{"text_format":"2","workbook":"xlsx","n_sheets":9,"sheets":["Info","fusA","fusA-cpxA","fusA-cyaA","fusA-rpoD","fusA-topA","cpxA","cyaA","rpoD"],"not_rendered":{"charts":0,"images":0,"macros":0,"external_links":0,"defined_names":0,"comments":0,"pivot_tables":0},"unopened":[],"bounds":{"document_bytes":16777216,"sheet_cells":100000,"run_cost":"one","rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0,"cell_chars":16384,"cell_head_chars":4096},"cells_cut":0,"cells_raw":0,"read":"whole","date_system":"1900"}

{"sheet":"Info","index":0,"n_rows":17,"n_cols":2,"rows_kept":17,"cut":false,"hidden":false,"merged":[]}
["# This file contains log2 fold changes of all genes in the different kanamycin resistant mutants (calculated wrt the wildtype)."]
["# Each mutant has its own sheet."]
["# List was produced using edgeR topTags function."]
["# List of de genes can be found by using a cutoff of 0.001 on the FDR column of these lists."]
["# Genes are ordered by FDR"]
[]
["Name of sheet","Mutant"]
["fusA","FusAA608E"]
[]
["fusA-cpxA","FusAA608E-CpxAF218Y"]
["fusA-cyaA","FusAA608E-CyaAN600Y"]
["fusA-rpoD","FusAA608E-RpoDL261Q"]
["fusA-topA","FusAA608E-TopAS180L"]
[]
["cpxA","CpxAF218Y"]
["cyaA","CyaAN600Y"]
["rpoD","RpoDL261Q"]

{"sheet":"fusA","index":1,"n_rows":4043,"n_cols":5,"rows_kept":4043,"cut":false,"hidden":false,"merged":[]}
["genes","logFC","logCPM","PValue","FDR"]
["fliC",-3.33353855916269,11.2255033866391,3.35334695324983E-075,1.35542283850358E-071]
["tsr",-3.21831512864833,8.66466880938953,6.81463094362353E-061,1.37723691370632E-057]
["cheA",-2.64041994935069,7.65455608187621,2.7066628597787E-037,3.64677709307517E-034]
["tap",-3.44613891184977,6.75835197643954,6.4803310255553E-034,6.54837450132363E-031]
["cheY",-3.18738141699266,6.05342713345313,4.05590856593206E-029,2.91455454941202E-026]
["tar",-3.33000109467569,7.13202717060701,4.46857729531958E-029,2.91455454941202E-026]
["yhjH",-3.42313931736411,5.98233664662675,5.04747200541418E-029,2.91455454941202E-026]
["flgL",-2.13149502151463,7.83295142677196,2.88181825335492E-026,1.45603867250757E-023]
["cheZ",-3.06310895893566,6.08618985771268,1.21453035478728E-024,5.45459077116689E-022]
["motA",-2.29648370293783,6.94794637467388,2.49274811047858E-023,1.00756878625544E-020]
["flgK",-1.78482986479981,8.47122917706207,3.21715416494181E-022,1.18215792133589E-019]
["cheW",-2.56252883434628,6.15387105590964,1.5402584321034E-021,5.18810381880163E-019]
["cheR",-3.02511180519992,5.4349712838216,2.00583758625225E-019,6.23661194125508E-017]
["cydX",-2.09234628618994,7.06042319392274,1.57482131917424E-018,4.54673412293021E-016]
["nanA",2.34159186657915,6.15814586053113,5.78245268651697E-016,1.55817825059344E-013]
["cheB",-2.71503716950978,5.44699376084208,9.3992765399002E-014,2.37449223589229E-011]
["yddA",2.36864019662606,4.78233239630989,5.18904504378877E-013,1.23377176864672E-010]
["entE",2.44895216923808,5.28144136366194,5.50473687933527E-012,1.23611924812629E-009]
["cirA",2.4644884989343,6.46623621464083,5.86356155276607E-012,1.24739556822529E-009]
["leuB",2.12694262982182,5.74571683444636,9.66106816134604E-012,1.95250187540803E-009]
["yjjL",-1.64204488520397,6.21194810133007,1.4403448570547E-011,2.77232091057861E-009]
["fiu",2.07542346650076,6.08532763659896,5.75089558519242E-011,1.03481219354593E-008]
["nrdD",-1.63124389006848,7.83427668523279,5.88834251646622E-011,1.03481219354593E-008]
["carB",-1.34508673817195,7.38436331991771,9.09383721313785E-011,1.53155375064597E-008]
["ilvM",2.34136927142975,4.61673132138674,2.45564570567262E-010,3.97028797693149E-008]
["entC",3.13286210970969,5.04952299087821,8.68532458906567E-010,1.35023392265398E-007]
["fliD",-1.31380107939464,7.51579148955883,9.11201421697392E-010,1.3641022764818E-007]
["motB",-2.26765062568816,6.46765272336659,2.00846877254301E-009,2.89936813522102E-007]
["cydA",-1.51491355565023,10.0814738048957,2.53818742268709E-009,3.53770812500043E-007]
["nanT",2.33759065153156,5.03642685563945,4.08879763947548E-009,5.50897335291996E-007]
["flu",-1.38926103201284,8.6949133935163,4.94684280359368E-009,6.45004471358892E-007]
["cydB",-1.37417874602609,9.72042419352762,7.04803922719656E-009,8.90255454885266E-007]
["fliS",-1.43669545788727,5.82936505133017,7.2763565045625E-009,8.9124342398308E-007]
["stpA",-1.85567757931355,5.71160135654154,9.57496120610525E-009,1.1175552483891E-006]
["fliT",-1.5939857301996,5.44221480181236,9.67699992420052E-009,1.1175552483891E-006]
["ilvD",1.12196829849386,6.91032878858235,1.90123001469589E-008,2.13465881094466E-006]
["yddB",1.53077815315623,5.65490137001949,2.0223329175055E-008,2.20926206825871E-006]
["fes",2.52332029471455,3.65617433315439,2.1299671168473E-008,2.26561239113073E-006]
["kdpA",-2.18620369331516,3.48335179482418,2.38486164807849E-008,2.47169507218802E-006]
["cspC",-1.06152728664979,9.34163286480115,3.55326908528862E-008,3.59057841068415E-006]
["ompX",-0.93370445018603,11.2395627012379,3.65994227779121E-008,3.60816748459319E-006]
["pta",-0.908167269806608,10.6416053317517,6.2707592968992E-008,6.00962242638283E-006]
["yagF",1.96084345697074,5.25888814141764,6.39321534721578E-008,6.00962242638283E-006]
["yodB",2.31089225882674,4.48062831118836,7.14527078759062E-008,6.56390557350938E-006]
["fdnG",-1.88947204385708,9.75210775209545,1.20281346164821E-007,1.05937462283936E-005]
["lpp",-0.963189380554788,12.5896674985784,1.20562178749655E-007,1.05937462283936E-005]
["pflB",-1.45149613420765,12.3058306436141,3.04794955904743E-007,2.62123662078079E-005]
["flgG",-1.05690897352518,8.75835597120962,3.60394973190217E-007,3.03482600340595E-005]
["leuC",1.41796025858585,5.98830388585257,4.10521631294014E-007,3.35747568402935E-005]
["napD",-2.0570113807885,5.97736763995891,4.15323563091211E-007,3.35747568402935E-005]
["leuA",1.50985983059228,5.99852427061995,4.31779122576501E-007,3.42206120285141E-005]
["fimA",-0.922719032811293,7.88029309788997,5.55048260729877E-007,4.27519116368705E-005]
["ilvX",2.79251102002124,2.82964951830369,5.60576773071286E-007,4.27519116368705E-005]
["sucD",1.19837733624686,7.07952034990389,5.97166071345117E-007,4.46989863032771E-005]
["flxA",-2.10442740769924,5.64908988270671,8.8308888614978E-007,6.43715254144231E-005]
["menC",-0.891860715772631,7.1589800854737,8.91837066602596E-007,6.43715254144231E-005]
["ldtE",1.34987353228178,5.21885822784943,1.10420035297969E-006,7.83013653814721E-005]
["fepA",1.72517568721772,5.55003481703481,1.34258131012097E-006,9.35640285432582E-005]
["rrrQ",6.87305624043048,2.34305627560165,1.52101309199728E-006,0.000104202286743271]
["fdnI",-1.7350539484594,6.39198936645948,1.61445725373201E-006,0.000108760603659746]
["nikA",-1.93497927580673,6.41980771495993,1.75814900177001E-006,0.000116498987953351]
["glyA",-0.757843093139332,8.1207191316058,2.31350966812143E-006,0.00015082590449269]
["sucC",1.17335245841042,7.30721449842436,2.60650090329834E-006,0.000167229788113205]
["eno",-0.732597824549579,11.5560755452967,2.86547359191164E-006,0.000180035939821269]
["lpd",-0.704880239333664,12.1870081950812,2.89518458396399E-006,0.000180035939821269]
["yqaE",-2.02249181809741,3.33034644464826,3.74035377135907E-006,0.000229068332482324]
["glmS",-0.859448425143351,9.89829634150127,4.19544123756137E-006,0.000253104081824224]
["ybgE",-1.05735983359394,6.97835981703315,4.47846362016998E-006,0.000265683709660989]
["yghJ",-1.11342667769736,9.1301289840615,4.53542206002182E-006,0.000265683709660989]
["mqo",1.49422328756915,5.70872554234072,4.89006587370491E-006,0.000282366375164503]
["aceF",-0.792275013504634,12.9926011630611,5.39704350812853E-006,0.000307251406476838]
["fepD",1.75813867516275,4.20063280198103,5.60666570257146E-006,0.000314751982913804]
["lldD",1.99766342992105,3.90041148819413,7.50934245063032E-006,0.000415791262814353]
["ilvE",0.881356086772288,6.6003850601333,8.25909799765166E-006,0.000451125325763622]
["menB",-0.732087171245873,7.53501330360225,8.37745601293586E-006,0.00045148902939049]
["yncJ",1.98301893562385,2.69199438145051,9.17548272683897E-006,0.000487990805024778]
["narJ",-2.37924399391635,6.84343787148066,9.33125246853745E-006,0.000489830162049719]
["fepB",1.53160707682324,4.60241411656355,9.79834946473686E-006,0.000507755494057261]
["tnaA",3.30650564766297,5.91927741636904,1.10531683195147E-005,0.000565530460094662]
["rpiA",-1.04276085759696,7.48848386937341,1.15243888478853E-005,0.000582269746539407]
["yecJ",1.29555431095206,4.05664839003347,1.23243232609493E-005,0.000614998945935273]
["dsdA",2.49881172786622,5.98972315518979,1.26090021025959E-005,0.000615925726562762]
["pstC",-1.25753781934946,4.27708745697459,1.26476584128425E-005,0.000615925726562762]
["ompW",-1.63976054633477,4.89853907947975,1.3019445883732E-005,0.000626483336452915]
["arpA",1.68836540627395,4.45505300345227,1.48711678296153E-005,0.000707167769027118]
["ynjE",-1.62163289200416,6.2699120970483,1.66736071038594E-005,0.00078365953388139]
["narG",-2.51692042704972,11.5390530735538,1.73924399370051E-005,0.000808048761211204]
["yhbU",-2.35697354054132,7.03867600998365,1.76604277966489E-005,0.000811175558568803]
["narI",-2.36108295651765,6.12683295752461,2.06719630607073E-005,0.000930623417848829]
["ompC",-0.736345259963631,13.1636828414251,2.08738439581634E-005,0.000930623417848829]
["fhuC",1.16336892480821,6.32653665674731,2.09516900109459E-005,0.000930623417848829]
["ttdT",1.10422975766603,5.48516809512952,2.25093096056064E-005,0.000988941624194142]
["yhcH",1.96714534020629,4.17945446120312,2.35034526592579E-005,0.00102151565213678]
["yhjG",-1.82980041087676,5.82002794849839,2.4738302687481E-005,0.00106374701556168]
["ychH",-1.94006904495087,5.20874909392076,2.70641026795774E-005,0.00115150634769318]
["codA",-0.79924310970122,6.29928021419986,2.75655299607139E-005,0.00116062366772089]
["pykF",-0.674399078778509,10.159177854276,3.61887614533335E-005,0.00150798942056056]
["ompA",-0.630067687776177,13.3193825432042,3.86256170565695E-005,0.00159310963410872]
["treA",1.97974518627449,3.89487204976865,3.98111584446397E-005,0.00161186786651418]
["narH",-2.26917113173451,8.8586881227193,3.98779778949575E-005,0.00161186786651418]
["aer",-1.29485232314959,5.08525237720639,4.25543373579712E-005,0.00170301615446455]
["lysU",-1.00099946406204,8.60599508866842,4.57539138844787E-005,0.00181311097961826]
["yhcC",-1.58014057897396,4.31925525967782,4.70135804943549E-005,0.00184494070250663]
["recX",1.40468989758429,4.18605958913989,4.90898597245423E-005,0.00190789627890962]
["fhuD",1.17087356685297,6.27308799742425,5.01566111694905E-005,0.00193079068901981]
["napF",-1.62738380424541,7.28075148223363,5.81520466427024E-005,0.00221745823141324]
["narK",-2.16512762698383,10.2408265785659,5.90252538174575E-005,0.00222972033579592]
["ydhS",1.51762467288227,4.17257274189178,5.97294246124496E-005,0.00223542902114372]
["thrL",-1.96865730765519,2.95128972540069,6.64509978655014E-005,0.00246417370066382]
["maeB",1.05091202633883,7.09980671409698,7.23566137756002E-005,0.00265877666255433]
["fdnH",-1.53006291364447,7.42728080913416,7.42695550665931E-005,0.00270448235656909]
["carA",-1.13491953319828,6.44159738660582,7.98172404401342E-005,0.00287034916033142]
["purA",-0.841153056763345,9.59059017401365,8.0244793448157E-005,0.00287034916033142]
["nanK",2.19664637869663,4.0088069568629,8.10107749856016E-005,0.00287232940782282]
["phoU",-1.10388078769685,5.78324806191152,8.64576813455745E-005,0.00302937795895137]
["leuD",1.30978258259594,5.11087112692053,8.69391002568925E-005,0.00302937795895137]
["pheA",0.740295901600976,6.82619414623838,8.81069795412682E-005,0.0030438325752633]
["glnB",-0.743463188498732,5.81386953503403,9.19783864275279E-005,0.00315064947406837]
["entF",1.15846550818585,5.22051734141079,9.29156814178469E-005,0.00315600995202468]
["nrdB",-0.760596924545337,7.98537905419547,0.000100842127136141,0.00339669898236903]
["flgI",-0.866780133698383,7.76038093434079,0.000106756161812938,0.00356618517394956]
["bluF",1.80361034188003,4.19033778120475,0.000110153299338573,0.00363469601788361]
["fliJ",-0.969422512491753,5.93016398072071,0.00011060554433441,0.00363469601788361]
["yfhR",1.57295439714738,4.14134393127757,0.0001180129226162,0.00384684059044097]
["fliK",-0.875853959801664,6.7375413963333,0.00011937450471422,0.00386009398443903]
["ptsH",-0.674743801699537,10.0000551482051,0.000126745731839351,0.00406592260392586]
["flgH",-0.815056498753926,7.50486276082644,0.000128196117257908,0.0040800685508383]
["grcA",-1.3327724007539,9.53916618110169,0.000131240589095739,0.00413831196814974]
["ycgJ",-0.957688634380143,5.00285603795425,0.000132073786217545,0.00413831196814974]
["yfiM",1.10150026655722,6.312174910601,0.000134561188929443,0.00416980726249373]
["hokA",1.90970446076862,4.96280896061604,0.000135142194801256,0.00416980726249373]
["yghA",1.78250729770233,2.89245513195616,0.000142524837495658,0.00436428328149584]
["fepG",1.40405919060828,4.05324226786477,0.000145696204047463,0.0044278500508259]
["fhuA",1.19957236598517,9.52905742743149,0.000152748997571862,0.00460754812078707]
["gatD",2.54013042655411,6.12865652682603,0.000159120872455185,0.00476419678862117]
["napA",-1.5723516829852,9.11027987738163,0.000162073265094307,0.00481691277581756]
["pflA",-0.993433736132185,6.27825929327372,0.000163353782252472,0.00481953275813499]
["pstB",-0.934942357450111,5.60550573534459,0.000166978955942365,0.00488564644248758]
["ecnA",1.02312029401515,5.42700452312006,0.000169026587521834,0.00488564644248758]
["ynfK",-1.40053860974916,6.86740144184341,0.000170876654273668,0.00488564644248758]
["dppD",1.60390222696506,3.4665560885182,0.000171535679966783,0.00488564644248758]
["xylR",0.872160892790208,5.22361227143505,0.000172708101912795,0.00488564644248758]
["tpiA",-0.941727896367845,9.44761438492546,0.000172846967163712,0.00488564644248758]
["yfcE",-0.818332691107604,5.59732827819752,0.000174147280361133,0.00488821741124791]
["gnd",-0.602822740988322,10.2609759825445,0.000190560747776112,0.00527621836948984]
["ygiB",0.626081457409243,7.51314319361613,0.000190580871337337,0.00527621836948984]
["aspA",-1.8451500632472,10.7517884107493,0.000194382335878201,0.00534485307224277]
["lldP",1.61244650022591,4.05669764277373,0.000198463835374788,0.00542020826070872]
["putA",1.10832457597806,4.86566984104997,0.000199842098955189,0.00542121989246224]
["eco",-0.80717381407954,5.99920804603546,0.000206872473176419,0.00557452357719392]
["potD",-0.55732942609323,8.95026478433985,0.000220150795005516,0.00589304313518076]
["yihL",-2.13114287182328,6.17091591321368,0.000223533503027317,0.00593220794443343]
["yqgA",-1.61327938022737,5.48845774514184,0.000224549187406807,0.00593220794443343]
["glmU",-0.597685309610736,9.06995244963889,0.000229105157189242,0.00601326652830466]
["flgF",-1.15352348123211,8.74321600509838,0.000233785793356428,0.00609653017255923]
["menE",-0.679836889663553,7.15937266562357,0.000244309831269671,0.00633013037174366]
["dsbA",-0.686579136047994,7.71214874320934,0.000249422879649092,0.00642144764039254]
["flhE",-1.13998948318195,5.05472629935687,0.000255845518730166,0.00654511130827426]
["ttdR",-2.36055750529902,5.54350910538796,0.000261868456661863,0.00663633501514215]
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["ydgH",-0.628368672045767,7.05430202209454,0.000269098122000192,0.00675586713742097]
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{"sheet":"fusA-cyaA","index":3,"n_rows":4043,"n_cols":5,"rows_kept":4043,"cut":false,"hidden":false,"merged":[]}
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{"sheet":"fusA-rpoD","index":4,"n_rows":4043,"n_cols":5,"rows_kept":4043,"cut":false,"hidden":false,"merged":[]}
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{"sheet":"fusA-topA","index":5,"n_rows":4043,"n_cols":5,"rows_kept":4043,"cut":false,"hidden":false,"merged":[]}
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{"sheet":"cpxA","index":6,"n_rows":4043,"n_cols":5,"rows_kept":4043,"cut":false,"hidden":false,"merged":[]}
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{"sheet":"cyaA","index":7,"n_rows":4043,"n_cols":5,"rows_kept":4043,"cut":false,"hidden":false,"merged":[]}
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{"sheet":"rpoD","index":8,"n_rows":4043,"n_cols":5,"rows_kept":4043,"cut":false,"hidden":false,"merged":[]}
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