Details for gene set KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE[GSEA]

Dataset | mRNA.symbol.cls#con_versus_treat
Phenotype | symbol.cls#con_versus_treat
Upregulated in class | treat
GeneSet | KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE
Enrichment Score (ES) | -0.2580975
Normalized Enrichment Score (NES) | -0.7279875
Nominal p-value | 0.79417473
FDR q-value | 1.0
FWER p-Value | 0.992
Table: GSEA Results Summary

Fig 1: Enrichment plot: KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT
--- | --- | --- | --- | --- | --- | --- | --- | ---
1 | B3GAT2 | na |  |  | 2507 | 0.137 | 0.0395 | No
2 | HS6ST3 | na |  |  | 4769 | 0.117 | 0.0707 | No
3 | GLCE | na |  |  | 7909 | 0.098 | 0.0758 | No
4 | HS3ST3B1 | na |  |  | 8127 | 0.097 | 0.1304 | No
5 | HS3ST2 | na |  |  | 8808 | 0.094 | 0.1752 | No
6 | B3GAT1 | na |  |  | 9345 | 0.092 | 0.2209 | No
7 | NDST2 | na |  |  | 15627 | 0.068 | 0.1540 | No
8 | XYLT1 | na |  |  | 20064 | 0.053 | 0.1099 | No
9 | NDST1 | na |  |  | 20954 | 0.050 | 0.1248 | No
10 | NDST4 | na |  |  | 26906 | 0.032 | 0.0423 | No
11 | HS3ST5 | na |  |  | 27330 | 0.031 | 0.0534 | No
12 | HS3ST3A1 | na |  |  | 29527 | 0.024 | 0.0300 | No
13 | EXTL1 | na |  |  | 30550 | 0.022 | 0.0254 | No
14 | HS2ST1 | na |  |  | 31219 | 0.019 | 0.0255 | No
15 | EXTL2 | na |  |  | 41382 | -0.006 | -0.1448 | No
16 | EXT2 | na |  |  | 45211 | -0.021 | -0.1976 | No
17 | NDST3 | na |  |  | 48745 | -0.035 | -0.2373 | Yes
18 | HS3ST1 | na |  |  | 48947 | -0.036 | -0.2194 | Yes
19 | HS6ST1 | na |  |  | 50391 | -0.043 | -0.2184 | Yes
20 | HS6ST2 | na |  |  | 50805 | -0.045 | -0.1982 | Yes
21 | B3GALT6 | na |  |  | 52600 | -0.056 | -0.1956 | Yes
22 | EXTL3 | na |  |  | 54540 | -0.069 | -0.1875 | Yes
23 | EXT1 | na |  |  | 56563 | -0.092 | -0.1669 | Yes
24 | B3GAT3 | na |  |  | 56932 | -0.098 | -0.1142 | Yes
25 | B4GALT7 | na |  |  | 57518 | -0.111 | -0.0574 | Yes
26 | XYLT2 | na |  |  | 57822 | -0.122 | 0.0105 | Yes
Table: GSEA details [plain text format]

Fig 2: KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE
Blue-Pink O' Gram in the Space of the Analyzed GeneSet
Fig 3: KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE: Random ES distribution
Gene set null distribution of ES for KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE