##fileformat=VCFv4.2 ##fileDate=20180208 ##source=GeneiousV10.1.3 ##INFO= ##INFO= ##FORMAT= ##INFO= ##FORMAT= ##INFO= ##INFO= ##INFO=50% P-value"> ##INFO=65% P-value"> ##INFO= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT Variants:_Swiss59_ref_MAFFT.aln NC_009749_FT__subsp_holarctica_FTNF00200 1864 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 4402 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 6786 . AATGATTAAAAAAGTACTGATTGCCAATAGAGGTGAAATAGCTCTTAGAATTTTAAGAGCTTGTAGAGAGTTGGGAATTAAGACAGTCGCTGTGTATTCTACAGCTGATGCTAACCTTATGCATGTCAAACTAGCTGATGAAGCAGTTTGTATAGGTCCTCCTGCTCCTAATCTTAGTTATCTAAATATCCAAGCTATTATAACTGCCGCTGAAATTACTAATGCTGATGCGATACATCCAGGTTATGGTTTCTTATCAGAAAATGCAAAATTTGCTAAAGCTGTTGAAGAAAGTGGCTTTATATTTATCGGTCCACGTGCAGAAAGCATAGAGATAATGGGCGATAAAGTTGAAGCTATTAGATATATGAAAAAAGCTGGTGTTCCATGTGTGCCAGGTTCAGGCGGTCCATTAGGCAGCGATGAAAAGAAAAACTTAGAAATTGCTGAAAAAATCGGCTATCCAGTTATTATTAAAGCTGCTGGTGGCGGTGGCGGTCGCGGAATGAGTATCGTTAGAAAGAAAAAAGATCTTATTAGCGCTATTTCTATAACAAAGAGTGAAGCGAGAATAGCTTTCAATAATGAT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 9045 . AATGTCGGATTTCACTAAAGATATTGATGTTTTAGAAACCCAAGAATGGCTTGAGGCTTTTGAAGATGTCATAAAAAGAGAAGGTGCTGATAGAGCCAAGTTTTTATTTGAACAATTACTTGCTAAAGGTTCCGAGCTTGGTATAAAAAGTGCTTACTCAACTGCTAAAGTTAAGAACTATGTCAACTCTATAGATGTCTCTGAACAACCAAGTTATCCAGGAGATATAGAGCTTGAACAAAAGATTGAAGCTATCAATAGATGGAACTCTACAGTTATAGTAGCTGCAGCTAATAAGAAAGATGGTTCTATAGGTGGACATATTGGTACTGGTGCCGGCGCTATGACGCTTTATGAAGTAGGTTTCAACCATTTTTGGAAAGCACCCAATGATGAACATGCTGGTGATTTGATATTCTATCAAGGACATCTTTCTCCTATTGTTTATGCGCGTTCATTCCTAGAAGGTAGAATAACTGCAGAACAGTTAGAAAACTTTAGAAAGCAAGCATTTAATGGGCAAAATGCGGTATCTTCATATCCTCATCCTTATCTACAACCGACTTATTGGCAGTTCCCAACTGTTTCTATGGGGTTAGGACCACTTCAAGCTATTTATCAAGCTAGATTTATGAAGTATCTAGAGGCTAGGGGTTTAGCAAAAACATCTGATCGCAAAGTTTGGGCATTCTGTGGTGATGGCGAGATGGATGAGCCAGAATCAATTGGTTCTATCACTAGAGCAGGTCGTGAAGGGCTGGATAACCTTATATTTGTAGTTAATTGTAATCTACAAAGGCTAGATGGTCTGGTAAATGGTAATGGTAATATTGTTGAAGAATTAGCAGATGTATTTGCTGGTGCTGGTTGGAATGTTATCAAGGTGTTGTGGAGTAGTGACTGGGATAAATTATTACAAGATCCAAGAGGTGGTAAAAAACTTGCTCAAAGGTTAAGTGAATTAAATGATGGACAATTCCATACAATTAAAGCTCATGGTGGTGCTGAGTGTCGTAGAGTTGTCTTTAGCGGTGATGAAGATTTAGAAGCGCTAGCTAAGGATATGACAGATGATGATATTCAAGCATTACGTCGTGGAGGCCATGATCCATTGAAAATTTATGCAGCATATAAGAAGGCGGTAGAGAATCCAAATGGTCGTCCAACACTAATTCTTCCTATGACTGTTAAGGGCTATGGTTTAGGGGAGTGGGGTGAGTCAAAAAATATTGCCCACAATGTCAAAAAACTTGATACTGATGCACTTGAGCACATCAAAAATAGATTCAATGTCCCGGCTTCAAAAGAGGATATCGAAAACTATAGACTCATCAAGCTAGATGAAAATTCGCCTGAGATGAAATATCTACACTCTAAGAGAAAAGACCTAGGTGGTTATATTCCTAAGAGATTGGAGAATAAGCAAGCATTAGAGATTCCAAGCTATAAAGATTTTGCTAAGAGCTTATTGGATGATAGTGGTGATAGAGAATTTTCAACTACTACCGCATTTGTAAGAATATTATCCTACTTGGCAAAAGATAAGAATCTAGGGAAGCATATTGTACCAATCACGGTAGACGAGTCACGTACTTTTGGTATGGAGGGCTTGTTTAGGCAGTTAGGTATCTATAACCCACATGGTCAGCAATATGTGCCAGAAGATAAACAGCAAGTAATGTTCTATAAAGAGTCTGTAGATGGTCAGATTTTACAAGAAGGTATTAATGAGCAAGGAGGTTTTTGTTCTTGGATTGCCGCAGCTACTTCATATAG A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 10821 . C T . . NS=1;RF=0.951;VF=0.033;SB=1.000;VARSEQ=FT55_A_ZH,FT64_A_ZH;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 10820 . GC G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 10821 . CGTACACAAGGTTCCAATGATTCCTTTCATGATTTACTACTCAATGTTTGGTTTCCAAAGATTTGGTGATCTTGCTTGGGCAGCTGGCGATTCGATGGCAAAAGGTTTTGTAATTGGTGGGACTTCAGGACGTACAACTCTAAATGGCGAAGGTTTGCAGCATGAAGATGGTCATAGCCATATCCAAGCTGGTCTTATACCTAATTGTATCTCTTATGATCCTACATATGCTTATGAATTAGCTGTAATCCTTGGCGAAGGTATGAAGAGAATGTATGTTGATGGTGATCATGTATATTACTATATTACAGTAATGAATGAGAACTACTTTCATAGAGCGATGCCAGAGGGCTGTGAAGAAGGTATCATCAAGGGCTTATATAAGTTAGATGAAGAGAAAAAGCCAGCATCTAAGCATGTACAGCTATTGGGTTCTGGTTCTATTCTAAGAGAAGTTGAAGCTGCAGCTAAGATGCTAAAAGAAGAGTATGGAATTACTTCTAATGTTTGGAGTATGACTTCAGCAAATGAGCTTTATAGAGAAGCTAAAGATGTAGCTAGAGCTAAT C . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 13022 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 13980 . T C . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT7_H_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 16344 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 19774 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 20630 . G GT . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT54_T_LU;SB50=1.0;SB65=1.0;TYPE=Insertion(tandemrepeat) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 20681 . GTATGGGGAAAGAACATAATCATCATGATAGAGAACTCAAAAAAACCTTTCTAGCTGATGCTACAAGTGCTACGATATCTGGGATATTAGGCTCAAGCCCATCAACTGTAGTTGTTGAATCTGGAGTAGGCATTGCTCAGGGCGCTCGTTCAGGTCTCACAGCGATCTTTGCTGGCTTAATGTTTCTACCTTTTTTATTTCTATCGCCCTTAATAAGTTCTATTCCTATAGAAGTAATTTCTCCGGCACTAGTATTAATAGGGATAATGATGATGCAGCAGGTAGCAAATGTCGATTGGAGTGACTTTGTTCAAGCTACACCTGCTTTTTTCACTATTATTATGATGACTTTAGCATCATCAATATCTACAGGTATTGCATCTGGAATTATAGTTTGGTTTTTGATTTCAATATTCTGCAATAAAAAAGAGCTAAACCTTACAGCAGCTATTATTATTATTTTTTGTGTTATTATGTTTCTTCATGCTGTTAATCTATTCTAA G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT54_T_LU;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 21311 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 21665 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 27220 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 33383 . GT G . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion(tandemrepeat) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 33406 . ATATTCTTTAGTGTTGTTCTAACTACAACTATGGTACGATATCTTGCTGTTGTAAGACCTATAATGCTTATTTTTGCAGTTTTGTTTTTAGTTTATTATGGAATATTTTCAATAAAATCTTCTTTTACTAGAAAATAA A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 38924 . A G . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT32_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 38925 . G GCTATGA . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT32_H_LU;SB50=1.0;SB65=1.0;TYPE=Insertion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 42618 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 43666 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 44132 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 44843 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 47509 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 49015 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 49017 . AATTGGTATTAGTATCAGACAACAGCTAGATAATTTATACTCACAATACAAAAAACAAACTAAAGATTAA A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 49355 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 49855 . T A . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT19_H_BE,FT33_H_BL,FT73_H_LU;SB50=0.25;SB65=0.55;TYPE=SNP(transversion) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 51778 . C A . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT52_T_LU,FT53_T_LU,FT54_T_LU;SB50=0.25;SB65=0.55;TYPE=SNP(transversion) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 55553 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 55999 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 57159 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 58435 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 61894 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 62979 . AGTGTTTTTTTTAAGAAAGAAGTTTGTGTTAGCCTCTCTTCTT A . . NS=1;VF=0.967;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=3.5E-18;SB65=1.8E-11;TYPE=Deletion DP:AO 61:59 NC_009749_FT__subsp_holarctica_FTNF00200 68205 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 68952 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 69505 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT49_H_FR;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 70722 . C A . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT29_H_LU,FT66_A_SG;SB50=0.50;SB65=0.85;TYPE=SNP(transversion) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 71346 . A AATGATTAAACAAGATAGTAAGCTTTTTATTCTTACACTTGGGCTTTTGGCA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 71913 . A T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 73252 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT22_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 73970 . CA C . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion(tandemrepeat) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 73993 . GCAGCTAAACAC G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 74005 . A G . . NS=1;RF=0.885;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 74004 . CA C . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 74005 . ACACAAGTTGGTTTTGTAAGAGCTTTAGCAAAAGAAGGTGCTGAGCACAATATCTCATCTAACCTAATTGGTCCAGGTTTTGTGATGACGCCATTAGTAGAAAAGCAAATTCCAGAGCAAGCAAAAGAGCTAAATATTTCCGAAGAAGAAGTTGTCAAAAATATTATGCTT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 74176 . G A . . NS=1;RF=0.885;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 74175 . TG T . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 74176 . GGTGGCACTGTAGATGGTGAGTTCACAACGGTCCAAGATATCGCTGATACAGCCATATTCTTAGCTGGATTCAAAACCAATGCTCTAACAGGTCAGAAAATTTTGGTAAGTCATGGTTGGGGAATGTAA G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 76285 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 77669 . T A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 79678 . ATCG CCAA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Substitution DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 79683 . TT CA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Substitution DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 79686 . TTC CAA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Substitution DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 79690 . A T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 79692 . GGA CCC . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Substitution DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 79699 . GTAATAGCAGATATTATTAATCAGTATGATAAACATCTACATTATTTACATTTAGCAGTAGCTGATAAAGATATTATCA T . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 79781 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 80546 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 82020 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 82614 . GATGACATTACAACAAATCAAAGAAATTTACTTAAGACCATTAACAGAATTAATTTTAAAAGCTTTAGAGATTCATAATAAAAATTTTGGTAATGATATCGAGTTATGCTCACTAAAAAGTATCAAAACTGGTACTTGCCCAGAAGACTGTAAATATTGTCCTCAAAGTGGTCATTATAATACTAGTATCGAAAAGCATAAACTATTAGATAAAGATAGTATATTGGCAGAAGCAAAAAATGCTAAAGATGCTGGATCTAAAAGGTTCTGTATGGGCGCTGCTTGGAAACACATTCCTAAAAAAGACTTTGATCAAGTTGCTGAGATTATCACTGAAGTCAAAAACCTTGGCTTAGAAACATGT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 83187 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 88850 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 90476 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT32_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 91311 . GTTGTGCACAGAACCT G . . NS=1;VF=0.033;SB=1.000;VARSEQ=FT17_H_LU,FT8_H_AG;SB50=0.50;SB65=0.85;TYPE=Deletion DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 91327 . G A . . NS=1;RF=0.869;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 91326 . TG T . . NS=1;VF=0.033;SB=1.000;VARSEQ=FT17_H_LU,FT8_H_AG;SB50=0.50;SB65=0.85;TYPE=Deletion DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 91327 . GGTTTTTGGCTTGGTAATCATGCTTTTGCTCATGAAAAACAGCTTTGTAATAATAGTCTATTACATAAAAAAGCTACACAGCTTGCAGATAGTGGTCTAACACTTATATTTGTTGGCAATAGTAAAGATATAATTGGTATTATAGCTATACAAGATAAGATAAAAGCAAATATAAATATTTGTCTAAAACAACTAAAAAACCTTGGGATT G . . NS=1;VF=0.033;SB=1.000;VARSEQ=FT17_H_LU,FT8_H_AG;SB50=0.50;SB65=0.85;TYPE=Deletion DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 91949 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 93147 . A AGTGACTACT . . NS=1;VF=0.787;SB=1.000;VARSEQ=FT11_A_JU,FT13_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT27_H_SG,FT28_H_SG,FT30_H_SG,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT56_A_AG,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU;SB50=7.1E-15;SB65=2.1E-9;TYPE=Insertion DP:AO 61:48 NC_009749_FT__subsp_holarctica_FTNF00200 95448 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 97837 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT33_H_BL;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 99854 . C CA . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=Insertion(tandemrepeat) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 99875 . AAATAAAAAATCAACGTGCTACACTTAACTATTTTAATAAACATCATAAGTCAATAAATCTTCTAAATGCTATAGAAGAGCTAAAAAGAGTAGCACAACTTATCAAAAATGTTAAAACTCTAAATGATGTACTTGGTTACGAGGGTTATGCGGCTAATATATATTTTTCAAGTTTGGCTAAAGATAAATTTTTATCAGCGAGTTTTGCCAATAGGGAGGGTCGAGGCCTCAGGAGATTGCTAATAGTATACTAA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 100584 . GTTGTTAAATGATTTAGCTGGGGTGTTACAGGTATCTCGTAATCAGTTGCTAAGTTCAGTTGAAGAGTGGTTTCAACAAGCACAACGAGTTGGTGAAATATCAAAATCTCAAGATGAGCAAATATTTGAATGGTTAAAAAGCTTTAAAATAGCTAGTTATTGTAAAGCCGCGGTGGAAATGCAAAAACAATATCGAGGAACTTTAAAAAACGCGATTCAAACTGCTATATTTAGACAAAGTGAAAATATAAACAAAAATAAAAATAAAAATAAAAATACTGGTAATCAACAACAAGCACTTTCAGAAAATTCCAAAGATGTAAAATCACTAACAGCGGACGAGAAAAAACTCCTAAAACTAATAGAAAATATAGCTAAAGCATCACAGAAAATAGGTGAAAGTTTAGGACTAAATGATAAGCAAATTAAAAAATTTAACTCAATATATAATTTTGCACAGATTCAACAAATTGCTTTTGCAGAGCGTAAAGGTAATGCTAACACTTGTGCAGTTTATAGTGCTGATAATGCTCATAGAATGCAACAAATTAAGATCACTGAGCTTGTAGAGGACAATAAAGATAACATAATCTTAAGTGCCAAAGCTCAGAGACTACCGGCGATACCAACTAGAATAGTTGACGGTGCGGTTAAGAAA G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT68_A_SO;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 101788 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 101830 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 102941 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 110464 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 113508 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 116614 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 126890 . G A . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT27_H_SG,FT28_H_SG;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 132027 . GTTGCCAGGTTTATCAATA G . . NS=1;VF=0.689;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT57_A_BE,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=4.5E-13;SB65=2.8E-8;TYPE=Deletion DP:AO 61:42 NC_009749_FT__subsp_holarctica_FTNF00200 132466 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 132586 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 133026 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 134914 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 135322 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 136451 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 140464 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 142269 . A G . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 142419 . TAGACAAATAAACAATCTAGCTGGATATTTGCTTGTACCTTATTTATTATGGATAAGCTTTGCATGGATACTTAATTTCAGTTAC G . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 142506 . AGTAC CACTG . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Substitution DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 142512 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 142514 . AT CC . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Substitution DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 142517 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 144846 . AATGAAAGAGGCTAATAAGCTTAAAGTGTTTATGATTATATTCTTCTCAGCAATGGGTGGAATGTTGTACGGATATGATATAGGTATAATAGGTGGCGCTTTACCTTTTATAAAATCTGAATTGGGTATGACTGCAGCACAGGAATCATTCTTAGGGGGCTCTGTTTTATTTGGTGGAGCTTTTGCAATTCTTATAGGTGGAGTACTAGCAGATATTTTTGGTAGAAAAAATATGATCACAGCATCTGGATTGATATTTACAATATCAGTTTTTATGATTTATTCTGTTGAAAGTTATAATTTTCTACTATTCTCAAGATTAATTCAAGGTGTAGCTGTTGGTTTTATATCTATAACAGTTCCATTATATTTAACAGAATCTGTGCCTAGTATGATTCGTGGTTTAGCCGTTACATGTTTTCAGTTATTCTTAACAGCGGGGATATTAATATCTGTTGCTATAAGCTTATTGTTTATATCAAATGATCCAGTAACTGGTCTAGAGATTGGTGACTGGAGAAAT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 158686 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 159110 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 165591 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 166264 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 173129 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 173622 . ATTGACACAATTAAATATCGATTATGTAATTTGTGGTTATGAAGACTCTGTAGCAATAGCTGATTATCTTATGCAGCAAATTACAAATTACTCAAATGATATAGCTACCTCAGAATATAGGAATAATAAATACCTGATGCACCAAGTGCTTAAGGATAACCAGCTAAATCATCTTAAACAAGAAATTATTAATTTTAAAAATATTAAAAGTAGTCATTTTAACTATCCTTGTTTTATAAAGCCA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT30_H_SG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 175429 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 176401 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 178686 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT56_A_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 179079 . A AATG . . NS=1;VF=0.951;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=6.9E-18;SB65=2.8E-11;TYPE=Insertion DP:AO 61:58 NC_009749_FT__subsp_holarctica_FTNF00200 182759 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 184610 . T C . . NS=1;RF=0.066;VF=0.934;SB=1.000;VARSEQ=FT10_A_JU,FT13_A_BS,FT14_A_BS,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG,NC_019551_FT__subsp_holarctica_FSC200;SB50=1.4E-17;SB65=4.3E-11;TYPE=SNP(transition) DP:AO 61:57 NC_009749_FT__subsp_holarctica_FTNF00200 188170 . A T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 188172 . AAGTTAG A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 190284 . A C . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT67_A_GE;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 190290 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT29_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 190533 . A ATTGGATAGTGATTACGACTTAGTAATACGTATGGGCAATCTGGTAGATTCTAACCTTATAGTTTCGCCTTTACGTACTGTTGCTACCAAATATGTTGCTAGTCATGATTTTATTCAAAAGCATGGGCAAGTAACCAATCCTCGTCAGCTCGAAAACTTACCACTAATTTATGGTAGTGTCAAACGGTGGTCATTAATCTCAAATAAAGATAAATATACTCTACATATTCATAATAATGGCATTCATGTCACCAGTGGTAGAGTT . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 191846 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 199693 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 201823 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 203808 . A AATGATATATATACTATTTTTTAGA . . NS=1;VF=0.967;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=3.5E-18;SB65=1.8E-11;TYPE=Insertion DP:AO 61:59 NC_009749_FT__subsp_holarctica_FTNF00200 204490 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 206139 . GTTGTGCTCCAATGTATCTGCCAATAAAGATTCTAATGGTGTTAATGAGGGTCCATGTATATTAATTTTTGGT G . . NS=1;VF=0.869;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT56_A_AG,FT58_A_SO,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT68_A_SO,FT70_A_SO,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=2.2E-16;SB65=2.4E-10;TYPE=Deletion DP:AO 61:53 NC_009749_FT__subsp_holarctica_FTNF00200 206211 . TATGGTTAATGGTGATGAATTTAACAGTATC T . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT17_H_LU;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 206242 . A G . . NS=1;RF=0.885;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 206241 . CA C . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT17_H_LU;SB50=1.0;SB65=1.0;TYPE=Deletion(tandemrepeat) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 206242 . AAAATTATCAACTCTCTTTTAGAAAAAACCAATCTTAAACAGTTAAATGGTACAATCGTAGCTATTCCGGTACTAAATGTTTTTGGTTTAGTCCATAGTATCAAGCATAACCCTACCCTAGAACAAGCTTTTCCAGGGGATGAGAATGGCTCATATATGCACCGTTATGCTTATAGAATAACCCAAGAGATTATAAAAAAAGCAAACTATTCTATCCAAATTAAAACAGGAGCTATAAATCACGAGATACTTCCACAAGTATACTTCAATGGTGAAGATGAAGAGTCTATAAAAATGGCCAGAGCTTTTCAAGCACCTGTAATTACCGCGGTAAAT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT17_H_LU;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 208695 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 209266 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 210830 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 212331 . GATGGTATCAAAAATATATAGCGATAATCCAGTACATGCAAAAAGTGGTATGACAATGTTTTATATATCTATTAATTTGGGTAGCTTACTAGCCTATTTAGTAGCTCCTTCATTAATTGGATATCAATTTGGTGCTTTAGCAGTGTTAAGTGTAGTTTTTATTG G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 212495 . G T . . NS=1;RF=0.967;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 212494 . GG G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 212495 . GTAAATTATTAGCAATAATAAATTTTTCGTATAGATATAAGATTTATGAAAACGTTGTTGATGAAATTGATAAAAAGCCAATGACAAGTATAGCTAAGAAAGTTGTTTTAGGATATCTAGCTATAGTATATGTTTTTATAGTAATTTGTTATCACTATCCAGACTATGCAAATGTAGTTGTGGCAGTTATTAGTATGTTTTGTTTGCTATTATTTTTATTAAGAACAATATTTTTCTTAAAAGATGATGTACGTATTAAGCAAATAGTTGGTTTGATATTAATAGTCGTAGCTGTAGTATTTTTTGTTATTTACAATCAAATGGAATCTACTCTTGTCATGGCAGCAAAGAATAATTCAGATCTTTTAATGTTTGGTTTTAAAGTTAATGCTGCGAGCTATCAGATAGTTAACCCAATTTTGATAATATTTGGTGGTATGCTTTTAATAAGGATATATCCAATGTTTCCGAGATTTTATATACCATATCAATTTGCTGTAGGAGTATTATTAGCAGCTGCAGGTTTATTCATAATGTATTATGGCTTCTCTATAGACAACAATGGTATTGTAAGTGGTAATTACATTACATTATCTTATGTCCTAATTTCTATTTCAGAATTATTTGTAAGTGCTATTGGACTTAGT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 213188 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 213411 . AATGCAAAAAAATTATAATACTCTATCCGCACCTTTCTGGATTGTCTGGGGTATAGAGTTCTGGGAAAGGTTTGGATTTTATGGCTTTCAAGCAATTATCGCGCTGTATTTTACACAGAAACTTGGGCTAAGTGAAAGAGAAACTATTTATCTG A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 216457 . G C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 219081 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT32_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 219543 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 219963 . GTTGGGTTATAAAAAGGCAGTGATTTATGGTGCTGTACTT G . . NS=1;VF=0.836;SB=1.000;VARSEQ=FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT28_H_SG,FT30_H_SG,FT32_H_LU,FT36_H_LU,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH;SB50=8.9E-16;SB65=5.7E-10;TYPE=Deletion DP:AO 61:51 NC_009749_FT__subsp_holarctica_FTNF00200 221082 . CT GC . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT29_H_LU;SB50=1.0;SB65=1.0;TYPE=Substitution DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 221085 . TAGTTTAGCAGCTTTTGGTATGGCACTTGGATTGATATGTTTTGAGTCTGGTAAAAAACACTTCCCTAAAAGTTGTGATGAGCCTAATTTTGAGATTATGAAAAAGAATCTATTCTTAGGCTTAAATGTT T . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT29_H_LU;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 221425 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 221549 . GT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 221581 . ATGTTAACTCAACTCTTTAAAACAGAAGATCATAATCGTAGAATTGCATTTTCTATAAACTATAGCTGTATGAATATAGGTTTTGTCGGTAGCTTTATCTTAGCTGGAGTAATACAGAGCTATGGTGCTTATACTATCGCATTTTATACAGCTGCTGGATGCTTAGCACTGACAGTAATTTTACATCTACTAAATTTTAAAAACGTTGAGGATAAAGATACATTTTTCCATAATCAGTTTTCAAAGTCTAATGCTCGTTTTTTAGTAGCTCCAGGAATAATCTTAGTATGCTTTTTATTTTCAATATTTCTAATTAGACATGCGGAATTTGGTAGCAATCTTGTTATATACGTATTTATCTTAGTATTTATATATTTAGCTTTTATCGCTTTAAAACAAGAACCAGAGTATAGAGAACGCATAATTGCCTTTATGCTACTAAGTTCGGCATGTATGATTTTTGCATTTGTACAAGGTATGCAAAGCTCAGCATTAGAAAATTTTGTTGAGTTTAATACAAACAAGTCTTTATTTGGCATAACTATGGAGCCAGCAACTGTCAACACTTTTGAAAGTTTAGGTGTAATTATTTTTGGTTTCTTGTTAGCAATATTGTCAAAACGAAGACTAAAAAATAGTACTACACTCCCACCAGGTAGCTTAATCACTAGAGGTATTGGCTTATATATAATAGCTTTTATGATGATACCAATAGGAATATTATTAGCCAATAAAAATACTGGTACTGTTAATGTTATCTTTCCATACTGTTAA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 222354 . AATGGGCTTTAAAATTGCAGATATAGAAATCGAAAATAATGTTGTACTTGCACCAATGGCGGGTTTCTGTGATAGTGCATTTCGTACTATATGCAAAGAGTATGGGGCTGGTATGATATATATGGAGATGGTTAGTAATAAAGCCGTAGTAGAGCGTAATTGGGAAACCATGGAAATGCTCTATATGGAAAATAGTGAAAAGCCACTTGGTATACAGATATTTGGTACAGATATTGATAGTTTTGTTGGTGCGACAAAATATATCGCAGAGAATACGGAGTGTGATTTTTTAGATATAAATATAGGTTGTCCTATGCCAAAAGTTGCTAAGAAGTTACAAGCTGGAGCGGCACTTCTAAAAGATGTTAATAGAATCCATGAGATACTAACAGCTGTAGTAAAAGCAGTACATAAACCAGTAACCGTAAAGATGCGTATTGGTTGGGATGAACAAAATATCAATGCTATAGAGGTTGCTAAAGCATGTCAAGATGCAGGTGTAAGTGCTATTGCGATACATGGGCGCACGAGAGAGCAA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT7_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 227438 . A AT . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Insertion(tandemrepeat) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 227477 . AGAAGTATCATGCTACAGTTATAGATATGCGTTTTGTCAAACCACTTGATAAAATTATGCTTGATAAAGTATCTCAAACTCACGAGATAATATTAACTTTAGAAGAGAATTGTATAGCTGGGGGCGCAGGTTCTGCTGTTAATGAATATTTTGTAGCTAAAGATCTTAGCAATAAAATAATAGTTAGAAATTTTGGACTTCAAGATAAATTTCTCAATCATGGTACAAAAGATTTATTATTAGCTCAAAGTAAGCTTTGTGTTGAAAATATATCTAAAGAGTTAGATAAACTAATTTAA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 228517 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 230813 . C A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT60_A_JU;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 232276 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 232331 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT66_A_SG;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 233616 . T C . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT26_H_VD;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 234322 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 235114 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 236880 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 237488 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT54_T_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 237707 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 238600 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT29_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 238894 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 242489 . TAAA T . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 248007 . AATGATAAAAGTAATGACTTTTAATGCCAATGGTATACGTGCAGCTGCTCGTAAAGGATTTTGGGAGTGGTTTAAAACTCAAGATGTAGATTTTTTGTGTATGCAAGAAACAAAAGCCCAATTTCATCAATTAGAGAAAGACATAGAACACTTCCCTACTGGTTACTATTATGAATTTAAAGATGCTGTAAAAAAAGGTTATAGCGGTACAGCTATCTACGCCAAGAAAAAACCTCTAAAAGTAATCAAAGAGCTTGGATTAGATTGGGCAGATGATGAAGGTCGTTATATTCAATTTGATTATGAAAATTTTAGTATTGCTAGTTTATAT A . . NS=1;VF=0.033;SB=1.000;VARSEQ=FT39_T_ZH,FT8_H_AG;SB50=0.50;SB65=0.85;TYPE=Deletion DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 248337 . TTTGCCAAGTGGCTCTAGTGGAGATGTTCGCCAAGAGTATAAGATGCAGTTTCTTAAAAAATACAAAGAAATATTAAAAGAACAAGTTGAATCTGGTAGAGACTTTATAGTTTGTGGTGATTTTAATATT T . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 249325 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 251272 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 252802 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 254771 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 256858 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT10_A_JU,FT13_A_BS,FT20_H_JU,FT60_A_JU,FT68_A_SO,FT8_H_AG;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 257131 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 258532 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT71_A_BS;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 261432 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 262855 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 263007 . GATGACAGAGTTAGAGAAAAAGTTTGAAGAAATGCTGATAGCCGTTCGTGATGCGACTATTGATTTCAAACCTGATAATAGCCAAAAGCTAAAACTTTACGCTTTTTATAAACAAGTAAAAGAAGGTGATAATAATACAAAAAAACCTTCTGCTTTGAAAATGGTTGAACGCGCTAAGTGGATGGCTTGGGATGCGATTAAAGGCATGTCAAAAGAAGATGCTATGCGTGGTTATCTAAGGGTTTTTGGCGAGGAGTATCTTCCGGCGGGAGAAAGTGATAATGATAGTCCTAGTAGCACTATCGCAAGTAAATTAGAACCTGTAGAAAGTAAATCACAGCGTAAAGCTATTGATAAAATTGCAGTTCTTGGTGCTGGAACTATGGGAGCACAAATTGCTGCTCACTTTGCAAATGCTAAATTCCCTGTTGTTTTATTTGATTTAAAATCCCAACAAGGTAGTGCTAATGTTATTATTGAAGATTCTCTAGCCAAGCTCACCAAACTTAATCCTGCCCCTTTTGGTTCAAAAGATTCAATAAAATACATTACTCCAGCAAATTATGAAGATAATCTTGAGCTTCTAGCAGACTGTGATTTAATCATAGAAGCAGTAGCCGAACGTATAGATATCAAAGAAAGCCTCTACACAAAAATCTCTAGTCATATCAAAGAAAATGCAATTTTAGCATCAAATACTTCTGGCTTGAGTATCACAAAACTAGCACAAGTATTACCAGAGAATCTCAAAGTTAATTTCTGTGGTGTACACTTTTTTAACCCACCGCGCTATATGCCTTTAGTTGAGCTAATCCCTCATGCAGATACTAATTCTGAAATTTTGGATAAACTAGAAACATTCTTAGTTGAAAAACTTGGTAAAAGTATAATTCGCGCAAAAGATACACCAAATTTTATCGCTAATAGATTAGGTGTCTTTTCAATGCTAGTAACTTGTTACTATACAGAGCAGATGAATATTCCTTTAGAAGTTGTTGATGAACTTACAGGCAAAAAACTAGGTCGTGCAAAAAGTGCTACTTATAGAACTGCTGATTTGGTTGGTTTAGATGTGTTATCTCATGTTGTTGAAACTATGAAAGATAATCTCGAAGATGGTTGGCAAAAGCTATACAACACACCCAACTGGATTCAGAATCTAATCAATAATGGTTCACTTGGTCAAAAGACTAAAAAAGGCTTATATATCAAAGCATCTGATGGTATCAAAGTACTTGACTTAGGTACTAATGAATATCGCTCTGCTGATAAAAAAGCTGATAAAGAAATCTTAGATATACTAGCTGAGAGAGATTGGAGCAAAAAACTGGAAGGTCTGCGTAATAGCGATAATCATCAAGCTCAATTCTTATGGGCAACTTTTAGAGAG G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 264682 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 264981 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 272399 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 272598 . GATGGTTACCTTAGATGGTAGAGAAATTTATCATTACAT G . . NS=1;VF=0.066;SB=1.000;VARSEQ=FT38_T_ZH,FT42_T_ZH,FT45_T_ZH,FT46_T_ZH;SB50=0.13;SB65=0.36;TYPE=Deletion DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 272637 . G T . . NS=1;RF=0.836;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 272636 . TG T . . NS=1;VF=0.066;SB=1.000;VARSEQ=FT38_T_ZH,FT42_T_ZH,FT45_T_ZH,FT46_T_ZH;SB50=0.13;SB65=0.36;TYPE=Deletion(tandemrepeat) DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 272637 . GGG G . . NS=1;VF=0.066;SB=1.000;VARSEQ=FT38_T_ZH,FT42_T_ZH,FT45_T_ZH,FT46_T_ZH;SB50=0.13;SB65=0.36;TYPE=Deletion DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 272658 . C CTA . . NS=1;VF=0.066;SB=1.000;VARSEQ=FT38_T_ZH,FT42_T_ZH,FT45_T_ZH,FT46_T_ZH;SB50=0.13;SB65=0.36;TYPE=Insertion(tandemrepeat) DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 275199 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 275472 . AATGATTTTAATCGATGGTAAGTCTCTCTCAAAAGACCTTAAAGAGAGATTAGCAACTCAAGTTCAAGAATATAAGCATCATACAGCAATCACCCCAAAACTTGTCGCAATAATTGTTGGTAATGATCCGGCAAGTAAGACATATGTTGCCTCAAAAGAAAAAGCCTGTGCCCAAGTTGGTATAGATTCTCAAGTGATTACACTACCAGAGCATACTACAGAATCAGAACTTTTGGAGCTGATCGATCAGCTAAATAATGACTCTAGTGTTCATGCGATTTTAGTGCAGCTACCATTACCAGCACATATCAACAAAAACAATGTGATATATAGTATAAAACCAGAAAAAGATGTCGATGGTTTTCATCCTACAAATGTTGGTAGACTACAACTTAGAGATAAAAAATGCTTAGAATCTTGTACACCTAAAGGTATCATGACTATGCTAAGAGAGTATGGTATAAAAACAGAGGGGGCCTATGTAGTGGTTGTCGGCGCAAGTAATGTTGTTGGTAAACCAGTATCACAA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 276097 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT24_H_ZH;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 277633 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 287934 . T C . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT22_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 292243 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 292635 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT71_A_BS;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 294105 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 294999 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 297620 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 298758 . A AATGGCATTACATGGTAAAAAAGATACAATTGATAACCTTGATTTTTTTGAACAATCTTTACCAAAGTTTAAACTTCCACTAAATTCACAAGATCCTTTAGAAGTGTATCAAGAAATCAAAGATGAGTTAATGCTAGATGGTAATTCGAAGCAAAATTTAGAGACGTTTTGCCAAACGGAAGTTG . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 298804 . T TGA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 299694 . ATTGATATATCTGAGAGTTCGCGCTAAAGGTTGGCAAATAGCAGCTTACACA A . . NS=1;VF=0.164;SB=1.000;VARSEQ=FT20_H_JU,FT33_H_BL,FT36_H_LU,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT65_A_SO,FT66_A_SG,FT70_A_SO;SB50=0.0020;SB65=0.027;TYPE=Deletion DP:AO 61:10 NC_009749_FT__subsp_holarctica_FTNF00200 300310 . GTAGTTT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 301644 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 302922 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 303936 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 304259 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 304581 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 305184 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 305397 . AATGCAGGTAGGTGTTAATGATAGGTTTGTAGATAAAACTGTAAACTGTGGAAATATAGCTTCTTCAATAGCTCCTTTTGCGGTAAATTCAAAAATAATTAATATCGAAGATGATTTATCATCAGCCACTTTGAAAGTTAAGAATATAAATACTAATGTGATTTTCGAAACAAAAATATGTGTGAAAAACGGTAGCTATTTGCCAGATGGTGATATGTCTATAGATGGAGTCAACAATACTTATTCTCCGCTAGAGTTAAATTTTTTTAATCCAGTCGGTGCAAAGACAGGAAAACTTCTACCTACAGGTAATGTGGTGGATAATATAGATGGAATAGATGTGTCATGTACTGATGTG A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT49_H_FR;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 305755 . G T . . NS=1;RF=0.967;VF=0.016;SB=1.000;VARSEQ=FT30_H_SG;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 305754 . GG G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT49_H_FR;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 305755 . GCAGTTCCTATGATTATTATTGATTCTACTAAATTTGATAAAACAGGGAAGGAGCCAAAAGATCTTCTATATGAAGATAAAGAGCTTTTAAGAAAAATAGAAAAGATAAGAAAAAAAGCATCATATCTT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT49_H_FR;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 306252 . AATGGAAAGCTTTTTAAAAGGTAGTATTTATAGGGGAGGCACTTCTAAAGCTCTTTTATTAAATAAAGAAGATTTATCAAATTATCAATTAAATCATATAGATGATATTGTTATTAGTATT A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 306400 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT59_A_FR;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 309772 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT71_A_BS;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 310806 . G GATGCAAACTGAAAAAATAAATTTT . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Insertion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 311067 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 311290 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 314849 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 315945 . C CGGT . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 321638 . G T . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT18_H_NW,FT36_H_LU,FT48_H_LU;SB50=0.25;SB65=0.55;TYPE=SNP(transversion) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 321657 . G GTGGCAATTT . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 322238 . A G . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT68_A_SO;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 323970 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 325245 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT10_A_JU,FT13_A_BS,FT20_H_JU,FT60_A_JU,FT68_A_SO,FT8_H_AG;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 326591 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 328506 . AATGCTGAAAACTCCTCTTTATGAATCACATATAGCAGCAAATGCTAAGATGATTGATTTCTCAGGCTGGTCAATGCCAATTAACTATGGTTCACAAATTCAAGAGCATAATAATGTTAGAGAAGATTGTGGTATTTTTGATGTATCACATATGTTAGCAGTTGATATTCAAGGTTCTGAAGCTGAGAAGTTTTTACGCTATCTTTTAGCCAATGATGTTGCTAAATTACAGGAGAATAAAGCTCAATATGGCTGT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 331104 . G T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 331123 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 331353 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 331955 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 336083 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 336324 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 338332 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 340990 . G T . . NS=1;RF=0.934;VF=0.066;SB=1.000;VARSEQ=FT18_H_NW,FT36_H_LU,FT48_H_LU,FT57_A_BE;SB50=0.13;SB65=0.36;TYPE=SNP(transversion) DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 354048 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 356225 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 361092 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 366341 . C T . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT29_H_LU,FT66_A_SG;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 376191 . A G . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT65_A_SO,FT70_A_SO;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 378381 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT45_T_ZH;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 382245 . AATGAAAAGTTTCAGAAAAATACAA A . . NS=1;VF=0.295;SB=1.000;VARSEQ=FT13_A_BS,FT17_H_LU,FT18_H_NW,FT29_H_LU,FT33_H_BL,FT36_H_LU,FT44_T_ZH,FT46_T_ZH,FT48_H_LU,FT54_T_LU,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT70_A_SO,FT75_H_ZH;SB50=0.0000076;SB65=0.00086;TYPE=Deletion DP:AO 61:18 NC_009749_FT__subsp_holarctica_FTNF00200 382402 . G GTACTTATTGCTGATAGTTTTAAATACAAACTAGACTCTCAAGGAAATCCTAAAACAGCTCCTGTTAAAATATTTGCAACTGAGGATGGTAATAATAGAGGTTTTACAAACTTTATTTATGATGGTATTACCTCGGGCTCTAAAGATAGTGGAGCAGTAGCTATTATTGCTTTTTTGCTAATTATTGGTGGTTCTTTTGGTGTACTTCTTCGCACAAAAGTTATTGATCAATCAATAATTAGAGTTGTAAACAAGTTCCAAAATAACAAAATTGTTC . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 388285 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 391869 . AATGAACATACTACAGCGAATACAAAATGGTGAAGATAGTTACACGCAATTTAAACAAGATATAAATAATGCTGATAGTCTTGCACAAGAGCTTGTTGCTTTTTCAAATGCTAATGGCGGTATTTTAATCATTGGTGTTGCTGATGATGGTAAAATTATCGGATTATCAAAAGATGATATTCATAGGATAAATCAGCTTATAAGTAATGTTTGCAGTACAAATATAAAACCACCAATAAGCGTACTAACAAAGATAGAGAATATAGATGATAAAGAAATACTTATAATAGAAATAAACAATGGAGTAAATAAACCATATAGTACTAACAAAGGAGTATATTTGACAAAAGTTGGTAGTGATAAAAGAAAAATGTCTCAAGAAGAGCTAGGTAGACTTTTTAGACAGGCTCCAAAACTGTATCCTGATGAAGAAGTGCTATATAAAACATCGCTAGAAAACTTTGATGTTTCAAAGTTTAGAAAGTTTCTAAAAACAGATAACTATACTACATTTTCAAAACTAGAGAATGGTAGTCTAGATTTATCAACTATTCTAGAAAATAAAGATTTAGCAAAAGATGGCAAACTAACTTTAGCCGGTAATCTTATATTTGGAGAAGAGCCACAGCGGTTTTGTCCAAGCTTTTATATAGACTGCTGTTATTTTGATGGTAATGATATTTCTGTATCGAAATTTATATCTAAAAAAGTTATCAAAGGAACATTTTCTGAACTATATGAAGATACCATGAGATTTTTGCTTAGTCAGTTAAAAAGTTATCAAATAGATTTAGATTTTAACTCAAACCCACAATTAGAGGTAAATGAATCTGCACTAACAGAGATAGTTGTAAATGCACTTGTGCATAGAGACTATTATATAAACTCTTCTATAAAGGTTTTTATATTTCATAACCGTGTTGAGATTATTAGCCCTGGTAAATTACCTGACACTTTAACAGTAGATAAGATTAAAAATGGCATAGCAATTCAGCGAAACCCTATCTTAGCCTCAATATGCAAAACATTATTACCTTATACAGGTTATGGTAGTGGAATCAAAAGAGCTATTGAGCTAATTCCTAATATTGAATTTATAAATGATATAGATAGTGAACAGTTTAGATGTATTATAAAAAGAGAT A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT10_A_JU,FT17_H_LU,FT29_H_LU,FT31_H_BE,FT7_H_AG,FT8_H_AG;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 393012 . T TGAAAGTTCACCAAAAGAGCAA . . NS=1;VF=0.033;SB=1.000;VARSEQ=FT36_H_LU,FT57_A_BE;SB50=0.50;SB65=0.85;TYPE=Insertion(tandemrepeat) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 393012 . T TGAAAGTTCACCAAAAGAGCAA . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT18_H_NW,FT36_H_LU,FT57_A_BE;SB50=0.25;SB65=0.55;TYPE=Insertion(tandemrepeat) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 393012 . T TGAAAGTTCACCAAAAGAGCAA . . NS=1;VF=0.131;SB=1.000;VARSEQ=FT14_A_BS,FT18_H_NW,FT36_H_LU,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT57_A_BE,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.0078;SB65=0.064;TYPE=Insertion(tandemrepeat) DP:AO 61:8 NC_009749_FT__subsp_holarctica_FTNF00200 393012 . TGAAAGTTCACCAAAAGAGCAA T . . NS=1;VF=0.672;SB=1.000;VARSEQ=FT10_A_JU,FT17_H_LU,FT20_H_JU,FT24_H_ZH,FT26_H_VD,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT55_A_ZH,FT56_A_AG,FT58_A_SO,FT59_A_FR,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT7_H_AG,FT8_H_AG;SB50=9.1E-13;SB65=4.3E-8;TYPE=Deletion(tandemrepeat) DP:AO 61:41 NC_009749_FT__subsp_holarctica_FTNF00200 393033 . AGAAAGTTCACCAAAAGAGCAAGAAAGTTCACCAAAAGAGCAAGAAAGTTCACCAATAAATATAAGTTATGGTGTTGGCAGTTCACCAAAAACAGATAAGCAGATTTTAGAA A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT10_A_JU,FT17_H_LU,FT29_H_LU,FT31_H_BE,FT7_H_AG,FT8_H_AG;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 400087 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 404662 . ATAATG A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 404721 . G GCATCCCATAATTTCAAAGATATGTCACTTAATTTTGACTATTATCCAAGAACTGGCGATGACTCAAGTAACTTTGAAGTCTATCTAGGCGATCAACTAATTTATACACACAATAATTTCTCACAAGAATGGCAAAAAATAAGTATAGATCTGAGTAATGTTGAAAATGCAGAATCTTCGAAACTTTCAATACGAGAAGCTGGTAGAGATGAAAGCTACGGTGCGCTTATTGATCTAAATTCTTTAAAAATCACTCCCGGAAAAATTGTTTAA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 410412 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 417486 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 422256 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 431922 . T C . . NS=1;RF=0.738;VF=0.262;SB=1.000;VARSEQ=FT10_A_JU,FT13_A_BS,FT14_A_BS,FT17_H_LU,FT20_H_JU,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT31_H_BE,FT60_A_JU,FT65_A_SO,FT66_A_SG,FT68_A_SO,FT70_A_SO,FT8_H_AG,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.000031;SB65=0.0020;TYPE=SNP(transition) DP:AO 61:16 NC_009749_FT__subsp_holarctica_FTNF00200 432924 . A AGTGTACATAAAAAAA . . NS=1;VF=0.180;SB=1.000;VARSEQ=FT33_H_BL,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT55_A_ZH,FT58_A_SO,FT59_A_FR,FT64_A_ZH,FT66_A_SG,FT67_A_GE,FT70_A_SO;SB50=0.00098;SB65=0.018;TYPE=Insertion DP:AO 61:11 NC_009749_FT__subsp_holarctica_FTNF00200 432924 . AGTGTCTTTTAAAATTTTATATTTATATTTACTAGCTTTTTGTATTATTTTTAGTTTAGAATTTAAATTTGCTATATTGAATATTATAGTTTATCTTCCGGCTTGTATTTTGGGTTTTTTAGCTCTTAAAAAACTATTTGTCGGAAATATTGTTAAGAAACAATTAGCTTTCCTTTTTTTCTTTTTCTTTTTATCAATGATTTATTTAATAATAGTCCAAATAATCTTACTTGATGCAGCATCATTGTTTCCTCAGTTTTTATTTAACATTTTGATCGCGATAGGTTTTTGTAACTTTATTTTTGTTTCATATGATAATAATGAAAATTATTTTTTTAATATGTCTAAAATAATATTTTTTGTTACTTTCTTACAATCTATTTTTGTATTTCTTTCAAGGTATTATATATTTTTAAATGATTGGATATTCTTTTTTTTAGTGAAAAAAGGGAATATTGAGATTTCGAATGTTATTGAATATAAGTTAAGAGTATTCGGACTTAGTAACGCTGGAGGGGATGGTTTAGGATTTTCAATTACTATAGGATTATGTTTTTCTATATTTTATTTTATCAAATATATTAAAGGTAAATCTATATTTACCAAACTTATGCTGTTTGTACCTTTAATTCTTATTGTGTTTTCTAATATTTTCATATCTAGAACATCACTCTTAACTTCTTCACTTATATTGTTAATAACAATATTTTATATATATATTAAAAAAGAAAAATTACTGTTTATTATAATA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 437787 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 450438 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 451887 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 462165 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 463788 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT25_H_BE;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 470709 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 475194 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 479901 . A G . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT65_A_SO;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 481272 . C T . . NS=1;RF=0.934;VF=0.066;SB=1.000;VARSEQ=FT18_H_NW,FT36_H_LU,FT48_H_LU,FT57_A_BE;SB50=0.13;SB65=0.36;TYPE=SNP(transition) DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 483135 . AATGAGTAAAATTATTAAAGAAGTAGTTGATAAAAATGTAATTGAAGGAACTAGATATTTTATATCTTTGGTTGAATTAGGCTCATATACTGCTGTCAAGAATCTTTATTCTGTCGAGATTAATACAGTCAGAAGTAAG A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 488643 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 493287 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 497064 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 503508 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 504493 . ATTTTT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 504542 . AAAATATTTACTTTTTTCTTGTTCCTTTTATCTTAGGTGGAATAGTAATGTTTAGTGCGCCTGGTAGTTATCACATAACAGAAACGCGTCTGCACGATTCTCCTTTTGAACTCTTGATAAAGAATTTCTGGAAATATATTTTTATGATTTTCACAGAATTTGAGCTATCCCCTTTATTCATTTTAGCTGTATTAACTGTGATAAAATTTGAAAATAGTAAACCAAAAAAAATAATAACTATTCTTTGTTTATTTTTAGTCTGGCTAACTATTTATCCAATATGCTTTCAATTTACTAGAAGAGTAGCTCTGATTTATATGTTTTTTTACTTCTCTATAATCTCATACTACATCTATAATTATTCTAGTAAAATTAATGGGATTTTGACTAAGAATTACAAGATATTTTGTTTTGGTGGTTTAATAATAGTAGGATTATTTTTATATATTTTCGGTAAATACCATTATTATCAAATAGCAAGACTCCATAAAATTCAATACTATAGAAACCTAGGACAACAAAATATCTCTCTTGAACCTATTAAATTTACAGGAATACAATTAATTAAAGTAGAAGATATTCATGAAGATCCGAATGAATACGCTAATACAGTATTTGCTAAGGCATATGGTTTTAATAAAGTTACTGTATCAAAAAGCTAA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 507018 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 507315 . ATTGGGCGATGTATATTTCTTTTATCAT A . . NS=1;VF=0.852;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT30_H_SG,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT68_A_SO,FT69_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=4.4E-16;SB65=3.7E-10;TYPE=Deletion DP:AO 61:52 NC_009749_FT__subsp_holarctica_FTNF00200 507342 . TGTGAATCTTTTTTTACAAATACCTATAACTAATTATCTAGATACAGTAAAATATTTAACAATAATATATAAAATAAAATTAATTTCT T . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT10_A_JU;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 507620 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 507909 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 507910 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 517623 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 522501 . A G . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 537508 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 537510 . G GTCAGATATGTCTAGCCAACTAGCACAGAACTTTAATCCAAACGACCCTGATCAACTGATTCATAATAGTACATACGCAAATATATTATTACAAGCTGGTCAAGGTGGCCCTTATCAGATTAACGACTACTCAAAAAGACTGCCTTCAGCTGAAGCTAAAGGAGCTCTTGGTCTTGTAAATTACAATGCAGTAGCCGCAATATTAGGCTATTCAATACAAGATCAAGATGATGGTTCACAGACAAAAAAATAG . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 539235 . A G . . NS=1;RF=0.738;VF=0.262;SB=1.000;VARSEQ=FT10_A_JU,FT13_A_BS,FT14_A_BS,FT17_H_LU,FT20_H_JU,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT31_H_BE,FT60_A_JU,FT65_A_SO,FT66_A_SG,FT68_A_SO,FT70_A_SO,FT8_H_AG,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.000031;SB65=0.0020;TYPE=SNP(transition) DP:AO 61:16 NC_009749_FT__subsp_holarctica_FTNF00200 541032 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 541467 . AATGAAAAAAAAAATTATAGTTTTC A . . NS=1;VF=0.066;SB=1.000;VARSEQ=FT18_H_NW,FT36_H_LU,FT48_H_LU,FT57_A_BE;SB50=0.13;SB65=0.36;TYPE=Deletion DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 541648 . AT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 541665 . A ATTATCCTTAA . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Insertion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 548562 . C A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT29_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 553626 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 561762 . G GATGAGAAAAATATTCTTTTTTTTAATTCCAATAATACTATTATCTAGCTGCTCAACTAGCAATTACACTCTAATCAAAGGTAGTGAATATATATCT . . NS=1;VF=0.967;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG,NC_019537_FT__subsp_holarctica_F92,NC_019551_FT__subsp_holarctica_FSC200;SB50=3.5E-18;SB65=1.8E-11;TYPE=Insertion DP:AO 61:59 NC_009749_FT__subsp_holarctica_FTNF00200 562366 . C CA . . NS=1;VF=0.066;SB=1.000;VARSEQ=FT38_T_ZH,FT42_T_ZH,FT45_T_ZH,FT46_T_ZH;SB50=0.13;SB65=0.36;TYPE=Insertion(tandemrepeat) DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 562449 . A AGCGACCTTTTACAAAAATTAATAGCCAAACTCTATAGTATATGA . . NS=1;VF=0.066;SB=1.000;VARSEQ=FT38_T_ZH,FT42_T_ZH,FT45_T_ZH,FT46_T_ZH;SB50=0.13;SB65=0.36;TYPE=Insertion DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 565785 . C A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT41_T_BL;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 568899 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 571395 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 571434 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 571785 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 574023 . G GGTGATATTTATAATTCTACTTGATATATTCCTACAGACGCTTTTCTGT . . NS=1;VF=0.066;SB=1.000;VARSEQ=FT10_A_JU,FT14_A_BS,FT28_H_SG,FT7_H_AG;SB50=0.13;SB65=0.36;TYPE=Insertion DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 574023 . GGTGATTATTTTAGCATTCTATCATCCG G . . NS=1;VF=0.902;SB=1.000;VARSEQ=FT11_A_JU,FT13_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT8_H_AG;SB50=5.6E-17;SB65=1.0E-10;TYPE=Deletion DP:AO 61:55 NC_009749_FT__subsp_holarctica_FTNF00200 577015 . T TATA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 577414 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 581005 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT31_H_BE;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 581328 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT41_T_BL;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 581657 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 581913 . T C . . NS=1;RF=0.918;VF=0.082;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO;SB50=0.063;SB65=0.23;TYPE=SNP(transition) DP:AO 61:5 NC_009749_FT__subsp_holarctica_FTNF00200 582011 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 582342 . GATGGAAAAGATTAGTCATAAAGATATACAAGATAAATTATGGAGTAATGAAGATGAAAGTAATTTATCAAATGAGCAATATAATTCACTACTAATTGAACAGTATAGAATCTATGTTGAATTAACAGACAGAACTAGCTATAGAAGGATTGTTATTAACCTATTCTTTTTGGTTTTTAACCTTGTTCTAGTCGGAGTTGTTGCCTTAGCTATTAGTAACAACATTAATGTCGAAAATCCTCCATCTAGTATACTT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 583468 . G T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT22_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 584643 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 585037 . G T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT70_A_SO;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 586489 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT67_A_GE;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 586936 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT59_A_FR;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 588026 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 589718 . A AACAGCC . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Insertion(tandemrepeat) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 589718 . AACAGCC A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion(tandemrepeat) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 591606 . A AATGCTATCTCTT . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT7_H_AG;SB50=1.0;SB65=1.0;TYPE=Insertion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 591606 . AATGTGTTTAACAAAATACTCTCGGATTAACTATATTAAGCTATTCTCTAGAACAGCTATAGTATTGTTTATCTATCTAATCATTAATCTAGTAATAGCTTTTCGATTTACT A . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT10_A_JU,FT17_H_LU,FT8_H_AG;SB50=0.25;SB65=0.55;TYPE=Deletion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 592597 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 593119 . T A . . NS=1;VF=1.000;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG,NC_019537_FT__subsp_holarctica_F92,NC_019551_FT__subsp_holarctica_FSC200;SB50=8.7E-19;SB65=7.7E-12;TYPE=SNP(transversion) DP:AO 61:61 NC_009749_FT__subsp_holarctica_FTNF00200 593120 . A ATAACGATAGAATGGATCTTGAGTCTGAAGTAATTAAAATAAAAAAACAATATAATGCGAAGATATGTGCTTTGCAGGAAGAATATAATTCGGTAAAATCTAATAACAACATTGAGTTAGCTAAAATTAGAGAAAACTA . . NS=1;VF=1.000;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG,NC_019537_FT__subsp_holarctica_F92,NC_019551_FT__subsp_holarctica_FSC200;SB50=8.7E-19;SB65=7.7E-12;TYPE=Insertion DP:AO 61:61 NC_009749_FT__subsp_holarctica_FTNF00200 593655 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 594013 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 594843 . G GATGTGGTCAACCGCTTTTATCGGAATTCGTTATTTAATGTTAAACGGATTTAGTGCTAGGGGATTATCATTAACTAGATATGCGATAGCAAGTATGGTGATGCTGATAATATTTATTAGACAAAAAAATAAAACTCCACCTAGTTTAAAAGATTTATTTAGGTTTGCAATTTTAGGTTTTTTTGGCTTTTTTGCATATAACGTATTTCTAAATTCTGGTGAGTCAAGAATCACTGCAGCAGGCGCAAACTTTATCATCTCTCAAGCACCAATTATTGTAGCAATATTAGCATTTGTGTTTTGGGGTGAGAAAATCAACAAATATGGTATCTTTGGTTTTGTTATAGCTATAATAGGTGCCACAATAATTTTTTTCTCAAAAAATGATACATCATTTGAATTTATAGGAATTTGTCTAGTTTATGGTGCTTGTTTTTCAGGAGCTATTTATTCAGTTTTCCAAAAAAGCTTATTTATAAAATTTCATCCAATTGAGGCTATAACTTATTGTATTTGGTTTGGGACGATT . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 596057 . T C . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT27_H_SG,FT28_H_SG;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 597205 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 597300 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 598452 . T TAGG . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT22_H_LU;SB50=1.0;SB65=1.0;TYPE=Insertion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 599590 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT26_H_VD;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 600462 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 601991 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 602497 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 603430 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 603854 . G GTTA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion(tandemrepeat) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 605228 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 605921 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 606217 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 608158 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 608659 . T A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT39_T_ZH;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 609097 . G A . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT65_A_SO,FT70_A_SO;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 609797 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 610037 . C T . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT42_T_ZH,FT46_T_ZH;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 610543 . T C . . NS=1;RF=0.738;VF=0.262;SB=1.000;VARSEQ=FT10_A_JU,FT13_A_BS,FT14_A_BS,FT17_H_LU,FT20_H_JU,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT31_H_BE,FT60_A_JU,FT65_A_SO,FT66_A_SG,FT68_A_SO,FT70_A_SO,FT8_H_AG,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.000031;SB65=0.0020;TYPE=SNP(transition) DP:AO 61:16 NC_009749_FT__subsp_holarctica_FTNF00200 611158 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 611382 . C A . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT20_H_JU,FT60_A_JU;SB50=0.50;SB65=0.85;TYPE=SNP(transversion) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 612163 . TTTA T . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion(tandemrepeat) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 612445 . G T . . NS=1;RF=0.852;VF=0.148;SB=1.000;VARSEQ=FT26_H_VD,FT38_T_ZH,FT42_T_ZH,FT45_T_ZH,FT46_T_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT59_A_FR;SB50=0.0039;SB65=0.041;TYPE=SNP(transversion) DP:AO 61:9 NC_009749_FT__subsp_holarctica_FTNF00200 612771 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 613036 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 613872 . A T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 613915 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT68_A_SO;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 614552 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 614866 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT59_A_FR;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 615296 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 616150 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 616316 . T C . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 617442 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 618239 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 618531 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 618768 . C CATT . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 619078 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT50_H_SG;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 619699 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 620503 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 621708 . AGTGAATGTAACACTTGCAGAAAAAGCAAAAATAGTTCCAGAAGTTACAAAGCTCTACGGTGCTCCGTTTATTTATTTATGGGGAGATGAACTAGTTGGAGAAGCAAATATAAACTGGGAAGAATTTCAGCAGTTTGTTAAACAACAGCTTGCAAGTAAAACAGATAATCCCACAAAATATTTTAATAAAATACTAAAAGAGCATTCTAATAAAACTTTAGAAGAATTTGCCAACCAAAAATGGATTTATACATCTTTAAAAGCAGATGTTGACAATGCACTTAAATTATTA A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 623237 . C A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT41_T_BL;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 623649 . AATGACTGATACAAAACATTTTGATACTATTATAATTGGTGCTGGAATTTCAGGTATATCTTTAGCACAACGATTAACTGCTGCATCTGTAAAAAATTGTGTCTTTGAGGCTAATAAGGTCGGCGGTTGTATTGACTCTCAACAATACGAAGATTTTTGGTTTGAGATGGGAGCACACACCATATACAACTCTTACAATAAAACTATAGAATATATCCACAGTAACTCTCTTGGAAAAGATATCCAACCAAGAAAAAAGCTACCATTCTTATTTGTTCAACCAAACAATAAAATTCAAAGTATTTTTATAAATATTAATCCATTTACAGCAGCTCTTAGTTTTTTGAAAAACAGAAAAGTCTCAAAACAAGATAAAACTGTTAGCGAAT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 624057 . C CA . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Insertion(tandemrepeat) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 625682 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 626127 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 626166 . AATGTCCTTTTATTTAGGT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 626321 . T C . . NS=1;RF=0.016;VF=0.984;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG,NC_019551_FT__subsp_holarctica_FSC200;SB50=1.7E-18;SB65=1.2E-11;TYPE=SNP(transition) DP:AO 61:60 NC_009749_FT__subsp_holarctica_FTNF00200 626323 . TGA CTTCTACCTCCAGCAATAGTTGCTAATAATACAATAGGATTTTTGATTTTAAGTAAATAG . . NS=1;VF=0.984;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG,NC_019551_FT__subsp_holarctica_FSC200;SB50=1.7E-18;SB65=1.2E-11;TYPE=Insertion DP:AO 61:60 NC_009749_FT__subsp_holarctica_FTNF00200 626566 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 628868 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 629545 . G A . . NS=1;RF=0.918;VF=0.082;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO;SB50=0.063;SB65=0.23;TYPE=SNP(transition) DP:AO 61:5 NC_009749_FT__subsp_holarctica_FTNF00200 629598 . AATGTGGTTATTAGAAAATATAGACATGAAAAAATCAAAATATATACTACCTAGTTTGTTTACTAGTGCTAGTTTATTATTTGCTTTCTTAGCAATTATAGCAGCCTTTAATGGTAATTTTGTCTCGTCTGCAGTATACATGCTTTTAGCAGGTTTTGCAGATGCATTTGATGGTAGGGTTGCTAGGTATACACACACTCAAACTGAATTTGGTGCTGCTTTAGATAGTCTTGCTGATGTGGTTTCATTTGGAGCTACTCCAGCCTTAGTTATGTATTTTTGGAGTTTGCATAATATTGGTGCTCTAGGCGCAGCTATTTCATTTTTGTACTTGCTTGCTGTAGCATTAAGATTAGCTAAATTTGATACT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 630584 . C T . . NS=1;RF=0.934;VF=0.066;SB=1.000;VARSEQ=FT24_H_ZH,FT51_H_ZH,FT55_A_ZH,FT64_A_ZH;SB50=0.13;SB65=0.36;TYPE=SNP(transition) DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 631485 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 633358 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 634535 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 635260 . G A . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT31_H_BE,FT65_A_SO,FT70_A_SO;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 636033 . G GATG . . NS=1;VF=0.967;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=3.5E-18;SB65=1.8E-11;TYPE=Insertion(tandemrepeat) DP:AO 61:59 NC_009749_FT__subsp_holarctica_FTNF00200 636431 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 636432 . G GAATCCTGGTTTAGTAATGGCATCTATACAATTTGTGATATCTCTATTTGCTGCATATTATGTTACTGTTCATGGCTTAGATAATCCTATAGCATGGTGGCTGGGTACCATAATATTTTCAATAGTTGCACATATTTTATTATTTAAACTTGTAATGACTAGAGATTAG . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 636986 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 637138 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 637736 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 637899 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 638233 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT39_T_ZH;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 638852 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 639172 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 640411 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 641283 . G T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT30_H_SG;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 642713 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 643088 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT41_T_BL;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 643814 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 646169 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT56_A_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 646215 . C A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 648436 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 648716 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 649579 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 650113 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 650725 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT59_A_FR;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 651000 . GGTG G . . NS=1;VF=1.000;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG,NC_019537_FT__subsp_holarctica_F92,NC_019551_FT__subsp_holarctica_FSC200;SB50=8.7E-19;SB65=7.7E-12;TYPE=Deletion DP:AO 61:61 NC_009749_FT__subsp_holarctica_FTNF00200 651180 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT31_H_BE;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 651859 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT26_H_VD;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 651931 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 652270 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 652948 . C T . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT52_T_LU,FT53_T_LU,FT54_T_LU;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 653665 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 653986 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 654749 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT18_H_NW;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 654854 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 654969 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 656002 . G GGTGCAGCAA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 657877 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 658683 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 658865 . G T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT24_H_ZH;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 659762 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT26_H_VD;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 659770 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 660260 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 660931 . TTTA T . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 661097 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT17_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 661313 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 661648 . A T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 663414 . AATGAAAAAACTAGTAACAGATTTACGAAACTTACCAAATAAACTTATCTATAGCATAATTATTGTATTATTTTCTGTATTTATTGTTATTTATGCTTACTTCATTTTATCTTGGAGTATCGGTATGAATACAGAGCTTGCAACCTATGGTTTAGGTAATAGTGAGTATTTATATCCATTACATACCCAGTACTTTCTTTTAGACAGACCAACCTTAGCAATTATAACTTATGTTTTAGGACAAGTTGCTATTCCATATTTTACTTTACTGATAAGT A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 663942 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 664313 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 665396 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 665488 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 665683 . C T . . NS=1;RF=0.852;VF=0.148;SB=1.000;VARSEQ=FT26_H_VD,FT38_T_ZH,FT42_T_ZH,FT45_T_ZH,FT46_T_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT59_A_FR;SB50=0.0039;SB65=0.041;TYPE=SNP(transition) DP:AO 61:9 NC_009749_FT__subsp_holarctica_FTNF00200 667265 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT17_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 667961 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT31_H_BE;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 668083 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 669080 . C T . . NS=1;RF=0.934;VF=0.066;SB=1.000;VARSEQ=FT38_T_ZH,FT42_T_ZH,FT45_T_ZH,FT46_T_ZH;SB50=0.13;SB65=0.36;TYPE=SNP(transition) DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 670314 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 670319 . TA T . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion(tandemrepeat) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 670342 . AGTGTTAATATGCTTAAAGAGTTACATATTGCACAAAGAGAACTCAAGAATGGTATGAGTATTAACGATTTGTATCAAAAAACTTTAGTAGCAGATTATGACAAAATTAAAAAAAATCTTTATGCCTTAGAAAAAGCTAATATCATTAGGATTACAGTCCAAGATATTTGCTACTTAAATTGTGATGTTTTTGATATAAGCTTATATAAAATTTACTTGGCTTTTAATCCTACAATTAATTTTAAAACTAGTTCTATTAGGAAAATTAATGTTATAAAATCTCAGCTATATAAACAACTTGATATAAAATTGTACGAGTGTTTTTAA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 670821 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 670920 . C A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT56_A_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 671424 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 672111 . A AATT . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 672526 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 673583 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 673734 . T A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 674316 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 674341 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 674595 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT70_A_SO;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 675474 . A T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT32_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 676354 . G A . . NS=1;RF=0.934;VF=0.066;SB=1.000;VARSEQ=FT14_A_BS,FT17_H_LU,FT27_H_SG,FT28_H_SG;SB50=0.13;SB65=0.36;TYPE=SNP(transition) DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 676694 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 676856 . C A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT56_A_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 677798 . G T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 679114 . C A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT32_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 679855 . G T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT56_A_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 681880 . C T . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT55_A_ZH,FT64_A_ZH;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 682180 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 682986 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 683092 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 684532 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 685108 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 685333 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 685584 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 686050 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 686361 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 686544 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 686696 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 686813 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 687059 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 687201 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 687460 . C A . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG;SB50=0.50;SB65=0.85;TYPE=SNP(transversion) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 687843 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT71_A_BS;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 688120 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 688264 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 688520 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 688760 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 689023 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 689486 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 690002 . CACAAAA C . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT56_A_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 690205 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 690498 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 690542 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 690707 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 691015 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 691223 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 691246 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 691838 . G A . . NS=1;RF=0.918;VF=0.082;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO;SB50=0.063;SB65=0.23;TYPE=SNP(transition) DP:AO 61:5 NC_009749_FT__subsp_holarctica_FTNF00200 692170 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 692221 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 692420 . C A . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT11_A_JU,FT16_A_BE;SB50=0.50;SB65=0.85;TYPE=SNP(transversion) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 692702 . ACTGTTT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 692813 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 692995 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 693185 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 693336 . GATGAGTTTTGATAACCTGCTTCTA G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 694894 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT50_H_SG;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 695091 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 695231 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 695334 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 695986 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 696013 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 696055 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 696057 . ACAAGAAAATCGCTGGATAACGATTGATGTAGACGGTAGTTTTAGTTTGAATGAAAATTTTGATCCATACGATATGCCAGAGAGGAAATTTGATTTTCCTGCTGATGCTTGGCTTGGCATTCGTGCTGGGAAACTTGATCCGCAGCATTTTTATAATGCTAAGCCAGAAAGAGGAGCTATTGTTGTGTTGTGGTCGTTGTTTTATGACTTTCATGCATTGATGAATAACGAAATTATTTATACCTATGGACCAGCTGGTGGATATGGTGGCTATGATAAGTTTAATAGTCTAACTAAAGATGAGTTTGAAAAAATTGATAACCTTGCTCGCCTTATGCAAAATCCTGATGAAAATTTTGATGAGTTAGTCAAAATTTGGGAAACTGAAAAAGATTTTAGATTGTTAATGGGTGGATTATTATAA A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 696480 . AATGTGTTTAACAAAATACTCTCGGATTAACTATAAACAACACCAAGAACAACAAATAGCTGACATAAAAGCCAATCCAAGATATGGTGAATATATTCAATGT A . . NS=1;VF=0.033;SB=1.000;VARSEQ=FT17_H_LU,FT8_H_AG;SB50=0.50;SB65=0.85;TYPE=Deletion DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 696934 . TTG AAT . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Substitution DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 696945 . T A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 696947 . TC AT . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Substitution DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 696951 . TATTACATCTACCAAT T . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 696968 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 696969 . AATGGTACTTGTTATCCATGCTATACTT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT75_H_ZH;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 697186 . T A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 697188 . A AATACTTTCAGGATTTGCATTATGA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 697288 . G T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT41_T_BL;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 697290 . AGCAATCATTAAGGAAGCC A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT41_T_BL;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 697308 . C CA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion(tandemrepeat) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 697308 . CAAAAAAATAATATTGATGCAATATTTGTCTTAG C . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT41_T_BL;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 697341 . G GGTCATCCAAGTTATTATCCAAAATTTGGTTTCAAACCAGCCACAGAATATCAGATAAAATGTGAATATGATGTCCCAGCGGATGTTTTTATGGTATTAGATTTGTCAGCTAAACTAGCTAGTTTAAAAGGACAAACTGTCTACTATGCCGAAGAGTTTGGCAAAATTTTTTAG . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 697341 . GATGCAAAATACACAGAGCTTTTTAAACATATTAATTTCG G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT10_A_JU;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 698673 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 699053 . TA T . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 699094 . ATCCTTATATTTGCTACAATTTTATCTTTGGTTTTAAATATTTTTATCGTGCCAATATATTTTTCTCTTGGTAAAATACTCGCCAGTGGCAAAAATGAAATTATTACTACAACTCTAATATATCTAATATTCTCGTCACTAATATTTGTATCTTTCTTGTATGATATTTCTATTAGTTTATAA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 699276 . AATGTCTAAATTATTAGTTGTTATCAACATGCAAAAAGGTTTTGATTGCTCTGAGGCTAGAGCTGTAATACCAAATCTTAATAAATTTTATACCTATTTTGATAATGTTAGTTTTGTGATGTTTGAAAATAGGAAGAATTCACTTTTTGAAACTCAATTAAAATGGATTGATTTTCAAAATGAAGAAGATAGAAAGCTTATTGAAGGTGTAGAGATACCACAAAATGCGCATTTTACTCATCACCATAACTATACGGTATACAATGATGAGCTTAAAGCTTTAATAAAAAAACTTAAACCAGCAAAAGTCTATCTTTCTGGTCTATTCTCAGATGTTTGTTTATTAAAAACAGCT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT17_H_LU;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 699780 . A ATTGGACTTTCACAATTTATCGGTGTGCTTAGGACCA . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT33_H_BL,FT49_H_FR,NC_019537_FT__subsp_holarctica_F92;SB50=0.25;SB65=0.55;TYPE=Insertion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 701129 . CT C . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion(tandemrepeat) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 701181 . A AACTTATTCTGTAA . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Insertion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 701355 . GTTTTTTT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 701377 . AATAAGCAGTTCAGTCCAGGGATTGAAATAGCAATATTTTATCTCAGCGAGCTTTTGAAACTAAGCATTGTAGCACTGCTGACAATATTGTTAGCAATTTATGTAAAACCGAAATTATTTTCTTACATTTTTGGTTTAGTTTTGTTACAATTAGCAGTGTGTTTTGTGCCTATATTGTTCAAAAGGGTCAGATAG A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 701571 . GGTGAATAATATAACTCAACCATTCTATACAAAATACTATGAATGCGTAGCT G . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 701794 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 701864 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT31_H_BE;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 701958 . AATGTTATTTTTTATGATAGTTTTAAAAAAACTTAAGAACTTATT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 702017 . CA C . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 702484 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 702915 . C T . . NS=1;RF=0.934;VF=0.066;SB=1.000;VARSEQ=FT24_H_ZH,FT51_H_ZH,FT55_A_ZH,FT64_A_ZH;SB50=0.13;SB65=0.36;TYPE=SNP(transition) DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 703261 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 703721 . CAA C . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT41_T_BL;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 703790 . ATGATGGTATTTACTATGCTCTAGTTAAGCTAGGGCTAATAAAGAGTTAG A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT41_T_BL;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 703839 . GATGACTAATTTTAAACTTTTAATATTATTCACACTCATTGATTTTTCAATTCTATTTTTATCTTTCAAGCTTTTTGGTAAAAAAGGAATTTATATATTTATTGTTATAAGTGTAATAGCAGCAAACATCCAAGTTAATAAAGGTGTTGCTTATGATATTGCAGGATTTCATATTATTGCAACATTAGGTAATGTA G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 704950 . GA G . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion(tandemrepeat) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 704968 . GAATATTTAAATAACTGCTTTGAGCAAGCAAAAGCACAGCTTTCTCAAGTCTTCGAAAAGAATGAATTAGAAAAATTTGTTAAAGAGTTGCAACATAATACTAATTAA G . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 705322 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 705323 . T TAATAATTGCTAGCATCTTCTTTTTTAGATGG . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 705326 . GC AA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Substitution DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 705332 . C AATTAGTATAGAAAATAAGTCTAAACATATTATTTT . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 705336 . ATTGTTATGTCTAGTCATTCTAGTAACATTGATATGCCTATTGTATTGGTTTATTTTT A . . NS=1;VF=0.967;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=3.5E-18;SB65=1.8E-11;TYPE=Deletion DP:AO 61:59 NC_009749_FT__subsp_holarctica_FTNF00200 705639 . A AATGAATAAGAAAGATGAATACATAGAGATAAATCTTATGAGTTTTTTCATTTTTTTATATAAAAACTTGAAAATACTAATTTTATCTCTTATCTTGCTAACAATTTTAGCTACTGCTTTTTTGTATTATAAAAATTATAATAGTAGATCAGGAGTCGTATTAAAGCAGATGATACAGGCTCCTTCATATTTTGATGGTAGTCAAAATCTCCACGCAATAATAGACTATAATAAATTAAATCTGATT . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 705960 . A AATGGAGAATCAC . . NS=1;VF=0.311;SB=1.000;VARSEQ=FT14_A_BS,FT33_H_BL,FT49_H_FR,FT51_H_ZH,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT75_H_ZH;SB50=0.0000038;SB65=0.00056;TYPE=Insertion DP:AO 61:19 NC_009749_FT__subsp_holarctica_FTNF00200 706155 . ATTGACAGCTGGATACCATCGTTACTTTGCACACAAAGCTTTTCAAACCTCTAGA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT36_H_LU;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 706848 . GATGGTG G . . NS=1;VF=0.033;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.50;SB65=0.85;TYPE=Deletion DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 707326 . GATAATAGATGTGTTGCTAAAATGAATGCTTATCAGGGACTTTATAATACTAATAATGCTTTGGCTACTATGCATGTATTATATAATGATGATTTTGACAGACTGAACAAT AGA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 707439 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 707439 . GTTGTCTTTAATTCGTAAAATAAAATTATCTCTTCGTAATATTATTCATACAATATTAGAAAATAAAAGAAATAAGTTTTTGAAACGTAACGGCTTAGAAGTTTTAAAGTACACCACCAATCTT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 707871 . TA T . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion(tandemrepeat) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 707899 . AGGTTTAAGTTTGATAAAAGTTGTATAAATAATCTATCGTATTATCAGTTTAATGATATTAACCTACCTATACCATCTGATTTAGAGAAATATTTTAGTGTTTATTATAAATCATGGAATATACCAGTAAATAAGAAGAAGTATTTAAAAGGATATTTTCACGTAGATATTAGTAATTATAAACATCATAATAATACTGTTATATATATCAAAGATGATTTTTGTTATTTTATCAAAGTTGCACCTAGTTTAATTAATTTGAAAATTTTAGAATTGCTTAGGTATTTTATAAATAGGAAATAAATGAAAAAAATACCTTTAATAATTTCTTTAACAGCTTCT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 708531 . A AATGGATTTTCTTCAAAGAGTATTTGGAAAAGATCATGGTGCTTTTGCATAT . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT67_A_GE;SB50=1.0;SB65=1.0;TYPE=Insertion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 708771 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 709044 . GATGTGTTTAACAAAATACTCTCGGATTAACTATAGTCCAAATGTCGCTAAT G . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT10_A_JU,FT17_H_LU,FT8_H_AG;SB50=0.25;SB65=0.55;TYPE=Deletion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 710015 . AT A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 710041 . AGTATATTATCGCTTCTTTTTTTGGTTGAATATATCTTAAATAGTATTATTAATCCACTAGCTGCCTATATTCAAGAAACTTTGGTAAATTATGCTTTTACTACTTTTTTGAGTTATAAAATAGCTTATGGTTTATTCTTGGGTTTGCTAATCATTGCTAATATTTTAAGCTTTTATATAAAACCACAAAAAGTTTAG A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 710321 . C CA . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT16_A_BE;SB50=1.0;SB65=1.0;TYPE=Insertion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 710336 . AATAA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT16_A_BE;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 710340 . AGTGGAGTTT A . . NS=1;VF=0.311;SB=1.000;VARSEQ=FT13_A_BS,FT14_A_BS,FT16_A_BE,FT20_H_JU,FT22_H_LU,FT25_H_BE,FT28_H_SG,FT29_H_LU,FT31_H_BE,FT33_H_BL,FT43_T_ZH,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT54_T_LU,FT5_H_AG,FT75_H_ZH,FT7_H_AG;SB50=0.0000038;SB65=0.00056;TYPE=Deletion DP:AO 61:19 NC_009749_FT__subsp_holarctica_FTNF00200 710616 . ATTGATAAGCCTTGAAGATACTAATATAGCAGCAATA A . . NS=1;VF=0.967;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=3.5E-18;SB65=1.8E-11;TYPE=Deletion DP:AO 61:59 NC_009749_FT__subsp_holarctica_FTNF00200 711408 . AATGGAGGTATTGATCATTGTTATAGTGCTTGAAGATAGTCATAGTAGCAGGAAGTTAAAGCTTTCAAGTTCATATCCAGCA A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 711675 . AATGTATGGTATCCACAACCCGCTCCAAAAGATCATATTTGGAGAACTATGCCTTTATAATGGT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT50_H_SG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 711903 . AATGCTAAAAAAAATTAACTACTTAGTTTATTTCATAGTTTTAGTT A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 712404 . AATGAATAGAGATTTTTTTATAATACTATTTGCACTTTCAAACCTTATTGTTGCATCAGTATTAATTAGATATTCAGAAGTAGGTCCAATTACAAGTTTTGGCTATAGATTATTATTACCTTGTATATTTTTATATTCATTTTTAGCAATTACTAAAGATGAAGAAAAACTATCAAAAAAATCACTTTATATCGCAGCATTAACAGGATTTTTCTTAGCTTTAGATTTAGCTTTTTATAGTATCTCT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 712794 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 713277 . AGTGTTACTAGGCTTACTAAAATTTAGTCAATATCTTTATGATTGTTATGGTTTT A . . NS=1;VF=0.279;SB=1.000;VARSEQ=FT14_A_BS,FT45_T_ZH,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT75_H_ZH,FT7_H_AG;SB50=0.000015;SB65=0.0013;TYPE=Deletion DP:AO 61:17 NC_009749_FT__subsp_holarctica_FTNF00200 713862 . GATGATCAATTTACTATTCATATACTTAGCGTATATCTTAGCTATTGTTTCGCTTTTATCTTTATGGATGATAAAGTTTAGAATATTTGGATATATTACAATTACAACATCTCTAGTAT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT49_H_FR;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 713989 . CTA C . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT49_H_FR;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 714535 . TCATTTGCATTTG T . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion(tandemrepeat) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 714660 . G GGTGATAAATTCT . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT66_A_SG,FT70_A_SO;SB50=0.25;SB65=0.55;TYPE=Insertion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 715740 . GA G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion(tandemrepeat) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 715768 . GAACATGGAGCACATTATGCAATTGGCTTCCTTGCAGCAGTATTACTACTAAAAATATTTATGCATATCCCAGAGTGGTTTAGTGGTTCAATTGGTATACTAGTACTTACGCTAGCATTTATTCATTCTGTTATATCTCATAAAAAATTACATAATTAG G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 715926 . GATGAAACCAACAGATGTAACAATAATAAGAAGACAGGTAAAAGCAATTGCTGTACCATTTGGTAATGAGATTGAGTTAATGCCTGGTCAAGAAGTTTTAGTAACGCAAGATAAGGGTGGAAGCTTTACTTTAAATGTAAACGGTAATTTACTTCATCTAGATGGTAAAGATGCTGATGCGATAGGTAAGCAAATCATCAGATATCCTGTAGAGGGGTATGATATTAAGCCAGGTGATCCAATTAATATGGATGCTATTTGGGATCAAATGAGAACAGTTTATGATCCTGAAATTCCTGTCAATATTGTTGATCTTGGTTTGATTTATAATATTATTACTAGAAAGTTAGAGAATGGTAATTTTCATGTAATAATTGAT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 716518 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 716778 . GT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 716817 . A AAAATAAGAAAGTTGAACAAATTAAAAAGGGTTATTCACAAGAGTAA . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Insertion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 716817 . AGTGGTG A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 716824 . A C . . NS=1;RF=0.885;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 716823 . GA G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 716824 . AGTAAATTTAAAAAAACCTGTTTGATAGTTAGTAGTTTATTGGCTTGTAGTGGTTTAGCTTATTCTGAAGATTCTCCTCAAGTTGTTTCACAAGGGGGGCCTCTTGGAGCTACTAGTATTGGTGATCAAAACCTTGGACAGCCAGATCCAAATGCTAGTGGAGCCTCTTCAACAACACAGACTACCGGTTCAAATCTAAATGATAGGGAACTTTTGCTAAAATTACAGCAGCAGGTACAGCAACTTCAGGGACAATTACAACAGCTAAAAGCACAGGGTAATGGTGGTGGATTACAGAATACCTCTAATGGTAGTTCGCAGTTTACTACTTACAGCTCAAAAGTTGATGGTAATAAAAATCCTCGTACGCTTGGAGGCAATGGTGAGAGTAAAGATCTGAGTCAGGCTTTGATTGGTGGTCAAACGTCGTCAGATATTATGGGGAATGTTAATGCTAGTAACTCTATCATTAATTTAGCTTCTGAGCCATTAGGAGGCGTCTTTAACCAAAAAGGCGGTATCGACGTTGGTGGAGCTCCGGCGATTACAACACAAGGTCAAGTTACCTACTTAGGTTCGTACTCTGGTAACAACAGTATTCCAATTGGTCAGATTTCTTCTAACCTTTTTGCTTCTACATTGTTGGGTCAAAGAGAGAAGTTTGATGACTACTCTGTATTCTTTGGTGGCTTTATAGAAGCAGATGCCCAAGCTTGGTTTGGTAGTGCTGTTACTAAGGCGCAAAGTGCTGGCCAGTTATATAGCAATGGCCAAAATATATATTTAACATCAGCTAATTTATATTTCTTATCAAATCTTGGTCATTATGTAACAGCTCAGTTTGATTTTGATACTAATGAGTCAGGAAGTTTTAGTTTAGGTAATGCTTTTGTAATTTTTGGTAACTTAGATATATCACCATTCTTCGTAACAGCAGGTAGAAACAAGCTATCTGTTGGCTCATATGGTGGTGGTGGTACTTGGACTAGCGGTATCACCAAATTTCTATCACCAAATCAGGTTACTAACGTATCTATTGACTATAAAGATCAAGTCTGGAACGCCAACATTGCAGTATTTGGCTCTGATGATAAACGTGCAAACTTCTCAACAGGTTTATTCTATGCTGATAGCTGGACACCAAACTTAGCGGCTGGTTTTAACGTAGGTTATGTCTTTAATATTGCTGGTGCTGGTAACTCTTCGATTGCTAACTCATTAGCTAACTTAAATCGTAGTAGTGATAAT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 718974 . TCT GTC . . NS=1;VF=0.066;SB=1.000;VARSEQ=FT24_H_ZH,FT51_H_ZH,FT55_A_ZH,FT64_A_ZH;SB50=0.13;SB65=0.36;TYPE=Substitution DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 718979 . A T . . NS=1;RF=0.934;VF=0.066;SB=1.000;VARSEQ=FT24_H_ZH,FT51_H_ZH,FT55_A_ZH,FT64_A_ZH;SB50=0.13;SB65=0.36;TYPE=SNP(transversion) DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 718980 . A AATATATTTAAAGTGTTTATTTTCTCCAAAAATCTGGCATAAATAA . . NS=1;VF=0.066;SB=1.000;VARSEQ=FT24_H_ZH,FT51_H_ZH,FT55_A_ZH,FT64_A_ZH;SB50=0.13;SB65=0.36;TYPE=Insertion DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 718980 . AATGAAAAAATGCTGTAAATTATTAGTGATTGCTGGATTACTT A . . NS=1;VF=0.525;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT18_H_NW,FT19_H_BE,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT28_H_SG,FT29_H_LU,FT31_H_BE,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT57_A_BE,FT5_H_AG,FT60_A_JU,FT73_H_LU,FT75_H_ZH,FT7_H_AG;SB50=4.7E-10;SB65=0.0000021;TYPE=Deletion DP:AO 61:32 NC_009749_FT__subsp_holarctica_FTNF00200 719863 . ACAATTAATATTTATGGGAATATATTAAGTATTAGTTATCCGGAGGCGTTAGCTTTAAGCTACTATGATTTTAGTGTGGGTTGGGAGTTGAGAAACA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT17_H_LU;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 719961 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT17_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 719964 . AATGATAGCAGTAAAAGATATAACTGATTTAAATATACAAGACATAATTAGTCAGTTAACTTCTGAAGTTATAAATGGCGACACAACCTCTTCTTCTGCCAAGTTTGCTTGTGAAATTAATAGCTATATTATTAATTACAAACTATTAAACATTAATCTTATTAATACTCAACTAAAAAATACAAAGATACTTTATAGAAAAGGC A . . NS=1;VF=0.066;SB=1.000;VARSEQ=FT10_A_JU,FT17_H_LU,FT7_H_AG,FT8_H_AG;SB50=0.13;SB65=0.36;TYPE=Deletion DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 722427 . AATGTACCAA A . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT49_H_FR,FT50_H_SG,FT51_H_ZH;SB50=0.25;SB65=0.55;TYPE=Deletion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 722637 . G GATGAGAAATACTATCAAGATAGTCATTTTATTGAGTCTTGGA . . NS=1;VF=0.967;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=3.5E-18;SB65=1.8E-11;TYPE=Insertion DP:AO 61:59 NC_009749_FT__subsp_holarctica_FTNF00200 723189 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 723915 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 723916 . TTAGCTTTTTATACATCAATTGGATTTATTATTGAAGATAAAATAGATGATATTATTTTCTCCTCGCAGTACCATATAAATAAGTTAAAACTTTCTGCAACACCTCAAGAAATTATAGAAAAAATTGCTGCTAAAAATAAGGATTTTTTTT T . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 724068 . AATGACTAAGAAAAAACTTTTAAAAGCATTAGCTGTTGCTGCTATTGCAACAAGTTTAGTAGCTTGCTCAGATAGTTCTAGCAATGATAAAACTTCAACTACTGCTGTTAGCTCCGGTTCTAGTGTAGCTACAACTACAGTAGCAGCTCCTGCAGATAACACTAACGTTACAGCTAACGCAAGCTATACTATTGGTTATGGT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 724425 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 725190 . ATTGGTTGGAATTGCAGCATTTTGTGCTGCCCCAATTCATGGAGTATATAGAAAAAGCTACACATATATTATAGTCACTGTTATCTCTATAAATATATCTATAATTATCGGAACAACTATATCCCAGCTACCGCTGCTAGTACCATATGTTACATTTATCATCGGTGCTTTAACTTTTTATCTACCAACAAAGTTTAAACTAATGCCTGAGATACTCACAAAATTCTGTTTTATCGGATATATCTCAAGTACTTTTGGACACAGTCGTTTAAACCTAAGCGTCATTATAACTTCAGCCACTATAATAACTATTATACTCATATTTTATTATGCCTTAATAAATATTCTACTATATAGAGATCAGC A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT51_H_ZH;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 725555 . T C . . NS=1;RF=0.885;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 725554 . CT C . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT51_H_ZH;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 725555 . TACATTCTAAGCGTGAGAAAGTCCAAGACATATACCACCATGTGATGATCGTTGCTCTGGTTTCTCTTGTCGCTGGATACTTCGTAACTAAAATTATGACTCTATATATACCTAACACCAATCCTTGGTGGATTATGATGACTATAGTTTTAGTTCTAGGTTACACTTATCAAAGAGTAAAGGTTTATGCATTTAAAAGAGGTATAGCTAATATTCTAGGTCCGATCATA T . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT51_H_ZH;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 726461 . T TA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion(tandemrepeat) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 726510 . G GTTGAATATGCTATTAAACATGATTTTACAAATCAAGATTTTTATGGGTTATATAGAGCTTATAAAGAAATTTATAAAAAATAA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 726510 . GATGTTTACAAAGAGATATGCAAATGAGAAAAAAACTGAACAAATAAGAATACAAATCTTAAAAGAGGTTAATTATCATTCCTTAGATTTAGTAAACCATATATCTTCAATGTTTAATATTAGTCGACAATCTGTATATCGACATATAAATAATTTAATAAAAGAACAAAAATTAAGTTTTGATATTATAGATGGCAAGAGAGTTTATAAATATGGAAAAGTAAGAGAGCTAAGTAAGCTTATAACAATCAATAAAGATGTTAGTGAAAGTGATATTTATGCTAATTATTTTATTTGGGTTGAGCAAGATTTAAAAGAAAATGTCAAAGCAATAGTTGAATATGGATTCACAAAGATTTTAAATAACGTAATAGATCACTCAGAATCTAAAACTTGTTTTGTTTATGTTAAAAGAGATTTAAGTAATATTACAATTATTATTAATGATGAAGGAGAGGGGATATTTAATAGAATAACTAGATTAAAAAAATTATCAGATACAAGACAAGCCTTATTAGAACTTAAAAAAGGTAAATTAACTACTGATGCAGAACACCATTCTGGCGAAGGAATTTTCTTTTCATCTAAAGCTTTCGATGAGTTTGTAATAATATCTGGAGACCTTACTTTTATACATGAAAATAAACTTAAGAATGACTACTTACTAGATCAAAAGCCAGGTAGAGGAACTTATGTAAAAATGAAAATTGATATTAACTCAGAAAAAAAACTTATAGATATTTTCGATGAGTTCGCTGAAGCAGATGAATATGCTTTTAATAAAACTATT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 727551 . AATGTGTGAAATAACTTTTATACCACTTTTAGCAGATGATGTTTTAAGATTGTTTATTTCTTTTATATTATTTTTAAGTTGCGTGATTTTAAGTTATATTTTTGCTAAGCAGAAACCTTGGGATATTGCTTTTTGGATTTGCTTTTCGATATTTTTATTTAGTATGGGTGGCT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT7_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 727737 . TCATCATATTTATTTAGAAAATACTTTTTCATATGATGG C . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT7_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 727778 . TTA CAT . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT7_H_AG;SB50=1.0;SB65=1.0;TYPE=Substitution DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 727782 . TT AC . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT7_H_AG;SB50=1.0;SB65=1.0;TYPE=Substitution DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 727786 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT7_H_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 728265 . GTTGGAAATTATCGATCCTTTCTTTTATGATCTTGATTTAACATTTTGTCCATTAGGCGATAGGGCAGTG G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT75_H_ZH;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 728595 . AATGAAAGAAGTTTTG A . . NS=1;VF=0.967;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=3.5E-18;SB65=1.8E-11;TYPE=Deletion DP:AO 61:59 NC_009749_FT__subsp_holarctica_FTNF00200 728883 . A ATTGAATAAAATAGTTGCTAAAAAGGTTATAATCTCGATATTAGAACTCTGTATTCAAAAATTTAGC . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT55_A_ZH;SB50=1.0;SB65=1.0;TYPE=Insertion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 730460 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 730461 . AATTTTATTTGAGCTAGAGCTTAAATCATTGATTGAGTCTATTCCTGGTGGATATATAAATATTCAATAA A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 730530 . AATGTCTAGTTTATTTCTTCTTTTAGAATCA A . . NS=1;VF=0.066;SB=1.000;VARSEQ=FT55_A_ZH,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.13;SB65=0.36;TYPE=Deletion DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 730788 . AATGGCTGGAGCT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT10_A_JU;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 731166 . G GATGATAAATACAGCTATCAAAAAAGATCTAGAAAACATAGTAACTAATCTAGACAAAATTGACTTAACTCAACACGCTTTAGTCAATGATTCAAATAACCAT . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 731627 . GTATAGGCTTTATCTCAATAGTACAAGCC TA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 731658 . G GATGAAAAAACTCATAATT . . NS=1;VF=0.721;SB=1.000;VARSEQ=FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT32_H_LU,FT33_H_BL,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT45_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT59_A_FR,FT5_H_AG,FT63_A_BL,FT64_A_ZH,FT66_A_SG,FT67_A_GE,FT69_A_SO,FT70_A_SO,FT73_H_LU,FT7_H_AG,FT8_H_AG;SB50=1.1E-13;SB65=1.2E-8;TYPE=Insertion DP:AO 61:44 NC_009749_FT__subsp_holarctica_FTNF00200 731934 . ATTGTTAGATTTTTTTAAAGAAGTATTATTAATT A . . NS=1;VF=0.967;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=3.5E-18;SB65=1.8E-11;TYPE=Deletion DP:AO 61:59 NC_009749_FT__subsp_holarctica_FTNF00200 732765 . A AATGTTTAGAAAATTAGTTGCTCTAGCAAGTATTTTTACAATATCTACATTTTGTCTAGCTAGTGCTGATCAGACAACTGAGCAGTCAGAGTCTTCTAGTTCTTTAAACAATAATTATTCCCCAGAGAGTATTCGGAAGCTTGAATCTAATGCTTTTAGAAGAGTTTTCCCTAACGAAGCTTATATACAAGATAATGTTCCTTTAAGCTCAGAACAGCTTGAAAAAGCAGCAATACAGGCTATTCAGGATTTATCAGTTAAAGAGGGTGAAGCATTAACTGATAGTGAAAAACGTGCACTTGCTAAGAGAACATTTGATAATAAGATTAATAATGCTCTTAACATTAATGCTATCAAAACTTCTTTTTTTAATGGTTTTCGTGTTAGTGAAACTTTCACTCATGCA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 733649 . ACATAGCTACTAAGCATAGAGTTGTTAAACCTCAAGATGAAAAGGAAAATCTTGATAGGATTTCAACACCATGTTTCATACATCCTAAATCCGATGTTTATCTATCTGATAAATATCCAAGAGCTGAGATATTTCTTAACGAGAGACTAAAGGAATTAGGTCTAAAATA A . . NS=1;VF=0.033;SB=1.000;VARSEQ=FT49_H_FR,FT69_A_SO;SB50=0.50;SB65=0.85;TYPE=Deletion DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 733818 . A AGTGTTGCAGGGGGGTATATTACGCAAGACTTCTACAGCTACAAATACAGATGGAACTACTACTACAGTAGGAGCT . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 734219 . G A . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT40_T_ZH,FT47_T_ZH,FT75_H_ZH;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 735103 . GATAAAGACCAAGATGGTGTTACAGATGATGGCGAGCTAACTTCTCTTGCCGATGCTGGTATAGATAGTATTGATCTGAATGCGAAGACTGTAAACAAGAGTGTTGCAGGGGGGTATATTACGCAAGACTTCTACAGCTACAAATACAGATGGAACTACTACTACAGTAGGAGCTATGGATTTTGCGGAGA AT . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 735297 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 735297 . AATGTTTGATTATATATTTAATAAAATTAAGGCGACGGTTTTCTCCAAAATTACCCCGGCTCAATTGCTTCTTACAGCTATTTTAGCTTTTGTATTTGGGTTTGTTCCAGGTATTGCTTATTCACCATTACTTTTTATAGGAGTACTATTTCTAGTTATAATCCTAAGGATAAATATCGGTGTATTTGTTTTTATTGCAATTATTGCTAAAGCGCTCTCTTATATTTTACAAGGAATTAGCTTTGCA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT10_A_JU;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 737211 . AATGTGTTTAACAAAATACTCTCGGATTAACTATAACCTATCAGTAGCTTTTGGAGCTTATGCTGAGCATGGTCTGAAATCACAAATCTCAGCCGAGCATTTTAATTTTATC A . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT10_A_JU,FT17_H_LU,FT8_H_AG;SB50=0.25;SB65=0.55;TYPE=Deletion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 737637 . G GATGGCAAATGGTGGTTGGCGGATACTTTTGGAT . . NS=1;VF=0.246;SB=1.000;VARSEQ=FT14_A_BS,FT22_H_LU,FT28_H_SG,FT30_H_SG,FT31_H_BE,FT52_T_LU,FT55_A_ZH,FT59_A_FR,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT71_A_BS,FT75_H_ZH;SB50=0.000061;SB65=0.0031;TYPE=Insertion DP:AO 61:15 NC_009749_FT__subsp_holarctica_FTNF00200 738303 . AATGTGTTTAACAAAATACTCTCGGATTAACTATAATGAAATACAAAAGGCCAATCTGCTTAAAAGTGAAAACACTATCGGCTTT A . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT10_A_JU,FT17_H_LU,FT8_H_AG;SB50=0.25;SB65=0.55;TYPE=Deletion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 738573 . AATGCAAATTAGTTTAAAAAAAGTTATAAGTGTTGCGTTGTTATCGGCTGTCTTATCATCATGT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 739107 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 739171 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT17_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 739479 . GATGAACTTAAATGAATTAAAGTATAAATCTGTTAATGAGCTAATGGATATAGCTCAAAGTCTAGATCTTGAGTCACTTCGTGCCAGAAAACAAGAGCTAATCTTCTCAATTCTAAAGTACCACGCTGATAAAGGTGAAGACATTTATGGTGAAGGTATTTTAGAAGTCCTACAAGATGGCTATGGCTTTCTAAGATCTTCTGATAGCTCGTACTTCGCCTCTCCAGATGATATCTATGTTTCACCTGCTTTTATTAGAAAACTAAATCTGCGTACTGGTGATAGTATTGTCGGTAAGATTCGTCCGCCTCGTGAAAATGAGAAATACTTTGCTGTCAAACACATCGATAGTGTTAACTTTGATTCTCCAGAATTAGCTAGAAAGAAAATTTTATTTGAGAACCTAACTCCTGAGTATGCTAAAGAAAGGCTAACT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 740742 . GATGAAGAGGGTTATAGCGACAATCTTGGGATTAACTGTAGTTTCTGGAGTATATGCTGATAGCTATACAATGTATGCAAAACCAGATACTAAGTCACCAAAGCTTGCAACTATAGATGATCAAGATCCAAATTATAAAGCGATTTTCTCAAAAGGTGAATGGATCGAGGTAGTTGATAATAAAGATGGTAGTGTTGGTTGGGTCAAGCAAAAACCTCAAGATAAAACTTCACAGGCTATTAGCAAAGATCCAATCGAGCAAATGATGGCAAATTTTCAAAAGCAACAACAGTTATTAGATCAACATTTCAACAAA G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 741279 . GATGTACTATATTTATGTATTCTCAGGTTTGCCAGGAATAGGCAAAACAACTTTAGCTAAACAATTAGCTCAAGTTATACCTAATACGGCATACTTTAGAATTGATACTGTTGAGTATTATCTCAAAAAAGCATATCCTCAAGAGCCAACTAAACAAGGTTATGAGCTAGTATATTATCAAGCAAAACAAAACCTTGAACTTGGTAAAAATGTAATTATAGATTGTTGCAACCCTATCTCAGAATCTCGTGATTTGTGGAACTCGTTATTACAGATAAAAAACACAAAAATTATAAATATAGAA G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 741879 . A T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT32_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 741880 . TTAGGACATCAAATTTTATTAATAGCTCCTAAAGGAAGTTATCATCAAAATACTAATGTTAAAATTATTGAGTGTGAAGATTTTAGTAATCTAGCCAAGGTAATACCAAAAAATGTAGATATAGTTCATATTCATGATATAAATTATATAAACCAAGTAAAATCATTTAGGTGGTTATTGACAATACATGTAATGATAT T . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT32_H_LU;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 742080 . GATGAAGAAAATAATTATAGTAATAGCCTCT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT68_A_SO;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 742530 . G GGTGTTG . . NS=1;VF=0.443;SB=1.000;VARSEQ=FT13_A_BS,FT16_A_BE,FT18_H_NW,FT19_H_BE,FT22_H_LU,FT27_H_SG,FT28_H_SG,FT30_H_SG,FT37_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT44_T_ZH,FT45_T_ZH,FT47_T_ZH,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT58_A_SO,FT5_H_AG,FT68_A_SO,FT71_A_BS,FT73_H_LU;SB50=1.5E-8;SB65=0.000018;TYPE=Insertion DP:AO 61:27 NC_009749_FT__subsp_holarctica_FTNF00200 742530 . GTTGGAGTTATCTCGGCTTTTAACAAATGAATTCTCAGAGGAATTACAGCAGACACTAAAAAGATGTGTTGATCTA G . . NS=1;VF=0.377;SB=1.000;VARSEQ=FT11_A_JU,FT17_H_LU,FT20_H_JU,FT24_H_ZH,FT25_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT38_T_ZH,FT43_T_ZH,FT46_T_ZH,FT48_H_LU,FT55_A_ZH,FT56_A_AG,FT59_A_FR,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT66_A_SG,FT67_A_GE,FT69_A_SO,FT70_A_SO,FT8_H_AG;SB50=2.4E-7;SB65=0.00010;TYPE=Deletion DP:AO 61:23 NC_009749_FT__subsp_holarctica_FTNF00200 742890 . GTTGGAGTATATAGAAAAACTAAAAGAAATAGCTCAAAAC G . . NS=1;VF=0.459;SB=1.000;VARSEQ=FT10_A_JU,FT17_H_LU,FT20_H_JU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT56_A_AG,FT71_A_BS,FT8_H_AG;SB50=7.5E-9;SB65=0.000012;TYPE=Deletion DP:AO 61:28 NC_009749_FT__subsp_holarctica_FTNF00200 742929 . CTTGTTATTTTATATAGATGA C . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 742950 . G T . . NS=1;RF=0.967;VF=0.016;SB=1.000;VARSEQ=FT17_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 742949 . AG A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 742950 . GA G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion(tandemrepeat) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 742952 . A T . . NS=1;RF=0.967;VF=0.016;SB=1.000;VARSEQ=FT18_H_NW;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 742951 . AA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion(tandemrepeat) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 742952 . AAAAAGAAGCTTACAAATTTTGCCAAGATAATGGTTTTGAGCCT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 743029 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 747603 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 752907 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 757566 . GGTGAACTTATATCATCTATACATCGCACAGATATCAAAGCAAACTATACTTTCGATAATATGGGCAGCTGGACCAGTTACAATAATCGCTATAACTTTAGGCTATTATCTTAGTCATGGTACTAGTGTACCTTTGGTTACAGTGGCTTATTTTTCATTTTATGTTTTTTTTGTTGGCTTAGTTGGTTTTATCAGTAAGATTATTTTTGACTCAATTAGGCACTGTAATCAAGAGCAG G . . NS=1;VF=0.115;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019537_FT__subsp_holarctica_F92,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.016;SB65=0.098;TYPE=Deletion DP:AO 61:7 NC_009749_FT__subsp_holarctica_FTNF00200 757803 . GATGCAAGAGAGGTTTTTAGCGGTTATTGAAGAGTCATATCAAAACTTATATTTATCGAAGAAGTTAAACCTTATTAGACTTACAGATCGAGTTAGGAATAAAAAAATCGCTGCTGAGATTTTATCAAAATCGCATCCTACAGATAAAGAAATTTATTATGTTTTTAATTTGCATTTCGGTGAGGAAATGGCTCAATTTGCAGAATTAATTCATATTCACAAAGAGAATGGTTTTCCTATTTATACAGATAATAACAAACGTAAACTTAGAAAATTTTATAAACAAATTTATAATACAGACTTACCGATAGATCTAAAAAAGAAGTTTTTGAGAGCTTTAGTAGGTGAGTAC G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 758155 . G A . . NS=1;RF=0.885;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 758154 . CG C . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 758155 . GCTACTCTTAAAAGAGGGATTGAAAGAAAAGTAGGTTTT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 761982 . AATGTCGCATAATAGTGTTTTTAATGGCTATGCTCCTTATGTAAATGTTTATGATGAAATCTTCACAGCTGATGGCAAAGTACGAGACAATGTCCGCCAAACTATCAGAGCTATAGATGAATTAAATTTAGAAACATTACATGAGAAACAGAAATTTGTAGATGCCTCATTTCTAAAAAGTGGTATTACATTTACAGTTTATAGTGATAGCCAAGGTACGGAGAAAATATTTCCTTTTGATCTGATTCCAAGGATTATCTCAGAAGATGAGTGGCGTGAATTAGAAAGAGGT A . . NS=1;VF=0.148;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT58_A_SO,FT5_H_AG,FT63_A_BL,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.0039;SB65=0.041;TYPE=Deletion DP:AO 61:9 NC_009749_FT__subsp_holarctica_FTNF00200 762273 . TTTGAAACAGCGTTTAAAAGCCTTAAATGCATTCTTAAATGATATTTATACTGAGCAAAAAATACTAGAAGATGGCATAATTCCTAGAGAGCTTGTAGAATCATCAGAAGAGTACTTACCACAA T . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Deletion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 763017 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 766764 . G A . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT27_H_SG,FT28_H_SG;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 770631 . AGTGTTTACGAAAAAAACGGCTTTTACTTATTTTATTACGGTTATATTAATTTTTAACTCGGGTTGGATCGATAGTGTAGTTTTATATAACTCTTTTGGTGCCAGTGTTGCGGTTATGTCTGGGAACTTAAGAATTCTAGGTCATAGTATAGCCGGCTCAGATTGGATCTTTATGTATAAAGTCGCGATACTTATTGCTGGGTTTGTTGTTGGTGCTGCGATAAATGGTGTTATTATGAAAACGGATGCGTATGTGATATCAGAAGATCATACTAAAACATTAGTTTTACAAAGCGCGGTAATGCTAACAGGTACTTTACTTATAGATATTTTTGATAACCACCGTGTTATTG A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 770991 . ATT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 771182 . GT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 771235 . ATGTTGTTTCCTTCGGTGATATTACCTATTTTTGTTGGTATTGTAATTTTATTGACTTACAATATGAAAGTTAAAAATCATAGCCTTTAA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 775122 . T C . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 777240 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 780429 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 781876 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 788878 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT49_H_FR;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 789561 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 791589 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 793217 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 793550 . T G . . NS=1;RF=0.738;VF=0.262;SB=1.000;VARSEQ=FT10_A_JU,FT13_A_BS,FT14_A_BS,FT17_H_LU,FT20_H_JU,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT31_H_BE,FT60_A_JU,FT65_A_SO,FT66_A_SG,FT68_A_SO,FT70_A_SO,FT8_H_AG,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.000031;SB65=0.0020;TYPE=SNP(transversion) DP:AO 61:16 NC_009749_FT__subsp_holarctica_FTNF00200 794848 . T G . . NS=1;VF=1.000;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG,NC_019537_FT__subsp_holarctica_F92,NC_019551_FT__subsp_holarctica_FSC200;SB50=8.7E-19;SB65=7.7E-12;TYPE=SNP(transversion) DP:AO 61:61 NC_009749_FT__subsp_holarctica_FTNF00200 795461 . G C . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 797762 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 798109 . G T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 798321 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 798389 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 798865 . G GCTA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion(tandemrepeat) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 800435 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 801483 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 804055 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 807922 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 808270 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 809337 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 810633 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT10_A_JU;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 813484 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 814310 . ATGA TG . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 814349 . AGCAAAATGGTATCGTATTCTTAGATGAGATTGATAAAGTATGTAGAAAATCAAGCAACTCAGGGGCTGATGTGTCACGCGAAGGTGTACAGCGTGATTTATTACCATTAGTTGAAGGTTCTACAGTATCCACAAAATATGGCGTGATCAAAACTGATCATATACTATTTATTGCATCTGGTGCATTTCATGTTGCTAAACCTTCTGACCTTATACCAGAGCTACAAGGTAGATTACCAATTAGGGTTGAGCTGAAATCTCTAGAAATAGAAGATTTTGTAAGAATTTTAAGAGAACCTGACTGCTCTATTCTTAAGCAGTACATTGCTTTGATGAAAACTGAAGGTATTGATTTAAGCTTTGAAGAAGATGCAATTAGAAAAATTGCTGAAATTGCCTATAAAGTCAATGAAGAAGTTGAAAATATCGGTGCTAGAAGACTTCATACTGTTATGGAAAGACTTCTTGAGAAAATCTCTTTCGATGCTCCAGAACTAGTAGAGAAAAATATCAACATAACTACAGACTATGTCAATGAAAAACTAGGAAACCTAGTTAAGAATAAAGATCTAAGTCAATATATTCTATAA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 814938 . AATGCCTAATAAAGGAATAATT A . . NS=1;VF=0.967;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=3.5E-18;SB65=1.8E-11;TYPE=Deletion DP:AO 61:59 NC_009749_FT__subsp_holarctica_FTNF00200 816868 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 826954 . TTAGCTGAGAAGGCAAATATACCAGTAGTAAGTACATTATTAGGGTTATCAGCATTTCCATACAATCATGAGTTATACAAAGGTATGTTAAGTATGCATGGTAATTATGCAGCTAATATACTTTGTAATGAGGCTGATGTTGTAATTGCTGTGGGTATGAGATTTGACGATAGAGTAACAGGTGATCTTAATCATTATTTACCAAATGCTAAAATCATTCACATCGAGATAGATCCTTCTGAGATTAATAAAAATGTTAAGGTTGATATTGGTATTAATGCCGATGCAAAAGAAGCATTAAACGCATTATTACCATATATAGCTAGCAATTCACACCCAGAGTGGCATCAAGAATTTGCATCTGAGCACGAGAAAGAGGTTAGAGCTATTATAAAATATGAAACTATGCCTACAGATGGTGAAATCAAAATGGCAGAAGTAATAAATCTTTTATCTAAAGCTACGAATGGTCGTGCGATAATAGTGTCTGATGTTGGACAACATCAAATGATCGCAGCAAGGTATTATCAGTTTTTGGAAACTAATTCTCATATTAGTTCAGGTGGTTTAGGCACTATGGATTCGCTCTTCCAGCCGCAATTGGTGCAAAGATGGGCATCAAAGATAATAGAACTGT T . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 828511 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 828513 . A AATAGCCCAAAGAAAATCCAAATGGAGAGCATCTAAGCAAAAAGCAAGTAGAGGAACTCTAAAGAAATACATAAAAACAGTATCATCAGCATCAACAGGATGTGTTACAGACTTAGATTAA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 829975 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 830004 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 830872 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 831079 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 835232 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 835499 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 836670 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 837270 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 838548 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT13_A_BS;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 839740 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 844946 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 850447 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 852352 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 852393 . AATGATTTCTAATTTTATTTTATTTGCATTATTTATAGTGACAATTGCTTTAATAACTAAACCTTTAGGTAGCTATATATTCAGGGTTTTTAACAATGAGAGAACTTACTTGGATTGGTTGGCAAAACCTTTTCAAAGAGTTTAT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 852627 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 853298 . CTATATCTGAA C . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT71_A_BS;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 853321 . GACTTTTTACATAGTAAAGATATTCAAGATATCTATGGTCAAGTTGGTCACTTATCAAATATGGAAGGAAAAGAAAGCCGTTTTGGTGTGTTTTACTCTACTTTATATAATACTGTTTCAACATCCGCATCAGATGGTGGTGTTAATAGTGTACTTGATAGTTATTCGCCATTAGCCGGAATGATGGCAATGCTAAATATGGCAATAGGTGAAGTTATATTTGGTGGTGTTGGAGCTGGTTTTTATGGTTTCTTTATGTTCTTGATGTTGGCTGTGTTTATCGGATCATTAATGATAGGTAGAGCTCCTAGCTTTTTAGGTAAGCGTATAGAAGCTAATGATATGAAGTGGACAATGTTTGCTTTATTGATATTTCCATGCTGTGTACTAGTATTTACTGGTTTAGCTGCGGTTATCCCAAGTGTTCATCAAACATTGACCAATAGTGGTGCACATGGTTTTTCAGAAATCTTATATGCGTATATTTCAGGAGCTAATAATAATGGAAGTGCATTTGCTGGGCTATCAGCAAACACAAACTATCTCAATATAACAATTGCCTTAAGTATGCTAATAGGTAGATTTGGAGTTATATTTGCAGTGATAATGTTAGCTGGATCGCTAGTTAAGAAAAAGCGTAGCTTACAAATGAGTGAAATTAGTTCACTTGATACAACTAGTTTTATTTTTGCAATATTAGTATTTTTTACAATATTATTAATTGGTGGTTTGACAATATTCCCAGCGTTAGGTTTAGGGCCAATATTAGATCAATTAAATCTAAATTTCTTATAG G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT71_A_BS;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 854582 . G A . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT14_A_BS,FT17_H_LU;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 856620 . A AATGGATAATCAACAAAAAGTAGATGCACTGCTAAACCTAGCTAATA . . NS=1;VF=0.148;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT58_A_SO,FT5_H_AG,FT63_A_BL,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.0039;SB65=0.041;TYPE=Insertion DP:AO 61:9 NC_009749_FT__subsp_holarctica_FTNF00200 856620 . A AAAAGCCAAGAATCTAAAAAAGGTAAATTAAAAATCTTTCTTGGCTATGCTCCTGGTGTCGGTAAGAGTTATACGATGCTTAATAATGCTCGAGCTTTACAGAAAGATAACAAAGATGTTGTGGTTGGCTTACTTGTAAGTCATGGCAGAGCAGACACACAGGCATTACTAGAGGGGCTTGAGATTATGCCTCTTAAAAAGGTAAATTATCGTGGTAGAGTGTTTGAAGAGCTAGATATAGATGCAATTAAAGCTAGAAAACCTGATGTTGTGATCGTTGATGAATTACCTCATTCGAATTTACCGACATCACGAAACAAAAAAAGGTATATCGATATTGAAGAACTTCTTGATGAGGGCATTTCAGTTTATACAGCGATTAATATTCAACATATTGTTAGCTTATCTTATGAGGTTACACAACTTACTCAGGCTAATGTTAATGAAATTGTTCCAAATGATTTTATTCAATCAGCTGATGAGCTTGTTGTAGTTGATGTAAGTCCAGAGGAACTGATTAAAAGACTTAAACAAGGTAAAGTATATAAAAGTGATGCAATAGATAGAGCATTAGAAAGATATTTTCAATATACAAATCTAACCATCCTCAGAGATTATACTTTTAGG . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 856622 . TG AA . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856626 . TGCA CAAG . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856632 . C T . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856634 . A TAAAAAAGGTAAATTAAAAATCTTTCTTGGCTATGCTCCTGG . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Insertion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856640 . G GTAAGAGTTATACGATGCT . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Insertion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856642 . C A . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transversion) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856644 . AG TA . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856648 . AT GC . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856652 . AGCAG GAGCT . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856658 . ATAG TACA . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856665 . GCT AGA . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856669 . T A . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transversion) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856672 . C A . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transversion) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856675 . C G . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transversion) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856679 . G T . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transversion) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856681 . AGT GTG . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856685 . C T . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856687 . ATACC GGCTT . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856693 . AC CT . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856696 . TC GT . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856699 . CCAT AGTC . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856706 . TACT GCAG . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856712 . T C . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856714 . TG GA . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856717 . TGTG ACACA . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Insertion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856722 . CT GC . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856726 . G T . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transversion) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856728 . TG CT . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856732 . GC AG . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856735 . ACTCCA GGCTTG . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856743 . T A . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transversion) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856746 . A ATGCC . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Insertion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856748 . TACGT CTTAA . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856761 . GC AT . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856764 . C A . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transversion) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856766 . TAGC CGTGGTAG . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Insertion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856771 . AC GT . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856774 . AC TT . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856777 . TT GA . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856780 . A G . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856782 . CGC GCT . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856786 . AGAC GATA . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856792 . ATA GAT . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856798 . G A . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856801 . TTT AAA . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856805 . TACA CTAG . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856816 . A G . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856819 . AAA GTT . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856824 . CGCA GATCGTTG . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Insertion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856829 . CT TG . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856833 . ACTTAATT TTACCTCA . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856843 . G C . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transversion) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856845 . TG AA . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856849 . ATTA TACC . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856856 . G A . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856858 . T C . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856860 . TA CG . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856865 . TGCTGGC CAAAAAA . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856873 . A G . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856875 . C T . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856877 . GTCTTGGATATA TATCG . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Deletion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856896 . TC AG . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856899 . TA AC . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856902 . A T . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transversion) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856907 . G A . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856911 . TA GG . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856914 . GC CA . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856922 . A T . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transversion) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856924 . AG TA . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856928 . T C . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856930 . ATT GCG . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Substitution DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856933 . AGAGTACGCAAAA A . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Deletion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856947 . C T . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856952 . GGTGCAAC TT . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Deletion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 856961 . G A . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 857157 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 857443 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 860011 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 861583 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 867859 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 868426 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 868449 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT41_T_BL;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 868569 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT10_A_JU,FT13_A_BS,FT20_H_JU,FT60_A_JU,FT68_A_SO,FT8_H_AG;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 868658 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 869169 . CACTGAAGGAACTAAACTCGCTTCTACTAAAGAATTTACTAATGAAATTATAAAAAACCTATAG A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 869237 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 871206 . AATGAATGAATATAATTTTAGTGATATAGAAAAATCGACACAAGAGTATTGGCGTAAAAATGATACTTTTAAAACAATAGAAGATAATACTAAAGAAAAATTTTATTGTCTTTCAATGTTACCCTACCCAAGTGGTACTCTACACATGGGACATGTAAGAAATTACACGATAGGTGATGTCATAGCTAGATATCAAAAAATGCAAGGTAAAAACGTCCTTCATCCTATGGGTTGGGATGCCTTTGGTCTACCTGCAGAAAATGCAGCGATTAAGCACAAAAAATCACCATACGAATGGACAAAAAGTAATATTGCTTACATGAGATCGCAGTTTGACTCTCTAGGCTTTAGTTTTGACTGGTCAAGAGAGATTGCAACTTGTGATGAAGATTACTATAAATGGGAGCAATGGTTTTTTATTCAGCTATACAAAAAAGGTTTAGCATATCGTAAAAATTCAGTCGTTAACTGGGATCCGGTTGATCAAACAGTTTTAGCAAATGAACAAGTTGTTGATGGTAGAGGTTGGAGATCTGGTGCATTAGTTGAGAAAAAAGAAATTCCTCAATGGTTTTTGAAAATTACCGATTATGCTGACGAGCTTTTGCAAGATATCAACAAATTAGATAATTGGCCAGAGGCTGTTAAAACTATGCAAATTAACTGGATTGGTAAATCCAAAGGTTTAACAGTTAAGTTTAAGGTTAAAGACTCTAATCAAGAAATAGAGGTTTTCACAACTCGTCCAGATACTCTTATGGGAGTGAATTATCTTGGAATAGCTCCTGAGCACCCTCTTGCTCTTAAAGAAGCTAAGTCTAATTCTCAA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 872073 . C A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 875910 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 876387 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 878959 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 880451 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 881016 . AATGAAAGAAATATCTGGTATAAAAGTTAAAGTTGAAAGTGGCTCTAAGTACACTACTGATCATGGTTTTTATGCTGTCAAAGATGGTATTAGAAATAAGAAAGAAAATGCTGTGCATGTACGTAAACCAGATTGGTTGAAAGTGCAAAAACAAGATTCTAAAGAATACCTAAAAGTTAAATCCATTACAAAAAAACATAAACTTTCAACAGTTTGTGAAGAAGCAAGGTGCCCTAATATTAATGAGTGCTGGTCTCATGGTACAGCAACAATTATGTTAATGGGGAGTGTATGTACTAGAGCTTGTAAATTTTGTTCTGTAGATACAGGTAATCCAAAAGGTTGGTTAGATAAAGATGAACCTATGAATGCTGCTGAAAGTGTAAAGCTCATGGGACTTGAATATGTTGTA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 884018 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 894300 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 897417 . AATGTTAAAGGGGATTCATAAGTATCTATTGATGTGTTTTGGTACTGTATTGTTTACAGTGCAAGCCAATGCTGCACGGATAATGAGCAATAATCCTATTAAAGAAGATTGGCAATGTAAGGTAGTTGATGGTGAGTGGAGTTGTAAACGAGCAAAGAAACCAAAAAGTGTCTTTGATAAAAAGCTTACTAAAACTGAAAAAGAAAAAGCTCTTGCTGATGATCTGGCATGGGTTAAGAAACCATCATATTTTGTTGGTGGATACTATAGCAATGATAATCAGTTTACCAAAGCTTTGTGTGAGTCTAAAAAGACAGATCTTAGTTATGAGAAGTCTGAGTTTGACAATTATGGTACATTAATAGCGTCAGGAAATGTCCAGGTGCTACAATGTGATCAGGAATTGTATGGTAATAATGCAATAATAAATTTAAATAGTAATAATAGTGCTATAAGATCATTAGTGATGGCTGGAGATGTAATCGTTAAGCAACCATCGACAGGTATAGTCATCCGTACTACAGAGTTAGATGCTGATATGAATAATGGTACTTATAGTACTGGTGAAGCATATTTTAGATTGGCGCGTGAAATGCCAAAAACTAGAATATATGATAAAGAACATTTTAGTGGCTACTTGCGTGGTTATGCTAAAACATTCAAAAAAGAGTCATCAGGAGATATAGTACTTTCTGATGGATATATTACTTCTGGCGATCCGTATGATAATGCTTGGAAGATTACTGGTAATAATATAGATATTGATACCAACACTCATATGGCGTATGTCAAAAATGGTTATTTTGAGATTCAGGATATTCCAGTAATGTATATACCATATTTTTCACATCCAATAGATGATAGAAGAAGATCTGGTTTCTTATATCCAGGTTTTTTACAAAATGCTAACTCTGGTATTGGGATATCTGTACCTTATTATTTTAACCTTGCGCCTAATTATGATTTGATGTTACAAAGTGTTATATGGTCTCAAAGAGGTATCATCGAAAATGGTACTTTCCGTTACATGACTAAATATTTCCAGGGTCAATTTGAGGGTTCATTAGTACCTTATGATTTTAAAGAAGGAAAAATGCGCAGCTCTTTTACTTTGTCAACTACAGGTCAGTATGAAAATATAAACACAAATTTTAAGTATGAATATGTTAGTGACCAAAACTATTATAATGATTTCTCAGCAGGAAATGTTAATTTAGTTACTAAGACATTACTGGATAGAGAATTCGATCTAACTTACACTAATGACTATGTTGATTCTGGGTTAACAGTATTAGACTATGGTGTAGTAAACCCTTTATTAACCGTTGATAACACACCTTATGCTAAGCTACCTGAAGTTAAGTTAAATCTTACGTCGGATGGTTATACACCAGATTATTTGACTTTAAGTGCTCAAACTCTTAATACATTTTTTTATAAAACTGCTGGGCCAGCTAATACTAATCCTGGTGCTCCTCAAGGAACAAATGTTAATGCATTTAGAGCTTATGAATCTCCAAAAATAGCATTCAACTTTAATAAAACATGGGGGTATCTAAAACCTTCATTAGAATTACCTATACGTTACTATAAGCTTAATAATAAGCCTACAGATATTATTAAGTTTAAAAATAGTAATGTTACTAGTGTACTACCAATATTTAATATTGACGCTGGGGCATATTTTGATAAAGATTATACTAATGAAAATGGGACGTATACATCAACCTTACATCCTAGACTATTCTATACTTACATACCGTACCAAGATCAAACAAATATACCATTATTTGATACAAGTTTACAAAATGAACAATATATGCAGATGTTTCAAGTAAATAGATTTACTGGTTATGATAGAATAAACAATGCTAATCAGCTAACATATGCGATAGAAGCTTCAACAACTAATCAAGATAATGGTACTACTTTAGCGTCTGCTAAAATTGGTCAGATGGCTTATTTTGCTGATAGGAAAGTTAATTTGTGTCAAGGAAATTCTGCTTGTCCGAATCCGGGTTTAATGGATCCTTTTTCAACAGATACTTTCTCTCCAATTATGAGCTCATTTGAGTTTCAAGTAATGAAAAATATTTACTTATCAGCTCAAGTGAATTATAGGGTTAAGCAACAAAACGTTGACTATCAAGTCTATCAATTGTCATATAAAGATGAAAATGAGAATATTTTTAACGTTTCATATAATAATATTGCAAATAACTGGAACTCATTGACTCAACAGCAAATAGCAGAAGGTGCTAAGCCTCAACCACAAGAAACTATTACTCTTTCTACAGTGTTAAATATTACTGATCATTGGGGTATTGCAGCGCTATGGAACTATAATTTCCAGCAAAAACAAATAGCTAATATATTTGCAGGGCTGCAATACAATGCCAAATCTTGGGCGGTTAGAGCATTATGGCAGAAGACCGCGTATACTAACCAAGATCCTAATAATCCAACATTACTTGGCCCACTAGTTAATACTTAT A . . NS=1;VF=0.967;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=3.5E-18;SB65=1.8E-11;TYPE=Deletion DP:AO 61:59 NC_009749_FT__subsp_holarctica_FTNF00200 900452 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 901075 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 902320 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 906540 . A ATTGCAATACACTCTAAAACAAATATCCGAGCATCTAAATGCAAAAGTAATTAATGAACCAAGTGGTGAAGTTATTATAACGGGGCTTAACTACGCTGAACAAGCAAAAGAAAATGATCTA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 906540 . AA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion(tandemrepeat) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 906542 . T C . . NS=1;RF=0.885;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 906541 . AT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 906543 . G T . . NS=1;RF=0.885;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 906542 . TG T . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 906543 . GCTTATTGATAAACAAGAACATATTAAGCTTTGGCAAAATTCAAAAGCTGCAGCTGCTATTGTAAGTAAAAAAATTAGTAAAGAATTAGCACAGGTAAATGACAAGCCTCTAATTGTAGTCAATAATGCTGATTTAGCTATGGCTAAAATATTAGAACTTTTTTCTGTGCCATACCCAGAACAAAATGGTATTCATGAAAAAGCTGTAATAGATCCAACTGCTAAAATTGGTAAAAATGTCTCAATTGGACCCGGCGCATATATCGGTAAAAATGTCGAGATTGGTGATAATACGATTATCTATGCCAACGTATGTATCTATAACGATGCAAAAGTTGGAACTAACTGTATTATCTGGCCAAGTGTGACAATTCGTGATAGAACTATTATAGATCATTTTTGTAGGTTATACTCAAACTGTTCAATCGGATCAGATGGTTTTGGCTATAGACCGTCTGAAGATGGTAGAACAATTGTTAGGATTCCACACATTGGTAATGTTGTTATCGGTAGCTTTGTCGATATTGGTTCAAATACTTGTATTAATAATGCTAAATATGGCTCAACTATAATTGGCGATTATACCAAAATTGATAATCTTGTTCAGATAGGTCACAATGTAATTATTGGTAAAGGCTGC G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 907449 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 907464 . AATGGCTCATAATAAAGATATTTATCTAATTTCGGATCTTCATCTAAACGCTAATCATGCTGAGATGGCTGATCTTTTTAAAAAGTTTTTAGATAGCATTACATCTACACAAAACCAGCTTTTTATTCTTGGTGACTTTTTTGATTATTGGATCGGTGATAATCACAGAGATGACTTTTATCATAAAATCACAAATTGGCTAAAAGAAGCTTCAGATCAAGGTTTAGAAATATTTTTC A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 909410 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 910935 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 913726 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 914595 . G GATGGAATTACAAAAATAT . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 916134 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 920062 . TA T . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 920107 . GGTTTAGGCTCAGTAGCTGTGCATGCACGAGTTCTTACAAAAGGGATGATTAGAGCTGCTTGTTATAGATTAAGTGAGTTATCACCGATGGTAATAAATGAGGATATTACTCAGCCATTGTTAGCTAGGATAACAGATTTAGTTGATGTTACAAAAGAAATTACTAAAGCAGTAGCTAAACAAGCAATTCTAGAGGGTGTTCATGGTGTTGATATAGATCTAGAAGATTTAACAGAAACTGAGCTTGATGAAGAGATTGAGAGACTAATTAACCTATCATCATGGACACCGACGTATGCACCATATATGCCAATTTAA G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 921628 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 923874 . ATTGGACAGTATAATAAATATATTTGGAAAATCTAAGAATTATTTAAGTGATATTCTTCATCAAACAAGAGAAAAAGCT A . . NS=1;VF=0.934;SB=1.000;VARSEQ=FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG,NC_019537_FT__subsp_holarctica_F92;SB50=1.4E-17;SB65=4.3E-11;TYPE=Deletion DP:AO 61:57 NC_009749_FT__subsp_holarctica_FTNF00200 923952 . TATGAGAAAAGCTGGATTATTATTAGCTATTTCAAGTTTACCTAGCTGGTTTGGCATTGGTGATTTGGGTAAAAGTGCGTATGAGTTTGTTGATATTTTAAAACAGGCTAGTATTAGAATTTGGCAGGTTTTACCTCTTACAACACTAGGTTTCGGCAACTCTCCATATCAGTCAAGCTCTTCTTTTGCTGGTGATGAAATCTACATTAGCTTAGAAAAACTAGCAGATTATGGTTTGCTTGAAGAATCATCTCTTAAAAAACTAAATGCAAACTCTAAAAAAGTTGAATATGAACTTGTTCGTAATTTCAAAGATAACTATCTCGAAGAAGCATTTAGTAATTTCCAAAGCTCAAAAGATAAGTTTGAACAAGAGTATAATGATTTTATAACTCAGAATTCTTGGGTCAAAAACTATGCTATTTTTAAAGCTTTTAGAAAGGTAAATAATAACCAAGCTTGGAATTTTTGGCCTGCAGAATATAAAAACTGGGTCAAAGAGAAAGCTATAGAACTTGATCAATTTCAACAAGAGATAGATTATCAAATATTTTTACAGTTTATATTTTATAAGCAGTGGTTTGAGCTAAGAGAGTATGCTAATAAAAATAATATTGAAATT T . . NS=1;VF=0.033;SB=1.000;VARSEQ=FT8_H_AG,NC_019537_FT__subsp_holarctica_F92;SB50=0.50;SB65=0.85;TYPE=Deletion DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 924573 . TATGGGTGATTTGCCTATTTATCTAGGTTTTGATTCTGCTGATGTGTGGGAGCATCAAGAAGTATTTTTATTAGATGAGGATCAAAATCCTAGCTTTGTTGCAGGAGTTCCACCTGACTTTTTCTCAGAAACTGGTCAGCTATGGGGTAATCCTCTATATGATTGGGATAAATTCAAAGAAACAAATTTTGATTTTTGGATAGATCGACTAAATGGTAATTTCAAGCTATTTGATATTGTTAGGATTGACCATTTTAGAGCTTTTGATACATATTGGAAGATACCAGCCAGTGAAAAAACTGCTATAAATGGTGAGTGGGTAGAAGCTCCTGGCTATGATTTCTTTGATACAGTCTATAAGCGTATTCCAGATGCTAATATTATTGCGGAAGATTTAGGAGATTTGCGAGATGAAGTATTTGAGCTACGTGATCACTATAATTTAAAGGGTATGAAAGTATTCCCATTTCATTTTGATCTAAAAACAGCTAGA T . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 927381 . C T . . NS=1;RF=0.885;VF=0.115;SB=1.000;VARSEQ=FT37_T_ZH,FT39_T_ZH,FT40_T_ZH,FT43_T_ZH,FT44_T_ZH,FT47_T_ZH,FT75_H_ZH;SB50=0.016;SB65=0.098;TYPE=SNP(transition) DP:AO 61:7 NC_009749_FT__subsp_holarctica_FTNF00200 927600 . T AGGAGCTTCTAAACAAGCTATACAATTAACTAAACAGACATCTATGCATCCAGGTGTTTACGATGCTGGTGCTTTAGCAATTATGAGTTATAGTACTGACAAGCCACAGTTTGGTAAGCCAAAGATGACTCCAGAGATTAAACAGAAAGTAGATGATATCTACAAAGCTATGAACATGATTATAGCTTTAGCTCCTGATGCTGGGACATATGCAAATGAAGCTGATTACTTCCAAAAAAACTGGCAGCAAGTATTTTGGGGTAGTAATTACTCTAAATTACTTAAGATTAAAAACAAATATGATCCAAATGGTCTATTTTATTGTCATCATTGTGTTGGTAGTGAATATTGGCAA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 928026 . C A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 928497 . AT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 928513 . AACGCTGTAAAAGATCTTAATAAAGCAGCTGCTGAAATTTTAGCAAAATAA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 930159 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 931212 . T A . . NS=1;RF=0.918;VF=0.082;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO;SB50=0.063;SB65=0.23;TYPE=SNP(transversion) DP:AO 61:5 NC_009749_FT__subsp_holarctica_FTNF00200 932208 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 932863 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 936481 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 940331 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 940744 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT56_A_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 941641 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 945357 . AATGAAGTTAAGAGTAAAAACAATCTTGTTGTTAGTAACTTTTAGCATGGTATTGTCTAGTTGTGGGATTAAATGGGAAACCCCAGTAAATGAGCGCGATCCTTATGAGAAATATAATAGGAAAGTCTTTTATTGGAATAATAAGTTATATAGTTTTTTAACTCCTGCCGCTAAAGCTTATAATTTTGTTGTTCCTGATACGGTTCAGACAGGTATATTTAATATTTTTCAAAAC A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 946292 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT25_H_BE;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 946452 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 946755 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 946952 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT68_A_SO;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 952682 . C T . . NS=1;RF=0.934;VF=0.066;SB=1.000;VARSEQ=FT18_H_NW,FT36_H_LU,FT48_H_LU,FT57_A_BE;SB50=0.13;SB65=0.36;TYPE=SNP(transition) DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 953799 . AATGGAATTTGCTAAAATAATTTGGGAGAAAAATACGCCTAAATCAGTTTCTTTTGATGATTTTTATTTTTCAACAACGTCTGGTATCCAAGAGAGTATATATAATTTCTTA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 956364 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 957246 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 959182 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 959368 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT56_A_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 961419 . AATGGCTAATATGATTGATAAAATAGATCTTAAGTCTCAGGGATCTAGTAATCTAAGTGGAGAAATGACAAACCATCAGAAAGTAGGCACTCTTTATAAAAGGTTGTTACTCCAAGTTAAGCATTTATGGCATTTTCTGCTTTTGGCTGCTATCGGAAGTATATTTTTCTCAGCGGCTGATGCCTCA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT10_A_JU;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 963279 . A G . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT22_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 963747 . AGTGGAAACTAAAAATATCAAAGATGTTGATGTTATAGCATTATCACTAGGACGTAGATTTTCTGGTATTAATGCTAGC A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 965253 . AATGATTAAGAAGATTATTTATAGTTTATCAATACTATCTTGTAGTTTAGGTTTCTCAGCTAATAGTGATACTAAATATGAAAAAGCTATATTTGCAGGTGGTTGTTTTTGGTGTTTAGAATCAGATTTTGAATAT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 969018 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 973027 . T C . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT43_T_ZH,FT44_T_ZH;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 973029 . A ATTTATCTTTTAG . . NS=1;VF=0.033;SB=1.000;VARSEQ=FT43_T_ZH,FT44_T_ZH;SB50=0.50;SB65=0.85;TYPE=Insertion DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 977380 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 977396 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 977691 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 979927 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 982704 . G A . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT25_H_BE,FT30_H_SG;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 983530 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 984593 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 984603 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 988771 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 990174 . T A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT56_A_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 991577 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 991891 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 992096 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 992666 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 995164 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 997000 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 997740 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1000733 . CAAAAATATGCCAGAAAAGATT C . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT56_A_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1002184 . G A . . NS=1;RF=0.885;VF=0.115;SB=1.000;VARSEQ=FT37_T_ZH,FT39_T_ZH,FT40_T_ZH,FT43_T_ZH,FT44_T_ZH,FT47_T_ZH,FT75_H_ZH;SB50=0.016;SB65=0.098;TYPE=SNP(transition) DP:AO 61:7 NC_009749_FT__subsp_holarctica_FTNF00200 1003920 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1004337 . A AATGATGGCATTTTTATTAGACATTATAACATTTCTACAAATATCTTTTTCTACAAATATCTTTCGGATTAACTATATTAGTTTTAGTAGTTTTGTATTA . . NS=1;VF=0.738;SB=1.000;VARSEQ=FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT33_H_BL,FT36_H_LU,FT38_T_ZH,FT41_T_BL,FT42_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT64_A_ZH,FT65_A_SO,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH;SB50=5.7E-14;SB65=7.6E-9;TYPE=Insertion DP:AO 61:45 NC_009749_FT__subsp_holarctica_FTNF00200 1005825 . A AATGTTTAAAAATAACAATATAATGAGTTTTTTTATAATAATCGTATTGATAATAACCGGAATATCTTTATATATAAAGAATAAAGCTAATAACCAATATCAAATACTTCCTGATAACAGTGGATCTAGCTTAACCAATACCTCTTGGGTTAAAAACAAAGATCTAAATATACCTTATGCTTCATCATCAAATGCGCAAAAACTAGATATTTATTTACCTAATGATAAAAGTTTTGCTAAACCGTATCCTGTTATAATTGCTATACATGGTGGCGCATTCTTAGGTGGTGATAAGGCTGACTATCAACTAAAGCCT . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1006509 . GATGTGGGCAATTGTAGGAAGTAGTGGTTTTGAATCTTTTGATGACTTTGAGATTATAGAAGAATTGCCACGAGAAACGCCATTTGGTTTGTGTTCGAATGGTTTATTTAAAATAAAAGTTGAAGATAAAGAGGTATTATTTCTCAATAGAACTGGTTTGGGTCAGAATATATTACCCCATCAAATAAACTACAAAGCTAATATTTACGCACTAAAGAAATATGGAGCTACTTCAATTATTGCTTTATCTTCGGTTAGAAGCTTAAGAGAAGAGCTAAAACCTGGTGACATGGTTATTCCATATCAGTTTATCGATAGAACCAAATCTCTAAGAGAGTTTACATTTTGTGAACAAGGATTGCTAAACTATGTTTCACTTTCAAAACCTATAACAGAGAGTATTGCCGAAGAGATTAGAGCAAAGAAAAAAGAATTTGATTTTGAGATTCATTTTAAACAAAGTTATGTCTGTATCGAAGGTCCACAGTTTCCAACTATAATCGATGCTAAATGTTTTCAAAGTATGGGTGGTGGTGTTATAGGTATGACAGCATTTCCAGAATTTGCTTTAGCAAGGGAAGCTGGATTGAACTATATTAGCTGTAATTTTATTGTTGACTATGTGCCTTGGTCGTATGATGTTAGAAATTTATATAACGTTTTAGAAATACGTGAAACAAATAATCTCAAAGCAGAAAAATTAGTTAAATGGCTAGTAAATAATTTACCATTTTATGCTGAGAATGATTGTCATGAGTTAGGTATTGCTAGATATCTATCAACACCAATAGAATCATTACCACCAAATAAAAAAGCATGGCTAAAAGTTATCGCTAAAGATAATTCTGAACATGAAGAAGCACTTGAGGCTGAAATTCTTAAAAAAGTTCCAGATTTATATGGTGGTATTAAAACTATACCAGCAAAATTACAAGATTTATTAACCTTTATCGGTAAATATGATCGTGAGGGAAATAGAAAAGATTTAGAAGCAACTCGAAAAGCTGCTGCATCATTAGATCTATATAGCTACCCTAAAGTTGATCTAGAAAATGTTGAAGATATCCAAATCACTCATGATGATGGTCATAATATTCCAGTTAGAGTATATAATCCTAAAGTTGATGAAAAACTCAAA G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT65_A_SO;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1007876 . G T . . NS=1;RF=0.738;VF=0.262;SB=1.000;VARSEQ=FT10_A_JU,FT13_A_BS,FT14_A_BS,FT17_H_LU,FT20_H_JU,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT31_H_BE,FT60_A_JU,FT65_A_SO,FT66_A_SG,FT68_A_SO,FT70_A_SO,FT8_H_AG,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.000031;SB65=0.0020;TYPE=SNP(transversion) DP:AO 61:16 NC_009749_FT__subsp_holarctica_FTNF00200 1007879 . A G . . NS=1;RF=0.738;VF=0.262;SB=1.000;VARSEQ=FT10_A_JU,FT13_A_BS,FT14_A_BS,FT17_H_LU,FT20_H_JU,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT31_H_BE,FT60_A_JU,FT65_A_SO,FT66_A_SG,FT68_A_SO,FT70_A_SO,FT8_H_AG,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.000031;SB65=0.0020;TYPE=SNP(transition) DP:AO 61:16 NC_009749_FT__subsp_holarctica_FTNF00200 1008459 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1008702 . C T . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT49_H_FR,FT69_A_SO;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 1009206 . A AATGTATGTTCTGCGAATACATCGAGTTATC . . NS=1;VF=0.033;SB=1.000;VARSEQ=FT66_A_SG,FT70_A_SO;SB50=0.50;SB65=0.85;TYPE=Insertion DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 1009811 . G A . . NS=1;VF=1.000;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG,NC_019537_FT__subsp_holarctica_F92,NC_019551_FT__subsp_holarctica_FSC200;SB50=8.7E-19;SB65=7.7E-12;TYPE=SNP(transition) DP:AO 61:61 NC_009749_FT__subsp_holarctica_FTNF00200 1011110 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1015254 . AGTGAGTACTAAATTACAAGATCATTTTGAAAAAATAACAAAGATTTTGAGTGGCTTTGGCGTTGAGGGCTGTATATCTTATGGCGAGATAACTTTTTCTATCAGGGATCAGCGTGATATTCATTTAATTTTAAAAAAACTTAAAAAAGAGTATCTTTTTGAGCAGCTTACAGACGTAACAGCTGTTGATTAT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1015679 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1016943 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1017132 . AATGTCTAATCAAAGCTATCTTGGCATTAATATTGATTTATCTAGAGATCGTGAGCTTTCAGAACAAGCTCAACAACTACTGACAAACTATTATTGCTTACAAAATGAACCCTCTCCTCAATATGCTTTTGCACGAGCTGCTGTTGCTTATTCTTTTGGGGATATGAACCTAGCTCAGCGCATTTATGATGCTGCTGCTAAAGGTTGGTTTATGTTTGCTTCACCTGTGCTTTCTAATGCACCACTTCCAGGTGCAAAAGTAAAATCTTTACCTATTAGTTGTTTTTTATCTTATGTGCCAGATTCATTAGAAGGTCTTATCGAGCATTCATCAGAACTTAGATGGTTATCAGTAAAAGGTGGAGGTGTTGGAGGACACTGGTCTAGTGTTCGCGCGGTATCTGATAAAGCTCCAGGACCTATCCCATTTATGCATACAGTTGATGCTGATATGGTTGCCTATAGACAAGGTAAAACTCGTAAAGGTTCATATGCTGCATATATGGACATATCACACCCTGATATAATTGAATTTTTAGGTATCCGTGTGCCAACAGGTGATGTAAATAGAAAATGTCTAAACCTACATCATGCTGTAAATCTGACTGATGATTTTATGCAAGCAGTTGCAAATGACCAAGACTGGAAACTTATTGATCCAGATGACAAAACAGTAAGAG A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1017838 . GAA G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1020838 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1025295 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1030974 . A G . . NS=1;RF=0.918;VF=0.082;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO;SB50=0.063;SB65=0.23;TYPE=SNP(transition) DP:AO 61:5 NC_009749_FT__subsp_holarctica_FTNF00200 1036329 . C A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT68_A_SO;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1036796 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1037031 . A AATG . . NS=1;VF=0.197;SB=1.000;VARSEQ=FT10_A_JU,FT17_H_LU,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT30_H_SG,FT31_H_BE,FT41_T_BL,FT44_T_ZH,FT60_A_JU,FT7_H_AG,FT8_H_AG;SB50=0.00049;SB65=0.011;TYPE=Insertion DP:AO 61:12 NC_009749_FT__subsp_holarctica_FTNF00200 1039158 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1040739 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1040998 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1047610 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1047612 . AGTTGATCCTACTAGAGAAAATATAAAACCTAAACTTGTTGATCTAAAAACCGGAGATTAA A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1047672 . AATGATGAAA A . . NS=1;VF=0.213;SB=1.000;VARSEQ=FT33_H_BL,FT36_H_LU,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT55_A_ZH,FT58_A_SO,FT59_A_FR,FT64_A_ZH,FT67_A_GE,FT68_A_SO,FT69_A_SO;SB50=0.00024;SB65=0.0074;TYPE=Deletion DP:AO 61:13 NC_009749_FT__subsp_holarctica_FTNF00200 1048809 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1050249 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1051746 . AATGCAAAACTATAATGCTAAATCTATCGAAGTTCTTACTGGTTTAGACCCTGTCAAGAAAAGACCAGGAATGTATACTAATATAGAAAATCCAAATCATCTCATCCAAGAAATTATTGATAATAGCGTTGATGAAGTTCTTGCTGGATTTGCTAGCAAAATAAATATCACATTATACGAAGATAACAGTATCGAAGTAGCTGATGATGGTCGTGGTATGCCTGTAGATATTCATCCTGAGCATAAAATGTCTGGTATTGAACTTATCATGACCAAACTTCATTCTGGCGGCAAATTTAGTAACAAAAATTATACTCATTCTGGCGGTCTTCATGGAGTTGGGGTATCTGTTGTTAATGCTTTATCAACTAGACTTGAGGCAGAGATTAAAAGAGATGGTAATGTTTATCATATAGTCTTTGAGGATGGTTTTAAAACTAAAGATCTGGAAATTATTGATAATGTAGGCAAGAAAAATACTGGAACAAAAATTAGATTTTGGCCAAATAAAAAATATTTTGATGATATCAAAGTCAATTTTAAAGCTCTTAAAAATCTGCTTGAAGCAAAAGCGATACTTTGTAAGGCTCTCACAATAAAATATTCAAATGAGATAAAAAAAGAGAAGCTTACATGGCATTTTGAAACTGGACTTAAAGGCTATCTTGACCATAAACTAGAAGCTGAAACACTCCCAGCAGAACCGTTTATAATCGATAATTTCTCAAATGGCGACTCTTATTTAGATGCAGTATTTTGCTGGTGTGAAGATCTTAGTGAAAGTATCAAGAATAGCTATGTAAACCTAATTCCAACACCTCAAGATGGTACACATGTCACCGGACTTAAAAATGGAATTTACGATGCGATTAAGGCGTATATAGAGAAAAACTCCCTTAGT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT10_A_JU;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1052901 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1057134 . C T . . NS=1;RF=0.918;VF=0.082;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO;SB50=0.063;SB65=0.23;TYPE=SNP(transition) DP:AO 61:5 NC_009749_FT__subsp_holarctica_FTNF00200 1057692 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1059416 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1065184 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1065987 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1066684 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1066842 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1066890 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1067082 . A AATGCTATCTCTT . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT10_A_JU;SB50=1.0;SB65=1.0;TYPE=Insertion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1067082 . AATGTGTTTAACAAAATACTCTCGGATTAACTATATCGATGGAAGTATTAATGAGAAAGATGATTTTTATAGATATGTAAATGGCAAATGGTTAGATAATGTTAGTATCCCTGCTGATGAAAACT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1067207 . C T . . NS=1;RF=0.967;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1067206 . TC T . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1067207 . CATGGGGATCTTTT C . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1067552 . C CAAATAGAGATTATTATTTAGATGAAAACGAAAAGTTTGTAAAAATTCG . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1068156 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT30_H_SG;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1070013 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1072639 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1077647 . C T . . NS=1;RF=0.803;VF=0.197;SB=1.000;VARSEQ=FT10_A_JU,FT13_A_BS,FT20_H_JU,FT29_H_LU,FT31_H_BE,FT60_A_JU,FT65_A_SO,FT66_A_SG,FT68_A_SO,FT70_A_SO,FT8_H_AG,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.00049;SB65=0.011;TYPE=SNP(transition) DP:AO 61:12 NC_009749_FT__subsp_holarctica_FTNF00200 1079827 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT30_H_SG;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1080053 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1083898 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT63_A_BL;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1088532 . ATTGACTATTTTTTTATTCTTTAATAGTGATAAAGTTCTAATACTATTATTAAATTTAAGTTCTATTCTTGAT A . . NS=1;VF=0.902;SB=1.000;VARSEQ=FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=5.6E-17;SB65=1.0E-10;TYPE=Deletion DP:AO 61:55 NC_009749_FT__subsp_holarctica_FTNF00200 1091646 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1097871 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1097913 . A AATGAATATTCAAGTTATTAATGATTTTTTTTCGCGACTAGCAAATTATTTTCGAGGATTTAAAAATATAAAGCTTTCGAATATTTTTAATGATTGGAATATTTTTGAAATATTGTGGCTAGTGATTTCTGTAACTAGTCTAGGAATTATAAGTATTTTAACAACAAATGATTATTTAGTTATTACAACTATAGCTACCGTTACTGGT . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1099483 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1099493 . ATCAAAAAAATACAACTATTTTAAATTTACCAACTTATAGCTATGTCGATAGTTTTCTGACAGCAACTTGTTTTAGTGCTTTATATTTTCAAATTACTAGAAGTATTAATGCTTGGTATTTATGGATAACCGCCGATATCATATATATTCCTTTATTTGTCTATAAAGGAGTTGGAATTACTGCTATTCAATATTTGATATTCTTAAATCTTGTCTACTTTACACTAAGAAAATGGCAAATAACCTTAAAAAGACAGCAAAATACCAACGTTGATAACATTATAATGCTCAACAGATG A . . NS=1;VF=0.049;SB=1.000;VARSEQ=FT58_A_SO,FT5_H_AG,FT63_A_BL;SB50=0.25;SB65=0.55;TYPE=Deletion DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 1100788 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1105260 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1107317 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1109350 . CAAG C . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1110204 . GTTGTTTTAT G . . NS=1;VF=0.967;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=3.5E-18;SB65=1.8E-11;TYPE=Deletion DP:AO 61:59 NC_009749_FT__subsp_holarctica_FTNF00200 1111137 . T C . . NS=1;RF=0.918;VF=0.082;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO;SB50=0.063;SB65=0.23;TYPE=SNP(transition) DP:AO 61:5 NC_009749_FT__subsp_holarctica_FTNF00200 1112897 . C T . . NS=1;RF=0.951;VF=0.049;SB=1.000;VARSEQ=FT25_H_BE,FT30_H_SG,FT7_H_AG;SB50=0.25;SB65=0.55;TYPE=SNP(transition) DP:AO 61:3 NC_009749_FT__subsp_holarctica_FTNF00200 1116465 . G A . . NS=1;RF=0.918;VF=0.082;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO;SB50=0.063;SB65=0.23;TYPE=SNP(transition) DP:AO 61:5 NC_009749_FT__subsp_holarctica_FTNF00200 1117835 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1122414 . ATTGCTTACAAATATTGGTGGA A . . NS=1;VF=0.951;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG;SB50=6.9E-18;SB65=2.8E-11;TYPE=Deletion DP:AO 61:58 NC_009749_FT__subsp_holarctica_FTNF00200 1122838 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1124935 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1125202 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT10_A_JU,FT13_A_BS,FT20_H_JU,FT60_A_JU,FT68_A_SO,FT8_H_AG;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1126245 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1128257 . G A . . NS=1;RF=0.934;VF=0.066;SB=1.000;VARSEQ=FT14_A_BS,FT17_H_LU,FT27_H_SG,FT28_H_SG;SB50=0.13;SB65=0.36;TYPE=SNP(transition) DP:AO 61:4 NC_009749_FT__subsp_holarctica_FTNF00200 1128681 . A AATAAATTTA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1128683 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1129046 . G T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT49_H_FR;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1136837 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1141467 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1145322 . G A . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT65_A_SO,FT70_A_SO;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 1147147 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1151833 . C A . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT49_H_FR,FT69_A_SO;SB50=0.50;SB65=0.85;TYPE=SNP(transversion) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 1153447 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1153944 . AATGGCAGGCTTAAAATATGAAGATGCTGGCGTAAATATCGAAGCTGGTAATCAAGCTGTAGAAAGAATGAAGCAGCATGTCAAAAAAACTTTTACCCAAGATGTT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1154075 . C A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1160260 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1163081 . TGAAGATAAAAAACCTGATATTTGGTTCACCAATTCCTAATGCAAAACAGCAAGAACAAAAAATAGGTTTATTTGCCGGTTTTGCGATACTTTCTTCAAATGCACTATCTTCTGTATCATATGCAACAGGAGAGATATTTATAGTCTTGGCAACTGCTGGAGCAGCAGCTGTTATGCAATACTCGATCGAAGTATCAATAATGGTGATATTACTAATATTATTGATGGGTTTTTCATATACACAAGTAATACGTGCTCATCCAGAAGGCGGTGGTTCTTACTCAATAGTTAAAACACATTTTAATGA TG . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1163422 . AT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1164954 . GATGTTATCTAATCAAAGTACA G . . NS=1;VF=0.033;SB=1.000;VARSEQ=FT66_A_SG,FT70_A_SO;SB50=0.50;SB65=0.85;TYPE=Deletion DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 1165131 . T C . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT14_A_BS;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1168409 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1169462 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1171242 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1175526 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1176465 . GTTGGCTAAACAAGCTAAAGATCAAGGTGCTGAGATTGTTGTTTTTCCTGAAGATAATTCAGTTAATCTAATTG G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1176555 . TAA T . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1177706 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1177774 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1178251 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1178790 . GATGTTACATTGGTTTCCCGGGCAT G . . NS=1;VF=0.967;SB=1.000;VARSEQ=FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG,NC_019537_FT__subsp_holarctica_F92;SB50=3.5E-18;SB65=1.8E-11;TYPE=Deletion DP:AO 61:59 NC_009749_FT__subsp_holarctica_FTNF00200 1179761 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1179837 . GATCA G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT67_A_GE;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1179862 . ATTGATGCTGGTGGTGGGACATATCTTAGATTTGGTCAATCAGGAGCTAGATTAGAAGATTTAGACTCAATCAATATGACTCATTTCCATGCGGATCATTCAGCAGATATTCCAGCGATATTAAAAGGAGCATATTTCTCCAAAAGACAGAGAATCTTCCGTTCTCAGTTCCTACACATTCAGGTCTTTTCCCAAGCGCGATGGATTTTCTTCAAAGAGTATTTGGAAAAGATCATGGTGCTTTTGCATATTTGCATGGAATACTTACGGGTACAGATGGTTTCCCTTTTAAGCTTGATCCTGTAA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT67_A_GE;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1182131 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1182772 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1185315 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1189367 . TAAA T . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1190939 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1190950 . A G . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1194807 . C T . . NS=1;RF=0.885;VF=0.115;SB=1.000;VARSEQ=FT37_T_ZH,FT39_T_ZH,FT40_T_ZH,FT43_T_ZH,FT44_T_ZH,FT47_T_ZH,FT75_H_ZH;SB50=0.016;SB65=0.098;TYPE=SNP(transition) DP:AO 61:7 NC_009749_FT__subsp_holarctica_FTNF00200 1195414 . TTAGTTGATAAACTAATCCAACGCTGGTTTGATAGAAGAGTAAATTATGTGGAGGTTT T . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1195503 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1200340 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1202412 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1203520 . A C . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT14_A_BS;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1206688 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1207042 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1208279 . A T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1209868 . AT A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion(tandemrepeat) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1209894 . A AGCTTTTCTAA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1213164 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1213899 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT10_A_JU;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1217808 . A AATG . . NS=1;VF=0.738;SB=1.000;VARSEQ=FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT33_H_BL,FT36_H_LU,FT38_T_ZH,FT41_T_BL,FT42_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT73_H_LU,FT75_H_ZH,FT7_H_AG;SB50=5.7E-14;SB65=7.6E-9;TYPE=Insertion DP:AO 61:45 NC_009749_FT__subsp_holarctica_FTNF00200 1217808 . AATGGCATTTTTATTAGACATTATAACATTTCTACAAATATCTTTTTCTACAAATATCTTTCGGATTAACTATAAATGGGTTAGTGATGGCTATGATGAATACAAGAAACGTTTAAGTAAATTAATACCGCTTGAATTAATCGAACTGCCAATAGCTAAACGCACCAAAACTGGTAATCCTAAGCTTTGG A . . NS=1;VF=0.197;SB=1.000;VARSEQ=FT10_A_JU,FT17_H_LU,FT28_H_SG,FT32_H_LU,FT37_T_ZH,FT39_T_ZH,FT40_T_ZH,FT43_T_ZH,FT47_T_ZH,FT57_A_BE,FT71_A_BS,FT8_H_AG;SB50=0.00049;SB65=0.011;TYPE=Deletion DP:AO 61:12 NC_009749_FT__subsp_holarctica_FTNF00200 1221536 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1222708 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1226041 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1227265 . G GATC . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1228377 . T C . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT56_A_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1229812 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1230051 . GATGTCATTTAATACAGAAATCTTTTTGAATATAAACAAGTATGAACAAAGAATAGCCATAAAAGAAAACAATATCCTCAAAGAAATTTTGATAGAACGTGATAATCAAAAAAGAATAGTTGGAAACATTTATAAAGGAAAAATAATCAGAGTTCTTCCTGGAATGCAAGCAGCTTTTGTAGATATTGGTTTAGAAAAGGCAGGATTTTTACATTTATCAGAAGTCATACCTCTAGAGAAGGAAGATGATGATTCTGATGAAAATTTTAAGCTCAAAAAATTAAATACCAAAGATATCAATAAATGGCTACGTGAAGGTCAAGAAGTTCTAGTTCAAGTAGTCAAAGAGAGCATAGGTAATAAAGGAGTAAAATTAACATCACATTTATCAGTATCTTCACGTTTTTTGGTTTTTTTACCTGATTTAGATCATATAGGTGTTTCACTTAAGATAACAAATGAACAAGAAAAGCAACGTCTATTAGAATCCATAAAAAAAATTACCCAAAGTGAAAATCCACGTGGATATATTCTAAGAACAGCTGCTGAAGGCGCTAGTTATGAAGAATTAGAGAATGATATAAAATTTTTGAATAACTTATGGCAAGATATTTTAGATATTTCTAGTACAATCATCAAACCTGGTGTTGTTTATGAAGATTTTAGTTTAATAATCAAGACTATCAATATATTTGCTAATGATAATCTCGATAAAATACTTGTAGATAATATCGATTCATATAAAGAAATATGCCACTTTGCAGATAAATATATTCCTGGTTTAAGAGAGAAAATAGAACTTTATCAAAAGCATAATATCTTTGAAGAGTATGATATTGAAAATGAGATAAATAAAGCTTTAGATAAA G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1232387 . C A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT32_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1232388 . GATATTGGCAAAGGTGCATAGAGATAATATCTGTCTTGAGCATGATAGATTATATCCACAATATGGTTTTGCTAAACATAAGGGTTATCCAACAAAAGAGCATTTAGAGAATAT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT32_H_LU;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1232501 . TA T . . NS=1;VF=0.033;SB=1.000;VARSEQ=FT26_H_VD,FT32_H_LU;SB50=0.50;SB65=0.85;TYPE=Deletion(tandemrepeat) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 1232502 . AAAAAAATATGGTGTATTAG A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT32_H_LU;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1232521 . GATATCCATAGGAAAAGTTATAAACCAGTACAAGTGTTATTAAATGAATAA G . . NS=1;VF=0.033;SB=1.000;VARSEQ=FT26_H_VD,FT32_H_LU;SB50=0.50;SB65=0.85;TYPE=Deletion DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 1232973 . AGTGAGTAAGTACAGCATACATAATGATCCGAATAAGGATATTGAAGCGCAAAAATATGAAAATCCAATTCCAAGTAGGGAAGTGATTTTAAATTATATAAGAGATGTAAAACTTCCTGTAAGCATTGAAAATATAGCAAATGCTTTAGAGATTTTTAAAAAAAATCTTTTCGAAGGTCTTGTAAATCGTTTGGGTGCAATGGTTAGAGATGGTCAGCTAGAGAAGGATAGATCATATTATAATTTGCCGGAAATGGCGCCAATATATATCACATCTAAAGTTACTGCAGATAGAGATTCTCGTTTAGAGCTATTTAGCCATACTCTAAATACAAAGGTAGGTATAGTATCTCATCAAGCAAAAATGGTAATGGTTGGTGATGAGGTAACTGCAAAAGTTCTTGGGCTTAATAAGCGTGGTCGAATAGATGCTGAAATTAAAACCATAGTGACAAGAGCTCAGAAGACAGTCACGGGCTATTATTATAAGAGCTTTGATTGTGATTTTATTAAGCCGATAAGCAAAAGCATAATAAGTGACATAGTGCTATTACCACCAAAGCAAAAAATAGAGCATAACTCTTTAATAGAAGCTGAGATTATTGTTTATCCTAGTATAAGTAGTGCAGCTGTTGCTAAATTTAAGCAAGAGGTCGAAGCAGTATCTCCAGTTAAAGAAGCGATGATGATGACAACACAGAAGTATGATTTAATTGAGCAGTGGAGTAAAAAGGCTTTACGCTATTTAGATAATATTT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1233731 . T C . . NS=1;RF=0.885;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1233730 . TT T . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion(tandemrepeat) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1233731 . TTGATGACGTGGTTGTTGGCAACAGGGTTGATCTACGTAATCAACACTTTGTAACAATTGATGGTGAAGATGCTAAGGATTTTGATGATGCAGTTTATGCACATAAGACTAAAAGTGGTAGTTGGAAGTTATATGTAG T . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1233869 . C T . . NS=1;RF=0.967;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1233868 . GC G . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1233869 . CAATTGCAGATGTCTCAAACTATGTTGAGAAAGATTCAGCTTTGGATTTAGACGCTAAGCGTCGTTCTACTTCA C . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1235920 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1238268 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1243000 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1244448 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1245291 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1248021 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1248403 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1252150 . G A . . NS=1;RF=0.918;VF=0.082;SB=1.000;VARSEQ=FT26_H_VD,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT59_A_FR;SB50=0.063;SB65=0.23;TYPE=SNP(transition) DP:AO 61:5 NC_009749_FT__subsp_holarctica_FTNF00200 1253175 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1254517 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1256257 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1259527 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1260030 . AATGTCAGAAAATTTCAAAGAACTATTTGAGCAATCTCTTAAACAAACAGAGATGAGAATAGGTAAAATCATCGAAGCAACTGTAGTAAGCATAGACAAAGAATTTGCAATGATTGATGCTGGTCTTAAGTCAGAATCATTCATCCCTGTATCTTCTTTAAAAAATAGCAATGGTGAGCTAGAAGTTGCTGCTGGTGATAGAATCAACGTTGTTTTAGAAGCTCTAGACAACAGCTGTGGTGAAACTAGATTATCAAGAGATAAAGCTAAGAAAATCGAGCTTTGGGATAGAATTGAAAAAGCTTTCGAAAATAACGAAACAGTTCTTGGTAAAATCACTAATCACGTTCGTGGTGGTTACACT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1261263 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1263970 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1266294 . G A . . NS=1;RF=0.918;VF=0.082;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO;SB50=0.063;SB65=0.23;TYPE=SNP(transition) DP:AO 61:5 NC_009749_FT__subsp_holarctica_FTNF00200 1266363 . T C . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT27_H_SG,FT28_H_SG;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 1266534 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT16_A_BE;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1266819 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1267045 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1271922 . A AATGCTTGTGCTGCTCCTGGGGGTAACTTCACATATTTTAGAATGCGCTCCGCAAGCGGATATTACTGCTATAGATATTATTGATAAGCGTTTAGAACTTCTTAGAGAAAACTTAGAGAGATTATCTGAAAATCATAATGTCAATGTTTTTAAACATGAT . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT25_H_BE;SB50=1.0;SB65=1.0;TYPE=Insertion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1272125 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1275428 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1279412 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT59_A_FR;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1279876 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1280124 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1281570 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1282642 . T TCA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1282665 . G GATTCTTCCCAGCGTTTACAGGTCTTACCCAGTTTGTTTTATACATTGGTACAACACTTTCTGCTGCCCCTTTAGTTTTTCTGTCTGAATACCTTAGCATTTCGGAAATTATGGCTTTGATATTCGTAATTTCTTTTATATTACTATTATTTAGTATTTTTGTGATCAAAACTCACCCTGATTATAAAAAAGAAAATAAACATAACAACAAACAAAGCCAAACTCTAAAAGATATTTTAGCGGTACTGAAAAACAAGCAAATCTGGTTTAATGGTTTATTCTGTTTTACGATATATGGTACTACTGTACTATTTGCAGATTTATGGGGTATAAGATATCTGACCTTATATGGTTTTAGCCAAAGTCAAGCAGGTCTTTACTTATCTTTATCGGCGTATGTATCTTTAGTCCGATTTGGGGAGTTATAG . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1284294 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT7_H_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1290527 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1296107 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1296398 . ATGACCAGTACCAAAAAGAAGTTTCCCAAGCTGGTACAGCAGATACCTCTAAACAAGCTTCTAAATA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT50_H_SG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1298045 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1298066 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1299661 . G T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1299824 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1300370 . A T . . NS=1;RF=0.885;VF=0.115;SB=1.000;VARSEQ=FT37_T_ZH,FT39_T_ZH,FT40_T_ZH,FT43_T_ZH,FT44_T_ZH,FT47_T_ZH,FT75_H_ZH;SB50=0.016;SB65=0.098;TYPE=SNP(transversion) DP:AO 61:7 NC_009749_FT__subsp_holarctica_FTNF00200 1306300 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1309385 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1310424 . AATGGATTTTAATCATATTTTAATGGTCGCATTAATGGCTGCTATTCCACTGATTTTTGCAATTACTATCCATGAGGCTGCTCATGCTTTTGTAGCTAAAATTCGTGGTGATGATAGCGCCTATAGATTGGGTAGAGTAACATTAAACCCTGTATCTCATATTGATCCTATTGGCACTATTGTATTTCCTGGATTAATGCTTATTTCATCAATTTCATTTGGATTTCCTTTTATTTTTGGTTGGGCAAAACCTGTTCCTATTGACTATACCAAACTTAAAAGACCTAAGATAGATACTATATCAGTTGCCATTGCAGGACCATTAGCAAACTTAGCAATGGCTTTTATTTGGGCAATAGTAGCAAAATATATTACTCTTCATCCATACATCCAAGGA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1313246 . A G . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT20_H_JU,FT60_A_JU;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 1317813 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1319378 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1319450 . C T . . NS=1;RF=0.918;VF=0.082;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO;SB50=0.063;SB65=0.23;TYPE=SNP(transition) DP:AO 61:5 NC_009749_FT__subsp_holarctica_FTNF00200 1321293 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1321624 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1322298 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT37_T_ZH;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1324053 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT7_H_AG;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1326988 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1328231 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT39_T_ZH;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1329930 . A AATGAAGAAGCTAATAACAATCTTTTTGTTG . . NS=1;VF=0.574;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT5_H_AG,FT60_A_JU,FT73_H_LU,FT7_H_AG;SB50=5.8E-11;SB65=5.7E-7;TYPE=Insertion DP:AO 61:35 NC_009749_FT__subsp_holarctica_FTNF00200 1329930 . AATGCTA A . . NS=1;VF=0.393;SB=1.000;VARSEQ=FT14_A_BS,FT25_H_BE,FT33_H_BL,FT36_H_LU,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT75_H_ZH,FT8_H_AG;SB50=1.2E-7;SB65=0.000065;TYPE=Deletion DP:AO 61:24 NC_009749_FT__subsp_holarctica_FTNF00200 1329936 . AATGTTAAATAATGCTTATTCAGATATCTCTTCATCTATGTTTCAAAATGCTTTTAACTCGGGTATTGATGCAACATCTCCGGTATCAATGAATGTATCAGATAAAAAATATCTTGTGAATAAGACGGTAGCGATAGTAAATAGTAGACCAATTACATCTTTTGAGCTGGATCAAGAGCTGGCTAAGCTAGAAGCTATGCAGCCAAATTCAGCCTTTAATACAGATCCTCTAAAACTAAAAAGACAAGCATTACAAGATTTGATATCTCAGAGTGTTTTATTACAGCTTGCAGAGCGCAATAATATTATGATATCTAATCAACAACTAGATAGTGCTATACAAGATATTGCAGCAAAAAATGGCGTTTCAGTAGAGTCTTTAAAGCTTAATGTCGAAGCAGCCGGAATGTCTTTTGATAGTTATAAAAAAAGAATAAGAGATCAGTTGATGATAAGTCAACTACAACAGCAGGCTATAGCACAGCAAGTATATGTCTCACCAGAAGAAATACAAAAATATATTAAAAAACATCAAAAAGAATTTGATAGGGAAATGTCGCCTGTTAAATTATATACACTTAAAAATCTAATTGTAGCTTTGCCAGATTCTAAAAAAGCACGCCAGAAGAAAATAGATTTGTTTAAAAAACTAGCTCTTGCAGTTAATAATGGCAGTATTGATTTTTCTGAAATTGTCAAACAGTTTTCCCAAGCGCCAAATGCAGTTTCCGGAGGTATAGTTAGTCAACAGGTTAAATTTGATTCAATACCAGATATATATAAGGAATATATTAAAGAACTTAAAAATCATCAAGTTTCACAACCATTTATAGTTAATCATACATTACAG A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1331281 . G T . . NS=1;RF=0.918;VF=0.082;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO;SB50=0.063;SB65=0.23;TYPE=SNP(transversion) DP:AO 61:5 NC_009749_FT__subsp_holarctica_FTNF00200 1331314 . TCTAATTATTCAGATCAAGATATTTTTTTTATGCAAAAAGCTTATCAGCAGGCATTGTTAGCTTATCAAGCTGGTGAAGTTCCGATAGGTGCAGTGCTTGTCAGGGATGATCA ATC . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1331441 . AT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion(tandemrepeat) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1333428 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT22_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1333642 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1335886 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1335924 . GGTGGCGAAATTATATTTTAGATATTCGGCT G . . NS=1;VF=0.230;SB=1.000;VARSEQ=FT55_A_ZH,FT56_A_AG,FT58_A_SO,FT59_A_FR,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT75_H_ZH;SB50=0.00012;SB65=0.0048;TYPE=Deletion DP:AO 61:14 NC_009749_FT__subsp_holarctica_FTNF00200 1337526 . C T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT59_A_FR;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1340464 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1341115 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT71_A_BS;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1341628 . GGTGGTTCAGCAGCTTCTTCTGTTGCTGCTCTAGTCGCGATGAATGCTTTTTTTGAAACACCGTATAACTATGATGATTTGATTGACTATGCTATCTATGGAGAGAGTTTGATATCAGGATCATTTCACGGTGATAATGCTGTGCCGTGCATGTTTGGCGGATTAGTATTGTTACAAAGCTCGAAACCATGCAAAAAAATAGACTTACCAATAGTTGACTGTAATGTGGTTATAGTTTGTCCTGATCTTTCAATTGAGACTAAAAAAGCGCGTGAGCTTTTAAAGGATCCTTATGATTTATCTACAATAGTTGA CT . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1341943 . CATA TGCC . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Substitution DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1343153 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1346079 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1347645 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1347847 . CAAA C . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1354089 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1355007 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1355196 . ATTGAAAGTA A . . NS=1;VF=0.557;SB=1.000;VARSEQ=FT11_A_JU,FT13_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT30_H_SG,FT32_H_LU,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT5_H_AG,FT60_A_JU,FT73_H_LU,FT8_H_AG;SB50=1.2E-10;SB65=8.7E-7;TYPE=Deletion DP:AO 61:34 NC_009749_FT__subsp_holarctica_FTNF00200 1355205 . AGTGCGTAGATATTTATTAATATCCTTGGGTATATTTGCTTATTGTGCTAGTAGTATAGCTAATCCTGTAGCTGACTATACTAGTACGATAAATCAATCAATAAATAATTCACCACAGTATAAGTTTATTGGCTTTCAGCTTAACTCAAGGCAAATGAGCCCAGCGATACAGCTAGGTAGATTATTACCAAGTATAGATATCGGTGGTTCAATTACAGCAACAAATATTTTAGATAAAAGAACAATAGCCGATGGTGATATTGCTGGTGGACGTTTTGATTCGATTCAAGGTTTGGTAACTCTAACCCAACCACTATATGATTATGGTGCGTATAAGGATTTACAATCAGCTGAGGAAACAGCACAGTTTGCCCAACAGGATTATAGAACAAATTATCAGCAATTTTTATATGAT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT8_H_AG;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1359343 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1360921 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1360923 . C A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT22_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1362738 . AATGTTAAGCCAGAAACCAAAAATAATTGGTATATTTTTAATGTTCCTTAGCCTTACC A . . NS=1;VF=0.967;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=3.5E-18;SB65=1.8E-11;TYPE=Deletion DP:AO 61:59 NC_009749_FT__subsp_holarctica_FTNF00200 1366284 . G T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019551_FT__subsp_holarctica_FSC200;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1369734 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1372216 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1372856 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1373340 . AATGGCTAATATTATATTTATAGATAATTTTGATTCTTTCTCTTATAATTTAGTTGATGAATTTAGAGTTTTAGGTAATCATGTTGAGGTATATAGGAATAACTTATATCTAGATGTTTTATTAGATAAAATAAACTCAGTAGATAATCCTATAGTT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1374589 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT33_H_BL;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1374771 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1375498 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1377784 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT31_H_BE;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1378004 . G C . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT59_A_FR;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1379145 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1381011 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1383163 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1383219 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1384368 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1391918 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1394470 . AT A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1394488 . GTAGCCTTTGGTAGATTACCTCATATATAA G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1394934 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1396992 . G T . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT17_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1397016 . T C . . NS=1;VF=1.000;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG,NC_019537_FT__subsp_holarctica_F92,NC_019551_FT__subsp_holarctica_FSC200;SB50=8.7E-19;SB65=7.7E-12;TYPE=SNP(transition) DP:AO 61:61 NC_009749_FT__subsp_holarctica_FTNF00200 1397254 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1397769 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT57_A_BE;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1397985 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1398939 . AATCAAGGAATTTTTA A . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1398956 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1399515 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1399840 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1400713 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1401191 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1402752 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1405795 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1407835 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1412446 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1413783 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1415078 . A G . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT65_A_SO,FT70_A_SO;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 1419204 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1428188 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1429137 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT68_A_SO;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1433606 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1434951 . A G . . NS=1;VF=1.000;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG,NC_019537_FT__subsp_holarctica_F92,NC_019551_FT__subsp_holarctica_FSC200;SB50=8.7E-19;SB65=7.7E-12;TYPE=SNP(transition) DP:AO 61:61 NC_009749_FT__subsp_holarctica_FTNF00200 1436229 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT41_T_BL;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1439103 . AATGAATAAAACTCAATTTATTCTTGAACCTTATAACTACGATGCAATGATGCTACTTTGTGGCAACCTTGATGAAAATATTCGTGCTGTCGAAAATTATTTTGATGTCGAGATTCGGCATCGTGCCGATGAGTTTGAGATCACTAGTGATTCAAGCACTAACAATACCCAGGCGAAAAGATTTATCAAATCTTGCTATGCTGAGATTCTAGCTGGCAATACTGAATTTGATTTAGAGCAGATTACAACTATCCTTAATGCTACTGCTAAAGATAAAGCTGCTGCAACTGCTAAGTCACGTAAAAAAGTTGAAGAAGCTGAAGTTCAA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT40_T_ZH;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1439719 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1439997 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1447839 . G A . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT29_H_LU,FT66_A_SG;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 1453404 . AATGAAAAAAGGTTTAATTCCACTGATGTTAGGTGGTCTTGCGATAGGGATGACAGAATTTATCATGATGGGAATACTTCCTCAGGTAGCAGGGTATTTTAATGTGAGTATTCCAGAGGCAGGACACTTGATAAGTATATATGCATTAGGAGTTGTCGTTGGAGCACCACTATTAATATTTTTCTCATCAAGATATAGCCCTAAAAAGTTACTTATAGTGATAAGTATTATGTTGATATTATTTAATGGTTTATCAATATTTGCGACAAATTATGAGTTTTTA A . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT10_A_JU;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1453965 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1455748 . TTTAAGGTTACTGTAATAGCAGATGCATGTAATGCCGCTAGTCAACAAGCTCATGAAGCTAGCTTAACAAACTTAAGTAGAATTGCTGATATTGTAGATATTGATGATTTTATTT T . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1458779 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT22_H_LU;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1459528 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1459530 . G GTATTTTGCAATTTTAAGTGGCTTCTTTAGTGCAGGACTTTTATTCGCTGGCTTGATTGTGACTTGTGGTTTAGCAGTGATGTTAGAGTTTTTACCATACAATAGGAAAAAATAA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1460826 . GATGGCTTGGATTGCAGACTTTAATCAGCCGAATACTTATACTGAAATGTATACATGTGATAGTGACAATAATTACGGACATTATTGCGATAAAGAAGCTGATGAAATTTATAACAAATCACTAACTACTAACTCT G . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1463627 . A C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1464789 . T C . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1467405 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1468436 . C T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1469914 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1470181 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1470765 . A AATGGTTTCCAACCTTATAACACTCTTTTATGGGCTGGTGACCAAT . . NS=1;VF=0.984;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG,NC_019551_FT__subsp_holarctica_FSC200;SB50=1.7E-18;SB65=1.2E-11;TYPE=Insertion DP:AO 61:60 NC_009749_FT__subsp_holarctica_FTNF00200 1471149 . TGATA T . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1471174 . GGTGAAGATCTTTTATTAGCTCCTGTACATCAACAAGGTGTTACAGAATGGGATGTATATCTGCCAAAAGGTGATGATTGGATACATATATACTCAAATAAAGAATACAAAGGTGGACAAACTATAACTGTGAAAGCAGAAATTGGCTATCCTCCCGTATTCTATAAAAAAGGGACTTATCATAGTAAGCTCTTTAATTCCCTTAAAGATATTAAATAA G . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Deletion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1471773 . TA T . . NS=1;VF=0.033;SB=1.000;VARSEQ=FT31_H_BE,FT33_H_BL;SB50=0.50;SB65=0.85;TYPE=Deletion(tandemrepeat) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 1471789 . ATTGAATTTATTGAACTTTTATATCAGCTTTATACTAGATCAAATCAGCAAAATCAAAGTAATCCTAATCAAATTCAAATTATGTCGATGCATCGAGCTAAAGGTTTAGAGTGGGATTATGTTGTAGTTCATGATGCTACAGAAGGTGGTTTTTTTGGTGATAAAAATACCAAAGTTGATGATGAAATTATAGAAGAAGAACGACGACTATTTTATGTTGCGATTACACGAGTTAAGAAACATTTGTTTATAGTTTCATCTGATGATATAACACGTTTATCATCTTG A . . NS=1;VF=0.033;SB=1.000;VARSEQ=FT31_H_BE,FT33_H_BL;SB50=0.50;SB65=0.85;TYPE=Deletion DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 1472076 . G A . . NS=1;RF=0.885;VF=0.082;SB=1.000;VARSEQ=FT29_H_LU,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.063;SB65=0.23;TYPE=SNP(transition) DP:AO 61:5 NC_009749_FT__subsp_holarctica_FTNF00200 1472075 . GG G . . NS=1;VF=0.033;SB=1.000;VARSEQ=FT31_H_BE,FT33_H_BL;SB50=0.50;SB65=0.85;TYPE=Deletion DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 1472076 . GTATCAAATTAGAAAAAATACTTATACACGTGATTTGAAATGTAAGAATAGCCTAAGATTTTTATATGAAGGAAATTTAGTTGAGTGTGAGAATTATCTTGATAAGTCTAATTACCATGAGGATACTAAAAAACTTGATAATATAATCTTTAAAAGATATCACGACAAAATTACAACTGAGGTTGACTAG G . . NS=1;VF=0.115;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT33_H_BL,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.016;SB65=0.098;TYPE=Deletion DP:AO 61:7 NC_009749_FT__subsp_holarctica_FTNF00200 1473341 . C A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1473382 . T G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1473885 . AG A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1473901 . ATTTCTCAACCACAAGCAAAACTTAAACAAGCTCTAGCAAAAATTAAGCCAGAAAATATTGTTTTGGAAACAGACTCTCCAGATATGTTGCTTTATAACAGTACTGACAATATTAATACTCCAGAAAACATCCCTAAGATTTTTGAGTTATTAAGCAATATTTATCAACTAAATCCTGATATACTAAAACAACAAATTTATAATACTAGCTTAGAATTTATCTAG A . . NS=1;VF=0.016;SB=1.000;VARSEQ=NC_019537_FT__subsp_holarctica_F92;SB50=1.0;SB65=1.0;TYPE=Deletion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1474125 . G GTTGCAAAAATTAAAACTTAGAAATTACATATGTTATGGG . . NS=1;VF=0.967;SB=1.000;VARSEQ=FT10_A_JU,FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT19_H_BE,FT20_H_JU,FT22_H_LU,FT24_H_ZH,FT25_H_BE,FT26_H_VD,FT27_H_SG,FT28_H_SG,FT29_H_LU,FT30_H_SG,FT31_H_BE,FT32_H_LU,FT33_H_BL,FT36_H_LU,FT37_T_ZH,FT38_T_ZH,FT39_T_ZH,FT40_T_ZH,FT41_T_BL,FT42_T_ZH,FT43_T_ZH,FT44_T_ZH,FT45_T_ZH,FT46_T_ZH,FT47_T_ZH,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT5_H_AG,FT60_A_JU,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT73_H_LU,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=3.5E-18;SB65=1.8E-11;TYPE=Insertion DP:AO 61:59 NC_009749_FT__subsp_holarctica_FTNF00200 1475025 . A ATTGTACTTTTAT . . NS=1;VF=0.016;SB=1.000;VARSEQ=FT65_A_SO;SB50=1.0;SB65=1.0;TYPE=Insertion DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1475025 . A ATTGGCTACTGAGAAACTATTTTTGTGCACAGAACCTAGTTTATTTAGGTTTCTATATAAAAGTAAAAATATTGCTATCGAAAAGAAAAAAGCTGAAACAAAAGATGGTTATGATGATTTTAGAGATATCAATGCTATATTTAAAGCTTTAGAGCTTGGAGCTATAGTAGTTTCAGTTATATTGATT . . NS=1;VF=0.082;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO;SB50=0.063;SB65=0.23;TYPE=Insertion DP:AO 61:5 NC_009749_FT__subsp_holarctica_FTNF00200 1475030 . AG CA . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Substitution DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1475036 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1475037 . T TCGTGTTCCTCTTACTGCTTTAGGAGCTTTCAGTGGTGTTGCCTTGGCTGGTTTAACTCTTTCGCAAAGTACTCTGTTG . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1478616 . G A . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT27_H_SG,FT28_H_SG;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 1479276 . A AATGCTGGCTATACTTTGCAAAGTCTTGACACATTATTTAATAGAAATACAGGTAATTGCTAAA . . NS=1;VF=0.590;SB=1.000;VARSEQ=FT11_A_JU,FT13_A_BS,FT14_A_BS,FT16_A_BE,FT17_H_LU,FT18_H_NW,FT20_H_JU,FT22_H_LU,FT28_H_SG,FT31_H_BE,FT33_H_BL,FT36_H_LU,FT48_H_LU,FT49_H_FR,FT50_H_SG,FT51_H_ZH,FT52_T_LU,FT53_T_LU,FT54_T_LU,FT55_A_ZH,FT56_A_AG,FT57_A_BE,FT58_A_SO,FT59_A_FR,FT63_A_BL,FT64_A_ZH,FT65_A_SO,FT66_A_SG,FT67_A_GE,FT68_A_SO,FT69_A_SO,FT70_A_SO,FT71_A_BS,FT75_H_ZH,FT7_H_AG,FT8_H_AG;SB50=2.9E-11;SB65=3.7E-7;TYPE=Insertion DP:AO 61:36 NC_009749_FT__subsp_holarctica_FTNF00200 1479750 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1480172 . G T . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT10_A_JU,FT13_A_BS,FT20_H_JU,FT60_A_JU,FT68_A_SO,FT8_H_AG;SB50=0.031;SB65=0.15;TYPE=SNP(transversion) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1480250 . A G . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1484368 . C T . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT10_A_JU,FT8_H_AG;SB50=0.50;SB65=0.85;TYPE=SNP(transition) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 1485577 . G T . . NS=1;RF=0.967;VF=0.033;SB=1.000;VARSEQ=FT11_A_JU,FT16_A_BE;SB50=0.50;SB65=0.85;TYPE=SNP(transversion) DP:AO 61:2 NC_009749_FT__subsp_holarctica_FTNF00200 1485791 . T G . . NS=1;RF=0.918;VF=0.082;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO;SB50=0.063;SB65=0.23;TYPE=SNP(transversion) DP:AO 61:5 NC_009749_FT__subsp_holarctica_FTNF00200 1488665 . GT CATACATTGTTGACGATAAAGACCTATCACGGCAACTGACAGATGTTTTTGAGCAGCTTTGGGATAGTAAATATGCTCATACATATTCGCAACCTGTTGGTATAATATCAACTCCGTCTTGTACC . . NS=1;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=Insertion DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1488668 . G A . . NS=1;RF=0.902;VF=0.098;SB=1.000;VARSEQ=FT29_H_LU,FT31_H_BE,FT65_A_SO,FT66_A_SG,FT70_A_SO,NC_019551_FT__subsp_holarctica_FSC200;SB50=0.031;SB65=0.15;TYPE=SNP(transition) DP:AO 61:6 NC_009749_FT__subsp_holarctica_FTNF00200 1491416 . C A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT25_H_BE;SB50=1.0;SB65=1.0;TYPE=SNP(transversion) DP:AO 61:1 NC_009749_FT__subsp_holarctica_FTNF00200 1492735 . G A . . NS=1;RF=0.984;VF=0.016;SB=1.000;VARSEQ=FT66_A_SG;SB50=1.0;SB65=1.0;TYPE=SNP(transition) DP:AO 61:1