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["Supplementary Table 1:  Detailed characteristics and sequences of the probes included in the A3B+ MLPA assay"]
[]
["probe id","probe location (hg19)","5'PSS","length","5'SS","length","5'TSS","length","Tm","3'TSS","length","Tm","3'SS","length","3'PSS","length","5'HPL","3'HPL ","TPL"]
["ctrl_1 ","chr22:30,069,296-30,069,338","GGGTTCCCTAAGGGTTGGA",19,"cgctac",6,"GGCCCAGATCACCGAGGAGGA",21,"75.6","GGCAAAACTTCTGGCCCAGAAG",22,"71.0","ac",2,"TCTAGATTGGATCTTGCTGGCGC",23,46,47,93]
["A3B_2","chr22:39,388,023-39,388,071","GGGTTCCCTAAGGGTTGGA",19,"cgct",4,"CCCTGTCCCTTTTCAGAGTTTGAGT",25,"70.2","ACTGCTGGGACACCTTTGTGTACC",24,"70.4","c",1,"TCTAGATTGGATCTTGCTGGCGC",23,48,48,96]
["A3A_2","chr22:39,357,843-39,357,886","GGGTTCCCTAAGGGTTGGA",19,"cgctactact",10,"AGATGTGGGCCCAGGGAGGGC",21,"77.1","AGGGAGAGTGGCTGGAAGTGGAA",23,"71.67","tac",3,"TCTAGATTGGATCTTGCTGGCGC",23,50,49,99]
["A3A_f3'_3","chr22:39,377,756-39,377,804","GGGTTCCCTAAGGGTTGGA",19,"cgcta",5,"CTGTTTATAGACACCCTTCTCCCTTCC",27,"70.04","TTGGTGTCGCAGACATCGCAGT",22,"70.95","atctac",6,"TCTAGATTGGATCTTGCTGGCGC",23,51,51,102]
["A3A_f3'_1","chr22:39,362,163-39,362,209","GGGTTCCCTAAGGGTTGGA",19,"cgctactact",10,"CAGACCCCAGAATCAGAGACTGAG",24,"70.1","GAGTCAAAGACAGGCAGGAGACG",23,"70.8","atctac",6,"TCTAGATTGGATCTTGCTGGCGC",23,53,52,105]
["A3B_f3'_1","chr22:39,391,228-39,391,279","GGGTTCCCTAAGGGTTGGA",19,"cgctactact",10,"CTCCCCATTCATCTGCAAAGTGAGT",25,"70.8","CTAGGGAGGTTCTTGTGATTCTTTGGC",27,"71.6","ctac",4,"TCTAGATTGGATCTTGCTGGCGC",23,54,54,108]
["ctrl_2 ","chr1:156,105,818-156,105,862","GGGTTCCCTAAGGGTTGGA",19,"cgctactactat",12,"CAGCTGGACGAGTACCAGGAGCTT",24,"72.8","CTGGACATCAAGCTGGCCCTG",21,"72.7","aactaaatctac",12,"TCTAGATTGGATCTTGCTGGCGC",23,55,56,111]
["A3B_1","chr22:39,382,626-39,382,676","GGGTTCCCTAAGGGTTGGA",19,"cgctactactat",12,"CTCTAAGGCACCTGGGTCTTGGACTA",26,"72.4","GAGGAACAAACAGCAAGACAGGGTG",25,"72.3","taaatctac",9,"TCTAGATTGGATCTTGCTGGCGC",23,57,57,114]
["A3A_f3'_2","chr22:39,367,085-39,367,132","GGGTTCCCTAAGGGTTGGA",19,"cgctactactattag",15,"GAGATGAGCTTTCCATGACGACCAA",25,"71.4","GGTGGAGGAGTCAGATTCTGGGT",23,"71.34","aactaaatctac",12,"TCTAGATTGGATCTTGCTGGCGC",23,59,58,117]
["A3B_f3'_2","chr22:39,397,215-39,397,269","GGGTTCCCTAAGGGTTGGA",19,"cgctactactattag",15,"CCACTCTTACTCCCTTTCATCCCGTA",26,"71.3","ACACGTAGCTCTACTAGCCTGCTATTGGG",29,"71.48","aaatctac",8,"TCTAGATTGGATCTTGCTGGCGC",23,60,60,120]
["ctrl_5","chr2:109,545,794-109,545,837","GGGTTCCCTAAGGGTTGGA",19,"cgctactactattagtagaat",21,"AGTCCTGTGGCTACGGCACCAA",22,"71.8","AGACGAGGACTACGGCTGCGTC",22,"71.8","ggtcaaactaaatctac",17,"TCTAGATTGGATCTTGCTGGCGC",23,62,62,124]
["A3A_1","chr22:39,353,593-39,353,648","GGGTTCCCTAAGGGTTGGA",19,"cgctactactattagta",17,"GCTCCTGAATCCTAAGAGAATGTTGGTG",28,"71.4","AAGATCTTAACACCACGCCTTGAGCAAG",28,"71.6","aaactaaatctac",13,"TCTAGATTGGATCTTGCTGGCGC",23,64,64,128]
[]
["Legend:"]
["5'PSS, 3'PSS - 5' and 3' primer-specific sequence, respectively"]
["5'SS, 3'SS - 5' and 3' stuffer sequence, respectively"]
["5'TSS, 3'TSS - 5' and 3' target-specific sequence, respectively"]
["Tm - melting temperature"]
["5'HPL, 3'HPL - 5' and 3' half-probe length"]
["TPL - total probe length"]
[]
["SALSA PCR Forward primer (Labeled):  *GGGTTCCCTAAGGGTTGGA"]
["SALSA PCR Reverse primer (Unlabeled): GTGCCAGCAAGATCCAATCTAGA"]
["AC# V00604   Phage M13 genome"]
["position: 3-99"]
["5'-cgctactactattagtagaattgatgccaccttttcagctcgcgccccaaatgaaaatatagctaaacaggttattgaccatttgcgaaatgtatctaatggtcaaactaaatctac-3'"]

{"sheet":"Arkusz2","index":1,"n_rows":0,"n_cols":0,"rows_kept":0,"cut":false,"hidden":false,"merged":[]}

{"sheet":"Arkusz3","index":2,"n_rows":0,"n_cols":0,"rows_kept":0,"cut":false,"hidden":false,"merged":[]}