Details for gene set KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_CHONDROITIN_SULFATE[GSEA]

Dataset | mRNA.symbol.cls#con_versus_treat
Phenotype | symbol.cls#con_versus_treat
Upregulated in class | treat
GeneSet | KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_CHONDROITIN_SULFATE
Enrichment Score (ES) | -0.37827516
Normalized Enrichment Score (NES) | -0.925122
Nominal p-value | 0.5397149
FDR q-value | 1.0
FWER p-Value | 0.979
Table: GSEA Results Summary

Fig 1: Enrichment plot: KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_CHONDROITIN_SULFATE
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT
--- | --- | --- | --- | --- | --- | --- | --- | ---
1 | B3GAT2 | na |  |  | 2507 | 0.137 | 0.0402 | No
2 | CSGALNACT1 | na |  |  | 2801 | 0.134 | 0.1162 | No
3 | CHST13 | na |  |  | 8761 | 0.094 | 0.0713 | No
4 | B3GAT1 | na |  |  | 9345 | 0.092 | 0.1167 | No
5 | CHST7 | na |  |  | 11362 | 0.083 | 0.1325 | No
6 | UST | na |  |  | 18206 | 0.059 | 0.0508 | No
7 | XYLT1 | na |  |  | 20064 | 0.053 | 0.0512 | No
8 | CHST11 | na |  |  | 21029 | 0.050 | 0.0649 | No
9 | CHSY3 | na |  |  | 24802 | 0.038 | 0.0235 | No
10 | CHST14 | na |  |  | 32089 | 0.016 | -0.0913 | No
11 | CHSY1 | na |  |  | 42252 | -0.010 | -0.2594 | No
12 | CSGALNACT2 | na |  |  | 42986 | -0.013 | -0.2643 | No
13 | CHST3 | na |  |  | 46316 | -0.024 | -0.3066 | No
14 | CHST12 | na |  |  | 49155 | -0.037 | -0.3329 | No
15 | CHST15 | na |  |  | 51808 | -0.051 | -0.3477 | Yes
16 | B3GALT6 | na |  |  | 52600 | -0.056 | -0.3276 | Yes
17 | DSE | na |  |  | 54290 | -0.067 | -0.3159 | Yes
18 | B3GAT3 | na |  |  | 56932 | -0.098 | -0.3016 | Yes
19 | B4GALT7 | na |  |  | 57518 | -0.111 | -0.2441 | Yes
20 | XYLT2 | na |  |  | 57822 | -0.122 | -0.1756 | Yes
21 | CHPF | na |  |  | 58172 | -0.141 | -0.0962 | Yes
22 | CHPF2 | na |  |  | 58372 | -0.166 | 0.0010 | Yes
Table: GSEA details [plain text format]

Fig 2: KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_CHONDROITIN_SULFATE
Blue-Pink O' Gram in the Space of the Analyzed GeneSet
Fig 3: KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_CHONDROITIN_SULFATE: Random ES distribution
Gene set null distribution of ES for KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_CHONDROITIN_SULFATE