CDS Length MolWt SeqCvg SeqCnt norm_SeqCnt SpecCnt norm_spec_cnt NSAF_total per_phg_NSAF sqrt_NSAF1000 MolWt_10-3 gel_band_x1 gel_band_x2 phage_label R code for model SDS-PAGE band PSAHS1_00030 321 33929 0.707 28 0.087227414 2477 7.716510903 0.20927 0.784788099 14.46616743 33.929 81 90 "HS1" lines(c(81,90),c(33.929,33.929), lwd=78.4788099338169) PSAHS1_00024 160 17542 0.612 10 0.0625 121 0.75625 0.02051 0.076912481 4.52879675 17.542 81 90 "HS1" lines(c(81,90),c(17.542,17.542), lwd=7.6912481243424) PSAHS1_00032 502 56665 0.416 20 0.039840637 114 0.227091633 0.00616 0.023095777 2.481934729 56.665 81 90 "HS1" lines(c(81,90),c(56.665,56.665), lwd=2.3095776528268) PSAHS1_00016 779 82813 0.362 21 0.026957638 108 0.138639281 0.00376 0.014099955 1.939071943 82.813 81 90 "HS1" lines(c(81,90),c(82.813,82.813), lwd=1.40999551860975) PSAHS1_00013 770 81266 0.299 19 0.024675325 292 0.379220779 0.01028 0.038567684 3.206243908 81.266 81 90 "HS1" lines(c(81,90),c(81.266,81.266), lwd=3.85676840580957) PSAHS1_00028 413 44188 0.264 11 0.026634383 42 0.101694915 0.00276 0.010342622 1.661324773 44.188 81 90 "HS1" lines(c(81,90),c(44.188,44.188), lwd=1.03426224952636) PSAHS1_00015 303 33626 0.254 6 0.01980198 58 0.191419142 0.00519 0.019467797 2.27815715 33.626 81 90 "HS1" lines(c(81,90),c(33.626,33.626), lwd=1.94677965779935) PSAHS1_00021 140 15866 0.243 2 0.014285714 12 0.085714286 0.00232 0.008717353 1.523154621 15.866 81 90 "HS1" lines(c(81,90),c(15.866,15.866), lwd=0.871735324600792) PSAHS1_00020 372 39723 0.239 6 0.016129032 28 0.075268817 0.00204 0.007655023 1.428285686 39.723 81 90 "HS1" lines(c(81,90),c(39.723,39.723), lwd=0.765502345975606) PSAHS1_00023 139 15704 0.187 2 0.014388489 2 0.014388489 0.00039 0.001463345 0.6244998 15.704 81 90 "HS1" lines(c(81,90),c(15.704,15.704), lwd=0.146334466959366) PSAHS1_00035 398 44721 0.171 6 0.015075377 20 0.050251256 0.00136 0.005110676 1.166190379 44.721 81 90 "HS1" lines(c(81,90),c(44.721,44.721), lwd=0.511067610737483) PSAHS1_00020 172 17916 0.151 2 0.011627907 9 0.052325581 0.00142 0.00532164 1.191637529 17.916 81 90 "HS1" lines(c(81,90),c(17.916,17.916), lwd=0.532164006296995) PSAHS1_00014 867 92076 0.145 11 0.012687428 38 0.043829296 0.00119 0.004457547 1.090871211 92.076 81 90 "HS1" lines(c(81,90),c(92.076,92.076), lwd=0.445754702698598) PSAHP1_00022 319 35302 0.69 29 0.090909091 864 2.70846395 0.06531 0.711526008 8.081460264 35.302 11 20 "HP1" lines(c(11,20),c(35.302,35.302), lwd=71.1526007967817) PSAHP1_00013 1611 175561 0.391 55 0.034140286 161 0.099937927 0.00241 0.026254156 1.55241747 175.561 11 20 "HP1" lines(c(11,20),c(175.561,175.561), lwd=2.62541556337356) PSAHP1_00030 651 70408 0.364 25 0.038402458 103 0.158218126 0.00382 0.041564634 1.954482029 70.408 11 20 "HP1" lines(c(11,20),c(70.408,70.408), lwd=4.15646335477445) PSAHP1_00029 751 80579 0.354 27 0.035952064 180 0.239680426 0.00578 0.062965157 2.404163056 80.579 11 20 "HP1" lines(c(11,20),c(80.579,80.579), lwd=6.29651566083371) PSAHP1_00012 600 64670 0.337 14 0.023333333 83 0.138333333 0.00334 0.036340807 1.827566688 64.67 11 20 "HP1" lines(c(11,20),c(64.67,64.67), lwd=3.63408065450692) PSAHP1_00025 567 64046 0.31 13 0.02292769 69 0.121693122 0.00293 0.031969346 1.711724277 64.046 11 20 "HP1" lines(c(11,20),c(64.046,64.046), lwd=3.19693459757733) PSAHP1_00018 321 35112 0.24 4 0.012461059 11 0.034267913 0.00083 0.009002339 0.911043358 35.112 11 20 "HP1" lines(c(11,20),c(35.112,35.112), lwd=0.900233919594103) PSAHP1_00020 265 30280 0.204 3 0.011320755 7 0.026415094 0.00064 0.006939367 0.8 30.28 11 20 "HP1" lines(c(11,20),c(30.28,30.28), lwd=0.693936746939262) PSAHP1_00017 197 21301 0.173 2 0.010152284 3 0.015228426 0.00037 0.004000578 0.608276253 21.301 11 20 "HP1" lines(c(11,20),c(21.301,21.301), lwd=0.40005780552336) PSAHP1_00021 176 18107 0.165 8 0.045454545 43 0.244318182 0.00589 0.064183516 2.42693222 18.107 11 20 "HP1" lines(c(11,20),c(18.107,18.107), lwd=6.41835164884163) PSAHP1_00016 400 45242 0.078 2 0.005 8 0.02 0.00048 0.005254093 0.692820323 45.242 11 20 "HP1" lines(c(11,20),c(45.242,45.242), lwd=0.525409251254013) PSAHS6_00041 142 15573 0.613 6 0.042253521 49 0.345070423 0.01232 0.083031778 3.509985755 15.573 191 200 "HS6" lines(c(191,200),c(15.573,15.573), lwd=8.30317776204151) PSAHS6_00039 307 33983 0.57 35 0.114006515 564 1.83713355 0.0656 0.44205604 8.099382693 33.983 191 200 "HS6" lines(c(191,200),c(33.983,33.983), lwd=44.205603975695) PSAHS6_00044 1196 128772 0.501 59 0.049331104 213 0.178093645 0.00636 0.042853374 2.521904043 128.772 191 200 "HS6" lines(c(191,200),c(128.772,128.772), lwd=4.28533742732079) PSAHS6_00043 256 27254 0.492 15 0.05859375 125 0.48828125 0.01743 0.117491554 4.174925149 27.254 191 200 "HS6" lines(c(191,200),c(27.254,27.254), lwd=11.7491553951082) PSAHS6_00048 120 13288 0.417 4 0.033333333 7 0.058333333 0.00208 0.014036324 1.44222051 13.288 191 200 "HS6" lines(c(191,200),c(13.288,13.288), lwd=1.40363243120226) PSAHS6_00035 61 6790 0.41 3 0.049180328 10 0.163934426 0.00585 0.039446345 2.418677324 6.79 191 200 "HS6" lines(c(191,200),c(6.79,6.79), lwd=3.94463446707894) PSAHS6_00030 528 58251 0.383 18 0.034090909 107 0.202651515 0.00724 0.048762555 2.690724809 58.251 191 200 "HS6" lines(c(191,200),c(58.251,58.251), lwd=4.87625552398186) PSAHS6_00036 381 41431 0.365 17 0.044619423 255 0.669291339 0.0239 0.161046691 4.888762625 41.431 191 200 "HS6" lines(c(191,200),c(41.431,41.431), lwd=16.1046690644128) PSAHS6_00047 234 26167 0.274 4 0.017094017 9 0.038461538 0.00137 0.009254719 1.170469991 26.167 191 200 "HS6" lines(c(191,200),c(26.167,26.167), lwd=0.925471932660828) PSAHS6_00031 493 55380 0.262 12 0.024340771 29 0.058823529 0.0021 0.014154277 1.449137675 55.38 191 200 "HS6" lines(c(191,200),c(55.38,55.38), lwd=1.41542766171656) PSAHS6_00046 710 76703 0.206 11 0.015492958 32 0.045070423 0.00161 0.010844967 1.268857754 76.703 191 200 "HS6" lines(c(191,200),c(76.703,76.703), lwd=1.08449668728705) PSAHS6_00037 128 14011 0.125 2 0.015625 7 0.0546875 0.00195 0.013159054 1.396424004 14.011 191 200 "HS6" lines(c(191,200),c(14.011,14.011), lwd=1.31590540425211) PSAHS6_00050 623 69217 0.106 5 0.008025682 10 0.016051364 0.00057 0.003862323 0.754983444 69.217 191 200 "HS6" lines(c(191,200),c(69.217,69.217), lwd=0.386232267242079) PSAHS2_00055 750 78370 0.635 43 0.057333333 451 0.601333333 0.02147 0.050267551 4.633573135 78.37 151 160 "HS2" lines(c(151,160),c(78.37,78.37), lwd=5.0267551361308) PSAHS2_00012 498 55644 0.608 36 0.072289157 380 0.763052209 0.02725 0.063786196 5.220153254 55.644 151 160 "HS2" lines(c(151,160),c(55.644,55.644), lwd=6.37861963952163) PSAHS2_00003 321 34303 0.555 35 0.109034268 1671 5.205607477 0.18587 0.435154891 13.63341483 34.303 151 160 "HS2" lines(c(151,160),c(34.303,34.303), lwd=43.5154891128467) PSAHS2_00058 155 17835 0.542 8 0.051612903 52 0.335483871 0.01198 0.028044267 3.46121366 17.835 151 160 "HS2" lines(c(151,160),c(17.835,17.835), lwd=2.80442672640156) PSAHS2_00052 649 69402 0.487 34 0.05238829 472 0.727272727 0.02597 0.060795265 5.096076922 69.402 151 160 "HS2" lines(c(151,160),c(69.402,69.402), lwd=6.07952646982157) PSAHS2_00057 393 41883 0.483 29 0.073791349 898 2.284987277 0.08159 0.191010059 9.032718306 41.883 151 160 "HS2" lines(c(151,160),c(41.883,41.883), lwd=19.1010058743312) PSAHS2_00007 381 42758 0.444 14 0.036745407 47 0.12335958 0.0044 0.010312058 2.097617696 42.758 151 160 "HS2" lines(c(151,160),c(42.758,42.758), lwd=1.03120576932341) PSAHS2_00060 142 15524 0.437 7 0.049295775 37 0.26056338 0.0093 0.021781402 3.049590136 15.524 151 160 "HS2" lines(c(151,160),c(15.524,15.524), lwd=2.17814020529699) PSAHS2_00054 289 31672 0.408 10 0.034602076 126 0.435986159 0.01557 0.036445604 3.945883931 31.672 151 160 "HS2" lines(c(151,160),c(31.672,31.672), lwd=3.64456041832729) PSAHS2_00053 873 93126 0.383 26 0.02978236 262 0.300114548 0.01072 0.025087622 3.274141109 93.126 151 160 "HS2" lines(c(151,160),c(93.126,93.126), lwd=2.50876221163026) PSAHS2_00001 188 20189 0.277 5 0.026595745 78 0.414893617 0.01481 0.034682405 3.848376281 20.189 151 160 "HS2" lines(c(151,160),c(20.189,20.189), lwd=3.46824049940619) PSAHS2_00059 140 15617 0.207 2 0.014285714 7 0.05 0.00179 0.004179674 1.337908816 15.617 151 160 "HS2" lines(c(151,160),c(15.617,15.617), lwd=0.417967444800233) PSAHS2_00061 185 19532 0.2 5 0.027027027 74 0.4 0.01428 0.033437396 3.778888726 19.532 151 160 "HS2" lines(c(151,160),c(19.532,19.532), lwd=3.34373955840186) PSAH105_1_CDS_28 321 33929 0.729 37 0.115264798 2895 9.018691589 0.21746 14.74652501 33.929 NA NA NA NA PSAH105_1_CDS_43 779 82813 0.646 43 0.055198973 233 0.299101412 0.00721 2.685144316 82.813 NA NA NA NA PSAH105_1_CDS_35 160 17542 0.569 9 0.05625 126 0.7875 0.01899 4.357751714 17.542 NA NA NA NA PSAH105_1_CDS_30 413 44188 0.55 20 0.04842615 114 0.276029056 0.00666 2.58069758 44.188 NA NA NA NA PSAH105_1_CDS_26 502 56665 0.452 29 0.057768924 184 0.366533865 0.00884 2.973213749 56.665 NA NA NA NA PSAH105_1_CDS_38 140 15866 0.407 5 0.035714286 57 0.407142857 0.00982 3.133687923 15.866 NA NA NA NA PSAH105_1_CDS_44 303 33626 0.36 8 0.02640264 133 0.438943894 0.01058 3.252691193 33.626 NA NA NA NA PSAH105_1_CDS_39 397 42551 0.327 14 0.035264484 38 0.095717884 0.00231 1.519868415 42.551 NA NA NA NA PSAH105_1_CDS_20 398 44721 0.334 14 0.035175879 36 0.090452261 0.00218 1.476482306 44.721 NA NA NA NA PSAH105_1_CDS_37 130 14197 0.292 2 0.015384615 2 0.015384615 0.00037 0.608276253 14.197 NA NA NA NA PSAH105_1_CDS_46 739 77805 0.291 28 0.037889039 305 0.412719892 0.00995 3.154362059 77.805 NA NA NA NA PSAH105_1_CDS_46 197 21903 0.259 7 0.035532995 61 0.30964467 0.00747 2.733130074 21.903 NA NA NA NA PSAH105_1_CDS_45 867 92076 0.198 13 0.014994233 50 0.057670127 0.00139 1.178982612 92.076 NA NA NA NA PSAH105_1_CDS_36 139 15704 0.187 2 0.014388489 4 0.028776978 0.00069 0.830662386 15.704 NA NA NA NA PSAHM1_00107 357 39922 0.616 25 0.070028011 905 2.535014006 0.06875 0.351777398 8.291561976 39.922 51 60 "HM1" lines(c(51,60),c(39.922,39.922), lwd=35.1777398280165) PSAHM1_00108 125 13298 0.592 9 0.072 296 2.368 0.06422 0.328601293 8.013738204 13.298 51 60 "HM1" lines(c(51,60),c(13.298,13.298), lwd=32.8601292650269) PSAHM1_00001 182 20509 0.467 6 0.032967033 55 0.302197802 0.0082 0.041935215 2.863564213 20.509 51 60 "HM1" lines(c(51,60),c(20.509,20.509), lwd=4.19352147121064) PSAHM1_00112 359 39675 0.357 9 0.025069638 87 0.242339833 0.00657 0.033628878 2.563201124 39.675 51 60 "HM1" lines(c(51,60),c(39.675,39.675), lwd=3.36288776779688) PSAHM1_00141 886 96573 0.319 23 0.025959368 143 0.161399549 0.00438 0.022397002 2.092844954 96.573 51 60 "HM1" lines(c(51,60),c(96.573,96.573), lwd=2.23970018078654) PSAHM1_00103 295 31804 0.302 7 0.023728814 60 0.203389831 0.00552 0.028223886 2.349468025 31.804 51 60 "HM1" lines(c(51,60),c(31.804,31.804), lwd=2.82238856490725) PSAHM1_00084 119 13240 0.294 2 0.016806723 2 0.016806723 0.00046 0.002332226 0.678232998 13.24 51 60 "HM1" lines(c(51,60),c(13.24,13.24), lwd=0.233222584495137) PSAHM1_00110 178 19939 0.258 5 0.028089888 70 0.393258427 0.01066 0.054571464 3.264965543 19.939 51 60 "HM1" lines(c(51,60),c(19.939,19.939), lwd=5.45714642933847) PSAHM1_00096 459 49333 0.246 10 0.021786492 93 0.202614379 0.00549 0.028116278 2.343074903 49.333 51 60 "HM1" lines(c(51,60),c(49.333,49.333), lwd=2.81162782419138) PSAHM1_00140 259 29016 0.228 4 0.015444015 25 0.096525097 0.00262 0.01339454 1.618641406 29.016 51 60 "HM1" lines(c(51,60),c(29.016,29.016), lwd=1.33945403257342) PSAHM1_00089 205 22149 0.224 3 0.014634146 5 0.024390244 0.00066 0.003384572 0.81240384 22.149 51 60 "HM1" lines(c(51,60),c(22.149,22.149), lwd=0.338457165303919) PSAHM1_00083 491 53094 0.145 4 0.00814664 18 0.036659878 0.00099 0.005087197 0.994987437 53.094 51 60 "HM1" lines(c(51,60),c(53.094,53.094), lwd=0.508719731149271) PSAHM1_00092 372 42260 0.14 4 0.010752688 9 0.024193548 0.00066 0.003357277 0.81240384 42.26 51 60 "HM1" lines(c(51,60),c(42.26,42.26), lwd=0.335727672035339) PSAHM1_00101 185 19438 0.135 2 0.010810811 3 0.016216216 0.00044 0.002250283 0.663324958 19.438 51 60 "HM1" lines(c(51,60),c(19.438,19.438), lwd=0.225028277472335) PSAHM1_00095 175 19134 0.126 2 0.011428571 62 0.354285714 0.00961 0.049163321 3.1 19.134 51 60 "HM1" lines(c(51,60),c(19.134,19.134), lwd=4.91633208115749) PSAHM1_00090 330 35761 0.124 3 0.009090909 10 0.03030303 0.00082 0.004205074 0.905538514 35.761 51 60 "HM1" lines(c(51,60),c(35.761,35.761), lwd=0.420507387195778) PSAHM1_00086 240 26323 0.121 2 0.008333333 2 0.008333333 0.00023 0.001156395 0.479583152 26.323 51 60 "HM1" lines(c(51,60),c(26.323,26.323), lwd=0.115639531478839) PSAHM1_00115 468 48090 0.118 4 0.008547009 76 0.162393162 0.0044 0.022534883 2.097617696 48.09 51 60 "HM1" lines(c(51,60),c(48.09,48.09), lwd=2.25348830574148) PSAHM1_00082 293 32556 0.102 2 0.006825939 7 0.023890785 0.00065 0.003315263 0.806225775 32.556 51 60 "HM1" lines(c(51,60),c(32.556,32.556), lwd=0.331526301850596) PSAHM1_00109 489 53586 0.039 2 0.00408998 2 0.00408998 0.00011 0.000567556 0.331662479 53.586 51 60 "HM1" lines(c(51,60),c(53.586,53.586), lwd=0.0567555982718228) PSAHS5_00057 321 33929 0.729 37 0.115264798 2895 9.018691589 0.21746 0.71552447 14.74652501 33.929 111 120 "HS5" lines(c(111,120),c(33.929,33.929), lwd=71.5524469993254) PSAHS5_00043 779 82813 0.646 43 0.055198973 233 0.299101412 0.00721 0.023730092 2.685144316 82.813 111 120 "HS5" lines(c(111,120),c(82.813,82.813), lwd=2.37300918028319) PSAHS5_00051 160 17542 0.569 9 0.05625 126 0.7875 0.01899 0.062478633 4.357751714 17.542 111 120 "HS5" lines(c(111,120),c(17.542,17.542), lwd=6.24786328008358) PSAHS5_00055 413 44188 0.55 20 0.04842615 114 0.276029056 0.00666 0.021899578 2.58069758 44.188 111 120 "HS5" lines(c(111,120),c(44.188,44.188), lwd=2.18995784289797) PSAHS5_00059 502 56665 0.452 29 0.057768924 184 0.366533865 0.00884 0.029080044 2.973213749 56.665 111 120 "HS5" lines(c(111,120),c(56.665,56.665), lwd=2.90800441038482) PSAHS5_00048 140 15866 0.407 5 0.035714286 57 0.407142857 0.00982 0.032301878 3.133687923 15.866 111 120 "HS5" lines(c(111,120),c(15.866,15.866), lwd=3.23018781827451) PSAHS5_00042 303 33626 0.36 8 0.02640264 133 0.438943894 0.01058 0.034824907 3.252691193 33.626 111 120 "HS5" lines(c(111,120),c(33.626,33.626), lwd=3.48249071717164) PSAHS5_00047 397 42551 0.327 14 0.035264484 38 0.095717884 0.00231 0.00759406 1.519868415 42.551 111 120 "HS5" lines(c(111,120),c(42.551,42.551), lwd=0.759406036202235) PSAHS5_00062 398 44721 0.334 14 0.035175879 36 0.090452261 0.00218 0.007176297 1.476482306 44.721 111 120 "HS5" lines(c(111,120),c(44.721,44.721), lwd=0.717629666054109) PSAHS5_00049 130 14197 0.292 2 0.015384615 2 0.015384615 0.00037 0.001220584 0.608276253 14.197 111 120 "HS5" lines(c(111,120),c(14.197,14.197), lwd=0.122058379098092) PSAHS5_00040 739 77805 0.291 28 0.037889039 305 0.412719892 0.00995 0.032744349 3.154362059 77.805 111 120 "HS5" lines(c(111,120),c(77.805,77.805), lwd=3.27443486552053) PSAHS5_00040 197 21903 0.259 7 0.035532995 61 0.30964467 0.00747 0.024566572 2.733130074 21.903 111 120 "HS5" lines(c(111,120),c(21.903,21.903), lwd=2.45665722397936) PSAHS5_00041 867 92076 0.198 13 0.014994233 50 0.057670127 0.00139 0.004575429 1.178982612 92.076 111 120 "HS5" lines(c(111,120),c(92.076,92.076), lwd=0.457542943562629) PSAHS5_00050 139 15704 0.187 2 0.014388489 4 0.028776978 0.00069 0.002283106 0.830662386 15.704 111 120 "HS5" lines(c(111,120),c(15.704,15.704), lwd=0.228310637161899)