (human)","protein-coding"]
[5036,"chr3",30995023,30996950,"+",0,"NA","exon (NM_008857, exon 1 of 18)","exon (NM_008857, exon 1 of 18)",215,"NM_008857",18759,"Mm.291554","NM_008857","ENSMUSG00000037643","Prkci","2310021H13Rik|AI427505|PKClambda|Pkci|Pkcl|Prkcl|aPKClambda|mKIAA4165","protein kinase C, iota","protein-coding"]
[5290,"chr3",104817226,104818519,"+",0,"NA","intron (NM_001163441, intron 2 of 20)","CpG",433,"NM_008619",17454,"Mm.1597","NM_008619","ENSMUSG00000002227","Mov10","C77703|Mov-10","Moloney leukemia virus 10","protein-coding"]
[6610,"chr5",149051190,149052988,"+",0,"NA","promoter-TSS (NM_001313894)","promoter-TSS (NM_001313894)",-473,"NM_001313894",15289,"Mm.207047","NM_010439","ENSMUSG00000066551","Hmgb1","HMG-1|Hmg1|SBP-1|p30","high mobility group box 1","protein-coding"]
[6731,"chr6",48553787,48555289,"+",0,"NA","promoter-TSS (NM_001110160)","promoter-TSS (NM_001110160)",-261,"NM_001110160",243371,"Mm.290764","NM_177736","ENSMUSG00000073096","Lrrc61","BC027309","leucine rich repeat containing 61","protein-coding"]
[8138,"chr8",110846164,110848152,"+",0,"NA","promoter-TSS (NM_133953)","promoter-TSS (NM_133953)",134,"NM_133973",102339,"Mm.272930","NM_133973","ENSMUSG00000031753","Cog4","AW554810|D8Ertd515e","component of oligomeric golgi complex 4","protein-coding"]
[2738,"chr15",64311607,64313321,"+",0,"NA","exon (NM_010026, exon 3 of 31)","exon (NM_010026, exon 3 of 31)",209,"NM_001276462",13196,"Mm.277236","NM_010026","ENSMUSG00000022377","Asap1","AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19","ArfGAP with SH3 domain, ankyrin repeat and PH domain1","protein-coding"]
[5179,"chr3",89730201,89731525,"+",0,"NA","intron (NM_001146296, intron 1 of 14)","intron (NM_001146296, intron 1 of 14)",145,"NM_019655",56417,"Mm.316628","NM_019655","ENSMUSG00000027951","Adar","AV242451|Adar1|Adar1p110|Adar1p150|mZaADAR","adenosine deaminase, RNA-specific","protein-coding"]
[8786,"chrX",13042090,13042526,"+",0,"NA","intron (NR_038158, intron 1 of 2)","L1MDa|LINE|L1",293,"NR_038158",70489,"Mm.383563","NR_038158","ENSMUSG00000087424","5730405O15Rik","-","RIKEN cDNA 5730405O15 gene","ncRNA"]
[4044,"chr19",5731230,5731665,"+",0,"NA","exon (NM_020491, exon 2 of 4)","exon (NM_020491, exon 2 of 4)",285,"NM_020491",56390,"Mm.455818","NM_020491","ENSMUSG00000079478","Sssca1","1500016H19Rik|C184L","Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)","protein-coding"]
[6893,"chr6",113306919,113308639,"+",0,"NA","intron (NM_001282128, intron 1 of 13)","intron (NM_001282128, intron 1 of 13)",642,"NM_001282126",78783,"Mm.356059","NM_030178","ENSMUSG00000001632","Brpf1","4833438B11Rik|4930540D11Rik|Brpf2","bromodomain and PHD finger containing, 1","protein-coding"]
[5642,"chr4",105157512,105158327,"+",0,"NA","exon (NM_080555, exon 1 of 6)","exon (NM_080555, exon 1 of 6)",572,"NM_080555",67916,"Mm.348326","NM_080555","ENSMUSG00000028517","Plpp3","1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b|Ppap2b","phospholipid phosphatase 3","protein-coding"]
[7702,"chr7",141474544,141475942,"+",0,"NA","promoter-TSS (NM_025593)","promoter-TSS (NM_025593)",7,"NM_053082",64540,"Mm.489619","NM_053082","ENSMUSG00000025511","Tspan4","AI325509|AI746565|D130042I01Rik|NAG-2|Tm4sf7|Tspan-4","tetraspanin 4","protein-coding"]
[7633,"chr7",127989609,127996059,"+",0,"NA","exon (NM_023258, exon 3 of 3)","exon (NM_023258, exon 3 of 3)",1033,"NM_023258",66824,"Mm.24163","NM_023258",null,"Pycard","9130417A21Rik|Asc|CARD5|TMS-1|TNS1|masc","PYD and CARD domain containing","protein-coding"]
[249,"chr1",97660747,97662596,"+",0,"NA","intron (NM_133825, intron 1 of 2)","CpG",347,"NM_133825",52392,"Mm.12309","NM_133825","ENSMUSG00000044768","D1Ertd622e","AI987691|AW047450","DNA segment, Chr 1, ERATO Doi 622, expressed","protein-coding"]
[8096,"chr8",105758004,105759652,"+",0,"NA","promoter-TSS (NM_027469)","promoter-TSS (NM_027469)",-221,"NM_027469",70575,"Mm.40954","NM_027469",null,"Gfod2","5730466C23Rik","glucose-fructose oxidoreductase domain containing 2","protein-coding"]
[8574,"chr9",94668019,94670476,"+",0,"NA","promoter-TSS (NM_177909)","promoter-TSS (NM_177909)",-645,"NM_177909",331004,"Mm.326125","NM_177909","ENSMUSG00000031129","Slc9a9","5730527A11Rik|9930105B05|AI854429|Nhe9","solute carrier family 9 (sodium/hydrogen exchanger), member 9","protein-coding"]
[1479,"chr11",99420067,99420655,"+",0,"NA","intron (NM_010661, intron 2 of 7)","intron (NM_010661, intron 2 of 7)",1898,"NM_010661",268482,"Mm.436651","NM_010661","ENSMUSG00000020912","Krt12","AI835216|K12|Krt-12|Krt1-12","keratin 12","protein-coding"]
[8142,"chr8",111033464,111034421,"+",0,"NA","promoter-TSS (NM_146217)","promoter-TSS (NM_146217)",100,"NM_146217",234734,"Mm.24174","NM_146217",null,"Aars","AI316495|C76919|sti","alanyl-tRNA synthetase","protein-coding"]
[5605,"chr4",86747730,86750514,"+",0,"NA","intron (NM_184088, intron 1 of 31)","CpG",567,"NM_184088",329877,"Mm.273718","NM_184088","ENSMUSG00000038024","Dennd4c","1700065A05Rik|AA420392","DENN/MADD domain containing 4C","protein-coding"]
[479,"chr1",184822111,184824094,"+",0,"NA","promoter-TSS (NR_035502)","promoter-TSS (NR_035502)",-614,"NR_035502",100316821,null,"NR_035502","ENSMUSG00000088559","Mir1981","mir-1981|mmu-mir-1981","microRNA 1981","ncRNA"]
[7038,"chr7",3664784,3666226,"+",0,"NA","TTS (NM_181820)","TTS (NM_181820)",335,"NM_027203",69757,"Mm.389782","NM_027203","ENSMUSG00000078813","Leng1","1500001K17Rik","leukocyte receptor cluster (LRC) member 1","protein-coding"]
[2101,"chr13",41603831,41607129,"+",0,"NA","promoter-TSS (NM_001163572)","promoter-TSS (NM_001163572)",-736,"NM_001163572",621976,"Mm.259830","NM_001163572","ENSMUSG00000087370","Tmem170b","EG621976","transmembrane protein 170B","protein-coding"]
[7995,"chr8",84269453,84270942,"+",0,"NA","intron (NM_001294281, intron 1 of 8)","intron (NM_001294281, intron 1 of 8)",205,"NM_001294281",67736,"Mm.30095","NM_026350","ENSMUSG00000004994","Ccdc130","4930527D15Rik|C77430","coiled-coil domain containing 130","protein-coding"]
[3395,"chr17",26123636,26124249,"+",0,"NA","TTS (NM_021793)","TTS (NM_021793)",439,"NM_024227",68611,"Mm.273102","NM_024227","ENSMUSG00000024181","Mrpl28","1110015G04Rik|L28mt|MAAT1|MRP-L28|p15","mitochondrial ribosomal protein L28","protein-coding"]
[7620,"chr7",127572715,127573101,"+",0,"NA","promoter-TSS (NM_026888)","promoter-TSS (NM_026888)",-440,"NM_026888",68961,"Mm.274473","NM_026888","ENSMUSG00000030815","Phkg2","1500017I02Rik","phosphorylase kinase, gamma 2 (testis)","protein-coding"]
[6801,"chr6",73247937,73248901,"+",0,"NA","promoter-TSS (NM_019879)","promoter-TSS (NM_019879)",-86,"NM_019879",56451,"Mm.29845","NM_019879","ENSMUSG00000052738","Suclg1","1500000I01Rik|Sucla1","succinate-CoA ligase, GDP-forming, alpha subunit","protein-coding"]
[612,"chr10",42678686,42679359,"+",0,"NA","exon (NM_172416, exon 1 of 6)","exon (NM_172416, exon 1 of 6)",106,"NM_172416",14628,"Mm.46636","NM_172416","ENSMUSG00000038280","Ostm1","1200002H13Rik|HSPC019|gl","osteopetrosis associated transmembrane protein 1","protein-coding"]
[1391,"chr11",88047013,88049536,"+",0,"NA","intron (NM_173374, intron 1 of 3)","CpG",901,"NM_173374",110809,"Mm.391719","NM_173374","ENSMUSG00000018379","Srsf1","1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1","serine/arginine-rich splicing factor 1","protein-coding"]
[3579,"chr17",45591026,45593105,"+",0,"NA","intron (NM_001199115, intron 2 of 12)","intron (NM_001199115, intron 2 of 12)",328,"NM_022880",63959,"Mm.29744","NM_022880","ENSMUSG00000023942","Slc29a1","1200014D21Rik|AA407560|ENT1","solute carrier family 29 (nucleoside transporters), member 1","protein-coding"]
[214,"chr1",87755456,87756676,"+",0,"NA","promoter-TSS (NM_001205392)","promoter-TSS (NM_001205392)",55,"NM_001205392",77040,"Mm.272972","NM_029846","ENSMUSG00000026289","Atg16l1","1500009K01Rik|Apg16l|Atg16l|WDR30","autophagy related 16-like 1 (S. cerevisiae)","protein-coding"]
[2789,"chr15",76659396,76660548,"+",0,"NA","promoter-TSS (NM_001276335)","promoter-TSS (NM_001276335)",-236,"NM_001276335",54151,"Mm.247752","NM_019396","ENSMUSG00000053929","Cyhr1","1110031M01Rik|AU042374|Chrp","cysteine and histidine rich 1","protein-coding"]
[2547,"chr14",67007759,67009527,"+",0,"NA","intron (NM_009761, intron 1 of 5)","CpG",234,"NM_009761",12177,"Mm.29820","NM_009761","ENSMUSG00000022051","Bnip3l","C86132|D14Ertd719e|Nip3L|Nix","BCL2/adenovirus E1B interacting protein 3-like","protein-coding"]
[1928,"chr12",100110252,100110836,"+",0,"NA","Intergenic","CpG",-1787,"NM_008947",19179,"Mm.157105","NM_008947","ENSMUSG00000021178","Psmc1","AI325227|P26s4|Rpt2/S4|S4|rpt2","protease (prosome, macropain) 26S subunit, ATPase 1","protein-coding"]
[8593,"chr9",99629593,99633279,"+",0,"NA","intron (NM_001311142, intron 1 of 15)","B1_Mur4|SINE|Alu",1858,"NM_001311142",72507,"Mm.221455","NM_028258","ENSMUSG00000037784","Dzip1l","2610524A10Rik|AI663976","DAZ interacting protein 1-like","protein-coding"]
[4748,"chr2",127583530,127584636,"+",0,"NA","intron (NM_028141, intron 1 of 5)","intron (NM_028141, intron 1 of 5)",594,"NM_001111029",72180,"Mm.46715","NM_028141","ENSMUSG00000034800","Zfp661","2810405K07Rik|A1-5|Znf2","zinc finger protein 661","protein-coding"]
[1243,"chr11",70409550,70410822,"+",0,"NA","promoter-TSS (NM_029231)","promoter-TSS (NM_029231)",-155,"NM_029231",75273,"Mm.340601","NM_029231","ENSMUSG00000018921","Pelp1","4930563C04Rik|MNAR","proline, glutamic acid and leucine rich protein 1","protein-coding"]
[3408,"chr17",27027278,27028561,"+",0,"NA","intron (NM_007523, intron 1 of 5)","intron (NM_007523, intron 1 of 5)",707,"NM_007523",12018,"Mm.2443","NM_007523","ENSMUSG00000057789","Bak1","Bak|N-BAK1|N-Bak","BCL2-antagonist/killer 1","protein-coding"]
[3885,"chr18",53176344,53177085,"+",0,"NA","intron (NM_026386, intron 1 of 14)","CpG",349,"NM_026386",67804,"Mm.252171","NM_026386","ENSMUSG00000034484","Snx2","0610030A03Rik","sorting nexin 2","protein-coding"]
[2564,"chr14",70545294,70548776,"+",0,"NA","intron (NM_180588, intron 3 of 7)","intron (NM_180588, intron 3 of 7)",1784,"NM_180588",72549,"Mm.46742","NM_180588","ENSMUSG00000033589","Reep4","2700029E10Rik","receptor accessory protein 4","protein-coding"]
[5779,"chr4",126259088,126262917,"+",0,"NA","Intergenic","Intergenic",-1403,"NM_013718",27096,"Mm.8392","NM_013718","ENSMUSG00000028847","Trappc3","1110058K12Rik|AI835942|AU019197|Bet3","trafficking protein particle complex 3","protein-coding"]
[3745,"chr17",94749347,94750528,"+",0,"NA","promoter-TSS (NM_176917)","promoter-TSS (NM_176917)",-45,"NM_176917",76781,"Mm.139146","NM_176917","ENSMUSG00000055660","Mettl4","2410198H06Rik|A730091E08Rik|AV296509|HsT661","methyltransferase like 4","protein-coding"]
[7015,"chr6",143165835,143167993,"+",0,"NA","promoter-TSS (NM_029250)","promoter-TSS (NM_029250)",-316,"NM_029250",75320,"Mm.272548","NM_029250","ENSMUSG00000030275","Etnk1","1110061E11Rik|4930555L11Rik|AI195356|AI841245|C80956|D6Ertd3e|EKI1","ethanolamine kinase 1","protein-coding"]
[5731,"chr4",118620615,118621212,"+",0,"NA","promoter-TSS (NM_026789)","promoter-TSS (NM_026789)",114,"NM_026932",69072,"Mm.29906","NM_026932","ENSMUSG00000028729","Ebna1bp2","1810014B19Rik|AA537058|B830003A16Rik|C81321|Ebp2|Nobp|p40","EBNA1 binding protein 2","protein-coding"]
[2226,"chr13",74062004,74062311,"+",0,"NA","intron (NM_028959, intron 1 of 11)","CpG",128,"NM_028959",74470,"Mm.73234","NM_028959","ENSMUSG00000021572","Cep72","2610029E11Rik|4933440J22Rik","centrosomal protein 72","protein-coding"]
[2878,"chr15",85831955,85832632,"+",0,"NA","promoter-TSS (NM_001033337)","promoter-TSS (NM_001033337)",-11,"NM_001033337",239570,"Mm.151748","NM_001033337","ENSMUSG00000035944","Ttc38","9030019H09","tetratricopeptide repeat domain 38","protein-coding"]
[44,"chr1",36243758,36245194,"+",0,"NA","promoter-TSS (NM_198899)","promoter-TSS (NM_198899)",-174,"NM_198899",320011,"Mm.261022","NM_198899","ENSMUSG00000037470","Uggt1","0910001L17Rik|A930007H10Rik|AA589501|AI414429|AI448372|C820010P03Rik|GT|UGT1|Ugcgl1","UDP-glucose glycoprotein glucosyltransferase 1","protein-coding"]
[5312,"chr3",108443706,108445825,"+",0,"NA","intron (NM_011319, intron 1 of 11)","CpG",494,"NM_011319",20226,"Mm.28688","NM_011319","ENSMUSG00000068739","Sars","Sars1|Strs|serRS","seryl-aminoacyl-tRNA synthetase","protein-coding"]
[2008,"chr13",8884935,8886575,"+",0,"NA","5' UTR (NM_145360, exon 1 of 5)","5' UTR (NM_145360, exon 1 of 5)",149,"NM_145360",319554,"Mm.29847","NM_145360","ENSMUSG00000058258","Idi1","4832416K17Rik","isopentenyl-diphosphate delta isomerase","protein-coding"]
[6504,"chr5",136376085,136378003,"+",0,"NA","intron (NM_198602, intron 4 of 22)","intron (NM_198602, intron 4 of 22)",-1241,"NR_030500",723975,null,"NR_030500","ENSMUSG00000106479","Mir721","Mirn721|miRY|mir-721|mmu-mir-721","microRNA 721","ncRNA"]
[8935,"chrX",139684432,139685346,"+",0,"NA","promoter-TSS (NM_001081499)","promoter-TSS (NM_001081499)",-107,"NM_001081499",245638,"Mm.275869","NM_001081499","ENSMUSG00000042473","Tbc1d8b","4921505D17Rik|9030605E16Rik","TBC1 domain family, member 8B","protein-coding"]
[397,"chr1",166408360,166410187,"+",0,"NA","5' UTR (NM_175170, exon 2 of 6)","5' UTR (NM_175170, exon 2 of 6)",555,"NM_175170",71592,"Mm.192094","NM_175170","ENSMUSG00000040596","Pogk","9130401E23Rik|BASS2|mKIAA1513","pogo transposable element with KRAB domain","protein-coding"]
[6088,"chr5",24840166,24843791,"+",0,"NA","intron (NM_053075, intron 1 of 7)","CpG",383,"NM_053075",19744,"Mm.319175","NM_053075","ENSMUSG00000028945","Rheb","Rheb1","Ras homolog enriched in brain","protein-coding"]
[8430,"chr9",57071424,57074713,"+",0,"NA","intron (NM_001110351, intron 1 of 21)","CpG",1028,"NM_001110351",20466,"Mm.15755","NM_011378","ENSMUSG00000042557","Sin3a","AW553200|Sin3|mKIAA4126|mSin3A","transcriptional regulator, SIN3A (yeast)","protein-coding"]
[4432,"chr2",30132610,30135046,"+",0,"NA","promoter-TSS (NM_146252)","promoter-TSS (NM_146252)",-43,"NM_146252",70296,"Mm.19172","NM_146252","ENSMUSG00000039678","Tbc1d13","2600014A06Rik|BC025586","TBC1 domain family, member 13","protein-coding"]
[6264,"chr5",92277517,92278687,"+",0,"NA","promoter-TSS (NM_025972)","promoter-TSS (NM_025972)",79,"NM_001163687",67111,"Mm.28890","NM_025972","ENSMUSG00000029413","Naaa","2210023K21Rik|3830414F09Rik|Asahl","N-acylethanolamine acid amidase","protein-coding"]
[7270,"chr7",41499444,41500386,"+",0,"NA","promoter-TSS (NM_001033530)","promoter-TSS (NM_001033530)",-25,"NM_001033530",101835,"Mm.370336","NM_001033530","ENSMUSG00000074166","AW146154","AI451288","expressed sequence AW146154","protein-coding"]
[3039,"chr16",15862436,15863741,"+",0,"NA","5' UTR (NM_029354, exon 1 of 3)","5' UTR (NM_029354, exon 1 of 3)",234,"NM_029354",72083,"Mm.22351","NM_029354","ENSMUSG00000022671","Mzt2","2410018G20Rik|2610001E06Rik|Fam128|Fam128b","mitotic spindle organizing protein 2","protein-coding"]
[2978,"chr15",103014061,103016160,"+",0,"NA","TTS (NR_030526)","TTS (NR_030526)",200,"NR_030526",751557,null,"NR_030526","ENSMUSG00000076010","Mir615","Mir|Mirn615|mir-615|mmu-mir-615","microRNA 615","ncRNA"]
[4037,"chr19",5601899,5602519,"+",0,"NA","TTS (NM_178637)","TTS (NM_178637)",336,"NM_026616",68209,"Mm.246200","NM_026616",null,"Rnaseh2c","1500026D16Rik|AYP1","ribonuclease H2, subunit C","protein-coding"]
[6811,"chr6",83124557,83125493,"+",0,"NA","promoter-TSS (NM_023547)","promoter-TSS (NM_023547)",4,"NM_023547",70020,"Mm.27814","NM_023547","ENSMUSG00000030034","Ino80b","2510009I23Rik|HMG1YL4|Hmga1l4|Papa1|Znhit4","INO80 complex subunit B","protein-coding"]
[6857,"chr6",88901093,88903472,"+",0,"NA","promoter-TSS (NM_011906)","promoter-TSS (NM_011906)",31,"NM_011906",24100,"Mm.284480","NM_011906","ENSMUSG00000002871","Tpra1","40kDa|Gpr175|Tpra40","transmembrane protein, adipocyte asscociated 1","protein-coding"]
[5042,"chr3",33799308,33801294,"+",0,"NA","exon (NM_001290500, exon 1 of 11)","exon (NM_001290500, exon 1 of 11)",118,"NM_025978",67120,"Mm.275710","NM_025978","ENSMUSG00000027677","Ttc14","2700016E08Rik|4930434D01Rik|4931403I22Rik|4933402I15Rik|AI662468|AU014779|AW561908|cI-44|mKIAA1980","tetratricopeptide repeat domain 14","protein-coding"]
[2982,"chr16",3743227,3746308,"+",0,"NA","exon (NM_148924, exon 1 of 6)","exon (NM_148924, exon 1 of 6)",668,"NM_148924",74120,"Mm.29081","NM_148924","ENSMUSG00000022529","Zfp263","1200014J04Rik|AI326880|AU020888|NT2|mFPM315","zinc finger protein 263","protein-coding"]
[1769,"chr12",36156148,36158155,"+",0,"NA","promoter-TSS (NM_025840)","promoter-TSS (NM_025840)",27,"NM_146033",217473,"Mm.130422","NM_146033","ENSMUSG00000036188","Ankmy2","AI035571|ZMYND20","ankyrin repeat and MYND domain containing 2","protein-coding"]
[5087,"chr3",58690664,58693003,"+",0,"NA","promoter-TSS (NR_045167)","promoter-TSS (NR_045167)",555,"NM_009174",20439,"Mm.2847","NM_009174","ENSMUSG00000036432","Siah2","AA415433|Sinh2","seven in absentia 2","protein-coding"]
[5582,"chr4",62521527,62521681,"+",0,"NA","Intergenic","Intergenic",-1541,"NM_008525",17025,"Mm.6988","NM_008525","ENSMUSG00000028393","Alad","ALADH|Lv","aminolevulinate, delta-, dehydratase","protein-coding"]
[6367,"chr5",115506754,115507206,"+",0,"NA","intron (NM_011223, intron 1 of 10)","CpG",304,"NM_133915",19303,"Mm.18714","NM_011223","ENSMUSG00000029528","Pxn","AW108311|AW123232|Pax","paxillin","protein-coding"]
[5169,"chr3",89266632,89267051,"+",0,"NA","exon (NM_026767, exon 2 of 2)","exon (NM_026767, exon 2 of 2)",380,"NM_026767",68563,"Mm.272927","NM_026767","ENSMUSG00000042737","Dpm3","1110001H19Rik|AV117483","dolichyl-phosphate mannosyltransferase polypeptide 3","protein-coding"]
[1569,"chr11",106778833,106781094,"+",0,"NA","promoter-TSS (NR_027785)","promoter-TSS (NR_027785)",-426,"NM_015810",50776,"Mm.859","NM_015810","ENSMUSG00000020718","Polg2","-","polymerase (DNA directed), gamma 2, accessory subunit","protein-coding"]
[2542,"chr14",65261818,65262339,"+",0,"NA","intron (NM_021458, intron 1 of 6)","CpG",385,"NM_021458",14365,"Mm.214687","NM_021458",null,"Fzd3","AU020229|D930050A07Rik|Fz3","frizzled homolog 3 (Drosophila)","protein-coding"]
[3067,"chr16",18348193,18348738,"+",0,"NA","intron (NM_033474, intron 1 of 18)","CpG",283,"NM_001272029",11877,"Mm.293599","NM_033474","ENSMUSG00000000325","Arvcf","-","armadillo repeat gene deleted in velo-cardio-facial syndrome","protein-coding"]
[470,"chr1",182280975,182284651,"+",0,"NA","promoter-TSS (NM_007853)","promoter-TSS (NM_007853)",-54,"NM_007853",13244,"Mm.29648","NM_007853","ENSMUSG00000038633","Degs1","AA536663|Degs|Des1|Mdes","degenerative spermatocyte homolog 1 (Drosophila)","protein-coding"]
[5142,"chr3",88058040,88058483,"+",0,"NA","intron (NM_144897, intron 1 of 5)","intron (NM_144897, intron 1 of 5)",234,"NM_144897",246703,"Mm.205996","NM_144897","ENSMUSG00000028070","Apoa1bp","AA087124|AI-BP|AIBP|Apoa1ip|ESTM37","apolipoprotein A-I binding protein","protein-coding"]
[2403,"chr14",31435741,31436455,"+",0,"NA","promoter-TSS (NM_011894)","promoter-TSS (NM_011894)",-65,"NM_011894",24056,"Mm.383198","NM_011894","ENSMUSG00000021892","Sh3bp5","AI606498|SH3BP-5|Sab","SH3-domain binding protein 5 (BTK-associated)","protein-coding"]
[3993,"chr19",4119763,4121499,"+",0,"NA","intron (NM_016666, intron 2 of 6)","intron (NM_016666, intron 2 of 6)",944,"NM_001276284",11632,"Mm.10433","NM_016666","ENSMUSG00000024847","Aip","AA408703|AW476050|Ara9|D19Bwg1412e|Fkbp16|Xap2","aryl-hydrocarbon receptor-interacting protein","protein-coding"]
[7150,"chr7",25277505,25283345,"+",0,"NA","intron (NM_001302811, intron 2 of 20)","intron (NM_001302811, intron 2 of 20)",-1754,"NM_027882",71722,"Mm.28833","NM_027882","ENSMUSG00000005442","Cic","1200010B10Rik|mKIAA0306","capicua homolog (Drosophila)","protein-coding"]
[5138,"chr3",87918789,87920341,"+",0,"NA","promoter-TSS (NM_026591)","promoter-TSS (NM_026591)",21,"NM_026591",67707,"Mm.393802","NM_026591",null,"Mrpl24","2010005E08Rik|2810470K06Rik|6720473G22Rik|AA407670","mitochondrial ribosomal protein L24","protein-coding"]
[3382,"chr17",25727250,25728483,"+",0,"NA","promoter-TSS (NM_145409)","promoter-TSS (NM_145409)",115,"NM_028009",106707,"Mm.24603","NM_028009","ENSMUSG00000041199","Rpusd1","2310051D06Rik|AU019540|Rlucl","RNA pseudouridylate synthase domain containing 1","protein-coding"]
[7616,"chr7",127448308,127449079,"+",0,"NA","exon (NM_175163, exon 1 of 3)","exon (NM_175163, exon 1 of 3)",465,"NM_175163",71131,"Mm.474533","NM_175163",null,"Zfp689","4933416E05Rik|Znf689","zinc finger protein 689","protein-coding"]
[196,"chr1",82316270,82317137,"+",0,"NA","intron (NM_029777, intron 1 of 6)","CpG",124,"NM_029777",76867,"Mm.226994","NM_029777","ENSMUSG00000026142","Rhbdd1","4930418P06Rik|RRP4|mRHBDD1","rhomboid domain containing 1","protein-coding"]
[118,"chr1",58585461,58586917,"+",0,"NA","promoter-TSS (NM_025597)","promoter-TSS (NM_025597)",-35,"NM_001310599",213056,"Mm.26272","NM_172513","ENSMUSG00000038174","Fam126b","C130065N10Rik|D1Ertd53e|D630010C10","family with sequence similarity 126, member B","protein-coding"]
[8492,"chr9",65907841,65910255,"+",0,"NA","promoter-TSS (NM_173185)","promoter-TSS (NM_173185)",38,"NM_173185",214897,"Mm.325816","NM_173185","ENSMUSG00000032384","Csnk1g1","9130020E21Rik","casein kinase 1, gamma 1","protein-coding"]
[767,"chr10",80825977,80827951,"+",0,"NA","intron (NM_001301034, intron 1 of 4)","CpG",268,"NR_027656",100041965,"Mm.328806","NR_027656",null,"Oaz1-ps","ENSMUSG00000043801|Gm1823|Gm9786|Oaz-ps","ornithine decarboxylase antizyme 1, pseudogene","pseudo"]
[805,"chr10",85127713,85128647,"+",0,"NA","promoter-TSS (NM_028832)","promoter-TSS (NM_028832)",-153,"NM_028832",74238,"Mm.255401","NM_028832","ENSMUSG00000049038","Mterf2","1700007D05Rik|Mterfd3","mitochondrial transcription termination factor 2","protein-coding"]
[6287,"chr5",101763524,101767175,"+",0,"NA","5' UTR (NM_173370, exon 1 of 13)","5' UTR (NM_173370, exon 1 of 13)",219,"NM_173370",74596,"Mm.46764","NM_173370","ENSMUSG00000029330","Cds1","4833409J18Rik|AI314024|AW125888","CDP-diacylglycerol synthase 1","protein-coding"]
[3503,"chr17",34604356,34608784,"+",0,"NA","intron (NM_001163379, intron 1 of 6)","intron (NM_001163379, intron 1 of 6)",709,"NM_001163379",55979,"Mm.8684","NM_018862","ENSMUSG00000034254","Agpat1","1-AGP|1-AGPAT|AW047140","1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)","protein-coding"]
[2395,"chr14",30950822,30951857,"+",0,"NA","promoter-TSS (NM_011849)","promoter-TSS (NM_011849)",-38,"NM_001308328",23955,"Mm.251494","NM_011849","ENSMUSG00000021918","Nek4","Stk2","NIMA (never in mitosis gene a)-related expressed kinase 4","protein-coding"]
[4937,"chr2",165991790,165993993,"+",0,"NA","intron (NM_008679, intron 1 of 22)","CpG",254,"NM_008679",17979,"Mm.469663","NM_008679","ENSMUSG00000027678","Ncoa3","2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip","nuclear receptor coactivator 3","protein-coding"]
[4035,"chr19",5557063,5561874,"+",0,"NA","intron (NM_019935, intron 1 of 3)","intron (NM_019935, intron 1 of 3)",1107,"NM_019935",18426,"Mm.280225","NM_019935","ENSMUSG00000024922","Ovol1","BB147136|Ovo1|movo1","OVO homolog-like 1 (Drosophila)","protein-coding"]
[6119,"chr5",31251694,31252126,"+",0,"NA","TTS (NM_147201)","TTS (NM_147201)",204,"NM_027221",69815,"Mm.389609","NM_027221","ENSMUSG00000029149","Krtcap3","2010001C09Rik|AW321088|Kcp3","keratinocyte associated protein 3","protein-coding"]
[5228,"chr3",95124545,95127659,"+",0,"NA","intron (NM_016712, intron 3 of 9)","intron (NM_016712, intron 3 of 9)",1588,"NM_016712",50874,"Mm.71935","NM_016712","ENSMUSG00000005628","Tmod4","MTMOD|Sk-Tmod","tropomodulin 4","protein-coding"]
[2450,"chr14",50943958,50945010,"+",0,"NA","5' UTR (NM_013632, exon 1 of 6)","5' UTR (NM_013632, exon 1 of 6)",181,"NM_013632",18950,"Mm.17932","NM_013632","ENSMUSG00000021871","Pnp","AL024301|AU015798|Np|Np-1|Np-2|Pnp1","purine-nucleoside phosphorylase","protein-coding"]
[3986,"chr19",3906660,3907682,"+",0,"NA","promoter-TSS (NM_001136091)","promoter-TSS (NM_001136091)",-38,"NM_001136091",27060,"Mm.271689","NM_016921","ENSMUSG00000001750","Tcirg1","ATP6N1C|ATP6a3|Atp6i|OC-116|OPTB1|Stv1|TIRC7|Vph1|oc","T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3","protein-coding"]
[1870,"chr12",80463139,80463788,"+",0,"NA","intron (NM_133798, intron 1 of 8)","CpG",368,"NM_133798",97827,"Mm.206631","NM_133798","ENSMUSG00000032705","Exd2","4930539P14Rik|C85658|Exdl2","exonuclease 3'-5' domain containing 2","protein-coding"]
[4513,"chr2",50295726,50297106,"+",0,"NA","promoter-TSS (NR_040361)","promoter-TSS (NR_040361)",261,"NM_133839",109129,"Mm.29214","NM_133839","ENSMUSG00000026766","Mmadhc","2010311D03Rik|AI314967","methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria","protein-coding"]
[3276,"chr16",97920903,97925821,"+",0,"NA","promoter-TSS (NM_174847)","promoter-TSS (NM_174847)",-729,"NM_174847",207781,"Mm.1465","NM_174847","ENSMUSG00000045975","C2cd2","5730563M15|5830404H04Rik|AI314146|AI449533|BF168443|ORF25|mKIAA4045","C2 calcium-dependent domain containing 2","protein-coding"]
[2575,"chr14",73510047,73510434,"+",0,"NA","intron (NM_026119, intron 1 of 6)","CpG",191,"NM_026119",67381,"Mm.282888","NM_026119","ENSMUSG00000022109","Med4","2410046H15Rik|DRIP36|HSPC126|TRAP36|Vdirp|Vdrip","mediator complex subunit 4","protein-coding"]
[4641,"chr2",104589387,104591342,"+",0,"NA","promoter-TSS (NM_145529)","promoter-TSS (NM_145529)",-120,"NM_177253",228410,"Mm.259876","NM_145529","ENSMUSG00000027176","Cstf3","4732468G05Rik|C79532|CstF-77","cleavage stimulation factor, 3' pre-RNA, subunit 3","protein-coding"]
[7964,"chr8",78508157,78509970,"+",0,"NA","promoter-TSS (NM_029736)","promoter-TSS (NM_029736)",-135,"NM_009033",19656,"Mm.24718","NM_009033","ENSMUSG00000037070","Rbmxl1","Hnrpg|Rbmx|Rbmxrt","RNA binding motif protein, X-linked like-1","protein-coding"]
[7602,"chr7",127041872,127042849,"+",0,"NA","promoter-TSS (NM_145588)","promoter-TSS (NM_145588)",60,"NM_145588",110033,"Mm.286488","NM_145588","ENSMUSG00000030677","Kif22","AU021460|C81217|Kid|Kif22a","kinesin family member 22","protein-coding"]
[8635,"chr9",107340215,107340849,"+",0,"NA","promoter-TSS (NM_175486)","promoter-TSS (NM_175486)",-108,"NM_175486",235599,"Mm.71039","NM_175486","ENSMUSG00000037977","6430571L13Rik","-","RIKEN cDNA 6430571L13 gene","protein-coding"]
[4684,"chr2",119028874,119029305,"+",0,"NA","intron (NM_199310, intron 1 of 3)","intron (NM_199310, intron 1 of 3)",304,"NM_199310",269336,"Mm.292465","NM_199310","ENSMUSG00000039983","Ccdc32","Gm631","coiled-coil domain containing 32","protein-coding"]
[2967,"chr15",102135819,102136845,"+",0,"NA","promoter-TSS (NM_001033277)","promoter-TSS (NM_001033277)",-117,"NM_001033277",223918,"Mm.385009","NM_001033277","ENSMUSG00000036966","Spryd3","BC008150","SPRY domain containing 3","protein-coding"]
[4398,"chr2",26499875,26504334,"+",0,"NA","intron (NM_008714, intron 1 of 33)","intron (NM_008714, intron 1 of 33)",1718,"NM_008714",18128,"Mm.290610","NM_008714","ENSMUSG00000026923","Notch1","9930111A19Rik|Mis6|N1|Tan1|lin-12","notch 1","protein-coding"]
[2201,"chr13",67305988,67306995,"+",0,"NA","promoter-TSS (NM_001003666)","promoter-TSS (NM_001003666)",-79,"NM_001003666",431706,"Mm.439456","NM_001003666","ENSMUSG00000055341","Zfp457","Rslcan-6","zinc finger protein 457","protein-coding"]
[364,"chr1",157459395,157460430,"+",0,"NA","intron (NM_001033284, intron 2 of 9)","intron (NM_001033284, intron 2 of 9)",1330,"NM_001033284",226527,"Mm.215960","NM_001033284",null,"BC026585","-","cDNA sequence BC026585","protein-coding"]
[2680,"chr15",34442102,34444514,"+",0,"NA","promoter-TSS (NR_028101)","promoter-TSS (NR_028101)",-32,"NM_001163485",19946,"Mm.358632","NM_009083","ENSMUSG00000058600","Rpl30","-","ribosomal protein L30","protein-coding"]
[1025,"chr11",22981552,22982715,"+",0,"NA","exon (NM_144514, exon 1 of 3)","exon (NM_144514, exon 1 of 3)",151,"NM_144514",17846,"Mm.259903","NM_144514",null,"Commd1","AI256843|Murr1|U2/Mu","COMM domain containing 1","protein-coding"]
[4692,"chr2",119546528,119548231,"+",0,"NA","promoter-TSS (NM_019769)","promoter-TSS (NM_019769)",248,"NM_172857",241624,"Mm.212773","NM_172857","ENSMUSG00000048647","Exd1","4932702D22Rik|Exdl1","exonuclease 3'-5' domain containing 1","protein-coding"]
[2478,"chr14",54912599,54913085,"+",0,"NA","intron (NM_021551, intron 1 of 8)","CpG-4485",290,"NM_021551",59049,"Mm.27435","NM_021551","ENSMUSG00000022199","Slc22a17","1700094C23Rik|24p3R|AU041908|AW555662|BOIT|Boct|mBOCT","solute carrier family 22 (organic cation transporter), member 17","protein-coding"]
[8079,"chr8",104590907,104591959,"+",0,"NA","promoter-TSS (NM_001024606)","promoter-TSS (NM_001024606)",-35,"NM_001024606",382051,"Mm.290750","NM_001024606","ENSMUSG00000048371","Pdp2","4833426J09Rik|Gm1705|mKIAA1348","pyruvate dehyrogenase phosphatase catalytic subunit 2","protein-coding"]
[2449,"chr14",50924080,50925901,"+",0,"NA","promoter-TSS (NM_133676)","promoter-TSS (NM_133676)",41,"NM_009687",11792,"Mm.203","NM_009687","ENSMUSG00000035960","Apex1","APE|Apex|HAP1|Ref-1","apurinic/apyrimidinic endonuclease 1","protein-coding"]
[4107,"chr19",8892504,8893588,"+",0,"NA","promoter-TSS (NM_176843)","promoter-TSS (NM_176843)",59,"NM_176843",109077,"Mm.290474","NM_176843","ENSMUSG00000071652","Ints5","1110055N21Rik|mKIAA1698","integrator complex subunit 5","protein-coding"]
[8411,"chr9",54559936,54560933,"+",0,"NA","promoter-TSS (NM_019686)","promoter-TSS (NM_019686)",-355,"NM_019686",56506,"Mm.42192","NM_019686",null,"Cib2","2810434I23Rik|AI449053","calcium and integrin binding family member 2","protein-coding"]
[4838,"chr2",152331986,152332959,"+",0,"NA","promoter-TSS (NM_001083921)","promoter-TSS (NM_001083921)",-47,"NM_001083921",24105,"Mm.182145","NM_019705","ENSMUSG00000027466","Rbck1","AL033326|HOIL-1|HOIL-1L|UIP28|Ubce7ip3","RanBP-type and C3HC4-type zinc finger containing 1","protein-coding"]
[1386,"chr11",87662714,87664490,"+",0,"NA","intron (NM_172448, intron 1 of 9)","intron (NM_172448, intron 1 of 9)",515,"NM_172448",207742,"Mm.440230","NM_172448","ENSMUSG00000034177","Rnf43","4732452J19Rik","ring finger protein 43","protein-coding"]
[8883,"chrX",85776226,85777536,"+",0,"NA","promoter-TSS (NM_008194)","promoter-TSS (NM_008194)",-62,"NM_001294138",14933,"Mm.246682","NM_008194","ENSMUSG00000025059","Gk","D930012N15Rik|Gyk","glycerol kinase","protein-coding"]
[295,"chr1",131278517,131281103,"+",0,"NA","promoter-TSS (NM_019777)","promoter-TSS (NM_019777)",-247,"NM_019777",56489,"Mm.386783","NM_019777","ENSMUSG00000042349","Ikbke","AW558201|IKK-i|IKKepsilon|Ikki","inhibitor of kappaB kinase epsilon","protein-coding"]
[7377,"chr7",78913387,78914979,"+",0,"NA","promoter-TSS (NM_001113527)","promoter-TSS (NM_001113527)",-52,"NM_001113527",57444,"Mm.322843","NM_020583","ENSMUSG00000039236","Isg20","1600023I01Rik|2010107M23Rik|20kDa|DnaQL|HEM45","interferon-stimulated protein","protein-coding"]
[6873,"chr6",97178111,97180079,"+",0,"NA","promoter-TSS (NM_001081111)","promoter-TSS (NM_001081111)",29,"NM_001081111",232286,"Mm.30893","NM_001081111","ENSMUSG00000030059","Tmf1","7030402D04Rik|Gm153|Tmf1`","TATA element modulatory factor 1","protein-coding"]
[8072,"chr8",95853110,95853454,"+",0,"NA","intron (NM_172758, intron 1 of 11)","intron (NM_172758, intron 1 of 11)",209,"NM_172758",234595,"Mm.29267","NM_172758","ENSMUSG00000036534","Slc38a7","D430050E18","solute carrier family 38, member 7","protein-coding"]
[3671,"chr17",65642519,65643927,"+",0,"NA","Intergenic","Intergenic",-1019,"NM_001146002",213272,"Mm.255732","NM_153519","ENSMUSG00000050612","Txndc2","AU021712|Sptrx-1|Sptrx1|Trx4","thioredoxin domain containing 2 (spermatozoa)","protein-coding"]
[3871,"chr18",44828164,44829391,"+",0,"NA","exon (NM_001163013, exon 1 of 30)","exon (NM_001163013, exon 1 of 30)",112,"NM_001163013",240255,"Mm.244482","NM_001163013","ENSMUSG00000034653","Ythdc2","3010002F02Rik|BC037178","YTH domain containing 2","protein-coding"]
[2923,"chr15",98662091,98663197,"+",0,"NA","intron (NM_001080981, intron 1 of 16)","intron (NM_001080981, intron 1 of 16)",245,"NM_001080981",74351,"Mm.45725","NM_001080981","ENSMUSG00000003360","Ddx23","3110082M05Rik|4921506D17Rik","DEAD (Asp-Glu-Ala-Asp) box polypeptide 23","protein-coding"]
[5200,"chr3",90536601,90543054,"+",0,"NA","Intergenic","Intergenic",-1396,"NM_026416",67860,"Mm.331185","NM_026416","ENSMUSG00000074457","S100a16","2300002L21Rik|AI325039|AI663996|DT1P1A7|S100F","S100 calcium binding protein A16","protein-coding"]
[100,"chr1",54249947,54251472,"+",0,"NA","promoter-TSS (NM_030025)","promoter-TSS (NM_030025)",26,"NM_030025",78016,"Mm.67455","NM_030025","ENSMUSG00000025983","Ccdc150","4930511H11Rik","coiled-coil domain containing 150","protein-coding"]
[2232,"chr13",74769036,74772854,"+",0,"NA","promoter-TSS (NM_001301157)","promoter-TSS (NM_001301157)",-209,"NM_001301155",12380,"Mm.29163","NM_009817",null,"Cast","-","calpastatin","protein-coding"]
[4646,"chr2",105904122,105905126,"+",0,"NA","promoter-TSS (NM_028260)","promoter-TSS (NM_028260)",-14,"NM_028260",66541,"Mm.272253","NM_028260","ENSMUSG00000042670","Immp1l","1500034J20Rik|2610528O17Rik|AU042386","IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)","protein-coding"]
[7947,"chr8",72239636,72242784,"+",0,"NA","intron (NM_007456, intron 1 of 11)","B4|SINE|B4",1078,"NM_007456",11767,"Mm.290086","NM_007456","ENSMUSG00000003033","Ap1m1","AA408894|AP47|Adtm1A|Cltnm|[m]1A|mu1A","adaptor-related protein complex AP-1, mu subunit 1","protein-coding"]
[6166,"chr5",36869160,36869765,"+",0,"NA","intron (NM_172994, intron 1 of 8)","CpG",892,"NM_172994",269643,"Mm.41694","NM_172994","ENSMUSG00000029120","Ppp2r2c","6330548O06Rik|IMYPNO|IMYPNO1|PR52","protein phosphatase 2, regulatory subunit B, gamma","protein-coding"]
[7355,"chr7",65369391,65371867,"+",0,"NA","intron (NM_001163574, intron 1 of 26)","CpG",615,"NM_001163574",21872,"Mm.4342","NM_009386","ENSMUSG00000030516","Tjp1","ZO1","tight junction protein 1","protein-coding"]
[235,"chr1",92830665,92833601,"+",0,"NA","intron (NM_016696, intron 1 of 8)","CpG",447,"NM_016696",14733,"Mm.297976","NM_016696","ENSMUSG00000034220","Gpc1","AI462976","glypican 1","protein-coding"]
[2291,"chr13",100730209,100731285,"+",0,"NA","intron (NM_009874, intron 1 of 11)","CpG",195,"NM_009874",12572,"Mm.259718","NM_009874","ENSMUSG00000069089","Cdk7","AI323415|AI528512|C230069N13|Cdkn7|Crk4","cyclin-dependent kinase 7","protein-coding"]
[7733,"chr8",3501679,3502687,"+",0,"NA","intron (NM_053177, intron 1 of 13)","intron (NM_053177, intron 1 of 13)",1664,"NM_053177",94178,"Mm.8356","NM_053177","ENSMUSG00000004567","Mcoln1","2210015I05Rik|TRPML1|mucolipidin","mucolipin 1","protein-coding"]
[6357,"chr5",115157191,115159319,"+",0,"NA","promoter-TSS (NM_175403)","promoter-TSS (NM_175403)",-79,"NM_175403",109154,"Mm.153963","NM_175403","ENSMUSG00000048578","Mlec","2410014A08Rik|AI850530|ESTM19|X83352|mKIAA0152","malectin","protein-coding"]
[171,"chr1",74713089,74713923,"+",0,"NA","promoter-TSS (NM_024264)","promoter-TSS (NM_024264)",-29,"NM_024264",104086,"Mm.85083","NM_024264","ENSMUSG00000026170","Cyp27a1","1300013A03Rik|Cyp27","cytochrome P450, family 27, subfamily a, polypeptide 1","protein-coding"]
[5449,"chr4",12087393,12087969,"+",0,"NA","intron (NM_177861, intron 1 of 27)","intron (NM_177861, intron 1 of 27)",276,"NM_177861",329795,"Mm.475125","NM_177861","ENSMUSG00000049488","Tmem67","5330408M12Rik|B230117O07|b2b1163.1Clo|b2b1291.1Clo","transmembrane protein 67","protein-coding"]
[8921,"chrX",113185090,113185467,"+",0,"NA","intron (NM_018818, intron 1 of 14)","intron (NM_018818, intron 1 of 14)",237,"NM_018818",12662,"Mm.257316","NM_018818","ENSMUSG00000025531","Chm","Rep-1","choroidermia (RAB escort protein 1)","protein-coding"]
[2687,"chr15",36281799,36283673,"+",0,"NA","intron (NM_013923, intron 1 of 9)","CpG",411,"NM_013923",30945,"Mm.5181","NM_013923","ENSMUSG00000022280","Rnf19a","AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp","ring finger protein 19A","protein-coding"]
[582,"chr10",31312570,31313996,"+",0,"NA","promoter-TSS (NM_027168)","promoter-TSS (NM_027168)",-122,"NM_027168",69692,"Mm.245537","NM_027168","ENSMUSG00000000295","Hddc2","2310057G13Rik","HD domain containing 2","protein-coding"]
[1884,"chr12",83596298,83597067,"+",0,"NA","intron (NM_183154, intron 1 of 11)","intron (NM_183154, intron 1 of 11)",465,"NM_183154",217695,"Mm.59257","NM_183154","ENSMUSG00000042628","Zfyve1","DFCP1|G630053K23|TAFF1|ZNFN2A1|mKIAA1589","zinc finger, FYVE domain containing 1","protein-coding"]
[4868,"chr2",155517151,155518766,"+",0,"NA","promoter-TSS (NM_019811)","promoter-TSS (NM_019811)",-85,"NM_019811",60525,"Mm.255026","NM_019811","ENSMUSG00000027605","Acss2","1110017C11Rik|ACAS|Acas1|Acas2|AceCS1|Acs1","acyl-CoA synthetase short-chain family member 2","protein-coding"]
[557,"chr10",19620748,19623788,"+",0,"NA","intron (NM_178258, intron 1 of 4)","intron (NM_178258, intron 1 of 4)",240,"NM_178258",237310,"Mm.331979","NM_178258","ENSMUSG00000039760","Il22ra2","CRF2-10|CRF2-s1|CRF2X|Il-22bp","interleukin 22 receptor, alpha 2","protein-coding"]
[8675,"chr9",108936732,108937593,"+",0,"NA","intron (NM_025407, intron 2 of 12)","CpG-15416",514,"NM_025407",22273,"Mm.335460","NM_025407","ENSMUSG00000025651","Uqcrc1","1110032G10Rik","ubiquinol-cytochrome c reductase core protein 1","protein-coding"]
[4482,"chr2",34822343,34822649,"+",0,"NA","intron (NM_001164769, intron 3 of 6)","intron (NM_001164769, intron 3 of 6)",685,"NM_001164768",30050,"Mm.4465","NM_013890","ENSMUSG00000035949","Fbxw2","2700071L08Rik|FBW2|Fwd2|MD6","F-box and WD-40 domain protein 2","protein-coding"]
[7132,"chr7",19920188,19921365,"+",0,"NA","intron (NM_027514, intron 1 of 7)","PB1D7|SINE|Alu",367,"NM_027514",52118,"Mm.227506","NM_027514","ENSMUSG00000040511","Pvr","3830421F03Rik|CD155|D7Ertd458e|HVED|PVS|Taa1|Tage4|mE4|necl-5","poliovirus receptor","protein-coding"]
[7251,"chr7",34912463,34912943,"+",0,"NA","intron (NM_008820, intron 1 of 14)","intron (NM_008820, intron 1 of 14)",296,"NM_008820",18624,"Mm.69751","NM_008820","ENSMUSG00000063931","Pepd","Pep-4|Pep4|dal","peptidase D","protein-coding"]
[1980,"chr12",112584654,112589592,"+",0,"NA","Intergenic","IMPB_01|Satellite|Satellite",-1661,"NM_198411",70435,"Mm.250193","NM_198411","ENSMUSG00000037679","Inf2","2610204M08Rik|AA589465|AW125550|EG629699","inverted formin, FH2 and WH2 domain containing","protein-coding"]
[8859,"chrX",74023059,74024152,"+",0,"NA","promoter-TSS (NR_039594)","promoter-TSS (NR_039594)",-7,"NR_039594",100628601,null,"NR_039594","ENSMUSG00000092907","Mir5132","mir-5132|mmu-mir-5132|mu-mir-5132","microRNA 5132","ncRNA"]
[8809,"chrX",36874384,36875074,"+",0,"NA","exon (NM_001313696, exon 2 of 6)","exon (NM_001313696, exon 2 of 6)",434,"NM_019668",22209,"Mm.395649","NM_019668","ENSMUSG00000016308","Ube2a","HHR6A|HR6A|Mhr6a","ubiquitin-conjugating enzyme E2A","protein-coding"]
[590,"chr10",34482985,34485113,"+",0,"NA","exon (NM_001159544, exon 1 of 8)","exon (NM_001159544, exon 1 of 8)",649,"NM_010237",14302,"Mm.332432","NM_010237","ENSMUSG00000019779","Frk","BSK|BSK/IYK|C85044|GTK|RAK","fyn-related kinase","protein-coding"]
[5832,"chr4",132259649,132262436,"+",0,"NA","intron (NM_001122992, intron 1 of 10)","CpG",507,"NM_020273",56809,"Mm.103489","NM_020273","ENSMUSG00000028901","Gmeb1","1110050A04Rik|AI256615|AI481278","glucocorticoid modulatory element binding protein 1","protein-coding"]
[8788,"chrX",13279981,13282622,"+",0,"NA","intron (NM_010028, intron 1 of 16)","CpG",279,"NM_010028",13205,"Mm.289662","NM_010028","ENSMUSG00000000787","Ddx3x","D1Pas1-rs2|Ddx3|Fin14","DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked","protein-coding"]
[352,"chr1",155146092,155147369,"+",0,"NA","promoter-TSS (NM_008209)","promoter-TSS (NM_008209)",50,"NM_008209",15064,"Mm.7580","NM_008209","ENSMUSG00000026471","Mr1","H2ls","major histocompatibility complex, class I-related","protein-coding"]
[6606,"chr5",148398926,148400116,"+",0,"NA","intron (NM_007513, intron 1 of 12)","CpG",383,"NM_007513",11987,"Mm.275489","NM_007513","ENSMUSG00000041313","Slc7a1","4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1","solute carrier family 7 (cationic amino acid transporter, y+ system), member 1","protein-coding"]
[2803,"chr15",77839282,77843533,"+",0,"NA","intron (NM_022410, intron 1 of 40)","CpG",768,"NM_022410",17886,"Mm.29677","NM_022410","ENSMUSG00000022443","Myh9","Fltn|Myhn-1|Myhn1|NMHCIIA|NMMHC-A|NMMHC-IIA|TU72.6","myosin, heavy polypeptide 9, non-muscle","protein-coding"]
[6991,"chr6",134790984,134793248,"+",0,"NA","intron (NM_130447, intron 1 of 6)","GC_rich|Low_complexity|Low_complexity",512,"NM_130447",70686,"Mm.491182","NM_130447","ENSMUSG00000030203","Dusp16","3830417M17Rik|AW558566|D6Ertd213e|MKP-7|MKP7|Mkpm","dual specificity phosphatase 16","protein-coding"]
[920,"chr10",128175831,128177079,"+",0,"NA","5' UTR (NM_019711, exon 1 of 13)","5' UTR (NM_019711, exon 1 of 13)",113,"NM_019711",56516,"Mm.42247","NM_019711","ENSMUSG00000040043","Rbms2","2610315E04Rik|Scr3","RNA binding motif, single stranded interacting protein 2","protein-coding"]
[3545,"chr17",35909076,35911531,"+",0,"NA","promoter-TSS (NM_028476)","promoter-TSS (NM_028476)",-235,"NM_001142744",73242,"Mm.273155","NM_028476","ENSMUSG00000024426","Atat1","0610011P08Rik|2610008K08Rik|2610110G12Rik|3110080J08Rik|Mec17|TAT","alpha tubulin acetyltransferase 1","protein-coding"]
[8562,"chr9",87022026,87022805,"+",0,"NA","intron (NM_024195, intron 1 of 15)","intron (NM_024195, intron 1 of 15)",386,"NM_024195",266690,"Mm.30166","NM_024195","ENSMUSG00000032872","Cyb5r4","2810034J18Rik|B5+B5R|C79736|Cb5cb5r|Ncb5or|b5/b5r|b5b5r","cytochrome b5 reductase 4","protein-coding"]
[5336,"chr3",119782065,119783698,"+",0,"NA","intron (NM_001310711, intron 1 of 13)","CpG",507,"NM_001310711",56195,"Mm.29966","NM_019550","ENSMUSG00000028134","Ptbp2","Ptb2|brPTB|nPTB","polypyrimidine tract binding protein 2","protein-coding"]
[6326,"chr5",110286387,110286803,"+",0,"NA","promoter-TSS (NM_008993)","promoter-TSS (NM_008993)",276,"NM_011132",18973,"Mm.35061","NM_011132","ENSMUSG00000007080","Pole","-","polymerase (DNA directed), epsilon","protein-coding"]
[8982,"chrX",167207498,167209858,"+",0,"NA","intron (NM_021278, intron 1 of 2)","intron (NM_021278, intron 1 of 2)",540,"NM_021278",19241,"Mm.142729","NM_021278","ENSMUSG00000049775","Tmsb4x","Ptmb4|Tb4","thymosin, beta 4, X chromosome","protein-coding"]
[2484,"chr14",55105753,55106578,"+",0,"NA","TTS (NM_177049)","TTS (NM_177049)",428,"NM_001303502",11766,"Mm.238879","NM_007455","ENSMUSG00000040701","Ap1g2","Adtg2|G2ad","adaptor protein complex AP-1, gamma 2 subunit","protein-coding"]
[8044,"chr8",92898417,92904362,"+",0,"NA","promoter-TSS (NM_027112)","promoter-TSS (NM_027112)",-6,"NM_027112",69543,"Mm.440514","NM_027112","ENSMUSG00000078144","Capns2","2310005G05Rik|30K-2","calpain, small subunit 2","protein-coding"]
[5903,"chr4",136206504,136206836,"+",0,"NA","intron (NM_001008232, intron 1 of 24)","intron (NM_001008232, intron 1 of 24)",305,"NM_001008232",230837,"Mm.77788","NM_001008232",null,"Asap3","9430088F20Rik|Ddefl1|Gm140|UPLC1","ArfGAP with SH3 domain, ankyrin repeat and PH domain 3","protein-coding"]
[797,"chr10",83543905,83544481,"+",0,"NA","intron (NM_001033375, intron 1 of 32)","CpG",252,"NM_001033375",319277,"Mm.491194","NM_001033375","ENSMUSG00000034560","A230046K03Rik","AA589518|Kiaa1033|mKIAA1033","RIKEN cDNA A230046K03 gene","protein-coding"]
[5570,"chr4",59438183,59438621,"+",0,"NA","5' UTR (NM_001163288, exon 1 of 17)","5' UTR (NM_001163288, exon 1 of 17)",231,"NM_001163288",634731,"Mm.483589","NM_001163288","ENSMUSG00000038578","Susd1","A530080P10|Gm12528|OTTMUSG00000007332","sushi domain containing 1","protein-coding"]
[6972,"chr6",126848673,126849360,"+",0,"NA","intron (NM_025358, intron 1 of 10)","intron (NM_025358, intron 1 of 10)",128,"NM_025358",66108,"Mm.29939","NM_025358","ENSMUSG00000000399","Ndufa9","1010001N11Rik","NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9","protein-coding"]
[5323,"chr3",110250350,110250995,"+",0,"NA","exon (NM_178891, exon 1 of 1)","exon (NM_178891, exon 1 of 1)",327,"NM_178891",99890,"Mm.36115","NM_178891","ENSMUSG00000049300","Prmt6","AW124876|BB233495|Hrmt1l6","protein arginine N-methyltransferase 6","protein-coding"]
[6406,"chr5",122157002,122158987,"+",0,"NA","promoter-TSS (NM_013636)","promoter-TSS (NM_013636)",-285,"NM_013636",19047,"Mm.280784","NM_013636","ENSMUSG00000004455","Ppp1cc","PP-1G|PP1|dis2m1","protein phosphatase 1, catalytic subunit, gamma isoform","protein-coding"]
[2881,"chr15",86057234,86062027,"+",0,"NA","intron (NM_001205353, intron 1 of 18)","intron (NM_001205353, intron 1 of 18)",903,"NM_001205353",223752,"Mm.24442","NM_172611","ENSMUSG00000035900","Gramd4","9930016O13","GRAM domain containing 4","protein-coding"]
[2087,"chr13",38345295,38345587,"+",0,"NA","promoter-TSS (NM_007556)","promoter-TSS (NM_007556)",-275,"NM_007556",12161,"Mm.385759","NM_007556","ENSMUSG00000039004","Bmp6","D13Wsu115e|Vgr1","bone morphogenetic protein 6","protein-coding"]
[8432,"chr9",57076429,57077562,"+",0,"NA","intron (NM_001110350, intron 1 of 20)","CpG",619,"NM_011378",20466,"Mm.15755","NM_011378","ENSMUSG00000042557","Sin3a","AW553200|Sin3|mKIAA4126|mSin3A","transcriptional regulator, SIN3A (yeast)","protein-coding"]
[3161,"chr16",38522108,38523962,"+",0,"NA","promoter-TSS (NM_024273)","promoter-TSS (NM_024273)",-372,"NM_024273",76916,"Mm.132231","NM_024273",null,"Timmdc1","2810021C21Rik|4930455C21Rik|AV135763","translocase of inner mitochondrial membrane domain containing 1","protein-coding"]
[8113,"chr8",106586611,106589476,"+",0,"NA","intron (NR_045470, intron 1 of 2)","B1F|SINE|Alu",900,"NR_045470",68692,"Mm.416843","NR_045470","ENSMUSG00000099139","1110028F18Rik","-","RIKEN cDNA 1110028F18 gene","ncRNA"]
[5465,"chr4",21847535,21848484,"+",0,"NA","non-coding (NR_028384, exon 1 of 1)","non-coding (NR_028384, exon 1 of 1)",426,"NM_025669",66625,"Mm.100117","NM_025669","ENSMUSG00000028248","Pnisr","5730406M06Rik|AA673174|Pinsr|Sfrs18|Srsf18","PNN interacting serine/arginine-rich","protein-coding"]
[7849,"chr8",46489692,46493284,"+",0,"NA","intron (NM_001302163, intron 1 of 20)","intron (NM_001302163, intron 1 of 20)",522,"NM_001302163",14081,"Mm.210323","NM_007981","ENSMUSG00000018796","Acsl1","Acas|Acas1|Acs|FACS|Facl2|LACS 1|LACS1","acyl-CoA synthetase long-chain family member 1","protein-coding"]
[4437,"chr2",30285944,30287668,"+",0,"NA","promoter-TSS (NM_177648)","promoter-TSS (NM_177648)",373,"NM_198304",227699,"Mm.330119","NM_198304","ENSMUSG00000052533","Nup188","BC025526|U89435|mKIAA0169","nucleoporin 188","protein-coding"]
[620,"chr10",44267074,44268915,"+",0,"NA","promoter-TSS (NM_001314013)","promoter-TSS (NM_001314013)",-345,"NM_001314013",11793,"Mm.22264","NM_053069","ENSMUSG00000038160","Atg5","2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy","autophagy related 5","protein-coding"]
[8389,"chr9",50528189,50528702,"+",0,"NA","intron (NM_011220, intron 1 of 5)","CpG",196,"NM_011220",19286,"Mm.35856","NM_011220","ENSMUSG00000032067","Pts","PTPS","6-pyruvoyl-tetrahydropterin synthase","protein-coding"]
[3266,"chr16",95701914,95705932,"+",0,"NA","intron (NM_011809, intron 1 of 9)","intron (NM_011809, intron 1 of 9)",1516,"NM_011809",23872,"Mm.290207","NM_011809","ENSMUSG00000022895","Ets2","AU022856|Ets-2","E26 avian leukemia oncogene 2, 3' domain","protein-coding"]
[5002,"chr2",181693482,181694899,"+",0,"NA","promoter-TSS (NM_001291210)","promoter-TSS (NM_001291210)",-213,"NM_001291209",56470,"Mm.274366","NM_026446","ENSMUSG00000002458","Rgs19","2610042F04Rik|AI324841|AW547781|GAIP","regulator of G-protein signaling 19","protein-coding"]
[1786,"chr12",54654417,54658352,"+",0,"NA","exon (NM_134054, exon 1 of 2)","exon (NM_134054, exon 1 of 2)",188,"NM_134054",104725,"Mm.485026","NM_134054","ENSMUSG00000044408","Sptssa","1110002B05Rik|AA407909|AA409588|AU041967|Ssspta","serine palmitoyltransferase, small subunit A","protein-coding"]
[6057,"chr5",8798044,8798651,"+",0,"NA","intron (NM_011075, intron 1 of 27)","CpG",200,"NM_011075",18669,"Mm.146649","NM_011075","ENSMUSG00000028970","Abcb1b","Abcb1|Mdr1|Mdr1b|Pgy-1|Pgy1|mdr","ATP-binding cassette, sub-family B (MDR/TAP), member 1B","protein-coding"]
[5257,"chr3",96726894,96728507,"+",0,"NA","promoter-TSS (NM_028925)","promoter-TSS (NM_028925)",89,"NM_026406",67845,"Mm.386792","NM_026406","ENSMUSG00000028098","Rnf115","2610028E05Rik|AU042696|Zfp364","ring finger protein 115","protein-coding"]
[93,"chr1",52725870,52727888,"+",0,"NA","intron (NM_133829, intron 1 of 6)","CpG",439,"NM_178081",98682,"Mm.491173","NM_133829","ENSMUSG00000041439","Mfsd6","2210010L05Rik|9630025I22Rik|AI836200|AW212394|MMR2","major facilitator superfamily domain containing 6","protein-coding"]
[6807,"chr6",83054062,83055422,"+",0,"NA","promoter-TSS (NM_019752)","promoter-TSS (NM_019752)",-171,"NM_019752",64704,"Mm.21880","NM_019752","ENSMUSG00000068329","Htra2","AI481710|Omi|Prss25|mnd2","HtrA serine peptidase 2","protein-coding"]
[8979,"chrX",166478801,166479608,"+",0,"NA","intron (NM_019773, intron 1 of 2)","intron (NM_019773, intron 1 of 2)",663,"NM_019773",56382,"Mm.25306","NM_019773","ENSMUSG00000079316","Rab9","2410064E05Rik|AI195561|Rab9a|Sid6061p","RAB9, member RAS oncogene family","protein-coding"]
[8426,"chr9",56417458,56419206,"+",0,"NA","promoter-TSS (NM_172924)","promoter-TSS (NM_172924)",-282,"NM_172924",244895,"Mm.490331","NM_172924",null,"Peak1","1110049L02Rik|9530046P14|AA690169|BE132841|C230081A13Rik|SGK269|mKIAA2002","pseudopodium-enriched atypical kinase 1","protein-coding"]
[3767,"chr18",11632661,11636038,"+",0,"NA","intron (NR_045527, intron 1 of 17)","intron (NR_045527, intron 1 of 17)",1073,"NR_045527",225182,"Mm.154275","NM_175458","ENSMUSG00000041238","Rbbp8","9930104E21Rik|CtIP|RBBP-8|RIM|SAE2","retinoblastoma binding protein 8","protein-coding"]
[5353,"chr3",127837051,127838119,"+",0,"NA","promoter-TSS (NM_145964)","promoter-TSS (NM_145964)",-93,"NM_145964",211556,"Mm.403486","NM_145964","ENSMUSG00000074238","Ap1ar","AA407621|C78909|Gadkin","adaptor-related protein complex 1 associated regulatory protein","protein-coding"]
[7858,"chr8",47989572,47991393,"+",0,"NA","promoter-TSS (NM_133791)","promoter-TSS (NM_133791)",69,"NM_133791",52357,"Mm.235074","NM_133791",null,"Wwc2","5330431C14Rik|AU022508|C85457|D8Ertd594e","WW, C2 and coiled-coil domain containing 2","protein-coding"]
[8275,"chr9",20951886,20952836,"+",0,"NA","5' UTR (NM_001199433, exon 1 of 39)","5' UTR (NM_001199433, exon 1 of 39)",262,"NM_001199433",13433,"Mm.128580","NM_010066","ENSMUSG00000004099","Dnmt1","Cxxc9|Dnmt|Dnmt1o|MCMT|MTase|Met-1|Met1|MommeD2|m.MmuI","DNA methyltransferase (cytosine-5) 1","protein-coding"]
[8970,"chrX",162887895,162888415,"+",0,"NA","exon (NM_025932, exon 1 of 9)","exon (NM_025932, exon 1 of 9)",307,"NM_025932",67043,"Mm.44207","NM_025932","ENSMUSG00000031357","Syap1","2010110O17Rik|AW011796","synapse associated protein 1","protein-coding"]
[732,"chr10",79748290,79748612,"+",0,"NA","intron (NR_038088, intron 3 of 4)","intron (NR_038088, intron 3 of 4)",-1870,"NM_172551",216151,"Mm.39001","NM_172551","ENSMUSG00000020329","Polrmt","1110018N15Rik|4932416K13","polymerase (RNA) mitochondrial (DNA directed)","protein-coding"]
[8023,"chr8",85432043,85432800,"+",0,"NA","intron (NM_025722, intron 1 of 3)","CpG",420,"NR_033144",66714,"Mm.272748","NM_025722","ENSMUSG00000036934","4921524J17Rik","-","RIKEN cDNA 4921524J17 gene","protein-coding"]
[1416,"chr11",95309091,95311402,"+",0,"NA","promoter-TSS (NM_177619)","promoter-TSS (NM_177619)",0,"NM_001195004",217127,"Mm.90213","NM_177619","ENSMUSG00000038909","Kat7","Hbo1|Hboa|Myst2","K(lysine) acetyltransferase 7","protein-coding"]
[1237,"chr11",69999854,70001160,"+",0,"NA","promoter-TSS (NM_007888)","promoter-TSS (NM_007888)",-119,"NM_007888",13543,"Mm.5114","NM_007888","ENSMUSG00000020888","Dvl2","-","dishevelled 2, dsh homolog (Drosophila)","protein-coding"]
[5691,"chr4",115784841,115785930,"+",0,"NA","intron (NM_181040, intron 1 of 8)","intron (NM_181040, intron 1 of 8)",571,"NM_181040",230649,"Mm.109600","NM_181040","ENSMUSG00000028710","Atpaf1","6330547J17Rik|AI593252|ATP11|ATP11p","ATP synthase mitochondrial F1 complex assembly factor 1","protein-coding"]
[5000,"chr2",181597023,181599476,"+",0,"NA","intron (NM_172676, intron 1 of 4)","intron (NM_172676, intron 1 of 4)",898,"NM_172676",229011,"Mm.205422","NM_172676","ENSMUSG00000038605","Samd10","D930033N23Rik|E130318E08","sterile alpha motif domain containing 10","protein-coding"]
[8830,"chrX",51204931,51205750,"+",0,"NA","intron (NM_134163, intron 1 of 7)","CpG",650,"NM_001310515",171170,"Mm.295324","NM_134163",null,"Mbnl3","A530038J18Rik|AI661274|CHCR|E430034C16Rik|MBLX|MBLX39|MBXL","muscleblind-like 3 (Drosophila)","protein-coding"]
[5194,"chr3",90432958,90434647,"+",0,"NA","promoter-TSS (NM_178876)","promoter-TSS (NM_178876)",-166,"NM_178876",229543,"Mm.268564","NM_145540","ENSMUSG00000027933","Ints3","C77668","integrator complex subunit 3","protein-coding"]
[1332,"chr11",79710514,79712167,"+",0,"NA","promoter-TSS (NR_029579)","promoter-TSS (NR_029579)",-629,"NR_029579",387188,null,"NR_029579","ENSMUSG00000065395","Mir193a","Mir193|Mirn193|mir-193a|mmu-mir-193|mmu-mir-193a","microRNA 193a","ncRNA"]
[6389,"chr5",120588148,120588515,"+",0,"NA","promoter-TSS (NM_029408)","promoter-TSS (NM_029408)",282,"NM_145853",252972,"Mm.114054","NM_145853","ENSMUSG00000032741","Tpcn1","5730403B01Rik|Tpc1|mKIAA1169","two pore channel 1","protein-coding"]
[1117,"chr11",53429674,53431878,"+",0,"NA","promoter-TSS (NM_025352)","promoter-TSS (NM_025352)",55,"NM_025352",22272,"Mm.251621","NM_025352","ENSMUSG00000044894","Uqcrq","1100001F06Rik|1500040F11Rik|5830407L17Rik|9.5kDa|AA959903|QP-C|Qpc|Uqcrb|c1502","ubiquinol-cytochrome c reductase, complex III subunit VII","protein-coding"]
[2039,"chr13",23368725,23369624,"+",0,"NA","promoter-TSS (NM_001111107)","promoter-TSS (NM_001111107)",34,"NM_001286156",218100,"Mm.286454","NM_172586","ENSMUSG00000046351","Zfp322a","Znf322|Znf322a","zinc finger protein 322A","protein-coding"]
[6212,"chr5",66619995,66620904,"+",0,"NA","Intergenic","CpG",-1632,"NM_001310626",11787,"Mm.5159","NM_009686","ENSMUSG00000029207","Apbb2","2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra","amyloid beta (A4) precursor protein-binding, family B, member 2","protein-coding"]
[3774,"chr18",12643248,12644180,"+",0,"NA","5' UTR (NM_028341, exon 1 of 14)","5' UTR (NM_028341, exon 1 of 14)",181,"NM_028341",72747,"Mm.52526","NM_028341","ENSMUSG00000024424","Ttc39c","1700008N02Rik|2810439F02Rik","tetratricopeptide repeat domain 39C","protein-coding"]
[8846,"chrX",71556134,71556448,"+",0,"NA","intron (NM_001293623, intron 1 of 4)","CpG",374,"NM_001293625",15354,"Mm.336087","NM_008253","ENSMUSG00000015217","Hmgb3","Hmg2a|Hmg4","high mobility group box 3","protein-coding"]
[1126,"chr11",54786836,54787628,"+",0,"NA","intron (NM_178626, intron 1 of 5)","CpG",471,"NM_178626",72729,"Mm.29476","NM_178626","ENSMUSG00000052298","Cdc42se2","2810404F18Rik|AA408783|AA536669|SPEC2","CDC42 small effector 2","protein-coding"]
[7972,"chr8",80739917,80740390,"+",0,"NA","promoter-TSS (NM_053124)","promoter-TSS (NM_053124)",-694,"NM_053124",93762,"Mm.246803","NM_053124",null,"Smarca5","4933427E24Rik|D030040M08Rik|D330027N15Rik|MommeD4|Snf2h","SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5","protein-coding"]
[3729,"chr17",85089725,85090936,"+",0,"NA","promoter-TSS (NM_001163622)","promoter-TSS (NM_001163622)",-56,"NM_001163624",213760,"Mm.259035","NM_145984","ENSMUSG00000024127","Prepl","2810457N15Rik|9530014L06Rik|D030028O16Rik|mKIAA0436","prolyl endopeptidase-like","protein-coding"]
[3375,"chr17",25133447,25134191,"+",0,"NA","intron (NM_011930, intron 1 of 24)","intron (NM_011930, intron 1 of 24)",425,"NM_011930",26373,"Mm.270587","NM_011930","ENSMUSG00000036636","Clcn7","AA409691|AW538136|ClC-7|D17Wsu51e","chloride channel, voltage-sensitive 7","protein-coding"]
[962,"chr11",4636928,4638420,"+",0,"NA","promoter-TSS (NM_029291)","promoter-TSS (NM_029291)",-119,"NM_029291",75452,"Mm.439906","NM_029291","ENSMUSG00000020412","Ascc2","1700011I11Rik|2610034L15Rik|AI482016|ASC1p100|AW046480","activating signal cointegrator 1 complex subunit 2","protein-coding"]
[3090,"chr16",21787577,21787912,"+",0,"NA","promoter-TSS (NM_023737)","promoter-TSS (NM_023737)",90,"NM_023737",74147,"Mm.28100","NM_023737","ENSMUSG00000022853","Ehhadh","1300002P22Rik|HD|L-PBE|LBFP|LBP|MFP|MFP1|PBFE","enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase","protein-coding"]
[7663,"chr7",134670724,134671408,"+",0,"NA","intron (NM_001033420, intron 1 of 51)","CpG",379,"NM_001033420",330662,"Mm.436572","NM_001033420","ENSMUSG00000058325","Dock1","9130006G06Rik|AI854900|D630004B07Rik","dedicator of cytokinesis 1","protein-coding"]
[518,"chr10",5194352,5195011,"+",0,"NA","promoter-TSS (NM_001079686)","promoter-TSS (NM_001079686)",26,"NM_001079686",64009,"Mm.331626","NM_022027","ENSMUSG00000096054","Syne1","8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|Myne1|mKIAA1756","spectrin repeat containing, nuclear envelope 1","protein-coding"]
[2906,"chr15",94589079,94591751,"+",0,"NA","promoter-TSS (NM_008971)","promoter-TSS (NM_008971)",-591,"NM_008971",19230,"Mm.490250","NM_008971","ENSMUSG00000022451","Twf1","A6|Ptk9|twinfilin","twinfilin, actin-binding protein, homolog 1 (Drosophila)","protein-coding"]
[6025,"chr4",155784202,155784643,"+",0,"NA","exon (NM_001033394, exon 2 of 2)","exon (NM_001033394, exon 2 of 2)",1452,"NM_001033394",320587,"Mm.384382","NM_001033394","ENSMUSG00000073680","Tmem88b","A230069A22Rik","transmembrane protein 88B","protein-coding"]
[2991,"chr16",4640006,4640512,"+",0,"NA","intron (NM_139307, intron 1 of 1)","CpG",314,"NM_139307",246154,"Mm.482140","NM_139307","ENSMUSG00000039646","Vasn","2610528G05Rik|Atia|Slitl2","vasorin","protein-coding"]
[3720,"chr17",80726591,80730280,"+",0,"NA","promoter-TSS (NM_001290345)","promoter-TSS (NM_001290345)",-410,"NM_001290345",225028,"Mm.311948","NM_001081357","ENSMUSG00000024242","Map4k3","4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1","mitogen-activated protein kinase kinase kinase kinase 3","protein-coding"]
[7868,"chr8",60952224,60957084,"+",0,"NA","5' UTR (NM_173876, exon 1 of 12)","5' UTR (NM_173876, exon 1 of 12)",145,"NM_173876",12725,"Mm.25263","NM_007711","ENSMUSG00000004319","Clcn3","Clc3","chloride channel, voltage-sensitive 3","protein-coding"]
[1735,"chr12",17347731,17348817,"+",0,"NA","promoter-TSS (NM_001008421)","promoter-TSS (NM_001008421)",-219,"NM_001008421",217431,"Mm.27536","NM_001008421","ENSMUSG00000061458","Nol10","Gm67","nucleolar protein 10","protein-coding"]
[5250,"chr3",96414269,96414856,"+",0,"NA","non-coding (NR_001579, exon 1 of 1)","non-coding (NR_001579, exon 1 of 1)",271,"NR_001579",21748,null,"NR_001579","ENSMUSG00000064796","Terc","mTER|mTR","telomerase RNA component","ncRNA"]
[8327,"chr9",35210322,35212260,"+",0,"NA","promoter-TSS (NM_026130)","promoter-TSS (NM_026130)",88,"NM_026130",67398,"Mm.284688","NM_026130","ENSMUSG00000032042","Srpr","1300011P19Rik|D11Mgi27","signal recognition particle receptor ('docking protein')","protein-coding"]
[5664,"chr4",108832253,108835414,"+",0,"NA","promoter-TSS (NM_025334)","promoter-TSS (NM_025334)",-249,"NM_027453",70533,"Mm.379178","NM_027453","ENSMUSG00000028568","Btf3l4","4632412E09Rik|5730434I03Rik|AI316863|AU022207|AW552446","basic transcription factor 3-like 4","protein-coding"]
[779,"chr10",81348950,81352700,"+",0,"NA","promoter-TSS (NM_001163166)","promoter-TSS (NM_001163166)",-368,"NM_001163166",15353,"Mm.38474","NM_010440","ENSMUSG00000020232","Hmg20b","AW610687|BRAF35|Hmgx2|Hmgxb2|Smarce1r","high mobility group 20B","protein-coding"]
[981,"chr11",5955272,5956303,"+",0,"NA","promoter-TSS (NM_019661)","promoter-TSS (NM_019661)",29,"NM_019661",56418,"Mm.294821","NM_019661","ENSMUSG00000002741","Ykt6","0610042I15Rik|1810013M05Rik|AW105923","YKT6 homolog (S. Cerevisiae)","protein-coding"]
[1010,"chr11",20200639,20202900,"+",0,"NA","intron (NM_008996, intron 1 of 5)","CpG",167,"NM_008996",19324,"Mm.271944","NM_008996","ENSMUSG00000020149","Rab1a","Gtbp|Rab-1|Rab1|Ypt1|mKIAA3012","RAB1A, member RAS oncogene family","protein-coding"]
[4279,"chr19",53389449,53391765,"+",0,"NA","promoter-TSS (NM_172429)","promoter-TSS (NM_172429)",-34,"NM_172429",76479,"Mm.313687","NM_172429","ENSMUSG00000025024","Smndc1","2410004J23Rik|4933440I19Rik","survival motor neuron domain containing 1","protein-coding"]
[8714,"chr9",119091482,119096127,"+",0,"NA","promoter-TSS (NM_019676)","promoter-TSS (NM_019676)",-302,"NM_019676",18799,"Mm.23963","NM_019676","ENSMUSG00000010660","Plcd1","AW212592|C79986","phospholipase C, delta 1","protein-coding"]
[3739,"chr17",87635923,87638124,"+",0,"NA","intron (NM_008532, intron 2 of 9)","CpG-6684",1044,"NM_008532",17075,"Mm.4259","NM_008532","ENSMUSG00000045394","Epcam","CD326|EGP|EGP-2|Egp314|Ep-CAM|EpCAM1|GA733-2|Ly74|TROP1|Tacsd1|Tacstd1|gp40","epithelial cell adhesion molecule","protein-coding"]
[1079,"chr11",49202095,49204572,"+",0,"NA","promoter-TSS (NM_001024846)","promoter-TSS (NM_001024846)",-167,"NM_001024846",22720,"Mm.16650","NM_009562","ENSMUSG00000046311","Zfp62","-","zinc finger protein 62","protein-coding"]
[5977,"chr4",149306482,149308455,"+",0,"NA","5' UTR (NM_008441, exon 1 of 21)","5' UTR (NM_008441, exon 1 of 21)",230,"NM_207682",16561,"Mm.402393","NM_008441","ENSMUSG00000063077","Kif1b","A530096N05Rik|AI448212|AI506502|D4Mil1e|KIF1Bp130|KIF1Bp204","kinesin family member 1B","protein-coding"]
[760,"chr10",80576239,80579416,"+",0,"NA","promoter-TSS (NM_078477)","promoter-TSS (NM_078477)",-531,"NM_078477",118445,"Mm.41513","NM_078477","ENSMUSG00000035397","Klf16","AI843742|BTEB4|DRRF","Kruppel-like factor 16","protein-coding"]
[7815,"chr8",33385033,33386710,"+",0,"NA","promoter-TSS (NM_001122822)","promoter-TSS (NM_001122822)",-344,"NM_011721",22427,"Mm.228805","NM_011721","ENSMUSG00000031583","Wrn","AI846146","Werner syndrome homolog (human)","protein-coding"]
[3317,"chr17",20944334,20946578,"+",0,"NA","promoter-TSS (NM_016891)","promoter-TSS (NM_016891)",2,"NM_016891",51792,"Mm.294138","NM_016891","ENSMUSG00000007564","Ppp2r1a","6330556D22Rik|PP2A|PR65","protein phosphatase 2, regulatory subunit A, alpha","protein-coding"]
[7743,"chr8",4252554,4254349,"+",0,"NA","intron (NM_133968, intron 1 of 4)","intron (NM_133968, intron 1 of 4)",349,"NM_133968",102209,"Mm.28452","NM_133968","ENSMUSG00000011837","Snapc2","0610007H10Rik|AU015675","small nuclear RNA activating complex, polypeptide 2","protein-coding"]
[6755,"chr6",55203409,55203731,"+",0,"NA","intron (NM_001142781, intron 1 of 17)","intron (NM_001142781, intron 1 of 17)",187,"NM_001142781",330323,"Mm.268997","NM_177883","ENSMUSG00000038022","Fam188b","C330043M08Rik|Gm1406","family with sequence similarity 188, member B","protein-coding"]
[282,"chr1",127204705,127206395,"+",0,"NA","intron (NM_145128, intron 1 of 17)","CpG",564,"NM_145128",107895,"Mm.214682","NM_145128","ENSMUSG00000036155","Mgat5","4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV","mannoside acetylglucosaminyltransferase 5","protein-coding"]
[989,"chr11",6474917,6476653,"+",0,"NA","exon (NM_011221, exon 1 of 1)","exon (NM_011221, exon 1 of 1)",291,"NM_011221",19291,"Mm.296150","NM_011221","ENSMUSG00000094483","Purb","2310015K15Rik|AA114818|Cager-2|D11Bwg0414e","purine rich element binding protein B","protein-coding"]
[2372,"chr14",24244819,24245955,"+",0,"NA","exon (NM_001163513, exon 1 of 32)","exon (NM_001163513, exon 1 of 32)",533,"NM_001163513",71228,"Mm.68971","NM_027726","ENSMUSG00000021782","Dlg5","4933429D20Rik|T25557|mKIAA0583","discs, large homolog 5 (Drosophila)","protein-coding"]
[4673,"chr2",117342285,117343957,"+",0,"NA","promoter-TSS (NM_011246)","promoter-TSS (NM_011246)",-244,"NM_011246",19419,"Mm.42150","NM_011246","ENSMUSG00000027347","Rasgrp1","Rasgrp","RAS guanyl releasing protein 1","protein-coding"]
[3511,"chr17",34931297,34932175,"+",0,"NA","intron (NM_010893, intron 1 of 5)","intron (NM_010893, intron 1 of 5)",483,"NM_010893",18010,"Mm.8856","NM_010893",null,"Neu1","AA407268|AA407316|Aglp|Apl|Bat-7|Bat7|G9|Map-2|Neu|Neu-1","neuraminidase 1","protein-coding"]
[7305,"chr7",45365674,45367950,"+",0,"NA","promoter-TSS (NR_027802)","promoter-TSS (NR_027802)",207,"NM_029741",76787,"Mm.277235","NM_029741","ENSMUSG00000003863","Ppfia3","2410127E16Rik","protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3","protein-coding"]
[8055,"chr8",94666826,94667323,"+",0,"NA","promoter-TSS (NM_024269)","promoter-TSS (NM_024269)",-17,"NM_024269",107566,"Mm.393247","NM_024191","ENSMUSG00000031776","Arl2bp","1700010P10Rik|1700027H16Rik|6330544B05Rik|AI482273|AI849834|BART|Bart1","ADP-ribosylation factor-like 2 binding protein","protein-coding"]
[5402,"chr3",145987400,145989029,"+",0,"NA","exon (NM_001166064, exon 1 of 7)","exon (NM_001166064, exon 1 of 7)",344,"NM_001166064",214804,"Mm.268854","NM_001166064","ENSMUSG00000036863","Syde2","C430017H16Rik","synapse defective 1, Rho GTPase, homolog 2 (C. elegans)","protein-coding"]
[1187,"chr11",62280524,62282014,"+",0,"NA","promoter-TSS (NM_029704)","promoter-TSS (NM_029704)",126,"NM_027198",69747,"Mm.141150","NM_027198","ENSMUSG00000014243","Zswim7","2410012H22Rik","zinc finger SWIM-type containing 7","protein-coding"]
[8620,"chr9",106280104,106281800,"+",0,"NA","promoter-TSS (NM_027354)","promoter-TSS (NM_027354)",-109,"NM_027354",70235,"Mm.23054","NM_027354","ENSMUSG00000023345","Poc1a","2510040D07Rik|Wdr51a","POC1 centriolar protein homolog A (Chlamydomonas)","protein-coding"]
[879,"chr10",120112385,120113379,"+",0,"NA","promoter-TSS (NM_080446)","promoter-TSS (NM_080446)",83,"NM_080446",117599,"Mm.214703","NM_080446","ENSMUSG00000020228","Helb","AI447783|D10Ertd664e","helicase (DNA) B","protein-coding"]
[3104,"chr16",25798785,25805407,"+",0,"NA","exon (NM_011641, exon 1 of 12)","exon (NM_011641, exon 1 of 12)",180,"NM_001127264",22061,"Mm.20894","NM_011641","ENSMUSG00000022510","Trp63","AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1","transformation related protein 63","protein-coding"]
[8705,"chr9",114843737,114844296,"+",0,"NA","5' UTR (NM_027294, exon 1 of 4)","5' UTR (NM_027294, exon 1 of 4)",136,"NM_027294",70031,"Mm.150064","NM_027294","ENSMUSG00000041012","Cmtm8","2700018N07Rik|AA408515|Cklfsf8","CKLF-like MARVEL transmembrane domain containing 8","protein-coding"]
[1828,"chr12",70937523,70938491,"+",0,"NA","exon (NM_019785, exon 1 of 13)","exon (NM_019785, exon 1 of 13)",150,"NM_019785",56444,"Mm.29317","NM_019785","ENSMUSG00000021076","Actr10","Actr11|Arp11","ARP10 actin-related protein 10","protein-coding"]
[70,"chr1",39899855,39902947,"+",0,"NA","intron (NM_001252200, intron 1 of 31)","CpG",488,"NM_008696",26921,"Mm.491139","NM_008696","ENSMUSG00000026074","Map4k4","9430080K19Rik|AU043147|AU045934|AW046177|HGK|Nik","mitogen-activated protein kinase kinase kinase kinase 4","protein-coding"]
[4352,"chr2",19656675,19660304,"+",0,"NA","promoter-TSS (NR_033642)","promoter-TSS (NR_033642)",427,"NM_027715",71198,"Mm.83981","NM_027715","ENSMUSG00000043415","Otud1","4933428L19Rik","OTU domain containing 1","protein-coding"]
[6728,"chr6",48085885,48086941,"+",0,"NA","5' UTR (NM_001163475, exon 1 of 7)","5' UTR (NM_001163475, exon 1 of 7)",180,"NM_001163475",69228,"Mm.207555","NM_001163475","ENSMUSG00000057691","Zfp746","2810407L07Rik|AI317225|Znf746","zinc finger protein 746","protein-coding"]
[3290,"chr17",6777823,6783758,"+",0,"NA","intron (NM_009510, intron 1 of 12)","intron (NM_009510, intron 1 of 12)",1990,"NM_009510",22350,"Mm.277812","NM_009510","ENSMUSG00000052397","Ezr","AW146364|R75297|Vil2|p81","ezrin","protein-coding"]
[8192,"chr8",121907200,121907602,"+",0,"NA","promoter-TSS (NM_001033485)","promoter-TSS (NM_001033485)",285,"NM_011404",20539,"Mm.22374","NM_011404","ENSMUSG00000040010","Slc7a5","4F2LC|D0H16S474E|LAT1|TA1","solute carrier family 7 (cationic amino acid transporter, y+ system), member 5","protein-coding"]
[7296,"chr7",44895091,44896676,"+",0,"NA","promoter-TSS (NM_027376)","promoter-TSS (NM_027376)",-196,"NM_027376",70300,"Mm.276298","NM_027376","ENSMUSG00000011658","Fuz","2600013E07Rik|b2b1273Clo","fuzzy homolog (Drosophila)","protein-coding"]
[4658,"chr2",112367406,112368593,"+",0,"NA","promoter-TSS (NM_026519)","promoter-TSS (NM_026519)",28,"NM_026519",68032,"Mm.220942","NM_026519","ENSMUSG00000027131","Emc4","2610318K02Rik|Tmem85","ER membrane protein complex subunit 4","protein-coding"]
[3853,"chr18",37854220,37858199,"+",0,"NA","exon (NM_001305980, exon 21 of 28)","exon (NM_001305980, exon 21 of 28)",-1549,"NR_105945",102465592,null,"NR_105945","ENSMUSG00000098706","Mir6979","Gm27524|mmu-mir-6979","microRNA 6979","ncRNA"]
[5201,"chr3",90598868,90601308,"+",0,"NA","promoter-TSS (NM_011310)","promoter-TSS (NM_011310)",-127,"NM_011310",20197,"Mm.440044","NM_011310","ENSMUSG00000001021","S100a3","S100E","S100 calcium binding protein A3","protein-coding"]
[4663,"chr2",113440154,113441581,"+",0,"NA","promoter-TSS (NM_001285459)","promoter-TSS (NM_001285459)",-197,"NM_001285459",14260,"Mm.4938","NM_010230","ENSMUSG00000044042","Fmn1","Fmn|ld","formin 1","protein-coding"]
[7175,"chr7",27485897,27488415,"+",0,"NA","intron (NM_018820, intron 1 of 1)","CpG",203,"NM_018820",55942,"Mm.153684","NM_018820","ENSMUSG00000008384","Sertad1","1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1","SERTA domain containing 1","protein-coding"]
[5547,"chr4",48540011,48541005,"+",0,"NA","promoter-TSS (NM_028137)","promoter-TSS (NM_028137)",9,"NM_028137",66665,"Mm.140749","NM_028137","ENSMUSG00000039693","Msantd3","2410046L14Rik|2810429P03Rik|5730528L13Rik|Mysantd3","Myb/SANT-like DNA-binding domain containing 3","protein-coding"]
[6942,"chr6",121245362,121246030,"+",0,"NA","promoter-TSS (NM_011909)","promoter-TSS (NM_011909)",-210,"NM_011909",24110,"Mm.326911","NM_011909","ENSMUSG00000030107","Usp18","1110058H21Rik|AW047653|UBP43|Ubp15","ubiquitin specific peptidase 18","protein-coding"]
[2266,"chr13",94975835,94976970,"+",0,"NA","promoter-TSS (NM_172590)","promoter-TSS (NM_172590)",58,"NM_172590",218460,"Mm.33856","NM_172590","ENSMUSG00000042015","Wdr41","B830029I03Rik|MSTP048","WD repeat domain 41","protein-coding"]
[7671,"chr7",139247539,139250388,"+",0,"NA","intron (NM_001033206, intron 1 of 2)","CpG",481,"NM_001098636",101631,"Mm.334300","NM_001033206","ENSMUSG00000060260","Pwwp2b","AI594893|D7Ertd517e|D930023J19Rik|Pwwp2","PWWP domain containing 2B","protein-coding"]
[4963,"chr2",172999751,173000905,"+",0,"NA","5' UTR (NM_175112, exon 1 of 12)","5' UTR (NM_175112, exon 1 of 12)",211,"NM_175112",66679,"Mm.4113","NM_175112","ENSMUSG00000027509","Rae1","3230401I12Rik|D2Ertd342e|MNRP|MNRP41","RAE1 RNA export 1 homolog (S. pombe)","protein-coding"]
[722,"chr10",78713825,78720043,"+",0,"NA","intron (NM_009809, intron 1 of 6)","intron (NM_009809, intron 1 of 6)",1359,"NM_009809",12365,"Mm.20940","NM_009809","ENSMUSG00000005355","Casp14","MICE|mini-ICE","caspase 14","protein-coding"]
[4060,"chr19",6140291,6141770,"+",0,"NA","intron (NM_019722, intron 1 of 4)","CpG",107,"NM_019722",56327,"Mm.21071","NM_019722",null,"Arl2","2610009M23Rik|AI115441|AW553335","ADP-ribosylation factor-like 2","protein-coding"]
[153,"chr1",67036945,67039156,"+",0,"NA","intron (NM_001190984, intron 2 of 9)","intron (NM_001190984, intron 2 of 9)",784,"NM_001190984",14768,"Mm.20522","NM_021295","ENSMUSG00000026000","Lancl1","AW124738|Gpr69|Gpr69a|p40","LanC (bacterial lantibiotic synthetase component C)-like 1","protein-coding"]
[101,"chr1",54438527,54438965,"+",0,"NA","intron (NM_001033194, intron 1 of 17)","intron (NM_001033194, intron 1 of 17)",280,"NM_001033194",98488,"Mm.25856","NM_001033194",null,"Gtf3c3","TF3C-gamma|TFIIIC102","general transcription factor IIIC, polypeptide 3","protein-coding"]
[4012,"chr19",4793008,4794407,"+",0,"NA","5' UTR (NM_001290125, exon 1 of 3)","5' UTR (NM_001290125, exon 1 of 3)",194,"NM_009032",19653,"Mm.426069","NM_009032","ENSMUSG00000094936","Rbm4","4921506I22Rik|Lark1|Mlark|Rbm4a|lark","RNA binding motif protein 4","protein-coding"]
[8133,"chr8",109961406,109962141,"+",0,"NA","exon (NM_212447, exon 1 of 3)","exon (NM_212447, exon 1 of 3)",432,"NM_212447",73608,"Mm.86833","NM_028584","ENSMUSG00000001672","Marveld3","1810006A16Rik|AI642133|Marvd3|Mrvldc3","MARVEL (membrane-associating) domain containing 3","protein-coding"]
[3571,"chr17",43568213,43569890,"+",0,"NA","intron (NM_013737, intron 1 of 11)","intron (NM_013737, intron 1 of 11)",600,"NM_013737",27226,"Mm.9277","NM_013737","ENSMUSG00000023913","Pla2g7","R75400","phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)","protein-coding"]
[7345,"chr7",55961781,55963393,"+",0,"NA","promoter-TSS (NM_001256133)","promoter-TSS (NM_001256133)",56,"NR_015495",320845,"Mm.274484","NM_001033396",null,"A230056P14Rik","OTTMUSG00000027345","RIKEN cDNA A230056P14 gene","ncRNA"]
[3879,"chr18",49755290,49756164,"+",0,"NA","promoter-TSS (NM_001170960)","promoter-TSS (NM_001170960)",-126,"NM_001170960",68857,"Mm.96010","NM_026854","ENSMUSG00000024505","Dtwd2","1190002H09Rik|8030470C17Rik|AI414673|BB115449","DTW domain containing 2","protein-coding"]
[2864,"chr15",83555059,83556045,"+",0,"NA","exon (NM_001030014, exon 1 of 4)","exon (NM_001030014, exon 1 of 4)",159,"NM_001030014",223722,"Mm.37560","NM_001030014","ENSMUSG00000048755","Mcat","AI225907|BC025519","malonyl CoA:ACP acyltransferase (mitochondrial)","protein-coding"]
[8671,"chr9",108691131,108692936,"+",0,"NA","promoter-TSS (NM_008924)","promoter-TSS (NM_008924)",-110,"NM_008924",19087,"Mm.253102","NM_008924","ENSMUSG00000032601","Prkar2a","1110061A24Rik|AI317181|AI836829|RII(alpha)","protein kinase, cAMP dependent regulatory, type II alpha","protein-coding"]
[3111,"chr16",29579436,29579729,"+",0,"NA","intron (NM_133752, intron 1 of 28)","CpG",248,"NM_001199177",74143,"Mm.274285","NM_133752","ENSMUSG00000038084","Opa1","1200011N24Rik|AI225888|AI847218|lilr3|mKIAA0567","optic atrophy 1","protein-coding"]
[5251,"chr3",96554456,96559095,"+",0,"NA","intron (NR_040409, intron 3 of 3)","intron (NR_040409, intron 3 of 3)",-1182,"NM_001009935",56338,"Mm.410189","NM_023719","ENSMUSG00000038393","Txnip","1200008J08Rik|AA682105|Hyplip1|THIF|Tbp-2|VDUP1","thioredoxin interacting protein","protein-coding"]
[4353,"chr2",20519273,20521383,"+",0,"NA","intron (NM_178059, intron 2 of 18)","intron (NM_178059, intron 2 of 18)",815,"NM_001177631",208618,"Mm.237935","NM_029895","ENSMUSG00000036617","Etl4","6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt","enhancer trap locus 4","protein-coding"]
[1877,"chr12",81594656,81594943,"+",0,"NA","intron (NM_027213, intron 1 of 7)","intron (NM_027213, intron 1 of 7)",159,"NM_027213",69792,"Mm.279993","NM_027213","ENSMUSG00000002679","Med6","1500012F11Rik|AU019660|AV213303","mediator complex subunit 6","protein-coding"]
[5610,"chr4",89310123,89311969,"+",0,"NA","promoter-TSS (NM_007670)","promoter-TSS (NM_007670)",-14,"NM_007670",12579,"Mm.423094","NM_007670","ENSMUSG00000073802","Cdkn2b","AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b","cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)","protein-coding"]
[3241,"chr16",91372430,91373463,"+",0,"NA","5' UTR (NM_001110498, exon 1 of 7)","5' UTR (NM_001110498, exon 1 of 7)",163,"NM_001110498",15976,"Mm.6834","NM_010509","ENSMUSG00000022971","Ifnar2","AI747302|Ifnar-2","interferon (alpha and beta) receptor 2","protein-coding"]
[7769,"chr8",13890056,13890231,"+",0,"NA","intron (NM_025556, intron 1 of 3)","CpG",128,"NM_025556",66423,"Mm.29063","NM_025556","ENSMUSG00000031458","Coprs","1700029I03Rik|2410022L05Rik|AA409325|AI256813|C85432|Copr5","coordinator of PRMT5, differentiation stimulator","protein-coding"]
[7917,"chr8",70672736,70675132,"+",0,"NA","intron (NM_015816, intron 1 of 4)","intron (NM_015816, intron 1 of 4)",703,"NM_015816",50783,"Mm.248188","NM_015816","ENSMUSG00000031848","Lsm4","-","LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)","protein-coding"]
[2237,"chr13",76098125,76099637,"+",0,"NA","promoter-TSS (NM_029847)","promoter-TSS (NM_029847)",147,"NM_001081352",218343,"Mm.277964","NM_001081352","ENSMUSG00000033991","Ttc37","mKIAA0372","tetratricopeptide repeat domain 37","protein-coding"]
[6855,"chr6",88724202,88725202,"+",0,"NA","promoter-TSS (NM_001166250)","promoter-TSS (NM_001166250)",-2,"NM_001166250",23945,"Mm.272197","NM_011844","ENSMUSG00000033174","Mgll","AA589436|Magl|Mgl","monoglyceride lipase","protein-coding"]
[7677,"chr7",140134612,140138195,"+",0,"NA","Intergenic","PB1D10|SINE|Alu",-1161,"NM_199301",212508,"Mm.296088","NM_199301","ENSMUSG00000039018","Mtg1","Gm169|Gtpbp7","mitochondrial GTPase 1 homolog (S. cerevisiae)","protein-coding"]
[1089,"chr11",50324113,50326309,"+",0,"NA","intron (NM_001110500, intron 1 of 14)","intron (NM_001110500, intron 1 of 14)",462,"NM_001110499",12330,"Mm.248827","NM_007597","ENSMUSG00000020368","Canx","1110069N15Rik|AI988026|Cnx|D11Ertd153e","calnexin","protein-coding"]
[2168,"chr13",56295264,56296921,"+",0,"NA","intron (NM_019568, intron 1 of 3)","CpG",459,"NM_019568",57266,"Mm.30211","NM_019568","ENSMUSG00000021508","Cxcl14","1110031L23Rik|1200006I23Rik|AI414372|BMAC|BRAK|KS1|Kec|MIP-2g|MIP2gamma|NJAC|Scyb14|bolekine","chemokine (C-X-C motif) ligand 14","protein-coding"]
[6852,"chr6",88084022,88085167,"+",0,"NA","exon (NM_133933, exon 1 of 10)","exon (NM_133933, exon 1 of 10)",121,"NM_133933",103963,"Mm.188544","NM_133933","ENSMUSG00000030062","Rpn1","AU018702|D6Wsu137e|Rpn-1","ribophorin I","protein-coding"]
[6457,"chr5",129583932,129584090,"+",0,"NA","promoter-TSS (NM_011846)","promoter-TSS (NM_011846)",-203,"NM_011846",23948,"Mm.42047","NM_011846",null,"Mmp17","MT4-MMP|MT4MMP|MTMMP4","matrix metallopeptidase 17","protein-coding"]
[6951,"chr6",124717107,124720495,"+",0,"NA","promoter-TSS (NR_029554)","promoter-TSS (NR_029554)",-411,"NR_029792",723944,null,"NR_029792","ENSMUSG00000065462","Mir200c","Mirn200c|mir-200c","microRNA 200c","ncRNA"]
[3467,"chr17",32787594,32788301,"+",0,"NA","intron (NM_172458, intron 1 of 3)","CpG",340,"NM_172458",208292,"Mm.38813","NM_172458",null,"Zfp871","4732483N19|9030612M13Rik|AI118577|AI265322|mKIAA3006","zinc finger protein 871","protein-coding"]
[1197,"chr11",64978511,64979731,"+",0,"NA","promoter-TSS (NM_023479)","promoter-TSS (NM_023479)",86,"NM_023479",68626,"Mm.157711","NM_023479","ENSMUSG00000020549","Elac2","1110017O07Rik|D11Wsu80e|Hpc2","elaC homolog 2 (E. coli)","protein-coding"]
[4604,"chr2",91236349,91237862,"+",0,"NA","promoter-TSS (NR_015464)","promoter-TSS (NR_015464)",-39,"NM_028119",107986,"Mm.389334","NM_028119","ENSMUSG00000002109","Ddb2","2610043A19Rik","damage specific DNA binding protein 2","protein-coding"]
[7314,"chr7",45616199,45618734,"+",0,"NA","promoter-TSS (NM_001271981)","promoter-TSS (NM_001271981)",-140,"NM_001271981",14343,"Mm.56933","NM_008051","ENSMUSG00000008461","Fut1","-","fucosyltransferase 1","protein-coding"]
[7635,"chr7",128236800,128239502,"+",0,"NA","promoter-TSS (NM_177001)","promoter-TSS (NM_177001)",-120,"NM_177001",100043133,"Mm.183647","NM_177001","ENSMUSG00000062944","9130023H24Rik","GLI4","RIKEN cDNA 9130023H24 gene","protein-coding"]
[3027,"chr16",13455524,13455813,"+",0,"NA","Intergenic","Intergenic",1828,"NR_029855",723899,null,"NR_029855","ENSMUSG00000065449","Mir365-1","Mirn365-1|mir-365-1","microRNA 365-1","ncRNA"]
[8506,"chr9",69287990,69291938,"+",0,"NA","5' UTR (NM_001289916, exon 1 of 10)","5' UTR (NM_001289916, exon 1 of 10)",123,"NM_001289916",19883,"Mm.378450","NM_013646","ENSMUSG00000032238","Rora","9530021D13Rik|Nr1f1|ROR1|ROR2|ROR3|nmf267|sg|staggerer|tmgc26","RAR-related orphan receptor alpha","protein-coding"]
[8148,"chr8",111521541,111522627,"+",0,"NA","promoter-TSS (NM_001170743)","promoter-TSS (NM_001170743)",23,"NM_001170742",319481,"Mm.247294","NM_176923","ENSMUSG00000031959","Wdr59","5430401O09Rik|Cdw12","WD repeat domain 59","protein-coding"]
[1758,"chr12",31654275,31655873,"+",0,"NA","promoter-TSS (NM_028002)","promoter-TSS (NM_028002)",205,"NM_001163126",238123,"Mm.173068","NM_001163126","ENSMUSG00000035933","Cog5","5430405C01Rik|C87247|D18362|GOLTC1|GTC90","component of oligomeric golgi complex 5","protein-coding"]
[6762,"chr6",57534339,57536235,"+",0,"NA","5' UTR (NM_175523, exon 1 of 7)","5' UTR (NM_175523, exon 1 of 7)",139,"NM_175523",243382,"Mm.396893","NM_175523","ENSMUSG00000037826","Ppm1k","2900063A19Rik|A930026L03Rik|PP2Cm","protein phosphatase 1K (PP2C domain containing)","protein-coding"]
[5512,"chr4",43030529,43031717,"+",0,"NA","intron (NM_023231, intron 1 of 9)","CpG-9849",261,"NM_023231",66592,"Mm.331565","NM_023231","ENSMUSG00000028455","Stoml2","0610038F01Rik|MSLP2|SLP-2","stomatin (Epb7.2)-like 2","protein-coding"]
[4506,"chr2",39064800,39066133,"+",0,"NA","promoter-TSS (NR_110968)","promoter-TSS (NR_110968)",75,"NR_110968",76899,"Mm.131098","NM_029793","ENSMUSG00000026754","Golga1","0710001G09Rik|2210418B03Rik|AW107649|Golgi97|awag|golgin-97","golgi autoantigen, golgin subfamily a, 1","protein-coding"]
[4113,"chr19",8978474,9002231,"+",0,"NA","intron (NM_009643, intron 1 of 4)","intron (NM_009643, intron 1 of 4)",1068,"NM_001286518",66395,"Mm.203866","NM_009643","ENSMUSG00000069833","Ahnak","DY6","AHNAK nucleoprotein (desmoyokin)","protein-coding"]
[2108,"chr13",43477514,43482189,"+",0,"NA","intron (NM_019930, intron 1 of 13)","intron (NM_019930, intron 1 of 13)",1122,"NM_019930",56705,"Mm.148781","NM_019930","ENSMUSG00000038546","Ranbp9","IBAP-1|Ibap1|RanBPM","RAN binding protein 9","protein-coding"]
[888,"chr10",121739194,121740364,"+",0,"NA","promoter-TSS (NM_173022)","promoter-TSS (NM_173022)",-158,"NM_173022",270802,"Mm.209172","NM_173022","ENSMUSG00000053684","BC048403","E030027L10","cDNA sequence BC048403","protein-coding"]
[7541,"chr7",116197692,116198873,"+",0,"NA","intron (NM_001305185, intron 3 of 26)","intron (NM_001305185, intron 3 of 26)",279,"NM_001305189",233765,"Mm.3741","NM_172743","ENSMUSG00000045659","Plekha7","A430081P20Rik|AI414265","pleckstrin homology domain containing, family A member 7","protein-coding"]
[1161,"chr11",59847737,59848506,"+",0,"NA","promoter-TSS (NM_134029)","promoter-TSS (NM_134029)",48,"NM_134029",103850,"Mm.41761","NM_134029","ENSMUSG00000032615","Nt5m","2010013E09Rik|AI846937|dNT-2","5',3'-nucleotidase, mitochondrial","protein-coding"]
[3406,"chr17",26972528,26973760,"+",0,"NA","promoter-TSS (NM_001005916)","promoter-TSS (NM_001005916)",-35,"NM_001005916",474156,"Mm.328890","NM_001005916","ENSMUSG00000079605","Zbtb9","3930402F13Rik","zinc finger and BTB domain containing 9","protein-coding"]
[4772,"chr2",130663995,130664648,"+",0,"NA","intron (NM_029832, intron 1 of 8)","CpG",324,"NM_029832",77006,"Mm.440063","NM_029832","ENSMUSG00000068290","Ddrgk1","1110001I20Rik|2600009E05Rik|AI326138|Ufbp1","DDRGK domain containing 1","protein-coding"]
[3364,"chr17",24723143,24724365,"+",0,"NA","intron (NM_026684, intron 1 of 3)","B1_Mus1|SINE|Alu",634,"NM_026684",68342,"Mm.1129","NM_026684","ENSMUSG00000040048","Ndufb10","0610011B04Rik|22kDa|PDSW","NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10","protein-coding"]
[3251,"chr16",91930825,91932008,"+",0,"NA","intron (NM_138597, intron 1 of 6)","CpG",214,"NM_138597",28080,"Mm.41","NM_138597","ENSMUSG00000022956","Atp5o","ATPO|D12Wsu28e|OSCP","ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit","protein-coding"]
[860,"chr10",112928329,112929238,"+",0,"NA","5' UTR (NM_001033474, exon 1 of 1)","5' UTR (NM_001033474, exon 1 of 1)",243,"NM_001033474",382423,"Mm.431239","NM_001033474","ENSMUSG00000074748","Atxn7l3b","4921506J03Rik|6230409E21Rik|AI315132|ENSMUSG00000074747","ataxin 7-like 3B","protein-coding"]
[1063,"chr11",40754116,40755264,"+",0,"NA","intron (NM_009831, intron 1 of 5)","intron (NM_009831, intron 1 of 5)",596,"NM_009831",12450,"Mm.2103","NM_009831","ENSMUSG00000020326","Ccng1","AI314029","cyclin G1","protein-coding"]
[7113,"chr7",19382321,19382781,"+",0,"NA","intron (NM_007949, intron 2 of 22)","intron (NM_007949, intron 2 of 22)",512,"NM_007949",13871,"Mm.36524","NM_007949","ENSMUSG00000030400","Ercc2","AA407812|AU020867|AW240756|CXPD|Ercc-2|Mhdarco15|XPD","excision repair cross-complementing rodent repair deficiency, complementation group 2","protein-coding"]
[3047,"chr16",16982950,16984313,"+",0,"NA","exon (NM_001038663, exon 1 of 8)","exon (NM_001038663, exon 1 of 8)",249,"NM_001038663",26413,"Mm.196581","NM_011949","ENSMUSG00000063358","Mapk1","9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk","mitogen-activated protein kinase 1","protein-coding"]
[2362,"chr14",20702041,20703468,"+",0,"NA","promoter-TSS (NM_025366)","promoter-TSS (NM_025366)",-273,"NM_025366",66121,"Mm.246996","NM_025366","ENSMUSG00000063787","Chchd1","1110001O19Rik|2400010G13Rik|MRP-S37","coiled-coil-helix-coiled-coil-helix domain containing 1","protein-coding"]
[8932,"chrX",136741838,136743292,"+",0,"NA","promoter-TSS (NR_033324)","promoter-TSS (NR_033324)",353,"NM_001168227",56397,"Mm.27218","NM_019768","ENSMUSG00000031422","Morf4l2","2410017O14Rik|Mrgx|Sid393p|mKIAA0026","mortality factor 4 like 2","protein-coding"]
[2142,"chr13",52979498,52982565,"+",0,"NA","promoter-TSS (NM_017373)","promoter-TSS (NM_017373)",8,"NM_017373",18030,"Mm.136604","NM_017373","ENSMUSG00000056749","Nfil3","AV225605|E4BP4","nuclear factor, interleukin 3, regulated","protein-coding"]
[2733,"chr15",59373825,59374927,"+",0,"NA","promoter-TSS (NM_153548)","promoter-TSS (NM_153548)",178,"NM_001164604",68501,"Mm.27762","NM_026746","ENSMUSG00000059586","Nsmce2","1110014D18Rik|AI661537","non-SMC element 2 homolog (MMS21, S. cerevisiae)","protein-coding"]
[7310,"chr7",45509669,45510741,"+",0,"NA","intron (NM_001163662, intron 1 of 12)","CpG",203,"NM_008749",18220,"Mm.258923","NM_008749","ENSMUSG00000030824","Nucb1","B230337F23Rik|C77483|Calnuc|MTEST82|Nucb","nucleobindin 1","protein-coding"]
[7108,"chr7",19148644,19150257,"+",0,"NA","promoter-TSS (NM_026111)","promoter-TSS (NM_026111)",-254,"NM_026111",67369,"Mm.234876","NM_026111","ENSMUSG00000030407","Qpctl","1810019P04Rik|BB101812|gQC","glutaminyl-peptide cyclotransferase-like","protein-coding"]
[2436,"chr14",47297906,47299513,"+",0,"NA","intron (NM_178684, intron 1 of 3)","intron (NM_178684, intron 1 of 3)",395,"NM_178684",218975,"Mm.212297","NM_178684","ENSMUSG00000021840","Mapk1ip1l","9130202B12|C130032J12Rik","mitogen-activated protein kinase 1 interacting protein 1-like","protein-coding"]
[4019,"chr19",5038943,5039519,"+",0,"NA","exon (NM_175383, exon 1 of 2)","exon (NM_175383, exon 1 of 2)",405,"NM_175383",108902,"Mm.491160","NM_175383","ENSMUSG00000047379","B4gat1","1500032M01Rik|B3gnt1|B3gnt6|BETA3GNT1|iGAT|iGNT","beta-1,4-glucuronyltransferase 1","protein-coding"]
[7354,"chr7",64872058,64872992,"+",0,"NA","exon (NM_023239, exon 1 of 1)","exon (NM_023239, exon 1 of 1)",515,"NM_023239",66647,"Mm.19944","NM_023239",null,"Ndnl2","5730494G16Rik|AI642138|BB044375|HCA4|Mageg1|mage-g1","necdin-like 2","protein-coding"]
[8551,"chr9",83145728,83146419,"+",0,"NA","intron (NM_175074, intron 1 of 5)","CpG",534,"NM_175074",94353,"Mm.244426","NM_026122","ENSMUSG00000066456","Hmgn3","1110002A15Rik|6330514M13Rik|BB071015|TRIP7","high mobility group nucleosomal binding domain 3","protein-coding"]
[6985,"chr6",129532366,129533723,"+",0,"NA","promoter-TSS (NM_020590)","promoter-TSS (NM_020590)",-148,"NM_020590",57436,"Mm.14638","NM_020590","ENSMUSG00000030161","Gabarapl1","3110025G09Rik|9130422N19Rik|AI196471|Apg8l|Atg8l|GECI|MNCb-0091","gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1","protein-coding"]
[566,"chr10",22148224,22149314,"+",0,"NA","exon (NM_001254745, exon 1 of 2)","exon (NM_001254745, exon 1 of 2)",501,"NM_001254744",319887,"Mm.177746","NM_001254744","ENSMUSG00000097327","E030030I06Rik","-","RIKEN cDNA E030030I06 gene","protein-coding"]
[4067,"chr19",6334129,6336096,"+",0,"NA","promoter-TSS (NM_001168489)","promoter-TSS (NM_001168489)",73,"NM_008583",17283,"Mm.12917","NM_008583","ENSMUSG00000024947","Men1","AW045611","multiple endocrine neoplasia 1","protein-coding"]
[108,"chr1",55236173,55237929,"+",0,"NA","promoter-TSS (NM_175439)","promoter-TSS (NM_175439)",-126,"NM_175439",212679,"Mm.19223","NM_175439",null,"Mars2","C730026E21Rik|MetRS","methionine-tRNA synthetase 2 (mitochondrial)","protein-coding"]
[2820,"chr15",79326399,79328768,"+",0,"NA","intron (NM_016915, intron 1 of 15)","intron (NM_016915, intron 1 of 15)",788,"NM_016915",53357,"Mm.155620","NM_016915","ENSMUSG00000042632","Pla2g6","BB112799|PNPLA9|iPLA(2)beta|iPLA2|iPLA2beta","phospholipase A2, group VI","protein-coding"]
[2623,"chr14",120273304,120274150,"+",0,"NA","Intergenic","Intergenic",-1942,"NM_207515",105559,"Mm.238266","NM_175341","ENSMUSG00000022139","Mbnl2","1110002M11Rik|AI047808|AI837313|AI849185|AL118326|MBLL|R75232|mKIAA4072","muscleblind-like 2","protein-coding"]
[5734,"chr4",119173270,119174141,"+",0,"NA","5' UTR (NM_001145935, exon 1 of 2)","5' UTR (NM_001145935, exon 1 of 2)",151,"NM_001145935",195522,"Mm.169620","NM_183140","ENSMUSG00000045268","Zfp691","6430544H17Rik|Znf691","zinc finger protein 691","protein-coding"]
[3160,"chr16",38452255,38453295,"+",0,"NA","promoter-TSS (NM_007414)","promoter-TSS (NM_007414)",-86,"NM_007414",11544,"Mm.20047","NM_007414","ENSMUSG00000002844","Adprh","Arh1","ADP-ribosylarginine hydrolase","protein-coding"]
[3082,"chr16",20610357,20612100,"+",0,"NA","promoter-TSS (NM_177941)","promoter-TSS (NM_177941)",-373,"NM_177940",107522,"Mm.263319","NM_025462","ENSMUSG00000022842","Ece2","1810009K13Rik|6330509A19Rik|9630025D12Rik|BB127715|Ece-2","endothelin converting enzyme 2","protein-coding"]
[7872,"chr8",61487715,61488323,"+",0,"NA","intron (NM_145595, intron 1 of 4)","CpG",285,"NM_145595",234309,"Mm.29059","NM_145595","ENSMUSG00000031641","Cbr4","A730083J17Rik|BC009118","carbonyl reductase 4","protein-coding"]
[3506,"chr17",34647273,34647688,"+",0,"NA","intron (NM_017406, intron 1 of 17)","CpG",334,"NM_017406",12915,"Mm.4068","NM_017406","ENSMUSG00000015461","Atf6b","AA617266|ATF6beta|Creb-rp|Crebl1","activating transcription factor 6 beta","protein-coding"]
[375,"chr1",161130957,161131792,"+",0,"NA","5' UTR (NM_001039482, exon 1 of 12)","5' UTR (NM_001039482, exon 1 of 12)",105,"NM_001039482",226541,"Mm.255165","NM_144876","ENSMUSG00000026705","Klhl20","AI504637|D930050H05Rik|Kleip|mKIAA4210","kelch-like 20","protein-coding"]
[5774,"chr4",126096705,126097164,"+",0,"NA","intron (NM_138721, intron 1 of 1)","intron (NM_138721, intron 1 of 1)",281,"NM_138721",116748,"Mm.41865","NM_138721","ENSMUSG00000050188","Lsm10","-","U7 snRNP-specific Sm-like protein LSM10","protein-coding"]
[4189,"chr19",34289811,34293025,"+",0,"NA","intron (NM_001146708, intron 1 of 2)","intron (NM_001146708, intron 1 of 2)",759,"NM_001146708",14102,"Mm.1626","NM_007987","ENSMUSG00000024778","Fas","AI196731|APO1|APT1|CD95|TNFR6|Tnfrsf6|lpr","Fas (TNF receptor superfamily member 6)","protein-coding"]
[2650,"chr15",9435519,9436455,"+",0,"NA","promoter-TSS (NM_029341)","promoter-TSS (NM_029341)",-41,"NM_029341",75568,"Mm.82143","NM_029341","ENSMUSG00000039676","Capsl","1700028N11Rik|AW125205","calcyphosine-like","protein-coding"]
[7726,"chr7",145283522,145284877,"+",0,"NA","promoter-TSS (NM_146206)","promoter-TSS (NM_146206)",-188,"NR_132642",233979,"Mm.102235","NM_146206","ENSMUSG00000048677","Tpcn2","D830047E22Rik|Gm35086","two pore segment channel 2","protein-coding"]
[1156,"chr11",59505421,59506920,"+",0,"NA","non-coding (NR_015585, exon 1 of 5)","non-coding (NR_015585, exon 1 of 5)",470,"NM_001291014",268417,"Mm.239793","NM_172941","ENSMUSG00000020472","Zkscan17","Nizp1|Zfp496|Znf496","zinc finger with KRAB and SCAN domains 17","protein-coding"]
[5023,"chr3",19509527,19509716,"+",0,"NA","intron (NM_025489, intron 1 of 4)","intron (NM_025489, intron 1 of 4)",1026,"NM_025489",66326,"Mm.45615","NM_025489","ENSMUSG00000027606","Dnajc5b","1700008A05Rik","DnaJ (Hsp40) homolog, subfamily C, member 5 beta","protein-coding"]
[7295,"chr7",44891249,44893342,"+",0,"NA","promoter-TSS (NM_029365)","promoter-TSS (NM_029365)",71,"NM_029365",75613,"Mm.157778","NM_029365","ENSMUSG00000002968","Med25","2610034E13Rik|2610529E18Rik|ESTM2","mediator complex subunit 25","protein-coding"]
[4533,"chr2",61592381,61594299,"+",0,"NA","intron (NM_001164072, intron 1 of 7)","CpG",243,"NM_001164071",21353,"Mm.244393","NM_011529","ENSMUSG00000064289","Tank","C86182|E430026L09Rik|I-TRAF","TRAF family member-associated Nf-kappa B activator","protein-coding"]
[3820,"chr18",34220341,34222034,"+",0,"NA","5' UTR (NM_007462, exon 1 of 16)","5' UTR (NM_007462, exon 1 of 16)",203,"NM_007462",11789,"Mm.384171","NM_007462","ENSMUSG00000005871","Apc","AI047805|AU020952|AW124434|CC1|Min|mAPC","adenomatosis polyposis coli","protein-coding"]
[3660,"chr17",57032274,57032858,"+",0,"NA","TTS (NM_175333)","TTS (NM_175333)",-1059,"NM_010613",16549,"Mm.34296","NM_010613","ENSMUSG00000007670","Khsrp","6330409F21Rik|Fbp2|Fubp2|Ksrp","KH-type splicing regulatory protein","protein-coding"]
[3307,"chr17",15396258,15396856,"+",0,"NA","non-coding (NR_033586, exon 1 of 11)","non-coding (NR_033586, exon 1 of 11)",311,"NM_024203",67544,"Mm.35039","NM_024203","ENSMUSG00000014763","Fam120b","4932442K08Rik|AW049283|AW413338|CCPG|Pgcc1|mKIAA1838","family with sequence similarity 120, member B","protein-coding"]
[6133,"chr5",33104413,33105784,"+",0,"NA","intron (NM_019810, intron 1 of 14)","intron (NM_019810, intron 1 of 14)",879,"NM_019810",20537,"Mm.25237","NM_019810","ENSMUSG00000011034","Slc5a1","Sglt1","solute carrier family 5 (sodium/glucose cotransporter), member 1","protein-coding"]
[2827,"chr15",79689957,79691482,"+",0,"NA","promoter-TSS (NM_013818)","promoter-TSS (NM_013818)",-177,"NM_013818",14904,"Mm.19080","NM_013818","ENSMUSG00000042535","Gtpbp1","AL022987|AW045683|C85212|GP-1|Gtpbp","GTP binding protein 1","protein-coding"]
[2641,"chr15",6707375,6709752,"+",0,"NA","intron (NM_030168, intron 1 of 37)","CpG",182,"NM_030168",78757,"Mm.275811","NM_030168","ENSMUSG00000050310","Rictor","4921505C17Rik|6030405M08Rik|AVO3|AW492497|D530039E11Rik","RPTOR independent companion of MTOR, complex 2","protein-coding"]
[3007,"chr16",8829022,8831777,"+",0,"NA","5' UTR (NM_001081400, exon 1 of 4)","5' UTR (NM_001081400, exon 1 of 4)",299,"NM_001081400",69053,"Mm.390868","NM_001081400","ENSMUSG00000022507","1810013L24Rik","1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903","RIKEN cDNA 1810013L24 gene","protein-coding"]
[8238,"chr9",5298176,5299389,"+",0,"NA","intron (NM_009807, intron 1 of 9)","intron (NM_009807, intron 1 of 9)",265,"NM_009807",12362,"Mm.1051","NM_009807","ENSMUSG00000025888","Casp1","ICE|Il1bc","caspase 1","protein-coding"]
[2245,"chr13",81782783,81785072,"+",0,"NA","intron (NM_007684, intron 1 of 4)","CpG",635,"NM_007684",12626,"Mm.12481","NM_007684","ENSMUSG00000021537","Cetn3","MmCEN3","centrin 3","protein-coding"]
[2550,"chr14",67932769,67934207,"+",0,"NA","promoter-TSS (NM_177780)","promoter-TSS (NM_177780)",84,"NM_177780",68813,"Mm.258155","NM_177780","ENSMUSG00000044447","Dock5","1110060D06Rik|AI666732|AI956923|BC016533|E130320D18|lr2|rlc","dedicator of cytokinesis 5","protein-coding"]
[913,"chr10",127665228,127669451,"+",0,"NA","promoter-TSS (NM_001122895)","promoter-TSS (NM_001122895)",216,"NR_045171",72243,"Mm.482902","NR_045171","ENSMUSG00000040195","1700012D01Rik","-","RIKEN cDNA 1700012D01 gene","ncRNA"]
[2468,"chr14",54463415,54465293,"+",0,"NA","5' UTR (NM_022993, exon 1 of 7)","5' UTR (NM_022993, exon 1 of 7)",207,"NM_022993",65107,"Mm.472719","NM_022993",null,"Lrp10","Lrp9","low-density lipoprotein receptor-related protein 10","protein-coding"]
[4436,"chr2",30236708,30238397,"+",0,"NA","promoter-TSS (NR_028299)","promoter-TSS (NR_028299)",79,"NR_028299",67350,"Mm.402683","NR_028299",null,"1700084E18Rik","-","RIKEN cDNA 1700084E18 gene","ncRNA"]
[5279,"chr3",103170754,103172861,"+",0,"NA","promoter-TSS (NM_026602)","promoter-TSS (NM_026602)",96,"NM_026602",68183,"Mm.104919","NM_026602","ENSMUSG00000005687","Bcas2","6430539P16Rik|AI132645|C76366|C80030","breast carcinoma amplified sequence 2","protein-coding"]
[8958,"chrX",155215532,155216930,"+",0,"NA","5' UTR (NM_009121, exon 1 of 6)","5' UTR (NM_009121, exon 1 of 6)",218,"NM_009121",20229,"Mm.2734","NM_009121","ENSMUSG00000025283","Sat1","AA617398|SSAT|Sat","spermidine/spermine N1-acetyl transferase 1","protein-coding"]
[5908,"chr4",136610448,136610601,"+",0,"NA","promoter-TSS (NM_026300)","promoter-TSS (NM_026300)",87,"NM_026300",67663,"Mm.158168","NM_026300","ENSMUSG00000036921","4930549C01Rik","-","RIKEN cDNA 4930549C01 gene","protein-coding"]
[1467,"chr11",98585201,98589274,"+",0,"NA","promoter-TSS (NM_025661)","promoter-TSS (NM_025661)",8,"NM_025661",66612,"Mm.180546","NM_025661","ENSMUSG00000038150","Ormdl3","2810011N17Rik|AI315223","ORM1-like 3 (S. cerevisiae)","protein-coding"]
[1462,"chr11",98400208,98401153,"+",0,"NA","promoter-TSS (NM_001033537)","promoter-TSS (NM_001033537)",-190,"NM_001033537",320655,"Mm.86519","NM_001033537","ENSMUSG00000038208","Pgap3","CAB2|D430035D22Rik|Perld1","post-GPI attachment to proteins 3","protein-coding"]
[4752,"chr2",128126897,128128210,"+",0,"NA","promoter-TSS (NM_001284410)","promoter-TSS (NM_001284410)",-22,"NM_001284410",12125,"Mm.141083","NM_009754","ENSMUSG00000027381","Bcl2l11","1500006F24Rik|Bim|Bod|bcl2-L-11","BCL2-like 11 (apoptosis facilitator)","protein-coding"]
[1623,"chr11",116083500,116087847,"+",0,"NA","intron (NM_016852, intron 1 of 7)","intron (NM_016852, intron 1 of 7)",1291,"NM_016852",22378,"Mm.284792","NM_016852","ENSMUSG00000034341","Wbp2","-","WW domain binding protein 2","protein-coding"]
[890,"chr10",122096290,122097905,"+",0,"NA","promoter-TSS (NM_153059)","promoter-TSS (NM_153059)",5,"NM_153059",216395,"Mm.236764","NM_153059",null,"Tmem5","6330415D21Rik","transmembrane protein 5","protein-coding"]
[1694,"chr11",120990086,120991996,"+",0,"NA","5' UTR (NM_139059, exon 1 of 9)","5' UTR (NM_139059, exon 1 of 9)",292,"NM_139059",104318,"Mm.216227","NM_027874","ENSMUSG00000025162","Csnk1d","1200006A05Rik|AA409348|D930010H05Rik","casein kinase 1, delta","protein-coding"]
[7321,"chr7",45813456,45814314,"+",0,"NA","intron (NM_011181, intron 1 of 11)","CpG",431,"NM_011181",19158,"Mm.272130","NM_011181","ENSMUSG00000003269","Cyth2","ARNO|CLM2|Pscd2","cytohesin 2","protein-coding"]
[7069,"chr7",12818454,12818817,"+",0,"NA","intron (NM_026046, intron 1 of 1)","CpG",225,"NM_026046",67230,"Mm.333574","NM_026046","ENSMUSG00000057894","Zfp329","2810439M05Rik|4632409L22Rik|ZNF329","zinc finger protein 329","protein-coding"]
[481,"chr1",185203059,185205649,"+",0,"NA","intron (NM_001163754, intron 1 of 34)","CpG",186,"NM_001163754",98732,"Mm.275841","NM_172649","ENSMUSG00000039318","Rab3gap2","1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839","RAB3 GTPase activating protein subunit 2","protein-coding"]
[7187,"chr7",28168630,28170853,"+",0,"NA","promoter-TSS (NM_007991)","promoter-TSS (NM_007991)",-7,"NM_007991",14113,"Mm.4595","NM_007991","ENSMUSG00000046865","Fbl","AL022665|FIB|FLRN|RNU3IP1","fibrillarin","protein-coding"]
[315,"chr1",134559470,134561225,"+",0,"NA","exon (NM_152895, exon 1 of 27)","exon (NM_152895, exon 1 of 27)",169,"NM_152895",75605,"Mm.28995","NM_152895",null,"Kdm5b","2010009J12Rik|2210016I17Rik|AW556288|D1Ertd202e|Jarid1b|PLU-1|PUT1|Plu1|RBBP2H1A|Rb-Bp2|mKIAA4034","lysine (K)-specific demethylase 5B","protein-coding"]
[2270,"chr13",96387958,96388930,"+",0,"NA","5' UTR (NM_026173, exon 1 of 13)","5' UTR (NM_026173, exon 1 of 13)",150,"NM_026173",67463,"Mm.86472","NM_026173","ENSMUSG00000021671","Poc5","1200014M14Rik|AV144706","POC5 centriolar protein homolog (Chlamydomonas)","protein-coding"]
[6828,"chr6",85960652,85962351,"+",0,"NA","exon (NM_028099, exon 1 of 9)","exon (NM_028099, exon 1 of 9)",166,"NM_028099",72102,"Mm.24007","NM_028099","ENSMUSG00000030002","Dusp11","2010300F21Rik|AI481497","dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)","protein-coding"]
[2648,"chr15",9070420,9072674,"+",0,"NA","exon (NM_001085410, exon 1 of 14)","exon (NM_001085410, exon 1 of 14)",287,"NM_001040395",68646,"Mm.244226","NM_001040395","ENSMUSG00000022253","Nadk2","MNADK|Nadkd1","NAD kinase 2, mitochondrial","protein-coding"]
[5314,"chr3",108561787,108563452,"+",0,"NA","promoter-TSS (NM_026198)","promoter-TSS (NM_026198)",-153,"NM_026198",67495,"Mm.32615","NM_026198","ENSMUSG00000068732","Tmem167b","2010200O16Rik","transmembrane protein 167B","protein-coding"]
[1851,"chr12",76532824,76535973,"+",0,"NA","intron (NM_153804, intron 1 of 18)","intron (NM_153804, intron 1 of 18)",838,"NM_153804",263406,"Mm.291854","NM_153804","ENSMUSG00000052609","Plekhg3","BC030417","pleckstrin homology domain containing, family G (with RhoGef domain) member 3","protein-coding"]
[3327,"chr17",22817390,22817763,"+",0,"NA","non-coding (NR_030709, exon 1 of 5)","non-coding (NR_030709, exon 1 of 5)",171,"NR_030709",100042679,"Mm.484007","NR_030709",null,"Gm16386","EG545191|ENSMUSG00000073442|Gm21017","zinc finger protein 946 pseudogene","pseudo"]
[5302,"chr3",107895413,107896713,"+",0,"NA","non-coding (NR_015459, exon 1 of 3)","non-coding (NR_015459, exon 1 of 3)",150,"NR_015459",329735,"Mm.270500","NM_177858","ENSMUSG00000086968","4933431E20Rik","-","RIKEN cDNA 4933431E20 gene","ncRNA"]
[3954,"chr18",76943638,76944716,"+",0,"NA","promoter-TSS (NM_001039202)","promoter-TSS (NM_001039202)",62,"NM_001039202",76987,"Mm.236127","NM_029826","ENSMUSG00000025421","Hdhd2","0610039H12Rik|3110052N05Rik","haloacid dehalogenase-like hydrolase domain containing 2","protein-coding"]
[3896,"chr18",58659117,58660396,"+",0,"NA","exon (NM_025478, exon 1 of 5)","exon (NM_025478, exon 1 of 5)",274,"NM_025478",66307,"Mm.182574","NM_025478","ENSMUSG00000024601","Isoc1","2610034N03Rik","isochorismatase domain containing 1","protein-coding"]
[1007,"chr11",19018119,19021103,"+",0,"NA","promoter-TSS (NM_001193271)","promoter-TSS (NM_001193271)",-642,"NM_010789",17268,"Mm.356578","NM_010789","ENSMUSG00000020160","Meis1","C530044H18Rik|Evi8","Meis homeobox 1","protein-coding"]
[1186,"chr11",62076321,62077730,"+",0,"NA","promoter-TSS (NM_001029936)","promoter-TSS (NM_001029936)",1,"NM_001029936",432572,"Mm.438022","NM_001029936","ENSMUSG00000042331","Specc1","2810012G08Rik|B230396K10Rik|Cytsb","sperm antigen with calponin homology and coiled-coil domains 1","protein-coding"]
[2240,"chr13",80882487,80887810,"+",0,"NA","intron (NM_001042591, intron 1 of 7)","intron (NM_001042591, intron 1 of 7)",1726,"NM_001042591",105171,"Mm.423137","NM_001042591","ENSMUSG00000074794","Arrdc3","AI450344|mKIAA1376","arrestin domain containing 3","protein-coding"]
[7748,"chr8",8689079,8690514,"+",0,"NA","TTS (NR_106114)","TTS (NR_106114)",366,"NR_106114",102465762,null,"NR_106114","ENSMUSG00000098917","Mir7654","Gm27748|mmu-mir-7654","microRNA 7654","ncRNA"]
[7930,"chr8",71380589,71382453,"+",0,"NA","5' UTR (NM_010150, exon 1 of 4)","5' UTR (NM_010150, exon 1 of 4)",431,"NM_010150",13864,"Mm.28989","NM_010150","ENSMUSG00000002393","Nr2f6","AV090102|COUP-TF3|EAR2|Erbal2","nuclear receptor subfamily 2, group F, member 6","protein-coding"]
[908,"chr10",127311050,127312423,"+",0,"NA","promoter-TSS (NM_001171582)","promoter-TSS (NM_001171582)",50,"NM_001003913",216443,"Mm.28173","NM_001003913","ENSMUSG00000040354","Mars","Metrs|Mtrns","methionine-tRNA synthetase","protein-coding"]
[4151,"chr19",23758407,23758697,"+",0,"NA","promoter-TSS (NM_177034)","promoter-TSS (NM_177034)",-324,"NM_177034",319924,"Mm.22879","NM_177034","ENSMUSG00000024897","Apba1","6430513E09Rik|Lin-10|Mint|Mint1|Urop11|X11|X11alpha","amyloid beta (A4) precursor protein binding, family A, member 1","protein-coding"]
[3927,"chr18",67288675,67290033,"+",0,"NA","5' UTR (NM_053261, exon 1 of 8)","5' UTR (NM_053261, exon 1 of 8)",131,"NM_053261",114663,"Mm.34079","NM_053261","ENSMUSG00000024525","Impa2","2210415D20Rik|AI326924|AW259601","inositol (myo)-1(or 4)-monophosphatase 2","protein-coding"]
[8286,"chr9",21236975,21239255,"+",0,"NA","5' UTR (NM_016679, exon 1 of 5)","5' UTR (NM_016679, exon 1 of 5)",1217,"NM_016679",50868,"Mm.248266","NM_016679","ENSMUSG00000003308","Keap1","INRF2|mKIAA0132","kelch-like ECH-associated protein 1","protein-coding"]
[3891,"chr18",56707250,56709396,"+",0,"NA","exon (NM_010721, exon 1 of 11)","exon (NM_010721, exon 1 of 11)",510,"NM_010721",16906,"Mm.4105","NM_010721","ENSMUSG00000024590","Lmnb1","-","lamin B1","protein-coding"]
[5997,"chr4",152027151,152027603,"+",0,"NA","TTS (NM_031867)","TTS (NM_031867)",294,"NM_133879",100090,"Mm.24661","NM_133879","ENSMUSG00000028952","Zbtb48","0610011D15Rik|AI327031|Hkr3","zinc finger and BTB domain containing 48","protein-coding"]
[6788,"chr6",72346760,72348460,"+",0,"NA","exon (NM_026696, exon 2 of 4)","exon (NM_026696, exon 2 of 4)",293,"NM_026696",68364,"Mm.52711","NM_026696","ENSMUSG00000058706","0610030E20Rik","1500031N04Rik|2810411C16Rik|AI461894","RIKEN cDNA 0610030E20 gene","protein-coding"]
[7012,"chr6",142386603,142389111,"+",0,"NA","promoter-TSS (NM_023042)","promoter-TSS (NM_023042)",614,"NM_025872",66964,"Mm.3676","NM_025872","ENSMUSG00000030245","Golt1b","2310061A22Rik|AA407874|AU024291|CGI-141","golgi transport 1 homolog B (S. cerevisiae)","protein-coding"]
[4188,"chr19",34191449,34193577,"+",0,"NA","5' UTR (NM_029682, exon 1 of 11)","5' UTR (NM_029682, exon 1 of 11)",243,"NM_029682",76630,"Mm.130952","NM_029682","ENSMUSG00000024776","Stambpl1","1700095N21Rik|8230401J17Rik|ALMalpha|AMSH-FP","STAM binding protein like 1","protein-coding"]
[5617,"chr4",95557170,95557724,"+",0,"NA","promoter-TSS (NM_001113412)","promoter-TSS (NM_001113412)",-60,"NM_001113412",75578,"Mm.276098","NM_029347","ENSMUSG00000028573","Fggy","2310009E04Rik","FGGY carbohydrate kinase domain containing","protein-coding"]
[2397,"chr14",31018324,31020378,"+",0,"NA","promoter-TSS (NM_153547)","promoter-TSS (NM_153547)",213,"NM_001081251",66923,"Mm.27913","NM_025847","ENSMUSG00000042323","Pbrm1","2610016F04Rik|AI507524|BAF180|Pb1","polybromo 1","protein-coding"]
[8572,"chr9",92457324,92458167,"+",0,"NA","5' UTR (NM_178711, exon 1 of 9)","5' UTR (NM_178711, exon 1 of 9)",367,"NM_178711",235527,"Mm.55289","NM_178711","ENSMUSG00000032377","Plscr4","AV245873","phospholipid scramblase 4","protein-coding"]
[7913,"chr8",70526881,70528688,"+",0,"NA","promoter-TSS (NM_010223)","promoter-TSS (NM_010223)",41,"NM_010223",14232,"Mm.141864","NM_010223","ENSMUSG00000019428","Fkbp8","38kDa|FKBP-38|FKBP-8|Fkbp38","FK506 binding protein 8","protein-coding"]
[1613,"chr11",115627896,115628056,"+",0,"NA","intron (NM_001252384, intron 1 of 7)","CpG",319,"NM_001252394",67283,"Mm.383426","NM_026071","ENSMUSG00000020744","Slc25a19","2900089E13Rik|DNC|MUP1|TPC","solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19","protein-coding"]
[6675,"chr6",31220404,31220569,"+",0,"NA","non-coding (NR_040262, exon 1 of 6)","non-coding (NR_040262, exon 1 of 6)",135,"NR_040261",73652,"Mm.441297","NR_040257","ENSMUSG00000087380","2210408F21Rik","-","RIKEN cDNA 2210408F21 gene","ncRNA"]
[5092,"chr3",60497944,60503925,"+",0,"NA","promoter-TSS (NM_001253711)","promoter-TSS (NM_001253711)",-245,"NM_001253711",56758,"Mm.255723","NM_020007","ENSMUSG00000027763","Mbnl1","Mbnl|mKIAA0428","muscleblind-like 1 (Drosophila)","protein-coding"]
[3203,"chr16",59639215,59639730,"+",0,"NA","promoter-TSS (NM_019665)","promoter-TSS (NM_019665)",-133,"NM_019665",56297,"Mm.392505","NM_019665","ENSMUSG00000022722","Arl6","1110018H24Rik|2210411E14Rik|BBS3","ADP-ribosylation factor-like 6","protein-coding"]
[696,"chr10",75515558,75518555,"+",0,"NA","promoter-TSS (NM_026095)","promoter-TSS (NM_026095)",266,"NM_175133",68778,"Mm.29382","NM_175133","ENSMUSG00000033416","Gucd1","1110038D17Rik","guanylyl cyclase domain containing 1","protein-coding"]
[1721,"chr12",8313472,8313800,"+",0,"NA","intron (NM_021429, intron 1 of 6)","MIR|SINE|MIR",203,"NM_021429",58240,"Mm.309954","NM_021429","ENSMUSG00000020605","Hs1bp3","-","HCLS1 binding protein 3","protein-coding"]
[3376,"chr17",25183730,25185159,"+",0,"NA","promoter-TSS (NM_183150)","promoter-TSS (NM_183150)",-117,"NM_183150",214489,"Mm.274433","NM_183150","ENSMUSG00000067722","BC003965","Ccsmst1","cDNA sequence BC003965","protein-coding"]
[1489,"chr11",100472014,100472710,"+",0,"NA","exon (NM_172565, exon 1 of 2)","exon (NM_172565, exon 1 of 2)",420,"NM_172565",217194,"Mm.183320","NM_172565","ENSMUSG00000048732","Klhl11","BC011167","kelch-like 11","protein-coding"]
[4565,"chr2",75657980,75661050,"+",0,"NA","intron (NM_146130, intron 1 of 10)","CpG",225,"NR_033513",627828,"Mm.459502","NR_033513","ENSMUSG00000092086","Gm6793","EG627828","heterogeneous nuclear ribonucleoprotein A3 pseudogene","pseudo"]
[1727,"chr12",13248481,13249602,"+",0,"NA","intron (NM_134040, intron 1 of 25)","CpG",133,"NM_134040",104721,"Mm.251255","NM_134040","ENSMUSG00000037149","Ddx1","AA409185|DBP-RB","DEAD (Asp-Glu-Ala-Asp) box polypeptide 1","protein-coding"]
[6094,"chr5",27790492,27792242,"+",0,"NA","5' UTR (NM_018878, exon 1 of 21)","5' UTR (NM_018878, exon 1 of 21)",183,"NM_018878",55982,"Mm.277190","NM_018878","ENSMUSG00000002221","Paxip1","D5Ertd149e|PTIP","PAX interacting (with transcription-activation domain) protein 1","protein-coding"]
[1225,"chr11",69795589,69796351,"+",0,"NA","promoter-TSS (NM_009601)","promoter-TSS (NM_009601)",-33,"NM_009601",11443,"Mm.86425","NM_009601","ENSMUSG00000041189","Chrnb1","Achr-2|Acrb","cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)","protein-coding"]
[5381,"chr3",138442362,138443484,"+",0,"NA","promoter-TSS (NM_007410)","promoter-TSS (NM_007410)",-170,"NM_007410",11532,"Mm.3874","NM_007410","ENSMUSG00000028138","Adh5","Adh-5|Adh3|GSNOR","alcohol dehydrogenase 5 (class III), chi polypeptide","protein-coding"]
[2702,"chr15",43477234,43477688,"+",0,"NA","promoter-TSS (NR_046064)","promoter-TSS (NR_046064)",232,"NM_025736",66736,"Mm.244512","NM_025736","ENSMUSG00000022337","Emc2","4921531G14Rik|AV060620|AW209495|Ttc35","ER membrane protein complex subunit 2","protein-coding"]
[1895,"chr12",84361530,84362467,"+",0,"NA","promoter-TSS (NM_172582)","promoter-TSS (NM_172582)",30,"NM_172582",217707,"Mm.280062","NM_172582","ENSMUSG00000021235","Coq6","5930427M12Rik|AW742344","coenzyme Q6 homolog (yeast)","protein-coding"]
[7046,"chr7",4657412,4659654,"+",0,"NA","5' UTR (NM_172894, exon 1 of 24)","5' UTR (NM_172894, exon 1 of 24)",417,"NM_172894",243819,"Mm.258670","NM_172894","ENSMUSG00000052296","Ppp6r1","2010309P17Rik|AI836219|B430201G11Rik|D030074N20Rik|Pp6r1|Saps1|mKIAA1115","protein phosphatase 6, regulatory subunit 1","protein-coding"]
[3799,"chr18",24652386,24654196,"+",0,"NA","promoter-TSS (NM_026779)","promoter-TSS (NM_026779)",-400,"NM_026779",68591,"Mm.28252","NM_026779","ENSMUSG00000039616","Mocos","1110018O12Rik|HMCS|MCS|MOS","molybdenum cofactor sulfurase","protein-coding"]
[655,"chr10",60830915,60832495,"+",0,"NA","promoter-TSS (NM_029770)","promoter-TSS (NM_029770)",-124,"NM_029770",107449,"Mm.290433","NM_029770","ENSMUSG00000020099","Unc5b","6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2","unc-5 homolog B (C. elegans)","protein-coding"]
[8033,"chr8",88361069,88362906,"+",0,"NA","5' UTR (NM_012047, exon 1 of 17)","5' UTR (NM_012047, exon 1 of 17)",204,"NM_012047",26992,"Mm.5400","NM_012047","ENSMUSG00000031660","Brd7","BP75|CELTIX1|Ptpn13ip","bromodomain containing 7","protein-coding"]
[3742,"chr17",88064073,88067160,"+",0,"NA","promoter-TSS (NM_001081034)","promoter-TSS (NM_001081034)",-331,"NM_001081034",225055,"Mm.386857","NM_001081034","ENSMUSG00000005371","Fbxo11","C80048|Jf","F-box protein 11","protein-coding"]
[1863,"chr12",79190509,79191818,"+",0,"NA","intron (NM_021557, intron 1 of 6)","intron (NM_021557, intron 1 of 6)",656,"NM_021557",17252,"Mm.291799","NM_021557","ENSMUSG00000066441","Rdh11","2610319N22Rik|AI428145|AU045252|Arsdr1|C85936|CGI-82|HCBP12|M42C60|Mdt1|Psdr1|SCALD|UBE-1c1|Ube-1c","retinol dehydrogenase 11","protein-coding"]
[5852,"chr4",133238642,133242349,"+",0,"NA","promoter-TSS (NM_016693)","promoter-TSS (NM_016693)",-323,"NM_016693",53608,"Mm.36640","NM_016693","ENSMUSG00000028862","Map3k6","Ask2|MAPKKK6|MEKK6","mitogen-activated protein kinase kinase kinase 6","protein-coding"]
[4693,"chr2",119593843,119594988,"+",0,"NA","non-coding (NR_015473, exon 1 of 3)","non-coding (NR_015473, exon 1 of 3)",119,"NR_015473",66602,"Mm.379181","NR_015473","ENSMUSG00000085438","1700020I14Rik","1190006L01Rik|4933437I03Rik|AI451541|AI585852|AW538376|AW558897|Cyrano","RIKEN cDNA 1700020I14 gene","ncRNA"]
[1411,"chr11",94548466,94549706,"+",0,"NA","exon (NM_001013381, exon 1 of 9)","exon (NM_001013381, exon 1 of 9)",121,"NM_001013381",237926,"Mm.342275","NM_001013381","ENSMUSG00000039096","Rsad1","B430319G23|BC056485","radical S-adenosyl methionine domain containing 1","protein-coding"]
[4793,"chr2",138278008,138282968,"+",0,"NA","exon (NM_001025431, exon 4 of 5)","exon (NM_001025431, exon 4 of 5)",1995,"NM_145534",228662,"Mm.153405","NM_145534","ENSMUSG00000062098","Btbd3","mKIAA0952","BTB (POZ) domain containing 3","protein-coding"]
[1588,"chr11",110337030,110338093,"+",0,"NA","5' UTR (NM_147219, exon 1 of 39)","5' UTR (NM_147219, exon 1 of 39)",155,"NM_147219",217265,"Mm.41942","NM_147219","ENSMUSG00000018800","Abca5","ABC13|B930033A02Rik|mKIAA1888","ATP-binding cassette, sub-family A (ABC1), member 5","protein-coding"]
[5744,"chr4",120404780,120406193,"+",0,"NA","intron (NM_001159630, intron 1 of 17)","CpG",205,"NM_013883",29871,"Mm.427014","NM_013883","ENSMUSG00000000085","Scmh1","AI315320|AI851618|Scml1|Scml3","sex comb on midleg homolog 1","protein-coding"]
[7387,"chr7",80073740,80076223,"+",0,"NA","intron (NR_045695, intron 1 of 2)","intron (NR_045695, intron 1 of 2)",276,"NR_045695",100859962,"Mm.392575","NR_045695",null,"Gm21057","-","predicted gene, 21057","ncRNA"]
[1689,"chr11",120795908,120797040,"+",0,"NA","promoter-TSS (NM_026824)","promoter-TSS (NM_026824)",-79,"NM_026824",68730,"Mm.180622","NM_026824","ENSMUSG00000025155","Dus1l","1110032N12Rik","dihydrouridine synthase 1-like (S. cerevisiae)","protein-coding"]
[2825,"chr15",79670899,79671381,"+",0,"NA","intron (NM_172609, intron 1 of 3)","CpG",272,"NM_172609",223696,"Mm.246435","NM_172609","ENSMUSG00000022427","Tomm22","2310047D01|Tom22","translocase of outer mitochondrial membrane 22 homolog (yeast)","protein-coding"]
[3312,"chr17",15704206,15706836,"+",0,"NA","intron (NM_007690, intron 1 of 35)","G-rich|Low_complexity|Low_complexity",554,"NM_007690",12648,"Mm.8137","NM_007690","ENSMUSG00000023852","Chd1","4930525N21Rik|AI851787|AW555109","chromodomain helicase DNA binding protein 1","protein-coding"]
[2897,"chr15",89429070,89430550,"+",0,"NA","non-coding (NR_004843, exon 1 of 27)","non-coding (NR_004843, exon 1 of 27)",117,"NR_037154",12651,"Mm.485045","NM_007692","ENSMUSG00000022617","Chkb","Chetk|Chkl|Ck|Ck/Ek|Ck/Ek-beta|Ckb|Ckekb|Ek","choline kinase beta","protein-coding"]
[4195,"chr19",36923976,36926702,"+",0,"NA","promoter-TSS (NM_001080706)","promoter-TSS (NM_001080706)",-740,"NM_001080706",107182,"Mm.295062","NM_001080706","ENSMUSG00000040565","Btaf1","AI414500|AI447930|E430027O22Rik|TAF170","BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)","protein-coding"]
[6740,"chr6",52011997,52013810,"+",0,"NA","promoter-TSS (NM_018773)","promoter-TSS (NM_018773)",-354,"NM_018773",54353,"Mm.221479","NM_018773","ENSMUSG00000059182","Skap2","2610021A10Rik|AA960083|BB137539|RA70|SKAP-HOM|Saps|Scap2|mSKAP55R","src family associated phosphoprotein 2","protein-coding"]
[3268,"chr16",95990542,95991419,"+",0,"NA","promoter-TSS (NM_019537)","promoter-TSS (NM_019537)",-77,"NM_019537",56088,"Mm.396248","NM_019537","ENSMUSG00000022913","Psmg1","AW552102|Dscr2","proteasome (prosome, macropain) assembly chaperone 1","protein-coding"]
[7406,"chr7",81523093,81524376,"+",0,"NA","intron (NR_045299, intron 1 of 4)","intron (NR_045299, intron 1 of 4)",184,"NR_045299",100504421,"Mm.217071","NR_045299","ENSMUSG00000097277","2900076A07Rik","WI1-1616M8.2","RIKEN cDNA 2900076A07 gene","ncRNA"]
[2145,"chr13",54071881,54073005,"+",0,"NA","intron (NM_027324, intron 1 of 10)","intron (NM_027324, intron 1 of 10)",598,"NM_027324",14057,"Mm.134191","NM_027324","ENSMUSG00000021474","Sfxn1","2810002O05Rik|A930015P12Rik|f","sideroflexin 1","protein-coding"]
[8717,"chr9",119444985,119445955,"+",0,"NA","intron (NM_001172136, intron 2 of 6)","MTE2b|LTR|ERVL-MaLR",547,"NM_172456",208194,"Mm.101578","NM_172456","ENSMUSG00000042787","Exog","AW557704|ENGL-B|ENGL-a|Endogl1|Endogl2|Engl|Engla|Englb","endo/exonuclease (5'-3'), endonuclease G-like","protein-coding"]
[739,"chr10",79960266,79960560,"+",0,"NA","intron (NM_175450, intron 1 of 9)","CpG",261,"NM_175450",216156,"Mm.35828","NM_175450","ENSMUSG00000035754","Wdr18","2310012I10Rik|AU044733|AW122032","WD repeat domain 18","protein-coding"]
[7795,"chr8",25101200,25103401,"+",0,"NA","promoter-TSS (NM_031257)","promoter-TSS (NM_031257)",-489,"NM_031257",83436,"Mm.261122","NM_031257","ENSMUSG00000031557","Plekha2","6430512N22Rik|AI851530|AU041791|TAPP2|W91773","pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2","protein-coding"]
[8878,"chrX",75873492,75876201,"+",0,"NA","promoter-TSS (NM_145629)","promoter-TSS (NM_145629)",-272,"NM_145629",102866,"Mm.28777","NM_145629","ENSMUSG00000016382","Pls3","AI115446|AL024105","plastin 3 (T-isoform)","protein-coding"]
[7151,"chr7",25297291,25297986,"+",0,"NA","intron (NM_008776, intron 1 of 5)","CpG-12842",317,"NM_008776",18476,"Mm.597","NM_008776","ENSMUSG00000005447","Pafah1b3","Pafahg|mus[g]","platelet-activating factor acetylhydrolase, isoform 1b, subunit 3","protein-coding"]
[8393,"chr9",50745291,50746591,"+",0,"NA","intron (NM_025865, intron 1 of 3)","intron (NM_025865, intron 1 of 3)",580,"NM_025865",66952,"Mm.273375","NM_025865","ENSMUSG00000032062","2310030G06Rik","2610024D04Rik|AV017521","RIKEN cDNA 2310030G06 gene","protein-coding"]
[4514,"chr2",51972481,51973998,"+",0,"NA","promoter-TSS (NM_001141948)","promoter-TSS (NM_001141948)",-31,"NM_001141948",64685,"Mm.7491","NM_019401","ENSMUSG00000026946","Nmi","-","N-myc (and STAT) interactor","protein-coding"]
[6775,"chr6",67264875,67270055,"+",0,"NA","intron (NM_025814, intron 1 of 7)","CpG",486,"NM_025814",66870,"Mm.240490","NM_025814",null,"Serbp1","1200009K13Rik|9330147J08Rik|AL022786|Pairbp1","serpine1 mRNA binding protein 1","protein-coding"]
[653,"chr10",60277037,60280535,"+",0,"NA","intron (NM_001146120, intron 1 of 13)","intron (NM_001146120, intron 1 of 13)",1158,"NM_001146121",19156,"Mm.277498","NM_011179","ENSMUSG00000004207","Psap","AI037048|SGP-1","prosaposin","protein-coding"]
[7582,"chr7",126428421,126429740,"+",0,"NA","5' UTR (NM_030566, exon 1 of 13)","5' UTR (NM_030566, exon 1 of 13)",313,"NM_030566",70314,"Mm.35467","NM_030566","ENSMUSG00000030727","Rabep2","2610011A08Rik|AI462746|Fra","rabaptin, RAB GTPase binding effector protein 2","protein-coding"]
[2677,"chr15",32920951,32921122,"+",0,"NA","5' UTR (NM_008304, exon 1 of 5)","5' UTR (NM_008304, exon 1 of 5)",313,"NM_008304",15529,"Mm.234266","NM_008304","ENSMUSG00000022261","Sdc2","4833414L08Rik|AA960457|Hspg1|Synd2|syndecan-2","syndecan 2","protein-coding"]
[6834,"chr6",86437848,86439615,"+",0,"NA","promoter-TSS (NM_001243741)","promoter-TSS (NM_001243741)",85,"NM_001243741",232196,"Mm.404040","NM_146170","ENSMUSG00000046679","C87436","-","expressed sequence C87436","protein-coding"]
[1821,"chr12",69986441,69987473,"+",0,"NA","promoter-TSS (NM_022028)","promoter-TSS (NM_022028)",45,"NM_022028",64010,"Mm.390480","NM_022028","ENSMUSG00000021067","Sav1","1700040G09Rik|Salv|Sav|WW45|Wwp3|Wwp4","salvador homolog 1 (Drosophila)","protein-coding"]
[7756,"chr8",11757715,11759013,"+",0,"NA","promoter-TSS (NM_001113518)","promoter-TSS (NM_001113518)",34,"NM_001113518",54126,"Mm.244068","NM_017402","ENSMUSG00000031511","Arhgef7","Cool|PIX|Pak3bp|betaPix|betaPix-b|betaPix-c|cool-1|mKIAA0142|p85Cool1|p85SPR","Rho guanine nucleotide exchange factor (GEF7)","protein-coding"]
[8835,"chrX",56454626,56455771,"+",0,"NA","5' UTR (NM_172779, exon 1 of 17)","5' UTR (NM_172779, exon 1 of 17)",359,"NM_172779",236790,"Mm.474772","NM_172779","ENSMUSG00000035967","Ddx26b","4930535D10Rik|6330505F04Rik|D130066O12","DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B","protein-coding"]
[1138,"chr11",58171298,58172111,"+",0,"NA","promoter-TSS (NM_175001)","promoter-TSS (NM_175001)",50,"NM_175001",216767,"Mm.259907","NM_175001","ENSMUSG00000020514","Mrpl22","E030011D16Rik|HSPC158|MRP-L25|Rpml25","mitochondrial ribosomal protein L22","protein-coding"]
[6701,"chr6",39573403,39574850,"+",0,"NA","5' UTR (NM_178873, exon 1 of 8)","5' UTR (NM_178873, exon 1 of 8)",250,"NM_178873",57869,"Mm.247957","NM_178873","ENSMUSG00000046947","Adck2","AA408112|BB006057","aarF domain containing kinase 2","protein-coding"]
[4071,"chr19",6920590,6922689,"+",0,"NA","TTS (NM_001039494)","TTS (NM_001039494)",169,"NM_007953",26379,"Mm.386776","NM_007953","ENSMUSG00000024955","Esrra","ERRalpha|Err1|Estrra|Nr3b1","estrogen related receptor, alpha","protein-coding"]
[3855,"chr18",37954211,37956111,"+",0,"NA","promoter-TSS (NM_153793)","promoter-TSS (NM_153793)",-173,"NM_010411",15183,"Mm.20521","NM_010411","ENSMUSG00000024454","Hdac3","AW537363","histone deacetylase 3","protein-coding"]
[2883,"chr15",86213428,86215022,"+",0,"NA","promoter-TSS (NM_145476)","promoter-TSS (NM_145476)",-234,"NM_145476",223754,"Mm.28904","NM_145476","ENSMUSG00000051864","Tbc1d22a","BC023106|D15Ertd781e","TBC1 domain family, member 22a","protein-coding"]
[3793,"chr18",24019897,24021590,"+",0,"NA","promoter-TSS (NM_021559)","promoter-TSS (NM_021559)",28,"NM_021559",59057,"Mm.417427","NM_021559",null,"Zfp24","3526401F17Rik|5033419P20Rik|AI480505|AI642085|AL024422|KOX17|ZF-12|Zfp191|Znf191|Znf24|Znp191","zinc finger protein 24","protein-coding"]
[8677,"chr9",108990113,108992336,"+",0,"NA","promoter-TSS (NM_173019)","promoter-TSS (NM_173019)",-678,"NM_173019",270198,"Mm.132391","NM_173019","ENSMUSG00000025648","Pfkfb4","C230090D14","6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4","protein-coding"]
[45,"chr1",36272832,36273356,"+",0,"NA","intron (NM_153408, intron 1 of 3)","intron (NM_153408, intron 1 of 3)",331,"NM_153408",214854,"Mm.389110","NM_153408","ENSMUSG00000047180","Neurl3","2010300P06Rik|Lincr","neuralized E3 ubiquitin protein ligase 3","protein-coding"]
[4426,"chr2",30048920,30049453,"+",0,"NA","promoter-TSS (NM_001008498)","promoter-TSS (NM_001008498)",-307,"NM_001008498",71820,"Mm.88053","NM_001008498","ENSMUSG00000039715","Wdr34","3200002I06Rik","WD repeat domain 34","protein-coding"]
[1173,"chr11",60809157,60811191,"+",0,"NA","intron (NM_009171, intron 1 of 11)","B1_Mm|SINE|Alu",1091,"NM_009171",20425,"Mm.364956","NM_009171",null,"Shmt1","AI324848|AI385541|C81125|Shmt|mshmt|mshmt1|mshmt2","serine hydroxymethyltransferase 1 (soluble)","protein-coding"]
[1963,"chr12",110601440,110603015,"+",0,"NA","intron (NM_030238, intron 1 of 76)","MIR3|SINE|MIR",832,"NM_030238",13424,"Mm.181430","NM_030238","ENSMUSG00000018707","Dync1h1","9930018I23Rik|AI894280|DHC1|DHC1a|DNCL|Dnchc1|Dnec1|Dnecl|Loa|MAP1C|P22|Swl|mKIAA0325","dynein cytoplasmic 1 heavy chain 1","protein-coding"]
[1733,"chr12",16999690,17001362,"+",0,"NA","promoter-TSS (NM_172574)","promoter-TSS (NM_172574)",-408,"NM_001161111",217430,"Mm.379451","NM_172574","ENSMUSG00000045679","Pqlc3","C78076|E030024M05Rik","PQ loop repeat containing","protein-coding"]
[3383,"chr17",25773853,25774162,"+",0,"NA","intron (NM_026238, intron 1 of 10)","intron (NM_026238, intron 1 of 10)",231,"NM_026238",67563,"Mm.24201","NM_026238","ENSMUSG00000002280","Narfl","9030612I22Rik|AI504405|PRN","nuclear prelamin A recognition factor-like","protein-coding"]
[8645,"chr9",107769924,107771560,"+",0,"NA","intron (NM_148930, intron 1 of 24)","CpG",260,"NM_148930",83486,"Mm.259197","NM_148930","ENSMUSG00000032580","Rbm5","D030069N10Rik","RNA binding motif protein 5","protein-coding"]
[2841,"chr15",81359536,81361617,"+",0,"NA","intron (NM_011399, intron 1 of 8)","CpG",189,"NM_011399",20524,"Mm.222536","NM_011399","ENSMUSG00000022404","Slc25a17","34kDa|47kDa|PMP34|Pmp47","solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17","protein-coding"]
[2442,"chr14",47648800,47650283,"+",0,"NA","intron (NM_001293635, intron 1 of 40)","CpG",230,"NM_001293635",16709,"Mm.3110","NM_008477","ENSMUSG00000021843","Ktn1","-","kinectin 1","protein-coding"]
[5931,"chr4",140698260,140703255,"+",0,"NA","promoter-TSS (NM_173867)","promoter-TSS (NM_173867)",-716,"NM_173867",108911,"Mm.253","NM_173867","ENSMUSG00000040945","Rcc2","2610510H01Rik|2610529N02Rik|AA536646|AA675016|Td60|mKIAA1470","regulator of chromosome condensation 2","protein-coding"]
[399,"chr1",167307940,167309114,"+",0,"NA","promoter-TSS (NM_001039483)","promoter-TSS (NM_001039483)",-143,"NM_001039483",68944,"Mm.330045","NM_026881","ENSMUSG00000052428","Tmco1","1190006A08Rik|4930403O06Rik|AA109065|AU022572|ESTM39","transmembrane and coiled-coil domains 1","protein-coding"]
[436,"chr1",173981272,173983562,"+",0,"NA","intron (NM_008327, intron 1 of 6)","intron (NM_008327, intron 1 of 6)",427,"NM_008327",26388,"Mm.218770","NM_008327","ENSMUSG00000026535","Ifi202b","Ifbip-1|Ifi202|Ifi202a|p202","interferon activated gene 202B","protein-coding"]
[5114,"chr3",79566948,79569096,"+",0,"NA","promoter-TSS (NM_001162999)","promoter-TSS (NM_001162999)",-343,"NM_001162999",329679,"Mm.244005","NM_001162999","ENSMUSG00000061175","Fnip2","D630023B12Rik|mKIAA1450","folliculin interacting protein 2","protein-coding"]
[4818,"chr2",148676461,148681847,"+",0,"NA","Intergenic","Intergenic",-1966,"NM_028986",74533,"Mm.136913","NM_028986","ENSMUSG00000027439","Gzf1","8430437G08Rik|Zfp336|mGZF1","GDNF-inducible zinc finger protein 1","protein-coding"]
[3098,"chr16",22919828,22920797,"+",0,"NA","promoter-TSS (NM_021564)","promoter-TSS (NM_021564)",90,"NM_001083904",59083,"Mm.28461","NM_021564","ENSMUSG00000022871","Fetub","2310011O17Rik|AI255764|D17980|Gugu","fetuin beta","protein-coding"]
[1129,"chr11",55097228,55098395,"+",0,"NA","promoter-TSS (NM_010299)","promoter-TSS (NM_010299)",-174,"NM_010299",14667,"Mm.287807","NM_010299","ENSMUSG00000000594","Gm2a","AA408702|AW215435|GM2-AP|SAP-3","GM2 ganglioside activator protein","protein-coding"]
[2848,"chr15",81802002,81803636,"+",0,"NA","exon (NM_153484, exon 1 of 4)","exon (NM_153484, exon 1 of 4)",146,"NM_153484",21685,"Mm.270278","NM_017376","ENSMUSG00000022389","Tef","2310028D20Rik","thyrotroph embryonic factor","protein-coding"]
[386,"chr1",163994391,163995374,"+",0,"NA","promoter-TSS (NM_201364)","promoter-TSS (NM_201364)",-63,"NM_027279",69962,"Mm.27284","NM_027279","ENSMUSG00000041396","Mettl18","2810422O20Rik|C78571","methyltransferase like 18","protein-coding"]
[5155,"chr3",88579259,88580361,"+",0,"NA","5' UTR (NM_025448, exon 1 of 5)","5' UTR (NM_025448, exon 1 of 5)",139,"NM_025448",66256,"Mm.7091","NM_025448","ENSMUSG00000041355","Ssr2","1500032E05Rik|AI315033|AU020133|TLAP|TRAPB|TRAPbeta","signal sequence receptor, beta","protein-coding"]
[2970,"chr15",102253979,102259815,"+",0,"NA","intron (NM_011244, intron 1 of 9)","intron (NM_011244, intron 1 of 9)",625,"NM_011244",19411,"Mm.1273","NM_011244","ENSMUSG00000001288","Rarg","Nr1b3|RAR-gamma|RARD|RARgamma2","retinoic acid receptor, gamma","protein-coding"]
[7881,"chr8",67494909,67495240,"+",0,"NA","intron (NM_010874, intron 1 of 1)","intron (NM_010874, intron 1 of 1)",126,"NM_010874",17961,"Mm.4695","NM_010874","ENSMUSG00000051147","Nat2","AV377607","N-acetyltransferase 2 (arylamine N-acetyltransferase)","protein-coding"]
[7395,"chr7",80343140,80343754,"+",0,"NA","intron (NM_026812, intron 1 of 3)","MIRb|SINE|MIR",310,"NM_026812",68695,"Mm.21171","NM_026812","ENSMUSG00000030532","Hddc3","1110033O09Rik|C86475|MESH1","HD domain containing 3","protein-coding"]
[5051,"chr3",36612939,36613809,"+",0,"NA","promoter-TSS (NM_027810)","promoter-TSS (NM_027810)",15,"NM_027810",71492,"Mm.286187","NM_027810","ENSMUSG00000037325","Bbs7","8430406N16Rik","Bardet-Biedl syndrome 7 (human)","protein-coding"]
[4034,"chr19",5487552,5491613,"+",0,"NA","promoter-TSS (NM_007687)","promoter-TSS (NM_007687)",-873,"NM_007687",12631,"Mm.329655","NM_007687",null,"Cfl1","AA959946|Cof","cofilin 1, non-muscle","protein-coding"]
[5563,"chr4",57141594,57144078,"+",0,"NA","intron (NM_019427, intron 1 of 15)","CpG",320,"NM_019427",54357,"Mm.28217","NM_019427","ENSMUSG00000028434","Epb41l4b","6430543G08Rik|AA589614|AU021054|BB007528|D4Ertd346e|Ehm2|Epb4.1l4b|Lulu2","erythrocyte membrane protein band 4.1 like 4b","protein-coding"]
[3153,"chr16",36874489,36875946,"+",0,"NA","promoter-TSS (NM_134111)","promoter-TSS (NM_134111)",-391,"NM_134111",106389,"Mm.432078","NM_134111","ENSMUSG00000022838","Eaf2","AW048865|FESTA-L|FESTA-S|Festa|Traits|U19","ELL associated factor 2","protein-coding"]
[911,"chr10",127620600,127623118,"+",0,"NA","promoter-TSS (NM_008512)","promoter-TSS (NM_008512)",-711,"NM_008512",16971,"Mm.271854","NM_008512","ENSMUSG00000040249","Lrp1","A2mr|AI316852|CD91|Lrp|b2b1554Clo","low density lipoprotein receptor-related protein 1","protein-coding"]
[7523,"chr7",111081780,111084051,"+",0,"NA","5' UTR (NM_013507, exon 1 of 22)","5' UTR (NM_013507, exon 1 of 22)",115,"NM_001040131",13690,"Mm.185453","NM_013507",null,"Eif4g2","AA589388|DAP-5|E130105L11Rik|Nat1|Natm1|p97","eukaryotic translation initiation factor 4, gamma 2","protein-coding"]
[8871,"chrX",74428483,74430098,"+",0,"NA","promoter-TSS (NM_010547)","promoter-TSS (NM_010547)",-25,"NM_001161422",16151,"Mm.12967","NM_010547","ENSMUSG00000004221","Ikbkg","1110037D23Rik|AI848108|AI851264|AW124339|IKK[g]|NEMO","inhibitor of kappaB kinase gamma","protein-coding"]
[5058,"chr3",40744849,40746368,"+",0,"NA","promoter-TSS (NM_011020)","promoter-TSS (NM_011020)",-5,"NM_011020",18415,"Mm.39330","NM_011020","ENSMUSG00000025757","Hspa4l","94kDa|AI461691|APG-1|Osp94","heat shock protein 4 like","protein-coding"]
[7016,"chr6",143168665,143169638,"+",0,"NA","intron (NM_029250, intron 1 of 7)","intron (NM_029250, intron 1 of 7)",1921,"NM_029250",75320,"Mm.272548","NM_029250","ENSMUSG00000030275","Etnk1","1110061E11Rik|4930555L11Rik|AI195356|AI841245|C80956|D6Ertd3e|EKI1","ethanolamine kinase 1","protein-coding"]
[8497,"chr9",66591529,66594951,"+",0,"NA","promoter-TSS (NM_001302122)","promoter-TSS (NM_001302122)",-125,"NM_001302122",235441,"Mm.32465","NM_144937","ENSMUSG00000032376","Usp3","AA409661|BC017156","ubiquitin specific peptidase 3","protein-coding"]
[4531,"chr2",60876854,60882414,"+",0,"NA","intron (NM_020296, intron 1 of 13)","intron (NM_020296, intron 1 of 13)",1804,"NM_001141932",56878,"Mm.259667","NM_020296","ENSMUSG00000026970","Rbms1","2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1","RNA binding motif, single stranded interacting protein 1","protein-coding"]
[956,"chr11",4118332,4119197,"+",0,"NA","promoter-TSS (NM_144520)","promoter-TSS (NM_144520)",-35,"NM_144520",67815,"Mm.253922","NM_144520","ENSMUSG00000003585","Sec14l2","1300013M05Rik|Spf|TAP","SEC14-like lipid binding 2","protein-coding"]
[3204,"chr16",62785744,62787514,"+",0,"NA","promoter-TSS (NM_178925)","promoter-TSS (NM_178925)",87,"NM_178925",106338,"Mm.26321","NM_178925",null,"Nsun3","6720484A09Rik|AU022521","NOL1/NOP2/Sun domain family member 3","protein-coding"]
[8488,"chr9",65460972,65461729,"+",0,"NA","intron (NM_138584, intron 1 of 8)","intron (NM_138584, intron 1 of 8)",413,"NM_138584",27965,"Mm.272475","NM_138584","ENSMUSG00000032388","Spg21","ACP33|BM-019|C78576|D9Wsu18e|GL010|MAST","spastic paraplegia 21 homolog (human)","protein-coding"]
[4771,"chr2",130642585,130643142,"+",0,"NA","promoter-TSS (NM_197945)","promoter-TSS (NM_197945)",-19,"NM_001291027",241638,"Mm.440130","NM_197945","ENSMUSG00000037703","Lzts3","Prosapip1","leucine zipper, putative tumor suppressor family member 3","protein-coding"]
[5604,"chr4",86669779,86670281,"+",0,"NA","promoter-TSS (NM_007408)","promoter-TSS (NM_007408)",29,"NM_007408",11520,"Mm.381","NM_007408","ENSMUSG00000028494","Plin2","AA407157|ADPH|Adfp|Adrp","perilipin 2","protein-coding"]
[2997,"chr16",4938777,4939805,"+",0,"NA","TTS (NM_001252437)","TTS (NM_001252437)",180,"NM_025839",66911,"Mm.428698","NM_025839","ENSMUSG00000022516","Nudt16l1","1110001K21Rik|5330437I08Rik|Sdos","nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1","protein-coding"]
[4494,"chr2",35978762,35980130,"+",0,"NA","exon (NM_029774, exon 1 of 10)","exon (NM_029774, exon 1 of 10)",178,"NM_029774",74410,"Mm.21591","NM_028921","ENSMUSG00000026885","Ttll11","4932702F08Rik|4933424A20Rik|AU043211|D2Ertd624e","tubulin tyrosine ligase-like family, member 11","protein-coding"]
[1209,"chr11",69015360,69017169,"+",0,"NA","intron (NM_001013256, intron 1 of 22)","intron (NM_001013256, intron 1 of 22)",353,"NM_001013256",68964,"Mm.285785","NM_001013256","ENSMUSG00000020898","Ctc1","1500010J02Rik|AAF-132|AAF132","CTS telomere maintenance complex component 1","protein-coding"]
[6655,"chr6",24746519,24748430,"+",0,"NA","promoter-TSS (NM_029848)","promoter-TSS (NM_029848)",-893,"NM_029848",77042,"Mm.66017","NM_029848",null,"Hyal4","4632428M18Rik|CSHY","hyaluronoglucosaminidase 4","protein-coding"]
[5727,"chr4",118427509,118431181,"+",0,"NA","promoter-TSS (NM_001039176)","promoter-TSS (NM_001039176)",-356,"NM_001039176",54325,"Mm.282096","NM_019422","ENSMUSG00000006390","Elovl1","AA407424|BB151133|Ssc1","elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1","protein-coding"]
[7714,"chr7",143296004,143296368,"+",0,"NA","non-coding (NR_001461, exon 1 of 1)","non-coding (NR_001461, exon 1 of 1)",361,"NR_001461",63830,"Mm.356096","NR_001461","ENSMUSG00000101609","Kcnq1ot1","Kvlqt1-as|Lit1|Tssc8","KCNQ1 overlapping transcript 1","ncRNA"]
[6903,"chr6",113638499,113638653,"+",0,"NA","exon (NM_172161, exon 1 of 13)","exon (NM_172161, exon 1 of 13)",109,"NM_001113553",108960,"Mm.152142","NM_172161","ENSMUSG00000060477","Irak2","6330415L08Rik|AI649099|IRAK-2","interleukin-1 receptor-associated kinase 2","protein-coding"]
[3319,"chr17",21383120,21384143,"+",0,"NA","promoter-TSS (NM_172486)","promoter-TSS (NM_172486)",-117,"NM_172486",210503,"Mm.33443","NM_172486","ENSMUSG00000062743","Zfp677","A830058L05Rik|Tce8","zinc finger protein 677","protein-coding"]
[2219,"chr13",72626645,72632624,"+",0,"NA","intron (NM_010574, intron 1 of 4)","CpG",656,"NM_010574",16372,"Mm.28888","NM_010574","ENSMUSG00000001504","Irx2","IRX6","Iroquois related homeobox 2 (Drosophila)","protein-coding"]
[2464,"chr14",54257922,54259873,"+",0,"NA","promoter-TSS (NM_134076)","promoter-TSS (NM_134076)",-335,"NM_134076",105501,"Mm.28771","NM_134076","ENSMUSG00000040997","Abhd4","1110035H23Rik|AI429574|Abh4","abhydrolase domain containing 4","protein-coding"]
[6178,"chr5",45492894,45493854,"+",0,"NA","promoter-TSS (NM_024434)","promoter-TSS (NM_024434)",0,"NM_024434",66988,"Mm.286830","NM_024434","ENSMUSG00000039682","Lap3","2410015L10Rik|AA410100|LAP-3|Lap|Lapep|Pep-7|Pep-S|Pep7|Peps","leucine aminopeptidase 3","protein-coding"]
[1611,"chr11",115603253,115604817,"+",0,"NA","promoter-TSS (NM_001252067)","promoter-TSS (NM_001252067)",-116,"NM_025305",50529,"Mm.193040","NM_025305",null,"Mrps7","MRP-S7|Rpms7","mitchondrial ribosomal protein S7","protein-coding"]
[4101,"chr19",8801709,8803118,"+",0,"NA","promoter-TSS (NM_001098237)","promoter-TSS (NM_001098237)",-83,"NM_133759",75291,"Mm.23423","NM_133759","ENSMUSG00000071661","Zbtb3","4930563M09Rik","zinc finger and BTB domain containing 3","protein-coding"]
[3850,"chr18",36800032,36802504,"+",0,"NA","promoter-TSS (NR_027885)","promoter-TSS (NR_027885)",-495,"NR_027885",378472,"Mm.482379","NR_027885",null,"Vaultrc5","Gm22653|Mvg1","vault RNA component 5","ncRNA"]
[960,"chr11",4266635,4266937,"+",0,"NA","promoter-TSS (NM_001039537)","promoter-TSS (NM_001039537)",-10,"NM_001039537",16878,"Mm.4964","NM_008501","ENSMUSG00000034394","Lif","-","leukemia inhibitory factor","protein-coding"]
[2908,"chr15",96284052,96289240,"+",0,"NA","promoter-TSS (NM_175251)","promoter-TSS (NM_175251)",-876,"NM_175251",77044,"Mm.17166","NM_175251","ENSMUSG00000033237","Arid2","1700124K17Rik|4432409D24Rik|zipzap/p200","AT rich interactive domain 2 (ARID, RFX-like)","protein-coding"]
[3288,"chr17",6079249,6080475,"+",0,"NA","promoter-TSS (NM_001111017)","promoter-TSS (NM_001111017)",34,"NM_181392",66467,"Mm.303441","NM_181392","ENSMUSG00000034345","Gtf2h5","2700017P07Rik|2810432H05Rik|D17Wsu155e","general transcription factor IIH, polypeptide 5","protein-coding"]
[6581,"chr5",144100394,144101206,"+",0,"NA","intron (NM_001081109, intron 1 of 13)","CpG",364,"NM_001081109",231876,"Mm.288726","NM_001081109","ENSMUSG00000038970","Lmtk2","2900041G10Rik|A330101P12Rik|BREK|KPI-2|KPI2|aatyk2|cprk","lemur tyrosine kinase 2","protein-coding"]
[1346,"chr11",82780643,82782958,"+",0,"NA","promoter-TSS (NR_126068)","promoter-TSS (NR_126068)",691,"NM_010716",16882,"Mm.277136","NM_010716","ENSMUSG00000020697","Lig3","D11Wsu78e","ligase III, DNA, ATP-dependent","protein-coding"]
[7356,"chr7",65645000,65645287,"+",0,"NA","exon (NM_172310, exon 1 of 19)","exon (NM_172310, exon 1 of 19)",245,"NM_172310",272396,"Mm.35127","NM_172310","ENSMUSG00000030515","Tarsl2","A530046H20Rik","threonyl-tRNA synthetase-like 2","protein-coding"]
[8730,"chr9",121704327,121707142,"+",0,"NA","promoter-TSS (NM_178677)","promoter-TSS (NM_178677)",-705,"NM_178677",215474,"Mm.31421","NM_178677","ENSMUSG00000061536","Sec22c","4932412K21|5930407I15Rik|C530046H07|Sec22l3","SEC22 homolog C, vesicle trafficking protein","protein-coding"]
[2106,"chr13",43302995,43305630,"+",0,"NA","promoter-TSS (NM_001033399)","promoter-TSS (NM_001033399)",-140,"NM_001033399",328232,"Mm.441399","NM_001033399","ENSMUSG00000051335","Gfod1","9630032O13|AI850995","glucose-fructose oxidoreductase domain containing 1","protein-coding"]
[1738,"chr12",21316220,21316787,"+",0,"NA","exon (NM_026347, exon 1 of 6)","exon (NM_026347, exon 1 of 6)",111,"NM_026347",67732,"Mm.335830","NM_026347","ENSMUSG00000062054","Iah1","1500019E20Rik|4833421E05Rik","isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)","protein-coding"]
[3920,"chr18",65617559,65618879,"+",0,"NA","intron (NM_207255, intron 2 of 5)","PB1D10|SINE|Alu",1396,"NR_105742",100526497,null,"NR_105742","ENSMUSG00000077113","Mir466p","mmu-mir-466p","microRNA 466p","ncRNA"]
[2367,"chr14",21074918,21076662,"+",0,"NA","promoter-TSS (NM_001243041)","promoter-TSS (NM_001243041)",-362,"NM_001243041",11534,"Mm.188734","NM_134079","ENSMUSG00000039197","Adk","2310026J05Rik|5033405D03Rik|AI255373|AI987814|Ak","adenosine kinase","protein-coding"]
[3765,"chr18",10706315,10707095,"+",0,"NA","promoter-TSS (NM_134130)","promoter-TSS (NM_134130)",-9,"NM_134130",106861,"Mm.273108","NM_134130","ENSMUSG00000002475","Abhd3","AA675331|LABH3","abhydrolase domain containing 3","protein-coding"]
[6341,"chr5",113324164,113324317,"+",0,"NA","TTS (NR_106088)","TTS (NR_106088)",305,"NR_106088",102465709,null,"NR_106088","ENSMUSG00000105778","Mir7229","mmu-mir-7229","microRNA 7229","ncRNA"]
[1948,"chr12",104214248,104214528,"+",0,"NA","promoter-TSS (NM_001168295)","promoter-TSS (NM_001168295)",-156,"NM_001168294",238393,"Mm.483584","NM_001033335","ENSMUSG00000066363","Serpina3f","2A1|BC049975","serine (or cysteine) peptidase inhibitor, clade A, member 3F","protein-coding"]
[4983,"chr2",180580553,180583406,"+",0,"NA","intron (NM_028479, intron 1 of 5)","RSINE1|SINE|B4",675,"NM_028479",73247,"Mm.426558","NM_028479","ENSMUSG00000027569","Mrgbp","1600027N09Rik|AW060503|C80444","MRG/MORF4L binding protein","protein-coding"]
[1780,"chr12",51690397,51695716,"+",0,"NA","intron (NM_021710, intron 1 of 5)","B1_Mm|SINE|Alu",-1142,"NM_052973",94186,"Mm.65979","NM_052973","ENSMUSG00000020954","Strn3","Gs2na|SG2NA","striatin, calmodulin binding protein 3","protein-coding"]
[5298,"chr3",106547197,106548565,"+",0,"NA","promoter-TSS (NM_133869)","promoter-TSS (NM_133869)",-79,"NM_133869",99712,"Mm.486418","NM_133869","ENSMUSG00000040774","Cept1","9930118K05Rik|mCEPT1","choline/ethanolaminephosphotransferase 1","protein-coding"]
[2943,"chr15",99815711,99821307,"+",0,"NA","intron (NM_001113545, intron 4 of 10)","intron (NM_001113545, intron 4 of 10)",1640,"NM_023063",65970,"Mm.33207","NM_023063","ENSMUSG00000023022","Lima1","Eplin","LIM domain and actin binding 1","protein-coding"]
[2512,"chr14",57664434,57665635,"+",0,"NA","promoter-TSS (NM_020506)","promoter-TSS (NM_020506)",-78,"NM_020506",57258,"Mm.202747","NM_020506","ENSMUSG00000021952","Xpo4","B430309A01Rik|mKIAA1721","exportin 4","protein-coding"]
[6993,"chr6",134919073,134922621,"+",0,"NA","5' UTR (NM_009875, exon 1 of 3)","5' UTR (NM_009875, exon 1 of 3)",446,"NM_009875",12576,"Mm.2958","NM_009875","ENSMUSG00000003031","Cdkn1b","AA408329|AI843786|Kip1|p27|p27Kip1","cyclin-dependent kinase inhibitor 1B","protein-coding"]
[5339,"chr3",121672105,121673039,"+",0,"NA","intron (NM_001033814, intron 2 of 5)","(CCCTG)n|Simple_repeat|Simple_repeat",1809,"NM_001033814",619318,"Mm.371258","NM_001033814","ENSMUSG00000074248","4930432M17Rik","-","RIKEN cDNA 4930432M17 gene","protein-coding"]
[2638,"chr15",5143298,5146099,"+",0,"NA","intron (NM_001013367, intron 1 of 8)","intron (NM_001013367, intron 1 of 8)",837,"NM_001013367",105787,"Mm.207004","NM_001013367","ENSMUSG00000050697","Prkaa1","AI194361|AI450832|AL024255|AMPKalpha1|C130083N04Rik","protein kinase, AMP-activated, alpha 1 catalytic subunit","protein-coding"]
[7649,"chr7",131334213,131335443,"+",0,"NA","intron (NM_183272, intron 1 of 2)","intron (NM_183272, intron 1 of 2)",206,"NM_183272",68223,"Mm.233827","NM_183272","ENSMUSG00000030859","Fam24a","1700063I17Rik","family with sequence similarity 24, member A","protein-coding"]
[8443,"chr9",57708141,57709213,"+",0,"NA","5' UTR (NM_153799, exon 1 of 7)","5' UTR (NM_153799, exon 1 of 7)",108,"NM_153799",353190,"Mm.268104","NM_153799",null,"Edc3","AA517853|Lsm16|Yjdc","enhancer of mRNA decapping 3 homolog (S. cerevisiae)","protein-coding"]
[1037,"chr11",29171730,29174360,"+",0,"NA","5' UTR (NM_134034, exon 1 of 16)","5' UTR (NM_134034, exon 1 of 16)",138,"NM_134034",104570,"Mm.276386","NM_134034","ENSMUSG00000020463","Smek2","AW011752|AW557776|mKIAA1387","SMEK homolog 2, suppressor of mek1 (Dictyostelium)","protein-coding"]
[6879,"chr6",100670642,100671152,"+",0,"NA","intron (NM_181590, intron 1 of 10)","CpG",260,"NM_181590",72171,"Mm.256022","NM_181590","ENSMUSG00000035378","Shq1","2810403P18Rik|Grim-1","SHQ1 homolog (S. cerevisiae)","protein-coding"]
[5800,"chr4",129057731,129059155,"+",0,"NA","exon (NM_029219, exon 1 of 9)","exon (NM_029219, exon 1 of 9)",172,"NM_029219",75234,"Mm.259672","NM_029219","ENSMUSG00000028793","Rnf19b","4930534K13Rik|4930555L03Rik|Ibrdc3","ring finger protein 19B","protein-coding"]
[7943,"chr8",71950123,71951348,"+",0,"NA","promoter-TSS (NM_001164581)","promoter-TSS (NM_001164581)",-331,"NM_001164581",234413,"Mm.334607","NM_001164581","ENSMUSG00000052446","Zfp961","A230105L22Rik|BC065788|mszf37|mszf55-2","zinc finger protein 961","protein-coding"]
[5495,"chr4",40757359,40757844,"+",0,"NA","intron (NM_021535, intron 1 of 11)","CpG",284,"NM_021535",74255,"Mm.289929","NM_021535",null,"Smu1","2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd","smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)","protein-coding"]
[1441,"chr11",97187715,97189122,"+",0,"NA","promoter-TSS (NM_008379)","promoter-TSS (NM_008379)",-526,"NM_008379",16211,"Mm.251013","NM_008379","ENSMUSG00000001440","Kpnb1","AA409963|IPOB|Impnb","karyopherin (importin) beta 1","protein-coding"]
[5328,"chr3",116513251,116513523,"+",0,"NA","intron (NM_010022, intron 1 of 10)","intron (NM_010022, intron 1 of 10)",308,"NM_010022",13171,"Mm.3636","NM_010022","ENSMUSG00000000340","Dbt","D3Wsu60e","dihydrolipoamide branched chain transacylase E2","protein-coding"]
[5868,"chr4",134000431,134001252,"+",0,"NA","promoter-TSS (NM_026144)","promoter-TSS (NM_026144)",23,"NM_026144",67422,"Mm.100290","NM_026144","ENSMUSG00000012117","Dhdds","3222401G21Rik|CIT|DS|HDS|W91638","dehydrodolichyl diphosphate synthase","protein-coding"]
[7554,"chr7",118740346,118741137,"+",0,"NA","exon (NM_027815, exon 1 of 31)","exon (NM_027815, exon 1 of 31)",470,"NM_027815",71517,"Mm.213298","NM_027815","ENSMUSG00000030982","9030624J02Rik","2610029J22Rik","RIKEN cDNA 9030624J02 gene","protein-coding"]
[52,"chr1",36690630,36692070,"+",0,"NA","promoter-TSS (NM_009942)","promoter-TSS (NM_009942)",-137,"NM_009942",12859,"Mm.180182","NM_009942",null,"Cox5b","-","cytochrome c oxidase subunit Vb","protein-coding"]
[3358,"chr17",24549177,24551200,"+",0,"NA","5' UTR (NM_013630, exon 1 of 46)","5' UTR (NM_013630, exon 1 of 46)",238,"NM_013630",18763,"Mm.30435","NM_013630","ENSMUSG00000032855","Pkd1","PC1|mFLJ00285","polycystic kidney disease 1 homolog","protein-coding"]
[188,"chr1",78488221,78489631,"+",0,"NA","promoter-TSS (NM_001278075)","promoter-TSS (NM_001278075)",-29,"NR_102757",23874,"Mm.17898","NM_011811","ENSMUSG00000026245","Farsb","C76708|Farsa|Farsl|Farslb|Frsb","phenylalanyl-tRNA synthetase, beta subunit","protein-coding"]
[1641,"chr11",117076521,117077429,"+",0,"NA","promoter-TSS (NR_105853)","promoter-TSS (NR_105853)",192,"NR_027059",76972,"Mm.309167","NR_027059","ENSMUSG00000086859","Snhg20","2810008D09Rik","small nucleolar RNA host gene 20","ncRNA"]
[7005,"chr6",136937795,136939216,"+",0,"NA","intron (NM_001301301, intron 1 of 5)","intron (NM_001301301, intron 1 of 5)",1022,"NM_001301303",11857,"Mm.2241","NM_007486","ENSMUSG00000030220","Arhgdib","D4|Gdid4|Ly-GDI","Rho, GDP dissociation inhibitor (GDI) beta","protein-coding"]
[1384,"chr11",87425196,87427923,"+",0,"NA","intron (NM_031386, intron 1 of 30)","intron (NM_031386, intron 1 of 30)",-1032,"NM_001199293",83560,"Mm.440758","NM_031386","ENSMUSG00000010342","Tex14","C85585","testis expressed gene 14","protein-coding"]
[2068,"chr13",33903003,33906129,"+",0,"NA","intron (NM_148942, intron 1 of 6)","intron (NM_148942, intron 1 of 6)",1142,"NM_148942",97848,"Mm.272188","NM_148942","ENSMUSG00000052180","Serpinb6c","C76171|C76174|SPI3C|SPIC|ovalbumin","serine (or cysteine) peptidase inhibitor, clade B, member 6c","protein-coding"]
[4428,"chr2",30065782,30067608,"+",0,"NA","5' UTR (NM_001204875, exon 1 of 8)","5' UTR (NM_001204875, exon 1 of 8)",221,"NM_001204875",56086,"Mm.326055","NM_023871","ENSMUSG00000054766","Set","2610030F17Rik|5730420M11Rik|AA407739|I-2PP2A|StF-IT-1|TAF-I","SET nuclear oncogene","protein-coding"]
[5835,"chr4",132308360,132309995,"+",0,"NA","promoter-TSS (NR_029412)","promoter-TSS (NR_029412)",-288,"NR_029412",100310813,"Mm.482271","NR_029412","ENSMUSG00000065097","Snora16a","-","small nucleolar RNA, H/ACA box 16A","snoRNA"]
[464,"chr1",181143734,181144910,"+",0,"NA","promoter-TSS (NM_026171)","promoter-TSS (NM_026171)",-118,"NM_026171",67459,"Mm.263464","NM_026171","ENSMUSG00000026516","Nvl","1200009I24Rik","nuclear VCP-like","protein-coding"]
[2977,"chr15",103009056,103010820,"+",0,"NA","exon (NM_010465, exon 1 of 2)","exon (NM_010465, exon 1 of 2)",376,"NM_010465",15425,"Mm.4444","NM_010465","ENSMUSG00000001661","Hoxc6","Hox-3.3|Hox-6.1","homeobox C6","protein-coding"]
[8194,"chr8",122281590,122283699,"+",0,"NA","intron (NM_009569, intron 1 of 9)","(CCGCG)n|Simple_repeat|Simple_repeat",503,"NM_009569",22761,"Mm.3105","NM_009569","ENSMUSG00000049577","Zfpm1","FOG|Fog1","zinc finger protein, multitype 1","protein-coding"]
[1304,"chr11",77491527,77491952,"+",0,"NA","Intergenic","CpG",-1673,"NM_001004144",216963,"Mm.290182","NM_001004144","ENSMUSG00000011877","Git1","Cat-1|p95Cat","G protein-coupled receptor kinase-interactor 1","protein-coding"]
[7656,"chr7",132575386,132576364,"+",0,"NA","intron (NM_016978, intron 1 of 9)","intron (NM_016978, intron 1 of 9)",523,"NM_016978",18242,"Mm.13694","NM_016978","ENSMUSG00000030934","Oat","AI194874","ornithine aminotransferase","protein-coding"]
[4381,"chr2",25371962,25372964,"+",0,"NA","exon (NM_001081085, exon 1 of 7)","exon (NM_001081085, exon 1 of 7)",428,"NM_001081085",72080,"Mm.250293","NM_001081085","ENSMUSG00000026955","Sapcd2","2010317E24Rik|6030458L21Rik|AL033337|ang","suppressor APC domain containing 2","protein-coding"]
[5550,"chr4",49631479,49632792,"+",0,"NA","promoter-TSS (NM_001163263)","promoter-TSS (NM_001163263)",75,"NM_182999",109331,"Mm.24765","NM_182999","ENSMUSG00000028309","Rnf20","4833430L21Rik|AW540162|C79397|mKIAA4116","ring finger protein 20","protein-coding"]
[8695,"chr9",110877086,110882756,"+",0,"NA","promoter-TSS (NM_001146060)","promoter-TSS (NM_001146060)",162,"NM_146260",20776,"Mm.390229","NM_146260","ENSMUSG00000049555","Tmie","5131400L21Rik|Mm.87012|sr","transmembrane inner ear","protein-coding"]
[4574,"chr2",77945526,77946430,"+",0,"NA","intron (NM_030560, intron 1 of 20)","CpG",378,"NM_001290740",80744,"Mm.288151","NM_030560","ENSMUSG00000027014","Cwc22","AA684037|AI173004|AL022752|B230213M24|mKIAA1604","CWC22 spliceosome-associated protein homolog (S. cerevisiae)","protein-coding"]
[587,"chr10",34281563,34283276,"+",0,"NA","exon (NM_009433, exon 1 of 1)","exon (NM_009433, exon 1 of 1)",229,"NM_009433",22110,"Mm.20445","NM_009433","ENSMUSG00000047514","Tspyl1","Tspyl","testis-specific protein, Y-encoded-like 1","protein-coding"]
[3291,"chr17",6960904,6961439,"+",0,"NA","promoter-TSS (NM_147155)","promoter-TSS (NM_147155)",-15,"NM_147155",380608,"Mm.371734","NM_147155","ENSMUSG00000052031","Tagap1","2610315E15Rik|AA415005|FKSG15","T cell activation GTPase activating protein 1","protein-coding"]
[8088,"chr8",105326095,105327041,"+",0,"NA","promoter-TSS (NM_177449)","promoter-TSS (NM_177449)",204,"NM_025486",66320,"Mm.29990","NM_025486","ENSMUSG00000014856","Tmem208","1700006C06Rik|2610030K20Rik|Hspc171","transmembrane protein 208","protein-coding"]
[4731,"chr2",122738137,122739132,"+",0,"NA","exon (NM_019788, exon 1 of 5)","exon (NM_019788, exon 1 of 5)",129,"NM_019788",18457,"Mm.268921","NM_019788","ENSMUSG00000005804","Bloc1s6","BLOC-1|Pldn|Stx13bp1|pa","biogenesis of lysosomal organelles complex-1, subunit 6, pallidin","protein-coding"]
[6222,"chr5",72866389,72868829,"+",0,"NA","intron (NM_013689, intron 1 of 17)","intron (NM_013689, intron 1 of 17)",839,"NM_001113461",21682,"Mm.319581","NM_013689","ENSMUSG00000029217","Tec","-","tec protein tyrosine kinase","protein-coding"]
[8293,"chr9",21424210,21426069,"+",0,"NA","exon (NM_001253894, exon 1 of 21)","exon (NM_001253894, exon 1 of 21)",231,"NM_001039520",13430,"Mm.433257","NM_007871","ENSMUSG00000033335","Dnm2","Dyn2|Udnm|b2b2159Clo","dynamin 2","protein-coding"]
[8158,"chr8",112010787,112012185,"+",0,"NA","promoter-TSS (NM_053092)","promoter-TSS (NM_053092)",127,"NM_020584",57321,"Mm.213064","NM_020584","ENSMUSG00000033430","Terf2ip","Rap1","telomeric repeat binding factor 2, interacting protein","protein-coding"]
[4373,"chr2",25210906,25211389,"+",0,"NA","exon (NM_021393, exon 1 of 13)","exon (NM_021393, exon 1 of 13)",342,"NM_021393",58202,"Mm.116418","NM_021393","ENSMUSG00000013465","Nelfb","A730008L03Rik|AB041607|AI663983|Cobra1|Nelf-b","negative elongation factor complex member B","protein-coding"]
[8967,"chrX",160994023,160995104,"+",0,"NA","intron (NM_001024624, intron 1 of 18)","CpG",118,"NM_001024624",382253,"Mm.443717","NM_001024624","ENSMUSG00000031292","Cdkl5","BC038161|Stk9","cyclin-dependent kinase-like 5","protein-coding"]
[8687,"chr9",110131028,110132662,"+",0,"NA","promoter-TSS (NM_009211)","promoter-TSS (NM_009211)",-179,"NM_009211",20588,"Mm.85410","NM_009211","ENSMUSG00000032481","Smarcc1","AI115498|BAF155|Rsc8|SRG3|msp3","SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1","protein-coding"]
[2170,"chr13",56521013,56522925,"+",0,"NA","promoter-TSS (NM_178674)","promoter-TSS (NM_178674)",-539,"NM_178674",213311,"Mm.233904","NM_178674","ENSMUSG00000035509","Fbxl21","D630045D17Rik|FBL3B|FBXL3B|Psttm","F-box and leucine-rich repeat protein 21","protein-coding"]
[6560,"chr5",140829760,140830404,"+",0,"NA","exon (NM_010302, exon 1 of 4)","exon (NM_010302, exon 1 of 4)",349,"NM_010302",14673,"Mm.370185","NM_010302",null,"Gna12","AI414047|AI504261|Galpha12","guanine nucleotide binding protein, alpha 12","protein-coding"]
[1709,"chr12",3571171,3572899,"+",0,"NA","promoter-TSS (NM_001162465)","promoter-TSS (NM_001162465)",-356,"NM_001162465",13528,"Mm.286202","NM_007886","ENSMUSG00000071454","Dtnb","-","dystrobrevin, beta","protein-coding"]
[8124,"chr8",107424478,107425026,"+",0,"NA","exon (NM_026277, exon 2 of 9)","exon (NM_026277, exon 2 of 9)",286,"NM_026277",67619,"Mm.334793","NM_026277","ENSMUSG00000003848","Nob1","1700021I09Rik|ART-4|Nob1p|Psmd8bp1","NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)","protein-coding"]
[8833,"chrX",52987855,52989359,"+",0,"NA","intron (NM_013556, intron 1 of 8)","CpG",529,"NM_013556",15452,"Mm.299381","NM_013556","ENSMUSG00000025630","Hprt","C81579|HPGRT|Hprt1","hypoxanthine guanine phosphoribosyl transferase","protein-coding"]
[8068,"chr8",95531791,95532935,"+",0,"NA","Intergenic","RLTR18|LTR|ERVK",-1737,"NM_172914",244608,"Mm.248902","NM_172914","ENSMUSG00000036598","Ccdc113","4933409I22|BC060957","coiled-coil domain containing 113","protein-coding"]
[1297,"chr11",76406947,76407637,"+",0,"NA","exon (NM_023355, exon 1 of 3)","exon (NM_023355, exon 1 of 3)",149,"NM_019818",56322,"Mm.18803","NM_019818","ENSMUSG00000020843","Timm22","Tim22","translocase of inner mitochondrial membrane 22","protein-coding"]
[6237,"chr5",76182535,76185301,"+",0,"NA","promoter-TSS (NM_011626)","promoter-TSS (NM_011626)",38,"NM_011626",21982,"Mm.790","NM_011626","ENSMUSG00000029234","Tmem165","AV026557|Tpardl|Tparl|pFT27","transmembrane protein 165","protein-coding"]
[5572,"chr4",59580389,59582892,"+",0,"NA","promoter-TSS (NM_001301367)","promoter-TSS (NM_001301367)",77,"NM_024255",72479,"Mm.272905","NM_024255","ENSMUSG00000028383","Hsdl2","2610207I16Rik","hydroxysteroid dehydrogenase like 2","protein-coding"]
[494,"chr1",191326039,191326338,"+",0,"NA","intron (NM_025864, intron 1 of 7)","CpG",223,"NM_025864",66950,"Mm.236300","NM_025864",null,"Tmem206","2310028N02Rik|AI118576","transmembrane protein 206","protein-coding"]
[2778,"chr15",76306091,76309308,"+",0,"NA","promoter-TSS (NM_153122)","promoter-TSS (NM_153122)",-454,"NM_153122",75475,"Mm.322738","NM_153122","ENSMUSG00000022562","Oplah","1700010G02Rik","5-oxoprolinase (ATP-hydrolysing)","protein-coding"]
[448,"chr1",179545355,179548189,"+",0,"NA","promoter-TSS (NM_008249)","promoter-TSS (NM_008249)",243,"NM_146105",226744,"Mm.87662","NM_146105","ENSMUSG00000038949","Cnst","9630058J23Rik","consortin, connexin sorting protein","protein-coding"]
[3297,"chr17",10839497,10841142,"+",0,"NA","promoter-TSS (NM_027032)","promoter-TSS (NM_027032)",-65,"NM_016694",50873,"Mm.311110","NM_016694","ENSMUSG00000023826","Park2","PRKN","Parkinson disease (autosomal recessive, juvenile) 2, parkin","protein-coding"]
[7746,"chr8",4612646,4614832,"+",0,"NA","intron (NM_145591, intron 1 of 3)","intron (NM_145591, intron 1 of 3)",569,"NM_145591",233987,"Mm.102799","NM_145591",null,"Zfp958","-","zinc finger protein 958","protein-coding"]
[3557,"chr17",36950824,36952487,"+",0,"NA","5' UTR (NM_029632, exon 1 of 3)","5' UTR (NM_029632, exon 1 of 3)",137,"NM_029632",76497,"Mm.46176","NM_029632","ENSMUSG00000036398","Ppp1r11","1500041B02Rik|AV117883|Hcgv|Tcte5|Tctex-5|Tctex5","protein phosphatase 1, regulatory (inhibitor) subunit 11","protein-coding"]
[6845,"chr6",87671462,87673066,"+",0,"NA","promoter-TSS (NM_001170489)","promoter-TSS (NM_001170489)",-96,"NM_001170489",72103,"Mm.31770","NM_024251","ENSMUSG00000030051","Aplf","2010301N04Rik|AI452191","aprataxin and PNKP like factor","protein-coding"]
[1290,"chr11",75677689,75680162,"+",0,"NA","promoter-TSS (NM_001277219)","promoter-TSS (NM_001277219)",-334,"NM_001277219",12928,"Mm.280125","NM_133656",null,"Crk","Crk-I|Crk-II|Crk-III|Crk3|CrkIII|Crko|c-Crk|p38","v-crk sarcoma virus CT10 oncogene homolog (avian)","protein-coding"]
[2162,"chr13",55635028,55635391,"+",0,"NA","intron (NM_001282055, intron 1 of 22)","CpG",210,"NM_001282055",212880,"Mm.202725","NM_145975","ENSMUSG00000021500","Ddx46","2200005K02Rik|8430438J23Rik|AI325430|AI957095|mKIAA0801","DEAD (Asp-Glu-Ala-Asp) box polypeptide 46","protein-coding"]
[7890,"chr8",69749739,69750955,"+",0,"NA","promoter-TSS (NM_001200023)","promoter-TSS (NM_001200023)",-385,"NM_001200023",620419,"Mm.460423","NM_001200023","ENSMUSG00000092260","Zfp963","-","zinc finger protein 963","protein-coding"]
[6927,"chr6",119847448,119848909,"+",0,"NA","promoter-TSS (NR_104484)","promoter-TSS (NR_104484)",-15,"NR_030776",67289,"Mm.418299","NR_030776",null,"3110021A11Rik","-","RIKEN cDNA 3110021A11 gene","ncRNA"]
[1422,"chr11",95858422,95860047,"+",0,"NA","intron (NR_045187, intron 1 of 1)","CpG",417,"NR_045187",73906,"Mm.399894","NR_045187","ENSMUSG00000086015","4833417C18Rik","-","RIKEN cDNA 4833417C18 gene","ncRNA"]
[5262,"chr3",97657671,97659095,"+",0,"NA","intron (NM_182997, intron 1 of 7)","CpG",171,"NM_182997",108097,"Mm.31175","NM_182997","ENSMUSG00000038205","Prkab2","5730553K21Rik|AW049591|BB124140","protein kinase, AMP-activated, beta 2 non-catalytic subunit","protein-coding"]
[8367,"chr9",44880180,44881284,"+",0,"NA","intron (NM_001081049, intron 1 of 35)","intron (NM_001081049, intron 1 of 35)",542,"NM_001081049",214162,"Mm.2389","NM_001081049","ENSMUSG00000002028","Kmt2a","6430520K01|ALL-1|All1|Cxxc7|HRX|HTRX1|Mll|Mll1|mKIAA4050","lysine (K)-specific methyltransferase 2A","protein-coding"]
[7731,"chr8",3493169,3493973,"+",0,"NA","intron (NM_080461, intron 1 of 1)","CpG",433,"NM_080461",140482,"Mm.299073","NM_080461","ENSMUSG00000047264","Zfp358","Zfend","zinc finger protein 358","protein-coding"]
[5958,"chr4",147848111,147848925,"+",0,"NA","promoter-TSS (NM_198619)","promoter-TSS (NM_198619)",-143,"NM_198619",242747,"Mm.332053","NM_198619","ENSMUSG00000059423","Zfp933","2810408P10Rik","zinc finger protein 933","protein-coding"]
[4315,"chr2",4651659,4652081,"+",0,"NA","intron (NM_026045, intron 1 of 9)","intron (NM_026045, intron 1 of 9)",216,"NM_026045",67229,"Mm.38529","NM_026045","ENSMUSG00000039449","Prpf18","2810441A10Rik","PRP18 pre-mRNA processing factor 18 homolog (yeast)","protein-coding"]
[2588,"chr14",77874537,77874719,"+",0,"NA","intron (NM_025384, intron 1 of 5)","intron (NM_025384, intron 1 of 5)",289,"NM_025384",66148,"Mm.248046","NM_025384","ENSMUSG00000022013","Dnajc15","1110003P16Rik|Dnajd1","DnaJ (Hsp40) homolog, subfamily C, member 15","protein-coding"]
[8398,"chr9",51278574,51278964,"+",0,"NA","promoter-TSS (NM_001195681)","promoter-TSS (NM_001195681)",-215,"NM_001195681",100502940,"Mm.235705","NM_001195681","ENSMUSG00000079559","Gm684","-","predicted gene 684","protein-coding"]
[4141,"chr19",18670012,18670509,"+",0,"NA","promoter-TSS (NM_026120)","promoter-TSS (NM_026120)",-520,"NM_026120",67383,"Mm.306602","NM_026120","ENSMUSG00000024726","Carnmt1","2410127L17Rik","carnosine N-methyltransferase 1","protein-coding"]
[146,"chr1",64956389,64956722,"+",0,"NA","intron (NM_001039493, intron 1 of 7)","CpG",269,"NM_001039493",241075,"Mm.239534","NM_175509","ENSMUSG00000051344","Plekhm3","9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l","pleckstrin homology domain containing, family M, member 3","protein-coding"]
[1351,"chr11",83297777,83299504,"+",0,"NA","intron (NM_134025, intron 1 of 3)","intron (NM_134025, intron 1 of 3)",337,"NM_134025",103737,"Mm.102205","NM_134025","ENSMUSG00000018733","Pex12","AI451906","peroxisomal biogenesis factor 12","protein-coding"]
[528,"chr10",7954812,7956866,"+",0,"NA","5' UTR (NM_138667, exon 1 of 7)","5' UTR (NM_138667, exon 1 of 7)",284,"NM_138667",68652,"Mm.193041","NM_138667","ENSMUSG00000015755","Tab2","1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733","TGF-beta activated kinase 1/MAP3K7 binding protein 2","protein-coding"]
[164,"chr1",74283812,74285425,"+",0,"NA","promoter-TSS (NM_001039509)","promoter-TSS (NM_001039509)",120,"NM_146110",227290,"Mm.379371","NM_146110","ENSMUSG00000006299","Aamp","AU040907|Aamp-rs","angio-associated migratory protein","protein-coding"]
[5030,"chr3",27982410,27984857,"+",0,"NA","promoter-TSS (NM_008875)","promoter-TSS (NM_008875)",-538,"NM_008875",18805,"Mm.212039","NM_008875","ENSMUSG00000027695","Pld1","AA536939|C85393|Pld1a|Pld1b","phospholipase D1","protein-coding"]
[882,"chr10",120226217,120227922,"+",0,"NA","promoter-TSS (NM_025431)","promoter-TSS (NM_025431)",9,"NM_025431",66225,"Mm.291755","NM_025431","ENSMUSG00000020224","Llph","1190005P17Rik","LLP homolog, long-term synaptic facilitation (Aplysia)","protein-coding"]
[8774,"chrX",8175010,8176373,"+",0,"NA","intron (NM_001166437, intron 2 of 6)","CpG",490,"NM_001166437",209815,"Mm.122963","NM_172478","ENSMUSG00000039201","Tbc1d25","6330576A08Rik|DXHXS7927e|Oatl1","TBC1 domain family, member 25","protein-coding"]
[8657,"chr9",108289994,108290966,"+",0,"NA","promoter-TSS (NM_025449)","promoter-TSS (NM_025449)",23,"NM_025449",66257,"Mm.10407","NM_025449","ENSMUSG00000032606","Nicn1","1500032A17Rik","nicolin 1","protein-coding"]
[1364,"chr11",84878470,84883660,"+",0,"NA","promoter-TSS (NM_027388)","promoter-TSS (NM_027388)",-780,"NM_001077636",70325,"Mm.390414","NM_027388","ENSMUSG00000045140","Pigw","2610044A17Rik|Gwt1","phosphatidylinositol glycan anchor biosynthesis, class W","protein-coding"]
[8731,"chr9",121709804,121711113,"+",0,"NA","promoter-TSS (NM_026794)","promoter-TSS (NM_026794)",69,"NM_026794",26901,"Mm.24848","NM_026794","ENSMUSG00000032526","Deb1","1110020I04Rik|AI463209|Ss18l2","differentially expressed in B16F10 1","protein-coding"]
[978,"chr11",5787178,5791322,"+",0,"NA","intron (NM_013810, intron 1 of 12)","intron (NM_013810, intron 1 of 12)",767,"NM_013810",13169,"Mm.256925","NM_013810","ENSMUSG00000020476","Dbnl","Abp1|SH3P7|mAbp1","drebrin-like","protein-coding"]
[2144,"chr13",53472033,53472724,"+",0,"NA","exon (NM_013601, exon 1 of 2)","exon (NM_013601, exon 1 of 2)",402,"NM_013601",17702,"Mm.1763","NM_013601","ENSMUSG00000021469","Msx2","BB122635|Hox-8|Hox8|Hox8.1","msh homeobox 2","protein-coding"]
[4926,"chr2",164820735,164823569,"+",0,"NA","promoter-TSS (NM_028028)","promoter-TSS (NM_028028)",-534,"NM_028028",71971,"Mm.161149","NM_028028","ENSMUSG00000017764","Zswim1","2410003H12Rik|AI850991|BB046916","zinc finger SWIM-type containing 1","protein-coding"]
[3972,"chr18",82909555,82917899,"+",0,"NA","promoter-TSS (NM_001177464)","promoter-TSS (NM_001177464)",-905,"NM_001177464",329003,"Mm.326526","NM_183033","ENSMUSG00000058881","Zfp516","C330029B10Rik|D230016L03|Zfp26l|Znf516|mKIAA0222","zinc finger protein 516","protein-coding"]
[7168,"chr7",27230622,27234585,"+",0,"NA","promoter-TSS (NM_133770)","promoter-TSS (NM_133770)",-410,"NM_133770",76889,"Mm.124728","NM_133770","ENSMUSG00000003762","Adck4","0610012P18Rik","aarF domain containing kinase 4","protein-coding"]
[5689,"chr4",115647530,115649341,"+",0,"NA","promoter-TSS (NM_007823)","promoter-TSS (NM_007823)",-730,"NM_007823",13120,"Mm.1840","NM_007823","ENSMUSG00000028713","Cyp4b1","-","cytochrome P450, family 4, subfamily b, polypeptide 1","protein-coding"]
[1660,"chr11",119267312,119270906,"+",0,"NA","intron (NM_008064, intron 1 of 19)","ID_B1|SINE|B4",1101,"NM_008064",14387,"Mm.4793","NM_008064","ENSMUSG00000025579","Gaa","E430018M07Rik","glucosidase, alpha, acid","protein-coding"]
[3887,"chr18",53861726,53863148,"+",0,"NA","5' UTR (NM_152809, exon 1 of 13)","5' UTR (NM_152809, exon 1 of 13)",324,"NM_152809",70425,"Mm.368668","NM_152809","ENSMUSG00000073563","Csnk1g3","3300002K07Rik|C330049O21Rik","casein kinase 1, gamma 3","protein-coding"]
[5146,"chr3",88325062,88325651,"+",0,"NA","intron (NM_020003, intron 1 of 5)","intron (NM_020003, intron 1 of 5)",333,"NM_020003",56700,"Mm.439922","NM_020003",null,"Glmp","0610031J06Rik|AB027141|NCU-G1","glycosylated lysosomal membrane protein","protein-coding"]
[2843,"chr15",81465516,81467270,"+",0,"NA","promoter-TSS (NM_019712)","promoter-TSS (NM_019712)",77,"NM_019712",56438,"Mm.29405","NM_019712","ENSMUSG00000022400","Rbx1","1500002P15Rik|AA517855|ROC1","ring-box 1","protein-coding"]
[5418,"chr3",157946567,157948057,"+",0,"NA","promoter-TSS (NM_001013806)","promoter-TSS (NM_001013806)",-154,"NM_001013806",433667,"Mm.265806","NM_001013806",null,"Ankrd13c","AI505652|AU022220","ankyrin repeat domain 13c","protein-coding"]
[8447,"chr9",58253337,58253879,"+",0,"NA","intron (NM_026942, intron 1 of 6)","intron (NM_026942, intron 1 of 6)",444,"NM_026942",69106,"Mm.216502","NM_026942","ENSMUSG00000032333","Stoml1","1810015E19Rik|AI847431|SLP1|STORP|UNC24|WPB72","stomatin-like 1","protein-coding"]
[8388,"chr9",50494061,50495691,"+",0,"NA","intron (NM_029639, intron 1 of 3)","intron (NM_029639, intron 1 of 3)",351,"NM_029639",76509,"Mm.29959","NM_029639","ENSMUSG00000032068","Plet1","0610037B23Rik|1600029D21Rik|AA407923|AU043048","placenta expressed transcript 1","protein-coding"]
[7509,"chr7",109438809,109439464,"+",0,"NA","promoter-TSS (NM_054103)","promoter-TSS (NM_054103)",-83,"NM_054103",117229,"Mm.389950","NM_054103","ENSMUSG00000031027","Stk33","4921505G21Rik|AW061264","serine/threonine kinase 33","protein-coding"]
[3782,"chr18",20113047,20115440,"+",0,"NA","intron (NM_013504, intron 1 of 16)","intron (NM_013504, intron 1 of 16)",530,"NM_001291804",13505,"Mm.33740","NM_013504",null,"Dsc1","1110020A10Rik|AI507491|Dsc1a|Dsc1b","desmocollin 1","protein-coding"]
[7350,"chr7",63934706,63940152,"+",0,"NA","intron (NM_021366, intron 1 of 1)","CpG",1486,"NM_021366",50794,"Mm.240473","NM_021366","ENSMUSG00000052040","Klf13","0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1","Kruppel-like factor 13","protein-coding"]
[5039,"chr3",32509147,32511241,"+",0,"NA","promoter-TSS (NM_144519)","promoter-TSS (NM_144519)",-356,"NM_001161818",67778,"Mm.285620","NM_144519","ENSMUSG00000027667","Zfp639","6230400O18Rik|ANC-2H01|ZASC1|Znf639","zinc finger protein 639","protein-coding"]
[2785,"chr15",76575933,76577288,"+",0,"NA","intron (NR_073123, intron 1 of 14)","intron (NR_073123, intron 1 of 14)",251,"NR_073123",268822,"Mm.181624","NM_172960","ENSMUSG00000022550","Adck5","A230108P17","aarF domain containing kinase 5","protein-coding"]
[2870,"chr15",84856309,84856462,"+",0,"NA","promoter-TSS (NR_030731)","promoter-TSS (NR_030731)",-256,"NR_030731",271305,"Mm.101022","NM_001081166","ENSMUSG00000016624","Phf21b","A730032D07Rik","PHD finger protein 21B","protein-coding"]
[6764,"chr6",57691386,57692410,"+",0,"NA","exon (NM_025574, exon 1 of 2)","exon (NM_025574, exon 1 of 2)",180,"NM_025574",66459,"Mm.44201","NM_025574",null,"Pyurf","2610022G08Rik|AI847956|Prey","Pigy upstream reading frame","protein-coding"]
[7706,"chr7",142094179,142097019,"+",0,"NA","promoter-TSS (NM_008748)","promoter-TSS (NM_008748)",-315,"NM_008748",18218,"Mm.39725","NM_008748","ENSMUSG00000037887","Dusp8","5530400B01Rik|AI593498|Nttp1","dual specificity phosphatase 8","protein-coding"]
[6983,"chr6",129012572,129015060,"+",0,"NA","promoter-TSS (NM_001277202)","promoter-TSS (NM_001277202)",-296,"NM_001277202",435921,"Mm.489572","NM_001277202",null,"Clec2f","Clec2f-ps|Clr-c|Clrc|Clrz","C-type lectin domain family 2, member f","protein-coding"]
[7682,"chr7",140954673,140957365,"+",0,"NA","promoter-TSS (NM_030694)","promoter-TSS (NM_030694)",-58,"NM_030694",80876,"Mm.379266","NM_030694","ENSMUSG00000060591","Ifitm2","DSPA2c|Ifitm3l|fragilis3|mil-3","interferon induced transmembrane protein 2","protein-coding"]
[6392,"chr5",120846721,120848141,"+",0,"NA","promoter-TSS (NM_145153)","promoter-TSS (NM_145153)",64,"NM_145153",243262,"Mm.105369","NM_145153","ENSMUSG00000053765","Oas1f","-","2'-5' oligoadenylate synthetase 1F","protein-coding"]
[6191,"chr5",53266492,53267618,"+",0,"NA","promoter-TSS (NM_001145433)","promoter-TSS (NM_001145433)",-51,"NM_001145433",66278,"Mm.27900","NM_001145433","ENSMUSG00000061461","Smim20","1110067B18Rik|1810013D10Rik|N28078","small integral membrane protein 20","protein-coding"]
[3176,"chr16",45651982,45654986,"+",0,"NA","intron (NM_145389, intron 1 of 5)","intron (NM_145389, intron 1 of 5)",634,"NM_145389",212998,"Mm.97511","NM_145389","ENSMUSG00000033187","BC016579","-","cDNA sequence, BC016579","protein-coding"]
[7115,"chr7",19403431,19404547,"+",0,"NA","intron (NM_001286039, intron 1 of 12)","CpG",115,"NM_001286039",232943,"Mm.213403","NM_146182","ENSMUSG00000040714","Klc3","BC017147|Klct","kinesin light chain 3","protein-coding"]
[3819,"chr18",34005535,34007319,"+",0,"NA","intron (NM_013512, intron 1 of 23)","CpG-6813",779,"NM_013512",13824,"Mm.3465","NM_013512","ENSMUSG00000024376","Epb41l4a","Epb4.1l4|Epb4.1l4a|NBL4","erythrocyte membrane protein band 4.1 like 4a","protein-coding"]
[7724,"chr7",144914787,144915871,"+",0,"NA","exon (NM_028184, exon 1 of 5)","exon (NM_028184, exon 1 of 5)",135,"NM_028184",72284,"Mm.273049","NM_028184","ENSMUSG00000031072","Oraov1","2210010N10Rik|TAOS1","oral cancer overexpressed 1","protein-coding"]
[1471,"chr11",98793857,98796786,"+",0,"NA","promoter-TSS (NM_028722)","promoter-TSS (NM_028722)",-448,"NM_028722",74026,"Mm.258352","NM_028722","ENSMUSG00000052915","Msl1","2810017F12Rik|4121402D02Rik|4930463F05Rik|AA682082|Msl-1","male-specific lethal 1 homolog (Drosophila)","protein-coding"]
[3379,"chr17",25239959,25240507,"+",0,"NA","promoter-TSS (NM_001163718)","promoter-TSS (NM_001163718)",63,"NM_026676",68327,"Mm.180687","NM_026676","ENSMUSG00000015126","Tsr3","0610007P22Rik|1110014B11Rik|AL022759","TSR3 20S rRNA accumulation","protein-coding"]
[373,"chr1",161033269,161037976,"+",0,"NA","non-coding (NR_002840, exon 1 of 4)","non-coding (NR_002840, exon 1 of 4)",456,"NR_002840",14455,"Mm.270065","NR_002840","ENSMUSG00000053332","Gas5","Gas-5|Mir5117","growth arrest specific 5","ncRNA"]
[5609,"chr4",88721482,88723873,"+",0,"NA","promoter-TSS (NM_172871)","promoter-TSS (NM_172871)",-169,"NM_172871",242521,"Mm.260601","NM_172871","ENSMUSG00000070923","Klhl9","8030469P05|C530050O22Rik|ENSMUSG00000070923|mKIAA1354","kelch-like 9","protein-coding"]
[1752,"chr12",28749949,28752317,"+",0,"NA","promoter-TSS (NM_178811)","promoter-TSS (NM_178811)",-680,"NM_178811",217449,"Mm.132006","NM_178811","ENSMUSG00000020628","Trappc12","CGI-87|D930014A20Rik|Ttc15","trafficking protein particle complex 12","protein-coding"]
[5352,"chr3",127779724,127780434,"+",0,"NA","intron (NM_027808, intron 1 of 13)","intron (NM_027808, intron 1 of 13)",448,"NM_027808",71481,"Mm.158704","NM_027808","ENSMUSG00000028028","Alpk1","8430410J10Rik|LAK","alpha-kinase 1","protein-coding"]
[1622,"chr11",116026610,116031724,"+",0,"NA","Intergenic","RSINE1|SINE|B4",-1149,"NM_001286006",217331,"Mm.297706","NM_172569","ENSMUSG00000020770","Unk","B230379M23Rik|Zc3h5|Zc3hdc5|mKIAA1753","unkempt homolog (Drosophila)","protein-coding"]
[4457,"chr2",32236015,32237169,"+",0,"NA","promoter-TSS (NM_145145)","promoter-TSS (NM_145145)",-91,"NM_145145",99011,"Mm.31192","NM_145145","ENSMUSG00000039254","Pomt1","AI505244","protein-O-mannosyltransferase 1","protein-coding"]
[7901,"chr8",70211795,70212231,"+",0,"NA","intron (NM_001007570, intron 1 of 7)","CpG",268,"NM_001007570",73095,"Mm.185413","NM_001007570","ENSMUSG00000002346","Slc25a42","2900084M01Rik","solute carrier family 25, member 42","protein-coding"]
[3572,"chr17",43666623,43667817,"+",0,"NA","promoter-TSS (NM_028711)","promoter-TSS (NM_028711)",-152,"NM_001285948",56050,"Mm.17991","NM_018887","ENSMUSG00000023963","Cyp39a1","mCYP39A1","cytochrome P450, family 39, subfamily a, polypeptide 1","protein-coding"]
[534,"chr10",11343078,11344071,"+",0,"NA","exon (NM_010146, exon 1 of 4)","exon (NM_010146, exon 1 of 4)",129,"NM_010146",13853,"Mm.89946","NM_010146",null,"Epm2a","TG-B|Tg(TcraK,TcrbK)TG-BFlv","epilepsy, progressive myoclonic epilepsy, type 2 gene alpha","protein-coding"]
[8478,"chr9",64340089,64342674,"+",0,"NA","promoter-TSS (NM_001001295)","promoter-TSS (NM_001001295)",-124,"NM_001001295",213550,"Mm.268341","NM_172519","ENSMUSG00000032396","Dis3l","AV340375","DIS3 mitotic control homolog (S. cerevisiae)-like","protein-coding"]
[5347,"chr3",122983463,122987694,"+",0,"NA","Intergenic","Intergenic",-1131,"NM_133857",99526,"Mm.491248","NM_133857","ENSMUSG00000039701","Usp53","AA939927|Phxr3|Sp6|mKIAA1350","ubiquitin specific peptidase 53","protein-coding"]
[475,"chr1",183296509,183297874,"+",0,"NA","promoter-TSS (NM_027861)","promoter-TSS (NM_027861)",131,"NM_181732",108909,"Mm.290502","NM_145626",null,"Aida","2610208M17Rik|BC004835","axin interactor, dorsalization associated","protein-coding"]
[1525,"chr11",102087139,102089590,"+",0,"NA","intron (NM_016695, intron 1 of 12)","intron (NM_016695, intron 1 of 12)",151,"NM_016695",50997,"Mm.36242","NM_016695","ENSMUSG00000017314","Mpp2","D11Bwg0652e|Dlg2|Dlgh2|Pals4","membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)","protein-coding"]
[2545,"chr14",65968679,65969336,"+",0,"NA","intron (NM_013492, intron 1 of 8)","intron (NM_013492, intron 1 of 8)",524,"NM_013492",12759,"Mm.200608","NM_013492","ENSMUSG00000022037","Clu","AI893575|ApoJ|Cli|D14Ucla3|SP-40|Sgp-2|Sgp2|Sugp-2","clusterin","protein-coding"]
[3534,"chr17",35666987,35668073,"+",0,"NA","promoter-TSS (NM_175137)","promoter-TSS (NM_175137)",62,"NM_175137",68915,"Mm.32002","NM_175137","ENSMUSG00000038838","Vars2","1190004I24Rik|Vars2l|mKIAA1885","valyl-tRNA synthetase 2, mitochondrial (putative)","protein-coding"]
[1327,"chr11",78751448,78751993,"+",0,"NA","promoter-TSS (NM_197989)","promoter-TSS (NM_197989)",9,"NM_197989",69109,"Mm.341420","NM_197989","ENSMUSG00000049489","Fam58b","1810009O10Rik|Fam58a","family with sequence similarity 58, member B","protein-coding"]
[7785,"chr8",22593144,22594543,"+",0,"NA","promoter-TSS (NM_001198998)","promoter-TSS (NM_001198998)",-30,"NM_011696",22335,"Mm.227704","NM_011696","ENSMUSG00000008892","Vdac3","-","voltage-dependent anion channel 3","protein-coding"]
[6945,"chr6",122601985,122602887,"+",0,"NA","promoter-TSS (NM_031159)","promoter-TSS (NM_031159)",8,"NM_031159",11810,"Mm.3333","NM_031159","ENSMUSG00000040613","Apobec1","Cdar1","apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1","protein-coding"]
[8508,"chr9",69451317,69460751,"+",0,"NA","promoter-TSS (NR_037296)","promoter-TSS (NR_037296)",-910,"NR_037296",100526560,null,"NR_037296","ENSMUSG00000093042","Mir3109","mir-3109|mmu-mir-3109","microRNA 3109","ncRNA"]
[5942,"chr4",141537651,141539097,"+",0,"NA","5' UTR (NM_019763, exon 1 of 16)","5' UTR (NM_019763, exon 1 of 16)",223,"NM_019763",56381,"Mm.299906","NM_019763","ENSMUSG00000040761","Spen","Mint|mKIAA0929","SPEN homolog, transcriptional regulator (Drosophila)","protein-coding"]
[1599,"chr11",114668681,114669746,"+",0,"NA","intron (NM_023372, intron 3 of 4)","PB1D9|SINE|Alu",432,"NM_001048058",67671,"Mm.238817","NM_023372","ENSMUSG00000057322","Rpl38","0610025G13Rik|Rbt|Ts|Tss","ribosomal protein L38","protein-coding"]
[1149,"chr11",59183817,59184751,"+",0,"NA","intron (NM_001159410, intron 7 of 7)","intron (NM_001159410, intron 7 of 7)",-1071,"NM_080454",118454,"Mm.40016","NM_080454","ENSMUSG00000043448","Gjc2","B230382L12Rik|Cx47|Gja12","gap junction protein, gamma 2","protein-coding"]
[2866,"chr15",84167811,84172371,"+",0,"NA","intron (NM_054088, intron 1 of 7)","intron (NM_054088, intron 1 of 7)",1821,"NR_105816",102466642,null,"NR_105816","ENSMUSG00000098882","Mir6392","Gm27431|mmu-mir-6392","microRNA 6392","ncRNA"]
[8146,"chr8",111258219,111259509,"+",0,"NA","exon (NM_009149, exon 1 of 26)","exon (NM_009149, exon 1 of 26)",338,"NM_009149",20340,"Mm.276271","NM_009149","ENSMUSG00000003316","Glg1","AI593353|AW537898|CFR|CFR-1|ESL-1|MG-160|MG160|Selel","golgi apparatus protein 1","protein-coding"]
[255,"chr1",105989772,105992420,"+",0,"NA","exon (NM_001122676, exon 1 of 14)","exon (NM_001122676, exon 1 of 14)",690,"NM_001122675",227449,"Mm.210188","NM_001122675","ENSMUSG00000038866","Zcchc2","9930114B20Rik|AW212015","zinc finger, CCHC domain containing 2","protein-coding"]
[5364,"chr3",132683223,132684954,"+",0,"NA","promoter-TSS (NM_001163455)","promoter-TSS (NM_001163455)",-56,"NM_001163455",271981,"Mm.257864","NM_173032","ENSMUSG00000028030","Tbck","1700120J03Rik|9430001M19|A630047E20Rik|C030007I09Rik|Tbckl","TBC1 domain containing kinase","protein-coding"]
[7380,"chr7",79465502,79466250,"+",0,"NA","intron (NM_017462, intron 1 of 22)","CpG",397,"NM_017462",18975,"Mm.3616","NM_017462","ENSMUSG00000039176","Polg","AA409516|PolgA","polymerase (DNA directed), gamma","protein-coding"]
[7945,"chr8",72160473,72162053,"+",0,"NA","promoter-TSS (NM_023126)","promoter-TSS (NM_023126)",63,"NM_023126",17274,"Mm.162811","NM_023126",null,"Rab8a","AA409338|Mel","RAB8A, member RAS oncogene family","protein-coding"]
[692,"chr10",71343984,71349521,"+",0,"NA","Intergenic","MLTR25A|LTR|ERVK",-1041,"NM_027184",69718,"Mm.245867","NM_027184","ENSMUSG00000060733","Ipmk","2410017C19Rik|AA408208|Impk","inositol polyphosphate multikinase","protein-coding"]
[1907,"chr12",85373716,85375409,"+",0,"NA","exon (NM_026775, exon 1 of 5)","exon (NM_026775, exon 1 of 5)",155,"NM_026775",68581,"Mm.379159","NM_026775","ENSMUSG00000021248","Tmed10","1110014C03Rik|Tmp21|p23|p24delta1","transmembrane emp24-like trafficking protein 10 (yeast)","protein-coding"]
[854,"chr10",110919783,110920683,"+",0,"NA","promoter-TSS (NM_007792)","promoter-TSS (NM_007792)",57,"NM_007792",13008,"Mm.2020","NM_007792","ENSMUSG00000020186","Csrp2","AW551867|Crp2|SmLim","cysteine and glycine-rich protein 2","protein-coding"]
[6575,"chr5",143548119,143551232,"+",0,"NA","intron (NM_133703, intron 1 of 1)","intron (NM_133703, intron 1 of 1)",969,"NM_026050",67238,"Mm.383219","NM_026050","ENSMUSG00000083012","Fam220a","1500026F15Rik|2810453I06Rik|AW047776|Acpin1|Sipar","family with sequence similarity 220, member A","protein-coding"]
[4023,"chr19",5117671,5118920,"+",0,"NA","non-coding (NR_045528, exon 1 of 16)","non-coding (NR_045528, exon 1 of 16)",113,"NR_045528",16594,"Mm.271648","NM_008451","ENSMUSG00000024862","Klc2","8030455F02Rik|AW212649|KLC 2|KLC-2","kinesin light chain 2","protein-coding"]
[7276,"chr7",43671802,43673280,"+",0,"NA","intron (NM_145582, intron 1 of 2)","intron (NM_145582, intron 1 of 2)",510,"NM_145582",233189,"Mm.26514","NM_145582","ENSMUSG00000038888","Ctu1","Atpbd3|BC005752","cytosolic thiouridylase subunit 1 homolog (S. pombe)","protein-coding"]
[1520,"chr11",101580982,101582605,"+",0,"NA","promoter-TSS (NM_144830)","promoter-TSS (NM_144830)",-449,"NM_144830",217203,"Mm.280559","NM_144830","ENSMUSG00000034947","Tmem106a","0610008L10Rik|AI043106|BC022145","transmembrane protein 106A","protein-coding"]
[614,"chr10",43220885,43221932,"+",0,"NA","promoter-TSS (NM_001168289)","promoter-TSS (NM_001168289)",-78,"NM_027772",71365,"Mm.490430","NM_027772","ENSMUSG00000038240","Pdss2","5430420P03Rik|Gm60|Plmp|kd|mDLP1","prenyl (solanesyl) diphosphate synthase, subunit 2","protein-coding"]
[1765,"chr12",33429288,33430249,"+",0,"NA","exon (NM_172253, exon 1 of 4)","exon (NM_172253, exon 1 of 4)",144,"NM_172253",28071,"Mm.196472","NM_172253","ENSMUSG00000020561","Twistnb","2410173G11|2810024J17Rik|D16Wsu83e","twist basic helix-loop-helix transcription factor 1 neighbor","protein-coding"]
[6850,"chr6",88019639,88019792,"+",0,"NA","promoter-TSS (NM_001293655)","promoter-TSS (NM_001293655)",80,"NM_001293654",19349,"Mm.333233","NM_009005","ENSMUSG00000079477","Rab7","Rab7a","RAB7, member RAS oncogene family","protein-coding"]
[6005,"chr4",153974419,153975656,"+",0,"NA","promoter-TSS (NM_177673)","promoter-TSS (NM_177673)",44,"NM_007859",13368,"Mm.388918","NM_007859","ENSMUSG00000029027","Dffb","40kDa|5730477D02Rik|CAD|CPAN|DFF40|Didff","DNA fragmentation factor, beta subunit","protein-coding"]
[2239,"chr13",77708363,77709197,"+",0,"NA","promoter-TSS (NR_028109)","promoter-TSS (NR_028109)",90,"NM_001163419",68675,"Mm.343005","NM_138312","ENSMUSG00000064138","Fam172a","1110033M05Rik|2610318O14Rik|53-E6|9430037D06Rik|AF064782|pEN87","family with sequence similarity 172, member A","protein-coding"]
[7488,"chr7",102209279,102211873,"+",0,"NA","promoter-TSS (NM_001287164)","promoter-TSS (NM_001287164)",241,"NM_001291358",233575,"Mm.302013","NM_145583","ENSMUSG00000030990","Pgap2","1810006G21Rik|C76649|Frag1","post-GPI attachment to proteins 2","protein-coding"]
[3029,"chr16",13667387,13668743,"+",0,"NA","5' UTR (NM_028761, exon 1 of 24)","5' UTR (NM_028761, exon 1 of 24)",105,"NM_028761",74108,"Mm.182350","NM_028761","ENSMUSG00000022685","Parn","1200003I18Rik|DAN","poly(A)-specific ribonuclease (deadenylation nuclease)","protein-coding"]
[2917,"chr15",98144726,98146121,"+",0,"NA","intron (NM_001170711, intron 1 of 3)","CpG",279,"NM_030121",78541,"Mm.200766","NM_030121","ENSMUSG00000048175","Asb8","4930539L19Rik|AI788835|C430011H06Rik","ankyrin repeat and SOCS box-containing 8","protein-coding"]
[832,"chr10",94147293,94148360,"+",0,"NA","promoter-TSS (NM_011629)","promoter-TSS (NM_011629)",-105,"NM_011629",22025,"Mm.107483","NM_011629","ENSMUSG00000005897","Nr2c1","4831444H07Rik|80.3|Eenr|TR2|Tr2-11","nuclear receptor subfamily 2, group C, member 1","protein-coding"]
[1831,"chr12",71135804,71137871,"+",0,"NA","promoter-TSS (NM_029818)","promoter-TSS (NM_029818)",-11,"NM_029818",76967,"Mm.87290","NM_029818","ENSMUSG00000034601","2700049A03Rik","Talpid3|mKIAA0586","RIKEN cDNA 2700049A03 gene","protein-coding"]
[8587,"chr9",98986531,98986976,"+",0,"NA","intron (NM_011810, intron 1 of 4)","CpG",380,"NM_011810",23873,"Mm.74605","NM_011810","ENSMUSG00000032463","Faim","-","Fas apoptotic inhibitory molecule","protein-coding"]
[5519,"chr4",43578137,43579526,"+",0,"NA","promoter-TSS (NM_172866)","promoter-TSS (NM_172866)",33,"NM_172692",230101,"Mm.229444","NM_172692","ENSMUSG00000028467","Gba2","F630034E04","glucosidase beta 2","protein-coding"]
[424,"chr1",172082107,172083349,"+",0,"NA","promoter-TSS (NM_021607)","promoter-TSS (NM_021607)",21,"NM_021607",59287,"Mm.218203","NM_021607","ENSMUSG00000003458","Ncstn","9430068N19Rik|AA727311|Aph2|D1Dau13e|Kiaa0253|Nct|mKIAA0253","nicastrin","protein-coding"]
[6786,"chr6",71908369,71909643,"+",0,"NA","promoter-TSS (NM_009088)","promoter-TSS (NM_009088)",-47,"NM_009088",20019,"Mm.135581","NM_009088","ENSMUSG00000049553","Polr1a","194kDa|3010014K16Rik|RPA194|Rpo1-4|mRPA1","polymerase (RNA) I polypeptide A","protein-coding"]
[6333,"chr5",110807161,110810852,"+",0,"NA","exon (NM_009469, exon 3 of 28)","exon (NM_009469, exon 3 of 28)",1075,"NM_009469",22241,"Mm.271898","NM_009469","ENSMUSG00000029512","Ulk1","AU041434|Unc51.1|mKIAA0722","unc-51 like kinase 1","protein-coding"]
[347,"chr1",153486957,153487614,"+",0,"NA","intron (NM_007842, intron 1 of 27)","CpG",375,"NM_007842",13211,"Mm.20000","NM_007842","ENSMUSG00000042699","Dhx9","AI326842|Ddx9|HEL-5|NDHII|RHA|mHEL-5","DEAH (Asp-Glu-Ala-His) box polypeptide 9","protein-coding"]
[3165,"chr16",42876144,42877352,"+",0,"NA","promoter-TSS (NR_040522)","promoter-TSS (NR_040522)",-986,"NR_040522",75722,"Mm.243747","NR_040521","ENSMUSG00000075070","4932412D23Rik","ENSMUSG00000075070|Gm10809","RIKEN cDNA 4932412D23 gene","ncRNA"]
[8127,"chr8",109565001,109566642,"+",0,"NA","promoter-TSS (NM_178380)","promoter-TSS (NM_178380)",-165,"NM_175646",234723,"Mm.37667","NM_175646","ENSMUSG00000031723","Txnl4b","AI595343|D530025J19Rik|DLP|Dim2","thioredoxin-like 4B","protein-coding"]
[5920,"chr4",138913483,138913806,"+",0,"NA","exon (NM_028453, exon 1 of 8)","exon (NM_028453, exon 1 of 8)",303,"NM_028453",73162,"Mm.238081","NM_028453","ENSMUSG00000041161","Otud3","3110030K17Rik","OTU domain containing 3","protein-coding"]
[3129,"chr16",32419789,32420286,"+",0,"NA","intron (NM_025329, intron 1 of 4)","CpG",335,"NM_025329",66061,"Mm.302693","NM_025329","ENSMUSG00000014075","Tctex1d2","0610012D17Rik|2410011K15Rik","Tctex1 domain containing 2","protein-coding"]
[1116,"chr11",53348203,53352674,"+",0,"NA","promoter-TSS (NM_033565)","promoter-TSS (NM_033565)",-329,"NM_033565",93736,"Mm.395281","NM_033565","ENSMUSG00000049470","Aff4","AF5Q31|Alf4|Laf4l|MCEF","AF4/FMR2 family, member 4","protein-coding"]
[4413,"chr2",28582532,28583860,"+",0,"NA","promoter-TSS (NM_148928)","promoter-TSS (NM_148928)",83,"NM_148928",70239,"Mm.274120","NM_148928","ENSMUSG00000026816","Gtf3c5","2700084A09Rik|TFIIIC63|TFiiiC2-63","general transcription factor IIIC, polypeptide 5","protein-coding"]
[4965,"chr2",173275207,173276853,"+",0,"NA","intron (NM_022995, intron 1 of 3)","intron (NM_022995, intron 1 of 3)",503,"NM_022995",65112,"Mm.73682","NM_022995","ENSMUSG00000038400","Pmepa1","2210418I02Rik|AW455466|Erg1.2|N4wbp4|Stag1|Tmepai","prostate transmembrane protein, androgen induced 1","protein-coding"]
[5827,"chr4",131843149,131843945,"+",0,"NA","promoter-TSS (NM_025297)","promoter-TSS (NM_025297)",76,"NM_025297",26922,"Mm.192706","NM_025297","ENSMUSG00000028910","Mecr","AI195831|Nrbf1","mitochondrial trans-2-enoyl-CoA reductase","protein-coding"]
[2834,"chr15",80263691,80264785,"+",0,"NA","promoter-TSS (NM_175109)","promoter-TSS (NM_175109)",68,"NM_175109",66538,"Mm.39485","NM_175109","ENSMUSG00000051518","Rps19bp1","2510038A11Rik|AI604923|S19BP","ribosomal protein S19 binding protein 1","protein-coding"]
[1127,"chr11",54859723,54861946,"+",0,"NA","promoter-TSS (NM_029327)","promoter-TSS (NM_029327)",-243,"NM_029327",75530,"Mm.83578","NM_029327","ENSMUSG00000020268","Lyrm7","1700024C24Rik|9330147L21Rik","LYR motif containing 7","protein-coding"]
[2222,"chr13",73603540,73605283,"+",0,"NA","intron (NM_146047, intron 1 of 16)","CpG",409,"NM_146047",218335,"Mm.30099","NM_146047","ENSMUSG00000021610","Clptm1l","C130052I12Rik|Crr9","CLPTM1-like","protein-coding"]
[6154,"chr5",35574636,35575588,"+",0,"NA","promoter-TSS (NM_030208)","promoter-TSS (NM_030208)",-42,"NM_030208",78890,"Mm.98522","NM_030208",null,"Trmt44","2310079F23Rik|Mettl19","tRNA methyltransferase 44","protein-coding"]
[4524,"chr2",59160073,59161899,"+",0,"NA","5' UTR (NM_175464, exon 1 of 21)","5' UTR (NM_175464, exon 1 of 21)",136,"NM_175464",227937,"Mm.260938","NM_026361","ENSMUSG00000026991","Pkp4","5031422I09Rik|9430019K17Rik|Armrp|p0071","plakophilin 4","protein-coding"]
[801,"chr10",84575486,84577567,"+",0,"NA","promoter-TSS (NM_146008)","promoter-TSS (NM_146008)",-421,"NM_146008",216198,"Mm.296142","NM_146008","ENSMUSG00000020034","Tcp11l2","E430026E19Rik","t-complex 11 (mouse) like 2","protein-coding"]
[8165,"chr8",117155233,117159847,"+",0,"NA","promoter-TSS (NM_001081151)","promoter-TSS (NM_001081151)",-595,"NM_001081151",209239,"Mm.132992","NM_001081151","ENSMUSG00000052557","Gan","A330045G18|gigaxonin","giant axonal neuropathy","protein-coding"]
[1003,"chr11",17158656,17161301,"+",0,"NA","intron (NM_024459, intron 1 of 5)","CpG",680,"NM_024459",19058,"Mm.41840","NM_024459","ENSMUSG00000033953","Ppp3r1","CaNB1|Cnb1|MCIP1","protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)","protein-coding"]
[1717,"chr12",4842030,4843875,"+",0,"NA","promoter-TSS (NM_001170858)","promoter-TSS (NM_001170858)",-351,"NM_173416",238037,"Mm.146087","NM_173416","ENSMUSG00000051721","BC068281","A430092C04","cDNA sequence BC068281","protein-coding"]
[2557,"chr14",70159225,70160147,"+",0,"NA","promoter-TSS (NM_001004155)","promoter-TSS (NM_001004155)",-184,"NM_001004155",268759,"Mm.12148","NM_001004155","ENSMUSG00000044551","9930012K11Rik","-","RIKEN cDNA 9930012K11 gene","protein-coding"]
[7067,"chr7",12422068,12422665,"+",0,"NA","intron (NM_001033820, intron 1 of 3)","intron (NM_001033820, intron 1 of 3)",125,"NM_001033820",619331,"Mm.361832","NM_001033820","ENSMUSG00000034071","Zfp551","9630004E07Rik|Znf551","zinc fingr protein 551","protein-coding"]
[2486,"chr14",55577955,55578946,"+",0,"NA","promoter-TSS (NM_011189)","promoter-TSS (NM_011189)",-44,"NM_011189",19186,"Mm.830","NM_011189","ENSMUSG00000022216","Psme1","AW413925|PA28a","proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)","protein-coding"]
[2317,"chr13",112926477,112928465,"+",0,"NA","promoter-TSS (NM_028151)","promoter-TSS (NM_028151)",-91,"NM_028151",72198,"Mm.291029","NM_028151","ENSMUSG00000016018","Skiv2l2","2610528A15Rik|mKIAA0052","superkiller viralicidic activity 2-like 2 (S. cerevisiae)","protein-coding"]
[6015,"chr4",155249451,155250881,"+",0,"NA","non-coding (NR_033802, exon 1 of 3)","non-coding (NR_033802, exon 1 of 3)",200,"NR_033802",67513,"Mm.10374","NM_001190445","ENSMUSG00000073684","Faap20","2610002J02Rik","Fanconi anemia core complex associated protein 20","protein-coding"]
[1666,"chr11",119912609,119914406,"+",0,"NA","promoter-TSS (NM_001085498)","promoter-TSS (NM_001085498)",-303,"NM_001085498",208092,"Mm.306673","NM_001085498","ENSMUSG00000025371","Chmp6","2400004G01Rik","charged multivesicular body protein 6","protein-coding"]
[2741,"chr15",66577242,66578317,"+",0,"NA","5' UTR (NM_001081409, exon 1 of 21)","5' UTR (NM_001081409, exon 1 of 21)",207,"NM_001081409",239510,"Mm.267473","NM_178718","ENSMUSG00000072501","Phf20l1","CGI-72|E130113K22Rik","PHD finger protein 20-like 1","protein-coding"]
[2251,"chr13",90922514,90923952,"+",0,"NA","intron (NM_024175, intron 1 of 3)","CpG",111,"NM_024175",66475,"Mm.306302","NM_024175",null,"Rps23","2410044J15Rik","ribosomal protein S23","protein-coding"]
[8721,"chr9",120110403,120111502,"+",0,"NA","intron (NM_144793, intron 1 of 6)","intron (NM_144793, intron 1 of 6)",553,"NM_144793",208638,"Mm.236656","NM_144793","ENSMUSG00000032519","Slc25a38","AV019094|BC010801","solute carrier family 25, member 38","protein-coding"]
[564,"chr10",21986451,21986614,"+",0,"NA","intron (NM_001161848, intron 1 of 11)","ORR1D1|LTR|ERVL-MaLR",428,"NM_001161848",20393,"Mm.28405","NM_011361","ENSMUSG00000019970","Sgk1","Sgk","serum/glucocorticoid regulated kinase 1","protein-coding"]
[4488,"chr2",35256496,35256678,"+",0,"NA","intron (NM_001206368, intron 1 of 16)","CpG",228,"NM_001206368",227753,"Mm.443","NM_146120","ENSMUSG00000026879","Gsn","ADF","gelsolin","protein-coding"]
[2850,"chr15",81855990,81861120,"+",0,"NA","promoter-TSS (NM_020507)","promoter-TSS (NM_020507)",-229,"NM_020507",57259,"Mm.323595","NM_020507","ENSMUSG00000048546","Tob2","2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663","transducer of ERBB2, 2","protein-coding"]
[1967,"chr12",110888583,110890470,"+",0,"NA","promoter-TSS (NM_026048)","promoter-TSS (NM_026048)",262,"NM_001081057",104859,"Mm.35583","NM_175336","ENSMUSG00000021275","Tecpr2","4930573I19Rik|AI604920|mKIAA0297","tectonin beta-propeller repeat containing 2","protein-coding"]
[5616,"chr4",95049802,95054133,"+",0,"NA","5' UTR (NM_010591, exon 1 of 1)","5' UTR (NM_010591, exon 1 of 1)",255,"NM_010591",16476,"Mm.275071","NM_010591","ENSMUSG00000052684","Jun","AP-1|Junc|c-jun","jun proto-oncogene","protein-coding"]
[1483,"chr11",100207815,100210786,"+",0,"NA","Intergenic","Intergenic",-1790,"NM_001313956",16664,"Mm.439898","NM_016958","ENSMUSG00000045545","Krt14","AI626930|CK-14|K14|Krt-1.14|Krt1-14","keratin 14","protein-coding"]
[4695,"chr2",119662194,119662917,"+",0,"NA","intron (NM_027175, intron 1 of 4)","MIR|SINE|MIR",243,"NM_027175",69702,"Mm.5390","NM_027175","ENSMUSG00000027305","Ndufaf1","2410001M24Rik|CGI-65|CIA30","NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1","protein-coding"]
[5285,"chr3",103913654,103915618,"+",0,"NA","exon (NM_172684, exon 1 of 7)","exon (NM_172684, exon 1 of 7)",516,"NM_172684",229675,"Mm.29366","NM_172684","ENSMUSG00000044098","Rsbn1","C230004D03Rik|E330004N01|Rosbin|Rsbn|Rsbp|mKIAA3002","rosbin, round spermatid basic protein 1","protein-coding"]
[1114,"chr11",53298297,53302520,"+",0,"NA","promoter-TSS (NM_008300)","promoter-TSS (NM_008300)",71,"NM_008300",15525,"Mm.239865","NM_008300","ENSMUSG00000020361","Hspa4","70kDa|AI317151|APG-2|Hsp110|Hsp70RY|mKIAA4025","heat shock protein 4","protein-coding"]
[4497,"chr2",37358321,37359676,"+",0,"NA","intron (NM_026176, intron 1 of 3)","intron (NM_026176, intron 1 of 3)",334,"NM_026176",67466,"Mm.30709","NM_026176","ENSMUSG00000009030","Pdcl","1200011E13Rik|AW108059|PhLP1","phosducin-like","protein-coding"]
[5783,"chr4",126467437,126469028,"+",0,"NA","intron (NM_153403, intron 1 of 18)","intron (NM_153403, intron 1 of 18)",189,"NM_153403",236511,"Mm.30800","NM_153403","ENSMUSG00000041530","Ago1","Eif2c1","argonaute RISC catalytic subunit 1","protein-coding"]
[878,"chr10",119452884,119454549,"+",0,"NA","promoter-TSS (NM_133442)","promoter-TSS (NM_133442)",-318,"NM_133442",74053,"Mm.196692","NM_028736","ENSMUSG00000034813","Grip1","4931400F03Rik|GRIP|eb","glutamate receptor interacting protein 1","protein-coding"]
[3198,"chr16",57606411,57607493,"+",0,"NA","promoter-TSS (NM_025599)","promoter-TSS (NM_025599)",-85,"NM_025599",66497,"Mm.425976","NM_025599",null,"Cmss1","1110001A06Rik|2610528E23Rik|4930572F24Rik|AV099812|AV122629","cms small ribosomal subunit 1","protein-coding"]
[8464,"chr9",62121575,62123639,"+",0,"NA","promoter-TSS (NR_039595)","promoter-TSS (NR_039595)",-13,"NR_039595",100628602,null,"NR_039595","ENSMUSG00000092696","Mir5133","mir-5133|mmu-mir-5133|mu-mir-5133","microRNA 5133","ncRNA"]
[8031,"chr8",88137602,88138529,"+",0,"NA","promoter-TSS (NR_106039)","promoter-TSS (NR_106039)",-141,"NR_106039",102465649,null,"NR_106039","ENSMUSG00000099080","Mir7071","Gm27623|mmu-mir-7071","microRNA 7071","ncRNA"]
[4725,"chr2",122117760,122118322,"+",0,"NA","intron (NM_145531, intron 1 of 39)","intron (NM_145531, intron 1 of 39)",345,"NM_145531",214585,"Mm.222303","NM_145531","ENSMUSG00000033396","Spg11","6030465E24Rik|A330015I11|C530005A01Rik","spastic paraplegia 11","protein-coding"]
[6096,"chr5",28316513,28317748,"+",0,"NA","promoter-TSS (NM_028234)","promoter-TSS (NM_028234)",-59,"NM_028234",381626,"Mm.304075","NM_028234","ENSMUSG00000048271","Rbm33","3200001K10Rik|6430512A10Rik|AA386890|Prr8","RNA binding motif protein 33","protein-coding"]
[1632,"chr11",116434526,116435020,"+",0,"NA","intron (NR_003376, intron 3 of 3)","CpG-2855",560,"NR_003376",664849,"Mm.258466","NR_003376",null,"Gm7367","EG664849","1110014K08Rik pseudogene","pseudo"]
[1280,"chr11",75193049,75193657,"+",0,"NA","promoter-TSS (NM_177708)","promoter-TSS (NM_177708)",-640,"NM_177708",237847,"Mm.82661","NM_177708","ENSMUSG00000045287","Rtn4rl1","Ngr3|Ngrh2|Ngrl2","reticulon 4 receptor-like 1","protein-coding"]
[313,"chr1",134492559,134492966,"+",0,"NA","Intergenic","RSINE1|SINE|B4",-1898,"NM_145510",98710,"Mm.198119","NM_145510",null,"Rabif","AI842864|AW549708|E130318E12Rik|MSS4|RASGFR3","RAB interacting factor","protein-coding"]
[7136,"chr7",24237184,24237707,"+",0,"NA","5' UTR (NM_020262, exon 1 of 4)","5' UTR (NM_020262, exon 1 of 4)",153,"NM_020262",56869,"Mm.103751","NM_020262","ENSMUSG00000074283","Zfp109","-","zinc finger protein 109","protein-coding"]
[7035,"chr7",3616821,3618042,"+",0,"NA","promoter-TSS (NM_025348)","promoter-TSS (NM_025348)",58,"NM_025348",66091,"Mm.17851","NM_025348","ENSMUSG00000035674","Ndufa3","1010001M12Rik|1700022J01Rik","NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3","protein-coding"]
[3077,"chr16",20300259,20303002,"+",0,"NA","intron (NM_001005767, intron 1 of 9)","PB1D11|SINE|Alu",732,"NM_001005767",381038,"Mm.371737","NM_001005767","ENSMUSG00000033918","Parl","D16Ertd607e|PRO2207|PSARL1|PSENIP2|Psarl","presenilin associated, rhomboid-like","protein-coding"]
[3433,"chr17",28858552,28859096,"+",0,"NA","5' UTR (NM_001034885, exon 1 of 10)","5' UTR (NM_001034885, exon 1 of 10)",413,"NM_001034885",433091,"Mm.328925","NM_001034885","ENSMUSG00000043286","Pnpla1","-","patatin-like phospholipase domain containing 1","protein-coding"]
[4267,"chr19",46959929,46962242,"+",0,"NA","intron (NM_001164363, intron 1 of 17)","ID_B1|SINE|B4",1266,"NM_029810",76952,"Mm.40965","NM_029810","ENSMUSG00000025041","Nt5c2","2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II","5'-nucleotidase, cytosolic II","protein-coding"]
[8436,"chr9",57260847,57263019,"+",0,"NA","intron (NM_028820, intron 1 of 2)","CpG",666,"NM_028820",74211,"Mm.428905","NM_028820","ENSMUSG00000032300","1700017B05Rik","AA682102|D9Ertd278e","RIKEN cDNA 1700017B05 gene","protein-coding"]
[3715,"chr17",80127451,80127909,"+",0,"NA","5' UTR (NM_176963, exon 1 of 7)","5' UTR (NM_176963, exon 1 of 7)",209,"NM_176963",319625,"Mm.29098","NM_176963","ENSMUSG00000035473","Galm","A530057M15Rik|AU015645|AU020959","galactose mutarotase","protein-coding"]
[5055,"chr3",37722708,37725413,"+",0,"NA","intron (NM_198657, intron 1 of 2)","intron (NM_198657, intron 1 of 2)",300,"NM_198657",381438,"Mm.490549","NM_198657","ENSMUSG00000058174","Gm5148","EG381438","predicted gene 5148","protein-coding"]
[7654,"chr7",132154127,132154627,"+",0,"NA","exon (NM_018867, exon 1 of 14)","exon (NM_018867, exon 1 of 14)",364,"NM_018867",55987,"Mm.471654","NM_018867","ENSMUSG00000030862","Cpxm2","4632435C11Rik|CPX-2|Cpx2","carboxypeptidase X 2 (M14 family)","protein-coding"]
[516,"chr10",4431741,4433252,"+",0,"NA","promoter-TSS (NM_024261)","promoter-TSS (NM_024261)",-109,"NM_024261",73419,"Mm.346733","NM_024261","ENSMUSG00000061759","Armt1","1700052N19Rik|AW320013|AW536799","acidic residue methyltransferase 1","protein-coding"]
[2004,"chr13",3889924,3894454,"+",0,"NA","intron (NM_019671, intron 3 of 11)","intron (NM_019671, intron 3 of 11)",1392,"NM_001047159",56349,"Mm.22261","NM_019671","ENSMUSG00000021215","Net1","Net1a|mNET1","neuroepithelial cell transforming gene 1","protein-coding"]
[6128,"chr5",32610417,32611851,"+",0,"NA","promoter-TSS (NM_001205133)","promoter-TSS (NM_001205133)",-37,"NM_001205133",22612,"Mm.4558","NM_009535","ENSMUSG00000014932","Yes1","Yes|p61-Yes","Yamaguchi sarcoma viral (v-yes) oncogene homolog 1","protein-coding"]
[4679,"chr2",118673370,118679227,"+",0,"NA","promoter-TSS (NM_001145854)","promoter-TSS (NM_001145854)",-948,"NM_001145854",214230,"Mm.241857","NM_001033254","ENSMUSG00000074923","Pak6","4732456M09","p21 protein (Cdc42/Rac)-activated kinase 6","protein-coding"]
[3236,"chr16",90727108,90727887,"+",0,"NA","promoter-TSS (NM_025642)","promoter-TSS (NM_025642)",-126,"NM_025642",66578,"Mm.180363","NM_025642","ENSMUSG00000022978","Mis18a","2610039C10Rik|2810018N07Rik","MIS18 kinetochore protein homolog A (S. pombe)","protein-coding"]
[5395,"chr3",144819765,144822106,"+",0,"NA","Intergenic","Intergenic",-1441,"NM_030601",80797,"Mm.20897","NM_030601","ENSMUSG00000028262","Clca3a2","Clca2","chloride channel accessory 3A2","protein-coding"]
[7939,"chr8",71676206,71677068,"+",0,"NA","intron (NM_010589, intron 1 of 24)","CpG",254,"NM_010589",16453,"Mm.249645","NM_010589","ENSMUSG00000031805","Jak3","fae|wil","Janus kinase 3","protein-coding"]
[1889,"chr12",83987202,83988558,"+",0,"NA","promoter-TSS (NM_134188)","promoter-TSS (NM_134188)",19,"NM_134188",171210,"Mm.371675","NM_134188","ENSMUSG00000021226","Acot2","AA571646|MTE-I|Mte1","acyl-CoA thioesterase 2","protein-coding"]
[2646,"chr15",8168662,8169514,"+",0,"NA","promoter-TSS (NM_001162906)","promoter-TSS (NM_001162906)",-18,"NM_001162906",73692,"Mm.164436","NM_001162906","ENSMUSG00000039801","2410089E03Rik","4732468D17Rik|Hug|Jbts17|b2b012Clo","RIKEN cDNA 2410089E03 gene","protein-coding"]
[10,"chr1",9747557,9748865,"+",0,"NA","non-coding (NR_040462, exon 1 of 4)","non-coding (NR_040462, exon 1 of 4)",171,"NM_173443",70675,"Mm.274493","NM_173443","ENSMUSG00000045210","Vcpip1","4932442A08|5730421J18Rik|5730538E15Rik|VCIP135|mKIAA1850","valosin containing protein (p97)/p47 complex interacting protein 1","protein-coding"]
[5574,"chr4",59782839,59784567,"+",0,"NA","intron (NM_001013577, intron 1 of 4)","CpG",152,"NM_001013577",66209,"Mm.51988","NM_001013577","ENSMUSG00000038544","Inip","1110054O05Rik|2610312O17Rik|AA399876|Ssbip1","INTS3 and NABP interacting protein","protein-coding"]
[5445,"chr4",11558272,11558812,"+",0,"NA","promoter-TSS (NM_001256145)","promoter-TSS (NM_001256145)",-378,"NM_001039556",623474,"Mm.491200","NM_177285","ENSMUSG00000078773","Rad54b","E130016E03Rik","RAD54 homolog B (S. cerevisiae)","protein-coding"]
[4903,"chr2",160364772,160367904,"+",0,"NA","exon (NM_010658, exon 1 of 1)","exon (NM_010658, exon 1 of 1)",727,"NM_010658",16658,"Mm.330745","NM_010658","ENSMUSG00000074622","Mafb","Kreisler|Krml|Krml1|kr","v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)","protein-coding"]
[4118,"chr19",10524624,10526148,"+",0,"NA","promoter-TSS (NM_025333)","promoter-TSS (NM_025333)",142,"NM_172302",269061,"Mm.490260","NM_172302","ENSMUSG00000034820","Cpsf7","5730453I16Rik|AL022757|C330017N18Rik","cleavage and polyadenylation specific factor 7","protein-coding"]
[3130,"chr16",32430301,32431541,"+",0,"NA","promoter-TSS (NM_001163160)","promoter-TSS (NM_001163160)",0,"NM_009981",13026,"Mm.98775","NM_009981","ENSMUSG00000005615","Pcyt1a","CTalpha|Cctalpha|Ctpct|Cttalpha","phosphate cytidylyltransferase 1, choline, alpha isoform","protein-coding"]
[5486,"chr4",34882079,34883211,"+",0,"NA","intron (NM_013889, intron 1 of 7)","CpG",303,"NM_013889",30046,"Mm.38193","NM_013889","ENSMUSG00000039967","Zfp292","5730450D02Rik|5830493J20Rik|9430062L07Rik|AI449016|Krox-10|Zfp-15|Zfp15|Zn-15|Zn-16|mKIAA0530","zinc finger protein 292","protein-coding"]
[6822,"chr6",83830995,83832399,"+",0,"NA","promoter-TSS (NM_146169)","promoter-TSS (NM_146169)",44,"NM_146169",232164,"Mm.404420","NM_146169","ENSMUSG00000045896","Paip2b","-","poly(A) binding protein interacting protein 2B","protein-coding"]
[3388,"chr17",25861040,25862719,"+",0,"NA","promoter-TSS (NM_001163766)","promoter-TSS (NM_001163766)",-364,"NM_001163766",106618,"Mm.35470","NM_134124","ENSMUSG00000073434","Wdr90","3230401M21Rik|AI551153|mKIAA1924","WD repeat domain 90","protein-coding"]
[4546,"chr2",69885202,69885975,"+",0,"NA","promoter-TSS (NR_110977)","promoter-TSS (NR_110977)",27,"NM_029280",75422,"Mm.10508","NM_029280","ENSMUSG00000051730","Mettl5","2810410A08Rik","methyltransferase like 5","protein-coding"]
[2247,"chr13",85189518,85189909,"+",0,"NA","intron (NM_023243, intron 1 of 8)","intron (NM_023243, intron 1 of 8)",236,"NM_023243",66671,"Mm.18474","NM_023243","ENSMUSG00000021548","Ccnh","6330408H09Rik|AI661354|AV102684|AW538719","cyclin H","protein-coding"]
[5739,"chr4",119320255,119320983,"+",0,"NA","promoter-TSS (NM_001110129)","promoter-TSS (NM_001110129)",-96,"NM_001110130",66101,"Mm.304080","NM_028677","ENSMUSG00000060288","Ppih","1100001J08Rik|2010111B15Rik|4833408F11Rik|AI464484|CYP-20|CYPH|D4Wsu43e","peptidyl prolyl isomerase H","protein-coding"]
[4958,"chr2",170511191,170511898,"+",0,"NA","non-coding (NR_040367, exon 1 of 3)","non-coding (NR_040367, exon 1 of 3)",314,"NM_001199902",109054,"Mm.28808","NM_001013369","ENSMUSG00000052033","Pfdn4","0610025M10Rik|1810063B06Rik|C-1|C1|Pfd4","prefoldin 4","protein-coding"]
[5319,"chr3",108839362,108840940,"+",0,"NA","intron (NM_011504, intron 1 of 18)","CpG",351,"NM_011504",20912,"Mm.316894","NM_011504","ENSMUSG00000027882","Stxbp3","Munc-18c|Stxbp3a|Sxtbp3|Unc18-3","syntaxin binding protein 3","protein-coding"]
[5543,"chr4",48042392,48046913,"+",0,"NA","promoter-TSS (NM_015743)","promoter-TSS (NM_015743)",-653,"NM_015743",18124,"Mm.247261","NM_015743","ENSMUSG00000028341","Nr4a3","AI573420|CHN|CSMF|MINOR|NOR-1|Nor1|TEC","nuclear receptor subfamily 4, group A, member 3","protein-coding"]
[4917,"chr2",163994607,163995983,"+",0,"NA","promoter-TSS (NM_018753)","promoter-TSS (NM_018753)",98,"NM_018753",54401,"Mm.34319","NM_018753","ENSMUSG00000018326","Ywhab","1300003C17Rik","tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide","protein-coding"]
[5284,"chr3",103831638,103833052,"+",0,"NA","promoter-TSS (NM_001142960)","promoter-TSS (NM_001142960)",-351,"NM_001142959",229672,"Mm.297245","NM_001142959","ENSMUSG00000044165","Bcl2l15","Bfk|Gm566","BCLl2-like 15","protein-coding"]
[4338,"chr2",14073181,14075412,"+",0,"NA","promoter-TSS (NR_038162)","promoter-TSS (NR_038162)",184,"NM_011484",20844,"Mm.273174","NM_011484","ENSMUSG00000026718","Stam","STAM1","signal transducing adaptor molecule (SH3 domain and ITAM motif) 1","protein-coding"]
[3830,"chr18",34930399,34933808,"+",0,"NA","promoter-TSS (NM_144866)","promoter-TSS (NM_144866)",-100,"NM_144866",225363,"Mm.329353","NM_144866","ENSMUSG00000024360","Etf1","AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1","eukaryotic translation termination factor 1","protein-coding"]
[6131,"chr5",32862561,32864158,"+",0,"NA","promoter-TSS (NM_001170567)","promoter-TSS (NM_001170567)",-362,"NM_177786",277854,"Mm.101524","NM_177786","ENSMUSG00000037426","Depdc5","AV016528","DEP domain containing 5","protein-coding"]
[8592,"chr9",99575576,99576435,"+",0,"NA","exon (NM_031403, exon 1 of 8)","exon (NM_031403, exon 1 of 8)",206,"NM_031403",83703,"Mm.31324","NM_031403","ENSMUSG00000032469","Dbr1","AW018415","debranching enzyme homolog 1 (S. cerevisiae)","protein-coding"]
[5386,"chr3",139205230,139206149,"+",0,"NA","promoter-TSS (NM_198659)","promoter-TSS (NM_198659)",-204,"NM_198659",381476,"Mm.188334","NM_198659","ENSMUSG00000047940","Stpg2","B930007M17Rik|Gm1017","sperm tail PG rich repeat containing 2","protein-coding"]
[8541,"chr9",78175662,78177038,"+",0,"NA","intron (NR_040401, intron 1 of 3)","intron (NR_040401, intron 1 of 3)",436,"NR_040401",320295,"Mm.131285","NR_040401","ENSMUSG00000097574","C920006O11Rik","-","RIKEN cDNA C920006O11 gene","ncRNA"]
[8954,"chrX",152342066,152342954,"+",0,"NA","promoter-TSS (NM_029836)","promoter-TSS (NM_029836)",-26,"NM_029836",52808,"Mm.9997","NM_029836","ENSMUSG00000041096","Tspyl2","CDA1|CINAP|DENTT|DXBwg1396e|DXHXS1008E|E130307F10Rik","TSPY-like 2","protein-coding"]
[5269,"chr3",100921660,100922812,"+",0,"NA","promoter-TSS (NM_194343)","promoter-TSS (NM_194343)",-257,"NM_001165952",229644,"Mm.189351","NM_194343","ENSMUSG00000033233","Trim45","4921530N01Rik","tripartite motif-containing 45","protein-coding"]
[6483,"chr5",134932366,134933494,"+",0,"NA","intron (NM_024479, intron 2 of 5)","intron (NM_024479, intron 2 of 5)",557,"NM_024479",79565,"Mm.34235","NM_024479","ENSMUSG00000040557","Wbscr27","AW492986|BC002286","Williams Beuren syndrome chromosome region 27 (human)","protein-coding"]
[1573,"chr11",107026929,107028495,"+",0,"NA","promoter-TSS (NM_001163473)","promoter-TSS (NM_001163473)",-511,"NM_001163473",69066,"Mm.40679","NM_001163473",null,"1810010H24Rik","OTTMUSG00000003581","RIKEN cDNA 1810010H24 gene","protein-coding"]
[5484,"chr4",34686937,34687764,"+",0,"NA","promoter-TSS (NM_011895)","promoter-TSS (NM_011895)",88,"NM_011895",24060,"Mm.281885","NM_011895","ENSMUSG00000028293","Slc35a1","AA408150|AI314851","solute carrier family 35 (CMP-sialic acid transporter), member 1","protein-coding"]
[3770,"chr18",12127850,12129690,"+",0,"NA","promoter-TSS (NM_024182)","promoter-TSS (NM_024182)",-80,"NM_024182",66878,"Mm.28551","NM_024182","ENSMUSG00000024404","Riok3","1200013N13Rik|D18Ertd331e|E130306C24Rik|Sudd","RIO kinase 3","protein-coding"]
[3725,"chr17",84184993,84191541,"+",0,"NA","promoter-TSS (NM_001001806)","promoter-TSS (NM_001001806)",-320,"NM_001001806",12193,"Mm.259321","NM_001001806","ENSMUSG00000045817","Zfp36l2","Brf2|ERF2|Tis11d","zinc finger protein 36, C3H type-like 2","protein-coding"]
[933,"chr10",128492882,128495088,"+",0,"NA","promoter-TSS (NM_010860)","promoter-TSS (NM_010860)",-160,"NM_010860",17904,"Mm.337074","NM_010860","ENSMUSG00000090841","Myl6","ESMLC|LC17|LC17-GI|LC17-NM|LC17A|LC17B|MLC-3|MLC1SM|MLC3SM|MLC3nm|Myln","myosin, light polypeptide 6, alkali, smooth muscle and non-muscle","protein-coding"]
[2333,"chr14",7997131,8004735,"+",0,"NA","Intergenic","Intergenic",-1969,"NM_025341",66082,"Mm.181473","NM_025341","ENSMUSG00000025277","Abhd6","0610041D24Rik|AA673485|AV065425","abhydrolase domain containing 6","protein-coding"]
[2052,"chr13",24279582,24281594,"+",0,"NA","exon (NM_026825, exon 1 of 38)","exon (NM_026825, exon 1 of 38)",202,"NM_001311122",68732,"Mm.211047","NM_026825","ENSMUSG00000021338","Lrrc16a","1110037D04Rik|AI425970|CARMIL|D130057M20|Lrrc16","leucine rich repeat containing 16A","protein-coding"]
[4785,"chr2",132576767,132579029,"+",0,"NA","intron (NM_001291051, intron 1 of 18)","CpG",350,"NM_001291050",74182,"Mm.211211","NM_027096","ENSMUSG00000027346","Gpcpd1","2310004G06Rik|2310032D16Rik|AU015213|Gde5|Prei4|mKIAA1434","glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)","protein-coding"]
[2503,"chr14",56667757,56668667,"+",0,"NA","promoter-TSS (NM_023773)","promoter-TSS (NM_023773)",-36,"NM_023773",75339,"Mm.152466","NM_023773","ENSMUSG00000079184","Mphosph8","1500035L22Rik|4930548G07Rik|AU040635","M-phase phosphoprotein 8","protein-coding"]
[4100,"chr19",8797915,8798954,"+",0,"NA","intron (NM_026329, intron 1 of 7)","intron (NM_026329, intron 1 of 7)",123,"NM_026329",67710,"Mm.22117","NM_026329","ENSMUSG00000071662","Polr2g","2410046K11Rik|A230108L04Rik|C76415|RBP7|Rpo2-7l","polymerase (RNA) II (DNA directed) polypeptide G","protein-coding"]
[388,"chr1",164273839,164276566,"+",0,"NA","promoter-TSS (NM_029115)","promoter-TSS (NM_029115)",-396,"NM_029115",74895,"Mm.167258","NM_029115","ENSMUSG00000026578","Ccdc181","4930455F23Rik|AI427889","coiled-coil domain containing 181","protein-coding"]
[5350,"chr3",126595698,126598625,"+",0,"NA","5' UTR (NM_001025438, exon 1 of 19)","5' UTR (NM_001025438, exon 1 of 19)",210,"NM_023813",108058,"Mm.255822","NM_023813","ENSMUSG00000053819","Camk2d","2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII","calcium/calmodulin-dependent protein kinase II, delta","protein-coding"]
[5053,"chr3",37312125,37313933,"+",0,"NA","promoter-TSS (NM_145825)","promoter-TSS (NM_145825)",475,"NM_001255992",241950,"Mm.32171","NM_001008502","ENSMUSG00000051444","Bbs12","Gm1805|Gm407|Gm721","Bardet-Biedl syndrome 12 (human)","protein-coding"]
[5888,"chr4",135494093,135495572,"+",0,"NA","promoter-TSS (NM_028995)","promoter-TSS (NM_028995)",-328,"NM_028995",74552,"Mm.26548","NM_028995","ENSMUSG00000028803","Nipal3","9130020G22Rik|AI480660|Npal3","NIPA-like domain containing 3","protein-coding"]
[4190,"chr19",34474958,34475392,"+",0,"NA","promoter-TSS (NM_009890)","promoter-TSS (NM_009890)",-40,"NM_009890",12642,"Mm.30824","NM_009890","ENSMUSG00000050370","Ch25h","AI462618|m25OH","cholesterol 25-hydroxylase","protein-coding"]
[6197,"chr5",63969485,63969978,"+",0,"NA","promoter-TSS (NM_145923)","promoter-TSS (NM_145923)",-834,"NM_145923",100532,"Mm.243632","NM_145923","ENSMUSG00000047881","Rell1","AA536743","RELT-like 1","protein-coding"]
[6530,"chr5",138186707,138188134,"+",0,"NA","promoter-TSS (NM_009315)","promoter-TSS (NM_009315)",-115,"NM_178612",66455,"Mm.24592","NM_178612","ENSMUSG00000036968","Cnpy4","2610019P18Rik","canopy 4 homolog (zebrafish)","protein-coding"]
[485,"chr1",186748886,186749778,"+",0,"NA","promoter-TSS (NM_026041)","promoter-TSS (NM_026041)",26,"NM_026041",67223,"Mm.289841","NM_026041","ENSMUSG00000001305","Rrp15","2810430M08Rik|5430437H21Rik","ribosomal RNA processing 15 homolog (S. cerevisiae)","protein-coding"]
[3316,"chr17",17856543,17857383,"+",0,"NA","Intergenic","Intergenic",-1775,"NM_008215",15116,"Mm.255701","NM_008215","ENSMUSG00000003665","Has1","HAS","hyaluronan synthase1","protein-coding"]
[8886,"chrX",94121377,94123700,"+",0,"NA","intron (NM_001044386, intron 1 of 8)","CpG",869,"NM_011768",22764,"Mm.919","NM_011768","ENSMUSG00000079509","Zfx","Zfx5|Zfx5,6|Zfx6","zinc finger protein X-linked","protein-coding"]
[1270,"chr11",73265437,73268677,"+",0,"NA","promoter-TSS (NM_145099)","promoter-TSS (NM_145099)",-563,"NM_145099",246788,"Mm.75196","NM_145099","ENSMUSG00000043029","Trpv3","1110036I10Rik|AI644701|Nh|VRL3","transient receptor potential cation channel, subfamily V, member 3","protein-coding"]
[1645,"chr11",117333457,117334785,"+",0,"NA","intron (NM_001113488, intron 1 of 9)","intron (NM_001113488, intron 1 of 9)",1808,"NM_001113488",53860,"Mm.38450","NM_017380","ENSMUSG00000059248","2009-09-01","MSF1|Msf|PNUTL4|Sint1","septin 9","protein-coding"]
[3508,"chr17",34849119,34851010,"+",0,"NA","promoter-TSS (NM_138580)","promoter-TSS (NM_138580)",140,"NM_021337",108077,"Mm.18845","NM_021337","ENSMUSG00000040356","Skiv2l","4930534J06Rik|AW214248|Ddx13|SKI|Ski2w","superkiller viralicidic activity 2-like (S. cerevisiae)","protein-coding"]
[324,"chr1",136344735,136346611,"+",0,"NA","5' UTR (NM_001081360, exon 1 of 19)","5' UTR (NM_001081360, exon 1 of 19)",431,"NM_001081360",67886,"Mm.144143","NM_001081360","ENSMUSG00000041570","Camsap2","1600013L13Rik|4930541M15Rik|Camsap1l1|mKIAA1078","calmodulin regulated spectrin-associated protein family, member 2","protein-coding"]
[1389,"chr11",87853262,87853496,"+",0,"NA","intron (NM_001039684, intron 1 of 17)","intron (NM_001039684, intron 1 of 17)",154,"NM_001039684",380718,"Mm.24404","NM_001039684","ENSMUSG00000034121","Mks1","AK190930|B8d3","Meckel syndrome, type 1","protein-coding"]
[7564,"chr7",120917808,120918548,"+",0,"NA","intron (NM_001164096, intron 1 of 19)","CpG",434,"NM_001164096",26939,"Mm.193632","NM_025298","ENSMUSG00000030880","Polr3e","RPC5|Sin","polymerase (RNA) III (DNA directed) polypeptide E","protein-coding"]
[5987,"chr4",150281022,150282564,"+",0,"NA","promoter-TSS (NM_001085492)","promoter-TSS (NM_001085492)",-123,"NM_001085492",68703,"Mm.291274","NM_001085492","ENSMUSG00000039852","Rere","1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye<m03Jus>|eyes3|mKIAA0458","arginine glutamic acid dipeptide (RE) repeats","protein-coding"]
[637,"chr10",57531561,57532594,"+",0,"NA","intron (NM_019760, intron 1 of 8)","CpG",452,"NM_019760",56442,"Mm.29344","NM_019760","ENSMUSG00000019877","Serinc1","1500011D18Rik|AI315070|AIGP-2|TMS-2|Tde1l|Tde2|Tms2|mKIAA1253","serine incorporator 1","protein-coding"]
[5566,"chr4",58911077,58913232,"+",0,"NA","intron (NM_172381, intron 1 of 48)","CpG",571,"NM_172381",230249,"Mm.234801","NM_172381","ENSMUSG00000050812","AI314180","AW558785|BB181316|mKIAA0368","expressed sequence AI314180","protein-coding"]
[2066,"chr13",31806067,31808630,"+",0,"NA","exon (NM_008592, exon 1 of 1)","exon (NM_008592, exon 1 of 1)",702,"NM_008592",17300,"Mm.12949","NM_008592","ENSMUSG00000050295","Foxc1","FREAC3|Fkh1|Mf1|Mf4|ch|fkh-1|frkhda","forkhead box C1","protein-coding"]
[8027,"chr8",86623670,86624655,"+",0,"NA","5' UTR (NM_025827, exon 1 of 15)","5' UTR (NM_025827, exon 1 of 15)",119,"NM_025827",66887,"Mm.324550","NM_025827","ENSMUSG00000047866","Lonp2","1300002A08Rik|AU015403|Lonp","lon peptidase 2, peroxisomal","protein-coding"]
[2679,"chr15",34237764,34239761,"+",0,"NA","intron (NM_033521, intron 1 of 6)","CpG",736,"NM_033521",114128,"Mm.197518","NM_033521","ENSMUSG00000022257","Laptm4b","C330023P13Rik|LAPTM4beta","lysosomal-associated protein transmembrane 4B","protein-coding"]
[1232,"chr11",69913327,69914943,"+",0,"NA","promoter-TSS (NM_019726)","promoter-TSS (NM_019726)",-57,"NM_019726",56310,"Mm.477738","NM_019726","ENSMUSG00000023170","Gps2","AI505953","G protein pathway suppressor 2","protein-coding"]
[6554,"chr5",139814009,139814555,"+",0,"NA","promoter-TSS (NM_001161548)","promoter-TSS (NM_001161548)",1,"NM_001161548",231832,"Mm.482655","NM_144914","ENSMUSG00000036687","Tmem184a","Sdmg1","transmembrane protein 184a","protein-coding"]
[2941,"chr15",99702067,99703178,"+",0,"NA","intron (NM_031842, intron 1 of 12)","intron (NM_031842, intron 1 of 12)",335,"NM_031842",83797,"Mm.273756","NM_031842","ENSMUSG00000023018","Smarcd1","AA407987|Baf60a|D15Kz1","SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1","protein-coding"]
[5978,"chr4",149425601,149426585,"+",0,"NA","5' UTR (NM_022022, exon 1 of 27)","5' UTR (NM_022022, exon 1 of 27)",538,"NM_022022",63958,"Mm.415260","NM_022022","ENSMUSG00000028960","Ube4b","4930551I19Rik|4933406G05Rik|AU014668|D4Bwg0973e|UFD2|UFD2a|Ufd2p|mKIAA0684","ubiquitination factor E4B","protein-coding"]
[7668,"chr7",138845761,138847265,"+",0,"NA","promoter-TSS (NM_001045483)","promoter-TSS (NM_001045483)",127,"NM_026391",52432,"Mm.258739","NM_026391","ENSMUSG00000041769","Ppp2r2d","1300017E19Rik|D7Ertd753e|MDS026","protein phosphatase 2, regulatory subunit B, delta","protein-coding"]
[1639,"chr11",116842528,116844526,"+",0,"NA","promoter-TSS (NM_028865)","promoter-TSS (NM_028865)",12,"NM_028865",74319,"Mm.429312","NM_028865","ENSMUSG00000090266","Mettl23","1110005A03Rik|1500035B17Rik|4933424L15Rik","methyltransferase like 23","protein-coding"]
[3872,"chr18",46280136,46281235,"+",0,"NA","exon (NM_172627, exon 1 of 9)","exon (NM_172627, exon 1 of 9)",165,"NM_172627",225467,"Mm.262096","NM_172627","ENSMUSG00000024477","Pggt1b","2010207C17Rik|2610100E13|AI451237|AI551093|BGG1|GGT1","protein geranylgeranyltransferase type I, beta subunit","protein-coding"]
[1035,"chr11",26592663,26594047,"+",0,"NA","intron (NM_001252447, intron 1 of 11)","intron (NM_001252447, intron 1 of 11)",565,"NM_027260",69922,"Mm.285351","NM_027260","ENSMUSG00000064090","Vrk2","2810003O05Rik|AI447698","vaccinia related kinase 2","protein-coding"]
[5197,"chr3",90508209,90510078,"+",0,"NA","intron (NM_001293776, intron 1 of 5)","C-rich|Low_complexity|Low_complexity",355,"NM_001293776",66511,"Mm.154136","NM_023215","ENSMUSG00000001017","Chtop","2500003M10Rik|Fop|Srag","chromatin target of PRMT1","protein-coding"]
[3367,"chr17",24803899,24804650,"+",0,"NA","promoter-TSS (NM_029197)","promoter-TSS (NM_029197)",-108,"NM_029197",75178,"Mm.52592","NM_029197","ENSMUSG00000024155","Meiob","4930528F23Rik|MLZ-675","meiosis specific with OB domains","protein-coding"]
[3964,"chr18",80254075,80257366,"+",0,"NA","promoter-TSS (NM_001164424)","promoter-TSS (NM_001164424)",475,"NM_001164420",66943,"Mm.29247","NM_025861","ENSMUSG00000034006","Pqlc1","2310009N05Rik|4933425L21Rik|5730564E11Rik|C78974","PQ loop repeat containing 1","protein-coding"]
[6537,"chr5",138622558,138623350,"+",0,"NA","promoter-TSS (NM_183025)","promoter-TSS (NM_183025)",95,"NM_183025",243308,"Mm.36612","NM_183025","ENSMUSG00000056014","A430033K04Rik","C86988","RIKEN cDNA A430033K04 gene","protein-coding"]
[6901,"chr6",113604274,113605510,"+",0,"NA","exon (NM_133937, exon 1 of 3)","exon (NM_133937, exon 1 of 3)",120,"NM_133937",101314,"Mm.485793","NM_133937","ENSMUSG00000033940","Brk1","6720456B07Rik|AW011779","BRICK1, SCAR/WAVE actin-nucleating complex subunit","protein-coding"]
[4378,"chr2",25284803,25287767,"+",0,"NA","TTS (NM_175300)","TTS (NM_175300)",-1860,"NM_030055",78217,"Mm.160057","NM_030055","ENSMUSG00000026963","Tmem210","4930571C24Rik","transmembrane protein 210","protein-coding"]
[5529,"chr4",45107186,45107934,"+",0,"NA","intron (NM_001134646, intron 1 of 2)","intron (NM_001134646, intron 1 of 2)",553,"NM_001134646",68512,"Mm.282081","NM_001099675","ENSMUSG00000078713","Tomm5","1110019J04Rik|Tom5","translocase of outer mitochondrial membrane 5 homolog (yeast)","protein-coding"]
[2995,"chr16",4875972,4884529,"+",0,"NA","promoter-TSS (NM_145359)","promoter-TSS (NM_145359)",-399,"NM_145359",207740,"Mm.268895","NM_145359",null,"Ubald1","1500031H01Rik|BC013706|Fam100a","UBA-like domain containing 1","protein-coding"]
[5729,"chr4",118526784,118527519,"+",0,"NA","promoter-TSS (NM_025572)","promoter-TSS (NM_025572)",-124,"NM_025572",66451,"Mm.34431","NM_025572","ENSMUSG00000028536","2610528J11Rik","TEMP","RIKEN cDNA 2610528J11 gene","protein-coding"]
[7928,"chr8",71271750,71273743,"+",0,"NA","promoter-TSS (NM_015742)","promoter-TSS (NM_015742)",32,"NM_001142323",17925,"Mm.33779","NM_015742","ENSMUSG00000004677","Myo9b","-","myosin IXb","protein-coding"]
[1712,"chr12",4132829,4134105,"+",0,"NA","promoter-TSS (NM_001159537)","promoter-TSS (NM_001159537)",70,"NM_001159537",104111,"Mm.489807","NM_138305","ENSMUSG00000020654","Adcy3","AC3|mKIAA0511","adenylate cyclase 3","protein-coding"]
[8821,"chrX",42148691,42153524,"+",0,"NA","intron (NM_021465, intron 1 of 32)","intron (NM_021465, intron 1 of 32)",406,"NM_021465",20843,"Mm.290422","NM_021465","ENSMUSG00000025862","Stag2","9230105L23Rik|B230112I07Rik|SA-2|SAP2","stromal antigen 2","protein-coding"]
[8243,"chr9",7870817,7874506,"+",0,"NA","intron (NM_007464, intron 1 of 8)","CpG",509,"NM_007464",11796,"Mm.2026","NM_007464","ENSMUSG00000032000","Birc3","AW107670|Api1|Api2|Birc2|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF49|cIAP-1|cIAP-2|cIAP1|cIAP2","baculoviral IAP repeat-containing 3","protein-coding"]
[2344,"chr14",14345936,14346435,"+",0,"NA","promoter-TSS (NM_008369)","promoter-TSS (NM_008369)",-310,"NM_008369",16188,"Mm.425857","NM_008369","ENSMUSG00000068758","Il3ra","CD123|CDw123|SUT-1","interleukin 3 receptor, alpha chain","protein-coding"]
[5624,"chr4",98922080,98923067,"+",0,"NA","Intergenic","Intergenic",-1237,"NM_001301414",230484,"Mm.371692","NM_146144","ENSMUSG00000028560","Usp1","-","ubiquitin specific peptidase 1","protein-coding"]
[2552,"chr14",69732037,69734441,"+",0,"NA","promoter-TSS (NM_134078)","promoter-TSS (NM_134078)",405,"NR_130157",75016,"Mm.394574","NR_130157","ENSMUSG00000097284","4930480K23Rik","-","RIKEN cDNA 4930480K23 gene","ncRNA"]
[5007,"chr3",7502225,7504050,"+",0,"NA","promoter-TSS (NM_173181)","promoter-TSS (NM_173181)",-289,"NM_173181",67306,"Mm.332366","NM_173181","ENSMUSG00000043542","Zc2hc1a","3110050N22Rik|AI790358|AU023959|Fam164a","zinc finger, C2HC-type containing 1A","protein-coding"]
[6933,"chr6",120463225,120464008,"+",0,"NA","intron (NM_008359, intron 1 of 12)","CpG",419,"NM_008359",16172,"Mm.4481","NM_008359",null,"Il17ra","AW538159|Cdw217|Il17r|VDw217","interleukin 17 receptor A","protein-coding"]
[7751,"chr8",11476434,11478622,"+",0,"NA","promoter-TSS (NR_126558)","promoter-TSS (NR_126558)",-401,"NR_126558",102132,"Mm.37632","NR_126558","ENSMUSG00000096957","E230013L22Rik","AI645545","RIKEN cDNA E230013L22 gene","ncRNA"]
[4452,"chr2",31670805,31671231,"+",0,"NA","intron (NM_144886, intron 1 of 8)","CpG",281,"NM_144886",227715,"Mm.150972","NM_144886","ENSMUSG00000039356","Exosc2","Rrp4","exosome component 2","protein-coding"]
[5456,"chr4",16159757,16163485,"+",0,"NA","intron (NM_138952, intron 1 of 10)","intron (NM_138952, intron 1 of 10)",1877,"NM_138952",192656,"Mm.112765","NM_138952","ENSMUSG00000041135","Ripk2","2210420D18Rik|CARD3|CARDIAK|CCK|D4Bwg0615e|RICK|RIP2","receptor (TNFRSF)-interacting serine-threonine kinase 2","protein-coding"]
[5585,"chr4",63495442,63496425,"+",0,"NA","promoter-TSS (NM_028640)","promoter-TSS (NM_028640)",58,"NM_001008793",73750,"Mm.300397","NM_028640","ENSMUSG00000039137","Whrn","1110035G07Rik|AW122018|AW742671|C430046P22Rik|Dfnb31|wi","whirlin","protein-coding"]
[3749,"chr18",4375649,4376968,"+",0,"NA","intron (NM_026157, intron 1 of 8)","MTD|LTR|ERVL-MaLR",716,"NM_026157",67440,"Mm.49826","NM_026157","ENSMUSG00000024234","Mtpap","0610027A18Rik|AW551379|Papd1","mitochondrial poly(A) polymerase","protein-coding"]
[6029,"chr4",155840739,155841172,"+",0,"NA","exon (NM_024263, exon 3 of 10)","exon (NM_024263, exon 3 of 10)",1275,"NM_024263",74761,"Mm.159028","NM_024263","ENSMUSG00000029070","Mxra8","1200013A08Rik|1700095D18Rik|AI131686|Asp3|Dicam","matrix-remodelling associated 8","protein-coding"]
[3115,"chr16",30586822,30588941,"+",0,"NA","promoter-TSS (NM_178069)","promoter-TSS (NM_178069)",-292,"NM_178069",224092,"Mm.567","NM_178069",null,"Lsg1","5830465I20|AA409273|D16Bwg1547e","large subunit GTPase 1 homolog (S. cerevisiae)","protein-coding"]
[380,"chr1",162547519,162549197,"+",0,"NA","promoter-TSS (NM_144877)","promoter-TSS (NM_144877)",-13,"NM_144877",71449,"Mm.270569","NM_144877",null,"Mettl13","5630401D24Rik","methyltransferase like 13","protein-coding"]
[3206,"chr16",62845490,62848086,"+",0,"NA","5' UTR (NM_026577, exon 1 of 10)","5' UTR (NM_026577, exon 1 of 10)",252,"NM_026577",68146,"Mm.96833","NM_026577","ENSMUSG00000022911","Arl13b","A530097K21Rik|A930014M17Rik|Arl2l1|C530009C10Rik|hnn","ADP-ribosylation factor-like 13B","protein-coding"]
[965,"chr11",4872749,4873404,"+",0,"NA","promoter-TSS (NM_008698)","promoter-TSS (NM_008698)",-927,"NM_008698",18082,"Mm.293716","NM_008698","ENSMUSG00000034285","Nipsnap1","-","4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)","protein-coding"]
[1279,"chr11",75189774,75190452,"+",0,"NA","intron (NM_144491, intron 1 of 12)","intron (NM_144491, intron 1 of 12)",370,"NM_144491",116905,"Mm.41496","NM_144491","ENSMUSG00000078789","Dph1","2310011M22Rik|4930488F09Rik|AW551873|Dph2l1|Ovca1","DPH1 homolog (S. cerevisiae)","protein-coding"]
[286,"chr1",128243632,128245444,"+",0,"NA","exon (NM_026390, exon 1 of 13)","exon (NM_026390, exon 1 of 13)",357,"NM_026390",67812,"Mm.293321","NM_026390","ENSMUSG00000026353","Ubxn4","1300013G12Rik|Ubxd2|mKIAA0242","UBX domain protein 4","protein-coding"]
[1395,"chr11",88716264,88719485,"+",0,"NA","promoter-TSS (NR_038058)","promoter-TSS (NR_038058)",355,"NM_054043",76626,"Mm.400451","NM_054043","ENSMUSG00000069769","Msi2","1700105C15Rik|AI451722|AI563628|AW489193|Msi2h","musashi RNA-binding protein 2","protein-coding"]
[1075,"chr11",48799449,48801380,"+",0,"NA","promoter-TSS (NM_008143)","promoter-TSS (NM_008143)",54,"NM_008143",14694,"Mm.5305","NM_008143","ENSMUSG00000020372","Gnb2l1","AL033335|GB-like|Gnb2-rs1|Rack1|p205","guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1","protein-coding"]
[2426,"chr14",45387917,45389435,"+",0,"NA","intron (NM_019425, intron 1 of 5)","CpG",120,"NM_019425",54342,"Mm.312945","NM_019425","ENSMUSG00000037722","Gnpnat1","AU017428|AU040593|EMeg32|Gpnat1|Gsnpat","glucosamine-phosphate N-acetyltransferase 1","protein-coding"]
[3125,"chr16",32099262,32100201,"+",0,"NA","promoter-TSS (NM_001111025)","promoter-TSS (NM_001111025)",-4,"NM_024464",72084,"Mm.37613","NM_024464","ENSMUSG00000023791","Pigx","2010319C14Rik|PIG-X","phosphatidylinositol glycan anchor biosynthesis, class X","protein-coding"]
[4469,"chr2",32711471,32715116,"+",0,"NA","promoter-TSS (NR_037217)","promoter-TSS (NR_037217)",-321,"NR_039536",100628606,null,"NR_039536","ENSMUSG00000105841","Mir3960","mmu-mir-3960","microRNA 3960","ncRNA"]
[6443,"chr5",124540306,124542562,"+",0,"NA","intron (NM_019770, intron 1 of 3)","CpG",643,"NM_019770",56334,"Mm.325307","NM_019770","ENSMUSG00000029390","Tmed2","1110032D12Rik|1810020N21Rik|Rnp24|Sid394|p24beta1","transmembrane emp24 domain trafficking protein 2","protein-coding"]
[6277,"chr5",99250459,99253836,"+",0,"NA","intron (NM_181318, intron 1 of 13)","intron (NM_181318, intron 1 of 13)",780,"NM_181318",320292,"Mm.259074","NM_145839","ENSMUSG00000029333","Rasgef1b","4732452O09Rik|GPIgamma4|Gpig4","RasGEF domain family, member 1B","protein-coding"]
[6258,"chr5",91402529,91402842,"+",0,"NA","exon (NM_007568, exon 1 of 6)","exon (NM_007568, exon 1 of 6)",309,"NM_007568",12223,"Mm.2024","NM_007568","ENSMUSG00000082361","Btc","Bcn","betacellulin, epidermal growth factor family member","protein-coding"]
[1779,"chr12",51377586,51378103,"+",0,"NA","TTS (NM_001167963)","TTS (NM_001167963)",331,"NM_029825",76983,"Mm.216511","NM_029825","ENSMUSG00000020952","Scfd1","3110021P21Rik|RA410|STXBP1L2","Sec1 family domain containing 1","protein-coding"]
[4563,"chr2",74578456,74579503,"+",0,"NA","promoter-TSS (NM_001110209)","promoter-TSS (NM_001110209)",-31,"NM_027133",69605,"Mm.156113","NM_027133",null,"Lnp","2310011O18Rik|4921514L11Rik|9530051D01Rik|AI666268|Ul|ulnaless","limb and neural patterns","protein-coding"]
[607,"chr10",41809247,41811145,"+",0,"NA","promoter-TSS (NM_026643)","promoter-TSS (NM_026643)",-328,"NM_026643",103268,"Mm.338605","NM_026643","ENSMUSG00000019813","Cep57l1","2410017P07Rik|4930484D11Rik|AI607327|cep57R","centrosomal protein 57-like 1","protein-coding"]
[1807,"chr12",69168257,69169091,"+",0,"NA","promoter-TSS (NM_001081406)","promoter-TSS (NM_001081406)",-140,"NM_001081406",69706,"Mm.28847","NM_027178","ENSMUSG00000034883","Lrr1","2410005L11Rik|AU021780|LRR-1|Ppil5","leucine rich repeat protein 1","protein-coding"]
[2902,"chr15",93336219,93337527,"+",0,"NA","promoter-TSS (NR_028315)","promoter-TSS (NR_028315)",62,"NR_028315",67057,"Mm.4714","NM_024189","ENSMUSG00000022634","Yaf2","2810021M11Rik","YY1 associated factor 2","protein-coding"]
[5472,"chr4",31963370,31964812,"+",0,"NA","promoter-TSS (NM_172688)","promoter-TSS (NM_172688)",-16,"NM_009316",26409,"Mm.258589","NM_009316","ENSMUSG00000028284","Map3k7","B430101B05|C87327|Tak1","mitogen-activated protein kinase kinase kinase 7","protein-coding"]
[3093,"chr16",21995177,21999243,"+",0,"NA","Intergenic","Intergenic",-1668,"NM_001289581",239759,"Mm.33192","NM_153404","ENSMUSG00000044626","Liph","C130037N08Rik|D16Wsu119e|H06|Lpdlr|P3|PLA1B|lpd1|lpd2|mPA-PLA1","lipase, member H","protein-coding"]
[2508,"chr14",57103841,57104674,"+",0,"NA","intron (NM_008125, intron 1 of 1)","CpG",445,"NM_008125",14619,"Mm.390683","NM_008125","ENSMUSG00000046352","Gjb2","AI325222|Cnx26|Cx26|Gjb-2","gap junction protein, beta 2","protein-coding"]
[7397,"chr7",80401347,80405044,"+",0,"NA","promoter-TSS (NM_011046)","promoter-TSS (NM_011046)",-383,"NM_011046",18550,"Mm.5241","NM_011046","ENSMUSG00000030530","Furin","9130404I01Rik|Fur|PACE|Pcsk3|SPC1","furin (paired basic amino acid cleaving enzyme)","protein-coding"]
[1073,"chr11",46159682,46173686,"+",0,"NA","promoter-TSS (NM_172524)","promoter-TSS (NM_172524)",-325,"NM_172524",214112,"Mm.225253","NM_172524","ENSMUSG00000020411","Nipal4","9530066K23Rik","NIPA-like domain containing 4","protein-coding"]
[5264,"chr3",98012760,98015508,"+",0,"NA","intron (NM_010928, intron 1 of 33)","intron (NM_010928, intron 1 of 33)",596,"NM_010928",18129,"Mm.485843","NM_010928","ENSMUSG00000027878","Notch2","AI853703|N2","notch 2","protein-coding"]
[2187,"chr13",64161437,64162639,"+",0,"NA","exon (NM_019986, exon 1 of 8)","exon (NM_019986, exon 1 of 8)",172,"NM_019986",56541,"Mm.40989","NM_019986","ENSMUSG00000021476","Habp4","4933413D03Rik|4933428J01Rik","hyaluronic acid binding protein 4","protein-coding"]
[8279,"chr9",21030646,21032033,"+",0,"NA","promoter-TSS (NM_008319)","promoter-TSS (NM_008319)",-699,"NM_008319",15898,"Mm.4629","NM_008319","ENSMUSG00000032174","Icam5","CD50|ICAM-3|Icam3|TLN|Tlcn","intercellular adhesion molecule 5, telencephalin","protein-coding"]
[3860,"chr18",38418928,38420107,"+",0,"NA","intron (NM_022996, intron 1 of 7)","intron (NM_022996, intron 1 of 7)",542,"NM_022996",65113,"Mm.102496","NM_022996","ENSMUSG00000024425","Ndfip1","0610010M22Rik|N4wbp5","Nedd4 family interacting protein 1","protein-coding"]
[816,"chr10",88356513,88357669,"+",0,"NA","promoter-TSS (NM_027878)","promoter-TSS (NM_027878)",-16,"NM_027878",71712,"Mm.35450","NM_027878","ENSMUSG00000020057","Dram1","1200002N14Rik|Dram","DNA-damage regulated autophagy modulator 1","protein-coding"]
[5307,"chr3",108199454,108201372,"+",0,"NA","intron (NM_028061, intron 1 of 2)","intron (NM_028061, intron 1 of 2)",421,"NM_028061",72023,"Mm.246391","NM_028061","ENSMUSG00000048796","Cyb561d1","1600010M23Rik|AI605489|AW457162","cytochrome b-561 domain containing 1","protein-coding"]
[4260,"chr19",46348661,46350201,"+",0,"NA","promoter-TSS (NR_040418)","promoter-TSS (NR_040418)",-443,"NR_040418",75579,"Mm.436708","NR_040418",null,"2310034G01Rik","-","RIKEN cDNA 2310034G01 gene","ncRNA"]
[4010,"chr19",4697631,4699010,"+",0,"NA","exon (NM_001033447, exon 1 of 15)","exon (NM_001033447, exon 1 of 15)",348,"NM_001033447",381196,"Mm.297789","NM_001033447","ENSMUSG00000071691","Gm960","-","predicted gene 960","protein-coding"]
[6864,"chr6",92090906,92092884,"+",0,"NA","intron (NM_011630, intron 1 of 14)","CpG",477,"NM_011630",22026,"Mm.87062","NM_011630","ENSMUSG00000005893","Nr2c2","TAK1|Tr4|mKIAA4145","nuclear receptor subfamily 2, group C, member 2","protein-coding"]
[6362,"chr5",115326537,115328379,"+",0,"NA","exon (NM_025573, exon 1 of 4)","exon (NM_025573, exon 1 of 4)",281,"NR_036616",108014,"Mm.287826","NM_025573","ENSMUSG00000029538","Srsf9","25kDa|2610029M16Rik|SRp30c|Sfrs9","serine/arginine-rich splicing factor 9","protein-coding"]
[1700,"chr11",121259384,121261317,"+",0,"NA","exon (NM_001080932, exon 1 of 9)","exon (NM_001080932, exon 1 of 9)",363,"NM_001080932",68837,"Mm.209750","NM_001080932","ENSMUSG00000039275","Foxk2","1110054H05Rik|5730434B08Rik|6230415M23Rik|ILF|Ilf1","forkhead box K2","protein-coding"]
[6723,"chr6",47877688,47880169,"+",0,"NA","intron (NM_146175, intron 1 of 7)","intron (NM_146175, intron 1 of 7)",1373,"NM_146175",101095,"Mm.440186","NM_146175","ENSMUSG00000025821","Zfp282","AI449432|C81429|E430019K09Rik|HUB1","zinc finger protein 282","protein-coding"]
[8450,"chr9",59035692,59037286,"+",0,"NA","promoter-TSS (NM_001042752)","promoter-TSS (NM_001042752)",-48,"NM_001042752",18007,"Mm.42249","NM_008684","ENSMUSG00000032340","Neo1","2610028H22Rik|AI327052|D930014N22Rik|Igdcc2","neogenin","protein-coding"]
[4240,"chr19",44985101,44987496,"+",0,"NA","Intergenic","ID_B1|SINE|B4",-1748,"NR_040294",73894,"Mm.491408","NR_040294",null,"4930414N06Rik","-","RIKEN cDNA 4930414N06 gene","ncRNA"]
[3261,"chr16",93832316,93833122,"+",0,"NA","intron (NM_001045529, intron 1 of 16)","CpG",598,"NM_001045529",338467,"Mm.287329","NM_001045529","ENSMUSG00000039456","Morc3","1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3","microrchidia 3","protein-coding"]
[8116,"chr8",106935428,106936284,"+",0,"NA","exon (NM_009229, exon 1 of 7)","exon (NM_009229, exon 1 of 7)",106,"NM_009229",20650,"Mm.30228","NM_009229","ENSMUSG00000041308","Sntb2","Snt2","syntrophin, basic 2","protein-coding"]
[2131,"chr13",49652317,49653682,"+",0,"NA","promoter-TSS (NR_073168)","promoter-TSS (NR_073168)",-79,"NM_001271397",70930,"Mm.258915","NM_001081350","ENSMUSG00000021392","Nol8","4921532D18Rik|5730412B09Rik","nucleolar protein 8","protein-coding"]
[1339,"chr11",80209156,80209602,"+",0,"NA","intron (NM_021536, intron 1 of 18)","CpG",324,"NM_021536",59040,"Mm.489674","NM_021536","ENSMUSG00000017686","Rhot1","2210403N23Rik|AA415293|AF244542|AI834919|Arht1|C430039G08Rik|Miro1","ras homolog gene family, member T1","protein-coding"]
[2338,"chr14",11161105,11161990,"+",0,"NA","intron (NM_001308285, intron 1 of 9)","intron (NM_001308285, intron 1 of 9)",488,"NM_010210",14198,"Mm.397619","NM_010210","ENSMUSG00000060579","Fhit","AW045638|Fra14A2","fragile histidine triad gene","protein-coding"]
[2120,"chr13",47193223,47195752,"+",0,"NA","intron (NM_001170643, intron 1 of 7)","intron (NM_001170643, intron 1 of 7)",484,"NM_001170643",218215,"Mm.287609","NM_146042","ENSMUSG00000038068","Rnf144b","BC025007|E130105P19Rik|Ibrdc2|Pir2","ring finger protein 144B","protein-coding"]
[8784,"chrX",12672928,12674021,"+",0,"NA","exon (NM_175141, exon 1 of 7)","exon (NM_175141, exon 1 of 7)",165,"NM_175141",69155,"Mm.15974","NM_175141","ENSMUSG00000044148","1810030O07Rik","-","RIKEN cDNA 1810030O07 gene","protein-coding"]
[8511,"chr9",70139847,70142387,"+",0,"NA","intron (NM_029784, intron 1 of 8)","CpG",440,"NM_029784",76886,"Mm.44355","NM_029784","ENSMUSG00000032224","Fam81a","6430514L14Rik","family with sequence similarity 81, member A","protein-coding"]
[8129,"chr8",109705133,109706474,"+",0,"NA","promoter-TSS (NM_029468)","promoter-TSS (NM_029468)",-216,"NM_029468",75871,"Mm.180410","NM_029468","ENSMUSG00000031728","Zfp821","4930566A11Rik|Znf821","zinc finger protein 821","protein-coding"]
[8335,"chr9",37488216,37490252,"+",0,"NA","promoter-TSS (NM_146222)","promoter-TSS (NM_146222)",-87,"NM_146222",235184,"Mm.127892","NM_146222","ENSMUSG00000042138","Msantd2","2810450G17Rik|9530092B10Rik","Myb/SANT-like DNA-binding domain containing 2","protein-coding"]
[4636,"chr2",103760516,103761913,"+",0,"NA","promoter-TSS (NM_153126)","promoter-TSS (NM_153126)",36,"NM_153126",98956,"Mm.288005","NM_153126","ENSMUSG00000027185","Nat10","AI429152","N-acetyltransferase 10","protein-coding"]
[6664,"chr6",29735047,29736208,"+",0,"NA","5' UTR (NM_176996, exon 1 of 12)","5' UTR (NM_176996, exon 1 of 12)",130,"NM_176996",319757,"Mm.29279","NM_176996","ENSMUSG00000001761","Smo","E130215L21Rik|Smoh|bnb|smoothened","smoothened, frizzled class receptor","protein-coding"]
[2147,"chr13",54503872,54504237,"+",0,"NA","intron (NM_176987, intron 1 of 9)","CpG",249,"NM_176987",319719,"Mm.376151","NM_176987","ENSMUSG00000043183","Simc1","4732471D19Rik","SUMO-interacting motifs containing 1","protein-coding"]
[1581,"chr11",109345901,109348131,"+",0,"NA","non-coding (NR_027883, exon 1 of 2)","non-coding (NR_027883, exon 1 of 2)",149,"NR_027883",67927,"Mm.394490","NR_027883","ENSMUSG00000099630","1700096J18Rik","-","RIKEN cDNA 1700096J18 gene","ncRNA"]
[3997,"chr19",4191185,4192970,"+",0,"NA","promoter-TSS (NM_031868)","promoter-TSS (NM_031868)",-97,"NM_031868",19045,"Mm.1970","NM_031868","ENSMUSG00000040385","Ppp1ca","Ppp1c|dism2","protein phosphatase 1, catalytic subunit, alpha isoform","protein-coding"]
[1507,"chr11",101168609,101174399,"+",0,"NA","promoter-TSS (NM_146030)","promoter-TSS (NM_146030)",-202,"NM_146030",217198,"Mm.273254","NM_146030","ENSMUSG00000035172","Plekhh3","BC020025","pleckstrin homology domain containing, family H (with MyTH4 domain) member 3","protein-coding"]
[1604,"chr11",115334104,115336011,"+",0,"NA","intron (NM_027132, intron 1 of 6)","intron (NM_027132, intron 1 of 6)",323,"NM_027132",69602,"Mm.101844","NM_027132","ENSMUSG00000018862","Otop3","2310011E08Rik","otopetrin 3","protein-coding"]
[6163,"chr5",36748090,36748995,"+",0,"NA","exon (NM_133724, exon 1 of 1)","exon (NM_133724, exon 1 of 1)",137,"NM_133724",117197,"Mm.46744","NM_133724","ENSMUSG00000060708","Bloc1s4","2610101N07Rik|Blos4|Cno","biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino","protein-coding"]
[7589,"chr7",126695400,126696594,"+",0,"NA","promoter-TSS (NM_029420)","promoter-TSS (NM_029420)",-3,"NM_175103",66162,"Mm.358692","NM_175103",null,"Bola2","1110025L05Rik|BolA-2","bolA-like 2 (E. coli)","protein-coding"]
[4592,"chr2",85046342,85051696,"+",0,"NA","Intergenic","Intergenic",-1441,"NM_001081260",228140,"Mm.23606","NM_001081260","ENSMUSG00000033955","Tnks1bp1","Tab182|mKIAA1741","tankyrase 1 binding protein 1","protein-coding"]
[4096,"chr19",8756461,8757774,"+",0,"NA","promoter-TSS (NM_016813)","promoter-TSS (NM_016813)",0,"NM_001276704",53319,"Mm.7271","NM_016813","ENSMUSG00000010097","Nxf1","Mex67|Mvb1|Tap","nuclear RNA export factor 1","protein-coding"]
[8272,"chr9",20726401,20729229,"+",0,"NA","intron (NM_173777, intron 1 of 5)","CpG",399,"NM_173777",244723,"Mm.293552","NM_173777","ENSMUSG00000032172","Olfm2","A030009A06Rik","olfactomedin 2","protein-coding"]
[1140,"chr11",58214358,58214878,"+",0,"NA","promoter-TSS (NM_019440)","promoter-TSS (NM_019440)",-359,"NM_019440",54396,"Mm.458517","NM_019440","ENSMUSG00000069874","Irgm2","AI481100|GTPI|Ifggd2|Iigp2","immunity-related GTPase family M member 2","protein-coding"]
[4736,"chr2",126673733,126676459,"+",0,"NA","intron (NM_001271470, intron 1 of 8)","CpG",496,"NM_001271469",14391,"Mm.293266","NM_010249","ENSMUSG00000027361","Gabpb1","BABPB2|E4TF1|E4TF1-47|E4TF1-53|E4Tf1B|GABPB|GABPB-1|GABPB-2|GABPB1-1|GABPB1-2|NRF2B1|NRF2B2","GA repeat binding protein, beta 1","protein-coding"]
[3417,"chr17",27818722,27822741,"+",0,"NA","promoter-TSS (NM_001271511)","promoter-TSS (NM_001271511)",-189,"NM_001271511",224647,"Mm.196577","NM_001033279","ENSMUSG00000056692","D17Wsu92e","AU020189|C030010A15|C80239","DNA segment, Chr 17, Wayne State University 92, expressed","protein-coding"]
[4922,"chr2",164497235,164497865,"+",0,"NA","promoter-TSS (NM_133779)","promoter-TSS (NM_133779)",25,"NM_133779",78928,"Mm.28228","NM_133779","ENSMUSG00000017721","Pigt","2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7","phosphatidylinositol glycan anchor biosynthesis, class T","protein-coding"]
[275,"chr1",119912800,119913524,"+",0,"NA","promoter-TSS (NM_175106)","promoter-TSS (NM_175106)",6,"NM_175106",66343,"Mm.49942","NM_175106","ENSMUSG00000036975","Tmem177","2300008B03Rik","transmembrane protein 177","protein-coding"]
[8755,"chrX",7318835,7319009,"+",0,"NA","intron (NM_001243762, intron 1 of 13)","CpG",436,"NM_001243762",12728,"Mm.486257","NM_016691","ENSMUSG00000004317","Clcn5","5430408K11Rik|ClC-5|Clc5|D930009B12Rik|DXImx42e|Sfc13|T25545","chloride channel 5","protein-coding"]
[3626,"chr17",53583861,53584925,"+",0,"NA","intron (NM_001190846, intron 1 of 17)","intron (NM_001190846, intron 1 of 17)",267,"NM_001190846",18519,"Mm.255025","NM_020005","ENSMUSG00000000708","Kat2b","A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF","K(lysine) acetyltransferase 2B","protein-coding"]
[3314,"chr17",17373768,17376167,"+",0,"NA","intron (NM_025934, intron 1 of 9)","intron (NM_025934, intron 1 of 9)",635,"NM_025934",67045,"Mm.35117","NM_025934","ENSMUSG00000023852","Riok2","2010110K24Rik|2410085M17Rik","RIO kinase 2 (yeast)","protein-coding"]
[2208,"chr13",67552280,67553135,"+",0,"NA","promoter-TSS (NR_131099)","promoter-TSS (NR_131099)",445,"NM_001035231",212276,"Mm.422831","NM_183145","ENSMUSG00000095432","Zfp748","KRAB-O|Rslcan20/21|Zfp208|mszf54","zinc finger protein 748","protein-coding"]
[4459,"chr2",32287003,32289426,"+",0,"NA","promoter-TSS (NM_133852)","promoter-TSS (NM_133852)",-39,"NM_133852",99412,"Mm.106376","NM_133852","ENSMUSG00000002546","Golga2","AW555139|GM130|mKIAA4150","golgi autoantigen, golgin subfamily a, 2","protein-coding"]
[1731,"chr12",16811011,16811234,"+",0,"NA","non-coding (NR_027677, exon 1 of 8)","non-coding (NR_027677, exon 1 of 8)",157,"NM_033270",50496,"Mm.23296","NM_033270","ENSMUSG00000057469","E2f6","AI462434|E2F6b|EMA","E2F transcription factor 6","protein-coding"]
[7158,"chr7",25686142,25690086,"+",0,"NA","exon (NM_011577, exon 1 of 7)","exon (NM_011577, exon 1 of 7)",1112,"NM_011577",21803,"Mm.248380","NM_011577","ENSMUSG00000002603","Tgfb1","TGF-beta1|TGFbeta1|Tgfb|Tgfb-1","transforming growth factor, beta 1","protein-coding"]
[5820,"chr4",129818414,129824049,"+",0,"NA","intron (NM_001164745, intron 1 of 5)","intron (NM_001164745, intron 1 of 5)",523,"NM_001164745",19244,"Mm.193688","NM_008974","ENSMUSG00000028788","Ptp4a2","Prl-2","protein tyrosine phosphatase 4a2","protein-coding"]
[1500,"chr11",100968390,100971333,"+",0,"NA","intron (NM_008986, intron 1 of 1)","CpG",756,"NM_008986",19285,"Mm.21864","NM_008986","ENSMUSG00000004044","Ptrf","2310075E07Rik|AW546441|Cav-p60|Cavin","polymerase I and transcript release factor","protein-coding"]
[4275,"chr19",47864537,47866154,"+",0,"NA","promoter-TSS (NM_026619)","promoter-TSS (NM_026619)",-200,"NM_030051",68214,"Mm.63791","NM_026619","ENSMUSG00000025069","Gsto2","1700020F09Rik|4930425C18Rik|GSTO 2-2","glutathione S-transferase omega 2","protein-coding"]
[4812,"chr2",146511103,146511972,"+",0,"NA","intron (NM_001033348, intron 1 of 40)","intron (NM_001033348, intron 1 of 40)",467,"NM_001033348",241694,"Mm.222310","NM_001033348","ENSMUSG00000037110","Ralgapa2","A230067G21Rik|AS250|BC053994|RGC2|pp250","Ral GTPase activating protein, alpha subunit 2 (catalytic)","protein-coding"]
[4103,"chr19",8840543,8841395,"+",0,"NA","intron (NM_001290823, intron 1 of 10)","intron (NM_001290823, intron 1 of 10)",466,"NM_001290823",14705,"Mm.345134","NM_008144","ENSMUSG00000071657","Bscl2","2900097C17Rik|AI046355|Gng3lg","Berardinelli-Seip congenital lipodystrophy 2 homolog (seipin)","protein-coding"]
[4175,"chr19",29945040,29946483,"+",0,"NA","promoter-TSS (NM_001164724)","promoter-TSS (NM_001164724)",-29,"NM_001164724",77125,"Mm.182359","NM_133775","ENSMUSG00000024810","Il33","9230117N10Rik|Il-33|Il1f11|NF-HEV","interleukin 33","protein-coding"]
[5693,"chr4",116016795,116020443,"+",0,"NA","promoter-TSS (NM_010173)","promoter-TSS (NM_010173)",-717,"NM_010173",14073,"Mm.256025","NM_010173","ENSMUSG00000034171","Faah","AW412498","fatty acid amide hydrolase","protein-coding"]
[8213,"chr8",123518943,123519354,"+",0,"NA","intron (NM_018855, intron 1 of 10)","intron (NM_018855, intron 1 of 10)",313,"NM_018855",104346,"Mm.117265","NM_018855","ENSMUSG00000040220","Gas8","Gas11","growth arrest specific 8","protein-coding"]
[4073,"chr19",6941058,6943089,"+",0,"NA","promoter-TSS (NM_001285453)","promoter-TSS (NM_001285453)",212,"NM_007522",12015,"Mm.4387","NM_007522","ENSMUSG00000024959","Bad","AI325008|Bbc2","BCL2-associated agonist of cell death","protein-coding"]
[3410,"chr17",27133441,27134233,"+",0,"NA","promoter-TSS (NM_026063)","promoter-TSS (NM_026063)",54,"NM_026063",67267,"Mm.272389","NM_026063","ENSMUSG00000024208","Uqcc2","2900010M23Rik|Cbp6|M19|Mnf1","ubiquinol-cytochrome c reductase complex assembly factor 2","protein-coding"]
[1295,"chr11",76242946,76244217,"+",0,"NA","promoter-TSS (NM_183263)","promoter-TSS (NM_183263)",118,"NM_026029",67201,"Mm.482113","NM_026029","ENSMUSG00000017286","Glod4","1700082G03Rik|2700085E05Rik|C81254","glyoxalase domain containing 4","protein-coding"]
[8679,"chr9",109073455,109074476,"+",0,"NA","exon (NM_172774, exon 1 of 13)","exon (NM_172774, exon 1 of 13)",159,"NM_172774",235610,"Mm.100622","NM_172774","ENSMUSG00000025646","Atrip","6620401K05Rik","ATR interacting protein","protein-coding"]
[2832,"chr15",80133284,80134201,"+",0,"NA","intron (NM_025609, intron 1 of 10)","intron (NM_025609, intron 1 of 10)",588,"NM_025609",66513,"Mm.288245","NM_025609","ENSMUSG00000022414","Tab1","2310012M03Rik|Map3k7ip1|b2b449Clo","TGF-beta activated kinase 1/MAP3K7 binding protein 1","protein-coding"]
[5403,"chr3",146404106,146407404,"+",0,"NA","intron (NM_001253769, intron 1 of 13)","intron (NM_001253769, intron 1 of 13)",1113,"NM_138744",99167,"Mm.200783","NM_138744","ENSMUSG00000036825","Ssx2ip","AU014939|AU042321|Adip","synovial sarcoma, X breakpoint 2 interacting protein","protein-coding"]
[3281,"chr17",4993297,4997378,"+",0,"NA","exon (NM_001085355, exon 1 of 20)","exon (NM_001085355, exon 1 of 20)",263,"NM_001085355",239985,"Mm.133401","NM_001085355","ENSMUSG00000069729","Arid1b","8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235","AT rich interactive domain 1B (SWI-like)","protein-coding"]
[8702,"chr9",114639437,114640074,"+",0,"NA","intron (NM_153585, intron 1 of 19)","intron (NM_153585, intron 1 of 19)",445,"NM_153585",78893,"Mm.283708","NM_153585","ENSMUSG00000056167","Cnot10","2600001P13Rik","CCR4-NOT transcription complex, subunit 10","protein-coding"]
[6018,"chr4",155562487,155564950,"+",0,"NA","promoter-TSS (NM_001159637)","promoter-TSS (NM_001159637)",-97,"NM_001159637",192185,"Mm.28347","NM_138671","ENSMUSG00000029063","Nadk","4432404C02Rik|BC004012","NAD kinase","protein-coding"]
[4055,"chr19",6066905,6068268,"+",0,"NA","TTS (NM_001081041)","TTS (NM_001081041)",264,"NM_028454",73166,"Mm.489613","NM_028454","ENSMUSG00000024799","Tm7sf2","3110041O18Rik|ANG1|C14SR|Dhcr14","transmembrane 7 superfamily member 2","protein-coding"]
[3271,"chr16",97356763,97358285,"+",0,"NA","intron (NM_019517, intron 1 of 8)","intron (NM_019517, intron 1 of 8)",796,"NM_019517",56175,"Mm.97885","NM_019517","ENSMUSG00000040605","Bace2","1110059C24Rik|AEPLC|AI850424|ALP56|ARP1|ASP21|BAE2|CDA13|CEAP1|DRAP","beta-site APP-cleaving enzyme 2","protein-coding"]
[7408,"chr7",81691609,81693467,"+",0,"NA","intron (NM_011983, intron 1 of 8)","RMER15|LTR|ERVL",427,"NM_001164087",26557,"Mm.228","NM_011983","ENSMUSG00000025813","Homer2","9330120H11Rik|AW539445|CPD|Vesl-2","homer homolog 2 (Drosophila)","protein-coding"]
[6219,"chr5",72200720,72204138,"+",0,"NA","promoter-TSS (NM_153389)","promoter-TSS (NM_153389)",-900,"NR_003966",231287,"Mm.32775","NM_153389","ENSMUSG00000046808","Atp10d","9830145H18Rik|ATPVD|D5Buc24e","ATPase, class V, type 10D","protein-coding"]
[8236,"chr9",3403649,3404833,"+",0,"NA","intron (NM_027545, intron 1 of 17)","intron (NM_027545, intron 1 of 17)",156,"NM_027545",244672,"Mm.245482","NM_027545","ENSMUSG00000025898","Cwf19l2","3230401L03Rik|9030209E10","CWF19-like 2, cell cycle control (S. pombe)","protein-coding"]
[4807,"chr2",144594187,144594686,"+",0,"NA","intron (NM_001033297, intron 1 of 1)","intron (NM_001033297, intron 1 of 1)",371,"NM_001033297",228715,"Mm.27391","NM_001033297","ENSMUSG00000074754","Gm561","-","predicted gene 561","protein-coding"]
[2938,"chr15",99285011,99285489,"+",0,"NA","intron (NM_001081254, intron 2 of 7)","intron (NM_001081254, intron 2 of 7)",1930,"NM_001081254",545136,"Mm.324745","NM_001081254","ENSMUSG00000078907","Fam186b","EG545136","family with sequence similarity 186, member B","protein-coding"]
[3915,"chr18",64516116,64517571,"+",0,"NA","promoter-TSS (NM_027350)","promoter-TSS (NM_027350)",-286,"NM_001142950",70223,"Mm.29192","NM_027350","ENSMUSG00000024587","Nars","3010001M15Rik|AA960128|ASNRS|C78150","asparaginyl-tRNA synthetase","protein-coding"]
[5126,"chr3",84581250,84583148,"+",0,"NA","intron (NM_001293801, intron 1 of 7)","intron (NM_001293801, intron 1 of 7)",426,"NM_001081093",99889,"Mm.316536","NM_001081093","ENSMUSG00000074513","Arfip1","2310030I10Rik|Arfaptin|D3Ertd598e","ADP-ribosylation factor interacting protein 1","protein-coding"]
[4516,"chr2",52424341,52426716,"+",0,"NA","promoter-TSS (NM_182994)","promoter-TSS (NM_182994)",-654,"NM_182994",75423,"Mm.314378","NM_182994","ENSMUSG00000036093","Arl5a","2410015N24Rik|2810410P22Rik|AA408731|AW610751|Arl5|T25534","ADP-ribosylation factor-like 5A","protein-coding"]
[4136,"chr19",16132252,16133475,"+",0,"NA","promoter-TSS (NM_008139)","promoter-TSS (NM_008139)",32,"NM_008139",14682,"Mm.439701","NM_008139","ENSMUSG00000024639","Gnaq","1110005L02Rik|6230401I02Rik|AA408290|AW060788|Dsk1|Dsk10|Galphaq|Gq|GqI","guanine nucleotide binding protein, alpha q polypeptide","protein-coding"]
[5151,"chr3",88486910,88497943,"+",0,"NA","intron (NM_001002011, intron 1 of 11)","intron (NM_001002011, intron 1 of 11)",886,"NM_019390",16905,"Mm.243014","NM_019390","ENSMUSG00000028063","Lmna","Dhe","lamin A","protein-coding"]
[3801,"chr18",30272921,30273116,"+",0,"NA","exon (NM_181414, exon 1 of 25)","exon (NM_181414, exon 1 of 25)",122,"NM_181414",225326,"Mm.194127","NM_181414","ENSMUSG00000033628","Pik3c3","5330434F23Rik|Vps34","phosphoinositide-3-kinase, class 3","protein-coding"]
[6692,"chr6",38352390,38356806,"+",0,"NA","promoter-TSS (NM_028421)","promoter-TSS (NM_028421)",5,"NM_028864",78781,"Mm.25243","NM_028421","ENSMUSG00000029826","Zc3hav1","1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP","zinc finger CCCH type, antiviral 1","protein-coding"]
[251,"chr1",98094654,98095513,"+",0,"NA","intron (NM_013626, intron 1 of 25)","CpG",549,"NM_013626",18484,"Mm.5121","NM_013626","ENSMUSG00000026335","Pam","PHM","peptidylglycine alpha-amidating monooxygenase","protein-coding"]
[1594,"chr11",113207792,113210426,"+",0,"NA","non-coding (NR_040276, exon 2 of 4)","non-coding (NR_040276, exon 2 of 4)",560,"NR_040276",319871,"Mm.383743","NR_040276","ENSMUSG00000085421","4732490B19Rik","-","RIKEN cDNA 4732490B19 gene","ncRNA"]
[369,"chr1",160195276,160195884,"+",0,"NA","intron (NM_025474, intron 1 of 2)","intron (NM_025474, intron 1 of 2)",320,"NM_025474",64659,"Mm.29599","NM_025474",null,"Mrps14","1810032L21Rik|AL022847|Rpms14","mitochondrial ribosomal protein S14","protein-coding"]
[4986,"chr2",180708763,180712938,"+",0,"NA","promoter-TSS (NM_177852)","promoter-TSS (NM_177852)",522,"NM_001289651",76425,"Mm.41464","NM_029607",null,"Gid8","2310003C23Rik|4833420G11Rik|AI451474|Twa1","GID complex subunit 8 homolog (S. cerevisiae)","protein-coding"]
[7861,"chr8",56549856,56552255,"+",0,"NA","promoter-TSS (NM_015791)","promoter-TSS (NM_015791)",-79,"NM_015791",50753,"Mm.251174","NM_015791",null,"Fbxo8","Fbx8","F-box protein 8","protein-coding"]
[1548,"chr11",103953548,103954401,"+",0,"NA","promoter-TSS (NM_008740)","promoter-TSS (NM_008740)",82,"NM_008740",18195,"Mm.260117","NM_008740","ENSMUSG00000034187","Nsf","AI316878|AU020090|AU067812|SKD2","N-ethylmaleimide sensitive fusion protein","protein-coding"]
[3900,"chr18",60774316,60775559,"+",0,"NA","intron (NM_020600, intron 1 of 4)","CpG",341,"NM_020600",20044,"Mm.43778","NM_020600","ENSMUSG00000024608","Rps14","2600014J02Rik|AL023078","ribosomal protein S14","protein-coding"]
[5634,"chr4",101418962,101420450,"+",0,"NA","promoter-TSS (NM_009647)","promoter-TSS (NM_009647)",3,"NM_009647",11639,"Mm.42040","NM_009647","ENSMUSG00000028527","Ak4","AK 4|Ak-3|Ak-4|Ak3|Ak3l1|D4Ertd274e","adenylate kinase 4","protein-coding"]
[5434,"chr4",9641256,9643664,"+",0,"NA","intron (NM_001290367, intron 1 of 22)","intron (NM_001290367, intron 1 of 22)",1257,"NM_001177853",65973,"Mm.222206","NM_023066","ENSMUSG00000028207","Asph","2310005F16Rik|3110001L23Rik|AI848629|AW261690|AW561901|BAH|C79816|cI-37","aspartate-beta-hydroxylase","protein-coding"]
[4053,"chr19",6045687,6048441,"+",0,"NA","promoter-TSS (NM_001164709)","promoter-TSS (NM_001164709)",-81,"NM_001164709",74126,"Mm.149870","NM_028769","ENSMUSG00000024807","Syvn1","1200010C09Rik|AW211966|C85322|D530017H19Rik|Hrd1","synovial apoptosis inhibitor 1, synoviolin","protein-coding"]
[1823,"chr12",70111412,70111897,"+",0,"NA","promoter-TSS (NR_104398)","promoter-TSS (NR_104398)",-25,"NR_104398",18080,"Mm.244047","NM_008697","ENSMUSG00000021068","Nin","3110068G20Rik|AI385615|AU024711|mKIAA1565","ninein","protein-coding"]
[5026,"chr3",22075380,22076097,"+",0,"NA","promoter-TSS (NM_030732)","promoter-TSS (NM_030732)",-914,"NM_030732",81004,"Mm.202966","NM_030732","ENSMUSG00000027630","Tbl1xr1","8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1","transducin (beta)-like 1X-linked receptor 1","protein-coding"]
[5999,"chr4",152086478,152087646,"+",0,"NA","intron (NR_104381, intron 1 of 21)","CpG",199,"NR_104381",269608,"Mm.332102","NM_001004156","ENSMUSG00000039713","Plekhg5","BC023181|Syx","pleckstrin homology domain containing, family G (with RhoGef domain) member 5","protein-coding"]
[5975,"chr4",149136954,149137130,"+",0,"NA","intron (NM_027263, intron 1 of 4)","intron (NM_027263, intron 1 of 4)",558,"NM_027263",69928,"Mm.260893","NM_027263","ENSMUSG00000073705","Apitd1","2610040C18Rik|2810407L01Rik|CENP-S","apoptosis-inducing, TAF9-like domain 1","protein-coding"]
[6613,"chr5",150521847,150523209,"+",0,"NA","promoter-TSS (NM_009765)","promoter-TSS (NM_009765)",-93,"NM_009765",12190,"Mm.236256","NM_009765","ENSMUSG00000041147","Brca2","Fancd1|RAB163","breast cancer 2, early onset","protein-coding"]
[5520,"chr4",43655986,43656753,"+",0,"NA","promoter-TSS (NM_026871)","promoter-TSS (NM_026871)",76,"NM_026871",68917,"Mm.25285","NM_026871","ENSMUSG00000028470","Hint2","1190005L05Rik","histidine triad nucleotide binding protein 2","protein-coding"]
[8527,"chr9",74952431,74953863,"+",0,"NA","promoter-TSS (NM_001113283)","promoter-TSS (NM_001113283)",94,"NM_001113283",235493,"Mm.208955","NM_153584","ENSMUSG00000034858","Fam214a","6330415I01Rik|AI553555|C130047D21Rik|Kiaa1370|mKIAA1370","family with sequence similarity 214, member A","protein-coding"]
[8051,"chr8",94213966,94215148,"+",0,"NA","promoter-TSS (NM_172410)","promoter-TSS (NM_172410)",-44,"NM_172410",71805,"Mm.458170","NM_172410","ENSMUSG00000032939","Nup93","2410008G02Rik","nucleoporin 93","protein-coding"]
[1496,"chr11",100770101,100771175,"+",0,"NA","intron (NM_031871, intron 1 of 8)","B1_Mus2|SINE|Alu",319,"NM_031871",80860,"Mm.37308","NM_031871","ENSMUSG00000017747","Ghdc","D11Lgp1e","GH3 domain containing","protein-coding"]
[8864,"chrX",74296685,74297723,"+",0,"NA","exon (NM_018794, exon 1 of 10)","exon (NM_018794, exon 1 of 10)",107,"NM_018794",54411,"Mm.21961","NM_018794","ENSMUSG00000019087","Atp6ap1","16A|AC45|AI316502|AW108110|Atp6ip1|Atp6s1|C7-1|CF2|VATPS1|XAP-3|mFLJ00383","ATPase, H+ transporting, lysosomal accessory protein 1","protein-coding"]
[1108,"chr11",52096982,52100864,"+",0,"NA","promoter-TSS (NM_019411)","promoter-TSS (NM_019411)",99,"NM_019411",19052,"Mm.260288","NM_019411",null,"Ppp2ca","PP2A|R75353","protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform","protein-coding"]
[2282,"chr13",98925033,98926978,"+",0,"NA","intron (NM_178716, intron 1 of 23)","CpG",379,"NM_178716",238799,"Mm.173286","NM_178716","ENSMUSG00000009470","Tnpo1","AU021749|D13Ertd688e|IPO2|Kpnb2|MIP|MIP1|TRN","transportin 1","protein-coding"]
[1014,"chr11",20631389,20633420,"+",0,"NA","intron (NM_001038625, intron 1 of 1)","CpG",427,"NM_001038625",58172,"Mm.339676","NM_021372","ENSMUSG00000049800","Sertad2","AB041541|AU021878|Kiaa0127|MNCb-1504|SEI-2|Sei2|TRIP-Br2|mKIAA0127","SERTA domain containing 2","protein-coding"]
[2760,"chr15",75887208,75891170,"+",0,"NA","promoter-TSS (NM_001282443)","promoter-TSS (NM_001282443)",-466,"NM_001282443",223645,null,"NM_001282443",null,"Mroh6","Gm19570","maestro heat-like repeat family member 6","protein-coding"]
[843,"chr10",99106661,99108672,"+",0,"NA","promoter-TSS (NM_015737)","promoter-TSS (NM_015737)",-469,"NM_015737",14426,"Mm.314","NM_015737","ENSMUSG00000090035","Galnt4","AV011803","UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4","protein-coding"]
[2529,"chr14",62331672,62332752,"+",0,"NA","intron (NM_026001, intron 1 of 10)","CpG",107,"NM_026001",67153,"Mm.26040","NM_026001","ENSMUSG00000021932","Rnaseh2b","1110019N06Rik|2610207P08Rik|Dleu8","ribonuclease H2, subunit B","protein-coding"]
[6499,"chr5",135994869,135997419,"+",0,"NA","intron (NM_001256097, intron 2 of 10)","intron (NM_001256097, intron 2 of 10)",1344,"NM_001256098",74198,"Mm.275574","NM_023742","ENSMUSG00000004947","Dtx2","2610524D08Rik|AA408415|AU022494|Deltex2","deltex 2 homolog (Drosophila)","protein-coding"]
[8926,"chrX",134540866,134542239,"+",0,"NA","TTS (NM_013482)","TTS (NM_013482)",118,"NM_013898",30058,"Mm.214504","NM_013898","ENSMUSG00000048007","Timm8a1","DXHXS1274E|Ddp1|Fci-12|Tim8a|Timm8a","translocase of inner mitochondrial membrane 8A1","protein-coding"]
[7846,"chr8",46210439,46210971,"+",0,"NA","intron (NM_007450, intron 1 of 3)","(CCGCG)n|Simple_repeat|Simple_repeat",304,"NM_007450",11739,"Mm.16228","NM_007450",null,"Slc25a4","AU019225|Ant1","solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4","protein-coding"]
[2315,"chr13",112463440,112466125,"+",0,"NA","intron (NM_010560, intron 1 of 16)","intron (NM_010560, intron 1 of 16)",712,"NM_010560",16195,"Mm.4364","NM_010560","ENSMUSG00000021756","Il6st","5133400A03Rik|AA389424|BB405851|CD130|D13Ertd699e|gp130","interleukin 6 signal transducer","protein-coding"]
[4677,"chr2",118479309,118480189,"+",0,"NA","promoter-TSS (NM_009273)","promoter-TSS (NM_009273)",-53,"NM_009273",20813,"Mm.363404","NM_009273","ENSMUSG00000009549","Srp14","14kDa|AW536328","signal recognition particle 14","protein-coding"]
[610,"chr10",42477680,42479037,"+",0,"NA","exon (NM_145743, exon 1 of 13)","exon (NM_145743, exon 1 of 13)",207,"NM_145743",215951,"Mm.89646","NM_145743","ENSMUSG00000038302","Lace1","CG8520","lactation elevated 1","protein-coding"]
[514,"chr10",3973212,3973708,"+",0,"NA","exon (NM_001170786, exon 1 of 28)","exon (NM_001170786, exon 1 of 28)",385,"NM_172308",270685,"Mm.184752","NM_172308","ENSMUSG00000040675","Mthfd1l","2410004L15Rik|AI647056|Fthfsdc1","methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like","protein-coding"]
[6426,"chr5",123523845,123524108,"+",0,"NA","intron (NM_023232, intron 1 of 5)","CpG",188,"NM_023232",66593,"Mm.46716","NM_023232","ENSMUSG00000029433","Diablo","0610041G12Rik|1700006L01Rik|AU040403|Smac","diablo homolog (Drosophila)","protein-coding"]
[1994,"chr12",116047224,116049066,"+",0,"NA","intron (NM_001286214, intron 1 of 2)","intron (NM_001286214, intron 1 of 2)",421,"NM_019565",56220,"Mm.254997","NM_019565","ENSMUSG00000042063","Zfp386","Kzf1|mKIAA4205","zinc finger protein 386 (Kruppel-like)","protein-coding"]
[7336,"chr7",47050376,47051228,"+",0,"NA","intron (NM_026436, intron 1 of 2)","CpG",162,"NM_026436",67893,"Mm.27338","NM_026436","ENSMUSG00000010307","Tmem86a","1810054O13Rik|AI414959|AW742698","transmembrane protein 86A","protein-coding"]
[6083,"chr5",24444533,24448109,"+",0,"NA","intron (NM_022418, intron 2 of 2)","intron (NM_022418, intron 2 of 2)",-1086,"NM_023229",66587,"Mm.28123","NM_023229","ENSMUSG00000028959","Fastk","0610011K02Rik|610011K02Rik","Fas-activated serine/threonine kinase","protein-coding"]
[3907,"chr18",61724268,61727377,"+",0,"NA","promoter-TSS (NR_029432)","promoter-TSS (NR_029432)",509,"NM_021296",17714,"Mm.269657","NM_021296","ENSMUSG00000024580","Grpel2","mt-GrpE#2|mt-Grpel2","GrpE-like 2, mitochondrial","protein-coding"]
[3857,"chr18",38209229,38212431,"+",0,"NA","Intergenic","Intergenic",-1068,"NM_029357",75599,"Mm.36560","NM_029357","ENSMUSG00000051375","Pcdh1","2010005A06Rik|AI585920","protocadherin 1","protein-coding"]
[8416,"chr9",54917379,54917630,"+",0,"NA","5' UTR (NM_177351, exon 1 of 5)","5' UTR (NM_177351, exon 1 of 5)",214,"NM_177351",235386,"Mm.259334","NM_177351","ENSMUSG00000035878","Hykk","Agphd1|C630028N24Rik","hydroxylysine kinase 1","protein-coding"]
[1136,"chr11",58007892,58011900,"+",0,"NA","intron (NM_028451, intron 1 of 18)","CpG",832,"NM_028451",73158,"Mm.248843","NM_028451","ENSMUSG00000037331","Larp1","1810024J12Rik|3110040D16Rik|Larp|mKIAA0731","La ribonucleoprotein domain family, member 1","protein-coding"]
[1175,"chr11",60877964,60879745,"+",0,"NA","5' UTR (NM_001168507, exon 1 of 3)","5' UTR (NM_001168507, exon 1 of 3)",184,"NM_173453",216821,"Mm.28063","NM_173453","ENSMUSG00000043284","Tmem11","5730466P16Rik|AA409091","transmembrane protein 11","protein-coding"]
[1683,"chr11",120632371,120634382,"+",0,"NA","5' UTR (NM_010756, exon 1 of 3)","5' UTR (NM_010756, exon 1 of 3)",171,"NM_010756",17134,"Mm.268010","NM_010756",null,"Mafg","AA545192|C630022N07Rik","v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)","protein-coding"]
[1382,"chr11",87126514,87127706,"+",0,"NA","promoter-TSS (NM_197987)","promoter-TSS (NM_197987)",35,"NM_197987",68729,"Mm.17436","NM_197987","ENSMUSG00000018548","Trim37","1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898","tripartite motif-containing 37","protein-coding"]
[1452,"chr11",97781659,97783058,"+",0,"NA","promoter-TSS (NR_028078)","promoter-TSS (NR_028078)",81,"NM_022891",65019,"Mm.140380","NM_022891","ENSMUSG00000071415","Rpl23","2810009A01Rik","ribosomal protein L23","protein-coding"]
[2384,"chr14",27335724,27337888,"+",0,"NA","intron (NM_001289687, intron 1 of 9)","intron (NM_001289687, intron 1 of 9)",769,"NM_001289687",71704,"Mm.248606","NM_027871","ENSMUSG00000021895","Arhgef3","1200004I24Rik|9830169H03Rik|C76747|Xpln","Rho guanine nucleotide exchange factor (GEF) 3","protein-coding"]
[5771,"chr4",125065427,125067294,"+",0,"NA","promoter-TSS (NM_175246)","promoter-TSS (NM_175246)",-333,"NM_175246",76793,"Mm.22548","NM_175246","ENSMUSG00000050213","Snip1","2410133M08Rik","Smad nuclear interacting protein 1","protein-coding"]
[1337,"chr11",80141448,80143440,"+",0,"NA","promoter-TSS (NM_183275)","promoter-TSS (NM_183275)",-291,"NM_183275",68550,"Mm.18466","NM_183275","ENSMUSG00000046909","Tefm","1110002N22Rik","transcription elongation factor, mitochondrial","protein-coding"]
[8710,"chr9",118149829,118150495,"+",0,"NA","promoter-TSS (NM_026442)","promoter-TSS (NM_026442)",34,"NM_026442",67899,"Mm.9953","NM_026442","ENSMUSG00000039163","Cmc1","2010110K16Rik|2010312P05Rik|AI596001","COX assembly mitochondrial protein 1","protein-coding"]
[6524,"chr5",137920391,137922841,"+",0,"NA","promoter-TSS (NM_007819)","promoter-TSS (NM_007819)",3,"NM_007819",13113,"Mm.289886","NM_007819","ENSMUSG00000029727","Cyp3a13","IIIAm2","cytochrome P450, family 3, subfamily a, polypeptide 13","protein-coding"]
[3101,"chr16",24392081,24395443,"+",0,"NA","promoter-TSS (NR_037954)","promoter-TSS (NR_037954)",-107,"NR_037954",68841,"Mm.361995","NR_037954",null,"Lppos","1110054M08Rik|AI481106","LIM domain containing preferred translocation partner in lipoma, opposite strand","ncRNA"]
[2098,"chr13",41015721,41017661,"+",0,"NA","intron (NM_025387, intron 1 of 5)","intron (NM_025387, intron 1 of 5)",441,"NM_025387",66154,"Mm.30005","NM_025387","ENSMUSG00000021361","Tmem14c","1110021D01Rik|AU020193|HSPC194","transmembrane protein 14C","protein-coding"]
[3837,"chr18",35702972,35703211,"+",0,"NA","promoter-TSS (NM_029669)","promoter-TSS (NM_029669)",53,"NM_029669",76594,"Mm.108596","NM_029669","ENSMUSG00000024350","Dnajc18","2700075B01Rik|AU041129","DnaJ (Hsp40) homolog, subfamily C, member 18","protein-coding"]
[6215,"chr5",67846534,67848096,"+",0,"NA","5' UTR (NM_001284345, exon 1 of 37)","5' UTR (NM_001284345, exon 1 of 37)",116,"NM_009727",11980,"Mm.153230","NM_009727","ENSMUSG00000037685","Atp8a1","AI481521|AI853962|APLT|AW743152|AW822227|Atp3a2|B230107D19Rik|ClassI","ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1","protein-coding"]
[3018,"chr16",11173536,11177042,"+",0,"NA","intron (NR_027502, intron 1 of 22)","B1_Mur4|SINE|Alu",1104,"NR_027502",106205,"Mm.226860","NM_145931","ENSMUSG00000037965","Zc3h7a","A430104C18Rik|AI447294|AW556219|HSPC055|Zc3h7|Zc3hdc7","zinc finger CCCH type containing 7 A","protein-coding"]
[2604,"chr14",101639873,101640699,"+",0,"NA","intron (NM_001168592, intron 1 of 2)","CpG",185,"NM_001033132",66200,"Mm.250474","NM_001033132","ENSMUSG00000075486","Commd6","1110059J08Rik|1700063H17Rik","COMM domain containing 6","protein-coding"]
[8795,"chrX",20662929,20663868,"+",0,"NA","intron (NM_001136085, intron 1 of 25)","intron (NM_001136085, intron 1 of 25)",502,"NM_001136085",22201,"Mm.1104","NM_009457","ENSMUSG00000001924","Uba1","A1S9|Sbx|Ube-1|Ube1x","ubiquitin-like modifier activating enzyme 1","protein-coding"]
[4974,"chr2",178414246,178414404,"+",0,"NA","promoter-TSS (NM_001081289)","promoter-TSS (NM_001081289)",138,"NM_001085501",228966,"Mm.472736","NM_001085501","ENSMUSG00000049999","Ppp1r3d","2610024M03Rik|Gm359","protein phosphatase 1, regulatory subunit 3D","protein-coding"]
[7171,"chr7",27329645,27334415,"+",0,"NA","intron (NM_175641, intron 4 of 32)","intron (NM_175641, intron 4 of 32)",1618,"NM_001113549",108075,"Mm.272251","NM_175641","ENSMUSG00000040488","Ltbp4","2310046A13Rik","latent transforming growth factor beta binding protein 4","protein-coding"]
[6690,"chr6",37441622,37442925,"+",0,"NA","promoter-TSS (NM_178661)","promoter-TSS (NM_178661)",-125,"NM_178661",208647,"Mm.169929","NM_178661",null,"Creb3l2","BBF2H7|C530025K05Rik|SCIRR69","cAMP responsive element binding protein 3-like 2","protein-coding"]
[8357,"chr9",44334724,44335536,"+",0,"NA","exon (NM_010436, exon 1 of 1)","exon (NM_010436, exon 1 of 1)",415,"NM_010436",15270,"Mm.245931","NM_010436","ENSMUSG00000049932","H2afx","AW228881|H2A.X|H2ax|Hist5-2ax|gammaH2ax","H2A histone family, member X","protein-coding"]
[5651,"chr4",107252508,107254369,"+",0,"NA","promoter-TSS (NM_028394)","promoter-TSS (NM_028394)",95,"NM_029985",77809,"Mm.29681","NM_029985","ENSMUSG00000028617","Lrrc42","A930011F22Rik|AA536996","leucine rich repeat containing 42","protein-coding"]
[332,"chr1",143738993,143740504,"+",0,"NA","promoter-TSS (NM_001038594)","promoter-TSS (NM_001038594)",133,"NM_023505",69367,"Mm.272727","NM_023505","ENSMUSG00000018196","Glrx2","1700010P22Rik|AI645710|Grx2","glutaredoxin 2 (thioltransferase)","protein-coding"]
[1965,"chr12",110736901,110739595,"+",0,"NA","exon (NM_027149, exon 1 of 3)","exon (NM_027149, exon 1 of 3)",299,"NM_027149",69641,"Mm.491226","NM_027149","ENSMUSG00000037957","Wdr20","2310040A13Rik|AI549910|Wdr20a","WD repeat domain 20","protein-coding"]
[745,"chr10",80114338,80118710,"+",0,"NA","non-coding (NR_126043, exon 1 of 11)","non-coding (NR_126043, exon 1 of 11)",721,"NM_001301854",20869,"Mm.44231","NM_011492","ENSMUSG00000003068","Stk11","AA408040|Lkb1|Par-4|R75140","serine/threonine kinase 11","protein-coding"]
[3691,"chr17",71779881,71786087,"+",0,"NA","intron (NM_030179, intron 1 of 15)","CpG",1037,"NM_030179",78785,"Mm.196382","NM_030179","ENSMUSG00000024059","Clip4","1700024K14Rik|1700074B05Rik|4833417L20Rik|5830409B12Rik|Rsnl2","CAP-GLY domain containing linker protein family, member 4","protein-coding"]
[7779,"chr8",22185424,22185753,"+",0,"NA","intron (NM_001004140, intron 1 of 8)","CpG",231,"NM_001004140",80986,"Mm.22448","NM_001004140","ENSMUSG00000037725","Ckap2","AI461656|AW228814|LB1","cytoskeleton associated protein 2","protein-coding"]
[3650,"chr17",56716465,56718182,"+",0,"NA","promoter-TSS (NM_178926)","promoter-TSS (NM_178926)",376,"NM_001166474",106639,"Mm.37290","NM_178926","ENSMUSG00000054723","Vmac","AI662250","vimentin-type intermediate filament associated coiled-coil protein","protein-coding"]
[5673,"chr4",109664553,109667511,"+",0,"NA","promoter-TSS (NM_007671)","promoter-TSS (NM_007671)",-660,"NM_007671",12580,"Mm.1912","NM_007671","ENSMUSG00000028551","Cdkn2c","C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c","cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)","protein-coding"]
[2082,"chr13",36117306,36118065,"+",0,"NA","promoter-TSS (NM_001039189)","promoter-TSS (NM_001039189)",42,"NM_001039189",69955,"Mm.70690","NM_024274","ENSMUSG00000021420","Fars2","Fars1|pheRS","phenylalanine-tRNA synthetase 2 (mitochondrial)","protein-coding"]
[3789,"chr18",21299697,21300080,"+",0,"NA","5' UTR (NM_001033445, exon 1 of 6)","5' UTR (NM_001033445, exon 1 of 6)",251,"NM_001033445",381126,"Mm.312276","NM_001033445","ENSMUSG00000042680","Garem","C86169|Fam59a|Gm944|mKIAA4238","GRB2 associated, regulator of MAPK1","protein-coding"]
[2713,"chr15",55071617,55072618,"+",0,"NA","promoter-TSS (NM_001081288)","promoter-TSS (NM_001081288)",35,"NM_001081288",319944,"Mm.380957","NM_001081288","ENSMUSG00000037343","Taf2","150kDa|4732460C16Rik|AI425886|CIF150|TAF2B|TAFII-150|TAFII150","TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor","protein-coding"]
[4182,"chr19",32755714,32758818,"+",0,"NA","promoter-TSS (NM_008960)","promoter-TSS (NM_008960)",-311,"NM_008960",19211,"Mm.245395","NM_008960","ENSMUSG00000013663","Pten","2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|TEP1","phosphatase and tensin homolog","protein-coding"]
[6279,"chr5",100038491,100040578,"+",0,"NA","promoter-TSS (NR_027990)","promoter-TSS (NR_027990)",-312,"NM_016690",50926,"Mm.389579","NM_016690","ENSMUSG00000029328","Hnrnpdl","AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|JKTBP|hnRNP DL|hnRNP-DL","heterogeneous nuclear ribonucleoprotein D-like","protein-coding"]
[5461,"chr4",20004574,20005153,"+",0,"NA","intron (NR_040768, intron 2 of 4)","RMER17C|LTR|ERVK",876,"NR_040768",74988,"Mm.445292","NR_040768",null,"4930480G23Rik","-","RIKEN cDNA 4930480G23 gene","ncRNA"]
[1619,"chr11",115933096,115934218,"+",0,"NA","promoter-TSS (NM_020483)","promoter-TSS (NM_020483)",-2,"NM_020483",57230,"Mm.267810","NM_020483",null,"Sap30bp","2700016D05Rik|Hcngp","SAP30 binding protein","protein-coding"]
[6034,"chr4",155991527,155994059,"+",0,"NA","promoter-TSS (NM_080445)","promoter-TSS (NM_080445)",-50,"NM_011341",20318,"Mm.293517","NM_011341","ENSMUSG00000029076","Sdf4","Cab45","stromal cell derived factor 4","protein-coding"]
[5881,"chr4",134852441,134857247,"+",0,"NA","Intergenic","Intergenic",-1499,"NM_025382",66146,"Mm.99793","NM_025382","ENSMUSG00000028826","Tmem57","1110007C24Rik|9230118A01Rik|AI317300|AI606104|C61","transmembrane protein 57","protein-coding"]
[4265,"chr19",46572704,46573893,"+",0,"NA","promoter-TSS (NM_053196)","promoter-TSS (NM_053196)",-67,"NM_053196",94279,"Mm.296837","NM_053196","ENSMUSG00000025036","Sfxn2","C79732|F630107H02Rik","sideroflexin 2","protein-coding"]
[5219,"chr3",94658036,94658344,"+",0,"NA","intron (NM_011656, intron 1 of 12)","intron (NM_011656, intron 1 of 12)",682,"NM_001293728",22156,"Mm.10214","NM_011656","ENSMUSG00000005968","Tuft1","-","tuftelin 1","protein-coding"]
[7598,"chr7",126928544,126929321,"+",0,"NA","promoter-TSS (NM_172747)","promoter-TSS (NM_172747)",53,"NM_172747",233877,"Mm.245897","NM_172747","ENSMUSG00000030685","Kctd13","1500003N18Rik|AV259508|PDIP1alpha|Pdip1|Poldip1","potassium channel tetramerisation domain containing 13","protein-coding"]
[7569,"chr7",122065409,122067978,"+",0,"NA","promoter-TSS (NM_138589)","promoter-TSS (NM_138589)",393,"NM_026140",67417,"Mm.45171","NM_026140","ENSMUSG00000030871","Ears2","3230401I01Rik|mKIAA1970","glutamyl-tRNA synthetase 2 (mitochondrial)(putative)","protein-coding"]
[4007,"chr19",4509178,4509989,"+",0,"NA","promoter-TSS (NM_001162946)","promoter-TSS (NM_001162946)",-889,"NM_001162946",18563,"Mm.1845","NM_008797","ENSMUSG00000024892","Pcx","Pc|Pcb","pyruvate carboxylase","protein-coding"]
[6567,"chr5",143112331,143112945,"+",0,"NA","intron (NM_207110, intron 1 of 16)","CpG",382,"NM_207110",108086,"Mm.381440","NM_080561","ENSMUSG00000045078","Rnf216","2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1","ring finger protein 216","protein-coding"]
[8615,"chr9",105494350,105495924,"+",0,"NA","promoter-TSS (NM_001253836)","promoter-TSS (NM_001253836)",-4,"NM_001253836",235574,"Mm.326247","NM_175025","ENSMUSG00000032570","Atp2c1","1700121J11Rik|ATP2C1A|AW061228|BCPM|D930003G21Rik|HHD|SPCA|pmr1","ATPase, Ca++-sequestering","protein-coding"]
[2740,"chr15",65785771,65787920,"+",0,"NA","promoter-TSS (NM_133766)","promoter-TSS (NM_133766)",-196,"NM_133766",76740,"Mm.260647","NM_133766","ENSMUSG00000015002","Efr3a","A130089M23Rik|BB071175|C76891|C920006C10Rik|D030063F01Rik|mKIAA0143","EFR3 homolog A (S. cerevisiae)","protein-coding"]
[5703,"chr4",116626950,116627995,"+",0,"NA","promoter-TSS (NM_001284229)","promoter-TSS (NM_001284229)",25,"NM_001081475",50927,"Mm.257181","NM_016777","ENSMUSG00000028693","Nasp","5033430J04Rik|AI131596|AI317140|D4Ertd767e|Epcs32|Nasp-T","nuclear autoantigenic sperm protein (histone-binding)","protein-coding"]
[208,"chr1",86581877,86582840,"+",0,"NA","5' UTR (NM_008801, exon 1 of 5)","5' UTR (NM_008801, exon 1 of 5)",143,"NM_008801",18582,"Mm.12925","NM_008801","ENSMUSG00000026239","Pde6d","AI841218|PrBP/delta","phosphodiesterase 6D, cGMP-specific, rod, delta","protein-coding"]
[6318,"chr5",108659972,108660760,"+",0,"NA","promoter-TSS (NM_172997)","promoter-TSS (NM_172997)",35,"NM_172997",15932,"Mm.358608","NM_008325","ENSMUSG00000033540","Idua","6030426D08","iduronidase, alpha-L-","protein-coding"]
[2773,"chr15",76203284,76208540,"+",0,"NA","exon (NM_001163540, exon 1 of 33)","exon (NM_001163540, exon 1 of 33)",409,"NM_201389",18810,"Mm.234912","NM_011117","ENSMUSG00000022565","Plec","AA591047|AU042537|EBS1|PCN|PLTN|Plec1","plectin","protein-coding"]
[292,"chr1",131138077,131140036,"+",0,"NA","promoter-TSS (NM_145508)","promoter-TSS (NM_145508)",-822,"NM_145508",226419,"Mm.39299","NM_145508",null,"Dyrk3","BC006704","dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3","protein-coding"]
[6455,"chr5",129019386,129021098,"+",0,"NA","promoter-TSS (NM_009391)","promoter-TSS (NM_009391)",86,"NM_009391",19384,"Mm.297440","NM_009391","ENSMUSG00000029430","Ran","-","RAN, member RAS oncogene family","protein-coding"]
[4039,"chr19",5636392,5638827,"+",0,"NA","5' UTR (NM_009045, exon 1 of 11)","5' UTR (NM_009045, exon 1 of 11)",119,"NM_009045",19697,"Mm.249966","NM_009045","ENSMUSG00000024927","Rela","p65","v-rel reticuloendotheliosis viral oncogene homolog A (avian)","protein-coding"]
[2445,"chr14",49065529,49067278,"+",0,"NA","promoter-TSS (NM_144535)","promoter-TSS (NM_144535)",-92,"NM_144535",74385,"Mm.379235","NM_144535","ENSMUSG00000036291","Ap5m1","4932432K03Rik|Mu5|Mudeng","adaptor-related protein complex 5, mu 1 subunit","protein-coding"]
[8901,"chrX",101419591,101419770,"+",0,"NA","intron (NM_001177987, intron 1 of 6)","CpG",234,"NM_001177986",56364,"Mm.23458","NM_019831","ENSMUSG00000031310","Zmym3","9030216B10Rik|AW122925|DXS6673El|Zfp261","zinc finger, MYM-type 3","protein-coding"]
[291,"chr1",131096111,131097836,"+",0,"NA","intron (NM_008551, intron 1 of 9)","CpG",870,"NM_008551",17164,"Mm.221235","NM_008551","ENSMUSG00000016528","Mapkapk2","AA960234|MAPKAP-K2|MK-2|MK2|Rps6kc1","MAP kinase-activated protein kinase 2","protein-coding"]
[3703,"chr17",78199546,78201865,"+",0,"NA","5' UTR (NM_015800, exon 1 of 17)","5' UTR (NM_015800, exon 1 of 17)",457,"NM_015800",50766,"Mm.311912","NM_015800","ENSMUSG00000024074","Crim1","AU015004","cysteine rich transmembrane BMP regulator 1 (chordin like)","protein-coding"]
[7232,"chr7",30594160,30594795,"+",0,"NA","Intergenic","Intergenic",-1535,"NM_021397",58206,"Mm.116789","NM_021397","ENSMUSG00000006310","Zbtb32","4930524C15Rik|FAXF|FAZF|PLZP|Rog|Tzfp","zinc finger and BTB domain containing 32","protein-coding"]
[8205,"chr8",123155363,123158073,"+",0,"NA","intron (NM_020564, intron 2 of 6)","intron (NM_020564, intron 2 of 6)",1562,"NM_020564",57429,"Mm.6562","NM_020564","ENSMUSG00000000739","Sult5a1","Sult-x1|Sultx1","sulfotransferase family 5A, member 1","protein-coding"]
[114,"chr1",58392046,58394179,"+",0,"NA","promoter-TSS (NM_025824)","promoter-TSS (NM_025824)",-24,"NM_025824",66882,"Mm.21848","NM_025824","ENSMUSG00000051223","Bzw1","1200015E15Rik|mKIAA0005","basic leucine zipper and W2 domains 1","protein-coding"]
[5714,"chr4",117155187,117156991,"+",0,"NA","promoter-TSS (NM_009098)","promoter-TSS (NM_009098)",43,"NM_009098",20116,"Mm.260904","NM_009098","ENSMUSG00000047675","Rps8","-","ribosomal protein S8","protein-coding"]
[5778,"chr4",126254599,126257964,"+",0,"NA","promoter-TSS (NM_001145970)","promoter-TSS (NM_001145970)",38,"NM_144941",245877,"Mm.266716","NM_144941","ENSMUSG00000028849","Map7d1","AV028413|BC019977|Mtap7d1|Parcc1|Rprc1|mKIAA1187","MAP7 domain containing 1","protein-coding"]
[4879,"chr2",156143879,156144843,"+",0,"NA","promoter-TSS (NM_010911)","promoter-TSS (NM_010911)",128,"NM_025946",67067,"Mm.371623","NM_025946","ENSMUSG00000067847","Romo1","2010100O12Rik|AI853864","reactive oxygen species modulator 1","protein-coding"]
[4894,"chr2",157423868,157426178,"+",0,"NA","intron (NM_001025395, intron 1 of 13)","intron (NM_001025395, intron 1 of 13)",730,"NM_001025395",20779,"Mm.22845","NM_009271","ENSMUSG00000027646","Src","AW259666|pp60c-src","Rous sarcoma oncogene","protein-coding"]
[73,"chr1",40323718,40326838,"+",0,"NA","intron (NM_133193, intron 1 of 10)","intron (NM_133193, intron 1 of 10)",651,"NM_133193",107527,"Mm.155583","NM_133193","ENSMUSG00000070942","Il1rl2","AI481289|AW551444|IL-1Rrp2","interleukin 1 receptor-like 2","protein-coding"]
[7886,"chr8",69395051,69396029,"+",0,"NA","promoter-TSS (NR_038044)","promoter-TSS (NR_038044)",4,"NR_038044",378466,"Mm.37846","NM_194351",null,"Gm10033","9330175B10Rik|ENSMUSG00000057924|ENSMUSG00000071083|Gm10311","predicted gene 10033","ncRNA"]
[8873,"chrX",75130280,75130852,"+",0,"NA","intron (NM_008621, intron 1 of 11)","intron (NM_008621, intron 1 of 11)",450,"NM_008621",17524,"Mm.391267","NM_008621","ENSMUSG00000031402","Mpp1","55kDa|C130070C03Rik|p55","membrane protein, palmitoylated","protein-coding"]
[5479,"chr4",33207122,33207693,"+",0,"NA","Intergenic","Intergenic",-1584,"NM_177774",272009,"Mm.156636","NM_177774","ENSMUSG00000054679","Srsf12","B830039L16|Sfrs13b|Srrp|Srsf13b","serine/arginine-rich splicing factor 12","protein-coding"]
[241,"chr1",93443871,93446024,"+",0,"NA","intron (NM_133808, intron 1 of 27)","CpG",754,"NM_001301364",110611,"Mm.30012","NM_133808","ENSMUSG00000034088","Hdlbp","1110005P14Rik|AA960365|AI118566|D1Ertd101e","high density lipoprotein (HDL) binding protein","protein-coding"]
[2561,"chr14",70350571,70351216,"+",0,"NA","intron (NM_001135151, intron 1 of 9)","intron (NM_001135151, intron 1 of 9)",531,"NM_144808",213053,"Mm.270647","NM_144808","ENSMUSG00000022094","Slc39a14","FAD-123|ZIP-14|Zip14|fad123","solute carrier family 39 (zinc transporter), member 14","protein-coding"]
[8066,"chr8",95434159,95435687,"+",0,"NA","promoter-TSS (NM_008187)","promoter-TSS (NM_008187)",-54,"NM_008187",14894,"Mm.2080","NM_008187","ENSMUSG00000031796","Cfap20","2600014O15Rik|AL024127|Gtl3|T10-2A2","cilia and flagella associated protein 20","protein-coding"]
[6007,"chr4",154142663,154142974,"+",0,"NA","intron (NM_021499, intron 1 of 11)","intron (NM_021499, intron 1 of 11)",446,"NM_021499",59002,"Mm.46508","NM_021499","ENSMUSG00000029029","Wrap73","2610044M17Rik|5330425N03Rik|Dd57|Wdr8","WD repeat containing, antisense to Trp73","protein-coding"]
[1970,"chr12",111165443,111167072,"+",0,"NA","promoter-TSS (NM_011632)","promoter-TSS (NM_011632)",-113,"NM_001286122",22031,"Mm.27431","NM_011632","ENSMUSG00000021277","Traf3","AI528849|CAP-1|CD40bp|CRAF1|LAP1|T-BAM|amn","TNF receptor-associated factor 3","protein-coding"]
[4697,"chr2",119742007,119744271,"+",0,"NA","intron (NM_146125, intron 1 of 6)","CpG",802,"NM_146125",228550,"Mm.65337","NM_146125","ENSMUSG00000027296","Itpka","-","inositol 1,4,5-trisphosphate 3-kinase A","protein-coding"]
[2391,"chr14",30624038,30627252,"+",0,"NA","intron (NM_011103, intron 1 of 17)","CpG",563,"NM_011103",18753,"Mm.2314","NM_011103","ENSMUSG00000021948","Prkcd","AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd","protein kinase C, delta","protein-coding"]
[4125,"chr19",10948248,10949987,"+",0,"NA","exon (NM_023731, exon 1 of 4)","exon (NM_023731, exon 1 of 4)",149,"NM_023731",108673,"Mm.294908","NM_023731","ENSMUSG00000024732","Ccdc86","4933411H20Rik|6720480F16Rik|D19Ertd678e","coiled-coil domain containing 86","protein-coding"]
[4559,"chr2",73213829,73215013,"+",0,"NA","promoter-TSS (NM_025942)","promoter-TSS (NM_025942)",26,"NM_030091",67059,"Mm.22661","NM_025942","ENSMUSG00000027108","Ola1","2510025G09Rik|2810405J23Rik|2810409H07Rik|Gtpbp9|PTD004","Obg-like ATPase 1","protein-coding"]
[8617,"chr9",106169875,106171918,"+",0,"NA","promoter-TSS (NM_029896)","promoter-TSS (NM_029896)",-33,"NM_029896",77305,"Mm.265125","NM_029896","ENSMUSG00000020257","Wdr82","9430077D24Rik|CDW5/WDR82","WD repeat domain containing 82","protein-coding"]
[1864,"chr12",79207171,79211562,"+",0,"NA","intron (NM_030017, intron 1 of 6)","intron (NM_030017, intron 1 of 6)",453,"NM_030017",77974,"Mm.274373","NM_030017","ENSMUSG00000021123","Rdh12","-","retinol dehydrogenase 12","protein-coding"]
[3675,"chr17",66075924,66077843,"+",0,"NA","intron (NM_001025572, intron 1 of 12)","CpG",163,"NM_001025572",106585,"Mm.34706","NM_001025572","ENSMUSG00000034647","Ankrd12","2900001A12Rik|AI447928|ANCO-2|AV347965|GAC-1|mKIAA0874","ankyrin repeat domain 12","protein-coding"]
[4765,"chr2",130178509,130179840,"+",0,"NA","intron (NM_009225, intron 1 of 6)","CpG",190,"NM_009225",20638,"Mm.88216","NM_009225","ENSMUSG00000027404","Snrpb","AL024368|AU018828|SM-B|SM11|SMB|SNRNP-B","small nuclear ribonucleoprotein B","protein-coding"]
[3491,"chr17",33980316,33981697,"+",0,"NA","promoter-TSS (NR_033305)","promoter-TSS (NR_033305)",-486,"NR_033305",433100,"Mm.380381","NM_001013793",null,"AA388235","-","expressed sequence AA388235","ncRNA"]
[3952,"chr18",76240856,76242742,"+",0,"NA","promoter-TSS (NM_010754)","promoter-TSS (NM_010754)",98,"NM_010754",17126,"Mm.152699","NM_010754",null,"Smad2","7120426M23Rik|Madh2|Madr2|Smad-2|mMad2","SMAD family member 2","protein-coding"]
[7261,"chr7",35801929,35802989,"+",0,"NA","promoter-TSS (NR_033567)","promoter-TSS (NR_033567)",-133,"NR_033567",78547,"Mm.406883","NR_033567","ENSMUSG00000044997","E130304I02Rik","-","RIKEN cDNA E130304I02 gene","ncRNA"]
[2375,"chr14",25457183,25461577,"+",0,"NA","5' UTR (NM_183208, exon 1 of 24)","5' UTR (NM_183208, exon 1 of 24)",195,"NM_183208",328365,"Mm.227484","NM_183208","ENSMUSG00000007817","Zmiz1","BC065120|E330020C23|ENSMUSG00000072684|Gm10397|I920194n01|Rai17|Zimp10","zinc finger, MIZ-type containing 1","protein-coding"]
[24,"chr1",16687340,16689099,"+",0,"NA","promoter-TSS (NM_016923)","promoter-TSS (NM_016923)",-237,"NM_001159711",17087,"Mm.116844","NM_016923","ENSMUSG00000025779","Ly96","ESOP-1|MD-2|MD2","lymphocyte antigen 96","protein-coding"]
[2759,"chr15",75841386,75842418,"+",0,"NA","promoter-TSS (NM_172121)","promoter-TSS (NM_172121)",6,"NM_172121",223642,"Mm.209800","NM_172121","ENSMUSG00000075600","Zc3h3","BC049953|Kiaa0150|Smicl|Zc3hdc3","zinc finger CCCH type containing 3","protein-coding"]
[8348,"chr9",43201744,43206678,"+",0,"NA","intron (NM_011139, intron 1 of 12)","intron (NM_011139, intron 1 of 12)",1544,"NM_011139",18988,"Mm.436650","NM_011139","ENSMUSG00000032015","Pou2f3","Epoc-1|Oct-11a|Oct11|Otf-11|Otf11|Skin|Skin-1a|Skn-1a|Skn-li","POU domain, class 2, transcription factor 3","protein-coding"]
[3321,"chr17",21449962,21452208,"+",0,"NA","intron (NM_009558, intron 1 of 4)","Lx5b|LINE|L1",711,"NM_009558",22709,"Mm.293030","NM_009558","ENSMUSG00000023892","Zfp51","Zfp-51|zfec12","zinc finger protein 51","protein-coding"]
[7014,"chr6",143099481,143100033,"+",0,"NA","exon (NM_029897, exon 2 of 25)","exon (NM_029897, exon 2 of 25)",395,"NM_001286578",74741,"Mm.130260","NM_029081","ENSMUSG00000030279","C2cd5","5730419I09Rik|C030008B15Rik|CDP138","C2 calcium-dependent domain containing 5","protein-coding"]
[104,"chr1",55026437,55028542,"+",0,"NA","promoter-TSS (NM_031179)","promoter-TSS (NM_031179)",-11,"NM_031179",81898,"Mm.279736","NM_031179","ENSMUSG00000025982","Sf3b1","155kDa|2810001M05Rik|AA409119|Prp10|SAP155|SF3b155|TA-8|Targ4","splicing factor 3b, subunit 1","protein-coding"]
[8156,"chr8",111939651,111941242,"+",0,"NA","promoter-TSS (NM_026693)","promoter-TSS (NM_026693)",-257,"NM_026693",93739,"Mm.371666","NM_026693",null,"Gabarapl2","0610012F20Rik|2900019O08Rik|AI173605|GATE-16|Gef2","gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2","protein-coding"]
[8831,"chrX",52164295,52165263,"+",0,"NA","5' UTR (NM_008150, exon 1 of 9)","5' UTR (NM_008150, exon 1 of 9)",144,"NM_008150",14735,"Mm.1528","NM_008150","ENSMUSG00000031119","Gpc4","9530073D23Rik|AF311610|AI385680|AI661372|K-glypican","glypican 4","protein-coding"]
[3493,"chr17",34023779,34025485,"+",0,"NA","promoter-TSS (NM_009066)","promoter-TSS (NM_009066)",48,"NM_009066",19763,"Mm.20343","NM_009066","ENSMUSG00000024325","Ring1","Ring1A","ring finger protein 1","protein-coding"]
[7960,"chr8",75108832,75109830,"+",0,"NA","promoter-TSS (NM_008566)","promoter-TSS (NM_008566)",-178,"NM_001302540",17218,"Mm.5048","NM_008566","ENSMUSG00000005410","Mcm5","AA617332|AI324988|AL033333|Cdc46|Mcmd5|P1-CDC46","minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)","protein-coding"]
[4371,"chr2",25179713,25182754,"+",0,"NA","exon (NM_025980, exon 1 of 1)","exon (NM_025980, exon 1 of 1)",475,"NM_025980",67122,"Mm.46539","NM_025980","ENSMUSG00000078202","Nrarp","2700054M22Rik","Notch-regulated ankyrin repeat protein","protein-coding"]
[2175,"chr13",58214655,58217639,"+",0,"NA","promoter-TSS (NM_152234)","promoter-TSS (NM_152234)",-494,"NM_026842",56085,"Mm.182053","NM_026842","ENSMUSG00000005312","Ubqln1","1110046H03Rik|1810030E05Rik|AU019746|C77538|D13Ertd372e|Da41|Dsk2|Plic-1|Plic1|Xdrp1","ubiquilin 1","protein-coding"]
[1513,"chr11",101417024,101417745,"+",0,"NA","promoter-TSS (NM_144829)","promoter-TSS (NM_144829)",49,"NM_144829",69684,"Mm.146283","NM_144829","ENSMUSG00000075528","Aarsd1","1110069E20Rik|2310044P18Rik|AA589600|AlaX|AlaXp-II","alanyl-tRNA synthetase domain containing 1","protein-coding"]
[1264,"chr11",72689623,72691223,"+",0,"NA","intron (NM_009671, intron 1 of 24)","intron (NM_009671, intron 1 of 24)",421,"NM_009671",11736,"Mm.10313","NM_009671","ENSMUSG00000020790","Ankfy1","Ankhzn|ZFYVE14|mKIAA1255","ankyrin repeat and FYVE domain containing 1","protein-coding"]
[4905,"chr2",160728945,160732534,"+",0,"NA","promoter-TSS (NM_021280)","promoter-TSS (NM_021280)",-571,"NM_021280",18803,"Mm.44463","NM_021280","ENSMUSG00000016933","Plcg1","AI894140|Cded|Plc-1|Plc-gamma1|Plcg-1","phospholipase C, gamma 1","protein-coding"]
[47,"chr1",36368662,36369141,"+",0,"NA","intron (NM_001310513, intron 1 of 21)","CpG",280,"NM_172652",226976,"Mm.24734","NM_172652","ENSMUSG00000010453","Kansl3","4632411B12Rik|4932435K23|AI431067|AI647574|C85723|Kiaa1310|mKIAA1310","KAT8 regulatory NSL complex subunit 3","protein-coding"]
[5332,"chr3",116861247,116862054,"+",0,"NA","promoter-TSS (NM_009146)","promoter-TSS (NM_009146)",-30,"NM_009146",20321,"Mm.66293","NM_009146","ENSMUSG00000033386","Frrs1","AI131732|Sdfr2","ferric-chelate reductase 1","protein-coding"]
[3619,"chr17",48408303,48410902,"+",0,"NA","promoter-TSS (NM_001289490)","promoter-TSS (NM_001289490)",218,"NM_001110832",18044,"Mm.4929","NM_010913","ENSMUSG00000023994","Nfya","AA407810|Cbf-b|SEZ-10|SEZ10","nuclear transcription factor-Y alpha","protein-coding"]
[6296,"chr5",104045858,104048144,"+",0,"NA","5' UTR (NM_028794, exon 1 of 8)","5' UTR (NM_028794, exon 1 of 8)",137,"NM_028794",74167,"Mm.241484","NM_028794","ENSMUSG00000029310","Nudt9","1190002C07Rik|ADPR-PPase|AI462474","nudix (nucleoside diphosphate linked moiety X)-type motif 9","protein-coding"]
[538,"chr10",13192039,13193396,"+",0,"NA","intron (NM_181470, intron 1 of 10)","intron (NM_181470, intron 1 of 10)",420,"NM_181470",353258,"Mm.117581","NM_181470","ENSMUSG00000019814","Ltv1","2610020N02Rik","LTV1 homolog (S. cerevisiae)","protein-coding"]
[5897,"chr4",135986073,135987668,"+",0,"NA","intron (NM_025411, intron 1 of 5)","intron (NM_025411, intron 1 of 5)",374,"NM_025411",66193,"Mm.29131","NM_025411","ENSMUSG00000028669","Pithd1","1110049F12Rik|AA408179|Trp26","PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1","protein-coding"]
[8664,"chr9",108506240,108509301,"+",0,"NA","promoter-TSS (NM_133794)","promoter-TSS (NM_133794)",-235,"NM_133794",97541,"Mm.272427","NM_133794","ENSMUSG00000032604","Qars","1110018N24Rik|1200016L19Rik|C80286|GLNRS","glutaminyl-tRNA synthetase","protein-coding"]
[4711,"chr2",120969559,120971090,"+",0,"NA","intron (NM_009461, intron 1 of 46)","intron (NM_009461, intron 1 of 46)",391,"NM_009461",22222,"Mm.389330","NM_009461","ENSMUSG00000027272","Ubr1","AI504731","ubiquitin protein ligase E3 component n-recognin 1","protein-coding"]
[521,"chr10",7210987,7213161,"+",0,"NA","5' UTR (NM_172546, exon 1 of 13)","5' UTR (NM_172546, exon 1 of 13)",163,"NM_172546",215748,"Mm.37984","NM_172546","ENSMUSG00000015202","Cnksr3","6820402C05|BC024086|Magi1","Cnksr family member 3","protein-coding"]
[6353,"chr5",114942253,114942830,"+",0,"NA","intron (NM_028211, intron 1 of 5)","intron (NM_028211, intron 1 of 5)",339,"NM_028211",72357,"Mm.292672","NM_028211",null,"2210016L21Rik","-","RIKEN cDNA 2210016L21 gene","protein-coding"]
[2164,"chr13",55692797,55693723,"+",0,"NA","5' UTR (NM_181278, exon 1 of 2)","5' UTR (NM_181278, exon 1 of 2)",136,"NM_181278",78521,"Mm.28449","NM_181278","ENSMUSG00000045767","B230219D22Rik","AA119856|D530037I19Rik","RIKEN cDNA B230219D22 gene","protein-coding"]
[1912,"chr12",87147227,87148202,"+",0,"NA","promoter-TSS (NM_010363)","promoter-TSS (NM_010363)",7,"NM_010363",14874,"Mm.29652","NM_010363","ENSMUSG00000021033","Gstz1","MAAI","glutathione transferase zeta 1 (maleylacetoacetate isomerase)","protein-coding"]
[3293,"chr17",8165274,8165844,"+",0,"NA","promoter-TSS (NM_201230)","promoter-TSS (NM_201230)",41,"NM_201230",75296,"Mm.227250","NM_201230","ENSMUSG00000069135","Fgfr1op","4930553O10Rik|FOP","Fgfr1 oncogene partner","protein-coding"]
[986,"chr11",6402036,6402676,"+",0,"NA","TTS (NR_106109)","TTS (NR_106109)",726,"NR_106109",102465759,null,"NR_106109","ENSMUSG00000098516","Mir7651","Gm27664|mmu-mir-7651","microRNA 7651","ncRNA"]
[786,"chr10",81544643,81545756,"+",0,"NA","promoter-TSS (NM_010301)","promoter-TSS (NM_010301)",-153,"NM_010301",14672,"Mm.260925","NM_010301","ENSMUSG00000034781","Gna11","Dsk7|E430025L19","guanine nucleotide binding protein, alpha 11","protein-coding"]
[4148,"chr19",21778349,21779048,"+",0,"NA","5' UTR (NM_031997, exon 1 of 25)","5' UTR (NM_031997, exon 1 of 25)",358,"NM_031997",83921,"Mm.329776","NM_031997","ENSMUSG00000024754","Tmem2","-","transmembrane protein 2","protein-coding"]
[4082,"chr19",7217206,7218132,"+",0,"NA","promoter-TSS (NM_007750)","promoter-TSS (NM_007750)",-53,"NM_007750",12868,"Mm.14022","NM_007750","ENSMUSG00000035885","Cox8a","COX8L","cytochrome c oxidase subunit VIIIa","protein-coding"]
[201,"chr1",84936652,84937209,"+",0,"NA","Intergenic","Intergenic",-1847,"NM_027921",71781,"Mm.158754","NM_027921","ENSMUSG00000026220","Slc16a14","1110004H10Rik","solute carrier family 16 (monocarboxylic acid transporters), member 14","protein-coding"]
[6742,"chr6",52164272,52165801,"+",0,"NA","promoter-TSS (NM_010451)","promoter-TSS (NM_010451)",-205,"NM_010451",15399,"Mm.131","NM_010451","ENSMUSG00000014704","Hoxa2","AI324701|HOX1.11|Hox-1.11","homeobox A2","protein-coding"]
[719,"chr10",78425126,78429858,"+",0,"NA","3' UTR (NM_007793, exon 3 of 3)","3' UTR (NM_007793, exon 3 of 3)",1822,"NM_007793",13014,"Mm.6095","NM_007793","ENSMUSG00000005054","Cstb","AA960480|Stfb","cystatin B","protein-coding"]
[4645,"chr2",105016439,105017536,"+",0,"NA","promoter-TSS (NM_145380)","promoter-TSS (NM_145380)",40,"NM_145380",98221,"Mm.379278","NM_145380","ENSMUSG00000027170","Eif3m","Ga17|Pcid1|Tango7","eukaryotic translation initiation factor 3, subunit M","protein-coding"]
[1529,"chr11",102284266,102285600,"+",0,"NA","promoter-TSS (NM_028076)","promoter-TSS (NM_028076)",-6,"NM_028076",72053,"Mm.101274","NM_028076","ENSMUSG00000034757","Tmub2","2010008E23Rik","transmembrane and ubiquitin-like domain containing 2","protein-coding"]
[7451,"chr7",98162613,98165787,"+",0,"NA","intron (NM_007602, intron 1 of 12)","intron (NM_007602, intron 1 of 12)",-1858,"NM_001301250",12337,"Mm.326847","NM_007602","ENSMUSG00000035547","Capn5","nCL-3","calpain 5","protein-coding"]
[1353,"chr11",83460965,83463727,"+",0,"NA","intron (NM_172797, intron 1 of 7)","intron (NM_172797, intron 1 of 7)",615,"NM_172797",118453,"Mm.264648","NM_080453","ENSMUSG00000020682","Mmp28","D130023P12","matrix metallopeptidase 28 (epilysin)","protein-coding"]
[1742,"chr12",24571447,24575180,"+",0,"NA","intron (NM_001161406, intron 1 of 15)","intron (NM_001161406, intron 1 of 15)",1026,"NM_001161406",195733,"Mm.263068","NM_145890","ENSMUSG00000020656","Grhl1","LBP-32|MGR|Tcfcp2l2","grainyhead-like 1 (Drosophila)","protein-coding"]
[2585,"chr14",76413883,76415642,"+",0,"NA","promoter-TSS (NM_001310646)","promoter-TSS (NM_001310646)",-199,"NM_001310646",21807,"Mm.153272","NM_009366","ENSMUSG00000022010","Tsc22d1","AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22","TSC22 domain family, member 1","protein-coding"]
[4404,"chr2",26963401,26965126,"+",0,"NA","exon (NM_207234, exon 1 of 8)","exon (NM_207234, exon 1 of 8)",123,"NM_207234",227656,"Mm.291874","NM_207234","ENSMUSG00000052406","Rexo4","Gm111|Xpmc2h","REX4, RNA exonuclease 4 homolog (S. cerevisiae)","protein-coding"]
[4864,"chr2",155236176,155237209,"+",0,"NA","promoter-TSS (NM_001291108)","promoter-TSS (NM_001291108)",84,"NM_001291108",67068,"Mm.23693","NM_025947","ENSMUSG00000047459","Dynlrb1","2010012N15Rik|2010320M17Rik|9430076K19Rik|AV124457|DNLC2A|Dncl2a|km23-1","dynein light chain roadblock-type 1","protein-coding"]
[6671,"chr6",30693376,30693712,"+",0,"NA","intron (NR_130775, intron 1 of 2)","CpG",205,"NM_031998",83922,"Mm.65389","NM_031998","ENSMUSG00000029790","Cep41","1700017E11Rik|2810431D15Rik|Tsga14","centrosomal protein 41","protein-coding"]
[6773,"chr6",66896072,66897921,"+",0,"NA","intron (NM_001177558, intron 1 of 4)","intron (NM_001177558, intron 1 of 4)",105,"NM_001177558",14701,"Mm.234342","NM_025278","ENSMUSG00000036402","Gng12","2010305F15Rik|AA536815|AI115529|AI314170|AI842738","guanine nucleotide binding protein (G protein), gamma 12","protein-coding"]
[6562,"chr5",142462159,142464671,"+",0,"NA","promoter-TSS (NM_172725)","promoter-TSS (NM_172725)",-516,"NM_172725",231855,"Mm.78250","NM_172725","ENSMUSG00000039623","Ap5z1","C330006K01Rik","adaptor-related protein complex 5, zeta 1 subunit","protein-coding"]
[7716,"chr7",143501542,143502772,"+",0,"NA","exon (NM_009434, exon 1 of 2)","exon (NM_009434, exon 1 of 2)",367,"NM_009434",22113,"Mm.334344","NM_009434","ENSMUSG00000010760","Phlda2","Ipl|Tssc3","pleckstrin homology-like domain, family A, member 2","protein-coding"]
[97,"chr1",53313099,53314067,"+",0,"NA","promoter-TSS (NM_001285839)","promoter-TSS (NM_001285839)",-41,"NR_104361",72085,"Mm.482256","NM_028091","ENSMUSG00000026096","Osgepl1","2610001M19Rik|AA416452","O-sialoglycoprotein endopeptidase-like 1","protein-coding"]
[3645,"chr17",56583647,56586501,"+",0,"NA","promoter-TSS (NM_001029979)","promoter-TSS (NM_001029979)",92,"NM_001163300",224903,"Mm.255066","NM_001163300","ENSMUSG00000071054","Safb","3110021E02Rik|5330423C17Rik|AU018122|D18386|E130307D12|HAP|HET|SAF-B1|SAFB1","scaffold attachment factor B","protein-coding"]
[7776,"chr8",21776111,21777788,"+",0,"NA","intron (NM_007843, intron 1 of 1)","intron (NM_007843, intron 1 of 1)",394,"NM_007843",13214,"Mm.431316","NM_007843","ENSMUSG00000044748","Defb1","AW260221|BD-1","defensin beta 1","protein-coding"]
[8260,"chr9",15357179,15358216,"+",0,"NA","promoter-TSS (NM_176976)","promoter-TSS (NM_176976)",91,"NM_176976",319675,"Mm.218317","NM_176976","ENSMUSG00000046111","Cep295","5830418K08Rik|5832426L23Rik|Gm1131|Kiaa1731","centrosomal protein 295","protein-coding"]
[774,"chr10",81167221,81169877,"+",0,"NA","promoter-TSS (NM_021501)","promoter-TSS (NM_021501)",-829,"NM_021501",59004,"Mm.34428","NM_021501",null,"Pias4","PIASY|Pias-gamma|Piasg","protein inhibitor of activated STAT 4","protein-coding"]
[5101,"chr3",65658605,65659854,"+",0,"NA","promoter-TSS (NR_106200)","promoter-TSS (NR_106200)",-59,"NR_106200",102465905,null,"NR_106200","ENSMUSG00000098944","Mir8120","Gm27637|mmu-mir-8120","microRNA 8120","ncRNA"]
[5602,"chr4",86575186,86576712,"+",0,"NA","exon (NM_178376, exon 1 of 1)","exon (NM_178376, exon 1 of 1)",276,"NM_178376",68441,"Mm.31178","NM_178376","ENSMUSG00000070934","Rraga","1300010C19Rik|AI255374|FIP-1|RAGA","Ras-related GTP binding A","protein-coding"]
[4306,"chr19",61140287,61141310,"+",0,"NA","promoter-TSS (NM_001309216)","promoter-TSS (NM_001309216)",42,"NR_131956",414758,"Mm.100056","NM_001001737","ENSMUSG00000074733","Zfp950","5830428H23Rik|AU016073|BC055757|Gm34518|Zfp826|mszf84","zinc finger protein 950","protein-coding"]
[6224,"chr5",73254837,73257966,"+",0,"NA","5' UTR (NM_028194, exon 1 of 63)","5' UTR (NM_028194, exon 1 of 63)",217,"NM_028194",72313,"Mm.260594","NM_028194","ENSMUSG00000070733","Fryl","2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826","furry homolog-like (Drosophila)","protein-coding"]
[1341,"chr11",80382759,80384789,"+",0,"NA","intron (NR_045038, intron 1 of 16)","intron (NR_045038, intron 1 of 16)",495,"NM_001130171",22680,"Mm.401332","NM_011751","ENSMUSG00000017421","Zfp207","8430401D15Rik|BuGZ|Zep|Znf207","zinc finger protein 207","protein-coding"]
[2684,"chr15",35371077,35372210,"+",0,"NA","promoter-TSS (NM_177151)","promoter-TSS (NM_177151)",97,"NM_177151",666173,"Mm.309250","NM_177151","ENSMUSG00000037646","Vps13b","1810042B05Rik|2310042E16Rik|4732488H20|C330002D13Rik|C87206|Coh1|D230005K13|mKIAA0532|mKIAA5032","vacuolar protein sorting 13B (yeast)","protein-coding"]
[4123,"chr19",10879789,10882284,"+",0,"NA","intron (NM_134142, intron 1 of 3)","intron (NM_134142, intron 1 of 3)",707,"NM_134142",68539,"Mm.251890","NM_134142","ENSMUSG00000034659","Tmem109","1110006I15Rik|AA958958|C77652","transmembrane protein 109","protein-coding"]
[5098,"chr3",63976203,63976754,"+",0,"NA","intron (NM_001033300, intron 1 of 15)","CpG",335,"NM_001033300",229363,"Mm.331051","NM_001033300","ENSMUSG00000027823","Gmps","AA591640|AI047208","guanine monophosphate synthetase","protein-coding"]
[6929,"chr6",120036162,120040065,"+",0,"NA","5' UTR (NM_001185020, exon 1 of 26)","5' UTR (NM_001185020, exon 1 of 26)",542,"NM_001199083",232341,"Mm.333349","NM_198703","ENSMUSG00000045962","Wnk1","6430573H23Rik|EG406236|Hsn2|Prkwnk1|mKIAA0344","WNK lysine deficient protein kinase 1","protein-coding"]
[8653,"chr9",108078814,108081314,"+",0,"NA","promoter-TSS (NM_032543)","promoter-TSS (NM_032543)",-372,"NM_008243",15235,"Mm.8369","NM_008243","ENSMUSG00000032591","Mst1","D3F15S2h|D9H3F15S2|DNF15S2h|Hgfl","macrophage stimulating 1 (hepatocyte growth factor-like)","protein-coding"]
[3424,"chr17",28231127,28234437,"+",0,"NA","promoter-TSS (NM_011145)","promoter-TSS (NM_011145)",28,"NM_011145",19015,"Mm.328914","NM_011145","ENSMUSG00000002250","Ppard","NUC-1|NUC1|Nr1c2|PPAR-beta|PPAR-delta|PPAR[b]|PPARdelta|Pparb|Pparb/d","peroxisome proliferator activator receptor delta","protein-coding"]
[4799,"chr2",143063109,143063592,"+",0,"NA","intron (NM_021335, intron 1 of 6)","intron (NM_021335, intron 1 of 6)",281,"NM_021335",20639,"Mm.1323","NM_021335",null,"Snrpb2","2810052G09Rik","U2 small nuclear ribonucleoprotein B","protein-coding"]
[8969,"chrX",162829068,162829341,"+",0,"NA","intron (NM_001290776, intron 1 of 10)","CpG",250,"NM_001290776",353170,"Mm.270186","NM_178935","ENSMUSG00000038344","Txlng","4932441K18Rik|Fiat|Lrp","taxilin gamma","protein-coding"]
[893,"chr10",123196087,123197586,"+",0,"NA","exon (NM_027604, exon 1 of 22)","exon (NM_027604, exon 1 of 22)",183,"NM_027604",14479,"Mm.244209","NM_027604",null,"Usp15","4921514G19Rik|AI327321|E430033I05Rik|Gcap18","ubiquitin specific peptidase 15","protein-coding"]
[6414,"chr5",122643989,122644389,"+",0,"NA","exon (NM_001038887, exon 1 of 4)","exon (NM_001038887, exon 1 of 4)",278,"NM_001038887",18439,"Mm.42026","NM_011027","ENSMUSG00000029468","P2rx7","AI467586|P2X(7)|P2X7R","purinergic receptor P2X, ligand-gated ion channel, 7","protein-coding"]
[8766,"chrX",7789167,7790290,"+",0,"NA","promoter-TSS (NM_001290455)","promoter-TSS (NM_001290455)",-265,"NM_001290455",54645,"Mm.194811","NM_207670","ENSMUSG00000031153","Gripap1","AI854681|DXImx47e|GRASP-1|Sfc10|mKIAA1167","GRIP1 associated protein 1","protein-coding"]
[3979,"chr19",3282472,3283502,"+",0,"NA","promoter-TSS (NM_009212)","promoter-TSS (NM_009212)",23,"NM_009212",20589,"Mm.3179","NM_009212",null,"Ighmbp2","AEP|Catf1|RIPE3b1|Smbp-2|Smbp2|Smubp2|nmd|sma","immunoglobulin mu binding protein 2","protein-coding"]
[6714,"chr6",42395534,42401470,"+",0,"NA","Intergenic","Lx8|LINE|L1",-1736,"NM_001001452",387514,"Mm.377921","NM_001001452","ENSMUSG00000046652","Tas2r143","Gm1404|Tas2r43|mt2r36","taste receptor, type 2, member 143","protein-coding"]
[3959,"chr18",77793985,77797715,"+",0,"NA","intron (NM_013831, intron 1 of 14)","PB1D7|SINE|Alu",1300,"NM_013831",19201,"Mm.57174","NM_013831",null,"Pstpip2","MAYP|cmo","proline-serine-threonine phosphatase-interacting protein 2","protein-coding"]
[6047,"chr5",3595536,3596583,"+",0,"NA","promoter-TSS (NM_027777)","promoter-TSS (NM_027777)",-7,"NM_027777",71382,"Mm.379196","NM_027777","ENSMUSG00000005907","Pex1","5430414H02Rik|E330005K07Rik|ZWS1","peroxisomal biogenesis factor 1","protein-coding"]
[5210,"chr3",93519526,93524420,"+",0,"NA","intron (NM_016740, intron 1 of 2)","intron (NM_016740, intron 1 of 2)",1477,"NM_016740",20195,"Mm.280038","NM_016740","ENSMUSG00000027907","S100a11","EMAPI|Emap1|S100a14|S100c|cal","S100 calcium binding protein A11","protein-coding"]
[755,"chr10",80319804,80320871,"+",0,"NA","TTS (NM_008793)","TTS (NM_008793)",211,"NM_025521",66374,"Mm.383824","NM_025521","ENSMUSG00000020133","2310011J03Rik","AI452186|AW545358","RIKEN cDNA 2310011J03 gene","protein-coding"]
[7976,"chr8",82773242,82774904,"+",0,"NA","promoter-TSS (NM_145600)","promoter-TSS (NM_145600)",53,"NM_145600",30932,"Mm.269248","NM_145600","ENSMUSG00000031711","Zfp330","BC008086|Noa36|Znf330","zinc finger protein 330","protein-coding"]
[3942,"chr18",73753897,73754682,"+",0,"NA","intron (NM_053255, intron 1 of 3)","CpG",190,"NM_053255",114615,"Mm.50642","NM_053255","ENSMUSG00000036941","Elac1","2610018O07Rik|8430417G19Rik","elaC homolog 1 (E. coli)","protein-coding"]
[8631,"chr9",106891409,106892910,"+",0,"NA","promoter-TSS (NM_029103)","promoter-TSS (NM_029103)",-221,"NM_029103",74840,"Mm.29778","NM_029103","ENSMUSG00000032575","Manf","3230402M22Rik|AA407711|AA408789|AA673178|Armet|D17914|D18Mgi17","mesencephalic astrocyte-derived neurotrophic factor","protein-coding"]
[5394,"chr3",144717833,144721374,"+",0,"NA","intron (NM_001282037, intron 1 of 10)","intron (NM_001282037, intron 1 of 10)",732,"NM_001282042",54673,"Mm.271775","NM_019464","ENSMUSG00000037062","Sh3glb1","AA409932|AI314629|AU015566|Bif-1|mKIAA0491","SH3-domain GRB2-like B1 (endophilin)","protein-coding"]
[8075,"chr8",104250784,104251516,"+",0,"NA","intron (NM_029295, intron 1 of 3)","CpG",289,"NM_001286383",75458,"Mm.269219","NM_029295","ENSMUSG00000054400","Cklf","1700001C14Rik|1810018M11Rik|C32|CKLF1|CKLF3|CKLF4|CKLF5|Cklf2|Cklf6|HSPC224|UCK-1","chemokine-like factor","protein-coding"]
[7545,"chr7",116503341,116504718,"+",0,"NA","promoter-TSS (NM_001130479)","promoter-TSS (NM_001130479)",-340,"NM_001130479",53322,"Mm.9901","NM_016773","ENSMUSG00000030659","Nucb2","AI607786|Calnuc|Nefa|Nesfatin-1","nucleobindin 2","protein-coding"]
[2268,"chr13",95523620,95526046,"+",0,"NA","intron (NM_007974, intron 1 of 1)","CpG",407,"NM_007974",14063,"Mm.1614","NM_007974","ENSMUSG00000021678","F2rl1","Gpcr11|PAR-2|Par2","coagulation factor II (thrombin) receptor-like 1","protein-coding"]
[6409,"chr5",122353871,122354839,"+",0,"NA","promoter-TSS (NM_144912)","promoter-TSS (NM_144912)",-58,"NM_019780",56433,"Mm.216528","NM_019780","ENSMUSG00000029462","Vps29","2010015D08Rik|AW049835|PEP11","vacuolar protein sorting 29 (S. pombe)","protein-coding"]
[6448,"chr5",124861840,124863564,"+",0,"NA","promoter-TSS (NM_001081750)","promoter-TSS (NM_001081750)",-3,"NM_001081750",269704,"Mm.138617","NM_001081750","ENSMUSG00000079215","Zfp664","AW060232|D930038J03Rik|ZFOC1|Znf664","zinc finger protein 664","protein-coding"]
[6379,"chr5",117356351,117358676,"+",0,"NA","intron (NM_021539, intron 1 of 8)","CpG",208,"NM_021539",59043,"Mm.28489","NM_021539","ENSMUSG00000029364","Wsb2","AA673511|Swip2|WSB-2","WD repeat and SOCS box-containing 2","protein-coding"]
[5746,"chr4",120665907,120667987,"+",0,"NA","exon (NM_019563, exon 1 of 1)","exon (NM_019563, exon 1 of 1)",384,"NM_019563",56222,"Mm.272646","NM_019563","ENSMUSG00000070803","Cited4","MRG-2|Mrg2","Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4","protein-coding"]
[7244,"chr7",31150564,31152095,"+",0,"NA","promoter-TSS (NM_027898)","promoter-TSS (NM_027898)",-279,"NM_027898",52857,"Mm.27366","NM_027898","ENSMUSG00000001248","Gramd1a","1300003M23Rik|AI415002|AW547240|D7Bwg0611e","GRAM domain containing 1A","protein-coding"]
[8740,"chr9",122865440,122865989,"+",0,"NA","intron (NM_173364, intron 1 of 6)","intron (NM_173364, intron 1 of 6)",292,"NM_173364",235682,"Mm.326477","NM_173364",null,"Zfp445","AW610627|ZNF168|Znf445|mszf29|mszf50","zinc finger protein 445","protein-coding"]
[411,"chr1",171222783,171223481,"+",0,"NA","promoter-TSS (NM_001037170)","promoter-TSS (NM_001037170)",-618,"NM_001037170",641376,"Mm.288374","NM_001037170","ENSMUSG00000005674","Tomm40l","-","translocase of outer mitochondrial membrane 40 homolog-like (yeast)","protein-coding"]
[6583,"chr5",144254060,144256560,"+",0,"NA","promoter-TSS (NM_018772)","promoter-TSS (NM_018772)",85,"NM_018772",55950,"Mm.38011","NM_018772","ENSMUSG00000047843","Bri3","I3","brain protein I3","protein-coding"]
[6370,"chr5",115631384,115631727,"+",0,"NA","promoter-TSS (NM_198163)","promoter-TSS (NM_198163)",261,"NR_027810",66123,"Mm.133063","NM_021417","ENSMUSG00000107121","1110006O24Rik","-","RIKEN cDNA 1110006O24 gene","ncRNA"]
[2016,"chr13",12565180,12566288,"+",0,"NA","promoter-TSS (NM_026184)","promoter-TSS (NM_026184)",-149,"NM_026184",67475,"Mm.358706","NM_026184","ENSMUSG00000057069","Ero1lb","1300013B24Rik|1700065B09Rik|AI447560|ero1-beta","ERO1-like beta (S. cerevisiae)","protein-coding"]
[942,"chr10",128804040,128806478,"+",0,"NA","promoter-TSS (NM_178066)","promoter-TSS (NM_178066)",-417,"NM_028873",74330,"Mm.296915","NM_028873","ENSMUSG00000025354","Dnajc14","5730551F12Rik|DNAJ|DRIP78|HDJ3|LIP6","DnaJ (Hsp40) homolog, subfamily C, member 14","protein-coding"]
[1376,"chr11",86756506,86760416,"+",0,"NA","promoter-TSS (NM_001003908)","promoter-TSS (NM_001003908)",-969,"NM_001003908",67300,"Mm.254588","NM_001003908","ENSMUSG00000047126","Cltc","3110065L21Rik|CHC|R74732","clathrin, heavy polypeptide (Hc)","protein-coding"]
[6634,"chr6",8258426,8259952,"+",0,"NA","promoter-TSS (NM_026632)","promoter-TSS (NM_026632)",-48,"NM_026632",68240,"Mm.29073","NM_026632","ENSMUSG00000012483","Rpa3","14kDa|C330026P08Rik","replication protein A3","protein-coding"]
[6270,"chr5",93205293,93206743,"+",0,"NA","promoter-TSS (NM_029363)","promoter-TSS (NM_029363)",477,"NM_017367",12453,"Mm.250419","NM_017367","ENSMUSG00000063015","Ccni","-","cyclin I","protein-coding"]
[2369,"chr14",21747468,21751421,"+",0,"NA","promoter-TSS (NM_001007268)","promoter-TSS (NM_001007268)",-822,"NM_001007268",27389,"Mm.390674","NM_013849","ENSMUSG00000021768","Dusp13","DUSP13A|DUSP13B|Gm1203|LMW-DSP6|MDSP|TMDP|TS-DSP6","dual specificity phosphatase 13","protein-coding"]
[7482,"chr7",101836641,101838283,"+",0,"NA","intron (NM_010567, intron 1 of 28)","intron (NM_010567, intron 1 of 28)",362,"NM_001122739",16332,"Mm.476000","NM_010567","ENSMUSG00000032737","Inppl1","51C|SHIP2","inositol polyphosphate phosphatase-like 1","protein-coding"]
[2816,"chr15",79075021,79075807,"+",0,"NA","intron (NM_145139, intron 1 of 12)","CpG",191,"NM_145139",223691,"Mm.206404","NM_145139","ENSMUSG00000033047","Eif3l","0610011H21Rik|D15N1e|Eif3eip|Eif3ip|Eif3s6ip|HSP-66Y|PAF67","eukaryotic translation initiation factor 3, subunit L","protein-coding"]
[2802,"chr15",77756668,77756855,"+",0,"NA","Intergenic","Intergenic",-1532,"NM_001081970",239552,"Mm.125650","NM_001081970","ENSMUSG00000056656","Apol8","9830006J20Rik|APOL-II|Apol2","apolipoprotein L 8","protein-coding"]
[231,"chr1",91458098,91459906,"+",0,"NA","intron (NM_011066, intron 1 of 22)","CpG",326,"NM_011066",18627,"Mm.482463","NM_011066","ENSMUSG00000055866","Per2","mKIAA0347|mPer2","period circadian clock 2","protein-coding"]
[6102,"chr5",30073122,30073344,"+",0,"NA","intron (NR_033402, intron 1 of 6)","CpG",392,"NR_033402",22171,"Mm.268395","NM_021288","ENSMUSG00000025747","Tyms","Ts","thymidylate synthase","protein-coding"]
[551,"chr10",18406920,18407948,"+",0,"NA","promoter-TSS (NM_173390)","promoter-TSS (NM_173390)",-241,"NM_173390",215819,"Mm.297971","NM_173390","ENSMUSG00000039835","Nhsl1","5730409E15Rik|A630035H13Rik|A730096F01|BC013565|D10Bwg0940e|mKIAA1357","NHS-like 1","protein-coding"]
[4700,"chr2",119896895,119898338,"+",0,"NA","intron (NM_001164274, intron 1 of 22)","CpG",388,"NM_013720",29808,"Mm.87532","NM_013720","ENSMUSG00000033943","Mga","AV312082|C130042M01Rik|C80739|D030062C11Rik|Mad5","MAX gene associated","protein-coding"]
[4720,"chr2",121441933,121443480,"+",0,"NA","promoter-TSS (NM_145973)","promoter-TSS (NM_145973)",-105,"NM_145973",269344,"Mm.330522","NM_145973","ENSMUSG00000027246","Ell3","A930015D22Rik","elongation factor RNA polymerase II-like 3","protein-coding"]
[5926,"chr4",139351983,139353109,"+",0,"NA","promoter-TSS (NM_001039200)","promoter-TSS (NM_001039200)",30,"NM_001290810",69902,"Mm.27871","NM_023536","ENSMUSG00000028741","Mrto4","2610012O22Rik|Mg684|Mrt4","mRNA turnover 4, homolog (S. cerevisiae)","protein-coding"]
[7365,"chr7",67644912,67648032,"+",0,"NA","promoter-TSS (NM_001168476)","promoter-TSS (NM_001168476)",-938,"NM_001168476",67009,"Mm.249356","NM_025905","ENSMUSG00000030555","Ttc23","1600012K10Rik","tetratricopeptide repeat domain 23","protein-coding"]
[3753,"chr18",6489511,6491532,"+",0,"NA","TTS (NR_035446)","TTS (NR_035446)",125,"NR_035446",100316773,null,"NR_035446","ENSMUSG00000084514","Mir1893","Mirn1893|mmu-mir-1893","microRNA 1893","ncRNA"]
[2823,"chr15",79441179,79442716,"+",0,"NA","promoter-TSS (NM_001289899)","promoter-TSS (NM_001289899)",110,"NM_001289898",27373,"Mm.30199","NM_013767","ENSMUSG00000022433","Csnk1e","AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau","casein kinase 1, epsilon","protein-coding"]
[6647,"chr6",17637173,17638318,"+",0,"NA","intron (NM_007604, intron 1 of 9)","intron (NM_007604, intron 1 of 9)",647,"NM_007604",12343,"Mm.392504","NM_007604",null,"Capza2","1110053K06Rik|AW208808|Cappa2","capping protein (actin filament) muscle Z-line, alpha 2","protein-coding"]
[3894,"chr18",57354251,57355587,"+",0,"NA","intron (NM_028447, intron 1 of 8)","CpG",186,"NM_028447",73137,"Mm.29889","NM_028447","ENSMUSG00000024594","Prrc1","1190002C06Rik|2310058D16Rik|3110038B19Rik|9430085A19Rik","proline-rich coiled-coil 1","protein-coding"]
[8813,"chrX",37126836,37127473,"+",0,"NA","exon (NM_025937, exon 1 of 9)","exon (NM_025937, exon 1 of 9)",391,"NM_025937",67050,"Mm.55422","NM_025937","ENSMUSG00000016409","Nkap","2610020O08Rik|AA987160|AI849147|AL024236","NFKB activating protein","protein-coding"]
[4583,"chr2",84424739,84425645,"+",0,"NA","promoter-TSS (NM_018782)","promoter-TSS (NM_018782)",74,"NM_018782",54598,"Mm.75467","NM_018782","ENSMUSG00000059588","Calcrl","AV071593|CRLR","calcitonin receptor-like","protein-coding"]
[7302,"chr7",45153429,45155348,"+",0,"NA","promoter-TSS (NM_001278207)","promoter-TSS (NM_001278207)",85,"NM_001278207",68845,"Mm.181689","NM_029406","ENSMUSG00000003423","Pih1d1","1110061L23Rik|4933413A04Rik|Nop17","PIH1 domain containing 1","protein-coding"]
[6995,"chr6",135011654,135012264,"+",0,"NA","intron (NM_026360, intron 1 of 11)","intron (NM_026360, intron 1 of 11)",347,"NM_026360",67755,"Mm.166524","NM_026360","ENSMUSG00000030204","Ddx47","4930588A18Rik|C77285","DEAD (Asp-Glu-Ala-Asp) box polypeptide 47","protein-coding"]
[1782,"chr12",51970811,51971827,"+",0,"NA","promoter-TSS (NM_177171)","promoter-TSS (NM_177171)",2,"NM_177171",320487,"Mm.131941","NM_177171","ENSMUSG00000035181","Heatr5a","C230081H03Rik|D930036F22Rik|mKIAA1316","HEAT repeat containing 5A","protein-coding"]
[7578,"chr7",126199807,126200844,"+",0,"NA","promoter-TSS (NM_028816)","promoter-TSS (NM_028816)",83,"NM_028816",74204,"Mm.235663","NM_028816","ENSMUSG00000000131","Xpo6","2610005L19Rik|AL022631|C230091E20Rik|R75304|Ranbp20|mKIAA0370","exportin 6","protein-coding"]
[2698,"chr15",39112040,39113387,"+",0,"NA","promoter-TSS (NM_172402)","promoter-TSS (NM_172402)",3,"NM_172402",69906,"Mm.17875","NM_172402","ENSMUSG00000022299","Slc25a32","2610043O12Rik|Mftc","solute carrier family 25, member 32","protein-coding"]
[3403,"chr17",26780996,26781941,"+",0,"NA","intron (NM_172149, intron 1 of 5)","intron (NM_172149, intron 1 of 5)",389,"NM_172149",224630,"Mm.21795","NM_172149","ENSMUSG00000024191","Bnip1","2010005M06Rik|5930429G21Rik|Sec20","BCL2/adenovirus E1B interacting protein 1","protein-coding"]
[792,"chr10",82629165,82630616,"+",0,"NA","promoter-TSS (NM_172552)","promoter-TSS (NM_172552)",48,"NR_037190",624784,"Mm.284252","NR_037190",null,"Gm9855","ENSMUSG00000051559","thymine DNA glycosylase pseudogene","pseudo"]
[6231,"chr5",74531351,74532328,"+",0,"NA","promoter-TSS (NM_178672)","promoter-TSS (NM_178672)",-97,"NM_001114660",212986,"Mm.134147","NM_178672","ENSMUSG00000062110","Scfd2","E430013M20Rik|STXBP1L1","Sec1 family domain containing 2","protein-coding"]
[1248,"chr11",70539315,70541593,"+",0,"NA","5' UTR (NM_008876, exon 1 of 25)","5' UTR (NM_008876, exon 1 of 25)",182,"NM_001302476",18806,"Mm.260177","NM_008876","ENSMUSG00000020828","Pld2","PLD1C","phospholipase D2","protein-coding"]
[6368,"chr5",115559487,115560526,"+",0,"NA","intron (NM_007475, intron 2 of 6)","CpG-11412",539,"NM_007475",11837,"Mm.5286","NM_007475","ENSMUSG00000067274","Rplp0","36B4|Arbp|L10E","ribosomal protein, large, P0","protein-coding"]
[4727,"chr2",122233961,122235239,"+",0,"NA","promoter-TSS (NM_146126)","promoter-TSS (NM_146126)",-239,"NM_146126",20322,"Mm.371580","NM_146126","ENSMUSG00000027227","Sord","Sdh-1|Sdh1|Sodh-1","sorbitol dehydrogenase","protein-coding"]
[5076,"chr3",53462852,53464165,"+",0,"NA","promoter-TSS (NM_172501)","promoter-TSS (NM_172501)",-250,"NM_172501",212114,"Mm.85744","NM_172501",null,"Nhlrc3","4833441N19|8030451K01Rik|mKIAA4083","NHL repeat containing 3","protein-coding"]
[4205,"chr19",40268507,40272029,"+",0,"NA","intron (NM_016861, intron 1 of 6)","intron (NM_016861, intron 1 of 6)",1348,"NM_016861",54132,"Mm.5567","NM_016861",null,"Pdlim1","CLP36|Clim1|mClim1","PDZ and LIM domain 1 (elfin)","protein-coding"]
[2462,"chr14",52304222,52305356,"+",0,"NA","intron (NM_019721, intron 1 of 10)","CpG",335,"NM_019721",56335,"Mm.271759","NM_019721","ENSMUSG00000022160","Mettl3","2310024F18Rik|M6A|Spo8","methyltransferase like 3","protein-coding"]
[924,"chr10",128269231,128271005,"+",0,"NA","promoter-TSS (NM_019963)","promoter-TSS (NM_019963)",-458,"NM_019963",20847,"Mm.293120","NM_019963","ENSMUSG00000040033","Stat2","1600010G07Rik|AW496480","signal transducer and activator of transcription 2","protein-coding"]
[5010,"chr3",8923114,8924410,"+",0,"NA","promoter-TSS (NM_025434)","promoter-TSS (NM_025434)",95,"NM_025434",66230,"Mm.38460","NM_025434","ENSMUSG00000040269","Mrps28","1500012D08Rik|AW061224","mitochondrial ribosomal protein S28","protein-coding"]
[4064,"chr19",6263263,6263734,"+",0,"NA","Intergenic","Intergenic",-1145,"NR_029830",723957,null,"NR_029830","ENSMUSG00000065582","Mir194-2","Mirn194-2|mir-194-2","microRNA 194-2","ncRNA"]
[2301,"chr13",104285414,104287783,"+",0,"NA","Intergenic","Intergenic",-1275,"NM_001081020",108154,"Mm.208125","NM_175496","ENSMUSG00000046169","Adamts6","5031426K13|A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo","a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6","protein-coding"]
[4162,"chr19",28963591,28964825,"+",0,"NA","promoter-TSS (NM_198651)","promoter-TSS (NM_198651)",-54,"NM_198651",381218,"Mm.280653","NM_198651","ENSMUSG00000064202","4430402I18Rik","AW122618|Spata6l","RIKEN cDNA 4430402I18 gene","protein-coding"]
[8815,"chrX",38189397,38190659,"+",0,"NA","5' UTR (NM_020256, exon 1 of 2)","5' UTR (NM_020256, exon 1 of 2)",235,"NM_001079513",56805,"Mm.391248","NM_020256","ENSMUSG00000048047","Zbtb33","AW260253|E130014G12Rik|Kaiso|Znf-kaiso","zinc finger and BTB domain containing 33","protein-coding"]
[2481,"chr14",55014351,55016065,"+",0,"NA","promoter-TSS (NM_026890)","promoter-TSS (NM_026890)",-246,"NM_026890",68966,"Mm.21214","NM_026890","ENSMUSG00000022204","Ngdn","1500001L15Rik|Ngd|neuroguidin","neuroguidin, EIF4E binding protein","protein-coding"]
[2027,"chr13",19395261,19396678,"+",0,"NA","promoter-TSS (NM_024270)","promoter-TSS (NM_024270)",-156,"NM_024270",76205,"Mm.41940","NM_024270","ENSMUSG00000003062","Stard3nl","0610035N01Rik|6530409L22Rik|AW124774|MENTHO","STARD3 N-terminal like","protein-coding"]
[4045,"chr19",5741728,5742618,"+",0,"NA","5' UTR (NM_008520, exon 2 of 28)","5' UTR (NM_008520, exon 2 of 28)",1269,"NM_008520",16998,"Mm.182396","NM_008520","ENSMUSG00000024940","Ltbp3","Ltbp2|mFLJ00070","latent transforming growth factor beta binding protein 3","protein-coding"]
[3922,"chr18",65800139,65801268,"+",0,"NA","exon (NM_025468, exon 1 of 6)","exon (NM_025468, exon 1 of 6)",125,"NM_025468",66286,"Mm.27800","NM_025468","ENSMUSG00000024516","Sec11c","1810029G24Rik|Sec11l3","SEC11 homolog C, signal peptidase complex subunit","protein-coding"]
[8204,"chr8",123100674,123104129,"+",0,"NA","promoter-TSS (NR_028128)","promoter-TSS (NR_028128)",51,"NM_016738",270106,"Mm.319719","NM_016738","ENSMUSG00000000740","Rpl13","A52|L13","ribosomal protein L13","protein-coding"]
[1366,"chr11",85138937,85142075,"+",0,"NA","promoter-TSS (NM_001029934)","promoter-TSS (NM_001029934)",-551,"NM_001029934",237898,"Mm.178524","NM_001029934","ENSMUSG00000000804","Usp32","2900074J03Rik|6430526O11Rik|AW045245","ubiquitin specific peptidase 32","protein-coding"]
[7797,"chr8",25600880,25603595,"+",0,"NA","promoter-TSS (NM_001001735)","promoter-TSS (NM_001001735)",-47,"NM_001001735",234135,"Mm.217337","NM_001001735","ENSMUSG00000054823","Whsc1l1","6720429E03|A530023P05|AI528490|NSD3|WHISTLE","Wolf-Hirschhorn syndrome candidate 1-like 1 (human)","protein-coding"]
[1255,"chr11",70982628,70982913,"+",0,"NA","exon (NM_007573, exon 1 of 6)","exon (NM_007573, exon 1 of 6)",256,"NM_007573",12261,"Mm.30049","NM_007573","ENSMUSG00000018446","C1qbp","AA407365|AA986492|D11Wsu182e|HABP1|P32|gC1qBP","complement component 1, q subcomponent binding protein","protein-coding"]
[2660,"chr15",12320568,12323136,"+",0,"NA","exon (NM_025673, exon 1 of 4)","exon (NM_025673, exon 1 of 4)",356,"NM_025673",66629,"Mm.157655","NM_025673","ENSMUSG00000022200","Golph3","4733401N08Rik|5730410D03Rik|AW413496","golgi phosphoprotein 3","protein-coding"]
[7264,"chr7",38107833,38108293,"+",0,"NA","promoter-TSS (NM_007633)","promoter-TSS (NM_007633)",-573,"NM_007633",12447,"Mm.16110","NM_007633","ENSMUSG00000002068","Ccne1","AW538188|CycE1","cyclin E1","protein-coding"]
[6916,"chr6",117900231,117901375,"+",0,"NA","intron (NM_001166432, intron 1 of 3)","intron (NM_001166432, intron 1 of 3)",463,"NM_001166432",98758,"Mm.422979","NM_133834","ENSMUSG00000042079","Hnrnpf","4833420I20Rik|AA407306|Hnrpf","heterogeneous nuclear ribonucleoprotein F","protein-coding"]
[6976,"chr6",128141762,128144434,"+",0,"NA","intron (NM_175414, intron 1 of 8)","intron (NM_175414, intron 1 of 8)",480,"NM_175414",109246,"Mm.21814","NM_175414","ENSMUSG00000030352","Tspan9","6720474K14Rik|9430079M16Rik|AU018597","tetraspanin 9","protein-coding"]
[3548,"chr17",35978883,35980928,"+",0,"NA","promoter-TSS (NM_008136)","promoter-TSS (NM_008136)",-50,"NM_008136",14670,"Mm.335754","NM_008136","ENSMUSG00000024429","Gnl1","Gna-rs1|Gnal1","guanine nucleotide binding protein-like 1","protein-coding"]
[5893,"chr4",135920432,135920958,"+",0,"NA","promoter-TSS (NM_024243)","promoter-TSS (NM_024243)",-31,"NM_024243",71665,"Mm.439940","NM_024243","ENSMUSG00000028673","Fuca1","0610006A03Rik|9530055J05Rik|Afuc|Fuca","fucosidase, alpha-L- 1, tissue","protein-coding"]
[3449,"chr17",31058106,31059360,"+",0,"NA","intron (NM_009593, intron 1 of 14)","intron (NM_009593, intron 1 of 14)",1039,"NM_009593",11307,"Mm.15691","NM_009593",null,"Abcg1","AW413978|Abc8|White","ATP-binding cassette, sub-family G (WHITE), member 1","protein-coding"]
[639,"chr10",57644793,57645033,"+",0,"NA","promoter-TSS (NM_001039053)","promoter-TSS (NM_001039053)",-956,"NM_001039052",18768,"Mm.262135","NM_008863","ENSMUSG00000019876","Pkib","Pkibeta|Prkacn2","protein kinase inhibitor beta, cAMP dependent, testis specific","protein-coding"]
[1505,"chr11",101095536,101095799,"+",0,"NA","promoter-TSS (NM_008949)","promoter-TSS (NM_008949)",-232,"NM_008949",19183,"Mm.18344","NM_008949",null,"Psmc3ip","C79099|GT198|HOP2|Tbpip","proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein","protein-coding"]
[4746,"chr2",127444650,127444929,"+",0,"NA","promoter-TSS (NM_029629)","promoter-TSS (NM_029629)",-224,"NM_029629",68126,"Mm.288676","NM_029629","ENSMUSG00000027371","Fahd2a","1500003K14Rik|B430104H02Rik|Cgi-105|Fahd2","fumarylacetoacetate hydrolase domain containing 2A","protein-coding"]
[2809,"chr15",78841370,78847079,"+",0,"NA","intron (NM_027219, intron 1 of 2)","intron (NM_027219, intron 1 of 2)",1577,"NM_027219",104445,"Mm.307488","NM_027219","ENSMUSG00000049521","Cdc42ep1","1810058K22Rik|AA980734|Borg5|CEP1|MSE55","CDC42 effector protein (Rho GTPase binding) 1","protein-coding"]
[4844,"chr2",152847550,152848611,"+",0,"NA","5' UTR (NM_001141976, exon 1 of 18)","5' UTR (NM_001141976, exon 1 of 18)",116,"NM_028109",72119,"Mm.407737","NM_028109","ENSMUSG00000027469","Tpx2","2610005B21Rik|DIL2|REPP86|p100","TPX2, microtubule-associated protein homolog (Xenopus laevis)","protein-coding"]
[1227,"chr11",69837398,69838935,"+",0,"NA","promoter-TSS (NM_026982)","promoter-TSS (NM_026982)",-359,"NM_026982",69186,"Mm.248772","NM_026982","ENSMUSG00000070394","Tmem256","1810027O10Rik|3110009M16Rik","transmembrane protein 256","protein-coding"]
[7766,"chr8",13757415,13758307,"+",0,"NA","intron (NM_027276, intron 1 of 17)","CpG",171,"NM_027276",69957,"Mm.182412","NM_027276","ENSMUSG00000038416","Cdc16","2700071J12Rik|2810431D22Rik|APC6","CDC16 cell division cycle 16","protein-coding"]
[7584,"chr7",126486815,126487592,"+",0,"NA","promoter-TSS (NM_001163713)","promoter-TSS (NM_001163713)",-152,"NM_172745",233870,"Mm.197829","NM_172745","ENSMUSG00000073838","Tufm","2300002G02Rik|C76308|C76389|EF-TuMT|EFTU","Tu translation elongation factor, mitochondrial","protein-coding"]
[3478,"chr17",33717971,33719507,"+",0,"NA","promoter-TSS (NM_001252480)","promoter-TSS (NM_001252480)",-62,"NR_045522",224703,"Mm.311439","NM_145486","ENSMUSG00000079557","2002-03-01","9530046H09Rik|MARCH-II","membrane-associated ring finger (C3HC4) 2","protein-coding"]
[8606,"chr9",103363174,103366625,"+",0,"NA","promoter-TSS (NM_001134427)","promoter-TSS (NM_001134427)",80,"NM_001134427",321022,"Mm.261025","NM_175565","ENSMUSG00000032803","Cdv3","2510010F10Rik|C230084J24Rik|C79446|TPP36","carnitine deficiency-associated gene expressed in ventricle 3","protein-coding"]
[6586,"chr5",144965487,144966118,"+",0,"NA","promoter-TSS (NM_001038627)","promoter-TSS (NM_001038627)",28,"NM_001038627",75788,"Mm.27735","NM_029438","ENSMUSG00000038780","Smurf1","4930431E10Rik|mKIAA1625","SMAD specific E3 ubiquitin protein ligase 1","protein-coding"]
[4032,"chr19",5456907,5457587,"+",0,"NA","exon (NM_198616, exon 1 of 1)","exon (NM_198616, exon 1 of 1)",316,"NM_198616",240514,"Mm.329657","NM_198616",null,"Ccdc85b","AI842788|BB115872","coiled-coil domain containing 85B","protein-coding"]
[4877,"chr2",156008204,156008424,"+",0,"NA","promoter-TSS (NM_001145352)","promoter-TSS (NM_001145352)",189,"NM_025516",66366,"Mm.141276","NM_025516","ENSMUSG00000005881","Ergic3","2310015B14Rik|AV318804|CGI-54|D2Ucla1|NY-BR-84|Sdbcag84","ERGIC and golgi 3","protein-coding"]
[6635,"chr6",8508867,8510553,"+",0,"NA","promoter-TSS (NR_040452)","promoter-TSS (NR_040452)",110,"NM_133236",170772,"Mm.210787","NM_133236","ENSMUSG00000029638","Glcci1","2310047L21Rik|A130036A18Rik|Fam117c|Gig18|Tssn1","glucocorticoid induced transcript 1","protein-coding"]
[2928,"chr15",98869568,98872719,"+",0,"NA","promoter-TSS (NM_001033276)","promoter-TSS (NM_001033276)",62,"NM_001033276",381022,"Mm.264889","NM_001033276","ENSMUSG00000048154","Kmt2d","ALR|BC032281|BC058659|C430014K11Rik|KMT2B|Mll2|Mll4","lysine (K)-specific methyltransferase 2D","protein-coding"]
[2193,"chr13",66904740,66905713,"+",0,"NA","promoter-TSS (NM_001177750)","promoter-TSS (NM_001177750)",124,"NM_026219",67530,"Mm.379136","NM_026219","ENSMUSG00000021520","Uqcrb","2210415M14Rik|QP-C|QPC|UQBC|UQBP|UQPC","ubiquinol-cytochrome c reductase binding protein","protein-coding"]
[3522,"chr17",35118791,35122194,"+",0,"NA","exon (NM_009975, exon 2 of 7)","exon (NM_009975, exon 2 of 7)",800,"NM_001303476",13001,"Mm.378901","NM_009975","ENSMUSG00000024387","Csnk2b","CK II beta","casein kinase 2, beta polypeptide","protein-coding"]
[2636,"chr15",4022404,4027949,"+",0,"NA","intron (NR_028266, intron 1 of 1)","intron (NR_028266, intron 1 of 1)",-1252,"NM_024188",67041,"Mm.13445","NM_024188","ENSMUSG00000022186","Oxct1","2610008O03Rik|Oxct|Oxct2a|Scot-s","3-oxoacid CoA transferase 1","protein-coding"]
[8680,"chr9",109081857,109083135,"+",0,"NA","promoter-TSS (NM_025689)","promoter-TSS (NM_025689)",0,"NM_025689",66658,"Mm.128227","NM_025689",null,"Ccdc51","5730568A12Rik|AI551049","coiled-coil domain containing 51","protein-coding"]
[277,"chr1",121326323,121329371,"+",0,"NA","promoter-TSS (NM_001271531)","promoter-TSS (NM_001271531)",-169,"NM_001271531",72999,"Mm.27136","NM_133748","ENSMUSG00000003721","Insig2","2900053I11Rik|C730043J18Rik|Insig-2","insulin induced gene 2","protein-coding"]
[1183,"chr11",61761235,61762524,"+",0,"NA","intron (NM_001164243, intron 1 of 10)","CpG",209,"NM_144806",212627,"Mm.27703","NM_144806","ENSMUSG00000020528","Prpsap2","A230054F23Rik","phosphoribosyl pyrophosphate synthetase-associated protein 2","protein-coding"]
[8989,"chrY",1285726,1286571,"+",0,"NA","intron (NM_012008, intron 1 of 16)","intron (NM_012008, intron 1 of 16)",465,"NM_012008",26900,"Mm.302938","NM_012008","ENSMUSG00000069045","Ddx3y","8030469F12Rik|D1Pas1-rs1|Dby","DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked","protein-coding"]
[8568,"chr9",89704536,89705361,"+",0,"NA","promoter-TSS (NM_025360)","promoter-TSS (NM_025360)",95,"NM_025360",66111,"Mm.27606","NM_025360","ENSMUSG00000032353","Tmed3","1200002G13Rik|AW546672|P24b","transmembrane emp24 domain containing 3","protein-coding"]
[2747,"chr15",73183790,73185952,"+",0,"NA","promoter-TSS (NM_153178)","promoter-TSS (NM_153178)",76,"NM_153178",239528,"Mm.23095","NM_153178",null,"Ago2","1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215","argonaute RISC catalytic subunit 2","protein-coding"]
[7556,"chr7",119521747,119523713,"+",0,"NA","intron (NM_027943, intron 1 of 11)","intron (NM_027943, intron 1 of 11)",752,"NM_027943",71830,"Mm.84631","NM_027943","ENSMUSG00000030968","Pdilt","1700007B13Rik","protein disulfide isomerase-like, testis expressed","protein-coding"]
[2215,"chr13",69533332,69536332,"+",0,"NA","promoter-TSS (NM_001169131)","promoter-TSS (NM_001169131)",-968,"NM_001169131",210106,"Mm.315959","NM_198600","ENSMUSG00000034575","Papd7","LAK-1|POLK|Pols|TRF4|TRF4-1","PAP associated domain containing 7","protein-coding"]
[8107,"chr8",106132992,106138860,"+",0,"NA","intron (NR_040344, intron 1 of 4)","CpG",526,"NR_040346",69771,"Mm.393274","NR_040344",null,"1810019D21Rik","-","RIKEN cDNA 1810019D21 gene","ncRNA"]
[2671,"chr15",28024228,28026497,"+",0,"NA","exon (NM_001081302, exon 1 of 57)","exon (NM_001081302, exon 1 of 57)",486,"NM_001081302",223435,"Mm.485422","NM_001081302","ENSMUSG00000022263","Trio","6720464I07Rik|AA408740|Solo","triple functional domain (PTPRF interacting)","protein-coding"]
[7818,"chr8",33652440,33655135,"+",0,"NA","intron (NM_010344, intron 1 of 12)","CpG",549,"NM_010344",14782,"Mm.283573","NM_010344","ENSMUSG00000031584","Gsr","AI325518|D8Ertd238e|Gr-1|Gr1","glutathione reductase","protein-coding"]
[8372,"chr9",45054427,45056669,"+",0,"NA","intron (NM_001093749, intron 1 of 5)","intron (NM_001093749, intron 1 of 5)",367,"NM_001093749",319742,"Mm.49611","NM_176993",null,"Mpzl3","5430427F17Rik|A530065I17Rik|rc","myelin protein zero-like 3","protein-coding"]
[5497,"chr4",40947504,40950733,"+",0,"NA","promoter-TSS (NM_001171739)","promoter-TSS (NM_001171739)",565,"NM_029814",76959,"Mm.212763","NM_029814","ENSMUSG00000028419","Chmp5","2210412K09Rik|AW545668","charged multivesicular body protein 5","protein-coding"]
[2417,"chr14",36968309,36969290,"+",0,"NA","promoter-TSS (NM_027045)","promoter-TSS (NM_027045)",-35,"NM_027045",72972,"Mm.27621","NM_027045","ENSMUSG00000058690","Ccser2","1700012P13Rik|2900054P12Rik|AI035535|AW108503|Fam190b|Gcap14","coiled-coil serine rich 2","protein-coding"]
[8402,"chr9",53247654,53248816,"+",0,"NA","promoter-TSS (NM_029936)","promoter-TSS (NM_029936)",-123,"NM_029936",77591,"Mm.133560","NM_029936","ENSMUSG00000053289","Ddx10","4632415A01Rik|AI646054","DEAD (Asp-Glu-Ala-Asp) box polypeptide 10","protein-coding"]
[1369,"chr11",85352337,85354118,"+",0,"NA","promoter-TSS (NM_138681)","promoter-TSS (NM_138681)",63,"NM_001166643",192197,"Mm.209989","NM_138681","ENSMUSG00000059439","Bcas3","1500019F07Rik|2610028P08Rik|AU021018|BC028339|K20D4|rudhira","breast carcinoma amplified sequence 3","protein-coding"]
[8535,"chr9",76545722,76548878,"+",0,"NA","Intergenic","(GA)n|Simple_repeat|Simple_repeat",-1496,"NM_001045518",208994,"Mm.256929","NM_001045518","ENSMUSG00000032358","Fam83b","C530008M07Rik|Gm516","family with sequence similarity 83, member B","protein-coding"]
[54,"chr1",36938621,36940650,"+",0,"NA","promoter-TSS (NM_018872)","promoter-TSS (NM_018872)",-108,"NM_018872",56030,"Mm.186943","NM_018872","ENSMUSG00000026116","Tmem131","2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257","transmembrane protein 131","protein-coding"]
[1151,"chr11",59201723,59203081,"+",0,"NA","promoter-TSS (NM_001302335)","promoter-TSS (NM_001302335)",29,"NR_037964",72203,"Mm.339566","NR_037964",null,"2610507I01Rik","5033414D05Rik","RIKEN cDNA 2610507I01 gene","ncRNA"]
[7607,"chr7",127243799,127244851,"+",0,"NA","promoter-TSS (NM_177362)","promoter-TSS (NM_177362)",-201,"NM_177362",244216,"Mm.41038","NM_177362","ENSMUSG00000054716","Zfp771","G630024C07Rik|Znf771","zinc finger protein 771","protein-coding"]
[3347,"chr17",24168147,24170233,"+",0,"NA","intron (NM_009729, intron 1 of 2)","CpG",205,"NR_037854",100039636,"Mm.30155","NR_037854",null,"Atp6v0c-ps2","Atp6l-ps2|Gm15487","ATPase, H+ transporting, lysosomal V0 subunit C, pseudogene 2","pseudo"]
[1204,"chr11",67921718,67922819,"+",0,"NA","promoter-TSS (NM_173754)","promoter-TSS (NM_173754)",-115,"NM_173754",216835,"Mm.158885","NM_173754","ENSMUSG00000020905","Usp43","-","ubiquitin specific peptidase 43","protein-coding"]
[8525,"chr9",73038829,73040343,"+",0,"NA","promoter-TSS (NM_001308425)","promoter-TSS (NM_001308425)",113,"NM_018889",55981,"Mm.139905","NM_018889","ENSMUSG00000079469","Pigb","Pig-b","phosphatidylinositol glycan anchor biosynthesis, class B","protein-coding"]
[2520,"chr14",60250875,60252172,"+",0,"NA","promoter-TSS (NM_170591)","promoter-TSS (NM_170591)",-145,"NM_170591",71844,"Mm.258051","NM_170591","ENSMUSG00000063895","Nupl1","1700017F11Rik|mKIAA0410","nucleoporin like 1","protein-coding"]
[7896,"chr8",69995345,69998850,"+",0,"NA","promoter-TSS (NM_145596)","promoter-TSS (NM_145596)",-713,"NM_145596",234366,"Mm.270044","NM_145596","ENSMUSG00000036180","Gatad2a","1110066C11Rik|BC031407|C80248","GATA zinc finger domain containing 2A","protein-coding"]
[88,"chr1",51915316,51915845,"+",0,"NA","intron (NM_001290982, intron 1 of 28)","CpG",398,"NM_001290982",17912,"Mm.3390","NM_010863","ENSMUSG00000018417","Myo1b","AA406997|MIH-L|MMIa","myosin IB","protein-coding"]
[1009,"chr11",20111910,20114199,"+",0,"NA","promoter-TSS (NM_146243)","promoter-TSS (NM_146243)",-103,"NM_146243",66713,"Mm.259045","NM_146243","ENSMUSG00000020152","Actr2","4921510D23Rik|AA409782|Arp2|D6Ertd746e","ARP2 actin-related protein 2","protein-coding"]
[8360,"chr9",44378887,44380370,"+",0,"NA","intron (NM_021395, intron 1 of 25)","CpG",138,"NM_021395",12282,"Mm.116721","NM_021395","ENSMUSG00000032115","Hyou1","AI415631|CBP-140|Cab140|Grp170|Orp150","hypoxia up-regulated 1","protein-coding"]
[403,"chr1",168432607,168432784,"+",0,"NA","promoter-TSS (NM_001291509)","promoter-TSS (NM_001291509)",-526,"NM_008783",18514,"Mm.43358","NM_008783","ENSMUSG00000052534","Pbx1","2310056B04Rik|D230003C07Rik|Pbx-1","pre B cell leukemia homeobox 1","protein-coding"]
[4825,"chr2",150786389,150786896,"+",0,"NA","promoter-TSS (NM_153781)","promoter-TSS (NM_153781)",-154,"NM_153781",110078,"Mm.222584","NM_153781","ENSMUSG00000033059","Pygb","-","brain glycogen phosphorylase","protein-coding"]
[7117,"chr7",19455157,19461412,"+",0,"NA","intron (NM_172279, intron 1 of 16)","CpG",210,"NM_172279",232944,"Mm.260504","NM_172279","ENSMUSG00000030397","Mark4","2410090P21Rik|C79806|Markl1","MAP/microtubule affinity regulating kinase 4","protein-coding"]
[3438,"chr17",29133725,29136811,"+",0,"NA","5' UTR (NM_001002786, exon 1 of 8)","5' UTR (NM_001002786, exon 1 of 8)",212,"NM_001002786",442827,"Mm.440341","NM_001002786","ENSMUSG00000064147","Rab44","9830134C10Rik","RAB44, member RAS oncogene family","protein-coding"]
[8792,"chrX",18161810,18164503,"+",0,"NA","exon (NM_009483, exon 1 of 29)","exon (NM_009483, exon 1 of 29)",581,"NM_001310444",22289,"Mm.257498","NM_009483","ENSMUSG00000037369","Kdm6a","Utx","lysine (K)-specific demethylase 6A","protein-coding"]
[1629,"chr11",116236383,116240079,"+",0,"NA","promoter-TSS (NM_025276)","promoter-TSS (NM_025276)",-140,"NM_025276",14027,"Mm.293683","NM_025276","ENSMUSG00000034282","Evpl","-","envoplakin","protein-coding"]
[6576,"chr5",143622121,143623195,"+",0,"NA","exon (NM_011182, exon 1 of 13)","exon (NM_011182, exon 1 of 13)",211,"NM_011182",19159,"Mm.281003","NM_011182","ENSMUSG00000018001","Cyth3","AI648983|ARNO3|CLM3|Grp1|Pscd3","cytohesin 3","protein-coding"]
[4197,"chr19",37206794,37209441,"+",0,"NA","promoter-TSS (NM_198300)","promoter-TSS (NM_198300)",572,"NM_001164336",69104,"Mm.175989","NM_027314","ENSMUSG00000023307","2005-03-01","1810015H18Rik|2310008I22Rik|2700055A20Rik|5730499H23Rik|E130202O05Rik|MARCH-V|MITOL|Marchv|Rnf153","membrane-associated ring finger (C3HC4) 5","protein-coding"]
[7003,"chr6",136827500,136829246,"+",0,"NA","promoter-TSS (NM_178776)","promoter-TSS (NM_178776)",-157,"NM_021714",60321,"Mm.141197","NM_021714","ENSMUSG00000030216","Wbp11","2510026P17Rik|D6Wsu113e|Npwbp|SIPP1","WW domain binding protein 11","protein-coding"]
[4366,"chr2",24383888,24386544,"+",0,"NA","promoter-TSS (NM_177611)","promoter-TSS (NM_177611)",-181,"NM_177611",215632,"Mm.490434","NM_177611","ENSMUSG00000026979","Psd4","BC046518|EFA6B","pleckstrin and Sec7 domain containing 4","protein-coding"]
[6053,"chr5",5558984,5559983,"+",0,"NA","promoter-TSS (NM_153116)","promoter-TSS (NM_153116)",18,"NM_153116",207704,"Mm.323984","NM_153116","ENSMUSG00000040464","Gtpbp10","4930545J22Rik|BC034507","GTP-binding protein 10 (putative)","protein-coding"]
[3454,"chr17",31563868,31565983,"+",0,"NA","intron (NM_016670, intron 1 of 10)","CpG",152,"NM_016670",18771,"Mm.259295","NM_016670","ENSMUSG00000006705","Pknox1","D17Wsu76e|PREP1","Pbx/knotted 1 homeobox","protein-coding"]
[8189,"chr8",121590038,121592158,"+",0,"NA","intron (NM_026160, intron 1 of 3)","intron (NM_026160, intron 1 of 3)",630,"NM_026160",67443,"Mm.28357","NM_026160",null,"Map1lc3b","1010001C15Rik|Atg8|LC3b|Map1lc3","microtubule-associated protein 1 light chain 3 beta","protein-coding"]
[4382,"chr2",25403278,25403536,"+",0,"NA","intron (NM_008721, intron 1 of 8)","CpG",357,"NM_008721",18146,"Mm.1131","NM_008721","ENSMUSG00000015094","Npdc1","AI314472|NPDC-1","neural proliferation, differentiation and control 1","protein-coding"]
[6626,"chr6",5496071,5496486,"+",0,"NA","promoter-TSS (NM_013743)","promoter-TSS (NM_013743)",0,"NM_013743",27273,"Mm.235547","NM_013743","ENSMUSG00000019577","Pdk4","AV005916","pyruvate dehydrogenase kinase, isoenzyme 4","protein-coding"]
[2885,"chr15",88750999,88752520,"+",0,"NA","promoter-TSS (NM_181412)","promoter-TSS (NM_181412)",48,"NM_181412",223773,"Mm.396622","NM_181412","ENSMUSG00000034333","Zbed4","1700009F06Rik","zinc finger, BED type containing 4","protein-coding"]
[8579,"chr9",96361801,96364280,"+",0,"NA","intron (NM_007502, intron 1 of 6)","intron (NM_007502, intron 1 of 6)",1259,"NM_007502",11933,"Mm.424","NM_007502","ENSMUSG00000032412","Atp1b3","AA409958|AI664000|AW212096","ATPase, Na+/K+ transporting, beta 3 polypeptide","protein-coding"]
[3106,"chr16",26367464,26373995,"+",0,"NA","intron (NM_016674, intron 1 of 3)","intron (NM_016674, intron 1 of 3)",1110,"NM_016674",12737,"Mm.289441","NM_016674","ENSMUSG00000022512","Cldn1","AI596271","claudin 1","protein-coding"]
[2488,"chr14",55589428,55592306,"+",0,"NA","promoter-TSS (NM_194346)","promoter-TSS (NM_194346)",154,"NM_011190",19188,"Mm.371573","NM_011190","ENSMUSG00000079197","Psme2","AA589371|AI788882|PA28b","proteasome (prosome, macropain) activator subunit 2 (PA28 beta)","protein-coding"]
[3869,"chr18",44658388,44662870,"+",0,"NA","intron (NM_001085373, intron 3 of 18)","intron (NM_001085373, intron 3 of 18)",-1036,"NR_026853",626275,"Mm.427116","NR_026853","ENSMUSG00000097610","A930012L18Rik","-","RIKEN cDNA A930012L18 gene","ncRNA"]
[1985,"chr12",112720962,112723991,"+",0,"NA","intron (NM_001024602, intron 1 of 18)","CpG",302,"NM_001024602",217882,"Mm.23689","NM_001024602","ENSMUSG00000072825","Cep170b","AI466840|AW555464|Kiaa0284|mKIAA0284","centrosomal protein 170B","protein-coding"]
[2669,"chr15",27569471,27570649,"+",0,"NA","intron (NM_020332, intron 7 of 11)","intron (NM_020332, intron 7 of 11)",-1434,"NR_106065",102466808,null,"NR_106065","ENSMUSG00000098416","Mir7117","Gm27729|mmu-mir-7117","microRNA 7117","ncRNA"]
[3567,"chr17",42741172,42743131,"+",0,"NA","promoter-TSS (NM_001033493)","promoter-TSS (NM_001033493)",28,"NM_001033493",435529,"Mm.136350","NM_001033493","ENSMUSG00000057899","Adgrf2","Gpr111|PGR20","adhesion G protein-coupled receptor F2","protein-coding"]

{"sheet":"5_enhancers bound by Dnmt3a","index":4,"n_rows":364,"n_cols":19,"rows_kept":364,"read":"bin_record_odd","flags":["formulas_cached_only"]}
["PeakID (cmd=annotatePeaks.pl Dnmt3a_back_u_K27ac_WT_back_enhancers.bed mm10)","Chr","Start","End","Strand","Peak Score","Focus Ratio/Region Size","Annotation","Detailed Annotation","Distance to TSS","Nearest PromoterID","Entrez ID","Nearest Unigene","Nearest Refseq","Nearest Ensembl","Gene Name","Gene Alias","Gene Description","Gene Type"]
["MACS_peak_68162","chr15",85669713,85672080,"+",1004.83,"NA","Intergenic","CpG",-32877,"NR_110483",102800312,"Mm.33117","NR_110483",null,"Lincppara","Mirlet7bhg|linc-Ppara","long intergenic noncoding RNA near Ppara","ncRNA"]
["MACS_peak_148979","chr5",113136990,113139238,"+",910.41,"NA","intron (NM_172884, intron 1 of 7)","CpG",25199,"NM_172884",243219,"Mm.160131","NM_172884","ENSMUSG00000051339","2900026A02Rik","8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671","RIKEN cDNA 2900026A02 gene","protein-coding"]
["MACS_peak_161240","chr6",67534643,67536157,"+",724.82,"NA","exon (NM_020047, exon 1 of 1)","exon (NM_020047, exon 1 of 1)",422,"NM_020047",56753,"Mm.439913","NM_020047","ENSMUSG00000051397","Tacstd2","C80403|EGP-1|GA733-1|Ly97|TROP2","tumor-associated calcium signal transducer 2","protein-coding"]
["MACS_peak_129599","chr4",108779911,108780929,"+",573.18,"NA","intron (NM_001254730, intron 3 of 3)","CpG",53164,"NM_027453",70533,"Mm.379178","NM_027453","ENSMUSG00000028568","Btf3l4","4632412E09Rik|5730434I03Rik|AI316863|AU022207|AW552446","basic transcription factor 3-like 4","protein-coding"]
["MACS_peak_71199","chr15",101976560,101977902,"+",570.05,"NA","Intergenic","Intergenic",-22944,"NM_212487",332131,"Mm.325105","NM_212487","ENSMUSG00000050463","Krt78","2310030B04Rik|Kb40","keratin 78","protein-coding"]
["MACS_peak_120592","chr3",87905941,87906959,"+",569.56,"NA","5' UTR (NM_008231, exon 1 of 6)","5' UTR (NM_008231, exon 1 of 6)",129,"NM_008231",15191,"Mm.292208","NM_008231","ENSMUSG00000004897","Hdgf","AI118077|D3Ertd299e","hepatoma-derived growth factor","protein-coding"]
["MACS_peak_188520","chr8",84200667,84201905,"+",560.81,"NA","Intergenic","Intergenic",-7232,"NR_029740",387216,null,"NR_029740","ENSMUSG00000065611","Mir23a","Mirn23a|mir-23a|mmu-mir-23a","microRNA 23a","ncRNA"]
["MACS_peak_32720","chr11",100396803,100398044,"+",558.59,"NA","promoter-TSS (NR_132425)","promoter-TSS (NR_132425)",367,"NM_010593",16480,"Mm.299774","NM_010593","ENSMUSG00000001552","Jup","Ctnng|D930025P04Rik|PG","junction plakoglobin","protein-coding"]
["MACS_peak_205602","chr9",107906700,107907872,"+",528.66,"NA","exon (NM_009074, exon 1 of 19)","exon (NM_009074, exon 1 of 19)",397,"NR_109782",19882,"Mm.3901","NM_009074","ENSMUSG00000032584","Mst1r","CD136|CDw136|Fv-2|Fv2|PTK8|Ron|STK","macrophage stimulating 1 receptor (c-met-related tyrosine kinase)","protein-coding"]
["MACS_peak_28489","chr11",77762997,77764451,"+",519.31,"NA","Intergenic","Intergenic",-13511,"NM_001291213",360013,"Mm.341248","NM_011586","ENSMUSG00000000631","Myo18a","MAJN|MyoPDZ|MysPDZ","myosin XVIIIA","protein-coding"]
["MACS_peak_17751","chr10",81412806,81414280,"+",512.65,"NA","intron (NM_026756, intron 2 of 8)","intron (NM_026756, intron 2 of 8)",2754,"NR_106141",102465778,null,"NR_106141","ENSMUSG00000105379","Mir1191b","mmu-mir-1191b","microRNA 1191b","ncRNA"]
["MACS_peak_202598","chr9",66511423,66512740,"+",490.5,"NA","intron (NM_175206, intron 1 of 1)","intron (NM_175206, intron 1 of 1)",2512,"NM_175206",74165,"Mm.297998","NM_175206","ENSMUSG00000050503","Fbxl22","1110004B15Rik","F-box and leucine-rich repeat protein 22","protein-coding"]
["MACS_peak_62457","chr15",38470210,38471468,"+",490.27,"NA","Intergenic","CpG",19708,"NR_105916",102465574,null,"NR_105916","ENSMUSG00000099110","Mir6951","Gm27765|mmu-mir-6951","microRNA 6951","ncRNA"]
["MACS_peak_165267","chr6",114968577,114970024,"+",477.94,"NA","Intergenic","CpG",-47548,"NM_177683",232334,"Mm.268357","NM_177683",null,"Vgll4","BC048841|VGL-4","vestigial like 4 (Drosophila)","protein-coding"]
["MACS_peak_157168","chr5",142821256,142822081,"+",467.36,"NA","Intergenic","Intergenic",-4281,"NM_001122730",231861,"Mm.354649","NM_178242","ENSMUSG00000039477","Tnrc18","BC025631|EG381742|Zfp469","trinucleotide repeat containing 18","protein-coding"]
["MACS_peak_139338","chr4",150060943,150062051,"+",465.31,"NA","Intergenic","Intergenic",-6957,"NR_029751",723848,null,"NR_029751","ENSMUSG00000065493","Mir34a","Mirn34a|mir-34a|mmu-mir-34a","microRNA 34a","ncRNA"]
["MACS_peak_134104","chr4",133813396,133814212,"+",463.6,"NA","Intergenic","CpG",-60193,"NM_001080819",93760,"Mm.22478","NM_001080819","ENSMUSG00000007880","Arid1a","1110030E03Rik|BAF250a|Osa1|Smarcf1","AT rich interactive domain 1A (SWI-like)","protein-coding"]
["MACS_peak_50042","chr13",48545823,48546907,"+",456.93,"NA","Intergenic","CpG",-8093,"NR_029725",387244,null,"NR_029725","ENSMUSG00000065421","Mirlet7a-1","Let-7a|Mirnlet7a|Mirnlet7a-1|let-7a-1","microRNA let7a-1","ncRNA"]
["MACS_peak_134043","chr4",133599439,133600538,"+",456.58,"NA","TTS (NM_018754)","TTS (NM_018754)",2180,"NM_018754",55948,"Mm.44482","NM_018754","ENSMUSG00000047281","Sfn","Er|Mme1|Ywhas","stratifin","protein-coding"]
["MACS_peak_3411","chr1",86442143,86443260,"+",435.9,"NA","Intergenic","CpG",16372,"NM_027966",71863,"Mm.179627","NM_027966","ENSMUSG00000036574","1700019O17Rik","-","RIKEN cDNA 1700019O17 gene","protein-coding"]
["MACS_peak_115230","chr2",167777293,167778066,"+",428.14,"NA","Intergenic","CpG",86502,"NR_015500",329562,"Mm.123101","NM_177851","ENSMUSG00000006462","A530013C23Rik","-","RIKEN cDNA A530013C23 gene","ncRNA"]
["MACS_peak_80432","chr17",27037731,27038672,"+",425.69,"NA","Intergenic","Intergenic",8942,"NM_027544",70772,"Mm.440437","NM_027544","ENSMUSG00000048731","Ggnbp1","0610031G08Rik|mdf","gametogenetin binding protein 1","protein-coding"]
["MACS_peak_99232","chr19",53313024,53313976,"+",414.99,"NA","intron (NM_001008542, intron 1 of 5)","CpG",2994,"NM_001008542",17859,"Mm.2154","NM_010847","ENSMUSG00000025025","Mxi1","ENSMUSG00000067085|Gm10197|Mad2|bHLHc11","MAX interactor 1, dimerization protein","protein-coding"]
["MACS_peak_11000","chr1",191224291,191225299,"+",411.37,"NA","Intergenic","CpG",-41462,"NM_007498",11910,"Mm.2706","NM_007498","ENSMUSG00000026628","Atf3","LRG-21","activating transcription factor 3","protein-coding"]
["MACS_peak_69028","chr15",89180175,89181325,"+",408.48,"NA","promoter-TSS (NM_138749)","promoter-TSS (NM_138749)",38,"NM_001284506",140570,"Mm.267514","NM_138749","ENSMUSG00000036606","Plxnb2","Debt|plexin-B2","plexin B2","protein-coding"]
["MACS_peak_41256","chr12",52503962,52505055,"+",408.45,"NA","Intergenic","CpG",-11569,"NM_009706",11855,"Mm.35059","NM_009706","ENSMUSG00000035133","Arhgap5","p190-B|p190B","Rho GTPase activating protein 5","protein-coding"]
["MACS_peak_3425","chr1",86503852,86504785,"+",396.97,"NA","Intergenic","CpG",-22418,"NM_008972",19231,"Mm.19187","NM_008972","ENSMUSG00000026238","Ptma","Thym","prothymosin alpha","protein-coding"]
["MACS_peak_103692","chr2",30928967,30930174,"+",396.46,"NA","Intergenic","Intergenic",-23431,"NM_133673",30934,"Mm.249164","NM_133673","ENSMUSG00000026848","Tor1b","2610016F05Rik|DQ1|torsinB","torsin family 1, member B","protein-coding"]
["MACS_peak_134049","chr4",133604999,133606614,"+",394.6,"NA","Intergenic","Intergenic",-3638,"NM_018754",55948,"Mm.44482","NM_018754","ENSMUSG00000047281","Sfn","Er|Mme1|Ywhas","stratifin","protein-coding"]
["MACS_peak_115180","chr2",167721373,167722264,"+",392.18,"NA","Intergenic","Intergenic",30641,"NR_015500",329562,"Mm.123101","NM_177851","ENSMUSG00000006462","A530013C23Rik","-","RIKEN cDNA A530013C23 gene","ncRNA"]
["MACS_peak_115241","chr2",167789289,167790277,"+",390.08,"NA","Intergenic","Intergenic",98606,"NR_015500",329562,"Mm.123101","NM_177851","ENSMUSG00000006462","A530013C23Rik","-","RIKEN cDNA A530013C23 gene","ncRNA"]
["MACS_peak_81257","chr17",28259219,28260416,"+",388.83,"NA","intron (NM_011145, intron 2 of 7)","intron (NM_011145, intron 2 of 7)",-11891,"NR_045427",69050,"Mm.486938","NR_045427","ENSMUSG00000002250","1810013A23Rik","-","RIKEN cDNA 1810013A23 gene","ncRNA"]
["MACS_peak_188837","chr8",84985397,84986375,"+",387.77,"NA","Intergenic","Intergenic",-4709,"NM_133255",170833,"Mm.247775","NM_133255","ENSMUSG00000052566","Hook2","A630054I03Rik","hook homolog 2 (Drosophila)","protein-coding"]
["MACS_peak_103520","chr2",30657895,30659041,"+",383.69,"NA","Intergenic","CpG",-62742,"NR_037272",100526499,null,"NR_037272","ENSMUSG00000093091","Mir3089","mir-3089|mmu-mir-3089","microRNA 3089","ncRNA"]
["MACS_peak_2633","chr1",74295113,74296203,"+",372.51,"NA","intron (NM_027154, intron 1 of 11)","intron (NM_027154, intron 1 of 11)",8678,"NM_027154",69660,"Mm.261182","NM_027154","ENSMUSG00000006301","Tmbim1","2310061B02Rik|AA960455|AU024746|C78899|RECS1|Tmbib1|mKIAA4161","transmembrane BAX inhibitor motif containing 1","protein-coding"]
["MACS_peak_171667","chr7",34655115,34655926,"+",369.5,"NA","Intergenic","CpG",-2679,"NM_146188",233107,"Mm.486198","NM_146188","ENSMUSG00000030499","Kctd15","BC031749","potassium channel tetramerisation domain containing 15","protein-coding"]
["MACS_peak_81628","chr17",29159836,29160744,"+",369.29,"NA","intron (NM_153166, intron 19 of 20)","intron (NM_153166, intron 19 of 20)",25234,"NM_001002786",442827,"Mm.440341","NM_001002786","ENSMUSG00000064147","Rab44","9830134C10Rik","RAB44, member RAS oncogene family","protein-coding"]
["MACS_peak_170630","chr7",28569524,28570796,"+",368.94,"NA","intron (NM_027470, intron 1 of 9)","intron (NM_027470, intron 1 of 9)",-9176,"NR_106016",102466795,null,"NR_106016","ENSMUSG00000098558","Mir7049","Gm27277|mmu-mir-7049","microRNA 7049","ncRNA"]
["MACS_peak_180008","chr7",127886455,127887674,"+",367.98,"NA","exon (NM_001081268, exon 9 of 11)","exon (NM_001081268, exon 9 of 11)",3906,"NM_001081268",330657,"Mm.425491","NM_001081268","ENSMUSG00000044139","Prss53","Pol3s|mFLJ00289","protease, serine 53","protein-coding"]
["MACS_peak_108911","chr2",116975256,116976218,"+",365.39,"NA","Intergenic","CpG",75585,"NR_040335",320975,"Mm.132509","NR_040335","ENSMUSG00000085316","D330050G23Rik","-","RIKEN cDNA D330050G23 gene","ncRNA"]
["MACS_peak_152614","chr5",123138346,123139365,"+",364.92,"NA","Intergenic","CpG",-3338,"NM_001040398",208043,"Mm.250391","NM_177581","ENSMUSG00000038384","Setd1b","AA516740|BC035291|KMT2G|mKIAA1076","SET domain containing 1B","protein-coding"]
["MACS_peak_24471","chr11",54955711,54956383,"+",357.58,"NA","5' UTR (NM_001199275, exon 2 of 19)","5' UTR (NM_001199275, exon 2 of 19)",6893,"NM_021327",57783,"Mm.259671","NM_021327","ENSMUSG00000020400","Tnip1","ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN","TNFAIP3 interacting protein 1","protein-coding"]
["MACS_peak_105530","chr2",35661185,35662143,"+",351.88,"NA","intron (NM_001290641, intron 3 of 15)","CpG-8041",-30330,"NM_001001602",69601,"Mm.29629","NM_001001602","ENSMUSG00000026883","Dab2ip","2310011D08Rik|AI480459|Aip1|mKIAA1743","disabled 2 interacting protein","protein-coding"]
["MACS_peak_81782","chr17",29401464,29402543,"+",351.09,"NA","Intergenic","Intergenic",41089,"NM_001159538",26382,"Mm.279187","NM_013710","ENSMUSG00000024013","Fgd2","Tcd-2|Tcd2|ZFYVE4|tcs-2|tcs2","FYVE, RhoGEF and PH domain containing 2","protein-coding"]
["MACS_peak_156272","chr5",139796720,139797731,"+",351.02,"NA","intron (NM_010757, intron 1 of 2)","intron (NM_010757, intron 1 of 2)",5689,"NM_010757",17135,"Mm.157313","NM_010757","ENSMUSG00000018143","Mafk","AW061068|NF-E2|Nfe2u","v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)","protein-coding"]
["MACS_peak_84580","chr17",46856997,46857635,"+",349.97,"NA","Intergenic","CpG",-25903,"NM_001100452",210982,"Mm.37642","NM_001100452","ENSMUSG00000036568","Gltscr1l","mKIAA0240","GLTSCR1-like","protein-coding"]
["MACS_peak_47143","chr12",112130058,112130930,"+",347.8,"NA","promoter-TSS (NR_029590)","promoter-TSS (NR_029590)",-386,"NR_029590",387199,null,"NR_029590","ENSMUSG00000065574","Mir203","Mirn203|mir-203|mmu-mir-203","microRNA 203","ncRNA"]
["MACS_peak_69556","chr15",96709276,96710315,"+",347.11,"NA","Intergenic","CpG",-10097,"NM_175121",67760,"Mm.46754","NM_175121","ENSMUSG00000022462","Slc38a2","5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382","solute carrier family 38, member 2","protein-coding"]
["MACS_peak_157160","chr5",142813796,142814704,"+",342.57,"NA","intron (NM_001122730, intron 2 of 27)","intron (NM_001122730, intron 2 of 27)",3137,"NM_178242",231861,"Mm.354649","NM_178242","ENSMUSG00000039477","Tnrc18","BC025631|EG381742|Zfp469","trinucleotide repeat containing 18","protein-coding"]
["MACS_peak_115251","chr2",167808580,167809381,"+",342.09,"NA","Intergenic","Intergenic",117803,"NR_015500",329562,"Mm.123101","NM_177851","ENSMUSG00000006462","A530013C23Rik","-","RIKEN cDNA A530013C23 gene","ncRNA"]
["MACS_peak_95293","chr19",6951216,6952399,"+",338.84,"NA","TTS (NM_007522)","TTS (NM_007522)",9245,"NM_001285453",12015,"Mm.4387","NM_007522","ENSMUSG00000024959","Bad","AI325008|Bbc2","BCL2-associated agonist of cell death","protein-coding"]
["MACS_peak_54076","chr13",103773920,103774905,"+",336.42,"NA","Intergenic","CpG",-9830,"NM_172592",218543,"Mm.458176","NM_172592","ENSMUSG00000032621","Srek1","8430401B01|AI450757|AI462342|SRrp508|SRrp86|Sfrs12|Srsf12","splicing regulatory glutamine/lysine-rich protein 1","protein-coding"]
["MACS_peak_3786","chr1",88639369,88640253,"+",336.16,"NA","Intergenic","Intergenic",62380,"NM_177305",320982,"Mm.27968","NM_177305","ENSMUSG00000049866","Arl4c","A630084M22Rik|Arl7|LAK","ADP-ribosylation factor-like 4C","protein-coding"]
["MACS_peak_133653","chr4",132532950,132533749,"+",335.69,"NA","exon (NM_007512, exon 3 of 4)","exon (NM_007512, exon 3 of 4)",2065,"NM_007512",11983,"Mm.2171","NM_007512","ENSMUSG00000054428","Atpif1","Atpi|IF(1)|If1","ATPase inhibitory factor 1","protein-coding"]
["MACS_peak_78028","chr17",6757382,6758359,"+",333.81,"NA","intron (NM_009510, intron 2 of 12)","intron (NM_009510, intron 2 of 12)",24910,"NM_009510",22350,"Mm.277812","NM_009510","ENSMUSG00000052397","Ezr","AW146364|R75297|Vil2|p81","ezrin","protein-coding"]
["MACS_peak_67124","chr15",83158111,83159285,"+",330.21,"NA","intron (NM_029787, intron 8 of 8)","MIRb|SINE|MIR",9053,"NR_004432",104307,"Mm.471434","NR_004432","ENSMUSG00000065176","Rnu12","-","RNA U12, small nuclear","snRNA"]
["MACS_peak_62278","chr15",36938265,36939174,"+",328.41,"NA","Intergenic","CpG",68683,"NM_026521",68036,"Mm.371631","NM_026521","ENSMUSG00000062397","Zfp706","3110006P09Rik|AA793007|AW536850|C77232|Znf706","zinc finger protein 706","protein-coding"]
["MACS_peak_171627","chr7",34570062,34570812,"+",327.35,"NA","Intergenic","Intergenic",82404,"NM_146188",233107,"Mm.486198","NM_146188","ENSMUSG00000030499","Kctd15","BC031749","potassium channel tetramerisation domain containing 15","protein-coding"]
["MACS_peak_180375","chr7",130645879,130646779,"+",321.68,"NA","intron (NM_001004468, intron 3 of 21)","CpG",-46227,"NM_021314",57752,"Mm.86322","NM_021314","ENSMUSG00000030852","Tacc2","mKIAA4180","transforming, acidic coiled-coil containing protein 2","protein-coding"]
["MACS_peak_135184","chr4",136174837,136175603,"+",316.97,"NA","intron (NM_177733, intron 1 of 6)","intron (NM_177733, intron 1 of 6)",2946,"NM_177733",242705,"Mm.307932","NM_177733","ENSMUSG00000018983","E2f2","E2F-2","E2F transcription factor 2","protein-coding"]
["MACS_peak_71858","chr16",5134251,5135138,"+",316.87,"NA","Intergenic","Intergenic",-2213,"NM_008909",19041,"Mm.266875","NM_008909","ENSMUSG00000039457","Ppl","AW553870","periplakin","protein-coding"]
["MACS_peak_128666","chr4",101292855,101293532,"+",315.98,"NA","Intergenic","CpG",-27911,"NM_146145",16451,"Mm.289657","NM_146145","ENSMUSG00000028530","Jak1","AA960307|BAP004|C130039L05Rik","Janus kinase 1","protein-coding"]
["MACS_peak_69771","chr15",97825080,97825901,"+",315.79,"NA","intron (NM_001204275, intron 1 of 24)","intron (NM_001204275, intron 1 of 24)",6277,"NM_019572",56233,"Mm.384027","NM_019572","ENSMUSG00000022475","Hdac7","5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062","histone deacetylase 7","protein-coding"]
["MACS_peak_78044","chr17",6827628,6828522,"+",314.05,"NA","Intergenic","CpG",-45295,"NM_009510",22350,"Mm.277812","NM_009510","ENSMUSG00000052397","Ezr","AW146364|R75297|Vil2|p81","ezrin","protein-coding"]
["MACS_peak_56936","chr14",34548997,34549684,"+",309.44,"NA","intron (NM_001039073, intron 10 of 14)","CpG",-26539,"NM_030062",78243,"Mm.117483","NM_030062","ENSMUSG00000021797","9230112D13Rik","-","RIKEN cDNA 9230112D13 gene","protein-coding"]
["MACS_peak_135181","chr4",136169646,136170464,"+",304.99,"NA","Intergenic","Intergenic",-2219,"NM_177733",242705,"Mm.307932","NM_177733","ENSMUSG00000018983","E2f2","E2F-2","E2F transcription factor 2","protein-coding"]
["MACS_peak_168786","chr7",16313853,16314550,"+",304.55,"NA","intron (NM_133234, intron 3 of 3)","intron (NM_133234, intron 3 of 3)",4618,"NM_133234",170770,"Mm.7660","NM_133234","ENSMUSG00000002083","Bbc3","PUMA|PUMA/JFY1","BCL2 binding component 3","protein-coding"]
["MACS_peak_135702","chr4",137387929,137388820,"+",304.54,"NA","Intergenic","CpG",21417,"NM_001126318",242711,"Mm.475541","NM_001126318","ENSMUSG00000078520","Cela3a","Gm13011|OTTMUSG00000009877","chymotrypsin-like elastase family, member 3A","protein-coding"]
["MACS_peak_141556","chr4",155063614,155064450,"+",303.31,"NA","Intergenic","Intergenic",-2998,"NM_001042407",668173,"Mm.133114","NM_001042407","ENSMUSG00000029047","Pex10","AV128229|Gm142","peroxisomal biogenesis factor 10","protein-coding"]
["MACS_peak_17519","chr10",81145031,81145868,"+",300.8,"NA","intron (NM_010731, intron 2 of 2)","B1_Mur2|SINE|Alu",9178,"NM_010731",16969,"Mm.20920","NM_010731","ENSMUSG00000035011","Zbtb7a","9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7","zinc finger and BTB domain containing 7a","protein-coding"]
["MACS_peak_104035","chr2",31541570,31542333,"+",299.74,"NA","Intergenic","Intergenic",-30700,"NM_001033389",320267,"Mm.207261","NM_001033389","ENSMUSG00000026843","Fubp3","A330051M14Rik|AV006371|FBP3|Marta2","far upstream element (FUSE) binding protein 3","protein-coding"]
["MACS_peak_71694","chr16",4586518,4587086,"+",298.08,"NA","Intergenic","CpG",-7911,"NM_031184",83396,"Mm.134072","NM_031184","ENSMUSG00000014303","Glis2","Gli5|Klf16|Nkl","GLIS family zinc finger 2","protein-coding"]
["MACS_peak_103560","chr2",30711857,30712577,"+",298.01,"NA","Intergenic","CpG",-8993,"NR_037272",100526499,null,"NR_037272","ENSMUSG00000093091","Mir3089","mir-3089|mmu-mir-3089","microRNA 3089","ncRNA"]
["MACS_peak_87444","chr17",83899273,83900063,"+",297.87,"NA","Intergenic","Intergenic",-52878,"NM_025325",107766,"Mm.30100","NM_025325","ENSMUSG00000000673","Haao","0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO","3-hydroxyanthranilate 3,4-dioxygenase","protein-coding"]
["MACS_peak_136683","chr4",139594981,139595937,"+",296.79,"NA","intron (NM_001205173, intron 1 of 8)","intron (NM_001205173, intron 1 of 8)",20739,"NM_001205173",212632,"Mm.30464","NM_183148","ENSMUSG00000041025","Iffo2","C79267","intermediate filament family orphan 2","protein-coding"]
["MACS_peak_21244","chr11",5061945,5062787,"+",294.76,"NA","intron (NM_001190406, intron 3 of 4)","intron (NM_001190406, intron 3 of 4)",2961,"NM_144560",78926,"Mm.44591","NM_030228","ENSMUSG00000034201","Gas2l1","4930500E24Rik|D0Jmb1|Gar22|TU-71.1","growth arrest-specific 2 like 1","protein-coding"]
["MACS_peak_32658","chr11",100285008,100286045,"+",293.2,"NA","Intergenic","Intergenic",-15655,"NM_212483",68239,"Mm.158190","NM_212483","ENSMUSG00000053654","Krt42","2410039E07Rik|K17n|Ka22|ecat6","keratin 42","protein-coding"]
["MACS_peak_122461","chr3",103102370,103103174,"+",292.44,"NA","Intergenic","CpG",-24784,"NM_177857",329727,"Mm.293641","NM_177857","ENSMUSG00000007379","Dennd2c","A930010I20Rik","DENN/MADD domain containing 2C","protein-coding"]
["MACS_peak_190871","chr8",106619397,106620402,"+",292.32,"NA","intron (NM_009864, intron 2 of 15)","intron (NM_009864, intron 2 of 15)",16549,"NM_009864",12550,"Mm.35605","NM_009864","ENSMUSG00000000303","Cdh1","AA960649|ARC-1|E-cad|Ecad|L-CAM|UVO|Um","cadherin 1","protein-coding"]
["MACS_peak_101197","chr2",25245756,25246486,"+",292.16,"NA","exon (NM_001252542, exon 14 of 14)","exon (NM_001252542, exon 14 of 14)",3192,"NM_176834",68846,"Mm.24777","NM_176834","ENSMUSG00000044628","Rnf208","1110061N23Rik","ring finger protein 208","protein-coding"]
["MACS_peak_115231","chr2",167778293,167779095,"+",291.8,"NA","Intergenic","Intergenic",87517,"NR_015500",329562,"Mm.123101","NM_177851","ENSMUSG00000006462","A530013C23Rik","-","RIKEN cDNA A530013C23 gene","ncRNA"]
["MACS_peak_24806","chr11",57962315,57963145,"+",291.55,"NA","Intergenic","Intergenic",-46334,"NM_028451",73158,"Mm.248843","NM_028451","ENSMUSG00000037331","Larp1","1810024J12Rik|3110040D16Rik|Larp|mKIAA0731","La ribonucleoprotein domain family, member 1","protein-coding"]
["MACS_peak_90201","chr18",38202721,38203343,"+",287.59,"NA","exon (NM_029357, exon 2 of 3)","exon (NM_029357, exon 2 of 3)",6730,"NM_029357",75599,"Mm.36560","NM_029357","ENSMUSG00000051375","Pcdh1","2010005A06Rik|AI585920","protocadherin 1","protein-coding"]
["MACS_peak_183567","chr8",4677238,4678197,"+",285.87,"NA","Intergenic","CpG",64547,"NM_145591",233987,"Mm.102799","NM_145591",null,"Zfp958","-","zinc finger protein 958","protein-coding"]
["MACS_peak_153342","chr5",125140031,125140804,"+",284.38,"NA","intron (NM_011424, intron 1 of 46)","intron (NM_011424, intron 1 of 46)",38797,"NM_001253905",20602,"Mm.278646","NM_011424","ENSMUSG00000029478","Ncor2","N-CoR|SMRT|SMRTe","nuclear receptor co-repressor 2","protein-coding"]
["MACS_peak_78627","chr17",13743036,13744123,"+",281.94,"NA","intron (NM_022311, intron 1 of 2)","intron (NM_022311, intron 1 of 2)",-16962,"NM_010806",17356,"Mm.59167","NM_010806","ENSMUSG00000068036","Mllt4","5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|S-afadin","myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4","protein-coding"]
["MACS_peak_44165","chr12",99392172,99392850,"+",281.49,"NA","intron (NM_183186, intron 1 of 5)","CpG",57563,"NM_183186",71375,"Mm.341972","NM_183186","ENSMUSG00000033713","Foxn3","5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1","forkhead box N3","protein-coding"]
["MACS_peak_153343","chr5",125140821,125141295,"+",281.13,"NA","intron (NM_011424, intron 1 of 46)","intron (NM_011424, intron 1 of 46)",38156,"NM_001253905",20602,"Mm.278646","NM_011424","ENSMUSG00000029478","Ncor2","N-CoR|SMRT|SMRTe","nuclear receptor co-repressor 2","protein-coding"]
["MACS_peak_26775","chr11",69410806,69411437,"+",278.44,"NA","intron (NM_001017426, intron 1 of 22)","CpG",2554,"NM_001017426",216850,"Mm.261201","NM_001017426","ENSMUSG00000018476","Kdm6b","1700064E03Rik|BC038313|Jmjd3|mKIAA0346","KDM1 lysine (K)-specific demethylase 6B","protein-coding"]
["MACS_peak_84579","chr17",46856324,46856969,"+",276.94,"NA","Intergenic","CpG",-25233,"NM_001100452",210982,"Mm.37642","NM_001100452","ENSMUSG00000036568","Gltscr1l","mKIAA0240","GLTSCR1-like","protein-coding"]
["MACS_peak_71456","chr15",102999207,102999865,"+",276.31,"NA","Intergenic","Intergenic",8997,"NM_010466",15426,"Mm.6167","NM_010466",null,"Hoxc8","D130011F21Rik|Hox-3.1","homeobox C8","protein-coding"]
["MACS_peak_27772","chr11",74637908,74638920,"+",276.01,"NA","exon (NM_001013784, exon 4 of 4)","exon (NM_001013784, exon 4 of 4)",-11081,"NM_001081158",74148,"Mm.214574","NM_001081158","ENSMUSG00000020741","Cluh","1300001I01Rik|Kiaa0664|mKIAA0664","clustered mitochondria (cluA/CLU1) homolog","protein-coding"]
["MACS_peak_149043","chr5",113216209,113217032,"+",275.15,"NA","Intergenic","Intergenic",-10289,"NM_001033428",333048,"Mm.332586","NM_001033428","ENSMUSG00000066964","Tmem211","Gm854","transmembrane protein 211","protein-coding"]
["MACS_peak_195333","chr8",124265558,124266325,"+",274.83,"NA","intron (NM_139272, intron 1 of 15)","intron (NM_139272, intron 1 of 15)",34547,"NM_139272",108148,"Mm.33808","NM_139272","ENSMUSG00000089704","Galnt2","AI480629","UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2","protein-coding"]
["MACS_peak_9884","chr1",180777590,180778410,"+",274.51,"NA","Intergenic","CpG",35605,"NM_008210",15078,"Mm.138832","NM_008210","ENSMUSG00000060743","H3f3a","H3.3A","H3 histone, family 3A","protein-coding"]
["MACS_peak_47138","chr12",112125924,112126758,"+",274.15,"NA","exon (NM_001081169, exon 14 of 15)","exon (NM_001081169, exon 14 of 15)",-4539,"NR_029590",387199,null,"NR_029590","ENSMUSG00000065574","Mir203","Mirn203|mir-203|mmu-mir-203","microRNA 203","ncRNA"]
["MACS_peak_152829","chr5",123979154,123979824,"+",272.12,"NA","intron (NM_145070, intron 1 of 31)","intron (NM_145070, intron 1 of 31)",5861,"NM_145070",29816,"Mm.149954","NM_145070",null,"Hip1r","AA410023|mKIAA0655","huntingtin interacting protein 1 related","protein-coding"]
["MACS_peak_133993","chr4",133489039,133489996,"+",271.69,"NA","Intergenic","Intergenic",9033,"NM_001081156",69539,"Mm.151594","NM_001081156","ENSMUSG00000056596","Trnp1","2300002D11Rik|Trnp","TMF1-regulated nuclear protein 1","protein-coding"]
["MACS_peak_136632","chr4",139500643,139501442,"+",270.33,"NA","Intergenic","Intergenic",-29506,"NM_183148",212632,"Mm.30464","NM_183148","ENSMUSG00000041025","Iffo2","C79267","intermediate filament family orphan 2","protein-coding"]
["MACS_peak_166665","chr6",125343992,125344652,"+",270.26,"NA","3' UTR (NM_011324, exon 12 of 12)","3' UTR (NM_011324, exon 12 of 12)",-5401,"NM_011609",21937,"Mm.1258","NM_011609","ENSMUSG00000030341","Tnfrsf1a","CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R","tumor necrosis factor receptor superfamily, member 1a","protein-coding"]
["MACS_peak_87443","chr17",83897306,83898065,"+",270.13,"NA","Intergenic","Intergenic",-50895,"NM_025325",107766,"Mm.30100","NM_025325","ENSMUSG00000000673","Haao","0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO","3-hydroxyanthranilate 3,4-dioxygenase","protein-coding"]
["MACS_peak_81325","chr17",28340977,28341827,"+",269.54,"NA","exon (NM_001098226, exon 2 of 13)","exon (NM_001098226, exon 2 of 13)",8944,"NM_001204156",21678,"Mm.6655","NM_011566","ENSMUSG00000002249","Tead3","DTEF-1|ETFR-1|TEAD-3|TEF-5|Tcf13r2","TEA domain family member 3","protein-coding"]
["MACS_peak_77237","chr16",94313185,94313896,"+",267.16,"NA","Intergenic","CpG",-14882,"NM_133229",170765,"Mm.42604","NM_133229","ENSMUSG00000022941","Ripply3","Dscr6","ripply3 homolog (zebrafish)","protein-coding"]
["MACS_peak_26773","chr11",69408525,69409540,"+",266.26,"NA","intron (NM_001017426, intron 1 of 22)","intron (NM_001017426, intron 1 of 22)",4643,"NM_001017426",216850,"Mm.261201","NM_001017426","ENSMUSG00000018476","Kdm6b","1700064E03Rik|BC038313|Jmjd3|mKIAA0346","KDM1 lysine (K)-specific demethylase 6B","protein-coding"]
["MACS_peak_190115","chr8",95137075,95137927,"+",264.04,"NA","intron (NM_010631, intron 2 of 19)","intron (NM_010631, intron 2 of 19)",5039,"NM_010631",16582,"Mm.378951","NM_010631","ENSMUSG00000031788","Kifc3","AI325457|BB123200","kinesin family member C3","protein-coding"]
["MACS_peak_121392","chr3",90536648,90537507,"+",262.8,"NA","Intergenic","Intergenic",-4146,"NM_026416",67860,"Mm.331185","NM_026416","ENSMUSG00000074457","S100a16","2300002L21Rik|AI325039|AI663996|DT1P1A7|S100F","S100 calcium binding protein A16","protein-coding"]
["MACS_peak_90202","chr18",38203398,38203991,"+",261.95,"NA","intron (NM_029357, intron 1 of 2)","intron (NM_029357, intron 1 of 2)",6068,"NM_029357",75599,"Mm.36560","NM_029357","ENSMUSG00000051375","Pcdh1","2010005A06Rik|AI585920","protocadherin 1","protein-coding"]
["MACS_peak_170160","chr7",25781430,25782066,"+",261.83,"NA","intron (NM_009465, intron 4 of 19)","intron (NM_009465, intron 4 of 19)",6985,"NM_001190974",26362,"Mm.4128","NM_009465","ENSMUSG00000002602","Axl","AI323647|Ark|Tyro7|Ufo","AXL receptor tyrosine kinase","protein-coding"]
["MACS_peak_99765","chr19",56821859,56822725,"+",260.95,"NA","Intergenic","CpG",-3917,"NM_001002238",83561,"Mm.247541","NM_031387","ENSMUSG00000025081","Tdrd1","MTR-1","tudor domain containing 1","protein-coding"]
["MACS_peak_139809","chr4",151347050,151347528,"+",260.63,"NA","intron (NM_001081557, intron 5 of 23)","intron (NM_001081557, intron 5 of 23)",257719,"NM_001308446",105704528,"Mm.415128","NM_001308446",null,"Gm13090","OTTMUSG00000010356","predicted gene 13090","protein-coding"]
["MACS_peak_30489","chr11",89186794,89187617,"+",260.01,"NA","Intergenic","Intergenic",113364,"NM_001033266",217071,"Mm.342127","NM_001033266","ENSMUSG00000072553","Gm525","-","predicted gene 525","protein-coding"]
["MACS_peak_17517","chr10",81142690,81143347,"+",258.76,"NA","intron (NM_010731, intron 1 of 2)","intron (NM_010731, intron 1 of 2)",6747,"NM_010731",16969,"Mm.20920","NM_010731","ENSMUSG00000035011","Zbtb7a","9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7","zinc finger and BTB domain containing 7a","protein-coding"]
["MACS_peak_94556","chr19",5529341,5530018,"+",258.32,"NA","Intergenic","Intergenic",-19190,"NM_001024560",225861,"Mm.20071","NM_001024560","ENSMUSG00000056185","Snx32","B930037P14Rik|Snx6b","sorting nexin 32","protein-coding"]
["MACS_peak_75799","chr16",59600541,59601087,"+",257.82,"NA","Intergenic","CpG",-36131,"NR_040564",75145,"Mm.399348","NR_040564",null,"4930547E14Rik","-","RIKEN cDNA 4930547E14 gene","ncRNA"]
["MACS_peak_102677","chr2",28527404,28528354,"+",257.81,"NA","intron (NM_001145834, intron 1 of 17)","intron (NM_001145834, intron 1 of 17)",-5585,"NM_001145835",19730,"Mm.5236","NM_009058","ENSMUSG00000026821","Ralgds","Gnds|Rgds|mKIAA1308","ral guanine nucleotide dissociation stimulator","protein-coding"]
["MACS_peak_120142","chr3",84190369,84191302,"+",257.27,"NA","exon (NM_001271728, exon 6 of 12)","exon (NM_001271728, exon 6 of 12)",16197,"NR_036654",624713,"Mm.442604","NR_036654",null,"Gm6525","EG624713","ribosomal protein L36a pseudogene","pseudo"]
["MACS_peak_41815","chr12",70968308,70968748,"+",257.26,"NA","Intergenic","CpG",-6095,"NM_001310595",19167,"Mm.296338","NM_011184","ENSMUSG00000060073","Psma3","Lmpc8","proteasome (prosome, macropain) subunit, alpha type 3","protein-coding"]
["MACS_peak_68361","chr15",86074151,86074943,"+",257,"NA","intron (NM_001205353, intron 1 of 18)","intron (NM_001205353, intron 1 of 18)",15820,"NM_001205353",223752,"Mm.24442","NM_172611","ENSMUSG00000035900","Gramd4","9930016O13","GRAM domain containing 4","protein-coding"]
["MACS_peak_49718","chr13",44733684,44734290,"+",256.98,"NA","intron (NM_001205044, intron 2 of 18)","CpG",2716,"NM_001205043",16468,"Mm.25059","NM_021878","ENSMUSG00000038518","Jarid2","Jmj|jumonji","jumonji, AT rich interactive domain 2","protein-coding"]
["MACS_peak_80440","chr17",27048287,27049343,"+",255.76,"NA","Intergenic","Intergenic",-8489,"NM_080553",16440,"Mm.458106","NM_080553","ENSMUSG00000042644","Itpr3","Ip3r3|Itpr-3","inositol 1,4,5-triphosphate receptor 3","protein-coding"]
["MACS_peak_124891","chr4",8647102,8647745,"+",252.28,"NA","Intergenic","CpG",-42983,"NM_001277149",320790,"Mm.138792","NM_001033395","ENSMUSG00000041235","Chd7","A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis","chromodomain helicase DNA binding protein 7","protein-coding"]
["MACS_peak_93176","chr18",80655301,80656296,"+",251.66,"NA","intron (NM_198429, intron 6 of 9)","intron (NM_198429, intron 6 of 9)",52375,"NM_001164111",18018,"Mm.329560","NM_016791","ENSMUSG00000033016","Nfatc1","2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb","nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1","protein-coding"]
["MACS_peak_32657","chr11",100284253,100284982,"+",251.34,"NA","Intergenic","Intergenic",-14746,"NM_212483",68239,"Mm.158190","NM_212483","ENSMUSG00000053654","Krt42","2410039E07Rik|K17n|Ka22|ecat6","keratin 42","protein-coding"]
["MACS_peak_111001","chr2",145860420,145861105,"+",250.71,"NA","exon (NM_028724, exon 9 of 13)","exon (NM_028724, exon 9 of 13)",-42479,"NM_026425",67877,"Mm.151168","NM_026425","ENSMUSG00000002728","Naa20","1500004D14Rik|2900026I01Rik|AU041458|D2Ertd186e|Nat5","N(alpha)-acetyltransferase 20, NatB catalytic subunit","protein-coding"]
["MACS_peak_175538","chr7",80207743,80208507,"+",250.62,"NA","intron (NM_013659, intron 2 of 14)","intron (NM_013659, intron 2 of 14)",21284,"NM_013659",20352,"Mm.275909","NM_013659","ENSMUSG00000030539","Sema4b","SemC|Semac|mKIAA1745","sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B","protein-coding"]
["MACS_peak_128434","chr4",95161120,95161796,"+",249.63,"NA","Intergenic","CpG",-109236,"NM_010591",16476,"Mm.275071","NM_010591","ENSMUSG00000052684","Jun","AP-1|Junc|c-jun","jun proto-oncogene","protein-coding"]
["MACS_peak_25612","chr11",60935065,60935914,"+",247.55,"NA","intron (NM_008928, intron 1 of 11)","intron (NM_008928, intron 1 of 11)",3432,"NM_008928",26397,"Mm.18494","NM_008928","ENSMUSG00000018932","Map2k3","AW212142|MEK3|MKK3|Prkmk3|mMKK3b","mitogen-activated protein kinase kinase 3","protein-coding"]
["MACS_peak_103558","chr2",30709148,30710022,"+",247.2,"NA","Intergenic","Intergenic",-11625,"NR_037272",100526499,null,"NR_037272","ENSMUSG00000093091","Mir3089","mir-3089|mmu-mir-3089","microRNA 3089","ncRNA"]
["MACS_peak_189471","chr8",90869010,90870116,"+",244.65,"NA","intron (NM_177224, intron 2 of 39)","intron (NM_177224, intron 2 of 39)",40728,"NM_177224",109151,"Mm.100615","NM_177224","ENSMUSG00000056608","Chd9","1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308","chromodomain helicase DNA binding protein 9","protein-coding"]
["MACS_peak_121399","chr3",90586798,90587476,"+",241.14,"NA","Intergenic","Intergenic",-3110,"NM_001195760",628324,"Mm.33816","NM_001195760","ENSMUSG00000094018","S100a2","CaN19|EG628324|S100L","S100 calcium binding protein A2","protein-coding"]
["MACS_peak_115270","chr2",167833286,167834037,"+",241.13,"NA","Intergenic","Intergenic",-98666,"NM_011201",19246,"Mm.277916","NM_011201","ENSMUSG00000027540","Ptpn1","PTP-1B|PTP-HA2|PTP1B","protein tyrosine phosphatase, non-receptor type 1","protein-coding"]
["MACS_peak_205139","chr9",106377030,106377890,"+",241.12,"NA","Intergenic","Intergenic",8828,"NM_153459",235584,"Mm.275584","NM_153459","ENSMUSG00000053716","Dusp7","AU015694|Mkpx|Pyst2","dual specificity phosphatase 7","protein-coding"]
["MACS_peak_120610","chr3",87958353,87959085,"+",240.51,"NA","Intergenic","Intergenic",10026,"NM_007759",12904,"Mm.4757","NM_007759","ENSMUSG00000004885","Crabp2","AI893628|Crabp-2|CrabpII","cellular retinoic acid binding protein II","protein-coding"]
["MACS_peak_69797","chr15",97876252,97876945,"+",238.58,"NA","intron (NM_009504, intron 4 of 9)","intron (NM_009504, intron 4 of 9)",31698,"NM_009504",22337,"Mm.245084","NM_009504","ENSMUSG00000022479","Vdr","Nr1i1","vitamin D receptor","protein-coding"]
["MACS_peak_64188","chr15",74891801,74892589,"+",238.1,"NA","Intergenic","Intergenic",-10491,"NM_025929",67038,"Mm.154566","NM_025929","ENSMUSG00000063522","2010109I03Rik","-","RIKEN cDNA 2010109I03 gene","protein-coding"]
["MACS_peak_131160","chr4",121214757,121215468,"+",237.93,"NA","Intergenic","CpG",-26578,"NM_001081013",109263,"Mm.215745","NM_001081013","ENSMUSG00000049878","Rlf","9230110M18Rik|AI195322|MommeD8","rearranged L-myc fusion sequence","protein-coding"]
["MACS_peak_59941","chr14",76152121,76152684,"+",236.79,"NA","Intergenic","Intergenic",41511,"NM_013745",27275,"Mm.21138","NM_013745","ENSMUSG00000022009","Nufip1","Nufip","nuclear fragile X mental retardation protein interacting protein 1","protein-coding"]
["MACS_peak_161239","chr6",67532941,67533398,"+",236.75,"NA","TTS (NM_020047)","TTS (NM_020047)",2653,"NM_020047",56753,"Mm.439913","NM_020047","ENSMUSG00000051397","Tacstd2","C80403|EGP-1|GA733-1|Ly97|TROP2","tumor-associated calcium signal transducer 2","protein-coding"]
["MACS_peak_46696","chr12",111005594,111006284,"+",236.18,"NA","intron (NR_036598, intron 1 of 2)","intron (NR_036598, intron 1 of 2)",11541,"NR_036598",77878,"Mm.293198","NR_036598",null,"6030440G07Rik","-","RIKEN cDNA 6030440G07 gene","ncRNA"]
["MACS_peak_26774","chr11",69409746,69410481,"+",236.18,"NA","intron (NM_001017426, intron 1 of 22)","CpG",3562,"NM_001017426",216850,"Mm.261201","NM_001017426","ENSMUSG00000018476","Kdm6b","1700064E03Rik|BC038313|Jmjd3|mKIAA0346","KDM1 lysine (K)-specific demethylase 6B","protein-coding"]
["MACS_peak_134185","chr4",134061664,134062659,"+",235.92,"NA","Intergenic","Intergenic",-6291,"NM_001162970",230806,"Mm.240080","NM_001162970","ENSMUSG00000012123","Aim1l","-","absent in melanoma 1-like","protein-coding"]
["MACS_peak_156966","chr5",142442171,142442772,"+",233,"NA","intron (NM_199068, intron 2 of 8)","intron (NM_199068, intron 2 of 8)",-21460,"NM_172725",231855,"Mm.78250","NM_172725","ENSMUSG00000039623","Ap5z1","C330006K01Rik","adaptor-related protein complex 5, zeta 1 subunit","protein-coding"]
["MACS_peak_195332","chr8",124264442,124265119,"+",232.48,"NA","intron (NM_139272, intron 1 of 15)","intron (NM_139272, intron 1 of 15)",33386,"NM_139272",108148,"Mm.33808","NM_139272","ENSMUSG00000089704","Galnt2","AI480629","UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2","protein-coding"]
["MACS_peak_80433","chr17",27038973,27039586,"+",231.91,"NA","Intergenic","Intergenic",10020,"NM_027544",70772,"Mm.440437","NM_027544","ENSMUSG00000048731","Ggnbp1","0610031G08Rik|mdf","gametogenetin binding protein 1","protein-coding"]
["MACS_peak_47404","chr12",112578182,112578928,"+",229.26,"NA","Intergenic","Intergenic",-10229,"NM_198411",70435,"Mm.250193","NM_198411","ENSMUSG00000037679","Inf2","2610204M08Rik|AA589465|AW125550|EG629699","inverted formin, FH2 and WH2 domain containing","protein-coding"]
["MACS_peak_134052","chr4",133607904,133608476,"+",228.74,"NA","3' UTR (NM_001017968, exon 8 of 8)","3' UTR (NM_001017968, exon 8 of 8)",-6022,"NM_018754",55948,"Mm.44482","NM_018754","ENSMUSG00000047281","Sfn","Er|Mme1|Ywhas","stratifin","protein-coding"]
["MACS_peak_148993","chr5",113153028,113153790,"+",228.39,"NA","intron (NM_172884, intron 1 of 7)","intron (NM_172884, intron 1 of 7)",9904,"NM_172884",243219,"Mm.160131","NM_172884","ENSMUSG00000051339","2900026A02Rik","8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671","RIKEN cDNA 2900026A02 gene","protein-coding"]
["MACS_peak_101781","chr2",26506761,26507390,"+",227.38,"NA","Intergenic","Intergenic",3148,"NR_132655",102639736,null,"NR_132655",null,"Gm35978","-","predicted gene, 35978","ncRNA"]
["MACS_peak_180764","chr7",132931232,132931881,"+",226.59,"NA","Intergenic","CpG",-18066,"NM_207302",360216,"Mm.389984","NM_207302","ENSMUSG00000030967","Zranb1","9330160G10Rik|D7Wsu87e|Gm1956|Trabid","zinc finger, RAN-binding domain containing 1","protein-coding"]
["MACS_peak_161608","chr6",72926665,72927347,"+",224.62,"NA","Intergenic","Intergenic",-27027,"NM_019715",74287,"Mm.29194","NM_019715","ENSMUSG00000055239","Kcmf1","1700094M07Rik|Debt91|Pmcf","potassium channel modulatory factor 1","protein-coding"]
["MACS_peak_103557","chr2",30708119,30708683,"+",223.91,"NA","Intergenic","Intergenic",-12809,"NR_037272",100526499,null,"NR_037272","ENSMUSG00000093091","Mir3089","mir-3089|mmu-mir-3089","microRNA 3089","ncRNA"]
["MACS_peak_47579","chr12",112795219,112795876,"+",222.46,"NA","Intergenic","Intergenic",-13428,"NM_145450",217887,"Mm.186678","NM_145450","ENSMUSG00000037594","BC022687","AW050009|C130001I08Rik|Flj20080","cDNA sequence BC022687","protein-coding"]
["MACS_peak_133996","chr4",133494173,133494792,"+",219.7,"NA","intron (NM_001081156, intron 1 of 1)","B1_Mur4|SINE|Alu",4068,"NM_001081156",69539,"Mm.151594","NM_001081156","ENSMUSG00000056596","Trnp1","2300002D11Rik|Trnp","TMF1-regulated nuclear protein 1","protein-coding"]
["MACS_peak_205125","chr9",106358854,106359612,"+",219.64,"NA","Intergenic","Intergenic",-9399,"NM_153459",235584,"Mm.275584","NM_153459","ENSMUSG00000053716","Dusp7","AU015694|Mkpx|Pyst2","dual specificity phosphatase 7","protein-coding"]
["MACS_peak_198598","chr9",43777675,43778426,"+",219.52,"NA","intron (NM_021424, intron 1 of 5)","intron (NM_021424, intron 1 of 5)",33474,"NM_021424",58235,"Mm.335096","NM_021424","ENSMUSG00000032012","Pvrl1","AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|nectin-1","poliovirus receptor-related 1","protein-coding"]
["MACS_peak_137684","chr4",141352621,141353257,"+",218.78,"NA","Intergenic","Intergenic",-15253,"NM_001085513",277743,"Mm.294614","NM_001085513","ENSMUSG00000006218","Fam131c","Gm693","family with sequence similarity 131, member C","protein-coding"]
["MACS_peak_203394","chr9",76566912,76567578,"+",218.45,"NA","Intergenic","CpG",-21441,"NM_001045518",208994,"Mm.256929","NM_001045518","ENSMUSG00000032358","Fam83b","C530008M07Rik|Gm516","family with sequence similarity 83, member B","protein-coding"]
["MACS_peak_118660","chr3",32397530,32398049,"+",218.31,"NA","Intergenic","CpG",-32124,"NM_009517",22401,"Mm.35705","NM_009517","ENSMUSG00000027663","Zmat3","Wig1","zinc finger matrin type 3","protein-coding"]
["MACS_peak_32659","chr11",100286753,100287357,"+",216.35,"NA","Intergenic","Intergenic",-17184,"NM_212483",68239,"Mm.158190","NM_212483","ENSMUSG00000053654","Krt42","2410039E07Rik|K17n|Ka22|ecat6","keratin 42","protein-coding"]
["MACS_peak_47583","chr12",112798095,112798590,"+",216.29,"NA","Intergenic","Intergenic",-10633,"NM_145450",217887,"Mm.186678","NM_145450","ENSMUSG00000037594","BC022687","AW050009|C130001I08Rik|Flj20080","cDNA sequence BC022687","protein-coding"]
["MACS_peak_59629","chr14",70585604,70586312,"+",215.73,"NA","intron (NM_194345, intron 14 of 16)","intron (NM_194345, intron 14 of 16)",8111,"NM_153136",213484,"Mm.34191","NM_153136","ENSMUSG00000045211","Nudt18","BC036718","nudix (nucleoside diphosphate linked moiety X)-type motif 18","protein-coding"]
["MACS_peak_69779","chr15",97839934,97840488,"+",214.42,"NA","intron (NM_001204275, intron 1 of 24)","intron (NM_001204275, intron 1 of 24)",4291,"NM_001204279",56233,"Mm.384027","NM_019572","ENSMUSG00000022475","Hdac7","5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062","histone deacetylase 7","protein-coding"]
["MACS_peak_128362","chr4",88937786,88938384,"+",214.29,"NA","intron (NR_132735, intron 1 of 2)","CpG",3957,"NR_132734",106557447,"Mm.484668","NR_132734",null,"LOC106557447","-","uncharacterized LOC106557447","ncRNA"]
["MACS_peak_179757","chr7",127008414,127009090,"+",213.63,"NA","intron (NM_080638, intron 1 of 14)","intron (NM_080638, intron 1 of 14)",5842,"NM_080638",78388,"Mm.228797","NM_080638","ENSMUSG00000030681","Mvp","2310009M24Rik|LRP|VAULT1","major vault protein","protein-coding"]
["MACS_peak_121077","chr3",89388076,89388805,"+",213.14,"NA","intron (NM_009565, intron 1 of 2)","intron (NM_009565, intron 1 of 2)",-3424,"NR_040403",545539,"Mm.393389","NR_040403","ENSMUSG00000074466","Gm15417","ENSMUSG00000074466|OTTMUSG00000021274","predicted gene 15417","ncRNA"]
["MACS_peak_183045","chr7",144566816,144567199,"+",212.09,"NA","Intergenic","Intergenic",-13278,"NM_001195086",233977,"Mm.490347","NM_001033319","ENSMUSG00000037519","Ppfia1","C030014K08Rik|C87158|LIP.1|LIP1","protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1","protein-coding"]
["MACS_peak_149975","chr5",115001347,115001936,"+",211.85,"NA","Intergenic","Intergenic",-9883,"NM_029012",74585,"Mm.355894","NM_029012","ENSMUSG00000029550","Sppl3","4833416I09Rik|Psl4|Usmg3","signal peptide peptidase 3","protein-coding"]
["MACS_peak_134941","chr4",135570286,135571158,"+",211.17,"NA","intron (NM_001013756, intron 1 of 15)","intron (NM_001013756, intron 1 of 15)",2898,"NM_001013756",230824,"Mm.331972","NM_001013756","ENSMUSG00000037188","Grhl3","AI561912|Get1|Som|Tfcp2l4|ct","grainyhead-like 3 (Drosophila)","protein-coding"]
["MACS_peak_207454","chr9",120010974,120011486,"+",211.09,"NA","Intergenic","CpG",12368,"NM_011724",22437,"Mm.10117","NM_011724","ENSMUSG00000079243","Xirp1","AI415219|Cmya1","xin actin-binding repeat containing 1","protein-coding"]
["MACS_peak_98861","chr19",47314412,47315172,"+",210.89,"NA","intron (NM_008018, intron 7 of 14)","intron (NM_008018, intron 7 of 14)",-41203,"NR_105961",102466782,null,"NR_105961","ENSMUSG00000098786","Mir6995","Gm27576|mmu-mir-6995","microRNA 6995","ncRNA"]
["MACS_peak_198604","chr9",43782914,43783481,"+",210.35,"NA","intron (NM_021424, intron 1 of 5)","intron (NM_021424, intron 1 of 5)",38621,"NM_021424",58235,"Mm.335096","NM_021424","ENSMUSG00000032012","Pvrl1","AI835281|AW549174|Cd111|HIgR|HveC|PRR|PRR1|nectin-1","poliovirus receptor-related 1","protein-coding"]
["MACS_peak_191991","chr8",117116041,117116652,"+",209.85,"NA","intron (NM_001163028, intron 6 of 11)","intron (NM_001163028, intron 6 of 11)",20481,"NM_001163028",63857,"Mm.174133","NM_021486","ENSMUSG00000031845","Bco1","Bcdo|Bcdo1|Bcmo1|CMO1|Cmoi|beta-CD|betaCMOOX","beta-carotene oxygenase 1","protein-coding"]
["MACS_peak_125644","chr4",40844250,40844731,"+",209.76,"NA","intron (NM_022305, intron 1 of 5)","intron (NM_022305, intron 1 of 5)",5648,"NR_039584",100628614,null,"NR_039584","ENSMUSG00000096377","Mir5123","mmu-mir-5123|mu-mir-5123","microRNA 5123","ncRNA"]
["MACS_peak_188516","chr8",84197319,84198042,"+",209.62,"NA","Intergenic","CpG",-10838,"NR_029740",387216,null,"NR_029740","ENSMUSG00000065611","Mir23a","Mirn23a|mir-23a|mmu-mir-23a","microRNA 23a","ncRNA"]
["MACS_peak_115189","chr2",167731018,167731674,"+",209.09,"NA","Intergenic","Intergenic",40169,"NR_015500",329562,"Mm.123101","NM_177851","ENSMUSG00000006462","A530013C23Rik","-","RIKEN cDNA A530013C23 gene","ncRNA"]
["MACS_peak_135988","chr4",137931031,137931685,"+",208.78,"NA","intron (NM_199307, intron 5 of 19)","intron (NM_199307, intron 5 of 19)",-62098,"NM_001256198",230861,"Mm.268903","NM_172703","ENSMUSG00000028760","Eif4g3","1500002J22Rik|4833436O05|4930523M17Rik|G1-419-52|eIF4GII|repro8","eukaryotic translation initiation factor 4 gamma, 3","protein-coding"]
["MACS_peak_70972","chr15",101330358,101330958,"+",208.66,"NA","Intergenic","Intergenic",37446,"NR_033803",77717,"Mm.391998","NR_033803","ENSMUSG00000075408","6030408B16Rik","AI225877","RIKEN cDNA 6030408B16 gene","ncRNA"]
["MACS_peak_65790","chr15",79097592,79097966,"+",208.29,"NA","Intergenic","Intergenic",-11204,"NM_177461",27008,"Mm.196480","NM_177461","ENSMUSG00000033039","Micall1","AI448246|D15Mit260|D15N2e|EST573322|EST820961|MIRab13|mKIAA1668","microtubule associated monooxygenase, calponin and LIM domain containing -like 1","protein-coding"]
["MACS_peak_156948","chr5",142424716,142425449,"+",205.5,"NA","intron (NM_199068, intron 1 of 8)","intron (NM_199068, intron 1 of 8)",23585,"NM_199068",17425,"Mm.24214","NM_010812","ENSMUSG00000056493","Foxk1","A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf","forkhead box K1","protein-coding"]
["MACS_peak_99802","chr19",56934907,56935568,"+",205.49,"NA","intron (NM_001177796, intron 6 of 19)","intron (NM_001177796, intron 6 of 19)",60821,"NM_172840",240675,"Mm.129534","NM_172840","ENSMUSG00000025082","Vwa2","Amaco","von Willebrand factor A domain containing 2","protein-coding"]
["MACS_peak_47141","chr12",112128410,112128989,"+",204.56,"NA","Intergenic","Intergenic",-2181,"NR_029590",387199,null,"NR_029590","ENSMUSG00000065574","Mir203","Mirn203|mir-203|mmu-mir-203","microRNA 203","ncRNA"]
["MACS_peak_139600","chr4",150914176,150914800,"+",203.71,"NA","Intergenic","CpG",-4567,"NM_020569",57320,"Mm.277349","NM_020569","ENSMUSG00000028964","Park7","DJ-1|Dj1","Parkinson disease (autosomal recessive, early onset) 7","protein-coding"]
["MACS_peak_85787","chr17",56554008,56554644,"+",203.67,"NA","promoter-TSS (NR_130128)","promoter-TSS (NR_130128)",61,"NR_130128",100504425,"Mm.384143","NR_130128",null,"Gm20219","Tincr","predicted gene, 20219","ncRNA"]
["MACS_peak_125861","chr4",42949637,42950191,"+",203.42,"NA","Intergenic","CpG",-3180,"NM_019874",56323,"Mm.20437","NM_019874","ENSMUSG00000036052","Dnajb5","1110058L06Rik|AI462558|Hsc40|Hsp40-3","DnaJ (Hsp40) homolog, subfamily B, member 5","protein-coding"]
["MACS_peak_71458","chr15",103000538,103001028,"+",202.2,"NA","Intergenic","Intergenic",-8779,"NM_010465",15425,"Mm.4444","NM_010465","ENSMUSG00000001661","Hoxc6","Hox-3.3|Hox-6.1","homeobox C6","protein-coding"]
["MACS_peak_99233","chr19",53314173,53314615,"+",201.74,"NA","intron (NM_001008542, intron 1 of 5)","CpG",3888,"NM_001008542",17859,"Mm.2154","NM_010847","ENSMUSG00000025025","Mxi1","ENSMUSG00000067085|Gm10197|Mad2|bHLHc11","MAX interactor 1, dimerization protein","protein-coding"]
["MACS_peak_17934","chr10",82795123,82795754,"+",201.31,"NA","Intergenic","Intergenic",-16685,"NR_038042",70003,"Mm.48789","NR_038042","ENSMUSG00000056821","1700028I16Rik","-","RIKEN cDNA 1700028I16 gene","ncRNA"]
["MACS_peak_93446","chr18",82738021,82738641,"+",201.16,"NA","Intergenic","Intergenic",18050,"NR_039572",100628586,null,"NR_039572","ENSMUSG00000092638","Mir5112","mmu-mir-5112|mu-mir-5112","microRNA 5112","ncRNA"]
["MACS_peak_16690","chr10",80075014,80075456,"+",200.8,"NA","intron (NM_183426, intron 4 of 31)","intron (NM_183426, intron 4 of 31)",21216,"NM_001037741",625249,"Mm.332810","NM_008162","ENSMUSG00000075706","Gpx4","GPx-4|GSHPx-4|PHGPx|mtPHGPx|snGPx","glutathione peroxidase 4","protein-coding"]
["MACS_peak_132677","chr4",129231762,129232329,"+",200.67,"NA","intron (NM_001285867, intron 1 of 6)","intron (NM_001285867, intron 1 of 6)",-4134,"NM_001285866",97130,"Mm.331907","NM_001033189","ENSMUSG00000050390","C77080","Kiaa1522|mKIAA1522","expressed sequence C77080","protein-coding"]
["MACS_peak_104747","chr2",32914310,32914905,"+",200.57,"NA","intron (NM_146119, intron 5 of 13)","intron (NM_146119, intron 5 of 13)",38473,"NM_146119",227737,"Mm.301646","NM_146119","ENSMUSG00000026796","Fam129b","9130404D14Rik","family with sequence similarity 129, member B","protein-coding"]
["MACS_peak_42602","chr12",80115490,80116124,"+",199.92,"NA","Intergenic","CpG",-2794,"NM_007564",12192,"Mm.235132","NM_007564","ENSMUSG00000021127","Zfp36l1","AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1","zinc finger protein 36, C3H type-like 1","protein-coding"]
["MACS_peak_91044","chr18",60747600,60748133,"+",199.82,"NA","Intergenic","Intergenic",-26730,"NM_020600",20044,"Mm.43778","NM_020600","ENSMUSG00000024608","Rps14","2600014J02Rik|AL023078","ribosomal protein S14","protein-coding"]
["MACS_peak_32662","chr11",100288463,100289620,"+",199.37,"NA","Intergenic","Intergenic",-19170,"NM_212483",68239,"Mm.158190","NM_212483","ENSMUSG00000053654","Krt42","2410039E07Rik|K17n|Ka22|ecat6","keratin 42","protein-coding"]
["MACS_peak_205307","chr9",107305592,107306288,"+",199.29,"NA","Intergenic","Intergenic",9251,"NM_009895",12700,"Mm.4592","NM_009895",null,"Cish","AI385595|CIS1|Cis|F17|F23","cytokine inducible SH2-containing protein","protein-coding"]
["MACS_peak_169222","chr7",19327131,19327557,"+",198.33,"NA","Intergenic","Intergenic",-17299,"NM_008036",14282,"Mm.248335","NM_008036","ENSMUSG00000003545","Fosb","-","FBJ osteosarcoma oncogene B","protein-coding"]
["MACS_peak_171810","chr7",35128971,35129601,"+",197.99,"NA","Intergenic","Intergenic",9993,"NM_007678",12606,"Mm.349667","NM_007678","ENSMUSG00000034957","Cebpa","C/ebpalpha|CBF-A|Cebp","CCAAT/enhancer binding protein (C/EBP), alpha","protein-coding"]
["MACS_peak_141875","chr4",155894204,155894761,"+",197.78,"NA","intron (NM_207223, intron 1 of 23)","intron (NM_207223, intron 1 of 23)",2607,"NM_207223",140500,"Mm.219591","NM_207223","ENSMUSG00000029033","Acap3","Centb5|Kiaa1716-hp|mKIAA1716","ArfGAP with coiled-coil, ankyrin repeat and PH domains 3","protein-coding"]
["MACS_peak_119775","chr3",65974466,65975045,"+",197.69,"NA","Intergenic","CpG",-16530,"NM_019937",56706,"Mm.175612","NM_019937","ENSMUSG00000027829","Ccnl1","2610030E23Rik|AU018493|Ccnl|ania-6a","cyclin L1","protein-coding"]
["MACS_peak_3424","chr1",86503166,86503766,"+",197.23,"NA","Intergenic","Intergenic",-23270,"NM_008972",19231,"Mm.19187","NM_008972","ENSMUSG00000026238","Ptma","Thym","prothymosin alpha","protein-coding"]
["MACS_peak_138725","chr4",148712560,148713142,"+",195.49,"NA","Intergenic","Intergenic",69534,"NM_001085505",230909,"Mm.332067","NM_001085505","ENSMUSG00000070577","Gm572","b2b1167Clo","predicted gene 572","protein-coding"]
["MACS_peak_63359","chr15",68362354,68362864,"+",194.77,"NA","Intergenic","Intergenic",-21320,"NR_029718",387228,null,"NR_029718","ENSMUSG00000065437","Mir30d","Mirn30d|mir-30d|mmu-mir-30d","microRNA 30d","ncRNA"]
["MACS_peak_133984","chr4",133468127,133468462,"+",194.3,"NA","Intergenic","CpG",-11839,"NM_175307",100342,"Mm.204656","NM_175307","ENSMUSG00000046694","Fam46b","4732473B16Rik|AU045678|AU046069","family with sequence similarity 46, member B","protein-coding"]
["MACS_peak_39866","chr12",8778207,8778811,"+",194.05,"NA","intron (NM_011519, intron 1 of 4)","intron (NM_011519, intron 1 of 4)",7113,"NM_011519",20969,"Mm.2580","NM_011519","ENSMUSG00000020592","Sdc1","AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1","syndecan 1","protein-coding"]
["MACS_peak_1734","chr1",52113609,52114069,"+",193.57,"NA","Intergenic","CpG",-5599,"NM_009283",20846,"Mm.277406","NM_009283","ENSMUSG00000026104","Stat1","2010005J02Rik|AA408197","signal transducer and activator of transcription 1","protein-coding"]
["MACS_peak_43442","chr12",85485598,85486367,"+",193.2,"NA","Intergenic","Intergenic",12081,"NM_010234",14281,"Mm.246513","NM_010234","ENSMUSG00000021250","Fos","D12Rfj1|c-fos|cFos","FBJ osteosarcoma oncogene","protein-coding"]
["MACS_peak_80520","chr17",27142022,27142572,"+",193.08,"NA","Intergenic","Intergenic",-8406,"NM_026063",67267,"Mm.272389","NM_026063","ENSMUSG00000024208","Uqcc2","2900010M23Rik|Cbp6|M19|Mnf1","ubiquinol-cytochrome c reductase complex assembly factor 2","protein-coding"]
["MACS_peak_104496","chr2",32471665,32472029,"+",192.96,"NA","Intergenic","Intergenic",-20377,"NM_146118",227731,"Mm.37395","NM_146118","ENSMUSG00000026819","Slc25a25","1110030N17Rik|MCSC|mKIAA1896","solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25","protein-coding"]
["MACS_peak_205123","chr9",106357524,106358071,"+",192.94,"NA","Intergenic","Intergenic",-10835,"NM_153459",235584,"Mm.275584","NM_153459","ENSMUSG00000053716","Dusp7","AU015694|Mkpx|Pyst2","dual specificity phosphatase 7","protein-coding"]
["MACS_peak_156963","chr5",142439820,142440423,"+",192.34,"NA","intron (NM_199068, intron 2 of 8)","intron (NM_199068, intron 2 of 8)",-23810,"NM_172725",231855,"Mm.78250","NM_172725","ENSMUSG00000039623","Ap5z1","C330006K01Rik","adaptor-related protein complex 5, zeta 1 subunit","protein-coding"]
["MACS_peak_44167","chr12",99393404,99394015,"+",192.13,"NA","intron (NM_183186, intron 1 of 5)","intron (NM_183186, intron 1 of 5)",56365,"NM_183186",71375,"Mm.341972","NM_183186","ENSMUSG00000033713","Foxn3","5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1","forkhead box N3","protein-coding"]
["MACS_peak_120344","chr3",85970893,85971610,"+",191.02,"NA","Intergenic","CpG",31240,"NM_001001650",368202,"Mm.253822","NM_001001650","ENSMUSG00000049013","Prss48","Esspl|Gm1019","protease, serine 48","protein-coding"]
["MACS_peak_102675","chr2",28525445,28526228,"+",190.96,"NA","intron (NM_001145834, intron 1 of 17)","intron (NM_001145834, intron 1 of 17)",-7628,"NM_001145835",19730,"Mm.5236","NM_009058","ENSMUSG00000026821","Ralgds","Gnds|Rgds|mKIAA1308","ral guanine nucleotide dissociation stimulator","protein-coding"]
["MACS_peak_188524","chr8",84203756,84204343,"+",190.46,"NA","Intergenic","Intergenic",-4469,"NR_029740",387216,null,"NR_029740","ENSMUSG00000065611","Mir23a","Mirn23a|mir-23a|mmu-mir-23a","microRNA 23a","ncRNA"]
["MACS_peak_56910","chr14",34363504,34364057,"+",189.49,"NA","Intergenic","Intergenic",-8387,"NM_183278",69134,"Mm.27156","NM_183278","ENSMUSG00000043681","Fam25c","2200001I15Rik|Fam25","family with sequence similarity 25, member C","protein-coding"]
["MACS_peak_43152","chr12",84203692,84204205,"+",188.81,"NA","intron (NM_001163501, intron 1 of 12)","intron (NM_001163501, intron 1 of 12)",-9933,"NM_001163502",238317,"Mm.31256","NM_001163501","ENSMUSG00000042507","Elmsan1","9430029N19Rik|C130039O16Rik|Gm260","ELM2 and Myb/SANT-like domain containing 1","protein-coding"]
["MACS_peak_44166","chr12",99392905,99393398,"+",188.66,"NA","intron (NM_183186, intron 1 of 5)","CpG",56923,"NM_183186",71375,"Mm.341972","NM_183186","ENSMUSG00000033713","Foxn3","5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1","forkhead box N3","protein-coding"]
["MACS_peak_73980","chr16",26371360,26371919,"+",188.54,"NA","5' UTR (NM_016674, exon 1 of 4)","5' UTR (NM_016674, exon 1 of 4)",200,"NM_016674",12737,"Mm.289441","NM_016674","ENSMUSG00000022512","Cldn1","AI596271","claudin 1","protein-coding"]
["MACS_peak_168899","chr7",16845414,16845886,"+",188.34,"NA","intron (NM_001252458, intron 2 of 18)","intron (NM_001252458, intron 2 of 18)",2585,"NM_178900",101540,"Mm.1881","NM_178900","ENSMUSG00000041187","Prkd2","AI325941|PKD2","protein kinase D2","protein-coding"]
["MACS_peak_73375","chr16",18686901,18687345,"+",187.93,"NA","Intergenic","Intergenic",-57185,"NM_213614",18951,"Mm.20365","NM_213614","ENSMUSG00000072214","2005-09-01","Cdcrel-1|Cdcrel1|Pnutl1","septin 5","protein-coding"]
["MACS_peak_161960","chr6",83456493,83457379,"+",187.79,"NA","Intergenic","CpG",15181,"NR_028382",320775,"Mm.434334","NR_028382","ENSMUSG00000051844","B230319C09Rik","-","RIKEN cDNA B230319C09 gene","ncRNA"]
["MACS_peak_12016","chr10",20170307,20171051,"+",187.5,"NA","intron (NM_001198635, intron 1 of 17)","intron (NM_001198635, intron 1 of 17)",21759,"NM_001198635",17761,"Mm.20928","NM_008635","ENSMUSG00000019996","Map7","E-MAP-115|MAP-7|Mtap7|R75000|mshi|mste|ste","microtubule-associated protein 7","protein-coding"]
["MACS_peak_58795","chr14",63982854,63983553,"+",187.28,"NA","intron (NM_026359, intron 2 of 3)","intron (NM_026359, intron 2 of 3)",4577,"NM_026359",67750,"Mm.33864","NM_026359","ENSMUSG00000021961","4930578I06Rik","AI429111","RIKEN cDNA 4930578I06 gene","protein-coding"]
["MACS_peak_33601","chr11",103003162,103003689,"+",187.24,"NA","intron (NM_026551, intron 1 of 4)","intron (NM_026551, intron 1 of 4)",-3504,"NR_105896",102466988,null,"NR_105896","ENSMUSG00000098613","Mir6931","Gm27303|mmu-mir-6931","microRNA 6931","ncRNA"]
["MACS_peak_63132","chr15",61987631,61988354,"+",187.09,"NA","exon (NM_001177353, exon 2 of 3)","exon (NM_001177353, exon 2 of 3)",2651,"NM_001177352",17869,"Mm.2444","NM_010849","ENSMUSG00000022346","Myc","AU016757|Myc2|Niard|Nird|bHLHe39","myelocytomatosis oncogene","protein-coding"]
["MACS_peak_133924","chr4",133379026,133379517,"+",186.52,"NA","intron (NM_016981, intron 1 of 11)","intron (NM_016981, intron 1 of 11)",9495,"NR_039582",100628620,null,"NR_039582","ENSMUSG00000092745","Mir5122","mmu-mir-5122|mu-mir-5122","microRNA 5122","ncRNA"]
["MACS_peak_47575","chr12",112792802,112793447,"+",186.49,"NA","Intergenic","Intergenic",-15851,"NM_145450",217887,"Mm.186678","NM_145450","ENSMUSG00000037594","BC022687","AW050009|C130001I08Rik|Flj20080","cDNA sequence BC022687","protein-coding"]
["MACS_peak_125688","chr4",41063443,41064130,"+",186.28,"NA","Intergenic","Intergenic",-15650,"NM_007473",11832,"Mm.8728","NM_007473","ENSMUSG00000028427","Aqp7","AQP7L|AQPap","aquaporin 7","protein-coding"]
["MACS_peak_118659","chr3",32396897,32397528,"+",185.5,"NA","Intergenic","CpG",-31547,"NM_009517",22401,"Mm.35705","NM_009517","ENSMUSG00000027663","Zmat3","Wig1","zinc finger matrin type 3","protein-coding"]
["MACS_peak_100573","chr2",9877182,9877737,"+",185.05,"NA","exon (NM_008091, exon 2 of 6)","exon (NM_008091, exon 2 of 6)",1141,"NM_008091",14462,"Mm.313866","NM_008091","ENSMUSG00000015619","Gata3","Gata-3|jal","GATA binding protein 3","protein-coding"]
["MACS_peak_174954","chr7",73618419,73618991,"+",184.45,"NA","Intergenic","CpG",-60310,"NR_037569",69170,"Mm.34539","NR_037569","ENSMUSG00000098496","1810026B05Rik","-","RIKEN cDNA 1810026B05 gene","ncRNA"]
["MACS_peak_182815","chr7",143832018,143832606,"+",184.29,"NA","intron (NM_007856, intron 2 of 8)","intron (NM_007856, intron 2 of 8)",9145,"NM_007856",13360,"Mm.249342","NM_007856","ENSMUSG00000058454","Dhcr7","AA409147","7-dehydrocholesterol reductase","protein-coding"]
["MACS_peak_183568","chr8",4678255,4678842,"+",183.79,"NA","Intergenic","CpG",65378,"NM_145591",233987,"Mm.102799","NM_145591",null,"Zfp958","-","zinc finger protein 958","protein-coding"]
["MACS_peak_177007","chr7",99664447,99665089,"+",183.47,"NA","intron (NM_175316, intron 10 of 13)","intron (NM_175316, intron 10 of 13)",-23219,"NR_039544",100628570,null,"NR_039544","ENSMUSG00000093311","Mir3965","mmu-mir-3965|mu-mir-3965","microRNA 3965","ncRNA"]
["MACS_peak_34406","chr11",106666252,106666790,"+",183.31,"NA","intron (NM_001305158, intron 13 of 14)","MER20|DNA|hAT-Charlie",48760,"NM_001305158",18613,"Mm.343951","NM_008816","ENSMUSG00000020717","Pecam1","C85791|Cd31|PECAM-1|Pecam","platelet/endothelial cell adhesion molecule 1","protein-coding"]
["MACS_peak_198351","chr9",43128892,43129347,"+",183.12,"NA","intron (NM_011139, intron 10 of 12)","intron (NM_011139, intron 10 of 12)",-12549,"NM_001034863",235300,"Mm.261326","NM_001034863","ENSMUSG00000048503","Tmem136","AA396355|Gm184","transmembrane protein 136","protein-coding"]
["MACS_peak_2636","chr1",74298420,74299084,"+",182.04,"NA","intron (NM_027154, intron 1 of 11)","intron (NM_027154, intron 1 of 11)",5584,"NM_027154",69660,"Mm.261182","NM_027154","ENSMUSG00000006301","Tmbim1","2310061B02Rik|AA960455|AU024746|C78899|RECS1|Tmbib1|mKIAA4161","transmembrane BAX inhibitor motif containing 1","protein-coding"]
["MACS_peak_20080","chr10",126935274,126935746,"+",181.65,"NA","Intergenic","Intergenic",-34139,"NM_001159559",68876,"Mm.276769","NM_026858","ENSMUSG00000025436","Xrcc6bp1","1110068E08Rik|2410012H02Rik","XRCC6 binding protein 1","protein-coding"]
["MACS_peak_71860","chr16",5136040,5136802,"+",180.87,"NA","Intergenic","Intergenic",-3940,"NM_008909",19041,"Mm.266875","NM_008909","ENSMUSG00000039457","Ppl","AW553870","periplakin","protein-coding"]
["MACS_peak_81622","chr17",29154325,29155003,"+",180.68,"NA","Intergenic","Intergenic",19608,"NM_001002786",442827,"Mm.440341","NM_001002786","ENSMUSG00000064147","Rab44","9830134C10Rik","RAB44, member RAS oncogene family","protein-coding"]
["MACS_peak_101811","chr2",26553716,26554343,"+",180.34,"NA","Intergenic","Intergenic",-27027,"NM_178444",353156,"Mm.268933","NM_178444","ENSMUSG00000026921","Egfl7","VE-statin|Zneu1","EGF-like domain 7","protein-coding"]
["MACS_peak_141594","chr4",155129967,155130619,"+",180.28,"NA","intron (NM_001081100, intron 12 of 13)","intron (NM_001081100, intron 12 of 13)",43716,"NM_001081100",76866,"Mm.200590","NM_001081100","ENSMUSG00000029049","Morn1","2900057D20Rik|4930417P05Rik|AU042805","MORN repeat containing 1","protein-coding"]
["MACS_peak_198830","chr9",44480106,44480509,"+",179.93,"NA","Intergenic","Intergenic",-18829,"NM_030256",80288,"Mm.370270","NM_030256","ENSMUSG00000063382","Bcl9l","B9L|BC003321|BCL9-2|DLNB11","B cell CLL/lymphoma 9-like","protein-coding"]
["MACS_peak_197605","chr9",31279657,31280206,"+",179.66,"NA","Intergenic","Intergenic",8530,"NM_001101597",638580,"Mm.373655","NM_001101597",null,"Gm7244","EG638580","predicted gene 7244","protein-coding"]
["MACS_peak_71315","chr15",102255549,102256182,"+",179.21,"NA","intron (NM_011244, intron 2 of 9)","intron (NM_011244, intron 2 of 9)",1657,"NM_011244",19411,"Mm.1273","NM_011244","ENSMUSG00000001288","Rarg","Nr1b3|RAR-gamma|RARD|RARgamma2","retinoic acid receptor, gamma","protein-coding"]
["MACS_peak_188517","chr8",84198190,84198611,"+",179.02,"NA","Intergenic","Intergenic",-10118,"NR_029740",387216,null,"NR_029740","ENSMUSG00000065611","Mir23a","Mirn23a|mir-23a|mmu-mir-23a","microRNA 23a","ncRNA"]
["MACS_peak_54345","chr13",111772396,111772804,"+",178.59,"NA","exon (NM_011945, exon 3 of 20)","exon (NM_011945, exon 3 of 20)",36383,"NM_011945",26401,"Mm.15918","NM_011945","ENSMUSG00000021754","Map3k1","MAPKKK1|MEKK1|Mekk","mitogen-activated protein kinase kinase kinase 1","protein-coding"]
["MACS_peak_125082","chr4",11675629,11676276,"+",178.47,"NA","Intergenic","Intergenic",-28495,"NM_010276",14579,"Mm.247486","NM_010276","ENSMUSG00000028214","Gem","AV020497","GTP binding protein (gene overexpressed in skeletal muscle)","protein-coding"]
["MACS_peak_33316","chr11",102211351,102211818,"+",177.79,"NA","intron (NM_001077696, intron 3 of 26)","MIR3|SINE|MIR",18566,"NR_106179",102465892,null,"NR_106179","ENSMUSG00000098863","Mir8101","Gm27705|mmu-mir-8101","microRNA 8101","ncRNA"]
["MACS_peak_113733","chr2",164432504,164433079,"+",177.77,"NA","intron (NM_011521, intron 1 of 4)","intron (NM_011521, intron 1 of 4)",10397,"NM_011521",20971,"Mm.3815","NM_011521","ENSMUSG00000017009","Sdc4","AA959608|AW108331|S4|Synd4|ryudocan|syndecan-4","syndecan 4","protein-coding"]
["MACS_peak_152867","chr5",124046712,124047255,"+",177.72,"NA","Intergenic","Intergenic",-14723,"NM_177876",330192,"Mm.4079","NM_177876","ENSMUSG00000066278","Vps37b","2300007F24Rik|AI415429|BC026744","vacuolar protein sorting 37B (yeast)","protein-coding"]
["MACS_peak_32665","chr11",100290885,100291552,"+",177.61,"NA","Intergenic","Intergenic",-21347,"NM_212483",68239,"Mm.158190","NM_212483","ENSMUSG00000053654","Krt42","2410039E07Rik|K17n|Ka22|ecat6","keratin 42","protein-coding"]
["MACS_peak_142362","chr5",23418269,23418723,"+",177.31,"NA","Intergenic","CpG",15857,"NR_040469",269630,"Mm.425231","NR_040469","ENSMUSG00000073147","5031425E22Rik","-","RIKEN cDNA 5031425E22 gene","ncRNA"]
["MACS_peak_94259","chr19",4720668,4721672,"+",176.66,"NA","intron (NM_021287, intron 2 of 36)","intron (NM_021287, intron 2 of 36)",9947,"NM_021287",20743,"Mm.329668","NM_021287","ENSMUSG00000067889","Sptbn2","Spnb3|mKIAA0302","spectrin beta, non-erythrocytic 2","protein-coding"]
["MACS_peak_115229","chr2",167776483,167776948,"+",176.65,"NA","Intergenic","MIR|SINE|MIR",85538,"NR_015500",329562,"Mm.123101","NM_177851","ENSMUSG00000006462","A530013C23Rik","-","RIKEN cDNA A530013C23 gene","ncRNA"]
["MACS_peak_47580","chr12",112796486,112797123,"+",175.61,"NA","Intergenic","Intergenic",-12171,"NM_145450",217887,"Mm.186678","NM_145450","ENSMUSG00000037594","BC022687","AW050009|C130001I08Rik|Flj20080","cDNA sequence BC022687","protein-coding"]
["MACS_peak_36245","chr11",115904728,115905386,"+",175.57,"NA","intron (NM_183259, intron 1 of 2)","intron (NM_183259, intron 1 of 2)",4918,"NM_183259",66528,"Mm.275740","NM_183259","ENSMUSG00000048442","Smim5","2210020M01Rik","small integral membrane protein 5","protein-coding"]
["MACS_peak_13458","chr10",59241867,59242372,"+",174.82,"NA","Intergenic","RMER13B|LTR|ERVK",20197,"NM_172939",268301,"Mm.3036","NM_172939","ENSMUSG00000098188","Sowahc","4921515A04Rik|9430099J10Rik|Ankrd57|C820004L04Rik","sosondowah ankyrin repeat domain family member C","protein-coding"]
["MACS_peak_178138","chr7",112247215,112247824,"+",174.73,"NA","intron (NM_001193305, intron 2 of 25)","intron (NM_001193305, intron 2 of 25)",21683,"NM_001193305",320878,"Mm.52312","NM_177282","ENSMUSG00000038244","Mical2","5330438E18Rik|9530064J02|MICAL-2|mKIAA0750","microtubule associated monooxygenase, calponin and LIM domain containing 2","protein-coding"]
["MACS_peak_131551","chr4",124798003,124798563,"+",174.69,"NA","exon (NM_008385, exon 22 of 24)","exon (NM_008385, exon 22 of 24)",-4266,"NM_008636",17764,"Mm.272397","NM_008636","ENSMUSG00000028890","Mtf1","MTF-1|Thyls","metal response element binding transcription factor 1","protein-coding"]
["MACS_peak_153344","chr5",125141359,125141893,"+",174.62,"NA","intron (NM_011424, intron 1 of 46)","intron (NM_011424, intron 1 of 46)",37588,"NM_001253905",20602,"Mm.278646","NM_011424","ENSMUSG00000029478","Ncor2","N-CoR|SMRT|SMRTe","nuclear receptor co-repressor 2","protein-coding"]
["MACS_peak_94732","chr19",5810499,5811295,"+",174.35,"NA","Intergenic","Intergenic",-8226,"NR_002847",72289,"Mm.298256","NR_002847","ENSMUSG00000092341","Malat1","2210401K01Rik|9430072K23Rik|AI647968|Neat2","metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)","ncRNA"]
["MACS_peak_55734","chr14",25599797,25600520,"+",174.32,"NA","intron (NM_001310666, intron 6 of 23)","intron (NM_001310666, intron 6 of 23)",-3355,"NM_001309430",100188919,"Mm.473810","NM_001309430",null,"Israa","-","immune system released activating agent","protein-coding"]
["MACS_peak_153337","chr5",125134771,125135187,"+",174.13,"NA","intron (NM_011424, intron 1 of 46)","intron (NM_011424, intron 1 of 46)",44235,"NM_001253905",20602,"Mm.278646","NM_011424","ENSMUSG00000029478","Ncor2","N-CoR|SMRT|SMRTe","nuclear receptor co-repressor 2","protein-coding"]
["MACS_peak_36454","chr11",116254020,116254453,"+",173.78,"NA","intron (NM_146032, intron 9 of 15)","intron (NM_146032, intron 9 of 15)",-16145,"NM_025276",14027,"Mm.293683","NM_025276","ENSMUSG00000034282","Evpl","-","envoplakin","protein-coding"]
["MACS_peak_134056","chr4",133613398,133614046,"+",173.39,"NA","intron (NM_001017968, intron 4 of 7)","intron (NM_001017968, intron 4 of 7)",-11554,"NM_018754",55948,"Mm.44482","NM_018754","ENSMUSG00000047281","Sfn","Er|Mme1|Ywhas","stratifin","protein-coding"]
["MACS_peak_93150","chr18",80608499,80609020,"+",173.36,"NA","intron (NM_198429, intron 9 of 9)","intron (NM_198429, intron 9 of 9)",-64213,"NR_028424",100039348,"Mm.254722","NR_028424",null,"Gm2176","A430076E10Rik","glucosamine-6-phosphate deaminase 1 pseudogene","pseudo"]
["MACS_peak_157156","chr5",142794369,142795068,"+",172.98,"NA","intron (NM_001122730, intron 2 of 27)","intron (NM_001122730, intron 2 of 27)",22669,"NM_178242",231861,"Mm.354649","NM_178242","ENSMUSG00000039477","Tnrc18","BC025631|EG381742|Zfp469","trinucleotide repeat containing 18","protein-coding"]
["MACS_peak_137256","chr4",140699439,140700043,"+",172.86,"NA","Intergenic","Intergenic",-1732,"NM_173867",108911,"Mm.253","NM_173867","ENSMUSG00000040945","Rcc2","2610510H01Rik|2610529N02Rik|AA536646|AA675016|Td60|mKIAA1470","regulator of chromosome condensation 2","protein-coding"]
["MACS_peak_154985","chr5",135892665,135893191,"+",172.63,"NA","Intergenic","Intergenic",5009,"NM_013560",15507,"Mm.13849","NM_013560","ENSMUSG00000004951","Hspb1","27kDa|Hsp25","heat shock protein 1","protein-coding"]
["MACS_peak_125048","chr4",11147252,11147760,"+",172.41,"NA","Intergenic","Intergenic",-8935,"NM_001199105",60599,"Mm.393018","NM_021897","ENSMUSG00000028211","Trp53inp1","2700057G22Rik|SIP|SIP18|SIP27|Stinp|Teap","transformation related protein 53 inducible nuclear protein 1","protein-coding"]
["MACS_peak_157588","chr5",144318323,144318957,"+",172.37,"NA","intron (NM_025833, intron 3 of 13)","intron (NM_025833, intron 3 of 13)",-39283,"NR_102374",100579137,null,"NR_102372","ENSMUSG00000104600","Dmr","-","Dmrt1 related","ncRNA"]
["MACS_peak_132494","chr4",128737809,128738303,"+",172.31,"NA","intron (NM_001195083, intron 1 of 6)","intron (NM_001195083, intron 1 of 6)",10485,"NM_001195083",54383,"Mm.473738","NM_018774","ENSMUSG00000028796","Phc2","A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36","polyhomeotic-like 2 (Drosophila)","protein-coding"]
["MACS_peak_162803","chr6",88074911,88075462,"+",172.1,"NA","Intergenic","Intergenic",-9287,"NM_133933",103963,"Mm.188544","NM_133933","ENSMUSG00000030062","Rpn1","AU018702|D6Wsu137e|Rpn-1","ribophorin I","protein-coding"]
["MACS_peak_57690","chr14",54574224,54574789,"+",172.08,"NA","intron (NM_010590, intron 1 of 7)","intron (NM_010590, intron 1 of 7)",3155,"NM_010590",16475,"Mm.100253","NM_010590","ENSMUSG00000022178","Ajuba","Jub","ajuba LIM protein","protein-coding"]
["MACS_peak_181753","chr7",139971494,139971976,"+",171.93,"NA","TTS (NM_001033465)","TTS (NM_001033465)",7020,"NM_001033465",381933,"Mm.389985","NM_001033465","ENSMUSG00000073795","6430531B16Rik","Gm1093","RIKEN cDNA 6430531B16 gene","protein-coding"]
["MACS_peak_124939","chr4",8876502,8876911,"+",171.61,"NA","Intergenic","Intergenic",186300,"NM_001277149",320790,"Mm.138792","NM_001033395","ENSMUSG00000041235","Chd7","A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis","chromodomain helicase DNA binding protein 7","protein-coding"]
["MACS_peak_81538","chr17",28930659,28931068,"+",171.61,"NA","Intergenic","Intergenic",11399,"NM_153390",69307,"Mm.107605","NM_153390",null,"Pxt1","1700001G18Rik|Stepp","peroxisomal, testis specific 1","protein-coding"]
["MACS_peak_15261","chr10",75647888,75648465,"+",171.14,"NA","exon (NM_172549, exon 35 of 37)","exon (NM_172549, exon 35 of 37)",-4168,"NM_027890",71733,"Mm.247956","NM_027890","ENSMUSG00000006342","Susd2","1200011D11Rik","sushi domain containing 2","protein-coding"]
["MACS_peak_70975","chr15",101332423,101333055,"+",171.06,"NA","Intergenic","Intergenic",-36613,"NR_035462",100316694,null,"NR_035462","ENSMUSG00000088459","Mir1941","mmu-mir-1941","microRNA 1941","ncRNA"]
["MACS_peak_69025","chr15",89177000,89177514,"+",170.74,"NA","intron (NM_138749, intron 1 of 37)","intron (NM_138749, intron 1 of 37)",-3306,"NM_001159521",140570,"Mm.267514","NM_138749","ENSMUSG00000036606","Plxnb2","Debt|plexin-B2","plexin B2","protein-coding"]
["MACS_peak_65619","chr15",78845860,78846410,"+",170.53,"NA","intron (NM_027219, intron 1 of 2)","intron (NM_027219, intron 1 of 2)",3488,"NM_027219",104445,"Mm.307488","NM_027219","ENSMUSG00000049521","Cdc42ep1","1810058K22Rik|AA980734|Borg5|CEP1|MSE55","CDC42 effector protein (Rho GTPase binding) 1","protein-coding"]
["MACS_peak_134058","chr4",133614861,133615522,"+",170.38,"NA","exon (NM_001017968, exon 3 of 8)","exon (NM_001017968, exon 3 of 8)",-13023,"NM_018754",55948,"Mm.44482","NM_018754","ENSMUSG00000047281","Sfn","Er|Mme1|Ywhas","stratifin","protein-coding"]
["MACS_peak_106814","chr2",72297695,72298100,"+",170.36,"NA","intron (NM_178084, intron 1 of 9)","intron (NM_178084, intron 1 of 9)",12196,"NM_178084",65964,"Mm.304143","NM_023057","ENSMUSG00000004085","Zak","AV006891|B230120H23Rik|MLTK|MLTKalpha|MLTKbeta","sterile alpha motif and leucine zipper containing kinase AZK","protein-coding"]
["MACS_peak_205128","chr9",106360957,106361400,"+",170.2,"NA","Intergenic","Intergenic",-7454,"NM_153459",235584,"Mm.275584","NM_153459","ENSMUSG00000053716","Dusp7","AU015694|Mkpx|Pyst2","dual specificity phosphatase 7","protein-coding"]
["MACS_peak_186794","chr8",69850869,69851510,"+",169.65,"NA","intron (NM_001024954, intron 1 of 7)","intron (NM_001024954, intron 1 of 7)",18485,"NM_001024954",80720,"Mm.210823","NM_030555","ENSMUSG00000031860","Pbx4","2410015M21Rik|AI429113|AW045266","pre B cell leukemia homeobox 4","protein-coding"]
["MACS_peak_195276","chr8",124087922,124088580,"+",169.53,"NA","Intergenic","Intergenic",64778,"NM_001029876",382038,"Mm.334891","NM_001029876","ENSMUSG00000031976","Urb2","C77575|mKIAA0133","URB2 ribosome biogenesis 2 homolog (S. cerevisiae)","protein-coding"]
["MACS_peak_175524","chr7",80191259,80191879,"+",169.47,"NA","intron (NM_013659, intron 1 of 14)","intron (NM_013659, intron 1 of 14)",4728,"NM_013659",20352,"Mm.275909","NM_013659","ENSMUSG00000030539","Sema4b","SemC|Semac|mKIAA1745","sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B","protein-coding"]
["MACS_peak_85785","chr17",56552632,56553095,"+",169.3,"NA","non-coding (NR_130128, exon 3 of 4)","non-coding (NR_130128, exon 3 of 4)",1524,"NR_130128",100504425,"Mm.384143","NR_130128",null,"Gm20219","Tincr","predicted gene, 20219","ncRNA"]
["MACS_peak_37090","chr11",117333909,117334511,"+",169.14,"NA","intron (NM_001113488, intron 1 of 9)","intron (NM_001113488, intron 1 of 9)",1897,"NM_001113488",53860,"Mm.38450","NM_017380","ENSMUSG00000059248","2009-09-01","MSF1|Msf|PNUTL4|Sint1","septin 9","protein-coding"]
["MACS_peak_70970","chr15",101328204,101328640,"+",168.55,"NA","Intergenic","Intergenic",35210,"NR_033803",77717,"Mm.391998","NR_033803","ENSMUSG00000075408","6030408B16Rik","AI225877","RIKEN cDNA 6030408B16 gene","ncRNA"]
["MACS_peak_134051","chr4",133607068,133607777,"+",168.48,"NA","3' UTR (NM_001017968, exon 8 of 8)","3' UTR (NM_001017968, exon 8 of 8)",-5254,"NM_018754",55948,"Mm.44482","NM_018754","ENSMUSG00000047281","Sfn","Er|Mme1|Ywhas","stratifin","protein-coding"]
["MACS_peak_127394","chr4",57156647,57157138,"+",168.39,"NA","Intergenic","Intergenic",-13736,"NM_019427",54357,"Mm.28217","NM_019427","ENSMUSG00000028434","Epb41l4b","6430543G08Rik|AA589614|AU021054|BB007528|D4Ertd346e|Ehm2|Epb4.1l4b|Lulu2","erythrocyte membrane protein band 4.1 like 4b","protein-coding"]
["MACS_peak_196093","chr8",126685214,126685736,"+",168.3,"NA","Intergenic","Intergenic",-92039,"NM_001164598",270110,"Mm.334918","NM_001164598","ENSMUSG00000051495","Irf2bp2","E130305N23Rik|IRF-2BP2","interferon regulatory factor 2 binding protein 2","protein-coding"]
["MACS_peak_114327","chr2",165820443,165821392,"+",168.06,"NA","intron (NM_001291158, intron 12 of 23)","intron (NM_001291158, intron 12 of 23)",37256,"NM_001252585",228880,"Mm.227598","NM_027230","ENSMUSG00000039671","Zmynd8","1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7","zinc finger, MYND-type containing 8","protein-coding"]
["MACS_peak_49453","chr13",42049427,42049902,"+",167.94,"NA","Intergenic","CpG",-2357,"NM_007772",110521,"Mm.4808","NM_007772","ENSMUSG00000021366","Hivep1","Cryabp1","human immunodeficiency virus type I enhancer binding protein 1","protein-coding"]
["MACS_peak_74251","chr16",30596925,30597378,"+",167.33,"NA","Intergenic","Intergenic",-2572,"NM_177632",224093,"Mm.28244","NM_177632","ENSMUSG00000046546","Fam43a","Tuf1","family with sequence similarity 43, member A","protein-coding"]
["MACS_peak_171544","chr7",31208238,31208687,"+",167.08,"NA","Intergenic","CpG",46104,"NR_046062",100038516,"Mm.387223","NR_046062","ENSMUSG00000100985","Gm10640","EG668322|ENSMUSG00000074193","predicted gene 10640","ncRNA"]
["MACS_peak_32710","chr11",100386201,100386933,"+",166.89,"NA","intron (NM_010593, intron 1 of 13)","intron (NM_010593, intron 1 of 13)",11223,"NM_010593",16480,"Mm.299774","NM_010593","ENSMUSG00000001552","Jup","Ctnng|D930025P04Rik|PG","junction plakoglobin","protein-coding"]
["MACS_peak_144043","chr5",34535842,34536479,"+",166.14,"NA","intron (NM_011893, intron 1 of 12)","intron (NM_011893, intron 1 of 12)",-7205,"NM_001145858",24055,"Mm.5012","NM_011893","ENSMUSG00000054520","Sh3bp2","3BP2","SH3-domain binding protein 2","protein-coding"]
["MACS_peak_42444","chr12",78911660,78912123,"+",165.53,"NA","Intergenic","Intergenic",-4953,"NM_013738",27260,"Mm.103380","NM_013738","ENSMUSG00000021118","Plek2","-","pleckstrin 2","protein-coding"]
["MACS_peak_6349","chr1",131751091,131751617,"+",165.4,"NA","intron (NM_177243, intron 2 of 20)","intron (NM_177243, intron 2 of 20)",7332,"NM_177243",320718,"Mm.482704","NM_177243","ENSMUSG00000042268","Slc26a9","E030002L01Rik","solute carrier family 26, member 9","protein-coding"]
["MACS_peak_29090","chr11",79703990,79704472,"+",164.92,"NA","Intergenic","CpG",-7738,"NR_029579",387188,null,"NR_029579","ENSMUSG00000065395","Mir193a","Mir193|Mirn193|mir-193a|mmu-mir-193|mmu-mir-193a","microRNA 193a","ncRNA"]
["MACS_peak_14811","chr10",68136401,68136924,"+",164.92,"NA","intron (NM_023598, intron 4 of 9)","intron (NM_023598, intron 4 of 9)",142064,"NM_023598",71371,"Mm.440357","NM_023598","ENSMUSG00000019947","Arid5b","4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta","AT rich interactive domain 5B (MRF1-like)","protein-coding"]
["MACS_peak_179930","chr7",127691490,127691975,"+",164.78,"NA","Intergenic","Intergenic",-16755,"NR_030428",791073,null,"NR_030428","ENSMUSG00000076454","Mir762","Mirn762|mir-762|mmu-mir-762","microRNA 762","ncRNA"]
["MACS_peak_95000","chr19",6308321,6308850,"+",164.6,"NA","intron (NM_001033342, intron 1 of 36)","intron (NM_001033342, intron 1 of 36)",2128,"NM_001033342",240505,"Mm.329622","NM_001033342","ENSMUSG00000024769","Cdc42bpg","BC046418|MRCKgamma","CDC42 binding protein kinase gamma (DMPK-like)","protein-coding"]
["MACS_peak_197944","chr9",37248343,37248885,"+",164.46,"NA","intron (NM_001145960, intron 1 of 18)","intron (NM_001145960, intron 1 of 18)",7124,"NM_020258",56857,"Mm.440037","NM_020258","ENSMUSG00000032122","Slc37a2","G3PP|Slc37a1|cI-2|ci2","solute carrier family 37 (glycerol-3-phosphate transporter), member 2","protein-coding"]
["MACS_peak_95691","chr19",9106248,9106866,"+",164.32,"NA","Intergenic","Intergenic",-18601,"NM_011681",22287,"Mm.2258","NM_011681","ENSMUSG00000024653","Scgb1a1","CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg","secretoglobin, family 1A, member 1 (uteroglobin)","protein-coding"]
["MACS_peak_28309","chr11",76478724,76479544,"+",164.27,"NA","exon (NM_198895, exon 4 of 23)","exon (NM_198895, exon 4 of 23)",-10669,"NM_001291186",109934,"Mm.258939","NM_198018","ENSMUSG00000017631","Abr","-","active BCR-related gene","protein-coding"]
["MACS_peak_143544","chr5",32120876,32121331,"+",163.94,"NA","Intergenic","Intergenic",-15369,"NM_008037",14284,"Mm.24684","NM_008037","ENSMUSG00000029135","Fosl2","Fra-2","fos-like antigen 2","protein-coding"]
["MACS_peak_53695","chr13",98296527,98297044,"+",163.82,"NA","Intergenic","MLTR11B|LTR|ERVK",20182,"NM_145455",218490,"Mm.371688","NM_145455","ENSMUSG00000021660","Btf3","1700054E11Rik","basic transcription factor 3","protein-coding"]
["MACS_peak_94734","chr19",5817700,5818251,"+",163.44,"NA","Intergenic","Intergenic",-15304,"NR_002847",72289,"Mm.298256","NR_002847","ENSMUSG00000092341","Malat1","2210401K01Rik|9430072K23Rik|AI647968|Neat2","metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)","ncRNA"]
["MACS_peak_161522","chr6",72551068,72551574,"+",162.23,"NA","intron (NM_001271395, intron 1 of 9)","intron (NM_001271395, intron 1 of 9)",1674,"NM_001271395",12332,"Mm.18626","NM_007599","ENSMUSG00000056737","Capg","gCap39|mbh1","capping protein (actin filament), gelsolin-like","protein-coding"]
["MACS_peak_7600","chr1",135943598,135944232,"+",162.06,"NA","Intergenic","Intergenic",-24708,"NM_019645",18772,"Mm.4494","NM_019645","ENSMUSG00000026413","Pkp1","-","plakophilin 1","protein-coding"]
["MACS_peak_125701","chr4",41093332,41093706,"+",161.5,"NA","3' UTR (NM_016689, exon 6 of 6)","3' UTR (NM_016689, exon 6 of 6)",4664,"NM_016689",11828,"Mm.34043","NM_016689","ENSMUSG00000028435","Aqp3","AQP-2","aquaporin 3","protein-coding"]
["MACS_peak_131661","chr4",125116120,125116614,"+",161.36,"NA","Intergenic","Intergenic",11514,"NM_153159",230738,"Mm.402","NM_153159","ENSMUSG00000042677","Zc3h12a","BC036563|MCPIP|Mcpip1","zinc finger CCCH type containing 12A","protein-coding"]
["MACS_peak_80528","chr17",27154079,27154694,"+",160.72,"NA","intron (NM_173027, intron 2 of 5)","intron (NM_173027, intron 2 of 5)",13378,"NM_173027",271424,"Mm.209679","NM_173027","ENSMUSG00000024210","Ip6k3","D830007E07Rik|Ihpk3","inositol hexaphosphate kinase 3","protein-coding"]
["MACS_peak_41639","chr12",69422890,69423465,"+",160.64,"NA","Intergenic","Intergenic",51027,"NM_007481",11845,"Mm.27308","NM_007481","ENSMUSG00000044147","Arf6","AI788669|AW496366","ADP-ribosylation factor 6","protein-coding"]
["MACS_peak_36982","chr11",117206043,117207063,"+",160.51,"NA","intron (NM_001113486, intron 1 of 11)","intron (NM_001113486, intron 1 of 11)",6892,"NM_001113486",53860,"Mm.38450","NM_017380","ENSMUSG00000059248","2009-09-01","MSF1|Msf|PNUTL4|Sint1","septin 9","protein-coding"]
["MACS_peak_7717","chr1",136230149,136230632,"+",160.11,"NA","intron (NM_028872, intron 1 of 9)","intron (NM_028872, intron 1 of 9)",3890,"NM_028872",67313,"Mm.36763","NM_028872","ENSMUSG00000041605","5730559C18Rik","1700034M08Rik|4933426C09Rik|AI586180|D1Mgi54","RIKEN cDNA 5730559C18 gene","protein-coding"]
["MACS_peak_85784","chr17",56550992,56551461,"+",159.56,"NA","TTS (NR_130128)","TTS (NR_130128)",3161,"NR_130128",100504425,"Mm.384143","NR_130128",null,"Gm20219","Tincr","predicted gene, 20219","ncRNA"]
["MACS_peak_29793","chr11",84882412,84882811,"+",159.33,"NA","5' UTR (NM_025414, exon 2 of 25)","5' UTR (NM_025414, exon 2 of 25)",-2326,"NM_001077636",70325,"Mm.390414","NM_027388","ENSMUSG00000045140","Pigw","2610044A17Rik|Gwt1","phosphatidylinositol glycan anchor biosynthesis, class W","protein-coding"]
["MACS_peak_138770","chr4",148797319,148797897,"+",159.21,"NA","Intergenic","Intergenic",-6784,"NM_001159344",69743,"Mm.233879","NM_027195","ENSMUSG00000028977","Casz1","2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e","castor zinc finger 1","protein-coding"]
["MACS_peak_188833","chr8",84980082,84980557,"+",159.11,"NA","Intergenic","CpG",-1571,"NM_008416",16477,"Mm.1167","NM_008416","ENSMUSG00000052837","Junb","-","jun B proto-oncogene","protein-coding"]
["MACS_peak_166633","chr6",125256675,125257213,"+",158.93,"NA","Intergenic","Intergenic",-8581,"NR_015527",73870,"Mm.440681","NR_015527","ENSMUSG00000108129","4930417O13Rik","-","RIKEN cDNA 4930417O13 gene","ncRNA"]
["MACS_peak_85941","chr17",56819706,56820196,"+",158.93,"NA","intron (NM_027787, intron 1 of 17)","intron (NM_027787, intron 1 of 17)",11057,"NM_009056",19725,"Mm.102","NM_009056","ENSMUSG00000024206","Rfx2","5430432H19Rik","regulatory factor X, 2 (influences HLA class II expression)","protein-coding"]
["MACS_peak_67123","chr15",83157057,83157543,"+",158.88,"NA","intron (NM_029787, intron 8 of 8)","intron (NM_029787, intron 8 of 8)",7655,"NR_004432",104307,"Mm.471434","NR_004432","ENSMUSG00000065176","Rnu12","-","RNA U12, small nuclear","snRNA"]
["MACS_peak_119300","chr3",52045989,52046516,"+",158.38,"NA","intron (NM_001004176, intron 1 of 4)","intron (NM_001004176, intron 1 of 4)",58754,"NM_001004176",433586,"Mm.234972","NM_001004176","ENSMUSG00000061143","Maml3","AV234550|BC049812|Mam-2|mKIAA1816","mastermind like 3 (Drosophila)","protein-coding"]
["MACS_peak_86114","chr17",57275021,57275477,"+",158.1,"NA","Intergenic","CpG",-3851,"NM_001163816",22324,"Mm.248172","NM_011691",null,"Vav1","Vav|vav-T","vav 1 oncogene","protein-coding"]
["MACS_peak_94731","chr19",5809812,5810262,"+",157.6,"NA","Intergenic","Intergenic",-7366,"NR_002847",72289,"Mm.298256","NR_002847","ENSMUSG00000092341","Malat1","2210401K01Rik|9430072K23Rik|AI647968|Neat2","metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)","ncRNA"]
["MACS_peak_123088","chr3",108772137,108772580,"+",157.39,"NA","intron (NM_177859, intron 7 of 11)","intron (NM_177859, intron 7 of 11)",32700,"NM_177859",329738,"Mm.72322","NM_177859","ENSMUSG00000049565","Aknad1","4921525H12Rik","AKNA domain containing 1","protein-coding"]
["MACS_peak_135677","chr4",137283091,137283611,"+",157.37,"NA","intron (NM_009523, intron 1 of 4)","intron (NM_009523, intron 1 of 4)",5716,"NM_009523",22417,"Mm.20355","NM_009523","ENSMUSG00000036856","Wnt4","Wnt-4","wingless-type MMTV integration site family, member 4","protein-coding"]
["MACS_peak_16913","chr10",80344797,80345196,"+",157.08,"NA","intron (NR_104339, intron 5 of 11)","intron (NR_104339, intron 5 of 11)",3452,"NM_001285435",66548,"Mm.71891","NM_025629","ENSMUSG00000043822","Adamtsl5","2010109H09Rik|Thsd6","ADAMTS-like 5","protein-coding"]
["MACS_peak_83546","chr17",35697441,35698003,"+",157.01,"NA","intron (NM_007584, intron 1 of 17)","intron (NM_007584, intron 1 of 17)",2868,"NM_001198833",12305,"Mm.5021","NM_007584","ENSMUSG00000003534","Ddr1","6030432F18|AI323681|CD167a|Cak|Nep|PTK3A","discoidin domain receptor family, member 1","protein-coding"]
["MACS_peak_10118","chr1",182088982,182089527,"+",156.97,"NA","Intergenic","Intergenic",-35483,"NM_012058",27058,"Mm.273196","NM_012058","ENSMUSG00000026511","Srp9","9kDa","signal recognition particle 9","protein-coding"]
["MACS_peak_167898","chr6",145340605,145341097,"+",156.28,"NA","Intergenic","CpG",-46774,"NR_003625",381827,"Mm.179075","NM_001001987",null,"1700073E17Rik","-","ribosomal protein L7 pseudogene","pseudo"]
["MACS_peak_7558","chr1",135820758,135821159,"+",156.23,"NA","intron (NM_133664, intron 1 of 9)","intron (NM_133664, intron 1 of 9)",2360,"NM_133664",16763,"Mm.36726","NM_133664","ENSMUSG00000041782","Lad1","-","ladinin","protein-coding"]
["MACS_peak_71189","chr15",101966257,101966674,"+",156.22,"NA","Intergenic","Intergenic",-12178,"NM_212487",332131,"Mm.325105","NM_212487","ENSMUSG00000050463","Krt78","2310030B04Rik|Kb40","keratin 78","protein-coding"]
["MACS_peak_31717","chr11",97434754,97435380,"+",155.8,"NA","Intergenic","Intergenic",-15093,"NM_021493",58996,"Mm.394118","NM_021493","ENSMUSG00000049807","Arhgap23","A330041B18Rik","Rho GTPase activating protein 23","protein-coding"]
["MACS_peak_138785","chr4",148823158,148823608,"+",155.52,"NA","intron (NM_001159344, intron 1 of 20)","intron (NM_001159344, intron 1 of 20)",18991,"NM_027195",69743,"Mm.233879","NM_027195","ENSMUSG00000028977","Casz1","2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e","castor zinc finger 1","protein-coding"]
["MACS_peak_103454","chr2",30554032,30554447,"+",155.43,"NA","Intergenic","Intergenic",-40805,"NM_030137",78617,"Mm.40413","NM_030137","ENSMUSG00000047363","Cstad","9530039B02Rik","CSA-conditional, T cell activation-dependent protein","protein-coding"]
["MACS_peak_120594","chr3",87910592,87910966,"+",155.28,"NA","intron (NM_008231, intron 1 of 5)","intron (NM_008231, intron 1 of 5)",4458,"NM_008231",15191,"Mm.292208","NM_008231","ENSMUSG00000004897","Hdgf","AI118077|D3Ertd299e","hepatoma-derived growth factor","protein-coding"]
["MACS_peak_80434","chr17",27039986,27040592,"+",155.03,"NA","Intergenic","Intergenic",11030,"NM_027544",70772,"Mm.440437","NM_027544","ENSMUSG00000048731","Ggnbp1","0610031G08Rik|mdf","gametogenetin binding protein 1","protein-coding"]
["MACS_peak_108539","chr2",103661784,103662399,"+",154.47,"NA","intron (NM_178890, intron 1 of 16)","intron (NM_178890, intron 1 of 16)",95781,"NM_178890",99382,"Mm.35850","NM_178890","ENSMUSG00000032724","Abtb2","AW539457|BPOZ-2","ankyrin repeat and BTB (POZ) domain containing 2","protein-coding"]
["MACS_peak_49238","chr13",38312069,38312598,"+",154.32,"NA","Intergenic","Intergenic",-33383,"NM_007556",12161,"Mm.385759","NM_007556","ENSMUSG00000039004","Bmp6","D13Wsu115e|Vgr1","bone morphogenetic protein 6","protein-coding"]
["MACS_peak_46960","chr12",111704391,111705037,"+",154.29,"NA","Intergenic","Intergenic",8542,"NM_027404",70369,"Mm.44239","NM_027404","ENSMUSG00000049792","Bag5","1600025G07Rik|4930405J06Rik","BCL2-associated athanogene 5","protein-coding"]
["MACS_peak_127392","chr4",57153394,57154004,"+",153.64,"NA","Intergenic","Intergenic",-10543,"NM_019427",54357,"Mm.28217","NM_019427","ENSMUSG00000028434","Epb41l4b","6430543G08Rik|AA589614|AU021054|BB007528|D4Ertd346e|Ehm2|Epb4.1l4b|Lulu2","erythrocyte membrane protein band 4.1 like 4b","protein-coding"]
["MACS_peak_78893","chr17",21532259,21532716,"+",153.51,"NA","intron (NR_131123, intron 2 of 2)","CpG",-3052,"NM_144515",22710,"Mm.296100","NM_144515",null,"Zfp52","KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29","zinc finger protein 52","protein-coding"]
["MACS_peak_99825","chr19",56990304,56990769,"+",153.45,"NA","intron (NM_146102, intron 1 of 20)","intron (NM_146102, intron 1 of 20)",18039,"NM_146102",226250,"Mm.226284","NM_146102","ENSMUSG00000025083","Afap1l2","AU041783|C86904|mKIAA1914","actin filament associated protein 1-like 2","protein-coding"]
["MACS_peak_82242","chr17",31066945,31067436,"+",153,"NA","intron (NM_009593, intron 2 of 14)","intron (NM_009593, intron 2 of 14)",9496,"NM_009593",11307,"Mm.15691","NM_009593",null,"Abcg1","AW413978|Abc8|White","ATP-binding cassette, sub-family G (WHITE), member 1","protein-coding"]
["MACS_peak_56479","chr14",31662178,31662699,"+",152.78,"NA","intron (NM_025295, intron 2 of 3)","intron (NM_025295, intron 2 of 3)",21381,"NM_025295",26363,"Mm.282679","NM_025295","ENSMUSG00000021900","Btd","-","biotinidase","protein-coding"]
["MACS_peak_99877","chr19",57238263,57238798,"+",152.22,"NA","Intergenic","Intergenic",-22498,"NM_178688",226251,"Mm.217161","NM_178688","ENSMUSG00000025085","Ablim1","2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059","actin-binding LIM protein 1","protein-coding"]
["MACS_peak_51686","chr13",56433371,56433859,"+",152.09,"NA","Intergenic","Intergenic",-4740,"NM_177809",328258,"Mm.482177","NM_177809",null,"Slc25a48","AU042651|E230025K15","solute carrier family 25, member 48","protein-coding"]
["MACS_peak_173856","chr7",49400976,49401433,"+",151.94,"NA","intron (NM_001111016, intron 5 of 38)","intron (NM_001111016, intron 5 of 38)",155015,"NM_175272",78286,"Mm.333881","NM_175272","ENSMUSG00000052512","Nav2","5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015","neuron navigator 2","protein-coding"]
["MACS_peak_94988","chr19",6297387,6297890,"+",151.9,"NA","exon (NM_010119, exon 4 of 5)","exon (NM_010119, exon 4 of 5)",-8819,"NM_001033342",240505,"Mm.329622","NM_001033342","ENSMUSG00000024769","Cdc42bpg","BC046418|MRCKgamma","CDC42 binding protein kinase gamma (DMPK-like)","protein-coding"]
["MACS_peak_139530","chr4",150707375,150707750,"+",151.81,"NA","Intergenic","Intergenic",-55388,"NM_173774",242773,"Mm.29280","NM_173774",null,"Slc45a1","C230078B22|Dnb5","solute carrier family 45, member 1","protein-coding"]
["MACS_peak_50157","chr13",48878431,48878889,"+",151.68,"NA","TTS (NM_001033268)","TTS (NM_001033268)",-7775,"NM_011078",18676,"Mm.486213","NM_011078","ENSMUSG00000038025","Phf2","GRC5","PHD finger protein 2","protein-coding"]
["MACS_peak_196083","chr8",126667056,126667415,"+",151.61,"NA","Intergenic","Intergenic",-73799,"NM_001164598",270110,"Mm.334918","NM_001164598","ENSMUSG00000051495","Irf2bp2","E130305N23Rik|IRF-2BP2","interferon regulatory factor 2 binding protein 2","protein-coding"]
["MACS_peak_17521","chr10",81146418,81146877,"+",151.19,"NA","intron (NM_010731, intron 2 of 2)","intron (NM_010731, intron 2 of 2)",10376,"NM_010731",16969,"Mm.20920","NM_010731","ENSMUSG00000035011","Zbtb7a","9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7","zinc finger and BTB domain containing 7a","protein-coding"]
["MACS_peak_20077","chr10",126928365,126928952,"+",151.17,"NA","Intergenic","Intergenic",-27287,"NM_001159559",68876,"Mm.276769","NM_026858","ENSMUSG00000025436","Xrcc6bp1","1110068E08Rik|2410012H02Rik","XRCC6 binding protein 1","protein-coding"]
["MACS_peak_11163","chr1",191989939,191990414,"+",150.99,"NA","Intergenic","Intergenic",8458,"NR_039566",100628582,null,"NR_039566","ENSMUSG00000093003","Mir3473c","mmu-mir-3473c","microRNA 3473c","ncRNA"]
["MACS_peak_131667","chr4",125123065,125123444,"+",150.93,"NA","intron (NM_153159, intron 2 of 5)","intron (NM_153159, intron 2 of 5)",4627,"NM_153159",230738,"Mm.402","NM_153159","ENSMUSG00000042677","Zc3h12a","BC036563|MCPIP|Mcpip1","zinc finger CCCH type containing 12A","protein-coding"]
["MACS_peak_5198","chr1",93704409,93704916,"+",150.83,"NA","TTS (NM_025920)","TTS (NM_025920)",19087,"NM_016778",51800,"Mm.3295","NM_016778","ENSMUSG00000026278","Bok","matador|mtd","BCL2-related ovarian killer","protein-coding"]