Length-dependent stability and strand length limits in antiparallel beta -sheet secondary structure -- Data Supplement - Supporting Information -- Proceedings of the National Academy of Sciences

Supporting information for Stanger et al. (October 2, 2001) Proc. Natl. Acad. Sci. USA, 10.1073/pnas.211536998.

Supporting Figure 7

Fig. 7.
Nuclear Overhauser effect (NOE)-restrained dynamics results for DP-TT2, by using NOEs between protons on nonadjacent residues. A total of 500 random structures were annealed using the program dyana (ref. 1) by using NOE restraints derived from NOE spectroscopy and rotating frame Overhauser spectroscopy data. A side view of the overlay of the best 10 structures is shown (backbone only). A ribbon is also drawn over the backbones to highlight the right-handed twist of the hairpin. The backbone rms deviation among the 10 best structures for DP-TT2 is 2.54 ± 0.82 Å; if only the core residues Arg-5 through Gln-16 of DP-TT2 are considered, the rms deviation among the 10 best structures is 0.79 ± 0.40 Å.

Reference:

1. Chou, P. Y. & Fasman, G. D. (1973) Biochemistry 13, 211-222.