AnimaliaDorylaimidaLongidoridaeGrozaMarianaLazarovaStelaLucaFrancesca DeFanelliElenaMilka ElshishkaRadoslavovGeorgiHristovPeterComanMihaelaPenevaVladaThe morphological and molecular identity of Longidorus piceicola Lišková, Robbins & Brown, 1997 from Romania (Nematoda, Dorylaimida)Zookeys1042017201766711910.3897/zookeys.667.12011 Longidorus piceicola Lišková, Robbins & Brown, 1997Material examined.

Eleven females and 21 juveniles, two females and one juvenile from Cernica forest, Ilfov County, Romania on slide numbers NE 35–37 stored at the reference collection of the National Phytosanitary Laboratory, Voluntari, Romania, 9 females and 20 juveniles - at the personal collection of the first author; nine females and 30 juveniles from Bran, Braşov County, Romania, stored in the nematode collection of IBER, Bulgaria, slide numbers N2-29/2/1-19.

Description.

Figures 17.

Measurements See Tables 13.

Females (Figs 1A, B14, G2–4, 5E, 6E, J, O, 7) based on the Larix population, Bran, Braşov County.

Longidorus piceicola Female and juveniles: A Neck region – female B1–B4, C Head end with amphidial fovea B1–B3 females, B4 juvenile 4th stage (B2 right and B3 left) C, D, E1, E2, F Anterior ends of first- to fourth-stage juveniles G–K Pharyngeal bulb of female (G) and first- to fourth-stage juveniles (H–K).

Habitus spiral shaped, more strongly coiled in posterior part of body. Cuticle 3–4 μm thick at guide ring region, ca 3 μm in mid-body, and 5–6 μm on tail posterior to anus. Lip region broadly rounded anteriorly, rounded laterally, almost continuous with rest of body. Amphideal fovea pocket-shaped, varying from not lobed to symmetrically bilobed at base (according to terminology proposed by Decraemer and Coomans 2007) extending to ca half the distance anterior end-guide ring. Left and right fovea of about equal size (12.7 (11–14) μm, n = 5), sensillar pouch (fusus) just posterior the guide ring, the distance from the fovea to fusus 24 (23–29 μm). Pharyngeal bulb occupying 25 (22–29) % of total pharynx length; dorsal nucleus located at 29.5 (27–32) % (n = 7) of bulb length; ventro-sublateral nuclei at 54 (48–57) % (n = 8) (left) and 54 (52–56.5) % (n = 8) (right); opening of the dorsal gland at 9 (7.5–11) % and opening of the ventro-sublateral glands at 84 (80.5–90.5) % of the distance from anterior end of pharyngeal bulb, respectively. In one female, a small vestigium (5 μm) observed in wall of slender pharynx. Two nerve rings observed, the first one at 207.2 ± 8.8 (193–218) μm from anterior end, surrounding about mid-odontophore; the second at 329 ± 11.6 (313–344) μm from anterior end, n = 6, (first at 235.7 ± 12.7 (215–255) and second at 329.3 ± 18.6 (290–343) μm from anterior end, n = 7, Cernica forest). Tail bluntly conical, dorsally convex, flat or shallowly concave ventrally. Two pairs of caudal pores. Reproductive system didelphic, two branches of about equal size. Vagina occupies ca 50 % of corresponding body width; pars distalis vaginae and pars proximalis vaginae 13–15 μm and 15–19 μm long, respectively. Uteri short, anterior uterus 96.3 ± 13.5 (80–120) μm long, posterior 91.0 ± 10.5 (76–107) μm. Uteri shorter in Cernica population – anterior uterus 80.9 ± 7.0 (70–90) μm long and posterior 78.3 ± 8.3 (70–95) μm long. Sphincter between uterus and pars dilatata oviductus well developed. Sperm observed in both uteri of one female.

Longidorus piceicola Female from Bran locality: A, B Variations in tail shape C Vagina.

In the population from Cernica forest two females with reserve odontostyles have been observed (Table 3).

Male. Not found.

Juveniles (Figs 1C–F, H–K; 6A–D, F–I, K–N, 7).

General morphology similar to adult females. Body habitus similar in all stages, open C- to J-shaped. Tail of all juvenile stages conical, but becoming more rounded and c’ decreasing in subsequent stages: tail of first stage juvenile elongate conoid with slightly digitate terminus, in the second stage – elongate conoid, in third – bluntly conoid, variable, with narrow to widely rounded terminus, in fourth – resembling that of female, bluntly conoid (Fig. 5). In several juveniles, the abnormalities in their development did not allow to assign them to a particular stage and the morphometrics are presented separately (Table 3). The lengths of functional and replacement odontostyles used to infer the developmental stages were in contradiction with other measurements such as L, a, b, c etc. which were in correspondence with a different stage, or the functional odontostyle was in the ranges of one stage while the replacement one was not in the ranges of the next stage; in one occasion the length of replacement odontostyle was less than that of the replacement one (Table 3).

Longidorus piceicola Female from Bran locality: A Neck region, black arrows indicate nerve rings B, C Head end (different magnifications) D, E Amphideal fovea (right and left) F Odontophore G Prerectum H Pharyngeal bulb I, J Variations in tail shape. Scale bars: A, G 80 μm; B, F, H, I, J 40 μm; C–E 20 μm.

Longidorus piceicola Female from Bran locality: A Anterior genital branch B Uterus part with sperm C Ovary D Nerve ring E Posterior genital branch F Lateral field and epidermal glans G–I Variations in vagina (different magnifications). Scale bars: A, E 80 μm; B–D, F–H 40 μm; I 20 μm.

Measurements of females and juveniles (J) of Longidorus piceicola from Bran, Braşov County, Romania (mean ± standard deviation, with range). All measurements in micrometers except for body length (mm).

CharacterFemalesJ1J2J3J4
n96483
L4.90±0.47 4.05–5.641.32±0.11 1.15–1.471.83±0.16 1.63–2.022.62±0.13 2.38–2.813.21, 3.91, 3.22
a84.6±8.0 71.1–97.355.4±4.6 47–60.859.3±5.5 53.5–65.967.6±3.6 62.3–71.973.6, 67.9, 75.5
b9.9 ± 0.6 9.7–11.14.3±0.2 4.1–4.55.2±0.3 4.8–5.56.4±0.5 5.8–7.36.7, 8.1, 7.1
c129.7±13.2 102.4–147.329.3±2.5 26.4–32.142.3±4.9 35–45.361.7±5.7 53.5–69.577.9, 108.4, 84.7
c’0.97±0.06 0.89–1.102.8±0.3 2.6–3.21.9±0.2 1.64–2.151.45±0.1 1.38–1.581.23, 0.90, 1.18
V (%)49.2±1.2 47.2–51.3
G1 (%)6.7±0.7 5.8–7.8
G2 (%)6.1±0.9 5.4–7.5
Developing gonad16.2±1.2 15–1728.3±7.2 20–3333.3±2.1 31.5–37–, 48, 45
d2.63±0.1 2.45–2.82.6±0.2 2.5–2.72.7±0.3 2.5–3.02.37±1.0 2.5–2.82.9, 2.8, 2.9
d’2.02±0.1 1.9–2.11.8±0.1 1.65–2.31.95±0.25 1.7–2.31.9±0.1 1.7–1.92.0, 2.1, 2.1
Odontostyle155.5±5.2 147–16395.8±1.2 82–90.3100.7±3.0 97.5–105118.4±3.7 115–125130, 143, 142
Replacement odontostyle103.7±3.5 99.5–110115.4±6.0 109–123137.8±2.7 134–143151, 153, 154
Odontophore77.7±3.4 71–8247.5±1.4 46–5055±4.2 50–6062.9±2.9 60–6875, 73, 73
Anterior end to guide ring38.1±1.9 35–4122.0±1.3 22–2426±1.1 25–2729.9±1.7 27–3336, 37, 35
Bulbus length118.5±7.9 105–13065.9±4.5 59–6971.8±3.4 75–8391.1±3.6 86–97104, 116, 101
Bulbus width23.4±1.8 20–2513.8±1.2 13–1416.6±0.5 16–1719.2±0.6 18–2022, 22, 21
Pharynx478.4±29.4 440.5 –528307.6±12.3 290–319352±12.9 338.5–364409.3±22.9 374–447480, 484, 455
Tail38.2±1.8 35 – 4245.4±4.2 42–51.543.5±2.9 40.5–4742.7±4.2 36–4841, 36, 38
Length of hyaline part11.7±0.9 10–139.5±0.6 9–108.5±0.6 8–99.3±1.2 8–119.5, 12, 8
Body diameter at: – lip region14.5±0.6 14–168.6±0.6 8–109.6±0.6 9–1011.1±0.3 11–1212, 14, –
– guide ring29.2±1.6 27–3215.3±0.7 14.5–1618.5±1.3 28–3121.1±1.2 19–2325, 29, 26
– base of pharynx48.4±3.3 44–5522.8±0.6 23–2429.2±1.3 28–3136.2±2.3 32–4039,47, 39
– mid–body/at vulva58.7±5.4 53–7123.8±0.8 23–2530.9±1.8 29–3338.9±2.7 33–41.544, 58, 43
– anus39.7±3.5 35–4616.1±0.6 15.5–1723±1.6 22–2529.5±2.4 25–3234, 37, 30
– hyaline part24.9±3.5 18–297.4±0.6 6.7–8.410.8±0.3 10.5–1116.1±1.5 14–18–, 25, 18

d, distance from the anterior end / body diameter at lip region. d’, body diameter at guide ring / body diameter at lip region (Brown et al., 1994).

Measurements of females and juvenile stages (J) of Longidorus piceicola from Cernica-Ilfov County, Romania (mean ± standard deviation, with range). All measurements in micrometers except body length (mm).

CharacterFemalesJ1J2J3J4
n911235
L5.88±0.19 5.17–6.541.36±0.09 1.21–1.521.79, 2.163.29, 3.04, 2.813.95±0.47 3.6–4.7
a95.2±11.5 73.8–105.558.96±4.9 53–66.864.1, 67.768.7, 67.7, 68.777±8.2 62.5–83.4
b10.2±1.2 8.4–12.74.88±0.8 4.1–6.78.4, 9, 6.69±1.5 6.9–10.6
c171.9±28.8 134.4–218.031.0±1.9 28.3–33.479, 71,64.3102±8.1 89.8–109.8
c’0.85±0.10 0.72–0.992.9±0.2 2.6–3.11.3, 1, 1.61±0.1 0.9–1.2
V (%)48.1±0.98 47.1–50.6
G1 (%)5.8±0.8 4.7–7.1
G2 (%)5.4±0.7 4.4–6.4
d2.9±0.1 2.7–3.12.9±0.2 2.6–3.32.78, 2.993, 3, 3.43±0.2 2.8–3.2
d’1.8±0.1 1.7–1.91.9±0.2 1.5–2.21.8, 1.72, 2, 22±0.1 1.7–2
Anterior end to guide ring42.2±1.8 40–4522.8±1.4 21–2625, 2934.8, 34, 3437.2±0.9 36–39
Odontostyle155.4±5.4 150–16586.9±2.7 82–9097, 102122, 124, 108136.8±3.4 132–141.5
Bulbus length135±4.9 126–14172.7±4.3 65–78.571, 86104, 104, 100113.7±5.9 108–120
Bulbus width24.7±2.0 22–2912.5±0.9 11–1415, 14.518, 21, 1919.9±2.1 17–21
Replacement odontostyle95.7±3.7 92–102109, 111142, 136, 132157.3±6.7 150–165
Odontophore78.1±4.9 70–8352.5±4.8 48–6555, 6072, 60, 6572.2±3.0 69–76
Oesophagus length579.3±47.6 514–661284.9±42.4 219–356320, 366393, 321,425460.3±84.3 345–545
Tail34.8±4.4 30–41.543.58±2.3 39–4742, 43, 4438.7±3.5 34–43
Length of hyaline part12.3±1.1 11–149.5±0.9 8–1110, 109, 10, 1010±0.6 9.4–11.1
Body diameter at: – lip region14.7±0.4 14–157.9±0.2 7.5–89, 1011, 11,1012.4±0.5 12–13
– guide ring26.1±1.2 24–2714.7±1.5 12–1816, 1620.5, 21, 2023.16±0.6 22.5–24
– base of pharynx53.6±6.1 45–6221.9±0.9 20–2325, 28.639, 38, 3843.5±3.0 38.9–46.4
– mid–body/at vulva63.2±4.5 58–7023.2±1.4 21–2628, 3248, 45, 4151.8±5.8 45–58
– anus40.8±2.1 38–4415.2±1.3 14–1831, 30, 2736±3.4 33.2–41.2
– hyaline part27.8±1.9 25–31.57.4±0.6 7–87, 818, 16, 1522±1.4 20–23

Measurements of Longidorus piceicola females (f) from Cernica, and juveniles (j) from Bran, Braşov County, Romania showing different anomalies. All measurements in micrometers except body length (mm).

Characterffjjjjjjjj
No1212345678
L5.955.864.732.342.722.712.621.143.662.71
a99.197.793.063.677.761.967.032.675.163.8
b9.510.35.66.05.97.12.97.96.2
c220.3172.498.860.565.261.961.470.3
c’0.750.941.31.31.61.41.71.2
V49.248.9
Developing gonade652227
d2.932.732.62.82.92.92.52.72.8
d’1.791.801.42.02.02.01.81.91.8
Odontostyle16515811712712210581106120125
Replacement odontostyle175158131165165135108130140156
Odontophore807078.5616565606073
Anterior end to guide ring41413530323325263232
Bulbus length132130114818789959310886
Bulbus width23232219182017
Pharynx627461420457464369387463441
Tail2734483942444339
Length of hyaline part118109969
Body diameter at: - lip region141514111111911.5
- guide ring252719.5212223111921
- base of pharynx51504235323832294032
- mid-body/at vulva605137354439354943
- anus60382926322432
- hyaline part2523201614151118
Sequences and phylogenetic analyses.

The amplification of the ITS and the D2-D3 expansion domains of the 28S rRNA gene yielded fragments of 1646 and 756 bps, respectively, based on sequencing. The ITS sequences of L. piceicola from Romania were obtained for the first time in the present study. They showed 98 % similarity (962/984 identities, 9 gaps) when compared with the corresponding sequence of L. intermedius (KT308890) and 86 % with the ITS sequence of L. elongatus Hooper, 1961 (AJ549986, AJ549987). Intraspecific variation for the ITS sequences was low, with only two nucleotides difference and no indels.

Longidorus piceicola Juveniles and female from Bran locality: Variations in tail shape of first (A1–A3), second (B1–B3), third (C1–C4), fourth (D1–D3) juvenile stages and female (E).

D2-D3 rDNA sequences obtained from both Romanian populations were identical to each other and to the sequence of L. piceicola from Slovakia (AY601577, He et al. 2005). The phylogenetic relationships of L. piceicola with several related species is presented in Figure 8. Longidorus intermedius revealed sister relationships with L. piceicola and the sequences from both species formed a well-supported clade. In addition, five sequences of L. intermedius from Germany (AF480074, Rubtsova et al. 2001), Russia (KF242311 and KF242312, Subbotin et al. 2014), Spain (KT308868, Gutiérrez-Gutiérrez et al 2013 and JX445117, Archidona-Yuste et al. 2016), and the L. piceicola sequence were realigned separately and pairwise distances estimated. A total of 737 positions was included in the dataset. The between species dissimilarities (p-distances) were 0.3–0.9 % (or 2–6 bp differences). Similarly, the intraspecific p-distances of L. intermedius from the three European countries were 0.4-0.9 % (i.e. 3–6 bp).

Longidorus piceicola Juveniles and female from Bran locality: A–E Anterior ends of first- to fourth-stage juveniles and female F–J Tails of first to fourth juvenile stages and female K–M Genital primordium of first to fourth juvenile stages. O Vagina. Scale bar: 20 μm.

The SNPs analysis comparing all D2-D3 sequences of L. piceicola and L. intermedius revealed three parsimony-informative sites (i.e. nucleotide positions with transitions 89T/C, 134T/C and 297A/G) when compared to the reference sequence of L. piceicola (AY601577) (Table 4). The most similar sequence to the L. piceicola sequence was that of L. intermedius from Germany, revealing the highest similarity and only two interspecies differentiating nucleotides at positions 89 and 134 compared to the reference sequence (Table 4).

Scatter plot of odontostyle (■) and replacement odontostyle (□) against body length of Longidorus piceicola juveniles (J1 to J4) and females from A Cernica forest, Ilfov county and B Bran locality, Braşov county.

Phylogenetic tree using D2-D3 28S rDNA and inferred from a Bayesian analysis with GTR+G model and midpoint rooting. Posterior probabilities ≥ than 0.8 are presented.

The variable positions in D2-D3 28S rDNA control region sequences of Longidorus piceicola and L. intermedius. The L. piceicola sequence from Slovakia (Acc. no AY601577) was used as a reference.

SNPositions
89129134197255285+1gap285+2gap297310413514584
AY601577 reference sequence T C T A C A T G G C
AY601577 L. piceicola Slovakia..........
KY086070 L. piceicola Romania 1..........
LT669801 L. piceicola Romania 2..........
AF480074 L. intermedius Germany C . C .......
JX445117 L. intermedius Spain C . C .TAT G G.S.
KT308868 L. intermedius Spain C . C .TAT G G.T.
KF242312 L. intermedius Russia C T C .. G .T.T
KF242311 L. intermedius Russia C . C C. G .T..
BrownDJFGrunderJHooperDJKuntzP (1994) Longidorus arthensis sp. n. (Nematoda: Longidoridae) a vector of cherry rosette disease caused by a new nepovirus in cherry trees in Switzerland. Nematologica 40: 133140. https://doi.org/10.1163/003525994X00094 DecraemerWCoomansA (2007) Revision of some species of the genus Paralongidorus sensu Siddiqi et al. (1993), with a discussion on the relationships within the family Longidoridae (Nematoda: Dorylaimida). Nematology 9: 64362. https://doi.org/10.1163/156854107782024776 HeYSubbotinSRubtsovaTVLambertiFBrownDJFMoensM (2005) A molecular phylogenetic approach to Longidoridae (Nematoda: Dorylaimida). Nematology 7: 111124. https://doi.org/10.1163/1568541054192108 RubtsovaTVSubbotinSABrownDJFMoensM. (2001) Description of Longidorus sturhani sp. n. (Nematoda: Longidoridae) and molecular characterisation of several longidorid species from Western Europe. Russian Journal of Nematology 9: 127136. SubbotinSARogozhinEAChizhovVN (2014) Molecular characterisation and diagnostics of some Longidorus species (Nematoda: Longidoridae) from Russia and other countries using rRNA genes. European Journal of Plant Pathology 138: 377390. https://doi.org/10.1007/s10658-013-0338-9 Gutiérrez‐GutiérrezCCantalapiedra‐NavarreteCMontes‐BorregoMPalomares‐RiusJECastilloP (2013) Molecular phylogeny of the nematode genus Longidorus (Nematoda: Longidoridae) with description of three new species. Zoological Journal of the Linnean Society 167(4): 473500. https://doi.org/10.1111/zoj.12019 Archidona-YusteANavas-CortésJACantalapiedra-NavarreteCPalomares-RiusJE (2016) Unraveling the biodiversity and molecular phylogeny of needle nematodes of the genus Longidorus (Nematoda: Longidoridae) in olive and a description of six new species. PLoS ONE 11(1): e0147689. https://doi.org/10.1371/journal.pone.0147689