Peak Name	Chr	Start	End	Annotation	Detailed Annotation	Distance to TSS	Nearest Ensembl	Gene Name	Gene Description	Naive	IR	NIR
Merged-chr2-241075768-2	chr2	241075520	241076019	promoter-TSS (NM_001163424)	promoter-TSS (NM_001163424)	5	ENSG00000172428	MYEOV2	myeloma overexpressed 2	8.84	20.97	27.72
Merged-chr5-159848813-2	chr5	159848564	159849063	promoter-TSS (NM_004219)	promoter-TSS (NM_004219)	1	ENSG00000164611	PTTG1	pituitary tumor-transforming 1	6.35	18.97	17.85
Merged-chr10-8458456-2	chr10	8458208	8458707	Intergenic	Intergenic	148189	ENSG00000232170	LINC00708	long intergenic non-protein coding RNA 708	4.53	17.97	16.33
Merged-chr5-176074302-2	chr5	176074054	176074553	promoter-TSS (NM_130465)	promoter-TSS (NM_130465)	85	ENSG00000048140	TSPAN17	tetraspanin 17	11.79	30.62	36.08
Merged-chr8-49427284-2	chr8	49427036	49427535	Intergenic	CpG	36842	ENSG00000253608	LOC101929268	uncharacterized LOC101929268	3.85	10.98	14.43
Merged-chr2-242813538-2	chr2	242813289	242813788	"intron (NM_173821, intron 1 of 1)"	"intron (NM_173821, intron 1 of 1)"	-1652		RTP5	receptor (chemosensory) transporter protein 5 (putative)	3.17	23.63	19.75
Merged-chr17-16894898-2	chr17	16894650	16895149	Intergenic	Intergenic	19497	ENSG00000240505	TNFRSF13B	"tumor necrosis factor receptor superfamily, member 13B"	2.72	7.66	8.73
Merged-chr17-6918328-2	chr17	6918079	6918578	TTS (NR_037715)	TTS (NR_037715)	-272	ENSG00000258315	C17orf49	chromosome 17 open reading frame 49	14.06	30.62	34.56
Merged-chr1-32757605-2	chr1	32757357	32757856	promoter-TSS (NM_004964)	promoter-TSS (NM_004964)	102	ENSG00000116478	HDAC1	histone deacetylase 1	16.1	34.95	36.46
Merged-chr12-129308605-2	chr12	129308357	129308856	promoter-TSS (NM_145648)	promoter-TSS (NM_145648)	65	ENSG00000139370	SLC15A4	"solute carrier family 15 (oligopeptide transporter), member 4"	5.9	15.31	17.09
Merged-chr12-95335473-2	chr12	95335224	95335723	Intergenic	Intergenic	-62016	ENSG00000184752	NDUFA12	"NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12"	2.27	21.3	11.39
Merged-chr1-192578399-2	chr1	192578150	192578649	Intergenic	MLT1N2|LTR|ERVL-MaLR	26869	ENSG00000127074	RGS13	regulator of G-protein signaling 13	6.12	12.98	13.29
Merged-chr1-151918463-2	chr1	151918215	151918714	Intergenic	Intergenic	36103		THEM4	thioesterase superfamily member 4	3.17	18.64	18.99
Merged-chr1-184356339-2	chr1	184356091	184356590	"5' UTR (NM_030806, exon 1 of 6)"	"5' UTR (NM_030806, exon 1 of 6)"	-190	ENSG00000116667	C1orf21	chromosome 1 open reading frame 21	1.13	18.31	21.65
Merged-chr22-39486803-2	chr22	39486555	39487054	Intergenic	Intergenic	6425	ENSG00000100298	APOBEC3H	"apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H"	9.3	32.95	27.34
Merged-chr11-66623974-2	chr11	66623726	66624225	promoter-TSS (NM_024036)	promoter-TSS (NM_024036)	901	ENSG00000173621	LRFN4	leucine rich repeat and fibronectin type III domain containing 4	3.4	12.65	15.95
Merged-chr12-132568762-2	chr12	132568514	132569013	promoter-TSS (NR_003290)	promoter-TSS (NR_003290)	65	ENSG00000185684	EP400NL	EP400 N-terminal like	10.43	24.3	22.03
Merged-chr22-36851243-2	chr22	36850995	36851494	Intergenic	CpG	-26443	ENSG00000100348	TXN2	thioredoxin 2	17	39.28	36.46
Merged-chr1-55352904-2	chr1	55352656	55353155	promoter-TSS (NM_014762)	promoter-TSS (NM_014762)	-16	ENSG00000116133	DHCR24	24-dehydrocholesterol reductase	7.48	23.3	29.62
Merged-chr21-30671367-2	chr21	30671118	30671617	promoter-TSS (NM_206866)	promoter-TSS (NM_206866)	-147	ENSG00000156273	BACH1	"BTB and CNC homology 1, basic leucine zipper transcription factor 1"	8.62	19.31	23.55
Merged-chr12-70443967-2	chr12	70443719	70444218	Intergenic	LTR16E2|LTR|ERVL	192806	ENSG00000111596	CNOT2	CCR4-NOT transcription complex subunit 2	3.85	25.63	22.03
Merged-chr1-222013327-2	chr1	222013078	222013577	Intergenic	Intergenic	97809	ENSG00000143507	DUSP10	dual specificity phosphatase 10	2.04	18.64	14.81
Merged-chr3-52188674-2	chr3	52188426	52188925	promoter-TSS (NM_001161580)	promoter-TSS (NM_001161580)	-31	ENSG00000164087	POC1A	POC1 centriolar protein A	8.84	24.3	17.85
Merged-chr10-103880251-2	chr10	103880003	103880502	promoter-TSS (NM_001113407)	promoter-TSS (NM_001113407)	42	ENSG00000198728	LDB1	LIM domain binding 1	7.94	19.97	16.71
Merged-chr14-68086523-2	chr14	68086275	68086774	promoter-TSS (NM_001172)	promoter-TSS (NM_001172)	55	ENSG00000081181	ARG2	arginase 2	10.88	22.97	28.86
Merged-chr12-122712109-2	chr12	122711861	122712360	promoter-TSS (NM_019887)	promoter-TSS (NM_019887)	29	ENSG00000184047	DIABLO	"diablo, IAP-binding mitochondrial protein"	5.67	16.98	22.03
Merged-chr1-158894677-2	chr1	158894428	158894927	Intergenic	Intergenic	6660	ENSG00000163564	PYHIN1	"pyrin and HIN domain family, member 1"	2.49	10.98	7.98
Merged-chr11-76777878-2	chr11	76777629	76778128	promoter-TSS (NM_004055)	promoter-TSS (NM_004055)	114	ENSG00000149260	CAPN5	calpain 5	9.3	19.64	21.65
Merged-chr16-69364536-2	chr16	69364288	69364787	promoter-TSS (NM_022341)	promoter-TSS (NM_022341)	39	ENSG00000258429	PDF	peptide deformylase (mitochondrial)	8.16	16.98	26.96
Merged-chr11-19262638-2	chr11	19262389	19262888	promoter-TSS (NM_024680)	promoter-TSS (NM_024680)	131	ENSG00000129173	E2F8	E2F transcription factor 8	4.31	18.31	14.43
Merged-chr22-50689772-2	chr22	50689523	50690022	promoter-TSS (NM_032019)	promoter-TSS (NM_032019)	-62	ENSG00000100429	HDAC10	histone deacetylase 10	9.75	20.3	20.51
Merged-chr1-46598707-2	chr1	46598458	46598957	promoter-TSS (NM_001114172)	promoter-TSS (NM_001114172)	-1	ENSG00000117461	PIK3R3	"phosphoinositide-3-kinase, regulatory subunit 3 (gamma)"	12.92	26.3	30
Merged-chr19-46850287-2	chr19	46850039	46850538	promoter-TSS (NM_006247)	promoter-TSS (NM_006247)	-37	ENSG00000011485	PPP5C	"protein phosphatase 5, catalytic subunit"	7.71	17.97	20.89
Merged-chr17-46918889-2	chr17	46918641	46919140	"intron (NM_001261395, intron 1 of 11)"	"intron (NM_001261395, intron 1 of 11)"	-10540	ENSG00000136436	CALCOCO2	calcium binding and coiled-coil domain 2	4.76	10.98	11.77
Merged-chr19-44067085-2	chr19	44066836	44067335	"intron (NM_006297, intron 2 of 16)"	MIR|SINE|MIR	-12645	ENSG00000073050	XRCC1	X-ray repair complementing defective repair in Chinese hamster cells 1	9.52	23.63	25.82
Merged-chr16-87795928-2	chr16	87795679	87796178	"intron (NM_001184856, intron 1 of 10)"	"intron (NM_001184856, intron 1 of 10)"	-3670	ENSG00000104731	KLHDC4	kelch domain containing 4	3.63	30.29	16.71
Merged-chr2-27603687-2	chr2	27603439	27603938	promoter-TSS (NM_144631)	promoter-TSS (NM_144631)	77	ENSG00000163795	ZNF513	zinc finger protein 513	9.52	24.96	26.2
Merged-chr7-100808918-2	chr7	100808670	100809169	promoter-TSS (NM_003378)	promoter-TSS (NM_003378)	67	ENSG00000128564	VGF	VGF nerve growth factor inducible	11.56	27.96	26.96
Merged-chr7-121170848-2	chr7	121170600	121171099	Intergenic	Intergenic	134427	ENSG00000196937	FAM3C	"family with sequence similarity 3, member C"	2.72	14.98	11.01
Merged-chr5-134734908-2	chr5	134734659	134735158	promoter-TSS (NM_138610)	promoter-TSS (NM_138610)	-20	ENSG00000113648	H2AFY	"H2A histone family, member Y"	4.53	18.64	15.95
Merged-chrX-152599573-2	chrX	152599324	152599823	promoter-TSS (NM_001080485)	promoter-TSS (NM_001080485)	40	ENSG00000063587	ZNF275	zinc finger protein 275	4.08	18.31	12.53
Merged-chr6-42385608-2	chr6	42385359	42385858	"intron (NM_033502, intron 2 of 17)"	"intron (NM_033502, intron 2 of 17)"	-34181	ENSG00000124496	TRERF1	transcriptional regulating factor 1	4.99	11.32	14.43
Merged-chr7-5553465-2	chr7	5553216	5553715	promoter-TSS (NM_024963)	promoter-TSS (NM_024963)	66		FBXL18	F-box and leucine-rich repeat protein 18	9.98	20.64	20.51
Merged-chr3-196084975-2	chr3	196084727	196085226	"intron (NM_015562, intron 10 of 10)"	"intron (NM_015562, intron 10 of 10)"	19685	ENSG00000145107	TM4SF19	transmembrane 4 L six family member 19	2.95	12.32	12.53
Merged-chr1-109506007-2	chr1	109505758	109506257	"5' UTR (NM_001048210, exon 1 of 12)"	"5' UTR (NM_001048210, exon 1 of 12)"	-114	ENSG00000121940	CLCC1	chloride channel CLIC-like 1	11.56	25.96	33.42
Merged-chr15-33487024-2	chr15	33486775	33487274	promoter-TSS (NM_001277314)	promoter-TSS (NM_001277314)	90	ENSG00000248905	FMN1	formin 1	7.94	17.31	21.65
Merged-chr14-55518537-2	chr14	55518289	55518788	"intron (NM_144578, intron 1 of 3)"	CpG	-176	ENSG00000168175	MAPK1IP1L	mitogen-activated protein kinase 1 interacting protein 1-like	14.51	29.96	32.28
Merged-chr2-27435210-2	chr2	27434962	27435461	promoter-TSS (NM_001170795)	promoter-TSS (NM_001170795)	8	ENSG00000138085	ATRAID	all-trans retinoic acid-induced differentiation factor	10.2	24.63	22.41
Merged-chr2-85934565-2	chr2	85934317	85934816	Intergenic	Intergenic	-13152	ENSG00000115523	GNLY	granulysin	5.67	13.98	13.67
Merged-chr12-105724335-2	chr12	105724086	105724585	promoter-TSS (NM_001145199)	promoter-TSS (NM_001145199)	79	ENSG00000235162	C12orf75	chromosome 12 open reading frame 75	11.34	25.63	28.1
Merged-chr15-29286535-2	chr15	29286286	29286785	"intron (NM_001130414, intron 1 of 12)"	"intron (NM_001130414, intron 1 of 12)"	-72695	ENSG00000034053	APBA2	"amyloid beta (A4) precursor protein-binding, family A, member 2"	0.91	11.32	12.15
Merged-chr12-109029405-2	chr12	109029156	109029655	Intergenic	MER58B|DNA|hAT-Charlie	1735	ENSG00000110876	SELPLG	selectin P ligand	7.71	25.3	17.85
Merged-chr8-133993459-2	chr8	133993211	133993710	"intron (NM_003235, intron 34 of 47)"	"intron (NM_003235, intron 34 of 47)"	-65366	ENSG00000276961	MIR7848	microRNA 7848	2.72	10.32	8.35
Merged-chr16-57636198-2	chr16	57635949	57636448	Intergenic	Intergenic	17407	ENSG00000205336	ADGRG1	adhesion G protein-coupled receptor G1	7.71	19.31	15.95
Merged-chr14-91224847-2	chr14	91224599	91225098	"intron (NM_001010854, intron 3 of 19)"	CpG	-57913		TTC7B	tetratricopeptide repeat domain 7B	9.98	22.97	26.2
Merged-chr3-17784255-2	chr3	17784006	17784505	Intergenic	CpG	1856	ENSG00000131374	TBC1D5	"TBC1 domain family, member 5"	16.78	35.28	38.74
Merged-chr12-104913240-2	chr12	104912992	104913491	"intron (NM_018413, intron 1 of 2)"	"intron (NM_018413, intron 1 of 2)"	-62549	ENSG00000171310	CHST11	carbohydrate (chondroitin 4) sulfotransferase 11	3.85	12.32	11.77
Merged-chr3-101546833-2	chr3	101546584	101547083	promoter-TSS (NM_001005474)	promoter-TSS (NM_001005474)	1	ENSG00000144802	NFKBIZ	"nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta"	6.12	15.64	12.53
Merged-chr1-17240478-2	chr1	17240229	17240728	Intergenic	CpG	7967	ENSG00000058453	CROCC	"ciliary rootlet coiled-coil, rootletin"	12.47	27.63	26.2
Merged-chr15-65175495-2	chr15	65175246	65175745	Intergenic	Intergenic	28606	ENSG00000166839	ANKDD1A	ankyrin repeat and death domain containing 1A	2.72	12.98	10.25
Merged-chr15-89787125-2	chr15	89786876	89787375	promoter-TSS (NM_018193)	promoter-TSS (NM_018193)	69	ENSG00000140525	FANCI	Fanconi anemia complementation group I	9.98	25.63	23.17
Merged-chr17-3749636-2	chr17	3749388	3749887	promoter-TSS (NM_001114118)	promoter-TSS (NM_001114118)	92		NCBP3	nuclear cap binding subunit 3	13.6	27.29	40.64
Merged-chr12-52463459-2	chr12	52463211	52463710	promoter-TSS (NM_021934)	promoter-TSS (NM_021934)	298	ENSG00000123395	ATG101	autophagy related 101	10.2	21.64	22.03
Merged-chr8-125662652-2	chr8	125662403	125662902	"intron (NM_001282974, intron 3 of 13)"	"intron (NM_001282974, intron 3 of 13)"	-78096	ENSG00000170873	MTSS1	metastasis suppressor 1	2.95	11.32	12.15
Merged-chr4-89513913-2	chr4	89513665	89514164	"intron (NM_014606, intron 1 of 25)"	CpG	-340	ENSG00000138641	HERC3	HECT and RLD domain containing E3 ubiquitin protein ligase 3	1.36	7.32	6.46
Merged-chr16-23652685-2	chr16	23652436	23652935	promoter-TSS (NM_001199743)	promoter-TSS (NM_001199743)	2		DCTN5	dynactin 5 (p25)	6.58	17.97	17.47
Merged-chr15-77224020-2	chr15	77223771	77224270	promoter-TSS (NM_002902)	promoter-TSS (NM_002902)	-58		RCN2	"reticulocalbin 2, EF-hand calcium binding domain"	18.14	37.61	41.39
Merged-chr17-47295609-2	chr17	47295360	47295859	"intron (NM_001135186, intron 3 of 7)"	"intron (NM_001135186, intron 3 of 7)"	7673	ENSG00000167083	GNGT2	"guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2"	8.16	20.3	17.47
Merged-chr13-115046173-2	chr13	115045925	115046424	promoter-TSS (NM_080687)	promoter-TSS (NM_080687)	885	ENSG00000169062	UPF3A	UPF3 regulator of nonsense transcripts homolog A (yeast)	3.4	18.97	18.61
Merged-chr10-134121562-2	chr10	134121314	134121813	promoter-TSS (NM_173575)	promoter-TSS (NM_173575)	86	ENSG00000165752	STK32C	serine/threonine kinase 32C	6.8	16.31	15.95
Merged-chr21-45139048-2	chr21	45138799	45139298	promoter-TSS (NM_003681)	promoter-TSS (NM_003681)	-70	ENSG00000160209	PDXK	"pyridoxal (pyridoxine, vitamin B6) kinase"	6.58	15.98	17.09
Merged-chr6-139852456-2	chr6	139852208	139852707	Intergenic	Intergenic	56724	ENSG00000238099	LINC01625	long intergenic non-protein coding RNA 1625	3.17	10.98	13.29
Merged-chr6-157802304-2	chr6	157802055	157802554	promoter-TSS (NM_024630)	promoter-TSS (NM_024630)	253	ENSG00000175048	ZDHHC14	"zinc finger, DHHC-type containing 14"	11.56	25.3	26.96
Merged-chr8-101322349-2	chr8	101322101	101322600	promoter-TSS (NM_183419)	promoter-TSS (NM_183419)	-44	ENSG00000034677	RNF19A	"ring finger protein 19A, RBR E3 ubiquitin protein ligase"	16.78	34.28	41.39
Merged-chr19-7985518-2	chr19	7985269	7985768	promoter-TSS (NR_030717)	promoter-TSS (NR_030717)	-324	ENSG00000104976	SNAPC2	small nuclear RNA activating complex polypeptide 2	7.94	16.64	17.09
Merged-chr8-22301421-2	chr8	22301173	22301672	"intron (NM_005605, intron 1 of 13)"	"intron (NM_005605, intron 1 of 13)"	-2939	ENSG00000120910	PPP3CC	"protein phosphatase 3, catalytic subunit, gamma isozyme"	5.67	17.64	13.29
Merged-chr16-81650262-2	chr16	81650014	81650513	"intron (NM_198390, intron 2 of 20)"	"intron (NM_198390, intron 2 of 20)"	-5310	ENSG00000275109	MIR6504	microRNA 6504	4.76	21.64	15.57
Merged-chr18-47792885-2	chr18	47792637	47793136	promoter-TSS (NM_145020)	promoter-TSS (NM_145020)	21	ENSG00000172361	CFAP53	cilia and flagella associated protein 53	7.48	17.31	17.47
Merged-chr6-31325081-2	chr6	31324833	31325332	promoter-TSS (NM_005514).3	promoter-TSS (NM_005514).3	93	ENSG00000234745	HLA-B	"major histocompatibility complex, class I, B"	5.44	10.98	11.01
Merged-chr17-37914490-2	chr17	37914242	37914741	"3' UTR (NM_183230, exon 7 of 7)"	"3' UTR (NM_183230, exon 7 of 7)"	-18271	ENSG00000141738	GRB7	growth factor receptor bound protein 7	6.35	27.63	20.51
Merged-chr1-146714517-2	chr1	146714269	146714768	"intron (NM_001256338, intron 1 of 16)"	CpG	-227	ENSG00000131778	CHD1L	chromodomain helicase DNA binding protein 1-like	7.94	17.31	17.47
Merged-chr15-70012007-2	chr15	70011759	70012258	Intergenic	Intergenic	115565	ENSG00000259703	LINC00593	long intergenic non-protein coding RNA 593	7.26	17.97	15.19
Merged-chr7-26333775-2	chr7	26333527	26334026	"intron (NM_001199835, intron 1 of 6)"	"intron (NM_001199835, intron 1 of 6)"	-2261	ENSG00000086300	SNX10	sorting nexin 10	4.99	17.64	14.81
Merged-chr18-19284807-2	chr18	19284558	19285057	promoter-TSS (NM_138340)	promoter-TSS (NM_138340)	41	ENSG00000158201	ABHD3	abhydrolase domain containing 3	13.83	31.29	33.42
Merged-chr12-109125377-2	chr12	109125128	109125627	promoter-TSS (NM_014325)	promoter-TSS (NM_014325)	51	ENSG00000110880	CORO1C	"coronin, actin binding protein, 1C"	10.88	22.97	25.82
Merged-chr12-77459454-2	chr12	77459206	77459705	promoter-TSS (NM_203394)	promoter-TSS (NM_203394)	95	ENSG00000165891	E2F7	E2F transcription factor 7	7.03	20.97	26.2
Merged-chr1-161696591-2	chr1	161696342	161696841	"exon (NM_001002901, exon 7 of 8)"	"exon (NM_001002901, exon 7 of 8)"	-4148	ENSG00000162746	FCRLB	Fc receptor-like B	3.4	14.98	18.61
Merged-chr1-8086421-2	chr1	8086173	8086672	promoter-TSS (NM_018948)	promoter-TSS (NM_018948)	29	ENSG00000116285	ERRFI1	ERBB receptor feedback inhibitor 1	7.26	18.64	20.13
Merged-chr4-36288015-2	chr4	36287767	36288266	"intron (NM_001170700, intron 1 of 8)"	"intron (NM_001170700, intron 1 of 8)"	-2372	ENSG00000197057	DTHD1	death domain containing 1	9.07	22.63	22.03
Merged-chr17-27038481-2	chr17	27038233	27038732	"intron (NM_152465, intron 1 of 3)"	CpG	-390	ENSG00000167525	PROCA1	protein interacting with cyclin A1	9.98	23.3	28.48
Merged-chr10-103986015-2	chr10	103985767	103986266	promoter-TSS (NM_152310)	promoter-TSS (NM_152310)	19	ENSG00000119915	ELOVL3	ELOVL fatty acid elongase 3	10.2	22.3	20.89
Merged-chr5-10564390-2	chr5	10564141	10564640	promoter-TSS (NM_001164440)	promoter-TSS (NM_001164440)	45	ENSG00000164236	ANKRD33B	ankyrin repeat domain 33B	5.9	14.31	15.95
Merged-chr16-28834170-2	chr16	28833921	28834420	promoter-TSS (NM_017492)	promoter-TSS (NM_017492)	199	ENSG00000168488	ATXN2L	ataxin 2-like	11.56	23.3	33.04
Merged-chr14-39572463-2	chr14	39572214	39572713	promoter-TSS (NM_006364)	promoter-TSS (NM_006364)	26	ENSG00000100934	SEC23A	"Sec23 homolog A, COPII coat complex component"	5.67	16.64	16.71
Merged-chr10-80063150-2	chr10	80062901	80063400	Intergenic	CpG	-36065	ENSG00000227136	LINC00595	long intergenic non-protein coding RNA 595	25.85	53.26	55.45
Merged-chr17-25660003-2	chr17	25659754	25660253	Intergenic	CpG	-38897		WSB1	WD repeat and SOCS box containing 1	8.84	18.31	19.37
Merged-chr6-146285588-2	chr6	146285339	146285838	promoter-TSS (NM_173082)	promoter-TSS (NM_173082)	355	ENSG00000146414	SHPRH	"SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase"	9.52	21.97	22.41
Merged-chr17-78865778-2	chr17	78865530	78866029	"intron (NM_020761, intron 18 of 33)"	"intron (NM_020761, intron 18 of 33)"	86347	ENSG00000262833	LOC101928855	uncharacterized LOC101928855	5.21	29.29	21.65
Merged-chr19-45519719-2	chr19	45519470	45519969	"intron (NM_006509, intron 3 of 10)"	MER20B|DNA|hAT-Charlie	-15012	ENSG00000104856	RELB	v-rel avian reticuloendotheliosis viral oncogene homolog B	2.04	12.65	14.05
Merged-chr19-984314-2	chr19	984066	984565	promoter-TSS (NM_024100)	promoter-TSS (NM_024100)	13	ENSG00000065268	WDR18	WD repeat domain 18	8.39	21.64	20.51
Merged-chr9-132250965-2	chr9	132250717	132251216	promoter-TSS (NR_038955)	promoter-TSS (NR_038955)	-27		LINC00963	long intergenic non-protein coding RNA 963	10.88	31.95	34.56
Merged-chr1-172632021-2	chr1	172631772	172632271	"intron (NM_000639, intron 2 of 3)"	"intron (NM_000639, intron 2 of 3)"	-3836	ENSG00000117560	FASLG	"Fas ligand (TNF superfamily, member 6)"	4.76	15.98	17.85
Merged-chr14-76618526-2	chr14	76618277	76618776	"intron (NM_017926, intron 1 of 9)"	"intron (NM_017926, intron 1 of 9)"	-298	ENSG00000089916	GPATCH2L	G-patch domain containing 2 like	3.85	8.65	7.98
Merged-chr5-14664593-2	chr5	14664344	14664843	promoter-TSS (NM_138348)	promoter-TSS (NM_138348)	190	ENSG00000154124	OTULIN	OTU deubiquitinase with linear linkage specificity	11.34	42.94	41.01
Merged-chr7-44084253-2	chr7	44084005	44084504	promoter-TSS (NM_001284313)	promoter-TSS (NM_001284313)	-15	ENSG00000136279	DBNL	drebrin-like	7.94	18.31	22.03
Merged-chr4-99182419-2	chr4	99182171	99182670	promoter-TSS (NM_001100429)	promoter-TSS (NM_001100429)	107	ENSG00000138698	RAP1GDS1	"RAP1, GTP-GDP dissociation stimulator 1"	7.71	19.64	19.37
Merged-chr17-48585788-2	chr17	48585540	48586039	promoter-TSS (NM_032133)	promoter-TSS (NM_032133)	-44	ENSG00000136449	MYCBPAP	MYCBP associated protein	10.2	26.96	23.93
Merged-chr10-126300522-2	chr10	126300274	126300773	"intron (NM_022126, intron 6 of 6)"	"intron (NM_022126, intron 6 of 6)"	92074		FAM53B-AS1	FAM53B antisense RNA 1	4.76	15.31	18.61
Merged-chr8-81830984-2	chr8	81830735	81831234	Intergenic	Intergenic	43968	ENSG00000164684	ZNF704	zinc finger protein 704	3.63	11.65	12.15
Merged-chr9-19184359-2	chr9	19184111	19184610	Intergenic	Intergenic	46403		DENND4C	DENN/MADD domain containing 4C	6.58	16.31	14.43
Merged-chr7-70158901-2	chr7	70158653	70159152	"intron (NM_001127231, intron 5 of 17)"	CpG	438621	ENSG00000185274	WBSCR17	Williams-Beuren syndrome chromosome region 17	3.63	23.97	22.41
Merged-chr12-122751149-2	chr12	122750901	122751400	promoter-TSS (NM_022916)	promoter-TSS (NM_022916)	82		VPS33A	vacuolar protein sorting 33 homolog A (S. cerevisiae)	6.35	14.31	13.67
Merged-chr14-62129497-2	chr14	62129249	62129748	Intergenic	Intergenic	32621	ENSG00000100644	HIF1A	"hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)"	7.03	15.64	14.43
Merged-chr1-25392531-2	chr1	25392282	25392781	Intergenic	Intergenic	101030	ENSG00000020633	RUNX3	runt-related transcription factor 3	2.49	16.64	16.33
Merged-chr17-79885655-2	chr17	79885406	79885905	promoter-TSS (NM_002359)	promoter-TSS (NM_002359)	50	ENSG00000265688	MAFG-AS1	MAFG antisense RNA 1 (head to head)	9.3	26.3	21.65
Merged-chr19-13262695-2	chr19	13262447	13262946	"intron (NM_004907, intron 1 of 1)"	CpG	-1414	ENSG00000160888	IER2	immediate early response 2	12.7	31.29	25.44
Merged-chr5-56205697-2	chr5	56205448	56205947	"intron (NM_001171990, intron 1 of 5)"	CpG	-610	ENSG00000155542	SETD9	SET domain containing 9	11.34	23.97	27.34
Merged-chr12-121995785-2	chr12	121995536	121996035	"intron (NM_001005366, intron 4 of 22)"	"intron (NM_001005366, intron 4 of 22)"	-22579	ENSG00000089094	KDM2B	lysine (K)-specific demethylase 2B	4.99	29.29	25.82
Merged-chr5-142602706-2	chr5	142602457	142602956	"3' UTR (NM_001135608, exon 23 of 23)"	"3' UTR (NM_001135608, exon 23 of 23)"	-180548	ENSG00000113580	NR3C1	"nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)"	3.63	12.32	14.05
Merged-chr3-141515599-2	chr3	141515351	141515850	"intron (NM_139209, intron 2 of 3)"	"intron (NM_139209, intron 2 of 3)"	-18557		GRK7	G protein-coupled receptor kinase 7	5.44	16.31	17.47
Merged-chr8-146024278-2	chr8	146024029	146024528	promoter-TSS (NM_213605)	promoter-TSS (NM_213605)	-17	ENSG00000197363	ZNF517	zinc finger protein 517	8.84	18.31	22.79
Merged-chr19-2273825-2	chr19	2273576	2274075	TTS (NM_004152)	TTS (NM_004152)	-4340	ENSG00000104904	OAZ1	ornithine decarboxylase antizyme 1	4.76	17.97	21.27
Merged-chr2-61108526-2	chr2	61108278	61108777	promoter-TSS (NM_001291746)	promoter-TSS (NM_001291746)	78	ENSG00000228414	LINC01185	long intergenic non-protein coding RNA 1185	9.3	19.64	25.06
Merged-chr1-25242017-2	chr1	25241769	25242268	"intron (NM_004350, intron 3 of 4)"	L2a|LINE|L2	-3889	ENSG00000278034	MIR6731	microRNA 6731	2.72	12.65	11.01
Merged-chr16-66907351-2	chr16	66907103	66907602	Intergenic	Intergenic	7031	ENSG00000172840	PDP2	pyruvate dehyrogenase phosphatase catalytic subunit 2	9.3	27.63	24.31
Merged-chr5-156457923-2	chr5	156457675	156458174	"intron (NM_001099414, intron 8 of 8)"	"intron (NM_001099414, intron 8 of 8)"	-27563	ENSG00000113249	HAVCR1	hepatitis A virus cellular receptor 1	2.49	10.98	11.77
Merged-chr19-10908384-2	chr19	10908136	10908635	"intron (NM_001005361, intron 10 of 20)"	"intron (NM_001005361, intron 10 of 20)"	-17455	ENSG00000265879	MIR4748	microRNA 4748	6.8	20.64	20.51
Merged-chr2-201989024-2	chr2	201988775	201989274	"intron (NM_001127183, intron 1 of 9)"	"intron (NM_001127183, intron 1 of 9)"	-5755	ENSG00000003402	CFLAR	CASP8 and FADD like apoptosis regulator	3.85	14.31	11.39
Merged-chr3-28390389-2	chr3	28390141	28390640	"5' UTR (NM_001134432, exon 1 of 7)"	"5' UTR (NM_001134432, exon 1 of 7)"	-228	ENSG00000163512	AZI2	5-azacytidine induced 2	10.66	21.64	25.44
Merged-chr9-4679566-2	chr9	4679317	4679816	promoter-TSS (NM_017913)	promoter-TSS (NM_017913)	0	ENSG00000106993	CDC37L1	cell division cycle 37-like 1	11.11	24.96	27.34
Merged-chr9-111775868-2	chr9	111775620	111776119	promoter-TSS (NM_001286974)	promoter-TSS (NM_001286974)	-5	ENSG00000119326	CTNNAL1	"catenin (cadherin-associated protein), alpha-like 1"	6.8	14.98	20.13
Merged-chr12-129279446-2	chr12	129279198	129279697	"intron (NM_145648, intron 7 of 7)"	"intron (NM_145648, intron 7 of 7)"	-29094	ENSG00000139370	SLC15A4	"solute carrier family 15 (oligopeptide transporter), member 4"	1.36	11.98	12.15
Merged-chr11-67273323-2	chr11	67273075	67273574	promoter-TSS (NM_001130848)	promoter-TSS (NM_001130848)	481	ENSG00000110697	PITPNM1	"phosphatidylinositol transfer protein, membrane-associated 1"	3.4	11.32	12.15
Merged-chr20-24973443-2	chr20	24973195	24973694	promoter-TSS (NM_020531)	promoter-TSS (NM_020531)	19	ENSG00000101474	APMAP	adipocyte plasma membrane associated protein	16.78	38.94	39.5
Merged-chr19-10626815-2	chr19	10626567	10627066	"intron (NM_001166215, intron 1 of 1)"	"intron (NM_001166215, intron 1 of 1)"	-1310	ENSG00000180739	S1PR5	sphingosine-1-phosphate receptor 5	2.95	16.31	15.57
Merged-chr15-38988677-2	chr15	38988429	38988928	promoter-TSS (NM_207444)	promoter-TSS (NM_207444)	121	ENSG00000175779	C15orf53	chromosome 15 open reading frame 53	5.9	11.98	12.91
Merged-chr20-25037954-2	chr20	25037706	25038205	"intron (NM_001252677, intron 1 of 11)"	CpG	-863	ENSG00000154930	ACSS1	acyl-CoA synthetase short-chain family member 1	7.71	18.97	18.99
Merged-chr22-43485301-2	chr22	43485052	43485551	"non-coding (NR_027779, exon 1 of 12)"	"non-coding (NR_027779, exon 1 of 12)"	-133	ENSG00000100271	TTLL1	tubulin tyrosine ligase-like family member 1	11.79	26.63	25.44
Merged-chr12-10365559-2	chr12	10365311	10365810	promoter-TSS (NM_031412)	promoter-TSS (NM_031412)	-71	ENSG00000139112	GABARAPL1	GABA(A) receptor-associated protein like 1	5.44	16.64	14.81
Merged-chr14-97925271-2	chr14	97925022	97925521	"intron (NR_110166, intron 1 of 4)"	UCON31|Unknown|Unknown	-118	ENSG00000246084	LOC101929241	uncharacterized LOC101929241	8.62	19.64	22.03
Merged-chr2-25439031-2	chr2	25438783	25439282	Intergenic	CpG	-36152	ENSG00000119772	DNMT3A	DNA (cytosine-5-)-methyltransferase 3 alpha	6.58	17.64	14.81
Merged-chr6-16421357-2	chr6	16421109	16421608	"intron (NM_001128164, intron 6 of 7)"	"intron (NM_001128164, intron 6 of 7)"	-182547	ENSG00000137198	GMPR	guanosine monophosphate reductase	4.31	17.31	12.53
Merged-chr3-177076653-2	chr3	177076405	177076904	Intergenic	Intergenic	-64424	ENSG00000203645	LINC00501	long intergenic non-protein coding RNA 501	4.53	15.64	9.87
Merged-chr12-121163603-2	chr12	121163354	121163853	promoter-TSS (NM_000017)	promoter-TSS (NM_000017)	-32	ENSG00000122971	ACADS	"acyl-CoA dehydrogenase, C-2 to C-3 short chain"	9.75	22.63	22.41
Merged-chr1-25174845-2	chr1	25174596	25175095	Intergenic	CpG	-71062	ENSG00000278034	MIR6731	microRNA 6731	11.79	26.63	35.32
Merged-chr5-114880543-2	chr5	114880295	114880794	promoter-TSS (NM_020177)	promoter-TSS (NM_020177)	-47	ENSG00000145780	FEM1C	fem-1 homolog c (C. elegans)	10.88	27.96	34.18
Merged-chr15-39917181-2	chr15	39916933	39917432	"intron (NM_152597, intron 10 of 11)"	"intron (NM_152597, intron 10 of 11)"	-43902		THBS1	thrombospondin 1	3.17	17.64	22.79
Merged-chr2-152118292-2	chr2	152118044	152118543	promoter-TSS (NM_198557)	promoter-TSS (NM_198557)	-96	ENSG00000184898	RBM43	RNA binding motif protein 43	10.2	20.97	22.41
Merged-chr8-38759017-2	chr8	38758768	38759267	"intron (NM_021623, intron 1 of 12)"	CpG	-264	ENSG00000169499	PLEKHA2	"pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2"	6.35	14.65	12.91
Merged-chr5-59995942-2	chr5	59995694	59996193	promoter-TSS (NM_001145208)	promoter-TSS (NM_001145208)	-50	ENSG00000035499	DEPDC1B	DEP domain containing 1B	6.35	19.64	30
Merged-chr3-105787785-2	chr3	105787536	105788035	Intergenic	Intergenic	199898	ENSG00000114423	CBLB	"Cbl proto-oncogene B, E3 ubiquitin protein ligase"	3.85	13.98	14.43
Merged-chr3-49377596-2	chr3	49377348	49377847	promoter-TSS (NM_199443)	promoter-TSS (NM_199443)	61	ENSG00000114316	USP4	ubiquitin specific peptidase 4 (proto-oncogene)	13.15	31.62	34.18
Merged-chr16-53468936-2	chr16	53468687	53469186	"intron (NM_005611, intron 1 of 21)"	CpG	-585	ENSG00000103479	RBL2	retinoblastoma-like 2	7.26	16.31	26.58
Merged-chr20-37274979-2	chr20	37274731	37275230	"intron (NM_001164431, intron 12 of 14)"	CpG	-44403	ENSG00000124143	ARHGAP40	Rho GTPase activating protein 40	6.8	15.64	17.85
Merged-chr14-102227311-2	chr14	102227063	102227562	promoter-TSS (NM_001161726)	promoter-TSS (NM_001161726)	823	ENSG00000078304	PPP2R5C	"protein phosphatase 2, regulatory subunit B', gamma"	3.17	11.98	9.87
Merged-chr19-59025488-2	chr19	59025239	59025738	"exon (NM_032792, exon 3 of 3)"	"exon (NM_032792, exon 3 of 3)"	2056	ENSG00000083807	SLC27A5	"solute carrier family 27 (fatty acid transporter), member 5"	10.2	21.97	25.82
Merged-chr17-19281508-2	chr17	19281260	19281759	promoter-TSS (NM_139034)	promoter-TSS (NM_139034)	14	ENSG00000108641	B9D1	B9 protein domain 1	16.78	36.61	37.22
Merged-chr6-158589327-2	chr6	158589079	158589578	promoter-TSS (NM_207118)	promoter-TSS (NM_207118)	16	ENSG00000122335	SERAC1	serine active site containing 1	9.75	19.97	25.82
Merged-chr16-30825820-2	chr16	30825572	30826071	Intergenic	CpG	27298	ENSG00000102870	ZNF629	zinc finger protein 629	13.6	27.63	30.38
Merged-chr1-197872067-2	chr1	197871819	197872318	"intron (NM_001024594, intron 1 of 2)"	CpG	-386	ENSG00000203724	C1orf53	chromosome 1 open reading frame 53	5.9	17.31	17.85
Merged-chr11-60746562-2	chr11	60746313	60746812	"intron (NM_001254750, intron 1 of 10)"	"intron (NM_001254750, intron 1 of 10)"	-7449	ENSG00000013725	CD6	CD6 molecule	3.17	14.98	15.19
Merged-chr4-128982354-2	chr4	128982105	128982604	promoter-TSS (NM_032239)	promoter-TSS (NM_032239)	67	ENSG00000138709	LARP1B	"La ribonucleoprotein domain family, member 1B"	14.51	30.62	41.01
Merged-chr22-45081189-2	chr22	45080941	45081440	"intron (NM_001198721, intron 2 of 9)"	MIR3|SINE|MIR	-8502	ENSG00000186654	PRR5	proline rich 5 (renal)	0.91	2.66	2.28
Merged-chr1-1209295-2	chr1	1209047	1209546	promoter-TSS (NM_058167)	promoter-TSS (NM_058167)	62	ENSG00000160087	UBE2J2	"ubiquitin-conjugating enzyme E2, J2"	11.11	23.3	25.82
Merged-chr6-88032300-2	chr6	88032051	88032550	promoter-TSS (NM_001287445)	promoter-TSS (NM_001287445)	6	ENSG00000111850	SMIM8	small integral membrane protein 8	5.67	13.31	15.95
Merged-chr22-50364609-2	chr22	50364360	50364859	Intergenic	Intergenic	-8095	ENSG00000276753	MIR6821	microRNA 6821	9.98	26.96	22.03
Merged-chr9-129233533-2	chr9	129233285	129233784	"intron (NM_033446, intron 7 of 9)"	MIRb|SINE|MIR	60751		NRON	"non-protein coding RNA, repressor of NFAT"	4.53	19.97	15.19
Merged-chr8-21716117-2	chr8	21715868	21716367	Intergenic	Intergenic	-55088	ENSG00000147443	DOK2	docking protein 2	2.72	15.98	12.53
Merged-chr20-32251526-2	chr20	32251277	32251776	"exon (NM_080825, exon 2 of 2)"	"exon (NM_080825, exon 2 of 2)"	-1434	ENSG00000149609	C20orf144	chromosome 20 open reading frame 144	8.62	21.3	18.23
Merged-chr2-10183975-2	chr2	10183727	10184226	promoter-TSS (NM_001177718)	promoter-TSS (NM_001177718)	-20	ENSG00000172059	KLF11	Kruppel-like factor 11	2.95	10.98	10.25
Merged-chr2-28629747-2	chr2	28629499	28629998	"intron (NM_005253, intron 2 of 3)"	"intron (NM_005253, intron 2 of 3)"	12209	ENSG00000229951	FLJ31356	uncharacterized protein FLJ31356	2.95	18.64	20.13
Merged-chr17-56421913-2	chr17	56421664	56422163	TTS (NM_003168)	TTS (NM_003168)	-7350	ENSG00000265148	BZRAP1-AS1	BZRAP1 antisense RNA 1	8.16	28.96	20.89
Merged-chr9-130159258-2	chr9	130159010	130159509	promoter-TSS (NM_014580)	promoter-TSS (NM_014580)	158	ENSG00000136856	SLC2A8	"solute carrier family 2 (facilitated glucose transporter), member 8"	6.12	47.93	40.64
Merged-chr4-146654252-2	chr4	146654003	146654502	TTS (NM_001080531)	TTS (NM_001080531)	-52896	ENSG00000237136	C4orf51	chromosome 4 open reading frame 51	5.9	13.98	17.47
Merged-chr14-102286392-2	chr14	102286144	102286643	"intron (NM_001161725, intron 3 of 15)"	Charlie1a|DNA|hAT-Charlie	-10253	ENSG00000078304	PPP2R5C	"protein phosphatase 2, regulatory subunit B', gamma"	3.63	10.65	8.73
Merged-chr3-101568264-2	chr3	101568015	101568514	promoter-TSS (NM_031419)	promoter-TSS (NM_031419)	94	ENSG00000144802	NFKBIZ	"nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta"	6.8	16.31	17.85
Merged-chr9-131419018-2	chr9	131418770	131419269	"5' UTR (NM_052844, exon 1 of 9)"	"5' UTR (NM_052844, exon 1 of 9)"	-110	ENSG00000119333	WDR34	WD repeat domain 34	9.98	24.96	20.51
Merged-chr6-20403758-2	chr6	20403509	20404008	promoter-TSS (NM_001243076)	promoter-TSS (NM_001243076)	152	ENSG00000112242	E2F3	E2F transcription factor 3	4.08	20.64	24.68
Merged-chr17-36507735-2	chr17	36507486	36507985	promoter-TSS (NM_014598)	promoter-TSS (NM_014598)	272	ENSG00000274211	SOCS7	suppressor of cytokine signaling 7	9.07	22.97	19.75
Merged-chr3-129295895-2	chr3	129295646	129296145	"intron (NM_015103, intron 9 of 35)"	"intron (NM_015103, intron 9 of 35)"	-29687	ENSG00000004399	PLXND1	plexin D1	6.35	21.3	25.06
Merged-chr15-70051551-2	chr15	70051302	70051801	Intergenic	Intergenic	76022	ENSG00000259703	LINC00593	long intergenic non-protein coding RNA 593	9.3	20.3	21.27
Merged-chr12-53718708-2	chr12	53718460	53718959	Intergenic	CpG	3297	ENSG00000094914	AAAS	"achalasia, adrenocortical insufficiency, alacrimia"	7.94	21.3	19.37
Merged-chr6-57037340-2	chr6	57037092	57037591	promoter-TSS (NR_110742)	promoter-TSS (NR_110742)	-237		BAG2	BCL2-associated athanogene 2	7.71	16.98	21.65
Merged-chr20-3748783-2	chr20	3748535	3749034	promoter-TSS (NM_001039140)	promoter-TSS (NM_001039140)	-251	ENSG00000101220	C20orf27	chromosome 20 open reading frame 27	9.07	24.96	20.89
Merged-chr1-45805650-2	chr1	45805401	45805900	promoter-TSS (NM_001048174)	promoter-TSS (NM_001048174)	21	ENSG00000132781	MUTYH	mutY DNA glycosylase	10.88	22.3	25.06
Merged-chr9-131710033-2	chr9	131709785	131710284	promoter-TSS (NM_014908)	promoter-TSS (NM_014908)	22	ENSG00000175283	DOLK	dolichol kinase	13.6	28.63	31.14
Merged-chr9-115142217-2	chr9	115141968	115142467	promoter-TSS (NR_036651)	promoter-TSS (NR_036651)	-28	ENSG00000119471	HSDL2	hydroxysteroid dehydrogenase like 2	11.79	25.63	30.38
Merged-chr7-150102386-2	chr7	150102138	150102637	promoter-TSS (NR_027237)	promoter-TSS (NR_027237)	453		LOC728743	zinc finger protein pseudogene	6.58	15.98	26.2
Merged-chr1-27114160-2	chr1	27113911	27114410	promoter-TSS (NM_017837)	promoter-TSS (NM_017837)	294	ENSG00000060642	PIGV	phosphatidylinositol glycan anchor biosynthesis class V	7.03	20.97	23.17
Merged-chr1-213031494-2	chr1	213031245	213031744	promoter-TSS (NM_014053)	promoter-TSS (NM_014053)	14	ENSG00000198468	FLVCR1-AS1	FLVCR1 antisense RNA 1 (head to head)	12.47	24.96	25.44
Merged-chr17-42287871-2	chr17	42287623	42288122	"intron (NR_045058, intron 13 of 20)"	CpG	2665	ENSG00000275107	MIR6782	microRNA 6782	8.84	24.96	22.03
Merged-chr7-139762790-2	chr7	139762541	139763040	"5' UTR (NM_022750, exon 1 of 12)"	"5' UTR (NM_022750, exon 1 of 12)"	-731	ENSG00000059378	PARP12	poly(ADP-ribose) polymerase family member 12	8.39	20.97	23.17
Merged-chr10-126490341-2	chr10	126490092	126490591	promoter-TSS (NM_032182)	promoter-TSS (NM_032182)	13	ENSG00000165660	FAM175B	"family with sequence similarity 175, member B"	7.03	17.97	18.61
Merged-chr21-40555632-2	chr21	40555383	40555882	promoter-TSS (NM_003720)	promoter-TSS (NM_003720)	192	ENSG00000183527	PSMG1	"proteasome (prosome, macropain) assembly chaperone 1"	11.11	22.3	29.62
Merged-chr3-49757091-2	chr3	49756843	49757342	"5' UTR (NM_198722, exon 1 of 1)"	"5' UTR (NM_198722, exon 1 of 1)"	-146	ENSG00000176020	AMIGO3	adhesion molecule with Ig-like domain 3	10.43	24.3	26.2
Merged-chr10-6534267-2	chr10	6534019	6534518	"intron (NM_001282644, intron 7 of 17)"	"intron (NM_001282644, intron 7 of 17)"	-87995	ENSG00000065675	PRKCQ	"protein kinase C, theta"	5.21	16.64	15.95
Merged-chr8-25203091-2	chr8	25202842	25203341	TTS (NR_106936)	TTS (NR_106936)	-173	ENSG00000274988	MIR6876	microRNA 6876	3.85	14.31	10.63
Merged-chr3-160939036-2	chr3	160938788	160939287	promoter-TSS (NM_015938)	promoter-TSS (NM_015938)	62	ENSG00000169251	NMD3	NMD3 ribosome export adaptor	7.48	15.64	17.85
Merged-chr1-224811781-2	chr1	224811533	224812032	"intron (NM_152495, intron 1 of 5)"	"intron (NM_152495, intron 1 of 5)"	-7603	ENSG00000143786	CNIH3	cornichon family AMPA receptor auxiliary protein 3	4.53	20.64	15.95
Merged-chr9-124116154-2	chr9	124115905	124116404	"intron (NR_073037, intron 4 of 7)"	L2c|LINE|L2	-16428	ENSG00000148175	STOM	stomatin	5.9	19.97	19.37
Merged-chr9-130922538-2	chr9	130922290	130922789	promoter-TSS (NM_024112)	promoter-TSS (NM_024112)	0	ENSG00000171159	C9orf16	chromosome 9 open reading frame 16	11.34	25.63	24.31
Merged-chr13-25192833-2	chr13	25192584	25193083	Intergenic	Intergenic	-38487		TPTE2P6	transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 6	8.39	21.3	18.99
Merged-chr16-57626727-2	chr16	57626478	57626977	Intergenic	L2b|LINE|L2	26878	ENSG00000205336	ADGRG1	adhesion G protein-coupled receptor G1	5.21	17.64	21.65
Merged-chr9-129568203-2	chr9	129567955	129568454	"intron (NM_001135776, intron 1 of 1)"	"intron (NM_001135776, intron 1 of 1)"	-919	ENSG00000169155	ZBTB43	zinc finger and BTB domain containing 43	5.21	16.98	15.95
Merged-chr3-5229204-2	chr3	5228955	5229454	promoter-TSS (NM_014674)	promoter-TSS (NM_014674)	155	ENSG00000134109	EDEM1	"ER degradation enhancer, mannosidase alpha-like 1"	12.02	34.95	40.26
Merged-chr17-26698568-2	chr17	26698319	26698818	promoter-TSS (NM_015077)	promoter-TSS (NM_015077)	115	ENSG00000004139	SARM1	sterile alpha and TIR motif containing 1	6.12	13.98	18.23
Merged-chr19-40972240-2	chr19	40971991	40972490	promoter-TSS (NM_000713)	promoter-TSS (NM_000713)	515	ENSG00000090013	BLVRB	biliverdin reductase B	9.3	32.62	26.58
Merged-chr19-51897646-2	chr19	51897398	51897897	Intergenic	CpG	3819	ENSG00000262874	C19orf84	chromosome 19 open reading frame 84	15.64	39.61	33.8
Merged-chr19-44037838-2	chr19	44037589	44038088	"intron (NM_174945, intron 1 of 3)"	CpG	-498		ZNF575	zinc finger protein 575	3.17	7.32	11.39
Merged-chr5-176544006-2	chr5	176543758	176544257	Intergenic	CpG	16073	ENSG00000165671	NSD1	nuclear receptor binding SET domain protein 1	7.26	17.31	17.85
Merged-chr18-9136668-2	chr18	9136419	9136918	promoter-TSS (NM_001204056)	promoter-TSS (NM_001204056)	-50	ENSG00000266053	NDUFV2-AS1	NDUFV2 antisense RNA 1	30.16	61.24	61.52
Merged-chr6-42325532-2	chr6	42325283	42325782	"intron (NM_033502, intron 3 of 17)"	"intron (NM_033502, intron 3 of 17)"	-94257	ENSG00000124496	TRERF1	transcriptional regulating factor 1	2.27	10.32	10.63
Merged-chr12-46385844-2	chr12	46385596	46386095	Intergenic	CpG	1444	ENSG00000139218	SCAF11	SR-related CTD-associated factor 11	8.62	21.64	26.96
Merged-chr12-96793870-2	chr12	96793621	96794120	"5' UTR (NM_001170464, exon 1 of 16)"	"5' UTR (NM_001170464, exon 1 of 16)"	-496	ENSG00000059758	CDK17	cyclin-dependent kinase 17	3.63	11.65	12.91
Merged-chr17-75884204-2	chr17	75883956	75884455	Intergenic	CpG	4036	ENSG00000204283	FLJ45079	FLJ45079 protein	6.8	15.98	15.57
Merged-chr21-36180033-2	chr21	36179785	36180284	"intron (NM_001754, intron 7 of 8)"	"intron (NM_001754, intron 7 of 8)"	-61912	ENSG00000234380	LINC01426	long intergenic non-protein coding RNA 1426	5.21	11.98	14.05
Merged-chr12-113796342-2	chr12	113796094	113796593	promoter-TSS (NM_173542)	promoter-TSS (NM_173542)	28	ENSG00000151176	PLBD2	phospholipase B domain containing 2	11.34	22.97	28.1
Merged-chr1-90460638-2	chr1	90460389	90460888	promoter-TSS (NR_002830)	promoter-TSS (NR_002830)	40	ENSG00000162664	ZNF326	zinc finger protein 326	12.02	26.96	25.44
Merged-chr14-50469406-2	chr14	50469157	50469656	"intron (NM_001012706, intron 1 of 3)"	"intron (NM_001012706, intron 1 of 3)"	-4832	ENSG00000214900	LINC01588	long intergenic non-protein coding RNA 1588	4.31	12.32	11.01
Merged-chr22-50639339-2	chr22	50639090	50639589	promoter-TSS (NM_031454)	promoter-TSS (NM_031454)	69	ENSG00000073169	SELO	selenoprotein O	12.47	32.29	32.66
Merged-chr11-12695871-2	chr11	12695622	12696121	promoter-TSS (NM_021961)	promoter-TSS (NM_021961)	98	ENSG00000187079	TEAD1	TEA domain family member 1 (SV40 transcriptional enhancer factor)	5.21	11.32	13.67
Merged-chr10-93558118-2	chr10	93557870	93558369	promoter-TSS (NM_025235)	promoter-TSS (NM_025235)	32	ENSG00000107854	TNKS2	"tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2"	12.7	25.96	28.86
Merged-chr3-47823516-2	chr3	47823267	47823766	promoter-TSS (NM_003074)	promoter-TSS (NM_003074)	111	ENSG00000173473	SMARCC1	"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1"	14.96	33.29	39.88
Merged-chr9-140317751-2	chr9	140317503	140318002	promoter-TSS (NM_017820)	promoter-TSS (NM_017820)	38	ENSG00000187609	EXD3	exonuclease 3'-5' domain containing 3	6.35	15.98	17.47
Merged-chrX-30671383-2	chrX	30671134	30671633	promoter-TSS (NM_203391)	promoter-TSS (NM_203391)	93	ENSG00000198814	GK	glycerol kinase	4.76	17.97	14.05
Merged-chr9-36152015-2	chr9	36151766	36152265	"intron (NM_001287013, intron 4 of 4)"	"intron (NM_001287013, intron 4 of 4)"	-15233	ENSG00000122694	GLIPR2	GLI pathogenesis-related 2	8.84	21.64	23.17
Merged-chrX-71458950-2	chrX	71458702	71459201	promoter-TSS (NM_017669)	promoter-TSS (NM_017669)	93	ENSG00000186871	ERCC6L	excision repair cross-complementation group 6-like	5.9	12.65	15.95
Merged-chr11-19138640-2	chr11	19138391	19138890	promoter-TSS (NM_019028)	promoter-TSS (NM_019028)	52	ENSG00000177054	ZDHHC13	"zinc finger, DHHC-type containing 13"	9.75	24.3	25.06
Merged-chr16-85089244-2	chr16	85088995	85089494	"intron (NM_001286566, intron 1 of 11)"	L3|LINE|CR1	7574	ENSG00000135709	KIAA0513	KIAA0513	8.84	23.97	23.17
Merged-chr12-29256572-2	chr12	29256324	29256823	Intergenic	L2c|LINE|L2	45363	ENSG00000064763	FAR2	fatty acyl-CoA reductase 2	4.31	8.99	9.11
Merged-chr9-98638055-2	chr9	98637806	98638305	"non-coding (NR_023389, exon 1 of 3)"	"non-coding (NR_023389, exon 1 of 3)"	-155	ENSG00000182150	ERCC6L2	excision repair cross-complementation group 6-like 2	8.39	18.64	18.99
Merged-chr2-43367268-2	chr2	43367020	43367519	Intergenic	MIRb|SINE|MIR	-86476	ENSG00000152518	ZFP36L2	ZFP36 ring finger protein-like 2	6.35	17.97	15.19
Merged-chr16-23494267-2	chr16	23494018	23494517	"exon (NM_015044, exon 9 of 17)"	"exon (NM_015044, exon 9 of 17)"	-27548	ENSG00000103365	GGA2	"golgi-associated, gamma adaptin ear containing, ARF binding protein 2"	3.63	24.3	21.65
Merged-chr12-133395297-2	chr12	133395049	133395548	"intron (NM_005895, intron 2 of 23)"	"intron (NM_005895, intron 2 of 23)"	-9990	ENSG00000090615	GOLGA3	golgin A3	2.95	9.99	11.01
Merged-chr5-96271194-2	chr5	96270945	96271444	promoter-TSS (NM_005575)	promoter-TSS (NM_005575)	152	ENSG00000113441	LNPEP	leucyl/cystinyl aminopeptidase	10.88	22.97	22.41
Merged-chr8-38240180-2	chr8	38239932	38240431	promoter-TSS (NM_017778)	promoter-TSS (NM_017778)	391	ENSG00000147548	WHSC1L1	Wolf-Hirschhorn syndrome candidate 1-like 1	4.08	11.98	10.25
Merged-chr19-41833981-2	chr19	41833732	41834231	Intergenic	Intergenic	-17887	ENSG00000142039	CCDC97	coiled-coil domain containing 97	18.82	43.6	42.53
Merged-chr2-201374859-2	chr2	201374611	201375110	promoter-TSS (NM_152387)	promoter-TSS (NM_152387)	68	ENSG00000155729	KCTD18	potassium channel tetramerization domain containing 18	8.39	16.98	23.17
Merged-chr2-222437159-2	chr2	222436910	222437409	promoter-TSS (NM_004438)	promoter-TSS (NM_004438)	149	ENSG00000116106	EPHA4	EPH receptor A4	5.21	16.64	15.95
Merged-chr4-40675160-2	chr4	40674911	40675410	Intergenic	Intergenic	43277	ENSG00000163694	RBM47	RNA binding motif protein 47	2.95	15.31	14.43
Merged-chr2-87018307-2	chr2	87018058	87018557	"5' UTR (NM_001768, exon 1 of 6)"	"5' UTR (NM_001768, exon 1 of 6)"	-530	ENSG00000153563	CD8A	CD8a molecule	7.03	17.97	16.33
Merged-chr1-246729683-2	chr1	246729435	246729934	promoter-TSS (NM_152609)	promoter-TSS (NM_152609)	-45	ENSG00000162852	CNST	"consortin, connexin sorting protein"	13.15	30.29	29.24
Merged-chr17-26972254-2	chr17	26972005	26972504	promoter-TSS (NM_014680)	promoter-TSS (NM_014680)	77	ENSG00000007202	KIAA0100	KIAA0100	17.46	37.95	39.12
Merged-chr8-63951425-2	chr8	63951177	63951676	"5' UTR (NM_003878, exon 1 of 9)"	"5' UTR (NM_003878, exon 1 of 9)"	-184	ENSG00000137563	GGH	"gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)"	9.98	21.97	21.27
Merged-chr19-54714929-2	chr19	54714680	54715179	Intergenic	Intergenic	-10203	ENSG00000170889	RPS9	ribosomal protein S9	9.3	29.62	18.61
Merged-chr2-37027706-2	chr2	37027458	37027957	"intron (NM_001177971, intron 10 of 13)"	"intron (NM_001177971, intron 10 of 13)"	-103874	ENSG00000205221	VIT	vitrin	2.95	21.3	15.57
Merged-chr4-78741128-2	chr4	78740879	78741378	promoter-TSS (NM_144571)	promoter-TSS (NM_144571)	584	ENSG00000138767	CNOT6L	CCR4-NOT transcription complex subunit 6-like	3.85	9.65	11.01
Merged-chr1-78148882-2	chr1	78148633	78149132	promoter-TSS (NM_015534)	promoter-TSS (NM_015534)	539	ENSG00000036549	ZZZ3	"zinc finger, ZZ-type containing 3"	9.07	19.64	18.23
Merged-chr7-35769100-2	chr7	35768851	35769350	Intergenic	Intergenic	-13053	ENSG00000227544	LOC100506725	uncharacterized LOC100506725	2.49	13.98	12.91
Merged-chr17-27945144-2	chr17	27944896	27945395	"intron (NM_032854, intron 4 of 9)"	CpG-10388	-3296	ENSG00000167549	CORO6	coronin 6	8.39	21.3	24.68
Merged-chr8-56756760-2	chr8	56756511	56757010	Intergenic	MIRc|SINE|MIR	35626		LYN	"LYN proto-oncogene, Src family tyrosine kinase"	2.72	14.98	14.43
Merged-chr3-47866471-2	chr3	47866223	47866722	"intron (NM_014966, intron 5 of 22)"	"intron (NM_014966, intron 5 of 22)"	-22073	ENSG00000132153	DHX30	DEAH (Asp-Glu-Ala-His) box helicase 30	7.94	17.31	21.65
Merged-chr16-81556247-2	chr16	81555998	81556497	"intron (NM_030629, intron 1 of 20)"	"intron (NM_030629, intron 1 of 20)"	11260	ENSG00000277255	MIR7854	microRNA 7854	3.17	17.64	14.43
Merged-chr16-89940292-2	chr16	89940043	89940542	"intron (NM_014972, intron 1 of 17)"	CpG	-298	ENSG00000141002	TCF25	transcription factor 25 (basic helix-loop-helix)	9.75	20.64	26.58
Merged-chr15-49338691-2	chr15	49338442	49338941	promoter-TSS (NM_014701)	promoter-TSS (NM_014701)	-69	ENSG00000138593	SECISBP2L	SECIS binding protein 2-like	8.62	17.97	22.03
Merged-chr7-8165680-2	chr7	8165431	8165930	"intron (NM_001276478, intron 13 of 13)"	"intron (NM_001276478, intron 13 of 13)"	-136002	ENSG00000003147	ICA1	islet cell autoantigen 1	7.71	23.97	18.61
Merged-chr4-40311556-2	chr4	40311308	40311807	"intron (NR_121641, intron 2 of 3)"	"intron (NR_121641, intron 2 of 3)"	-2355	ENSG00000249241	LOC101060498	uncharacterized LOC101060498	9.07	20.3	19.75
Merged-chr10-76994065-2	chr10	76993816	76994315	"intron (NM_144589, intron 6 of 6)"	CpG	-1705	ENSG00000165644	COMTD1	catechol-O-methyltransferase domain containing 1	9.07	19.97	26.58
Merged-chr6-161664491-2	chr6	161664242	161664741	"intron (NM_020133, intron 1 of 8)"	"intron (NM_020133, intron 1 of 8)"	-30616	ENSG00000026652	AGPAT4	1-acylglycerol-3-phosphate O-acyltransferase 4	2.95	19.64	17.47
Merged-chr19-41076722-2	chr19	41076473	41076972	"intron (NM_020971, intron 33 of 35)"	"intron (NM_020971, intron 33 of 35)"	6035	ENSG00000160410	SHKBP1	SH3KBP1 binding protein 1	10.2	24.63	23.93
Merged-chr3-160167662-2	chr3	160167414	160167913	promoter-TSS (NM_173084)	promoter-TSS (NM_173084)	37	ENSG00000213186	TRIM59	tripartite motif containing 59	16.78	39.94	40.26
Merged-chr17-21187846-2	chr17	21187597	21188096	promoter-TSS (NM_145109)	promoter-TSS (NM_145109)	122	ENSG00000034152	MAP2K3	mitogen-activated protein kinase kinase 3	14.96	33.62	38.74
Merged-chr11-89956267-2	chr11	89956019	89956518	"5' UTR (NM_012124, exon 1 of 11)"	"5' UTR (NM_012124, exon 1 of 11)"	-264		CHORDC1	cysteine and histidine rich domain containing 1	7.48	21.97	19.37
Merged-chr6-31628567-2	chr6	31628318	31628817	promoter-TSS (NM_021184).2	promoter-TSS (NM_021184).2	18	ENSG00000204439	C6orf47	chromosome 6 open reading frame 47	6.8	15.31	14.05
Merged-chr9-102584088-2	chr9	102583839	102584338	promoter-TSS (NM_173200)	promoter-TSS (NM_173200)	49	ENSG00000119508	NR4A3	"nuclear receptor subfamily 4, group A, member 3"	12.47	32.29	30.76
Merged-chr1-1840705-2	chr1	1840457	1840956	Intergenic	(CGGGG)n|Simple_repeat|Simple_repeat	5560	ENSG00000169885	CALML6	calmodulin-like 6	11.79	26.96	37.98
Merged-chr16-3508000-2	chr16	3507752	3508251	promoter-TSS (NM_001083600)	promoter-TSS (NM_001083600)	-9	ENSG00000122390	NAA60	"N(alpha)-acetyltransferase 60, NatF catalytic subunit"	8.16	18.97	25.06
Merged-chr2-240197006-2	chr2	240196758	240197257	"intron (NM_006037, intron 2 of 26)"	"intron (NM_006037, intron 2 of 26)"	30150	ENSG00000265215	MIR4269	microRNA 4269	8.39	25.63	27.34
Merged-chr5-137795180-2	chr5	137794932	137795431	Intergenic	Intergenic	6000	ENSG00000120738	EGR1	early growth response 1	6.58	22.97	18.23
Merged-chrX-54666215-2	chrX	54665966	54666465	Intergenic	CpG	-109571		GNL3L	guanine nucleotide binding protein-like 3 (nucleolar)-like	6.58	15.31	14.05
Merged-chr13-113830805-2	chr13	113830556	113831055	Intergenic	AluJo|SINE|Alu	-17837	ENSG00000126231	PROZ	"protein Z, vitamin K-dependent plasma glycoprotein"	4.08	12.32	9.49
Merged-chr17-80674539-2	chr17	80674291	80674790	promoter-TSS (NR_046408)	promoter-TSS (NR_046408)	42	ENSG00000141560	FN3KRP	fructosamine 3 kinase related protein	11.11	27.63	25.82
Merged-chr10-99629387-2	chr10	99629138	99629637	"3' UTR (NM_001010917, exon 5 of 5)"	"3' UTR (NM_001010917, exon 5 of 5)"	-19392	ENSG00000155265	GOLGA7B	"golgin A7 family, member B"	7.48	18.31	18.99
Merged-chr5-180231270-2	chr5	180231021	180231520	promoter-TSS (NM_001114620)	promoter-TSS (NM_001114620)	368	ENSG00000131446	MGAT1	"mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase"	3.4	6.99	9.11
Merged-chr16-50300417-2	chr16	50300168	50300667	promoter-TSS (NM_001286057)	promoter-TSS (NM_001286057)	34	ENSG00000121281	ADCY7	adenylate cyclase 7	7.71	18.31	20.13
Merged-chr19-39900574-2	chr19	39900326	39900825	promoter-TSS (NR_039755)	promoter-TSS (NR_039755)	257	ENSG00000266559	MIR4530	microRNA 4530	6.35	20.64	15.19
Merged-chr11-3876310-2	chr11	3876062	3876561	promoter-TSS (NM_003156)	promoter-TSS (NM_003156)	622	ENSG00000167323	STIM1	stromal interaction molecule 1	13.6	27.29	32.28
Merged-chr11-13484824-2	chr11	13484575	13485074	promoter-TSS (NM_001297741)	promoter-TSS (NM_001297741)	-20	ENSG00000148925	BTBD10	BTB (POZ) domain containing 10	13.83	28.96	29.62
Merged-chr2-242702472-2	chr2	242702223	242702722	"intron (NR_109778, intron 7 of 7)"	"intron (NR_109778, intron 7 of 7)"	13768	ENSG00000154252	GAL3ST2	galactose-3-O-sulfotransferase 2	4.31	22.97	21.27
Merged-chr19-51876123-2	chr19	51875875	51876374	promoter-TSS (NM_005601)	promoter-TSS (NM_005601)	164	ENSG00000105374	NKG7	natural killer cell granule protein 7	4.76	19.97	19.75
Merged-chr11-77899783-2	chr11	77899534	77900033	promoter-TSS (NM_020798)	promoter-TSS (NM_020798)	75	ENSG00000118369	USP35	ubiquitin specific peptidase 35	10.88	28.96	33.42
Merged-chrX-45666258-2	chrX	45666009	45666508	Intergenic	Intergenic	-44662	ENSG00000231566	LOC401585	uncharacterized LOC401585	3.85	10.65	8.73
Merged-chr17-35306178-2	chr17	35305930	35306429	promoter-TSS (NM_012138)	promoter-TSS (NM_012138)	-4	ENSG00000275700	AATF	apoptosis antagonizing transcription factor	17.69	36.61	37.6
Merged-chr3-43519226-2	chr3	43518977	43519476	"intron (NM_018075, intron 11 of 12)"	"intron (NM_018075, intron 11 of 12)"	125772		SNRK-AS1	SNRK antisense RNA 1	7.94	18.31	17.85
Merged-chr19-1855521-2	chr19	1855273	1855772	"intron (NM_031918, intron 1 of 1)"	"intron (NM_031918, intron 1 of 1)"	7070	ENSG00000079313	REXO1	"REX1, RNA exonuclease 1 homolog"	7.03	16.98	17.09
Merged-chr18-20811450-2	chr18	20811201	20811700	"intron (NR_023359, intron 4 of 6)"	"intron (NR_023359, intron 4 of 6)"	-75661	ENSG00000134508	CABLES1	Cdk5 and Abl enzyme substrate 1	5.21	15.31	20.51
Merged-chr22-41809629-2	chr22	41809380	41809879	Intergenic	CpG	-31696	ENSG00000167074	TEF	thyrotrophic embryonic factor	6.58	16.98	20.13
Merged-chr1-113162374-2	chr1	113162125	113162624	promoter-TSS (NM_017744)	promoter-TSS (NM_017744)	-299	ENSG00000116489	CAPZA1	"capping protein (actin filament) muscle Z-line, alpha 1"	13.6	29.96	29.24
Merged-chr5-90576453-2	chr5	90576205	90576704	Intergenic	CpG	-33765	ENSG00000248323	LUCAT1	lung cancer associated transcript 1 (non-protein coding)	7.26	16.31	18.99
Merged-chr10-124713864-2	chr10	124713615	124714114	promoter-TSS (NM_024942)	promoter-TSS (NM_024942)	-55	ENSG00000119965	C10orf88	chromosome 10 open reading frame 88	18.59	39.61	37.98
Merged-chr22-29168666-2	chr22	29168418	29168917	promoter-TSS (NM_001284265)	promoter-TSS (NM_001284265)	-5	ENSG00000159873	CCDC117	coiled-coil domain containing 117	7.48	16.31	20.51
Merged-chr16-87887548-2	chr16	87887299	87887798	"intron (NM_003486, intron 1 of 9)"	"intron (NM_003486, intron 1 of 9)"	-15552	ENSG00000103257	SLC7A5	"solute carrier family 7 (amino acid transporter light chain, L system), member 5"	6.12	38.28	21.27
Merged-chr20-61554020-2	chr20	61553772	61554271	"intron (NM_022105, intron 1 of 5)"	"intron (NM_022105, intron 1 of 5)"	-3882	ENSG00000101191	DIDO1	death inducer-obliterator 1	3.17	10.98	13.29
Merged-chr9-37785028-2	chr9	37784779	37785278	promoter-TSS (NM_016042)	promoter-TSS (NM_016042)	-61	ENSG00000107371	EXOSC3	exosome component 3	7.71	24.3	19.37
Merged-chr21-46648258-2	chr21	46648009	46648508	Intergenic	MER63C|DNA|hAT-Blackjack	-59553	ENSG00000186866	POFUT2	protein O-fucosyltransferase 2	6.8	34.62	22.79
Merged-chr12-32112408-2	chr12	32112159	32112658	promoter-TSS (NM_018169)	promoter-TSS (NM_018169)	-55	ENSG00000174718	KIAA1551	KIAA1551	11.11	22.63	24.68
Merged-chr4-964346-2	chr4	964097	964596	"intron (NM_001347, intron 2 of 22)"	L1MD1|LINE|L1	-3002	ENSG00000145214	DGKQ	diacylglycerol kinase theta	4.53	21.64	25.82
Merged-chr19-4109156-2	chr19	4108907	4109406	"intron (NM_030662, intron 3 of 10)"	"intron (NM_030662, intron 3 of 10)"	-14970	ENSG00000126934	MAP2K2	mitogen-activated protein kinase kinase 2	10.2	33.29	26.96
Merged-chr22-36784204-2	chr22	36783955	36784454	promoter-TSS (NM_002473)	promoter-TSS (NM_002473)	141	ENSG00000100345	MYH9	"myosin, heavy chain 9, non-muscle"	21.54	45.27	54.69
Merged-chr19-39415240-2	chr19	39414991	39415490	"intron (NM_017827, intron 2 of 15)"	MIR|SINE|MIR	6108	ENSG00000128626	MRPS12	mitochondrial ribosomal protein S12	3.17	16.64	14.05
Merged-chr16-23516246-2	chr16	23515997	23516496	"intron (NM_015044, intron 1 of 16)"	"intron (NM_015044, intron 1 of 16)"	-5569	ENSG00000103365	GGA2	"golgi-associated, gamma adaptin ear containing, ARF binding protein 2"	2.72	19.31	14.81
Merged-chr1-184809853-2	chr1	184809605	184810104	"intron (NM_052966, intron 5 of 13)"	L3|LINE|CR1	85813	ENSG00000116406	EDEM3	"ER degradation enhancer, mannosidase alpha-like 3"	2.49	14.31	12.53
Merged-chr21-18985276-2	chr21	18985027	18985526	promoter-TSS (NM_006806)	promoter-TSS (NM_006806)	8	ENSG00000154640	BTG3	"BTG family, member 3"	8.84	18.64	32.66
Merged-chr1-153631133-2	chr1	153630885	153631384	promoter-TSS (NM_012437)	promoter-TSS (NM_012437)	-4	ENSG00000143553	SNAPIN	SNAP-associated protein	7.48	18.97	19.75
Merged-chr16-27242194-2	chr16	27241946	27242445	"intron (NM_145080, intron 5 of 7)"	"intron (NM_145080, intron 5 of 7)"	-26899	ENSG00000155666	KDM8	lysine (K)-specific demethylase 8	9.98	20.3	27.34
Merged-chr15-81293317-2	chr15	81293069	81293568	promoter-TSS (NM_022566)	promoter-TSS (NM_022566)	-23		MESDC1	mesoderm development candidate 1	13.6	27.96	31.52
Merged-chr16-1021027-2	chr16	1020779	1021278	promoter-TSS (NM_022773)	promoter-TSS (NM_022773)	44	ENSG00000103227	LMF1	lipase maturation factor 1	19.27	39.28	44.05
Merged-chr14-55804584-2	chr14	55804336	55804835	"intron (NM_152231, intron 1 of 1)"	"intron (NM_152231, intron 1 of 1)"	-65713	ENSG00000178974	FBXO34	F-box protein 34	5.9	19.31	16.71
Merged-chr7-36903892-2	chr7	36903643	36904142	"intron (NR_038120, intron 4 of 5)"	"intron (NR_038120, intron 4 of 5)"	-55145	ENSG00000221325	MIR1200	microRNA 1200	2.72	20.64	12.91
Merged-chr2-241564696-2	chr2	241564448	241564947	promoter-TSS (NM_005301)	promoter-TSS (NM_005301)	-35		GPR35	G protein-coupled receptor 35	7.03	22.63	20.13
Merged-chr3-196359379-2	chr3	196359131	196359630	Intergenic	CpG	7276	ENSG00000174004	NRROS	negative regulator of reactive oxygen species	15.42	32.29	34.18
Merged-chr17-79670247-2	chr17	79669999	79670498	promoter-TSS (NM_002949)	promoter-TSS (NM_002949)	152	ENSG00000262814	MRPL12	mitochondrial ribosomal protein L12	16.32	36.61	35.32
Merged-chr19-2085459-2	chr19	2085211	2085710	"intron (NM_130807, intron 1 of 4)"	"intron (NM_130807, intron 1 of 4)"	-10809	ENSG00000172081	MOB3A	MOB kinase activator 3A	10.43	21.3	20.89
Merged-chr1-92414376-2	chr1	92414127	92414626	promoter-TSS (NM_001242805)	promoter-TSS (NM_001242805)	552	ENSG00000137948	BRDT	"bromodomain, testis-specific"	3.63	15.98	15.95
Merged-chr15-42120249-2	chr15	42120001	42120500	promoter-TSS (NM_001198588)	promoter-TSS (NM_001198588)	33	ENSG00000168970	JMJD7-PLA2G4B	JMJD7-PLA2G4B readthrough	7.26	14.98	18.23
Merged-chr18-47340264-2	chr18	47340015	47340514	promoter-TSS (NR_117096)	promoter-TSS (NR_117096)	13		ACAA2	acetyl-CoA acyltransferase 2	4.31	12.32	12.91
Merged-chr17-7297966-2	chr17	7297718	7298217	"5' UTR (NM_001201576, exon 1 of 8)"	"5' UTR (NM_001201576, exon 1 of 8)"	-195	ENSG00000187838	PLSCR3	phospholipid scramblase 3	8.84	20.97	20.13
Merged-chr6-3064096-2	chr6	3063847	3064346	Intergenic	CpG	12962	ENSG00000137275	RIPK1	receptor (TNFRSF)-interacting serine-threonine kinase 1	6.8	15.98	17.85
Merged-chr1-117047217-2	chr1	117046968	117047467	Intergenic	Intergenic	-66498	ENSG00000116815	CD58	CD58 molecule	9.98	20.97	22.79
Merged-chr12-42538728-2	chr12	42538480	42538979	promoter-TSS (NM_173601)	promoter-TSS (NM_173601)	56	ENSG00000151233	GXYLT1	glucoside xylosyltransferase 1	8.39	20.64	22.79
Merged-chr19-17190906-2	chr19	17190658	17191157	"intron (NM_001130065, intron 1 of 39)"	"intron (NM_001130065, intron 1 of 39)"	-4316	ENSG00000099331	MYO9B	myosin IXB	3.17	15.98	16.33
Merged-chr17-28443809-2	chr17	28443560	28444059	promoter-TSS (NM_001261467)	promoter-TSS (NM_001261467)	16	ENSG00000126653	NSRP1	nuclear speckle splicing regulatory protein 1	8.16	16.64	18.61
Merged-chr8-131255304-2	chr8	131255056	131255555	"intron (NM_018482, intron 3 of 29)"	"intron (NM_018482, intron 3 of 29)"	-53474		ASAP1-IT1	ASAP1 intronic transcript 1	1.59	13.65	11.77
Merged-chr10-72142463-2	chr10	72142215	72142714	promoter-TSS (NR_103468)	promoter-TSS (NR_103468)	58	ENSG00000172731	LRRC20	leucine rich repeat containing 20	6.35	15.31	13.29
Merged-chr3-66551589-2	chr3	66551340	66551839	promoter-TSS (NM_015541)	promoter-TSS (NM_015541)	744	ENSG00000144749	LRIG1	leucine-rich repeats and immunoglobulin-like domains 1	12.92	45.6	40.64
Merged-chr18-20513536-2	chr18	20513288	20513787	promoter-TSS (NM_203292)	promoter-TSS (NM_203292)	-225	ENSG00000264817	MIR4741	microRNA 4741	4.99	14.31	13.29
Merged-chr2-99055438-2	chr2	99055190	99055689	Intergenic	L1M4|LINE|L1	5882	ENSG00000040933	INPP4A	inositol polyphosphate-4-phosphatase type I A	5.44	14.65	12.53
Merged-chr20-47374973-2	chr20	47374725	47375224	"intron (NM_020820, intron 1 of 39)"	"intron (NM_020820, intron 1 of 39)"	-69446	ENSG00000124126	PREX1	"phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1"	4.08	18.31	15.57
Merged-chr1-11741290-2	chr1	11741041	11741540	promoter-TSS (NM_006341)	promoter-TSS (NM_006341)	19	ENSG00000116670	MAD2L2	MAD2 mitotic arrest deficient-like 2 (yeast)	10.2	23.3	21.65
Merged-chr9-115819075-2	chr9	115818827	115819326	promoter-TSS (NM_001282518)	promoter-TSS (NM_001282518)	5	ENSG00000136866	ZFP37	ZFP37 zinc finger protein	5.21	14.65	15.19
Merged-chr1-236579652-2	chr1	236579404	236579903	"intron (NM_145861, intron 3 of 5)"	"intron (NM_145861, intron 3 of 5)"	-20937	ENSG00000186197	EDARADD	EDAR-associated death domain	6.35	18.97	18.99
Merged-chr8-67341184-2	chr8	67340935	67341434	promoter-TSS (NR_040434)	promoter-TSS (NR_040434)	-28	ENSG00000246145	RRS1-AS1	RRS1 antisense RNA 1 (head to head)	8.39	19.31	18.61
Merged-chr6-167412735-2	chr6	167412486	167412985	promoter-TSS (NM_007045)	promoter-TSS (NM_007045)	70	ENSG00000213066	FGFR1OP	FGFR1 oncogene partner	21.09	46.6	43.29
Merged-chr3-57542010-2	chr3	57541761	57542260	promoter-TSS (NM_177966)	promoter-TSS (NM_177966)	-29		PDE12	phosphodiesterase 12	7.71	15.98	18.61
Merged-chr7-38272737-2	chr7	38272489	38272988	Intergenic	Intergenic	-40510		TARP	TCR gamma alternate reading frame protein	5.21	21.3	22.03
Merged-chr20-50017133-2	chr20	50016884	50017383	"intron (NM_001258296, intron 9 of 10)"	"intron (NM_001258296, intron 9 of 10)"	-52381	ENSG00000266761	MIR3194	microRNA 3194	4.99	15.64	20.13
Merged-chr6-152956116-2	chr6	152955867	152956366	"intron (NM_182961, intron 2 of 145)"	"intron (NM_182961, intron 2 of 145)"	-1870	ENSG00000131018	SYNE1	"spectrin repeat containing, nuclear envelope 1"	3.4	17.31	13.29
Merged-chr6-101329271-2	chr6	101329023	101329522	promoter-TSS (NM_001284271)	promoter-TSS (NM_001284271)	24	ENSG00000112249	ASCC3	activating signal cointegrator 1 complex subunit 3	9.52	24.96	24.31
Merged-chr1-211432616-2	chr1	211432367	211432866	promoter-TSS (NM_001136223)	promoter-TSS (NM_001136223)	92	ENSG00000117625	RCOR3	REST corepressor 3	10.2	23.63	23.17
Merged-chr7-27135759-2	chr7	27135511	27136010	promoter-TSS (NM_153620)	promoter-TSS (NM_153620)	-47	ENSG00000233429	HOTAIRM1	"HOXA transcript antisense RNA, myeloid-specific 1"	6.8	14.31	14.05
Merged-chr2-136996520-2	chr2	136996272	136996771	Intergenic	Intergenic	120796	ENSG00000121966	CXCR4	chemokine (C-X-C motif) receptor 4	5.67	17.31	12.53
Merged-chr8-61429568-2	chr8	61429319	61429818	promoter-TSS (NM_002865)	promoter-TSS (NM_002865)	-99	ENSG00000104388	RAB2A	"RAB2A, member RAS oncogene family"	10.66	22.3	25.82
Merged-chr2-162023419-2	chr2	162023171	162023670	"intron (NM_001199135, intron 1 of 7)"	"intron (NM_001199135, intron 1 of 7)"	-6481	ENSG00000136560	TANK	TRAF family member-associated NFKB activator	3.63	11.65	12.15
Merged-chr11-33060858-2	chr11	33060610	33061109	promoter-TSS (NM_018393)	promoter-TSS (NM_018393)	104	ENSG00000176148	TCP11L1	"t-complex 11, testis-specific-like 1"	7.48	15.64	20.51
Merged-chr3-185827039-2	chr3	185826790	185827289	promoter-TSS (NM_004454)	promoter-TSS (NM_004454)	138	ENSG00000244405	ETV5	ets variant 5	9.07	24.63	21.65
Merged-chr10-52268257-2	chr10	52268008	52268507	"intron (NM_147156, intron 3 of 10)"	"intron (NM_147156, intron 3 of 10)"	-115480	ENSG00000198964	SGMS1	sphingomyelin synthase 1	2.49	17.31	12.15
Merged-chr17-34948242-2	chr17	34947993	34948492	promoter-TSS (NM_024308)	promoter-TSS (NM_024308)	-16	ENSG00000278535	DHRS11	dehydrogenase/reductase (SDR family) member 11	5.9	16.98	19.37
Merged-chr16-5008238-2	chr16	5007989	5008488	promoter-TSS (NM_014692)	promoter-TSS (NM_014692)	80	ENSG00000103184	SEC14L5	SEC14-like lipid binding 5	4.76	12.65	12.53
Merged-chr4-1171132-2	chr4	1170884	1171383	"intron (NM_001199021, intron 2 of 7)"	"intron (NM_001199021, intron 2 of 7)"	4134	ENSG00000159674	SPON2	"spondin 2, extracellular matrix protein"	3.63	13.98	16.71
Merged-chr10-72339683-2	chr10	72339434	72339933	Intergenic	MLT1K|LTR|ERVL-MaLR	-22848	ENSG00000180644	PRF1	perforin 1 (pore forming protein)	2.95	12.65	12.91
Merged-chr1-2518003-2	chr1	2517755	2518254	promoter-TSS (NM_001195741)	promoter-TSS (NM_001195741)	-105	ENSG00000157870	FAM213B	"family with sequence similarity 213, member B"	12.7	27.96	33.42
Merged-chr14-91695161-2	chr14	91694913	91695412	Intergenic	Intergenic	-15690	ENSG00000119714	GPR68	G protein-coupled receptor 68	6.8	16.31	14.81
Merged-chr1-40562968-2	chr1	40562720	40563219	"5' UTR (NM_000310, exon 1 of 9)"	"5' UTR (NM_000310, exon 1 of 9)"	-173	ENSG00000131238	PPT1	palmitoyl-protein thioesterase 1	5.9	15.31	17.85
Merged-chr2-96811226-2	chr2	96810978	96811477	promoter-TSS (NM_004418)	promoter-TSS (NM_004418)	48	ENSG00000158050	DUSP2	dual specificity phosphatase 2	11.11	26.96	34.56
Merged-chr8-38627848-2	chr8	38627600	38628099	"intron (NM_001146216, intron 1 of 12)"	"intron (NM_001146216, intron 1 of 12)"	16873	ENSG00000147526	TACC1	"transforming, acidic coiled-coil containing protein 1"	8.62	20.64	21.27
Merged-chr1-26710748-2	chr1	26710500	26710999	Intergenic	L1MB5|LINE|L1	11483	ENSG00000176083	ZNF683	zinc finger protein 683	3.17	9.99	11.77
Merged-chr2-177717518-2	chr2	177717270	177717769	Intergenic	Intergenic	-215037	ENSG00000224577	LINC01117	long intergenic non-protein coding RNA 1117	4.53	17.97	15.95
Merged-chr5-131892666-2	chr5	131892417	131892916	promoter-TSS (NM_005732)	promoter-TSS (NM_005732)	-50		RAD50	"RAD50 homolog, double strand break repair protein"	9.07	22.97	22.79
Merged-chr7-104624444-2	chr7	104624195	104624694	"non-coding (NR_039981, exon 1 of 1)"	"non-coding (NR_039981, exon 1 of 1)"	-7168		LINC01004	long intergenic non-protein coding RNA 1004	9.75	21.3	22.03
Merged-chr5-180288296-2	chr5	180288048	180288547	promoter-TSS (NM_152283)	promoter-TSS (NM_152283)	11	ENSG00000196670	ZFP62	ZFP62 zinc finger protein	5.44	21.64	26.96
Merged-chr3-128840819-2	chr3	128840571	128841070	promoter-TSS (NM_001204888)	promoter-TSS (NM_001204888)	-37	ENSG00000172780	RAB43	"RAB43, member RAS oncogene family"	3.85	9.32	10.25
Merged-chr5-138897683-2	chr5	138897435	138897934	Intergenic	CpG	35341	ENSG00000184584	TMEM173	transmembrane protein 173	7.71	17.31	16.33
Merged-chr21-17106253-2	chr21	17106004	17106503	"intron (NM_001283041, intron 1 of 25)"	"intron (NM_001283041, intron 1 of 25)"	-3909	ENSG00000155313	USP25	ubiquitin specific peptidase 25	5.44	12.98	11.39
Merged-chr20-37376815-2	chr20	37376567	37377066	promoter-TSS (NM_024855)	promoter-TSS (NM_024855)	281	ENSG00000101442	ACTR5	ARP5 actin-related protein 5 homolog (yeast)	12.92	26.63	29.24
Merged-chr20-47894895-2	chr20	47894646	47895145	promoter-TSS (NR_036659)	promoter-TSS (NR_036659)	139	ENSG00000124201	ZNFX1	"zinc finger, NFX1-type containing 1"	22.67	51.26	45.57
Merged-chr7-66119427-2	chr7	66119179	66119678	promoter-TSS (NR_110037)	promoter-TSS (NR_110037)	78		LOC100996437	uncharacterized LOC100996437	15.87	31.95	33.8
Merged-chr11-67035676-2	chr11	67035427	67035926	"intron (NM_001619, intron 1 of 20)"	"intron (NM_001619, intron 1 of 20)"	-1771	ENSG00000173020	ADRBK1	"adrenergic, beta, receptor kinase 1"	4.31	24.63	19.37
Merged-chr14-25142840-2	chr14	25142592	25143091	Intergenic	Intergenic	39409	ENSG00000100453	GZMB	granzyme B	8.84	27.63	20.13
Merged-chr9-117267864-2	chr9	117267616	117268115	promoter-TSS (NM_001173425)	promoter-TSS (NM_001173425)	129	ENSG00000095397	DFNB31	"deafness, autosomal recessive 31"	10.2	22.97	23.17
Merged-chr9-34380868-2	chr9	34380619	34381118	"intron (NM_147169, intron 2 of 3)"	CpG	-730	ENSG00000164972	C9orf24	chromosome 9 open reading frame 24	6.35	12.98	16.71
Merged-chr1-200638903-2	chr1	200638655	200639154	"5' UTR (NM_001031725, exon 1 of 8)"	"5' UTR (NM_001031725, exon 1 of 8)"	-222	ENSG00000118197	DDX59	DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	9.52	19.97	26.96
Merged-chr10-135207613-2	chr10	135207365	135207864	promoter-TSS (NM_138384)	promoter-TSS (NM_138384)	7	ENSG00000148824	MTG1	mitochondrial ribosome-associated GTPase 1	11.79	25.3	29.24
Merged-chr1-33264826-2	chr1	33264577	33265076	"intron (NM_003680, intron 4 of 12)"	L2c|LINE|L2	18217	ENSG00000116497	S100PBP	S100P binding protein	5.67	20.64	16.71
Merged-chr2-15731977-2	chr2	15731729	15732228	"5' UTR (NM_004939, exon 1 of 26)"	"5' UTR (NM_004939, exon 1 of 26)"	-233	ENSG00000079785	DDX1	DEAD (Asp-Glu-Ala-Asp) box helicase 1	7.94	16.31	17.47
Merged-chr2-215674626-2	chr2	215674377	215674876	promoter-TSS (NM_001282543)	promoter-TSS (NM_001282543)	191	ENSG00000138376	BARD1	BRCA1 associated RING domain 1	15.64	39.94	52.79
Merged-chr19-1853521-2	chr19	1853273	1853772	"3' UTR (NM_031918, exon 2 of 2)"	"3' UTR (NM_031918, exon 2 of 2)"	5070	ENSG00000079313	REXO1	"REX1, RNA exonuclease 1 homolog"	4.76	13.65	12.15
Merged-chr1-46216414-2	chr1	46216165	46216664	promoter-TSS (NM_005897)	promoter-TSS (NM_005897)	-71	ENSG00000197429	IPP	intracisternal A particle-promoted polypeptide	13.38	33.62	33.8
Merged-chr1-10458991-2	chr1	10458743	10459242	promoter-TSS (NM_002631)	promoter-TSS (NM_002631)	93	ENSG00000142657	PGD	phosphogluconate dehydrogenase	17	38.61	37.6
Merged-chr6-53213791-2	chr6	53213542	53214041	"5' UTR (NM_021814, exon 1 of 8)"	"5' UTR (NM_021814, exon 1 of 8)"	-186	ENSG00000012660	ELOVL5	ELOVL fatty acid elongase 5	12.24	31.62	27.34
Merged-chr5-102594308-2	chr5	102594060	102594559	promoter-TSS (NM_033211)	promoter-TSS (NM_033211)	133	ENSG00000181751	C5orf30	chromosome 5 open reading frame 30	13.38	32.62	28.86
Merged-chr11-72463497-2	chr11	72463249	72463748	promoter-TSS (NM_001040118)	promoter-TSS (NM_001040118)	64	ENSG00000186635	ARAP1	"ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1"	5.9	16.64	21.27
Merged-chr9-133454925-2	chr9	133454677	133455176	promoter-TSS (NM_003934)	promoter-TSS (NM_003934)	34	ENSG00000107164	FUBP3	far upstream element (FUSE) binding protein 3	9.98	20.64	20.89
Merged-chr3-119182681-2	chr3	119182432	119182931	promoter-TSS (NM_018266)	promoter-TSS (NM_018266)	152	ENSG00000176142	TMEM39A	transmembrane protein 39A	19.05	41.27	45.57
Merged-chr9-26892767-2	chr9	26892519	26893018	promoter-TSS (NM_001167575)	promoter-TSS (NM_001167575)	-58	ENSG00000120159	CAAP1	caspase activity and apoptosis inhibitor 1	9.3	18.97	21.65
Merged-chr6-157342969-2	chr6	157342721	157343220	"intron (NM_020732, intron 5 of 19)"	CpG	242105	ENSG00000271899	MIR4466	microRNA 4466	6.58	15.98	24.68
Merged-chr19-16191114-2	chr19	16190865	16191364	"intron (NM_003290, intron 1 of 7)"	MIRc|SINE|MIR	-3979	ENSG00000167460	TPM4	tropomyosin 4	3.63	13.65	14.43
Merged-chr7-148823425-2	chr7	148823177	148823676	promoter-TSS (NM_020781)	promoter-TSS (NM_020781)	-12	ENSG00000204947	ZNF425	zinc finger protein 425	10.66	23.3	25.82
Merged-chr13-95248504-2	chr13	95248256	95248755	promoter-TSS (NM_014305)	promoter-TSS (NM_014305)	-6	ENSG00000088451	TGDS	"TDP-glucose 4,6-dehydratase"	9.07	21.64	21.27
Merged-chr16-74641042-2	chr16	74640793	74641292	promoter-TSS (NM_001145667)	promoter-TSS (NM_001145667)	0	ENSG00000090863	GLG1	golgi glycoprotein 1	11.34	26.96	27.72
Merged-chr2-179345121-2	chr2	179344873	179345372	promoter-TSS (NM_019091)	promoter-TSS (NM_019091)	77		PLEKHA3	"pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3"	5.21	17.64	16.33
Merged-chr10-126339262-2	chr10	126339013	126339512	"intron (NM_014661, intron 4 of 4)"	"intron (NM_014661, intron 4 of 4)"	53335		FAM53B-AS1	FAM53B antisense RNA 1	5.21	16.31	13.67
Merged-chr16-71323367-2	chr16	71323118	71323617	promoter-TSS (NM_001099642)	promoter-TSS (NM_001099642)	52	ENSG00000180917	CMTR2	cap methyltransferase 2	7.71	17.97	21.27
Merged-chr1-155294232-2	chr1	155293984	155294483	promoter-TSS (NR_103478)	promoter-TSS (NR_103478)	-47	ENSG00000160753	RUSC1	RUN and SH3 domain containing 1	10.2	23.3	26.58
Merged-chr4-7044845-2	chr4	7044596	7045095	promoter-TSS (NM_153376)	promoter-TSS (NM_153376)	117	ENSG00000173013	CCDC96	coiled-coil domain containing 96	12.02	25.63	31.14
Merged-chr8-103668126-2	chr8	103667878	103668377	promoter-TSS (NM_005655)	promoter-TSS (NM_005655)	-3	ENSG00000155090	KLF10	Kruppel-like factor 10	13.15	30.96	41.01
Merged-chr2-7865838-2	chr2	7865590	7866089	Intergenic	Intergenic	-173947	ENSG00000226506	LOC101929551	uncharacterized LOC101929551	4.76	16.64	14.81
Merged-chr14-91294606-2	chr14	91294358	91294857	Intergenic	Intergenic	11846		TTC7B	tetratricopeptide repeat domain 7B	11.56	25.3	28.86
Merged-chr10-51572321-2	chr10	51572072	51572571	promoter-TSS (NM_005437)	promoter-TSS (NM_005437)	43	ENSG00000266412	NCOA4	nuclear receptor coactivator 4	4.08	16.98	15.19
Merged-chr16-57844344-2	chr16	57844096	57844595	promoter-TSS (NM_001278081)	promoter-TSS (NM_001278081)	204		LOC388282	uncharacterized LOC388282	2.27	18.31	19.37
Merged-chr1-11333279-2	chr1	11333030	11333529	promoter-TSS (NM_013319)	promoter-TSS (NM_013319)	-24	ENSG00000120942	UBIAD1	UbiA prenyltransferase domain containing 1	6.8	13.65	17.47
Merged-chrX-103411066-2	chrX	103410818	103411317	promoter-TSS (NM_207318)	promoter-TSS (NM_207318)	89	ENSG00000123575	FAM199X	"family with sequence similarity 199, X-linked"	6.35	14.31	14.05
Merged-chr1-198648860-2	chr1	198648612	198649111	"intron (NR_052021, intron 2 of 2)"	"intron (NR_052021, intron 2 of 2)"	-40763	ENSG00000081237	PTPRC	"protein tyrosine phosphatase, receptor type, C"	3.17	13.31	16.33
Merged-chr15-52971650-2	chr15	52971401	52971900	promoter-TSS (NM_019600)	promoter-TSS (NM_019600)	819	ENSG00000047346	FAM214A	"family with sequence similarity 214, member A"	9.07	26.96	23.93
Merged-chr14-71787337-2	chr14	71787089	71787588	Intergenic	CpG	77716	ENSG00000207444	SNORD56B	"small nucleolar RNA, C/D box 56B"	7.26	15.98	17.47
Merged-chr17-1012677-2	chr17	1012428	1012927	promoter-TSS (NM_001092)	promoter-TSS (NM_001092)	337	ENSG00000159842	ABR	active BCR-related	4.99	13.98	15.95
Merged-chr20-48807041-2	chr20	48806793	48807292	promoter-TSS (NM_001285878)	promoter-TSS (NM_001285878)	78	ENSG00000172216	CEBPB	"CCAAT/enhancer binding protein (C/EBP), beta"	6.35	18.97	17.47
Merged-chr13-40963011-2	chr13	40962763	40963262	"intron (NR_024506, intron 5 of 5)"	"intron (NR_024506, intron 5 of 5)"	-92131	ENSG00000215483	LINC00598	long intergenic non-protein coding RNA 598	7.71	20.64	22.03
Merged-chr4-8411409-2	chr4	8411161	8411660	"intron (NM_003501, intron 6 of 17)"	"intron (NM_003501, intron 6 of 17)"	-31042	ENSG00000087008	ACOX3	"acyl-CoA oxidase 3, pristanoyl"	0.91	21.64	12.15
Merged-chr12-96867329-2	chr12	96867081	96867580	Intergenic	Intergenic	72964	ENSG00000059758	CDK17	cyclin-dependent kinase 17	2.72	13.31	9.49
Merged-chr20-47538217-2	chr20	47537968	47538467	promoter-TSS (NM_006420)	promoter-TSS (NM_006420)	58	ENSG00000124198	ARFGEF2	ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	10.88	21.97	23.17
Merged-chr22-22011877-2	chr22	22011628	22012127	Intergenic	CpG	-4284	ENSG00000207751	MIR130B	microRNA 130b	6.35	16.98	21.27
Merged-chr15-65903574-2	chr15	65903326	65903825	promoter-TSS (NR_045105)	promoter-TSS (NR_045105)	-52	ENSG00000138614	VWA9	von Willebrand factor A domain containing 9	9.52	25.96	24.68
Merged-chr7-158616912-2	chr7	158616663	158617162	"intron (NM_020728, intron 1 of 21)"	"intron (NM_020728, intron 1 of 21)"	-5407	ENSG00000117868	ESYT2	extended synaptotagmin-like protein 2	6.35	20.64	14.43
Merged-chrX-77359556-2	chrX	77359307	77359806	promoter-TSS (NM_000291)	promoter-TSS (NM_000291)	110		PGK1	phosphoglycerate kinase 1	16.1	32.62	40.26
Merged-chr1-53686158-2	chr1	53685910	53686409	"intron (NM_017887, intron 1 of 7)"	CpG	-130	ENSG00000162384	C1orf123	chromosome 1 open reading frame 123	12.7	26.3	25.82
Merged-chr20-32319957-2	chr20	32319709	32320208	"intron (NR_104259, intron 1 of 13)"	CpG	-392	ENSG00000131061	ZNF341	zinc finger protein 341	10.2	21.97	25.44
Merged-chr6-138043999-2	chr6	138043751	138044250	Intergenic	Intergenic	-16174	ENSG00000234956	LOC100507406	uncharacterized LOC100507406	1.13	8.99	8.73
Merged-chr20-60692939-2	chr20	60692691	60693190	Intergenic	MIRb|SINE|MIR	4577	ENSG00000149657	LSM14B	LSM family member 14B	7.71	16.64	18.99
Merged-chr17-79995485-2	chr17	79995237	79995736	promoter-TSS (NM_016286)	promoter-TSS (NM_016286)	-87	ENSG00000169738	DCXR	dicarbonyl/L-xylulose reductase	13.83	31.29	34.18
Merged-chr12-123451076-2	chr12	123450827	123451326	promoter-TSS (NM_019624)	promoter-TSS (NM_019624)	20	ENSG00000150967	ABCB9	ATP binding cassette subfamily B member 9	8.39	22.63	20.13
Merged-chr17-3698474-2	chr17	3698226	3698725	"intron (NM_002208, intron 1 of 30)"	"intron (NM_002208, intron 1 of 30)"	-6062	ENSG00000083457	ITGAE	integrin alpha E	4.99	25.96	15.95
Merged-chr1-1447450-2	chr1	1447202	1447701	promoter-TSS (NM_001170536)	promoter-TSS (NM_001170536)	72	ENSG00000197785	ATAD3A	"ATPase family, AAA domain containing 3A"	10.66	22.63	23.17
Merged-chr2-166651233-2	chr2	166650985	166651484	promoter-TSS (NM_004482)	promoter-TSS (NM_004482)	431	ENSG00000115339	GALNT3	polypeptide N-acetylgalactosaminyltransferase 3	2.95	14.31	11.77
Merged-chr2-96823764-2	chr2	96823515	96824014	Intergenic	Intergenic	12585	ENSG00000158050	DUSP2	dual specificity phosphatase 2	6.8	14.98	17.09
Merged-chr12-8142893-2	chr12	8142645	8143144	Intergenic	Intergenic	42465	ENSG00000065970	FOXJ2	forkhead box J2	4.53	16.31	14.81
Merged-chr20-50030952-2	chr20	50030703	50031202	"intron (NM_001258296, intron 9 of 10)"	AluSx|SINE|Alu	-38562	ENSG00000266761	MIR3194	microRNA 3194	0.91	3.66	3.04
Merged-chr4-40267100-2	chr4	40266851	40267350	Intergenic	Intergenic	42102	ENSG00000249241	LOC101060498	uncharacterized LOC101060498	4.99	16.98	15.19
Merged-chr1-150488137-2	chr1	150487888	150488387	promoter-TSS (NR_051960)	promoter-TSS (NR_051960)	96	ENSG00000228126	FALEC	focally amplified long non-coding RNA in epithelial cancer	8.39	23.97	29.62
Merged-chr14-24799074-2	chr14	24798826	24799325	"exon (NM_139247, exon 9 of 26)"	"exon (NM_139247, exon 9 of 26)"	-5202	ENSG00000129467	ADCY4	adenylate cyclase 4	1.81	15.31	12.91
Merged-chr2-111433028-2	chr2	111432779	111433278	"intron (NM_001278617, intron 1 of 23)"	L2a|LINE|L2	-2656	ENSG00000169679	BUB1	BUB1 mitotic checkpoint serine/threonine kinase	3.85	19.97	15.19
Merged-chr17-4693666-2	chr17	4693417	4693916	"3' UTR (NM_001014985, exon 4 of 4)"	"3' UTR (NM_001014985, exon 4 of 4)"	-1412	ENSG00000182327	GLTPD2	glycolipid transfer protein domain containing 2	7.71	25.63	17.85
Merged-chr13-50571254-2	chr13	50571005	50571504	promoter-TSS (NR_037407)	promoter-TSS (NR_037407)	-111	ENSG00000204977	TRIM13	tripartite motif containing 13	2.72	5.99	9.87
Merged-chr16-27413530-2	chr16	27413281	27413780	promoter-TSS (NM_181079)	promoter-TSS (NM_181079)	-47	ENSG00000103522	IL21R	interleukin 21 receptor	18.82	56.58	43.29
Merged-chr2-99224968-2	chr2	99224720	99225219	promoter-TSS (NM_014044)	promoter-TSS (NM_014044)	-12	ENSG00000183513	COA5	cytochrome c oxidase assembly factor 5	11.56	27.63	29.24
Merged-chr1-155829601-2	chr1	155829352	155829851	promoter-TSS (NM_001282856)	promoter-TSS (NM_001282856)	-341	ENSG00000132718	SYT11	synaptotagmin XI	3.17	6.99	6.84
Merged-chr11-62573023-2	chr11	62572775	62573274	promoter-TSS (NM_006362)	promoter-TSS (NM_006362)	60	ENSG00000162231	NXF1	nuclear RNA export factor 1	18.59	39.94	37.98
Merged-chr19-11200075-2	chr19	11199827	11200326	promoter-TSS (NM_001195798)	promoter-TSS (NM_001195798)	-38	ENSG00000130164	LDLR	low density lipoprotein receptor	7.03	16.64	15.19
Merged-chr16-89888118-2	chr16	89887870	89888369	Intergenic	Intergenic	5054	ENSG00000187741	FANCA	Fanconi anemia complementation group A	1.59	12.98	11.39
Merged-chr20-52532558-2	chr20	52532310	52532809	Intergenic	Intergenic	40311		SUMO1P1	SUMO1 pseudogene 1	7.94	16.31	15.95
Merged-chr10-379799-2	chr10	379551	380050	"intron (NM_014974, intron 29 of 36)"	L1MB8|LINE|L1	-153866	ENSG00000015171	ZMYND11	"zinc finger, MYND-type containing 11"	5.44	13.98	13.67
Merged-chr16-2765686-2	chr16	2765438	2765937	"intron (NM_031948, intron 3 of 5)"	CpG	-4865		PRSS27	"protease, serine 27"	6.8	20.3	15.95
Merged-chr8-145980951-2	chr8	145980702	145981201	promoter-TSS (NM_138367)	promoter-TSS (NM_138367)	-19	ENSG00000198169	ZNF251	zinc finger protein 251	16.1	33.29	35.7
Merged-chr2-86080591-2	chr2	86080342	86080841	"intron (NM_001042437, intron 3 of 6)"	"intron (NM_001042437, intron 3 of 6)"	-14202	ENSG00000115525	ST3GAL5	"ST3 beta-galactoside alpha-2,3-sialyltransferase 5"	7.03	17.64	20.51
Merged-chr21-46237830-2	chr21	46237581	46238080	"intron (NM_001286416, intron 1 of 3)"	CpG	-214	ENSG00000184900	SUMO3	small ubiquitin-like modifier 3	12.24	26.96	26.96
Merged-chr19-12900877-2	chr19	12900628	12901127	Intergenic	CpG	1433	ENSG00000171223	JUNB	jun B proto-oncogene	12.7	33.29	34.94
Merged-chr1-976233-2	chr1	975984	976483	"exon (NM_198576, exon 4 of 36)"	"exon (NM_198576, exon 4 of 36)"	-20730	ENSG00000188157	AGRN	agrin	4.99	15.98	13.67
Merged-chr20-24929755-2	chr20	24929506	24930005	promoter-TSS (NM_003650)	promoter-TSS (NM_003650)	111	ENSG00000077984	CST7	cystatin F (leukocystatin)	7.03	25.63	18.23
Merged-chr15-86189872-2	chr15	86189624	86190123	"intron (NM_007200, intron 10 of 36)"	"intron (NM_007200, intron 10 of 36)"	-26692	ENSG00000170776	AKAP13	A kinase (PRKA) anchor protein 13	4.53	12.65	12.15
Merged-chr9-99180878-2	chr9	99180630	99181129	promoter-TSS (NM_153695)	promoter-TSS (NM_153695)	210	ENSG00000165244	ZNF367	zinc finger protein 367	14.74	38.61	39.5
Merged-chr19-45256800-2	chr19	45256552	45257051	"intron (NM_005178, intron 2 of 8)"	"intron (NM_005178, intron 2 of 8)"	-4823	ENSG00000069399	BCL3	B-cell CLL/lymphoma 3	12.92	29.96	28.48
Merged-chr5-40679845-2	chr5	40679596	40680095	promoter-TSS (NM_000958)	promoter-TSS (NM_000958)	187	ENSG00000171522	PTGER4	prostaglandin E receptor 4 (subtype EP4)	7.94	20.97	28.1
Merged-chr15-38856907-2	chr15	38856658	38857157	promoter-TSS (NM_001128602)	promoter-TSS (NM_001128602)	-100	ENSG00000172575	RASGRP1	RAS guanyl releasing protein 1 (calcium and DAG-regulated)	10.2	23.3	22.03
Merged-chr10-73078915-2	chr10	73078667	73079166	promoter-TSS (NM_018344)	promoter-TSS (NM_018344)	94	ENSG00000198246	SLC29A3	"solute carrier family 29 (equilibrative nucleoside transporter), member 3"	9.07	26.63	26.2
Merged-chr11-3071215-2	chr11	3070966	3071465	"intron (NM_001014437, intron 1 of 22)"	"intron (NM_001014437, intron 1 of 22)"	-7466	ENSG00000110619	CARS	cysteinyl-tRNA synthetase	2.72	16.31	17.85
Merged-chr1-53019244-2	chr1	53018995	53019494	promoter-TSS (NM_015269)	promoter-TSS (NM_015269)	482	ENSG00000134744	ZCCHC11	"zinc finger, CCHC domain containing 11"	9.07	21.64	22.79
Merged-chr20-57465971-2	chr20	57465722	57466221	promoter-TSS (NM_080426)	promoter-TSS (NM_080426)	455	ENSG00000087460	GNAS	GNAS complex locus	4.53	9.99	12.15
Merged-chr4-170541627-2	chr4	170541378	170541877	promoter-TSS (NM_001243372)	promoter-TSS (NM_001243372)	45	ENSG00000109572	CLCN3	"chloride channel, voltage-sensitive 3"	11.56	24.96	28.48
Merged-chr19-10196910-2	chr19	10196661	10197160	"5' UTR (NM_018381, exon 1 of 8)"	"5' UTR (NM_018381, exon 1 of 8)"	-104	ENSG00000130813	C19orf66	chromosome 19 open reading frame 66	9.52	26.96	26.58
Merged-chr19-6675058-2	chr19	6674809	6675308	Intergenic	Intergenic	4459	ENSG00000125735	TNFSF14	"tumor necrosis factor (ligand) superfamily, member 14"	3.85	12.32	16.71
Merged-chr1-12040339-2	chr1	12040091	12040590	"5' UTR (NM_014874, exon 1 of 19)"	"5' UTR (NM_014874, exon 1 of 19)"	-102	ENSG00000116688	MFN2	mitofusin 2	17.91	38.28	38.74
Merged-chr17-2696246-2	chr17	2695997	2696496	Intergenic	Intergenic	3486	ENSG00000132359	RAP1GAP2	RAP1 GTPase activating protein 2	2.95	13.31	13.29
Merged-chr5-94982487-2	chr5	94982239	94982738	promoter-TSS (NM_001131066)	promoter-TSS (NM_001131066)	-7	ENSG00000175449	RFESD	Rieske (Fe-S) domain containing	10.66	22.63	26.58
Merged-chr12-65153263-2	chr12	65153015	65153514	promoter-TSS (NM_002076)	promoter-TSS (NM_002076)	38	ENSG00000135677	GNS	glucosamine (N-acetyl)-6-sulfatase	7.03	18.64	20.89
Merged-chr2-27309514-2	chr2	27309265	27309764	promoter-TSS (NM_006488)	promoter-TSS (NM_006488)	97	ENSG00000138030	KHK	ketohexokinase	12.92	26.63	29.24
Merged-chr15-101792206-2	chr15	101791958	101792457	promoter-TSS (NM_014918)	promoter-TSS (NM_014918)	70	ENSG00000131873	CHSY1	chondroitin sulfate synthase 1	7.71	18.31	16.33
Merged-chr14-102976281-2	chr14	102976033	102976532	promoter-TSS (NM_152326)	promoter-TSS (NM_152326)	154	ENSG00000156381	ANKRD9	ankyrin repeat domain 9	8.16	22.97	22.41
Merged-chr17-80840719-2	chr17	80840471	80840970	"intron (NM_005993, intron 14 of 38)"	"intron (NM_005993, intron 14 of 38)"	42789	ENSG00000141579	ZNF750	zinc finger protein 750	7.71	30.62	29.62
Merged-chr1-184813064-2	chr1	184812816	184813315	"intron (NM_052966, intron 5 of 13)"	"intron (NM_052966, intron 5 of 13)"	89024	ENSG00000116406	EDEM3	"ER degradation enhancer, mannosidase alpha-like 3"	2.04	9.32	11.77
Merged-chr2-220041798-2	chr2	220041550	220042049	promoter-TSS (NM_015680)	promoter-TSS (NM_015680)	97	ENSG00000115649	CNPPD1	cyclin Pas1/PHO80 domain containing 1	14.74	32.95	30.76
Merged-chr18-51751089-2	chr18	51750841	51751340	promoter-TSS (NM_003927)	promoter-TSS (NM_003927)	-68	ENSG00000134046	MBD2	methyl-CpG binding domain protein 2	10.88	30.62	31.52
Merged-chr5-75839033-2	chr5	75838785	75839284	"intron (NM_006633, intron 2 of 35)"	"intron (NM_006633, intron 2 of 35)"	4200	ENSG00000145703	IQGAP2	IQ motif containing GTPase activating protein 2	7.26	15.98	15.19
Merged-chr10-104001432-2	chr10	104001183	104001682	promoter-TSS (NM_005029)	promoter-TSS (NM_005029)	201	ENSG00000107859	PITX3	paired-like homeodomain 3	10.88	31.29	29.62
Merged-chr1-212965182-2	chr1	212964934	212965433	promoter-TSS (NM_001297739)	promoter-TSS (NM_001297739)	-13	ENSG00000203705	TATDN3	TatD DNase domain containing 3	6.58	13.65	19.75
Merged-chr17-40333371-2	chr17	40333123	40333622	promoter-TSS (NM_012285)	promoter-TSS (NM_012285)	76	ENSG00000089558	KCNH4	"potassium channel, voltage gated eag related subfamily H, member 4"	7.71	26.3	20.89
Merged-chr14-50698361-2	chr14	50698113	50698612	promoter-TSS (NM_006939)	promoter-TSS (NM_006939)	263	ENSG00000100485	SOS2	SOS Ras/Rho guanine nucleotide exchange factor 2	8.39	18.64	22.03
Merged-chr3-32148031-2	chr3	32147782	32148281	promoter-TSS (NM_015141)	promoter-TSS (NM_015141)	-28	ENSG00000152642	GPD1L	glycerol-3-phosphate dehydrogenase 1-like	15.19	31.29	37.98
Merged-chr15-64302085-2	chr15	64301837	64302336	"intron (NM_014326, intron 2 of 11)"	"intron (NM_014326, intron 2 of 11)"	-36435	ENSG00000035664	DAPK2	death-associated protein kinase 2	6.35	12.98	13.29
Merged-chr16-2301624-2	chr16	2301375	2301874	promoter-TSS (NM_001178029)	promoter-TSS (NM_001178029)	22	ENSG00000167969	ECI1	enoyl-CoA delta isomerase 1	4.99	14.98	13.29
Merged-chr10-74079522-2	chr10	74079274	74079773	Intergenic	CpG	-35384	ENSG00000148719	DNAJB12	"DnaJ (Hsp40) homolog, subfamily B, member 12"	7.48	19.97	19.75
Merged-chr21-45563436-2	chr21	45563187	45563686	"intron (NM_198155, intron 5 of 5)"	"intron (NM_198155, intron 5 of 5)"	-9942	ENSG00000160221	C21orf33	chromosome 21 open reading frame 33	5.21	17.64	22.41
Merged-chr17-37793361-2	chr17	37793113	37793612	promoter-TSS (NM_001165938)	promoter-TSS (NM_001165938)	-29		STARD3	StAR-related lipid transfer domain containing 3	9.07	18.97	24.31
Merged-chr2-9843457-2	chr2	9843208	9843707	Intergenic	Intergenic	72273	ENSG00000134308	YWHAQ	"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta"	4.76	31.95	26.58
Merged-chr4-139163572-2	chr4	139163323	139163822	promoter-TSS (NM_014331)	promoter-TSS (NM_014331)	69	ENSG00000151012	SLC7A11	"solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11"	2.27	12.65	14.05
Merged-chr2-231658893-2	chr2	231658645	231659144	"intron (NM_016289, intron 4 of 8)"	"intron (NM_016289, intron 4 of 8)"	70419	ENSG00000135916	ITM2C	integral membrane protein 2C	5.44	17.97	22.41
Merged-chr7-23338912-2	chr7	23338664	23339163	promoter-TSS (NM_138446)	promoter-TSS (NM_138446)	27		MALSU1	mitochondrial assembly of ribosomal large subunit 1	10.2	22.3	22.41
Merged-chr12-123380718-2	chr12	123380470	123380969	promoter-TSS (NM_024667)	promoter-TSS (NM_024667)	7	ENSG00000139722	VPS37B	vacuolar protein sorting 37 homolog B (S. cerevisiae)	10.88	25.96	29.62
Merged-chr12-124196837-2	chr12	124196588	124197087	promoter-TSS (NM_012463)	promoter-TSS (NM_012463)	28	ENSG00000185344	ATP6V0A2	"ATPase, H+ transporting, lysosomal V0 subunit a2"	8.84	19.64	19.37
Merged-chr3-142166890-2	chr3	142166641	142167140	promoter-TSS (NM_019001)	promoter-TSS (NM_019001)	-14	ENSG00000114127	XRN1	5'-3' exoribonuclease 1	9.98	25.96	24.31
Merged-chr4-146100811-2	chr4	146100562	146101061	promoter-TSS (NM_001102653)	promoter-TSS (NM_001102653)	-21	ENSG00000164164	OTUD4	OTU deubiquitinase 4	4.76	11.32	16.33
Merged-chr20-2854086-2	chr20	2853837	2854336	promoter-TSS (NM_080840)	promoter-TSS (NM_080840)	56	ENSG00000132670	PTPRA	"protein tyrosine phosphatase, receptor type, A"	10.2	23.3	23.17
Merged-chr16-56677425-2	chr16	56677177	56677676	promoter-TSS (NR_003658)	promoter-TSS (NR_003658)	173		MT1DP	"metallothionein 1D, pseudogene (functional)"	8.16	17.97	17.47
Merged-chr7-36824701-2	chr7	36824453	36824952	Intergenic	MER34C2|LTR|ERV1	60548	ENSG00000136250	AOAH	acyloxyacyl hydrolase (neutrophil)	9.98	21.97	21.27
Merged-chr16-30197296-2	chr16	30197048	30197547	"intron (NM_007074, intron 2 of 10)"	"intron (NM_007074, intron 2 of 10)"	-2566	ENSG00000102879	CORO1A	"coronin, actin binding protein, 1A"	11.34	23.97	22.79
Merged-chr22-39512217-2	chr22	39511968	39512467	Intergenic	MER4E1|LTR|ERV1	-18988	ENSG00000100298	APOBEC3H	"apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H"	1.13	8.99	9.87
Merged-chr21-40685689-2	chr21	40685441	40685940	promoter-TSS (NM_018963)	promoter-TSS (NM_018963)	-22	ENSG00000185658	BRWD1	bromodomain and WD repeat domain containing 1	8.84	20.64	18.23
Merged-chr19-13155158-2	chr19	13154909	13155408	"intron (NM_001271043, intron 2 of 10)"	"intron (NM_001271043, intron 2 of 10)"	-19763	ENSG00000008441	NFIX	nuclear factor I/X (CCAAT-binding transcription factor)	6.12	15.98	16.71
Merged-chr4-39355275-2	chr4	39355026	39355525	"intron (NM_002913, intron 1 of 24)"	"intron (NM_002913, intron 1 of 24)"	-12726	ENSG00000035928	RFC1	replication factor C subunit 1	4.08	11.65	9.49
Merged-chr21-46686662-2	chr21	46686414	46686913	"3' UTR (NM_015227, exon 8 of 8)"	"3' UTR (NM_015227, exon 8 of 8)"	-21148	ENSG00000186866	POFUT2	protein O-fucosyltransferase 2	2.95	20.3	24.31
Merged-chr9-132586483-2	chr9	132586234	132586733	promoter-TSS (NM_000113)	promoter-TSS (NM_000113)	42	ENSG00000136827	TOR1A	"torsin family 1, member A (torsin A)"	11.34	24.3	25.44
Merged-chr3-13521675-2	chr3	13521427	13521926	promoter-TSS (NM_024827)	promoter-TSS (NM_024827)	39	ENSG00000163517	HDAC11	histone deacetylase 11	15.42	35.62	33.42
Merged-chr9-92117187-2	chr9	92116939	92117438	Intergenic	Intergenic	22577	ENSG00000187764	SEMA4D	"sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D"	10.88	28.96	26.58
Merged-chr19-14517034-2	chr19	14516785	14517284	"intron (NM_001025160, intron 13 of 18)"	CpG	-13161	ENSG00000123136	DDX39A	DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A	11.56	25.63	28.86
Merged-chr2-219757718-2	chr2	219757470	219757969	"exon (NM_025216, exon 4 of 4)"	"exon (NM_025216, exon 4 of 4)"	-12464	ENSG00000135925	WNT10A	"wingless-type MMTV integration site family, member 10A"	9.75	32.62	34.18
Merged-chr3-30648065-2	chr3	30647817	30648316	promoter-TSS (NM_003242)	promoter-TSS (NM_003242)	-72	ENSG00000163513	TGFBR2	transforming growth factor beta receptor II	5.44	14.98	14.43
Merged-chr11-128421743-2	chr11	128421495	128421994	"intron (NM_001143820, intron 3 of 9)"	MIR|SINE|MIR	-25707	ENSG00000254588	LOC101929517	uncharacterized LOC101929517	4.31	11.98	11.39
Merged-chr12-109232311-2	chr12	109232063	109232562	"intron (NM_001161330, intron 2 of 13)"	"intron (NM_001161330, intron 2 of 13)"	10985	ENSG00000084112	SSH1	slingshot protein phosphatase 1	2.49	11.32	11.39
Merged-chr12-124938156-2	chr12	124937907	124938406	"intron (NM_001077261, intron 8 of 47)"	"intron (NM_001077261, intron 8 of 47)"	-113854	ENSG00000196498	NCOR2	nuclear receptor corepressor 2	14.06	37.95	31.52
Merged-chr15-43477574-2	chr15	43477325	43477824	TTS (NM_024956)	TTS (NM_024956)	-108	ENSG00000166946	CCNDBP1	cyclin D-type binding-protein 1	5.9	19.31	22.03
Merged-chr12-46662886-2	chr12	46662637	46663136	"5' UTR (NM_030674, exon 1 of 17)"	"5' UTR (NM_030674, exon 1 of 17)"	-322	ENSG00000111371	SLC38A1	"solute carrier family 38, member 1"	13.15	27.96	28.86
Merged-chr1-16276286-2	chr1	16276038	16276537	"intron (NM_001287604, intron 2 of 15)"	"intron (NM_001287604, intron 2 of 15)"	-26340	ENSG00000116809	ZBTB17	zinc finger and BTB domain containing 17	8.84	33.29	32.66
Merged-chr12-6602819-2	chr12	6602571	6603070	promoter-TSS (NM_016497)	promoter-TSS (NM_016497)	349		MRPL51	mitochondrial ribosomal protein L51	4.76	11.32	10.25
Merged-chr12-11324032-2	chr12	11323783	11324282	"non-coding (NR_037918, exon 1 of 10)"	"non-coding (NR_037918, exon 1 of 10)"	-190		PRH1	proline-rich protein HaeIII subfamily 1	8.39	19.64	18.99
Merged-chr2-7885185-2	chr2	7884937	7885436	Intergenic	L2c|LINE|L2	-154600	ENSG00000226506	LOC101929551	uncharacterized LOC101929551	5.9	13.98	14.05
Merged-chr4-7651648-2	chr4	7651400	7651899	"intron (NM_020777, intron 4 of 26)"	"intron (NM_020777, intron 4 of 26)"	104168	ENSG00000272620	AFAP1-AS1	AFAP1 antisense RNA 1	3.85	18.64	14.43
Merged-chr16-68096845-2	chr16	68096596	68097095	"intron (NM_017803, intron 8 of 16)"	"intron (NM_017803, intron 8 of 16)"	22424	ENSG00000072736	NFATC3	"nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3"	2.49	11.32	11.01
Merged-chr2-62115851-2	chr2	62115602	62116101	promoter-TSS (NM_001256721)	promoter-TSS (NM_001256721)	45	ENSG00000115484	CCT4	"chaperonin containing TCP1, subunit 4 (delta)"	9.98	21.64	25.82
Merged-chr15-78361192-2	chr15	78360943	78361442	"intron (NM_144572, intron 1 of 12)"	"intron (NM_144572, intron 1 of 12)"	-8802	ENSG00000167202	TBC1D2B	"TBC1 domain family, member 2B"	4.08	12.98	10.25
Merged-chr5-142357340-2	chr5	142357091	142357590	"intron (NM_015071, intron 11 of 22)"	"intron (NM_015071, intron 11 of 22)"	108865	ENSG00000226272	ARHGAP26-AS1	ARHGAP26 antisense RNA 1	3.63	24.3	17.85
Merged-chr20-31957391-2	chr20	31957142	31957641	"intron (NM_001278168, intron 10 of 12)"	"intron (NM_001278168, intron 10 of 12)"	-31984	ENSG00000101391	CDK5RAP1	CDK5 regulatory subunit associated protein 1	2.04	16.64	11.39
Merged-chr22-39513806-2	chr22	39513558	39514057	Intergenic	MER41B|LTR|ERV1	-20578	ENSG00000100298	APOBEC3H	"apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H"	4.31	15.98	20.13
Merged-chr3-33138679-2	chr3	33138431	33138930	promoter-TSS (NM_001135602)	promoter-TSS (NM_001135602)	-14	ENSG00000170266	GLB1	galactosidase beta 1	4.99	14.31	18.61
Merged-chr7-27780043-2	chr7	27779794	27780293	"intron (NM_006024, intron 1 of 16)"	CpG	-329	ENSG00000106052	TAX1BP1	Tax1 (human T-cell leukemia virus type I) binding protein 1	2.49	6.32	7.6
Merged-chr1-2136742-2	chr1	2136494	2136993	"intron (NM_001282670, intron 2 of 7)"	"intron (NM_001282670, intron 2 of 7)"	-2429	ENSG00000162585	FAAP20	Fanconi anemia core complex associated protein 20	5.67	14.31	12.53
Merged-chr16-31376617-2	chr16	31376368	31376867	"intron (NM_000887, intron 14 of 29)"	L1MB7|LINE|L1	-10162	ENSG00000140678	ITGAX	integrin alpha X	3.85	10.98	12.15
Merged-chr9-117150338-2	chr9	117150089	117150588	"intron (NM_030767, intron 1 of 21)"	"intron (NM_030767, intron 1 of 21)"	-6347	ENSG00000106948	AKNA	AT-hook transcription factor	10.2	21.3	22.79
Merged-chr10-88855297-2	chr10	88855049	88855548	promoter-TSS (NM_005271)	promoter-TSS (NM_005271)	-345	ENSG00000122376	FAM35A	"family with sequence similarity 35, member A"	9.75	28.29	28.86
Merged-chr13-111358588-2	chr13	111358340	111358839	promoter-TSS (NM_024537)	promoter-TSS (NM_024537)	109	ENSG00000134905	CARS2	"cysteinyl-tRNA synthetase 2, mitochondrial (putative)"	10.88	28.96	37.98
Merged-chr9-35829210-2	chr9	35828961	35829460	promoter-TSS (NM_001012446)	promoter-TSS (NM_001012446)	12	ENSG00000137103	TMEM8B	transmembrane protein 8B	5.21	13.65	10.63
Merged-chr15-101835267-2	chr15	101835018	101835517	"intron (NM_003090, intron 1 of 8)"	CpG	-193	ENSG00000131876	SNRPA1	small nuclear ribonucleoprotein polypeptide A'	7.03	15.64	18.23
Merged-chr3-48130583-2	chr3	48130335	48130834	"5' UTR (NM_001134364, exon 1 of 18)"	"5' UTR (NM_001134364, exon 1 of 18)"	-185	ENSG00000047849	MAP4	microtubule associated protein 4	19.73	41.27	43.67
Merged-chr15-75918104-2	chr15	75917855	75918354	"5' UTR (NM_005701, exon 1 of 9)"	"5' UTR (NM_005701, exon 1 of 9)"	-342	ENSG00000169371	SNUPN	snurportin 1	9.75	20.64	22.41
Merged-chr14-45553296-2	chr14	45553048	45553547	promoter-TSS (NM_017922)	promoter-TSS (NM_017922)	5	ENSG00000185246	PRPF39	pre-mRNA processing factor 39	11.56	25.3	26.58
Merged-chr1-2162658-2	chr1	2162410	2162909	"intron (NM_003036, intron 1 of 6)"	"intron (NM_003036, intron 1 of 6)"	-2525	ENSG00000157933	SKI	SKI proto-oncogene	5.67	18.31	15.19
Merged-chr6-236143-2	chr6	235895	236394	Intergenic	Intergenic	55913	ENSG00000112679	DUSP22	dual specificity phosphatase 22	4.08	10.98	11.39
Merged-chr15-82555120-2	chr15	82554872	82555371	promoter-TSS (NM_024580)	promoter-TSS (NM_024580)	17	ENSG00000140598	EFTUD1	elongation factor Tu GTP binding domain containing 1	8.16	17.64	19.37
Merged-chr16-12007757-2	chr16	12007508	12008007	"intron (NM_001130007, intron 1 of 14)"	"intron (NM_001130007, intron 1 of 14)"	-2068	ENSG00000103342	GSPT1	G1 to S phase transition 1	4.99	17.31	13.67
Merged-chr12-124086659-2	chr12	124086410	124086909	promoter-TSS (NM_020936)	promoter-TSS (NM_020936)	13	ENSG00000111364	DDX55	DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	9.52	21.3	20.51
Merged-chr17-76813398-2	chr17	76813149	76813648	"intron (NM_025090, intron 10 of 19)"	"intron (NM_025090, intron 10 of 19)"	-23571	ENSG00000055483	USP36	ubiquitin specific peptidase 36	8.62	24.3	18.61
Merged-chr15-66764766-2	chr15	66764517	66765016	"intron (NM_002755, intron 5 of 10)"	MLT1K|LTR|ERVL-MaLR	-25380	ENSG00000174446	SNAPC5	small nuclear RNA activating complex polypeptide 5	4.31	12.98	11.39
Merged-chr1-39456890-2	chr1	39456641	39457140	promoter-TSS (NM_024595)	promoter-TSS (NM_024595)	26	ENSG00000174574	AKIRIN1	akirin 1	7.94	21.64	25.06
Merged-chr6-160390048-2	chr6	160389800	160390299	promoter-TSS (NM_000876)	promoter-TSS (NM_000876)	82		IGF2R	insulin-like growth factor 2 receptor	10.66	21.64	25.82
Merged-chr7-28191722-2	chr7	28191474	28191973	"intron (NM_175061, intron 1 of 4)"	"intron (NM_175061, intron 1 of 4)"	28353		JAZF1-AS1	JAZF1 antisense RNA 1	3.85	16.64	14.43
Merged-chr5-132299411-2	chr5	132299163	132299662	promoter-TSS (NM_014423)	promoter-TSS (NM_014423)	58	ENSG00000072364	AFF4	"AF4/FMR2 family, member 4"	9.52	21.97	23.17
Merged-chr2-73520808-2	chr2	73520560	73521059	promoter-TSS (NM_001965)	promoter-TSS (NM_001965)	-20	ENSG00000135625	EGR4	early growth response 4	9.52	23.63	20.13
Merged-chr1-160726438-2	chr1	160726189	160726688	Intergenic	Intergenic	-17591	ENSG00000026751	SLAMF7	SLAM family member 7	2.49	19.31	12.91
Merged-chr6-36515262-2	chr6	36515013	36515512	promoter-TSS (NM_007271)	promoter-TSS (NM_007271)	15	ENSG00000112079	STK38	serine/threonine kinase 38	10.88	22.63	28.1
Merged-chr16-89907897-2	chr16	89907649	89908148	"intron (NM_032451, intron 1 of 14)"	"intron (NM_032451, intron 1 of 14)"	-12991	ENSG00000204991	SPIRE2	spire-type actin nucleation factor 2	4.53	13.65	16.71
Merged-chr12-68759266-2	chr12	68759018	68759517	Intergenic	Intergenic	33106	ENSG00000111554	MDM1	Mdm1 nuclear protein	8.62	21.97	28.48
Merged-chrX-153744674-2	chrX	153744425	153744924	promoter-TSS (NM_001171132)	promoter-TSS (NM_001171132)	108	ENSG00000071889	FAM3A	"family with sequence similarity 3, member A"	11.79	24.96	26.58
Merged-chr1-118199011-2	chr1	118198762	118199261	Intergenic	MIRb|SINE|MIR	-50407	ENSG00000183508	FAM46C	"family with sequence similarity 46, member C"	11.79	26.3	26.58
Merged-chr10-30722951-2	chr10	30722702	30723201	promoter-TSS (NM_001244134)	promoter-TSS (NM_001244134)	-1	ENSG00000107968	MAP3K8	mitogen-activated protein kinase kinase kinase 8	9.3	25.96	30
Merged-chr18-42309934-2	chr18	42309685	42310184	"intron (NM_001130110, intron 2 of 3)"	"intron (NM_001130110, intron 2 of 3)"	-49071	ENSG00000152217	SETBP1	SET binding protein 1	4.08	19.31	15.57
Merged-chr14-90422584-2	chr14	90422336	90422835	"intron (NM_001008744, intron 1 of 15)"	CpG	-339	ENSG00000042088	TDP1	tyrosyl-DNA phosphodiesterase 1	4.53	11.65	12.53
Merged-chr17-47286541-2	chr17	47286292	47286791	"intron (NM_001198754, intron 1 of 3)"	"intron (NM_001198754, intron 1 of 3)"	-202	ENSG00000167083	GNGT2	"guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2"	4.53	20.3	17.85
Merged-chr10-43951165-2	chr10	43950916	43951415	"intron (NR_026693, intron 1 of 3)"	CpG	-18591		ZNF487	zinc finger protein 487	18.37	41.27	45.95
Merged-chr1-9687338-2	chr1	9687089	9687588	Intergenic	CpG	24452	ENSG00000171608	PIK3CD	"phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta"	15.64	35.28	35.7
Merged-chr8-82633557-2	chr8	82633309	82633808	promoter-TSS (NM_001170797)	promoter-TSS (NM_001170797)	19	ENSG00000104231	ZFAND1	"zinc finger, AN1-type domain 1"	8.39	21.3	18.23
Merged-chr20-50018933-2	chr20	50018685	50019184	"intron (NM_001258296, intron 9 of 10)"	"intron (NM_001258296, intron 9 of 10)"	-50580	ENSG00000266761	MIR3194	microRNA 3194	2.27	14.31	13.67
Merged-chr18-67563442-2	chr18	67563194	67563693	"intron (NM_006566, intron 3 of 6)"	AluY|SINE|Alu	-60789	ENSG00000150637	CD226	CD226 molecule	1.13	4.99	2.66
Merged-chr1-2165973-2	chr1	2165725	2166224	"intron (NM_003036, intron 1 of 6)"	"intron (NM_003036, intron 1 of 6)"	-5840	ENSG00000157933	SKI	SKI proto-oncogene	6.35	25.3	23.55
Merged-chr9-128469536-2	chr9	128469287	128469786	promoter-TSS (NM_024117)	promoter-TSS (NM_024117)	23	ENSG00000119487	MAPKAP1	mitogen-activated protein kinase associated protein 1	12.02	25.3	25.44
Merged-chr17-28691056-2	chr17	28690808	28691307	Intergenic	Intergenic	14885	ENSG00000108582	CPD	carboxypeptidase D	7.48	25.63	18.99
Merged-chr17-3666834-2	chr17	3666586	3667085	"intron (NM_002208, intron 3 of 30)"	"intron (NM_002208, intron 3 of 30)"	-37702	ENSG00000083457	ITGAE	integrin alpha E	3.4	16.31	9.49
Merged-chr11-66095753-2	chr11	66095504	66096003	Intergenic	Intergenic	-8247	ENSG00000174791	RIN1	Ras and Rab interactor 1	7.03	16.98	21.65
Merged-chr2-231742607-2	chr2	231742359	231742858	"intron (NM_001012514, intron 4 of 4)"	"intron (NM_001012514, intron 4 of 4)"	8653	ENSG00000232520	LOC151484	uncharacterized LOC151484	9.3	20.97	18.61
Merged-chrX-70752451-2	chrX	70752203	70752702	promoter-TSS (NM_181672)	promoter-TSS (NM_181672)	460	ENSG00000147162	OGT	O-linked N-acetylglucosamine (GlcNAc) transferase	1.81	6.32	4.56
Merged-chr19-39260596-2	chr19	39260347	39260846	Intergenic	CpG	-3561	ENSG00000205076	LGALS7	"lectin, galactoside-binding, soluble, 7"	5.21	11.32	11.01
Merged-chr9-74979882-2	chr9	74979634	74980133	promoter-TSS (NM_001278243)	promoter-TSS (NM_001278243)	-280	ENSG00000107372	ZFAND5	"zinc finger, AN1-type domain 5"	4.08	8.99	11.39
Merged-chr1-159046719-2	chr1	159046471	159046970	promoter-TSS (NM_004833)	promoter-TSS (NM_004833)	73	ENSG00000163568	AIM2	absent in melanoma 2	4.76	19.64	14.81
Merged-chr3-52322013-2	chr3	52321764	52322263	TTS (NR_046719)	TTS (NR_046719)	-177	ENSG00000168237	GLYCTK	glycerate kinase	7.26	17.64	22.41
Merged-chr5-114505715-2	chr5	114505466	114505965	promoter-TSS (NM_001300759)	promoter-TSS (NM_001300759)	55	ENSG00000152503	TRIM36	tripartite motif containing 36	11.11	23.3	27.34
Merged-chr5-142149911-2	chr5	142149663	142150162	promoter-TSS (NM_001135608)	promoter-TSS (NM_001135608)	380	ENSG00000145819	ARHGAP26	Rho GTPase activating protein 26	14.74	40.61	37.6
Merged-chrX-69509827-2	chrX	69509578	69510077	promoter-TSS (NM_012310)	promoter-TSS (NM_012310)	29	ENSG00000120509	PDZD11	PDZ domain containing 11	2.04	10.98	8.35
Merged-chr19-10677108-2	chr19	10676859	10677358	promoter-TSS (NM_023008)	promoter-TSS (NM_023008)	406	ENSG00000129347	KRI1	KRI1 homolog	6.8	13.98	13.67
Merged-chr18-33647510-2	chr18	33647262	33647761	promoter-TSS (NM_018170)	promoter-TSS (NM_018170)	138	ENSG00000141425	RPRD1A	regulation of nuclear pre-mRNA domain containing 1A	12.47	25.63	25.44
Merged-chr8-56686043-2	chr8	56685795	56686294	promoter-TSS (NM_001286661)	promoter-TSS (NM_001286661)	78	ENSG00000167904	TMEM68	transmembrane protein 68	10.43	26.96	26.2
Merged-chr5-176924697-2	chr5	176924448	176924947	promoter-TSS (NM_213636)	promoter-TSS (NM_213636)	91	ENSG00000196923	PDLIM7	PDZ and LIM domain 7 (enigma)	14.74	31.29	36.46
Merged-chr3-47000911-2	chr3	47000663	47001162	"intron (NM_001277074, intron 1 of 6)"	"intron (NM_001277074, intron 1 of 6)"	-17079	ENSG00000160799	CCDC12	coiled-coil domain containing 12	4.99	14.98	16.33
Merged-chr10-94351501-2	chr10	94351252	94351751	Intergenic	CpG	1324	ENSG00000138160	KIF11	kinesin family member 11	11.11	25.96	27.34
Merged-chr13-52377859-2	chr13	52377610	52378109	"intron (NM_001270424, intron 1 of 9)"	CpG	-439	ENSG00000102796	DHRS12	dehydrogenase/reductase (SDR family) member 12	14.74	33.62	33.04
Merged-chr2-157191041-2	chr2	157190793	157191292	Intergenic	CpG	1755	ENSG00000153234	NR4A2	"nuclear receptor subfamily 4, group A, member 2"	13.6	28.63	33.42
Merged-chr6-137987475-2	chr6	137987227	137987726	Intergenic	Intergenic	-72698	ENSG00000234956	LOC100507406	uncharacterized LOC100507406	1.81	13.31	8.73
Merged-chr2-37851415-2	chr2	37851166	37851665	Intergenic	Intergenic	-47927	ENSG00000163171	CDC42EP3	CDC42 effector protein (Rho GTPase binding) 3	3.17	9.32	8.73
Merged-chr2-11886738-2	chr2	11886489	11886988	promoter-TSS (NM_145693)	promoter-TSS (NM_145693)	-16	ENSG00000134324	LPIN1	lipin 1	7.94	16.98	22.79
Merged-chr5-172483711-2	chr5	172483463	172483962	"intron (NM_001168393, intron 1 of 3)"	CpG	-357	ENSG00000164463	CREBRF	CREB3 regulatory factor	4.08	9.65	8.73
Merged-chr3-194207720-2	chr3	194207472	194207971	promoter-TSS (NR_033929)	promoter-TSS (NR_033929)	148		LINC00884	long intergenic non-protein coding RNA 884	14.74	31.95	37.22
Merged-chr3-184032484-2	chr3	184032235	184032734	promoter-TSS (NM_182917)	promoter-TSS (NM_182917)	-194	ENSG00000114867	EIF4G1	"eukaryotic translation initiation factor 4 gamma, 1"	11.11	25.3	22.79
Merged-chr5-1518991-2	chr5	1518743	1519242	"intron (NM_024830, intron 1 of 13)"	"intron (NM_024830, intron 1 of 13)"	-5084	ENSG00000153395	LPCAT1	lysophosphatidylcholine acyltransferase 1	3.85	20.3	20.51
Merged-chr22-18121480-2	chr22	18121231	18121730	"exon (NM_001270726, exon 1 of 6)"	"exon (NM_001270726, exon 1 of 6)"	-130	ENSG00000099968	BCL2L13	BCL2-like 13 (apoptosis facilitator)	8.62	17.31	24.31
Merged-chr14-92998007-2	chr14	92997759	92998258	"intron (NM_024832, intron 1 of 9)"	"intron (NM_024832, intron 1 of 9)"	-17883	ENSG00000100599	RIN3	Ras and Rab interactor 3	9.98	20.64	23.17
Merged-chr5-162888960-2	chr5	162888711	162889210	"intron (NM_001142557, intron 1 of 14)"	"intron (NM_001142557, intron 1 of 14)"	-1443	ENSG00000072571	HMMR	hyaluronan-mediated motility receptor (RHAMM)	6.35	15.64	14.81
Merged-chr17-2699615-2	chr17	2699366	2699865	promoter-TSS (NM_001100398)	promoter-TSS (NM_001100398)	117	ENSG00000132359	RAP1GAP2	RAP1 GTPase activating protein 2	3.85	14.98	18.61
Merged-chr19-13901324-2	chr19	13901076	13901575	Intergenic	Intergenic	4949	ENSG00000132003	ZSWIM4	"zinc finger, SWIM-type containing 4"	2.95	12.32	14.81
Merged-chr5-171600947-2	chr5	171600698	171601197	"intron (NM_005990, intron 1 of 18)"	MIRb|SINE|MIR	-14399	ENSG00000072786	STK10	serine/threonine kinase 10	7.03	20.97	17.47
Merged-chr1-16767143-2	chr1	16766895	16767394	promoter-TSS (NM_001145277)	promoter-TSS (NM_001145277)	23	ENSG00000157191	NECAP2	NECAP endocytosis associated 2	10.43	22.63	26.58
Merged-chr1-26704994-2	chr1	26704746	26705245	Intergenic	Intergenic	5729	ENSG00000176083	ZNF683	zinc finger protein 683	13.38	29.62	30
Merged-chr6-26172249-2	chr6	26172000	26172499	TTS (NM_138720)	TTS (NM_138720)	11775	ENSG00000274290	HIST1H2BE	"histone cluster 1, H2be"	6.8	19.31	21.27
Merged-chr6-149867242-2	chr6	149866993	149867492	promoter-TSS (NM_139126)	promoter-TSS (NM_139126)	4	ENSG00000131013	PPIL4	peptidylprolyl isomerase (cyclophilin)-like 4	14.51	30.62	37.98
Merged-chr17-66453864-2	chr17	66453615	66454114	promoter-TSS (NM_017983)	promoter-TSS (NM_017983)	211	ENSG00000070540	WIPI1	"WD repeat domain, phosphoinositide interacting 1"	22.9	45.93	51.27
Merged-chr17-1620209-2	chr17	1619961	1620460	promoter-TSS (NR_028504)	promoter-TSS (NR_028504)	-393	ENSG00000167716	WDR81	WD repeat domain 81	2.49	6.66	7.6
Merged-chr16-28996366-2	chr16	28996118	28996617	promoter-TSS (NM_014387)	promoter-TSS (NM_014387)	20	ENSG00000213658	LAT	linker for activation of T-cells	7.03	18.31	18.61
Merged-chr7-5436707-2	chr7	5436458	5436957	"intron (NM_001080495, intron 2 of 29)"	"intron (NM_001080495, intron 2 of 29)"	-26470	ENSG00000182095	TNRC18	trinucleotide repeat containing 18	5.9	15.31	13.29
Merged-chr22-23621294-2	chr22	23621045	23621544	"intron (NM_004327, intron 8 of 22)"	MIRb|SINE|MIR	-16340	ENSG00000230701	FBXW4P1	F-box and WD repeat domain containing 4 pseudogene 1	2.72	16.98	14.81
Merged-chr2-191399197-2	chr2	191398948	191399447	"intron (NM_001142645, intron 1 of 8)"	CpG	-271		NEMP2	nuclear envelope integral membrane protein 2	7.71	19.31	20.13
Merged-chr2-232290906-2	chr2	232290657	232291156	Intergenic	MER77B|LTR|ERVL	-29741	ENSG00000206885	SNORA75	"small nucleolar RNA, H/ACA box 75"	4.53	19.97	20.13
Merged-chr16-25026737-2	chr16	25026489	25026988	promoter-TSS (NM_018054)	promoter-TSS (NM_018054)	39	ENSG00000140750	ARHGAP17	Rho GTPase activating protein 17	9.07	20.97	22.79
Merged-chr20-3776631-2	chr20	3776382	3776881	"5' UTR (NM_021873, exon 1 of 16)"	"5' UTR (NM_021873, exon 1 of 16)"	-245	ENSG00000101224	CDC25B	cell division cycle 25B	7.48	18.64	21.65
Merged-chr8-29348127-2	chr8	29347879	29348378	Intergenic	L3|LINE|CR1	139861	ENSG00000120875	DUSP4	dual specificity phosphatase 4	5.67	21.3	20.89
Merged-chr20-35256616-2	chr20	35256367	35256866	"intron (NM_032214, intron 5 of 7)"	MER5A|DNA|hAT-Charlie	-18003	ENSG00000101082	SLA2	Src-like-adaptor 2	4.08	14.65	10.63
Merged-chr17-75780488-2	chr17	75780239	75780738	Intergenic	Intergenic	55847	ENSG00000267790	LOC100132174	uncharacterized LOC100132174	5.21	19.31	13.67
Merged-chr2-209130971-2	chr2	209130723	209131222	promoter-TSS (NM_001178000)	promoter-TSS (NM_001178000)	19	ENSG00000115020	PIKFYVE	"phosphoinositide kinase, FYVE finger containing"	8.62	22.63	19.75
Merged-chr17-43325165-2	chr17	43324917	43325416	promoter-TSS (NR_110325)	promoter-TSS (NR_110325)	126	ENSG00000267278	MAP3K14-AS1	MAP3K14 antisense RNA 1	12.92	35.95	33.04
Merged-chr17-36003525-2	chr17	36003276	36003775	promoter-TSS (NM_007010)	promoter-TSS (NM_007010)	32	ENSG00000278053	DDX52	DEAD (Asp-Glu-Ala-Asp) box polypeptide 52	8.84	20.3	19.75
Merged-chr2-114514331-2	chr2	114514082	114514581	promoter-TSS (NR_104470)	promoter-TSS (NR_104470)	61	ENSG00000115084	SLC35F5	"solute carrier family 35, member F5"	11.56	27.29	29.62
Merged-chr13-47326145-2	chr13	47325896	47326395	"3' UTR (NM_001164213, exon 19 of 19)"	"3' UTR (NM_001164213, exon 19 of 19)"	-45222	ENSG00000139684	ESD	esterase D	5.67	19.97	18.99
Merged-chr4-83351157-2	chr4	83350908	83351407	promoter-TSS (NM_001292017)	promoter-TSS (NM_001292017)	-221	ENSG00000152795	HNRNPDL	heterogeneous nuclear ribonucleoprotein D like	4.76	10.65	12.91
Merged-chr15-78441648-2	chr15	78441400	78441899	promoter-TSS (NM_005530)	promoter-TSS (NM_005530)	70		IDH3A	isocitrate dehydrogenase 3 (NAD+) alpha	11.56	24.63	30
Merged-chr2-26291657-2	chr2	26291409	26291908	"intron (NM_016131, intron 1 of 5)"	"intron (NM_016131, intron 1 of 5)"	-34929	ENSG00000084733	RAB10	"RAB10, member RAS oncogene family"	4.53	13.65	12.15
Merged-chr10-43932395-2	chr10	43932147	43932646	promoter-TSS (NR_026693)	promoter-TSS (NR_026693)	178		ZNF487	zinc finger protein 487	12.02	26.63	26.58
Merged-chr7-72971607-2	chr7	72971359	72971858	promoter-TSS (NR_036682)	promoter-TSS (NR_036682)	6	ENSG00000106635	BCL7B	B-cell CLL/lymphoma 7B	10.2	20.97	27.34
Merged-chr17-47793035-2	chr17	47792787	47793286	"intron (NM_030802, intron 7 of 7)"	"intron (NM_030802, intron 7 of 7)"	7723	ENSG00000121073	SLC35B1	"solute carrier family 35, member B1"	3.63	11.65	11.01
Merged-chr1-154934135-2	chr1	154933887	154934386	TTS (NM_003029)	TTS (NM_003029)	-122	ENSG00000163348	PYGO2	pygopus family PHD finger 2	9.3	20.64	24.31
Merged-chr11-72853577-2	chr11	72853328	72853827	promoter-TSS (NM_014824)	promoter-TSS (NM_014824)	434	ENSG00000137478	FCHSD2	FCH and double SH3 domains 2	12.24	25.3	29.62
Merged-chr19-18539935-2	chr19	18539686	18540185	"intron (NM_001009998, intron 4 of 16)"	CpG	-8184	ENSG00000105655	ISYNA1	inositol-3-phosphate synthase 1	17	44.6	42.53
Merged-chr6-106094429-2	chr6	106094181	106094680	Intergenic	Intergenic	243431	ENSG00000085377	PREP	prolyl endopeptidase	4.99	24.96	18.99
Merged-chr18-12921466-2	chr18	12921217	12921716	Intergenic	Intergenic	26517	ENSG00000085415	SEH1L	SEH1-like nucleoporin	3.4	15.31	11.01
Merged-chr10-72362621-2	chr10	72362373	72362872	promoter-TSS (NM_005041)	promoter-TSS (NM_005041)	91	ENSG00000180644	PRF1	perforin 1 (pore forming protein)	7.03	17.31	19.75
Merged-chr1-205744342-2	chr1	205744094	205744593	"5' UTR (NM_001135663, exon 1 of 4)"	"5' UTR (NM_001135663, exon 1 of 4)"	-267	ENSG00000117280	RAB29	"RAB29, member RAS oncogene family"	8.62	18.97	20.51
Merged-chr9-134406684-2	chr9	134406436	134406935	promoter-TSS (NM_001135954)	promoter-TSS (NM_001135954)	23	ENSG00000130717	UCK1	uridine-cytidine kinase 1	7.71	18.31	23.17
Merged-chr17-36956317-2	chr17	36956068	36956567	promoter-TSS (NM_003559)	promoter-TSS (NM_003559)	159	ENSG00000276293	PIP4K2B	"phosphatidylinositol-5-phosphate 4-kinase, type II, beta"	8.84	21.64	23.17
Merged-chr3-50365696-2	chr3	50365448	50365947	promoter-TSS (NM_007275)	promoter-TSS (NM_007275)	28	ENSG00000114383	TUSC2	tumor suppressor candidate 2	12.92	25.96	26.2
Merged-chr16-23521807-2	chr16	23521558	23522057	promoter-TSS (NM_015044)	promoter-TSS (NM_015044)	-8	ENSG00000103365	GGA2	"golgi-associated, gamma adaptin ear containing, ARF binding protein 2"	6.12	16.64	15.57
Merged-chr9-134503668-2	chr9	134503420	134503919	"intron (NM_005312, intron 8 of 23)"	"intron (NM_005312, intron 8 of 23)"	-81560	ENSG00000107263	RAPGEF1	Rap guanine nucleotide exchange factor 1	5.9	25.3	20.13
Merged-chr17-8198890-2	chr17	8198641	8199140	promoter-TSS (NM_201520)	promoter-TSS (NM_201520)	720	ENSG00000125434	SLC25A35	"solute carrier family 25, member 35"	14.06	32.95	28.86
Merged-chr11-115375224-2	chr11	115374976	115375475	promoter-TSS (NM_014333)	promoter-TSS (NM_014333)	-16	ENSG00000182985	CADM1	cell adhesion molecule 1	2.04	22.63	17.85
Merged-chr6-36091695-2	chr6	36091446	36091945	Intergenic	Intergenic	6566	ENSG00000156711	MAPK13	mitogen-activated protein kinase 13	5.44	12.65	12.91
Merged-chr6-74132357-2	chr6	74132109	74132608	Intergenic	MLT1E1A|LTR|ERVL-MaLR	-28073	ENSG00000080007	DDX43	DEAD (Asp-Glu-Ala-Asp) box polypeptide 43	6.58	15.31	17.85
Merged-chr8-38089143-2	chr8	38088895	38089394	promoter-TSS (NM_001164232)	promoter-TSS (NM_001164232)	-135	ENSG00000085788	DDHD2	DDHD domain containing 2	11.79	23.63	30.38
Merged-chr17-34394151-2	chr17	34393903	34394402	"intron (NM_002988, intron 1 of 2)"	"intron (NM_002988, intron 1 of 2)"	-2509		CCL18	chemokine (C-C motif) ligand 18	3.17	25.3	20.51
Merged-chr22-42343006-2	chr22	42342757	42343256	"intron (NM_001002876, intron 1 of 4)"	CpG-17906	-142	ENSG00000100162	CENPM	centromere protein M	9.98	24.3	31.14
Merged-chr3-196001650-2	chr3	196001402	196001901	"intron (NM_005017, intron 2 of 9)"	"intron (NM_005017, intron 2 of 9)"	-12933		PCYT1A	"phosphate cytidylyltransferase 1, choline, alpha"	3.85	14.31	12.53
Merged-chr13-50996447-2	chr13	50996199	50996698	"intron (NR_109974, intron 3 of 6)"	MIRb|SINE|MIR	-105137	ENSG00000229323	DLEU1-AS1	DLEU1 antisense RNA 1	2.04	11.32	8.73
Merged-chr14-69248148-2	chr14	69247899	69248398	Intergenic	Intergenic	-12483	ENSG00000185650	ZFP36L1	ZFP36 ring finger protein-like 1	5.21	14.31	12.91
Merged-chr15-43415438-2	chr15	43415189	43415688	Intergenic	Intergenic	10284	ENSG00000137842	TMEM62	transmembrane protein 62	5.67	14.65	19.75
Merged-chr1-33647697-2	chr1	33647449	33647948	promoter-TSS (NM_018207)	promoter-TSS (NM_018207)	27	ENSG00000116525	TRIM62	tripartite motif containing 62	6.12	14.65	14.43
Merged-chr10-81046201-2	chr10	81045953	81046452	"intron (NM_020338, intron 8 of 24)"	"intron (NM_020338, intron 8 of 24)"	61018	ENSG00000108179	PPIF	peptidylprolyl isomerase F	2.95	24.63	15.57
Merged-chr18-19192209-2	chr18	19191960	19192459	promoter-TSS (NM_001291916)	promoter-TSS (NM_001291916)	21		SNRPD1	small nuclear ribonucleoprotein D1 polypeptide	7.48	16.64	17.47
Merged-chr18-51795939-2	chr18	51795690	51796189	promoter-TSS (NM_007195)	promoter-TSS (NM_007195)	-90	ENSG00000101751	POLI	polymerase (DNA directed) iota	11.79	26.3	33.04
Merged-chr14-25103549-2	chr14	25103301	25103800	promoter-TSS (NM_004131)	promoter-TSS (NM_004131)	118	ENSG00000100453	GZMB	granzyme B	2.49	19.97	19.75
Merged-chr17-14206007-2	chr17	14205759	14206258	"intron (NM_006041, intron 1 of 1)"	CpG	1049	ENSG00000266709	MGC12916	uncharacterized protein MGC12916	8.39	17.31	17.09
Merged-chr7-1015003-2	chr7	1014754	1015253	"intron (NM_001031617, intron 1 of 2)"	CpG	-232		COX19	COX19 cytochrome c oxidase assembly factor	10.88	23.3	22.03
Merged-chr3-39309554-2	chr3	39309306	39309805	"intron (NM_001171174, intron 1 of 1)"	"intron (NM_001171174, intron 1 of 1)"	-11972	ENSG00000168329	CX3CR1	chemokine (C-X3-C motif) receptor 1	3.85	22.3	24.31
Merged-chr6-41904154-2	chr6	41903905	41904404	"intron (NM_001287434, intron 4 of 4)"	"intron (NM_001287434, intron 4 of 4)"	-5432	ENSG00000112576	CCND3	cyclin D3	3.85	14.98	12.53
Merged-chr5-142376198-2	chr5	142375950	142376449	"intron (NM_015071, intron 11 of 22)"	"intron (NM_015071, intron 11 of 22)"	127724	ENSG00000226272	ARHGAP26-AS1	ARHGAP26 antisense RNA 1	2.04	13.31	11.39
Merged-chr6-13428585-2	chr6	13428337	13428836	"intron (NM_018988, intron 1 of 1)"	"intron (NM_018988, intron 1 of 1)"	20217	ENSG00000145990	GFOD1	glucose-fructose oxidoreductase domain containing 1	4.53	20.97	19.75
Merged-chr19-6522477-2	chr19	6522229	6522728	Intergenic	Intergenic	8532	ENSG00000125657	TNFSF9	"tumor necrosis factor (ligand) superfamily, member 9"	5.21	26.63	21.65
Merged-chr4-83720067-2	chr4	83719819	83720318	promoter-TSS (NM_024906)	promoter-TSS (NM_024906)	58	ENSG00000145284	SCD5	stearoyl-CoA desaturase 5	3.63	25.3	15.95
Merged-chr16-79312584-2	chr16	79312335	79312834	Intergenic	Intergenic	-322038	ENSG00000178573	MAF	v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog	4.99	18.97	14.81
Merged-chr17-19881227-2	chr17	19880978	19881477	promoter-TSS (NM_007202)	promoter-TSS (NM_007202)	58	ENSG00000108599	AKAP10	A kinase (PRKA) anchor protein 10	7.03	19.64	20.13
Merged-chr13-42614682-2	chr13	42614434	42614933	"intron (NM_001204504, intron 1 of 29)"	CpG	-511	ENSG00000102780	DGKH	"diacylglycerol kinase, eta"	8.39	18.64	22.41
Merged-chr13-100004189-2	chr13	100003941	100004440	TTS (NR_024013)	TTS (NR_024013)	-516		FKSG29	FKSG29	5.44	11.65	12.15
Merged-chr6-109217479-2	chr6	109217231	109217730	"intron (NM_032131, intron 6 of 17)"	"intron (NM_032131, intron 6 of 17)"	-27826		ARMC2-AS1	ARMC2 antisense RNA 1	3.85	12.32	9.87
Merged-chr5-148224379-2	chr5	148224130	148224629	Intergenic	Intergenic	-18223		ADRB2	"adrenoceptor beta 2, surface"	2.95	13.31	13.67
Merged-chr3-48342947-2	chr3	48342698	48343197	promoter-TSS (NM_005793)	promoter-TSS (NM_005793)	99	ENSG00000172113	NME6	NME/NM23 nucleoside diphosphate kinase 6	7.03	17.97	27.34
Merged-chr15-29278535-2	chr15	29278287	29278786	"intron (NM_001130414, intron 1 of 12)"	"intron (NM_001130414, intron 1 of 12)"	-64696	ENSG00000034053	APBA2	"amyloid beta (A4) precursor protein-binding, family A, member 2"	2.95	11.65	9.49
Merged-chr19-10613441-2	chr19	10613193	10613692	promoter-TSS (NM_012289)	promoter-TSS (NM_012289)	-39	ENSG00000079999	KEAP1	kelch-like ECH-associated protein 1	5.44	18.97	22.03
Merged-chr11-68606822-2	chr11	68606573	68607072	"intron (NM_001031847, intron 1 of 18)"	CpG	-2577	ENSG00000110090	CPT1A	carnitine palmitoyltransferase 1A (liver)	14.28	32.29	30.76
Merged-chr8-103876449-2	chr8	103876201	103876700	promoter-TSS (NM_148174)	promoter-TSS (NM_148174)	53	ENSG00000155096	AZIN1	antizyme inhibitor 1	12.47	25.96	29.24
Merged-chr15-94774687-2	chr15	94774438	94774937	Intergenic	CpG	66743	ENSG00000140563	MCTP2	"multiple C2 domains, transmembrane 2"	8.16	25.3	24.31
Merged-chr21-47845284-2	chr21	47845035	47845534	"intron (NM_006031, intron 32 of 46)"	"intron (NM_006031, intron 32 of 46)"	33578	ENSG00000160305	DIP2A	disco-interacting protein 2 homolog A	2.27	9.32	11.39
Merged-chr4-178363512-2	chr4	178363263	178363762	"exon (NM_001171988, exon 1 of 9)"	"exon (NM_001171988, exon 1 of 9)"	-145	ENSG00000038002	AGA	aspartylglucosaminidase	11.11	31.29	29.24
Merged-chr2-38894359-2	chr2	38894110	38894609	"intron (NM_138801, intron 1 of 6)"	"intron (NM_138801, intron 1 of 6)"	-1307	ENSG00000143891	GALM	galactose mutarotase (aldose 1-epimerase)	6.58	22.3	18.61
Merged-chr15-49913084-2	chr15	49912836	49913335	promoter-TSS (NM_152647)	promoter-TSS (NM_152647)	-33	ENSG00000166262	FAM227B	"family with sequence similarity 227, member B"	13.15	31.29	30
Merged-chr14-77423003-2	chr14	77422755	77423254	Intergenic	CpG	-72038	ENSG00000119669	IRF2BPL	interferon regulatory factor 2 binding protein-like	11.11	28.63	25.06
Merged-chr4-8430228-2	chr4	8429980	8430479	"intron (NM_003501, intron 1 of 17)"	CpG	-12223	ENSG00000087008	ACOX3	"acyl-CoA oxidase 3, pristanoyl"	9.52	22.3	23.55
Merged-chr2-242254922-2	chr2	242254673	242255172	promoter-TSS (NM_001282972)	promoter-TSS (NM_001282972)	-193	ENSG00000115677	HDLBP	high density lipoprotein binding protein	16.32	37.28	34.56
Merged-chr6-135819160-2	chr6	135818911	135819410	promoter-TSS (NM_001134830)	promoter-TSS (NM_001134830)	-221	ENSG00000231028	LINC00271	long intergenic non-protein coding RNA 271	6.58	14.31	20.51
Merged-chr19-51308161-2	chr19	51307913	51308412	promoter-TSS (NM_032712)	promoter-TSS (NM_032712)	52	ENSG00000167747	C19orf48	chromosome 19 open reading frame 48	15.64	34.95	34.56
Merged-chr9-117453453-2	chr9	117453205	117453704	Intergenic	Intergenic	9085		LOC100505478	uncharacterized LOC100505478	3.85	12.65	12.15
Merged-chr17-43045800-2	chr17	43045552	43046051	promoter-TSS (NM_006688)	promoter-TSS (NM_006688)	157	ENSG00000131094	C1QL1	"complement component 1, q subcomponent-like 1"	5.9	15.31	18.61
Merged-chr19-8634207-2	chr19	8633958	8634457	"intron (NM_012335, intron 1 of 27)"	"intron (NM_012335, intron 1 of 27)"	-8124	ENSG00000142347	MYO1F	myosin IF	5.21	18.97	16.71
Merged-chr3-4863858-2	chr3	4863609	4864108	"intron (NM_001168272, intron 59 of 60)"	"intron (NM_001168272, intron 59 of 60)"	70584	ENSG00000235947	EGOT	eosinophil granule ontogeny transcript (non-protein coding)	5.44	23.97	19.37
Merged-chr7-130794793-2	chr7	130794544	130795043	promoter-TSS (NM_001145354)	promoter-TSS (NM_001145354)	62	ENSG00000128585	MKLN1	"muskelin 1, intracellular mediator containing kelch motifs"	5.21	14.65	16.33
Merged-chr6-41909611-2	chr6	41909362	41909861	promoter-TSS (NM_001136125)	promoter-TSS (NM_001136125)	25	ENSG00000112576	CCND3	cyclin D3	5.21	17.31	18.23
Merged-chr1-241803723-2	chr1	241803475	241803974	promoter-TSS (NM_014322)	promoter-TSS (NM_014322)	23	ENSG00000054277	OPN3	opsin 3	8.62	21.3	24.68
Merged-chr16-89883117-2	chr16	89882868	89883367	promoter-TSS (NM_000135)	promoter-TSS (NM_000135)	52	ENSG00000187741	FANCA	Fanconi anemia complementation group A	11.34	31.29	26.96
Merged-chr12-95069974-2	chr12	95069726	95070225	Intergenic	Intergenic	25637	ENSG00000057704	TMCC3	transmembrane and coiled-coil domain family 3	4.31	14.31	17.09
Merged-chr7-149321829-2	chr7	149321580	149322079	promoter-TSS (NR_027789)	promoter-TSS (NR_027789)	-52	ENSG00000133624	ZNF767P	"zinc finger family member 767, pseudogene"	9.3	33.29	44.05
Merged-chr18-48406445-2	chr18	48406196	48406695	"intron (NM_001168335, intron 1 of 13)"	"intron (NM_001168335, intron 1 of 13)"	-1013	ENSG00000082212	ME2	"malic enzyme 2, NAD(+)-dependent, mitochondrial"	3.63	16.98	17.47
Merged-chr2-7005909-2	chr2	7005661	7006160	promoter-TSS (NM_207315)	promoter-TSS (NM_207315)	-40	ENSG00000134326	CMPK2	"cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial"	9.75	23.97	20.89
Merged-chr14-24682572-2	chr14	24682323	24682822	TTS (NM_138476)	TTS (NM_138476)	-464	ENSG00000254505	CHMP4A	charged multivesicular body protein 4A	15.19	34.95	34.18
Merged-chr14-75085109-2	chr14	75084861	75085360	Intergenic	Intergenic	6076	ENSG00000119681	LTBP2	latent transforming growth factor beta binding protein 2	7.26	23.97	24.68
Merged-chr2-177796755-2	chr2	177796507	177797006	Intergenic	Intergenic	280666	ENSG00000170144	HNRNPA3	heterogeneous nuclear ribonucleoprotein A3	3.17	14.65	15.95
Merged-chr10-97055171-2	chr10	97054922	97055421	Intergenic	CpG	4266	ENSG00000107438	PDLIM1	PDZ and LIM domain 1	2.04	12.98	14.81
Merged-chr1-15738593-2	chr1	15738345	15738844	"intron (NM_024329, intron 1 of 3)"	"intron (NM_024329, intron 1 of 3)"	-2203	ENSG00000142634	EFHD2	EF-hand domain family member D2	3.17	6.99	12.53
Merged-chr1-180471932-2	chr1	180471684	180472183	promoter-TSS (NM_032360)	promoter-TSS (NM_032360)	-89	ENSG00000230124	ACBD6	acyl-CoA binding domain containing 6	7.94	17.64	20.51
Merged-chr22-23606345-2	chr22	23606097	23606596	"non-coding (NR_033408, exon 1 of 1)"	"non-coding (NR_033408, exon 1 of 1)"	-1392	ENSG00000230701	FBXW4P1	F-box and WD repeat domain containing 4 pseudogene 1	2.27	13.98	14.43
Merged-chr6-7313532-2	chr6	7313283	7313782	promoter-TSS (NM_001292008)	promoter-TSS (NM_001292008)	-15	ENSG00000124783	SSR1	"signal sequence receptor, alpha"	12.7	27.63	34.56
Merged-chr14-31597139-2	chr14	31596891	31597390	"exon (NM_015382, exon 26 of 43)"	"exon (NM_015382, exon 26 of 43)"	-79589	ENSG00000092148	HECTD1	HECT domain containing E3 ubiquitin protein ligase 1	4.08	15.31	15.19
Merged-chr2-87013225-2	chr2	87012977	87013476	"intron (NM_171827, intron 4 of 4)"	"intron (NM_171827, intron 4 of 4)"	-5611	ENSG00000153563	CD8A	CD8a molecule	9.3	22.3	20.89
Merged-chr6-157421498-2	chr6	157421250	157421749	"intron (NM_020732, intron 6 of 19)"	"intron (NM_020732, intron 6 of 19)"	320634	ENSG00000271899	MIR4466	microRNA 4466	3.85	11.65	11.39
Merged-chr5-179921312-2	chr5	179921063	179921562	promoter-TSS (NM_015455)	promoter-TSS (NM_015455)	105	ENSG00000113300	CNOT6	CCR4-NOT transcription complex subunit 6	19.95	40.94	42.53
Merged-chr16-69345159-2	chr16	69344910	69345409	promoter-TSS (NM_013245)	promoter-TSS (NM_013245)	128		VPS4A	vacuolar protein sorting 4 homolog A (S. cerevisiae)	10.88	26.96	25.44
Merged-chr16-2073333-2	chr16	2073084	2073583	Intergenic	Intergenic	3536	ENSG00000065054	SLC9A3R2	"solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2"	11.79	23.63	28.1
Merged-chr6-33172383-2	chr6	33172135	33172634	promoter-TSS (NM_014234).2	promoter-TSS (NM_014234).2	30	ENSG00000204228	HSD17B8	hydroxysteroid (17-beta) dehydrogenase 8	6.12	19.31	15.19
Merged-chr17-1957237-2	chr17	1956988	1957487	Intergenic	CpG	1156	ENSG00000177374	HIC1	hypermethylated in cancer 1	6.8	19.97	23.55
Merged-chr19-4060101-2	chr19	4059853	4060352	"intron (NM_015898, intron 1 of 2)"	CpG	-6714	ENSG00000178951	ZBTB7A	zinc finger and BTB domain containing 7A	1.81	14.65	13.67
Merged-chr2-178977148-2	chr2	178976899	178977398	promoter-TSS (NM_152945)	promoter-TSS (NM_152945)	34	ENSG00000155636	RBM45	RNA binding motif protein 45	8.62	19.31	20.51
Merged-chr17-72322315-2	chr17	72322067	72322566	promoter-TSS (NM_153209)	promoter-TSS (NM_153209)	35	ENSG00000196169	KIF19	kinesin family member 19	3.63	14.65	13.29
Merged-chr1-11121096-2	chr1	11120847	11121346	Intergenic	Intergenic	1005	ENSG00000116649	SRM	spermidine synthase	4.53	13.98	13.67
Merged-chr3-130612841-2	chr3	130612593	130613092	promoter-TSS (NM_014382)	promoter-TSS (NM_014382)	-7	ENSG00000017260	ATP2C1	"ATPase, Ca++ transporting, type 2C, member 1"	12.02	24.63	26.58
Merged-chr1-10270497-2	chr1	10270248	10270747	promoter-TSS (NM_183416)	promoter-TSS (NM_183416)	267	ENSG00000054523	KIF1B	kinesin family member 1B	12.7	30.96	35.32
Merged-chr5-148206013-2	chr5	148205764	148206263	promoter-TSS (NM_000024)	promoter-TSS (NM_000024)	143		ADRB2	"adrenoceptor beta 2, surface"	9.98	26.96	26.58
Merged-chr11-85566075-2	chr11	85565827	85566326	promoter-TSS (NM_001286159)	promoter-TSS (NM_001286159)	68	ENSG00000150676	CCDC83	coiled-coil domain containing 83	12.92	30.29	32.66
Merged-chr7-105449778-2	chr7	105449529	105450028	"intron (NM_152749, intron 2 of 3)"	L1MB1|LINE|L1	-67253	ENSG00000146776	ATXN7L1	ataxin 7-like 1	4.99	17.64	15.95
Merged-chr16-11891247-2	chr16	11890999	11891498	promoter-TSS (NM_014153)	promoter-TSS (NM_014153)	134	ENSG00000122299	ZC3H7A	zinc finger CCCH-type containing 7A	13.38	31.29	32.66
Merged-chr11-115127641-2	chr11	115127392	115127891	"intron (NM_001301043, intron 1 of 11)"	"intron (NM_001301043, intron 1 of 11)"	-247600	ENSG00000182985	CADM1	cell adhesion molecule 1	3.63	11.98	12.15
Merged-chr22-35746936-2	chr22	35746687	35747186	Intergenic	Intergenic	14144	ENSG00000274280	MIR6069	microRNA 6069	7.94	16.31	19.37
Merged-chr19-18527757-2	chr19	18527509	18528008	Intergenic	CpG	2388	ENSG00000130511	SSBP4	single stranded DNA binding protein 4	4.76	16.31	17.47
Merged-chr5-39210206-2	chr5	39209958	39210457	"intron (NM_001243093, intron 1 of 18)"	"intron (NM_001243093, intron 1 of 18)"	-9473	ENSG00000082074	FYB	FYN binding protein	7.94	16.31	15.95
Merged-chr15-42187148-2	chr15	42186900	42187399	promoter-TSS (NM_016642)	promoter-TSS (NM_016642)	874	ENSG00000137877	SPTBN5	"spectrin, beta, non-erythrocytic 5"	13.15	30.29	31.52
Merged-chr21-45432367-2	chr21	45432118	45432617	"5' UTR (NM_003274, exon 1 of 23)"	"5' UTR (NM_003274, exon 1 of 23)"	-161	ENSG00000160218	TRAPPC10	trafficking protein particle complex 10	4.99	14.98	15.19
Merged-chr6-3259170-2	chr6	3258921	3259420	promoter-TSS (NM_001135750)	promoter-TSS (NM_001135750)	-8	ENSG00000180822	PSMG4	"proteasome (prosome, macropain) assembly chaperone 4"	7.48	21.64	24.31
Merged-chr5-131808849-2	chr5	131808600	131809099	"intron (NR_045116, intron 3 of 3)"	"intron (NR_045116, intron 3 of 3)"	-17616	ENSG00000125347	IRF1	interferon regulatory factor 1	6.58	17.31	16.71
Merged-chr1-35325441-2	chr1	35325192	35325691	promoter-TSS (NM_138428)	promoter-TSS (NM_138428)	24	ENSG00000163866	SMIM12	small integral membrane protein 12	8.16	18.97	17.47
Merged-chr15-45879466-2	chr15	45879217	45879716	promoter-TSS (NM_012388)	promoter-TSS (NM_012388)	-49	ENSG00000104164	BLOC1S6	"biogenesis of lysosomal organelles complex-1, subunit 6, pallidin"	8.62	17.64	20.89
Merged-chr11-11643667-2	chr11	11643418	11643917	promoter-TSS (NM_198516)	promoter-TSS (NM_198516)	106	ENSG00000110328	GALNT18	polypeptide N-acetylgalactosaminyltransferase 18	2.95	17.64	17.47
Merged-chr17-2126579-2	chr17	2126331	2126830	"intron (NM_001256827, intron 3 of 11)"	"intron (NM_001256827, intron 3 of 11)"	9392	ENSG00000225084	LOC101927839	uncharacterized LOC101927839	3.4	11.65	12.53
Merged-chrX-46404774-2	chrX	46404526	46405025	promoter-TSS (NR_015378)	promoter-TSS (NR_015378)	-117	ENSG00000251192	ZNF674	zinc finger protein 674	10.66	24.63	23.55
Merged-chr2-86089759-2	chr2	86089510	86090009	"intron (NM_001042437, intron 2 of 6)"	L2b|LINE|L2	-5034	ENSG00000115525	ST3GAL5	"ST3 beta-galactoside alpha-2,3-sialyltransferase 5"	2.27	9.32	13.67
Merged-chr1-45275381-2	chr1	45275133	45275632	"intron (NM_001136537, intron 1 of 7)"	"intron (NM_001136537, intron 1 of 7)"	-1228	ENSG00000222009	BTBD19	BTB (POZ) domain containing 19	9.52	22.3	20.89
Merged-chr1-44412420-2	chr1	44412171	44412670	promoter-TSS (NM_014652)	promoter-TSS (NM_014652)	58	ENSG00000117408	IPO13	importin 13	19.95	45.27	41.39
Merged-chr9-91933618-2	chr9	91933370	91933869	promoter-TSS (NM_001282690)	promoter-TSS (NM_001282690)	147	ENSG00000187742	SECISBP2	SECIS binding protein 2	16.78	39.61	39.88
Merged-chr5-137901162-2	chr5	137900914	137901413	"intron (NM_004134, intron 9 of 16)"	"intron (NM_004134, intron 9 of 16)"	4364	ENSG00000206989	SNORD63	"small nucleolar RNA, C/D box 63"	7.26	21.97	16.33
Merged-chr1-184859815-2	chr1	184859567	184860066	"intron (NM_052966, intron 3 of 13)"	"intron (NM_052966, intron 3 of 13)"	-83902	ENSG00000135842	FAM129A	"family with sequence similarity 129, member A"	2.95	20.97	13.29
Merged-chr7-25990858-2	chr7	25990610	25991109	Intergenic	CpG	1253		MIR148A	microRNA 148a	7.48	16.98	15.95
Merged-chr19-41109938-2	chr19	41109689	41110188	"intron (NM_001042545, intron 1 of 29)"	CpG	-2661	ENSG00000090006	LTBP4	latent transforming growth factor beta binding protein 4	8.84	19.31	18.99
Merged-chr9-117131973-2	chr9	117131724	117132223	"intron (NM_030767, intron 4 of 21)"	HAL1-2a_MD|LINE|L1	-24712	ENSG00000106948	AKNA	AT-hook transcription factor	6.8	21.3	18.61
Merged-chr5-76070502-2	chr5	76070254	76070753	Intergenic	Intergenic	44330	ENSG00000164251	F2RL1	coagulation factor II (thrombin) receptor-like 1	4.53	10.32	10.63
Merged-chr22-45525818-2	chr22	45525569	45526068	Intergenic	Intergenic	-22647		NUP50-AS1	NUP50 antisense RNA 1 (head to head)	1.81	10.32	14.05
Merged-chr1-160807541-2	chr1	160807292	160807791	"intron (NM_001166664, intron 4 of 7)"	"intron (NM_001166664, intron 4 of 7)"	-25151	ENSG00000122223	CD244	"CD244 molecule, natural killer cell receptor 2B4"	6.35	13.65	14.43
Merged-chr9-130545567-2	chr9	130545319	130545818	Intergenic	Intergenic	2544	ENSG00000266070	MIR3960	microRNA 3960	4.31	17.64	18.99
Merged-chr10-75609076-2	chr10	75608828	75609327	"exon (NM_001204492, exon 6 of 21)"	"exon (NM_001204492, exon 6 of 21)"	-25272	ENSG00000148660	CAMK2G	calcium/calmodulin-dependent protein kinase II gamma	8.84	22.97	21.65
Merged-chr2-101925174-2	chr2	101924926	101925425	promoter-TSS (NM_173647)	promoter-TSS (NM_173647)	-3	ENSG00000163162	RNF149	ring finger protein 149	13.83	28.63	34.56
Merged-chr10-7072277-2	chr10	7072028	7072527	Intergenic	Intergenic	-250717	ENSG00000238266	LINC00707	long intergenic non-protein coding RNA 707	3.17	14.98	11.01
Merged-chr12-113646296-2	chr12	113646048	113646547	"intron (NM_138451, intron 1 of 2)"	LTR33A_|LTR|ERVL	-12602	ENSG00000166578	IQCD	IQ motif containing D	4.99	15.64	16.33
Merged-chr19-51898883-2	chr19	51898634	51899133	Intergenic	MIRb|SINE|MIR	5055	ENSG00000262874	C19orf84	chromosome 19 open reading frame 84	3.63	13.31	14.81
Merged-chr12-52960852-2	chr12	52960604	52961103	"exon (NM_175053, exon 9 of 9)"	"exon (NM_175053, exon 9 of 9)"	-6756	ENSG00000170484	KRT74	"keratin 74, type II"	2.04	29.62	28.1
Merged-chr22-24407838-2	chr22	24407590	24408089	promoter-TSS (NM_001199281)	promoter-TSS (NM_001199281)	-19	ENSG00000099991	CABIN1	calcineurin binding protein 1	12.7	28.29	31.14
Merged-chrX-148586847-2	chrX	148586598	148587097	promoter-TSS (NM_000202)	promoter-TSS (NM_000202)	-37	ENSG00000010404	IDS	iduronate 2-sulfatase	6.58	18.31	15.57
Merged-chr2-152685042-2	chr2	152684794	152685293	promoter-TSS (NM_012097)	promoter-TSS (NM_012097)	34		ARL5A	ADP-ribosylation factor like GTPase 5A	14.51	36.28	31.9
Merged-chr19-1021418-2	chr19	1021169	1021668	promoter-TSS (NM_033420)	promoter-TSS (NM_033420)	103	ENSG00000207357	RNU6-2	"RNA, U6 small nuclear 2"	14.74	29.96	30.38
Merged-chr17-36831275-2	chr17	36831026	36831525	promoter-TSS (NM_001130677)	promoter-TSS (NM_001130677)	88	ENSG00000273604	C17orf96	chromosome 17 open reading frame 96	9.75	21.97	22.03
Merged-chr5-58395295-2	chr5	58395047	58395546	"intron (NM_001104631, intron 5 of 14)"	"intron (NM_001104631, intron 5 of 14)"	59957	ENSG00000113448	PDE4D	"phosphodiesterase 4D, cAMP-specific"	4.53	24.63	21.27
Merged-chr9-93894037-2	chr9	93893789	93894288	Intergenic	Intergenic	56624		LOC100129316	uncharacterized LOC100129316	1.81	10.98	12.15
Merged-chr3-159706583-2	chr3	159706334	159706833	promoter-TSS (NM_000882)	promoter-TSS (NM_000882)	40	ENSG00000168811	IL12A	interleukin 12A	6.12	16.98	20.51
Merged-chr10-12408138-2	chr10	12407890	12408389	"intron (NM_020397, intron 1 of 9)"	"intron (NM_020397, intron 1 of 9)"	-16556	ENSG00000183049	CAMK1D	calcium/calmodulin-dependent protein kinase ID	3.85	9.65	9.87
Merged-chr17-17566809-2	chr17	17566561	17567060	Intergenic	Intergenic	17977	ENSG00000108557	RAI1	retinoic acid induced 1	5.44	11.65	14.81
Merged-chr15-67547062-2	chr15	67546814	67547313	promoter-TSS (NM_024666)	promoter-TSS (NM_024666)	-11	ENSG00000103591	AAGAB	alpha- and gamma-adaptin binding protein	13.6	28.29	38.36
Merged-chr5-179105596-2	chr5	179105348	179105847	TTS (NM_001164444)	TTS (NM_001164444)	-2378	ENSG00000204659	CBY3	chibby homolog 3 (Drosophila)	13.15	28.96	28.1
Merged-chr4-78508245-2	chr4	78507997	78508496	"intron (NM_006419, intron 1 of 4)"	"intron (NM_006419, intron 1 of 4)"	-75339	ENSG00000156234	CXCL13	chemokine (C-X-C motif) ligand 13	2.95	18.31	16.33
Merged-chr10-3847115-2	chr10	3846866	3847365	Intergenic	MamRep434|DNA|TcMar-Tigger	19642	ENSG00000067082	KLF6	Kruppel-like factor 6	2.49	5.99	6.84
Merged-chr5-142388855-2	chr5	142388607	142389106	"intron (NM_015071, intron 11 of 22)"	(CAT)n|Simple_repeat|Simple_repeat	140381	ENSG00000226272	ARHGAP26-AS1	ARHGAP26 antisense RNA 1	8.39	33.29	28.48
Merged-chr17-3699885-2	chr17	3699636	3700135	"intron (NM_002208, intron 1 of 30)"	"intron (NM_002208, intron 1 of 30)"	-4652	ENSG00000083457	ITGAE	integrin alpha E	7.26	33.29	25.44
Merged-chr8-134080900-2	chr8	134080652	134081151	"intron (NM_001282964, intron 1 of 6)"	"intron (NM_001282964, intron 1 of 6)"	8298	ENSG00000155926	SLA	Src-like-adaptor	9.3	27.63	18.61
Merged-chr19-531360-2	chr19	531111	531610	promoter-TSS (NM_004359)	promoter-TSS (NM_004359)	373	ENSG00000099804	CDC34	cell division cycle 34	6.12	15.64	17.47
Merged-chr12-3862178-2	chr12	3861929	3862428	"intron (NM_032680, intron 1 of 10)"	CpG	-188	ENSG00000130038	CRACR2A	calcium release activated channel regulator 2A	10.43	25.3	26.2
Merged-chr12-105501474-2	chr12	105501226	105501725	promoter-TSS (NM_015275)	promoter-TSS (NM_015275)	17	ENSG00000136051	KIAA1033	KIAA1033	13.38	30.62	33.04
Merged-chr7-23145367-2	chr7	23145119	23145618	promoter-TSS (NM_018846)	promoter-TSS (NM_018846)	-15	ENSG00000122550	KLHL7	kelch-like family member 7	12.02	25.3	27.72
Merged-chr1-948834-2	chr1	948586	949085	promoter-TSS (NM_005101)	promoter-TSS (NM_005101)	12	ENSG00000187608	ISG15	ISG15 ubiquitin-like modifier	10.2	27.29	24.31
Merged-chr2-95787760-2	chr2	95787511	95788010	promoter-TSS (NM_031902)	promoter-TSS (NM_031902)	6	ENSG00000144029	MRPS5	mitochondrial ribosomal protein S5	4.31	15.98	17.09
Merged-chr2-101179496-2	chr2	101179248	101179747	promoter-TSS (NM_024065)	promoter-TSS (NM_024065)	-79		PDCL3	phosducin like 3	17.69	42.27	36.46
Merged-chr1-206808801-2	chr1	206808553	206809052	promoter-TSS (NM_003582)	promoter-TSS (NM_003582)	79	ENSG00000143479	DYRK3	dual specificity tyrosine-(Y)-phosphorylation regulated kinase 3	11.11	25.3	23.93
Merged-chr1-228401338-2	chr1	228401090	228401589	promoter-TSS (NR_073155)	promoter-TSS (NR_073155)	-17	ENSG00000162913	C1orf145	chromosome 1 open reading frame 145	5.67	13.31	15.57
Merged-chr17-38497658-2	chr17	38497409	38497908	promoter-TSS (NM_001024809)	promoter-TSS (NM_001024809)	613	ENSG00000131759	RARA	"retinoic acid receptor, alpha"	11.34	28.29	32.28
Merged-chr10-80785189-2	chr10	80784941	80785440	"intron (NR_015429, intron 3 of 7)"	"intron (NR_015429, intron 3 of 7)"	-42015	ENSG00000224596	ZMIZ1-AS1	ZMIZ1 antisense RNA 1	5.9	17.31	14.05
Merged-chr17-40419048-2	chr17	40418799	40419298	"intron (NM_012448, intron 1 of 18)"	Tigger3b|DNA|TcMar-Tigger	-9376	ENSG00000173757	STAT5B	signal transducer and activator of transcription 5B	2.72	17.64	16.33
Merged-chr1-151119191-2	chr1	151118942	151119441	promoter-TSS (NM_030913)	promoter-TSS (NM_030913)	51	ENSG00000143434	SEMA6C	"sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C"	12.24	24.96	26.96
Merged-chr1-17231376-2	chr1	17231128	17231627	Intergenic	CpG	17068	ENSG00000058453	CROCC	"ciliary rootlet coiled-coil, rootletin"	7.26	18.31	16.71
Merged-chr13-30881608-2	chr13	30881359	30881858	promoter-TSS (NM_032116)	promoter-TSS (NM_032116)	-16	ENSG00000102781	KATNAL1	katanin p60 subunit A-like 1	4.53	13.98	14.05
Merged-chr19-37064025-2	chr19	37063776	37064275	promoter-TSS (NR_110704)	promoter-TSS (NR_110704)	-53	ENSG00000233527	ZNF529-AS1	ZNF529 antisense RNA 1	11.34	29.29	26.96
Merged-chr20-50021411-2	chr20	50021162	50021661	"intron (NM_001258296, intron 9 of 10)"	"intron (NM_001258296, intron 9 of 10)"	-48103	ENSG00000266761	MIR3194	microRNA 3194	7.71	34.28	26.96
Merged-chr14-64319863-2	chr14	64319615	64320114	"intron (NM_182914, intron 1 of 115)"	CpG	-181	ENSG00000054654	SYNE2	"spectrin repeat containing, nuclear envelope 2"	6.8	13.65	17.85
Merged-chr15-49268097-2	chr15	49267848	49268347	Intergenic	CpG	12456	ENSG00000185634	SHC4	"SHC (Src homology 2 domain containing) family, member 4"	4.31	9.65	11.39
Merged-chr3-196045198-2	chr3	196044949	196045448	promoter-TSS (NM_152773)	promoter-TSS (NM_152773)	5	ENSG00000235897	TM4SF19-AS1	TM4SF19 antisense RNA 1	9.75	20.97	27.72
Merged-chr19-16683322-2	chr19	16683073	16683572	promoter-TSS (NM_024881)	promoter-TSS (NM_024881)	129	ENSG00000127526	SLC35E1	"solute carrier family 35, member E1"	10.43	27.63	23.17
Merged-chr6-32163573-2	chr6	32163325	32163824	promoter-TSS (NM_022107).6	promoter-TSS (NM_022107).6	274	ENSG00000213654	GPSM3	G-protein signaling modulator 3	32.2	67.57	64.94
Merged-chr6-3849448-2	chr6	3849200	3849699	promoter-TSS (NM_012135)	promoter-TSS (NM_012135)	183	ENSG00000145945	FAM50B	"family with sequence similarity 50, member B"	7.48	18.97	24.31
Merged-chr11-75946459-2	chr11	75946211	75946710	Intergenic	CpG	28886	ENSG00000085741	WNT11	"wingless-type MMTV integration site family, member 11"	7.94	19.97	17.85
Merged-chr11-18417803-2	chr11	18417555	18418054	promoter-TSS (NM_001165414)	promoter-TSS (NM_001165414)	9	ENSG00000134333	LDHA	lactate dehydrogenase A	13.83	30.29	29.24
Merged-chr6-33378410-2	chr6	33378161	33378660	promoter-TSS (NM_024165)	promoter-TSS (NM_024165)	363	ENSG00000112511	PHF1	PHD finger protein 1	19.27	42.61	39.12
Merged-chr16-66968286-2	chr16	66968038	66968537	promoter-TSS (NR_046109)	promoter-TSS (NR_046109)	-39	ENSG00000166595	FAM96B	"family with sequence similarity 96, member B"	11.79	24.63	25.82
Merged-chr14-31889857-2	chr14	31889609	31890108	promoter-TSS (NM_015473)	promoter-TSS (NM_015473)	70	ENSG00000129493	HEATR5A	HEAT repeat containing 5A	10.43	29.29	31.14
Merged-chr1-225642675-2	chr1	225642427	225642926	Intergenic	Intergenic	26119	ENSG00000143815	LBR	lamin B receptor	2.72	17.97	17.85
Merged-chr2-242785083-2	chr2	242784834	242785333	Intergenic	L1MB3|LINE|L1	-15975	ENSG00000188389	PDCD1	programmed cell death 1	3.4	15.31	15.19
Merged-chr2-196515109-2	chr2	196514860	196515359	Intergenic	Intergenic	6423	ENSG00000196950	SLC39A10	"solute carrier family 39 (zinc transporter), member 10"	2.49	9.99	9.49
Merged-chr16-4674637-2	chr16	4674389	4674888	promoter-TSS (NM_001142291)	promoter-TSS (NM_001142291)	187	ENSG00000102858	MGRN1	"mahogunin ring finger 1, E3 ubiquitin protein ligase"	12.24	25.96	26.58
Merged-chr3-183146491-2	chr3	183146242	183146741	promoter-TSS (NM_015078)	promoter-TSS (NM_015078)	434	ENSG00000053524	MCF2L2	MCF.2 cell line derived transforming sequence-like 2	5.9	15.31	13.67
Merged-chr19-36135421-2	chr19	36135172	36135671	"intron (NM_001300974, intron 5 of 5)"	CpG-13521	-2782	ENSG00000105672	ETV2	ets variant 2	9.3	29.62	26.96
Merged-chr3-5048588-2	chr3	5048339	5048838	Intergenic	Intergenic	-27491	ENSG00000134107	BHLHE40	"basic helix-loop-helix family, member e40"	2.27	10.65	10.63
Merged-chrX-47479397-2	chrX	47479149	47479648	promoter-TSS (NM_133499)	promoter-TSS (NM_133499)	142	ENSG00000008056	SYN1	synapsin I	7.71	16.31	17.85
Merged-chr3-47029376-2	chr3	47029128	47029627	"intron (NM_015175, intron 1 of 53)"	"intron (NM_015175, intron 1 of 53)"	5877	ENSG00000160799	CCDC12	coiled-coil domain containing 12	7.03	17.31	18.99
Merged-chr7-130873598-2	chr7	130873350	130873849	"intron (NM_001145354, intron 2 of 18)"	"intron (NM_001145354, intron 2 of 18)"	-78744	ENSG00000128585	MKLN1	"muskelin 1, intracellular mediator containing kelch motifs"	6.58	17.64	14.81
Merged-chr1-25291674-2	chr1	25291426	25291925	promoter-TSS (NM_001031680)	promoter-TSS (NM_001031680)	174	ENSG00000020633	RUNX3	runt-related transcription factor 3	13.38	35.28	26.96
Merged-chr16-30107604-2	chr16	30107356	30107855	promoter-TSS (NM_031477)	promoter-TSS (NM_031477)	68	ENSG00000090238	YPEL3	yippee like 3	8.39	17.31	19.37
Merged-chr19-48246999-2	chr19	48246751	48247250	TTS (NM_014601)	TTS (NM_014601)	1793	ENSG00000105373	GLTSCR2	glioma tumor suppressor candidate region gene 2	5.67	12.65	14.81
Merged-chr10-126377646-2	chr10	126377398	126377897	"intron (NM_014661, intron 3 of 4)"	"intron (NM_014661, intron 3 of 4)"	14950		FAM53B-AS1	FAM53B antisense RNA 1	2.72	21.97	15.95
Merged-chr16-23690146-2	chr16	23689897	23690396	promoter-TSS (NM_005030)	promoter-TSS (NM_005030)	55	ENSG00000166851	PLK1	polo-like kinase 1	3.63	13.65	11.01
Merged-chr17-1303600-2	chr17	1303351	1303850	promoter-TSS (NM_006761)	promoter-TSS (NM_006761)	44	ENSG00000108953	YWHAE	"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon"	13.15	26.96	28.1
Merged-chr14-92506445-2	chr14	92506197	92506696	promoter-TSS (NM_004239)	promoter-TSS (NM_004239)	43	ENSG00000100815	TRIP11	thyroid hormone receptor interactor 11	9.52	21.3	21.27
Merged-chr10-3977549-2	chr10	3977301	3977800	Intergenic	Intergenic	55802	ENSG00000274809	MIR6078	microRNA 6078	3.85	9.99	12.15
Merged-chr6-31763766-2	chr6	31763518	31764017	promoter-TSS (NM_006295).2	promoter-TSS (NM_006295).2	55	ENSG00000204394	VARS	valyl-tRNA synthetase	7.26	19.97	23.93
Merged-chr17-5342511-2	chr17	5342262	5342761	promoter-TSS (NM_001212)	promoter-TSS (NM_001212)	40	ENSG00000108561	C1QBP	"complement component 1, q subcomponent binding protein"	14.28	34.95	34.18
Merged-chr1-43855538-2	chr1	43855289	43855788	promoter-TSS (NM_052877)	promoter-TSS (NM_052877)	18	ENSG00000198198	SZT2	seizure threshold 2 homolog (mouse)	7.94	19.97	18.23
Merged-chr16-88770094-2	chr16	88769846	88770345	promoter-TSS (NM_001171816)	promoter-TSS (NM_001171816)	70	ENSG00000158717	RNF166	ring finger protein 166	8.16	16.64	22.03
Merged-chr10-70287296-2	chr10	70287047	70287546	promoter-TSS (NM_152707)	promoter-TSS (NM_152707)	16		SLC25A16	"solute carrier family 25 (mitochondrial carrier), member 16"	12.24	24.63	27.72
Merged-chr20-2633169-2	chr20	2632921	2633420	promoter-TSS (NR_027700)	promoter-TSS (NR_027700)	8	ENSG00000101361	NOP56	NOP56 ribonucleoprotein	15.64	32.29	35.7
Merged-chr10-8095493-2	chr10	8095245	8095744	promoter-TSS (NR_104327)	promoter-TSS (NR_104327)	47	ENSG00000197308	GATA3-AS1	GATA3 antisense RNA 1	8.39	26.3	23.55
Merged-chr20-25371611-2	chr20	25371363	25371862	promoter-TSS (NM_015600)	promoter-TSS (NM_015600)	-6	ENSG00000100997	ABHD12	abhydrolase domain containing 12	15.87	36.28	36.46
Merged-chr6-32653583-2	chr6	32653335	32653834	Intergenic	Intergenic	19118	ENSG00000179344	HLA-DQB1	"major histocompatibility complex, class II, DQ beta 1"	4.76	15.98	13.29
Merged-chr16-56763993-2	chr16	56763745	56764244	promoter-TSS (NM_014669)	promoter-TSS (NM_014669)	23	ENSG00000102900	NUP93	nucleoporin 93kDa	11.34	23.63	25.06
Merged-chr1-225648607-2	chr1	225648358	225648857	Intergenic	Intergenic	32050	ENSG00000143815	LBR	lamin B receptor	4.53	18.31	19.75
Merged-chr1-150241477-2	chr1	150241229	150241728	"non-coding (NR_045034, exon 1 of 4)"	"non-coding (NR_045034, exon 1 of 4)"	-131	ENSG00000117362	APH1A	APH1A gamma secretase subunit	5.9	16.98	17.47
Merged-chr6-3068944-2	chr6	3068695	3069194	Intergenic	CpG	8114	ENSG00000137275	RIPK1	receptor (TNFRSF)-interacting serine-threonine kinase 1	8.84	23.97	22.41
Merged-chr1-53308420-2	chr1	53308171	53308670	"5' UTR (NM_001004339, exon 1 of 14)"	"5' UTR (NM_001004339, exon 1 of 14)"	-237	ENSG00000203995	ZYG11A	"zyg-11 family member A, cell cycle regulator"	2.95	10.65	10.25
Merged-chr22-22121613-2	chr22	22121364	22121863	"intron (NM_002745, intron 8 of 8)"	"intron (NM_002745, intron 8 of 8)"	31542	ENSG00000100027	YPEL1	yippee like 1	3.85	24.3	22.41
Merged-chr14-53684353-2	chr14	53684104	53684603	Intergenic	LTR12C|LTR|ERV1	-64281	ENSG00000258731	LOC101927620	uncharacterized LOC101927620	2.04	10.32	10.25
Merged-chr19-49122642-2	chr19	49122394	49122893	promoter-TSS (NM_020126)	promoter-TSS (NM_020126)	-32	ENSG00000063177	RPL18	ribosomal protein L18	23.35	46.93	47.47
Merged-chr1-36554430-2	chr1	36554182	36554681	promoter-TSS (NM_017825)	promoter-TSS (NM_017825)	22	ENSG00000116863	ADPRHL2	ADP-ribosylhydrolase like 2	12.24	25.63	26.58
Merged-chr12-109250406-2	chr12	109250158	109250657	"intron (NM_001161330, intron 1 of 13)"	"intron (NM_001161330, intron 1 of 13)"	-952	ENSG00000084112	SSH1	slingshot protein phosphatase 1	4.99	15.98	18.23
Merged-chr14-50154947-2	chr14	50154699	50155198	"5' UTR (NM_001197331, exon 1 of 17)"	"5' UTR (NM_001197331, exon 1 of 17)"	-150	ENSG00000100479	POLE2	"polymerase (DNA directed), epsilon 2, accessory subunit"	6.12	14.31	16.33
Merged-chr19-14800776-2	chr19	14800528	14801027	promoter-TSS (NM_032433)	promoter-TSS (NM_032433)	75	ENSG00000160961	ZNF333	zinc finger protein 333	9.98	20.3	21.65
Merged-chr6-43021606-2	chr6	43021357	43021856	promoter-TSS (NM_001168370)	promoter-TSS (NM_001168370)	-77	ENSG00000044090	CUL7	cullin 7	12.7	27.96	28.48
Merged-chr3-5020901-2	chr3	5020653	5021152	promoter-TSS (NM_003670)	promoter-TSS (NM_003670)	195	ENSG00000134107	BHLHE40	"basic helix-loop-helix family, member e40"	4.99	22.97	15.95
Merged-chr12-96635838-2	chr12	96635589	96636088	"intron (NM_005230, intron 2 of 4)"	"intron (NM_005230, intron 2 of 4)"	-47631	ENSG00000111145	ELK3	"ELK3, ETS-domain protein (SRF accessory protein 2)"	7.03	16.31	14.81
Merged-chr11-9595057-2	chr11	9594809	9595308	promoter-TSS (NM_003390)	promoter-TSS (NM_003390)	170	ENSG00000166483	WEE1	WEE1 G2 checkpoint kinase	14.06	37.28	36.46
Merged-chr11-122940058-2	chr11	122939810	122940309	Intergenic	MIRb|SINE|MIR	7016	ENSG00000109971	HSPA8	heat shock 70kDa protein 8	2.95	7.66	8.35
Merged-chr7-2445847-2	chr7	2445598	2446097	"intron (NM_018641, intron 1 of 1)"	"intron (NM_018641, intron 1 of 1)"	-2652	ENSG00000136213	CHST12	carbohydrate (chondroitin 4) sulfotransferase 12	2.72	11.32	9.49
Merged-chr19-54369616-2	chr19	54369368	54369867	"5' UTR (NM_001020820, exon 1 of 3)"	"5' UTR (NM_001020820, exon 1 of 3)"	-205	ENSG00000179820	MYADM	myeloid-associated differentiation marker	5.9	24.63	19.75
Merged-chr7-12297468-2	chr7	12297220	12297719	Intergenic	L2|LINE|L2	-46621		TMEM106B	transmembrane protein 106B	4.53	12.98	12.53
Merged-chr1-207098851-2	chr1	207098603	207099102	Intergenic	MIRb|SINE|MIR	3474		FCMR	Fc fragment of IgM receptor	6.8	13.65	13.67
Merged-chr3-196466710-2	chr3	196466461	196466960	promoter-TSS (NM_002577)	promoter-TSS (NM_002577)	18	ENSG00000180370	PAK2	p21 protein (Cdc42/Rac)-activated kinase 2	14.51	32.29	32.28
Merged-chr8-53627055-2	chr8	53626807	53627306	promoter-TSS (NM_014781)	promoter-TSS (NM_014781)	30	ENSG00000023287	RB1CC1	RB1-inducible coiled-coil 1	13.15	29.29	27.72
Merged-chr17-72734519-2	chr17	72734271	72734770	"intron (NM_001163990, intron 1 of 7)"	"intron (NM_001163990, intron 1 of 7)"	-1164	ENSG00000172794	RAB37	"RAB37, member RAS oncogene family"	6.12	18.31	16.71
Merged-chr11-111797816-2	chr11	111797567	111798066	promoter-TSS (NM_001278542)	promoter-TSS (NM_001278542)	52	ENSG00000150764	DIXDC1	DIX domain containing 1	14.74	30.96	31.14
Merged-chr1-11710581-2	chr1	11710332	11710831	"exon (NM_012168, exon 2 of 6)"	"exon (NM_012168, exon 2 of 6)"	3851	ENSG00000132879	FBXO44	F-box protein 44	5.67	18.97	29.24
Merged-chr3-50605171-2	chr3	50604923	50605422	promoter-TSS (NM_016210)	promoter-TSS (NM_016210)	-51	ENSG00000088543	C3orf18	chromosome 3 open reading frame 18	14.06	31.29	33.8
Merged-chr8-146052781-2	chr8	146052532	146053031	promoter-TSS (NM_003416)	promoter-TSS (NM_003416)	122	ENSG00000147789	ZNF7	zinc finger protein 7	21.77	45.93	45.19
Merged-chr12-54411819-2	chr12	54411570	54412069	"intron (NM_014620, intron 1 of 3)"	CpG	-1183	ENSG00000172789	HOXC5	homeobox C5	4.08	16.98	16.33
Merged-chr3-141208254-2	chr3	141208006	141208505	"intron (NM_006506, intron 1 of 23)"	"intron (NM_006506, intron 1 of 23)"	-2329	ENSG00000155903	RASA2	RAS p21 protein activator 2	3.85	13.31	10.25
Merged-chr15-75182364-2	chr15	75182115	75182614	promoter-TSS (NM_001289156)	promoter-TSS (NM_001289156)	-12	ENSG00000178802	MPI	mannose phosphate isomerase	7.48	18.64	17.85
Merged-chr9-123476890-2	chr9	123476641	123477140	promoter-TSS (NM_001080497)	promoter-TSS (NM_001080497)	125	ENSG00000106780	MEGF9	multiple EGF-like-domains 9	18.14	40.94	47.47
Merged-chr12-53765150-2	chr12	53764901	53765400	Intergenic	Intergenic	8829	ENSG00000185591	SP1	Sp1 transcription factor	8.39	18.31	20.89
Merged-chr1-227954135-2	chr1	227953887	227954386	"intron (NM_053052, intron 3 of 4)"	"intron (NM_053052, intron 3 of 4)"	31024	ENSG00000081692	JMJD4	jumonji domain containing 4	10.88	23.3	23.55
Merged-chr19-30113312-2	chr19	30113064	30113563	Intergenic	Intergenic	-16143	ENSG00000105171	POP4	"POP4 homolog, ribonuclease P/MRP subunit"	2.49	13.31	12.15
Merged-chr5-140998711-2	chr5	140998462	140998961	promoter-TSS (NM_001079812)	promoter-TSS (NM_001079812)	89	ENSG00000131504	DIAPH1	diaphanous-related formin 1	18.14	36.61	36.84
Merged-chr7-25902109-2	chr7	25901860	25902359	Intergenic	Intergenic	21479	ENSG00000207113	RNU6-16P	"RNA, U6 small nuclear 16, pseudogene"	2.95	31.95	20.13
Merged-chr8-38126733-2	chr8	38126484	38126983	promoter-TSS (NM_032483)	promoter-TSS (NM_032483)	-5	ENSG00000147535	PLPP5	phospholipid phosphatase 5	7.71	20.3	20.13
Merged-chr7-65216008-2	chr7	65215759	65216258	promoter-TSS (NR_003110)	promoter-TSS (NR_003110)	84		CCT6P1	"chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1"	12.24	24.96	29.62
Merged-chr7-2457909-2	chr7	2457660	2458159	"intron (NM_018641, intron 1 of 1)"	"intron (NM_018641, intron 1 of 1)"	-14714	ENSG00000136213	CHST12	carbohydrate (chondroitin 4) sulfotransferase 12	3.85	19.97	16.71
Merged-chr17-79269112-2	chr17	79268864	79269363	promoter-TSS (NM_001037984)	promoter-TSS (NM_001037984)	-26	ENSG00000157637	SLC38A10	"solute carrier family 38, member 10"	10.43	23.3	22.41
Merged-chr3-59035807-2	chr3	59035559	59036058	promoter-TSS (NM_198463)	promoter-TSS (NM_198463)	93	ENSG00000163689	C3orf67	chromosome 3 open reading frame 67	7.94	20.3	18.23
Merged-chr5-75700539-2	chr5	75700291	75700790	"intron (NM_006633, intron 1 of 35)"	"intron (NM_006633, intron 1 of 35)"	-1460	ENSG00000145703	IQGAP2	IQ motif containing GTPase activating protein 2	5.9	12.98	12.15
Merged-chr6-35656805-2	chr6	35656557	35657056	promoter-TSS (NM_004117)	promoter-TSS (NM_004117)	87	ENSG00000096060	FKBP5	FK506 binding protein 5	5.21	16.98	19.75
Merged-chr14-50466023-2	chr14	50465775	50466274	"intron (NM_001012706, intron 1 of 3)"	"intron (NM_001012706, intron 1 of 3)"	-8214	ENSG00000214900	LINC01588	long intergenic non-protein coding RNA 1588	4.53	15.98	14.43
Merged-chr4-147096904-2	chr4	147096655	147097154	promoter-TSS (NM_007080)	promoter-TSS (NM_007080)	-69	ENSG00000164167	LSM6	"LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated"	7.03	22.3	17.85
Merged-chr12-57611153-2	chr12	57610904	57611403	"intron (NM_007224, intron 1 of 1)"	CpG	-575	ENSG00000182379	NXPH4	neurexophilin 4	3.85	13.98	12.91
Merged-chr20-37502012-2	chr20	37501763	37502262	"intron (NM_015568, intron 2 of 10)"	"intron (NM_015568, intron 2 of 10)"	52943	ENSG00000101447	FAM83D	"family with sequence similarity 83, member D"	6.58	25.96	23.93
Merged-chr12-104850608-2	chr12	104850360	104850859	promoter-TSS (NM_001173982)	promoter-TSS (NM_001173982)	83	ENSG00000171310	CHST11	carbohydrate (chondroitin 4) sulfotransferase 11	4.76	13.65	15.57
Merged-chr11-67397814-2	chr11	67397566	67398065	promoter-TSS (NM_001243750)	promoter-TSS (NM_001243750)	407	ENSG00000167799	NUDT8	nudix hydrolase 8	7.26	18.64	22.41
Merged-chr9-272665-2	chr9	272417	272916	promoter-TSS (NM_001190458)	promoter-TSS (NM_001190458)	382	ENSG00000107099	DOCK8	dedicator of cytokinesis 8	2.27	9.99	8.73
Merged-chr2-238341589-2	chr2	238341340	238341839	Intergenic	Intergenic	18739	ENSG00000163359	COL6A3	"collagen, type VI, alpha 3"	5.9	13.31	16.33
Merged-chr16-20752958-2	chr16	20752709	20753208	"exon (NM_017736, exon 1 of 4)"	"exon (NM_017736, exon 1 of 4)"	-241	ENSG00000066654	THUMPD1	THUMP domain containing 1	9.75	21.3	20.89
Merged-chr3-44903352-2	chr3	44903103	44903602	promoter-TSS (NM_144638)	promoter-TSS (NM_144638)	28	ENSG00000207783	MIR564	microRNA 564	11.11	26.63	25.82
Merged-chr5-76029029-2	chr5	76028781	76029280	"exon (NM_001992, exon 2 of 2)"	"exon (NM_001992, exon 2 of 2)"	-17162	ENSG00000181104	F2R	coagulation factor II (thrombin) receptor	4.53	25.3	25.82
Merged-chr2-162165006-2	chr2	162164758	162165257	"5' UTR (NM_005805, exon 1 of 12)"	"5' UTR (NM_005805, exon 1 of 12)"	-221	ENSG00000115233	PSMD14	"proteasome 26S subunit, non-ATPase 14"	12.47	28.63	26.58
Merged-chr10-115439600-2	chr10	115439352	115439851	"exon (NM_001267057, exon 1 of 7)"	"exon (NM_001267057, exon 1 of 7)"	-173	ENSG00000165806	CASP7	caspase 7	8.62	21.3	22.03
Merged-chr8-66754426-2	chr8	66754177	66754676	promoter-TSS (NM_001242318)	promoter-TSS (NM_001242318)	457		PDE7A	phosphodiesterase 7A	10.88	31.29	28.86
Merged-chr9-128024040-2	chr9	128023791	128024290	promoter-TSS (NM_001282680)	promoter-TSS (NM_001282680)	33	ENSG00000165219	GAPVD1	GTPase activating protein and VPS9 domains 1	7.48	18.97	22.41
Merged-chr16-10479848-2	chr16	10479599	10480098	promoter-TSS (NR_045816)	promoter-TSS (NR_045816)	64	ENSG00000166669	ATF7IP2	activating transcription factor 7 interacting protein 2	4.99	14.31	12.15
Merged-chr16-2955807-2	chr16	2955558	2956057	Intergenic	Intergenic	6173	ENSG00000059122	FLYWCH1	FLYWCH-type zinc finger 1	3.4	8.99	9.11
Merged-chr5-156452516-2	chr5	156452268	156452767	Intergenic	MER20|DNA|hAT-Charlie	-32970	ENSG00000113249	HAVCR1	hepatitis A virus cellular receptor 1	2.49	19.97	12.53
Merged-chr9-137335403-2	chr9	137335155	137335654	Intergenic	Intergenic	-36976		RXRA	retinoid X receptor alpha	7.48	15.64	16.71
Merged-chr1-85725389-2	chr1	85725140	85725639	promoter-TSS (NM_198077)	promoter-TSS (NM_198077)	34	ENSG00000162642	C1orf52	chromosome 1 open reading frame 52	8.62	20.97	21.65
Merged-chr8-145026661-2	chr8	145026413	145026912	"intron (NM_000445, intron 2 of 32)"	"intron (NM_000445, intron 2 of 32)"	-1426	ENSG00000178209	PLEC	plectin	3.4	6.99	9.11
Merged-chr18-21166726-2	chr18	21166478	21166977	promoter-TSS (NM_000271)	promoter-TSS (NM_000271)	146	ENSG00000141458	NPC1	"Niemann-Pick disease, type C1"	7.94	16.31	17.09
Merged-chr12-104235047-2	chr12	104234799	104235298	promoter-TSS (NM_001031701)	promoter-TSS (NM_001031701)	73	ENSG00000111696	NT5DC3	5'-nucleotidase domain containing 3	7.48	14.98	15.19
Merged-chr8-135290665-2	chr8	135290417	135290916	Intergenic	Intergenic	319648	ENSG00000248492	ZFAT-AS1	ZFAT antisense RNA 1	2.72	12.65	14.43
Merged-chr17-4167253-2	chr17	4167004	4167503	promoter-TSS (NM_016376)	promoter-TSS (NM_016376)	-21	ENSG00000185722	ANKFY1	ankyrin repeat and FYVE domain containing 1	12.92	27.96	26.2
Merged-chr6-14211434-2	chr6	14211186	14211685	Intergenic	CpG	-74250	ENSG00000226673	LINC01108	long intergenic non-protein coding RNA 1108	7.94	17.97	23.93
Merged-chr17-48796895-2	chr17	48796647	48797146	promoter-TSS (NM_016424)	promoter-TSS (NM_016424)	30	ENSG00000108848	LUC7L3	LUC7-like 3 pre-mRNA splicing factor	12.92	27.29	26.96
Merged-chr1-15575734-2	chr1	15575485	15575984	"intron (NM_052929, intron 1 of 30)"	"intron (NM_052929, intron 1 of 30)"	-1966	ENSG00000142621	FHAD1	forkhead-associated (FHA) phosphopeptide binding domain 1	5.67	12.32	12.53
Merged-chr16-84150455-2	chr16	84150207	84150706	promoter-TSS (NM_003791)	promoter-TSS (NM_003791)	-92	ENSG00000140943	MBTPS1	"membrane bound transcription factor peptidase, site 1"	19.27	44.94	48.61
Merged-chr17-34891066-2	chr17	34890818	34891317	promoter-TSS (NM_178517)	promoter-TSS (NM_178517)	-238	ENSG00000278259	MYO19	myosin XIX	5.44	12.98	14.05
Merged-chr17-10600911-2	chr17	10600663	10601162	promoter-TSS (NM_004589)	promoter-TSS (NM_004589)	15	ENSG00000170222	ADPRM	"ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent"	9.52	20.97	23.17
Merged-chr1-110950348-2	chr1	110950099	110950598	promoter-TSS (NR_102697)	promoter-TSS (NR_102697)	83		LAMTOR5-AS1	LAMTOR5 antisense RNA 1	8.62	20.64	18.23
Merged-chr12-111882883-2	chr12	111882635	111883134	"intron (NM_001291424, intron 1 of 6)"	"intron (NM_001291424, intron 1 of 6)"	-10218	ENSG00000111252	SH2B3	SH2B adaptor protein 3	7.26	21.3	20.51
Merged-chr2-220025193-2	chr2	220024944	220025443	TTS (NM_144712)	TTS (NM_144712)	-394	ENSG00000187736	NHEJ1	nonhomologous end-joining factor 1	9.3	22.63	21.27
Merged-chr12-57617069-2	chr12	57616820	57617319	"intron (NM_007224, intron 1 of 1)"	"intron (NM_007224, intron 1 of 1)"	6287	ENSG00000182199	SHMT2	serine hydroxymethyltransferase 2 (mitochondrial)	2.72	17.31	14.43
Merged-chr18-3512145-2	chr18	3511897	3512396	"intron (NM_001242764, intron 7 of 9)"	"intron (NM_001242764, intron 7 of 9)"	-45898	ENSG00000266835	GAPLINC	"gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA"	0.91	12.32	12.53
Merged-chr18-77794109-2	chr18	77793861	77794360	promoter-TSS (NM_024805)	promoter-TSS (NM_024805)	236		RBFA	ribosome binding factor A (putative)	12.47	26.96	26.96
Merged-chr14-55369254-2	chr14	55369005	55369504	"exon (NM_000161, exon 1 of 6)"	"exon (NM_000161, exon 1 of 6)"	-288	ENSG00000131979	GCH1	GTP cyclohydrolase 1	3.85	9.65	10.25
Merged-chr9-127962769-2	chr9	127962520	127963019	promoter-TSS (NM_001174153)	promoter-TSS (NM_001174153)	52	ENSG00000136933	RABEPK	Rab9 effector protein with kelch motifs	7.03	14.98	17.09
Merged-chr20-5107439-2	chr20	5107190	5107689	promoter-TSS (NM_003818)	promoter-TSS (NM_003818)	-32	ENSG00000101290	CDS2	CDP-diacylglycerol synthase 2	27.21	58.91	65.32
Merged-chr9-132404570-2	chr9	132404322	132404821	promoter-TSS (NM_017873)	promoter-TSS (NM_017873)	123	ENSG00000148331	ASB6	ankyrin repeat and SOCS box containing 6	8.84	25.63	26.2
Merged-chr10-119806442-2	chr10	119806194	119806693	promoter-TSS (NM_014904)	promoter-TSS (NM_014904)	-111	ENSG00000177640	CASC2	cancer susceptibility candidate 2 (non-protein coding)	9.07	18.31	22.79
Merged-chr22-28272150-2	chr22	28271901	28272400	"intron (NM_001284277, intron 7 of 10)"	"intron (NM_001284277, intron 7 of 10)"	-43052	ENSG00000180957	PITPNB	"phosphatidylinositol transfer protein, beta"	4.08	9.99	9.49
Merged-chr15-83680445-2	chr15	83680197	83680696	promoter-TSS (NM_001160113)	promoter-TSS (NM_001160113)	53	ENSG00000169609	C15orf40	chromosome 15 open reading frame 40	11.34	22.97	23.55
Merged-chr20-57753015-2	chr20	57752766	57753265	Intergenic	Intergenic	13060	ENSG00000124203	ZNF831	zinc finger protein 831	4.31	14.31	11.39
Merged-chr16-81558132-2	chr16	81557883	81558382	"intron (NM_030629, intron 1 of 20)"	MIRb|SINE|MIR	9375	ENSG00000277255	MIR7854	microRNA 7854	2.95	28.63	27.34
Merged-chr19-30171599-2	chr19	30171351	30171850	Intergenic	Intergenic	-15273	ENSG00000166289	PLEKHF1	"pleckstrin homology domain containing, family F (with FYVE domain) member 1"	7.26	19.31	15.57
Merged-chr17-65449060-2	chr17	65448812	65449311	"intron (NM_181671, intron 1 of 9)"	L1ME1|LINE|L1	-75664	ENSG00000154217	PITPNC1	"phosphatidylinositol transfer protein, cytoplasmic 1"	4.53	10.65	11.01
Merged-chr2-169235693-2	chr2	169235445	169235944	Intergenic	Intergenic	77065	ENSG00000172292	CERS6	ceramide synthase 6	3.4	10.98	12.15
Merged-chr10-1095162-2	chr10	1094914	1095413	promoter-TSS (NM_004508)	promoter-TSS (NM_004508)	102	ENSG00000067064	IDI1	isopentenyl-diphosphate delta isomerase 1	31.74	69.57	67.98
Merged-chr11-127909719-2	chr11	127909471	127909970	Intergenic	Intergenic	-482485	ENSG00000134954	ETS1	v-ets avian erythroblastosis virus E26 oncogene homolog 1	7.48	21.97	22.03
Merged-chr1-2478044-2	chr1	2477795	2478294	Intergenic	CpG	9760	ENSG00000157873	TNFRSF14	"tumor necrosis factor receptor superfamily, member 14"	4.08	11.32	17.85
Merged-chr7-134855614-2	chr7	134855365	134855864	promoter-TSS (NM_001243754)	promoter-TSS (NM_001243754)	36	ENSG00000122783	C7orf49	chromosome 7 open reading frame 49	7.03	19.97	23.93
Merged-chr12-113416190-2	chr12	113415942	113416441	promoter-TSS (NM_002535)	promoter-TSS (NM_002535)	83	ENSG00000111335	OAS2	2'-5'-oligoadenylate synthetase 2	8.62	27.63	19.75
Merged-chr18-74779565-2	chr18	74779316	74779815	"intron (NM_001025101, intron 2 of 8)"	"intron (NM_001025101, intron 2 of 8)"	50510	ENSG00000197971	MBP	myelin basic protein	5.9	20.64	17.47
Merged-chr11-44087765-2	chr11	44087517	44088016	promoter-TSS (NM_032592)	promoter-TSS (NM_032592)	-37	ENSG00000110455	ACCS	1-aminocyclopropane-1-carboxylate synthase homolog (inactive)	12.02	24.3	25.06
Merged-chr18-20887037-2	chr18	20886788	20887287	"intron (NM_032933, intron 14 of 14)"	"intron (NM_032933, intron 14 of 14)"	-130888	ENSG00000134490	TMEM241	transmembrane protein 241	3.17	14.31	14.43
Merged-chr14-64194944-2	chr14	64194695	64195194	promoter-TSS (NM_030791)	promoter-TSS (NM_030791)	188	ENSG00000126821	SGPP1	sphingosine-1-phosphate phosphatase 1	6.35	18.31	14.05
Merged-chr11-118563403-2	chr11	118563154	118563653	Intergenic	Intergenic	13022	ENSG00000118094	TREH	trehalase	5.67	17.97	15.57
Merged-chr2-237994436-2	chr2	237994187	237994686	"5' UTR (NM_006710, exon 1 of 8)"	"5' UTR (NM_006710, exon 1 of 8)"	-352		COPS8	COP9 signalosome subunit 8	13.6	34.62	27.34
Merged-chr12-48100133-2	chr12	48099884	48100383	promoter-TSS (NM_001146075)	promoter-TSS (NM_001146075)	289	ENSG00000005175	RPAP3	RNA polymerase II associated protein 3	3.63	10.65	9.49
Merged-chr2-202898436-2	chr2	202898187	202898686	promoter-TSS (NM_003507)	promoter-TSS (NM_003507)	874	ENSG00000155760	FZD7	frizzled class receptor 7	7.03	15.98	17.85
Merged-chr10-104814239-2	chr10	104813990	104814489	"intron (NM_017649, intron 3 of 7)"	"intron (NM_017649, intron 3 of 7)"	-136164	ENSG00000148842	CNNM2	cyclin and CBS domain divalent metal cation transport mediator 2	5.44	15.64	12.53
Merged-chr15-74287029-2	chr15	74286781	74287280	promoter-TSS (NM_033244)	promoter-TSS (NM_033244)	-16	ENSG00000140464	PML	promyelocytic leukemia	8.16	23.97	20.51
Merged-chr20-37503925-2	chr20	37503676	37504175	"intron (NM_015568, intron 2 of 10)"	"intron (NM_015568, intron 2 of 10)"	51030	ENSG00000101447	FAM83D	"family with sequence similarity 83, member D"	2.95	7.66	8.73
Merged-chr4-108852690-2	chr4	108852441	108852940	promoter-TSS (NM_183075)	promoter-TSS (NM_183075)	27	ENSG00000155016	CYP2U1	"cytochrome P450, family 2, subfamily U, polypeptide 1"	9.75	20.97	23.17
Merged-chr12-68553548-2	chr12	68553300	68553799	promoter-TSS (NM_000619)	promoter-TSS (NM_000619)	28	ENSG00000111537	IFNG	"interferon, gamma"	5.21	15.31	14.05
Merged-chr8-103251233-2	chr8	103250984	103251483	promoter-TSS (NM_001172477)	promoter-TSS (NM_001172477)	-113	ENSG00000048392	RRM2B	ribonucleotide reductase M2 B (TP53 inducible)	11.79	28.63	25.44
Merged-chr2-242786517-2	chr2	242786269	242786768	Intergenic	CpG	-14540	ENSG00000188389	PDCD1	programmed cell death 1	3.85	24.3	17.09
Merged-chr13-30706897-2	chr13	30706648	30707147	Intergenic	Intergenic	-174294	ENSG00000102781	KATNAL1	katanin p60 subunit A-like 1	7.26	16.98	14.81
Merged-chr4-6202367-2	chr4	6202118	6202617	promoter-TSS (NM_144720)	promoter-TSS (NM_144720)	49	ENSG00000152969	JAKMIP1	janus kinase and microtubule interacting protein 1	2.95	13.65	17.85
Merged-chr10-22935385-2	chr10	22935136	22935635	"intron (NM_005028, intron 1 of 9)"	"intron (NM_005028, intron 1 of 9)"	-68118	ENSG00000150867	PIP4K2A	"phosphatidylinositol-5-phosphate 4-kinase, type II, alpha"	5.67	11.65	12.91
Merged-chr4-15773203-2	chr4	15772954	15773453	Intergenic	Intergenic	6728		CD38	CD38 molecule	3.4	12.65	8.73
Merged-chr10-71906093-2	chr10	71905844	71906343	"exon (NM_173555, exon 1 of 4)"	"exon (NM_173555, exon 1 of 4)"	-403	ENSG00000156521	TYSND1	trypsin domain containing 1	4.31	11.65	9.11
Merged-chr6-53412926-2	chr6	53412678	53413177	Intergenic	CpG	3000	ENSG00000001084	GCLC	"glutamate-cysteine ligase, catalytic subunit"	11.56	30.29	29.62
Merged-chr3-14466304-2	chr3	14466055	14466554	"intron (NM_001134367, intron 10 of 22)"	"intron (NM_001134367, intron 10 of 22)"	-22228	ENSG00000131389	SLC6A6	"solute carrier family 6 (neurotransmitter transporter), member 6"	3.85	18.64	12.53
Merged-chr22-40357613-2	chr22	40357364	40357863	"intron (NM_001291828, intron 2 of 4)"	"intron (NM_001291828, intron 2 of 4)"	-14792	ENSG00000100351	GRAP2	GRB2-related adaptor protein 2	7.03	20.3	18.99
Merged-chr13-20532771-2	chr13	20532523	20533022	promoter-TSS (NM_001190965)	promoter-TSS (NM_001190965)	38	ENSG00000121741	ZMYM2	"zinc finger, MYM-type 2"	9.52	21.97	21.65
Merged-chr17-66508596-2	chr17	66508347	66508846	promoter-TSS (NM_002734)	promoter-TSS (NM_002734)	-76	ENSG00000108946	PRKAR1A	"protein kinase, cAMP-dependent, regulatory, type I, alpha"	15.19	40.61	53.93
Merged-chr18-42259064-2	chr18	42258815	42259314	Intergenic	CpG	1074	ENSG00000152217	SETBP1	SET binding protein 1	4.31	11.65	11.77
Merged-chr11-507050-2	chr11	506801	507300	promoter-TSS (NM_203383)	promoter-TSS (NM_203383)	229	ENSG00000023191	RNH1	ribonuclease/angiogenin inhibitor 1	11.11	24.96	25.82
Merged-chr16-20911925-2	chr16	20911676	20912175	promoter-TSS (NM_173475)	promoter-TSS (NM_173475)	150	ENSG00000102897	LYRM1	LYR motif containing 1	8.62	20.64	17.47
Merged-chr3-142297717-2	chr3	142297468	142297967	promoter-TSS (NM_001184)	promoter-TSS (NM_001184)	49	ENSG00000175054	ATR	ATR serine/threonine kinase	15.19	33.29	30.76
Merged-chr12-56618086-2	chr12	56617837	56618336	promoter-TSS (NM_024068)	promoter-TSS (NM_024068)	39	ENSG00000139579	NABP2	nucleic acid binding protein 2	13.6	27.96	28.48
Merged-chr5-188845-2	chr5	188597	189096	"3' UTR (NM_052909, exon 18 of 18)"	"3' UTR (NM_052909, exon 18 of 18)"	2780	ENSG00000185028	LRRC14B	leucine rich repeat containing 14B	5.44	16.31	19.75
Merged-chr5-87437375-2	chr5	87437126	87437625	Intergenic	CpG	-127321	ENSG00000164180	TMEM161B	transmembrane protein 161B	4.99	21.3	15.95
Merged-chr15-65805420-2	chr15	65805171	65805670	"intron (NM_130434, intron 1 of 19)"	"intron (NM_130434, intron 1 of 19)"	-4189	ENSG00000074603	DPP8	dipeptidyl-peptidase 8	4.53	21.3	24.31
Merged-chr6-167370131-2	chr6	167369883	167370382	promoter-TSS (NM_003730)	promoter-TSS (NM_003730)	55	ENSG00000026297	RNASET2	ribonuclease T2	9.75	19.97	20.13
Merged-chr8-145550626-2	chr8	145550378	145550877	promoter-TSS (NM_012079)	promoter-TSS (NM_012079)	45	ENSG00000185000	DGAT1	diacylglycerol O-acyltransferase 1	10.43	28.96	27.72
Merged-chr3-25824818-2	chr3	25824570	25825069	"exon (NM_018297, exon 1 of 12)"	"exon (NM_018297, exon 1 of 12)"	-170	ENSG00000151092	NGLY1	N-glycanase 1	6.12	14.65	14.81
Merged-chr22-38203881-2	chr22	38203632	38204131	promoter-TSS (NM_001171690)	promoter-TSS (NM_001171690)	31	ENSG00000100116	GCAT	glycine C-acetyltransferase	6.8	22.3	19.75
Merged-chr22-39898269-2	chr22	39898021	39898520	promoter-TSS (NM_019008)	promoter-TSS (NM_019008)	14	ENSG00000100335	MIEF1	mitochondrial elongation factor 1	5.9	14.31	12.53
Merged-chr10-74020530-2	chr10	74020281	74020780	Intergenic	Intergenic	13147	ENSG00000168209	DDIT4	DNA damage inducible transcript 4	11.11	29.29	29.24
Merged-chr20-42544071-2	chr20	42543823	42544322	promoter-TSS (NM_001098796)	promoter-TSS (NM_001098796)	-580	ENSG00000124191	TOX2	TOX high mobility group box family member 2	3.4	15.31	13.29
Merged-chr2-128785399-2	chr2	128785151	128785650	promoter-TSS (NM_001145928)	promoter-TSS (NM_001145928)	531	ENSG00000136715	SAP130	Sin3A associated protein 130kDa	3.17	6.66	13.67
Merged-chr19-56116863-2	chr19	56116615	56117114	Intergenic	CpG	-5134	ENSG00000171443	ZNF524	zinc finger protein 524	14.51	33.29	29.62
Merged-chr1-205255067-2	chr1	205254819	205255318	Intergenic	L3|LINE|CR1	-29739	ENSG00000133069	TMCC2	transmembrane and coiled-coil domain family 2	5.67	12.32	12.53
Merged-chr11-35294224-2	chr11	35293976	35294475	"intron (NM_004171, intron 9 of 10)"	"intron (NM_004171, intron 9 of 10)"	-133808	ENSG00000026508	CD44	CD44 molecule (Indian blood group)	4.31	12.98	12.91
Merged-chr2-46406447-2	chr2	46406198	46406697	"intron (NM_005400, intron 14 of 14)"	"intron (NM_005400, intron 14 of 14)"	118094	ENSG00000116016	EPAS1	endothelial PAS domain protein 1	2.95	11.65	12.15
Merged-chr15-65822841-2	chr15	65822593	65823092	promoter-TSS (NM_016395)	promoter-TSS (NM_016395)	-15	ENSG00000074696	HACD3	3-hydroxyacyl-CoA dehydratase 3	6.8	14.98	18.23
Merged-chr2-232328997-2	chr2	232328748	232329247	"intron (NM_005381, intron 1 of 13)"	CpG	-208		NCL	nucleolin	9.98	20.97	21.65
Merged-chr16-75109282-2	chr16	75109034	75109533	"intron (NM_032268, intron 1 of 4)"	"intron (NM_032268, intron 1 of 4)"	-41387	ENSG00000166816	LDHD	lactate dehydrogenase D	5.44	23.97	24.31
Merged-chr3-18720901-2	chr3	18720652	18721151	Intergenic	Intergenic	-234172		SATB1-AS1	SATB1 antisense RNA 1	6.12	13.31	14.43
Merged-chr15-44955711-2	chr15	44955462	44955961	"exon (NM_001160227, exon 1 of 38)"	"exon (NM_001160227, exon 1 of 38)"	-165	ENSG00000104133	SPG11	spastic paraplegia 11 (autosomal recessive)	6.35	15.64	13.67
Merged-chr1-236162654-2	chr1	236162406	236162905	"intron (NM_002508, intron 12 of 19)"	"intron (NM_002508, intron 12 of 19)"	-65826	ENSG00000116962	NID1	nidogen 1	4.31	11.98	10.25
Merged-chr17-7307503-2	chr17	7307254	7307753	promoter-TSS (NR_037719)	promoter-TSS (NR_037719)	53		TMEM256-PLSCR3	TMEM256-PLSCR3 readthrough (NMD candidate)	9.3	19.31	20.51
Merged-chr12-53645883-2	chr12	53645635	53646134	promoter-TSS (NM_032889)	promoter-TSS (NM_032889)	-8	ENSG00000182544	MFSD5	major facilitator superfamily domain containing 5	5.67	12.32	18.23
Merged-chr18-59561701-2	chr18	59561453	59561952	Intergenic	CpG	1398		RNF152	ring finger protein 152	4.31	12.98	15.95
Merged-chrY-22737586-2	chrY	22737338	22737837	promoter-TSS (NM_004681)	promoter-TSS (NM_004681)	10	ENSG00000198692	EIF1AY	"eukaryotic translation initiation factor 1A, Y-linked"	0	8.32	11.39
Merged-chr9-136019842-2	chr9	136019593	136020092	"intron (NM_001042368, intron 1 of 17)"	CpG	-4765	ENSG00000160271	RALGDS	ral guanine nucleotide dissociation stimulator	11.79	36.28	43.29
Merged-chr3-48672929-2	chr3	48672681	48673180	promoter-TSS (NM_134426)	promoter-TSS (NM_134426)	4	ENSG00000225697	SLC26A6	"solute carrier family 26 (anion exchanger), member 6"	14.28	31.29	30.38
Merged-chr1-93348575-2	chr1	93348327	93348826	"intron (NM_001252273, intron 1 of 4)"	"intron (NM_001252273, intron 1 of 4)"	5869	ENSG00000154511	FAM69A	"family with sequence similarity 69, member A"	1.59	7.99	9.11
Merged-chr1-67894808-2	chr1	67894560	67895059	"intron (NM_001018069, intron 1 of 7)"	"intron (NM_001018069, intron 1 of 7)"	-1314	ENSG00000142864	SERBP1	SERPINE1 mRNA binding protein 1	3.85	13.98	11.01
Merged-chr7-8238154-2	chr7	8237905	8238404	"intron (NM_001276478, intron 6 of 13)"	L2|LINE|L2	-63528	ENSG00000003147	ICA1	islet cell autoantigen 1	4.31	16.98	13.29
Merged-chr10-104154177-2	chr10	104153928	104154427	promoter-TSS (NM_001077494)	promoter-TSS (NM_001077494)	158	ENSG00000077150	NFKB2	nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)	19.27	41.94	44.05
Merged-chr1-101178768-2	chr1	101178519	101179018	Intergenic	LTR12|LTR|ERV1	6428	ENSG00000162692	VCAM1	vascular cell adhesion molecule 1	1.36	9.65	8.35
Merged-chr19-2494911-2	chr19	2494663	2495162	Intergenic	CpG	-18789	ENSG00000099860	GADD45B	"growth arrest and DNA-damage-inducible, beta"	2.95	12.98	17.85
Merged-chr2-220144271-2	chr2	220144023	220144522	"intron (NM_006736, intron 1 of 8)"	CpG	-232	ENSG00000135924	DNAJB2	"DnaJ (Hsp40) homolog, subfamily B, member 2"	20.63	47.26	43.29
Merged-chr7-1330108-2	chr7	1329860	1330359	Intergenic	Intergenic	-57455		UNCX	UNC homeobox	2.95	9.65	7.6
Merged-chr11-118868796-2	chr11	118868547	118869046	promoter-TSS (NM_198489)	promoter-TSS (NM_198489)	47	ENSG00000186166	CCDC84	coiled-coil domain containing 84	12.47	24.96	33.8
Merged-chr6-119670991-2	chr6	119670742	119671241	promoter-TSS (NM_005907)	promoter-TSS (NM_005907)	60	ENSG00000111885	MAN1A1	"mannosidase, alpha, class 1A, member 1"	12.47	25.63	33.42
Merged-chr15-39915921-2	chr15	39915672	39916171	"intron (NM_152597, intron 10 of 11)"	MLT1M|LTR|ERVL-MaLR	-42641		THBS1	thrombospondin 1	3.4	19.97	19.37
Merged-chr11-66313690-2	chr11	66313442	66313941	promoter-TSS (NM_001104)	promoter-TSS (NM_001104)	20		ZDHHC24	"zinc finger, DHHC-type containing 24"	5.67	18.64	28.86
Merged-chr4-39699660-2	chr4	39699411	39699910	promoter-TSS (NM_005339)	promoter-TSS (NM_005339)	4	ENSG00000078140	UBE2K	ubiquitin conjugating enzyme E2K	12.02	28.96	30
Merged-chr3-36918064-2	chr3	36917815	36918314	"intron (NM_014831, intron 7 of 22)"	MLT1K|LTR|ERVL-MaLR	-68484	ENSG00000168016	TRANK1	tetratricopeptide repeat and ankyrin repeat containing 1	5.21	14.98	14.43
Merged-chr1-10585438-2	chr1	10585189	10585688	"intron (NM_004565, intron 2 of 8)"	"intron (NM_004565, intron 2 of 8)"	-50435	ENSG00000142655	PEX14	peroxisomal biogenesis factor 14	3.63	16.98	22.03
Merged-chr17-33571562-2	chr17	33571313	33571812	"intron (NM_144975, intron 1 of 4)"	"intron (NM_144975, intron 1 of 4)"	-1476		SLFN5	schlafen family member 5	8.16	24.96	26.58
Merged-chr12-6884132-2	chr12	6883884	6884383	"intron (NM_002286, intron 4 of 7)"	"intron (NM_002286, intron 4 of 7)"	-2463	ENSG00000089692	LAG3	lymphocyte-activation gene 3	6.58	18.64	20.51
Merged-chr1-12261892-2	chr1	12261643	12262142	"intron (NM_001066, intron 8 of 9)"	"intron (NM_001066, intron 8 of 9)"	-10122	ENSG00000263676	MIR4632	microRNA 4632	1.81	11.98	12.53
Merged-chr1-206753495-2	chr1	206753247	206753746	"intron (NM_182665, intron 1 of 4)"	"intron (NM_182665, intron 1 of 4)"	-23004	ENSG00000266094	RASSF5	Ras association (RalGDS/AF-6) domain family member 5	7.48	22.97	17.47
Merged-chr11-43890646-2	chr11	43890397	43890896	Intergenic	Intergenic	11711	ENSG00000166199	ALKBH3	"alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase"	4.53	11.98	16.33
Merged-chr15-65133847-2	chr15	65133599	65134098	promoter-TSS (NM_001195059)	promoter-TSS (NM_001195059)	234	ENSG00000241839	PLEKHO2	"pleckstrin homology domain containing, family O member 2"	5.21	19.31	19.75
Merged-chr3-184053709-2	chr3	184053461	184053960	promoter-TSS (NM_001171093)	promoter-TSS (NM_001171093)	7	ENSG00000175182	FAM131A	"family with sequence similarity 131, member A"	7.94	18.64	22.03
Merged-chr1-151736027-2	chr1	151735778	151736277	promoter-TSS (NM_001301371)	promoter-TSS (NM_001301371)	-71	ENSG00000143450	OAZ3	ornithine decarboxylase antizyme 3	6.8	15.64	17.09
Merged-chr14-24605298-2	chr14	24605050	24605549	promoter-TSS (NM_001281529)	promoter-TSS (NM_001281529)	68	ENSG00000092010	PSME1	proteasome activator subunit 1	13.38	31.29	34.18
Merged-chr15-73076125-2	chr15	73075876	73076375	promoter-TSS (NM_031284)	promoter-TSS (NM_031284)	-1	ENSG00000159322	ADPGK	ADP-dependent glucokinase	18.14	40.94	43.29
Merged-chr6-39197330-2	chr6	39197081	39197580	promoter-TSS (NM_003740)	promoter-TSS (NM_003740)	79	ENSG00000164626	KCNK5	"potassium channel, two pore domain subfamily K, member 5"	4.31	17.64	20.89
Merged-chr10-82295764-2	chr10	82295515	82296014	promoter-TSS (NR_120661)	promoter-TSS (NR_120661)	66	ENSG00000226659	LOC101929574	uncharacterized LOC101929574	5.21	12.65	13.67
Merged-chr16-81554927-2	chr16	81554679	81555178	"intron (NM_030629, intron 1 of 20)"	"intron (NM_030629, intron 1 of 20)"	12579	ENSG00000277255	MIR7854	microRNA 7854	2.95	15.31	18.61
Merged-chr4-1181140-2	chr4	1180892	1181391	"intron (NM_001199021, intron 1 of 7)"	L1MB3|LINE|L1	14142	ENSG00000159674	SPON2	"spondin 2, extracellular matrix protein"	4.53	17.64	12.15
Merged-chr13-31318636-2	chr13	31318387	31318886	"intron (NM_001204406, intron 3 of 5)"	"intron (NM_001204406, intron 3 of 5)"	-8991	ENSG00000132965	ALOX5AP	arachidonate 5-lipoxygenase-activating protein	11.34	26.96	22.79
Merged-chr12-122651375-2	chr12	122651126	122651625	promoter-TSS (NM_152759)	promoter-TSS (NM_152759)	891	ENSG00000158113	LRRC43	leucine rich repeat containing 43	1.81	8.99	10.25
Merged-chr9-82239339-2	chr9	82239091	82239590	"intron (NM_001282749, intron 5 of 18)"	"intron (NM_001282749, intron 5 of 18)"	-52652	ENSG00000106829	TLE4	transducin-like enhancer of split 4	5.21	12.32	11.77
Merged-chr1-236036569-2	chr1	236036320	236036819	"intron (NM_001301365, intron 1 of 52)"	"intron (NM_001301365, intron 1 of 52)"	6342	ENSG00000143669	LYST	lysosomal trafficking regulator	5.44	11.98	11.01
Merged-chr8-22298488-2	chr8	22298239	22298738	promoter-TSS (NM_001243974)	promoter-TSS (NM_001243974)	-5	ENSG00000120910	PPP3CC	"protein phosphatase 3, catalytic subunit, gamma isozyme"	7.94	23.97	20.89
Merged-chr1-233086279-2	chr1	233086030	233086529	promoter-TSS (NM_032324)	promoter-TSS (NM_032324)	91		NTPCR	"nucleoside-triphosphatase, cancer-related"	8.16	16.98	20.89
Merged-chr19-3133605-2	chr19	3133357	3133856	Intergenic	MIR|SINE|MIR	2424	ENSG00000060558	GNA15	"guanine nucleotide binding protein (G protein), alpha 15 (Gq class)"	7.48	20.64	18.23
Merged-chr1-6086348-2	chr1	6086099	6086598	"5' UTR (NM_172130, exon 1 of 15)"	"5' UTR (NM_172130, exon 1 of 15)"	-275	ENSG00000069424	KCNAB2	"potassium channel, voltage gated subfamily A regulatory beta subunit 2"	11.56	29.62	36.46
Merged-chr5-134240413-2	chr5	134240164	134240663	promoter-TSS (NM_032151)	promoter-TSS (NM_032151)	397		PCBD2	pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2	9.07	19.97	20.89
Merged-chr12-96631751-2	chr12	96631502	96632001	"intron (NM_005230, intron 2 of 4)"	"intron (NM_005230, intron 2 of 4)"	-43544	ENSG00000111145	ELK3	"ELK3, ETS-domain protein (SRF accessory protein 2)"	4.53	14.31	17.47
Merged-chr6-36723620-2	chr6	36723371	36723870	"intron (NM_020939, intron 13 of 20)"	MIRb|SINE|MIR	-57992	ENSG00000255587	RAB44	"RAB44, member RAS oncogene family"	3.17	14.98	12.15
Merged-chr5-106812746-2	chr5	106812497	106812996	"intron (NM_001962, intron 1 of 4)"	"intron (NM_001962, intron 1 of 4)"	-193850	ENSG00000184349	EFNA5	ephrin-A5	3.63	15.98	10.25
Merged-chr3-119042016-2	chr3	119041767	119042266	promoter-TSS (NR_046748)	promoter-TSS (NR_046748)	409	ENSG00000241155	ARHGAP31-AS1	ARHGAP31 antisense RNA 1	10.88	25.96	36.84
Merged-chr4-2292883-2	chr4	2292635	2293134	"intron (NM_001172656, intron 7 of 11)"	"intron (NM_001172656, intron 7 of 11)"	29145	ENSG00000123933	MXD4	MAX dimerization protein 4	13.83	33.62	27.72
Merged-chr9-136243043-2	chr9	136242794	136243293	promoter-TSS (NM_001280793)	promoter-TSS (NM_001280793)	6	ENSG00000148248	SURF4	surfeit 4	13.38	28.96	36.84
Merged-chr16-2097921-2	chr16	2097672	2098171	promoter-TSS (NM_001114382)	promoter-TSS (NM_001114382)	54	ENSG00000065057	NTHL1	nth-like DNA glycosylase 1	12.7	26.63	36.46
Merged-chr1-68150893-2	chr1	68150644	68151143	promoter-TSS (NM_001199741)	promoter-TSS (NM_001199741)	-33	ENSG00000116717	GADD45A	"growth arrest and DNA-damage-inducible, alpha"	14.74	40.94	35.7
Merged-chr5-96143888-2	chr5	96143640	96144139	promoter-TSS (NM_016442)	promoter-TSS (NM_016442)	-3	ENSG00000164307	ERAP1	endoplasmic reticulum aminopeptidase 1	5.44	12.98	15.57
Merged-chr10-43915905-2	chr10	43915657	43916156	Intergenic	Intergenic	11210	ENSG00000169813	HNRNPF	heterogeneous nuclear ribonucleoprotein F	13.15	28.29	30
Merged-chr22-46677023-2	chr22	46676774	46677273	"intron (NM_017931, intron 6 of 13)"	"intron (NM_017931, intron 6 of 13)"	-13162	ENSG00000075234	TTC38	tetratricopeptide repeat domain 38	3.17	15.98	18.61
Merged-chr3-122233784-2	chr3	122233536	122234035	promoter-TSS (NM_002264)	promoter-TSS (NM_002264)	-1	ENSG00000114030	KPNA1	karyopherin alpha 1	9.52	20.3	19.75
Merged-chr16-2042305-2	chr16	2042057	2042556	"intron (NM_004209, intron 2 of 3)"	CpG-8631	-2360	ENSG00000127561	SYNGR3	synaptogyrin 3	14.96	31.62	35.7
Merged-chr22-24830696-2	chr22	24830447	24830946	"intron (NR_103546, intron 19 of 19)"	"intron (NR_103546, intron 19 of 19)"	-2609	ENSG00000128271	ADORA2A	adenosine A2a receptor	7.26	21.64	19.75
Merged-chr7-32535192-2	chr7	32534943	32535442	promoter-TSS (NM_001139499)	promoter-TSS (NM_001139499)	-16	ENSG00000105778	AVL9	AVL9 homolog (S. cerevisiase)	11.79	28.29	27.72
Merged-chr6-130005283-2	chr6	130005035	130005534	"intron (NM_033515, intron 1 of 14)"	"intron (NM_033515, intron 1 of 14)"	-26086	ENSG00000146376	ARHGAP18	Rho GTPase activating protein 18	6.35	17.64	20.89
Merged-chr1-15650185-2	chr1	15649936	15650435	"intron (NM_052929, intron 10 of 30)"	"intron (NM_052929, intron 10 of 30)"	-76417	ENSG00000142621	FHAD1	forkhead-associated (FHA) phosphopeptide binding domain 1	2.95	9.65	10.25
Merged-chr14-35885813-2	chr14	35885565	35886064	Intergenic	Intergenic	11854	ENSG00000100906	NFKBIA	"nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha"	1.36	6.32	7.6
Merged-chr17-2653225-2	chr17	2652976	2653475	Intergenic	CpG	1749	ENSG00000221200	MIR1253	microRNA 1253	5.44	11.32	12.91
Merged-chr9-77703277-2	chr9	77703029	77703528	promoter-TSS (NM_017881)	promoter-TSS (NM_017881)	120	ENSG00000134996	OSTF1	osteoclast stimulating factor 1	15.19	33.62	43.29
Merged-chr2-48541599-2	chr2	48541351	48541850	promoter-TSS (NM_002158)	promoter-TSS (NM_002158)	195	ENSG00000170802	FOXN2	forkhead box N2	31.06	62.24	66.46
Merged-chr5-76034934-2	chr5	76034686	76035185	Intergenic	Intergenic	-23067	ENSG00000181104	F2R	coagulation factor II (thrombin) receptor	5.21	18.31	14.43
Merged-chr1-65329991-2	chr1	65329742	65330241	"intron (NM_002227, intron 8 of 24)"	"intron (NM_002227, intron 8 of 24)"	-102196	ENSG00000162434	JAK1	Janus kinase 1	6.12	16.31	14.05
Merged-chr20-5591696-2	chr20	5591447	5591946	promoter-TSS (NM_019593)	promoter-TSS (NM_019593)	24	ENSG00000125772	GPCPD1	glycerophosphocholine phosphodiesterase 1	11.56	29.29	33.42
Merged-chr3-17193309-2	chr3	17193060	17193559	Intergenic	Intergenic	-218621	ENSG00000264818	MIR3714	microRNA 3714	6.8	19.64	17.47
Merged-chr1-205561190-2	chr1	205560942	205561441	"intron (NM_181644, intron 6 of 9)"	CpG	-23079	ENSG00000174514	MFSD4	major facilitator superfamily domain containing 4	8.84	18.31	17.85
Merged-chr17-45907464-2	chr17	45907216	45907715	"intron (NM_148887, intron 1 of 5)"	MER5A|DNA|hAT-Charlie	-1442	ENSG00000159111	MRPL10	mitochondrial ribosomal protein L10	5.21	24.3	22.79
Merged-chr17-73937195-2	chr17	73936947	73937446	promoter-TSS (NM_001080542)	promoter-TSS (NM_001080542)	77	ENSG00000188878	FBF1	Fas (TNFRSF6) binding factor 1	12.7	28.29	31.9
Merged-chr13-41495915-2	chr13	41495666	41496165	promoter-TSS (NR_003365)	promoter-TSS (NR_003365)	5	ENSG00000239827	SUGT1P3	"SGT1 homolog, MIS12 kinetochore complex assembly cochaperone pseudogene 3"	7.48	15.64	17.47
Merged-chr19-3812571-2	chr19	3812322	3812821	"intron (NM_015174, intron 14 of 18)"	"intron (NM_015174, intron 14 of 18)"	10761	ENSG00000007264	MATK	megakaryocyte-associated tyrosine kinase	8.84	18.97	17.85
Merged-chr20-414332-2	chr20	414084	414583	Intergenic	MER21C|LTR|ERVL	-25624	ENSG00000125826	RBCK1	RanBP-type and C3HC4-type zinc finger containing 1	6.12	18.97	13.67
Merged-chr5-1800021-2	chr5	1799772	1800271	promoter-TSS (NM_032479)	promoter-TSS (NM_032479)	65	ENSG00000171421	MRPL36	mitochondrial ribosomal protein L36	8.39	17.97	22.03
Merged-chr8-99956555-2	chr8	99956306	99956805	promoter-TSS (NM_001142462)	promoter-TSS (NM_001142462)	76	ENSG00000164920	OSR2	odd-skipped related transciption factor 2	2.27	12.32	13.67
Merged-chr7-134143973-2	chr7	134143725	134144224	promoter-TSS (NM_001628)	promoter-TSS (NM_001628)	86	ENSG00000085662	AKR1B1	"aldo-keto reductase family 1, member B1 (aldose reductase)"	9.75	20.3	28.48
Merged-chr13-31248267-2	chr13	31248019	31248518	Intergenic	CpG	39347	ENSG00000132965	ALOX5AP	arachidonate 5-lipoxygenase-activating protein	7.94	17.64	19.37
Merged-chr14-51706911-2	chr14	51706663	51707162	promoter-TSS (NM_030755)	promoter-TSS (NM_030755)	-26	ENSG00000139921	TMX1	thioredoxin-related transmembrane protein 1	9.3	18.97	18.61
Merged-chr5-134210049-2	chr5	134209801	134210300	"5' UTR (NM_024715, exon 1 of 5)"	"5' UTR (NM_024715, exon 1 of 5)"	-590	ENSG00000113621	TXNDC15	thioredoxin domain containing 15	7.94	18.97	18.99
Merged-chr2-231090393-2	chr2	231090144	231090643	promoter-TSS (NM_001185015)	promoter-TSS (NM_001185015)	-51	ENSG00000135899	SP110	SP110 nuclear body protein	7.03	15.98	17.85
Merged-chr12-122018300-2	chr12	122018052	122018551	promoter-TSS (NM_001005366)	promoter-TSS (NM_001005366)	-63	ENSG00000089094	KDM2B	lysine (K)-specific demethylase 2B	5.21	15.31	17.47
Merged-chr19-41808759-2	chr19	41808510	41809009	"exon (NM_144732, exon 12 of 15)"	"exon (NM_144732, exon 12 of 15)"	7335	ENSG00000142039	CCDC97	coiled-coil domain containing 97	4.76	17.64	17.47
Merged-chr2-224810102-2	chr2	224809854	224810353	promoter-TSS (NM_020830)	promoter-TSS (NM_020830)	51	ENSG00000085449	WDFY1	WD repeat and FYVE domain containing 1	5.9	15.98	16.33
Merged-chr15-78343003-2	chr15	78342755	78343254	"intron (NM_144572, intron 2 of 12)"	"intron (NM_144572, intron 2 of 12)"	-26990	ENSG00000167202	TBC1D2B	"TBC1 domain family, member 2B"	2.49	15.31	15.57
Merged-chr19-29793623-2	chr19	29793375	29793874	"intron (NR_040029, intron 9 of 9)"	MIRb|SINE|MIR	89488		UQCRFS1	"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1"	1.59	10.65	12.15
Merged-chr8-29952729-2	chr8	29952481	29952980	promoter-TSS (NM_001128208)	promoter-TSS (NM_001128208)	192	ENSG00000104660	LEPROTL1	leptin receptor overlapping transcript-like 1	7.94	17.31	20.89
Merged-chr2-55509398-2	chr2	55509149	55509648	promoter-TSS (NR_027258)	promoter-TSS (NR_027258)	57	ENSG00000162997	PRORSD1P	"prolyl-tRNA synthetase associated domain containing 1, pseudogene"	7.03	21.3	20.13
Merged-chr4-25162142-2	chr4	25161893	25162392	promoter-TSS (NM_016955)	promoter-TSS (NM_016955)	-62	ENSG00000109618	SEPSECS	Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase	16.78	38.61	37.6
Merged-chr5-141348649-2	chr5	141348400	141348899	promoter-TSS (NM_183401)	promoter-TSS (NM_183401)	63	ENSG00000013561	RNF14	ring finger protein 14	20.18	44.94	41.39
Merged-chr8-25108553-2	chr8	25108305	25108804	"intron (NM_024940, intron 2 of 51)"	"intron (NM_024940, intron 2 of 51)"	-66267	ENSG00000147459	DOCK5	dedicator of cytokinesis 5	1.13	12.65	11.01
Merged-chr18-77748613-2	chr18	77748364	77748863	promoter-TSS (NM_006701)	promoter-TSS (NM_006701)	81		TXNL4A	thioredoxin-like 4A	8.39	19.64	25.44
Merged-chr1-65468347-2	chr1	65468099	65468598	promoter-TSS (NR_119383)	promoter-TSS (NR_119383)	189	ENSG00000226891	LINC01359	long intergenic non-protein coding RNA 1359	8.16	20.3	18.23
Merged-chr9-117148084-2	chr9	117147836	117148335	"intron (NM_030767, intron 1 of 21)"	"intron (NM_030767, intron 1 of 21)"	-8600	ENSG00000106948	AKNA	AT-hook transcription factor	13.15	32.29	27.72
Merged-chrY-2804048-2	chrY	2803799	2804298	"intron (NM_001145275, intron 1 of 5)"	CpG	-530	ENSG00000067646	ZFY	"zinc finger protein, Y-linked"	0	14.65	12.53
Merged-chr9-140100127-2	chr9	140099879	140100378	promoter-TSS (NM_001144026)	promoter-TSS (NM_001144026)	-9	ENSG00000188566	NDOR1	NADPH dependent diflavin oxidoreductase 1	6.8	13.98	15.57
Merged-chr2-122457183-2	chr2	122456934	122457433	"intron (NR_037857, intron 2 of 3)"	L2|LINE|L2	-37320	ENSG00000155438	NIFK	nucleolar protein interacting with the FHA domain of MKI67	8.62	22.3	18.61
Merged-chr18-43518640-2	chr18	43518392	43518891	"intron (NM_020964, intron 10 of 43)"	MIRc|SINE|MIR	-28664	ENSG00000152223	EPG5	ectopic P-granules autophagy protein 5 homolog (C. elegans)	3.63	15.64	15.19
Merged-chr19-45590973-2	chr19	45590724	45591223	"intron (NM_001007270, intron 2 of 2)"	L2a|LINE|L2	5458	ENSG00000104866	PPP1R37	"protein phosphatase 1, regulatory subunit 37"	4.31	21.97	23.93
Merged-chr12-122241005-2	chr12	122240756	122241255	"non-coding (NR_002809, exon 1 of 7)"	"non-coding (NR_002809, exon 1 of 7)"	-385	ENSG00000212694	LINC01089	long intergenic non-protein coding RNA 1089	10.43	24.3	23.17
Merged-chr22-30685707-2	chr22	30685458	30685957	promoter-TSS (NM_001037666)	promoter-TSS (NM_001037666)	91	ENSG00000239282	GATSL3	GATS protein-like 3	9.52	26.63	22.79
Merged-chr19-46282853-2	chr19	46282605	46283104	promoter-TSS (NM_001288765)	promoter-TSS (NM_001288765)	-23	ENSG00000104936	DMPK	dystrophia myotonica-protein kinase	4.08	12.98	9.11
Merged-chr4-122627988-2	chr4	122627739	122628238	Intergenic	Intergenic	9841	ENSG00000164111	ANXA5	annexin A5	4.53	19.31	16.33
Merged-chr4-6182783-2	chr4	6182535	6183034	"intron (NM_001099433, intron 1 of 20)"	"intron (NM_001099433, intron 1 of 20)"	-19534	ENSG00000152969	JAKMIP1	janus kinase and microtubule interacting protein 1	3.63	23.63	18.61
Merged-chr12-111180686-2	chr12	111180437	111180936	promoter-TSS (NM_002710)	promoter-TSS (NM_002710)	-97	ENSG00000186298	PPP1CC	"protein phosphatase 1, catalytic subunit, gamma isozyme"	9.52	28.63	32.28
Merged-chr15-70593033-2	chr15	70592784	70593283	Intergenic	Intergenic	202777	ENSG00000140332	TLE3	transducin-like enhancer of split 3	3.63	17.64	17.85
Merged-chr7-150363207-2	chr7	150362959	150363458	Intergenic	Intergenic	19586	ENSG00000106560	GIMAP2	"GTPase, IMAP family member 2"	6.12	12.65	14.05
Merged-chr15-39872580-2	chr15	39872331	39872830	promoter-TSS (NM_003246)	promoter-TSS (NM_003246)	700		THBS1	thrombospondin 1	4.53	10.65	14.05
Merged-chr6-96025458-2	chr6	96025210	96025709	promoter-TSS (NM_024641)	promoter-TSS (NM_024641)	-86	ENSG00000172469	MANEA	"mannosidase, endo-alpha"	13.38	26.96	27.72
Merged-chr1-67798894-2	chr1	67798645	67799144	"intron (NR_047583, intron 7 of 13)"	"intron (NR_047583, intron 7 of 13)"	-25847	ENSG00000081985	IL12RB2	"interleukin 12 receptor, beta 2"	4.08	17.31	14.43
Merged-chr20-56180298-2	chr20	56180049	56180548	"intron (NM_001160417, intron 7 of 7)"	Tigger1|DNA|TcMar-Tigger	-15334	ENSG00000124256	ZBP1	Z-DNA binding protein 1	3.63	17.64	16.33
Merged-chr15-40401183-2	chr15	40400935	40401434	promoter-TSS (NM_001003940)	promoter-TSS (NM_001003940)	99	ENSG00000104081	BMF	Bcl2 modifying factor	7.71	21.97	22.41
Merged-chr7-144533098-2	chr7	144532850	144533349	promoter-TSS (NM_001042482)	promoter-TSS (NM_001042482)	-47	ENSG00000196511	TPK1	thiamin pyrophosphokinase 1	12.92	26.63	29.24
Merged-chr14-50359721-2	chr14	50359473	50359972	promoter-TSS (NM_001663)	promoter-TSS (NM_001663)	14	ENSG00000165527	ARF6	ADP-ribosylation factor 6	12.02	29.96	25.82
Merged-chr8-95835445-2	chr8	95835197	95835696	promoter-TSS (NM_017864)	promoter-TSS (NM_017864)	72	ENSG00000164941	INTS8	integrator complex subunit 8	11.79	24.3	26.2
Merged-chrY-7141937-2	chrY	7141688	7142187	promoter-TSS (NR_028062)	promoter-TSS (NR_028062)	76	ENSG00000099725	PRKY	"protein kinase, Y-linked, pseudogene"	0	18.31	18.23
Merged-chr11-86748908-2	chr11	86748659	86749158	promoter-TSS (NM_001168724)	promoter-TSS (NM_001168724)	-22		TMEM135	transmembrane protein 135	17.23	36.95	39.5
Merged-chr6-170615769-2	chr6	170615520	170616019	promoter-TSS (NM_032448)	promoter-TSS (NM_032448)	41	ENSG00000112584	FAM120B	family with sequence similarity 120B	18.14	38.94	42.91
Merged-chr6-159240257-2	chr6	159240009	159240508	promoter-TSS (NM_003379)	promoter-TSS (NM_003379)	-198	ENSG00000092820	EZR	ezrin	7.03	14.31	17.09
Merged-chr20-52459073-2	chr20	52458825	52459324	Intergenic	Tigger1|DNA|TcMar-Tigger	-33174		SUMO1P1	SUMO1 pseudogene 1	5.67	11.98	11.39
Merged-chr4-170679159-2	chr4	170678911	170679410	promoter-TSS (NM_017867)	promoter-TSS (NM_017867)	67	ENSG00000056050	C4orf27	chromosome 4 open reading frame 27	7.71	18.97	28.1
Merged-chr18-77933464-2	chr18	77933216	77933715	"intron (NM_032510, intron 2 of 2)"	MLT1A|LTR|ERVL-MaLR	-27658	ENSG00000267270	PARD6G-AS1	PARD6G antisense RNA 1	7.94	21.64	22.79
Merged-chr11-67159349-2	chr11	67159100	67159599	promoter-TSS (NM_004584)	promoter-TSS (NM_004584)	74	ENSG00000172613	RAD9A	RAD9 checkpoint clamp component A	10.43	22.97	28.48
Merged-chr4-184580262-2	chr4	184580014	184580513	promoter-TSS (NM_152682)	promoter-TSS (NM_152682)	-68	ENSG00000182552	RWDD4	RWD domain containing 4	10.43	20.97	22.41
Merged-chr18-712743-2	chr18	712495	712994	promoter-TSS (NM_017512)	promoter-TSS (NM_017512)	82	ENSG00000132199	ENOSF1	enolase superfamily member 1	5.67	19.97	21.27
Merged-chr8-29266037-2	chr8	29265789	29266288	Intergenic	Intergenic	57771	ENSG00000120875	DUSP4	dual specificity phosphatase 4	6.12	22.97	17.09
Merged-chr22-43482281-2	chr22	43482032	43482531	"intron (NM_012263, intron 1 of 10)"	"intron (NM_012263, intron 1 of 10)"	-3153	ENSG00000100271	TTLL1	tubulin tyrosine ligase-like family member 1	3.4	10.65	10.25
Merged-chr3-46989939-2	chr3	46989690	46990189	"intron (NM_001277074, intron 1 of 6)"	"intron (NM_001277074, intron 1 of 6)"	-28052	ENSG00000160799	CCDC12	coiled-coil domain containing 12	6.58	16.98	15.57
Merged-chr19-7459977-2	chr19	7459729	7460228	promoter-TSS (NM_015318)	promoter-TSS (NM_015318)	21	ENSG00000104880	ARHGEF18	Rho/Rac guanine nucleotide exchange factor 18	13.6	27.29	34.56
Merged-chr15-57025779-2	chr15	57025531	57026030	"5' UTR (NM_001288588, exon 1 of 22)"	"5' UTR (NM_001288588, exon 1 of 22)"	-504	ENSG00000137871	ZNF280D	zinc finger protein 280D	7.48	19.31	18.61
Merged-chr6-112072539-2	chr6	112072290	112072789	"intron (NM_002037, intron 3 of 13)"	"intron (NM_002037, intron 3 of 13)"	-7795	ENSG00000010810	FYN	"FYN proto-oncogene, Src family tyrosine kinase"	5.21	11.65	11.39
Merged-chr1-38512664-2	chr1	38512416	38512915	promoter-TSS (NM_002699)	promoter-TSS (NM_002699)	215	ENSG00000185668	POU3F1	POU class 3 homeobox 1	3.17	11.65	13.67
Merged-chr2-191979370-2	chr2	191979121	191979620	"intron (NM_003151, intron 3 of 23)"	"intron (NM_003151, intron 3 of 23)"	-36616	ENSG00000138378	STAT4	signal transducer and activator of transcription 4	4.76	15.31	11.39
Merged-chr8-72756209-2	chr8	72755961	72756460	promoter-TSS (NR_033651)	promoter-TSS (NR_033651)	141	ENSG00000235531	MSC-AS1	MSC antisense RNA 1	2.04	22.97	27.34
Merged-chr14-64971163-2	chr14	64970914	64971413	promoter-TSS (NM_014950)	promoter-TSS (NM_014950)	129	ENSG00000126804	ZBTB1	zinc finger and BTB domain containing 1	6.8	15.98	16.33
Merged-chr17-62915666-2	chr17	62915417	62915916	promoter-TSS (NM_199340)	promoter-TSS (NM_199340)	763	ENSG00000176809	LRRC37A3	"leucine rich repeat containing 37, member A3"	2.04	6.99	5.7
Merged-chr14-69261304-2	chr14	69261055	69261554	promoter-TSS (NM_004926)	promoter-TSS (NM_004926)	673	ENSG00000185650	ZFP36L1	ZFP36 ring finger protein-like 1	5.44	14.31	12.53
Merged-chr17-81041682-2	chr17	81041434	81041933	"intron (NM_001004431, intron 1 of 3)"	"intron (NM_001004431, intron 1 of 3)"	-4116	ENSG00000176845	METRNL	"meteorin, glial cell differentiation regulator-like"	9.07	35.28	31.9
Merged-chr16-67194940-2	chr16	67194691	67195190	"intron (NM_018378, intron 1 of 2)"	"intron (NM_018378, intron 1 of 2)"	-1049	ENSG00000135722	FBXL8	F-box and leucine-rich repeat protein 8	5.21	13.31	11.39
Merged-chr5-141031047-2	chr5	141030798	141031297	promoter-TSS (NM_033449)	promoter-TSS (NM_033449)	61	ENSG00000197948	FCHSD1	FCH and double SH3 domains 1	4.53	12.32	14.43
Merged-chr19-42440855-2	chr19	42440606	42441105	Intergenic	Intergenic	-22673	ENSG00000105404	RABAC1	Rab acceptor 1 (prenylated)	7.03	21.64	18.61
Merged-chr19-51871098-2	chr19	51870850	51871349	"intron (NM_152353, intron 2 of 3)"	CpG-14282	-1158	ENSG00000160318	CLDND2	claudin domain containing 2	13.15	33.95	39.88
Merged-chr17-10018365-2	chr17	10018116	10018615	"intron (NM_201433, intron 1 of 13)"	(TCTG)n|Simple_repeat|Simple_repeat	78301	ENSG00000007237	GAS7	growth arrest-specific 7	4.31	19.64	8.73
Merged-chr12-102514032-2	chr12	102513783	102514282	promoter-TSS (NM_017915)	promoter-TSS (NM_017915)	-76	ENSG00000185480	PARPBP	PARP1 binding protein	16.78	38.28	39.88
Merged-chr17-80606465-2	chr17	80606217	80606716	promoter-TSS (NM_019613)	promoter-TSS (NM_019613)	55	ENSG00000141580	WDR45B	WD repeat domain 45B	5.44	13.98	15.19
Merged-chr11-130786467-2	chr11	130786218	130786717	promoter-TSS (NM_014758)	promoter-TSS (NM_014758)	85	ENSG00000120451	SNX19	sorting nexin 19	11.34	24.63	23.93
Merged-chrX-20009274-2	chrX	20009025	20009524	Intergenic	CpG	1377		LOC729609	uncharacterized LOC729609	6.58	16.31	16.33
Merged-chr22-42466859-2	chr22	42466610	42467109	promoter-TSS (NM_000262)	promoter-TSS (NM_000262)	13	ENSG00000198951	NAGA	"N-acetylgalactosaminidase, alpha-"	12.7	26.63	28.86
Merged-chr19-47220401-2	chr19	47220153	47220652	promoter-TSS (NM_001079880)	promoter-TSS (NM_001079880)	18	ENSG00000105287	PRKD2	protein kinase D2	5.21	11.32	14.05
Merged-chr22-50982749-2	chr22	50982500	50982999	Intergenic	CpG	3713	ENSG00000130487	KLHDC7B	kelch domain containing 7B	4.53	26.3	22.41
Merged-chr16-377423-2	chr16	377175	377674	"intron (NM_003502, intron 2 of 10)"	"intron (NM_003502, intron 2 of 10)"	-25252	ENSG00000103126	AXIN1	axin 1	5.9	25.96	20.51
Merged-chr2-68612917-2	chr2	68612668	68613167	"intron (NM_002664, intron 4 of 8)"	"intron (NM_002664, intron 4 of 8)"	-20595	ENSG00000115956	PLEK	pleckstrin	1.81	11.32	15.95
Merged-chr15-78337028-2	chr15	78336780	78337279	"intron (NM_144572, intron 3 of 12)"	MIRb|SINE|MIR	-32965	ENSG00000167202	TBC1D2B	"TBC1 domain family, member 2B"	4.76	16.64	14.43
Merged-chr6-26597201-2	chr6	26596952	26597451	promoter-TSS (NM_013375)	promoter-TSS (NM_013375)	-30		ABT1	activator of basal transcription 1	9.98	20.64	21.27
Merged-chr14-24664687-2	chr14	24664438	24664937	"5' UTR (NM_006405, exon 1 of 6)"	"5' UTR (NM_006405, exon 1 of 6)"	-255	ENSG00000100926	TM9SF1	transmembrane 9 superfamily member 1	9.3	26.63	34.94
Merged-chr1-28995246-2	chr1	28994998	28995497	promoter-TSS (NM_024482)	promoter-TSS (NM_024482)	-7	ENSG00000162419	GMEB1	glucocorticoid modulatory element binding protein 1	5.44	11.98	12.91
Merged-chr1-94483206-2	chr1	94482958	94483457	"intron (NM_000350, intron 36 of 49)"	L1MC4|LINE|L1	-103498	ENSG00000198691	ABCA4	ATP binding cassette subfamily A member 4	2.95	12.98	13.67
Merged-chr9-14322644-2	chr9	14322395	14322894	"intron (NM_001190738, intron 1 of 8)"	CpG	8599	ENSG00000147862	NFIB	nuclear factor I/B	3.4	16.98	13.67
Merged-chr17-48638046-2	chr17	48637798	48638297	promoter-TSS (NM_198380)	promoter-TSS (NM_198380)	382	ENSG00000006283	CACNA1G	"calcium channel, voltage-dependent, T type, alpha 1G subunit"	6.8	23.3	23.93
Merged-chr4-103682138-2	chr4	103681890	103682389	promoter-TSS (NM_005908)	promoter-TSS (NM_005908)	-12	ENSG00000109323	MANBA	"mannosidase, beta A, lysosomal"	8.84	24.96	25.06
Merged-chr8-144513035-2	chr8	144512787	144513286	promoter-TSS (NM_201589)	promoter-TSS (NM_201589)	434	ENSG00000182759	MAFA	v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog A	9.3	19.97	21.65
Merged-chr16-84627971-2	chr16	84627722	84628221	"intron (NM_021149, intron 2 of 3)"	"intron (NM_021149, intron 2 of 3)"	-23731	ENSG00000103187	COTL1	coactosin-like F-actin binding protein 1	8.39	39.28	34.56
Merged-chr2-145217712-2	chr2	145217463	145217962	"intron (NM_014795, intron 2 of 9)"	"intron (NM_014795, intron 2 of 9)"	59469	ENSG00000238057	ZEB2-AS1	ZEB2 antisense RNA 1	4.76	23.97	18.61
Merged-chr16-30429279-2	chr16	30429031	30429530	"exon (NM_001142305, exon 3 of 3)"	"exon (NM_001142305, exon 3 of 3)"	-10545	ENSG00000179965	ZNF771	zinc finger protein 771	15.64	31.62	38.74
Merged-chr19-3789140-2	chr19	3788892	3789391	"intron (NM_002378, intron 2 of 13)"	"intron (NM_002378, intron 2 of 13)"	2726	ENSG00000007264	MATK	megakaryocyte-associated tyrosine kinase	2.49	12.65	13.29
Merged-chr3-48936483-2	chr3	48936235	48936734	promoter-TSS (NM_000387)	promoter-TSS (NM_000387)	58	ENSG00000178537	SLC25A20	"solute carrier family 25 (carnitine/acylcarnitine translocase), member 20"	7.26	20.64	15.95
Merged-chr7-102105399-2	chr7	102105150	102105649	promoter-TSS (NM_017621)	promoter-TSS (NM_017621)	-9	ENSG00000161036	LRWD1	leucine-rich repeats and WD repeat domain containing 1	15.64	37.61	36.84
Merged-chr11-66025448-2	chr11	66025199	66025698	"intron (NM_001134774, intron 1 of 14)"	CpG	-274	ENSG00000174996	KLC2	kinesin light chain 2	4.76	10.32	11.39
Merged-chr4-113152829-2	chr4	113152581	113153080	promoter-TSS (NM_001128426)	promoter-TSS (NM_001128426)	65	ENSG00000138660	AP1AR	adaptor-related protein complex 1 associated regulatory protein	14.51	34.95	34.94
Merged-chr8-48873089-2	chr8	48872841	48873340	promoter-TSS (NM_006904)	promoter-TSS (NM_006904)	-327	ENSG00000104738	MCM4	minichromosome maintenance complex component 4	2.95	8.99	7.98
Merged-chr16-3019231-2	chr16	3018983	3019482	promoter-TSS (NM_152341)	promoter-TSS (NM_152341)	14	ENSG00000162073	PAQR4	progestin and adipoQ receptor family member IV	6.12	15.64	20.13
Merged-chr14-25162404-2	chr14	25162155	25162654	Intergenic	Intergenic	58972	ENSG00000100453	GZMB	granzyme B	6.8	14.98	16.33
Merged-chr19-17581270-2	chr19	17581021	17581520	promoter-TSS (NM_198580)	promoter-TSS (NM_198580)	30	ENSG00000130304	SLC27A1	"solute carrier family 27 (fatty acid transporter), member 1"	7.94	16.64	19.37
Merged-chr10-76995855-2	chr10	76995606	76996105	promoter-TSS (NM_144589)	promoter-TSS (NM_144589)	85	ENSG00000165644	COMTD1	catechol-O-methyltransferase domain containing 1	9.98	21.97	23.93
Merged-chr6-11093957-2	chr6	11093709	11094208	promoter-TSS (NM_001135575)	promoter-TSS (NM_001135575)	308	ENSG00000224531	SMIM13	small integral membrane protein 13	11.79	25.3	23.93
Merged-chr18-21033176-2	chr18	21032927	21033426	"5' UTR (NM_003831, exon 1 of 13)"	"5' UTR (NM_003831, exon 1 of 13)"	-389	ENSG00000101782	RIOK3	RIO kinase 3	9.07	19.97	20.89
Merged-chr3-5018956-2	chr3	5018708	5019207	Intergenic	Intergenic	2140	ENSG00000134107	BHLHE40	"basic helix-loop-helix family, member e40"	3.63	18.97	19.75
Merged-chr12-133264033-2	chr12	133263785	133264284	promoter-TSS (NM_006231)	promoter-TSS (NM_006231)	-76	ENSG00000177084	POLE	"polymerase (DNA directed), epsilon, catalytic subunit"	11.56	35.95	33.8