Tanga et al. 10.1073/pnas.0501634102.

Supporting Information

Files in this Data Supplement:

Supporting Table 1
Supporting Table 2
Supporting Figure 7




Table 1. Primer and TaqMan probe sequences for the mouse genes characterized in this experiment

Genes

Forward primers

Reverse primers

Probes*

GenBank

accession no.

GAPDH

GGGAAGCTCACTGGCATGG

CTTCTTGATGTCATCATACTTGGCAG

TCCTACCCCCAATGTGTCCGTCGTG

XM_111622

CD11b (ITGAM)

GACCCTGTCCGCTCACGTATC

TCCACGCAGTCCGGTAAAATT

AACAACACACGCAGGCGCACCC

NM_008401

TLR4

AAACTTGCCTTCAAAACCTGGC

ACCTGAACTCATCAATGGTCACATC

CACGTCCATCGGTTGATCTTGGGAGAA

AF185285

CD14

CCAGTCAGCTAAACTCGCTCAATC

TCCAGCCTGTTGTAACTGAGATCC

AAGGGCTGCCAGCCAAGCTCAGC

BC057889

GFAP

GAGCGTGCAGAGATGATGGAG

TTCAGTTCAGCTGCCAGCG

ATCGAGAAGGTCCGCTTCCTGGAACAG

AF332062

IL-1β

GAAAGACGGCACACCCACC

AGACAAACCGCTTTTCCATCTTC

TGCAGCTGGAGAGTGTGGATCCCAA

M15131

TNF-α

GTTCTCTTCAAGGGACAAGGCTG

TCCTGGTATGAGATAGCAAATCGG

TACGTGCTCCTCACCCACACCGTCA

NM_013693

INF-γ

GATGCATTCATGAGTATTGCCAAGT

TTCCGGCAACAGCTGGTG

CAACCCACAGGTCCAGCGCCAAG

NM_008337

*The TaqMan probe has a reporter fluorescent dye, 6-carboxyfluorescein (FAM), at the 5' end, and a fluorescence dye quencher, 6-carboxytetramethylrhodamine (TAMRA), at the 3' end.





 

Table 2. Primer and TaqMan probe sequences for the rat genes characterized in this experiment

Genes

Forward primers

Reverse primers

Probes*

GenBank accession no.

GAPDH

CCCCCAATGTATCCGTTGTG

TAGCCCAGGATGCCCTTTAGT

TGCCGCCTGGAGAAACCTGCC

NM_01008

CD11b (ITGAM)

CTGCCTCAGGGATCCGTAAAG

CCTCTGCCTCAGGAATGACATC

CCCGGGACAATGCCGCGAA

U59801

TLR4

GATTGCTCAGACATGGCAGTTTC

CACTCGAGGTAGGTGTTTCTGCTAA

TCCTTGCTGAGGCAGCAGGTCGAAT

NM_0191178

CD14

GCAAACAGGTCGGCGTCTT

TGCGCAGCGCTAAAACTTG

TGATCTCGGCCCTCTGTCCGCA

AF087943

GFAP

TGGCCACCAGTAACATGCAA

CAGTTGGCGGCGATAGTCAT

CAGACGTTGCTTCCCGCAACGC

NM_017009

IL-6

GGGACTGATGTTGTTGACAGCC

CATATGTAATTAAGCCTCCGACTTGTG

TCACAGAGGATACCACCCACAACAGACCAG

NM_012589

IL-1b

GGAAGGCAGTGTCACTCATTGTG

GGTCCTCATCCTGGAAGCTCC

AAGCTGTGGCAGCTACCTATGTCTTGCCC

NM_031512

TNFa

CCCCGACTATGTGCTCCTCAC

AGGGCTCTTGATGGCGGA

CACACCGTCAGCCGATTTGCCACTT

AF329987

*The TaqMan probe has a reporter fluorescent dye, 6-carboxyfluorescein (FAM), at the 5' end, and a fluorescence dye quencher, 6-carboxytetramethylrhodamine (TAMRA), at the 3' end.





Supporting Figure 7

Fig. 7. Fluorescent-labeled confocal image of FITC-labeled oligonucleotide and DAPI-stained nuclei. This representative photomicrograph depicts the cellular uptake of FITC-labeled oligonucleotide. Twenty micrograms of FITC-labeled random oligonucleotide was injected intrathecally by means of lumbar puncture in three rats. The rats were killed at 4, 8, and 12 h after injection. Thirty-micrometer sections were colabeled with the specific nucleus marker DAPI, which is known to form fluorescent complexes with natural double-stranded DNA. The optimal cellular uptake of the FITC-labeled oligonucleotide (full arrow) was observed 8 h after injection in the proximity of nuclei (asterisk).