Table 5. List of identified weak SRC-3 binding sites

Binding

site ID

Nearest gene, mRNA, EST, or genomic location

GenBank accession no.

Distance

to

gene

start

Cluster Information

ERE

No. of Tags

No. of

Distinct

Tags

Length, nt

Class*

Weak binding sites

             

RGS8

regulator of G-protein signaling 8

NM033345

-13845

2

2

218

A

ERE

C20orf4

chromosome 20 open reading frame 4

NM015511

765, 912

2

2

190

A

(ERE)

AI434476

IMAGE:2132662

(± )1842

7

1

45

B

AL709692

clone DKFZp686D0463

-1154

4

1

47

B

GALNT11, BC059377

N-acetylgalactosaminyltransferase 11

NM022087

50730, 1523

4

1

44

B

BC038557

IMAGE:3451831

425

3

1

44

B

(ERE)

AL833283 (DNMBP)

DKFZp451J178 (colinear with dynamin binding prot.)

1096

3

1

44

B

DKFZ-p434L142

hypothetical protein DKFZp434L142

NM016613

-1150

2

1

46

B

2 ERE

NRAS

neuroblastoma RAS viral (v-ras) oncogene homolog

NM002524

-978

2

1

47

B

2 (ERE)

BANP

BTG3 associated nuclear protein

NM017869

-6399

1

1

48

NA

4 ERE

IGFBP2

insulin-like growth factor binding protein 2

NM000597

-6676

1

1

54

NA

2 ERE

*Class A clusters consist of two or more distinct tags with different or only partially overlapping sequences; Class B clusters consist of two or more identical or almost identical tags. Class B cluster could arise during amplification steps in the cloning protocol and may represent single alignments.

†ERE, estrogen-response element within 500 bp of the nearest tag; (ERE), ERE within 500-1,000 bp of the nearest tag.