Protease Activities Triggered by Ralstonia solanacearum Infection in Susceptible and Tolerant Tomato Lines

Supplemental Data

• Table S1. List of all peptide relevant evidence. - List of all peptide relevant evidence.
• Table S2. Processed MS data from the pull down experiment. - A, RAW files from the samples analyzed. B, Detailed processed data. The table indicates: log2 LFQ intensities of detection for every protein and sample analyzed; Peptide counts (all, razor + unique, and unique); Sequence coverage % (all, razor + unique, unique); Molecular weight of the protein; Score values, Spectral counts; Protein and Majority Protein IDs (UniProtKB); Gene ID (ENSP); Gene name; Fasta header; and PFAM domains.
• Table S3. Processed MS data from the in-solution experiment. - A, RAW files from the samples analyzed. B, Detailed processed data. The table indicates: log2 LFQ intensities of detection for every protein and sample analyzed; Peptide counts (all, razor + unique, and unique); Sequence coverage % (all, razor + unique, unique); Molecular weight of the protein; Score values, Spectral counts; Protein and Majority Protein IDs (UniProtKB); Gene ID (ENSP); Gene name; Fasta header; and PFAM domains.
• Table S4. Differentially active proteins between compared conditions as resulted from the statistical analysis - A, Mock: comparison of susceptible vs resistant tomato. B, Infected: comparison of susceptible vs resistant tomato. C, Susceptible (Marmande): comparison of infected vs mock-inoculated. D, Resistant (Hawaii 7996): comparison of infected vs mock- 6 inoculated. In all comparisons proteins with an adjusted p-value < 0.05 are highlighted in grey.
• Supplemental text and figures - Document containing supplemental text and figures