PeakID	Chr	Start	End	Strand	Peak Score	Focus Ratio/Region Size	Annotation	Detailed Annotation	Distance to TSS	Nearest PromoterID	Entrez ID	Nearest Unigene	Nearest Refseq	Nearest Ensembl	Gene Name	Gene Alias	Gene Description	Gene Type	CCRFCEM_shLuc_H3K27m3	CCRF-CEM_shLUC_WCE	CCRFCEM_shLuc_H3K27m3_vs_CCRF-CEM_shLUC_WCE	p-value vs Control
chr1-1001	chr1	18028639	18029913	+	23	1274	Intergenic	Intergenic	-52532	NM_030812	81569	Hs.2149	NM_030812	ENSG00000117148	ACTL8	CT57	actin like 8	protein-coding	23.04	4.37	5.272311213	2.46E-08
chr1-1010	chr1	20171271	20172788	+	22.4	1517	Intergenic	AluSx|SINE|Alu	-30258	NM_019062	54546	Hs.124835	NM_019062	ENSG00000178828	RNF186	-	ring finger protein 186	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr1-1014	chr1	22997075	22998336	+	21.8	1261	Intergenic	MIRb|SINE|MIR	18231	NM_000491	713	Hs.8986	NM_000491	ENSG00000173369	C1QB	-	complement C1q B chain	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr1-1020	chr1	24630639	24631639	+	18.6	1000	Intergenic	Intergenic	-14673	NM_198173	57822	Hs.657920	NM_021180	ENSG00000158055	GRHL3	SOM|TFCP2L4|VWS2	grainyhead like transcription factor 3	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr1-1028	chr1	32137938	32143312	+	83.9	5374	"exon (NM_001856, exon 44 of 71)"	"exon (NM_001856, exon 44 of 71)"	29143	NM_001856	1307	Hs.368921	NM_001856	ENSG00000084636	COL16A1	447AA|FP1572	collagen type XVI alpha 1 chain	protein-coding	83.85	13.59	6.169977925	1.73E-29
chr1-1037	chr1	38136000	38137000	+	19.8	1000	Intergenic	AluJb|SINE|Alu	19767	NM_017850	54955	Hs.272673	NM_017850	ENSG00000116922	C1orf109	-	chromosome 1 open reading frame 109	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr1-1038	chr1	38195674	38196949	+	23.7	1275	"intron (NM_001099439, intron 7 of 16)"	L1MB8|LINE|L1	34513	NM_001099439	284656	Hs.129435	NM_173641	ENSG00000183317	EPHA10	-	EPH receptor A10	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr1-1039	chr1	38507016	38508016	+	20.5	1000	Intergenic	Intergenic	4934	NM_002699	5453	Hs.1837	NM_002699	ENSG00000185668	POU3F1	OCT6|OTF6|SCIP	POU class 3 homeobox 1	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr1-1040	chr1	38531142	38532142	+	19.8	1000	Intergenic	Intergenic	-19192	NM_002699	5453	Hs.1837	NM_002699	ENSG00000185668	POU3F1	OCT6|OTF6|SCIP	POU class 3 homeobox 1	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr1-1042	chr1	41936971	41940680	+	61.4	3709	Intergenic	MER34A|LTR|ERV1	11529	NM_001302269	1907	Hs.1407	NM_001956	ENSG00000127129	EDN2	ET-2|ET2|PPET2	endothelin 2	protein-coding	61.45	9.71	6.328527291	8.28E-23
chr1-1043	chr1	43532963	43534533	+	25.6	1570	Intergenic	Intergenic	-79846	NM_001101376	440585	Hs.657614	NM_001101376	ENSG00000186973	FAM183A	-	family with sequence similarity 183 member A	protein-coding	25.6	5.34	4.794007491	2.00E-08
chr1-1046	chr1	46930328	46936540	+	120.3	6212	Intergenic	Intergenic	-18058	NR_121680	101929651	Hs.638707	NR_121680	ENSG00000224863	LINC01398	-	long intergenic non-protein coding RNA 1398	ncRNA	120.34	22.33	5.389162562	1.53E-37
chr1-1054	chr1	53862186	53863459	+	21.8	1273	Intergenic	Intergenic	42871	NR_002314	163742	Hs.99394	NR_002314	ENSG00000236253	SLC25A3P1	-	solute carrier family 25 member 3 pseudogene 1	pseudo	21.76	3.88	5.608247423	2.53E-08
chr1-1055	chr1	60502459	60503459	+	20.5	1000	"intron (NM_152377, intron 6 of 11)"	MLT1A0|LTR|ERVL-MaLR	36483	NM_152377	127795	Hs.47385	NM_152377	ENSG00000162598	C1orf87	CREF	chromosome 1 open reading frame 87	protein-coding	20.48	2.43	8.427983539	2.25E-10
chr1-1062	chr1	91194514	91196572	+	42.9	2058	Intergenic	Intergenic	-12749	NM_020063	343472	Hs.451956	NM_020063	ENSG00000143032	BARHL2	-	BarH like homeobox 2	protein-coding	42.89	9.71	4.417095778	8.16E-12
chr1-1067	chr1	101004234	101006478	+	41	2244	"exon (NM_022049, exon 2 of 2)"	"exon (NM_022049, exon 2 of 2)"	1628	NM_022049	54112	Hs.170053	NM_022049	ENSG00000181656	GPR88	COCPMR|STRG	G protein-coupled receptor 88	protein-coding	40.97	5.82	7.0395189	5.30E-17
chr1-1069	chr1	110454371	110455627	+	25.6	1256	"intron (NM_172211, intron 1 of 8)"	"intron (NM_172211, intron 1 of 8)"	1766	NM_172211	1435	Hs.173894	NM_000757	ENSG00000184371	CSF1	CSF-1|MCSF	colony stimulating factor 1	protein-coding	25.6	5.82	4.39862543	7.99E-08
chr1-1071	chr1	110519925	110520925	+	20.5	1000	Intergenic	Intergenic	-6962	NM_006621	10768	Hs.743973	NM_006621	ENSG00000168710	AHCYL1	DCAL|IRBIT|PPP1R78|PRO0233|XPVKONA	adenosylhomocysteinase like 1	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr1-1078	chr1	112138188	112139188	+	19.8	1000	Intergenic	MIRb|SINE|MIR	12252	NR_034126	100129269	Hs.689728	NR_034126		LINC01160	-	long intergenic non-protein coding RNA 1160	ncRNA	19.84	3.88	5.113402062	7.67E-07
chr1-1080	chr1	112469743	112471070	+	26.2	1327	"intron (NM_004980, intron 2 of 7)"	"intron (NM_004980, intron 2 of 7)"	18127	NR_046619	100873995	Hs.535274	NR_046619	ENSG00000237556	KCND3-AS1	-	KCND3 antisense RNA 1	ncRNA	26.24	4.85	5.410309278	4.26E-09
chr1-1083	chr1	117208718	117212422	+	83.2	3704	promoter-TSS (NM_001542)	promoter-TSS (NM_001542)	-193	NM_001007237	3321	Hs.171057	NM_001542	ENSG00000143061	IGSF3	EWI-3|LCDD|V8	immunoglobulin superfamily member 3	protein-coding	83.21	10.68	7.791198502	2.51E-35
chr1-1099	chr1	145550088	145551619	+	32	1531	"intron (NM_144698, intron 1 of 13)"	"intron (NM_144698, intron 1 of 13)"	1644	NM_144698	148741	Hs.710624	NM_144698	ENSG00000198483	ANKRD35	-	ankyrin repeat domain 35	protein-coding	32	4.85	6.597938144	5.03E-13
chr1-1112	chr1	156649788	156651401	+	27.5	1613	Intergenic	AluSz6|SINE|Alu	-3405	NM_006617	10763	Hs.527971	NM_006617	ENSG00000132688	NES	Nbla00170	nestin	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr1-1114	chr1	157323535	157324798	+	22.4	1263	Intergenic	Intergenic	198144	NM_031281	83416	Hs.415950	NM_031281	ENSG00000143297	FCRL5	BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820	Fc receptor like 5	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr1-1117	chr1	165352680	165353680	+	17.3	1000	Intergenic	Intergenic	-27228	NM_177398	4009	Hs.667312	NM_177398	ENSG00000162761	LMX1A	LMX1|LMX1.1	LIM homeobox transcription factor 1 alpha	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-112	chr1	148853930	148856012	+	50.6	2082	"intron (NR_104217, intron 2 of 17).2"	CpG	-21069	NR_136328	101927429	Hs.568236	NR_136328		LOC101927429	-	lysine methyltransferase 2C pseudogene	pseudo	50.57	5.34	9.470037453	1.30E-24
chr1-1121	chr1	180880751	180882587	+	32.6	1836	promoter-TSS (NM_020950)	promoter-TSS (NM_020950)	-644	NM_020950	57710	Hs.734816	NM_020950	ENSG00000135835	KIAA1614	-	KIAA1614	protein-coding	32.64	3.88	8.412371134	3.92E-15
chr1-1134	chr1	204340951	204342609	+	28.8	1658	Intergenic	L1ME1|LINE|L1	-2933	NR_027022	127841	Hs.213144	NR_027022	ENSG00000280924	LINC00628	-	long intergenic non-protein coding RNA 628	ncRNA	28.8	2.43	11.85185185	1.88E-16
chr1-1138	chr1	205206216	205208777	+	46.1	2561	"intron (NM_001242925, intron 1 of 4)"	"intron (NM_001242925, intron 1 of 4)"	-8128	NM_001297611	9911	Hs.6360	NM_014858	ENSG00000133069	TMCC2	HUCEP11	transmembrane and coiled-coil domain family 2	protein-coding	46.09	5.82	7.919243986	1.58E-20
chr1-1141	chr1	206212801	206215267	+	42.9	2466	Intergenic	AluSp|SINE|Alu	-10249	NM_000707	553	Hs.1372	NM_000707	ENSG00000198049	AVPR1B	AVPR3	arginine vasopressin receptor 1B	protein-coding	42.89	7.77	5.51994852	2.23E-14
chr1-1142	chr1	206223216	206224801	+	30.1	1585	promoter-TSS (NM_000707)	promoter-TSS (NM_000707)	-275	NM_000707	553	Hs.1372	NM_000707	ENSG00000198049	AVPR1B	AVPR3	arginine vasopressin receptor 1B	protein-coding	30.08	4.85	6.202061856	2.13E-11
chr1-1143	chr1	220699545	220703344	+	59.5	3799	promoter-TSS (NM_001286129)	promoter-TSS (NM_001286129)	-81	NM_001286126	4139	Hs.497806	NM_018650	ENSG00000116141	MARK1	MARK|Par-1c|Par1c	microtubule affinity regulating kinase 1	protein-coding	59.53	5.82	10.22852234	3.94E-30
chr1-1149	chr1	231597603	231601815	+	71	4212	Intergenic	MLT1F|LTR|ERVL-MaLR	12562	NR_033826	645339	Hs.382049	NR_033826		SNRPD2P2	-	small nuclear ribonucleoprotein D2 pseudogene 2	pseudo	71.05	12.13	5.857378401	3.82E-24
chr1-1155	chr1	1368810	1369810	+	17.9	1000	"intron (NR_125994, intron 1 of 1)"	"intron (NR_125994, intron 1 of 1)"	643	NR_125994	102724312		NR_125994		LINC01770	-	long intergenic non-protein coding RNA 1770	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr1-1158	chr1	2002684	2004906	+	39	2222	"intron (NM_002744, intron 4 of 17)"	MER74A|LTR|ERVL	-1291	NM_001033581	5590	Hs.496255	NM_002744	ENSG00000067606	PRKCZ	PKC-ZETA|PKC2	protein kinase C zeta	protein-coding	39.04	7.77	5.024453024	3.34E-12
chr1-116	chr1	231594428	231595998	+	36.5	1570	Intergenic	L1MA6|LINE|L1	17058	NR_033826	645339	Hs.382049	NR_033826		SNRPD2P2	-	small nuclear ribonucleoprotein D2 pseudogene 2	pseudo	36.48	6.8	5.364705882	3.95E-12
chr1-1168	chr1	2998354	2999354	+	19.8	1000	"intron (NM_199454, intron 1 of 16)"	"intron (NM_199454, intron 1 of 16)"	13112	NM_199454	63976	Hs.99500	NM_022114	ENSG00000142611	PRDM16	CMD1LL|KMT8F|LVNC8|MEL1|PFM13	PR/SET domain 16	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr1-1169	chr1	3001146	3002397	+	21.8	1251	"intron (NM_199454, intron 1 of 16)"	"intron (NM_199454, intron 1 of 16)"	16029	NM_199454	63976	Hs.99500	NM_022114	ENSG00000142611	PRDM16	CMD1LL|KMT8F|LVNC8|MEL1|PFM13	PR/SET domain 16	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr1-1170	chr1	3012740	3021105	+	137.6	8365	"intron (NM_199454, intron 1 of 16)"	"intron (NM_199454, intron 1 of 16)"	-27617	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	137.62	17.96	7.662583519	4.08E-56
chr1-1174	chr1	6301696	6302696	+	19.2	1000	Intergenic	CpG	-2056	NM_001024598	390992	Hs.532677	NM_001024598	ENSG00000173673	HES3	bHLHb43	hes family bHLH transcription factor 3	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr1-1176	chr1	7221400	7222651	+	23.7	1251	"intron (NM_015215, intron 4 of 22)"	L2a|LINE|L2	376641	NR_038934	23261	Hs.397705	NM_015215	ENSG00000171735	CAMTA1	CANPMR	calmodulin binding transcription activator 1	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr1-1177	chr1	7593204	7594467	+	22.4	1263	"intron (NM_015215, intron 6 of 22)"	AluSz|SINE|Alu	-237494	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr1-1180	chr1	8355287	8356287	+	18.6	1000	Intergenic	AluSq|SINE|Alu	-22358	NM_001080397	50651	Hs.463036	NM_001080397	ENSG00000162426	SLC45A1	DNB5	solute carrier family 45 member 1	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr1-1189	chr1	11400509	11401509	+	17.3	1000	Intergenic	AluSx|SINE|Alu	67754	NM_001330350	29914	Hs.522933	NM_013319	ENSG00000120942	UBIAD1	SCCD|TERE1	UbiA prenyltransferase domain containing 1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr1-1190	chr1	11645991	11647771	+	27.5	1780	Intergenic	Intergenic	-22707	NR_104624	101929181	Hs.568616	NR_104624	ENSG00000235643	LINC01647	-	long intergenic non-protein coding RNA 1647	ncRNA	27.52	4.85	5.674226804	7.61E-10
chr1-1203	chr1	17657586	17658934	+	23	1348	"intron (NM_012387, intron 2 of 15)"	AluSx1|SINE|Alu	23570	NM_012387	23569	Hs.522969	NM_012387	ENSG00000159339	PADI4	PAD|PAD4|PADI5|PDI4|PDI5	peptidyl arginine deiminase 4	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr1-1205	chr1	18059701	18062215	+	46.1	2514	Intergenic	AluSx|SINE|Alu	-20850	NM_030812	81569	Hs.2149	NM_030812	ENSG00000117148	ACTL8	CT57	actin like 8	protein-coding	46.09	7.28	6.331043956	1.62E-17
chr1-1207	chr1	19379985	19380985	+	17.3	1000	Intergenic	Intergenic	-97659	NM_001136265	126917	Hs.466625	NM_001136265	ENSG00000169991	IFFO2	-	intermediate filament family orphan 2	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-121	chr1	23543003	23544849	+	52.5	1846	Intergenic	CpG	-22704	NM_000864	3352	Hs.121482	NM_000864	ENSG00000179546	HTR1D	5-HT1D|HT1DA|HTR1DA|HTRL|RDC4	5-hydroxytryptamine receptor 1D	protein-coding	52.49	7.77	6.755469755	1.02E-20
chr1-1210	chr1	20698368	20699995	+	26.9	1627	"intron (NR_033887, intron 10 of 11)"	"intron (NR_033887, intron 10 of 11)"	56106	NR_033887	339505	Hs.633269	NR_033887		LINC01141	-	long intergenic non-protein coding RNA 1141	ncRNA	26.88	4.85	5.542268041	7.61E-10
chr1-1212	chr1	20812585	20817037	+	74.2	4452	Intergenic	Intergenic	-2083	NM_018584	55450	Hs.731383	NM_018584	ENSG00000162545	CAMK2N1	PRO1489	calcium/calmodulin dependent protein kinase II inhibitor 1	protein-coding	74.25	11.65	6.373390558	2.36E-27
chr1-1216	chr1	22247798	22249361	+	27.5	1563	"intron (NM_001291860, intron 1 of 96)"	"intron (NM_001291860, intron 1 of 96)"	15211	NM_001291860	3339	Hs.562227	NM_005529	ENSG00000142798	HSPG2	HSPG|PLC|PRCAN|SJA|SJS|SJS1	heparan sulfate proteoglycan 2	protein-coding	27.52	0.49	56.16326531	1.92E-29
chr1-1224	chr1	23599827	23601483	+	30.7	1656	Intergenic	AluJr4|SINE|Alu	11356	NR_110616	100996511	Hs.99836	NR_110616		LINC01355	-	long intergenic non-protein coding RNA 1355	ncRNA	30.72	5.82	5.278350515	1.29E-10
chr1-1228	chr1	24615158	24616840	+	32	1682	Intergenic	AluJr|SINE|Alu	-29813	NM_198173	57822	Hs.657920	NM_021180	ENSG00000158055	GRHL3	SOM|TFCP2L4|VWS2	grainyhead like transcription factor 3	protein-coding	32	4.85	6.597938144	5.03E-13
chr1-1232	chr1	25938158	25941669	+	60.2	3511	Intergenic	L2a|LINE|L2	-4046	NM_001289010	57134	Hs.197043	NM_020379	ENSG00000117643	MAN1C1	HMIC|MAN1A3|MAN1C|pp6318	mannosidase alpha class 1C member 1	protein-coding	60.17	12.13	4.960428689	2.97E-18
chr1-1233	chr1	25943547	25949588	+	115.2	6041	"intron (NM_020379, intron 1 of 11)"	"intron (NM_020379, intron 1 of 11)"	2608	NM_020379	57134	Hs.197043	NM_020379	ENSG00000117643	MAN1C1	HMIC|MAN1A3|MAN1C|pp6318	mannosidase alpha class 1C member 1	protein-coding	115.21	17.47	6.594733829	1.35E-42
chr1-1237	chr1	26371809	26376157	+	59.5	4348	Intergenic	MER5A|DNA|hAT-Charlie	-1354	NM_032513	7780	Hs.143545	NM_032513	ENSG00000158014	SLC30A2	PP12488|TNZD|ZNT2|ZnT-2	solute carrier family 30 member 2	protein-coding	59.53	9.22	6.456616052	4.48E-22
chr1-1238	chr1	26426526	26429135	+	35.8	2609	Intergenic	AluSc|SINE|Alu	-9826	NM_001243532	149420	Hs.468801	NM_152835	ENSG00000175087	PDIK1L	CLIK1L|STK35L2	PDLIM1 interacting kinase 1 like	protein-coding	35.84	6.8	5.270588235	3.95E-12
chr1-1244	chr1	30524295	30525295	+	17.9	1000	Intergenic	Intergenic	-14336	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr1-1245	chr1	30535067	30536067	+	19.8	1000	Intergenic	LTR36|LTR|ERV1	-25108	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	19.84	4.85	4.090721649	1.08E-05
chr1-1253	chr1	33365708	33367560	+	31.4	1852	"intron (NM_001329723, intron 1 of 4)"	"intron (NM_001329723, intron 1 of 4)"	407	NM_001329724	113452	Hs.534521	NM_033504	ENSG00000121900	TMEM54	BCLP|CAC-1|CAC1	transmembrane protein 54	protein-coding	31.36	4.37	7.176201373	3.82E-13
chr1-1256	chr1	34871379	34872635	+	20.5	1256	Intergenic	Intergenic	229454	NM_001134734	84970	Hs.194610	NM_032884	ENSG00000142698	C1orf94	-	chromosome 1 open reading frame 94	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr1-1257	chr1	35162393	35163758	+	24.3	1365	Intergenic	AluJr|SINE|Alu	-27780	NR_030278	693137		NR_030278	ENSG00000207941	MIR552	MIRN552|hsa-mir-552	microRNA 552	ncRNA	24.32	3.88	6.268041237	6.68E-10
chr1-1259	chr1	37083356	37084626	+	23	1270	Intergenic	L2c|LINE|L2	-135076	NM_156039	1441	Hs.524517	NM_000760	ENSG00000119535	CSF3R	CD114|GCSFR|SCN7	colony stimulating factor 3 receptor	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr1-1260	chr1	37180480	37182346	+	32.6	1866	Intergenic	Intergenic	-232498	NM_156039	1441	Hs.524517	NM_000760	ENSG00000119535	CSF3R	CD114|GCSFR|SCN7	colony stimulating factor 3 receptor	protein-coding	32.64	2.91	11.21649485	6.10E-18
chr1-1261	chr1	37371507	37372770	+	21.1	1263	"intron (NM_000831, intron 1 of 15)"	"intron (NM_000831, intron 1 of 15)"	127706	NM_000831	2899	Hs.128848	NM_000831	ENSG00000163873	GRIK3	EAA5|GLR7|GLUR7|GluK3|GluR7a	glutamate ionotropic receptor kainate type subunit 3	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr1-1266	chr1	38659062	38660321	+	23	1259	Intergenic	L2a|LINE|L2	20748	NR_038928	339442	Hs.434245	NR_038928	ENSG00000237290	LINC01343	-	long intergenic non-protein coding RNA 1343	ncRNA	23.04	3.4	6.776470588	5.45E-10
chr1-1272	chr1	44870614	44875542	+	80.7	4928	"intron (NM_018150, intron 1 of 14)"	CpG	2246	NM_001319956	55182	Hs.456557	NM_018150	ENSG00000187147	RNF220	C1orf164	ring finger protein 220	protein-coding	80.65	13.59	5.93451067	6.41E-28
chr1-1276	chr1	45068263	45070297	+	36.5	2034	"intron (NM_001319957, intron 1 of 13)"	"intron (NM_001319957, intron 1 of 13)"	58115	NR_049849	100847089		NR_049849	ENSG00000263381	MIR5584	-	microRNA 5584	ncRNA	36.48	8.74	4.173913043	1.05E-09
chr1-1277	chr1	45076873	45078349	+	23	1476	"intron (NM_001319957, intron 1 of 13)"	MIR3|SINE|MIR	62669	NM_024587	79639	Hs.22157	NM_024587	ENSG00000126106	TMEM53	NET4	transmembrane protein 53	protein-coding	23.04	3.4	6.776470588	5.45E-10
chr1-1280	chr1	46956108	46963789	+	154.3	7681	Intergenic	Intergenic	-12720	NM_147192	127343	Hs.375623	NM_147192	ENSG00000197587	DMBX1	MBX|OTX3|PAXB	diencephalon/mesencephalon homeobox 1	protein-coding	154.26	23.3	6.620600858	3.54E-56
chr1-1282	chr1	52464598	52465851	+	20.5	1253	Intergenic	AluSx3|SINE|Alu	-8788	NM_002867	5865	Hs.123072	NM_002867	ENSG00000169213	RAB3B	-	"RAB3B, member RAS oncogene family"	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr1-1283	chr1	54083465	54084724	+	20.5	1259	"intron (NM_147193, intron 1 of 9)"	"intron (NM_147193, intron 1 of 9)"	115783	NM_147193	148979	Hs.306691	NM_147193	ENSG00000174332	GLIS1	-	GLIS family zinc finger 1	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr1-1285	chr1	56942532	56943833	+	25.6	1301	Intergenic	Intergenic	102075	NM_003713	8613	Hs.405156	NM_003713	ENSG00000162407	PLPP3	Dri42|LPP3|PAP2B|PPAP2B|VCIP	phospholipid phosphatase 3	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr1-1293	chr1	68694662	68695662	+	19.8	1000	"intron (NM_024911, intron 1 of 11)"	"intron (NM_024911, intron 1 of 11)"	3067	NM_001002292	79971	Hs.647659	NM_024911	ENSG00000116729	WLS	C1orf139|EVI|GPR177|MRP|mig-14	wntless Wnt ligand secretion mediator	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr1-1295	chr1	86041862	86042862	+	19.2	1000	"intron (NM_001134445, intron 1 of 6)"	CpG	1684	NM_001134445	23576	Hs.713411	NM_012137	ENSG00000153904	DDAH1	DDAH|DDAH-1|DDAHI|HEL-S-16	dimethylarginine dimethylaminohydrolase 1	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr1-1299	chr1	91316454	91318419	+	32.6	1965	promoter-TSS (NR_135038)	promoter-TSS (NR_135038)	-241	NR_135038	105378853	Hs.546492	NR_135038	ENSG00000233593	LOC105378853	-	uncharacterized LOC105378853	ncRNA	32.64	4.85	6.729896907	5.03E-13
chr1-1301	chr1	110256597	110258853	+	34.6	2256	"intron (NM_000851, intron 6 of 7)"	"intron (NM_000851, intron 6 of 7)"	2861	NM_000851	2949	Hs.75652	NM_000851	ENSG00000134201	GSTM5	GSTM5-5|GTM5	glutathione S-transferase mu 5	protein-coding	34.56	7.77	4.447876448	3.74E-10
chr1-1302	chr1	110280842	110283339	+	38.4	2497	"exon (NM_000849, exon 4 of 9)"	"exon (NM_000849, exon 4 of 9)"	1570	NR_024537	2947	Hs.2006	NM_000849	ENSG00000134202	GSTM3	GST5|GSTB|GSTM3-3|GTM3	glutathione S-transferase mu 3	protein-coding	38.4	6.8	5.647058824	1.26E-13
chr1-1303	chr1	110656662	110658312	+	30.7	1650	TTS (NM_203412)	TTS (NM_203412)	2425	NM_203412	164153	Hs.374027	NM_203412	ENSG00000186150	UBL4B	-	ubiquitin like 4B	protein-coding	30.72	4.85	6.334020619	3.34E-12
chr1-1305	chr1	110672692	110673692	+	18.6	1000	Intergenic	CpG	18130	NM_203412	164153	Hs.374027	NM_203412	ENSG00000186150	UBL4B	-	ubiquitin like 4B	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr1-1307	chr1	110960985	110965317	+	64	4332	Intergenic	Intergenic	-12605	NM_006402	10542	Hs.439815	NM_006402	ENSG00000134248	LAMTOR5	HBXIP|XIP	"late endosomal/lysosomal adaptor, MAPK and MTOR activator 5"	protein-coding	64.01	13.59	4.710080942	2.02E-18
chr1-1314	chr1	113049434	113053210	+	65.3	3776	promoter-TSS (NM_024494)	promoter-TSS (NM_024494)	-48	NM_024494	7482	Hs.258575	NM_004185	ENSG00000134245	WNT2B	WNT13	Wnt family member 2B	protein-coding	65.29	11.65	5.604291845	7.10E-22
chr1-1316	chr1	116518601	116519914	+	18.6	1313	"exon (NM_018420, exon 1 of 12)"	"exon (NM_018420, exon 1 of 12)"	138	NM_018420	55356	Hs.125482	NM_018420	ENSG00000163393	SLC22A15	FLIPT1|PRO34686	solute carrier family 22 member 15	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr1-1319	chr1	117458351	117459603	+	23	1252	"intron (NM_020440, intron 1 of 8)"	"intron (NM_020440, intron 1 of 8)"	6432	NM_020440	5738	Hs.418093	NM_020440	ENSG00000134247	PTGFRN	CD315|CD9P-1|EWI-F|FPRP|SMAP-6	prostaglandin F2 receptor inhibitor	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr1-1331	chr1	153453181	153454181	+	18.6	1000	Intergenic	HAL1|LINE|L1	-20544	NM_002963	6278	Hs.112408	NM_002963	ENSG00000143556	S100A7	PSOR1|S100A7c	S100 calcium binding protein A7	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr1-1334	chr1	154402624	154403892	+	22.4	1268	"intron (NM_181359, intron 3 of 8)"	MIRb|SINE|MIR	25589	NM_181359	3570	Hs.135087	NM_000565	ENSG00000160712	IL6R	CD126|IL-6R-1|IL-6RA|IL6Q|IL6RA|IL6RQ|gp80	interleukin 6 receptor	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr1-1335	chr1	154777340	154778678	+	24.3	1338	"intron (NM_002249, intron 2 of 7)"	"intron (NM_002249, intron 2 of 7)"	54329	NM_170782	3782	Hs.490765	NM_002249	ENSG00000143603	KCNN3	KCa2.3|SK3|SKCA3|hSK3	potassium calcium-activated channel subfamily N member 3	protein-coding	24.32	0.97	25.07216495	2.01E-20
chr1-1348	chr1	157083937	157084937	+	17.9	1000	Intergenic	Intergenic	-13717	NR_001560	360155	Hs.491808	NR_001560	ENSG00000235700	CYCSP52	HC6|HCP2	"cytochrome c, somatic pseudogene 52"	pseudo	17.92	4.37	4.100686499	1.41E-05
chr1-1351	chr1	160114101	160115101	+	19.8	1000	Intergenic	L2a|LINE|L2	-6751	NM_144699	480	Hs.662219	NM_144699	ENSG00000132681	ATP1A4	ATP1A1|ATP1AL2	ATPase Na+/K+ transporting subunit alpha 4	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr1-1354	chr1	161695166	161696166	+	17.9	1000	"exon (NM_001002901, exon 6 of 8)"	"exon (NM_001002901, exon 6 of 8)"	3223	NM_001288829	127943	Hs.517422	NM_001002901	ENSG00000162746	FCRLB	FCRL2|FCRLM2|FCRLY|FREB-2|FREB2|FcRY	Fc receptor like B	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr1-1355	chr1	161989987	161991719	+	30.1	1732	"intron (NM_001347700, intron 1 of 7)"	L2c|LINE|L2	3402	NM_001297713	25903	Hs.507515	NM_015441	ENSG00000162745	OLFML2B	-	olfactomedin like 2B	protein-coding	30.08	5.82	5.16838488	6.85E-10
chr1-1359	chr1	165929180	165930180	+	19.8	1000	Intergenic	LTR84a|LTR|ERVL	52522	NR_037431	100500832		NR_037431	ENSG00000143179	MIR3658	-	microRNA 3658	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr1-1360	chr1	166008409	166009689	+	20.5	1280	Intergenic	MER5A|DNA|hAT-Charlie	114986	NR_030626	100126349		NR_030626	ENSG00000215952	MIR921	MIRN921|hsa-mir-921	microRNA 921	ncRNA	20.48	4.37	4.686498856	6.64E-07
chr1-1367	chr1	201506697	201508417	+	31.4	1720	Intergenic	Intergenic	18525	NR_026667	376693	Hs.605989	NR_026667		RPS10P7	RPS10_2_147	ribosomal protein S10 pseudogene 7	pseudo	31.36	7.28	4.307692308	9.24E-09
chr1-1374	chr1	204288029	204291298	+	53.1	3269	"intron (NM_014935, intron 1 of 22)"	"intron (NM_014935, intron 1 of 22)"	39394	NM_014935	22874	Hs.253146	NM_014935	ENSG00000143850	PLEKHA6	PEPP-3|PEPP3	pleckstrin homology domain containing A6	protein-coding	53.13	9.22	5.762472885	3.88E-18
chr1-1379	chr1	205350497	205352066	+	27.5	1569	"intron (NR_038425, intron 3 of 3)"	AluJb|SINE|Alu	8901	NR_038425	284576	Hs.585440	NR_038425	ENSG00000226235	LEMD1-AS1	-	LEMD1 antisense RNA 1	ncRNA	27.52	2.91	9.457044674	7.03E-14
chr1-1380	chr1	207115015	207116641	+	26.9	1626	"intron (NM_002644, intron 1 of 10)"	"intron (NM_002644, intron 1 of 10)"	3983	NM_002644	5284	Hs.497589	NM_002644	ENSG00000162896	PIGR	-	polymeric immunoglobulin receptor	protein-coding	26.88	4.85	5.542268041	7.61E-10
chr1-1382	chr1	207669130	207670388	+	22.4	1258	"intron (NM_000651, intron 1 of 46)"	CpG	286	NM_000573	1378	Hs.334019	NM_000573	ENSG00000203710	CR1	C3BR|C4BR|CD35|KN	complement C3b/C4b receptor 1 (Knops blood group)	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr1-1383	chr1	224038573	224039824	+	21.1	1251	Intergenic	MER58B|DNA|hAT-Charlie	-5524	NM_005426	7159	Hs.523968	NM_005426	ENSG00000143514	TP53BP2	53BP2|ASPP2|BBP|P53BP2|PPP1R13A	tumor protein p53 binding protein 2	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr1-1384	chr1	224724249	224725499	+	21.1	1250	"intron (NM_001322304, intron 2 of 6)"	MER4A|LTR|ERV1	-79305	NM_001322305	149111	Hs.731723	NM_152495	ENSG00000143786	CNIH3	CNIH-3	cornichon family AMPA receptor auxiliary protein 3	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr1-1385	chr1	226735628	226738457	+	57	2829	"intron (NM_001003665, intron 1 of 3)"	CpG	541	NM_001003665	375057	Hs.116827	NM_001003665	ENSG00000203685	STUM	C1orf95	"stum, mechanosensory transduction mediator homolog"	protein-coding	56.97	7.28	7.825549451	2.40E-24
chr1-1387	chr1	227505764	227507310	+	26.2	1546	promoter-TSS (NM_003607)	promoter-TSS (NM_003607)	-711	NM_003607	8476	Hs.35433	NM_003607	ENSG00000143776	CDC42BPA	MRCK|MRCKA|PK428	CDC42 binding protein kinase alpha	protein-coding	26.24	4.37	6.004576659	7.40E-10
chr1-1392	chr1	234758118	234759118	+	18.6	1000	Intergenic	AluSx1|SINE|Alu	-6439	NR_033927	100302691	Hs.209162	NR_033927	ENSG00000224939	LINC00184	HANC|NCRNA00184	long intergenic non-protein coding RNA 184	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr1-1394	chr1	245316997	245319714	+	54.4	2717	promoter-TSS (NM_018012)	promoter-TSS (NM_018012)	68	NM_018012	55083	Hs.143134	NM_018012	ENSG00000162849	KIF26B	-	kinesin family member 26B	protein-coding	54.41	6.8	8.001470588	1.13E-23
chr1-1402	chr1	1962892	1965118	+	35.8	2226	Intergenic	Intergenic	13237	NM_000815	2563	Hs.113882	NM_000815	ENSG00000187730	GABRD	EIG10|EJM7|GEFSP5	gamma-aminobutyric acid type A receptor delta subunit	protein-coding	35.84	0.97	36.94845361	6.64E-34
chr1-1407	chr1	2798941	2800496	+	25	1555	Intergenic	Intergenic	-93488	NM_001242672	100287898	Hs.632363	NM_001242672	ENSG00000215912	TTC34	-	tetratricopeptide repeat domain 34	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr1-1413	chr1	3071306	3074187	+	48.6	2881	"intron (NM_199454, intron 1 of 16)"	"intron (NM_199454, intron 1 of 16)"	28207	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	48.65	8.74	5.566361556	1.25E-16
chr1-1417	chr1	3207404	3208404	+	19.2	1000	"intron (NM_199454, intron 3 of 16)"	"intron (NM_199454, intron 3 of 16)"	-163243	NM_014448	27237	Hs.87435	NM_014448	ENSG00000130762	ARHGEF16	GEF16|NBR	Rho guanine nucleotide exchange factor 16	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr1-1418	chr1	3227952	3229219	+	20.5	1267	"intron (NM_199454, intron 3 of 16)"	"intron (NM_199454, intron 3 of 16)"	-142562	NM_014448	27237	Hs.87435	NM_014448	ENSG00000130762	ARHGEF16	GEF16|NBR	Rho guanine nucleotide exchange factor 16	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr1-1424	chr1	7078210	7079999	+	32	1789	"intron (NM_015215, intron 3 of 22)"	"intron (NM_015215, intron 3 of 22)"	233720	NR_038934	23261	Hs.397705	NM_015215	ENSG00000171735	CAMTA1	CANPMR	calmodulin binding transcription activator 1	protein-coding	32	5.82	5.498281787	2.32E-11
chr1-1431	chr1	7981592	7983898	+	35.8	2306	"intron (NM_001561, intron 8 of 8)"	AluSx|SINE|Alu	20480	NM_001561	3604	Hs.86447	NM_001561	ENSG00000049249	TNFRSF9	4-1BB|CD137|CDw137|ILA	TNF receptor superfamily member 9	protein-coding	35.84	4.85	7.389690722	1.37E-15
chr1-1432	chr1	8203737	8204737	+	17.9	1000	Intergenic	L1MA4|LINE|L1	-64495	NR_125998	102724539	Hs.516816	NR_125998	ENSG00000227634	LINC01714	-	long intergenic non-protein coding RNA 1714	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr1-1436	chr1	10785948	10787335	+	23	1387	"intron (NM_017766, intron 2 of 15)"	"intron (NM_017766, intron 2 of 15)"	70092	NM_001079843	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr1-1441	chr1	11749921	11752823	+	45.4	2902	promoter-TSS (NM_198545)	promoter-TSS (NM_198545)	306	NM_001127325	10459	Hs.19400	NM_006341	ENSG00000116670	MAD2L2	FANCV|MAD2B|POLZ2|REV7	MAD2 mitotic arrest deficient-like 2 (yeast)	protein-coding	45.45	7.28	6.243131868	1.03E-16
chr1-1446	chr1	15179429	15180701	+	21.1	1272	"intron (NM_201628, intron 1 of 14)"	"intron (NM_201628, intron 1 of 14)"	-70560	NM_001018000	23254	Hs.368823	NM_015209	ENSG00000189337	KAZN	KAZ	"kazrin, periplakin interacting protein"	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr1-1472	chr1	21026712	21027712	+	19.2	1000	"intron (NM_020816, intron 5 of 14)"	MER74B|LTR|ERVL	17298	NM_020816	57576	Hs.130411	NM_020816	ENSG00000117245	KIF17	KIF17B|KIF3X|KLP-2|OSM-3	kinesin family member 17	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr1-1473	chr1	22215115	22216607	+	21.1	1492	"intron (NM_001291860, intron 6 of 96)"	MIR|SINE|MIR	47929	NM_001291860	3339	Hs.562227	NM_005529	ENSG00000142798	HSPG2	HSPG|PLC|PRCAN|SJA|SJS|SJS1	heparan sulfate proteoglycan 2	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr1-1475	chr1	22562623	22566551	+	55	3928	Intergenic	Intergenic	-28145	NR_039613	100616433		NR_039613	ENSG00000266564	MIR4418	-	microRNA 4418	ncRNA	55.05	10.68	5.154494382	2.00E-17
chr1-1478	chr1	22920982	22921982	+	18.6	1000	"intron (NM_020526, intron 7 of 16)"	"intron (NM_020526, intron 7 of 16)"	31487	NM_001006943	2046	Hs.283613	NM_020526	ENSG00000070886	EPHA8	EEK|EK3|HEK3	EPH receptor A8	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr1-1488	chr1	24488058	24489314	+	21.1	1256	"intron (NM_170743, intron 3 of 6)"	MLT1E2|LTR|ERVL-MaLR	-18911	NM_021258	58985	Hs.110915	NM_021258	ENSG00000142677	IL22RA1	CRF2-9|IL22R|IL22R1	interleukin 22 receptor subunit alpha 1	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr1-1490	chr1	24633526	24636683	+	46.1	3157	Intergenic	Intergenic	-10708	NM_198173	57822	Hs.657920	NM_021180	ENSG00000158055	GRHL3	SOM|TFCP2L4|VWS2	grainyhead like transcription factor 3	protein-coding	46.09	7.77	5.931788932	1.14E-16
chr1-1492	chr1	24659061	24660662	+	26.9	1601	"intron (NM_198174, intron 2 of 15)"	"intron (NM_198174, intron 2 of 15)"	10331	NM_021180	57822	Hs.657920	NM_021180	ENSG00000158055	GRHL3	SOM|TFCP2L4|VWS2	grainyhead like transcription factor 3	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr1-150	chr1	92350527	92354383	+	79.4	3856	promoter-TSS (NM_001195683)	promoter-TSS (NM_001195683)	-619	NR_036634	7049	Hs.482390	NM_003243	ENSG00000069702	TGFBR3	BGCAN|betaglycan	transforming growth factor beta receptor 3	protein-coding	79.37	13.59	5.840323767	3.82E-27
chr1-1502	chr1	30684623	30688311	+	48	3688	Intergenic	L4|LINE|RTE	-176008	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	48.01	5.82	8.249140893	1.93E-21
chr1-1507	chr1	31258255	31259587	+	21.8	1332	Intergenic	AluSz|SINE|Alu	-28238	NM_006762	7805	Hs.371021	NM_006762	ENSG00000162511	LAPTM5	CLAST6	lysosomal protein transmembrane 5	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr1-151	chr1	117451910	117453426	+	35.8	1516	"5' UTR (NM_020440, exon 1 of 9)"	"5' UTR (NM_020440, exon 1 of 9)"	123	NM_020440	5738	Hs.418093	NM_020440	ENSG00000134247	PTGFRN	CD315|CD9P-1|EWI-F|FPRP|SMAP-6	prostaglandin F2 receptor inhibitor	protein-coding	35.84	5.82	6.158075601	1.09E-13
chr1-1512	chr1	36948696	36949696	+	17.9	1000	promoter-TSS (NM_156039)	promoter-TSS (NM_156039)	-281	NM_156039	1441	Hs.524517	NM_000760	ENSG00000119535	CSF3R	CD114|GCSFR|SCN7	colony stimulating factor 3 receptor	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr1-1515	chr1	37817071	37818402	+	22.4	1331	Intergenic	MLT2E|LTR|ERVL	122308	NR_038842	728431	Hs.380738	NR_038842	ENSG00000233621	LINC01137	-	long intergenic non-protein coding RNA 1137	ncRNA	22.4	5.34	4.194756554	1.97E-06
chr1-1516	chr1	38711259	38712732	+	21.1	1473	Intergenic	Intergenic	-31556	NR_038928	339442	Hs.434245	NR_038928	ENSG00000237290	LINC01343	-	long intergenic non-protein coding RNA 1343	ncRNA	21.12	0.49	43.10204082	5.97E-21
chr1-1519	chr1	41846029	41848309	+	39	2280	"intron (NM_001291281, intron 1 of 2)"	C-rich|Low_complexity|Low_complexity	-5828	NR_135817	101929901		NR_135817	ENSG00000229901	LOC101929901	-	uncharacterized LOC101929901	ncRNA	39.04	0.97	40.24742268	4.39E-37
chr1-1522	chr1	44851774	44853030	+	23.7	1256	Intergenic	Intergenic	-18430	NM_018150	55182	Hs.456557	NM_018150	ENSG00000187147	RNF220	C1orf164	ring finger protein 220	protein-coding	23.68	5.82	4.068728522	1.51E-06
chr1-1527	chr1	45093238	45094238	+	18.6	1000	"intron (NM_001319956, intron 5 of 14)"	"intron (NM_001319956, intron 5 of 14)"	46542	NM_024587	79639	Hs.22157	NM_024587	ENSG00000126106	TMEM53	NET4	transmembrane protein 53	protein-coding	18.56	0.49	37.87755102	9.96E-18
chr1-1530	chr1	47395900	47397433	+	25.6	1533	"intron (NR_134994, intron 10 of 10)"	"intron (NR_134994, intron 10 of 10)"	10490	NR_134992	1579	Hs.1645	NM_000778	ENSG00000187048	CYP4A11	CP4Y|CYP4A2|CYP4AII	cytochrome P450 family 4 subfamily A member 11	protein-coding	25.6	1.94	13.19587629	4.03E-16
chr1-1531	chr1	54017404	54018755	+	21.1	1351	"intron (NM_147193, intron 3 of 9)"	"intron (NM_147193, intron 3 of 9)"	93007	NM_033067	63948	Hs.131654	NM_033067	ENSG00000143006	DMRTB1	-	DMRT like family B with proline rich C-terminal 1	protein-coding	21.12	1.46	14.46575342	1.29E-13
chr1-1532	chr1	54115640	54116640	+	18.6	1000	"intron (NM_147193, intron 1 of 9)"	AluSx|SINE|Alu	83737	NM_147193	148979	Hs.306691	NM_147193	ENSG00000174332	GLIS1	-	GLIS family zinc finger 1	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr1-1535	chr1	57888062	57889928	+	36.5	1866	"intron (NM_021080, intron 3 of 16)"	CpG	-437220	NR_104363	101926890	Hs.662207	NR_104362	ENSG00000226759	DAB1-AS1	-	DAB1 antisense RNA 1	ncRNA	36.48	1.94	18.80412371	8.81E-26
chr1-1538	chr1	64263085	64264354	+	22.4	1269	"intron (NM_001083592, intron 1 of 6)"	"intron (NM_001083592, intron 1 of 6)"	24029	NM_001083592	4919	Hs.128753	NM_005012	ENSG00000185483	ROR1	NTRKR1|dJ537F10.1	receptor tyrosine kinase like orphan receptor 1	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr1-1542	chr1	68296637	68300120	+	75.5	3483	"intron (NR_040077, intron 1 of 9)"	CpG	407	NR_040077	100289178	Hs.677603	NR_040077	ENSG00000232284	GNG12-AS1	-	GNG12 antisense RNA 1	ncRNA	75.53	4.85	15.57319588	2.45E-48
chr1-1544	chr1	68618330	68619611	+	21.1	1281	"intron (NM_024911, intron 5 of 11)"	"intron (NM_024911, intron 5 of 11)"	30323	NR_031664	100302279		NR_031664	ENSG00000221203	MIR1262	MIRN1262|hsa-mir-1262|mir-1262	microRNA 1262	ncRNA	21.12	4.85	4.354639175	2.52E-06
chr1-1555	chr1	95582227	95586675	+	76.8	4448	"intron (NM_001199691, intron 1 of 7)"	"intron (NM_001199691, intron 1 of 7)"	972	NM_001199691	100527978	Hs.483512	NM_001199691	ENSG00000271092	TMEM56-RWDD3	-	TMEM56-RWDD3 readthrough	protein-coding	76.81	18.44	4.165401302	2.85E-19
chr1-1565	chr1	112865801	112866801	+	17.3	1000	Intergenic	MIRb|SINE|MIR	-72499	NM_018704	55917	Hs.744100	NM_018704	ENSG00000143079	CTTNBP2NL	-	CTTNBP2 N-terminal like	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-1571	chr1	117444659	117445659	+	17.9	1000	Intergenic	Intergenic	-7386	NM_020440	5738	Hs.418093	NM_020440	ENSG00000134247	PTGFRN	CD315|CD9P-1|EWI-F|FPRP|SMAP-6	prostaglandin F2 receptor inhibitor	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr1-1592	chr1	152645879	152646879	+	19.2	1000	Intergenic	Intergenic	-1412	NM_178429	353140	Hs.553713	NM_178429	ENSG00000187180	LCE2C	LEP11	late cornified envelope 2C	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr1-1594	chr1	153233172	153237385	+	85.8	4213	TTS (NM_000427)	TTS (NM_000427)	3099	NM_000427	4014	Hs.251680	NM_000427	ENSG00000203782	LOR	-	loricrin	protein-coding	85.77	13.11	6.542334096	5.56E-32
chr1-1600	chr1	154785947	154789711	+	51.8	3764	"intron (NM_002249, intron 2 of 7)"	"intron (NM_002249, intron 2 of 7)"	44509	NM_170782	3782	Hs.490765	NM_002249	ENSG00000143603	KCNN3	KCa2.3|SK3|SKCA3|hSK3	potassium calcium-activated channel subfamily N member 3	protein-coding	51.85	10.68	4.854868914	2.59E-15
chr1-1606	chr1	156419576	156420576	+	18.6	1000	Intergenic	L1ME4a|LINE|L1	-20736	NM_001320453	10485	Hs.380027	NM_006365	ENSG00000125462	C1orf61	CROC4	chromosome 1 open reading frame 61	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr1-1610	chr1	156828748	156832765	+	71	4017	promoter-TSS (NM_002529)	promoter-TSS (NM_002529)	85	NM_002529	4914	Hs.406293	NM_002529	ENSG00000198400	NTRK1	MTC|TRK|TRK1|TRKA|Trk-A|p140-TrkA	neurotrophic receptor tyrosine kinase 1	protein-coding	71.05	11.65	6.098712446	5.86E-25
chr1-1619	chr1	164529262	164530262	+	18.6	1000	"intron (NM_001204963, intron 1 of 8)"	"intron (NM_001204963, intron 1 of 8)"	1165	NM_002585	5087	Hs.557097	NM_002585	ENSG00000185630	PBX1	-	PBX homeobox 1	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr1-1621	chr1	168104160	168107621	+	64.6	3461	promoter-TSS (NM_153832)	promoter-TSS (NM_153832)	55	NM_001267613	23432	Hs.271809	NM_007369	ENSG00000143147	GPR161	RE2	G protein-coupled receptor 161	protein-coding	64.65	12.13	5.329760923	2.12E-20
chr1-1624	chr1	181182994	181183994	+	18.6	1000	Intergenic	AluSx|SINE|Alu	-22030	NR_046249	100287948	Hs.742594	NR_046249	ENSG00000179452	LINC01699	GM140	long intergenic non-protein coding RNA 1699	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr1-1625	chr1	181756883	181757883	+	19.2	1000	"intron (NM_001205294, intron 42 of 45)"	L2b|LINE|L2	273464	NM_001009992	127665	Hs.684328	NM_001009992	ENSG00000179930	ZNF648	-	zinc finger protein 648	protein-coding	19.2	2.43	7.901234568	1.91E-09
chr1-1626	chr1	182602955	182607066	+	55	4111	Intergenic	Intergenic	20735	NR_036490	284648	Hs.253475	NR_036490	ENSG00000261504	LINC01686	-	long intergenic non-protein coding RNA 1686	ncRNA	55.05	11.65	4.725321888	4.03E-16
chr1-1628	chr1	182643092	182644092	+	18.6	1000	Intergenic	Intergenic	-1525	NM_001102450	85397	Hs.20982	NM_033345	ENSG00000135824	RGS8	-	regulator of G-protein signaling 8	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr1-1633	chr1	185526834	185527834	+	17.9	1000	TTS (NR_110793)	TTS (NR_110793)	70286	NR_110793	101929093	Hs.535227	NR_110793	ENSG00000228309	LINC01350	GS1-204I12.1	long intergenic non-protein coding RNA 1350	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr1-1637	chr1	200004559	200011258	+	113.3	6699	"intron (NM_003822, intron 1 of 6)"	"intron (NM_003822, intron 1 of 6)"	-4045	NM_001276464	2494	Hs.33446	NM_003822	ENSG00000116833	NR5A2	B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2	nuclear receptor subfamily 5 group A member 2	protein-coding	113.29	17.96	6.307906459	4.48E-40
chr1-1639	chr1	200164936	200165936	+	19.2	1000	Intergenic	AluSx1|SINE|Alu	153483	NM_001276464	2494	Hs.33446	NM_003822	ENSG00000116833	NR5A2	B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2	nuclear receptor subfamily 5 group A member 2	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr1-1640	chr1	201016367	201017635	+	22.4	1268	"intron (NM_000069, intron 36 of 43)"	"intron (NM_000069, intron 36 of 43)"	-24173	NM_001252102	23046	Hs.169182	NM_017596	ENSG00000116852	KIF21B	-	kinesin family member 21B	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr1-1648	chr1	201543590	201544590	+	18.6	1000	Intergenic	Intergenic	55058	NR_026667	376693	Hs.605989	NR_026667		RPS10P7	RPS10_2_147	ribosomal protein S10 pseudogene 7	pseudo	18.56	0	19.11898173	9.96E-18
chr1-1652	chr1	202639968	202640968	+	18.6	1000	"intron (NM_177402, intron 1 of 8)"	"intron (NM_177402, intron 1 of 8)"	-27887	NM_001136504	127833	Hs.25422	NM_177402	ENSG00000143858	SYT2	CMS7|MYSPC|SytII	synaptotagmin 2	protein-coding	18.56	0	19.11898173	9.96E-18
chr1-1653	chr1	203035709	203036709	+	18.6	1000	"intron (NM_001304331, intron 25 of 29)"	L2a|LINE|L2	18957	NM_002479	4656	Hs.2830	NM_002479	ENSG00000122180	MYOG	MYF4|bHLHc3|myf-4	myogenin	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr1-1655	chr1	203043975	203046817	+	44.2	2842	"intron (NM_001304331, intron 29 of 29)"	"intron (NM_001304331, intron 29 of 29)"	9770	NM_002479	4656	Hs.2830	NM_002479	ENSG00000122180	MYOG	MYF4|bHLHc3|myf-4	myogenin	protein-coding	44.17	3.88	11.38402062	4.33E-24
chr1-1656	chr1	203170692	203173053	+	37.1	2361	Intergenic	Intergenic	-15950	NM_001276	1116	Hs.382202	NM_001276	ENSG00000133048	CHI3L1	ASRT7|CGP-39|GP-39|GP39|HC-gp39|HCGP-3P|YKL-40|YKL40|YYL-40|hCGP-39	chitinase 3 like 1	protein-coding	37.12	8.74	4.247139588	2.45E-10
chr1-1657	chr1	203320026	203323136	+	43.5	3110	Intergenic	Intergenic	-1024	NR_103757	2331	Hs.519168	NM_002023	ENSG00000122176	FMOD	FM|SLRR2E	fibromodulin	protein-coding	43.53	10.68	4.075842697	2.22E-11
chr1-1658	chr1	203462738	203463738	+	18.6	1000	promoter-TSS (NM_014359)	promoter-TSS (NM_014359)	-33	NM_014359	26254	Hs.632468	NM_014359	ENSG00000188770	OPTC	OPT	opticin	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr1-1660	chr1	204652038	204661660	+	119.7	9622	Intergenic	Intergenic	-2252	NM_201630	10446	Hs.26312	NM_006338	ENSG00000170382	LRRN2	FIGLER7|GAC1|LRANK1|LRRN5	leucine rich repeat neuronal 2	protein-coding	119.7	10.68	11.20786517	1.07E-62
chr1-1665	chr1	204970790	204973152	+	35.8	2362	"intron (NM_001005388, intron 27 of 29)"	"intron (NM_001005388, intron 27 of 29)"	-40094	NM_001346083	6900	Hs.519220	NM_005076	ENSG00000184144	CNTN2	AXT|FAME5|TAG-1|TAX|TAX1	contactin 2	protein-coding	35.84	4.85	7.389690722	1.37E-15
chr1-1667	chr1	205911004	205912004	+	18.6	1000	"intron (NM_134325, intron 1 of 21)"	"intron (NM_134325, intron 1 of 21)"	1084	NM_134325	115019	Hs.164073	NM_052934	ENSG00000174502	SLC26A9	-	solute carrier family 26 member 9	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr1-1669	chr1	206684695	206685957	+	20.5	1262	"intron (NM_182664, intron 1 of 4)"	"intron (NM_182664, intron 1 of 4)"	4463	NM_182663	83593	Hs.497579	NM_031437	ENSG00000266094	RASSF5	Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3	Ras association domain family member 5	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr1-1670	chr1	206951155	206952429	+	21.8	1274	Intergenic	Intergenic	-5953	NM_000572	3586	Hs.193717	NM_000572	ENSG00000136634	IL10	CSIF|GVHDS|IL-10|IL10A|TGIF	interleukin 10	protein-coding	21.76	0	22.41535789	1.33E-22
chr1-1672	chr1	207627315	207628588	+	23.7	1273	"intron (NM_001006658, intron 1 of 19)"	CpG	306	NM_001877	1380	Hs.445757	NM_001877	ENSG00000117322	CR2	C3DR|CD21|CR|CVID7|SLEB9	complement C3d receptor 2	protein-coding	23.68	1.46	16.21917808	5.41E-16
chr1-1674	chr1	208148245	208149245	+	17.9	1000	Intergenic	AluJo|SINE|Alu	-64062	NM_001773	947	Hs.374990	NM_001773	ENSG00000174059	CD34	-	CD34 molecule	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr1-1676	chr1	208260686	208261686	+	18.6	1000	"intron (NM_025179, intron 9 of 31)"	"intron (NM_025179, intron 9 of 31)"	156479	NM_025179	5362	Hs.497626	NM_025179	ENSG00000076356	PLXNA2	OCT|PLXN2	plexin A2	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr1-1678	chr1	208408138	208409568	+	28.8	1430	"intron (NM_025179, intron 1 of 31)"	MIR|SINE|MIR	8812	NM_025179	5362	Hs.497626	NM_025179	ENSG00000076356	PLXNA2	OCT|PLXN2	plexin A2	protein-coding	28.8	1.94	14.84536082	1.99E-18
chr1-1679	chr1	208415425	208417535	+	40.3	2110	"intron (NM_025179, intron 1 of 31)"	"intron (NM_025179, intron 1 of 31)"	1185	NM_025179	5362	Hs.497626	NM_025179	ENSG00000076356	PLXNA2	OCT|PLXN2	plexin A2	protein-coding	40.33	5.82	6.929553265	3.74E-16
chr1-1684	chr1	210426598	210428022	+	25	1424	Intergenic	Intergenic	-19844	NR_024337	574036	Hs.446946	NR_024337	ENSG00000203706	SERTAD4-AS1	C1orf133	SERTAD4 antisense RNA 1	ncRNA	24.96	3.88	6.432989691	6.68E-10
chr1-1685	chr1	211676464	211677464	+	19.2	1000	Intergenic	MIRc|SINE|MIR	-10705	NM_183059	343035	Hs.632495	NM_183059	ENSG00000198570	RD3	C1orf36|LCA12	retinal degeneration 3	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr1-1686	chr1	212673476	212674476	+	17.9	1000	Intergenic	Intergenic	-45060	NR_125985	101929565		NR_125985	ENSG00000228067	LINC01740	-	long intergenic non-protein coding RNA 1740	ncRNA	17.92	1.46	12.2739726	2.41E-11
chr1-1688	chr1	223307821	223308821	+	19.2	1000	"intron (NM_003268, intron 3 of 5)"	"intron (NM_003268, intron 3 of 5)"	8303	NM_003268	7100	Hs.604542	NM_003268	ENSG00000187554	TLR5	MELIOS|SLE1|SLEB1|TIL3	toll like receptor 5	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr1-1689	chr1	223536520	223537520	+	17.3	1000	"intron (NM_001037175, intron 1 of 5)"	CpG	524	NM_017982	55061	Hs.497841	NM_017982	ENSG00000143502	SUSD4	PRO222	sushi domain containing 4	protein-coding	17.28	0	17.80043126	3.68E-16
chr1-1691	chr1	226287919	226289188	+	22.4	1269	Intergenic	Intergenic	38125	NR_002315	440926	Hs.533624	NR_002315		H3F3AP4	p13	"H3 histone, family 3A, pseudogene 4"	pseudo	22.4	1.94	11.54639175	8.00E-13
chr1-1695	chr1	234446844	234448576	+	30.1	1732	"intron (NM_001300845, intron 3 of 6)"	MIRb|SINE|MIR	5497	NR_039818	100616380		NR_039818	ENSG00000264377	MIR4671	-	microRNA 4671	ncRNA	30.08	4.85	6.202061856	2.13E-11
chr1-1696	chr1	236575508	236576849	+	22.4	1341	"intron (NM_145861, intron 2 of 5)"	AluSx|SINE|Alu	17462	NM_080738	128178	Hs.352224	NM_080738	ENSG00000186197	EDARADD	ECTD11A|ECTD11B|ED3|EDA3	EDAR associated death domain	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr1-1697	chr1	237300183	237301439	+	20.5	1256	"intron (NM_001035, intron 1 of 104)"	"intron (NM_001035, intron 1 of 104)"	95109	NM_001035	6262	Hs.109514	NM_001035	ENSG00000198626	RYR2	ARVC2|ARVD2|RYR-2|RyR|VTSIP	ryanodine receptor 2	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr1-1701	chr1	968828	970441	+	33.3	1613	"intron (NM_198576, intron 2 of 35)"	CpG	14131	NM_001305275	375790	Hs.273330	NM_198576	ENSG00000188157	AGRN	CMS8|CMSPPD	agrin	protein-coding	33.28	2.91	11.43642612	5.32E-19
chr1-1703	chr1	1947392	1948963	+	28.2	1571	Intergenic	AluSq|SINE|Alu	-2591	NM_000815	2563	Hs.113882	NM_000815	ENSG00000187730	GABRD	EIG10|EJM7|GEFSP5	gamma-aminobutyric acid type A receptor delta subunit	protein-coding	28.16	3.88	7.257731959	1.97E-12
chr1-1709	chr1	2374857	2376231	+	23.7	1374	Intergenic	CpG	-23354	NM_001303012	9651	Hs.170156	NM_014638	ENSG00000149527	PLCH2	PLC-L4|PLC-eta2|PLCL4|PLCeta2	phospholipase C eta 2	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr1-1713	chr1	2575914	2577439	+	23.7	1525	"intron (NM_001242672, intron 5 of 6)"	MIR3|SINE|MIR	-12195	NM_033467	79258	Hs.591453	NM_033467	ENSG00000142606	MMEL1	MMEL2|NEP2|NEPII|NL1|NL2|SEP	membrane metalloendopeptidase like 1	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr1-1714	chr1	2804207	2808370	+	63.4	4163	Intergenic	Intergenic	-100058	NM_001242672	100287898	Hs.632363	NM_001242672	ENSG00000215912	TTC34	-	tetratricopeptide repeat domain 34	protein-coding	63.37	5.82	10.88831615	3.34E-33
chr1-1716	chr1	3039412	3040680	+	21.8	1268	"intron (NM_199454, intron 1 of 16)"	"intron (NM_199454, intron 1 of 16)"	-4493	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	21.76	1.94	11.21649485	8.00E-13
chr1-1731	chr1	7310520	7311780	+	20.5	1260	"intron (NM_015215, intron 5 of 22)"	"intron (NM_015215, intron 5 of 22)"	465766	NR_038934	23261	Hs.397705	NM_015215	ENSG00000171735	CAMTA1	CANPMR	calmodulin binding transcription activator 1	protein-coding	20.48	0	21.09680742	5.97E-21
chr1-1737	chr1	8006638	8007638	+	17.9	1000	Intergenic	L2b|LINE|L2	-3913	NM_001561	3604	Hs.86447	NM_001561	ENSG00000049249	TNFRSF9	4-1BB|CD137|CDw137|ILA	TNF receptor superfamily member 9	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr1-1744	chr1	9220981	9222395	+	25	1414	"intron (NR_132742, intron 1 of 1)"	"intron (NR_132742, intron 1 of 1)"	-9852	NR_029610	407040		NR_029610	ENSG00000228526	MIR34A	MIRN34A|miRNA34A|mir-34|mir-34a	microRNA 34a	ncRNA	24.96	1.94	12.86597938	5.33E-15
chr1-1746	chr1	9241644	9242644	+	18.6	1000	promoter-TSS (NR_132738)	promoter-TSS (NR_132738)	-119	NR_132738	102724571	Hs.599298	NR_132738	ENSG00000234546	LINC01759	-	long intergenic non-protein coding RNA 1759	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr1-1747	chr1	9256979	9258744	+	30.7	1765	Intergenic	Intergenic	-15464	NR_132742	106614088	Hs.551837	NR_132742	ENSG00000228526	MIR34AHG	-	MIR34A host gene	ncRNA	30.72	4.85	6.334020619	3.34E-12
chr1-1751	chr1	9511827	9512827	+	17.9	1000	Intergenic	AluJo|SINE|Alu	-23272	NR_104622	100506022	Hs.131775	NR_104622		LOC100506022	-	uncharacterized LOC100506022	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr1-1754	chr1	10895298	10898538	+	49.9	3240	Intergenic	L2a|LINE|L2	-40185	NM_017766	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	49.93	5.82	8.579037801	2.68E-23
chr1-176	chr1	145035901	145041326	+	227.2	5425	"intron (NM_022359, intron 1 of 6)"	L3|LINE|CR1	1350	NR_144517	100996724	Hs.682380	NR_144516		LOC100996724	-	phosphodiesterase 4D interacting protein-like	pseudo	227.23	52.42	4.334795879	1.42E-55
chr1-1762	chr1	14923720	14927244	+	57	3524	"5' UTR (NM_015209, exon 1 of 8)"	"5' UTR (NM_015209, exon 1 of 8)"	269	NM_201628	23254	Hs.368823	NM_015209	ENSG00000189337	KAZN	KAZ	"kazrin, periplakin interacting protein"	protein-coding	56.97	6.31	9.028526149	9.26E-27
chr1-1763	chr1	15456484	15457484	+	18.6	1000	"intron (NR_027136, intron 1 of 4)"	AluJr|SINE|Alu	21976	NR_027136	200197	Hs.531424	NM_182534	ENSG00000175147	TMEM51-AS1	C1orf126	TMEM51 antisense RNA 1	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr1-1775	chr1	17458152	17459844	+	26.9	1692	Intergenic	AluJo|SINE|Alu	-13050	NM_007365	11240	Hs.33455	NM_007365	ENSG00000117115	PADI2	PAD-H19|PAD2|PDI2	peptidyl arginine deiminase 2	protein-coding	26.88	0.97	27.71134021	2.75E-23
chr1-1778	chr1	17894456	17895744	+	19.2	1288	"intron (NM_018125, intron 1 of 28)"	"intron (NM_018125, intron 1 of 28)"	-11948	NM_001319837	55160	Hs.443460	NM_018125	ENSG00000074964	ARHGEF10L	GrinchGEF	Rho guanine nucleotide exchange factor 10 like	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr1-1782	chr1	18321706	18322706	+	17.3	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	-69945	NR_125946	101927876	Hs.522954	NR_125946	ENSG00000261781	LINC01654	-	long intergenic non-protein coding RNA 1654	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr1-1783	chr1	18353136	18354136	+	18.6	1000	Intergenic	MLT1H2|LTR|ERVL-MaLR	-38515	NR_125946	101927876	Hs.522954	NR_125946	ENSG00000261781	LINC01654	-	long intergenic non-protein coding RNA 1654	ncRNA	18.56	3.4	5.458823529	8.42E-07
chr1-1784	chr1	18533541	18534541	+	17.9	1000	"intron (NM_032880, intron 1 of 9)"	"intron (NM_032880, intron 1 of 9)"	99801	NM_032880	84966	Hs.212511	NM_032880	ENSG00000117154	IGSF21	-	immunoglobin superfamily member 21	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr1-1789	chr1	19303301	19304301	+	16.6	1000	Intergenic	L1MB7|LINE|L1	-20975	NM_001136265	126917	Hs.466625	NM_001136265	ENSG00000169991	IFFO2	-	intermediate filament family orphan 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-1792	chr1	20608896	20609896	+	17.9	1000	Intergenic	Intergenic	-8016	NM_001039500	127731	Hs.205178	NM_144623	ENSG00000158816	VWA5B1	-	von Willebrand factor A domain containing 5B1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr1-1795	chr1	20711728	20713282	+	27.5	1554	"intron (NR_033887, intron 6 of 11)"	"intron (NR_033887, intron 6 of 11)"	42782	NR_033887	339505	Hs.633269	NR_033887		LINC01141	-	long intergenic non-protein coding RNA 1141	ncRNA	27.52	4.85	5.674226804	7.61E-10
chr1-1797	chr1	20857205	20858205	+	17.9	1000	Intergenic	Intergenic	-21227	NM_207334	163933	Hs.429179	NM_207334	ENSG00000183114	FAM43B	-	family with sequence similarity 43 member B	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr1-1801	chr1	21055770	21058127	+	39	2357	"intron (NM_001103161, intron 1 of 9)"	"intron (NM_001103161, intron 1 of 9)"	2185	NM_001103161	400745	Hs.591522	NM_001103160	ENSG00000189410	SH2D5	-	SH2 domain containing 5	protein-coding	39.04	6.31	6.187004754	1.96E-14
chr1-1803	chr1	21907434	21908434	+	18.6	1000	Intergenic	AluYk4|SINE|Alu	70414	NM_001145658	5909	Hs.148178	NM_002885	ENSG00000076864	RAP1GAP	RAP1GA1|RAP1GAP1|RAP1GAPII|RAPGAP	RAP1 GTPase activating protein	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr1-1805	chr1	22219825	22222364	+	35.2	2539	"intron (NM_001291860, intron 3 of 96)"	"intron (NM_001291860, intron 3 of 96)"	42696	NM_001291860	3339	Hs.562227	NM_005529	ENSG00000142798	HSPG2	HSPG|PLC|PRCAN|SJA|SJS|SJS1	heparan sulfate proteoglycan 2	protein-coding	35.2	2.91	12.09621993	4.47E-20
chr1-1821	chr1	24651110	24652110	+	17.9	1000	"intron (NM_021180, intron 1 of 15)"	"intron (NM_021180, intron 1 of 15)"	2080	NM_021180	57822	Hs.657920	NM_021180	ENSG00000158055	GRHL3	SOM|TFCP2L4|VWS2	grainyhead like transcription factor 3	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr1-1824	chr1	26029271	26034320	+	71.7	5049	"intron (NM_020379, intron 2 of 11)"	L1ME4a|LINE|L1	87836	NM_020379	57134	Hs.197043	NM_020379	ENSG00000117643	MAN1C1	HMIC|MAN1A3|MAN1C|pp6318	mannosidase alpha class 1C member 1	protein-coding	71.69	17.47	4.103606182	8.04E-18
chr1-1826	chr1	26125082	26126403	+	22.4	1321	promoter-TSS (NM_020451)	promoter-TSS (NM_020451)	-925	NM_020451	57190	Hs.323396	NM_020451	ENSG00000162430	SELENON	CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1	selenoprotein N	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr1-1827	chr1	26358997	26360712	+	27.5	1715	"intron (NM_004455, intron 8 of 10)"	"intron (NM_004455, intron 8 of 10)"	11583	NM_004455	2134	Hs.150956	NM_004455	ENSG00000158008	EXTL1	EXTL	exostosin like glycosyltransferase 1	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr1-1829	chr1	26419527	26421593	+	39	2066	Intergenic	Intergenic	-17096	NM_001243532	149420	Hs.468801	NM_152835	ENSG00000175087	PDIK1L	CLIK1L|STK35L2	PDLIM1 interacting kinase 1 like	protein-coding	39.04	3.88	10.06185567	5.77E-20
chr1-1830	chr1	26662923	26664841	+	30.7	1918	"intron (NM_001039775, intron 9 of 19)"	"intron (NM_001039775, intron 9 of 19)"	16739	NM_001039775	55057	Hs.128738	NM_017977	ENSG00000176092	AIM1L	CRYBG2	absent in melanoma 1-like	protein-coding	30.72	5.82	5.278350515	1.29E-10
chr1-1832	chr1	26843039	26844473	+	25.6	1434	Intergenic	Intergenic	-12493	NM_002953	6195	Hs.149957	NM_002953	ENSG00000117676	RPS6KA1	HU-1|MAPKAPK1A|RSK|RSK1|p90Rsk	ribosomal protein S6 kinase A1	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr1-1838	chr1	29864040	29865347	+	19.8	1307	Intergenic	Intergenic	-188067	NR_110758	101928460	Hs.434659	NR_110758	ENSG00000230523	LINC01756	-	long intergenic non-protein coding RNA 1756	ncRNA	19.84	1.94	10.22680412	9.57E-11
chr1-184	chr1	161698634	161702005	+	55	3371	Intergenic	Intergenic	7876	NM_001288829	127943	Hs.517422	NM_001002901	ENSG00000162746	FCRLB	FCRL2|FCRLM2|FCRLY|FREB-2|FREB2|FcRY	Fc receptor like B	protein-coding	55.05	7.77	7.084942085	2.06E-22
chr1-1840	chr1	30877507	30878507	+	17.9	1000	Intergenic	Intergenic	-313612	NR_034182	100129196	Hs.659751	NR_034182	ENSG00000186056	MATN1-AS1	-	MATN1 antisense RNA 1	ncRNA	17.92	0.97	18.4742268	1.12E-13
chr1-1842	chr1	31154991	31155991	+	17.9	1000	Intergenic	Intergenic	-36128	NR_034182	100129196	Hs.659751	NR_034182	ENSG00000186056	MATN1-AS1	-	MATN1 antisense RNA 1	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr1-1845	chr1	31380084	31384349	+	55	4265	promoter-TSS (NM_014654)	promoter-TSS (NM_014654)	-736	NM_014654	9672	Hs.158287	NM_014654	ENSG00000162512	SDC3	SDCN|SYND3	syndecan 3	protein-coding	55.05	6.8	8.095588235	1.39E-24
chr1-1848	chr1	32236373	32242588	+	115.9	6215	Intergenic	L2c|LINE|L2	-9816	NM_001294335	576	Hs.524138	NM_001703	ENSG00000121753	ADGRB2	BAI2	adhesion G protein-coupled receptor B2	protein-coding	115.85	16.99	6.818716892	1.56E-43
chr1-1850	chr1	34071307	34074331	+	46.7	3024	"intron (NM_052896, intron 41 of 69)"	"intron (NM_052896, intron 41 of 69)"	134587	NM_145238	7579	Hs.442705	NM_145238	ENSG00000121903	ZSCAN20	KOX29|ZFP-31|ZNF31|ZNF360	zinc finger and SCAN domain containing 20	protein-coding	46.73	9.71	4.812564367	8.12E-14
chr1-1851	chr1	34121399	34122399	+	16.6	1000	"intron (NM_001281956, intron 27 of 70)"	MIRb|SINE|MIR	183667	NM_145238	7579	Hs.442705	NM_145238	ENSG00000121903	ZSCAN20	KOX29|ZFP-31|ZNF31|ZNF360	zinc finger and SCAN domain containing 20	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr1-1852	chr1	34395223	34396525	+	23.7	1302	"intron (NM_001281956, intron 4 of 70)"	MIRb|SINE|MIR	61317	NR_038372	402779	Hs.666207	NR_038372	ENSG00000231163	CSMD2-AS1	-	CSMD2 antisense RNA 1	ncRNA	23.68	1.46	16.21917808	5.41E-16
chr1-1854	chr1	34842652	34843652	+	17.9	1000	Intergenic	Intergenic	200599	NM_001134734	84970	Hs.194610	NM_032884	ENSG00000142698	C1orf94	-	chromosome 1 open reading frame 94	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr1-1855	chr1	35243763	35247382	+	55.7	3619	Intergenic	L2b|LINE|L2	-1218	NM_024009	2707	Hs.522561	NM_024009	ENSG00000188910	GJB3	CX31|DFNA2|DFNA2B|EKV	gap junction protein beta 3	protein-coding	55.69	10.68	5.214419476	2.00E-17
chr1-1859	chr1	36958109	36959405	+	20.5	1296	Intergenic	Intergenic	-9842	NM_156039	1441	Hs.524517	NM_000760	ENSG00000119535	CSF3R	CD114|GCSFR|SCN7	colony stimulating factor 3 receptor	protein-coding	20.48	0	21.09680742	5.97E-21
chr1-1865	chr1	37598674	37600096	+	21.1	1422	Intergenic	Intergenic	-27779	NR_036217	100422898		NR_036217	ENSG00000264698	MIR4255	-	microRNA 4255	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr1-1866	chr1	37866185	37867185	+	17.3	1000	Intergenic	Intergenic	73359	NR_038842	728431	Hs.380738	NR_038842	ENSG00000233621	LINC01137	-	long intergenic non-protein coding RNA 1137	ncRNA	17.28	2.43	7.111111111	1.14E-07
chr1-1867	chr1	38097543	38098543	+	18.6	1000	"intron (NM_001038633, intron 1 of 8)"	"intron (NM_001038633, intron 1 of 8)"	2552	NM_001242910	284654	Hs.135015	NM_173640	ENSG00000169218	RSPO1	CRISTIN3|RSPO	R-spondin 1	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr1-1871	chr1	38182582	38184265	+	28.8	1683	"3' UTR (NM_001099439, exon 17 of 17)"	"3' UTR (NM_001099439, exon 17 of 17)"	25350	NM_001256875	55143	Hs.524571	NM_018101	ENSG00000134690	CDCA8	BOR|BOREALIN|DasraB|MESRGP	cell division cycle associated 8	protein-coding	28.8	3.4	8.470588235	1.50E-13
chr1-1878	chr1	41352346	41353346	+	17.9	1000	Intergenic	Intergenic	-24828	NM_133467	163732	Hs.355820	NM_133467	ENSG00000179862	CITED4	-	Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr1-1883	chr1	43687041	43690148	+	39.7	3107	"exon (NM_001195831, exon 16 of 24)"	"exon (NM_001195831, exon 16 of 24)"	-47071	NM_144626	128218	Hs.104476	NM_144626	ENSG00000179178	TMEM125	-	transmembrane protein 125	protein-coding	39.69	9.71	4.08753862	1.52E-10
chr1-1886	chr1	44596663	44597992	+	19.8	1329	"intron (NM_173484, intron 3 of 3)"	LTR16D|LTR|ERVL	12805	NM_173484	128209	Hs.567674	NM_173484	ENSG00000171872	KLF17	ZNF393|Zfp393	Kruppel like factor 17	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr1-1893	chr1	46948796	46949796	+	17.9	1000	Intergenic	Intergenic	-23372	NM_147192	127343	Hs.375623	NM_147192	ENSG00000197587	DMBX1	MBX|OTX3|PAXB	diencephalon/mesencephalon homeobox 1	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr1-1894	chr1	47465895	47466895	+	18.6	1000	"intron (NM_001320289, intron 1 of 11)"	(CAGG)n|Simple_repeat|Simple_repeat	-3517	NM_001320290	260293	Hs.439760	NM_178033	ENSG00000186377	CYP4X1	CYPIVX1	cytochrome P450 family 4 subfamily X member 1	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr1-1895	chr1	48183634	48185201	+	24.3	1567	Intergenic	Intergenic	278145	NM_001194986	388630	Hs.61504	NM_001194986	ENSG00000269113	TRABD2B	TIKI2	TraB domain containing 2B	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr1-1897	chr1	50610396	50611396	+	18.6	1000	"intron (NR_136725, intron 3 of 4)"	"intron (NR_136725, intron 3 of 4)"	35608	NM_001324215	1996	Hs.213050	NM_021952	ENSG00000162374	ELAVL4	HUD|PNEM	ELAV like RNA binding protein 4	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr1-1898	chr1	53810609	53811609	+	18.6	1000	Intergenic	AluJo|SINE|Alu	17204	NR_131923	105378732	Hs.118609	NR_131923	ENSG00000225675	LINC01771	-	long intergenic non-protein coding RNA 1771	ncRNA	18.56	4.37	4.247139588	1.41E-05
chr1-1903	chr1	53948696	53950761	+	37.1	2065	Intergenic	Intergenic	24656	NM_033067	63948	Hs.131654	NM_033067	ENSG00000143006	DMRTB1	-	DMRT like family B with proline rich C-terminal 1	protein-coding	37.12	4.85	7.653608247	1.78E-16
chr1-1909	chr1	56961013	56962271	+	20.5	1258	"3' UTR (NM_003713, exon 6 of 6)"	"3' UTR (NM_003713, exon 6 of 6)"	83615	NM_003713	8613	Hs.405156	NM_003713	ENSG00000162407	PLPP3	Dri42|LPP3|PAP2B|PPAP2B|VCIP	phospholipid phosphatase 3	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr1-1914	chr1	64240044	64245461	+	89.6	5417	"intron (NM_001083592, intron 1 of 6)"	"intron (NM_001083592, intron 1 of 6)"	3062	NM_001083592	4919	Hs.128753	NM_005012	ENSG00000185483	ROR1	NTRKR1|dJ537F10.1	receptor tyrosine kinase like orphan receptor 1	protein-coding	89.61	15.53	5.770122344	4.09E-30
chr1-1918	chr1	71512797	71514144	+	24.3	1347	promoter-TSS (NR_028294)	promoter-TSS (NR_028294)	21	NM_198715	5733	Hs.445000	NM_000957	ENSG00000050628	PTGER3	EP3|EP3-I|EP3-II|EP3-III|EP3-IV|EP3-VI|EP3e|PGE2-R	prostaglandin E receptor 3	protein-coding	24.32	1.46	16.65753425	3.23E-17
chr1-1922	chr1	91177636	91181001	+	66.6	3365	"intron (NM_020063, intron 2 of 2)"	"intron (NM_020063, intron 2 of 2)"	3476	NM_020063	343472	Hs.451956	NM_020063	ENSG00000143032	BARHL2	-	BarH like homeobox 2	protein-coding	66.57	15.05	4.423255814	5.58E-18
chr1-1924	chr1	91306988	91307988	+	18.6	1000	"intron (NR_135038, intron 1 of 2)"	"intron (NR_135038, intron 1 of 2)"	9707	NR_135038	105378853	Hs.546492	NR_135038	ENSG00000233593	LOC105378853	-	uncharacterized LOC105378853	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr1-1926	chr1	91598697	91599697	+	17.9	1000	Intergenic	MIR|SINE|MIR	-111385	NM_032186	84146	Hs.173001	NM_016620	ENSG00000122482	ZNF644	BM-005|MYP21|NatF|ZEP-2	zinc finger protein 644	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr1-1930	chr1	98512104	98513104	+	18.6	1000	promoter-TSS (NR_029679)	promoter-TSS (NR_029679)	-877	NR_029679	406928		NR_029679	ENSG00000225206	MIR137	MIRN137|miR-137	microRNA 137	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr1-1936	chr1	110632455	110633455	+	15.4	1000	"intron (NR_126382, intron 1 of 3)"	"intron (NR_126382, intron 1 of 3)"	7645	NR_126382	104355139	Hs.628193	NR_126382	ENSG00000258673	LINC01397	-	long intergenic non-protein coding RNA 1397	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr1-1938	chr1	111127297	111128796	+	26.9	1499	Intergenic	Intergenic	20929	NM_004974	3737	Hs.248139	NM_004974	ENSG00000177301	KCNA2	EIEE32|HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2	potassium voltage-gated channel subfamily A member 2	protein-coding	26.88	1.94	13.8556701	2.90E-17
chr1-1945	chr1	112395812	112396812	+	18.6	1000	TTS (NR_046783)	TTS (NR_046783)	3215	NR_046783	100874295	Hs.738190	NR_046783	ENSG00000232558	KCND3-IT1	-	KCND3 intronic transcript 1	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr1-1947	chr1	113391793	113393070	+	21.8	1277	"non-coding (NR_103746, exon 1 of 7)"	"non-coding (NR_103746, exon 1 of 7)"	834	NR_103746	100996702	Hs.632431	NR_103746	ENSG00000215866	LINC01356	-	long intergenic non-protein coding RNA 1356	ncRNA	21.76	3.88	5.608247423	2.53E-08
chr1-1955	chr1	119454746	119455746	+	17.3	1000	"intron (NM_001330677, intron 6 of 7)"	"intron (NM_001330677, intron 6 of 7)"	75230	NM_001330677	6913	Hs.146196	NM_152380	ENSG00000092607	TBX15	TBX14	T-box 15	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-1956	chr1	121137866	121138866	+	17.9	1000	"intron (NR_104189, intron 2 of 3)"	CpG	1399	NR_104189	100873165	Hs.568525	NR_104189	ENSG00000230806	SRGAP2-AS1	-	SRGAP2 antisense RNA 1	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr1-197	chr1	40781871	40783630	+	40.3	1759	"intron (NM_001852, intron 1 of 31)"	CpG	189	NM_001852	1298	Hs.418012	NM_001852	ENSG00000049089	COL9A2	DJ39G22.4|EDM2|MED|STL5	collagen type IX alpha 2 chain	protein-coding	40.33	5.82	6.929553265	3.74E-16
chr1-1974	chr1	152198681	152199681	+	17.3	1000	Intergenic	Intergenic	-2509	NM_001009931	388697	Hs.490162	NM_001009931	ENSG00000197915	HRNR	FLG3|S100A16|S100a18	hornerin	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr1-1975	chr1	153392430	153393430	+	18.6	1000	"3' UTR (NM_176823, exon 3 of 3)"	"3' UTR (NM_176823, exon 3 of 3)"	2129	NM_001319198	6279	Hs.416073	NM_002964	ENSG00000143546	S100A8	60B8AG|CAGA|CFAG|CGLA|CP-10|L1Ag|MA387|MIF|MRP8|NIF|P8	S100 calcium binding protein A8	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr1-1977	chr1	154492834	154494446	+	23	1612	"intron (NM_182499, intron 5 of 12)"	"intron (NM_182499, intron 5 of 12)"	18945	NM_001098475	126668	Hs.387671	NM_182499	ENSG00000163239	TDRD10	-	tudor domain containing 10	protein-coding	23.04	0.97	23.75257732	5.03E-19
chr1-1978	chr1	154753138	154754499	+	24.3	1361	"intron (NM_002249, intron 2 of 7)"	MIR3|SINE|MIR	78520	NM_170782	3782	Hs.490765	NM_002249	ENSG00000143603	KCNN3	KCa2.3|SK3|SKCA3|hSK3	potassium calcium-activated channel subfamily N member 3	protein-coding	24.32	4.37	5.565217391	4.38E-09
chr1-1980	chr1	154856587	154858390	+	31.4	1803	Intergenic	Intergenic	-14734	NM_002249	3782	Hs.490765	NM_002249	ENSG00000143603	KCNN3	KCa2.3|SK3|SKCA3|hSK3	potassium calcium-activated channel subfamily N member 3	protein-coding	31.36	4.85	6.465979381	3.34E-12
chr1-1986	chr1	156587075	156588075	+	17.9	1000	"intron (NR_135113, intron 1 of 1)"	"intron (NR_135113, intron 1 of 1)"	-1511	NM_021817	60484	Hs.410719	NM_021817	ENSG00000132702	HAPLN2	BRAL1	hyaluronan and proteoglycan link protein 2	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr1-1991	chr1	157238322	157239577	+	20.5	1255	Intergenic	AluY|SINE|Alu	-130566	NM_001145312	2117	Hs.105636	NM_005240	ENSG00000117036	ETV3	METS|PE-1|PE1|bA110J1.4	ETS variant 3	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr1-1992	chr1	159103963	159104963	+	17.9	1000	Intergenic	AluSx1|SINE|Alu	-36891	NM_021189	57863	Hs.365689	NM_021189	ENSG00000162706	CADM3	BIgR|IGSF4B|NECL1|Necl-1|TSLL1|synCAM3	cell adhesion molecule 3	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr1-1994	chr1	159115013	159116323	+	19.8	1310	Intergenic	AluSc|SINE|Alu	-25686	NM_021189	57863	Hs.365689	NM_021189	ENSG00000162706	CADM3	BIgR|IGSF4B|NECL1|Necl-1|TSLL1|synCAM3	cell adhesion molecule 3	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr1-1995	chr1	159174850	159176370	+	22.4	1520	"exon (NM_002036, exon 2 of 2)"	"exon (NM_002036, exon 2 of 2)"	561	NM_001122951	2532	Hs.153381	NM_002036	ENSG00000213088	ACKR1	CCBP1|CD234|DARC|DARC/ACKR1|Dfy|FY|GPD|GpFy|WBCQ1	atypical chemokine receptor 1 (Duffy blood group)	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr1-2000	chr1	161996040	161997365	+	19.8	1325	Intergenic	LTR26|LTR|ERV1	-2447	NM_015441	25903	Hs.507515	NM_015441	ENSG00000162745	OLFML2B	-	olfactomedin like 2B	protein-coding	19.84	0	20.43753219	2.52E-19
chr1-2008	chr1	171231904	171232904	+	17.9	1000	"intron (NM_001282694, intron 2 of 7)"	"intron (NM_001282694, intron 2 of 7)"	5342	NM_001282692	2326	Hs.1424	NM_002021	ENSG00000010932	FMO1	-	flavin containing monooxygenase 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr1-2010	chr1	178547051	178548051	+	17.3	1000	Intergenic	Intergenic	35620	NR_033186	400798	Hs.668085	NM_207467	ENSG00000213057	C1orf220	-	chromosome 1 open reading frame 220	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr1-2013	chr1	180197859	180202722	+	72.3	4863	"intron (NM_033343, intron 1 of 5)"	CpG-1965	857	NM_033343	89884	Hs.658487	NM_033343	ENSG00000121454	LHX4	CPHD4	LIM homeobox 4	protein-coding	72.33	10.19	7.098135427	1.63E-28
chr1-2014	chr1	181438561	181439817	+	20.5	1256	Intergenic	(GA)n|Simple_repeat|Simple_repeat	-13497	NM_001205293	777	Hs.437444	NM_000721	ENSG00000198216	CACNA1E	BII|CACH6|CACNL1A6|Cav2.3|gm139	calcium voltage-gated channel subunit alpha1 E	protein-coding	20.48	1.46	14.02739726	1.29E-13
chr1-2015	chr1	181722525	181723797	+	19.8	1272	"intron (NM_001205294, intron 26 of 45)"	"intron (NM_001205294, intron 26 of 45)"	270475	NM_001205294	777	Hs.437444	NM_000721	ENSG00000198216	CACNA1E	BII|CACH6|CACNL1A6|Cav2.3|gm139	calcium voltage-gated channel subunit alpha1 E	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr1-2017	chr1	182757620	182758953	+	19.8	1333	promoter-TSS (NM_001200056)	promoter-TSS (NM_001200056)	-298	NM_001200052	80896	Hs.496969	NM_030769	ENSG00000135838	NPL	C112|C1orf13|NAL|NPL1	N-acetylneuraminate pyruvate lyase	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr1-2019	chr1	183192244	183193244	+	18.6	1000	"intron (NM_018891, intron 7 of 21)"	L2c|LINE|L2	37570	NM_018891	3918	Hs.591484	NM_005562	ENSG00000058085	LAMC2	B2T|BM600|CSF|EBR2|EBR2A|LAMB2T|LAMNB2	laminin subunit gamma 2	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr1-2020	chr1	183195669	183196669	+	16.6	1000	"intron (NM_018891, intron 9 of 21)"	"intron (NM_018891, intron 9 of 21)"	40995	NM_018891	3918	Hs.591484	NM_005562	ENSG00000058085	LAMC2	B2T|BM600|CSF|EBR2|EBR2A|LAMB2T|LAMNB2	laminin subunit gamma 2	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr1-2023	chr1	200434530	200435530	+	17.9	1000	Intergenic	Intergenic	-55844	NM_012482	23528	Hs.59757	NM_012482	ENSG00000162702	ZNF281	ZBP-99|ZNP-99	zinc finger protein 281	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr1-2027	chr1	201180928	201181928	+	16.6	1000	"exon (NM_001164586, exon 12 of 24)"	"exon (NM_001164586, exon 12 of 24)"	21475	NM_001164586	91156	Hs.519024	NM_178275	ENSG00000163395	IGFN1	EEF1A2BP1	immunoglobulin-like and fibronectin type III domain containing 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-2029	chr1	201219680	201220943	+	20.5	1263	Intergenic	Intergenic	-32269	NM_001005337	5317	Hs.497350	NM_000299	ENSG00000081277	PKP1	B6P	plakophilin 1	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr1-2031	chr1	201348640	201352058	+	42.2	3418	"3' UTR (NM_005558, exon 10 of 10)"	"3' UTR (NM_005558, exon 10 of 10)"	-3521	NM_001001432	7139	Hs.533613	NM_000364	ENSG00000118194	TNNT2	CMD1D|CMH2|CMPD2|LVNC6|RCM3|TnTC|cTnT	"troponin T2, cardiac type"	protein-coding	42.25	9.71	4.351184346	8.16E-12
chr1-2033	chr1	201708363	201711541	+	63.4	3178	"intron (NM_001167738, intron 1 of 26)"	"intron (NM_001167738, intron 1 of 26)"	989	NM_001167738	89796	Hs.585374	NM_020443	ENSG00000134369	NAV1	POMFIL3|STEERIN1|UNC53H1	neuron navigator 1	protein-coding	63.37	9.71	6.526261586	1.28E-23
chr1-2034	chr1	201733104	201734104	+	16.6	1000	"intron (NM_001167738, intron 1 of 26)"	MLT1B|LTR|ERVL-MaLR	24641	NM_001167738	89796	Hs.585374	NM_020443	ENSG00000134369	NAV1	POMFIL3|STEERIN1|UNC53H1	neuron navigator 1	protein-coding	16.64	0.49	33.95918367	3.68E-16
chr1-2037	chr1	202677146	202680224	+	55.7	3078	"intron (NM_177402, intron 1 of 8)"	"intron (NM_177402, intron 1 of 8)"	866	NM_177402	127833	Hs.25422	NM_177402	ENSG00000143858	SYT2	CMS7|MYSPC|SytII	synaptotagmin 2	protein-coding	55.69	5.34	10.42883895	1.32E-28
chr1-2039	chr1	202829592	202831859	+	44.2	2267	promoter-TSS (NR_002929)	promoter-TSS (NR_002929)	-157	NR_002929	148709	Hs.162880	NR_002929	ENSG00000234996	LOC148709	-	actin pseudogene	pseudo	44.17	3.88	11.38402062	4.33E-24
chr1-2042	chr1	203131091	203132342	+	19.2	1251	"intron (NM_001048230, intron 2 of 2)"	"intron (NM_001048230, intron 2 of 2)"	13226	NM_004997	4608	Hs.927	NM_004997	ENSG00000133055	MYBPH	-	myosin binding protein H	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr1-2051	chr1	205008634	205011812	+	48	3178	Intergenic	Intergenic	-1842	NM_001346083	6900	Hs.519220	NM_005076	ENSG00000184144	CNTN2	AXT|FAME5|TAG-1|TAX|TAX1	contactin 2	protein-coding	48.01	8.74	5.493135011	6.98E-16
chr1-2065	chr1	208798505	208799505	+	17.9	1000	Intergenic	AluSg|SINE|Alu	-381340	NM_025179	5362	Hs.497626	NM_025179	ENSG00000076356	PLXNA2	OCT|PLXN2	plexin A2	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr1-2067	chr1	210404021	210410984	+	96	6963	promoter-TSS (NR_024337)	promoter-TSS (NR_024337)	-36	NR_024337	574036	Hs.446946	NR_024337	ENSG00000203706	SERTAD4-AS1	C1orf133	SERTAD4 antisense RNA 1	ncRNA	96.01	14.56	6.594093407	8.53E-36
chr1-2068	chr1	210464949	210468796	+	57.6	3847	Intergenic	Intergenic	-34724	NM_001170564	55733	Hs.58650	NM_018194	ENSG00000054392	HHAT	MART2|SKI1|Skn	hedgehog acyltransferase	protein-coding	57.61	12.62	4.564976228	2.92E-16
chr1-2071	chr1	213787109	213789381	+	32	2272	Intergenic	AluJr|SINE|Alu	-309847	NR_046189	100861504	Hs.742586	NR_046189		LINC00538	PROX1UT|Yiya	long intergenic non-protein coding RNA 538	ncRNA	32	4.85	6.597938144	5.03E-13
chr1-2074	chr1	226692703	226693703	+	16.6	1000	Intergenic	Intergenic	-43298	NM_001003665	375057	Hs.116827	NM_001003665	ENSG00000203685	STUM	C1orf95	"stum, mechanosensory transduction mediator homolog"	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-2075	chr1	226748642	226749642	+	17.3	1000	"intron (NM_001003665, intron 1 of 3)"	"intron (NM_001003665, intron 1 of 3)"	12641	NM_001003665	375057	Hs.116827	NM_001003665	ENSG00000203685	STUM	C1orf95	"stum, mechanosensory transduction mediator homolog"	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr1-2079	chr1	231212385	231213663	+	19.8	1278	Intergenic	MER5B|DNA|hAT-Charlie	-37029	NM_198552	375061	Hs.38516	NM_198552	ENSG00000182118	FAM89A	C1orf153	family with sequence similarity 89 member A	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr1-2080	chr1	234227060	234228060	+	17.9	1000	"intron (NM_173508, intron 2 of 7)"	"intron (NM_173508, intron 2 of 7)"	-122397	NM_001300845	148641	Hs.158748	NM_173508	ENSG00000183780	SLC35F3	-	solute carrier family 35 member F3	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr1-2083	chr1	236287119	236288119	+	18.6	1000	Intergenic	Intergenic	-18213	NM_003272	7107	Hs.498160	NM_003272	ENSG00000077585	GPR137B	TM7SF1	G protein-coupled receptor 137B	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr1-2084	chr1	236293688	236294688	+	17.9	1000	Intergenic	Intergenic	-11644	NM_003272	7107	Hs.498160	NM_003272	ENSG00000077585	GPR137B	TM7SF1	G protein-coupled receptor 137B	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr1-2085	chr1	236558566	236559566	+	16	1000	"intron (NM_080738, intron 1 of 5)"	CpG	350	NM_080738	128178	Hs.352224	NM_080738	ENSG00000186197	EDARADD	ECTD11A|ECTD11B|ED3|EDA3	EDAR associated death domain	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-2094	chr1	1359483	1360840	+	20.5	1357	Intergenic	Intergenic	-1347	NM_001146685	643965	Hs.729765	NM_001146685	ENSG00000205116	TMEM88B	-	transmembrane protein 88B	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr1-2095	chr1	1386764	1387764	+	16.6	1000	"intron (NM_001039211, intron 1 of 11)"	"intron (NM_001039211, intron 1 of 11)"	2195	NM_001039211	219293	Hs.724767	NM_001039211	ENSG00000215915	ATAD3C	-	"ATPase family, AAA domain containing 3C"	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-2096	chr1	1516291	1517291	+	17.9	1000	Intergenic	AluJo|SINE|Alu	-6529	NM_014188	29101	Hs.30026	NM_014188	ENSG00000160075	SSU72	HSPC182|PNAS-120	"SSU72 homolog, RNA polymerase II CTD phosphatase"	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr1-2101	chr1	2098162	2099683	+	26.2	1521	"intron (NM_001033581, intron 7 of 14)"	"intron (NM_001033581, intron 7 of 14)"	27292	NM_001282671	199990	Hs.107101	NM_182533	ENSG00000162585	FAAP20	C1orf86|FP7162	Fanconi anemia core complex associated protein 20	protein-coding	26.24	4.37	6.004576659	7.40E-10
chr1-2102	chr1	2138169	2139936	+	26.2	1767	"5' UTR (NM_001146310, exon 1 of 8)"	"5' UTR (NM_001146310, exon 1 of 8)"	120	NM_001146310	199990	Hs.107101	NM_182533	ENSG00000162585	FAAP20	C1orf86|FP7162	Fanconi anemia core complex associated protein 20	protein-coding	26.24	3.4	7.717647059	9.95E-12
chr1-2107	chr1	2504709	2505709	+	16.6	1000	"intron (NR_121638, intron 1 of 3)"	L1ME1|LINE|L1	7235	NR_121638	100996583	Hs.444114	NR_121638	ENSG00000228037	LOC100996583	-	uncharacterized LOC100996583	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr1-2109	chr1	2761680	2765109	+	51.8	3429	Intergenic	Charlie25|DNA|hAT-Charlie	-57164	NM_001242672	100287898	Hs.632363	NM_001242672	ENSG00000215912	TTC34	-	tetratricopeptide repeat domain 34	protein-coding	51.85	6.31	8.217115689	5.17E-23
chr1-2117	chr1	3105023	3106462	+	23	1439	"intron (NM_199454, intron 2 of 16)"	"intron (NM_199454, intron 2 of 16)"	61203	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	23.04	4.85	4.750515464	1.15E-07
chr1-2120	chr1	3150531	3154146	+	46.7	3615	"intron (NM_199454, intron 2 of 16)"	"intron (NM_199454, intron 2 of 16)"	107799	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	46.73	10.68	4.375468165	1.21E-12
chr1-2121	chr1	3247429	3248916	+	25	1487	"intron (NM_199454, intron 3 of 16)"	"intron (NM_199454, intron 3 of 16)"	-122975	NM_014448	27237	Hs.87435	NM_014448	ENSG00000130762	ARHGEF16	GEF16|NBR	Rho guanine nucleotide exchange factor 16	protein-coding	24.96	3.4	7.341176471	7.55E-11
chr1-2123	chr1	3314433	3315995	+	23.7	1562	"intron (NM_199454, intron 5 of 16)"	"intron (NM_199454, intron 5 of 16)"	-55933	NM_014448	27237	Hs.87435	NM_014448	ENSG00000130762	ARHGEF16	GEF16|NBR	Rho guanine nucleotide exchange factor 16	protein-coding	23.68	3.4	6.964705882	5.45E-10
chr1-2128	chr1	4057789	4059114	+	23	1325	Intergenic	Kanga1b|DNA|TcMar-Tc2	57779	NR_040065	728716	Hs.668359	NR_040065		LINC01346	-	long intergenic non-protein coding RNA 1346	ncRNA	23.04	2.91	7.917525773	4.85E-11
chr1-2129	chr1	4176469	4177469	+	16.6	1000	Intergenic	AluSc|SINE|Alu	176297	NR_040065	728716	Hs.668359	NR_040065		LINC01346	-	long intergenic non-protein coding RNA 1346	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr1-2130	chr1	4228895	4229895	+	17.3	1000	Intergenic	Intergenic	228723	NR_040065	728716	Hs.668359	NR_040065		LINC01346	-	long intergenic non-protein coding RNA 1346	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr1-2131	chr1	4500296	4501556	+	19.8	1260	Intergenic	LTR8|LTR|ERV1	28815	NR_027088	284661	Hs.278112	NR_027088	ENSG00000235054	LINC01777	-	long intergenic non-protein coding RNA 1777	ncRNA	19.84	3.88	5.113402062	7.67E-07
chr1-2134	chr1	7096258	7098741	+	38.4	2483	"intron (NM_015215, intron 3 of 22)"	"intron (NM_015215, intron 3 of 22)"	252115	NR_038934	23261	Hs.397705	NM_015215	ENSG00000171735	CAMTA1	CANPMR	calmodulin binding transcription activator 1	protein-coding	38.4	7.77	4.942084942	3.34E-12
chr1-2135	chr1	7194940	7196369	+	25.6	1429	"intron (NM_015215, intron 4 of 22)"	L2|LINE|L2	350270	NR_038934	23261	Hs.397705	NM_015215	ENSG00000171735	CAMTA1	CANPMR	calmodulin binding transcription activator 1	protein-coding	25.6	2.91	8.797250859	6.53E-13
chr1-2137	chr1	7513907	7514907	+	17.3	1000	"intron (NM_015215, intron 5 of 22)"	"intron (NM_015215, intron 5 of 22)"	-316922	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr1-2140	chr1	7648149	7653399	+	83.2	5250	"intron (NM_015215, intron 6 of 22)"	"intron (NM_015215, intron 6 of 22)"	-180555	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	83.21	9.71	8.569515963	1.08E-37
chr1-2143	chr1	7730629	7731629	+	17.3	1000	"intron (NM_015215, intron 10 of 22)"	"intron (NM_015215, intron 10 of 22)"	-100200	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr1-2145	chr1	7792311	7793311	+	16	1000	"intron (NM_015215, intron 12 of 22)"	"intron (NM_015215, intron 12 of 22)"	-38518	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	16	0.97	16.49484536	3.54E-11
chr1-2146	chr1	8002700	8003700	+	17.9	1000	promoter-TSS (NM_001561)	promoter-TSS (NM_001561)	25	NM_001561	3604	Hs.86447	NM_001561	ENSG00000049249	TNFRSF9	4-1BB|CD137|CDw137|ILA	TNF receptor superfamily member 9	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr1-2147	chr1	8126702	8127702	+	17.9	1000	Intergenic	AluSz6|SINE|Alu	-40809	NM_018948	54206	Hs.605445	NM_018948	ENSG00000116285	ERRFI1	GENE-33|MIG-6|MIG6|RALT	ERBB receptor feedback inhibitor 1	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr1-2151	chr1	8762823	8763823	+	16.6	1000	"intron (NM_001042681, intron 1 of 22)"	CpG	114376	NM_012102	473	Hs.463041	NM_012102	ENSG00000142599	RERE	ARG|ARP|ATN1L|DNB1|NEDBEH	arginine-glutamic acid dipeptide repeats	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr1-2152	chr1	9015218	9016218	+	16.6	1000	"intron (NM_001270500, intron 2 of 7)"	"intron (NM_001270500, intron 2 of 7)"	9825	NM_001270502	765	Hs.100322	NM_001215	ENSG00000131686	CA6	CA-VI|GUSTIN	carbonic anhydrase 6	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-2155	chr1	9236041	9237041	+	17.3	1000	"intron (NR_132742, intron 1 of 1)"	AluJb|SINE|Alu	-5722	NR_132738	102724571	Hs.599298	NR_132738	ENSG00000234546	LINC01759	-	long intergenic non-protein coding RNA 1759	ncRNA	17.28	2.43	7.111111111	1.14E-07
chr1-2156	chr1	9542182	9543437	+	19.2	1255	Intergenic	MIR|SINE|MIR	-53754	NR_104622	100506022	Hs.131775	NR_104622		LOC100506022	-	uncharacterized LOC100506022	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr1-2161	chr1	10806213	10807480	+	17.9	1267	"intron (NM_017766, intron 2 of 15)"	"intron (NM_017766, intron 2 of 15)"	49887	NM_001079843	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr1-2167	chr1	11002964	11004329	+	21.1	1365	Intergenic	MIR3|SINE|MIR	38448	NM_001170754	148345	Hs.127026	NM_173507	ENSG00000175262	C1orf127	-	chromosome 1 open reading frame 127	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr1-2171	chr1	12756344	12757344	+	16.6	1000	Intergenic	Tigger7|DNA|TcMar-Tigger	-19274	NM_001103170	126767	Hs.464705	NM_001103169	ENSG00000188984	AADACL3	-	arylacetamide deacetylase like 3	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-2174	chr1	14937404	14938404	+	17.9	1000	"intron (NM_201628, intron 1 of 14)"	"intron (NM_201628, intron 1 of 14)"	12691	NM_201628	23254	Hs.368823	NM_015209	ENSG00000189337	KAZN	KAZ	"kazrin, periplakin interacting protein"	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr1-2179	chr1	15517144	15518466	+	24.3	1322	"intron (NM_018022, intron 1 of 2)"	MLT1D|LTR|ERVL-MaLR	-19685	NM_001278502	727684	Hs.667584	NM_001278501		C1orf195	-	chromosome 1 open reading frame 195	protein-coding	24.32	2.91	8.357388316	5.77E-12
chr1-2187	chr1	17047095	17048095	+	17.3	1000	promoter-TSS (NR_026567)	promoter-TSS (NR_026567)	-943	NR_026567	284729	Hs.548239	NR_026567	ENSG00000268869	ESPNP	dJ1182A14.1	espin pseudogene	pseudo	17.28	3.88	4.453608247	1.81E-05
chr1-2194	chr1	17215398	17216777	+	21.1	1379	promoter-TSS (NR_135059)	promoter-TSS (NR_135059)	74	NR_135059	105376805	Hs.465405	NR_135056	ENSG00000238142	LOC105376805	-	uncharacterized LOC105376805	ncRNA	21.12	0.97	21.77319588	2.68E-16
chr1-2201	chr1	18411453	18412453	+	17.9	1000	Intergenic	MLT1F2|LTR|ERVL-MaLR	19802	NR_125946	101927876	Hs.522954	NR_125946	ENSG00000261781	LINC01654	-	long intergenic non-protein coding RNA 1654	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr1-2206	chr1	18869286	18871017	+	26.2	1731	Intergenic	MLT1D|LTR|ERVL-MaLR	62727	NM_152375	127707	Hs.406913	NM_152375	ENSG00000179023	KLHDC7A	-	kelch domain containing 7A	protein-coding	26.24	2.91	9.017182131	6.53E-13
chr1-2207	chr1	18888080	18889346	+	22.4	1266	Intergenic	Intergenic	-68787	NM_013945	5081	Hs.113253	NM_002584	ENSG00000009709	PAX7	HUP1|PAX7B|RMS2	paired box 7	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr1-2208	chr1	18909686	18910686	+	16	1000	Intergenic	Intergenic	-47314	NM_013945	5081	Hs.113253	NM_002584	ENSG00000009709	PAX7	HUP1|PAX7B|RMS2	paired box 7	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-2213	chr1	19042409	19045306	+	48.6	2897	"intron (NM_002584, intron 7 of 7)"	"intron (NM_002584, intron 7 of 7)"	86357	NM_002584	5081	Hs.113253	NM_002584	ENSG00000009709	PAX7	HUP1|PAX7B|RMS2	paired box 7	protein-coding	48.65	3.88	12.53865979	2.05E-28
chr1-2214	chr1	19074306	19075306	+	15.4	1000	"3' UTR (NM_001135254, exon 9 of 9)"	"3' UTR (NM_001135254, exon 9 of 9)"	111349	NM_152232	80834	Hs.553548	NM_152232	ENSG00000179002	TAS1R2	GPR71|T1R2|TR2	taste 1 receptor member 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-2215	chr1	19187012	19188012	+	16.6	1000	Intergenic	AluSx|SINE|Alu	-1357	NM_152232	80834	Hs.553548	NM_152232	ENSG00000179002	TAS1R2	GPR71|T1R2|TR2	taste 1 receptor member 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-2220	chr1	20436800	20437800	+	16.6	1000	Intergenic	MLT1L|LTR|ERVL-MaLR	8759	NM_012400	26279	Hs.189507	NM_012400	ENSG00000117215	PLA2G2D	PLA2IID|SPLASH|sPLA2-IID|sPLA2S	phospholipase A2 group IID	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-2223	chr1	20643119	20644119	+	17.9	1000	"intron (NM_001039500, intron 4 of 21)"	AluY|SINE|Alu	26207	NM_001039500	127731	Hs.205178	NM_144623	ENSG00000158816	VWA5B1	-	von Willebrand factor A domain containing 5B1	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr1-2225	chr1	20743646	20744646	+	16.6	1000	"intron (NR_033887, intron 1 of 11)"	"intron (NR_033887, intron 1 of 11)"	11141	NR_033887	339505	Hs.633269	NR_033887		LINC01141	-	long intergenic non-protein coding RNA 1141	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr1-2229	chr1	22542280	22548070	+	95.4	5790	Intergenic	MIR|SINE|MIR	-47557	NR_039613	100616433		NR_039613	ENSG00000266564	MIR4418	-	microRNA 4418	ncRNA	95.37	20.39	4.677292791	4.18E-26
chr1-2233	chr1	22652065	22655671	+	58.9	3606	Intergenic	Intergenic	61136	NR_039613	100616433		NR_039613	ENSG00000266564	MIR4418	-	microRNA 4418	ncRNA	58.89	9.71	6.064881565	3.28E-21
chr1-2235	chr1	22688312	22690147	+	33.3	1835	Intergenic	MIRb|SINE|MIR	-89115	NM_001330398	9923	Hs.418966	NM_014870	ENSG00000184677	ZBTB40	ZNF923	zinc finger and BTB domain containing 40	protein-coding	33.28	2.91	11.43642612	5.32E-19
chr1-2237	chr1	23001150	23003430	+	35.2	2280	Intergenic	Intergenic	22816	NM_000491	713	Hs.8986	NM_000491	ENSG00000173369	C1QB	-	complement C1q B chain	protein-coding	35.2	5.82	6.048109966	6.75E-13
chr1-2241	chr1	23105205	23106492	+	19.8	1287	"intron (NM_017449, intron 1 of 15)"	"intron (NM_017449, intron 1 of 15)"	59838	NR_039832	100616391		NR_039832	ENSG00000265422	MIR4684	-	microRNA 4684	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr1-2244	chr1	23199843	23204209	+	62.7	4366	"intron (NM_017449, intron 5 of 15)"	"intron (NM_017449, intron 5 of 15)"	-12307	NR_036214	100422914		NR_036214	ENSG00000264014	MIR4253	-	microRNA 4253	ncRNA	62.73	12.13	5.17147568	1.13E-19
chr1-2249	chr1	23803940	23804940	+	17.9	1000	"intron (NM_017707, intron 1 of 24)"	L2b|LINE|L2	6310	NM_017707	55616	Hs.437379	NM_017707	ENSG00000088280	ASAP3	ACAP4|CENTB6|DDEFL1|UPLC1	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 3"	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr1-2250	chr1	23809571	23810571	+	17.9	1000	"intron (NM_017707, intron 1 of 24)"	CpG	679	NM_017707	55616	Hs.437379	NM_017707	ENSG00000088280	ASAP3	ACAP4|CENTB6|DDEFL1|UPLC1	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 3"	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr1-2251	chr1	24376841	24379162	+	48	2321	Intergenic	MIRb|SINE|MIR	60664	NM_152372	127294	Hs.523413	NM_152372	ENSG00000142661	MYOM3	-	myomesin 3	protein-coding	48.01	10.68	4.495318352	2.70E-13
chr1-2252	chr1	24446961	24449250	+	35.8	2289	"exon (NM_021258, exon 7 of 7)"	"exon (NM_021258, exon 7 of 7)"	-9440	NM_152372	127294	Hs.523413	NM_152372	ENSG00000142661	MYOM3	-	myomesin 3	protein-coding	35.84	3.4	10.54117647	1.88E-19
chr1-2255	chr1	24881609	24882889	+	20.5	1280	promoter-TSS (NM_001010980)	promoter-TSS (NM_001010980)	266	NR_109781	100506985	Hs.607088	NR_109781		LOC100506985	-	uncharacterized LOC100506985	ncRNA	20.48	2.43	8.427983539	2.25E-10
chr1-2269	chr1	26400249	26401509	+	19.2	1260	Intergenic	MIRb|SINE|MIR	-6754	NM_032588	84676	Hs.279709	NM_032588	ENSG00000158022	TRIM63	IRF|MURF1|MURF2|RNF28|SMRZ	tripartite motif containing 63	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr1-2278	chr1	30636048	30637356	+	23	1308	Intergenic	MLT2B2|LTR|ERVL	-126243	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	23.04	3.88	5.93814433	4.22E-09
chr1-2284	chr1	31177523	31180317	+	44.2	2794	Intergenic	LOR1a|LTR|ERV1	-12699	NR_034182	100129196	Hs.659751	NR_034182	ENSG00000186056	MATN1-AS1	-	MATN1 antisense RNA 1	ncRNA	44.17	6.8	6.495588235	8.79E-17
chr1-2287	chr1	31688061	31689061	+	17.3	1000	"intron (NM_024522, intron 1 of 6)"	"intron (NM_024522, intron 1 of 6)"	24173	NM_024522	79570	Hs.470259	NM_024522	ENSG00000084628	NKAIN1	FAM77C	Sodium/potassium transporting ATPase interacting 1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr1-2288	chr1	32134453	32136352	+	32.6	1899	"intron (NM_001856, intron 49 of 70)"	"intron (NM_001856, intron 49 of 70)"	-24564	NR_033686	553115	Hs.470417	NM_012392	ENSG00000162517	PEF1	ABP32|PEF1A	penta-EF-hand domain containing 1	protein-coding	32.64	6.31	5.17274168	1.20E-10
chr1-2292	chr1	32201305	32202305	+	17.9	1000	"intron (NM_001294336, intron 22 of 31)"	MIR3|SINE|MIR	22531	NR_036216	100423028		NR_036216	ENSG00000266580	MIR4254	-	microRNA 4254	ncRNA	17.92	2.43	7.374485597	1.53E-08
chr1-2294	chr1	32907880	32908880	+	16.6	1000	Intergenic	AluSc8|SINE|Alu	-22278	NM_001145720	728116	Hs.647658	NM_001145720	ENSG00000273274	ZBTB8B	ZNF916B	zinc finger and BTB domain containing 8B	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-2295	chr1	32965262	32968402	+	55	3140	Intergenic	L1MC4|LINE|L1	36174	NM_001145720	728116	Hs.647658	NM_001145720	ENSG00000273274	ZBTB8B	ZNF916B	zinc finger and BTB domain containing 8B	protein-coding	55.05	6.8	8.095588235	1.39E-24
chr1-2296	chr1	33206068	33209613	+	68.5	3545	"intron (NM_020888, intron 1 of 6)"	CpG	328	NM_020888	57648	Hs.591502	NM_020888	ENSG00000162522	KIAA1522	-	KIAA1522	protein-coding	68.49	8.25	8.301818182	3.28E-30
chr1-2298	chr1	34038008	34039692	+	26.2	1684	"intron (NM_001281956, intron 49 of 70)"	"intron (NM_001281956, intron 49 of 70)"	100618	NM_145238	7579	Hs.442705	NM_145238	ENSG00000121903	ZSCAN20	KOX29|ZFP-31|ZNF31|ZNF360	zinc finger and SCAN domain containing 20	protein-coding	26.24	4.37	6.004576659	7.40E-10
chr1-2302	chr1	35221930	35222930	+	17.9	1000	"intron (NM_005268, intron 1 of 1)"	"intron (NM_005268, intron 1 of 1)"	1782	NM_005268	2709	Hs.198249	NM_005268	ENSG00000189280	GJB5	CX31.1	gap junction protein beta 5	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr1-2306	chr1	37158232	37159232	+	17.9	1000	Intergenic	Intergenic	-209817	NM_156039	1441	Hs.524517	NM_000760	ENSG00000119535	CSF3R	CD114|GCSFR|SCN7	colony stimulating factor 3 receptor	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr1-2307	chr1	37171044	37172305	+	19.2	1261	Intergenic	L2|LINE|L2	-222759	NM_156039	1441	Hs.524517	NM_000760	ENSG00000119535	CSF3R	CD114|GCSFR|SCN7	colony stimulating factor 3 receptor	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr1-2310	chr1	37315495	37321550	+	90.3	6055	"intron (NM_000831, intron 8 of 15)"	"intron (NM_000831, intron 8 of 15)"	181322	NM_000831	2899	Hs.128848	NM_000831	ENSG00000163873	GRIK3	EAA5|GLR7|GLUR7|GluK3|GluR7a	glutamate ionotropic receptor kainate type subunit 3	protein-coding	90.25	14.56	6.198489011	9.40E-32
chr1-2312	chr1	37332531	37333531	+	17.9	1000	"intron (NM_000831, intron 5 of 15)"	"intron (NM_000831, intron 5 of 15)"	166813	NM_000831	2899	Hs.128848	NM_000831	ENSG00000163873	GRIK3	EAA5|GLR7|GLUR7|GluK3|GluR7a	glutamate ionotropic receptor kainate type subunit 3	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr1-2313	chr1	37566768	37568047	+	21.1	1279	Intergenic	Intergenic	-59757	NR_036217	100422898		NR_036217	ENSG00000264698	MIR4255	-	microRNA 4255	ncRNA	21.12	0.49	43.10204082	5.97E-21
chr1-2316	chr1	37873535	37874535	+	17.9	1000	Intergenic	Intergenic	66009	NR_038842	728431	Hs.380738	NR_038842	ENSG00000233621	LINC01137	-	long intergenic non-protein coding RNA 1137	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr1-2318	chr1	38130655	38134315	+	58.2	3660	Intergenic	MIRb|SINE|MIR	23782	NM_017850	54955	Hs.272673	NM_017850	ENSG00000116922	C1orf109	-	chromosome 1 open reading frame 109	protein-coding	58.25	10.68	5.45411985	6.95E-19
chr1-2324	chr1	38770934	38772560	+	26.2	1626	Intergenic	L1ME3C|LINE|L1	-91308	NR_038928	339442	Hs.434245	NR_038928	ENSG00000237290	LINC01343	-	long intergenic non-protein coding RNA 1343	ncRNA	26.24	4.85	5.410309278	4.26E-09
chr1-2328	chr1	39191571	39192571	+	17.3	1000	Intergenic	Intergenic	133424	NM_022157	64121	Hs.532461	NM_022157	ENSG00000116954	RRAGC	GTR2|RAGC|TIB929	Ras related GTP binding C	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr1-2336	chr1	43518577	43519577	+	16.6	1000	Intergenic	Intergenic	-94230	NM_006516	6513	Hs.473721	NM_006516	ENSG00000117394	SLC2A1	CSE|DYT17|DYT18|DYT9|EIG12|GLUT|GLUT-1|GLUT1|GLUT1DS|HTLVR|PED|SDCHCN	solute carrier family 2 member 1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr1-2338	chr1	44520121	44522699	+	39	2578	Intergenic	MER66-int|LTR|ERV1	-24246	NM_001328630	6536	Hs.442590	NM_006934	ENSG00000196517	SLC6A9	GLYT1	solute carrier family 6 member 9	protein-coding	39.04	7.77	5.024453024	3.34E-12
chr1-2344	chr1	44878534	44884284	+	112.7	5750	"intron (NM_001319956, intron 2 of 14)"	"intron (NM_001319956, intron 2 of 14)"	-8087	NM_001319957	55182	Hs.456557	NM_018150	ENSG00000187147	RNF220	C1orf164	ring finger protein 220	protein-coding	112.65	23.78	4.737174096	2.74E-31
chr1-2348	chr1	45058036	45060727	+	45.4	2691	"intron (NM_001319957, intron 1 of 13)"	AluJo|SINE|Alu	48216	NR_049849	100847089		NR_049849	ENSG00000263381	MIR5584	-	microRNA 5584	ncRNA	45.45	7.77	5.849420849	6.82E-16
chr1-2350	chr1	45541064	45542064	+	17.9	1000	"intron (NM_020883, intron 2 of 13)"	L1MA2|LINE|L1	63759	NR_036510	7389	Hs.78601	NM_000374	ENSG00000126088	UROD	PCT|UPD	uroporphyrinogen decarboxylase	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr1-2355	chr1	47003862	47004862	+	16.6	1000	promoter-TSS (NR_038403)	promoter-TSS (NR_038403)	-6	NR_038403	100507423	Hs.601863	NR_038403	ENSG00000269956	MKNK1-AS1	-	MKNK1 antisense RNA 1	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr1-2369	chr1	53983762	53985242	+	25.6	1480	"intron (NM_147193, intron 6 of 9)"	"intron (NM_147193, intron 6 of 9)"	59430	NM_033067	63948	Hs.131654	NM_033067	ENSG00000143006	DMRTB1	-	DMRT like family B with proline rich C-terminal 1	protein-coding	25.6	4.85	5.278350515	4.26E-09
chr1-2372	chr1	54125404	54126985	+	22.4	1581	"intron (NM_147193, intron 1 of 9)"	"intron (NM_147193, intron 1 of 9)"	73683	NM_147193	148979	Hs.306691	NM_147193	ENSG00000174332	GLIS1	-	GLIS family zinc finger 1	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr1-2373	chr1	54137734	54139053	+	20.5	1319	"intron (NM_147193, intron 1 of 9)"	"intron (NM_147193, intron 1 of 9)"	61484	NM_147193	148979	Hs.306691	NM_147193	ENSG00000174332	GLIS1	-	GLIS family zinc finger 1	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr1-2374	chr1	54166171	54167171	+	16.6	1000	"intron (NM_147193, intron 1 of 9)"	L1MB7|LINE|L1	33206	NM_147193	148979	Hs.306691	NM_147193	ENSG00000174332	GLIS1	-	GLIS family zinc finger 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-2384	chr1	63717441	63718441	+	17.9	1000	"intron (NR_038252, intron 4 of 11)"	"intron (NR_038252, intron 4 of 11)"	64987	NR_038252	199899	Hs.116210	NR_038252	ENSG00000224209	LINC00466	-	long intergenic non-protein coding RNA 466	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr1-2385	chr1	64186903	64187903	+	17.9	1000	Intergenic	Intergenic	-52287	NM_005012	4919	Hs.128753	NM_005012	ENSG00000185483	ROR1	NTRKR1|dJ537F10.1	receptor tyrosine kinase like orphan receptor 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr1-2389	chr1	64271005	64272005	+	17.3	1000	"intron (NM_001083592, intron 1 of 6)"	AluJr|SINE|Alu	31815	NM_001083592	4919	Hs.128753	NM_005012	ENSG00000185483	ROR1	NTRKR1|dJ537F10.1	receptor tyrosine kinase like orphan receptor 1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr1-2390	chr1	64656764	64657764	+	17.9	1000	Intergenic	HERVL18-int|LTR|ERVL	-12037	NM_152489	148581	Hs.388746	NM_152489	ENSG00000177414	UBE2U	-	ubiquitin conjugating enzyme E2 U (putative)	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr1-2392	chr1	64751114	64752114	+	16.6	1000	Intergenic	L1MA8|LINE|L1	82313	NM_152489	148581	Hs.388746	NM_152489	ENSG00000177414	UBE2U	-	ubiquitin conjugating enzyme E2 U (putative)	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-2393	chr1	64897093	64898093	+	17.3	1000	Intergenic	Intergenic	-38883	NM_020925	57685	Hs.443891	NM_020925	ENSG00000158966	CACHD1	-	cache domain containing 1	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-2394	chr1	64977707	64979035	+	24.3	1328	"intron (NM_001293274, intron 1 of 25)"	"intron (NM_001293274, intron 1 of 25)"	6774	NM_001293274	57685	Hs.443891	NM_020925	ENSG00000158966	CACHD1	-	cache domain containing 1	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr1-2398	chr1	65029143	65030143	+	16.6	1000	"intron (NM_001293274, intron 2 of 25)"	"intron (NM_001293274, intron 2 of 25)"	-15887	NR_039957	100616338		NR_039957	ENSG00000264470	MIR4794	-	microRNA 4794	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr1-2399	chr1	65571439	65572439	+	16	1000	Intergenic	Intergenic	-38510	NM_001321852	3716	Hs.207538	NM_002227	ENSG00000162434	JAK1	JAK1A|JAK1B|JTK3	Janus kinase 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr1-2400	chr1	65724095	65725095	+	16.6	1000	Intergenic	L1M5|LINE|L1	-5782	NM_001256865	9829	Hs.647643	NM_014787	ENSG00000116675	DNAJC6	DJC6|PARK19	DnaJ heat shock protein family (Hsp40) member C6	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr1-2401	chr1	65851713	65852713	+	17.3	1000	"intron (NM_001256864, intron 7 of 18)"	"intron (NM_001256864, intron 7 of 18)"	-33918	NM_001198683	54741	Hs.23581	NM_017526	ENSG00000213625	LEPROT	LEPR|OB-RGRP|OBRGRP|VPS55	leptin receptor overlapping transcript	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr1-2404	chr1	87643955	87644955	+	16.6	1000	Intergenic	Intergenic	-33897	NM_001290053	101927844	Hs.694591	NM_001290053		LOC101927844	-	uncharacterized LOC101927844	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-2407	chr1	90748725	90749725	+	17.9	1000	Intergenic	Intergenic	288571	NM_182976	284695	Hs.306221	NM_181781	ENSG00000162664	ZNF326	ZAN75|ZIRD|Zfp326|dJ871E2.1	zinc finger protein 326	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr1-241	chr1	154780436	154782461	+	44.2	2025	"intron (NM_002249, intron 2 of 7)"	"intron (NM_002249, intron 2 of 7)"	50890	NM_170782	3782	Hs.490765	NM_002249	ENSG00000143603	KCNN3	KCa2.3|SK3|SKCA3|hSK3	potassium calcium-activated channel subfamily N member 3	protein-coding	44.17	7.77	5.684684685	3.96E-15
chr1-2415	chr1	109656137	109658190	+	35.8	2053	promoter-TSS (NM_001122961)	promoter-TSS (NM_001122961)	578	NM_001267048	57535	Hs.708190	NM_020775	ENSG00000116299	KIAA1324	EIG121	KIAA1324	protein-coding	35.84	4.85	7.389690722	1.37E-15
chr1-2421	chr1	110977808	110979671	+	32	1863	Intergenic	Intergenic	-15049	NM_032414	84432	Hs.514793	NM_032414	ENSG00000143125	PROK1	EGVEGF|PK1|PRK1	prokineticin 1	protein-coding	32	4.85	6.597938144	5.03E-13
chr1-2425	chr1	111216123	111218452	+	37.1	2329	"exon (NM_002232, exon 1 of 1)"	"exon (NM_002232, exon 1 of 1)"	368	NM_002232	3738	Hs.169948	NM_002232	ENSG00000177272	KCNA3	HGK5|HLK3|HPCN3|HUKIII|KV1.3|MK3|PCN3	potassium voltage-gated channel subfamily A member 3	protein-coding	37.12	5.82	6.378006873	1.70E-14
chr1-2426	chr1	112041283	112042579	+	22.4	1296	TTS (NM_000677)	TTS (NM_000677)	4812	NM_001302679	140	Hs.281342	NM_000677	ENSG00000282608	ADORA3	A3AR	adenosine A3 receptor	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr1-2427	chr1	112078918	112079918	+	16	1000	"intron (NM_001081976, intron 1 of 5)"	"intron (NM_001081976, intron 1 of 5)"	27207	NM_001081976	57413	Hs.281342	NM_020683	ENSG00000121933	TMIGD3	AD026	transmembrane and immunoglobulin domain containing 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-243	chr1	161691310	161692833	+	38.4	1523	promoter-TSS (NM_001320241)	promoter-TSS (NM_001320241)	24	NM_001320241	127943	Hs.517422	NM_001002901	ENSG00000162746	FCRLB	FCRL2|FCRLM2|FCRLY|FREB-2|FREB2|FcRY	Fc receptor like B	protein-coding	38.4	6.8	5.647058824	1.26E-13
chr1-2432	chr1	112381520	112382520	+	16.6	1000	"intron (NM_004980, intron 2 of 7)"	"intron (NM_004980, intron 2 of 7)"	17507	NR_046783	100874295	Hs.738190	NR_046783	ENSG00000232558	KCND3-IT1	-	KCND3 intronic transcript 1	ncRNA	16.64	1.46	11.39726027	2.99E-10
chr1-2440	chr1	115738582	115739582	+	17.3	1000	Intergenic	Intergenic	-106961	NM_001308315	10100	Hs.310458	NM_005725	ENSG00000134198	TSPAN2	NET3|TSN2|TSPAN-2	tetraspanin 2	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr1-2443	chr1	116780575	116781894	+	20.5	1319	Intergenic	Intergenic	126858	NM_152367	126868	Hs.376194	NM_152367	ENSG00000173212	MAB21L3	C1orf161	mab-21 like 3	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr1-2444	chr1	116797165	116798165	+	16.6	1000	Intergenic	Intergenic	-118130	NM_000701	476	Hs.371889	NM_000701	ENSG00000163399	ATP1A1	-	ATPase Na+/K+ transporting subunit alpha 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-2453	chr1	119909456	119910456	+	17.9	1000	Intergenic	MIR|SINE|MIR	-1443	NM_016527	51179	Hs.659767	NM_016527	ENSG00000116882	HAO2	GIG16|HAOX2	hydroxyacid oxidase 2	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr1-2477	chr1	145554965	145555965	+	16	1000	"intron (NM_144698, intron 1 of 13)"	"intron (NM_144698, intron 1 of 13)"	6256	NM_144698	148741	Hs.710624	NM_144698	ENSG00000198483	ANKRD35	-	ankyrin repeat domain 35	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-2479	chr1	147201998	147202998	+	17.3	1000	Intergenic	L1MA4A|LINE|L1	30216	NM_181703	2702	Hs.447968	NM_005266	ENSG00000265107	GJA5	ATFB11|CX40	gap junction protein alpha 5	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-2480	chr1	147238001	147239001	+	17.9	1000	"intron (NM_005266, intron 1 of 1)"	"intron (NM_005266, intron 1 of 1)"	-5787	NM_181703	2702	Hs.447968	NM_005266	ENSG00000265107	GJA5	ATFB11|CX40	gap junction protein alpha 5	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr1-2484	chr1	151713484	151714484	+	17.9	1000	Intergenic	LTR36|LTR|ERV1	19971	NM_001144956	284485	Hs.297967	NM_001144956	ENSG00000178796	RIIAD1	C1orf230|NCRNA00166	regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr1-2485	chr1	152418329	152419329	+	17.9	1000	Intergenic	Intergenic	-32079	NM_016190	49860	Hs.242057	NM_016190	ENSG00000143536	CRNN	C1orf10|DRC1|PDRC1|SEP53	cornulin	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr1-2490	chr1	153649288	153652939	+	64	3651	promoter-TSS (NM_000906)	promoter-TSS (NM_000906)	-51	NM_000906	4881	Hs.490330	NM_000906	ENSG00000169418	NPR1	ANPRA|ANPa|GUC2A|GUCY2A|NPRA	natriuretic peptide receptor 1	protein-coding	64.01	7.77	8.238095238	1.21E-28
chr1-2495	chr1	154655783	154656783	+	16	1000	Intergenic	MER5B|DNA|hAT-Charlie	-55827	NM_001025107	103	Hs.12341	NM_001111	ENSG00000160710	ADAR	ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136	"adenosine deaminase, RNA specific"	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-2496	chr1	154793554	154794554	+	16	1000	"intron (NM_002249, intron 2 of 7)"	"intron (NM_002249, intron 2 of 7)"	38284	NM_170782	3782	Hs.490765	NM_002249	ENSG00000143603	KCNN3	KCa2.3|SK3|SKCA3|hSK3	potassium calcium-activated channel subfamily N member 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-2497	chr1	155001570	155002570	+	16.6	1000	"intron (NM_144622, intron 7 of 14)"	"intron (NM_144622, intron 7 of 14)"	4187	NM_144622	127579	Hs.591491	NM_144622	ENSG00000163354	DCST2	-	DC-STAMP domain containing 2	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr1-2499	chr1	155020521	155022101	+	26.2	1580	"intron (NM_152494, intron 16 of 16)"	"intron (NM_152494, intron 16 of 16)"	2330	NR_040772	100505666	Hs.657533	NR_040772		DCST1-AS1	-	DCST1 antisense RNA 1	ncRNA	26.24	4.85	5.410309278	4.26E-09
chr1-2509	chr1	156674023	156675675	+	26.9	1652	"intron (NM_001878, intron 1 of 3)"	"intron (NM_001878, intron 1 of 3)"	610	NM_001878	1382	Hs.405662	NM_001878	ENSG00000143320	CRABP2	CRABP-II|RBP6	cellular retinoic acid binding protein 2	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr1-2510	chr1	156872642	156873642	+	16.6	1000	"intron (NM_001080471, intron 1 of 22)"	L3|LINE|CR1	9619	NM_001080471	375033	Hs.142003	NM_207369	ENSG00000187800	PEAR1	JEDI|MEGF12	platelet endothelial aggregation receptor 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-2519	chr1	160375617	160378446	+	45.4	2829	"intron (NM_020335, intron 1 of 7)"	"intron (NM_020335, intron 1 of 7)"	6667	NM_020335	57216	Hs.99477	NM_020335	ENSG00000162738	VANGL2	LPP1|LTAP|STB1|STBM|STBM1	VANGL planar cell polarity protein 2	protein-coding	45.45	5.82	7.809278351	1.25E-19
chr1-2522	chr1	160874793	160875793	+	17.3	1000	Intergenic	Intergenic	-20333	NM_017625	55600	Hs.50813	NM_017625	ENSG00000179914	ITLN1	HL-1|HL1|INTL|ITLN|LFR|hIntL|omentin	intelectin 1	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-2523	chr1	161056146	161057598	+	23	1452	"intron (NM_030916, intron 1 of 8)"	MIR3|SINE|MIR	2513	NM_030916	81607	Hs.492490	NM_030916	ENSG00000143217	NECTIN4	EDSS1|LNIR|PRR4|PVRL4|nectin-4	nectin cell adhesion molecule 4	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr1-2524	chr1	161469669	161470669	+	17.9	1000	Intergenic	Intergenic	-5036	NM_021642	2212	Hs.352642	NM_021642	ENSG00000143226	FCGR2A	CD32|CD32A|CDw32|FCG2|FCGR2|FCGR2A1|FcGR|IGFR2	Fc fragment of IgG receptor IIa	protein-coding	17.92	0	18.4597065	9.96E-18
chr1-2525	chr1	161680284	161681675	+	21.8	1391	"intron (NM_001184873, intron 2 of 2)"	"intron (NM_001184873, intron 2 of 2)"	4217	NM_001184867	84824	Hs.266331	NM_032738	ENSG00000132185	FCRLA	FCRL|FCRL1|FCRLM1|FCRLX|FCRLb|FCRLc1|FCRLc2|FCRLd|FCRLe|FCRX|FREB	Fc receptor like A	protein-coding	21.76	3.4	6.4	3.73E-09
chr1-2531	chr1	165089396	165090396	+	17.3	1000	Intergenic	Intergenic	235582	NM_001174069	4009	Hs.667312	NM_177398	ENSG00000162761	LMX1A	LMX1|LMX1.1	LIM homeobox transcription factor 1 alpha	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr1-2533	chr1	166017653	166018653	+	17.9	1000	Intergenic	Intergenic	105882	NR_030626	100126349		NR_030626	ENSG00000215952	MIR921	MIRN921|hsa-mir-921	microRNA 921	ncRNA	17.92	0.97	18.4742268	1.12E-13
chr1-2537	chr1	170165709	170166709	+	17.3	1000	Intergenic	Intergenic	-45606	NR_036064	100422839		NR_036064	ENSG00000283340	MIR3119-1	-	microRNA 3119-1	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr1-2538	chr1	170637553	170638944	+	25.6	1391	"intron (NM_006902, intron 1 of 4)"	"intron (NM_006902, intron 1 of 4)"	4935	NM_022716	5396	Hs.283416	NM_006902	ENSG00000116132	PRRX1	AGOTC|PHOX1|PMX1|PRX-1|PRX1	paired related homeobox 1	protein-coding	25.6	4.37	5.85812357	7.40E-10
chr1-2550	chr1	182084835	182085835	+	16.6	1000	Intergenic	Intergenic	-54488	NM_001009992	127665	Hs.684328	NM_001009992	ENSG00000179930	ZNF648	-	zinc finger protein 648	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr1-2551	chr1	182098776	182100087	+	19.2	1311	Intergenic	Intergenic	-68584	NM_001009992	127665	Hs.684328	NM_001009992	ENSG00000179930	ZNF648	-	zinc finger protein 648	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr1-2555	chr1	184943230	184944924	+	29.4	1694	promoter-TSS (NM_052966)	promoter-TSS (NM_052966)	-359	NM_052966	116496	Hs.518662	NM_052966	ENSG00000135842	FAM129A	C1orf24|GIG39|NIBAN	family with sequence similarity 129 member A	protein-coding	29.44	4.85	6.070103093	2.13E-11
chr1-2559	chr1	199884672	199885924	+	19.2	1252	Intergenic	Intergenic	-111432	NM_003822	2494	Hs.33446	NM_003822	ENSG00000116833	NR5A2	B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2	nuclear receptor subfamily 5 group A member 2	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr1-2564	chr1	201091729	201094918	+	54.4	3189	Intergenic	Intergenic	-8823	NM_001270601	647219	Hs.143949	NM_001270601	ENSG00000232237	ASCL5	bHLHa47	achaete-scute family bHLH transcription factor 5	protein-coding	54.41	12.13	4.48557296	7.36E-15
chr1-2565	chr1	201156986	201158901	+	29.4	1915	Intergenic	LTR84b|LTR|ERVL	-2010	NM_001164586	91156	Hs.519024	NM_178275	ENSG00000163395	IGFN1	EEF1A2BP1	immunoglobulin-like and fibronectin type III domain containing 1	protein-coding	29.44	5.82	5.058419244	6.85E-10
chr1-2566	chr1	201186095	201188592	+	47.4	2497	"intron (NM_001164586, intron 17 of 23)"	"intron (NM_001164586, intron 17 of 23)"	27390	NM_001164586	91156	Hs.519024	NM_178275	ENSG00000163395	IGFN1	EEF1A2BP1	immunoglobulin-like and fibronectin type III domain containing 1	protein-coding	47.37	7.77	6.096525097	1.86E-17
chr1-2567	chr1	201235748	201236748	+	17.9	1000	Intergenic	Intergenic	-16332	NM_001005337	5317	Hs.497350	NM_000299	ENSG00000081277	PKP1	B6P	plakophilin 1	protein-coding	17.92	1.46	12.2739726	2.41E-11
chr1-2568	chr1	201509997	201510997	+	16.6	1000	Intergenic	Intergenic	21465	NR_026667	376693	Hs.605989	NR_026667		RPS10P7	RPS10_2_147	ribosomal protein S10 pseudogene 7	pseudo	16.64	2.91	5.718213058	8.60E-07
chr1-2574	chr1	202956297	202957297	+	16.6	1000	"intron (NR_036557, intron 4 of 4)"	"intron (NR_036557, intron 4 of 4)"	19596	NR_036557	100506747	Hs.642024	NR_036557		LOC100506747	-	"alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein LOC641515 homolog"	pseudo	16.64	1.94	8.577319588	8.87E-09
chr1-2575	chr1	203015372	203016372	+	17.3	1000	"intron (NM_001304331, intron 9 of 29)"	"intron (NM_001304331, intron 9 of 29)"	20223	NM_001304331	8497	Hs.153648	NM_015053	ENSG00000143847	PPFIA4	-	PTPRF interacting protein alpha 4	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr1-2580	chr1	203346428	203349963	+	51.2	3535	Intergenic	Intergenic	-27638	NR_103757	2331	Hs.519168	NM_002023	ENSG00000122176	FMOD	FM|SLRR2E	fibromodulin	protein-coding	51.21	12.13	4.221764221	1.43E-13
chr1-2582	chr1	204307136	204309028	+	32.6	1892	"intron (NM_014935, intron 1 of 22)"	MLT1H1|LTR|ERVL-MaLR	20975	NM_014935	22874	Hs.253146	NM_014935	ENSG00000143850	PLEKHA6	PEPP-3|PEPP3	pleckstrin homology domain containing A6	protein-coding	32.64	4.85	6.729896907	5.03E-13
chr1-2589	chr1	204782163	204783163	+	16.6	1000	Intergenic	Intergenic	-15119	NM_015090	23114	Hs.13349	NM_015090	ENSG00000163531	NFASC	NF|NRCAML	neurofascin	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-2593	chr1	205212973	205213973	+	16.6	1000	"intron (NM_014858, intron 2 of 4)"	L2c|LINE|L2	-2151	NM_001297611	9911	Hs.6360	NM_014858	ENSG00000133069	TMCC2	HUCEP11	transmembrane and coiled-coil domain family 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-2594	chr1	205302591	205304193	+	23.7	1602	Intergenic	AluSp|SINE|Alu	-12473	NM_030952	81788	Hs.497512	NM_030952	ENSG00000163545	NUAK2	SNARK	NUAK family kinase 2	protein-coding	23.68	5.82	4.068728522	1.51E-06
chr1-2595	chr1	205340430	205341988	+	25	1558	Intergenic	MIR3|SINE|MIR	-1171	NR_038425	284576	Hs.585440	NR_038425	ENSG00000226235	LEMD1-AS1	-	LEMD1 antisense RNA 1	ncRNA	24.96	4.37	5.711670481	4.38E-09
chr1-2599	chr1	206201212	206202464	+	17.9	1252	Intergenic	L1MA1|LINE|L1	-22445	NM_000707	553	Hs.1372	NM_000707	ENSG00000198049	AVPR1B	AVPR3	arginine vasopressin receptor 1B	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr1-2603	chr1	208085314	208086314	+	16	1000	Intergenic	Intergenic	-1131	NM_001773	947	Hs.374990	NM_001773	ENSG00000174059	CD34	-	CD34 molecule	protein-coding	16	0.97	16.49484536	3.54E-11
chr1-2609	chr1	208398010	208399766	+	30.1	1756	"intron (NM_025179, intron 1 of 31)"	AluJb|SINE|Alu	18777	NM_025179	5362	Hs.497626	NM_025179	ENSG00000076356	PLXNA2	OCT|PLXN2	plexin A2	protein-coding	30.08	2.91	10.33676976	7.13E-16
chr1-2611	chr1	208421419	208425660	+	58.9	4241	Intergenic	MIRb|SINE|MIR	-5874	NM_025179	5362	Hs.497626	NM_025179	ENSG00000076356	PLXNA2	OCT|PLXN2	plexin A2	protein-coding	58.89	13.11	4.491990847	2.44E-16
chr1-2616	chr1	210432507	210436433	+	51.2	3926	Intergenic	Intergenic	-27004	NR_024337	574036	Hs.446946	NR_024337	ENSG00000203706	SERTAD4-AS1	C1orf133	SERTAD4 antisense RNA 1	ncRNA	51.21	9.71	5.273944387	1.19E-16
chr1-2617	chr1	210566241	210567241	+	16.6	1000	"intron (NM_001170564, intron 4 of 9)"	L2c|LINE|L2	64101	NM_001170580	55733	Hs.58650	NM_018194	ENSG00000054392	HHAT	MART2|SKI1|Skn	hedgehog acyltransferase	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-2618	chr1	212779296	212781660	+	49.9	2364	"intron (NM_001030287, intron 1 of 3)"	CpG	-1492	NM_001674	467	Hs.460	NM_001674	ENSG00000162772	ATF3	-	activating transcription factor 3	protein-coding	49.93	5.82	8.579037801	2.68E-23
chr1-262	chr1	94702350	94703887	+	32.6	1537	"5' UTR (NM_001328666, exon 1 of 23)"	"5' UTR (NM_001328666, exon 1 of 23)"	189	NM_004815	9411	Hs.483238	NM_004815	ENSG00000137962	ARHGAP29	PARG1	Rho GTPase activating protein 29	protein-coding	32.64	4.85	6.729896907	5.03E-13
chr1-2621	chr1	215852337	215853337	+	17.3	1000	"intron (NM_206933, intron 62 of 71)"	"intron (NM_206933, intron 62 of 71)"	112115	NM_016121	51133	Hs.335139	NM_016121	ENSG00000136636	KCTD3	NY-REN-45	potassium channel tetramerization domain containing 3	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr1-2623	chr1	223285545	223286545	+	16	1000	"exon (NM_003268, exon 6 of 6)"	"exon (NM_003268, exon 6 of 6)"	30579	NM_003268	7100	Hs.604542	NM_003268	ENSG00000187554	TLR5	MELIOS|SLE1|SLEB1|TIL3	toll like receptor 5	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-2627	chr1	226684943	226686420	+	23.7	1477	Intergenic	Intergenic	-50820	NM_001003665	375057	Hs.116827	NM_001003665	ENSG00000203685	STUM	C1orf95	"stum, mechanosensory transduction mediator homolog"	protein-coding	23.68	5.82	4.068728522	1.51E-06
chr1-2632	chr1	230963631	230964631	+	17.9	1000	Intergenic	MER33|DNA|hAT-Charlie	27651	NM_001136495	84886	Hs.520494	NM_032800	ENSG00000119280	C1orf198	-	chromosome 1 open reading frame 198	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr1-2634	chr1	231562599	231563599	+	17.9	1000	Intergenic	L1MC5|LINE|L1	-2309	NM_022051	54583	Hs.444450	NM_022051	ENSG00000135766	EGLN1	C1orf12|ECYT3|HALAH|HIF-PH2|HIFPH2|HPH-2|HPH2|PHD2|SM20|ZMYND6	egl-9 family hypoxia inducible factor 1	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr1-2638	chr1	235811857	235812857	+	17.3	1000	"intron (NM_001098721, intron 1 of 3)"	CpG	936	NM_001098722	2786	Hs.159711	NM_004485	ENSG00000168243	GNG4	-	G protein subunit gamma 4	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-2640	chr1	245452484	245453484	+	16.6	1000	"intron (NM_018012, intron 2 of 14)"	"intron (NM_018012, intron 2 of 14)"	134697	NM_018012	55083	Hs.143134	NM_018012	ENSG00000162849	KIF26B	-	kinesin family member 26B	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-2641	chr1	245564850	245565850	+	16.6	1000	"intron (NM_018012, intron 3 of 14)"	"intron (NM_018012, intron 3 of 14)"	247063	NM_018012	55083	Hs.143134	NM_018012	ENSG00000162849	KIF26B	-	kinesin family member 26B	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-2642	chr1	247589158	247590635	+	23.7	1477	"intron (NM_001127462, intron 3 of 7)"	"intron (NM_001127462, intron 3 of 7)"	8545	NM_001243133	114548	Hs.159483	NM_004895	ENSG00000162711	NLRP3	AGTAVPRL|AII|AVP|C1orf7|CIAS1|CLR1.1|FCAS|FCAS1|FCU|MWS|NALP3|PYPAF1	NLR family pyrin domain containing 3	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr1-2648	chr1	2032748	2033748	+	15.4	1000	"intron (NM_001242874, intron 1 of 14)"	"intron (NM_001242874, intron 1 of 14)"	-2907	NM_001033582	5590	Hs.496255	NM_002744	ENSG00000067606	PRKCZ	PKC-ZETA|PKC2	protein kinase C zeta	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-2649	chr1	2045708	2049175	+	58.2	3467	"intron (NM_001033582, intron 1 of 14)"	MER21C|LTR|ERVL	11286	NM_001033582	5590	Hs.496255	NM_002744	ENSG00000067606	PRKCZ	PKC-ZETA|PKC2	protein kinase C zeta	protein-coding	58.25	10.68	5.45411985	6.95E-19
chr1-2650	chr1	2059109	2060374	+	22.4	1265	"intron (NM_001033582, intron 1 of 14)"	"intron (NM_001033582, intron 1 of 14)"	23586	NM_001033582	5590	Hs.496255	NM_002744	ENSG00000067606	PRKCZ	PKC-ZETA|PKC2	protein kinase C zeta	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr1-2652	chr1	2069199	2070808	+	27.5	1609	"intron (NM_001033581, intron 2 of 14)"	"intron (NM_001033581, intron 2 of 14)"	33848	NM_001033582	5590	Hs.496255	NM_002744	ENSG00000067606	PRKCZ	PKC-ZETA|PKC2	protein kinase C zeta	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr1-2653	chr1	2260440	2263256	+	37.8	2816	"intron (NM_024848, intron 12 of 13)"	"intron (NM_024848, intron 12 of 13)"	22252	NR_024489	100129534	Hs.655313	NM_001127577	ENSG00000269896	LOC100129534	-	small nuclear ribonucleoprotein polypeptide N pseudogene	pseudo	37.76	6.8	5.552941176	7.17E-13
chr1-2655	chr1	2357630	2358630	+	16.6	1000	Intergenic	Intergenic	-14120	NM_153818	5192	Hs.732228	NM_002617	ENSG00000157911	PEX10	NALD|PBD6A|PBD6B|RNF69	peroxisomal biogenesis factor 10	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-2656	chr1	2408818	2409818	+	17.3	1000	"intron (NM_001303013, intron 1 of 21)"	"intron (NM_001303013, intron 1 of 21)"	1564	NM_014638	9651	Hs.170156	NM_014638	ENSG00000149527	PLCH2	PLC-L4|PLC-eta2|PLCL4|PLCeta2	phospholipase C eta 2	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr1-2662	chr1	2885137	2887711	+	38.4	2574	Intergenic	Intergenic	-51622	NM_080431	140625	Hs.236635	NM_080431	ENSG00000169717	ACTRT2	ARPM2|ARPT2|Arp-T2|HARPM2	actin related protein T2	protein-coding	38.4	5.34	7.191011236	2.72E-16
chr1-2663	chr1	3048054	3052444	+	72.3	4390	"intron (NM_199454, intron 1 of 16)"	"intron (NM_199454, intron 1 of 16)"	5710	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	72.33	12.13	5.962901896	6.44E-25
chr1-2666	chr1	3086996	3088362	+	22.4	1366	"intron (NM_199454, intron 1 of 16)"	"intron (NM_199454, intron 1 of 16)"	43140	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	22.4	3.4	6.588235294	3.73E-09
chr1-2667	chr1	3155867	3157178	+	21.1	1311	"intron (NM_199454, intron 2 of 16)"	A-rich|Low_complexity|Low_complexity	111983	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	21.12	2.43	8.691358025	2.25E-10
chr1-2668	chr1	3161625	3162625	+	17.3	1000	"intron (NM_199454, intron 3 of 16)"	"intron (NM_199454, intron 3 of 16)"	117586	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr1-2669	chr1	3272893	3273893	+	16.6	1000	"intron (NM_199454, intron 3 of 16)"	"intron (NM_199454, intron 3 of 16)"	-97754	NM_014448	27237	Hs.87435	NM_014448	ENSG00000130762	ARHGEF16	GEF16|NBR	Rho guanine nucleotide exchange factor 16	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr1-2672	chr1	3379043	3380043	+	16	1000	"intron (NM_014448, intron 1 of 14)"	"intron (NM_014448, intron 1 of 14)"	8396	NM_014448	27237	Hs.87435	NM_014448	ENSG00000130762	ARHGEF16	GEF16|NBR	Rho guanine nucleotide exchange factor 16	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-2673	chr1	3587392	3588392	+	14.1	1000	"intron (NM_005427, intron 1 of 13)"	"intron (NM_005427, intron 1 of 13)"	18763	NM_001204184	7161	Hs.192132	NM_005427	ENSG00000078900	TP73	P73	tumor protein p73	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr1-2675	chr1	4165520	4166811	+	20.5	1291	Intergenic	MIR|SINE|MIR	165493	NR_040065	728716	Hs.668359	NR_040065		LINC01346	-	long intergenic non-protein coding RNA 1346	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr1-2676	chr1	4663189	4664189	+	16.6	1000	Intergenic	MER54B|LTR|ERVL	-51416	NM_001042478	55966	Hs.12473	NM_018836	ENSG00000196581	AJAP1	MOT8|SHREW-1|SHREW1	adherens junctions associated protein 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-2686	chr1	7939263	7940263	+	17.3	1000	Intergenic	AluSz6|SINE|Alu	-26212	NM_021995	10911	Hs.715862	NM_006786	ENSG00000049247	UTS2	PRO1068|U-II|UCN2|UII	urotensin 2	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-2687	chr1	8096502	8097502	+	16.6	1000	Intergenic	L2a|LINE|L2	-10609	NM_018948	54206	Hs.605445	NM_018948	ENSG00000116285	ERRFI1	GENE-33|MIG-6|MIG6|RALT	ERBB receptor feedback inhibitor 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-2691	chr1	9086859	9088562	+	27.5	1703	Intergenic	Intergenic	-1306	NM_207420	155184	Hs.531239	NM_207420	ENSG00000197241	SLC2A7	GLUT7	solute carrier family 2 member 7	protein-coding	27.52	0.97	28.37113402	2.75E-23
chr1-2695	chr1	9262017	9263908	+	32	1891	Intergenic	Intergenic	-20565	NR_132742	106614088	Hs.551837	NR_132742	ENSG00000228526	MIR34AHG	-	MIR34A host gene	ncRNA	32	5.82	5.498281787	2.32E-11
chr1-2697	chr1	10772339	10773339	+	16.6	1000	"intron (NM_017766, intron 2 of 15)"	"intron (NM_017766, intron 2 of 15)"	83894	NM_001079843	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr1-2699	chr1	10797222	10798488	+	21.8	1266	"intron (NM_017766, intron 2 of 15)"	"intron (NM_017766, intron 2 of 15)"	58878	NM_001079843	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	21.76	2.43	8.95473251	2.49E-11
chr1-27	chr1	145022158	145023158	+	41	1000	"intron (NM_022359, intron 1 of 6)"	"intron (NM_022359, intron 1 of 6)"	17305	NR_144517	100996724	Hs.682380	NR_144516		LOC100996724	-	phosphodiesterase 4D interacting protein-like	pseudo	40.97	10.19	4.02060844	1.19E-10
chr1-2701	chr1	10845442	10851280	+	90.3	5838	"intron (NM_017766, intron 1 of 15)"	"intron (NM_017766, intron 1 of 15)"	8372	NM_001079843	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	90.25	12.62	7.151347068	1.86E-35
chr1-2702	chr1	10854418	10857864	+	63.4	3446	"intron (NM_017766, intron 1 of 15)"	CpG	592	NM_001079843	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	63.37	7.77	8.155727156	1.00E-27
chr1-2705	chr1	10881283	10884345	+	53.8	3062	Intergenic	MIR3|SINE|MIR	-26081	NM_017766	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	53.77	10.68	5.034644195	1.03E-16
chr1-2712	chr1	11765587	11766587	+	16	1000	"intron (NM_198545, intron 1 of 6)"	MER20|DNA|hAT-Charlie	14306	NM_198545	374946	Hs.632364	NM_198545	ENSG00000162490	DRAXIN	AGPA3119|C1orf187|UNQ3119|neucrin	dorsal inhibitory axon guidance protein	protein-coding	16	1.46	10.95890411	3.44E-09
chr1-2715	chr1	12837142	12838142	+	17.3	1000	"exon (NM_001080830, exon 3 of 3)"	"exon (NM_001080830, exon 3 of 3)"	2651	NM_001080830	390999	Hs.156406	NM_001080830	ENSG00000116726	PRAMEF12	-	PRAME family member 12	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr1-2716	chr1	13911008	13913758	+	44.8	2750	"intron (NM_001006625, intron 1 of 5)"	"intron (NM_001006625, intron 1 of 5)"	416	NM_001006625	10630	Hs.468675	NM_006474	ENSG00000162493	PDPN	AGGRUS|GP36|GP40|Gp38|HT1A-1|OTS8|PA2.26|T1A|T1A-2|T1A2|TI1A	podoplanin	protein-coding	44.81	6.31	7.101426307	1.43E-18
chr1-2727	chr1	16125374	16128542	+	42.2	3168	Intergenic	Intergenic	7236	NM_001089591	440567	Hs.568229	NM_001089591	ENSG00000233954	UQCRHL	-	ubiquinol-cytochrome c reductase hinge protein like	protein-coding	42.25	5.82	7.259450172	7.27E-18
chr1-2730	chr1	16387780	16389187	+	23	1407	"intron (NM_182623, intron 4 of 6)"	"intron (NM_182623, intron 4 of 6)"	11644	NM_182623	348487	Hs.126825	NM_182623	ENSG00000185519	FAM131C	C1orf117	family with sequence similarity 131 member C	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr1-2731	chr1	16435198	16436479	+	19.8	1281	Intergenic	AluJo|SINE|Alu	-35711	NM_182623	348487	Hs.126825	NM_182623	ENSG00000185519	FAM131C	C1orf117	family with sequence similarity 131 member C	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr1-2738	chr1	17106077	17107077	+	17.3	1000	Intergenic	Intergenic	-15602	NM_001271733	11223	Hs.349110	NM_001271733		MST1L	BRF-1|D1F15S1A|MSPL-7|MSPL7|MST1P9|MSTP7|MSTP9	macrophage stimulating 1 like	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr1-2739	chr1	17120851	17123684	+	37.8	2833	Intergenic	Zaphod3|DNA|hAT-Tip100	-31292	NM_001271733	11223	Hs.349110	NM_001271733		MST1L	BRF-1|D1F15S1A|MSPL-7|MSPL7|MST1P9|MSTP7|MSTP9	macrophage stimulating 1 like	protein-coding	37.76	5.82	6.487972509	1.70E-14
chr1-2743	chr1	17908614	17909614	+	17.3	1000	"intron (NM_001319837, intron 1 of 25)"	L2b|LINE|L2	2066	NM_001011722	55160	Hs.443460	NM_018125	ENSG00000074964	ARHGEF10L	GrinchGEF	Rho guanine nucleotide exchange factor 10 like	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-2744	chr1	17924205	17926534	+	36.5	2329	"intron (NM_001319837, intron 3 of 25)"	"intron (NM_001319837, intron 3 of 25)"	18321	NM_001011722	55160	Hs.443460	NM_018125	ENSG00000074964	ARHGEF10L	GrinchGEF	Rho guanine nucleotide exchange factor 10 like	protein-coding	36.48	6.8	5.364705882	3.95E-12
chr1-2749	chr1	19134844	19137678	+	38.4	2834	Intergenic	Intergenic	49894	NM_152232	80834	Hs.553548	NM_152232	ENSG00000179002	TAS1R2	GPR71|T1R2|TR2	taste 1 receptor member 2	protein-coding	38.4	5.82	6.597938144	2.56E-15
chr1-2754	chr1	19990871	19993403	+	39.7	2532	"5' UTR (NM_000871, exon 1 of 3)"	"5' UTR (NM_000871, exon 1 of 3)"	357	NM_000871	3362	Hs.22180	NM_000871	ENSG00000158748	HTR6	5-HT6|5-HT6R	5-hydroxytryptamine receptor 6	protein-coding	39.69	4.37	9.082379863	1.50E-19
chr1-2760	chr1	21840147	21841147	+	16.6	1000	"intron (NM_001127501, intron 1 of 10)"	"intron (NM_001127501, intron 1 of 10)"	4796	NM_001177520	249	Hs.75431	NM_000478	ENSG00000162551	ALPL	AP-TNAP|APTNAP|HOPS|TNAP|TNSALP	"alkaline phosphatase, liver/bone/kidney"	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-2763	chr1	22577762	22579775	+	37.1	2013	Intergenic	MIRb|SINE|MIR	-13964	NR_039613	100616433		NR_039613	ENSG00000266564	MIR4418	-	microRNA 4418	ncRNA	37.12	4.85	7.653608247	1.78E-16
chr1-2769	chr1	23538116	23539116	+	17.3	1000	Intergenic	L2c|LINE|L2	-17394	NM_000864	3352	Hs.121482	NM_000864	ENSG00000179546	HTR1D	5-HT1D|HT1DA|HTR1DA|HTRL|RDC4	5-hydroxytryptamine receptor 1D	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr1-2770	chr1	23797523	23798523	+	16.6	1000	"intron (NM_017707, intron 1 of 24)"	"intron (NM_017707, intron 1 of 24)"	12727	NM_017707	55616	Hs.437379	NM_017707	ENSG00000088280	ASAP3	ACAP4|CENTB6|DDEFL1|UPLC1	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 3"	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr1-2771	chr1	23972916	23973916	+	17.3	1000	Intergenic	Intergenic	19592	NR_027042	259283	Hs.523369	NM_001348075	ENSG00000197880	MDS2	-	myelodysplastic syndrome 2 translocation associated	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr1-2772	chr1	24397799	24398799	+	16.6	1000	"intron (NM_152372, intron 24 of 36)"	"intron (NM_152372, intron 24 of 36)"	40366	NM_152372	127294	Hs.523413	NM_152372	ENSG00000142661	MYOM3	-	myomesin 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-2773	chr1	24412929	24414503	+	26.9	1574	"intron (NM_152372, intron 14 of 36)"	L2a|LINE|L2	24949	NM_152372	127294	Hs.523413	NM_152372	ENSG00000142661	MYOM3	-	myomesin 3	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr1-2776	chr1	24423115	24424115	+	17.3	1000	"intron (NM_152372, intron 7 of 36)"	"intron (NM_152372, intron 7 of 36)"	15050	NM_152372	127294	Hs.523413	NM_152372	ENSG00000142661	MYOM3	-	myomesin 3	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-2779	chr1	24645947	24647454	+	25	1507	"intron (NM_001195010, intron 1 of 15)"	MIR|SINE|MIR	644	NM_001195010	57822	Hs.657920	NM_021180	ENSG00000158055	GRHL3	SOM|TFCP2L4|VWS2	grainyhead like transcription factor 3	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr1-2784	chr1	25864469	25865469	+	16	1000	Intergenic	Intergenic	-5107	NM_015627	26119	Hs.590911	NM_015627	ENSG00000157978	LDLRAP1	ARH|ARH1|ARH2|FHCB1|FHCB2	low density lipoprotein receptor adaptor protein 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-2795	chr1	26474793	26477481	+	46.7	2688	Intergenic	AluSx|SINE|Alu	-9374	NM_024869	79927	Hs.694119	NM_024869	ENSG00000197245	FAM110D	GRRP1	family with sequence similarity 110 member D	protein-coding	46.73	7.77	6.014157014	1.14E-16
chr1-2796	chr1	26512601	26513949	+	19.8	1348	"intron (NM_001297648, intron 14 of 20)"	AluJb|SINE|Alu	-3844	NM_198137	378807	Hs.123532	NM_198137	ENSG00000188782	CATSPER4	-	cation channel sperm associated 4	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr1-2801	chr1	29560966	29566805	+	88.3	5839	"intron (NM_133177, intron 1 of 30)"	CpG	857	NM_001195001	10076	Hs.19718	NM_005704	ENSG00000060656	PTPRU	FMI|PCP-2|PTP|PTP-J|PTP-PI|PTP-RO|PTPPSI|PTPRO|PTPU2|R-PTP-PSI|R-PTP-U|hPTP-J	"protein tyrosine phosphatase, receptor type U"	protein-coding	88.33	18.93	4.666138405	1.48E-24
chr1-2804	chr1	30894746	30898884	+	58.2	4138	Intergenic	Intergenic	-294804	NR_034182	100129196	Hs.659751	NR_034182	ENSG00000186056	MATN1-AS1	-	MATN1 antisense RNA 1	ncRNA	58.25	10.19	5.716388616	1.24E-19
chr1-2808	chr1	31282738	31283993	+	19.8	1255	Intergenic	Intergenic	-52682	NM_006762	7805	Hs.371021	NM_006762	ENSG00000162511	LAPTM5	CLAST6	lysosomal protein transmembrane 5	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr1-2809	chr1	31287914	31289494	+	23.7	1580	Intergenic	Intergenic	-58021	NM_006762	7805	Hs.371021	NM_006762	ENSG00000162511	LAPTM5	CLAST6	lysosomal protein transmembrane 5	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr1-2816	chr1	32146971	32148825	+	30.7	1854	"intron (NM_001856, intron 37 of 70)"	Charlie19a|DNA|hAT-Charlie	21870	NM_001856	1307	Hs.368921	NM_001856	ENSG00000084636	COL16A1	447AA|FP1572	collagen type XVI alpha 1 chain	protein-coding	30.72	3.4	9.035294118	1.89E-15
chr1-2819	chr1	32178977	32184078	+	69.8	5101	Intergenic	Intergenic	-11759	NM_001856	1307	Hs.368921	NM_001856	ENSG00000084636	COL16A1	447AA|FP1572	collagen type XVI alpha 1 chain	protein-coding	69.77	13.59	5.133922001	3.32E-21
chr1-2822	chr1	33388875	33391190	+	34.6	2315	Intergenic	HERVS71-int|LTR|ERV1	-22991	NM_001329723	113452	Hs.534521	NM_033504	ENSG00000121900	TMEM54	BCLP|CAC-1|CAC1	transmembrane protein 54	protein-coding	34.56	4.85	7.125773196	1.02E-14
chr1-2829	chr1	34245530	34248011	+	33.3	2481	"intron (NM_001281956, intron 12 of 70)"	"intron (NM_001281956, intron 12 of 70)"	-79306	NM_145205	127540	Hs.568628	NM_145205	ENSG00000176256	HMGB4	dJ1007G16.5	high mobility group box 4	protein-coding	33.28	5.34	6.232209738	6.04E-13
chr1-2831	chr1	34621119	34622381	+	16.6	1262	"intron (NM_052896, intron 1 of 69)"	"intron (NM_052896, intron 1 of 69)"	9125	NM_001281956	114784	Hs.656915	NM_052896	ENSG00000121904	CSMD2	dJ1007G16.1|dJ1007G16.2|dJ947L8.1	CUB and Sushi multiple domains 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-2832	chr1	34785634	34786634	+	16	1000	Intergenic	MLT1H|LTR|ERVL-MaLR	143581	NM_001134734	84970	Hs.194610	NM_032884	ENSG00000142698	C1orf94	-	chromosome 1 open reading frame 94	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-2835	chr1	34937017	34938017	+	16.6	1000	Intergenic	L3|LINE|CR1	197778	NR_030278	693137		NR_030278	ENSG00000207941	MIR552	MIRN552|hsa-mir-552	microRNA 552	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr1-2837	chr1	36549059	36550353	+	19.8	1294	promoter-TSS (NM_014466)	promoter-TSS (NM_014466)	30	NM_014466	27285	Hs.127111	NM_014466	ENSG00000092850	TEKT2	TEKTB1|TEKTIN-T|h-tektin-t	tektin 2	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr1-2849	chr1	37417781	37418781	+	17.3	1000	"intron (NM_000831, intron 1 of 15)"	L2a|LINE|L2	81563	NM_000831	2899	Hs.128848	NM_000831	ENSG00000163873	GRIK3	EAA5|GLR7|GLUR7|GluK3|GluR7a	glutamate ionotropic receptor kainate type subunit 3	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr1-2850	chr1	37456562	37457562	+	17.3	1000	"intron (NM_000831, intron 1 of 15)"	"intron (NM_000831, intron 1 of 15)"	42782	NM_000831	2899	Hs.128848	NM_000831	ENSG00000163873	GRIK3	EAA5|GLR7|GLUR7|GluK3|GluR7a	glutamate ionotropic receptor kainate type subunit 3	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-2851	chr1	37505855	37506855	+	16	1000	Intergenic	Intergenic	-6511	NM_000831	2899	Hs.128848	NM_000831	ENSG00000163873	GRIK3	EAA5|GLR7|GLUR7|GluK3|GluR7a	glutamate ionotropic receptor kainate type subunit 3	protein-coding	16	0.49	32.65306122	1.26E-14
chr1-2853	chr1	37879984	37880984	+	16	1000	Intergenic	Intergenic	59560	NR_038842	728431	Hs.380738	NR_038842	ENSG00000233621	LINC01137	-	long intergenic non-protein coding RNA 1137	ncRNA	16	2.91	5.498281787	4.98E-06
chr1-2856	chr1	38910815	38912486	+	24.3	1671	Intergenic	Intergenic	-231211	NR_038928	339442	Hs.434245	NR_038928	ENSG00000237290	LINC01343	-	long intergenic non-protein coding RNA 1343	ncRNA	24.32	2.91	8.357388316	5.77E-12
chr1-2858	chr1	38999723	39000723	+	16	1000	Intergenic	Intergenic	-319784	NR_038928	339442	Hs.434245	NR_038928	ENSG00000237290	LINC01343	-	long intergenic non-protein coding RNA 1343	ncRNA	16	3.4	4.705882353	2.25E-05
chr1-2859	chr1	39022387	39023387	+	17.3	1000	Intergenic	Intergenic	302608	NM_022157	64121	Hs.532461	NM_022157	ENSG00000116954	RRAGC	GTR2|RAGC|TIB929	Ras related GTP binding C	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr1-2860	chr1	39135869	39136869	+	17.3	1000	Intergenic	Intergenic	189126	NM_022157	64121	Hs.532461	NM_022157	ENSG00000116954	RRAGC	GTR2|RAGC|TIB929	Ras related GTP binding C	protein-coding	17.28	1.46	11.83561644	2.99E-10
chr1-2861	chr1	39548096	39549096	+	16.6	1000	Intergenic	Intergenic	-1243	NM_012090	23499	Hs.472475	NM_012090	ENSG00000127603	MACF1	ABP620|ACF7|MACF|OFC4	microtubule-actin crosslinking factor 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-2862	chr1	40175751	40176751	+	16.6	1000	Intergenic	AluJb|SINE|Alu	-18869	NM_016257	51440	Hs.743975	NM_016257	ENSG00000116983	HPCAL4	HLP4	hippocalcin like 4	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr1-2863	chr1	41894263	41895263	+	16.6	1000	Intergenic	Intergenic	-53422	NR_135817	101929901		NR_135817	ENSG00000229901	LOC101929901	-	uncharacterized LOC101929901	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr1-2864	chr1	41901450	41902450	+	16	1000	Intergenic	Intergenic	48404	NM_001302269	1907	Hs.1407	NM_001956	ENSG00000127129	EDN2	ET-2|ET2|PPET2	endothelin 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-2865	chr1	42592095	42593095	+	16.6	1000	Intergenic	L2b|LINE|L2	-26497	NM_007102	2981	Hs.32966	NM_007102	ENSG00000044012	GUCA2B	GCAP-II|UGN	guanylate cyclase activator 2B	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-2871	chr1	44835379	44836379	+	16	1000	Intergenic	(CATA)n|Simple_repeat|Simple_repeat	-14928	NM_001301699	79033	Hs.731413	NM_024066	ENSG00000117419	ERI3	PINT1|PRNPIP	ERI1 exoribonuclease family member 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-2875	chr1	44978853	44980979	+	35.8	2126	"intron (NM_001319957, intron 1 of 13)"	L2a|LINE|L2	-31249	NR_049849	100847089		NR_049849	ENSG00000263381	MIR5584	-	microRNA 5584	ncRNA	35.84	7.28	4.923076923	1.89E-11
chr1-2877	chr1	45015458	45016458	+	15.4	1000	"intron (NM_001319957, intron 1 of 13)"	"intron (NM_001319957, intron 1 of 13)"	4793	NR_049849	100847089		NR_049849	ENSG00000263381	MIR5584	-	microRNA 5584	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr1-2880	chr1	45089216	45090216	+	16.6	1000	"intron (NM_001319956, intron 4 of 14)"	"intron (NM_001319956, intron 4 of 14)"	50564	NM_024587	79639	Hs.22157	NM_024587	ENSG00000126106	TMEM53	NET4	transmembrane protein 53	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr1-2885	chr1	46988905	46990211	+	24.3	1306	Intergenic	L3|LINE|CR1	-14810	NR_038403	100507423	Hs.601863	NR_038403	ENSG00000269956	MKNK1-AS1	-	MKNK1 antisense RNA 1	ncRNA	24.32	4.37	5.565217391	4.38E-09
chr1-2888	chr1	47500793	47501793	+	16.6	1000	"intron (NM_178033, intron 4 of 11)"	"intron (NM_178033, intron 4 of 11)"	12053	NM_178033	260293	Hs.439760	NM_178033	ENSG00000186377	CYP4X1	CYPIVX1	cytochrome P450 family 4 subfamily X member 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-2891	chr1	47997150	47999605	+	36.5	2455	Intergenic	Intergenic	-95388	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA	36.48	5.82	6.268041237	1.09E-13
chr1-2893	chr1	48082151	48084210	+	34.6	2059	Intergenic	L2b|LINE|L2	-180191	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA	34.56	4.85	7.125773196	1.02E-14
chr1-2894	chr1	48178845	48179845	+	17.3	1000	Intergenic	Intergenic	-276356	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr1-2896	chr1	48307565	48310677	+	48	3112	"intron (NM_001194986, intron 2 of 6)"	L2a|LINE|L2	153441	NM_001194986	388630	Hs.61504	NM_001194986	ENSG00000269113	TRABD2B	TIKI2	TraB domain containing 2B	protein-coding	48.01	8.74	5.493135011	6.98E-16
chr1-2897	chr1	48318227	48319227	+	16	1000	"intron (NM_001194986, intron 2 of 6)"	"intron (NM_001194986, intron 2 of 6)"	143835	NM_001194986	388630	Hs.61504	NM_001194986	ENSG00000269113	TRABD2B	TIKI2	TraB domain containing 2B	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-2898	chr1	48705109	48706109	+	14.7	1000	"intron (NM_001135181, intron 13 of 14)"	L2c|LINE|L2	17252	NM_001011547	200010	Hs.37890	NM_001011547	ENSG00000117834	SLC5A9	SGLT4	solute carrier family 5 member 9	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr1-2905	chr1	55295238	55296238	+	16	1000	"intron (NM_001110533, intron 9 of 9)"	HAL1|LINE|L1	24002	NM_152607	163747	Hs.376018	NM_152607	ENSG00000162398	LEXM	C1orf177|LEM	lymphocyte expansion molecule	protein-coding	16	2.43	6.58436214	7.90E-07
chr1-2906	chr1	55474850	55475850	+	16.6	1000	TTS (NM_057176)	TTS (NM_057176)	10733	NM_057176	7809	Hs.151291	NM_057176	ENSG00000162399	BSND	BART|DFNB73	barttin CLCNK type accessory beta subunit	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr1-2907	chr1	55482707	55486615	+	60.8	3908	Intergenic	AluSz|SINE|Alu	20044	NM_057176	7809	Hs.151291	NM_057176	ENSG00000162399	BSND	BART|DFNB73	barttin CLCNK type accessory beta subunit	protein-coding	60.81	9.71	6.26261586	5.26E-22
chr1-2910	chr1	60392845	60394457	+	25	1612	Intergenic	Intergenic	-1181	NM_000775	1573	Hs.152096	NM_000775	ENSG00000134716	CYP2J2	CPJ2|CYPIIJ2	cytochrome P450 family 2 subfamily J member 2	protein-coding	24.96	5.34	4.674157303	9.72E-08
chr1-2911	chr1	60405136	60409534	+	53.1	4398	Intergenic	Tigger3b|DNA|TcMar-Tigger	-14865	NM_000775	1573	Hs.152096	NM_000775	ENSG00000134716	CYP2J2	CPJ2|CYPIIJ2	cytochrome P450 family 2 subfamily J member 2	protein-coding	53.13	12.62	4.209984152	1.13E-13
chr1-2913	chr1	61613794	61614794	+	17.3	1000	"intron (NM_001145511, intron 2 of 10)"	"intron (NM_001145511, intron 2 of 10)"	66314	NM_001134673	4774	Hs.740757	NM_005595	ENSG00000162599	NFIA	CTF|NF-I/A|NF1-A|NFI-A|NFI-L	nuclear factor I A	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-2914	chr1	62106440	62107440	+	16.6	1000	Intergenic	Intergenic	-12974	NR_073400	414927	Hs.123471	NR_073400		MGC34796	-	"sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) pseudogene"	pseudo	16.64	3.88	4.288659794	1.81E-05
chr1-2916	chr1	62280510	62281510	+	16	1000	"intron (NM_176877, intron 14 of 42)"	L2a|LINE|L2	72861	NM_176877	10207	Hs.478125	NM_005799	ENSG00000132849	PATJ	Cipp|INADL|InaD-like|hINADL	"PATJ, crumbs cell polarity complex component"	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-2918	chr1	63381584	63382584	+	16	1000	Intergenic	Intergenic	132307	NM_032852	84938	Hs.7353	NM_032852	ENSG00000125703	ATG4C	APG4-C|APG4C|AUTL1|AUTL3	autophagy related 4C cysteine peptidase	protein-coding	16	0.97	16.49484536	3.54E-11
chr1-2931	chr1	66696507	66697507	+	16.6	1000	"intron (NM_001037340, intron 1 of 14)"	"intron (NM_001037340, intron 1 of 14)"	-100784	NM_001037339	5142	Hs.198072	NM_002600	ENSG00000184588	PDE4B	DPDE4|PDEIVB	phosphodiesterase 4B	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-2933	chr1	67773258	67774258	+	16	1000	"intron (NM_001258215, intron 1 of 13)"	CpG	711	NM_001258215	3595	Hs.479347	NM_001559	ENSG00000081985	IL12RB2	-	interleukin 12 receptor subunit beta 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-2935	chr1	68105528	68106852	+	21.1	1324	Intergenic	L1MB3|LINE|L1	-44670	NM_001199741	1647	Hs.80409	NM_001924	ENSG00000116717	GADD45A	DDIT1|GADD45	growth arrest and DNA damage inducible alpha	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr1-2936	chr1	68222619	68223619	+	17.3	1000	"intron (NM_018841, intron 2 of 3)"	"intron (NM_018841, intron 2 of 3)"	72259	NM_001924	1647	Hs.80409	NM_001924	ENSG00000116717	GADD45A	DDIT1|GADD45	growth arrest and DNA damage inducible alpha	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr1-2937	chr1	68244515	68245867	+	19.8	1352	"intron (NM_018841, intron 1 of 3)"	"intron (NM_018841, intron 1 of 3)"	-52780	NR_040077	100289178	Hs.677603	NR_040077	ENSG00000232284	GNG12-AS1	-	GNG12 antisense RNA 1	ncRNA	19.84	4.37	4.540045767	3.16E-06
chr1-2939	chr1	68305622	68306622	+	17.3	1000	"intron (NR_040077, intron 1 of 9)"	"intron (NR_040077, intron 1 of 9)"	-6967	NM_018841	55970	Hs.431101	NM_018841	ENSG00000172380	GNG12	-	G protein subunit gamma 12	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr1-2940	chr1	68749994	68750994	+	17.3	1000	Intergenic	Intergenic	-52210	NM_024911	79971	Hs.647659	NM_024911	ENSG00000116729	WLS	C1orf139|EVI|GPR177|MRP|mig-14	wntless Wnt ligand secretion mediator	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr1-2944	chr1	86620648	86622124	+	23	1476	"intron (NM_152890, intron 1 of 59)"	CpG	735	NM_152890	255631	Hs.659516	NM_152890	ENSG00000171502	COL24A1	-	collagen type XXIV alpha 1 chain	protein-coding	23.04	4.37	5.272311213	2.46E-08
chr1-2948	chr1	89928074	89929074	+	16.6	1000	Intergenic	L1M5|LINE|L1	55336	NR_003133	400759	Hs.661968	NR_003133	ENSG00000225492	GBP1P1	-	guanylate binding protein 1 pseudogene 1	pseudo	16.64	3.88	4.288659794	1.81E-05
chr1-2959	chr1	94506099	94507099	+	17.3	1000	"intron (NM_000350, intron 23 of 49)"	"intron (NM_000350, intron 23 of 49)"	80106	NM_000350	24	Hs.416707	NM_000350	ENSG00000198691	ABCA4	ABC10|ABCR|ARMD2|CORD3|FFM|RMP|RP19|STGD|STGD1	ATP binding cassette subfamily A member 4	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-2961	chr1	95331564	95332564	+	17.3	1000	"intron (NM_001258340, intron 11 of 14)"	"intron (NM_001258340, intron 11 of 14)"	45964	NM_152369	126969	Hs.483423	NM_152369	ENSG00000143036	SLC44A3	CTL3	solute carrier family 44 member 3	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr1-2969	chr1	110309566	110311745	+	34.6	2179	Intergenic	Intergenic	-4011	NM_024526	79574	Hs.485352	NM_024526	ENSG00000198758	EPS8L3	EPS8R3	EPS8 like 3	protein-coding	34.56	7.77	4.447876448	3.74E-10
chr1-2972	chr1	110724483	110725483	+	17.3	1000	"intron (NM_001010898, intron 6 of 11)"	L2a|LINE|L2	27626	NR_046546	100873974	Hs.130515	NR_046546		KCNC4-AS1	-	KCNC4 antisense RNA 1 (head to head)	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr1-2973	chr1	110728200	110734791	+	90.9	6591	"intron (NM_001010898, intron 6 of 11)"	L2c|LINE|L2	21114	NR_046546	100873974	Hs.130515	NR_046546		KCNC4-AS1	-	KCNC4 antisense RNA 1 (head to head)	ncRNA	90.89	15.53	5.852543464	6.96E-31
chr1-2974	chr1	110737623	110738623	+	15.4	1000	"intron (NM_001010898, intron 9 of 11)"	"intron (NM_001010898, intron 9 of 11)"	14486	NR_046546	100873974	Hs.130515	NR_046546		KCNC4-AS1	-	KCNC4 antisense RNA 1 (head to head)	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr1-2981	chr1	111122045	111123298	+	20.5	1253	Intergenic	Intergenic	26304	NM_004974	3737	Hs.248139	NM_004974	ENSG00000177301	KCNA2	EIEE32|HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2	potassium voltage-gated channel subfamily A member 2	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr1-2984	chr1	112061383	112062733	+	24.3	1350	"intron (NM_001081976, intron 1 of 5)"	"intron (NM_001081976, intron 1 of 5)"	-15315	NM_001302678	140	Hs.281342	NM_000677	ENSG00000282608	ADORA3	A3AR	adenosine A3 receptor	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr1-2985	chr1	112102358	112103358	+	17.3	1000	"intron (NM_001081976, intron 1 of 5)"	"intron (NM_001081976, intron 1 of 5)"	3767	NM_001081976	57413	Hs.281342	NM_020683	ENSG00000121933	TMIGD3	AD026	transmembrane and immunoglobulin domain containing 3	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr1-2988	chr1	112281822	112284268	+	39	2446	promoter-TSS (NM_019099)	promoter-TSS (NM_019099)	582	NR_038951	100506343	Hs.485810	NR_038951	ENSG00000227811	FAM212B-AS1	-	FAM212B antisense RNA 1	ncRNA	39.04	7.77	5.024453024	3.34E-12
chr1-2997	chr1	115632509	115633509	+	17.3	1000	promoter-TSS (NM_001308316)	promoter-TSS (NM_001308316)	-888	NM_001308315	10100	Hs.310458	NM_005725	ENSG00000134198	TSPAN2	NET3|TSN2|TSPAN-2	tetraspanin 2	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-2999	chr1	116703430	116704729	+	21.1	1299	Intergenic	Intergenic	49703	NM_152367	126868	Hs.376194	NM_152367	ENSG00000173212	MAB21L3	C1orf161	mab-21 like 3	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr1-3001	chr1	116983323	116984323	+	16	1000	"intron (NR_125972, intron 2 of 3)"	L1MDa|LINE|L1	-22579	NR_027646	84852	Hs.664752	NM_032766	ENSG00000203865	ATP1A1-AS1	ATP1A1OS|C1orf203	ATP1A1 antisense RNA 1	ncRNA	16	0.97	16.49484536	3.54E-11
chr1-3030	chr1	146551178	146552549	+	21.8	1371	Intergenic	Intergenic	4440	NR_121645	101447996		NR_121645		RNVU1-8	RNU1-145|vU1.8	"RNA, variant U1 small nuclear 8"	snRNA	21.76	1.94	11.21649485	8.00E-13
chr1-3032	chr1	147186321	147187713	+	23.7	1392	Intergenic	L2a|LINE|L2	-44352	NM_001323625	51205	Hs.562154	NM_016361	ENSG00000162836	ACP6	ACPL1|LPAP|PACPL1	"acid phosphatase 6, lysophosphatidic"	protein-coding	23.68	5.82	4.068728522	1.51E-06
chr1-3036	chr1	151976176	151977176	+	16.6	1000	Intergenic	Intergenic	-9962	NM_002966	6281	Hs.143873	NM_002966	ENSG00000197747	S100A10	42C|ANX2L|ANX2LG|CAL1L|CLP11|Ca[1]|GP11|P11|p10	S100 calcium binding protein A10	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr1-3039	chr1	153332362	153334065	+	26.9	1703	"exon (NM_002965, exon 3 of 3)"	"exon (NM_002965, exon 3 of 3)"	2883	NM_002965	6280	Hs.112405	NM_002965	ENSG00000163220	S100A9	60B8AG|CAGB|CFAG|CGLB|L1AG|LIAG|MAC387|MIF|MRP14|NIF|P14	S100 calcium binding protein A9	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr1-3051	chr1	156078953	156079953	+	14.7	1000	"intron (NM_001282625, intron 3 of 12)"	MIR|SINE|MIR	-5008	NM_170707	4000	Hs.594444	NM_005572	ENSG00000160789	LMNA	CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1	lamin A/C	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-3053	chr1	156092281	156093538	+	20.5	1257	"intron (NM_001282625, intron 4 of 12)"	"intron (NM_001282625, intron 4 of 12)"	-2999	NM_001282624	4000	Hs.594444	NM_005572	ENSG00000160789	LMNA	CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1	lamin A/C	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr1-3056	chr1	156359140	156360412	+	21.8	1272	Intergenic	Intergenic	20796	NR_046115	57127	Hs.131835	NM_020407	ENSG00000132677	RHBG	SLC42A2	Rh family B glycoprotein (gene/pseudogene)	protein-coding	21.76	1.46	14.90410959	8.59E-15
chr1-3060	chr1	156398483	156399483	+	16.6	1000	"intron (NM_006365, intron 1 of 6)"	"intron (NM_006365, intron 1 of 6)"	357	NR_135262	10485	Hs.380027	NM_006365	ENSG00000125462	C1orf61	CROC4	chromosome 1 open reading frame 61	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-3069	chr1	157158331	157159331	+	16.6	1000	Intergenic	L2a|LINE|L2	-50448	NM_001145312	2117	Hs.105636	NM_005240	ENSG00000117036	ETV3	METS|PE-1|PE1|bA110J1.4	ETS variant 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-3072	chr1	159159101	159160746	+	28.2	1645	"intron (NM_021189, intron 2 of 9)"	"intron (NM_021189, intron 2 of 9)"	12289	NR_037870	100131825	Hs.701271	NR_037870		CADM3-AS1	-	CADM3 antisense RNA 1	ncRNA	28.16	5.34	5.27340824	7.39E-10
chr1-3074	chr1	159163836	159165107	+	17.3	1271	"intron (NM_021189, intron 6 of 9)"	"intron (NM_021189, intron 6 of 9)"	7741	NR_037870	100131825	Hs.701271	NR_037870		CADM3-AS1	-	CADM3 antisense RNA 1	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr1-3079	chr1	159831286	159832286	+	16	1000	"intron (NM_001013661, intron 1 of 6)"	"intron (NM_001013661, intron 1 of 6)"	661	NM_001013661	391123	Hs.647718	NM_001013661	ENSG00000243284	VSIG8	-	V-set and immunoglobulin domain containing 8	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-3086	chr1	162126744	162127744	+	17.3	1000	TTS (NR_039798)	TTS (NR_039798)	347	NR_039798	100616386		NR_039798	ENSG00000266144	MIR4654	mir-4654	microRNA 4654	ncRNA	17.28	0.97	17.81443299	2.06E-12
chr1-3088	chr1	164634528	164635781	+	22.4	1253	"intron (NM_001204963, intron 2 of 8)"	MLT1N2|LTR|ERVL-MaLR	106557	NM_002585	5087	Hs.557097	NM_002585	ENSG00000185630	PBX1	-	PBX homeobox 1	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr1-3089	chr1	165267068	165268068	+	17.9	1000	"intron (NM_177398, intron 3 of 8)"	"intron (NM_177398, intron 3 of 8)"	57910	NM_001174069	4009	Hs.667312	NM_177398	ENSG00000162761	LMX1A	LMX1|LMX1.1	LIM homeobox transcription factor 1 alpha	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr1-3090	chr1	165409283	165410283	+	16	1000	"intron (NR_033824, intron 1 of 1)"	Tigger4a|DNA|TcMar-Tigger	4809	NM_001256570	6258	Hs.26550	NM_006917	ENSG00000143171	RXRG	NR2B3|RXRC	retinoid X receptor gamma	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-3091	chr1	165510831	165511831	+	17.3	1000	"intron (NR_026744, intron 3 of 6)"	"intron (NR_026744, intron 3 of 6)"	-2147	NM_001005214	440699	Hs.664975	NM_001005214	ENSG00000162763	LRRC52	-	leucine rich repeat containing 52	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr1-3093	chr1	166763433	166764692	+	19.8	1259	Intergenic	Intergenic	-44579	NM_001314014	57645	Hs.432752	NM_017542	ENSG00000143157	POGK	BASS2|KRBOX2|LST003	pogo transposable element with KRAB domain	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr1-3096	chr1	172464448	172465448	+	16.6	1000	Intergenic	Intergenic	-36541	NM_016227	51430	Hs.204559	NM_014283	ENSG00000094975	SUCO	C1orf9|CH1|OPT|SLP1	SUN domain containing ossification factor	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-3098	chr1	175605196	175606196	+	15.4	1000	"intron (NM_001328635, intron 1 of 22)"	"intron (NM_001328635, intron 1 of 22)"	107056	NM_003285	7143	Hs.659864	NM_003285	ENSG00000116147	TNR	TN-R	tenascin R	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-3102	chr1	181173232	181178052	+	71.7	4820	Intergenic	Intergenic	-29882	NR_046249	100287948	Hs.742594	NR_046249	ENSG00000179452	LINC01699	GM140	long intergenic non-protein coding RNA 1699	ncRNA	71.69	13.59	5.275202355	1.21E-22
chr1-3103	chr1	181188383	181189383	+	16	1000	Intergenic	Intergenic	-16641	NR_046249	100287948	Hs.742594	NR_046249	ENSG00000179452	LINC01699	GM140	long intergenic non-protein coding RNA 1699	ncRNA	16	2.91	5.498281787	4.98E-06
chr1-3106	chr1	182029408	182030692	+	19.8	1284	"intron (NM_001009992, intron 1 of 1)"	"intron (NM_001009992, intron 1 of 1)"	797	NM_001009992	127665	Hs.684328	NM_001009992	ENSG00000179930	ZNF648	-	zinc finger protein 648	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr1-3109	chr1	182580901	182581901	+	16.6	1000	Intergenic	MIR|SINE|MIR	-2874	NR_036490	284648	Hs.253475	NR_036490	ENSG00000261504	LINC01686	-	long intergenic non-protein coding RNA 1686	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr1-3113	chr1	183090011	183091629	+	26.9	1618	"intron (NM_002293, intron 11 of 27)"	"intron (NM_002293, intron 11 of 27)"	-64354	NM_005562	3918	Hs.591484	NM_005562	ENSG00000058085	LAMC2	B2T|BM600|CSF|EBR2|EBR2A|LAMB2T|LAMNB2	laminin subunit gamma 2	protein-coding	26.88	4.37	6.151029748	1.19E-10
chr1-3117	chr1	183253693	183254693	+	17.3	1000	"intron (NM_170706, intron 5 of 10)"	L1ME4a|LINE|L1	19816	NM_170706	23057	Hs.497123	NM_015039	ENSG00000157064	NMNAT2	C1orf15|PNAT2	nicotinamide nucleotide adenylyltransferase 2	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-3119	chr1	183336196	183337196	+	16	1000	"intron (NM_015039, intron 1 of 10)"	"intron (NM_015039, intron 1 of 10)"	50938	NM_015039	23057	Hs.497123	NM_015039	ENSG00000157064	NMNAT2	C1orf15|PNAT2	nicotinamide nucleotide adenylyltransferase 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-3124	chr1	201059594	201060594	+	16.6	1000	"intron (NM_000069, intron 5 of 43)"	Charlie1b|DNA|hAT-Charlie	21600	NM_000069	779	Hs.1294	NM_000069	ENSG00000081248	CACNA1S	CACNL1A3|CCHL1A3|Cav1.1|HOKPP|HOKPP1|MHS5|TTPP1|hypoPP	calcium voltage-gated channel subunit alpha1 S	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-3130	chr1	201450005	201451005	+	17.3	1000	Intergenic	Intergenic	-12206	NM_012396	23612	Hs.153944	NM_012396	ENSG00000174307	PHLDA3	TIH1	pleckstrin homology like domain family A member 3	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-3131	chr1	202162357	202164268	+	30.1	1911	"exon (NM_001017403, exon 1 of 18)"	"exon (NM_001017403, exon 1 of 18)"	194	NM_001017403	59352	Hs.497402	NM_021636	ENSG00000133067	LGR6	GPCR|VTS20631	leucine rich repeat containing G protein-coupled receptor 6	protein-coding	30.08	4.85	6.202061856	2.13E-11
chr1-3133	chr1	202633392	202634392	+	16.6	1000	"intron (NM_177402, intron 1 of 8)"	AluSx1|SINE|Alu	-21311	NM_001136504	127833	Hs.25422	NM_177402	ENSG00000143858	SYT2	CMS7|MYSPC|SytII	synaptotagmin 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-3141	chr1	203417055	203418055	+	17.3	1000	Intergenic	Intergenic	-27328	NM_002725	5549	Hs.632481	NM_002725	ENSG00000188783	PRELP	MST161|MSTP161|SLRR2A	proline and arginine rich end leucine rich repeat protein	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr1-3143	chr1	203458361	203459635	+	20.5	1274	"3' UTR (NM_002725, exon 3 of 3)"	"3' UTR (NM_002725, exon 3 of 3)"	-4273	NM_014359	26254	Hs.632468	NM_014359	ENSG00000188770	OPTC	OPT	opticin	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr1-3144	chr1	204063454	204064946	+	21.8	1492	"intron (NM_005686, intron 1 of 13)"	"intron (NM_005686, intron 1 of 13)"	21954	NM_005686	9580	Hs.201671	NM_005686	ENSG00000143842	SOX13	ICA12|Sox-13	SRY-box 13	protein-coding	21.76	0.97	22.43298969	1.19E-17
chr1-3146	chr1	204224687	204225687	+	16.6	1000	"intron (NM_014935, intron 9 of 22)"	"intron (NM_014935, intron 9 of 22)"	-41967	NM_198447	127845	Hs.532401	NM_198447	ENSG00000174567	GOLT1A	CGI-141|GOT1|HMFN1187|YMR292W|hGOT1b	golgi transport 1A	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-3152	chr1	204688092	204689092	+	16.6	1000	Intergenic	L1MC4|LINE|L1	-33995	NM_201630	10446	Hs.26312	NM_006338	ENSG00000170382	LRRN2	FIGLER7|GAC1|LRANK1|LRRN5	leucine rich repeat neuronal 2	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr1-3155	chr1	204999048	205002195	+	41	3147	Intergenic	Intergenic	-11444	NM_001346083	6900	Hs.519220	NM_005076	ENSG00000184144	CNTN2	AXT|FAME5|TAG-1|TAX|TAX1	contactin 2	protein-coding	40.97	5.34	7.672284644	4.72E-18
chr1-3159	chr1	205318974	205319974	+	16	1000	"intron (NM_001271863, intron 2 of 8)"	"intron (NM_001271863, intron 2 of 8)"	6654	NM_018203	55220	Hs.10414	NM_018203	ENSG00000162873	KLHDC8A	-	kelch domain containing 8A	protein-coding	16	0.97	16.49484536	3.54E-11
chr1-3163	chr1	205393641	205395653	+	30.1	2012	Intergenic	Intergenic	-3433	NM_001199051	93273	Hs.655520	NM_001001552	ENSG00000186007	LEMD1	CT50|LEMP-1	LEM domain containing 1	protein-coding	30.08	3.88	7.75257732	2.58E-13
chr1-3164	chr1	205432918	205433918	+	16.6	1000	Intergenic	L2a|LINE|L2	-8204	NR_103783	101669762	Hs.666219	NR_103783		BLACAT1	LINC00912|linc-UBC1|onco-lncRNA-30	bladder cancer associated transcript 1 (non-protein coding)	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr1-3165	chr1	205458954	205459954	+	15.4	1000	Intergenic	Intergenic	-14230	NM_212503	5129	Hs.445402	NM_002596	ENSG00000117266	CDK18	PCTAIRE|PCTAIRE3|PCTK3	cyclin dependent kinase 18	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-3172	chr1	207842124	207843491	+	23	1367	"intron (NM_175710, intron 1 of 11)"	CpG	24349	NM_175710	1379	Hs.628568	NM_175710	ENSG00000197721	CR1L	-	complement C3b/C4b receptor 1 like	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr1-3177	chr1	208333131	208334131	+	16	1000	"intron (NM_025179, intron 3 of 31)"	"intron (NM_025179, intron 3 of 31)"	84034	NM_025179	5362	Hs.497626	NM_025179	ENSG00000076356	PLXNA2	OCT|PLXN2	plexin A2	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-3178	chr1	208455579	208456579	+	17.3	1000	Intergenic	Intergenic	-38414	NM_025179	5362	Hs.497626	NM_025179	ENSG00000076356	PLXNA2	OCT|PLXN2	plexin A2	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr1-3179	chr1	209276598	209277598	+	17.3	1000	Intergenic	Intergenic	-221703	NR_135085	105372897	Hs.116154	NR_135085	ENSG00000227940	LINC01696	-	long intergenic non-protein coding RNA 1696	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr1-3182	chr1	211652623	211653623	+	17.3	1000	"intron (NM_183059, intron 2 of 2)"	"intron (NM_183059, intron 2 of 2)"	13136	NM_001164688	343035	Hs.632495	NM_183059	ENSG00000198570	RD3	C1orf36|LCA12	retinal degeneration 3	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr1-3183	chr1	220524036	220525383	+	21.1	1347	Intergenic	Intergenic	-78866	NM_012414	25782	Hs.654849	NM_012414	ENSG00000118873	RAB3GAP2	RAB3-GAP150|RAB3GAP150|SPG69|WARBM2|p150	RAB3 GTPase activating non-catalytic protein subunit 2	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr1-3189	chr1	224818507	224819862	+	17.9	1355	"intron (NR_136287, intron 1 of 4)"	T-rich|Low_complexity|Low_complexity	15005	NM_152495	149111	Hs.731723	NM_152495	ENSG00000143786	CNIH3	CNIH-3	cornichon family AMPA receptor auxiliary protein 3	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr1-3193	chr1	226778707	226780048	+	18.6	1341	"intron (NM_001003665, intron 1 of 3)"	"intron (NM_001003665, intron 1 of 3)"	42876	NM_001003665	375057	Hs.116827	NM_001003665	ENSG00000203685	STUM	C1orf95	"stum, mechanosensory transduction mediator homolog"	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr1-320	chr1	204326487	204328183	+	37.1	1696	"intron (NM_014935, intron 1 of 22)"	"intron (NM_014935, intron 1 of 22)"	1722	NM_014935	22874	Hs.253146	NM_014935	ENSG00000143850	PLEKHA6	PEPP-3|PEPP3	pleckstrin homology domain containing A6	protein-coding	37.12	4.85	7.653608247	1.78E-16
chr1-3205	chr1	234991900	234993629	+	26.2	1729	Intergenic	Intergenic	106982	NR_125945	101927851	Hs.520684	NR_125945	ENSG00000238005	LOC101927851	-	uncharacterized LOC101927851	ncRNA	26.24	5.82	4.508591065	7.99E-08
chr1-3206	chr1	235051881	235052881	+	14.7	1000	Intergenic	AluSx1|SINE|Alu	47365	NR_125945	101927851	Hs.520684	NR_125945	ENSG00000238005	LOC101927851	-	uncharacterized LOC101927851	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr1-3207	chr1	235055120	235056851	+	26.2	1731	Intergenic	Intergenic	43761	NR_125945	101927851	Hs.520684	NR_125945	ENSG00000238005	LOC101927851	-	uncharacterized LOC101927851	ncRNA	26.24	5.82	4.508591065	7.99E-08
chr1-3209	chr1	236047693	236048693	+	16.6	1000	Intergenic	AluJo|SINE|Alu	-1185	NM_001301365	1130	Hs.532411	NM_000081	ENSG00000143669	LYST	CHS|CHS1	lysosomal trafficking regulator	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-3210	chr1	236565473	236566956	+	19.2	1483	"intron (NM_080738, intron 1 of 5)"	"intron (NM_080738, intron 1 of 5)"	7498	NM_080738	128178	Hs.352224	NM_080738	ENSG00000186197	EDARADD	ECTD11A|ECTD11B|ED3|EDA3	EDAR associated death domain	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr1-3211	chr1	241700885	241701885	+	17.3	1000	"intron (NM_003679, intron 1 of 14)"	LTR31|LTR|ERV1	5951	NM_003679	8564	Hs.731056	NM_003679	ENSG00000117009	KMO	dJ317G22.1	kynurenine 3-monooxygenase	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-3213	chr1	245328853	245331763	+	47.4	2910	"intron (NM_018012, intron 2 of 14)"	"intron (NM_018012, intron 2 of 14)"	12021	NM_018012	55083	Hs.143134	NM_018012	ENSG00000162849	KIF26B	-	kinesin family member 26B	protein-coding	47.37	10.68	4.435393258	2.70E-13
chr1-3214	chr1	245582430	245583430	+	17.3	1000	"exon (NM_018012, exon 4 of 15)"	"exon (NM_018012, exon 4 of 15)"	264643	NM_018012	55083	Hs.143134	NM_018012	ENSG00000162849	KIF26B	-	kinesin family member 26B	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr1-3220	chr1	1006673	1010542	+	63.4	3869	"intron (NM_001205252, intron 1 of 1)"	"intron (NM_001205252, intron 1 of 1)"	1080	NM_001205252	401934	Hs.568137	NM_001205252	ENSG00000237330	RNF223	-	ring finger protein 223	protein-coding	63.37	4.85	13.06597938	9.24E-37
chr1-3225	chr1	1846722	1850012	+	38.4	3290	TTS (NM_178545)	TTS (NM_178545)	2101	NM_001330313	163688	Hs.85902	NM_138705	ENSG00000169885	CALML6	CAGLP	calmodulin like 6	protein-coding	38.4	5.82	6.597938144	2.56E-15
chr1-3239	chr1	2403836	2406800	+	48	2964	"intron (NM_001303012, intron 1 of 21)"	"intron (NM_001303012, intron 1 of 21)"	-2436	NM_001303013	9651	Hs.170156	NM_014638	ENSG00000149527	PLCH2	PLC-L4|PLC-eta2|PLCL4|PLCeta2	phospholipase C eta 2	protein-coding	48.01	6.8	7.060294118	2.78E-19
chr1-3240	chr1	2458940	2462582	+	59.5	3642	"3' UTR (NM_001010926, exon 3 of 3)"	"3' UTR (NM_001010926, exon 3 of 3)"	923	NM_001010926	388585	Hs.57971	NM_001010926	ENSG00000197921	HES5	bHLHb38	hes family bHLH transcription factor 5	protein-coding	59.53	11.16	5.334229391	6.70E-19
chr1-3249	chr1	2841195	2842195	+	16.6	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	-96351	NM_080431	140625	Hs.236635	NM_080431	ENSG00000169717	ACTRT2	ARPM2|ARPT2|Arp-T2|HARPM2	actin related protein T2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-3251	chr1	2864827	2866118	+	19.8	1291	Intergenic	Intergenic	-72574	NM_080431	140625	Hs.236635	NM_080431	ENSG00000169717	ACTRT2	ARPM2|ARPT2|Arp-T2|HARPM2	actin related protein T2	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr1-3252	chr1	2993886	2995212	+	22.4	1326	"intron (NM_199454, intron 1 of 16)"	"intron (NM_199454, intron 1 of 16)"	8807	NM_199454	63976	Hs.99500	NM_022114	ENSG00000142611	PRDM16	CMD1LL|KMT8F|LVNC8|MEL1|PFM13	PR/SET domain 16	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr1-3255	chr1	3023368	3024700	+	21.1	1332	"intron (NM_199454, intron 1 of 16)"	"intron (NM_199454, intron 1 of 16)"	-20505	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	21.12	3.4	6.211764706	2.41E-08
chr1-3257	chr1	3042384	3043384	+	14.7	1000	"intron (NM_199454, intron 1 of 16)"	"intron (NM_199454, intron 1 of 16)"	-1655	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr1-3259	chr1	3122619	3123884	+	19.8	1265	"intron (NM_199454, intron 2 of 16)"	"intron (NM_199454, intron 2 of 16)"	78712	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr1-3261	chr1	3133169	3138224	+	67.8	5055	"intron (NM_199454, intron 2 of 16)"	"intron (NM_199454, intron 2 of 16)"	91157	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	67.85	10.19	6.658488714	5.43E-26
chr1-3262	chr1	3175218	3176218	+	15.4	1000	"intron (NM_199454, intron 3 of 16)"	"intron (NM_199454, intron 3 of 16)"	131179	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr1-3263	chr1	3180550	3181550	+	16.6	1000	"intron (NM_199454, intron 3 of 16)"	"intron (NM_199454, intron 3 of 16)"	136511	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	16.64	0.49	33.95918367	3.68E-16
chr1-3270	chr1	4007501	4008501	+	16	1000	"intron (NR_040065, intron 2 of 2)"	"intron (NR_040065, intron 2 of 2)"	7329	NR_040065	728716	Hs.668359	NR_040065		LINC01346	-	long intergenic non-protein coding RNA 1346	ncRNA	16	2.91	5.498281787	4.98E-06
chr1-3273	chr1	4312158	4313158	+	16	1000	Intergenic	MLT2A2|LTR|ERVL	-159453	NR_027088	284661	Hs.278112	NR_027088	ENSG00000235054	LINC01777	-	long intergenic non-protein coding RNA 1777	ncRNA	16	0.97	16.49484536	3.54E-11
chr1-3274	chr1	4715689	4719519	+	62.1	3830	"intron (NM_001042478, intron 1 of 5)"	"intron (NM_001042478, intron 1 of 5)"	2499	NM_018836	55966	Hs.12473	NM_018836	ENSG00000196581	AJAP1	MOT8|SHREW-1|SHREW1	adherens junctions associated protein 1	protein-coding	62.09	10.68	5.813670412	3.83E-21
chr1-3279	chr1	7110763	7112055	+	20.5	1292	"intron (NM_015215, intron 3 of 22)"	"intron (NM_015215, intron 3 of 22)"	266025	NR_038934	23261	Hs.397705	NM_015215	ENSG00000171735	CAMTA1	CANPMR	calmodulin binding transcription activator 1	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr1-3281	chr1	7127223	7128510	+	20.5	1287	"intron (NM_015215, intron 3 of 22)"	MLT1L|LTR|ERVL-MaLR	282482	NR_038934	23261	Hs.397705	NM_015215	ENSG00000171735	CAMTA1	CANPMR	calmodulin binding transcription activator 1	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr1-3285	chr1	7375302	7376302	+	16	1000	"intron (NM_015215, intron 5 of 22)"	MLT1C|LTR|ERVL-MaLR	-455527	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	16	1.46	10.95890411	3.44E-09
chr1-3286	chr1	7523500	7524500	+	16.6	1000	"intron (NM_015215, intron 5 of 22)"	"intron (NM_015215, intron 5 of 22)"	-307329	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	16.64	0.49	33.95918367	3.68E-16
chr1-3290	chr1	7596165	7597165	+	15.4	1000	"intron (NM_015215, intron 6 of 22)"	"intron (NM_015215, intron 6 of 22)"	-234664	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-3292	chr1	7687983	7689289	+	17.9	1306	"intron (NM_015215, intron 6 of 22)"	MIRc|SINE|MIR	-142693	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr1-3294	chr1	7698310	7699310	+	16	1000	"intron (NM_015215, intron 6 of 22)"	"intron (NM_015215, intron 6 of 22)"	-132519	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-3295	chr1	7740034	7741034	+	15.4	1000	"intron (NM_015215, intron 11 of 22)"	CpG	-90795	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-3296	chr1	7743100	7744396	+	20.5	1296	"intron (NM_015215, intron 11 of 22)"	"intron (NM_015215, intron 11 of 22)"	-87581	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr1-3298	chr1	7785196	7786196	+	16.6	1000	"intron (NM_015215, intron 11 of 22)"	"intron (NM_015215, intron 11 of 22)"	-45633	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-3299	chr1	7824713	7826107	+	22.4	1394	"intron (NM_015215, intron 22 of 22)"	"intron (NM_015215, intron 22 of 22)"	-5919	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr1-3301	chr1	8262585	8263585	+	16	1000	Intergenic	MIR|SINE|MIR	-5647	NR_125998	102724539	Hs.516816	NR_125998	ENSG00000227634	LINC01714	-	long intergenic non-protein coding RNA 1714	ncRNA	16	1.94	8.24742268	7.67E-08
chr1-3302	chr1	8375162	8378397	+	37.8	3235	Intergenic	Intergenic	-1366	NM_001080397	50651	Hs.463036	NM_001080397	ENSG00000162426	SLC45A1	DNB5	solute carrier family 45 member 1	protein-coding	37.76	5.82	6.487972509	1.70E-14
chr1-3303	chr1	8982999	8985830	+	42.9	2831	Intergenic	HERVFH21-int|LTR|ERV1	-21479	NM_001270500	765	Hs.100322	NM_001215	ENSG00000131686	CA6	CA-VI|GUSTIN	carbonic anhydrase 6	protein-coding	42.89	7.77	5.51994852	2.23E-14
chr1-3305	chr1	9159575	9160575	+	16	1000	Intergenic	Intergenic	-27789	NM_001328619	6518	Hs.530003	NM_003039	ENSG00000142583	SLC2A5	GLUT-5|GLUT5	solute carrier family 2 member 5	protein-coding	16	0.97	16.49484536	3.54E-11
chr1-3309	chr1	9435621	9436621	+	15.4	1000	Intergenic	Intergenic	52854	NR_104623	100506022	Hs.131775	NR_104622		LOC100506022	-	uncharacterized LOC100506022	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr1-3322	chr1	10835944	10836944	+	15.4	1000	"intron (NM_017766, intron 1 of 15)"	"intron (NM_017766, intron 1 of 15)"	20289	NM_001079843	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-3328	chr1	10927566	10928566	+	16.6	1000	Intergenic	Intergenic	-71333	NM_017766	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-3330	chr1	11019641	11020641	+	16.6	1000	"intron (NM_001170754, intron 5 of 12)"	"intron (NM_001170754, intron 5 of 12)"	21953	NM_001170754	148345	Hs.127026	NM_173507	ENSG00000175262	C1orf127	-	chromosome 1 open reading frame 127	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-3333	chr1	11719610	11723495	+	64.6	3885	"non-coding (NR_130909, exon 5 of 5)"	"non-coding (NR_130909, exon 5 of 5)"	-2598	NM_018438	26270	Hs.464419	NM_018438	ENSG00000116663	FBXO6	FBG2|FBS2|FBX6|Fbx6b	F-box protein 6	protein-coding	64.65	8.74	7.397025172	2.09E-26
chr1-334	chr1	26106096	26110853	+	82.6	4757	"intron (NM_020379, intron 10 of 11)"	AluJb|SINE|Alu	-18193	NM_020451	57190	Hs.323396	NM_020451	ENSG00000162430	SELENON	CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1	selenoprotein N	protein-coding	82.57	14.08	5.864346591	6.91E-28
chr1-3340	chr1	12808512	12809512	+	16	1000	"intron (NM_001330361, intron 1 of 2)"	L1MB3|LINE|L1	2878	NM_001330361	93190	Hs.98095	NM_152290	ENSG00000157330	C1orf158	-	chromosome 1 open reading frame 158	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-3347	chr1	14172361	14173361	+	15.4	1000	Intergenic	L1MD1|LINE|L1	96985	NM_001007257	7799	Hs.371823	NM_012231	ENSG00000116731	PRDM2	HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2	PR/SET domain 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-3348	chr1	14507370	14508370	+	16.6	1000	Intergenic	Intergenic	-417343	NM_015209	23254	Hs.368823	NM_015209	ENSG00000189337	KAZN	KAZ	"kazrin, periplakin interacting protein"	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr1-335	chr1	32227966	32229461	+	30.1	1495	"intron (NM_001294336, intron 1 of 31)"	CpG	951	NM_001294336	576	Hs.524138	NM_001703	ENSG00000121753	ADGRB2	BAI2	adhesion G protein-coupled receptor B2	protein-coding	30.08	2.91	10.33676976	7.13E-16
chr1-3351	chr1	15146826	15148103	+	17.9	1277	"intron (NM_201628, intron 1 of 14)"	"intron (NM_201628, intron 1 of 14)"	-103161	NM_001018000	23254	Hs.368823	NM_015209	ENSG00000189337	KAZN	KAZ	"kazrin, periplakin interacting protein"	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr1-3352	chr1	15220345	15221345	+	16	1000	"intron (NM_201628, intron 1 of 14)"	MIR|SINE|MIR	-29780	NM_001018000	23254	Hs.368823	NM_015209	ENSG00000189337	KAZN	KAZ	"kazrin, periplakin interacting protein"	protein-coding	16	0.97	16.49484536	3.54E-11
chr1-3354	chr1	15471755	15472755	+	15.4	1000	"intron (NR_027136, intron 1 of 4)"	"intron (NR_027136, intron 1 of 4)"	6705	NR_027136	200197	Hs.531424	NM_182534	ENSG00000175147	TMEM51-AS1	C1orf126	TMEM51 antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr1-3355	chr1	15576377	15577377	+	16	1000	"intron (NM_052929, intron 1 of 30)"	L1ME2z|LINE|L1	3109	NM_052929	114827	Hs.659997	NM_052929	ENSG00000142621	FHAD1	-	forkhead associated phosphopeptide binding domain 1	protein-coding	16	1.46	10.95890411	3.44E-09
chr1-3357	chr1	15606900	15607900	+	16	1000	"intron (NM_052929, intron 3 of 30)"	"intron (NM_052929, intron 3 of 30)"	33632	NM_052929	114827	Hs.659997	NM_052929	ENSG00000142621	FHAD1	-	forkhead associated phosphopeptide binding domain 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-3359	chr1	15687922	15689781	+	28.8	1859	"intron (NM_052929, intron 21 of 30)"	"intron (NM_052929, intron 21 of 30)"	-47540	NM_024329	79180	Hs.465374	NM_024329	ENSG00000142634	EFHD2	SWS1	EF-hand domain family member D2	protein-coding	28.8	3.88	7.422680412	1.97E-12
chr1-3363	chr1	15719778	15722554	+	44.8	2776	"intron (NM_052929, intron 30 of 30)"	"intron (NM_052929, intron 30 of 30)"	-15225	NM_024329	79180	Hs.465374	NM_024329	ENSG00000142634	EFHD2	SWS1	EF-hand domain family member D2	protein-coding	44.81	6.31	7.101426307	1.43E-18
chr1-3364	chr1	15923167	15924167	+	16.6	1000	Intergenic	MSTB1|LTR|ERVL-MaLR	-12062	NM_024758	79814	Hs.461532	NM_024758	ENSG00000116771	AGMAT	-	agmatinase	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-3366	chr1	16323599	16324599	+	16.6	1000	Intergenic	Intergenic	-6632	NM_178840	149563	Hs.29190	NM_178840	ENSG00000183888	C1orf64	ERRF	chromosome 1 open reading frame 64	protein-coding	16.64	0	17.14115603	3.68E-16
chr1-3367	chr1	16345173	16350004	+	81.9	4831	promoter-TSS (NM_001257139)	promoter-TSS (NM_001257139)	-898	NM_004070	1187	Hs.591533	NM_004070	ENSG00000186510	CLCNKA	CLCK1|ClC-K1|hClC-Ka	chloride voltage-gated channel Ka	protein-coding	81.93	12.13	6.754328112	2.29E-31
chr1-3372	chr1	17023313	17028707	+	110.1	5394	"non-coding (NR_026567, exon 8 of 11)"	"non-coding (NR_026567, exon 8 of 11)"	18260	NR_037446	100500876		NR_037446	ENSG00000263811	MIR3675	-	microRNA 3675	ncRNA	110.09	16.99	6.479693938	3.11E-40
chr1-3374	chr1	17037974	17045133	+	122.9	7159	"intron (NR_026567, intron 1 of 10)"	AluSg|SINE|Alu	5099	NR_026567	284729	Hs.548239	NR_026567	ENSG00000268869	ESPNP	dJ1182A14.1	espin pseudogene	pseudo	122.9	24.75	4.965656566	1.57E-35
chr1-338	chr1	34151055	34152633	+	33.3	1578	"intron (NM_001281956, intron 25 of 70)"	(CAAAA)n|Simple_repeat|Simple_repeat	-174232	NM_145205	127540	Hs.568628	NM_145205	ENSG00000176256	HMGB4	dJ1007G16.5	high mobility group box 4	protein-coding	33.28	4.85	6.86185567	7.28E-14
chr1-3380	chr1	17305935	17306935	+	16.6	1000	"intron (NM_001135247, intron 1 of 8)"	"intron (NM_001135247, intron 1 of 8)"	738	NM_001135248	4237	Hs.389137	NM_002403	ENSG00000117122	MFAP2	MAGP|MAGP-1|MAGP1	microfibrillar associated protein 2	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr1-3381	chr1	17424912	17425912	+	16	1000	"intron (NM_007365, intron 3 of 15)"	"intron (NM_007365, intron 3 of 15)"	20536	NM_007365	11240	Hs.33455	NM_007365	ENSG00000117115	PADI2	PAD-H19|PAD2|PDI2	peptidyl arginine deiminase 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-3383	chr1	17603171	17604171	+	16.6	1000	promoter-TSS (NR_039768)	promoter-TSS (NR_039768)	-713	NR_039768	100616188		NR_039768	ENSG00000266634	MIR3972	-	microRNA 3972	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr1-3384	chr1	17695252	17696689	+	24.3	1437	Intergenic	Intergenic	-2721	NM_207421	353238	Hs.531598	NM_207421	ENSG00000276747	PADI6	PREMBL2|hPADVI	peptidyl arginine deiminase 6	protein-coding	24.32	1.94	12.53608247	5.33E-15
chr1-3386	chr1	17841436	17843019	+	20.5	1583	Intergenic	AluJb|SINE|Alu	-24103	NR_137287	55160	Hs.443460	NM_018125	ENSG00000074964	ARHGEF10L	GrinchGEF	Rho guanine nucleotide exchange factor 10 like	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr1-3388	chr1	18159069	18160069	+	16	1000	Intergenic	Intergenic	77761	NM_030812	81569	Hs.2149	NM_030812	ENSG00000117148	ACTL8	CT57	actin like 8	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-3389	chr1	18357235	18358235	+	16	1000	Intergenic	Intergenic	-34416	NR_125946	101927876	Hs.522954	NR_125946	ENSG00000261781	LINC01654	-	long intergenic non-protein coding RNA 1654	ncRNA	16	3.88	4.12371134	7.91E-05
chr1-339	chr1	35207069	35208355	+	25.6	1286	Intergenic	Intergenic	-12936	NM_005268	2709	Hs.198249	NM_005268	ENSG00000189280	GJB5	CX31.1	gap junction protein beta 5	protein-coding	25.6	5.82	4.39862543	7.99E-08
chr1-3391	chr1	18491089	18492440	+	19.8	1351	"intron (NM_032880, intron 1 of 9)"	MLT1B|LTR|ERVL-MaLR	57524	NM_032880	84966	Hs.212511	NM_032880	ENSG00000117154	IGSF21	-	immunoglobin superfamily member 21	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr1-3393	chr1	18527346	18529887	+	32.6	2541	"intron (NM_032880, intron 1 of 9)"	"intron (NM_032880, intron 1 of 9)"	94376	NM_032880	84966	Hs.212511	NM_032880	ENSG00000117154	IGSF21	-	immunoglobin superfamily member 21	protein-coding	32.64	4.85	6.729896907	5.03E-13
chr1-3395	chr1	18589940	18590940	+	16.6	1000	"intron (NM_032880, intron 2 of 9)"	"intron (NM_032880, intron 2 of 9)"	156200	NM_032880	84966	Hs.212511	NM_032880	ENSG00000117154	IGSF21	-	immunoglobin superfamily member 21	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-3396	chr1	18676396	18677396	+	15.4	1000	"intron (NM_032880, intron 4 of 9)"	"intron (NM_032880, intron 4 of 9)"	-130528	NM_152375	127707	Hs.406913	NM_152375	ENSG00000179023	KLHDC7A	-	kelch domain containing 7A	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-3397	chr1	18768390	18769697	+	17.9	1307	Intergenic	AluJr|SINE|Alu	-38381	NM_152375	127707	Hs.406913	NM_152375	ENSG00000179023	KLHDC7A	-	kelch domain containing 7A	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr1-3398	chr1	18794361	18795661	+	19.8	1300	Intergenic	Intergenic	-12413	NM_152375	127707	Hs.406913	NM_152375	ENSG00000179023	KLHDC7A	-	kelch domain containing 7A	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr1-3404	chr1	19019725	19020725	+	16.6	1000	"intron (NM_002584, intron 5 of 7)"	"intron (NM_002584, intron 5 of 7)"	62725	NM_002584	5081	Hs.113253	NM_002584	ENSG00000009709	PAX7	HUP1|PAX7B|RMS2	paired box 7	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-3408	chr1	19162769	19163769	+	16.6	1000	Intergenic	MLT1K|LTR|ERVL-MaLR	22886	NM_152232	80834	Hs.553548	NM_152232	ENSG00000179002	TAS1R2	GPR71|T1R2|TR2	taste 1 receptor member 2	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr1-3409	chr1	19170606	19171606	+	15.4	1000	"intron (NM_152232, intron 4 of 5)"	AluSz|SINE|Alu	15049	NM_152232	80834	Hs.553548	NM_152232	ENSG00000179002	TAS1R2	GPR71|T1R2|TR2	taste 1 receptor member 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-3410	chr1	19291507	19293878	+	39.7	2371	Intergenic	Intergenic	-9866	NM_001136265	126917	Hs.466625	NM_001136265	ENSG00000169991	IFFO2	-	intermediate filament family orphan 2	protein-coding	39.69	3.88	10.22938144	5.62E-21
chr1-3411	chr1	19325477	19326477	+	16	1000	Intergenic	L1MEc|LINE|L1	-43151	NM_001136265	126917	Hs.466625	NM_001136265	ENSG00000169991	IFFO2	-	intermediate filament family orphan 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-3412	chr1	19337354	19339463	+	31.4	2109	Intergenic	L2c|LINE|L2	-55582	NM_001136265	126917	Hs.466625	NM_001136265	ENSG00000169991	IFFO2	-	intermediate filament family orphan 2	protein-coding	31.36	1.94	16.16494845	8.26E-21
chr1-3423	chr1	20306210	20307210	+	15.4	1000	promoter-TSS (NM_001161729)	promoter-TSS (NM_001161729)	222	NM_001161728	5320	Hs.466804	NM_000300	ENSG00000188257	PLA2G2A	MOM1|PLA2|PLA2B|PLA2L|PLA2S|PLAS1|sPLA2	phospholipase A2 group IIA	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-3431	chr1	20802561	20804103	+	22.4	1542	Intergenic	MIR|SINE|MIR	9396	NM_018584	55450	Hs.731383	NM_018584	ENSG00000162545	CAMK2N1	PRO1489	calcium/calmodulin dependent protein kinase II inhibitor 1	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr1-3432	chr1	20806799	20807799	+	16	1000	Intergenic	MIR|SINE|MIR	5429	NM_018584	55450	Hs.731383	NM_018584	ENSG00000162545	CAMK2N1	PRO1489	calcium/calmodulin dependent protein kinase II inhibitor 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-3433	chr1	21044022	21045381	+	21.1	1359	promoter-TSS (NM_001122819)	promoter-TSS (NM_001122819)	-191	NM_001287212	57576	Hs.130411	NM_020816	ENSG00000117245	KIF17	KIF17B|KIF3X|KLP-2|OSM-3	kinesin family member 17	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr1-3436	chr1	22164192	22165462	+	20.5	1270	"intron (NM_001291860, intron 74 of 96)"	"intron (NM_001291860, intron 74 of 96)"	26069	NM_001013693	401944	Hs.745158	NM_001013693	ENSG00000187942	LDLRAD2	-	low density lipoprotein receptor class A domain containing 2	protein-coding	20.48	2.43	8.427983539	2.25E-10
chr1-3442	chr1	22615079	22616079	+	16.6	1000	Intergenic	MIRb|SINE|MIR	22847	NR_039613	100616433		NR_039613	ENSG00000266564	MIR4418	-	microRNA 4418	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr1-3448	chr1	22972564	22973564	+	16	1000	"intron (NM_172369, intron 2 of 2)"	L1MD2|LINE|L1	2954	NM_001347620	714	Hs.467753	NM_172369	ENSG00000159189	C1QC	C1Q-C|C1QG	complement C1q C chain	protein-coding	16	1.46	10.95890411	3.44E-09
chr1-3451	chr1	23040113	23041113	+	16.6	1000	"intron (NM_017449, intron 1 of 15)"	"intron (NM_017449, intron 1 of 15)"	3282	NM_001309192	2048	Hs.380705	NM_004442	ENSG00000133216	EPHB2	CAPB|DRT|EK5|EPHT3|ERK|Hek5|PCBC|Tyro5	EPH receptor B2	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr1-3457	chr1	23272554	23273554	+	15.4	1000	Intergenic	AluY|SINE|Alu	18869	NM_001289974	646262		NM_001289974	ENSG00000215906	LACTBL1	-	lactamase beta like 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-3459	chr1	23760605	23761605	+	16.6	1000	"exon (NM_001143778, exon 17 of 24)"	"exon (NM_001143778, exon 17 of 24)"	-9833	NM_003196	6920	Hs.446354	NM_003196	ENSG00000204219	TCEA3	TFIIS|TFIIS.H	transcription elongation factor A3	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr1-3460	chr1	23894382	23895713	+	28.2	1331	Intergenic	CpG	-8762	NM_002167	3399	Hs.76884	NM_002167	ENSG00000117318	ID3	HEIR-1|bHLHb25	"inhibitor of DNA binding 3, HLH protein"	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr1-3461	chr1	24381373	24382943	+	25.6	1570	TTS (NM_152372)	TTS (NM_152372)	56507	NM_152372	127294	Hs.523413	NM_152372	ENSG00000142661	MYOM3	-	myomesin 3	protein-coding	25.6	0.97	26.39175258	7.61E-22
chr1-3462	chr1	24434121	24435121	+	16.6	1000	"intron (NM_152372, intron 2 of 36)"	"intron (NM_152372, intron 2 of 36)"	4044	NM_152372	127294	Hs.523413	NM_152372	ENSG00000142661	MYOM3	-	myomesin 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-3464	chr1	24469699	24470699	+	15.4	1000	promoter-TSS (NM_021258)	promoter-TSS (NM_021258)	-424	NM_021258	58985	Hs.110915	NM_021258	ENSG00000142677	IL22RA1	CRF2-9|IL22R|IL22R1	interleukin 22 receptor subunit alpha 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-3465	chr1	24475137	24476137	+	16.6	1000	Intergenic	Intergenic	-5862	NM_021258	58985	Hs.110915	NM_021258	ENSG00000142677	IL22RA1	CRF2-9|IL22R|IL22R1	interleukin 22 receptor subunit alpha 1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr1-3466	chr1	24484053	24485394	+	17.9	1341	"intron (NM_173065, intron 5 of 5)"	LTR16C|LTR|ERVL	-14948	NM_021258	58985	Hs.110915	NM_021258	ENSG00000142677	IL22RA1	CRF2-9|IL22R|IL22R1	interleukin 22 receptor subunit alpha 1	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr1-3467	chr1	24513390	24514687	+	22.4	1297	promoter-TSS (NM_173065)	promoter-TSS (NM_173065)	-273	NM_173064	163702	Hs.221375	NM_170743	ENSG00000185436	IFNLR1	CRF2/12|IFNLR|IL-28R1|IL28RA|LICR2	interferon lambda receptor 1	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr1-3468	chr1	24608603	24609603	+	16.6	1000	Intergenic	L1ME4a|LINE|L1	-36709	NM_198173	57822	Hs.657920	NM_021180	ENSG00000158055	GRHL3	SOM|TFCP2L4|VWS2	grainyhead like transcription factor 3	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-3470	chr1	24917870	24918870	+	16	1000	"intron (NM_001010980, intron 1 of 3)"	"intron (NM_001010980, intron 1 of 3)"	35803	NM_001010980	400746	Hs.200253	NM_001010980	ENSG00000184454	NCMAP	C1orf130|MP11	non-compact myelin associated protein	protein-coding	16	0.97	16.49484536	3.54E-11
chr1-3477	chr1	25989987	25990987	+	14.7	1000	"intron (NM_020379, intron 1 of 11)"	"intron (NM_020379, intron 1 of 11)"	46528	NM_020379	57134	Hs.197043	NM_020379	ENSG00000117643	MAN1C1	HMIC|MAN1A3|MAN1C|pp6318	mannosidase alpha class 1C member 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr1-3478	chr1	26021149	26022479	+	21.8	1330	"intron (NM_020379, intron 2 of 11)"	"intron (NM_020379, intron 2 of 11)"	77855	NM_020379	57134	Hs.197043	NM_020379	ENSG00000117643	MAN1C1	HMIC|MAN1A3|MAN1C|pp6318	mannosidase alpha class 1C member 1	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr1-3484	chr1	26391763	26394780	+	44.2	3017	"intron (NM_032588, intron 1 of 8)"	MIRc|SINE|MIR	854	NM_032588	84676	Hs.279709	NM_032588	ENSG00000158022	TRIM63	IRF|MURF1|MURF2|RNF28|SMRZ	tripartite motif containing 63	protein-coding	44.17	7.77	5.684684685	3.96E-15
chr1-3489	chr1	26466744	26467744	+	14.7	1000	Intergenic	Intergenic	-18267	NM_024869	79927	Hs.694119	NM_024869	ENSG00000197245	FAM110D	GRRP1	family with sequence similarity 110 member D	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-3492	chr1	27235512	27236512	+	16	1000	Intergenic	Intergenic	4555	NM_021969	8431	Hs.427055	NM_021969	ENSG00000131910	NR0B2	SHP|SHP1	nuclear receptor subfamily 0 group B member 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-3495	chr1	29633398	29634926	+	25.6	1528	"intron (NM_133177, intron 19 of 30)"	"intron (NM_133177, intron 19 of 30)"	42464	NR_110758	101928460	Hs.434659	NR_110758	ENSG00000230523	LINC01756	-	long intergenic non-protein coding RNA 1756	ncRNA	25.6	4.85	5.278350515	4.26E-09
chr1-3497	chr1	29797237	29798237	+	15.4	1000	Intergenic	Intergenic	-121111	NR_110758	101928460	Hs.434659	NR_110758	ENSG00000230523	LINC01756	-	long intergenic non-protein coding RNA 1756	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr1-3499	chr1	30051082	30052082	+	16.6	1000	Intergenic	Intergenic	-374956	NR_110758	101928460	Hs.434659	NR_110758	ENSG00000230523	LINC01756	-	long intergenic non-protein coding RNA 1756	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr1-3500	chr1	30258475	30259475	+	15.4	1000	Intergenic	L2c|LINE|L2	251484	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr1-3501	chr1	30527312	30530662	+	39	3350	Intergenic	Intergenic	-18528	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	39.04	6.8	5.741176471	1.26E-13
chr1-3503	chr1	30674705	30675705	+	16.6	1000	Intergenic	MLT1A1|LTR|ERVL-MaLR	-164746	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr1-3504	chr1	31111028	31112304	+	17.9	1276	Intergenic	Intergenic	-79953	NR_034182	100129196	Hs.659751	NR_034182	ENSG00000186056	MATN1-AS1	-	MATN1 antisense RNA 1	ncRNA	17.92	0.97	18.4742268	1.12E-13
chr1-3512	chr1	31884296	31887493	+	64.6	3197	promoter-TSS (NM_001199039)	promoter-TSS (NM_001199039)	-69	NM_178865	347735	Hs.270655	NM_018565	ENSG00000168528	SERINC2	FKSG84|PRO0899|TDE2|TDE2L	serine incorporator 2	protein-coding	64.65	7.77	8.32046332	1.21E-28
chr1-3515	chr1	32123576	32124576	+	16	1000	"intron (NM_001856, intron 64 of 70)"	"intron (NM_001856, intron 64 of 70)"	-13238	NR_033686	553115	Hs.470417	NM_012392	ENSG00000162517	PEF1	ABP32|PEF1A	penta-EF-hand domain containing 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-3516	chr1	32150580	32151580	+	16.6	1000	"intron (NM_001856, intron 29 of 70)"	"intron (NM_001856, intron 29 of 70)"	18688	NM_001856	1307	Hs.368921	NM_001856	ENSG00000084636	COL16A1	447AA|FP1572	collagen type XVI alpha 1 chain	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-3522	chr1	32250358	32251358	+	16	1000	Intergenic	Intergenic	-21194	NM_001294335	576	Hs.524138	NM_001703	ENSG00000121753	ADGRB2	BAI2	adhesion G protein-coupled receptor B2	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-3523	chr1	32869410	32870410	+	16	1000	Intergenic	AluJb|SINE|Alu	-9848	NM_018045	55108	Hs.353454	NM_018045	ENSG00000160058	BSDC1	-	BSD domain containing 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-3528	chr1	33358821	33361778	+	39	2957	TTS (NM_002143)	TTS (NM_002143)	6742	NM_001329724	113452	Hs.534521	NM_033504	ENSG00000121900	TMEM54	BCLP|CAC-1|CAC1	transmembrane protein 54	protein-coding	39.04	6.8	5.741176471	1.26E-13
chr1-3531	chr1	33689387	33690387	+	15.4	1000	Intergenic	L1MEg|LINE|L1	-32287	NM_152493	149076	Hs.743358	NM_152493	ENSG00000160094	ZNF362	RN|lin-29	zinc finger protein 362	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-3532	chr1	33834618	33836042	+	22.4	1424	"intron (NM_198040, intron 4 of 13)"	"intron (NM_198040, intron 4 of 13)"	5864	NM_001330488	1912	Hs.524271	NM_004427	ENSG00000134686	PHC2	EDR2|HPH2|PH2	polyhomeotic homolog 2	protein-coding	22.4	0.97	23.09278351	1.19E-17
chr1-3534	chr1	33893353	33894353	+	16	1000	Intergenic	Intergenic	-44379	NM_145238	7579	Hs.442705	NM_145238	ENSG00000121903	ZSCAN20	KOX29|ZFP-31|ZNF31|ZNF360	zinc finger and SCAN domain containing 20	protein-coding	16	2.43	6.58436214	7.90E-07
chr1-3537	chr1	34083766	34085509	+	27.5	1743	"intron (NM_001281956, intron 37 of 70)"	"intron (NM_001281956, intron 37 of 70)"	146405	NM_145238	7579	Hs.442705	NM_145238	ENSG00000121903	ZSCAN20	KOX29|ZFP-31|ZNF31|ZNF360	zinc finger and SCAN domain containing 20	protein-coding	27.52	2.91	9.457044674	7.03E-14
chr1-3539	chr1	34104226	34106037	+	31.4	1811	"intron (NM_001281956, intron 29 of 70)"	L2c|LINE|L2	166899	NM_145238	7579	Hs.442705	NM_145238	ENSG00000121903	ZSCAN20	KOX29|ZFP-31|ZNF31|ZNF360	zinc finger and SCAN domain containing 20	protein-coding	31.36	3.88	8.082474227	3.25E-14
chr1-3540	chr1	34315615	34316615	+	15.4	1000	"intron (NM_001281956, intron 5 of 70)"	"intron (NM_001281956, intron 5 of 70)"	-9961	NM_145205	127540	Hs.568628	NM_145205	ENSG00000176256	HMGB4	dJ1007G16.5	high mobility group box 4	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-3543	chr1	35109205	35110205	+	14.7	1000	Intergenic	L2c|LINE|L2	25590	NR_030278	693137		NR_030278	ENSG00000207941	MIR552	MIRN552|hsa-mir-552	microRNA 552	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr1-3546	chr1	35391123	35392123	+	16	1000	"intron (NM_001080418, intron 1 of 11)"	"intron (NM_001080418, intron 1 of 11)"	3563	NM_001080418	58512	Hs.733945	NM_001080418	ENSG00000116544	DLGAP3	DAP3|SAPAP3	DLG associated protein 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-3562	chr1	37343729	37344729	+	16	1000	"intron (NM_000831, intron 3 of 15)"	MIRc|SINE|MIR	155615	NM_000831	2899	Hs.128848	NM_000831	ENSG00000163873	GRIK3	EAA5|GLR7|GLUR7|GluK3|GluR7a	glutamate ionotropic receptor kainate type subunit 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-3567	chr1	37703962	37704962	+	16	1000	Intergenic	Intergenic	77298	NR_036217	100422898		NR_036217	ENSG00000264698	MIR4255	-	microRNA 4255	ncRNA	16	3.88	4.12371134	7.91E-05
chr1-3569	chr1	37854445	37855445	+	15.4	1000	Intergenic	Intergenic	85099	NR_038842	728431	Hs.380738	NR_038842	ENSG00000233621	LINC01137	-	long intergenic non-protein coding RNA 1137	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr1-3571	chr1	38551536	38552536	+	16	1000	Intergenic	L2c|LINE|L2	-2867	NR_037432	100500801		NR_037432	ENSG00000265596	MIR3659	mir-3659	microRNA 3659	ncRNA	16	0.97	16.49484536	3.54E-11
chr1-3573	chr1	38554953	38555953	+	16	1000	TTS (NR_037432)	TTS (NR_037432)	550	NR_037432	100500801		NR_037432	ENSG00000265596	MIR3659	mir-3659	microRNA 3659	ncRNA	16	0.49	32.65306122	1.26E-14
chr1-3578	chr1	38920934	38921934	+	16	1000	Intergenic	MIR3|SINE|MIR	-240995	NR_038928	339442	Hs.434245	NR_038928	ENSG00000237290	LINC01343	-	long intergenic non-protein coding RNA 1343	ncRNA	16	1.94	8.24742268	7.67E-08
chr1-3581	chr1	39002693	39003693	+	16.6	1000	Intergenic	L1ME4a|LINE|L1	322302	NM_022157	64121	Hs.532461	NM_022157	ENSG00000116954	RRAGC	GTR2|RAGC|TIB929	Ras related GTP binding C	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr1-3582	chr1	39037290	39038290	+	14.1	1000	Intergenic	Intergenic	287705	NM_022157	64121	Hs.532461	NM_022157	ENSG00000116954	RRAGC	GTR2|RAGC|TIB929	Ras related GTP binding C	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr1-3583	chr1	39120559	39121559	+	16.6	1000	Intergenic	Intergenic	204436	NM_022157	64121	Hs.532461	NM_022157	ENSG00000116954	RRAGC	GTR2|RAGC|TIB929	Ras related GTP binding C	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-3584	chr1	40135304	40138909	+	57.6	3605	"intron (NM_032526, intron 1 of 5)"	CpG	604	NM_032526	84618	Hs.307006	NM_032526	ENSG00000116981	NT5C1A	CN-I|CN-IA|CN1|CN1A|CNI	"5'-nucleotidase, cytosolic IA"	protein-coding	57.61	13.59	4.239146431	3.92E-15
chr1-3586	chr1	41827709	41829237	+	23	1528	"intron (NM_001291281, intron 1 of 2)"	"intron (NM_001291281, intron 1 of 2)"	870	NM_001291281	100132074	Hs.559677	NM_001291281		FOXO6	-	forkhead box O6	protein-coding	23.04	4.37	5.272311213	2.46E-08
chr1-3589	chr1	41952314	41955554	+	43.5	3240	Intergenic	Intergenic	-3580	NM_001956	1907	Hs.1407	NM_001956	ENSG00000127129	EDN2	ET-2|ET2|PPET2	endothelin 2	protein-coding	43.53	7.28	5.979395604	6.36E-16
chr1-3590	chr1	42506401	42507401	+	16.6	1000	Intergenic	Intergenic	-5305	NR_038261	59269	Hs.403972	NM_024503	ENSG00000127124	HIVEP3	KBP-1|KBP1|KRC|SHN3|Schnurri-3|ZAS3|ZNF40C	human immunodeficiency virus type I enhancer binding protein 3	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr1-3591	chr1	43368539	43369539	+	16	1000	Intergenic	Intergenic	45746	NR_104171	339539	Hs.434301	NR_104171		LOC339539	-	uncharacterized LOC339539	ncRNA	16	3.88	4.12371134	7.91E-05
chr1-3592	chr1	43509699	43510699	+	15.4	1000	Intergenic	AluJr|SINE|Alu	-85352	NM_006516	6513	Hs.473721	NM_006516	ENSG00000117394	SLC2A1	CSE|DYT17|DYT18|DYT9|EIG12|GLUT|GLUT-1|GLUT1|GLUT1DS|HTLVR|PED|SDCHCN	solute carrier family 2 member 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-3594	chr1	43599538	43600538	+	15.4	1000	Intergenic	MER4C|LTR|ERV1	-13556	NM_001101376	440585	Hs.657614	NM_001101376	ENSG00000186973	FAM183A	-	family with sequence similarity 183 member A	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-3596	chr1	43756307	43757307	+	16.6	1000	Intergenic	L2a|LINE|L2	-5519	NM_001164829	149466	Hs.158963	NM_182517	ENSG00000253313	C1orf210	TEMP	chromosome 1 open reading frame 210	protein-coding	16.64	0	17.14115603	3.68E-16
chr1-3597	chr1	43987643	43988643	+	16	1000	Intergenic	MIR|SINE|MIR	-3565	NM_001329137	5792	Hs.272062	NM_002840	ENSG00000142949	PTPRF	BNAH2|LAR	"protein tyrosine phosphatase, receptor type F"	protein-coding	16	1.46	10.95890411	3.44E-09
chr1-3601	chr1	44846219	44847219	+	16	1000	Intergenic	Intergenic	-24113	NM_018150	55182	Hs.456557	NM_018150	ENSG00000187147	RNF220	C1orf164	ring finger protein 220	protein-coding	16	1.46	10.95890411	3.44E-09
chr1-3607	chr1	44923613	44924894	+	23.7	1281	"intron (NM_001319957, intron 1 of 13)"	Tigger13a|DNA|TcMar-Tigger	34757	NM_001319957	55182	Hs.456557	NM_018150	ENSG00000187147	RNF220	C1orf164	ring finger protein 220	protein-coding	23.68	3.4	6.964705882	5.45E-10
chr1-3608	chr1	44930126	44931126	+	16.6	1000	"intron (NM_001319957, intron 1 of 13)"	L2c|LINE|L2	41130	NM_001319957	55182	Hs.456557	NM_018150	ENSG00000187147	RNF220	C1orf164	ring finger protein 220	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-3613	chr1	45011152	45012547	+	19.2	1395	TTS (NR_049849)	TTS (NR_049849)	684	NR_049849	100847089		NR_049849	ENSG00000263381	MIR5584	-	microRNA 5584	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr1-3617	chr1	45080550	45081550	+	16.6	1000	"intron (NM_001319956, intron 3 of 14)"	MLT1G3|LTR|ERVL-MaLR	59230	NM_024587	79639	Hs.22157	NM_024587	ENSG00000126106	TMEM53	NET4	transmembrane protein 53	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr1-362	chr1	231007803	231009102	+	32	1299	Intergenic	Intergenic	-2140	NR_110681	101927604	Hs.638929	NR_110681	ENSG00000223393	LOC101927604	-	uncharacterized LOC101927604	ncRNA	32	7.28	4.395604396	2.08E-09
chr1-3620	chr1	45703667	45704667	+	16	1000	Intergenic	L1ME2z|LINE|L1	-31917	NM_020883	57643	Hs.656613	NM_020883	ENSG00000162415	ZSWIM5	-	zinc finger SWIM-type containing 5	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-3622	chr1	46221202	46222202	+	16	1000	Intergenic	HERVIP10F-int|LTR|ERV1	-5217	NM_005897	3652	Hs.744252	NM_005897	ENSG00000197429	IPP	KLHL27	intracisternal A particle-promoted polypeptide	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-3623	chr1	46883746	46884746	+	16.6	1000	Intergenic	MIR|SINE|MIR	-15253	NR_045483	729041	Hs.170205	NR_045483		FAAHP1	-	fatty acid amide hydrolase pseudogene 1	pseudo	16.64	3.4	4.894117647	4.51E-06
chr1-3627	chr1	47908302	47911871	+	68.5	3569	Intergenic	CpG	-7097	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA	68.49	9.22	7.428416486	5.67E-28
chr1-3628	chr1	47947080	47948080	+	15.4	1000	Intergenic	MIRb|SINE|MIR	-44591	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr1-3632	chr1	48043965	48047061	+	48	3096	Intergenic	Intergenic	-142524	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA	48.01	9.22	5.207158351	3.58E-15
chr1-3635	chr1	48132813	48133813	+	15.4	1000	Intergenic	MLT1A1|LTR|ERVL-MaLR	-230324	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr1-3637	chr1	48188630	48191539	+	43.5	2909	Intergenic	Intergenic	272478	NM_001194986	388630	Hs.61504	NM_001194986	ENSG00000269113	TRABD2B	TIKI2	TraB domain containing 2B	protein-coding	43.53	3.88	11.21907216	4.33E-24
chr1-364	chr1	1141000	1143788	+	59.5	2788	promoter-TSS (NM_004195)	promoter-TSS (NM_004195)	-305	NM_148901	8784	Hs.212680	NM_004195	ENSG00000186891	TNFRSF18	AITR|CD357|GITR|GITR-D	TNF receptor superfamily member 18	protein-coding	59.53	7.77	7.661518662	5.01E-25
chr1-3641	chr1	48330806	48331806	+	16.6	1000	"intron (NM_001194986, intron 2 of 6)"	"intron (NM_001194986, intron 2 of 6)"	131256	NM_001194986	388630	Hs.61504	NM_001194986	ENSG00000269113	TRABD2B	TIKI2	TraB domain containing 2B	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-3643	chr1	48416531	48418483	+	30.7	1952	"intron (NM_001194986, intron 2 of 6)"	MIR3|SINE|MIR	45055	NM_001194986	388630	Hs.61504	NM_001194986	ENSG00000269113	TRABD2B	TIKI2	TraB domain containing 2B	protein-coding	30.72	4.85	6.334020619	3.34E-12
chr1-3644	chr1	50616277	50617277	+	16	1000	"intron (NR_136725, intron 3 of 4)"	MIRb|SINE|MIR	41489	NM_001324215	1996	Hs.213050	NM_021952	ENSG00000162374	ELAVL4	HUD|PNEM	ELAV like RNA binding protein 4	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-3648	chr1	53994032	53995625	+	25	1593	"intron (NM_147193, intron 4 of 9)"	"intron (NM_147193, intron 4 of 9)"	69756	NM_033067	63948	Hs.131654	NM_033067	ENSG00000143006	DMRTB1	-	DMRT like family B with proline rich C-terminal 1	protein-coding	24.96	0.97	25.73195876	2.01E-20
chr1-3651	chr1	54002876	54003876	+	16	1000	"intron (NM_147193, intron 3 of 9)"	"intron (NM_147193, intron 3 of 9)"	78304	NM_033067	63948	Hs.131654	NM_033067	ENSG00000143006	DMRTB1	-	DMRT like family B with proline rich C-terminal 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr1-3652	chr1	54012500	54013500	+	16	1000	"intron (NM_147193, intron 3 of 9)"	"intron (NM_147193, intron 3 of 9)"	87928	NM_033067	63948	Hs.131654	NM_033067	ENSG00000143006	DMRTB1	-	DMRT like family B with proline rich C-terminal 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr1-3653	chr1	54099634	54100634	+	14.7	1000	"intron (NM_147193, intron 1 of 9)"	L2a|LINE|L2	99743	NM_147193	148979	Hs.306691	NM_147193	ENSG00000174332	GLIS1	-	GLIS family zinc finger 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-3654	chr1	54107659	54108659	+	16	1000	"intron (NM_147193, intron 1 of 9)"	"intron (NM_147193, intron 1 of 9)"	91718	NM_147193	148979	Hs.306691	NM_147193	ENSG00000174332	GLIS1	-	GLIS family zinc finger 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-3656	chr1	54152026	54153026	+	16.6	1000	"intron (NM_147193, intron 1 of 9)"	L2b|LINE|L2	47351	NM_147193	148979	Hs.306691	NM_147193	ENSG00000174332	GLIS1	-	GLIS family zinc finger 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-3657	chr1	54176425	54177425	+	16	1000	"intron (NM_147193, intron 1 of 9)"	"intron (NM_147193, intron 1 of 9)"	22952	NM_147193	148979	Hs.306691	NM_147193	ENSG00000174332	GLIS1	-	GLIS family zinc finger 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-3660	chr1	55449475	55450475	+	16	1000	"intron (NM_182532, intron 1 of 2)"	"intron (NM_182532, intron 1 of 2)"	3638	NM_182532	199964	Hs.663950	NM_182532	ENSG00000143001	TMEM61	-	transmembrane protein 61	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-3662	chr1	55784075	55785075	+	15.4	1000	Intergenic	MIRb|SINE|MIR	93261	NR_039618	100616272		NR_039618	ENSG00000265822	MIR4422	mir-4422	microRNA 4422	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr1-3668	chr1	62780559	62781559	+	16.6	1000	"intron (NM_181712, intron 1 of 9)"	MIR|SINE|MIR	4024	NM_181712	163782	Hs.283398	NM_181712	ENSG00000132854	KANK4	ANKRD38|dJ1078M7.1	KN motif and ankyrin repeat domains 4	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr1-3672	chr1	64259284	64260578	+	20.5	1294	"intron (NM_001083592, intron 1 of 6)"	MIRb|SINE|MIR	20241	NM_001083592	4919	Hs.128753	NM_005012	ENSG00000185483	ROR1	NTRKR1|dJ537F10.1	receptor tyrosine kinase like orphan receptor 1	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr1-3684	chr1	65466827	65468999	+	35.2	2172	"intron (NR_119383, intron 1 of 6)"	"intron (NR_119383, intron 1 of 6)"	246	NR_119383	101927084	Hs.734218	NR_119383	ENSG00000226891	LINC01359	-	long intergenic non-protein coding RNA 1359	ncRNA	35.2	1.94	18.1443299	1.63E-24
chr1-3687	chr1	66997913	67000413	+	40.3	2500	promoter-TSS (NM_001308203)	promoter-TSS (NM_001308203)	-89	NM_001308203	84251	Hs.132121	NM_032291	ENSG00000118473	SGIP1	-	SH3 domain GRB2 like endophilin interacting protein 1	protein-coding	40.33	9.71	4.153450051	1.52E-10
chr1-3692	chr1	84463688	84465331	+	32.6	1643	"intron (NM_024686, intron 1 of 20)"	CpG	324	NM_024686	79739	Hs.445826	NM_024686	ENSG00000137941	TTLL7	-	tubulin tyrosine ligase like 7	protein-coding	32.64	2.43	13.43209877	9.19E-20
chr1-3694	chr1	85090717	85091717	+	16	1000	Intergenic	Intergenic	-4503	NR_125761	103695366	Hs.576097	NR_125761		LINC01461	TCONS_00001552	long intergenic non-protein coding RNA 1461	ncRNA	16	1.94	8.24742268	7.67E-08
chr1-3695	chr1	85310952	85311952	+	16	1000	"intron (NM_012152, intron 2 of 2)"	"intron (NM_012152, intron 2 of 2)"	47444	NM_012152	23566	Hs.527909	NM_012152	ENSG00000171517	LPAR3	EDG7|Edg-7|GPCR|HOFNH30|LP-A3|LPA3|RP4-678I3	lysophosphatidic acid receptor 3	protein-coding	16	3.4	4.705882353	2.25E-05
chr1-370	chr1	11958900	11961819	+	52.5	2919	Intergenic	L1M5|LINE|L1	26126	NM_138346	90231	Hs.520094	NM_138346	ENSG00000116685	KIAA2013	-	KIAA2013	protein-coding	52.49	8.74	6.005720824	6.11E-19
chr1-3703	chr1	90629314	90630314	+	16	1000	Intergenic	CT-rich|Low_complexity|Low_complexity	169160	NM_182976	284695	Hs.306221	NM_181781	ENSG00000162664	ZNF326	ZAN75|ZIRD|Zfp326|dJ871E2.1	zinc finger protein 326	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-3704	chr1	91171153	91174224	+	43.5	3071	Intergenic	CpG	10106	NM_020063	343472	Hs.451956	NM_020063	ENSG00000143032	BARHL2	-	BarH like homeobox 2	protein-coding	43.53	7.77	5.602316602	3.96E-15
chr1-3705	chr1	91215968	91217277	+	20.5	1309	Intergenic	Intergenic	-33828	NM_020063	343472	Hs.451956	NM_020063	ENSG00000143032	BARHL2	-	BarH like homeobox 2	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr1-3706	chr1	91933051	91934051	+	16.6	1000	Intergenic	LTR22B|LTR|ERVK	-32853	NM_003503	8317	Hs.533573	NM_003503	ENSG00000097046	CDC7	CDC7L1|HsCDC7|Hsk1|huCDC7	cell division cycle 7	protein-coding	16.64	0	17.14115603	3.68E-16
chr1-3708	chr1	92494550	92495852	+	21.1	1302	promoter-TSS (NM_173567)	promoter-TSS (NM_173567)	-332	NM_173567	253152	Hs.201555	NM_173567	ENSG00000172031	EPHX4	ABHD7|EH4|EPHXRP	epoxide hydrolase 4	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr1-3710	chr1	94206983	94207983	+	16.6	1000	"intron (NM_001261408, intron 2 of 13)"	MIRb|SINE|MIR	-60089	NM_003567	8412	Hs.36958	NM_003567	ENSG00000137936	BCAR3	NSP2|SH2D3B	breast cancer anti-estrogen resistance 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-3713	chr1	107495135	107496387	+	19.2	1252	Intergenic	L2c|LINE|L2	-103506	NM_018137	55170	Hs.26006	NM_018137	ENSG00000198890	PRMT6	HRMT1L6	protein arginine methyltransferase 6	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr1-3715	chr1	109726231	109727231	+	16	1000	"intron (NM_020775, intron 7 of 21)"	AluSp|SINE|Alu	-2440	NM_001284353	57535	Hs.708190	NM_020775	ENSG00000116299	KIAA1324	EIG121	KIAA1324	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-3716	chr1	109841637	109842637	+	16.6	1000	"intron (NM_001010985, intron 1 of 8)"	"intron (NM_001010985, intron 1 of 8)"	7526	NM_001010985	343263	Hs.443402	NM_001010985	ENSG00000221986	MYBPHL	-	myosin binding protein H like	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-3718	chr1	110064367	110065367	+	16.6	1000	Intergenic	Intergenic	-12531	NM_020703	57463	Hs.726479	NM_020703	ENSG00000181754	AMIGO1	ALI2|AMIGO|AMIGO-1	adhesion molecule with Ig like domain 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-3720	chr1	110437804	110438804	+	16.6	1000	Intergenic	L2c|LINE|L2	-14929	NM_000757	1435	Hs.173894	NM_000757	ENSG00000184371	CSF1	CSF-1|MCSF	colony stimulating factor 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-3724	chr1	110987887	110994602	+	110.1	6715	Intergenic	MIRb|SINE|MIR	-2544	NM_032414	84432	Hs.514793	NM_032414	ENSG00000143125	PROK1	EGVEGF|PK1|PRK1	prokineticin 1	protein-coding	110.09	24.75	4.448080808	9.04E-29
chr1-3727	chr1	111008037	111010362	+	37.8	2325	Intergenic	Intergenic	-14189	NR_003599	643160	Hs.532720	NR_003599	ENSG00000240194	CYMP	-	chymosin pseudogene	pseudo	37.76	5.82	6.487972509	1.70E-14
chr1-3729	chr1	111058161	111059161	+	16.6	1000	Intergenic	Intergenic	3136	NM_005549	3744	Hs.248140	NM_005549	ENSG00000143105	KCNA10	Kcn1|Kv1.8	potassium voltage-gated channel subfamily A member 10	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr1-3731	chr1	111145407	111152735	+	138.3	7328	promoter-TSS (NM_004974)	promoter-TSS (NM_004974)	-96	NM_004974	3737	Hs.248139	NM_004974	ENSG00000177301	KCNA2	EIEE32|HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2	potassium voltage-gated channel subfamily A member 2	protein-coding	138.26	16.5	8.379393939	1.76E-60
chr1-3737	chr1	112055618	112056618	+	16	1000	"intron (NM_001081976, intron 1 of 5)"	"intron (NM_001081976, intron 1 of 5)"	-9375	NM_001302678	140	Hs.281342	NM_000677	ENSG00000282608	ADORA3	A3AR	adenosine A3 receptor	protein-coding	16	3.4	4.705882353	2.25E-05
chr1-3738	chr1	112126984	112127984	+	16.6	1000	Intergenic	Intergenic	-20859	NM_001302680	57413	Hs.281342	NM_020683	ENSG00000121933	TMIGD3	AD026	transmembrane and immunoglobulin domain containing 3	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-3742	chr1	112500719	112503879	+	46.7	3160	"intron (NM_004980, intron 2 of 7)"	"intron (NM_004980, intron 2 of 7)"	29478	NM_172198	3752	Hs.666367	NM_004980	ENSG00000171385	KCND3	BRGDA9|KCND3L|KCND3S|KSHIVB|KV4.3|SCA19|SCA22	potassium voltage-gated channel subfamily D member 3	protein-coding	46.73	9.71	4.812564367	8.12E-14
chr1-3744	chr1	112506870	112510025	+	42.9	3155	"intron (NM_004980, intron 2 of 7)"	"intron (NM_004980, intron 2 of 7)"	23330	NM_172198	3752	Hs.666367	NM_004980	ENSG00000171385	KCND3	BRGDA9|KCND3L|KCND3S|KSHIVB|KV4.3|SCA19|SCA22	potassium voltage-gated channel subfamily D member 3	protein-coding	42.89	4.85	8.843298969	3.69E-20
chr1-3745	chr1	112706359	112708961	+	38.4	2602	Intergenic	Intergenic	174470	NM_001270945	643355	Hs.279714	NM_001270945		LINC01750	-	long intergenic non-protein coding RNA 1750	protein-coding	38.4	7.77	4.942084942	3.34E-12
chr1-3746	chr1	112815163	112816163	+	16.6	1000	Intergenic	MLT1L|LTR|ERVL-MaLR	-123137	NM_018704	55917	Hs.744100	NM_018704	ENSG00000143079	CTTNBP2NL	-	CTTNBP2 N-terminal like	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-3747	chr1	113255622	113257697	+	35.2	2075	"intron (NM_005167, intron 1 of 9)"	"intron (NM_005167, intron 1 of 9)"	1291	NM_005167	333926	Hs.655231	NM_005167	ENSG00000155367	PPM1J	PP2CZ|PP2Czeta|PPP2CZ	"protein phosphatase, Mg2+/Mn2+ dependent 1J"	protein-coding	35.2	5.34	6.5917603	9.27E-14
chr1-3751	chr1	115200679	115201679	+	16.6	1000	"intron (NM_001256404, intron 1 of 20)"	"intron (NM_001256404, intron 1 of 20)"	11553	NM_198459	163259	Hs.654928	NM_198459	ENSG00000175984	DENND2C	dJ1156J9.1	DENN domain containing 2C	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr1-3753	chr1	116427332	116428332	+	15.4	1000	Intergenic	AluSx1|SINE|Alu	-34165	NR_125969	101928995	Hs.559119	NR_125969	ENSG00000228127	LINC01649	-	long intergenic non-protein coding RNA 1649	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr1-3757	chr1	116548185	116549185	+	15.4	1000	"intron (NM_018420, intron 2 of 11)"	LTR82A|LTR|ERVL	-28788	NR_125970	101928977	Hs.627914	NR_125970		LOC101928977	-	uncharacterized LOC101928977	ncRNA	15.36	0.49	31.34693878	1.26E-14
chr1-3760	chr1	116852161	116853161	+	16.6	1000	Intergenic	Intergenic	-63134	NM_000701	476	Hs.371889	NM_000701	ENSG00000163399	ATP1A1	-	ATPase Na+/K+ transporting subunit alpha 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-3762	chr1	116907711	116908711	+	16	1000	Intergenic	Intergenic	-7584	NM_000701	476	Hs.371889	NM_000701	ENSG00000163399	ATP1A1	-	ATPase Na+/K+ transporting subunit alpha 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-3763	chr1	117018033	117019284	+	19.2	1251	"intron (NR_125973, intron 1 of 3)"	"intron (NR_125973, intron 1 of 3)"	2790	NR_125972	101929023	Hs.668091	NR_125972	ENSG00000233154	LINC01762	-	long intergenic non-protein coding RNA 1762	ncRNA	19.2	3.4	5.647058824	1.47E-07
chr1-3773	chr1	118143795	118144795	+	16	1000	"intron (NR_121626, intron 2 of 2)"	MIRc|SINE|MIR	4097	NR_121626	100996263	Hs.202533	NR_121626	ENSG00000236866	LOC100996263	-	uncharacterized LOC100996263	ncRNA	16	2.91	5.498281787	4.98E-06
chr1-3774	chr1	118534684	118535684	+	16.6	1000	"exon (NM_206996, exon 36 of 49)"	"exon (NM_206996, exon 36 of 49)"	62812	NM_006784	10885	Hs.310809	NM_006784	ENSG00000065183	WDR3	DIP2|UTP12	WD repeat domain 3	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr1-3787	chr1	145047808	145048808	+	16.6	1000	"intron (NM_022359, intron 1 of 6)"	L1PA5|LINE|L1	-8313	NM_001198832	9659	Hs.584841	NM_014644	ENSG00000178104	PDE4DIP	CMYA2|MMGL	phosphodiesterase 4D interacting protein	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-3798	chr1	146649222	146650222	+	16	1000	"non-coding (NR_002305, exon 1 of 1)"	"non-coding (NR_002305, exon 1 of 1)"	292	NR_002305	171423	Hs.658566	NR_002305		PDIA3P1	ERp60|GRP58P|PDIA3P	protein disulfide isomerase family A member 3 pseudogene 1	pseudo	16	2.91	5.498281787	4.98E-06
chr1-3801	chr1	147365390	147366390	+	16.6	1000	Intergenic	Intergenic	-9056	NM_005267	2703	Hs.632441	NM_005267	ENSG00000121634	GJA8	CAE|CAE1|CTRCT1|CX50|CZP1|MP70	gap junction protein alpha 8	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr1-3803	chr1	150521201	150522964	+	28.2	1763	"intron (NM_001288607, intron 1 of 19)"	CpG	237	NM_019032	54507	Hs.516243	NM_019032	ENSG00000143382	ADAMTSL4	ADAMTSL-4|ECTOL2|TSRC1	ADAMTS like 4	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr1-3805	chr1	151434992	151436618	+	25	1626	Intergenic	Intergenic	-3864	NM_001194938	23126	Hs.489873	NM_015100	ENSG00000143442	POGZ	MRD37|WHSUS|ZNF280E|ZNF635|ZNF635m	pogo transposable element with ZNF domain	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr1-3807	chr1	151849969	151850969	+	16.6	1000	"intron (NM_053055, intron 4 of 5)"	"intron (NM_053055, intron 4 of 5)"	-24296	NM_182578	284486	Hs.132648	NM_182578	ENSG00000196407	THEM5	ACOT15	thioesterase superfamily member 5	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-3811	chr1	152359671	152361274	+	25.6	1603	Intergenic	Intergenic	26278	NM_016190	49860	Hs.242057	NM_016190	ENSG00000143536	CRNN	C1orf10|DRC1|PDRC1|SEP53	cornulin	protein-coding	25.6	4.85	5.278350515	4.26E-09
chr1-3812	chr1	153336306	153339449	+	44.8	3143	Intergenic	Intergenic	7547	NM_002965	6280	Hs.112405	NM_002965	ENSG00000163220	S100A9	60B8AG|CAGB|CFAG|CGLB|L1AG|LIAG|MAC387|MIF|MRP14|NIF|P14	S100 calcium binding protein A9	protein-coding	44.81	6.8	6.589705882	1.33E-17
chr1-3813	chr1	153457304	153459270	+	30.7	1966	Intergenic	Intergenic	-25150	NM_002963	6278	Hs.112408	NM_002963	ENSG00000143556	S100A7	PSOR1|S100A7c	S100 calcium binding protein A7	protein-coding	30.72	4.37	7.029748284	3.82E-13
chr1-3815	chr1	153559131	153560131	+	16.6	1000	Intergenic	AluSx1|SINE|Alu	-21325	NM_005978	6273	Hs.516484	NM_005978	ENSG00000196754	S100A2	CAN19|S100L	S100 calcium binding protein A2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-3816	chr1	154732615	154734224	+	25.6	1609	"intron (NM_001204087, intron 3 of 8)"	CpG	98919	NM_170782	3782	Hs.490765	NM_002249	ENSG00000143603	KCNN3	KCa2.3|SK3|SKCA3|hSK3	potassium calcium-activated channel subfamily N member 3	protein-coding	25.6	3.4	7.529411765	9.95E-12
chr1-3821	chr1	154801119	154808600	+	105	7481	"intron (NM_002249, intron 1 of 7)"	"intron (NM_002249, intron 1 of 7)"	27479	NM_170782	3782	Hs.490765	NM_002249	ENSG00000143603	KCNN3	KCa2.3|SK3|SKCA3|hSK3	potassium calcium-activated channel subfamily N member 3	protein-coding	104.97	17.96	5.844654788	2.32E-35
chr1-3826	chr1	155050722	155055030	+	83.2	4308	"intron (NM_004952, intron 1 of 4)"	CpG	1528	NM_004952	1944	Hs.516656	NM_004952	ENSG00000143590	EFNA3	EFL2|EPLG3|Ehk1-L|LERK3	ephrin A3	protein-coding	83.21	11.65	7.14248927	3.41E-33
chr1-383	chr1	26487238	26489751	+	45.4	2513	"exon (NM_024869, exon 2 of 2)"	"exon (NM_024869, exon 2 of 2)"	2983	NM_024869	79927	Hs.694119	NM_024869	ENSG00000197245	FAM110D	GRRP1	family with sequence similarity 110 member D	protein-coding	45.45	7.77	5.849420849	6.82E-16
chr1-3830	chr1	156084185	156085499	+	27.5	1314	"exon (NM_001282626, exon 1 of 12)"	"exon (NM_001282626, exon 1 of 12)"	381	NM_001282626	4000	Hs.594444	NM_005572	ENSG00000160789	LMNA	CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1	lamin A/C	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr1-3831	chr1	156098025	156099025	+	16.6	1000	"intron (NM_001282624, intron 2 of 10)"	MIR3|SINE|MIR	2617	NM_001257374	4000	Hs.594444	NM_005572	ENSG00000160789	LMNA	CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1	lamin A/C	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr1-3832	chr1	156327053	156328053	+	15.4	1000	Intergenic	Intergenic	-11427	NM_020407	57127	Hs.131835	NM_020407	ENSG00000132677	RHBG	SLC42A2	Rh family B glycoprotein (gene/pseudogene)	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-3833	chr1	156362544	156363544	+	16	1000	Intergenic	Intergenic	24064	NR_046115	57127	Hs.131835	NM_020407	ENSG00000132677	RHBG	SLC42A2	Rh family B glycoprotein (gene/pseudogene)	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-3839	chr1	156624787	156626955	+	32	2168	"intron (NM_021948, intron 8 of 13)"	"intron (NM_021948, intron 8 of 13)"	14131	NM_198427	63827	Hs.516904	NM_021948	ENSG00000132692	BCAN	BEHAB|CSPG7	brevican	protein-coding	32	5.34	5.992509363	3.79E-12
chr1-3847	chr1	157060563	157061974	+	19.8	1411	TTS (NM_001004341)	TTS (NM_001004341)	8332	NM_001004341	440695	Hs.127138	NM_001004341	ENSG00000253831	ETV3L	-	ETS variant 3 like	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr1-3852	chr1	157957788	157958788	+	15.4	1000	Intergenic	Intergenic	-4775	NM_001286349	55243	Hs.272234	NM_018240	ENSG00000183853	KIRREL	NEPH1	kin of IRRE like (Drosophila)	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-3858	chr1	159403967	159405232	+	20.5	1265	Intergenic	MIRb|SINE|MIR	-4913	NM_012351	26476	Hs.532661	NM_012351	ENSG00000196184	OR10J1	HGMP07J|HSHGMP07J	olfactory receptor family 10 subfamily J member 1	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr1-386	chr1	39279501	39280771	+	26.9	1270	Intergenic	Intergenic	45359	NM_022157	64121	Hs.532461	NM_022157	ENSG00000116954	RRAGC	GTR2|RAGC|TIB929	Ras related GTP binding C	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr1-3860	chr1	159823407	159826304	+	57	2897	"intron (NM_001013661, intron 6 of 6)"	CpG	282	NM_001134233	284677	Hs.647718	NM_001134233	ENSG00000188004	C1orf204	-	chromosome 1 open reading frame 204	protein-coding	56.97	7.28	7.825549451	2.40E-24
chr1-3867	chr1	161236257	161237257	+	16	1000	"intron (NM_001102566, intron 1 of 2)"	"intron (NM_001102566, intron 1 of 2)"	8240	NM_001102566	654790	Hs.433150	NM_001102566	ENSG00000248485	PCP4L1	IQM1	Purkinje cell protein 4 like 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-3873	chr1	161708742	161710089	+	21.1	1347	Intergenic	Intergenic	-10143	NM_007240	11266	Hs.416216	NM_007240	ENSG00000081721	DUSP12	DUSP1|YVH1	dual specificity phosphatase 12	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr1-3875	chr1	162038085	162041601	+	49.3	3516	"5' UTR (NM_001164757, exon 1 of 10)"	"5' UTR (NM_001164757, exon 1 of 10)"	262	NM_014697	9722	Hs.731942	NM_014697	ENSG00000198929	NOS1AP	6330408P19Rik|CAPON	nitric oxide synthase 1 adaptor protein	protein-coding	49.29	11.16	4.416666667	2.21E-13
chr1-3876	chr1	162074561	162075561	+	14.7	1000	"intron (NM_014697, intron 1 of 9)"	L1PA11|LINE|L1	35480	NM_014697	9722	Hs.731942	NM_014697	ENSG00000198929	NOS1AP	6330408P19Rik|CAPON	nitric oxide synthase 1 adaptor protein	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-3878	chr1	162901933	162904093	+	31.4	2160	Intergenic	Intergenic	-64408	NM_178550	339512	Hs.407631	NM_178550	ENSG00000185860	CCDC190	C1orf110	coiled-coil domain containing 190	protein-coding	31.36	6.31	4.969889065	6.13E-10
chr1-3880	chr1	163414773	163415773	+	16.6	1000	Intergenic	Intergenic	-22292	NR_104294	100422212	Hs.556898	NR_104294		LOC100422212	-	eukaryotic translation initiation factor 3 subunit J pseudogene	pseudo	16.64	0.97	17.15463918	2.06E-12
chr1-3882	chr1	164753253	164756471	+	41	3218	"intron (NM_001204963, intron 2 of 8)"	"intron (NM_001204963, intron 2 of 8)"	-10984	NR_038072	100505795	Hs.661039	NR_038072	ENSG00000233693	LOC100505795	-	uncharacterized LOC100505795	ncRNA	40.97	5.82	7.0395189	5.30E-17
chr1-3883	chr1	165085999	165086999	+	16.6	1000	Intergenic	Intergenic	238979	NM_001174069	4009	Hs.667312	NM_177398	ENSG00000162761	LMX1A	LMX1|LMX1.1	LIM homeobox transcription factor 1 alpha	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr1-3888	chr1	165536419	165537756	+	20.5	1337	"intron (NR_026744, intron 3 of 6)"	L2c|LINE|L2	14305	NR_026744	400794	Hs.374847	NR_026744	ENSG00000237463	LOC400794	-	uncharacterized LOC400794	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr1-3891	chr1	171219632	171220632	+	16	1000	"intron (NM_001282694, intron 1 of 7)"	LTR22B|LTR|ERVK	2522	NM_001282694	2326	Hs.1424	NM_002021	ENSG00000010932	FMO1	-	flavin containing monooxygenase 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-3892	chr1	172634080	172635422	+	21.1	1342	"intron (NM_001302746, intron 2 of 2)"	"intron (NM_001302746, intron 2 of 2)"	6603	NM_000639	356	Hs.2007	NM_000639	ENSG00000117560	FASLG	ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A	Fas ligand	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr1-3893	chr1	172637329	172639478	+	33.3	2149	Intergenic	Intergenic	10255	NM_000639	356	Hs.2007	NM_000639	ENSG00000117560	FASLG	ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A	Fas ligand	protein-coding	33.28	5.82	5.718213058	4.04E-12
chr1-3895	chr1	175172824	175175037	+	34.6	2213	Intergenic	Intergenic	-11701	NM_001162894	9674	Hs.518138	NM_014656	ENSG00000235750	KIAA0040	-	KIAA0040	protein-coding	34.56	4.85	7.125773196	1.02E-14
chr1-3901	chr1	178914786	178916036	+	17.9	1250	Intergenic	Intergenic	-75196	NM_004673	9068	Hs.591474	NM_004673	ENSG00000116194	ANGPTL1	ANG3|ANGPT3|ARP1|AngY|UNQ162|dJ595C2.2	angiopoietin like 1	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr1-3903	chr1	179753299	179754299	+	16.6	1000	"intron (NM_001329719, intron 1 of 4)"	"intron (NM_001329719, intron 1 of 4)"	41501	NM_001329719	148753	Hs.400696	NM_173509	ENSG00000143340	FAM163A	C1orf76|NDSP	family with sequence similarity 163 member A	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr1-3905	chr1	179793815	179794815	+	16	1000	Intergenic	Intergenic	52626	NM_022347	163590	Hs.571797	NM_022347	ENSG00000169905	TOR1AIP2	IFRG15|LULL1|NET9	torsin 1A interacting protein 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-3909	chr1	181240263	181241263	+	16	1000	Intergenic	Intergenic	35239	NR_046249	100287948	Hs.742594	NR_046249	ENSG00000179452	LINC01699	GM140	long intergenic non-protein coding RNA 1699	ncRNA	16	1.94	8.24742268	7.67E-08
chr1-3910	chr1	181285799	181286799	+	15.4	1000	Intergenic	Intergenic	80775	NR_046249	100287948	Hs.742594	NR_046249	ENSG00000179452	LINC01699	GM140	long intergenic non-protein coding RNA 1699	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr1-3911	chr1	181460392	181461392	+	16.6	1000	"intron (NM_001205294, intron 1 of 45)"	"intron (NM_001205294, intron 1 of 45)"	8206	NM_001205294	777	Hs.437444	NM_000721	ENSG00000198216	CACNA1E	BII|CACH6|CACNL1A6|Cav2.3|gm139	calcium voltage-gated channel subunit alpha1 E	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-3919	chr1	182746063	182747063	+	16.6	1000	Intergenic	Intergenic	-12021	NM_001200052	80896	Hs.496969	NM_030769	ENSG00000135838	NPL	C112|C1orf13|NAL|NPL1	N-acetylneuraminate pyruvate lyase	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr1-3920	chr1	182760554	182761554	+	16	1000	"intron (NM_001200050, intron 1 of 10)"	"intron (NM_001200050, intron 1 of 10)"	2470	NM_001200050	80896	Hs.496969	NM_030769	ENSG00000135838	NPL	C112|C1orf13|NAL|NPL1	N-acetylneuraminate pyruvate lyase	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-3921	chr1	182997296	182998296	+	16	1000	"intron (NM_002293, intron 1 of 27)"	"intron (NM_002293, intron 1 of 27)"	5201	NM_002293	3915	Hs.609663	NM_002293	ENSG00000135862	LAMC1	LAMB2	laminin subunit gamma 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-3922	chr1	183020453	183021453	+	16.6	1000	"intron (NM_002293, intron 1 of 27)"	"intron (NM_002293, intron 1 of 27)"	28358	NM_002293	3915	Hs.609663	NM_002293	ENSG00000135862	LAMC1	LAMB2	laminin subunit gamma 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-3923	chr1	183093883	183095842	+	32.6	1959	"intron (NM_002293, intron 15 of 27)"	"intron (NM_002293, intron 15 of 27)"	-60312	NM_005562	3918	Hs.591484	NM_005562	ENSG00000058085	LAMC2	B2T|BM600|CSF|EBR2|EBR2A|LAMB2T|LAMNB2	laminin subunit gamma 2	protein-coding	32.64	6.31	5.17274168	1.20E-10
chr1-3927	chr1	184963059	184964059	+	16	1000	Intergenic	L1M4c|LINE|L1	-19841	NM_052966	116496	Hs.518662	NM_052966	ENSG00000135842	FAM129A	C1orf24|GIG39|NIBAN	family with sequence similarity 129 member A	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-3928	chr1	185523335	185524335	+	15.4	1000	Intergenic	MIRc|SINE|MIR	73785	NR_110793	101929093	Hs.535227	NR_110793	ENSG00000228309	LINC01350	GS1-204I12.1	long intergenic non-protein coding RNA 1350	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr1-3930	chr1	199908207	199909581	+	17.3	1374	Intergenic	L1ME3C|LINE|L1	-87836	NM_003822	2494	Hs.33446	NM_003822	ENSG00000116833	NR5A2	B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2	nuclear receptor subfamily 5 group A member 2	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr1-3931	chr1	199997480	200001260	+	62.1	3780	"intron (NM_003822, intron 1 of 6)"	"intron (NM_003822, intron 1 of 6)"	2640	NM_205860	2494	Hs.33446	NM_003822	ENSG00000116833	NR5A2	B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2	nuclear receptor subfamily 5 group A member 2	protein-coding	62.09	11.65	5.329613734	1.19E-19
chr1-3939	chr1	200442273	200443666	+	20.5	1393	Intergenic	Intergenic	-63783	NM_012482	23528	Hs.59757	NM_012482	ENSG00000162702	ZNF281	ZBP-99|ZNP-99	zinc finger protein 281	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr1-3941	chr1	201065552	201066552	+	17.3	1000	"intron (NM_000069, intron 2 of 43)"	"intron (NM_000069, intron 2 of 43)"	15642	NM_000069	779	Hs.1294	NM_000069	ENSG00000081248	CACNA1S	CACNL1A3|CCHL1A3|Cav1.1|HOKPP|HOKPP1|MHS5|TTPP1|hypoPP	calcium voltage-gated channel subunit alpha1 S	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr1-3947	chr1	201608222	201609222	+	16	1000	Intergenic	Intergenic	-8728	NM_020443	89796	Hs.585374	NM_020443	ENSG00000134369	NAV1	POMFIL3|STEERIN1|UNC53H1	neuron navigator 1	protein-coding	16	0	16.4818808	1.26E-14
chr1-3952	chr1	202198264	202199264	+	16.6	1000	"intron (NM_001017404, intron 3 of 15)"	"intron (NM_001017404, intron 3 of 15)"	15481	NM_001017404	59352	Hs.497402	NM_021636	ENSG00000133067	LGR6	GPCR|VTS20631	leucine rich repeat containing G protein-coupled receptor 6	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-3953	chr1	202236824	202238767	+	33.9	1943	"intron (NM_001017404, intron 4 of 15)"	"intron (NM_001017404, intron 4 of 15)"	54512	NM_001017404	59352	Hs.497402	NM_021636	ENSG00000133067	LGR6	GPCR|VTS20631	leucine rich repeat containing G protein-coupled receptor 6	protein-coding	33.92	5.82	5.828178694	4.04E-12
chr1-3956	chr1	202612286	202616387	+	66.6	4101	"intron (NM_177402, intron 1 of 8)"	"intron (NM_177402, intron 1 of 8)"	-1755	NM_001136504	127833	Hs.25422	NM_177402	ENSG00000143858	SYT2	CMS7|MYSPC|SytII	synaptotagmin 2	protein-coding	66.57	6.31	10.54992076	1.04E-34
chr1-3957	chr1	202644960	202645960	+	16	1000	"intron (NM_177402, intron 1 of 8)"	"intron (NM_177402, intron 1 of 8)"	-32879	NM_001136504	127833	Hs.25422	NM_177402	ENSG00000143858	SYT2	CMS7|MYSPC|SytII	synaptotagmin 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr1-3959	chr1	203004928	203006273	+	20.5	1345	"intron (NM_001304331, intron 1 of 29)"	"intron (NM_001304331, intron 1 of 29)"	9951	NM_001304331	8497	Hs.153648	NM_015053	ENSG00000143847	PPFIA4	-	PTPRF interacting protein alpha 4	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr1-3960	chr1	203012244	203013498	+	19.8	1254	"intron (NM_001304331, intron 3 of 29)"	MamRep38|DNA|hAT	17222	NM_001304331	8497	Hs.153648	NM_015053	ENSG00000143847	PPFIA4	-	PTPRF interacting protein alpha 4	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr1-3964	chr1	203128326	203129326	+	16.6	1000	"intron (NM_001048230, intron 2 of 2)"	L2a|LINE|L2	16116	NM_004997	4608	Hs.927	NM_004997	ENSG00000133055	MYBPH	-	myosin binding protein H	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-3969	chr1	203202236	203203236	+	15.4	1000	Intergenic	Intergenic	-3876	NR_045785	1118	Hs.201688	NM_003465	ENSG00000133063	CHIT1	CHI3|CHIT|CHITD	chitinase 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-3970	chr1	203250400	203251400	+	16.6	1000	Intergenic	L2c|LINE|L2	-5380	NR_117097	100506775	Hs.443859	NR_117097	ENSG00000231507	LINC01353	-	long intergenic non-protein coding RNA 1353	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr1-3975	chr1	203332550	203333550	+	15.4	1000	Intergenic	Intergenic	-12493	NR_103757	2331	Hs.519168	NM_002023	ENSG00000122176	FMOD	FM|SLRR2E	fibromodulin	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-3978	chr1	203490267	203491267	+	16.6	1000	Intergenic	MIRb|SINE|MIR	27496	NM_014359	26254	Hs.632468	NM_014359	ENSG00000188770	OPTC	OPT	opticin	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-3979	chr1	204099984	204101287	+	24.3	1303	"3' UTR (NM_001297760, exon 8 of 8)"	"3' UTR (NM_001297760, exon 8 of 8)"	-9901	NR_123739	101929441	Hs.736889	NR_123739	ENSG00000230550	LOC101929441	-	uncharacterized LOC101929441	ncRNA	24.32	1.94	12.53608247	5.33E-15
chr1-3980	chr1	204228330	204229330	+	16.6	1000	"exon (NM_014935, exon 8 of 23)"	"exon (NM_014935, exon 8 of 23)"	-45610	NM_198447	127845	Hs.532401	NM_198447	ENSG00000174567	GOLT1A	CGI-141|GOT1|HMFN1187|YMR292W|hGOT1b	golgi transport 1A	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-3981	chr1	204244371	204245629	+	17.3	1258	"intron (NM_014935, intron 1 of 22)"	"intron (NM_014935, intron 1 of 22)"	-61780	NM_198447	127845	Hs.532401	NM_198447	ENSG00000174567	GOLT1A	CGI-141|GOT1|HMFN1187|YMR292W|hGOT1b	golgi transport 1A	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-3983	chr1	204280763	204281763	+	16.6	1000	"intron (NM_014935, intron 1 of 22)"	MIRb|SINE|MIR	47794	NM_014935	22874	Hs.253146	NM_014935	ENSG00000143850	PLEKHA6	PEPP-3|PEPP3	pleckstrin homology domain containing A6	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr1-3987	chr1	204584693	204587144	+	42.2	2451	TTS (NM_006338)	TTS (NM_006338)	68563	NM_006338	10446	Hs.26312	NM_006338	ENSG00000170382	LRRN2	FIGLER7|GAC1|LRANK1|LRRN5	leucine rich repeat neuronal 2	protein-coding	42.25	6.8	6.213235294	5.66E-16
chr1-3990	chr1	204743287	204744287	+	16.6	1000	Intergenic	ERVL-E-int|LTR|ERVL	-53995	NM_015090	23114	Hs.13349	NM_015090	ENSG00000163531	NFASC	NF|NRCAML	neurofascin	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr1-3992	chr1	204904493	204907582	+	48.6	3089	"intron (NM_001160332, intron 2 of 27)"	L2a|LINE|L2	-7317	NM_001160331	23114	Hs.13349	NM_015090	ENSG00000163531	NFASC	NF|NRCAML	neurofascin	protein-coding	48.65	9.71	5.010298661	3.28E-15
chr1-3993	chr1	204918809	204919809	+	16.6	1000	"intron (NM_001160331, intron 1 of 26)"	"intron (NM_001160331, intron 1 of 26)"	5955	NM_001160331	23114	Hs.13349	NM_015090	ENSG00000163531	NFASC	NF|NRCAML	neurofascin	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-3994	chr1	204926155	204928551	+	32.6	2396	"intron (NM_001160333, intron 7 of 14)"	"intron (NM_001160333, intron 7 of 14)"	13999	NM_001160331	23114	Hs.13349	NM_015090	ENSG00000163531	NFASC	NF|NRCAML	neurofascin	protein-coding	32.64	7.28	4.483516484	2.08E-09
chr1-3995	chr1	204964357	204968036	+	53.1	3679	"intron (NM_001160331, intron 24 of 26)"	"intron (NM_001160331, intron 24 of 26)"	-45869	NM_001346083	6900	Hs.519220	NM_005076	ENSG00000184144	CNTN2	AXT|FAME5|TAG-1|TAX|TAX1	contactin 2	protein-coding	53.13	7.77	6.837837838	1.02E-20
chr1-3998	chr1	204987866	204988866	+	16	1000	"3' UTR (NM_001005388, exon 30 of 30)"	"3' UTR (NM_001005388, exon 30 of 30)"	-23699	NM_001346083	6900	Hs.519220	NM_005076	ENSG00000184144	CNTN2	AXT|FAME5|TAG-1|TAX|TAX1	contactin 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-4000	chr1	205027416	205028935	+	21.8	1519	"intron (NR_144350, intron 5 of 22)"	"intron (NR_144350, intron 5 of 22)"	15923	NR_144350	6900	Hs.519220	NM_005076	ENSG00000184144	CNTN2	AXT|FAME5|TAG-1|TAX|TAX1	contactin 2	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr1-4001	chr1	205033479	205034479	+	15.4	1000	"intron (NR_144350, intron 12 of 22)"	"intron (NR_144350, intron 12 of 22)"	19609	NM_203376	388730	Hs.146928	NM_203376	ENSG00000174529	TMEM81	HC3107|KVLA2788|UNQ2788	transmembrane protein 81	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4004	chr1	205517022	205518022	+	16	1000	Intergenic	Intergenic	8241	NR_027086	284578	Hs.537020	NR_027086		LOC284578	-	uncharacterized LOC284578	ncRNA	16	3.88	4.12371134	7.91E-05
chr1-4008	chr1	207121742	207122742	+	16	1000	Intergenic	Intergenic	-2431	NM_002644	5284	Hs.497589	NM_002644	ENSG00000162896	PIGR	-	polymeric immunoglobulin receptor	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-4009	chr1	207145539	207146539	+	16	1000	Intergenic	Intergenic	-2069	NM_001122979	83953	Hs.145519	NM_032029	ENSG00000162897	FCAMR	CD351|FCA/MR|FKSG87	Fc fragment of IgA and IgM receptor	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-4011	chr1	207580558	207581558	+	16.6	1000	Intergenic	Intergenic	-46587	NM_001006658	1380	Hs.445757	NM_001877	ENSG00000117322	CR2	C3DR|CD21|CR|CVID7|SLEB9	complement C3d receptor 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-4012	chr1	207758136	207759136	+	16	1000	"intron (NM_000651, intron 33 of 46)"	"intron (NM_000651, intron 33 of 46)"	-59822	NM_175710	1379	Hs.628568	NM_175710	ENSG00000197721	CR1L	-	complement C3b/C4b receptor 1 like	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-4016	chr1	208212913	208213913	+	16	1000	"intron (NM_025179, intron 22 of 31)"	"intron (NM_025179, intron 22 of 31)"	-128730	NM_001773	947	Hs.374990	NM_001773	ENSG00000174059	CD34	-	CD34 molecule	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-4017	chr1	208230888	208232764	+	31.4	1876	"intron (NM_025179, intron 13 of 31)"	"intron (NM_025179, intron 13 of 31)"	-147143	NM_001773	947	Hs.374990	NM_001773	ENSG00000174059	CD34	-	CD34 molecule	protein-coding	31.36	6.31	4.969889065	6.13E-10
chr1-4019	chr1	208300708	208301708	+	16.6	1000	"intron (NM_025179, intron 4 of 31)"	"intron (NM_025179, intron 4 of 31)"	116457	NM_025179	5362	Hs.497626	NM_025179	ENSG00000076356	PLXNA2	OCT|PLXN2	plexin A2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-4025	chr1	208726682	208727682	+	16	1000	Intergenic	Intergenic	-309517	NM_025179	5362	Hs.497626	NM_025179	ENSG00000076356	PLXNA2	OCT|PLXN2	plexin A2	protein-coding	16	3.4	4.705882353	2.25E-05
chr1-4027	chr1	209762519	209763519	+	16.6	1000	"intron (NM_020439, intron 1 of 12)"	L2c|LINE|L2	5974	NM_020439	57172	Hs.199068	NM_020439	ENSG00000008118	CAMK1G	CLICK3|CLICKIII|VWS1|dJ272L16.1	calcium/calmodulin dependent protein kinase IG	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-4029	chr1	209906757	209907757	+	16.6	1000	"intron (NM_181755, intron 6 of 6)"	"intron (NM_181755, intron 6 of 6)"	8650	NR_134510	101930114	Hs.663934	NR_134509	ENSG00000227591	LOC101930114	-	uncharacterized LOC101930114	ncRNA	16.64	0.49	33.95918367	3.68E-16
chr1-4030	chr1	209973658	209975474	+	31.4	1816	"intron (NM_001206696, intron 1 of 6)"	"intron (NM_001206696, intron 1 of 6)"	4954	NM_001206696	3664	Hs.591415	NM_006147	ENSG00000117595	IRF6	LPS|OFC6|PIT|PPS|PPS1|VWS|VWS1	interferon regulatory factor 6	protein-coding	31.36	5.82	5.388316151	1.29E-10
chr1-4032	chr1	210576642	210577642	+	16	1000	"intron (NM_001122834, intron 5 of 11)"	L1ME4a|LINE|L1	74502	NM_001170580	55733	Hs.58650	NM_018194	ENSG00000054392	HHAT	MART2|SKI1|Skn	hedgehog acyltransferase	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-4033	chr1	210871500	210872500	+	16.6	1000	"intron (NM_172362, intron 10 of 10)"	MIRb|SINE|MIR	369360	NM_001170580	55733	Hs.58650	NM_018194	ENSG00000054392	HHAT	MART2|SKI1|Skn	hedgehog acyltransferase	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-4036	chr1	212696144	212697144	+	15.4	1000	Intergenic	L2c|LINE|L2	-22392	NR_125985	101929565		NR_125985	ENSG00000228067	LINC01740	-	long intergenic non-protein coding RNA 1740	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr1-4039	chr1	213567366	213569124	+	25	1758	Intergenic	Intergenic	343670	NM_001287219	26750	Hs.591416	NM_012424	ENSG00000136643	RPS6KC1	RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1	ribosomal protein S6 kinase C1	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr1-4044	chr1	217262936	217263936	+	16.6	1000	promoter-TSS (NM_001243505)	promoter-TSS (NM_001243505)	-240	NM_001243505	2104	Hs.444225	NM_001438	ENSG00000196482	ESRRG	ERR3|ERRgamma|NR3B3	estrogen related receptor gamma	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr1-4048	chr1	223522378	223523378	+	16	1000	"intron (NM_001037175, intron 2 of 5)"	"intron (NM_001037175, intron 2 of 5)"	14666	NM_017982	55061	Hs.497841	NM_017982	ENSG00000143502	SUSD4	PRO222	sushi domain containing 4	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-4049	chr1	223532151	223533151	+	16.6	1000	"intron (NM_001037175, intron 2 of 5)"	"intron (NM_001037175, intron 2 of 5)"	4893	NM_017982	55061	Hs.497841	NM_017982	ENSG00000143502	SUSD4	PRO222	sushi domain containing 4	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-4051	chr1	224264454	224265775	+	19.8	1321	Intergenic	Intergenic	-36675	NR_049764	23219	Hs.64691	NM_015176	ENSG00000143756	FBXO28	CENP-30|Fbx28	F-box protein 28	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr1-4052	chr1	224767836	224768836	+	16.6	1000	"intron (NR_136297, intron 2 of 6)"	AluSc5|SINE|Alu	-35843	NM_001322305	149111	Hs.731723	NM_152495	ENSG00000143786	CNIH3	CNIH-3	cornichon family AMPA receptor auxiliary protein 3	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr1-4055	chr1	224863181	224864181	+	16	1000	"intron (NR_136287, intron 1 of 4)"	L1ME1|LINE|L1	59502	NM_152495	149111	Hs.731723	NM_152495	ENSG00000143786	CNIH3	CNIH-3	cornichon family AMPA receptor auxiliary protein 3	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-4056	chr1	224934143	224935143	+	16.6	1000	Intergenic	Intergenic	130464	NM_152495	149111	Hs.731723	NM_152495	ENSG00000143786	CNIH3	CNIH-3	cornichon family AMPA receptor auxiliary protein 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-4063	chr1	226759090	226760356	+	17.9	1266	"intron (NM_001003665, intron 1 of 3)"	"intron (NM_001003665, intron 1 of 3)"	23222	NM_001003665	375057	Hs.116827	NM_001003665	ENSG00000203685	STUM	C1orf95	"stum, mechanosensory transduction mediator homolog"	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr1-4065	chr1	226789626	226790626	+	16	1000	"3' UTR (NM_001003665, exon 4 of 4)"	"3' UTR (NM_001003665, exon 4 of 4)"	53625	NM_001003665	375057	Hs.116827	NM_001003665	ENSG00000203685	STUM	C1orf95	"stum, mechanosensory transduction mediator homolog"	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-4069	chr1	228109393	228111035	+	25	1642	"intron (NM_003395, intron 3 of 3)"	"intron (NM_003395, intron 3 of 3)"	19170	NR_049806	100847072		NR_049806	ENSG00000264483	MIR5008	-	microRNA 5008	ncRNA	24.96	1.94	12.86597938	5.33E-15
chr1-4071	chr1	228204736	228205736	+	15.4	1000	"intron (NM_033131, intron 1 of 3)"	AluJo|SINE|Alu	10513	NM_033131	89780	Hs.336930	NM_033131	ENSG00000154342	WNT3A	-	Wnt family member 3A	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-4072	chr1	228616145	228617145	+	15.4	1000	Intergenic	Intergenic	-3619	NM_003493	8290	Hs.248171	NM_003493	ENSG00000168148	HIST3H3	H3.4|H3/g|H3FT|H3t	histone cluster 3 H3	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-4076	chr1	230623158	230624158	+	16	1000	Intergenic	Intergenic	-61984	NM_001258311	79605	Hs.520463	NM_024554	ENSG00000177614	PGBD5	-	piggyBac transposable element derived 5	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-4078	chr1	230851326	230852601	+	19.8	1275	Intergenic	Intergenic	-1627	NM_000029	183	Hs.19383	NM_000029	ENSG00000135744	AGT	ANHU|SERPINA8	angiotensinogen	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr1-4081	chr1	233569088	233570088	+	16	1000	Intergenic	Intergenic	106074	NM_032435	84451	Hs.547779	NM_032435	ENSG00000143674	MAP3K21	KIAA1804|MLK4|dJ862P8.3	mitogen-activated protein kinase kinase kinase 21	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-4082	chr1	233670353	233671353	+	14.1	1000	Intergenic	LTR9|LTR|ERV1	-78897	NM_002245	3775	Hs.208544	NM_002245	ENSG00000135750	KCNK1	DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1	potassium two pore domain channel subfamily K member 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr1-4086	chr1	234989305	234990305	+	16	1000	Intergenic	AluSz|SINE|Alu	109941	NR_125945	101927851	Hs.520684	NR_125945	ENSG00000238005	LOC101927851	-	uncharacterized LOC101927851	ncRNA	16	2.91	5.498281787	4.98E-06
chr1-4091	chr1	236837591	236839713	+	32	2122	Intergenic	Intergenic	-11102	NM_001278344	88	Hs.498178	NM_001103	ENSG00000077522	ACTN2	CMD1AA|CMH23	actinin alpha 2	protein-coding	32	5.82	5.498281787	2.32E-11
chr1-4094	chr1	239563223	239564223	+	16	1000	"intron (NM_001347716, intron 1 of 7)"	L1MA8|LINE|L1	13493	NM_001347716	1131	Hs.7138	NM_000740	ENSG00000133019	CHRM3	EGBRS|HM3|PBS	cholinergic receptor muscarinic 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-4095	chr1	242886672	242887954	+	19.2	1282	Intergenic	Intergenic	-199315	NM_001320272	200150	Hs.672452	NM_152666	ENSG00000180287	PLD5	PLDC	phospholipase D family member 5	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr1-4096	chr1	244077831	244080521	+	35.2	2690	Intergenic	Intergenic	-1528	NR_033883	339529	Hs.209374	NR_033883	ENSG00000226828	LOC339529	-	uncharacterized LOC339529	ncRNA	35.2	8.25	4.266666667	1.34E-09
chr1-4100	chr1	245603559	245604559	+	14.7	1000	"intron (NM_018012, intron 4 of 14)"	"intron (NM_018012, intron 4 of 14)"	285772	NM_018012	55083	Hs.143134	NM_018012	ENSG00000162849	KIF26B	-	kinesin family member 26B	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-4101	chr1	247384924	247385924	+	16.6	1000	Intergenic	(TTTG)n|Simple_repeat|Simple_repeat	-20062	NR_037480	100500849		NR_037480		MIR3916	mir-3916	microRNA 3916	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr1-4102	chr1	908694	909694	+	15.4	1000	"intron (NM_032129, intron 13 of 15)"	"intron (NM_032129, intron 13 of 15)"	7317	NM_032129	84069	Hs.528691	NM_032129	ENSG00000187583	PLEKHN1	-	pleckstrin homology domain containing N1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-4103	chr1	922678	923678	+	16	1000	Intergenic	AluSx1|SINE|Alu	-5681	NM_001291367	84808	Hs.271462	NM_032722	ENSG00000187642	PERM1	C1orf170	"PPARGC1 and ESRR induced regulator, muscle 1"	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-4104	chr1	955833	957671	+	28.8	1838	"intron (NM_198576, intron 1 of 35)"	"intron (NM_198576, intron 1 of 35)"	1249	NM_001305275	375790	Hs.273330	NM_198576	ENSG00000188157	AGRN	CMS8|CMSPPD	agrin	protein-coding	28.8	3.88	7.422680412	1.97E-12
chr1-4109	chr1	1893284	1897428	+	66.6	4144	"intron (NM_001304360, intron 13 of 38)"	"intron (NM_001304360, intron 13 of 38)"	39920	NM_001304360	85452	Hs.232092	NM_001003808	ENSG00000142609	CFAP74	C1orf222|KIAA1751	cilia and flagella associated protein 74	protein-coding	66.57	7.77	8.567567568	1.68E-30
chr1-4112	chr1	2008801	2009801	+	14.7	1000	"intron (NM_001242874, intron 1 of 14)"	HAL1|LINE|L1	3876	NM_001242874	5590	Hs.496255	NM_002744	ENSG00000067606	PRKCZ	PKC-ZETA|PKC2	protein kinase C zeta	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-4113	chr1	2015948	2016948	+	14.1	1000	"intron (NM_001242874, intron 1 of 14)"	AluJr|SINE|Alu	11023	NM_001242874	5590	Hs.496255	NM_002744	ENSG00000067606	PRKCZ	PKC-ZETA|PKC2	protein kinase C zeta	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr1-4114	chr1	2019320	2021830	+	44.2	2510	"intron (NM_001242874, intron 1 of 14)"	"intron (NM_001242874, intron 1 of 14)"	15150	NM_001242874	5590	Hs.496255	NM_002744	ENSG00000067606	PRKCZ	PKC-ZETA|PKC2	protein kinase C zeta	protein-coding	44.17	7.77	5.684684685	3.96E-15
chr1-4119	chr1	2108673	2109673	+	16	1000	"intron (NM_001033581, intron 13 of 14)"	"intron (NM_001033581, intron 13 of 14)"	17041	NM_001282671	199990	Hs.107101	NM_182533	ENSG00000162585	FAAP20	C1orf86|FP7162	Fanconi anemia core complex associated protein 20	protein-coding	16	0.97	16.49484536	3.54E-11
chr1-4120	chr1	2281938	2288761	+	98.6	6823	"intron (NM_024848, intron 10 of 13)"	"intron (NM_024848, intron 10 of 13)"	-1249	NR_024489	100129534	Hs.655313	NM_001127577	ENSG00000269896	LOC100129534	-	small nuclear ribonucleoprotein polypeptide N pseudogene	pseudo	98.57	21.84	4.513278388	2.52E-26
chr1-4126	chr1	2584749	2585749	+	15.4	1000	"intron (NM_001242672, intron 4 of 6)"	"intron (NM_001242672, intron 4 of 6)"	-20768	NM_033467	79258	Hs.591453	NM_033467	ENSG00000142606	MMEL1	MMEL2|NEP2|NEPII|NL1|NL2|SEP	membrane metalloendopeptidase like 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-4128	chr1	2732549	2733549	+	16	1000	Intergenic	AluJb|SINE|Alu	-26819	NM_001242672	100287898	Hs.632363	NM_001242672	ENSG00000215912	TTC34	-	tetratricopeptide repeat domain 34	protein-coding	16	1.46	10.95890411	3.44E-09
chr1-4130	chr1	2778431	2779431	+	15.4	1000	Intergenic	Intergenic	-72701	NM_001242672	100287898	Hs.632363	NM_001242672	ENSG00000215912	TTC34	-	tetratricopeptide repeat domain 34	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-4132	chr1	2822124	2823124	+	16	1000	Intergenic	Intergenic	-115422	NM_080431	140625	Hs.236635	NM_080431	ENSG00000169717	ACTRT2	ARPM2|ARPT2|Arp-T2|HARPM2	actin related protein T2	protein-coding	16	0	16.4818808	1.26E-14
chr1-4133	chr1	2826034	2827034	+	16	1000	Intergenic	Intergenic	-111512	NM_080431	140625	Hs.236635	NM_080431	ENSG00000169717	ACTRT2	ARPM2|ARPT2|Arp-T2|HARPM2	actin related protein T2	protein-coding	16	0.97	16.49484536	3.54E-11
chr1-4134	chr1	2835700	2837316	+	23.7	1616	Intergenic	Intergenic	-101538	NM_080431	140625	Hs.236635	NM_080431	ENSG00000169717	ACTRT2	ARPM2|ARPT2|Arp-T2|HARPM2	actin related protein T2	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr1-4135	chr1	2843817	2849609	+	83.9	5792	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-91333	NM_080431	140625	Hs.236635	NM_080431	ENSG00000169717	ACTRT2	ARPM2|ARPT2|Arp-T2|HARPM2	actin related protein T2	protein-coding	83.85	15.53	5.399227302	2.29E-26
chr1-4139	chr1	2908586	2909586	+	15.4	1000	Intergenic	L1ME3A|LINE|L1	-28960	NM_080431	140625	Hs.236635	NM_080431	ENSG00000169717	ACTRT2	ARPM2|ARPT2|Arp-T2|HARPM2	actin related protein T2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-4141	chr1	3008160	3009709	+	28.8	1549	"intron (NM_199454, intron 1 of 16)"	"intron (NM_199454, intron 1 of 16)"	23192	NM_199454	63976	Hs.99500	NM_022114	ENSG00000142611	PRDM16	CMD1LL|KMT8F|LVNC8|MEL1|PFM13	PR/SET domain 16	protein-coding	28.8	5.34	5.393258427	7.39E-10
chr1-4147	chr1	3140478	3141478	+	15.4	1000	"intron (NM_199454, intron 2 of 16)"	"intron (NM_199454, intron 2 of 16)"	96439	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr1-4148	chr1	3143265	3148671	+	78.7	5406	"intron (NM_199454, intron 2 of 16)"	"intron (NM_199454, intron 2 of 16)"	101429	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	78.73	15.05	5.231229236	3.65E-24
chr1-4149	chr1	3191951	3192951	+	16	1000	"intron (NM_199454, intron 3 of 16)"	"intron (NM_199454, intron 3 of 16)"	147912	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	16	1.94	8.24742268	7.67E-08
chr1-4151	chr1	3209998	3210998	+	15.4	1000	"intron (NM_199454, intron 3 of 16)"	"intron (NM_199454, intron 3 of 16)"	-160649	NM_014448	27237	Hs.87435	NM_014448	ENSG00000130762	ARHGEF16	GEF16|NBR	Rho guanine nucleotide exchange factor 16	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4154	chr1	3376540	3377540	+	14.7	1000	"intron (NM_014448, intron 1 of 14)"	"intron (NM_014448, intron 1 of 14)"	5893	NM_014448	27237	Hs.87435	NM_014448	ENSG00000130762	ARHGEF16	GEF16|NBR	Rho guanine nucleotide exchange factor 16	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr1-4157	chr1	4022042	4023042	+	13.4	1000	Intergenic	AluSg|SINE|Alu	21870	NR_040065	728716	Hs.668359	NR_040065		LINC01346	-	long intergenic non-protein coding RNA 1346	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr1-4159	chr1	4179719	4180719	+	16	1000	Intergenic	MLT1B|LTR|ERVL-MaLR	179547	NR_040065	728716	Hs.668359	NR_040065		LINC01346	-	long intergenic non-protein coding RNA 1346	ncRNA	16	0.97	16.49484536	3.54E-11
chr1-4165	chr1	4773294	4774657	+	20.5	1363	"intron (NM_001042478, intron 2 of 5)"	"intron (NM_001042478, intron 2 of 5)"	58870	NM_018836	55966	Hs.12473	NM_018836	ENSG00000196581	AJAP1	MOT8|SHREW-1|SHREW1	adherens junctions associated protein 1	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr1-4168	chr1	7153536	7157921	+	80.7	4385	"intron (NM_015215, intron 4 of 22)"	"intron (NM_015215, intron 4 of 22)"	310344	NR_038934	23261	Hs.397705	NM_015215	ENSG00000171735	CAMTA1	CANPMR	calmodulin binding transcription activator 1	protein-coding	80.65	7.77	10.37966538	2.73E-41
chr1-4172	chr1	7280624	7281624	+	16	1000	"intron (NM_015215, intron 4 of 22)"	"intron (NM_015215, intron 4 of 22)"	435740	NR_038934	23261	Hs.397705	NM_015215	ENSG00000171735	CAMTA1	CANPMR	calmodulin binding transcription activator 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr1-4173	chr1	7353313	7354313	+	15.4	1000	"intron (NM_015215, intron 5 of 22)"	"intron (NM_015215, intron 5 of 22)"	-477516	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-4174	chr1	7371556	7372556	+	14.1	1000	"intron (NM_015215, intron 5 of 22)"	L1ME1|LINE|L1	-459273	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr1-4179	chr1	7617238	7618238	+	13.4	1000	"intron (NM_015215, intron 6 of 22)"	L2b|LINE|L2	-213591	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr1-418	chr1	226742549	226743549	+	24.3	1000	"intron (NM_001003665, intron 1 of 3)"	L2c|LINE|L2	6548	NM_001003665	375057	Hs.116827	NM_001003665	ENSG00000203685	STUM	C1orf95	"stum, mechanosensory transduction mediator homolog"	protein-coding	24.32	5.82	4.178694158	3.56E-07
chr1-4184	chr1	8319225	8320225	+	14.7	1000	Intergenic	Intergenic	50993	NR_125998	102724539	Hs.516816	NR_125998	ENSG00000227634	LINC01714	-	long intergenic non-protein coding RNA 1714	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr1-4186	chr1	8370657	8371912	+	20.5	1255	Intergenic	MLT1B|LTR|ERVL-MaLR	-6861	NM_001080397	50651	Hs.463036	NM_001080397	ENSG00000162426	SLC45A1	DNB5	solute carrier family 45 member 1	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr1-4188	chr1	8973545	8974545	+	16	1000	Intergenic	Intergenic	-31848	NM_001270500	765	Hs.100322	NM_001215	ENSG00000131686	CA6	CA-VI|GUSTIN	carbonic anhydrase 6	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-4191	chr1	9003122	9004122	+	14.7	1000	Intergenic	Intergenic	-2271	NM_001270500	765	Hs.100322	NM_001215	ENSG00000131686	CA6	CA-VI|GUSTIN	carbonic anhydrase 6	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-4194	chr1	9041686	9042686	+	15.4	1000	Intergenic	Intergenic	36293	NM_001270502	765	Hs.100322	NM_001215	ENSG00000131686	CA6	CA-VI|GUSTIN	carbonic anhydrase 6	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-4195	chr1	9128145	9129145	+	14.7	1000	"intron (NM_001135585, intron 1 of 4)"	AluSq2|SINE|Alu	1242	NM_001328620	6518	Hs.530003	NM_003039	ENSG00000142583	SLC2A5	GLUT-5|GLUT5	solute carrier family 2 member 5	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-4197	chr1	9150488	9155576	+	80	5088	Intergenic	HERVFH19-int|LTR|ERV1	-20746	NM_001328619	6518	Hs.530003	NM_003039	ENSG00000142583	SLC2A5	GLUT-5|GLUT5	solute carrier family 2 member 5	protein-coding	80.01	14.56	5.495192308	1.31E-25
chr1-4201	chr1	9172206	9173206	+	16	1000	"intron (NM_024980, intron 1 of 3)"	AluSx|SINE|Alu	16523	NM_024980	80045	Hs.632367	NM_024980	ENSG00000180758	GPR157	-	G protein-coupled receptor 157	protein-coding	16	0.97	16.49484536	3.54E-11
chr1-4202	chr1	9177808	9179412	+	24.3	1604	"intron (NM_024980, intron 1 of 3)"	"intron (NM_024980, intron 1 of 3)"	10619	NM_024980	80045	Hs.632367	NM_024980	ENSG00000180758	GPR157	-	G protein-coupled receptor 157	protein-coding	24.32	0.97	25.07216495	2.01E-20
chr1-4214	chr1	10809123	10812532	+	41	3409	"intron (NM_017766, intron 2 of 15)"	AluSz|SINE|Alu	45906	NM_001079843	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	40.97	4.85	8.44742268	3.22E-19
chr1-4216	chr1	10818177	10825101	+	94.7	6924	"intron (NM_017766, intron 1 of 15)"	"intron (NM_017766, intron 1 of 15)"	35094	NM_001079843	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	94.73	16.5	5.741212121	1.34E-31
chr1-4219	chr1	10889077	10890077	+	15.4	1000	Intergenic	Intergenic	-32844	NM_017766	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4226	chr1	11497779	11500042	+	32.6	2263	Intergenic	Intergenic	-40385	NM_020780	57540	Hs.202355	NM_020780	ENSG00000204624	DISP3	PTCHD2	dispatched RND transporter family member 3	protein-coding	32.64	4.85	6.729896907	5.03E-13
chr1-4230	chr1	11821625	11822625	+	15.4	1000	promoter-TSS (NM_001010881)	promoter-TSS (NM_001010881)	-125	NM_001010881	284498	Hs.585415	NM_001010881	ENSG00000215910	C1orf167	-	chromosome 1 open reading frame 167	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4231	chr1	11834062	11835062	+	16	1000	"intron (NM_001010881, intron 8 of 20)"	"intron (NM_001010881, intron 8 of 20)"	5114	NR_126000	102724659	Hs.737635	NR_126000	ENSG00000177553	LOC102724659	-	uncharacterized LOC102724659	ncRNA	16	3.4	4.705882353	2.25E-05
chr1-4233	chr1	12224809	12227856	+	54.4	3047	promoter-TSS (NM_001066)	promoter-TSS (NM_001066)	-668	NR_107000	102465836		NR_107000	ENSG00000028137	MIR7846	hsa-mir-7846	microRNA 7846	ncRNA	54.41	8.25	6.595151515	1.30E-20
chr1-4234	chr1	12254697	12255697	+	15.4	1000	"intron (NM_001066, intron 8 of 9)"	Charlie15a|DNA|hAT-Charlie	3427	NR_039775	100616438		NR_039775	ENSG00000263676	MIR4632	-	microRNA 4632	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr1-4235	chr1	12715452	12716452	+	16	1000	"intron (NM_001013630, intron 2 of 3)"	HERV4_I-int|LTR|ERV1	11386	NM_001013630	343066	Hs.209954	NM_001013630	ENSG00000204518	AADACL4	-	arylacetamide deacetylase like 4	protein-coding	16	0.97	16.49484536	3.54E-11
chr1-424	chr1	3677201	3682748	+	81.9	5547	"exon (NM_152492, exon 7 of 12)"	"exon (NM_152492, exon 7 of 12)"	-9351	NM_001288583	388588	Hs.22047	NM_001163724	ENSG00000235169	SMIM1	Vel	small integral membrane protein 1 (Vel blood group)	protein-coding	81.93	16.02	5.11423221	6.09E-25
chr1-4241	chr1	14263458	14264458	+	14.1	1000	Intergenic	L1P4|LINE|L1	188082	NM_001007257	7799	Hs.371823	NM_012231	ENSG00000116731	PRDM2	HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2	PR/SET domain 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr1-4243	chr1	14768961	14769961	+	14.7	1000	Intergenic	Intergenic	-155752	NM_015209	23254	Hs.368823	NM_015209	ENSG00000189337	KAZN	KAZ	"kazrin, periplakin interacting protein"	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-4244	chr1	14825226	14826226	+	16	1000	Intergenic	Intergenic	-99487	NM_015209	23254	Hs.368823	NM_015209	ENSG00000189337	KAZN	KAZ	"kazrin, periplakin interacting protein"	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-4248	chr1	15206650	15207650	+	16	1000	"intron (NM_201628, intron 1 of 14)"	MLT1G|LTR|ERVL-MaLR	-43475	NM_001018000	23254	Hs.368823	NM_015209	ENSG00000189337	KAZN	KAZ	"kazrin, periplakin interacting protein"	protein-coding	16	0.97	16.49484536	3.54E-11
chr1-4249	chr1	15256440	15257440	+	15.4	1000	"intron (NM_001018001, intron 1 of 7)"	"intron (NM_001018001, intron 1 of 7)"	644	NM_001018001	23254	Hs.368823	NM_015209	ENSG00000189337	KAZN	KAZ	"kazrin, periplakin interacting protein"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-4250	chr1	15416786	15417786	+	15.4	1000	"intron (NM_201628, intron 8 of 14)"	MIRc|SINE|MIR	61674	NR_027136	200197	Hs.531424	NM_182534	ENSG00000175147	TMEM51-AS1	C1orf126	TMEM51 antisense RNA 1	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr1-4253	chr1	15528618	15529618	+	14.7	1000	"intron (NM_018022, intron 1 of 2)"	MLT1D|LTR|ERVL-MaLR	-30998	NM_001278502	727684	Hs.667584	NM_001278501		C1orf195	-	chromosome 1 open reading frame 195	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-4254	chr1	15586280	15587280	+	16	1000	"intron (NM_052929, intron 2 of 30)"	MIR|SINE|MIR	13012	NM_052929	114827	Hs.659997	NM_052929	ENSG00000142621	FHAD1	-	forkhead associated phosphopeptide binding domain 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-4255	chr1	15637251	15638251	+	16	1000	"intron (NM_052929, intron 7 of 30)"	L1MEc|LINE|L1	63983	NM_052929	114827	Hs.659997	NM_052929	ENSG00000142621	FHAD1	-	forkhead associated phosphopeptide binding domain 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr1-4266	chr1	17419876	17421560	+	26.9	1684	"intron (NM_007365, intron 4 of 15)"	L2b|LINE|L2	25230	NM_007365	11240	Hs.33455	NM_007365	ENSG00000117115	PADI2	PAD-H19|PAD2|PDI2	peptidyl arginine deiminase 2	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr1-4275	chr1	17707301	17708301	+	16	1000	"intron (NM_207421, intron 5 of 16)"	"intron (NM_207421, intron 5 of 16)"	9110	NM_207421	353238	Hs.531598	NM_207421	ENSG00000276747	PADI6	PREMBL2|hPADVI	peptidyl arginine deiminase 6	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-4277	chr1	17710544	17713504	+	40.3	2960	"intron (NM_207421, intron 6 of 16)"	L2|LINE|L2	13333	NM_207421	353238	Hs.531598	NM_207421	ENSG00000276747	PADI6	PREMBL2|hPADVI	peptidyl arginine deiminase 6	protein-coding	40.33	6.8	5.930882353	2.14E-14
chr1-4279	chr1	17871073	17872073	+	14.7	1000	"intron (NM_018125, intron 1 of 28)"	THE1B|LTR|ERVL-MaLR	5243	NR_137288	55160	Hs.443460	NM_018125	ENSG00000074964	ARHGEF10L	GrinchGEF	Rho guanine nucleotide exchange factor 10 like	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr1-4281	chr1	17931135	17932925	+	30.1	1790	"intron (NM_001319837, intron 5 of 25)"	"intron (NM_001319837, intron 5 of 25)"	-12778	NM_001328124	55160	Hs.443460	NM_018125	ENSG00000074964	ARHGEF10L	GrinchGEF	Rho guanine nucleotide exchange factor 10 like	protein-coding	30.08	4.85	6.202061856	2.13E-11
chr1-4282	chr1	17935606	17936606	+	15.4	1000	"intron (NM_001319837, intron 6 of 25)"	"intron (NM_001319837, intron 6 of 25)"	-8702	NM_001328124	55160	Hs.443460	NM_018125	ENSG00000074964	ARHGEF10L	GrinchGEF	Rho guanine nucleotide exchange factor 10 like	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-4287	chr1	18520830	18525735	+	67.8	4905	"intron (NM_032880, intron 1 of 9)"	MIR|SINE|MIR	89042	NM_032880	84966	Hs.212511	NM_032880	ENSG00000117154	IGSF21	-	immunoglobin superfamily member 21	protein-coding	67.85	8.74	7.763157895	4.68E-29
chr1-4288	chr1	18692063	18693063	+	14.7	1000	"intron (NM_032880, intron 6 of 9)"	"intron (NM_032880, intron 6 of 9)"	-114861	NM_152375	127707	Hs.406913	NM_152375	ENSG00000179023	KLHDC7A	-	kelch domain containing 7A	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-4289	chr1	18736653	18737653	+	15.4	1000	Intergenic	Intergenic	-70271	NM_152375	127707	Hs.406913	NM_152375	ENSG00000179023	KLHDC7A	-	kelch domain containing 7A	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-4296	chr1	19091573	19093023	+	21.8	1450	Intergenic	Intergenic	93857	NM_152232	80834	Hs.553548	NM_152232	ENSG00000179002	TAS1R2	GPR71|T1R2|TR2	taste 1 receptor member 2	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr1-4298	chr1	19122937	19123937	+	15.4	1000	Intergenic	AluJb|SINE|Alu	62718	NM_152232	80834	Hs.553548	NM_152232	ENSG00000179002	TAS1R2	GPR71|T1R2|TR2	taste 1 receptor member 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4301	chr1	19333912	19334912	+	16	1000	Intergenic	Intergenic	-51586	NM_001136265	126917	Hs.466625	NM_001136265	ENSG00000169991	IFFO2	-	intermediate filament family orphan 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr1-4303	chr1	19968862	19972581	+	59.5	3719	promoter-TSS (NM_005380)	promoter-TSS (NM_005380)	54	NM_005380	4681	Hs.654502	NM_005380	ENSG00000158747	NBL1	D1S1733E|DAN|DAND1|NB|NO3	"neuroblastoma 1, DAN family BMP antagonist"	protein-coding	59.53	6.8	8.754411765	2.26E-27
chr1-4304	chr1	20144283	20145537	+	20.5	1254	Intergenic	MamRep605|Unknown|Unknown	-3139	NM_019062	54546	Hs.124835	NM_019062	ENSG00000178828	RNF186	-	ring finger protein 186	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr1-4305	chr1	20405661	20406661	+	16	1000	"intron (NM_000929, intron 1 of 4)"	MIRc|SINE|MIR	9460	NM_000929	5322	Hs.319438	NM_000929	ENSG00000127472	PLA2G5	FRFB|GV-PLA2|PLA2-10|hVPLA(2)	phospholipase A2 group V	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-4308	chr1	20546514	20547514	+	16	1000	Intergenic	Intergenic	-34035	NR_110078	101928017	Hs.550803	NR_110078	ENSG00000225986	UBXN10-AS1	-	UBXN10 antisense RNA 1	ncRNA	16	2.91	5.498281787	4.98E-06
chr1-4309	chr1	20591023	20592385	+	21.1	1362	Intergenic	Intergenic	-25708	NM_001039500	127731	Hs.205178	NM_144623	ENSG00000158816	VWA5B1	-	von Willebrand factor A domain containing 5B1	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr1-4310	chr1	20626703	20627703	+	15.4	1000	"intron (NM_001039500, intron 1 of 21)"	MIR|SINE|MIR	9791	NM_001039500	127731	Hs.205178	NM_144623	ENSG00000158816	VWA5B1	-	von Willebrand factor A domain containing 5B1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4319	chr1	20889572	20890572	+	16	1000	Intergenic	Intergenic	11140	NM_207334	163933	Hs.429179	NM_207334	ENSG00000183114	FAM43B	-	family with sequence similarity 43 member B	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-4320	chr1	21846378	21847378	+	15.4	1000	"intron (NM_001127501, intron 1 of 10)"	AluJo|SINE|Alu	11027	NM_001177520	249	Hs.75431	NM_000478	ENSG00000162551	ALPL	AP-TNAP|APTNAP|HOPS|TNAP|TNSALP	"alkaline phosphatase, liver/bone/kidney"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-4321	chr1	22212040	22213040	+	14.7	1000	"intron (NM_001291860, intron 9 of 96)"	"intron (NM_001291860, intron 9 of 96)"	51250	NM_001291860	3339	Hs.562227	NM_005529	ENSG00000142798	HSPG2	HSPG|PLC|PRCAN|SJA|SJS|SJS1	heparan sulfate proteoglycan 2	protein-coding	14.72	0	15.16333034	3.99E-13
chr1-4324	chr1	22274704	22279483	+	62.7	4779	Intergenic	Intergenic	-13303	NM_005529	3339	Hs.562227	NM_005529	ENSG00000142798	HSPG2	HSPG|PLC|PRCAN|SJA|SJS|SJS1	heparan sulfate proteoglycan 2	protein-coding	62.73	7.28	8.616758242	6.15E-29
chr1-4326	chr1	22534100	22538862	+	66.6	4762	Intergenic	MIRb|SINE|MIR	-56251	NR_039613	100616433		NR_039613	ENSG00000266564	MIR4418	-	microRNA 4418	ncRNA	66.57	10.68	6.233146067	2.81E-24
chr1-4329	chr1	22684463	22685463	+	14.1	1000	Intergenic	MLT1K|LTR|ERVL-MaLR	92231	NR_039613	100616433		NR_039613	ENSG00000266564	MIR4418	-	microRNA 4418	ncRNA	14.08	1.46	9.643835616	3.66E-08
chr1-4331	chr1	22735822	22736822	+	14.7	1000	Intergenic	MLT1N2|LTR|ERVL-MaLR	-42022	NM_001330398	9923	Hs.418966	NM_014870	ENSG00000184677	ZBTB40	ZNF923	zinc finger and BTB domain containing 40	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr1-4332	chr1	22872224	22873224	+	15.4	1000	Intergenic	MIRb|SINE|MIR	-17271	NM_020526	2046	Hs.283613	NM_020526	ENSG00000070886	EPHA8	EEK|EK3|HEK3	EPH receptor A8	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-4334	chr1	22909888	22910888	+	16	1000	"intron (NM_001006943, intron 3 of 4)"	"intron (NM_001006943, intron 3 of 4)"	20393	NM_001006943	2046	Hs.283613	NM_020526	ENSG00000070886	EPHA8	EEK|EK3|HEK3	EPH receptor A8	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-4339	chr1	23148749	23150015	+	18.6	1266	"intron (NM_017449, intron 3 of 15)"	"intron (NM_017449, intron 3 of 15)"	40337	NR_036214	100422914		NR_036214	ENSG00000264014	MIR4253	-	microRNA 4253	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr1-4341	chr1	23172441	23177020	+	74.9	4579	"intron (NM_017449, intron 3 of 15)"	"intron (NM_017449, intron 3 of 15)"	14989	NR_036214	100422914		NR_036214	ENSG00000264014	MIR4253	-	microRNA 4253	ncRNA	74.89	9.71	7.712667353	2.67E-31
chr1-4343	chr1	23190184	23191598	+	19.8	1414	"intron (NM_017449, intron 4 of 15)"	MLT1J|LTR|ERVL-MaLR	-1172	NR_036214	100422914		NR_036214	ENSG00000264014	MIR4253	-	microRNA 4253	ncRNA	19.84	1.94	10.22680412	9.57E-11
chr1-4346	chr1	23226323	23230739	+	62.7	4416	"intron (NM_017449, intron 9 of 15)"	AluJb|SINE|Alu	-38812	NR_036214	100422914		NR_036214	ENSG00000264014	MIR4253	-	microRNA 4253	ncRNA	62.73	7.28	8.616758242	6.15E-29
chr1-4348	chr1	23254674	23255674	+	16	1000	Intergenic	MLT2C1|LTR|ERVL	36749	NM_001289974	646262		NM_001289974	ENSG00000215906	LACTBL1	-	lactamase beta like 1	protein-coding	16	0	16.4818808	1.26E-14
chr1-4350	chr1	23749918	23751240	+	19.2	1322	"intron (NM_003196, intron 1 of 10)"	CpG	693	NM_003196	6920	Hs.446354	NM_003196	ENSG00000204219	TCEA3	TFIIS|TFIIS.H	transcription elongation factor A3	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr1-4352	chr1	24408713	24409713	+	16	1000	"intron (NM_152372, intron 16 of 36)"	"intron (NM_152372, intron 16 of 36)"	29452	NM_152372	127294	Hs.523413	NM_152372	ENSG00000142661	MYOM3	-	myomesin 3	protein-coding	16	2.43	6.58436214	7.90E-07
chr1-4353	chr1	24417753	24418753	+	16	1000	"intron (NM_152372, intron 11 of 36)"	"intron (NM_152372, intron 11 of 36)"	20412	NM_152372	127294	Hs.523413	NM_152372	ENSG00000142661	MYOM3	-	myomesin 3	protein-coding	16	3.4	4.705882353	2.25E-05
chr1-4355	chr1	24462226	24463226	+	12.8	1000	"intron (NM_021258, intron 3 of 6)"	AluJb|SINE|Alu	7049	NM_021258	58985	Hs.110915	NM_021258	ENSG00000142677	IL22RA1	CRF2-9|IL22R|IL22R1	interleukin 22 receptor subunit alpha 1	protein-coding	12.8	0.97	13.19587629	8.12E-09
chr1-4356	chr1	24478490	24479490	+	15.4	1000	Intergenic	AluSx|SINE|Alu	-9215	NM_021258	58985	Hs.110915	NM_021258	ENSG00000142677	IL22RA1	CRF2-9|IL22R|IL22R1	interleukin 22 receptor subunit alpha 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4357	chr1	24481243	24482243	+	15.4	1000	"3' UTR (NM_173065, exon 6 of 6)"	"3' UTR (NM_173065, exon 6 of 6)"	-11968	NM_021258	58985	Hs.110915	NM_021258	ENSG00000142677	IL22RA1	CRF2-9|IL22R|IL22R1	interleukin 22 receptor subunit alpha 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-4359	chr1	24550894	24554528	+	55	3634	Intergenic	MER2|DNA|TcMar-Tigger	25981	NR_027087	284632	Hs.638906	NR_027087	ENSG00000230023	LOC284632	-	uncharacterized LOC284632	ncRNA	55.05	8.74	6.298627002	1.56E-20
chr1-4367	chr1	25188556	25189556	+	15.4	1000	Intergenic	Intergenic	56851	NR_106789	102465437		NR_106789	ENSG00000278034	MIR6731	hsa-mir-6731	microRNA 6731	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr1-4370	chr1	25263373	25264373	+	15.4	1000	"intron (NM_001031680, intron 1 of 5)"	"intron (NM_001031680, intron 1 of 5)"	-7103	NM_004350	864	Hs.170019	NM_004350	ENSG00000020633	RUNX3	AML2|CBFA3|PEBP2aC	runt related transcription factor 3	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-4371	chr1	25377894	25378894	+	15.4	1000	Intergenic	MIRb|SINE|MIR	28400	NR_039623	100616365		NR_039623	ENSG00000264371	MIR4425	-	microRNA 4425	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr1-4372	chr1	25456018	25457018	+	14.7	1000	Intergenic	L2c|LINE|L2	102495	NM_015484	25949	Hs.20013	NM_015484	ENSG00000117614	SYF2	CBPIN|NTC31|P29|fSAP29	SYF2 pre-mRNA splicing factor	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-4377	chr1	25979737	25981509	+	26.2	1772	"intron (NM_020379, intron 1 of 11)"	"intron (NM_020379, intron 1 of 11)"	36664	NM_020379	57134	Hs.197043	NM_020379	ENSG00000117643	MAN1C1	HMIC|MAN1A3|MAN1C|pp6318	mannosidase alpha class 1C member 1	protein-coding	26.24	3.4	7.717647059	9.95E-12
chr1-4383	chr1	26380243	26381243	+	15.4	1000	"intron (NM_032588, intron 7 of 8)"	"intron (NM_032588, intron 7 of 8)"	-8114	NM_032513	7780	Hs.143545	NM_032513	ENSG00000158014	SLC30A2	PP12488|TNZD|ZNT2|ZnT-2	solute carrier family 30 member 2	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr1-4386	chr1	26494651	26495651	+	16	1000	Intergenic	Intergenic	-1237	NM_015871	51042	Hs.477273	NM_015871	ENSG00000142684	ZNF593	ZT86	zinc finger protein 593	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-4391	chr1	26740594	26741594	+	14.1	1000	"intron (NM_024674, intron 2 of 3)"	"intron (NM_024674, intron 2 of 3)"	3835	NM_024674	79727	Hs.86154	NM_024674	ENSG00000131914	LIN28A	CSDD1|LIN-28|LIN28|ZCCHC1|lin-28A	lin-28 homolog A	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr1-4395	chr1	29659998	29660998	+	13.4	1000	"intron (NR_110758, intron 1 of 2)"	ERVL-E-int|LTR|ERVL	16128	NR_110758	101928460	Hs.434659	NR_110758	ENSG00000230523	LINC01756	-	long intergenic non-protein coding RNA 1756	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr1-4397	chr1	29670895	29673116	+	35.8	2221	"intron (NR_110758, intron 1 of 2)"	"intron (NR_110758, intron 1 of 2)"	4621	NR_110758	101928460	Hs.434659	NR_110758	ENSG00000230523	LINC01756	-	long intergenic non-protein coding RNA 1756	ncRNA	35.84	5.82	6.158075601	1.09E-13
chr1-4401	chr1	29804200	29805987	+	31.4	1787	Intergenic	CpG	-128467	NR_110758	101928460	Hs.434659	NR_110758	ENSG00000230523	LINC01756	-	long intergenic non-protein coding RNA 1756	ncRNA	31.36	3.88	8.082474227	3.25E-14
chr1-4405	chr1	30351343	30352343	+	14.7	1000	Intergenic	Intergenic	158616	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr1-4406	chr1	30372288	30373288	+	15.4	1000	Intergenic	MIR3|SINE|MIR	137671	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr1-4414	chr1	31114009	31115377	+	19.8	1368	Intergenic	Intergenic	-76926	NR_034182	100129196	Hs.659751	NR_034182	ENSG00000186056	MATN1-AS1	-	MATN1 antisense RNA 1	ncRNA	19.84	1.94	10.22680412	9.57E-11
chr1-4423	chr1	31296700	31300062	+	53.1	3362	Intergenic	L2c|LINE|L2	-67698	NM_006762	7805	Hs.371021	NM_006762	ENSG00000162511	LAPTM5	CLAST6	lysosomal protein transmembrane 5	protein-coding	53.13	8.25	6.44	8.48E-20
chr1-4425	chr1	31350576	31351576	+	16	1000	"intron (NM_014654, intron 2 of 4)"	"intron (NM_014654, intron 2 of 4)"	30404	NM_014654	9672	Hs.158287	NM_014654	ENSG00000162512	SDC3	SDCN|SYND3	syndecan 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-4428	chr1	31909340	31910340	+	16	1000	Intergenic	Intergenic	23180	NM_018565	347735	Hs.270655	NM_018565	ENSG00000168528	SERINC2	FKSG84|PRO0899|TDE2|TDE2L	serine incorporator 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-4436	chr1	32196564	32197564	+	14.1	1000	"intron (NM_001294336, intron 27 of 31)"	"intron (NM_001294336, intron 27 of 31)"	27272	NR_036216	100423028		NR_036216	ENSG00000266580	MIR4254	-	microRNA 4254	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr1-4450	chr1	34052706	34053706	+	16	1000	"intron (NM_001281956, intron 44 of 70)"	MIRb|SINE|MIR	114974	NM_145238	7579	Hs.442705	NM_145238	ENSG00000121903	ZSCAN20	KOX29|ZFP-31|ZNF31|ZNF360	zinc finger and SCAN domain containing 20	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-4456	chr1	34662823	34663823	+	16	1000	"exon (NM_032884, exon 2 of 7)"	"exon (NM_032884, exon 2 of 7)"	20770	NM_001134734	84970	Hs.194610	NM_032884	ENSG00000142698	C1orf94	-	chromosome 1 open reading frame 94	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-4459	chr1	35239495	35240495	+	16	1000	Intergenic	Intergenic	-6795	NM_024009	2707	Hs.522561	NM_024009	ENSG00000188910	GJB3	CX31|DFNA2|DFNA2B|EKV	gap junction protein beta 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-4461	chr1	35683186	35684186	+	14.1	1000	Intergenic	AluSx1|SINE|Alu	-24940	NR_136703	6421	Hs.355934	NM_005066	ENSG00000116560	SFPQ	POMP100|PPP1R140|PSF	splicing factor proline and glutamine rich	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr1-4463	chr1	36148231	36149231	+	14.1	1000	Intergenic	L2c|LINE|L2	36059	NM_152374	127703	Hs.112023	NM_152374	ENSG00000142686	C1orf216	-	chromosome 1 open reading frame 216	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr1-4466	chr1	36999170	37000170	+	15.4	1000	Intergenic	Intergenic	-50755	NM_156039	1441	Hs.524517	NM_000760	ENSG00000119535	CSF3R	CD114|GCSFR|SCN7	colony stimulating factor 3 receptor	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-4468	chr1	37049319	37051018	+	26.9	1699	Intergenic	Intergenic	-101253	NM_156039	1441	Hs.524517	NM_000760	ENSG00000119535	CSF3R	CD114|GCSFR|SCN7	colony stimulating factor 3 receptor	protein-coding	26.88	3.4	7.905882353	1.25E-12
chr1-4469	chr1	37058875	37062003	+	47.4	3128	Intergenic	AluSq2|SINE|Alu	-111524	NM_156039	1441	Hs.524517	NM_000760	ENSG00000119535	CSF3R	CD114|GCSFR|SCN7	colony stimulating factor 3 receptor	protein-coding	47.37	7.28	6.506868132	2.47E-18
chr1-447	chr1	38081461	38082461	+	23	1000	"intron (NM_001038633, intron 5 of 8)"	"intron (NM_001038633, intron 5 of 8)"	18634	NM_001242910	284654	Hs.135015	NM_173640	ENSG00000169218	RSPO1	CRISTIN3|RSPO	R-spondin 1	protein-coding	23.04	5.34	4.314606742	4.49E-07
chr1-4473	chr1	37238187	37239187	+	16	1000	Intergenic	MLT1I|LTR|ERVL-MaLR	261157	NM_000831	2899	Hs.128848	NM_000831	ENSG00000163873	GRIK3	EAA5|GLR7|GLUR7|GluK3|GluR7a	glutamate ionotropic receptor kainate type subunit 3	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-4478	chr1	37433959	37434959	+	14.1	1000	"intron (NM_000831, intron 1 of 15)"	"intron (NM_000831, intron 1 of 15)"	65385	NM_000831	2899	Hs.128848	NM_000831	ENSG00000163873	GRIK3	EAA5|GLR7|GLUR7|GluK3|GluR7a	glutamate ionotropic receptor kainate type subunit 3	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr1-448	chr1	45671087	45674631	+	62.1	3544	promoter-TSS (NM_020883)	promoter-TSS (NM_020883)	-609	NM_020883	57643	Hs.656613	NM_020883	ENSG00000162415	ZSWIM5	-	zinc finger SWIM-type containing 5	protein-coding	62.09	9.22	6.734273319	1.02E-23
chr1-4481	chr1	37900636	37901636	+	14.7	1000	Intergenic	MIR|SINE|MIR	38908	NR_038842	728431	Hs.380738	NR_038842	ENSG00000233621	LINC01137	-	long intergenic non-protein coding RNA 1137	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr1-4482	chr1	38091335	38092335	+	14.7	1000	"intron (NM_001242909, intron 3 of 7)"	"intron (NM_001242909, intron 3 of 7)"	8760	NM_001242910	284654	Hs.135015	NM_173640	ENSG00000169218	RSPO1	CRISTIN3|RSPO	R-spondin 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-4488	chr1	38737509	38738845	+	17.9	1336	Intergenic	LTR16A2|LTR|ERVL	-57738	NR_038928	339442	Hs.434245	NR_038928	ENSG00000237290	LINC01343	-	long intergenic non-protein coding RNA 1343	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr1-4490	chr1	38793448	38794448	+	15.4	1000	Intergenic	Intergenic	-113509	NR_038928	339442	Hs.434245	NR_038928	ENSG00000237290	LINC01343	-	long intergenic non-protein coding RNA 1343	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr1-4495	chr1	39288119	39289119	+	16	1000	Intergenic	Intergenic	36876	NM_022157	64121	Hs.532461	NM_022157	ENSG00000116954	RRAGC	GTR2|RAGC|TIB929	Ras related GTP binding C	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-4496	chr1	40085803	40086803	+	16	1000	Intergenic	MLT1J2|LTR|ERVL-MaLR	19045	NM_014571	26508	Hs.472566	NM_014571	ENSG00000163909	HEYL	HESR3|HEY3|HRT3|bHLHb33	hes related family bHLH transcription factor with YRPW motif-like	protein-coding	16	0.97	16.49484536	3.54E-11
chr1-4499	chr1	40161164	40162164	+	15.4	1000	Intergenic	AluSx|SINE|Alu	-4282	NM_016257	51440	Hs.743975	NM_016257	ENSG00000116983	HPCAL4	HLP4	hippocalcin like 4	protein-coding	15.36	0	15.82260557	1.26E-14
chr1-4502	chr1	40262767	40263767	+	16	1000	Intergenic	L1MB3|LINE|L1	8619	NR_135805	101929536	Hs.552820	NR_135805	ENSG00000261798	LOC101929536	-	uncharacterized LOC101929536	ncRNA	16	2.43	6.58436214	7.90E-07
chr1-4503	chr1	41790571	41791936	+	19.8	1365	Intergenic	L2a|LINE|L2	-36350	NM_001291281	100132074	Hs.559677	NM_001291281		FOXO6	-	forkhead box O6	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr1-451	chr1	48034020	48036101	+	41.6	2081	Intergenic	MIRc|SINE|MIR	-132071	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA	41.61	6.8	6.119117647	3.54E-15
chr1-4511	chr1	43680820	43681820	+	16	1000	"intron (NM_001195831, intron 12 of 23)"	L2a|LINE|L2	-43079	NM_001159936	10969	Hs.346868	NM_006824	ENSG00000117395	EBNA1BP2	EBP2|NOBP|P40	EBNA1 binding protein 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-4512	chr1	43718060	43719528	+	21.8	1468	"intron (NM_001195831, intron 23 of 23)"	"intron (NM_001195831, intron 23 of 23)"	-16871	NM_144626	128218	Hs.104476	NM_144626	ENSG00000179178	TMEM125	-	transmembrane protein 125	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr1-452	chr1	48251410	48252695	+	25.6	1285	"intron (NM_001194986, intron 4 of 6)"	"intron (NM_001194986, intron 4 of 6)"	210510	NM_001194986	388630	Hs.61504	NM_001194986	ENSG00000269113	TRABD2B	TIKI2	TraB domain containing 2B	protein-coding	25.6	2.91	8.797250859	6.53E-13
chr1-4520	chr1	44886509	44887509	+	15.4	1000	"intron (NM_001319956, intron 2 of 14)"	"intron (NM_001319956, intron 2 of 14)"	-2487	NM_001319957	55182	Hs.456557	NM_018150	ENSG00000187147	RNF220	C1orf164	ring finger protein 220	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4523	chr1	44964386	44965386	+	16	1000	"intron (NM_001319957, intron 1 of 13)"	L2a|LINE|L2	-46279	NR_049849	100847089		NR_049849	ENSG00000263381	MIR5584	-	microRNA 5584	ncRNA	16	2.91	5.498281787	4.98E-06
chr1-4526	chr1	45027717	45028717	+	14.7	1000	"intron (NM_001319957, intron 1 of 13)"	"intron (NM_001319957, intron 1 of 13)"	17052	NR_049849	100847089		NR_049849	ENSG00000263381	MIR5584	-	microRNA 5584	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr1-4531	chr1	46924735	46927669	+	35.8	2934	Intergenic	Intergenic	-10826	NR_121680	101929651	Hs.638707	NR_121680	ENSG00000224863	LINC01398	-	long intergenic non-protein coding RNA 1398	ncRNA	35.84	8.25	4.344242424	3.05E-10
chr1-4537	chr1	47954673	47955673	+	14.7	1000	Intergenic	Intergenic	-52184	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr1-4538	chr1	47987369	47988648	+	19.8	1279	Intergenic	MIR3|SINE|MIR	-85019	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA	19.84	1.94	10.22680412	9.57E-11
chr1-4540	chr1	48016900	48018838	+	28.8	1938	Intergenic	Intergenic	-114880	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA	28.8	3.4	8.470588235	1.50E-13
chr1-4542	chr1	48021395	48023153	+	25.6	1758	Intergenic	Intergenic	-119285	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA	25.6	2.91	8.797250859	6.53E-13
chr1-4544	chr1	48041378	48042378	+	16	1000	Intergenic	Intergenic	-138889	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA	16	3.88	4.12371134	7.91E-05
chr1-4545	chr1	48152856	48154822	+	28.8	1966	Intergenic	Intergenic	-250850	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA	28.8	2.43	11.85185185	1.88E-16
chr1-4546	chr1	48236099	48237099	+	15.4	1000	"intron (NM_001194986, intron 6 of 6)"	"intron (NM_001194986, intron 6 of 6)"	225963	NM_001194986	388630	Hs.61504	NM_001194986	ENSG00000269113	TRABD2B	TIKI2	TraB domain containing 2B	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-4548	chr1	48457599	48458599	+	16	1000	"intron (NM_001194986, intron 2 of 6)"	"intron (NM_001194986, intron 2 of 6)"	4463	NM_001194986	388630	Hs.61504	NM_001194986	ENSG00000269113	TRABD2B	TIKI2	TraB domain containing 2B	protein-coding	16	3.4	4.705882353	2.25E-05
chr1-4551	chr1	53889210	53890210	+	15.4	1000	Intergenic	AluSc8|SINE|Alu	15983	NR_002314	163742	Hs.99394	NR_002314	ENSG00000236253	SLC25A3P1	-	solute carrier family 25 member 3 pseudogene 1	pseudo	15.36	1.94	7.917525773	7.67E-08
chr1-4552	chr1	53942204	53943204	+	16	1000	Intergenic	Intergenic	17632	NM_033067	63948	Hs.131654	NM_033067	ENSG00000143006	DMRTB1	-	DMRT like family B with proline rich C-terminal 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-4558	chr1	56925413	56926805	+	17.3	1392	Intergenic	Intergenic	119148	NM_003713	8613	Hs.405156	NM_003713	ENSG00000162407	PLPP3	Dri42|LPP3|PAP2B|PPAP2B|VCIP	phospholipid phosphatase 3	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr1-456	chr1	63538292	63539567	+	22.4	1275	Intergenic	Intergenic	243999	NR_038252	199899	Hs.116210	NR_038252	ENSG00000224209	LINC00466	-	long intergenic non-protein coding RNA 466	ncRNA	22.4	3.88	5.773195876	2.53E-08
chr1-4560	chr1	60416174	60417752	+	25.6	1578	Intergenic	Intergenic	-24493	NM_000775	1573	Hs.152096	NM_000775	ENSG00000134716	CYP2J2	CPJ2|CYPIIJ2	cytochrome P450 family 2 subfamily J member 2	protein-coding	25.6	2.91	8.797250859	6.53E-13
chr1-4561	chr1	60866424	60867424	+	15.4	1000	Intergenic	Intergenic	-327482	NM_152377	127795	Hs.47385	NM_152377	ENSG00000162598	C1orf87	CREF	chromosome 1 open reading frame 87	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-4563	chr1	61515731	61521041	+	89.6	5310	Intergenic	Intergenic	-24560	NM_001145511	4774	Hs.740757	NM_005595	ENSG00000162599	NFIA	CTF|NF-I/A|NF1-A|NFI-A|NFI-L	nuclear factor I A	protein-coding	89.61	17.47	5.129364625	3.50E-27
chr1-4567	chr1	62505354	62506354	+	14.7	1000	"intron (NM_176877, intron 30 of 42)"	AluSx|SINE|Alu	-38604	NR_036058	100422902		NR_036058	ENSG00000263908	MIR3116-1	-	microRNA 3116-1	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr1-4569	chr1	63497722	63498722	+	15.4	1000	Intergenic	LTR16A|LTR|ERVL	248445	NM_032852	84938	Hs.7353	NM_032852	ENSG00000125703	ATG4C	APG4-C|APG4C|AUTL1|AUTL3	autophagy related 4C cysteine peptidase	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-457	chr1	64687004	64688004	+	22.4	1000	"intron (NM_152489, intron 6 of 8)"	AluY|SINE|Alu	18203	NM_152489	148581	Hs.388746	NM_152489	ENSG00000177414	UBE2U	-	ubiquitin conjugating enzyme E2 U (putative)	protein-coding	22.4	5.34	4.194756554	1.97E-06
chr1-4570	chr1	63542305	63543305	+	15.4	1000	Intergenic	(TTCA)n|Simple_repeat|Simple_repeat	240123	NR_038252	199899	Hs.116210	NR_038252	ENSG00000224209	LINC00466	-	long intergenic non-protein coding RNA 466	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr1-4571	chr1	63704243	63705243	+	14.1	1000	"intron (NR_038252, intron 4 of 11)"	7SK|RNA|RNA	78185	NR_038252	199899	Hs.116210	NR_038252	ENSG00000224209	LINC00466	-	long intergenic non-protein coding RNA 466	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr1-4572	chr1	63795081	63796081	+	13.4	1000	Intergenic	CpG	-2926	NR_106716	102464823		NR_106716	ENSG00000275836	MIR6068	hsa-mir-6068	microRNA 6068	ncRNA	13.44	1.46	9.205479452	3.57E-07
chr1-4577	chr1	64643130	64646079	+	34.6	2949	"3' UTR (NM_005012, exon 9 of 9)"	"3' UTR (NM_005012, exon 9 of 9)"	-24697	NM_152489	148581	Hs.388746	NM_152489	ENSG00000177414	UBE2U	-	ubiquitin conjugating enzyme E2 U (putative)	protein-coding	34.56	7.77	4.447876448	3.74E-10
chr1-458	chr1	65006462	65007721	+	24.3	1259	"intron (NM_001293274, intron 1 of 25)"	L1ME4a|LINE|L1	35494	NM_001293274	57685	Hs.443891	NM_020925	ENSG00000158966	CACHD1	-	cache domain containing 1	protein-coding	24.32	5.34	4.554307116	9.72E-08
chr1-4584	chr1	65011732	65014850	+	71.7	3118	"intron (NM_001293274, intron 1 of 25)"	AluSq2|SINE|Alu	-32239	NR_039957	100616338		NR_039957	ENSG00000264470	MIR4794	-	microRNA 4794	ncRNA	71.69	11.65	6.153648069	9.49E-26
chr1-4588	chr1	67950939	67951939	+	16	1000	Intergenic	L2a|LINE|L2	-55316	NM_001018068	26135	Hs.530412	NM_015640	ENSG00000142864	SERBP1	CGI-55|CHD3IP|HABP4L|PAI-RBP1|PAIRBP1	SERPINE1 mRNA binding protein 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-4591	chr1	78510729	78512229	+	23	1500	promoter-TSS (NM_017655)	promoter-TSS (NM_017655)	-110	NM_017655	54810	Hs.603818	NM_017655	ENSG00000137960	GIPC2	SEMCAP-2|SEMCAP2	GIPC PDZ domain containing family member 2	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr1-4592	chr1	84915170	84916170	+	15.4	1000	Intergenic	Intergenic	-29250	NM_025065	80135	Hs.481202	NM_025065	ENSG00000117133	RPF1	BXDC5	ribosome production factor 1 homolog	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4593	chr1	85276546	85277546	+	14.7	1000	Intergenic	Intergenic	81850	NM_012152	23566	Hs.527909	NM_012152	ENSG00000171517	LPAR3	EDG7|Edg-7|GPCR|HOFNH30|LP-A3|LPA3|RP4-678I3	lysophosphatidic acid receptor 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-4595	chr1	85376751	85377751	+	15.4	1000	Intergenic	MIRc|SINE|MIR	-18355	NM_012152	23566	Hs.527909	NM_012152	ENSG00000171517	LPAR3	EDG7|Edg-7|GPCR|HOFNH30|LP-A3|LPA3|RP4-678I3	lysophosphatidic acid receptor 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4596	chr1	85404973	85405973	+	15.4	1000	"intron (NM_001330647, intron 9 of 14)"	"intron (NM_001330647, intron 9 of 14)"	-46577	NM_012152	23566	Hs.527909	NM_012152	ENSG00000171517	LPAR3	EDG7|Edg-7|GPCR|HOFNH30|LP-A3|LPA3|RP4-678I3	lysophosphatidic acid receptor 3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-4600	chr1	86000354	86001354	+	16	1000	"intron (NM_001134445, intron 1 of 6)"	"intron (NM_001134445, intron 1 of 6)"	43192	NM_001134445	23576	Hs.713411	NM_012137	ENSG00000153904	DDAH1	DDAH|DDAH-1|DDAHI|HEL-S-16	dimethylarginine dimethylaminohydrolase 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-4606	chr1	91190130	91191130	+	14.7	1000	Intergenic	CpG	-7836	NM_020063	343472	Hs.451956	NM_020063	ENSG00000143032	BARHL2	-	BarH like homeobox 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-4610	chr1	91659099	91660350	+	19.2	1251	Intergenic	Intergenic	-171912	NM_032186	84146	Hs.173001	NM_016620	ENSG00000122482	ZNF644	BM-005|MYP21|NatF|ZEP-2	zinc finger protein 644	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr1-4612	chr1	94069586	94070586	+	15.4	1000	"intron (NM_001261408, intron 5 of 13)"	"intron (NM_001261408, intron 5 of 13)"	9616	NM_001261410	8412	Hs.36958	NM_003567	ENSG00000137936	BCAR3	NSP2|SH2D3B	breast cancer anti-estrogen resistance 3	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-4616	chr1	95284112	95285112	+	14.1	1000	"intron (NR_104131, intron 1 of 4)"	"intron (NR_104131, intron 1 of 4)"	1225	NR_104131	101928079	Hs.596857	NR_104131	ENSG00000224081	LINC01057	XLOC_000303	long intergenic non-protein coding RNA 1057	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr1-4619	chr1	107679683	107680683	+	15.4	1000	Intergenic	Intergenic	-2357	NM_001312688	22854	Hs.133046	NM_014917	ENSG00000162631	NTNG1	Lmnt1	netrin G1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4623	chr1	110247074	110248608	+	23.7	1534	Intergenic	HERVK11-int|LTR|ERVK	-7023	NM_000851	2949	Hs.75652	NM_000851	ENSG00000134201	GSTM5	GSTM5-5|GTM5	glutathione S-transferase mu 5	protein-coding	23.68	2.43	9.744855967	2.61E-12
chr1-4627	chr1	110624385	110628776	+	71.7	4391	"intron (NR_126382, intron 1 of 3)"	CpG	1270	NR_126382	104355139	Hs.628193	NR_126382	ENSG00000258673	LINC01397	-	long intergenic non-protein coding RNA 1397	ncRNA	71.69	9.22	7.775488069	1.26E-30
chr1-4646	chr1	112346776	112347776	+	14.7	1000	"intron (NM_004980, intron 2 of 7)"	MIR|SINE|MIR	-48857	NM_198926	55924	Hs.193406	NM_019099	ENSG00000197852	FAM212B	C1orf183	family with sequence similarity 212 member B	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-4648	chr1	112349794	112352532	+	42.9	2738	"intron (NM_004980, intron 2 of 7)"	"intron (NM_004980, intron 2 of 7)"	48364	NR_046783	100874295	Hs.738190	NR_046783	ENSG00000232558	KCND3-IT1	-	KCND3 intronic transcript 1	ncRNA	42.89	6.8	6.307352941	5.66E-16
chr1-4651	chr1	112416692	112417692	+	14.1	1000	"intron (NM_004980, intron 2 of 7)"	"intron (NM_004980, intron 2 of 7)"	-17665	NR_046783	100874295	Hs.738190	NR_046783	ENSG00000232558	KCND3-IT1	-	KCND3 intronic transcript 1	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr1-4656	chr1	112571660	112573851	+	39	2191	Intergenic	Intergenic	39565	NM_001270945	643355	Hs.279714	NM_001270945		LINC01750	-	long intergenic non-protein coding RNA 1750	protein-coding	39.04	5.82	6.70790378	2.56E-15
chr1-4657	chr1	112876767	112878277	+	22.4	1510	Intergenic	AluJb|SINE|Alu	-61278	NM_018704	55917	Hs.744100	NM_018704	ENSG00000143079	CTTNBP2NL	-	CTTNBP2 N-terminal like	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr1-4660	chr1	113250265	113251265	+	16	1000	promoter-TSS (NM_175744)	promoter-TSS (NM_175744)	-740	NM_001042678	389	Hs.502659	NM_175744	ENSG00000155366	RHOC	ARH9|ARHC|H9|RHOH9	ras homolog family member C	protein-coding	16	0.97	16.49484536	3.54E-11
chr1-4662	chr1	113374772	113375772	+	14.7	1000	"intron (NR_103746, intron 3 of 6)"	LTR2|LTR|ERV1	17993	NR_103746	100996702	Hs.632431	NR_103746	ENSG00000215866	LINC01356	-	long intergenic non-protein coding RNA 1356	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr1-4663	chr1	113787209	113788209	+	15.4	1000	Intergenic	Intergenic	-38834	NR_038846	643441	Hs.124895	NR_038846		LOC643441	-	uncharacterized LOC643441	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr1-4664	chr1	114642689	114643951	+	17.9	1262	"intron (NM_001270805, intron 4 of 7)"	"intron (NM_001270805, intron 4 of 7)"	51742	NM_205848	148281	Hs.370963	NM_205848	ENSG00000134207	SYT6	sytVI	synaptotagmin 6	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr1-4668	chr1	115136113	115137113	+	15.4	1000	"intron (NM_198459, intron 15 of 17)"	L2a|LINE|L2	-12348	NM_005872	10286	Hs.22960	NM_005872	ENSG00000116752	BCAS2	DAM1|SPF27|Snt309	"BCAS2, pre-mRNA processing factor"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4670	chr1	116370150	116371150	+	16	1000	Intergenic	Intergenic	12683	NM_001111061	4808	Hs.46296	NM_005599	ENSG00000177551	NHLH2	HEN2|NSCL2|bHLHa34	nescient helix-loop-helix 2	protein-coding	16	0.49	32.65306122	1.26E-14
chr1-4671	chr1	116477105	116478105	+	16	1000	"intron (NR_125970, intron 2 of 4)"	"intron (NR_125970, intron 2 of 4)"	15608	NR_125969	101928995	Hs.559119	NR_125969	ENSG00000228127	LINC01649	-	long intergenic non-protein coding RNA 1649	ncRNA	16	3.88	4.12371134	7.91E-05
chr1-4672	chr1	116510373	116512302	+	28.8	1929	"intron (NR_125970, intron 1 of 4)"	"intron (NR_125970, intron 1 of 4)"	-7782	NM_018420	55356	Hs.125482	NM_018420	ENSG00000163393	SLC22A15	FLIPT1|PRO34686	solute carrier family 22 member 15	protein-coding	28.8	4.85	5.93814433	1.30E-10
chr1-4674	chr1	116661838	116662838	+	16	1000	"intron (NM_152367, intron 2 of 6)"	"intron (NM_152367, intron 2 of 6)"	7962	NM_152367	126868	Hs.376194	NM_152367	ENSG00000173212	MAB21L3	C1orf161	mab-21 like 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-4675	chr1	116711764	116712764	+	16	1000	Intergenic	MIR|SINE|MIR	57888	NM_152367	126868	Hs.376194	NM_152367	ENSG00000173212	MAB21L3	C1orf161	mab-21 like 3	protein-coding	16	0.49	32.65306122	1.26E-14
chr1-4680	chr1	117220180	117221513	+	21.8	1333	Intergenic	AluJo|SINE|Alu	6475	NR_031564	100302117		NR_031564	ENSG00000211543	MIR320B1	MIR320B-1|MIRN320B1|hsa-mir-320b-1|mir-320b-1	microRNA 320b-1	ncRNA	21.76	1.94	11.21649485	8.00E-13
chr1-4684	chr1	120193274	120194638	+	19.8	1364	Intergenic	Intergenic	-3566	NM_001080470	90874	Hs.381105	NM_001080470	ENSG00000143067	ZNF697	-	zinc finger protein 697	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr1-4711	chr1	145566479	145567479	+	16	1000	"intron (NM_144698, intron 11 of 13)"	"intron (NM_144698, intron 11 of 13)"	-9009	NM_006099	10401	Hs.435761	NM_006099	ENSG00000131788	PIAS3	ZMIZ5	protein inhibitor of activated STAT 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-4714	chr1	148947645	148948645	+	15.4	1000	"intron (NR_027354, intron 3 of 3)"	HAL1-3A_ME|LINE|L1	17740	NR_027354	645166	Hs.744183	NR_027354		LOC645166	-	lymphocyte-specific protein 1 pseudogene	pseudo	15.36	3.4	4.517647059	2.25E-05
chr1-4718	chr1	151867177	151868177	+	16	1000	"intron (NM_053055, intron 1 of 5)"	"intron (NM_053055, intron 1 of 5)"	14684	NM_053055	117145	Hs.164070	NM_053055	ENSG00000159445	THEM4	CTMP	thioesterase superfamily member 4	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-4720	chr1	152026941	152027941	+	15.4	1000	Intergenic	Intergenic	-17930	NM_005620	6282	Hs.417004	NM_005620	ENSG00000163191	S100A11	HEL-S-43|MLN70|S100C	S100 calcium binding protein A11	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4722	chr1	152478156	152479156	+	13.4	1000	Intergenic	MIR|SINE|MIR	-4664	NM_178438	254910	Hs.516410	NM_178438	ENSG00000186207	LCE5A	LEP18|SPRL5A	late cornified envelope 5A	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr1-4723	chr1	152712951	152713951	+	15.4	1000	Intergenic	Intergenic	-17055	NM_001025231	448834	Hs.149386	NM_001025231	ENSG00000203786	KPRP	C1orf45	keratinocyte proline rich protein	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-4724	chr1	152870096	152871096	+	17.9	1000	Intergenic	HSMAR1|DNA|TcMar-Mariner	-10443	NM_005547	3713	Hs.516439	NM_005547	ENSG00000163207	IVL	-	involucrin	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr1-4725	chr1	152963760	152964760	+	14.7	1000	Intergenic	L2a|LINE|L2	7696	NM_005987	6698	Hs.46320	NM_005987	ENSG00000169474	SPRR1A	SPRK	small proline rich protein 1A	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-4726	chr1	153170448	153171448	+	16	1000	Intergenic	Intergenic	-4958	NM_001010857	149018	Hs.125785	NM_001010857	ENSG00000203784	LELP1	-	late cornified envelope like proline rich 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr1-4731	chr1	153475565	153476565	+	15.4	1000	Intergenic	Intergenic	32652	NM_014624	6277	Hs.275243	NM_014624	ENSG00000197956	S100A6	2A9|5B10|CABP|CACY|PRA	S100 calcium binding protein A6	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-4736	chr1	154383114	154384114	+	15.4	1000	"intron (NM_181359, intron 1 of 8)"	AluSz|SINE|Alu	5945	NM_181359	3570	Hs.135087	NM_000565	ENSG00000160712	IL6R	CD126|IL-6R-1|IL-6RA|IL6Q|IL6RA|IL6RQ|gp80	interleukin 6 receptor	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-4738	chr1	154539429	154540429	+	16	1000	promoter-TSS (NM_000748)	promoter-TSS (NM_000748)	-328	NM_000748	1141	Hs.2306	NM_000748	ENSG00000160716	CHRNB2	EFNL3|nAChRB2	cholinergic receptor nicotinic beta 2 subunit	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-4740	chr1	154845352	154849490	+	49.9	4138	Intergenic	L2b|LINE|L2	-4667	NM_002249	3782	Hs.490765	NM_002249	ENSG00000143603	KCNN3	KCa2.3|SK3|SKCA3|hSK3	potassium calcium-activated channel subfamily N member 3	protein-coding	49.93	9.71	5.142121524	6.34E-16
chr1-4743	chr1	155007043	155009171	+	32	2128	"intron (NM_152494, intron 4 of 16)"	"intron (NM_152494, intron 4 of 16)"	1825	NM_152494	149095	Hs.567717	NM_152494	ENSG00000163357	DCST1	-	DC-STAMP domain containing 1	protein-coding	32	1.94	16.49484536	5.00E-22
chr1-4746	chr1	155089995	155090995	+	15.4	1000	Intergenic	Intergenic	-9854	NM_004428	1942	Hs.516664	NM_004428	ENSG00000169242	EFNA1	B61|ECKLG|EFL1|EPLG1|LERK-1|LERK1|TNFAIP4	ephrin A1	protein-coding	15.36	0	15.82260557	1.26E-14
chr1-4752	chr1	156387240	156394915	+	130.6	7675	promoter-TSS (NR_029691)	promoter-TSS (NR_029691)	481	NR_135268	10485	Hs.380027	NM_006365	ENSG00000125462	C1orf61	CROC4	chromosome 1 open reading frame 61	protein-coding	130.58	27.18	4.804267844	1.78E-36
chr1-4756	chr1	156590736	156592582	+	25	1846	promoter-TSS (NR_135113)	promoter-TSS (NR_135113)	61	NR_135113	101928177	Hs.571810	NR_135113		LOC101928177	-	uncharacterized LOC101928177	ncRNA	24.96	2.91	8.577319588	5.77E-12
chr1-4757	chr1	156594468	156595468	+	14.1	1000	"exon (NM_021817, exon 7 of 7)"	"exon (NM_021817, exon 7 of 7)"	-3248	NR_135113	101928177	Hs.571810	NR_135113		LOC101928177	-	uncharacterized LOC101928177	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr1-4758	chr1	156600209	156603806	+	51.2	3597	Intergenic	Intergenic	-9733	NM_021948	63827	Hs.516904	NM_021948	ENSG00000132692	BCAN	BEHAB|CSPG7	brevican	protein-coding	51.21	9.71	5.273944387	1.19E-16
chr1-4760	chr1	156610913	156612228	+	21.8	1315	promoter-TSS (NM_198427)	promoter-TSS (NM_198427)	-170	NM_021948	63827	Hs.516904	NM_021948	ENSG00000132692	BCAN	BEHAB|CSPG7	brevican	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr1-4762	chr1	156617555	156618555	+	14.7	1000	"intron (NM_021948, intron 5 of 13)"	"intron (NM_021948, intron 5 of 13)"	6315	NM_198427	63827	Hs.516904	NM_021948	ENSG00000132692	BCAN	BEHAB|CSPG7	brevican	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-4763	chr1	156638567	156642161	+	53.8	3594	"exon (NM_006617, exon 4 of 4)"	"exon (NM_006617, exon 4 of 4)"	6825	NM_006617	10763	Hs.527971	NM_006617	ENSG00000132688	NES	Nbla00170	nestin	protein-coding	53.77	10.68	5.034644195	1.03E-16
chr1-4765	chr1	156644637	156647119	+	37.1	2482	"intron (NM_006617, intron 1 of 3)"	"intron (NM_006617, intron 1 of 3)"	1311	NM_006617	10763	Hs.527971	NM_006617	ENSG00000132688	NES	Nbla00170	nestin	protein-coding	37.12	5.82	6.378006873	1.70E-14
chr1-4769	chr1	156848477	156849477	+	15.4	1000	"exon (NM_002529, exon 15 of 17)"	"exon (NM_002529, exon 15 of 17)"	-14546	NM_001080471	375033	Hs.142003	NM_207369	ENSG00000187800	PEAR1	JEDI|MEGF12	platelet endothelial aggregation receptor 1	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr1-4770	chr1	156949939	156950939	+	15.4	1000	"intron (NM_014784, intron 3 of 39)"	"intron (NM_014784, intron 3 of 39)"	-44403	NR_030527	768220		NR_030527	ENSG00000211581	MIR765	MIRN765|hsa-mir-765|mir-765	microRNA 765	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr1-4771	chr1	157013334	157017884	+	62.7	4550	promoter-TSS (NM_198236)	promoter-TSS (NM_198236)	-447	NM_014784	9826	Hs.516954	NM_014784	ENSG00000132694	ARHGEF11	GTRAP48|PDZ-RHOGEF	Rho guanine nucleotide exchange factor 11	protein-coding	62.73	15.53	4.039278815	1.52E-15
chr1-4776	chr1	157128847	157129847	+	15.4	1000	Intergenic	Intergenic	-20964	NM_001145312	2117	Hs.105636	NM_005240	ENSG00000117036	ETV3	METS|PE-1|PE1|bA110J1.4	ETS variant 3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-4777	chr1	157137744	157138744	+	14.7	1000	Intergenic	Intergenic	-29861	NM_001145312	2117	Hs.105636	NM_005240	ENSG00000117036	ETV3	METS|PE-1|PE1|bA110J1.4	ETS variant 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-4778	chr1	157153196	157154196	+	14.1	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	-45313	NM_001145312	2117	Hs.105636	NM_005240	ENSG00000117036	ETV3	METS|PE-1|PE1|bA110J1.4	ETS variant 3	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr1-4780	chr1	157400223	157401539	+	20.5	1316	Intergenic	HERVL66-int|LTR|ERVL	121429	NM_031281	83416	Hs.415950	NM_031281	ENSG00000143297	FCRL5	BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820	Fc receptor like 5	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr1-4782	chr1	157405235	157406235	+	15.4	1000	Intergenic	LTR19-int|LTR|ERV1	116575	NM_031281	83416	Hs.415950	NM_031281	ENSG00000143297	FCRL5	BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820	Fc receptor like 5	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr1-4783	chr1	157468684	157470052	+	22.4	1368	Intergenic	MER61-int|LTR|ERV1	52942	NM_031281	83416	Hs.415950	NM_031281	ENSG00000143297	FCRL5	BXMAS1|CD307|CD307e|FCRH5|IRTA2|PRO820	Fc receptor like 5	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr1-4797	chr1	159910497	159911497	+	15.4	1000	"intron (NM_001135050, intron 3 of 20)"	"intron (NM_001135050, intron 3 of 20)"	4389	NM_020789	57549	Hs.591472	NM_020789	ENSG00000085552	IGSF9	FP18798|IGSF9A|Nrt1	immunoglobulin superfamily member 9	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-4800	chr1	160032803	160033803	+	15.4	1000	"intron (NM_002241, intron 1 of 1)"	"intron (NM_002241, intron 1 of 1)"	6748	NM_002241	3766	Hs.408960	NM_002241	ENSG00000177807	KCNJ10	BIRK-10|KCNJ13-PEN|KIR1.2|KIR4.1|SESAME	potassium voltage-gated channel subfamily J member 10	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-4801	chr1	160041043	160042043	+	17.3	1000	Intergenic	L2c|LINE|L2	-1492	NM_002241	3766	Hs.408960	NM_002241	ENSG00000177807	KCNJ10	BIRK-10|KCNJ13-PEN|KIR1.2|KIR4.1|SESAME	potassium voltage-gated channel subfamily J member 10	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr1-4802	chr1	160085775	160087450	+	25	1675	"intron (NM_000702, intron 1 of 22)"	"intron (NM_000702, intron 1 of 22)"	1092	NM_000702	477	Hs.34114	NM_000702	ENSG00000018625	ATP1A2	FHM2|MHP2	ATPase Na+/K+ transporting subunit alpha 2	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr1-4803	chr1	160142340	160143671	+	23	1331	"intron (NM_144699, intron 12 of 21)"	"intron (NM_144699, intron 12 of 21)"	-4196	NM_001001734	480	Hs.662219	NM_144699	ENSG00000132681	ATP1A4	ATP1A1|ATP1AL2	ATPase Na+/K+ transporting subunit alpha 4	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr1-4807	chr1	160617426	160618932	+	19.8	1506	Intergenic	L1MA3|LINE|L1	-1078	NM_001330754	6504	Hs.523660	NM_003037	ENSG00000117090	SLAMF1	CD150|CDw150|SLAM	signaling lymphocytic activation molecule family member 1	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr1-4809	chr1	160687605	160688994	+	23	1389	Intergenic	AluSx|SINE|Alu	-6658	NM_001778	962	Hs.243564	NM_001778	ENSG00000117091	CD48	BCM1|BLAST|BLAST1|MEM-102|SLAMF2|hCD48|mCD48	CD48 molecule	protein-coding	23.04	2.43	9.481481481	2.61E-12
chr1-481	chr1	202182768	202184273	+	29.4	1505	"intron (NM_001017404, intron 1 of 15)"	CpG	237	NM_001017404	59352	Hs.497402	NM_021636	ENSG00000133067	LGR6	GPCR|VTS20631	leucine rich repeat containing G protein-coupled receptor 6	protein-coding	29.44	6.8	4.329411765	1.16E-08
chr1-4812	chr1	161687019	161688664	+	23.7	1645	Intergenic	Charlie18a|DNA|hAT-Charlie	-3493	NM_001002901	127943	Hs.517422	NM_001002901	ENSG00000162746	FCRLB	FCRL2|FCRLM2|FCRLY|FREB-2|FREB2|FcRY	Fc receptor like B	protein-coding	23.68	2.43	9.744855967	2.61E-12
chr1-4818	chr1	165514121	165515121	+	15.4	1000	"intron (NM_001005214, intron 1 of 1)"	"intron (NM_001005214, intron 1 of 1)"	1143	NM_001005214	440699	Hs.664975	NM_001005214	ENSG00000162763	LRRC52	-	leucine rich repeat containing 52	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4820	chr1	166553058	166554430	+	23.7	1372	Intergenic	MIRb|SINE|MIR	-19409	NR_002925	116123	Hs.348539	NM_138784	ENSG00000215834	FMO9P	-	flavin containing monooxygenase 9 pseudogene	pseudo	23.68	4.85	4.882474227	1.15E-07
chr1-4821	chr1	168090970	168091970	+	15.4	1000	"intron (NM_001267610, intron 1 of 6)"	L2a|LINE|L2	14204	NM_001267612	23432	Hs.271809	NM_007369	ENSG00000143147	GPR161	RE2	G protein-coupled receptor 161	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4822	chr1	171633040	171634040	+	15.4	1000	Intergenic	MLT1F|LTR|ERVL-MaLR	-11767	NM_000261	4653	Hs.436037	NM_000261	ENSG00000034971	MYOC	GLC1A|GPOA|JOAG|JOAG1|TIGR	myocilin	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-4823	chr1	173548911	173549911	+	16	1000	"intron (NM_178527, intron 7 of 27)"	MER63A|DNA|hAT-Blackjack	22822	NM_178527	284525	Hs.494981	NM_178527	ENSG00000162753	SLC9C2	SLC9A11	solute carrier family 9 member C2 (putative)	protein-coding	16	2.43	6.58436214	7.90E-07
chr1-4824	chr1	175120007	175121007	+	15.4	1000	Intergenic	Intergenic	41442	NM_001319231	9674	Hs.518138	NM_014656	ENSG00000235750	KIAA0040	-	KIAA0040	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-4826	chr1	175829813	175830813	+	15.4	1000	Intergenic	Intergenic	-16166	NR_125964	101928751		NR_125964	ENSG00000224718	LINC01657	-	long intergenic non-protein coding RNA 1657	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr1-4827	chr1	178571286	178574711	+	49.3	3425	Intergenic	Intergenic	61067	NR_033186	400798	Hs.668085	NM_207467	ENSG00000213057	C1orf220	-	chromosome 1 open reading frame 220	ncRNA	49.29	6.8	7.248529412	3.87E-20
chr1-4828	chr1	179408812	179409812	+	15.4	1000	"intron (NR_073544, intron 15 of 25)"	HERVK3-int|LTR|ERVK	74205	NR_073544	126859	Hs.658505	NM_144696	ENSG00000162779	AXDND1	C1orf125	axonemal dynein light chain domain containing 1	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr1-4829	chr1	179602893	179604189	+	17.3	1296	"intron (NM_001199092, intron 4 of 13)"	"intron (NM_001199092, intron 4 of 13)"	28179	NM_001199092	163589	Hs.197354	NM_173533	ENSG00000162782	TDRD5	TUDOR3	tudor domain containing 5	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr1-4831	chr1	179790152	179791152	+	15.4	1000	Intergenic	Intergenic	56289	NM_022347	163590	Hs.571797	NM_022347	ENSG00000169905	TOR1AIP2	IFRG15|LULL1|NET9	torsin 1A interacting protein 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-4836	chr1	181457815	181458815	+	15.4	1000	"intron (NM_001205294, intron 1 of 45)"	"intron (NM_001205294, intron 1 of 45)"	5629	NM_001205294	777	Hs.437444	NM_000721	ENSG00000198216	CACNA1E	BII|CACH6|CACNL1A6|Cav2.3|gm139	calcium voltage-gated channel subunit alpha1 E	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-4837	chr1	181674072	181675072	+	16	1000	"intron (NM_001205294, intron 7 of 45)"	"intron (NM_001205294, intron 7 of 45)"	221886	NM_001205294	777	Hs.437444	NM_000721	ENSG00000198216	CACNA1E	BII|CACH6|CACNL1A6|Cav2.3|gm139	calcium voltage-gated channel subunit alpha1 E	protein-coding	16	0.97	16.49484536	3.54E-11
chr1-4838	chr1	182530013	182531013	+	14.7	1000	TTS (NM_001137669)	TTS (NM_001137669)	27881	NM_021133	6041	Hs.518545	NM_021133	ENSG00000135828	RNASEL	PRCA1|RNS4	ribonuclease L	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-484	chr1	204261208	204262459	+	22.4	1251	"intron (NM_014935, intron 1 of 22)"	"intron (NM_014935, intron 1 of 22)"	67224	NM_014935	22874	Hs.253146	NM_014935	ENSG00000143850	PLEKHA6	PEPP-3|PEPP3	pleckstrin homology domain containing A6	protein-coding	22.4	0.97	23.09278351	1.19E-17
chr1-4843	chr1	182993024	182994024	+	15.4	1000	"intron (NM_002293, intron 1 of 27)"	"intron (NM_002293, intron 1 of 27)"	929	NM_002293	3915	Hs.609663	NM_002293	ENSG00000135862	LAMC1	LAMB2	laminin subunit gamma 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-4846	chr1	183241080	183242080	+	16	1000	"intron (NM_170706, intron 8 of 10)"	"intron (NM_170706, intron 8 of 10)"	32429	NM_170706	23057	Hs.497123	NM_015039	ENSG00000157064	NMNAT2	C1orf15|PNAT2	nicotinamide nucleotide adenylyltransferase 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-4847	chr1	183245752	183246752	+	14.7	1000	"intron (NM_170706, intron 8 of 10)"	MIRb|SINE|MIR	27757	NM_170706	23057	Hs.497123	NM_015039	ENSG00000157064	NMNAT2	C1orf15|PNAT2	nicotinamide nucleotide adenylyltransferase 2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr1-4848	chr1	184952877	184953877	+	15.4	1000	Intergenic	Intergenic	-9659	NM_052966	116496	Hs.518662	NM_052966	ENSG00000135842	FAM129A	C1orf24|GIG39|NIBAN	family with sequence similarity 129 member A	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-4849	chr1	199728621	199729621	+	15.4	1000	Intergenic	MER57A1|LTR|ERV1	-267609	NM_003822	2494	Hs.33446	NM_003822	ENSG00000116833	NR5A2	B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2	nuclear receptor subfamily 5 group A member 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4853	chr1	200014498	200015755	+	16.6	1257	"intron (NM_001276464, intron 3 of 6)"	"intron (NM_001276464, intron 3 of 6)"	3173	NM_001276464	2494	Hs.33446	NM_003822	ENSG00000116833	NR5A2	B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2	nuclear receptor subfamily 5 group A member 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-4855	chr1	201033528	201037825	+	50.6	4297	"intron (NM_000069, intron 20 of 43)"	"intron (NM_000069, intron 20 of 43)"	-42848	NM_001252102	23046	Hs.169182	NM_017596	ENSG00000116852	KIF21B	-	kinesin family member 21B	protein-coding	50.57	4.85	10.42680412	4.58E-26
chr1-4862	chr1	201303632	201304632	+	16	1000	Intergenic	Intergenic	42696	NM_001276346	7139	Hs.533613	NM_000364	ENSG00000118194	TNNT2	CMD1D|CMH2|CMPD2|LVNC6|RCM3|TnTC|cTnT	"troponin T2, cardiac type"	protein-coding	16	3.4	4.705882353	2.25E-05
chr1-4864	chr1	201388320	201389320	+	16	1000	"intron (NM_003281, intron 1 of 7)"	"intron (NM_003281, intron 1 of 7)"	2054	NM_003281	7135	Hs.320890	NM_003281	ENSG00000159173	TNNI1	SSTNI|TNN1	"troponin I1, slow skeletal type"	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-4868	chr1	201752255	201753255	+	16.6	1000	"exon (NM_020443, exon 7 of 30)"	"exon (NM_020443, exon 7 of 30)"	-24984	NR_031599	100302158		NR_031599	ENSG00000221028	MIR1231	MIRN1231|hsa-mir-1231	microRNA 1231	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr1-4870	chr1	201895784	201896784	+	14.7	1000	"intron (NM_012134, intron 1 of 2)"	"intron (NM_012134, intron 1 of 2)"	19432	NM_012134	25802	Hs.519075	NM_012134	ENSG00000163431	LMOD1	1D|64kD|D1|SM-LMOD|SMLMOD	leiomodin 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-4873	chr1	202671462	202673949	+	31.4	2487	"intron (NM_177402, intron 1 of 8)"	"intron (NM_177402, intron 1 of 8)"	6846	NM_177402	127833	Hs.25422	NM_177402	ENSG00000143858	SYT2	CMS7|MYSPC|SytII	synaptotagmin 2	protein-coding	31.36	3.88	8.082474227	3.25E-14
chr1-4875	chr1	202833579	202834579	+	16	1000	"intron (NR_002929, intron 1 of 2)"	AluSx1|SINE|Alu	3197	NR_002929	148709	Hs.162880	NR_002929	ENSG00000234996	LOC148709	-	actin pseudogene	pseudo	16	3.4	4.705882353	2.25E-05
chr1-4878	chr1	203107474	203109932	+	35.8	2458	"intron (NM_001048230, intron 2 of 2)"	L2a|LINE|L2	11867	NM_001048230	134	Hs.77867	NM_000674	ENSG00000163485	ADORA1	RDC7	adenosine A1 receptor	protein-coding	35.84	5.34	6.711610487	1.37E-14
chr1-4881	chr1	203186863	203187863	+	16	1000	"intron (NR_045784, intron 9 of 12)"	"intron (NR_045784, intron 9 of 12)"	11497	NM_001270509	1118	Hs.201688	NM_003465	ENSG00000133063	CHIT1	CHI3|CHIT|CHITD	chitinase 1	protein-coding	16	1.46	10.95890411	3.44E-09
chr1-4886	chr1	203407532	203412033	+	58.9	4501	Intergenic	Intergenic	-35101	NM_002725	5549	Hs.632481	NM_002725	ENSG00000188783	PRELP	MST161|MSTP161|SLRR2A	proline and arginine rich end leucine rich repeat protein	protein-coding	58.89	12.62	4.666402536	6.23E-17
chr1-4888	chr1	203423866	203426266	+	32	2400	Intergenic	MER102b|DNA|hAT-Charlie	-19817	NM_002725	5549	Hs.632481	NM_002725	ENSG00000188783	PRELP	MST161|MSTP161|SLRR2A	proline and arginine rich end leucine rich repeat protein	protein-coding	32	6.8	4.705882353	5.32E-10
chr1-4891	chr1	204014257	204015257	+	16	1000	Intergenic	Intergenic	-4365	NR_027902	284573	Hs.406979	NR_027902	ENSG00000176754	LINC00303	C1orf157|NCRNA00303	long intergenic non-protein coding RNA 303	ncRNA	16	1.94	8.24742268	7.67E-08
chr1-4894	chr1	204197816	204198816	+	14.1	1000	"intron (NM_014935, intron 18 of 22)"	"intron (NM_014935, intron 18 of 22)"	-15096	NM_198447	127845	Hs.532401	NM_198447	ENSG00000174567	GOLT1A	CGI-141|GOT1|HMFN1187|YMR292W|hGOT1b	golgi transport 1A	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr1-4896	chr1	204213874	204214874	+	15.4	1000	"intron (NM_014935, intron 14 of 22)"	"intron (NM_014935, intron 14 of 22)"	-31154	NM_198447	127845	Hs.532401	NM_198447	ENSG00000174567	GOLT1A	CGI-141|GOT1|HMFN1187|YMR292W|hGOT1b	golgi transport 1A	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4899	chr1	204273663	204274663	+	15.4	1000	"intron (NM_014935, intron 1 of 22)"	"intron (NM_014935, intron 1 of 22)"	54894	NM_014935	22874	Hs.253146	NM_014935	ENSG00000143850	PLEKHA6	PEPP-3|PEPP3	pleckstrin homology domain containing A6	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-4902	chr1	204346210	204347890	+	27.5	1680	Intergenic	CpG	-8203	NR_027022	127841	Hs.213144	NR_027022	ENSG00000280924	LINC00628	-	long intergenic non-protein coding RNA 628	ncRNA	27.52	4.85	5.674226804	7.61E-10
chr1-4904	chr1	204619996	204621370	+	23	1374	"intron (NM_201630, intron 1 of 1)"	MER81|DNA|hAT-Blackjack	33798	NM_006338	10446	Hs.26312	NM_006338	ENSG00000170382	LRRN2	FIGLER7|GAC1|LRANK1|LRRN5	leucine rich repeat neuronal 2	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr1-4910	chr1	204865183	204866183	+	15.4	1000	"intron (NM_001160332, intron 1 of 27)"	"intron (NM_001160332, intron 1 of 27)"	-47671	NM_001160331	23114	Hs.13349	NM_015090	ENSG00000163531	NFASC	NF|NRCAML	neurofascin	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-4912	chr1	204979976	204982728	+	41	2752	"intron (NM_001160331, intron 25 of 26)"	"intron (NM_001160331, intron 25 of 26)"	-30713	NM_001346083	6900	Hs.519220	NM_005076	ENSG00000184144	CNTN2	AXT|FAME5|TAG-1|TAX|TAX1	contactin 2	protein-coding	40.97	4.85	8.44742268	3.22E-19
chr1-4914	chr1	205023306	205024684	+	23.7	1378	"intron (NR_144350, intron 2 of 22)"	"intron (NR_144350, intron 2 of 22)"	11743	NR_144350	6900	Hs.519220	NM_005076	ENSG00000184144	CNTN2	AXT|FAME5|TAG-1|TAX|TAX1	contactin 2	protein-coding	23.68	1.94	12.20618557	6.71E-14
chr1-4920	chr1	205334795	205336866	+	33.3	2071	Intergenic	AluSx3|SINE|Alu	-6550	NR_038425	284576	Hs.585440	NR_038425	ENSG00000226235	LEMD1-AS1	-	LEMD1 antisense RNA 1	ncRNA	33.28	4.85	6.86185567	7.28E-14
chr1-4923	chr1	205388376	205390187	+	25.6	1811	"intron (NM_001199050, intron 2 of 5)"	AluSx|SINE|Alu	1933	NM_001199052	93273	Hs.655520	NM_001001552	ENSG00000186007	LEMD1	CT50|LEMP-1	LEM domain containing 1	protein-coding	25.6	4.37	5.85812357	7.40E-10
chr1-4934	chr1	206228188	206229473	+	21.1	1285	"intron (NM_000707, intron 1 of 1)"	AluJb|SINE|Alu	4547	NM_000707	553	Hs.1372	NM_000707	ENSG00000198049	AVPR1B	AVPR3	arginine vasopressin receptor 1B	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr1-4936	chr1	207133726	207135006	+	18.6	1280	"exon (NM_001170631, exon 6 of 8)"	"exon (NM_001170631, exon 6 of 8)"	9604	NM_032029	83953	Hs.145519	NM_032029	ENSG00000162897	FCAMR	CD351|FCA/MR|FKSG87	Fc fragment of IgA and IgM receptor	protein-coding	18.56	1.46	12.71232877	2.41E-11
chr1-4937	chr1	207186077	207187472	+	21.8	1395	Intergenic	L2c|LINE|L2	19327	NM_023938	79098	Hs.32417	NM_023938	ENSG00000182795	C1orf116	SARG	chromosome 1 open reading frame 116	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr1-4946	chr1	208225692	208226692	+	15.4	1000	"intron (NM_025179, intron 14 of 31)"	"intron (NM_025179, intron 14 of 31)"	-141509	NM_001773	947	Hs.374990	NM_001773	ENSG00000174059	CD34	-	CD34 molecule	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-495	chr1	3569420	3570953	+	30.7	1533	"intron (NM_005427, intron 1 of 13)"	"intron (NM_005427, intron 1 of 13)"	1057	NM_001204184	7161	Hs.192132	NM_005427	ENSG00000078900	TP73	P73	tumor protein p73	protein-coding	30.72	3.88	7.917525773	3.25E-14
chr1-4957	chr1	209142347	209143347	+	16	1000	Intergenic	Intergenic	-355954	NR_135085	105372897	Hs.116154	NR_135085	ENSG00000227940	LINC01696	-	long intergenic non-protein coding RNA 1696	ncRNA	16	2.91	5.498281787	4.98E-06
chr1-4964	chr1	210554473	210557883	+	43.5	3410	"intron (NM_001122834, intron 3 of 11)"	"intron (NM_001122834, intron 3 of 11)"	53538	NM_001170580	55733	Hs.58650	NM_018194	ENSG00000054392	HHAT	MART2|SKI1|Skn	hedgehog acyltransferase	protein-coding	43.53	9.71	4.483007209	1.81E-12
chr1-4967	chr1	212598044	212599044	+	16	1000	Intergenic	PRIMA41-int|LTR|ERV1	-7685	NR_026598	29937	Hs.461787	NM_013349	ENSG00000117691	NENF	CIR2|SCIRP10|SPUF	neudesin neurotrophic factor	protein-coding	16	3.88	4.12371134	7.91E-05
chr1-4971	chr1	213577394	213578394	+	16	1000	Intergenic	L2b|LINE|L2	353319	NM_001287219	26750	Hs.591416	NM_012424	ENSG00000136643	RPS6KC1	RPK118|RSKL1|S6K-delta-1|S6PKh1|humS6PKh1	ribosomal protein S6 kinase C1	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-4974	chr1	215839602	215840602	+	16	1000	"intron (NM_206933, intron 64 of 71)"	"intron (NM_206933, intron 64 of 71)"	99380	NM_016121	51133	Hs.335139	NM_016121	ENSG00000136636	KCTD3	NY-REN-45	potassium channel tetramerization domain containing 3	protein-coding	16	0.49	32.65306122	1.26E-14
chr1-4978	chr1	222006444	222009341	+	40.3	2897	"intron (NR_125989, intron 2 of 3)"	MIRb|SINE|MIR	6116	NR_125989	101929771	Hs.557001	NR_125989	ENSG00000227925	LINC01655	-	long intergenic non-protein coding RNA 1655	ncRNA	40.33	5.82	6.929553265	3.74E-16
chr1-498	chr1	8222962	8224253	+	24.3	1291	Intergenic	L2a|LINE|L2	-45125	NR_125998	102724539	Hs.516816	NR_125998	ENSG00000227634	LINC01714	-	long intergenic non-protein coding RNA 1714	ncRNA	24.32	5.82	4.178694158	3.56E-07
chr1-4981	chr1	223442738	223443738	+	14.1	1000	"intron (NM_001037175, intron 3 of 5)"	"intron (NM_001037175, intron 3 of 5)"	94306	NM_017982	55061	Hs.497841	NM_017982	ENSG00000143502	SUSD4	PRO222	sushi domain containing 4	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr1-4983	chr1	223854924	223855924	+	16	1000	Intergenic	AluJo|SINE|Alu	-1988	NM_001143962	388743	Hs.291487	NM_001143962	ENSG00000203697	CAPN8	nCL-2	calpain 8	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-4984	chr1	223874493	223875493	+	15.4	1000	Intergenic	THE1B|LTR|ERVL-MaLR	-14302	NM_001146068	824	Hs.350899	NM_001748	ENSG00000162909	CAPN2	CANP2|CANPL2|CANPml|mCANP	calpain 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-4988	chr1	224802280	224806743	+	95.4	4463	"non-coding (NR_136287, exon 1 of 5)"	"non-coding (NR_136287, exon 1 of 5)"	332	NM_152495	149111	Hs.731723	NM_152495	ENSG00000143786	CNIH3	CNIH-3	cornichon family AMPA receptor auxiliary protein 3	protein-coding	95.37	10.68	8.929775281	1.20E-43
chr1-4990	chr1	225848611	225849611	+	15.4	1000	Intergenic	AluY|SINE|Alu	-8266	NM_018212	55740	Hs.497893	NM_018212	ENSG00000154380	ENAH	ENA|MENA|NDPP1	enabled homolog (Drosophila)	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-4991	chr1	225851971	225852971	+	15.4	1000	Intergenic	MLT1H2|LTR|ERVL-MaLR	-11626	NM_018212	55740	Hs.497893	NM_018212	ENSG00000154380	ENAH	ENA|MENA|NDPP1	enabled homolog (Drosophila)	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-4992	chr1	225859203	225860203	+	14.7	1000	Intergenic	AluSx|SINE|Alu	-18858	NM_018212	55740	Hs.497893	NM_018212	ENSG00000154380	ENAH	ENA|MENA|NDPP1	enabled homolog (Drosophila)	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-4998	chr1	226410030	226412402	+	32.6	2372	promoter-TSS (NM_001282402)	promoter-TSS (NM_001282402)	-103	NM_001282402	83881	Hs.282079	NM_031944	ENSG00000185155	MIXL1	MILD1|MIX|MIXL	Mix paired-like homeobox	protein-coding	32.64	7.28	4.483516484	2.08E-09
chr1-5005	chr1	227057018	227059444	+	39	2426	promoter-TSS (NM_000447)	promoter-TSS (NM_000447)	-42	NM_012486	5664	Hs.25363	NM_000447	ENSG00000143801	PSEN2	AD3L|AD4|CMD1V|PS2|STM2	presenilin 2	protein-coding	39.04	5.34	7.310861423	2.72E-16
chr1-5009	chr1	228632299	228634171	+	28.8	1872	Intergenic	Intergenic	12325	NM_033445	92815	Hs.26331	NM_033445	ENSG00000181218	HIST3H2A	-	histone cluster 3 H2A	protein-coding	28.8	1.94	14.84536082	1.99E-18
chr1-5010	chr1	228920762	228922108	+	19.2	1346	Intergenic	Intergenic	50611	NM_021205	58480	Hs.647774	NM_021205	ENSG00000116574	RHOU	ARHU|CDC42L1|G28K|WRCH1|hG28K	ras homolog family member U	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr1-5013	chr1	228969982	228972954	+	32	2972	Intergenic	FAM|SINE|Alu	100644	NM_021205	58480	Hs.647774	NM_021205	ENSG00000116574	RHOU	ARHU|CDC42L1|G28K|WRCH1|hG28K	ras homolog family member U	protein-coding	32	7.77	4.118404118	7.28E-09
chr1-5015	chr1	229543014	229544321	+	20.5	1307	Intergenic	CpG	26176	NM_001100	58	Hs.1288	NM_001100	ENSG00000143632	ACTA1	ACTA|ASMA|CFTD|CFTD1|CFTDM|MPFD|NEM1|NEM2|NEM3|SHPM	"actin, alpha 1, skeletal muscle"	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr1-5016	chr1	230672051	230673051	+	14.1	1000	Intergenic	Charlie8|DNA|hAT-Charlie	-105651	NM_007357	22796	Hs.211800	NM_007357	ENSG00000135775	COG2	LDLC	component of oligomeric golgi complex 2	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr1-5020	chr1	231586018	231587018	+	15.4	1000	Intergenic	L1PBa|LINE|L1	-25728	NM_022051	54583	Hs.444450	NM_022051	ENSG00000135766	EGLN1	C1orf12|ECYT3|HALAH|HIF-PH2|HIFPH2|HPH-2|HPH2|PHD2|SM20|ZMYND6	egl-9 family hypoxia inducible factor 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-5021	chr1	233557609	233558609	+	14.7	1000	Intergenic	L1MD1|LINE|L1	94595	NM_032435	84451	Hs.547779	NM_032435	ENSG00000143674	MAP3K21	KIAA1804|MLK4|dJ862P8.3	mitogen-activated protein kinase kinase kinase 21	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5022	chr1	233616191	233617191	+	14.7	1000	Intergenic	MLT1H2-int|LTR|ERVL-MaLR	-133059	NM_002245	3775	Hs.208544	NM_002245	ENSG00000135750	KCNK1	DPK|HOHO|K2P1|K2p1.1|KCNO1|TWIK-1|TWIK1	potassium two pore domain channel subfamily K member 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5023	chr1	233997238	233998238	+	15.4	1000	Intergenic	AluSg7|SINE|Alu	-42720	NM_173508	148641	Hs.158748	NM_173508	ENSG00000183780	SLC35F3	-	solute carrier family 35 member F3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-5024	chr1	234360851	234361851	+	16	1000	"intron (NM_001300845, intron 1 of 6)"	L2c|LINE|L2	11394	NM_001300845	148641	Hs.158748	NM_173508	ENSG00000183780	SLC35F3	-	solute carrier family 35 member F3	protein-coding	16	2.91	5.498281787	4.98E-06
chr1-5027	chr1	235034799	235035799	+	16	1000	Intergenic	Intergenic	64447	NR_125945	101927851	Hs.520684	NR_125945	ENSG00000238005	LOC101927851	-	uncharacterized LOC101927851	ncRNA	16	3.88	4.12371134	7.91E-05
chr1-5028	chr1	235746342	235747342	+	15.4	1000	"intron (NM_004485, intron 2 of 2)"	"intron (NM_004485, intron 2 of 2)"	66451	NM_001098722	2786	Hs.159711	NM_004485	ENSG00000168243	GNG4	-	G protein subunit gamma 4	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-5033	chr1	236864873	236866170	+	18.6	1297	"intron (NM_001278344, intron 1 of 22)"	"intron (NM_001278344, intron 1 of 22)"	15767	NM_001103	88	Hs.498178	NM_001103	ENSG00000077522	ACTN2	CMD1AA|CMH23	actinin alpha 2	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr1-5036	chr1	242175225	242176225	+	15.4	1000	Intergenic	Intergenic	-13340	NM_001004343	440738	Hs.534971	NM_001004343	ENSG00000197769	MAP1LC3C	ATG8J|LC3C	microtubule associated protein 1 light chain 3 gamma	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-5042	chr1	245712146	245713146	+	16	1000	"intron (NM_018012, intron 5 of 14)"	"intron (NM_018012, intron 5 of 14)"	394359	NM_018012	55083	Hs.143134	NM_018012	ENSG00000162849	KIF26B	-	kinesin family member 26B	protein-coding	16	1.94	8.24742268	7.67E-08
chr1-5045	chr1	873276	878807	+	128	5531	"intron (NM_152486, intron 7 of 13)"	CpG	14920	NM_152486	148398	Hs.335293	NM_152486	ENSG00000187634	SAMD11	MRS	sterile alpha motif domain containing 11	protein-coding	128.02	16.5	7.758787879	3.31E-53
chr1-5051	chr1	1906497	1909385	+	35.2	2888	"intron (NM_001304360, intron 6 of 38)"	MSTB|LTR|ERVL-MaLR	27335	NM_001304360	85452	Hs.232092	NM_001003808	ENSG00000142609	CFAP74	C1orf222|KIAA1751	cilia and flagella associated protein 74	protein-coding	35.2	6.8	5.176470588	2.10E-11
chr1-5055	chr1	1969058	1972053	+	43.5	2995	Intergenic	Intergenic	10954	NR_135509	105378591	Hs.371879	NR_135509	ENSG00000226969	LOC105378591	-	uncharacterized LOC105378591	ncRNA	43.53	7.77	5.602316602	3.96E-15
chr1-5066	chr1	2465675	2467779	+	30.7	2104	Intergenic	MIR|SINE|MIR	-5043	NM_001010926	388585	Hs.57971	NM_001010926	ENSG00000197921	HES5	bHLHb38	hes family bHLH transcription factor 5	protein-coding	30.72	3.88	7.917525773	3.25E-14
chr1-5068	chr1	2533511	2538678	+	69.1	5167	"intron (NM_033467, intron 9 of 23)"	"intron (NM_033467, intron 9 of 23)"	17905	NM_001195740	127281	Hs.462033	NM_152371	ENSG00000157870	FAM213B	C1orf93	family with sequence similarity 213 member B	protein-coding	69.13	8.74	7.909610984	5.90E-30
chr1-5069	chr1	2557383	2559883	+	42.2	2500	"intron (NM_033467, intron 2 of 23)"	L1MEg|LINE|L1	5848	NM_033467	79258	Hs.591453	NM_033467	ENSG00000142606	MMEL1	MMEL2|NEP2|NEPII|NL1|NL2|SEP	membrane metalloendopeptidase like 1	protein-coding	42.25	5.82	7.259450172	7.27E-18
chr1-5070	chr1	2615232	2616232	+	13.4	1000	"intron (NM_001242672, intron 4 of 6)"	"intron (NM_001242672, intron 4 of 6)"	-51251	NM_033467	79258	Hs.591453	NM_033467	ENSG00000142606	MMEL1	MMEL2|NEP2|NEPII|NL1|NL2|SEP	membrane metalloendopeptidase like 1	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr1-5071	chr1	2621330	2622330	+	14.1	1000	"intron (NM_001242672, intron 4 of 6)"	"intron (NM_001242672, intron 4 of 6)"	-57349	NM_033467	79258	Hs.591453	NM_033467	ENSG00000142606	MMEL1	MMEL2|NEP2|NEPII|NL1|NL2|SEP	membrane metalloendopeptidase like 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr1-5074	chr1	2769993	2770993	+	14.7	1000	Intergenic	Intergenic	-64263	NM_001242672	100287898	Hs.632363	NM_001242672	ENSG00000215912	TTC34	-	tetratricopeptide repeat domain 34	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5075	chr1	2781163	2782163	+	15.4	1000	Intergenic	Intergenic	-75433	NM_001242672	100287898	Hs.632363	NM_001242672	ENSG00000215912	TTC34	-	tetratricopeptide repeat domain 34	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr1-5078	chr1	2898721	2900410	+	25.6	1689	Intergenic	Intergenic	-38481	NM_080431	140625	Hs.236635	NM_080431	ENSG00000169717	ACTRT2	ARPM2|ARPT2|Arp-T2|HARPM2	actin related protein T2	protein-coding	25.6	2.91	8.797250859	6.53E-13
chr1-5080	chr1	2933437	2934437	+	14.7	1000	Intergenic	Intergenic	-4109	NM_080431	140625	Hs.236635	NM_080431	ENSG00000169717	ACTRT2	ARPM2|ARPT2|Arp-T2|HARPM2	actin related protein T2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr1-5081	chr1	2974256	2975256	+	14.7	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	9533	NR_024371	440556	Hs.531041	NM_198543	ENSG00000177133	LINC00982	-	long intergenic non-protein coding RNA 982	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr1-509	chr1	24442795	24443795	+	22.4	1000	Intergenic	Intergenic	-4630	NM_152372	127294	Hs.523413	NM_152372	ENSG00000142661	MYOM3	-	myomesin 3	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr1-5091	chr1	3109331	3110331	+	15.4	1000	"intron (NM_199454, intron 2 of 16)"	"intron (NM_199454, intron 2 of 16)"	65292	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr1-5092	chr1	3114106	3115106	+	14.1	1000	"intron (NM_199454, intron 2 of 16)"	"intron (NM_199454, intron 2 of 16)"	70067	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	14.08	0	14.5040551	3.99E-13
chr1-5093	chr1	3117762	3120218	+	37.1	2456	"intron (NM_199454, intron 2 of 16)"	"intron (NM_199454, intron 2 of 16)"	74451	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	37.12	3.88	9.567010309	5.72E-19
chr1-510	chr1	25255385	25259399	+	64	4014	promoter-TSS (NM_004350)	promoter-TSS (NM_004350)	-622	NM_004350	864	Hs.170019	NM_004350	ENSG00000020633	RUNX3	AML2|CBFA3|PEBP2aC	runt related transcription factor 3	protein-coding	64.01	10.68	5.993445693	1.08E-22
chr1-5101	chr1	3165582	3166582	+	14.1	1000	"intron (NM_199454, intron 3 of 16)"	"intron (NM_199454, intron 3 of 16)"	121543	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	14.08	1.46	9.643835616	3.66E-08
chr1-5102	chr1	3222382	3223382	+	14.1	1000	"intron (NM_199454, intron 3 of 16)"	"intron (NM_199454, intron 3 of 16)"	-148265	NM_014448	27237	Hs.87435	NM_014448	ENSG00000130762	ARHGEF16	GEF16|NBR	Rho guanine nucleotide exchange factor 16	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr1-5104	chr1	3278894	3284412	+	77.4	5518	"intron (NM_199454, intron 3 of 16)"	"intron (NM_199454, intron 3 of 16)"	-89494	NM_014448	27237	Hs.87435	NM_014448	ENSG00000130762	ARHGEF16	GEF16|NBR	Rho guanine nucleotide exchange factor 16	protein-coding	77.45	11.16	6.939964158	6.20E-30
chr1-5106	chr1	3306833	3307833	+	15.4	1000	"intron (NM_199454, intron 4 of 16)"	"intron (NM_199454, intron 4 of 16)"	-63814	NM_014448	27237	Hs.87435	NM_014448	ENSG00000130762	ARHGEF16	GEF16|NBR	Rho guanine nucleotide exchange factor 16	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-5108	chr1	3344336	3345336	+	15.4	1000	"intron (NM_199454, intron 14 of 16)"	"intron (NM_199454, intron 14 of 16)"	-26311	NM_014448	27237	Hs.87435	NM_014448	ENSG00000130762	ARHGEF16	GEF16|NBR	Rho guanine nucleotide exchange factor 16	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-5111	chr1	3367329	3368329	+	14.1	1000	Intergenic	Intergenic	-3318	NM_014448	27237	Hs.87435	NM_014448	ENSG00000130762	ARHGEF16	GEF16|NBR	Rho guanine nucleotide exchange factor 16	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr1-5112	chr1	3533379	3534687	+	22.4	1308	Intergenic	L1PA11|LINE|L1	-5974	NM_001409	1953	Hs.593645	NM_001409	ENSG00000162591	MEGF6	EGFL3	multiple EGF like domains 6	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr1-5113	chr1	3607497	3608497	+	14.7	1000	"intron (NM_001126242, intron 1 of 10)"	"intron (NM_001126242, intron 1 of 10)"	761	NM_001126240	7161	Hs.192132	NM_005427	ENSG00000078900	TP73	P73	tumor protein p73	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-5114	chr1	3669677	3670677	+	14.7	1000	"intron (NM_152492, intron 1 of 11)"	AluSp|SINE|Alu	1212	NM_152492	148870	Hs.348700	NM_152492	ENSG00000162592	CCDC27	-	coiled-coil domain containing 27	protein-coding	14.72	0	15.16333034	3.99E-13
chr1-5116	chr1	3998806	3999806	+	14.7	1000	Intergenic	Intergenic	-1366	NR_040065	728716	Hs.668359	NR_040065		LINC01346	-	long intergenic non-protein coding RNA 1346	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr1-5119	chr1	4042073	4045049	+	39.7	2976	Intergenic	Intergenic	42889	NR_040065	728716	Hs.668359	NR_040065		LINC01346	-	long intergenic non-protein coding RNA 1346	ncRNA	39.69	6.8	5.836764706	2.14E-14
chr1-512	chr1	26103109	26104391	+	24.3	1282	"intron (NM_020379, intron 8 of 11)"	"intron (NM_020379, intron 8 of 11)"	-22917	NM_020451	57190	Hs.323396	NM_020451	ENSG00000162430	SELENON	CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1	selenoprotein N	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr1-5127	chr1	4743424	4744424	+	14.7	1000	"intron (NM_001042478, intron 1 of 5)"	"intron (NM_001042478, intron 1 of 5)"	28819	NM_018836	55966	Hs.12473	NM_018836	ENSG00000196581	AJAP1	MOT8|SHREW-1|SHREW1	adherens junctions associated protein 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-5129	chr1	7068788	7070561	+	28.2	1773	"intron (NM_015215, intron 3 of 22)"	"intron (NM_015215, intron 3 of 22)"	224290	NR_038934	23261	Hs.397705	NM_015215	ENSG00000171735	CAMTA1	CANPMR	calmodulin binding transcription activator 1	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr1-5131	chr1	7295680	7297251	+	23.7	1571	"intron (NM_015215, intron 4 of 22)"	"intron (NM_015215, intron 4 of 22)"	451081	NR_038934	23261	Hs.397705	NM_015215	ENSG00000171735	CAMTA1	CANPMR	calmodulin binding transcription activator 1	protein-coding	23.68	2.43	9.744855967	2.61E-12
chr1-5135	chr1	7315276	7316276	+	14.1	1000	"intron (NM_015215, intron 5 of 22)"	"intron (NM_015215, intron 5 of 22)"	470392	NR_038934	23261	Hs.397705	NM_015215	ENSG00000171735	CAMTA1	CANPMR	calmodulin binding transcription activator 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr1-5136	chr1	7342356	7343356	+	14.1	1000	"intron (NM_015215, intron 5 of 22)"	"intron (NM_015215, intron 5 of 22)"	-488473	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	14.08	0	14.5040551	3.99E-13
chr1-5137	chr1	7390481	7391481	+	14.7	1000	"intron (NM_015215, intron 5 of 22)"	"intron (NM_015215, intron 5 of 22)"	-440348	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5138	chr1	7407689	7410291	+	36.5	2602	"intron (NM_015215, intron 5 of 22)"	"intron (NM_015215, intron 5 of 22)"	-422339	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	36.48	4.85	7.521649485	1.37E-15
chr1-5139	chr1	7439100	7440100	+	14.1	1000	"intron (NM_015215, intron 5 of 22)"	"intron (NM_015215, intron 5 of 22)"	-391729	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr1-5140	chr1	7494485	7495485	+	16.6	1000	"intron (NM_015215, intron 5 of 22)"	AluJb|SINE|Alu	-336344	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr1-5142	chr1	7511162	7512162	+	14.1	1000	"intron (NM_015215, intron 5 of 22)"	L2b|LINE|L2	-319667	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr1-5144	chr1	7528057	7532535	+	67.8	4478	"intron (NM_015215, intron 6 of 22)"	"intron (NM_015215, intron 6 of 22)"	-301033	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	67.85	10.68	6.352996255	4.41E-25
chr1-5145	chr1	7535698	7536982	+	21.8	1284	"intron (NM_015215, intron 6 of 22)"	"intron (NM_015215, intron 6 of 22)"	-294989	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr1-5146	chr1	7542915	7544338	+	17.9	1423	"intron (NM_015215, intron 6 of 22)"	"intron (NM_015215, intron 6 of 22)"	-287703	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr1-5153	chr1	7691850	7695033	+	53.1	3183	"intron (NM_015215, intron 6 of 22)"	"intron (NM_015215, intron 6 of 22)"	-137888	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	53.13	5.82	9.128865979	3.37E-25
chr1-5155	chr1	7972753	7973753	+	14.7	1000	Intergenic	LTR36|LTR|ERV1	29972	NM_001561	3604	Hs.86447	NM_001561	ENSG00000049249	TNFRSF9	4-1BB|CD137|CDw137|ILA	TNF receptor superfamily member 9	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5158	chr1	8145390	8146390	+	15.4	1000	Intergenic	AluSq2|SINE|Alu	-59497	NM_018948	54206	Hs.605445	NM_018948	ENSG00000116285	ERRFI1	GENE-33|MIG-6|MIG6|RALT	ERBB receptor feedback inhibitor 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-5160	chr1	8185462	8186462	+	14.1	1000	Intergenic	Intergenic	-82770	NR_125998	102724539	Hs.516816	NR_125998	ENSG00000227634	LINC01714	-	long intergenic non-protein coding RNA 1714	ncRNA	14.08	1.46	9.643835616	3.66E-08
chr1-5166	chr1	9211725	9212725	+	14.7	1000	promoter-TSS (NR_029610)	promoter-TSS (NR_029610)	-389	NR_029610	407040		NR_029610	ENSG00000228526	MIR34A	MIRN34A|miRNA34A|mir-34|mir-34a	microRNA 34a	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr1-5167	chr1	9226529	9227529	+	14.7	1000	"intron (NR_132742, intron 1 of 1)"	"intron (NR_132742, intron 1 of 1)"	-15193	NR_029610	407040		NR_029610	ENSG00000228526	MIR34A	MIRN34A|miRNA34A|mir-34|mir-34a	microRNA 34a	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr1-5172	chr1	10745285	10747549	+	32	2264	"intron (NM_017766, intron 4 of 15)"	"intron (NM_017766, intron 4 of 15)"	110316	NM_001079843	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	32	2.43	13.16872428	9.19E-20
chr1-5173	chr1	10761127	10767104	+	87.1	5977	"intron (NM_017766, intron 3 of 15)"	"intron (NM_017766, intron 3 of 15)"	92618	NM_001079843	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	87.05	11.65	7.472103004	8.49E-36
chr1-5178	chr1	10831434	10832740	+	19.2	1306	"intron (NM_017766, intron 1 of 15)"	"intron (NM_017766, intron 1 of 15)"	24646	NM_001079843	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr1-5180	chr1	10866545	10867545	+	15.4	1000	Intergenic	(TCCA)n|Simple_repeat|Simple_repeat	-10312	NM_017766	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-5185	chr1	10941305	10942305	+	15.4	1000	Intergenic	L2a|LINE|L2	-85072	NM_017766	54897	Hs.439894	NM_017766	ENSG00000130940	CASZ1	CAS11|CST|SRG|ZNF693|dJ734G22.1	castor zinc finger 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-5186	chr1	11007729	11008729	+	14.7	1000	"exon (NM_001170754, exon 12 of 13)"	"exon (NM_001170754, exon 12 of 13)"	33865	NM_001170754	148345	Hs.127026	NM_173507	ENSG00000175262	C1orf127	-	chromosome 1 open reading frame 127	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5196	chr1	11950719	11951719	+	15.4	1000	Intergenic	Intergenic	-32227	NM_002521	4879	Hs.219140	NM_002521	ENSG00000120937	NPPB	BNP	natriuretic peptide B	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-5199	chr1	12115617	12116899	+	17.3	1282	Intergenic	AluJo|SINE|Alu	-7176	NM_001243	943	Hs.1314	NM_001243	ENSG00000120949	TNFRSF8	CD30|D1S166E|Ki-1	TNF receptor superfamily member 8	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr1-520	chr1	37665126	37666126	+	22.4	1000	Intergenic	AluJr|SINE|Alu	38462	NR_036217	100422898		NR_036217	ENSG00000264698	MIR4255	-	microRNA 4255	ncRNA	22.4	1.46	15.34246575	8.59E-15
chr1-5202	chr1	12778936	12779936	+	14.7	1000	"intron (NR_111984, intron 1 of 2)"	"intron (NR_111984, intron 1 of 2)"	3318	NR_111984	126767	Hs.464705	NM_001103169	ENSG00000188984	AADACL3	-	arylacetamide deacetylase like 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5204	chr1	12830252	12831611	+	26.9	1359	Intergenic	Intergenic	-4060	NM_001080830	390999	Hs.156406	NM_001080830	ENSG00000116726	PRAMEF12	-	PRAME family member 12	protein-coding	26.88	5.34	5.033707865	3.94E-09
chr1-5206	chr1	13181688	13182688	+	16	1000	TTS (NM_001136561)	TTS (NM_001136561)	2138	NM_001136561	440563	Hs.711869	NM_001136561	ENSG00000275774	HNRNPCL2	HNRNPCP5	heterogeneous nuclear ribonucleoprotein C-like 2	protein-coding	16	2.43	6.58436214	7.90E-07
chr1-5209	chr1	14157279	14158279	+	12.8	1000	Intergenic	Intergenic	81903	NM_001007257	7799	Hs.371823	NM_012231	ENSG00000116731	PRDM2	HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2	PR/SET domain 2	protein-coding	12.8	1.94	6.597938144	4.51E-06
chr1-521	chr1	38684237	38685237	+	22.4	1000	Intergenic	MIRb|SINE|MIR	-4298	NR_038928	339442	Hs.434245	NR_038928	ENSG00000237290	LINC01343	-	long intergenic non-protein coding RNA 1343	ncRNA	22.4	4.85	4.618556701	5.54E-07
chr1-5211	chr1	14841690	14842690	+	15.4	1000	Intergenic	Intergenic	-83023	NM_015209	23254	Hs.368823	NM_015209	ENSG00000189337	KAZN	KAZ	"kazrin, periplakin interacting protein"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-5213	chr1	15038324	15039324	+	14.7	1000	"intron (NM_201628, intron 1 of 14)"	L2a|LINE|L2	113611	NM_201628	23254	Hs.368823	NM_015209	ENSG00000189337	KAZN	KAZ	"kazrin, periplakin interacting protein"	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr1-5216	chr1	15150641	15151641	+	15.4	1000	"intron (NM_201628, intron 1 of 14)"	"intron (NM_201628, intron 1 of 14)"	-99484	NM_001018000	23254	Hs.368823	NM_015209	ENSG00000189337	KAZN	KAZ	"kazrin, periplakin interacting protein"	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-5218	chr1	15393383	15394383	+	14.7	1000	"3' UTR (NM_015209, exon 8 of 8)"	"3' UTR (NM_015209, exon 8 of 8)"	85077	NR_027136	200197	Hs.531424	NM_182534	ENSG00000175147	TMEM51-AS1	C1orf126	TMEM51 antisense RNA 1	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr1-5220	chr1	15476588	15481029	+	71	4441	promoter-TSS (NM_001136216)	promoter-TSS (NM_001136216)	152	NR_027136	200197	Hs.531424	NM_182534	ENSG00000175147	TMEM51-AS1	C1orf126	TMEM51 antisense RNA 1	ncRNA	71.05	15.53	4.575016098	2.24E-19
chr1-5222	chr1	15564270	15565270	+	14.7	1000	Intergenic	Intergenic	-8998	NM_052929	114827	Hs.659997	NM_052929	ENSG00000142621	FHAD1	-	forkhead associated phosphopeptide binding domain 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5230	chr1	16072268	16073652	+	18.6	1384	"intron (NM_001013641, intron 4 of 5)"	L2c|LINE|L2	3973	NM_001013641	388595	Hs.454828	NM_001013641	ENSG00000162460	TMEM82	-	transmembrane protein 82	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr1-5232	chr1	16309149	16310149	+	14.7	1000	Intergenic	ERVL-E-int|LTR|ERVL	-7022	NM_001242884	7709	Hs.433764	NM_003443	ENSG00000116809	ZBTB17	MIZ-1|ZNF151|ZNF60|pHZ-67	zinc finger and BTB domain containing 17	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5234	chr1	16415137	16416137	+	15.4	1000	Intergenic	Intergenic	-15510	NM_182623	348487	Hs.126825	NM_182623	ENSG00000185519	FAM131C	C1orf117	family with sequence similarity 131 member C	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-5235	chr1	16450853	16451853	+	15.4	1000	"3' UTR (NM_004431, exon 17 of 17)"	"3' UTR (NM_004431, exon 17 of 17)"	31251	NM_001329090	1969	Hs.171596	NM_004431	ENSG00000142627	EPHA2	ARCC2|CTPA|CTPP1|CTRCT6|ECK	EPH receptor A2	protein-coding	15.36	0	15.82260557	1.26E-14
chr1-5238	chr1	16860706	16861706	+	14.1	1000	"non-coding (NR_135764, exon 1 of 2)"	"non-coding (NR_135764, exon 1 of 2)"	941	NR_135764	100132147	Hs.645945	NR_135764	ENSG00000233421	LINC01783	-	long intergenic non-protein coding RNA 1783	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr1-5245	chr1	17092842	17094243	+	19.8	1401	Intergenic	Intergenic	-2567	NM_001271733	11223	Hs.349110	NM_001271733		MST1L	BRF-1|D1F15S1A|MSPL-7|MSPL7|MST1P9|MSTP7|MSTP9	macrophage stimulating 1 like	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr1-5248	chr1	17442855	17444422	+	25	1567	"intron (NM_007365, intron 1 of 15)"	"intron (NM_007365, intron 1 of 15)"	2310	NM_007365	11240	Hs.33455	NM_007365	ENSG00000117115	PADI2	PAD-H19|PAD2|PDI2	peptidyl arginine deiminase 2	protein-coding	24.96	2.91	8.577319588	5.77E-12
chr1-5250	chr1	17550931	17553229	+	30.7	2298	"intron (NM_013358, intron 4 of 15)"	MER91A|DNA|hAT-Tip100	20459	NM_013358	29943	Hs.412941	NM_013358	ENSG00000142623	PADI1	HPAD10|PAD1|PDI|PDI1	peptidyl arginine deiminase 1	protein-coding	30.72	6.31	4.868462758	6.13E-10
chr1-5254	chr1	17611103	17612103	+	14.1	1000	TTS (NM_016233)	TTS (NM_016233)	7219	NR_039768	100616188		NR_039768	ENSG00000266634	MIR3972	-	microRNA 3972	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr1-5255	chr1	17616293	17617293	+	15.4	1000	Intergenic	AluSx1|SINE|Alu	12409	NR_039768	100616188		NR_039768	ENSG00000266634	MIR3972	-	microRNA 3972	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr1-5256	chr1	17635978	17636978	+	15.4	1000	"intron (NM_012387, intron 1 of 15)"	"intron (NM_012387, intron 1 of 15)"	1788	NM_012387	23569	Hs.522969	NM_012387	ENSG00000159339	PADI4	PAD|PAD4|PADI5|PDI4|PDI5	peptidyl arginine deiminase 4	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-5258	chr1	17814556	17816237	+	23	1681	Intergenic	MER20|DNA|hAT-Charlie	-49146	NM_018715	55920	Hs.380857	NM_018715	ENSG00000179051	RCC2	TD-60	regulator of chromosome condensation 2	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr1-5262	chr1	17861605	17862605	+	14.1	1000	Intergenic	Intergenic	-4225	NR_137287	55160	Hs.443460	NM_018125	ENSG00000074964	ARHGEF10L	GrinchGEF	Rho guanine nucleotide exchange factor 10 like	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr1-5266	chr1	17974928	17975928	+	15.4	1000	"intron (NM_001319838, intron 11 of 17)"	"intron (NM_001319838, intron 11 of 17)"	30620	NM_001319838	55160	Hs.443460	NM_018125	ENSG00000074964	ARHGEF10L	GrinchGEF	Rho guanine nucleotide exchange factor 10 like	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-5268	chr1	18213679	18214679	+	14.1	1000	Intergenic	Intergenic	132371	NM_030812	81569	Hs.2149	NM_030812	ENSG00000117148	ACTL8	CT57	actin like 8	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr1-5270	chr1	18278377	18282203	+	49.3	3826	Intergenic	AluSx|SINE|Alu	-111861	NR_125946	101927876	Hs.522954	NR_125946	ENSG00000261781	LINC01654	-	long intergenic non-protein coding RNA 1654	ncRNA	49.29	5.82	8.469072165	2.31E-22
chr1-5275	chr1	18477213	18478213	+	15.4	1000	"intron (NM_032880, intron 1 of 9)"	MLT1J2|LTR|ERVL-MaLR	43473	NM_032880	84966	Hs.212511	NM_032880	ENSG00000117154	IGSF21	-	immunoglobin superfamily member 21	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-5276	chr1	18497650	18498650	+	13.4	1000	"intron (NM_032880, intron 1 of 9)"	MIR|SINE|MIR	63910	NM_032880	84966	Hs.212511	NM_032880	ENSG00000117154	IGSF21	-	immunoglobin superfamily member 21	protein-coding	13.44	0.49	27.42857143	1.16E-11
chr1-5278	chr1	18545383	18546925	+	21.8	1542	"intron (NM_032880, intron 1 of 9)"	"intron (NM_032880, intron 1 of 9)"	111914	NM_032880	84966	Hs.212511	NM_032880	ENSG00000117154	IGSF21	-	immunoglobin superfamily member 21	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr1-5288	chr1	18861742	18862742	+	15.4	1000	Intergenic	MIRb|SINE|MIR	54818	NM_152375	127707	Hs.406913	NM_152375	ENSG00000179023	KLHDC7A	-	kelch domain containing 7A	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-5292	chr1	18874755	18876473	+	24.3	1718	Intergenic	Intergenic	68190	NM_152375	127707	Hs.406913	NM_152375	ENSG00000179023	KLHDC7A	-	kelch domain containing 7A	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr1-5307	chr1	19191858	19193485	+	23	1627	Intergenic	Intergenic	-6516	NM_152232	80834	Hs.553548	NM_152232	ENSG00000179002	TAS1R2	GPR71|T1R2|TR2	taste 1 receptor member 2	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr1-531	chr1	65019747	65022675	+	54.4	2928	"intron (NM_001293274, intron 2 of 25)"	AluSx1|SINE|Alu	-24319	NR_039957	100616338		NR_039957	ENSG00000264470	MIR4794	-	microRNA 4794	ncRNA	54.41	7.77	7.002574003	1.47E-21
chr1-5313	chr1	19342307	19343307	+	15.4	1000	Intergenic	Intergenic	-59981	NM_001136265	126917	Hs.466625	NM_001136265	ENSG00000169991	IFFO2	-	intermediate filament family orphan 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-5314	chr1	19370574	19371902	+	19.2	1328	Intergenic	Intergenic	-88412	NM_001136265	126917	Hs.466625	NM_001136265	ENSG00000169991	IFFO2	-	intermediate filament family orphan 2	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr1-5318	chr1	20027150	20028150	+	14.7	1000	"intron (NM_181719, intron 13 of 15)"	MIRb|SINE|MIR	35870	NM_000871	3362	Hs.22180	NM_000871	ENSG00000158748	HTR6	5-HT6|5-HT6R	5-hydroxytryptamine receptor 6	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-5320	chr1	20282163	20283163	+	14.7	1000	Intergenic	L2a|LINE|L2	23489	NM_001161729	5320	Hs.466804	NM_000300	ENSG00000188257	PLA2G2A	MOM1|PLA2|PLA2B|PLA2L|PLA2S|PLAS1|sPLA2	phospholipase A2 group IIA	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5322	chr1	20303531	20304531	+	15.4	1000	"intron (NM_000300, intron 5 of 5)"	L2c|LINE|L2	2121	NM_001161729	5320	Hs.466804	NM_000300	ENSG00000188257	PLA2G2A	MOM1|PLA2|PLA2B|PLA2L|PLA2S|PLAS1|sPLA2	phospholipase A2 group IIA	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-5325	chr1	20418272	20419804	+	23.7	1532	TTS (NM_000929)	TTS (NM_000929)	22337	NM_000929	5322	Hs.319438	NM_000929	ENSG00000127472	PLA2G5	FRFB|GV-PLA2|PLA2-10|hVPLA(2)	phospholipase A2 group V	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr1-5328	chr1	20520471	20521471	+	14.7	1000	"3' UTR (NM_152376, exon 2 of 2)"	"3' UTR (NM_152376, exon 2 of 2)"	-7992	NR_110078	101928017	Hs.550803	NR_110078	ENSG00000225986	UBXN10-AS1	-	UBXN10 antisense RNA 1	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr1-5329	chr1	20539565	20542385	+	48.6	2820	Intergenic	Intergenic	-27996	NR_110078	101928017	Hs.550803	NR_110078	ENSG00000225986	UBXN10-AS1	-	UBXN10 antisense RNA 1	ncRNA	48.65	6.8	7.154411765	3.87E-20
chr1-5332	chr1	20562243	20563243	+	14.7	1000	Intergenic	Intergenic	-49764	NR_110078	101928017	Hs.550803	NR_110078	ENSG00000225986	UBXN10-AS1	-	UBXN10 antisense RNA 1	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr1-5336	chr1	20637166	20638166	+	15.4	1000	"intron (NM_001039500, intron 2 of 21)"	AluJb|SINE|Alu	20254	NM_001039500	127731	Hs.205178	NM_144623	ENSG00000158816	VWA5B1	-	von Willebrand factor A domain containing 5B1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-5338	chr1	20684460	20686009	+	21.8	1549	Intergenic	Intergenic	67822	NM_001039500	127731	Hs.205178	NM_144623	ENSG00000158816	VWA5B1	-	von Willebrand factor A domain containing 5B1	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr1-534	chr1	94711843	94714570	+	58.9	2727	"5' UTR (NM_001328665, exon 1 of 22)"	"5' UTR (NM_001328665, exon 1 of 22)"	110	NM_001328665	9411	Hs.483238	NM_004815	ENSG00000137962	ARHGAP29	PARG1	Rho GTPase activating protein 29	protein-coding	58.89	7.77	7.579150579	5.01E-25
chr1-5340	chr1	20724896	20727341	+	42.9	2445	"intron (NR_033887, intron 4 of 11)"	MIRb|SINE|MIR	29169	NR_033887	339505	Hs.633269	NR_033887		LINC01141	-	long intergenic non-protein coding RNA 1141	ncRNA	42.89	5.82	7.369415808	7.27E-18
chr1-5350	chr1	21686391	21687391	+	14.7	1000	Intergenic	AluY|SINE|Alu	-14857	NM_001113348	1889	Hs.195080	NM_001397	ENSG00000117298	ECE1	ECE	endothelin converting enzyme 1	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr1-5351	chr1	21824641	21825641	+	14.1	1000	Intergenic	Intergenic	-10710	NM_001127501	249	Hs.75431	NM_000478	ENSG00000162551	ALPL	AP-TNAP|APTNAP|HOPS|TNAP|TNSALP	"alkaline phosphatase, liver/bone/kidney"	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr1-5355	chr1	22168550	22169550	+	14.1	1000	"intron (NM_001291860, intron 67 of 96)"	MIR3|SINE|MIR	30292	NM_001013693	401944	Hs.745158	NM_001013693	ENSG00000187942	LDLRAD2	-	low density lipoprotein receptor class A domain containing 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr1-5362	chr1	22644919	22648442	+	51.2	3523	Intergenic	MIR|SINE|MIR	53948	NR_039613	100616433		NR_039613	ENSG00000266564	MIR4418	-	microRNA 4418	ncRNA	51.21	8.74	5.859267735	3.69E-18
chr1-5363	chr1	22670772	22671772	+	15.4	1000	Intergenic	L1MD3|LINE|L1	78540	NR_039613	100616433		NR_039613	ENSG00000266564	MIR4418	-	microRNA 4418	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr1-5366	chr1	22681700	22682700	+	15.4	1000	Intergenic	MLT1K|LTR|ERVL-MaLR	89468	NR_039613	100616433		NR_039613	ENSG00000266564	MIR4418	-	microRNA 4418	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr1-5370	chr1	22978380	22979380	+	14.7	1000	promoter-TSS (NM_000491)	promoter-TSS (NM_000491)	-594	NM_000491	713	Hs.8986	NM_000491	ENSG00000173369	C1QB	-	complement C1q B chain	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr1-5371	chr1	23015886	23016886	+	15.4	1000	Intergenic	MIR3|SINE|MIR	-20945	NM_004442	2048	Hs.380705	NM_004442	ENSG00000133216	EPHB2	CAPB|DRT|EK5|EPHT3|ERK|Hek5|PCBC|Tyro5	EPH receptor B2	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr1-5372	chr1	23050694	23055312	+	59.5	4618	"intron (NM_017449, intron 1 of 15)"	AluSz|SINE|Alu	6993	NR_039832	100616391		NR_039832	ENSG00000265422	MIR4684	-	microRNA 4684	ncRNA	59.53	10.19	5.842001963	2.14E-20
chr1-5374	chr1	23062475	23063754	+	21.1	1279	"intron (NM_017449, intron 1 of 15)"	"intron (NM_017449, intron 1 of 15)"	17104	NR_039832	100616391		NR_039832	ENSG00000265422	MIR4684	-	microRNA 4684	ncRNA	21.12	4.37	4.832951945	6.64E-07
chr1-5375	chr1	23097952	23098952	+	14.1	1000	"intron (NM_017449, intron 1 of 15)"	MIRc|SINE|MIR	52442	NR_039832	100616391		NR_039832	ENSG00000265422	MIR4684	-	microRNA 4684	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr1-5377	chr1	23101032	23103113	+	32	2081	"intron (NM_017449, intron 1 of 15)"	"intron (NM_017449, intron 1 of 15)"	56062	NR_039832	100616391		NR_039832	ENSG00000265422	MIR4684	-	microRNA 4684	ncRNA	32	4.85	6.597938144	5.03E-13
chr1-5379	chr1	23160134	23162553	+	31.4	2419	"intron (NM_017449, intron 3 of 15)"	AluSz|SINE|Alu	28376	NR_036214	100422914		NR_036214	ENSG00000264014	MIR4253	-	microRNA 4253	ncRNA	31.36	1.94	16.16494845	8.26E-21
chr1-5380	chr1	23166531	23167531	+	15.4	1000	"intron (NM_017449, intron 3 of 15)"	AluSz6|SINE|Alu	22688	NR_036214	100422914		NR_036214	ENSG00000264014	MIR4253	-	microRNA 4253	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr1-5385	chr1	23296046	23297046	+	15.4	1000	Intergenic	MIR3|SINE|MIR	-4623	NM_001289974	646262		NM_001289974	ENSG00000215906	LACTBL1	-	lactamase beta like 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-5386	chr1	23329167	23330167	+	14.7	1000	Intergenic	HERVH-int|LTR|ERV1	12676	NM_001242521	729059	Hs.236896	NM_001242521	ENSG00000227868	C1orf234	-	chromosome 1 open reading frame 234	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5403	chr1	24522171	24523171	+	15.4	1000	Intergenic	Intergenic	-4059	NR_027087	284632	Hs.638906	NR_027087	ENSG00000230023	LOC284632	-	uncharacterized LOC284632	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr1-5404	chr1	24544552	24545552	+	14.1	1000	Intergenic	MER20|DNA|hAT-Charlie	18322	NR_027087	284632	Hs.638906	NR_027087	ENSG00000230023	LOC284632	-	uncharacterized LOC284632	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr1-5406	chr1	24604509	24606194	+	26.9	1685	Intergenic	Intergenic	-40461	NM_198173	57822	Hs.657920	NM_021180	ENSG00000158055	GRHL3	SOM|TFCP2L4|VWS2	grainyhead like transcription factor 3	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr1-5409	chr1	24739446	24740446	+	14.7	1000	promoter-TSS (NM_001322854)	promoter-TSS (NM_001322854)	-31	NM_001322854	57185	Hs.523442	NM_020448	ENSG00000001461	NIPAL3	DJ462O23.2|NPAL3	NIPA like domain containing 3	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-5411	chr1	24909072	24910072	+	15.4	1000	"intron (NM_001010980, intron 1 of 3)"	"intron (NM_001010980, intron 1 of 3)"	27005	NM_001010980	400746	Hs.200253	NM_001010980	ENSG00000184454	NCMAP	C1orf130|MP11	non-compact myelin associated protein	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-5416	chr1	25364989	25365989	+	15.4	1000	Intergenic	Intergenic	15495	NR_039623	100616365		NR_039623	ENSG00000264371	MIR4425	-	microRNA 4425	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr1-5422	chr1	25869968	25871647	+	24.3	1679	"intron (NM_015627, intron 1 of 8)"	CpG	731	NM_015627	26119	Hs.590911	NM_015627	ENSG00000157978	LDLRAP1	ARH|ARH1|ARH2|FHCB1|FHCB2	low density lipoprotein receptor adaptor protein 1	protein-coding	24.32	2.43	10.00823045	2.59E-13
chr1-5433	chr1	26068367	26070686	+	43.5	2319	"intron (NM_020379, intron 2 of 11)"	"intron (NM_020379, intron 2 of 11)"	-57141	NM_020451	57190	Hs.323396	NM_020451	ENSG00000162430	SELENON	CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1	selenoprotein N	protein-coding	43.53	6.8	6.401470588	8.79E-17
chr1-5435	chr1	26075474	26077083	+	21.1	1609	"intron (NM_020379, intron 4 of 11)"	"intron (NM_020379, intron 4 of 11)"	-50389	NM_020451	57190	Hs.323396	NM_020451	ENSG00000162430	SELENON	CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1	selenoprotein N	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr1-5436	chr1	26096641	26099707	+	47.4	3066	"exon (NM_001289010, exon 8 of 12)"	"exon (NM_001289010, exon 8 of 12)"	-28493	NM_020451	57190	Hs.323396	NM_020451	ENSG00000162430	SELENON	CFTD|MDRS1|RSMD1|RSS|SELN|SEPN1	selenoprotein N	protein-coding	47.37	11.65	4.066094421	3.24E-12
chr1-5448	chr1	26550701	26551701	+	14.1	1000	promoter-TSS (NR_110698)	promoter-TSS (NR_110698)	-610	NR_110698	101928303	Hs.375067	NR_110698	ENSG00000236155	LOC101928303	-	uncharacterized LOC101928303	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr1-5454	chr1	27319070	27320070	+	14.1	1000	promoter-TSS (NM_001013642)	promoter-TSS (NM_001013642)	-625	NM_001013642	388610	Hs.355747	NM_001013642	ENSG00000253368	TRNP1	C1orf225|TNRP	TMF1-regulated nuclear protein 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr1-5456	chr1	29656124	29657980	+	28.2	1856	"non-coding (NR_110758, exon 3 of 3)"	"non-coding (NR_110758, exon 3 of 3)"	19574	NR_110758	101928460	Hs.434659	NR_110758	ENSG00000230523	LINC01756	-	long intergenic non-protein coding RNA 1756	ncRNA	28.16	1.46	19.28767123	5.10E-21
chr1-5459	chr1	29684047	29685047	+	14.7	1000	Intergenic	AluY|SINE|Alu	-7921	NR_110758	101928460	Hs.434659	NR_110758	ENSG00000230523	LINC01756	-	long intergenic non-protein coding RNA 1756	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr1-5460	chr1	29696360	29697360	+	15.4	1000	Intergenic	MLT1H|LTR|ERVL-MaLR	-20234	NR_110758	101928460	Hs.434659	NR_110758	ENSG00000230523	LINC01756	-	long intergenic non-protein coding RNA 1756	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr1-5461	chr1	29731540	29732540	+	14.1	1000	Intergenic	MSTA-int|LTR|ERVL-MaLR	-55414	NR_110758	101928460	Hs.434659	NR_110758	ENSG00000230523	LINC01756	-	long intergenic non-protein coding RNA 1756	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr1-5468	chr1	30277991	30278991	+	14.7	1000	Intergenic	Intergenic	231968	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr1-5470	chr1	30404367	30405868	+	23	1501	Intergenic	MIRb|SINE|MIR	105342	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	23.04	2.91	7.917525773	4.85E-11
chr1-5475	chr1	30579355	30580711	+	23.7	1356	Intergenic	Intergenic	-69574	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	23.68	4.85	4.882474227	1.15E-07
chr1-5476	chr1	30600271	30601271	+	13.4	1000	Intergenic	Intergenic	-90312	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr1-5478	chr1	30698257	30699257	+	14.7	1000	Intergenic	Intergenic	-188298	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr1-5479	chr1	30741683	30742683	+	14.7	1000	Intergenic	L2b|LINE|L2	-231724	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr1-5480	chr1	30751216	30752520	+	19.2	1304	Intergenic	Intergenic	-241409	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr1-5484	chr1	31063123	31065448	+	32	2325	Intergenic	L1M3|LINE|L1	-127334	NR_034182	100129196	Hs.659751	NR_034182	ENSG00000186056	MATN1-AS1	-	MATN1 antisense RNA 1	ncRNA	32	6.8	4.705882353	5.32E-10
chr1-5486	chr1	31075312	31076312	+	15.4	1000	Intergenic	MLT1A0|LTR|ERVL-MaLR	-115807	NR_034182	100129196	Hs.659751	NR_034182	ENSG00000186056	MATN1-AS1	-	MATN1 antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr1-5487	chr1	31077948	31078948	+	14.1	1000	Intergenic	Intergenic	-113171	NR_034182	100129196	Hs.659751	NR_034182	ENSG00000186056	MATN1-AS1	-	MATN1 antisense RNA 1	ncRNA	14.08	1.46	9.643835616	3.66E-08
chr1-5490	chr1	31167533	31171431	+	55	3898	Intergenic	Intergenic	-22137	NR_034182	100129196	Hs.659751	NR_034182	ENSG00000186056	MATN1-AS1	-	MATN1 antisense RNA 1	ncRNA	55.05	7.77	7.084942085	2.06E-22
chr1-5495	chr1	31278147	31280626	+	41.6	2479	Intergenic	Intergenic	-48703	NM_006762	7805	Hs.371021	NM_006762	ENSG00000162511	LAPTM5	CLAST6	lysosomal protein transmembrane 5	protein-coding	41.61	4.85	8.579381443	3.22E-19
chr1-5503	chr1	31334134	31341512	+	94.7	7378	Intergenic	Intergenic	43657	NM_014654	9672	Hs.158287	NM_014654	ENSG00000162512	SDC3	SDCN|SYND3	syndecan 3	protein-coding	94.73	23.3	4.065665236	8.73E-23
chr1-5504	chr1	31374312	31375312	+	14.7	1000	"intron (NM_014654, intron 1 of 4)"	MIRb|SINE|MIR	6668	NM_014654	9672	Hs.158287	NM_014654	ENSG00000162512	SDC3	SDCN|SYND3	syndecan 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-5505	chr1	31710872	31712152	+	20.5	1280	"intron (NM_024522, intron 1 of 6)"	"intron (NM_024522, intron 1 of 6)"	1222	NM_024522	79570	Hs.470259	NM_024522	ENSG00000084628	NKAIN1	FAM77C	Sodium/potassium transporting ATPase interacting 1	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr1-5506	chr1	31874873	31875873	+	14.7	1000	Intergenic	AluSz|SINE|Alu	-7039	NM_001199038	347735	Hs.270655	NM_018565	ENSG00000168528	SERINC2	FKSG84|PRO0899|TDE2|TDE2L	serine incorporator 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5516	chr1	32247846	32248846	+	14.7	1000	Intergenic	Intergenic	-18682	NM_001294335	576	Hs.524138	NM_001703	ENSG00000121753	ADGRB2	BAI2	adhesion G protein-coupled receptor B2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-5519	chr1	33335684	33337885	+	37.8	2201	promoter-TSS (NM_001171940)	promoter-TSS (NM_001171940)	-370	NM_001171940	252995	Hs.524234	NM_153756	ENSG00000160097	FNDC5	FRCP2|irisin	fibronectin type III domain containing 5	protein-coding	37.76	3.88	9.731958763	5.72E-19
chr1-5523	chr1	33509007	33510007	+	15.4	1000	Intergenic	LTR19A|LTR|ERV1	-6995	NM_001319140	204	Hs.470907	NM_001625	ENSG00000004455	AK2	ADK2	adenylate kinase 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-5524	chr1	33583302	33584302	+	15.4	1000	"intron (NM_001301823, intron 8 of 8)"	"intron (NM_001301823, intron 8 of 8)"	36023	NM_001301826	113451	Hs.101807	NM_052998	ENSG00000142920	AZIN2	ADC|AZI2|AZIB1|ODC-p|ODC1L|ODCp	antizyme inhibitor 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-5525	chr1	33782587	33783587	+	17.3	1000	"intron (NM_001080438, intron 1 of 4)"	"intron (NM_001080438, intron 1 of 4)"	3612	NM_001080438	127550		NM_001080438	ENSG00000184389	A3GALT2	A3GALT2P|IGB3S|IGBS3S	"alpha 1,3-galactosyltransferase 2"	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr1-5526	chr1	33878400	33879400	+	14.7	1000	Intergenic	Intergenic	-37706	NM_198040	1912	Hs.524271	NM_004427	ENSG00000134686	PHC2	EDR2|HPH2|PH2	polyhomeotic homolog 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-5527	chr1	33890661	33891661	+	14.7	1000	Intergenic	Intergenic	-47071	NM_145238	7579	Hs.442705	NM_145238	ENSG00000121903	ZSCAN20	KOX29|ZFP-31|ZNF31|ZNF360	zinc finger and SCAN domain containing 20	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-553	chr1	153669791	153671190	+	24.3	1399	Intergenic	Intergenic	-8221	NR_107050	102466879		NR_107050	ENSG00000274940	MIR8083	hsa-mir-8083	microRNA 8083	ncRNA	24.32	3.88	6.268041237	6.68E-10
chr1-5532	chr1	34047489	34048489	+	14.7	1000	"intron (NM_001281956, intron 47 of 70)"	ERV3-16A3_I-int|LTR|ERVL	109757	NM_145238	7579	Hs.442705	NM_145238	ENSG00000121903	ZSCAN20	KOX29|ZFP-31|ZNF31|ZNF360	zinc finger and SCAN domain containing 20	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-5537	chr1	34437227	34438227	+	14.7	1000	"intron (NM_001281956, intron 3 of 70)"	"intron (NM_001281956, intron 3 of 70)"	103170	NR_038372	402779	Hs.666207	NR_038372	ENSG00000231163	CSMD2-AS1	-	CSMD2 antisense RNA 1	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr1-5539	chr1	34886193	34887193	+	14.7	1000	Intergenic	Intergenic	244140	NM_001134734	84970	Hs.194610	NM_032884	ENSG00000142698	C1orf94	-	chromosome 1 open reading frame 94	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr1-5540	chr1	34896828	34898236	+	21.8	1408	Intergenic	Intergenic	237763	NR_030278	693137		NR_030278	ENSG00000207941	MIR552	MIRN552|hsa-mir-552	microRNA 552	ncRNA	21.76	1.46	14.90410959	8.59E-15
chr1-5545	chr1	35367490	35368907	+	20.5	1417	"intron (NM_001080418, intron 3 of 11)"	"intron (NM_001080418, intron 3 of 11)"	26988	NM_001080418	58512	Hs.733945	NM_001080418	ENSG00000116544	DLGAP3	DAP3|SAPAP3	DLG associated protein 3	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr1-5546	chr1	36111702	36113350	+	26.9	1648	Intergenic	AluY|SINE|Alu	-5081	NM_002794	5690	Hs.471441	NM_002794	ENSG00000126067	PSMB2	HC7-I	proteasome subunit beta 2	protein-coding	26.88	1.94	13.8556701	2.90E-17
chr1-5547	chr1	36581089	36585506	+	71	4417	"intron (NM_001294347, intron 1 of 3)"	MIR|SINE|MIR	7388	NM_001294347	1296	Hs.353001	NM_005202	ENSG00000171812	COL8A2	FECD|FECD1|PPCD|PPCD2	collagen type VIII alpha 2 chain	protein-coding	71.05	12.62	5.629952456	2.28E-23
chr1-5550	chr1	36976876	36979059	+	33.3	2183	Intergenic	MLT1J|LTR|ERVL-MaLR	-29052	NM_156039	1441	Hs.524517	NM_000760	ENSG00000119535	CSF3R	CD114|GCSFR|SCN7	colony stimulating factor 3 receptor	protein-coding	33.28	7.77	4.283140283	1.68E-09
chr1-5553	chr1	37111738	37113614	+	26.9	1876	Intergenic	MER21C|LTR|ERVL	-163761	NM_156039	1441	Hs.524517	NM_000760	ENSG00000119535	CSF3R	CD114|GCSFR|SCN7	colony stimulating factor 3 receptor	protein-coding	26.88	5.82	4.618556701	1.71E-08
chr1-5555	chr1	37277280	37278280	+	15.4	1000	"intron (NM_000831, intron 13 of 15)"	"intron (NM_000831, intron 13 of 15)"	222064	NM_000831	2899	Hs.128848	NM_000831	ENSG00000163873	GRIK3	EAA5|GLR7|GLUR7|GluK3|GluR7a	glutamate ionotropic receptor kainate type subunit 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-5557	chr1	37308694	37309986	+	20.5	1292	"intron (NM_000831, intron 9 of 15)"	"intron (NM_000831, intron 9 of 15)"	190504	NM_000831	2899	Hs.128848	NM_000831	ENSG00000163873	GRIK3	EAA5|GLR7|GLUR7|GluK3|GluR7a	glutamate ionotropic receptor kainate type subunit 3	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr1-5564	chr1	37571916	37572916	+	13.4	1000	Intergenic	MIRb|SINE|MIR	-54748	NR_036217	100422898		NR_036217	ENSG00000264698	MIR4255	-	microRNA 4255	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr1-5566	chr1	37637051	37639441	+	33.9	2390	Intergenic	Intergenic	11082	NR_036217	100422898		NR_036217	ENSG00000264698	MIR4255	-	microRNA 4255	ncRNA	33.92	3.88	8.742268041	4.55E-16
chr1-5569	chr1	37772926	37774196	+	17.3	1270	Intergenic	Intergenic	146397	NR_036217	100422898		NR_036217	ENSG00000264698	MIR4255	-	microRNA 4255	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr1-5570	chr1	37837478	37838478	+	14.7	1000	Intergenic	Intergenic	102066	NR_038842	728431	Hs.380738	NR_038842	ENSG00000233621	LINC01137	-	long intergenic non-protein coding RNA 1137	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr1-5578	chr1	38594477	38595980	+	21.8	1503	Intergenic	Intergenic	40325	NR_037432	100500801		NR_037432	ENSG00000265596	MIR3659	mir-3659	microRNA 3659	ncRNA	21.76	1.94	11.21649485	8.00E-13
chr1-5580	chr1	38599728	38601373	+	23.7	1645	Intergenic	Intergenic	45647	NR_037432	100500801		NR_037432	ENSG00000265596	MIR3659	mir-3659	microRNA 3659	ncRNA	23.68	3.88	6.103092784	4.22E-09
chr1-5582	chr1	38679600	38681489	+	28.2	1889	promoter-TSS (NR_038928)	promoter-TSS (NR_038928)	-105	NR_038928	339442	Hs.434245	NR_038928	ENSG00000237290	LINC01343	-	long intergenic non-protein coding RNA 1343	ncRNA	28.16	5.82	4.838487973	3.50E-09
chr1-5583	chr1	38732113	38733113	+	15.4	1000	Intergenic	Intergenic	-52174	NR_038928	339442	Hs.434245	NR_038928	ENSG00000237290	LINC01343	-	long intergenic non-protein coding RNA 1343	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr1-5587	chr1	38958974	38960240	+	20.5	1266	Intergenic	AluSx1|SINE|Alu	-279168	NR_038928	339442	Hs.434245	NR_038928	ENSG00000237290	LINC01343	-	long intergenic non-protein coding RNA 1343	ncRNA	20.48	3.4	6.023529412	2.41E-08
chr1-5589	chr1	39006067	39007067	+	14.1	1000	Intergenic	MIR|SINE|MIR	318928	NM_022157	64121	Hs.532461	NM_022157	ENSG00000116954	RRAGC	GTR2|RAGC|TIB929	Ras related GTP binding C	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr1-5591	chr1	39087821	39088821	+	15.4	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	237174	NM_022157	64121	Hs.532461	NM_022157	ENSG00000116954	RRAGC	GTR2|RAGC|TIB929	Ras related GTP binding C	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-5594	chr1	39223115	39224115	+	12.8	1000	Intergenic	Intergenic	101880	NM_022157	64121	Hs.532461	NM_022157	ENSG00000116954	RRAGC	GTR2|RAGC|TIB929	Ras related GTP binding C	protein-coding	12.8	0.97	13.19587629	8.12E-09
chr1-5596	chr1	39294396	39296122	+	29.4	1726	Intergenic	Intergenic	30236	NM_022157	64121	Hs.532461	NM_022157	ENSG00000116954	RRAGC	GTR2|RAGC|TIB929	Ras related GTP binding C	protein-coding	29.44	5.82	5.058419244	6.85E-10
chr1-5601	chr1	40365968	40366968	+	14.7	1000	"3' UTR (NM_005376, exon 2 of 2)"	"3' UTR (NM_005376, exon 2 of 2)"	1219	NM_005376	4610	Hs.437922	NM_005376	ENSG00000116990	MYCL	L-Myc|LMYC|MYCL1|bHLHe38	v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-5602	chr1	41358401	41359401	+	15.4	1000	Intergenic	THE1D|LTR|ERVL-MaLR	-30883	NM_133467	163732	Hs.355820	NM_133467	ENSG00000179862	CITED4	-	Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-5604	chr1	41872728	41873728	+	14.7	1000	Intergenic	Intergenic	-31887	NR_135817	101929901		NR_135817	ENSG00000229901	LOC101929901	-	uncharacterized LOC101929901	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr1-5607	chr1	42582469	42583469	+	14.7	1000	Intergenic	L2a|LINE|L2	-36123	NM_007102	2981	Hs.32966	NM_007102	ENSG00000044012	GUCA2B	GCAP-II|UGN	guanylate cyclase activator 2B	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5613	chr1	43959777	43960777	+	15.4	1000	Intergenic	Intergenic	-31431	NM_001329137	5792	Hs.272062	NM_002840	ENSG00000142949	PTPRF	BNAH2|LAR	"protein tyrosine phosphatase, receptor type F"	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-5614	chr1	43970704	43971704	+	15.4	1000	Intergenic	Intergenic	-20504	NM_001329137	5792	Hs.272062	NM_002840	ENSG00000142949	PTPRF	BNAH2|LAR	"protein tyrosine phosphatase, receptor type F"	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-5616	chr1	44576020	44579207	+	51.8	3187	Intergenic	L1MD3|LINE|L1	-6909	NM_173484	128209	Hs.567674	NM_173484	ENSG00000171872	KLF17	ZNF393|Zfp393	Kruppel like factor 17	protein-coding	51.85	10.19	5.088321884	5.82E-16
chr1-5617	chr1	44586686	44587976	+	19.2	1290	"intron (NM_173484, intron 1 of 3)"	L1MC4|LINE|L1	2809	NM_173484	128209	Hs.567674	NM_173484	ENSG00000171872	KLF17	ZNF393|Zfp393	Kruppel like factor 17	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr1-5622	chr1	44974328	44975328	+	14.7	1000	"intron (NM_001319957, intron 1 of 13)"	"intron (NM_001319957, intron 1 of 13)"	-36337	NR_049849	100847089		NR_049849	ENSG00000263381	MIR5584	-	microRNA 5584	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr1-5625	chr1	45050365	45054366	+	56.3	4001	"intron (NM_001319957, intron 1 of 13)"	"intron (NM_001319957, intron 1 of 13)"	41200	NR_049849	100847089		NR_049849	ENSG00000263381	MIR5584	-	microRNA 5584	ncRNA	56.33	9.71	5.801235839	1.19E-19
chr1-563	chr1	183154567	183155567	+	22.4	1000	promoter-TSS (NM_005562)	promoter-TSS (NM_005562)	-107	NM_005562	3918	Hs.591484	NM_005562	ENSG00000058085	LAMC2	B2T|BM600|CSF|EBR2|EBR2A|LAMB2T|LAMNB2	laminin subunit gamma 2	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr1-5631	chr1	46244123	46245123	+	14.7	1000	Intergenic	Intergenic	-24656	NM_001324320	23139	Hs.319481	NM_015112	ENSG00000086015	MAST2	MAST205|MTSSK	microtubule associated serine/threonine kinase 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5633	chr1	46900901	46901901	+	15.4	1000	"intron (NR_045483, intron 2 of 8)"	AluSx1|SINE|Alu	1902	NR_045483	729041	Hs.170205	NR_045483		FAAHP1	-	fatty acid amide hydrolase pseudogene 1	pseudo	15.36	2.43	6.320987654	7.90E-07
chr1-5634	chr1	46909980	46910980	+	15.4	1000	"intron (NR_045483, intron 8 of 8)"	"intron (NR_045483, intron 8 of 8)"	4896	NR_121680	101929651	Hs.638707	NR_121680	ENSG00000224863	LINC01398	-	long intergenic non-protein coding RNA 1398	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr1-5637	chr1	46939132	46940132	+	15.4	1000	Intergenic	MIR|SINE|MIR	-24256	NR_121680	101929651	Hs.638707	NR_121680	ENSG00000224863	LINC01398	-	long intergenic non-protein coding RNA 1398	ncRNA	15.36	0	15.82260557	1.26E-14
chr1-5641	chr1	46995896	47001115	+	77.4	5219	Intergenic	Intergenic	-5863	NR_038403	100507423	Hs.601863	NR_038403	ENSG00000269956	MKNK1-AS1	-	MKNK1 antisense RNA 1	ncRNA	77.45	16.02	4.834581773	3.85E-22
chr1-5643	chr1	47913706	47914706	+	14.7	1000	Intergenic	Intergenic	-11217	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr1-5645	chr1	47974490	47975490	+	14.1	1000	Intergenic	Intergenic	-72001	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr1-5647	chr1	47984262	47985262	+	14.7	1000	Intergenic	Intergenic	-81773	NR_126355	102724077	Hs.159718	NR_126355		LINC01389	-	long intergenic non-protein coding RNA 1389	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr1-5652	chr1	48288148	48289148	+	14.7	1000	"intron (NM_001194986, intron 2 of 6)"	"intron (NM_001194986, intron 2 of 6)"	173914	NM_001194986	388630	Hs.61504	NM_001194986	ENSG00000269113	TRABD2B	TIKI2	TraB domain containing 2B	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5656	chr1	48341117	48342117	+	14.7	1000	"intron (NM_001194986, intron 2 of 6)"	"intron (NM_001194986, intron 2 of 6)"	120945	NM_001194986	388630	Hs.61504	NM_001194986	ENSG00000269113	TRABD2B	TIKI2	TraB domain containing 2B	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-5661	chr1	48550633	48551633	+	13.4	1000	Intergenic	MER30|DNA|hAT-Charlie	-88571	NM_001194986	388630	Hs.61504	NM_001194986	ENSG00000269113	TRABD2B	TIKI2	TraB domain containing 2B	protein-coding	13.44	0	13.84477987	1.16E-11
chr1-5662	chr1	48556084	48557084	+	15.4	1000	Intergenic	L1MEc|LINE|L1	91516	NR_026749	391037	Hs.585393	NR_026749		SKINT1L	BTN12|SKINT1|SKINTL|SKINTP	Skint1 like (pseudogene)	pseudo	15.36	3.4	4.517647059	2.25E-05
chr1-5664	chr1	49014582	49015582	+	14.7	1000	"intron (NM_001323573, intron 11 of 12)"	"intron (NM_001323573, intron 11 of 12)"	-77202	NM_019073	54558	Hs.538103	NM_019073	ENSG00000132122	SPATA6	HASH|SRF-1|SRF1	spermatogenesis associated 6	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5665	chr1	49083639	49084639	+	15.4	1000	"intron (NM_001323573, intron 9 of 12)"	MIR3|SINE|MIR	-146259	NM_019073	54558	Hs.538103	NM_019073	ENSG00000132122	SPATA6	HASH|SRF-1|SRF1	spermatogenesis associated 6	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-5672	chr1	53097382	53098923	+	23	1541	promoter-TSS (NR_135157)	promoter-TSS (NR_135157)	-864	NR_135157	348378	Hs.424589	NM_001042693	ENSG00000182183	FAM159A	PRO7171|WWLS2783	family with sequence similarity 159 member A	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr1-5673	chr1	53527975	53528975	+	14.1	1000	"intron (NM_153703, intron 1 of 10)"	CpG	751	NM_001199081	127435	Hs.586141	NM_153703	ENSG00000174348	PODN	PCAN|SLRR5A	podocan	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr1-5677	chr1	53866622	53867622	+	15.4	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	38571	NR_002314	163742	Hs.99394	NR_002314	ENSG00000236253	SLC25A3P1	-	solute carrier family 25 member 3 pseudogene 1	pseudo	15.36	3.4	4.517647059	2.25E-05
chr1-5679	chr1	53918996	53919996	+	15.4	1000	Intergenic	Intergenic	-5576	NM_033067	63948	Hs.131654	NM_033067	ENSG00000143006	DMRTB1	-	DMRT like family B with proline rich C-terminal 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-5681	chr1	54053439	54054439	+	14.7	1000	"intron (NM_147193, intron 3 of 9)"	"intron (NM_147193, intron 3 of 9)"	128867	NM_033067	63948	Hs.131654	NM_033067	ENSG00000143006	DMRTB1	-	DMRT like family B with proline rich C-terminal 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-5685	chr1	54184451	54185451	+	14.7	1000	"intron (NM_147193, intron 1 of 9)"	LTR78|LTR|ERV1	14926	NM_147193	148979	Hs.306691	NM_147193	ENSG00000174332	GLIS1	-	GLIS family zinc finger 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-5688	chr1	54966689	54967689	+	15.4	1000	Intergenic	Intergenic	-46618	NM_015547	26027	Hs.745173	NM_015547	ENSG00000162390	ACOT11	BFIT|STARD14|THEA|THEM1	acyl-CoA thioesterase 11	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-5689	chr1	55089195	55090195	+	15.4	1000	promoter-TSS (NM_176782)	promoter-TSS (NM_176782)	-495	NM_176782	338094	Hs.234786	NM_176782	ENSG00000162391	FAM151A	C1orf179	family with sequence similarity 151 member A	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr1-5693	chr1	55478777	55479777	+	15.4	1000	Intergenic	Intergenic	14660	NM_057176	7809	Hs.151291	NM_057176	ENSG00000162399	BSND	BART|DFNB73	barttin CLCNK type accessory beta subunit	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-5696	chr1	57040024	57042362	+	33.3	2338	"intron (NM_003713, intron 1 of 5)"	"intron (NM_003713, intron 1 of 5)"	4064	NM_003713	8613	Hs.405156	NM_003713	ENSG00000162407	PLPP3	Dri42|LPP3|PAP2B|PPAP2B|VCIP	phospholipid phosphatase 3	protein-coding	33.28	7.28	4.571428571	4.51E-10
chr1-5697	chr1	57044294	57045294	+	15.4	1000	"5' UTR (NM_003713, exon 1 of 6)"	"5' UTR (NM_003713, exon 1 of 6)"	463	NM_003713	8613	Hs.405156	NM_003713	ENSG00000162407	PLPP3	Dri42|LPP3|PAP2B|PPAP2B|VCIP	phospholipid phosphatase 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-5707	chr1	61352850	61353850	+	15.4	1000	Intergenic	L2c|LINE|L2	-62094	NR_110628	101926964	Hs.650459	NR_110628	ENSG00000231252	LOC101926964	-	uncharacterized LOC101926964	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr1-5712	chr1	62658878	62659878	+	13.4	1000	Intergenic	L2a|LINE|L2	-1096	NM_001164835	54596	Hs.685462	NM_019079	ENSG00000240563	L1TD1	ECAT11	LINE1 type transposase domain containing 1	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr1-5713	chr1	63462678	63463678	+	14.7	1000	Intergenic	Intergenic	213401	NM_032852	84938	Hs.7353	NM_032852	ENSG00000125703	ATG4C	APG4-C|APG4C|AUTL1|AUTL3	autophagy related 4C cysteine peptidase	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-5715	chr1	63622789	63623789	+	15.4	1000	Intergenic	MIR|SINE|MIR	159639	NR_038252	199899	Hs.116210	NR_038252	ENSG00000224209	LINC00466	-	long intergenic non-protein coding RNA 466	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr1-5717	chr1	64183743	64184743	+	15.4	1000	Intergenic	Intergenic	-55447	NM_005012	4919	Hs.128753	NM_005012	ENSG00000185483	ROR1	NTRKR1|dJ537F10.1	receptor tyrosine kinase like orphan receptor 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-5724	chr1	64692535	64693535	+	15.4	1000	"intron (NM_152489, intron 6 of 8)"	L1M5|LINE|L1	23734	NM_152489	148581	Hs.388746	NM_152489	ENSG00000177414	UBE2U	-	ubiquitin conjugating enzyme E2 U (putative)	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-5725	chr1	64823828	64824828	+	14.7	1000	Intergenic	Intergenic	-112148	NM_020925	57685	Hs.443891	NM_020925	ENSG00000158966	CACHD1	-	cache domain containing 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-5728	chr1	64961275	64963719	+	32	2444	"intron (NM_020925, intron 1 of 26)"	"intron (NM_020925, intron 1 of 26)"	-9100	NM_001293274	57685	Hs.443891	NM_020925	ENSG00000158966	CACHD1	-	cache domain containing 1	protein-coding	32	7.28	4.395604396	2.08E-09
chr1-5732	chr1	65003326	65004811	+	25	1485	"intron (NM_001293274, intron 1 of 25)"	AT_rich|Low_complexity|Low_complexity	32471	NM_001293274	57685	Hs.443891	NM_020925	ENSG00000158966	CACHD1	-	cache domain containing 1	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr1-5737	chr1	65069780	65070780	+	14.7	1000	"intron (NM_001293274, intron 4 of 25)"	"intron (NM_001293274, intron 4 of 25)"	24750	NR_039957	100616338		NR_039957	ENSG00000264470	MIR4794	-	microRNA 4794	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr1-5747	chr1	68292399	68293399	+	14.7	1000	"intron (NM_018841, intron 1 of 3)"	"intron (NM_018841, intron 1 of 3)"	-5072	NR_040077	100289178	Hs.677603	NR_040077	ENSG00000232284	GNG12-AS1	-	GNG12 antisense RNA 1	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr1-5748	chr1	68568511	68570064	+	26.9	1553	"intron (NR_040077, intron 6 of 9)"	"intron (NR_040077, intron 6 of 9)"	-51973	NM_004675	9077	Hs.194695	NM_004675	ENSG00000162595	DIRAS3	ARHI|NOEY2	DIRAS family GTPase 3	protein-coding	26.88	4.85	5.542268041	7.61E-10
chr1-5752	chr1	85514080	85515080	+	15.4	1000	promoter-TSS (NM_001253693)	promoter-TSS (NM_001253693)	-357	NM_018298	55283	Hs.535239	NM_018298	ENSG00000055732	MCOLN3	TRP-ML3|TRPML3	mucolipin 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-5753	chr1	85666013	85667013	+	14.7	1000	"exon (NM_032184, exon 1 of 7)"	"exon (NM_032184, exon 1 of 7)"	215	NM_032184	84144	Hs.533853	NM_032184	ENSG00000097096	SYDE2	-	synapse defective Rho GTPase homolog 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-5754	chr1	85701200	85702200	+	15.4	1000	Intergenic	Intergenic	23655	NM_198077	148423	Hs.26226	NM_198077	ENSG00000162642	C1orf52	gm117	chromosome 1 open reading frame 52	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-5762	chr1	87773886	87775716	+	26.9	1830	Intergenic	MIRb|SINE|MIR	-19350	NM_006769	8543	Hs.436792	NM_006769	ENSG00000143013	LMO4	-	LIM domain only 4	protein-coding	26.88	1.94	13.8556701	2.90E-17
chr1-5764	chr1	90622786	90624154	+	24.3	1368	Intergenic	Intergenic	162816	NM_182976	284695	Hs.306221	NM_181781	ENSG00000162664	ZNF326	ZAN75|ZIRD|Zfp326|dJ871E2.1	zinc finger protein 326	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr1-5770	chr1	91935626	91939815	+	49.9	4189	Intergenic	Intergenic	-28684	NM_003503	8317	Hs.533573	NM_003503	ENSG00000097046	CDC7	CDC7L1|HsCDC7|Hsk1|huCDC7	cell division cycle 7	protein-coding	49.93	11.65	4.28583691	1.79E-13
chr1-5772	chr1	93248921	93253088	+	80.7	4167	"intron (NM_005665, intron 1 of 17)"	CpG	6957	NM_005665	7813	Hs.594434	NM_005665	ENSG00000067208	EVI5	EVI-5|NB4S	ecotropic viral integration site 5	protein-coding	80.65	13.59	5.93451067	6.41E-28
chr1-5774	chr1	93254812	93255812	+	14.7	1000	"intron (NM_005665, intron 1 of 17)"	"intron (NM_005665, intron 1 of 17)"	2649	NM_005665	7813	Hs.594434	NM_005665	ENSG00000067208	EVI5	EVI-5|NB4S	ecotropic viral integration site 5	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5779	chr1	95055465	95057306	+	29.4	1841	Intergenic	Intergenic	-48972	NM_001993	2152	Hs.62192	NM_001993	ENSG00000117525	F3	CD142|TF|TFA	"coagulation factor III, tissue factor"	protein-coding	29.44	5.82	5.058419244	6.85E-10
chr1-5781	chr1	95158500	95159500	+	15.4	1000	"intron (NR_104131, intron 3 of 4)"	"intron (NR_104131, intron 3 of 4)"	52456	NR_039620	100616321		NR_039620	ENSG00000263526	MIR378G	-	microRNA 378g	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr1-5786	chr1	95377639	95378639	+	14.7	1000	"intron (NM_001839, intron 1 of 6)"	"intron (NM_001839, intron 1 of 6)"	13225	NM_001286056	1266	Hs.483454	NM_001839	ENSG00000117519	CNN3	-	calponin 3	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-5788	chr1	95697032	95698032	+	13.4	1000	"intron (NM_001199691, intron 7 of 7)"	"intron (NM_001199691, intron 7 of 7)"	2006	NR_125949	101928118	Hs.656443	NR_125948	ENSG00000226026	LOC101928118	-	uncharacterized LOC101928118	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr1-579	chr1	934446	936487	+	46.7	2041	promoter-TSS (NM_021170)	promoter-TSS (NM_021170)	86	NM_001142467	57801	Hs.154029	NM_021170	ENSG00000188290	HES4	bHLHb42	hes family bHLH transcription factor 4	protein-coding	46.73	6.31	7.40570523	1.95E-19
chr1-5814	chr1	111228146	111229146	+	14.1	1000	Intergenic	L2c|LINE|L2	-10991	NM_002232	3738	Hs.169948	NM_002232	ENSG00000177272	KCNA3	HGK5|HLK3|HPCN3|HUKIII|KV1.3|MK3|PCN3	potassium voltage-gated channel subfamily A member 3	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr1-5816	chr1	111899871	111900871	+	15.4	1000	Intergenic	Intergenic	11189	NR_125338	128344	Hs.172510	NM_181643	ENSG00000173947	PIFO	C1orf88|pitchfork	primary cilia formation	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-5817	chr1	111918736	111919736	+	14.1	1000	Intergenic	L1MA3|LINE|L1	13237	NR_029429	441897	Hs.568387	NR_029429	ENSG00000227179	PGCP1	-	progastricsin pseudogene 1	pseudo	14.08	2.91	4.838487973	2.67E-05
chr1-5825	chr1	112405323	112406323	+	15.4	1000	"intron (NM_004980, intron 2 of 7)"	MIRb|SINE|MIR	-6296	NR_046783	100874295	Hs.738190	NR_046783	ENSG00000232558	KCND3-IT1	-	KCND3 intronic transcript 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr1-5828	chr1	112453272	112454272	+	14.7	1000	TTS (NR_046619)	TTS (NR_046619)	1493	NR_046619	100873995	Hs.535274	NR_046619	ENSG00000237556	KCND3-AS1	-	KCND3 antisense RNA 1	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr1-5832	chr1	112533792	112534792	+	14.7	1000	"intron (NM_001270945, intron 1 of 1)"	"intron (NM_001270945, intron 1 of 1)"	1102	NM_001270945	643355	Hs.279714	NM_001270945		LINC01750	-	long intergenic non-protein coding RNA 1750	protein-coding	14.72	0	15.16333034	3.99E-13
chr1-5835	chr1	112903360	112904360	+	14.1	1000	Intergenic	ERV3-16A3_LTR|LTR|ERVL	-34940	NM_018704	55917	Hs.744100	NM_018704	ENSG00000143079	CTTNBP2NL	-	CTTNBP2 N-terminal like	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr1-5838	chr1	113042788	113047474	+	85.8	4686	"intron (NM_004185, intron 2 of 5)"	"intron (NM_004185, intron 2 of 5)"	-6239	NM_024494	7482	Hs.258575	NM_004185	ENSG00000134245	WNT2B	WNT13	Wnt family member 2B	protein-coding	85.77	12.13	7.070898599	6.75E-34
chr1-5844	chr1	115204774	115205774	+	15.4	1000	"intron (NM_001256404, intron 1 of 20)"	"intron (NM_001256404, intron 1 of 20)"	7458	NM_198459	163259	Hs.654928	NM_198459	ENSG00000175984	DENND2C	dJ1156J9.1	DENN domain containing 2C	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-5846	chr1	115767056	115768056	+	12.8	1000	Intergenic	Intergenic	113301	NM_002506	4803	Hs.2561	NM_002506	ENSG00000134259	NGF	Beta-NGF|HSAN5|NGFB	nerve growth factor	protein-coding	12.8	1.94	6.597938144	4.51E-06
chr1-5848	chr1	116262785	116263785	+	14.7	1000	"intron (NM_001232, intron 7 of 10)"	"intron (NM_001232, intron 7 of 10)"	48141	NM_001232	845	Hs.57975	NM_001232	ENSG00000118729	CASQ2	PDIB2	calsequestrin 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-5849	chr1	116452282	116453282	+	15.4	1000	Intergenic	AluSq|SINE|Alu	-9215	NR_125969	101928995	Hs.559119	NR_125969	ENSG00000228127	LINC01649	-	long intergenic non-protein coding RNA 1649	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr1-585	chr1	3303062	3304749	+	32.6	1687	"intron (NM_199454, intron 4 of 16)"	"intron (NM_199454, intron 4 of 16)"	-67242	NM_014448	27237	Hs.87435	NM_014448	ENSG00000130762	ARHGEF16	GEF16|NBR	Rho guanine nucleotide exchange factor 16	protein-coding	32.64	3.88	8.412371134	3.92E-15
chr1-5857	chr1	117448244	117449612	+	18.6	1368	Intergenic	L3b|LINE|CR1	-3617	NM_020440	5738	Hs.418093	NM_020440	ENSG00000134247	PTGFRN	CD315|CD9P-1|EWI-F|FPRP|SMAP-6	prostaglandin F2 receptor inhibitor	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr1-5862	chr1	117663367	117664367	+	13.4	1000	"5' UTR (NM_025188, exon 1 of 6)"	"5' UTR (NM_025188, exon 1 of 6)"	544	NM_001145635	80263	Hs.301526	NM_025188	ENSG00000134253	TRIM45	RNF99	tripartite motif containing 45	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr1-5865	chr1	118121387	118122387	+	14.1	1000	Intergenic	Intergenic	26505	NR_121626	100996263	Hs.202533	NR_121626	ENSG00000236866	LOC100996263	-	uncharacterized LOC100996263	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr1-5867	chr1	118239543	118240543	+	14.7	1000	Intergenic	MLT1J|LTR|ERVL-MaLR	91439	NM_017709	54855	Hs.356216	NM_017709	ENSG00000183508	FAM46C	-	family with sequence similarity 46 member C	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-5869	chr1	119461800	119462800	+	12.8	1000	"intron (NM_001330677, intron 5 of 7)"	"intron (NM_001330677, intron 5 of 7)"	68176	NM_001330677	6913	Hs.146196	NM_152380	ENSG00000092607	TBX15	TBX14	T-box 15	protein-coding	12.8	1.94	6.597938144	4.51E-06
chr1-5870	chr1	119524218	119525218	+	14.7	1000	"intron (NM_152380, intron 1 of 7)"	"intron (NM_152380, intron 1 of 7)"	5758	NM_001330677	6913	Hs.146196	NM_152380	ENSG00000092607	TBX15	TBX14	T-box 15	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-5871	chr1	119528211	119533856	+	103.1	5645	promoter-TSS (NM_001330677)	promoter-TSS (NM_001330677)	-557	NM_001330677	6913	Hs.146196	NM_152380	ENSG00000092607	TBX15	TBX14	T-box 15	protein-coding	103.05	11.65	8.845493562	9.28E-47
chr1-5872	chr1	119535418	119538125	+	44.8	2707	Intergenic	Intergenic	-4592	NM_152380	6913	Hs.146196	NM_152380	ENSG00000092607	TBX15	TBX14	T-box 15	protein-coding	44.81	5.82	7.699312715	1.25E-19
chr1-5873	chr1	119846553	119847553	+	14.7	1000	Intergenic	MIRc|SINE|MIR	-64346	NM_016527	51179	Hs.659767	NM_016527	ENSG00000116882	HAO2	GIG16|HAOX2	hydroxyacid oxidase 2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr1-5874	chr1	119854138	119855138	+	14.1	1000	Intergenic	Intergenic	-56761	NM_016527	51179	Hs.659767	NM_016527	ENSG00000116882	HAO2	GIG16|HAOX2	hydroxyacid oxidase 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr1-5876	chr1	119933078	119934078	+	15.4	1000	"intron (NM_016527, intron 5 of 7)"	"intron (NM_016527, intron 5 of 7)"	22009	NR_046780	100874270		NR_046780	ENSG00000230921	HAO2-IT1	-	HAO2 intronic transcript 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr1-5905	chr1	145559796	145560796	+	14.7	1000	"intron (NM_144698, intron 8 of 13)"	"intron (NM_144698, intron 8 of 13)"	11087	NM_144698	148741	Hs.710624	NM_144698	ENSG00000198483	ANKRD35	-	ankyrin repeat domain 35	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5906	chr1	146826570	146828369	+	27.5	1799	Intergenic	Intergenic	113178	NM_001256337	9557	Hs.191164	NM_004284	ENSG00000131778	CHD1L	ALC1|CHDL	chromodomain helicase DNA binding protein 1 like	protein-coding	27.52	1.94	14.18556701	2.90E-17
chr1-5910	chr1	147244460	147245460	+	14.1	1000	"intron (NM_005266, intron 1 of 1)"	"intron (NM_005266, intron 1 of 1)"	506	NM_005266	2702	Hs.447968	NM_005266	ENSG00000265107	GJA5	ATFB11|CX40	gap junction protein alpha 5	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr1-5911	chr1	147735374	147736374	+	14.7	1000	"intron (NM_001037501, intron 18 of 19)"	U1|snRNA|snRNA	-16532	NR_120331	101927468	Hs.515867	NR_120331		LOC101927468	-	uncharacterized LOC101927468	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr1-5912	chr1	147803565	147804565	+	15.4	1000	"intron (NM_001037501, intron 18 of 19)"	LTR8|LTR|ERV1	2613	NR_049810	100847044		NR_049810	ENSG00000283676	MIR5087	-	microRNA 5087	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr1-5913	chr1	147808791	147809791	+	15.4	1000	"intron (NM_001037501, intron 18 of 19)"	LTR56|LTR|ERV1	-2613	NR_049810	100847044		NR_049810	ENSG00000283676	MIR5087	-	microRNA 5087	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr1-5914	chr1	151546633	151547633	+	14.1	1000	"intron (NM_001126337, intron 7 of 11)"	"intron (NM_001126337, intron 7 of 11)"	28861	NR_030280	693139		NR_030280	ENSG00000207606	MIR554	MIRN554|hsa-mir-554	microRNA 554	ncRNA	14.08	1.46	9.643835616	3.66E-08
chr1-5918	chr1	151821686	151822980	+	15.4	1294	"intron (NM_182578, intron 3 of 5)"	"intron (NM_182578, intron 3 of 5)"	3840	NM_182578	284486	Hs.132648	NM_182578	ENSG00000196407	THEM5	ACOT15	thioesterase superfamily member 5	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-5921	chr1	151993665	151994665	+	14.1	1000	"non-coding (NR_103561, exon 5 of 6)"	"non-coding (NR_103561, exon 5 of 6)"	3411	NR_103561	441908	Hs.656557	NR_103561		NBPF18P	-	"neuroblastoma breakpoint family member 18, pseudogene"	pseudo	14.08	0.97	14.51546392	5.60E-10
chr1-5924	chr1	152694767	152695767	+	14.7	1000	Intergenic	Intergenic	3269	NM_001024679	100129271	Hs.601077	NM_001024679	ENSG00000198854	C1orf68	LEP7|XP32	chromosome 1 open reading frame 68	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-5925	chr1	152800208	152801208	+	14.7	1000	TTS (NM_178348)	TTS (NM_178348)	759	NM_178348	353131	Hs.534645	NM_178348	ENSG00000186844	LCE1A	LEP1	late cornified envelope 1A	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-5926	chr1	153175756	153176756	+	15.4	1000	"intron (NM_001010857, intron 1 of 1)"	AT_rich|Low_complexity|Low_complexity	350	NM_001010857	149018	Hs.125785	NM_001010857	ENSG00000203784	LELP1	-	late cornified envelope like proline rich 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-5931	chr1	153480170	153481170	+	14.7	1000	Intergenic	LTR78|LTR|ERV1	28047	NM_014624	6277	Hs.275243	NM_014624	ENSG00000197956	S100A6	2A9|5B10|CABP|CACY|PRA	S100 calcium binding protein A6	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-5932	chr1	154377270	154381572	+	66.6	4302	"intron (NM_181359, intron 1 of 8)"	"intron (NM_181359, intron 1 of 8)"	1752	NM_181359	3570	Hs.135087	NM_000565	ENSG00000160712	IL6R	CD126|IL-6R-1|IL-6RA|IL6Q|IL6RA|IL6RQ|gp80	interleukin 6 receptor	protein-coding	66.57	13.59	4.898454746	8.51E-20
chr1-5933	chr1	154430939	154431939	+	14.7	1000	"intron (NM_000565, intron 9 of 9)"	"intron (NM_000565, intron 9 of 9)"	43087	NR_135169	126669	Hs.591481	NM_001010846	ENSG00000169291	SHE	-	Src homology 2 domain containing E	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-5934	chr1	154464131	154465131	+	14.1	1000	"intron (NR_135169, intron 2 of 5)"	"intron (NR_135169, intron 2 of 5)"	9895	NR_135169	126669	Hs.591481	NM_001010846	ENSG00000169291	SHE	-	Src homology 2 domain containing E	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr1-5935	chr1	154511484	154512484	+	15.4	1000	"intron (NM_182499, intron 6 of 12)"	AluSx1|SINE|Alu	-14101	NR_046668	100874097	Hs.608237	NR_046668	ENSG00000229780	UBE2Q1-AS1	-	UBE2Q1 antisense RNA 1	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr1-5937	chr1	154661250	154662250	+	15.4	1000	Intergenic	MLT1E1A|LTR|ERVL-MaLR	-61294	NM_001025107	103	Hs.12341	NM_001111	ENSG00000160710	ADAR	ADAR1|AGS6|DRADA|DSH|DSRAD|G1P1|IFI-4|IFI4|K88DSRBP|P136	"adenosine deaminase, RNA specific"	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-5950	chr1	155062450	155063450	+	13.4	1000	Intergenic	AluSp|SINE|Alu	11602	NM_004952	1944	Hs.516656	NM_004952	ENSG00000143590	EFNA3	EFL2|EPLG3|Ehk1-L|LERK3	ephrin A3	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr1-5951	chr1	155082698	155083974	+	20.5	1276	Intergenic	Intergenic	-17013	NM_004428	1942	Hs.516664	NM_004428	ENSG00000169242	EFNA1	B61|ECKLG|EFL1|EPLG1|LERK-1|LERK1|TNFAIP4	ephrin A1	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr1-5954	chr1	156089740	156090740	+	14.7	1000	"intron (NM_001282625, intron 4 of 12)"	"intron (NM_001282625, intron 4 of 12)"	-5668	NM_001282624	4000	Hs.594444	NM_005572	ENSG00000160789	LMNA	CDCD1|CDDC|CMD1A|CMT2B1|EMD2|FPL|FPLD|FPLD2|HGPS|IDC|LDP1|LFP|LGMD1B|LMN1|LMNC|LMNL1|MADA|PRO1	lamin A/C	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-5957	chr1	156336757	156337757	+	14.7	1000	Intergenic	Intergenic	-1723	NM_020407	57127	Hs.131835	NM_020407	ENSG00000132677	RHBG	SLC42A2	Rh family B glycoprotein (gene/pseudogene)	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-5959	chr1	156371532	156372532	+	14.1	1000	Intergenic	Intergenic	18189	NR_029691	407046		NR_029691	ENSG00000207933	MIR9-1	MIRN9-1|hsa-mir-9-1|miRNA9-1|mir-9-1	microRNA 9-1	ncRNA	14.08	1.46	9.643835616	3.66E-08
chr1-5960	chr1	156378081	156379521	+	20.5	1440	"intron (NM_006365, intron 4 of 6)"	"intron (NM_006365, intron 4 of 6)"	11420	NR_029691	407046		NR_029691	ENSG00000207933	MIR9-1	MIRN9-1|hsa-mir-9-1|miRNA9-1|mir-9-1	microRNA 9-1	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr1-5962	chr1	156401043	156406968	+	105.6	5925	Intergenic	Intergenic	-4665	NM_001320453	10485	Hs.380027	NM_006365	ENSG00000125462	C1orf61	CROC4	chromosome 1 open reading frame 61	protein-coding	105.61	21.36	4.94428839	2.52E-30
chr1-5977	chr1	156934570	156935570	+	15.4	1000	"intron (NM_014784, intron 10 of 39)"	"intron (NM_014784, intron 10 of 39)"	-29034	NR_030527	768220		NR_030527	ENSG00000211581	MIR765	MIRN765|hsa-mir-765|mir-765	microRNA 765	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr1-5978	chr1	156938033	156939307	+	16	1274	"intron (NM_014784, intron 9 of 39)"	"intron (NM_014784, intron 9 of 39)"	-32634	NR_030527	768220		NR_030527	ENSG00000211581	MIR765	MIRN765|hsa-mir-765|mir-765	microRNA 765	ncRNA	16	2.43	6.58436214	7.90E-07
chr1-5982	chr1	156983261	156984261	+	15.4	1000	"intron (NM_014784, intron 1 of 39)"	"intron (NM_014784, intron 1 of 39)"	31401	NM_198236	9826	Hs.516954	NM_014784	ENSG00000132694	ARHGEF11	GTRAP48|PDZ-RHOGEF	Rho guanine nucleotide exchange factor 11	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-5985	chr1	157188081	157189081	+	14.7	1000	Intergenic	Intergenic	-80198	NM_001145312	2117	Hs.105636	NM_005240	ENSG00000117036	ETV3	METS|PE-1|PE1|bA110J1.4	ETS variant 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-5991	chr1	157745301	157746301	+	15.4	1000	"intron (NM_001159488, intron 1 of 8)"	"intron (NM_001159488, intron 1 of 8)"	1121	NM_030764	79368	Hs.437393	NM_030764	ENSG00000132704	FCRL2	CD307b|FCRH2|IFGP4|IRTA4|SPAP1|SPAP1A|SPAP1B|SPAP1C	Fc receptor like 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-5992	chr1	157805204	157806204	+	14.7	1000	"exon (NM_005894, exon 3 of 6)"	"exon (NM_005894, exon 3 of 6)"	5930	NM_005894	922	Hs.134035	NM_005894	ENSG00000073754	CD5L	AIM|API6|CT-2|PRO229|SP-ALPHA|Spalpha|hAIM	CD5 molecule like	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr1-5996	chr1	159287836	159288836	+	14.7	1000	Intergenic	L1MA4|LINE|L1	-3887	NM_001004467	441911	Hs.553833	NM_001004467	ENSG00000196266	OR10J3	OR1-25|OR10J3P	olfactory receptor family 10 subfamily J member 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-600	chr1	22571506	22575611	+	71.7	4105	Intergenic	Intergenic	-19174	NR_039613	100616433		NR_039613	ENSG00000266564	MIR4418	-	microRNA 4418	ncRNA	71.69	17.47	4.103606182	8.04E-18
chr1-6001	chr1	159900558	159901558	+	14.7	1000	"intron (NM_001135050, intron 12 of 20)"	"intron (NM_001135050, intron 12 of 20)"	-5726	NM_003564	8407	Hs.517168	NM_003564	ENSG00000158710	TAGLN2	HA1756	transgelin 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-6002	chr1	159923865	159924865	+	15.4	1000	promoter-TSS (NM_033438)	promoter-TSS (NM_033438)	-321	NM_033438	89886	Hs.661712	NM_033438	ENSG00000162723	SLAMF9	CD2F-10|CD2F10|CD84-H1|CD84H1|SF2001	SLAM family member 9	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-6003	chr1	159933016	159934016	+	14.7	1000	"intron (NR_038849, intron 1 of 2)"	MER5A|DNA|hAT-Charlie	2502	NR_038849	100505633	Hs.445045	NR_038849	ENSG00000224259	LINC01133	-	long intergenic non-protein coding RNA 1133	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr1-6004	chr1	159970983	159971983	+	14.7	1000	Intergenic	Intergenic	30300	NM_145167	93183	Hs.552810	NM_145167	ENSG00000143315	PIGM	GPI-MT-I	phosphatidylinositol glycan anchor biosynthesis class M	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-6010	chr1	160145542	160146542	+	14.7	1000	"intron (NM_144699, intron 16 of 21)"	"intron (NM_144699, intron 16 of 21)"	-1159	NM_001001734	480	Hs.662219	NM_144699	ENSG00000132681	ATP1A4	ATP1A1|ATP1AL2	ATPase Na+/K+ transporting subunit alpha 4	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-6011	chr1	160367920	160371580	+	49.9	3660	promoter-TSS (NM_020335)	promoter-TSS (NM_020335)	-614	NM_020335	57216	Hs.99477	NM_020335	ENSG00000162738	VANGL2	LPP1|LTAP|STB1|STBM|STBM1	VANGL planar cell polarity protein 2	protein-coding	49.93	7.77	6.425997426	4.59E-19
chr1-6020	chr1	161373877	161374877	+	14.1	1000	Intergenic	LTR2C|LTR|ERV1	-36704	NM_001013625	257177	Hs.534593	NM_001013625	ENSG00000188931	CFAP126	C1orf192|Flattop|Fltp	cilia and flagella associated protein 126	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr1-6021	chr1	161459883	161460883	+	14.1	1000	Intergenic	HERVK14-int|LTR|ERVK	-14822	NM_021642	2212	Hs.352642	NM_021642	ENSG00000143226	FCGR2A	CD32|CD32A|CDw32|FCG2|FCGR2|FCGR2A1|FcGR|IGFR2	Fc fragment of IgG receptor IIa	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr1-6027	chr1	162831533	162832533	+	15.4	1000	"intron (NM_178550, intron 1 of 3)"	"intron (NM_178550, intron 1 of 3)"	6572	NM_178550	339512	Hs.407631	NM_178550	ENSG00000185860	CCDC190	C1orf110	coiled-coil domain containing 190	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-6031	chr1	164479947	164480947	+	14.7	1000	Intergenic	Intergenic	-48150	NM_001204963	5087	Hs.557097	NM_002585	ENSG00000185630	PBX1	-	PBX homeobox 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-6034	chr1	165301142	165302142	+	14.1	1000	"intron (NM_177398, intron 3 of 8)"	L1MEb|LINE|L1	23836	NM_001174069	4009	Hs.667312	NM_177398	ENSG00000162761	LMX1A	LMX1|LMX1.1	LIM homeobox transcription factor 1 alpha	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr1-6035	chr1	165356958	165357958	+	15.4	1000	Intergenic	Intergenic	-31506	NM_177398	4009	Hs.667312	NM_177398	ENSG00000162761	LMX1A	LMX1|LMX1.1	LIM homeobox transcription factor 1 alpha	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-6036	chr1	165364852	165365852	+	15.4	1000	Intergenic	LTR78B|LTR|ERV1	28869	NM_001256571	6258	Hs.26550	NM_006917	ENSG00000143171	RXRG	NR2B3|RXRC	retinoid X receptor gamma	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-6038	chr1	165369144	165370144	+	14.1	1000	TTS (NM_006917)	TTS (NM_006917)	24577	NM_001256571	6258	Hs.26550	NM_006917	ENSG00000143171	RXRG	NR2B3|RXRC	retinoid X receptor gamma	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr1-6041	chr1	165586747	165587747	+	14.1	1000	Intergenic	MLT1A0|LTR|ERVL-MaLR	-12863	NM_004528	4259	Hs.191734	NM_004528	ENSG00000143198	MGST3	GST-III	microsomal glutathione S-transferase 3	protein-coding	14.08	0	14.5040551	3.99E-13
chr1-6048	chr1	171226446	171227446	+	14.7	1000	promoter-TSS (NM_001282692)	promoter-TSS (NM_001282692)	-116	NM_001282692	2326	Hs.1424	NM_002021	ENSG00000010932	FMO1	-	flavin containing monooxygenase 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-6052	chr1	172623510	172624777	+	19.2	1267	Intergenic	Intergenic	-4005	NM_001302746	356	Hs.2007	NM_000639	ENSG00000117560	FASLG	ALPS1B|APT1LG1|APTL|CD178|CD95-L|CD95L|FASL|TNFSF6|TNLG1A	Fas ligand	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr1-6054	chr1	175023940	175024940	+	14.1	1000	Intergenic	Intergenic	-12554	NM_022093	63923	Hs.156369	NM_022093	ENSG00000120332	TNN	TN-W	tenascin N	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr1-6055	chr1	175035658	175036658	+	13.4	1000	promoter-TSS (NM_022093)	promoter-TSS (NM_022093)	-836	NM_022093	63923	Hs.156369	NM_022093	ENSG00000120332	TNN	TN-W	tenascin N	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr1-6058	chr1	175268828	175270123	+	17.9	1295	Intergenic	AluSp|SINE|Alu	-107246	NM_001162894	9674	Hs.518138	NM_014656	ENSG00000235750	KIAA0040	-	KIAA0040	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr1-6060	chr1	175584339	175585339	+	15.4	1000	"intron (NM_001328635, intron 1 of 22)"	"intron (NM_001328635, intron 1 of 22)"	127913	NM_003285	7143	Hs.659864	NM_003285	ENSG00000116147	TNR	TN-R	tenascin R	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr1-6062	chr1	176843073	176844572	+	19.2	1499	"intron (NM_207108, intron 21 of 21)"	MIR|SINE|MIR	154759	NR_030163	574441		NR_030163	ENSG00000202609	MIR488	MIRN488|hsa-mir-488|mir-488	microRNA 488	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr1-6065	chr1	178676845	178677845	+	14.7	1000	Intergenic	AluSx|SINE|Alu	-16937	NM_001286247	55103	Hs.632485	NM_018037	ENSG00000116191	RALGPS2	dJ595C2.1	Ral GEF with PH domain and SH3 binding motif 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-6069	chr1	179780245	179782521	+	35.8	2276	"intron (NM_173509, intron 3 of 4)"	"intron (NM_173509, intron 3 of 4)"	65558	NM_022347	163590	Hs.571797	NM_022347	ENSG00000169905	TOR1AIP2	IFRG15|LULL1|NET9	torsin 1A interacting protein 2	protein-coding	35.84	4.85	7.389690722	1.37E-15
chr1-6071	chr1	179797932	179798932	+	14.7	1000	Intergenic	Intergenic	48509	NM_022347	163590	Hs.571797	NM_022347	ENSG00000169905	TOR1AIP2	IFRG15|LULL1|NET9	torsin 1A interacting protein 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-6073	chr1	181144055	181145055	+	15.4	1000	"non-coding (NR_125966, exon 2 of 3)"	"non-coding (NR_125966, exon 2 of 3)"	935	NR_125966	101928973	Hs.637822	NR_125966	ENSG00000237292	LINC01732	-	long intergenic non-protein coding RNA 1732	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr1-6077	chr1	181569951	181570951	+	14.7	1000	"intron (NM_001205294, intron 6 of 45)"	L2a|LINE|L2	117765	NM_001205294	777	Hs.437444	NM_000721	ENSG00000198216	CACNA1E	BII|CACH6|CACNL1A6|Cav2.3|gm139	calcium voltage-gated channel subunit alpha1 E	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-6080	chr1	181875193	181876193	+	15.4	1000	Intergenic	Intergenic	155154	NM_001009992	127665	Hs.684328	NM_001009992	ENSG00000179930	ZNF648	-	zinc finger protein 648	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-6082	chr1	182043397	182044397	+	15.4	1000	Intergenic	L2a|LINE|L2	-13050	NM_001009992	127665	Hs.684328	NM_001009992	ENSG00000179930	ZNF648	-	zinc finger protein 648	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr1-6084	chr1	182440141	182441572	+	23.7	1431	"intron (NM_001137669, intron 4 of 21)"	L2a|LINE|L2	21600	NM_001137669	353299	Hs.121200	NM_032267	ENSG00000121446	RGSL1	RGSL|RGSL2	regulator of G-protein signaling like 1	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr1-6086	chr1	182667319	182668873	+	18.6	1554	Intergenic	Intergenic	-26029	NM_001102450	85397	Hs.20982	NM_033345	ENSG00000135824	RGS8	-	regulator of G-protein signaling 8	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr1-609	chr1	37242462	37243462	+	22.4	1000	Intergenic	Intergenic	256882	NM_000831	2899	Hs.128848	NM_000831	ENSG00000163873	GRIK3	EAA5|GLR7|GLUR7|GluK3|GluR7a	glutamate ionotropic receptor kainate type subunit 3	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr1-6095	chr1	183200849	183201849	+	14.7	1000	"exon (NM_005562, exon 13 of 23)"	"exon (NM_005562, exon 13 of 23)"	46175	NM_018891	3918	Hs.591484	NM_005562	ENSG00000058085	LAMC2	B2T|BM600|CSF|EBR2|EBR2A|LAMB2T|LAMNB2	laminin subunit gamma 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-6098	chr1	183265985	183266985	+	14.1	1000	"intron (NM_015039, intron 1 of 10)"	L1MD2|LINE|L1	7524	NM_170706	23057	Hs.497123	NM_015039	ENSG00000157064	NMNAT2	C1orf15|PNAT2	nicotinamide nucleotide adenylyltransferase 2	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr1-6100	chr1	184005826	184006826	+	15.4	1000	"exon (NM_015101, exon 1 of 12)"	"exon (NM_015101, exon 1 of 12)"	578	NM_001303420	23127	Hs.387995	NM_015101	ENSG00000198756	COLGALT2	C1orf17|GLT25D2	collagen beta(1-O)galactosyltransferase 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-6101	chr1	184742342	184743342	+	15.4	1000	Intergenic	MLT1H|LTR|ERVL-MaLR	-18801	NR_135118	80267	Hs.523811	NM_025191	ENSG00000116406	EDEM3	C1orf22	ER degradation enhancing alpha-mannosidase like protein 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-6102	chr1	184877512	184878512	+	15.4	1000	"intron (NM_052966, intron 1 of 13)"	"intron (NM_052966, intron 1 of 13)"	65706	NM_052966	116496	Hs.518662	NM_052966	ENSG00000135842	FAM129A	C1orf24|GIG39|NIBAN	family with sequence similarity 129 member A	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-6108	chr1	199896171	199898696	+	34.6	2525	Intergenic	AluY|SINE|Alu	-99297	NM_003822	2494	Hs.33446	NM_003822	ENSG00000116833	NR5A2	B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2	nuclear receptor subfamily 5 group A member 2	protein-coding	34.56	5.82	5.93814433	6.75E-13
chr1-611	chr1	38101449	38102749	+	25	1300	Intergenic	Intergenic	-1504	NM_001038633	284654	Hs.135015	NM_173640	ENSG00000169218	RSPO1	CRISTIN3|RSPO	R-spondin 1	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr1-6111	chr1	199912727	199915092	+	32	2365	Intergenic	AluSx1|SINE|Alu	-82821	NM_003822	2494	Hs.33446	NM_003822	ENSG00000116833	NR5A2	B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2	nuclear receptor subfamily 5 group A member 2	protein-coding	32	2.91	10.99656357	6.10E-18
chr1-6113	chr1	199926299	199927299	+	14.7	1000	Intergenic	Intergenic	-69931	NM_003822	2494	Hs.33446	NM_003822	ENSG00000116833	NR5A2	B1F|B1F2|CPF|FTF|FTZ-F1|FTZ-F1beta|LRH-1|LRH1|hB1F-2	nuclear receptor subfamily 5 group A member 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-6123	chr1	200890778	200893158	+	40.3	2380	Intergenic	Intergenic	28019	NM_001142569	55765	Hs.518997	NM_018265	ENSG00000163362	C1orf106	-	chromosome 1 open reading frame 106	protein-coding	40.33	6.8	5.930882353	2.14E-14
chr1-6124	chr1	201021282	201022748	+	20.5	1466	"intron (NM_000069, intron 31 of 43)"	"intron (NM_000069, intron 31 of 43)"	-29187	NM_001252102	23046	Hs.169182	NM_017596	ENSG00000116852	KIF21B	-	kinesin family member 21B	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr1-6127	chr1	201127601	201128601	+	15.4	1000	"intron (NM_001288564, intron 1 of 5)"	"intron (NM_001288564, intron 1 of 5)"	-4418	NM_001288568	252839	Hs.181444	NM_016456	ENSG00000116857	TMEM9	DERM4|TMEM9A	transmembrane protein 9	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-6128	chr1	201140274	201141274	+	14.7	1000	promoter-TSS (NM_001288564)	promoter-TSS (NM_001288564)	-64	NM_001288564	252839	Hs.181444	NM_016456	ENSG00000116857	TMEM9	DERM4|TMEM9A	transmembrane protein 9	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-6131	chr1	201177578	201178578	+	14.7	1000	"exon (NM_001164586, exon 12 of 24)"	"exon (NM_001164586, exon 12 of 24)"	18125	NM_001164586	91156	Hs.519024	NM_178275	ENSG00000163395	IGFN1	EEF1A2BP1	immunoglobulin-like and fibronectin type III domain containing 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-6132	chr1	201190498	201191498	+	14.7	1000	"intron (NM_001164586, intron 19 of 23)"	MIRb|SINE|MIR	31045	NM_001164586	91156	Hs.519024	NM_178275	ENSG00000163395	IGFN1	EEF1A2BP1	immunoglobulin-like and fibronectin type III domain containing 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr1-6133	chr1	201193711	201195604	+	30.1	1893	"intron (NM_001164586, intron 21 of 23)"	AluY|SINE|Alu	34704	NM_001164586	91156	Hs.519024	NM_178275	ENSG00000163395	IGFN1	EEF1A2BP1	immunoglobulin-like and fibronectin type III domain containing 1	protein-coding	30.08	3.88	7.75257732	2.58E-13
chr1-6137	chr1	201338056	201343647	+	74.9	5591	"intron (NM_001276346, intron 4 of 14)"	L1MC5|LINE|L1	5977	NM_001276346	7139	Hs.533613	NM_000364	ENSG00000118194	TNNT2	CMD1D|CMH2|CMPD2|LVNC6|RCM3|TnTC|cTnT	"troponin T2, cardiac type"	protein-coding	74.89	10.68	7.012172285	3.19E-29
chr1-6142	chr1	201357679	201358679	+	15.4	1000	"intron (NM_005558, intron 2 of 9)"	"intron (NM_005558, intron 2 of 9)"	10490	NM_005558	3898	Hs.519035	NM_005558	ENSG00000159166	LAD1	LadA	ladinin 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-6144	chr1	201373971	201374971	+	14.1	1000	"3' UTR (NM_003281, exon 8 of 8)"	"3' UTR (NM_003281, exon 8 of 8)"	-5802	NM_005558	3898	Hs.519035	NM_005558	ENSG00000159166	LAD1	LadA	ladinin 1	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr1-6145	chr1	201377919	201380243	+	38.4	2324	"intron (NM_003281, intron 7 of 7)"	MER5A|DNA|hAT-Charlie	-10412	NM_005558	3898	Hs.519035	NM_005558	ENSG00000159166	LAD1	LadA	ladinin 1	protein-coding	38.4	6.8	5.647058824	1.26E-13
chr1-6146	chr1	201394389	201396707	+	37.1	2318	Intergenic	Intergenic	-4674	NM_003281	7135	Hs.320890	NM_003281	ENSG00000159173	TNNI1	SSTNI|TNN1	"troponin I1, slow skeletal type"	protein-coding	37.12	6.8	5.458823529	7.17E-13
chr1-6150	chr1	201560006	201561006	+	14.7	1000	Intergenic	Intergenic	-56944	NM_020443	89796	Hs.585374	NM_020443	ENSG00000134369	NAV1	POMFIL3|STEERIN1|UNC53H1	neuron navigator 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr1-6155	chr1	201857784	201858784	+	15.4	1000	"intron (NM_198149, intron 1 of 4)"	"intron (NM_198149, intron 1 of 4)"	479	NM_198149	149345	Hs.632471	NM_198149	ENSG00000198892	SHISA4	C1orf40|TMEM58	shisa family member 4	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr1-6156	chr1	201877082	201880833	+	51.8	3751	"intron (NM_012134, intron 1 of 2)"	MIR|SINE|MIR	21152	NM_198149	149345	Hs.632471	NM_198149	ENSG00000198892	SHISA4	C1orf40|TMEM58	shisa family member 4	protein-coding	51.85	8.74	5.932494279	3.69E-18
chr1-6157	chr1	201899890	201900890	+	15.4	1000	"intron (NM_012134, intron 1 of 2)"	AluSz6|SINE|Alu	15326	NM_012134	25802	Hs.519075	NM_012134	ENSG00000163431	LMOD1	1D|64kD|D1|SM-LMOD|SMLMOD	leiomodin 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-6158	chr1	201912907	201916958	+	64.6	4051	"intron (NM_012134, intron 1 of 2)"	"intron (NM_012134, intron 1 of 2)"	784	NM_012134	25802	Hs.519075	NM_012134	ENSG00000163431	LMOD1	1D|64kD|D1|SM-LMOD|SMLMOD	leiomodin 1	protein-coding	64.65	10.68	6.053370787	1.08E-22
chr1-6164	chr1	202248441	202250026	+	23.7	1585	"intron (NM_021636, intron 5 of 17)"	HAL1b|LINE|L1	61861	NM_014176	29089	Hs.5199	NM_014176	ENSG00000077152	UBE2T	FANCT|HSPC150|PIG50	ubiquitin conjugating enzyme E2 T	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr1-6166	chr1	202261776	202262776	+	14.7	1000	"intron (NM_021636, intron 6 of 17)"	"intron (NM_021636, intron 6 of 17)"	48818	NM_014176	29089	Hs.5199	NM_014176	ENSG00000077152	UBE2T	FANCT|HSPC150|PIG50	ubiquitin conjugating enzyme E2 T	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-6167	chr1	202265329	202266593	+	17.9	1264	"intron (NM_021636, intron 6 of 17)"	L1M5|LINE|L1	45133	NM_014176	29089	Hs.5199	NM_014176	ENSG00000077152	UBE2T	FANCT|HSPC150|PIG50	ubiquitin conjugating enzyme E2 T	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr1-6176	chr1	203020468	203021732	+	19.8	1264	"intron (NM_001304331, intron 14 of 29)"	"intron (NM_001304331, intron 14 of 29)"	25451	NM_001304331	8497	Hs.153648	NM_015053	ENSG00000143847	PPFIA4	-	PTPRF interacting protein alpha 4	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr1-6179	chr1	203062154	203063154	+	14.7	1000	Intergenic	AluJb|SINE|Alu	-7488	NM_002479	4656	Hs.2830	NM_002479	ENSG00000122180	MYOG	MYF4|bHLHc3|myf-4	myogenin	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-6180	chr1	203077800	203078800	+	13.4	1000	Intergenic	L1PA17|LINE|L1	-18536	NM_000674	134	Hs.77867	NM_000674	ENSG00000163485	ADORA1	RDC7	adenosine A1 receptor	protein-coding	13.44	0	13.84477987	1.16E-11
chr1-6181	chr1	203097452	203098452	+	14.7	1000	"5' UTR (NM_000674, exon 3 of 4)"	"5' UTR (NM_000674, exon 3 of 4)"	1116	NM_001048230	134	Hs.77867	NM_000674	ENSG00000163485	ADORA1	RDC7	adenosine A1 receptor	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-6193	chr1	203374786	203375786	+	14.7	1000	Intergenic	Intergenic	-54729	NR_103757	2331	Hs.519168	NM_002023	ENSG00000122176	FMOD	FM|SLRR2E	fibromodulin	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr1-6198	chr1	203502760	203503760	+	15.4	1000	Intergenic	Intergenic	39989	NM_014359	26254	Hs.632468	NM_014359	ENSG00000188770	OPTC	OPT	opticin	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-6203	chr1	204231222	204233716	+	33.9	2494	"intron (NM_014935, intron 6 of 22)"	"intron (NM_014935, intron 6 of 22)"	-49249	NM_198447	127845	Hs.532401	NM_198447	ENSG00000174567	GOLT1A	CGI-141|GOT1|HMFN1187|YMR292W|hGOT1b	golgi transport 1A	protein-coding	33.92	6.8	4.988235294	1.08E-10
chr1-6206	chr1	204294444	204295714	+	17.9	1270	"intron (NM_014935, intron 1 of 22)"	"intron (NM_014935, intron 1 of 22)"	33978	NM_014935	22874	Hs.253146	NM_014935	ENSG00000143850	PLEKHA6	PEPP-3|PEPP3	pleckstrin homology domain containing A6	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr1-6210	chr1	204576608	204577608	+	14.1	1000	Intergenic	L3|LINE|CR1	77373	NM_006338	10446	Hs.26312	NM_006338	ENSG00000170382	LRRN2	FIGLER7|GAC1|LRANK1|LRRN5	leucine rich repeat neuronal 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr1-6214	chr1	204730893	204731893	+	14.7	1000	Intergenic	MLT1F1|LTR|ERVL-MaLR	-66389	NM_015090	23114	Hs.13349	NM_015090	ENSG00000163531	NFASC	NF|NRCAML	neurofascin	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr1-6216	chr1	204816509	204817760	+	20.5	1251	"intron (NM_001160332, intron 1 of 27)"	"intron (NM_001160332, intron 1 of 27)"	19352	NM_001005388	23114	Hs.13349	NM_015090	ENSG00000163531	NFASC	NF|NRCAML	neurofascin	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr1-6217	chr1	204856541	204858286	+	24.3	1745	"intron (NM_001160332, intron 1 of 27)"	LTR54|LTR|ERV1	-55941	NM_001160331	23114	Hs.13349	NM_015090	ENSG00000163531	NFASC	NF|NRCAML	neurofascin	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr1-6219	chr1	204872442	204873796	+	21.8	1354	"intron (NM_001160332, intron 1 of 27)"	MIRb|SINE|MIR	-40235	NM_001160331	23114	Hs.13349	NM_015090	ENSG00000163531	NFASC	NF|NRCAML	neurofascin	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr1-622	chr1	55971533	55972533	+	21.1	1000	Intergenic	MIRb|SINE|MIR	280719	NR_039618	100616272		NR_039618	ENSG00000265822	MIR4422	mir-4422	microRNA 4422	ncRNA	21.12	3.88	5.443298969	1.44E-07
chr1-6224	chr1	204976083	204977083	+	15.4	1000	"intron (NM_001005388, intron 27 of 29)"	G-rich|Low_complexity|Low_complexity	-35482	NM_001346083	6900	Hs.519220	NM_005076	ENSG00000184144	CNTN2	AXT|FAME5|TAG-1|TAX|TAX1	contactin 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-6228	chr1	205187651	205188651	+	14.1	1000	Intergenic	Intergenic	-7424	NM_199462	25778	Hs.6874	NM_015375	ENSG00000133059	DSTYK	CAKUT1|DustyPK|HDCMD38P|RIP5|RIPK5	dual serine/threonine and tyrosine protein kinase	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr1-6232	chr1	205219333	205220333	+	15.4	1000	"intron (NM_001297611, intron 1 of 3)"	"intron (NM_001297611, intron 1 of 3)"	4209	NM_001297611	9911	Hs.6360	NM_014858	ENSG00000133069	TMCC2	HUCEP11	transmembrane and coiled-coil domain family 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-6233	chr1	205244594	205245867	+	17.3	1273	Intergenic	Intergenic	18905	NM_001331034	9911	Hs.6360	NM_014858	ENSG00000133069	TMCC2	HUCEP11	transmembrane and coiled-coil domain family 2	protein-coding	17.28	1.46	11.83561644	2.99E-10
chr1-6235	chr1	205275010	205277149	+	36.5	2139	"intron (NM_030952, intron 4 of 6)"	"intron (NM_030952, intron 4 of 6)"	14840	NM_030952	81788	Hs.497512	NM_030952	ENSG00000163545	NUAK2	SNARK	NUAK family kinase 2	protein-coding	36.48	3.88	9.402061856	5.49E-18
chr1-6239	chr1	205347024	205348631	+	26.2	1607	"intron (NR_038425, intron 1 of 3)"	AluJb|SINE|Alu	5447	NR_038425	284576	Hs.585440	NR_038425	ENSG00000226235	LEMD1-AS1	-	LEMD1 antisense RNA 1	ncRNA	26.24	2.91	9.017182131	6.53E-13
chr1-6244	chr1	205461962	205463227	+	19.2	1265	Intergenic	Intergenic	-11090	NM_212503	5129	Hs.445402	NM_002596	ENSG00000117266	CDK18	PCTAIRE|PCTAIRE3|PCTK3	cyclin dependent kinase 18	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr1-6249	chr1	205648251	205649251	+	15.4	1000	"intron (NM_033102, intron 1 of 4)"	"intron (NM_033102, intron 1 of 4)"	879	NM_033102	85414	Hs.278695	NM_033102	ENSG00000158715	SLC45A3	IPCA-2|IPCA-6|IPCA-8|IPCA6|PCANAP2|PCANAP6|PCANAP8|PRST	solute carrier family 45 member 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-6250	chr1	205745360	205746360	+	15.4	1000	Intergenic	Intergenic	-1250	NM_001135664	8934	Hs.115325	NM_003929	ENSG00000117280	RAB29	RAB7L|RAB7L1	"RAB29, member RAS oncogene family"	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr1-6254	chr1	206715439	206716439	+	15.4	1000	"intron (NM_182664, intron 2 of 4)"	"intron (NM_182664, intron 2 of 4)"	-14553	NM_182665	83593	Hs.497579	NM_031437	ENSG00000266094	RASSF5	Maxp1|NORE1|NORE1A|NORE1B|RAPL|RASSF3	Ras association domain family member 5	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-6255	chr1	206947158	206948158	+	14.7	1000	Intergenic	Intergenic	-1819	NM_000572	3586	Hs.193717	NM_000572	ENSG00000136634	IL10	CSIF|GVHDS|IL-10|IL10A|TGIF	interleukin 10	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr1-6261	chr1	207168631	207169631	+	15.4	1000	Intergenic	AluSx|SINE|Alu	-25161	NM_001122979	83953	Hs.145519	NM_032029	ENSG00000162897	FCAMR	CD351|FCA/MR|FKSG87	Fc fragment of IgA and IgM receptor	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-6268	chr1	207599107	207600107	+	15.4	1000	Intergenic	AluJb|SINE|Alu	-28038	NM_001006658	1380	Hs.445757	NM_001877	ENSG00000117322	CR2	C3DR|CD21|CR|CVID7|SLEB9	complement C3d receptor 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-6270	chr1	207820144	207821144	+	15.4	1000	"intron (NM_175710, intron 1 of 11)"	L2b|LINE|L2	2186	NM_175710	1379	Hs.628568	NM_175710	ENSG00000197721	CR1L	-	complement C3b/C4b receptor 1 like	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr1-6279	chr1	208275568	208276829	+	16	1261	"intron (NM_025179, intron 5 of 31)"	"intron (NM_025179, intron 5 of 31)"	141467	NM_025179	5362	Hs.497626	NM_025179	ENSG00000076356	PLXNA2	OCT|PLXN2	plexin A2	protein-coding	16	2.43	6.58436214	7.90E-07
chr1-6281	chr1	208338320	208339320	+	14.7	1000	"intron (NM_025179, intron 3 of 31)"	MIRc|SINE|MIR	78845	NM_025179	5362	Hs.497626	NM_025179	ENSG00000076356	PLXNA2	OCT|PLXN2	plexin A2	protein-coding	14.72	0	15.16333034	3.99E-13
chr1-6290	chr1	208685246	208686246	+	15.4	1000	Intergenic	MIRc|SINE|MIR	-268081	NM_025179	5362	Hs.497626	NM_025179	ENSG00000076356	PLXNA2	OCT|PLXN2	plexin A2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr1-6292	chr1	209286402	209287402	+	14.7	1000	Intergenic	Intergenic	-211899	NR_135085	105372897	Hs.116154	NR_135085	ENSG00000227940	LINC01696	-	long intergenic non-protein coding RNA 1696	ncRNA	14.72	0.49	30.04081633	3.99E-13
chr1-6293	chr1	209991301	209992301	+	14.7	1000	Intergenic	AluSx1|SINE|Alu	-9511	NM_014388	27042	Hs.194754	NM_014388	ENSG00000117597	DIEXF	C1orf107|DEF|DJ434O14.5|UTP25	digestive organ expansion factor homolog (zebrafish)	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-6294	chr1	210112994	210114296	+	21.1	1302	"intron (NM_001146264, intron 1 of 8)"	"intron (NM_001146264, intron 1 of 8)"	2126	NR_027459	255928	Hs.658866	NM_153262	ENSG00000143469	SYT14	SCAR11|sytXIV	synaptotagmin 14	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr1-6304	chr1	211655835	211656835	+	14.7	1000	"intron (NM_183059, intron 1 of 2)"	"intron (NM_183059, intron 1 of 2)"	9924	NM_001164688	343035	Hs.632495	NM_183059	ENSG00000198570	RD3	C1orf36|LCA12	retinal degeneration 3	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-6306	chr1	212686340	212687340	+	14.1	1000	Intergenic	Intergenic	-32196	NR_125985	101929565		NR_125985	ENSG00000228067	LINC01740	-	long intergenic non-protein coding RNA 1740	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr1-6310	chr1	213665703	213666703	+	15.4	1000	Intergenic	Intergenic	-431889	NR_046189	100861504	Hs.742586	NR_046189		LINC00538	PROX1UT|Yiya	long intergenic non-protein coding RNA 538	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr1-6316	chr1	214430881	214431881	+	14.1	1000	Intergenic	Intergenic	-23184	NM_020197	56950	Hs.66170	NM_020197	ENSG00000143499	SMYD2	HSKM-B|KMT3C|ZMYND14	SET and MYND domain containing 2	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr1-6317	chr1	214553275	214554275	+	15.4	1000	"intron (NM_005401, intron 13 of 18)"	"intron (NM_005401, intron 13 of 18)"	99210	NM_020197	56950	Hs.66170	NM_020197	ENSG00000143499	SMYD2	HSKM-B|KMT3C|ZMYND14	SET and MYND domain containing 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-6318	chr1	214722619	214724456	+	27.5	1837	"intron (NM_005401, intron 1 of 18)"	L2c|LINE|L2	1487	NM_005401	5784	Hs.193557	NM_005401	ENSG00000152104	PTPN14	PEZ|PTP36	"protein tyrosine phosphatase, non-receptor type 14"	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr1-6319	chr1	214726281	214727281	+	14.1	1000	Intergenic	MIR|SINE|MIR	-1757	NM_005401	5784	Hs.193557	NM_005401	ENSG00000152104	PTPN14	PEZ|PTP36	"protein tyrosine phosphatase, non-receptor type 14"	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr1-6320	chr1	217568811	217569811	+	15.4	1000	Intergenic	Intergenic	235133	NM_018040	55105	Hs.362343	NM_018040	ENSG00000092978	GPATCH2	CT110|GPATC2|PPP1R30	G-patch domain containing 2	protein-coding	15.36	0	15.82260557	1.26E-14
chr1-6321	chr1	218924697	218925697	+	14.7	1000	"intron (NR_031644, intron 4 of 6)"	HERVE_a-int|LTR|ERV1	309229	NR_125715	103611157	Hs.133379	NR_125715	ENSG00000281453	TGFB2-OT1	-	TGFB2 overlapping transcript 1	ncRNA	14.72	0.49	30.04081633	3.99E-13
chr1-6324	chr1	221657449	221658963	+	22.4	1514	Intergenic	Intergenic	-148568	NR_024236	400804	Hs.722626	NR_024236	ENSG00000234754	C1orf140	-	uncharacterized LOC400804	ncRNA	22.4	3.88	5.773195876	2.53E-08
chr1-6330	chr1	222228304	222229304	+	14.7	1000	Intergenic	MER4A1|LTR|ERV1	-214796	NR_125989	101929771	Hs.557001	NR_125989	ENSG00000227925	LINC01655	-	long intergenic non-protein coding RNA 1655	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr1-6331	chr1	222986396	222987396	+	14.7	1000	Intergenic	Intergenic	-1535	NM_032890	84976	Hs.528817	NM_032890	ENSG00000154309	DISP1	DISPA	dispatched RND transporter family member 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-6333	chr1	223377440	223379032	+	25	1592	Intergenic	Intergenic	-61612	NM_003268	7100	Hs.604542	NM_003268	ENSG00000187554	TLR5	MELIOS|SLE1|SLEB1|TIL3	toll like receptor 5	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr1-6337	chr1	223900363	223902287	+	30.7	1924	"intron (NM_001748, intron 1 of 20)"	"intron (NM_001748, intron 1 of 20)"	1206	NM_001748	824	Hs.350899	NM_001748	ENSG00000162909	CAPN2	CANP2|CANPL2|CANPml|mCANP	calpain 2	protein-coding	30.72	3.88	7.917525773	3.25E-14
chr1-6338	chr1	223940507	223941507	+	14.7	1000	"intron (NM_001748, intron 9 of 20)"	"intron (NM_001748, intron 9 of 20)"	40888	NM_001748	824	Hs.350899	NM_001748	ENSG00000162909	CAPN2	CANP2|CANPL2|CANPml|mCANP	calpain 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-6339	chr1	224260419	224261419	+	15.4	1000	Intergenic	HAL1|LINE|L1	-40870	NR_049764	23219	Hs.64691	NM_015176	ENSG00000143756	FBXO28	CENP-30|Fbx28	F-box protein 28	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-6342	chr1	225065129	225066129	+	15.4	1000	Intergenic	L1PB2|LINE|L1	-51727	NM_001145154	127602	Hs.133977	NM_001373	ENSG00000185842	DNAH14	C1orf67|Dnahc14|HL-18|HL18	dynein axonemal heavy chain 14	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-6347	chr1	225884439	225888211	+	46.7	3772	Intergenic	MIR|SINE|MIR	-45480	NM_018212	55740	Hs.497893	NM_018212	ENSG00000154380	ENAH	ENA|MENA|NDPP1	enabled homolog (Drosophila)	protein-coding	46.73	6.31	7.40570523	1.95E-19
chr1-6348	chr1	226070302	226071302	+	14.7	1000	promoter-TSS (NM_014698)	promoter-TSS (NM_014698)	-382	NM_014698	9725	Hs.119387	NM_014698	ENSG00000196187	TMEM63A	KIAA0792	transmembrane protein 63A	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-6353	chr1	226676137	226677399	+	14.7	1262	Intergenic	MER70B|LTR|ERVL	-59733	NM_001003665	375057	Hs.116827	NM_001003665	ENSG00000203685	STUM	C1orf95	"stum, mechanosensory transduction mediator homolog"	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr1-6356	chr1	226720488	226721488	+	15.4	1000	Intergenic	Intergenic	-15513	NM_001003665	375057	Hs.116827	NM_001003665	ENSG00000203685	STUM	C1orf95	"stum, mechanosensory transduction mediator homolog"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-636	chr1	111292148	111293148	+	21.8	1000	Intergenic	Intergenic	-74993	NM_002232	3738	Hs.169948	NM_002232	ENSG00000177272	KCNA3	HGK5|HLK3|HPCN3|HUKIII|KV1.3|MK3|PCN3	potassium voltage-gated channel subfamily A member 3	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr1-6360	chr1	226774108	226775108	+	14.7	1000	"intron (NM_001003665, intron 1 of 3)"	"intron (NM_001003665, intron 1 of 3)"	38107	NM_001003665	375057	Hs.116827	NM_001003665	ENSG00000203685	STUM	C1orf95	"stum, mechanosensory transduction mediator homolog"	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr1-6364	chr1	226793593	226794948	+	19.8	1355	"3' UTR (NM_001003665, exon 4 of 4)"	"3' UTR (NM_001003665, exon 4 of 4)"	57769	NM_001003665	375057	Hs.116827	NM_001003665	ENSG00000203685	STUM	C1orf95	"stum, mechanosensory transduction mediator homolog"	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr1-6367	chr1	228127198	228131189	+	55	3991	TTS (NR_049806)	TTS (NR_049806)	191	NR_049806	100847072		NR_049806	ENSG00000264483	MIR5008	-	microRNA 5008	ncRNA	55.05	13.59	4.050772627	6.99E-14
chr1-6369	chr1	228133046	228137199	+	73	4153	"intron (NM_003395, intron 1 of 3)"	CpG	554	NM_003395	7483	Hs.149504	NM_003395	ENSG00000143816	WNT9A	WNT14	Wnt family member 9A	protein-coding	72.97	8.74	8.348970252	1.06E-32
chr1-6371	chr1	228663275	228664275	+	15.4	1000	Intergenic	Intergenic	-11293	NM_001010858	149603	Hs.356377	NM_001010858	ENSG00000168159	RNF187	RACO-1|RACO1	ring finger protein 187	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-6372	chr1	228704549	228705549	+	13.4	1000	Intergenic	Intergenic	-5060	NM_001287262	100129094	Hs.730208	NM_001287262		BTNL10	BTN4|BUTR1	butyrophilin like 10	protein-coding	13.44	2.43	5.530864198	2.99E-05
chr1-6373	chr1	228914341	228915691	+	21.1	1350	Intergenic	Intergenic	44192	NM_021205	58480	Hs.647774	NM_021205	ENSG00000116574	RHOU	ARHU|CDC42L1|G28K|WRCH1|hG28K	ras homolog family member U	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr1-6375	chr1	229029883	229030883	+	15.4	1000	Intergenic	Intergenic	159559	NM_021205	58480	Hs.647774	NM_021205	ENSG00000116574	RHOU	ARHU|CDC42L1|G28K|WRCH1|hG28K	ras homolog family member U	protein-coding	15.36	0	15.82260557	1.26E-14
chr1-6377	chr1	229569961	229570961	+	14.1	1000	promoter-TSS (NM_001100)	promoter-TSS (NM_001100)	-618	NM_001100	58	Hs.1288	NM_001100	ENSG00000143632	ACTA1	ACTA|ASMA|CFTD|CFTD1|CFTDM|MPFD|NEM1|NEM2|NEM3|SHPM	"actin, alpha 1, skeletal muscle"	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr1-6378	chr1	230695397	230696397	+	14.7	1000	Intergenic	L1ME3|LINE|L1	-82305	NM_007357	22796	Hs.211800	NM_007357	ENSG00000135775	COG2	LDLC	component of oligomeric golgi complex 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-6379	chr1	230847584	230848584	+	14.7	1000	"intron (NM_000029, intron 1 of 4)"	"intron (NM_000029, intron 1 of 4)"	2252	NM_000029	183	Hs.19383	NM_000029	ENSG00000135744	AGT	ANHU|SERPINA8	angiotensinogen	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-6380	chr1	230905792	230906792	+	14.1	1000	"intron (NM_001319676, intron 4 of 17)"	"intron (NM_001319676, intron 4 of 17)"	23162	NM_016452	10753	Hs.498021	NM_006615	ENSG00000135773	CAPN9	GC36|nCL-4	calpain 9	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr1-6385	chr1	233526720	233528114	+	21.8	1394	Intergenic	L1M4b|LINE|L1	63903	NM_032435	84451	Hs.547779	NM_032435	ENSG00000143674	MAP3K21	KIAA1804|MLK4|dJ862P8.3	mitogen-activated protein kinase kinase kinase 21	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr1-6386	chr1	233603527	233604527	+	14.1	1000	Intergenic	(TAAA)n|Simple_repeat|Simple_repeat	140513	NM_032435	84451	Hs.547779	NM_032435	ENSG00000143674	MAP3K21	KIAA1804|MLK4|dJ862P8.3	mitogen-activated protein kinase kinase kinase 21	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr1-639	chr1	113335915	113337498	+	32	1583	Intergenic	MER70B|LTR|ERVL	56559	NR_103746	100996702	Hs.632431	NR_103746	ENSG00000215866	LINC01356	-	long intergenic non-protein coding RNA 1356	ncRNA	32	2.91	10.99656357	6.10E-18
chr1-6399	chr1	234883785	234885563	+	26.2	1778	Intergenic	L1ME1|LINE|L1	24885	NR_038856	100506810	Hs.586634	NR_038856	ENSG00000227630	LINC01132	-	long intergenic non-protein coding RNA 1132	ncRNA	26.24	4.37	6.004576659	7.40E-10
chr1-6401	chr1	235014672	235015672	+	14.1	1000	Intergenic	L1PB4|LINE|L1	84574	NR_125945	101927851	Hs.520684	NR_125945	ENSG00000238005	LOC101927851	-	uncharacterized LOC101927851	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr1-6402	chr1	235029543	235030543	+	13.4	1000	Intergenic	Intergenic	69703	NR_125945	101927851	Hs.520684	NR_125945	ENSG00000238005	LOC101927851	-	uncharacterized LOC101927851	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr1-6405	chr1	236243013	236244013	+	14.7	1000	Intergenic	AluJb|SINE|Alu	-15032	NM_002508	4811	Hs.356624	NM_002508	ENSG00000116962	NID1	NID	nidogen 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-6407	chr1	236626854	236627854	+	14.7	1000	"intron (NM_145861, intron 4 of 5)"	L2c|LINE|L2	-54160	NM_201545	3964	Hs.4082	NM_006499	ENSG00000116977	LGALS8	Gal-8|PCTA-1|PCTA1|Po66-CBP	galectin 8	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr1-6408	chr1	236770503	236771503	+	15.4	1000	Intergenic	Zaphod|DNA|hAT-Tip100	-3162	NM_018072	55127	Hs.708114	NM_018072	ENSG00000119285	HEATR1	BAP28|UTP10	HEAT repeat containing 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr1-6411	chr1	242864761	242865761	+	14.1	1000	Intergenic	AluSg4|SINE|Alu	-177263	NM_001320272	200150	Hs.672452	NM_152666	ENSG00000180287	PLD5	PLDC	phospholipase D family member 5	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr1-6415	chr1	245546536	245547536	+	15.4	1000	"intron (NM_018012, intron 3 of 14)"	"intron (NM_018012, intron 3 of 14)"	228749	NM_018012	55083	Hs.143134	NM_018012	ENSG00000162849	KIF26B	-	kinesin family member 26B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr1-6422	chr1	247546431	247547431	+	15.4	1000	Intergenic	HUERS-P1-int|LTR|ERV1	-32527	NM_001127461	114548	Hs.159483	NM_004895	ENSG00000162711	NLRP3	AGTAVPRL|AII|AVP|C1orf7|CIAS1|CLR1.1|FCAS|FCAS1|FCU|MWS|NALP3|PYPAF1	NLR family pyrin domain containing 3	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr1-652	chr1	146555579	146559754	+	65.9	4175	Intergenic	LTR8|LTR|ERV1	-1363	NR_121645	101447996		NR_121645		RNVU1-8	RNU1-145|vU1.8	"RNA, variant U1 small nuclear 8"	snRNA	65.93	10.68	6.173220974	1.76E-23
chr1-659	chr1	156660369	156662235	+	39	1866	Intergenic	Intergenic	-14113	NM_006617	10763	Hs.527971	NM_006617	ENSG00000132688	NES	Nbla00170	nestin	protein-coding	39.04	4.85	8.049484536	2.24E-17
chr1-661	chr1	197879904	197889379	+	176	9475	"intron (NM_001014434, intron 1 of 5)"	"intron (NM_001014434, intron 1 of 5)"	-1876	NM_020204	56956	Hs.442578	NM_020204	ENSG00000143355	LHX9	-	LIM homeobox 9	protein-coding	176.02	38.83	4.533092969	1.80E-45
chr1-663	chr1	201250968	201254364	+	53.8	3396	promoter-TSS (NM_000299)	promoter-TSS (NM_000299)	86	NM_000299	5317	Hs.497350	NM_000299	ENSG00000081277	PKP1	B6P	plakophilin 1	protein-coding	53.77	10.68	5.034644195	1.03E-16
chr1-670	chr1	203434215	203435215	+	21.8	1000	Intergenic	Intergenic	-10168	NM_002725	5549	Hs.632481	NM_002725	ENSG00000188783	PRELP	MST161|MSTP161|SLRR2A	proline and arginine rich end leucine rich repeat protein	protein-coding	21.76	2.43	8.95473251	2.49E-11
chr1-676	chr1	207081933	207083565	+	37.8	1632	"intron (NM_005449, intron 7 of 7)"	CpG	11961	NM_006850	11009	Hs.58831	NM_006850	ENSG00000162892	IL24	C49A|FISP|IL10B|MDA7|MOB5|ST16	interleukin 24	protein-coding	37.76	3.88	9.731958763	5.72E-19
chr1-678	chr1	208131195	208134200	+	56.3	3005	Intergenic	CpG	-48014	NM_001773	947	Hs.374990	NM_001773	ENSG00000174059	CD34	-	CD34 molecule	protein-coding	56.33	9.71	5.801235839	1.19E-19
chr1-685	chr1	856833	868879	+	234.3	12046	"intron (NM_152486, intron 2 of 13)"	"intron (NM_152486, intron 2 of 13)"	1735	NM_152486	148398	Hs.335293	NM_152486	ENSG00000187634	SAMD11	MRS	sterile alpha motif domain containing 11	protein-coding	234.27	26.21	8.93819153	1.07E-105
chr1-696	chr1	2720179	2722043	+	36.5	1864	Intergenic	Intergenic	-14881	NM_001242672	100287898	Hs.632363	NM_001242672	ENSG00000215912	TTC34	-	tetratricopeptide repeat domain 34	protein-coding	36.48	0.97	37.60824742	6.64E-34
chr1-697	chr1	2794944	2797126	+	36.5	2182	Intergenic	Intergenic	-89805	NM_001242672	100287898	Hs.632363	NM_001242672	ENSG00000215912	TTC34	-	tetratricopeptide repeat domain 34	protein-coding	36.48	5.34	6.831460674	1.37E-14
chr1-704	chr1	7569047	7570583	+	26.9	1536	"intron (NM_015215, intron 6 of 22)"	"intron (NM_015215, intron 6 of 22)"	-261514	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr1-709	chr1	16083522	16086561	+	57	3039	promoter-TSS (NM_017556)	promoter-TSS (NM_017556)	-214	NM_017556	54751	Hs.530101	NM_017556	ENSG00000162458	FBLIM1	CAL|FBLP-1|FBLP1	filamin binding LIM protein 1	protein-coding	56.97	5.82	9.788659794	3.96E-28
chr1-711	chr1	16340895	16343235	+	37.1	2340	"3' UTR (NM_014424, exon 3 of 3)"	"3' UTR (NM_014424, exon 3 of 3)"	3220	NM_014424	27129	Hs.502612	NM_014424	ENSG00000173641	HSPB7	cvHSP	heat shock protein family B (small) member 7	protein-coding	37.12	6.8	5.458823529	7.17E-13
chr1-713	chr1	16849140	16851862	+	44.8	2722	Intergenic	LTR49|LTR|ERV1	11646	NR_135764	100132147	Hs.645945	NR_135764	ENSG00000233421	LINC01783	-	long intergenic non-protein coding RNA 1783	ncRNA	44.81	8.25	5.431515152	3.94E-15
chr1-718	chr1	17539704	17540958	+	25	1254	"intron (NM_013358, intron 1 of 15)"	"intron (NM_013358, intron 1 of 15)"	8710	NM_013358	29943	Hs.412941	NM_013358	ENSG00000142623	PADI1	HPAD10|PAD1|PDI|PDI1	peptidyl arginine deiminase 1	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr1-719	chr1	17941669	17942927	+	21.1	1258	"intron (NM_018125, intron 8 of 28)"	MIRc|SINE|MIR	-2510	NM_001328124	55160	Hs.443460	NM_018125	ENSG00000074964	ARHGEF10L	GrinchGEF	Rho guanine nucleotide exchange factor 10 like	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr1-721	chr1	18743394	18744658	+	22.4	1264	Intergenic	MER34C_|LTR|ERV1	-63398	NM_152375	127707	Hs.406913	NM_152375	ENSG00000179023	KLHDC7A	-	kelch domain containing 7A	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr1-722	chr1	18955049	18972776	+	342.4	17727	"intron (NM_002584, intron 4 of 7)"	"intron (NM_002584, intron 4 of 7)"	6412	NM_002584	5081	Hs.113253	NM_002584	ENSG00000009709	PAX7	HUP1|PAX7B|RMS2	paired box 7	protein-coding	342.44	41.26	8.299563742	1.68E-145
chr1-723	chr1	19037958	19040732	+	46.7	2774	"intron (NM_002584, intron 7 of 7)"	AluSz|SINE|Alu	81845	NM_002584	5081	Hs.113253	NM_002584	ENSG00000009709	PAX7	HUP1|PAX7B|RMS2	paired box 7	protein-coding	46.73	10.19	4.585868499	3.26E-13
chr1-724	chr1	19995709	19997188	+	26.2	1479	"intron (NM_000871, intron 1 of 2)"	"intron (NM_000871, intron 1 of 2)"	4668	NM_000871	3362	Hs.22180	NM_000871	ENSG00000158748	HTR6	5-HT6|5-HT6R	5-hydroxytryptamine receptor 6	protein-coding	26.24	3.88	6.762886598	1.00E-10
chr1-725	chr1	20640197	20641197	+	20.5	1000	"intron (NM_001039500, intron 3 of 21)"	MIRb|SINE|MIR	23285	NM_001039500	127731	Hs.205178	NM_144623	ENSG00000158816	VWA5B1	-	von Willebrand factor A domain containing 5B1	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr1-737	chr1	30381612	30382612	+	19.8	1000	Intergenic	Arthur1|DNA|hAT-Tip100	128347	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr1-740	chr1	36797758	36799069	+	19.2	1311	Intergenic	HERVFH21-int|LTR|ERV1	-8658	NM_018166	55194	Hs.87016	NM_018166	ENSG00000142694	EVA1B	C1orf78|FAM176B	eva-1 homolog B	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr1-743	chr1	38603653	38605776	+	38.4	2123	Intergenic	Intergenic	49811	NR_037432	100500801		NR_037432	ENSG00000265596	MIR3659	mir-3659	microRNA 3659	ncRNA	38.4	8.74	4.393592677	5.52E-11
chr1-771	chr1	114593462	114595089	+	31.4	1627	Intergenic	Intergenic	72262	NM_001286353	56944	Hs.9315	NM_020190	ENSG00000116774	OLFML3	HNOEL-iso|OLF44	olfactomedin like 3	protein-coding	31.36	6.8	4.611764706	2.53E-09
chr1-805	chr1	234350892	234351892	+	19.8	1000	"intron (NM_001300845, intron 1 of 6)"	"intron (NM_001300845, intron 1 of 6)"	1435	NM_001300845	148641	Hs.158748	NM_173508	ENSG00000183780	SLC35F3	-	solute carrier family 35 member F3	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr1-813	chr1	1976683	1977962	+	22.4	1279	Intergenic	Intergenic	4187	NR_135509	105378591	Hs.371879	NR_135509	ENSG00000226969	LOC105378591	-	uncharacterized LOC105378591	ncRNA	22.4	2.91	7.697594502	3.87E-10
chr1-815	chr1	2082779	2084076	+	22.4	1297	"intron (NM_001033581, intron 6 of 14)"	AluJb|SINE|Alu	42787	NM_001282671	199990	Hs.107101	NM_182533	ENSG00000162585	FAAP20	C1orf86|FP7162	Fanconi anemia core complex associated protein 20	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr1-817	chr1	2272687	2273687	+	22.4	1000	"intron (NM_024848, intron 10 of 13)"	"intron (NM_024848, intron 10 of 13)"	10913	NR_024489	100129534	Hs.655313	NM_001127577	ENSG00000269896	LOC100129534	-	small nuclear ribonucleoprotein polypeptide N pseudogene	pseudo	22.4	3.88	5.773195876	2.53E-08
chr1-826	chr1	9441896	9443241	+	21.8	1345	Intergenic	MIRb|SINE|MIR	46407	NR_104623	100506022	Hs.131775	NR_104622		LOC100506022	-	uncharacterized LOC100506022	ncRNA	21.76	2.91	7.47766323	3.87E-10
chr1-832	chr1	15712272	15713691	+	29.4	1419	"intron (NM_052929, intron 30 of 30)"	"intron (NM_052929, intron 30 of 30)"	-23410	NM_024329	79180	Hs.465374	NM_024329	ENSG00000142634	EFHD2	SWS1	EF-hand domain family member D2	protein-coding	29.44	6.31	4.665610143	3.01E-09
chr1-834	chr1	16403098	16404098	+	19.2	1000	Intergenic	Intergenic	-3471	NM_182623	348487	Hs.126825	NM_182623	ENSG00000185519	FAM131C	C1orf117	family with sequence similarity 131 member C	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr1-836	chr1	17201171	17204126	+	43.5	2955	Intergenic	AluSz|SINE|Alu	5208	NR_135765	440570	Hs.308060	NM_001013708		LOC440570	-	uncharacterized LOC440570	ncRNA	43.53	7.28	5.979395604	6.36E-16
chr1-841	chr1	20915926	20917227	+	21.8	1301	"intron (NM_001785, intron 1 of 3)"	"intron (NM_001785, intron 1 of 3)"	1132	NM_001785	978	Hs.466910	NM_001785	ENSG00000158825	CDA	CDD	cytidine deaminase	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr1-844	chr1	23135505	23136921	+	23.7	1416	"intron (NM_017449, intron 3 of 15)"	"intron (NM_017449, intron 3 of 15)"	53506	NR_036214	100422914		NR_036214	ENSG00000264014	MIR4253	-	microRNA 4253	ncRNA	23.68	1.94	12.20618557	6.71E-14
chr1-845	chr1	23179753	23180753	+	19.8	1000	"intron (NM_017449, intron 3 of 15)"	L2c|LINE|L2	9466	NR_036214	100422914		NR_036214	ENSG00000264014	MIR4253	-	microRNA 4253	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr1-850	chr1	29140344	29141607	+	23.7	1263	"intron (NM_000911, intron 1 of 2)"	"intron (NM_000911, intron 1 of 2)"	2321	NM_000911	4985	Hs.372	NM_000911	ENSG00000116329	OPRD1	OPRD	opioid receptor delta 1	protein-coding	23.68	4.37	5.418764302	2.46E-08
chr1-851	chr1	30274166	30275844	+	28.8	1678	Intergenic	Intergenic	235454	NR_110790	101929406	Hs.639413	NR_110790	ENSG00000233399	LINC01648	-	long intergenic non-protein coding RNA 1648	ncRNA	28.8	4.37	6.590389016	1.84E-11
chr1-853	chr1	31071146	31073423	+	38.4	2277	Intergenic	Intergenic	-119335	NR_034182	100129196	Hs.659751	NR_034182	ENSG00000186056	MATN1-AS1	-	MATN1 antisense RNA 1	ncRNA	38.4	7.77	4.942084942	3.34E-12
chr1-857	chr1	32169499	32170949	+	27.5	1450	promoter-TSS (NM_001856)	promoter-TSS (NM_001856)	-456	NM_001856	1307	Hs.368921	NM_001856	ENSG00000084636	COL16A1	447AA|FP1572	collagen type XVI alpha 1 chain	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr1-871	chr1	44909207	44910207	+	21.8	1000	"intron (NM_001319957, intron 1 of 13)"	AluSx|SINE|Alu	20211	NM_001319957	55182	Hs.456557	NM_018150	ENSG00000187147	RNF220	C1orf164	ring finger protein 220	protein-coding	21.76	5.34	4.074906367	1.97E-06
chr1-882	chr1	52357704	52358704	+	19.8	1000	Intergenic	AluSc8|SINE|Alu	-13595	NM_001101662	4898	Hs.584782	NM_002525	ENSG00000078618	NRDC	NRD1|hNRD1|hNRD2	nardilysin convertase	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr1-884	chr1	54200907	54206575	+	99.2	5668	Intergenic	CpG	-3864	NM_147193	148979	Hs.306691	NM_147193	ENSG00000174332	GLIS1	-	GLIS family zinc finger 1	protein-coding	99.21	17.47	5.678878077	2.50E-32
chr1-888	chr1	87637971	87641544	+	59.5	3573	Intergenic	L2a|LINE|L2	-38595	NM_001290053	101927844	Hs.694591	NM_001290053		LOC101927844	-	uncharacterized LOC101927844	protein-coding	59.53	11.16	5.334229391	6.70E-19
chr1-897	chr1	111140663	111142217	+	26.9	1554	"intron (NM_001204269, intron 4 of 4)"	"intron (NM_001204269, intron 4 of 4)"	7535	NM_004974	3737	Hs.248139	NM_004974	ENSG00000177301	KCNA2	EIEE32|HBK5|HK4|HUKIV|KV1.2|MK2|NGK1|RBK2	potassium voltage-gated channel subfamily A member 2	protein-coding	26.88	4.37	6.151029748	1.19E-10
chr1-911	chr1	151810466	151812106	+	26.9	1640	"exon (NM_001136003, exon 2 of 2)"	"exon (NM_001136003, exon 2 of 2)"	341	NR_024237	100132111	Hs.697059	NR_024237		LOC100132111	-	uncharacterized LOC100132111	ncRNA	26.88	0	27.68955974	1.92E-29
chr1-913	chr1	153388970	153390781	+	35.2	1811	"intron (NM_176823, intron 1 of 2)"	"intron (NM_176823, intron 1 of 2)"	875	NM_176823	338324	Hs.442337	NM_176823	ENSG00000184330	S100A7A	NICE-2|S100A15|S100A7L1|S100A7f	S100 calcium binding protein A7A	protein-coding	35.2	7.28	4.835164835	9.40E-11
chr1-916	chr1	154840629	154842224	+	31.4	1595	"intron (NM_002249, intron 1 of 7)"	CT-rich|Low_complexity|Low_complexity	1328	NM_001204087	3782	Hs.490765	NM_002249	ENSG00000143603	KCNN3	KCa2.3|SK3|SKCA3|hSK3	potassium calcium-activated channel subfamily N member 3	protein-coding	31.36	2.43	12.90534979	1.22E-18
chr1-927	chr1	156862510	156864045	+	28.2	1535	promoter-TSS (NM_001080471)	promoter-TSS (NM_001080471)	-246	NM_001080471	375033	Hs.142003	NM_207369	ENSG00000187800	PEAR1	JEDI|MEGF12	platelet endothelial aggregation receptor 1	protein-coding	28.16	1.94	14.51546392	1.99E-18
chr1-928	chr1	157113777	157115289	+	30.1	1512	Intergenic	Intergenic	-6150	NM_001145312	2117	Hs.105636	NM_005240	ENSG00000117036	ETV3	METS|PE-1|PE1|bA110J1.4	ETS variant 3	protein-coding	30.08	6.8	4.423529412	1.16E-08
chr1-935	chr1	185531437	185532437	+	20.5	1000	"intron (NR_110793, intron 3 of 3)"	"intron (NR_110793, intron 3 of 3)"	65683	NR_110793	101929093	Hs.535227	NR_110793	ENSG00000228309	LINC01350	GS1-204I12.1	long intergenic non-protein coding RNA 1350	ncRNA	20.48	4.85	4.222680412	2.52E-06
chr1-945	chr1	201539931	201541184	+	25.6	1253	Intergenic	L2a|LINE|L2	51525	NR_026667	376693	Hs.605989	NR_026667		RPS10P7	RPS10_2_147	ribosomal protein S10 pseudogene 7	pseudo	25.6	4.85	5.278350515	4.26E-09
chr1-946	chr1	202027830	202028830	+	21.1	1000	Intergenic	AluSz|SINE|Alu	48640	NM_001114309	1999	Hs.603657	NM_004433	ENSG00000163435	ELF3	EPR-1|ERT|ESE-1|ESX	E74 like ETS transcription factor 3	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr1-949	chr1	203191963	203194955	+	48.6	2992	"intron (NM_001256125, intron 3 of 9)"	"intron (NM_001256125, intron 3 of 9)"	5401	NM_001270509	1118	Hs.201688	NM_003465	ENSG00000133063	CHIT1	CHI3|CHIT|CHITD	chitinase 1	protein-coding	48.65	9.71	5.010298661	3.28E-15
chr1-952	chr1	205605614	205606873	+	19.2	1259	Intergenic	Intergenic	-4243	NM_021795	2005	Hs.497520	NM_001973	ENSG00000158711	ELK4	SAP1	"ELK4, ETS transcription factor"	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr1-953	chr1	206207309	206208309	+	20.5	1000	Intergenic	AluSz|SINE|Alu	-16474	NM_000707	553	Hs.1372	NM_000707	ENSG00000198049	AVPR1B	AVPR3	arginine vasopressin receptor 1B	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr1-960	chr1	223509790	223511064	+	26.2	1274	"intron (NM_001037175, intron 2 of 5)"	"intron (NM_001037175, intron 2 of 5)"	27117	NM_017982	55061	Hs.497841	NM_017982	ENSG00000143502	SUSD4	PRO222	sushi domain containing 4	protein-coding	26.24	2.91	9.017182131	6.53E-13
chr1-965	chr1	1052802	1056558	+	64.6	3756	Intergenic	Intergenic	-2944	NM_001330306	54991	Hs.235095	NM_017891	ENSG00000131591	C1orf159	-	chromosome 1 open reading frame 159	protein-coding	64.65	11.65	5.549356223	3.99E-21
chr1-971	chr1	3130238	3131504	+	21.8	1266	"intron (NM_199454, intron 2 of 16)"	"intron (NM_199454, intron 2 of 16)"	86332	NR_036215	100422968		NR_036215	ENSG00000283572	MIR4251	-	microRNA 4251	ncRNA	21.76	0.97	22.43298969	1.19E-17
chr1-974	chr1	4666029	4667356	+	21.1	1327	Intergenic	MLT1B|LTR|ERVL-MaLR	-48413	NM_001042478	55966	Hs.12473	NM_018836	ENSG00000196581	AJAP1	MOT8|SHREW-1|SHREW1	adherens junctions associated protein 1	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr1-977	chr1	7779082	7780406	+	22.4	1324	"intron (NM_015215, intron 11 of 22)"	"intron (NM_015215, intron 11 of 22)"	-51585	NM_004781	9341	Hs.66708	NM_004781	ENSG00000049245	VAMP3	CEB	vesicle associated membrane protein 3	protein-coding	22.4	0.97	23.09278351	1.19E-17
chr1-981	chr1	11518248	11520637	+	38.4	2389	Intergenic	Intergenic	-19853	NM_020780	57540	Hs.202355	NM_020780	ENSG00000204624	DISP3	PTCHD2	dispatched RND transporter family member 3	protein-coding	38.4	5.34	7.191011236	2.72E-16
chr1-987	chr1	12833318	12834318	+	20.5	1000	Intergenic	Intergenic	-1173	NM_001080830	390999	Hs.156406	NM_001080830	ENSG00000116726	PRAMEF12	-	PRAME family member 12	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr1-988	chr1	14021051	14022302	+	21.1	1251	Intergenic	MIRb|SINE|MIR	-5059	NM_001135610	7799	Hs.371823	NM_012231	ENSG00000116731	PRDM2	HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2	PR/SET domain 2	protein-coding	21.12	0	21.75608266	5.97E-21
chr1-993	chr1	17030669	17032679	+	38.4	2010	"intron (NR_026567, intron 4 of 10)"	"intron (NR_026567, intron 4 of 10)"	14978	NR_026567	284729	Hs.548239	NR_026567	ENSG00000268869	ESPNP	dJ1182A14.1	espin pseudogene	pseudo	38.4	7.77	4.942084942	3.34E-12
chr1-995	chr1	17432464	17434747	+	39	2283	"intron (NM_007365, intron 1 of 15)"	"intron (NM_007365, intron 1 of 15)"	12343	NM_007365	11240	Hs.33455	NM_007365	ENSG00000117115	PADI2	PAD-H19|PAD2|PDI2	peptidyl arginine deiminase 2	protein-coding	39.04	4.85	8.049484536	2.24E-17
chr1-997	chr1	17571708	17577253	+	89	5545	Intergenic	AluY|SINE|Alu	-1113	NM_016233	51702	Hs.149195	NM_016233	ENSG00000142619	PADI3	PAD3|PDI3	peptidyl arginine deiminase 3	protein-coding	88.97	11.65	7.636909871	1.12E-36
chr10-1003	chr10	94938932	94940580	+	31.4	1648	Intergenic	AluSx|SINE|Alu	106109	NM_000783	1592	Hs.150595	NM_000783	ENSG00000095596	CYP26A1	CP26|CYP26|P450RAI|P450RAI1	cytochrome P450 family 26 subfamily A member 1	protein-coding	31.36	5.82	5.388316151	1.29E-10
chr10-1006	chr10	97317511	97318511	+	16	1000	"intron (NM_015385, intron 1 of 24)"	AluJo|SINE|Alu	3166	NM_015385	10580	Hs.38621	NM_006434	ENSG00000095637	SORBS1	CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1	sorbin and SH3 domain containing 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr10-1008	chr10	99581060	99582793	+	28.8	1733	Intergenic	Intergenic	27629	NR_108035	100505561	Hs.351904	NR_108035	ENSG00000227356	LINC00866	-	long intergenic non-protein coding RNA 866	ncRNA	28.8	4.85	5.93814433	1.30E-10
chr10-1010	chr10	99870592	99872730	+	32.6	2138	Intergenic	AluJr|SINE|Alu	-22720	NM_001256619	27291	Hs.419800	NM_014472	ENSG00000166024	R3HCC1L	C10orf28|GIDRP86|GIDRP88|PSORT	R3H domain and coiled-coil containing 1 like	protein-coding	32.64	1.94	16.82474227	5.00E-22
chr10-1012	chr10	101036640	101037640	+	17.9	1000	Intergenic	L3|LINE|CR1	-41508	NM_001166245	60495	Hs.500750	NM_021828	ENSG00000172987	HPSE2	HPA2|HPR2|UFS|UFS1	heparanase 2 (inactive)	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr10-1014	chr10	102238612	102239612	+	17.9	1000	"intron (NM_003393, intron 2 of 5)"	"intron (NM_003393, intron 2 of 5)"	16300	NM_003393	7479	Hs.421281	NM_003393	ENSG00000075290	WNT8B	-	Wnt family member 8B	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr10-1019	chr10	102864020	102865020	+	17.3	1000	"intron (NR_130722, intron 2 of 2)"	L1ME4a|LINE|L1	26383	NR_130723	100038246	Hs.368784	NM_001085398	ENSG00000236311	TLX1NB	APT-B7|TD1|TDI	TLX1 neighbor	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr10-1022	chr10	102916237	102917878	+	25	1641	Intergenic	L2a|LINE|L2	-16034	NR_130724	100038246	Hs.368784	NM_001085398	ENSG00000236311	TLX1NB	APT-B7|TD1|TDI	TLX1 neighbor	ncRNA	24.96	4.37	5.711670481	4.38E-09
chr10-1023	chr10	102928598	102929598	+	17.9	1000	Intergenic	AluSq|SINE|Alu	-6981	NR_120620	101927396	Hs.551648	NR_120620	ENSG00000237579	LINC01514	-	long intergenic non-protein coding RNA 1514	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr10-1027	chr10	103527133	103528133	+	17.9	1000	Intergenic	Intergenic	8126	NM_033163	2253	Hs.57710	NM_006119	ENSG00000107831	FGF8	AIGF|FGF-8|HBGF-8|HH6|KAL6	fibroblast growth factor 8	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr10-1029	chr10	105565932	105567721	+	34.6	1789	"intron (NM_014631, intron 1 of 13)"	"intron (NM_014631, intron 1 of 13)"	48338	NM_014631	9644	Hs.678727	NM_014631	ENSG00000107957	SH3PXD2A	FISH|SH3MD1|TKS5	SH3 and PX domains 2A	protein-coding	34.56	6.8	5.082352941	2.10E-11
chr10-1030	chr10	105586981	105590477	+	62.1	3496	"intron (NM_014631, intron 1 of 13)"	"intron (NM_014631, intron 1 of 13)"	26435	NM_014631	9644	Hs.678727	NM_014631	ENSG00000107957	SH3PXD2A	FISH|SH3MD1|TKS5	SH3 and PX domains 2A	protein-coding	62.09	10.68	5.813670412	3.83E-21
chr10-1031	chr10	106061138	106062403	+	19.8	1265	Intergenic	THE1C|LTR|ERVL-MaLR	-21352	NR_120622	101927472	Hs.670333	NR_120622		LOC101927472	-	uncharacterized LOC101927472	ncRNA	19.84	1.46	13.5890411	1.82E-12
chr10-1033	chr10	112086539	112087539	+	17.9	1000	Intergenic	Intergenic	-22332	NM_005871	10285	Hs.632093	NM_005871	ENSG00000119953	SMNDC1	SMNR|SPF30|TDRD16C	survival motor neuron domain containing 1	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr10-1034	chr10	112430339	112432661	+	43.5	2322	"intron (NM_001134363, intron 1 of 13)"	(TA)n|Simple_repeat|Simple_repeat	27345	NM_001134363	282996	Hs.116630	NM_001134363	ENSG00000203867	RBM20	-	RNA binding motif protein 20	protein-coding	43.53	8.74	4.980549199	1.04E-13
chr10-1035	chr10	112965076	112966076	+	18.6	1000	Intergenic	Intergenic	128786	NM_000681	150	Hs.249159	NM_000681	ENSG00000150594	ADRA2A	ADRA2|ADRA2R|ADRAR|ALPHA2AAR|ZNF32	adrenoceptor alpha 2A	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr10-1040	chr10	115352543	115353543	+	18.6	1000	"intron (NM_198060, intron 38 of 41)"	"intron (NM_198060, intron 38 of 41)"	40306	NM_004132	3026	Hs.422542	NM_004132	ENSG00000148702	HABP2	FSAP|HABP|HGFAL|NMTC5|PHBP	hyaluronan binding protein 2	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr10-1044	chr10	115756299	115757299	+	16	1000	Intergenic	L2a|LINE|L2	-47007	NM_000684	153	Hs.99913	NM_000684	ENSG00000043591	ADRB1	ADRB1R|B1AR|BETA1AR|RHR	adrenoceptor beta 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr10-1046	chr10	115825988	115828981	+	39.7	2993	Intergenic	AluSq2|SINE|Alu	23678	NM_000684	153	Hs.99913	NM_000684	ENSG00000043591	ADRB1	ADRB1R|B1AR|BETA1AR|RHR	adrenoceptor beta 1	protein-coding	39.69	7.77	5.108108108	6.49E-13
chr10-1048	chr10	115998241	116000945	+	55	2704	"5' UTR (NM_001320804, exon 1 of 14)"	"5' UTR (NM_001320804, exon 1 of 14)"	220	NM_001320804	340706	Hs.197741	NM_198496	ENSG00000165816	VWA2	AMACO|CCSP-2|NET42	von Willebrand factor A domain containing 2	protein-coding	55.05	3.88	14.18814433	4.51E-34
chr10-1049	chr10	116091744	116092744	+	18.6	1000	"intron (NM_001001936, intron 3 of 18)"	"intron (NM_001001936, intron 3 of 18)"	72293	NM_001001936	84632	Hs.501106	NM_032550	ENSG00000169129	AFAP1L2	CTB-1144G6.4|KIAA1914|XB130	actin filament associated protein 1 like 2	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr10-1051	chr10	116819296	116820842	+	25.6	1546	Intergenic	Intergenic	-33055	NM_207303	26033	Hs.501127	NM_207303	ENSG00000107518	ATRNL1	ALP|bA338L11.1|bA454H24.1	attractin like 1	protein-coding	25.6	4.85	5.278350515	4.26E-09
chr10-1054	chr10	119169111	119170499	+	22.4	1388	Intergenic	Intergenic	-34827	NM_173791	118987	Hs.501149	NM_173791	ENSG00000165650	PDZD8	PDZK8	PDZ domain containing 8	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr10-1057	chr10	119578024	119579279	+	22.4	1255	Intergenic	L2c|LINE|L2	227463	NM_014904	22841	Hs.173656	NM_014904	ENSG00000107560	RAB11FIP2	Rab11-FIP2|nRip11	RAB11 family interacting protein 2	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr10-1060	chr10	120206925	120207925	+	17.9	1000	Intergenic	Intergenic	90805	NR_108045	100506126	Hs.69494	NR_108045	ENSG00000232139	LINC00867	-	long intergenic non-protein coding RNA 867	ncRNA	17.92	3.4	5.270588235	8.42E-07
chr10-1063	chr10	122405688	122406971	+	19.2	1283	Intergenic	Intergenic	48868	NR_103717	404216	Hs.196578	NM_001012711	ENSG00000177234	LINC01561	C10orf85	long intergenic non-protein coding RNA 1561	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr10-1065	chr10	124163089	124164089	+	18.6	1000	"intron (NM_001330178, intron 5 of 13)"	MIRb|SINE|MIR	11770	NM_021622	59338	Hs.643512	NM_021622	ENSG00000107679	PLEKHA1	TAPP1	pleckstrin homology domain containing A1	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr10-1066	chr10	124166119	124167119	+	18.6	1000	"intron (NM_001330178, intron 6 of 13)"	"intron (NM_001330178, intron 6 of 13)"	-9862	NR_037506	100500866		NR_037506	ENSG00000265442	MIR3941	-	microRNA 3941	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr10-1069	chr10	125157923	125158923	+	17.9	1000	Intergenic	MER58A|DNA|hAT-Charlie	244663	NM_004725	9184	Hs.418533	NM_004725	ENSG00000154473	BUB3	BUB3L|hBUB3	"BUB3, mitotic checkpoint protein"	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr10-1070	chr10	125237330	125239889	+	35.8	2559	Intergenic	Intergenic	-187262	NM_153442	2849	Hs.12751	NM_153442	ENSG00000154478	GPR26	-	G protein-coupled receptor 26	protein-coding	35.84	6.8	5.270588235	3.95E-12
chr10-1072	chr10	126485697	126486697	+	16.6	1000	Intergenic	Intergenic	-4157	NM_032182	23172	Hs.280695	NM_032182	ENSG00000165660	FAM175B	ABRO1|KIAA0157	family with sequence similarity 175 member B	protein-coding	16.64	0	17.14115603	3.68E-16
chr10-1075	chr10	129083497	129084497	+	18.6	1000	"intron (NM_001380, intron 29 of 51)"	"intron (NM_001380, intron 29 of 51)"	-89575	NM_001039762	642938	Hs.613882	NM_001039762	ENSG00000188916	FAM196A	C10orf141|INSYN2	family with sequence similarity 196 member A	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr10-1081	chr10	130487708	130488708	+	17.3	1000	Intergenic	Intergenic	403994	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	17.28	2.43	7.111111111	1.14E-07
chr10-1082	chr10	130842753	130844353	+	25.6	1600	Intergenic	Intergenic	-421895	NM_002412	4255	Hs.501522	NM_002412	ENSG00000170430	MGMT	-	O-6-methylguanine-DNA methyltransferase	protein-coding	25.6	2.43	10.53497942	2.44E-14
chr10-1084	chr10	131683129	131684129	+	17.3	1000	"intron (NM_001005463, intron 6 of 15)"	"intron (NM_001005463, intron 6 of 15)"	-41991	NR_036179	100422873		NR_036179	ENSG00000266676	MIR4297	-	microRNA 4297	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr10-1087	chr10	133200336	133201336	+	17.9	1000	Intergenic	Intergenic	-90852	NM_174937	256536	Hs.126575	NM_174937	ENSG00000176769	TCERG1L	-	transcription elongation regulator 1 like	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr10-1094	chr10	536863	543106	+	109.5	6243	"intron (NM_014974, intron 1 of 36)"	"intron (NM_014974, intron 1 of 36)"	147734	NR_049884	100847086		NR_049884	ENSG00000263511	MIR5699	mir-5699	microRNA 5699	ncRNA	109.45	16.99	6.44202472	2.02E-39
chr10-1097	chr10	1016519	1017519	+	16.6	1000	Intergenic	Intergenic	-17330	NM_012341	23560	Hs.215766	NM_012341	ENSG00000107937	GTPBP4	CRFG|NGB|NOG1	GTP binding protein 4	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr10-1098	chr10	1200727	1201727	+	17.3	1000	Intergenic	MIR3|SINE|MIR	-4481	NR_015376	399706	Hs.721191	NM_001010910	ENSG00000229205	LINC00200	C10orf139|NCRNA00200	long intergenic non-protein coding RNA 200	ncRNA	17.28	0	17.80043126	3.68E-16
chr10-110	chr10	72976142	72977666	+	32.6	1524	TTS (NR_038453)	TTS (NR_038453)	1081	NR_038453	728978	Hs.646725	NR_038453	ENSG00000237512	UNC5B-AS1	-	UNC5B antisense RNA 1	ncRNA	32.64	3.88	8.412371134	3.92E-15
chr10-1100	chr10	1212702	1214111	+	23.7	1409	Intergenic	Intergenic	7698	NR_015376	399706	Hs.721191	NM_001010910	ENSG00000229205	LINC00200	C10orf139|NCRNA00200	long intergenic non-protein coding RNA 200	ncRNA	23.68	2.91	8.137457045	4.85E-11
chr10-1108	chr10	3240490	3241490	+	17.9	1000	Intergenic	MLT1B|LTR|ERVL-MaLR	-25957	NR_144639	10531	Hs.528300	NM_014889	ENSG00000107959	PITRM1	MP1|PreP	pitrilysin metallopeptidase 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr10-1111	chr10	5534372	5535654	+	19.2	1282	Intergenic	Intergenic	6520	NM_017422	51806	Hs.180142	NM_017422	ENSG00000178372	CALML5	CLSP	calmodulin like 5	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr10-1113	chr10	5563519	5566566	+	48.6	3047	"intron (NR_120497, intron 1 of 2)"	"intron (NR_120497, intron 1 of 2)"	-1810	NM_005185	810	Hs.239600	NM_005185	ENSG00000178363	CALML3	CLP	calmodulin like 3	protein-coding	48.65	10.68	4.555243446	5.88E-14
chr10-1117	chr10	7764227	7765227	+	17.9	1000	"intron (NM_002216, intron 8 of 20)"	"intron (NM_002216, intron 8 of 20)"	19491	NM_002216	3698	Hs.75285	NM_002216	ENSG00000151655	ITIH2	H2P|SHAP	inter-alpha-trypsin inhibitor heavy chain 2	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr10-1118	chr10	8075557	8080001	+	74.9	4444	Intergenic	Intergenic	16675	NR_104329	399717	Hs.158992	NM_207423	ENSG00000197308	GATA3-AS1	-	GATA3 antisense RNA 1	ncRNA	74.89	10.68	7.012172285	3.19E-29
chr10-1120	chr10	9719708	9721280	+	26.2	1572	Intergenic	Intergenic	-380191	NR_120636	101928298	Hs.385576	NR_120636	ENSG00000224788	LOC101928298	-	uncharacterized LOC101928298	ncRNA	26.24	3.88	6.762886598	1.00E-10
chr10-1127	chr10	17327902	17328902	+	17.3	1000	Intergenic	Intergenic	-56418	NR_108061	100507347	Hs.740502	NR_108060	ENSG00000229124	VIM-AS1	-	VIM antisense RNA 1	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr10-1128	chr10	20103567	20105609	+	34.6	2042	promoter-TSS (NM_001282736)	promoter-TSS (NM_001282736)	-784	NM_001282736	84898	Hs.99472	NM_032812	ENSG00000120594	PLXDC2	TEM7R	plexin domain containing 2	protein-coding	34.56	3.4	10.16470588	1.99E-18
chr10-1133	chr10	23280712	23281712	+	17.3	1000	"intron (NM_173081, intron 10 of 18)"	"intron (NM_173081, intron 10 of 18)"	64259	NM_001282747	219681	Hs.659807	NM_173081	ENSG00000165309	ARMC3	CT81|KU-CT-1	armadillo repeat containing 3	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr10-1134	chr10	23291161	23292161	+	17.3	1000	"intron (NM_173081, intron 12 of 18)"	AluSz6|SINE|Alu	74708	NM_001282747	219681	Hs.659807	NM_173081	ENSG00000165309	ARMC3	CT81|KU-CT-1	armadillo repeat containing 3	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr10-1136	chr10	26505661	26507209	+	25.6	1548	"intron (NM_001134366, intron 1 of 15)"	CpG	1199	NM_001134366	2572	Hs.231829	NM_000818	ENSG00000136750	GAD2	GAD65	glutamate decarboxylase 2	protein-coding	25.6	1.94	13.19587629	4.03E-16
chr10-1137	chr10	28590154	28591154	+	17.9	1000	"intron (NM_001318170, intron 1 of 16)"	"intron (NM_001318170, intron 1 of 16)"	1341	NM_001318170	143098	Hs.499159	NM_173496	ENSG00000150054	MPP7	-	membrane palmitoylated protein 7	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr10-1139	chr10	30642523	30643523	+	17.3	1000	Intergenic	Intergenic	-4756	NM_018109	55149	Hs.173946	NM_018109	ENSG00000107951	MTPAP	PAPD1|SPAX4	mitochondrial poly(A) polymerase	protein-coding	17.28	0	17.80043126	3.68E-16
chr10-1142	chr10	33567600	33569143	+	23.7	1543	"intron (NM_001024628, intron 2 of 11)"	MLT1E3|LTR|ERVL-MaLR	55462	NM_001330068	8829	Hs.131704	NM_003873	ENSG00000099250	NRP1	BDCA4|CD304|NP1|NRP|VEGF165R	neuropilin 1	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr10-1143	chr10	33623928	33625203	+	19.8	1275	promoter-TSS (NM_001244972)	promoter-TSS (NM_001244972)	-732	NM_001244973	8829	Hs.131704	NM_003873	ENSG00000099250	NRP1	BDCA4|CD304|NP1|NRP|VEGF165R	neuropilin 1	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr10-1149	chr10	43776171	43777171	+	16.6	1000	Intergenic	MIR|SINE|MIR	-14304	NM_145313	221002	Hs.125293	NM_145313	ENSG00000198915	RASGEF1A	CG4853	RasGEF domain family member 1A	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr10-1150	chr10	43812836	43813836	+	17.3	1000	Intergenic	Intergenic	-50969	NM_145313	221002	Hs.125293	NM_145313	ENSG00000198915	RASGEF1A	CG4853	RasGEF domain family member 1A	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr10-1151	chr10	44176841	44177841	+	16.6	1000	Intergenic	L2|LINE|L2	-33015	NM_001324166	7580	Hs.522885	NM_006973	ENSG00000169740	ZNF32	KOX30	zinc finger protein 32	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr10-1156	chr10	45868323	45869323	+	17.3	1000	promoter-TSS (NM_001320862)	promoter-TSS (NM_001320862)	-791	NM_001256154	240	Hs.89499	NM_000698	ENSG00000012779	ALOX5	5-LO|5-LOX|5LPG|LOG5	arachidonate 5-lipoxygenase	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr10-1184	chr10	71417437	71421676	+	63.4	4239	Intergenic	Intergenic	29553	NM_145306	219738	Hs.522992	NM_145306	ENSG00000171224	C10orf35	-	chromosome 10 open reading frame 35	protein-coding	63.37	10.19	6.218842002	9.63E-23
chr10-1185	chr10	71508307	71509307	+	17.3	1000	Intergenic	MIRc|SINE|MIR	-52837	NM_080802	1305	Hs.695934	NM_005203	ENSG00000197467	COL13A1	CMS19|COLXIIIA1	collagen type XIII alpha 1 chain	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr10-1189	chr10	71697695	71699195	+	24.3	1500	"intron (NM_001320951, intron 32 of 37)"	"intron (NM_001320951, intron 32 of 37)"	-113912	NM_018649	55506	Hs.499953	NM_018649	ENSG00000099284	H2AFY2	macroH2A2	H2A histone family member Y2	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr10-1195	chr10	72808562	72812206	+	51.2	3644	Intergenic	Intergenic	111574	NR_134313	105378349	Hs.119164	NR_134313	ENSG00000259267	LOC105378349	-	uncharacterized LOC105378349	ncRNA	51.21	9.71	5.273944387	1.19E-16
chr10-1199	chr10	73042340	73043706	+	21.8	1366	"intron (NM_170744, intron 2 of 16)"	MIR3|SINE|MIR	-35987	NR_033414	55315	Hs.438419	NM_018344	ENSG00000198246	SLC29A3	ENT3|HCLAP|HJCD|PHID	solute carrier family 29 member 3	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr10-1201	chr10	73163916	73164916	+	16.6	1000	"intron (NM_052836, intron 1 of 12)"	"intron (NM_052836, intron 1 of 12)"	7725	NM_022124	64072	Hs.656032	NM_022124	ENSG00000107736	CDH23	CDHR23|USH1D	cadherin related 23	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr10-1202	chr10	73260430	73262951	+	43.5	2521	"intron (NM_052836, intron 3 of 12)"	"intron (NM_052836, intron 3 of 12)"	9987	NR_120672	102723377	Hs.568789	NR_120672	ENSG00000223817	CDH23-AS1	C10orf106|NCRNA00223|bA327E2.3	CDH23 antisense RNA 1	ncRNA	43.53	6.8	6.401470588	8.79E-17
chr10-1204	chr10	73280694	73284404	+	50.6	3710	"intron (NM_052836, intron 6 of 12)"	"intron (NM_052836, intron 6 of 12)"	-10872	NR_120672	102723377	Hs.568789	NR_120672	ENSG00000223817	CDH23-AS1	C10orf106|NCRNA00223|bA327E2.3	CDH23 antisense RNA 1	ncRNA	50.57	5.82	8.689003436	2.68E-23
chr10-1205	chr10	73345568	73347341	+	28.2	1773	"intron (NM_052836, intron 9 of 12)"	L1ME3F|LINE|L1	-74777	NR_120672	102723377	Hs.568789	NR_120672	ENSG00000223817	CDH23-AS1	C10orf106|NCRNA00223|bA327E2.3	CDH23 antisense RNA 1	ncRNA	28.16	5.34	5.27340824	7.39E-10
chr10-1208	chr10	73786719	73787719	+	16	1000	Intergenic	Intergenic	61312	NM_001244950	9806	Hs.523009	NM_014767	ENSG00000107742	SPOCK2	testican-2	"SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2"	protein-coding	16	1.46	10.95890411	3.44E-09
chr10-1212	chr10	78955965	78956965	+	16.6	1000	"intron (NM_001322832, intron 3 of 27)"	"intron (NM_001322832, intron 3 of 27)"	55876	NR_120654	101929310	Hs.666457	NR_120654	ENSG00000225497	KCNMA1-AS2	-	KCNMA1 antisense RNA 2	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr10-1213	chr10	79043026	79044026	+	17.3	1000	"intron (NM_001271518, intron 1 of 27)"	"intron (NM_001271518, intron 1 of 27)"	66993	NM_001322838	3778	Hs.144795	NM_002247	ENSG00000156113	KCNMA1	BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1	potassium calcium-activated channel subfamily M alpha 1	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr10-1217	chr10	80149759	80151025	+	17.9	1266	Intergenic	MIR|SINE|MIR	123307	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr10-1220	chr10	80537141	80538420	+	18.6	1279	Intergenic	Intergenic	289425	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr10-1229	chr10	82452293	82453685	+	18.6	1392	Intergenic	Intergenic	152414	NM_001145719	387694	Hs.147643	NM_207372	ENSG00000178217	SH2D4B	-	SH2 domain containing 4B	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr10-1230	chr10	86470195	86471195	+	16	1000	Intergenic	HAL1|LINE|L1	285757	NM_001284242	54462	Hs.461988	NM_018999	ENSG00000107771	CCSER2	FAM190B|Gcap14|KIAA1128|bA486O22.1	coiled-coil serine rich protein 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr10-1231	chr10	87940342	87941600	+	20.5	1258	"intron (NM_017551, intron 3 of 15)"	"intron (NM_017551, intron 3 of 15)"	83574	NR_029907	442911		NR_029907	ENSG00000199104	MIR346	MIRN346|hsa-mir-346|miR-346|miRNA346	microRNA 346	ncRNA	20.48	4.37	4.686498856	6.64E-07
chr10-1232	chr10	88082777	88083777	+	16.6	1000	"intron (NM_017551, intron 2 of 15)"	L1ME3C|LINE|L1	42973	NM_017551	2894	Hs.530653	NM_017551	ENSG00000182771	GRID1	GluD1	glutamate ionotropic receptor delta type subunit 1	protein-coding	16.64	0	17.14115603	3.68E-16
chr10-1239	chr10	91760392	91761392	+	16	1000	Intergenic	MIRb|SINE|MIR	-43762	NR_110655	101926924	Hs.500498	NR_110655	ENSG00000226159	LINC01375	-	long intergenic non-protein coding RNA 1375	ncRNA	16	3.88	4.12371134	7.91E-05
chr10-1240	chr10	92551226	92552607	+	20.5	1381	"intron (NM_000872, intron 1 of 2)"	"intron (NM_000872, intron 1 of 2)"	65755	NM_000872	3363	Hs.73739	NM_000872	ENSG00000148680	HTR7	5-HT7	5-hydroxytryptamine receptor 7	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr10-1244	chr10	97110799	97111799	+	17.9	1000	"intron (NM_001034954, intron 22 of 30)"	"intron (NM_001034954, intron 22 of 30)"	-60394	NM_020992	9124	Hs.368525	NM_020992	ENSG00000107438	PDLIM1	CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1	PDZ and LIM domain 1	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr10-1245	chr10	97114265	97115265	+	16.6	1000	"intron (NM_001034954, intron 21 of 30)"	"intron (NM_001034954, intron 21 of 30)"	-63860	NM_020992	9124	Hs.368525	NM_020992	ENSG00000107438	PDLIM1	CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1	PDZ and LIM domain 1	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr10-1247	chr10	97222688	97223688	+	16.6	1000	"intron (NM_015385, intron 2 of 24)"	"intron (NM_015385, intron 2 of 24)"	-22251	NM_001290296	10580	Hs.38621	NM_006434	ENSG00000095637	SORBS1	CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1	sorbin and SH3 domain containing 1	protein-coding	16.64	0	17.14115603	3.68E-16
chr10-1249	chr10	97297427	97298427	+	17.3	1000	"intron (NM_015385, intron 1 of 24)"	"intron (NM_015385, intron 1 of 24)"	23250	NM_015385	10580	Hs.38621	NM_006434	ENSG00000095637	SORBS1	CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1	sorbin and SH3 domain containing 1	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr10-1252	chr10	99372076	99373076	+	16.6	1000	TTS (NM_001134670)	TTS (NM_001134670)	20768	NM_178832	118812	Hs.217409	NM_178832	ENSG00000171160	MORN4	C10orf83|bA548K23.4|rtp	MORN repeat containing 4	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr10-1255	chr10	99626431	99627431	+	17.3	1000	"3' UTR (NM_001010917, exon 5 of 5)"	"3' UTR (NM_001010917, exon 5 of 5)"	16936	NM_001010917	401647	Hs.567524	NM_001010917	ENSG00000155265	GOLGA7B	C10orf132|C10orf133|bA451M19.3|bA459F3.4	golgin A7 family member B	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr10-1259	chr10	101092860	101093860	+	16.6	1000	"intron (NR_144311, intron 1 of 10)"	AluSx|SINE|Alu	4504	NM_001345889	26507	Hs.274579	NM_020348	ENSG00000119946	CNNM1	ACDP1|CLP-1	cyclin and CBS domain divalent metal cation transport mediator 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr10-1261	chr10	101298263	101300139	+	41	1876	Intergenic	Intergenic	6511	NM_145285	159296	Hs.243272	NM_145285	ENSG00000119919	NKX2-3	CSX3|NK2.3|NKX2.3|NKX2C|NKX4-3	NK2 homeobox 3	protein-coding	40.97	3.88	10.55927835	5.31E-22
chr10-1263	chr10	102088551	102091628	+	43.5	3077	"5' UTR (NM_001253837, exon 1 of 16)"	"5' UTR (NM_001253837, exon 1 of 16)"	154	NM_001253837	9033	Hs.159241	NM_016112	ENSG00000107593	PKD2L1	PCL|PKD2L|PKDL|TRPP3	"polycystin 2 like 1, transient receptor potential cation channel"	protein-coding	43.53	8.25	5.276363636	2.15E-14
chr10-1264	chr10	102384186	102388835	+	58.2	4649	Intergenic	L1MB8|LINE|L1	90869	NM_017902	55662	Hs.500788	NM_017902	ENSG00000166135	HIF1AN	FIH1	hypoxia inducible factor 1 alpha subunit inhibitor	protein-coding	58.25	7.77	7.496782497	3.81E-24
chr10-1269	chr10	102545420	102549132	+	49.3	3712	"intron (NM_003987, intron 6 of 10)"	"intron (NM_003987, intron 6 of 10)"	41808	NM_003989	5076	Hs.155644	NM_000278	ENSG00000075891	PAX2	FSGS7|PAPRS	paired box 2	protein-coding	49.29	7.77	6.343629344	2.96E-18
chr10-1277	chr10	102955883	102956883	+	16	1000	Intergenic	Intergenic	20304	NR_120620	101927396	Hs.551648	NR_120620	ENSG00000237579	LINC01514	-	long intergenic non-protein coding RNA 1514	ncRNA	16	1.94	8.24742268	7.67E-08
chr10-1279	chr10	102959846	102961122	+	21.8	1276	Intergenic	Intergenic	24405	NR_120620	101927396	Hs.551648	NR_120620	ENSG00000237579	LINC01514	-	long intergenic non-protein coding RNA 1514	ncRNA	21.76	3.88	5.608247423	2.53E-08
chr10-1282	chr10	102989363	102991581	+	35.8	2218	"intron (NR_029380, intron 1 of 2)"	"intron (NR_029380, intron 1 of 2)"	1121	NR_029380	399806	Hs.386143	NR_029380		LBX1-AS1	MUSE	LBX1 antisense RNA 1 (head to head)	ncRNA	35.84	4.85	7.389690722	1.37E-15
chr10-1284	chr10	103086267	103087527	+	19.8	1260	Intergenic	THE1A-int|LTR|ERVL-MaLR	-26893	NM_001256856	8945	Hs.643802	NM_003939	ENSG00000166167	BTRC	BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP	beta-transducin repeat containing E3 ubiquitin protein ligase	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr10-1288	chr10	105349088	105350088	+	17.9	1000	"intron (NM_004210, intron 5 of 5)"	"intron (NM_004210, intron 5 of 5)"	-72389	NR_120675	102724341	Hs.599425	NR_120675	ENSG00000235470	NEURL1-AS1	-	NEURL1 antisense RNA 1	ncRNA	17.92	2.43	7.374485597	1.53E-08
chr10-1289	chr10	105396317	105397317	+	17.9	1000	"intron (NM_014631, intron 8 of 13)"	L2b|LINE|L2	-109720	NR_038940	100505839	Hs.655149	NR_038940	ENSG00000280693	SH3PXD2A-AS1	-	SH3PXD2A antisense RNA 1	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr10-1293	chr10	105956854	105957854	+	17.9	1000	"intron (NM_025145, intron 9 of 37)"	"intron (NM_025145, intron 9 of 37)"	21287	NR_030340	693194		NR_030340	ENSG00000208033	MIR609	MIRN609|hsa-mir-609	microRNA 609	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr10-1294	chr10	106350113	106352802	+	35.2	2689	Intergenic	Intergenic	-49402	NM_014978	22986	Hs.671950	NM_014978	ENSG00000156395	SORCS3	SORCS	sortilin related VPS10 domain containing receptor 3	protein-coding	35.2	4.37	8.054919908	8.51E-16
chr10-1298	chr10	113015796	113016796	+	17.9	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	179506	NM_000681	150	Hs.249159	NM_000681	ENSG00000150594	ADRA2A	ADRA2|ADRA2R|ADRAR|ALPHA2AAR|ZNF32	adrenoceptor alpha 2A	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr10-1299	chr10	114051118	114052118	+	17.3	1000	"intron (NM_058222, intron 4 of 9)"	AluY|SINE|Alu	-7752	NR_106771	102466189		NR_106771	ENSG00000276857	MIR6715A	hsa-mir-6715a	microRNA 6715a	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr10-1300	chr10	114076885	114078837	+	30.1	1952	"intron (NR_028134, intron 12 of 18)"	"intron (NR_028134, intron 12 of 18)"	-18415	NR_106772	102465427		NR_106772	ENSG00000283688	MIR6715B	hsa-mir-6715b	microRNA 6715b	ncRNA	30.08	3.88	7.75257732	2.58E-13
chr10-1303	chr10	115279621	115280998	+	23	1377	Intergenic	Intergenic	-30281	NM_001177660	3026	Hs.422542	NM_004132	ENSG00000148702	HABP2	FSAP|HABP|HGFAL|NMTC5|PHBP	hyaluronan binding protein 2	protein-coding	23.04	4.37	5.272311213	2.46E-08
chr10-1304	chr10	115328289	115329289	+	17.3	1000	"intron (NM_001177660, intron 2 of 12)"	L3|LINE|CR1	16052	NM_004132	3026	Hs.422542	NM_004132	ENSG00000148702	HABP2	FSAP|HABP|HGFAL|NMTC5|PHBP	hyaluronan binding protein 2	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr10-1306	chr10	115738126	115739874	+	28.2	1748	Intergenic	Intergenic	-64806	NM_000684	153	Hs.99913	NM_000684	ENSG00000043591	ADRB1	ADRB1R|B1AR|BETA1AR|RHR	adrenoceptor beta 1	protein-coding	28.16	5.82	4.838487973	3.50E-09
chr10-1309	chr10	115993457	115994457	+	17.9	1000	Intergenic	Intergenic	-5056	NM_001272046	340706	Hs.197741	NM_198496	ENSG00000165816	VWA2	AMACO|CCSP-2|NET42	von Willebrand factor A domain containing 2	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr10-131	chr10	115711783	115720554	+	158.7	8771	Intergenic	THE1B|LTR|ERVL-MaLR	-87638	NM_000684	153	Hs.99913	NM_000684	ENSG00000043591	ADRB1	ADRB1R|B1AR|BETA1AR|RHR	adrenoceptor beta 1	protein-coding	158.74	32.04	4.95443196	2.81E-45
chr10-1311	chr10	118033742	118035404	+	26.9	1662	Intergenic	Intergenic	-1416	NM_001145453	2674	Hs.388347	NM_005264	ENSG00000151892	GFRA1	GDNFR|GDNFRA|GFR-ALPHA-1|RET1L|RETL1|TRNR1	GDNF family receptor alpha 1	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr10-1313	chr10	118083838	118084838	+	17.9	1000	"intron (NM_198515, intron 1 of 8)"	"intron (NM_198515, intron 1 of 8)"	398	NM_198515	374355	Hs.233407	NM_198515	ENSG00000182645	CCDC172	C10orf96	coiled-coil domain containing 172	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr10-1315	chr10	118830878	118832129	+	20.5	1251	"intron (NM_001258300, intron 1 of 17)"	MER124|DNA?|DNA?	54594	NM_001258300	57698	Hs.501140	NM_018330	ENSG00000187164	SHTN1	KIAA1598|shootin-1	shootin 1	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr10-1316	chr10	119261231	119262231	+	17.3	1000	"intron (NR_002791, intron 2 of 3)"	MIR3|SINE|MIR	-40225	NM_001165924	2018	Hs.202095	NM_004098	ENSG00000170370	EMX2	-	empty spiracles homeobox 2	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr10-1318	chr10	119359572	119360572	+	16.6	1000	Intergenic	Intergenic	-55493	NR_002791	196047	Hs.312592	NR_002791	ENSG00000229847	EMX2OS	EMX2-AS1|NCRNA00045	EMX2 opposite strand/antisense RNA	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr10-1323	chr10	120328806	120330176	+	25	1370	Intergenic	L1MDa|LINE|L1	25669	NM_004248	2834	Hs.248119	NM_004248	ENSG00000119973	PRLHR	GPR10|GR3|PrRPR	prolactin releasing hormone receptor	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr10-1324	chr10	120652096	120653096	+	17.9	1000	Intergenic	THE1B|LTR|ERVL-MaLR	-136632	NM_199461	340719	Hs.591918	NM_199461	ENSG00000188613	NANOS1	EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A	nanos C2HC-type zinc finger 1	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr10-1325	chr10	121933801	121935061	+	19.2	1260	Intergenic	Intergenic	216406	NR_039830	100616322		NR_039830	ENSG00000265370	MIR4682	-	microRNA 4682	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr10-1328	chr10	122539899	122540899	+	17.9	1000	"intron (NR_033850, intron 1 of 2)"	"intron (NR_033850, intron 1 of 2)"	-70288	NM_018117	55717	Hs.144447	NM_018117	ENSG00000120008	WDR11	BRWD2|DR11|HH14|SRI1|WDR15	WD repeat domain 11	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr10-1330	chr10	123468534	123469534	+	17.3	1000	Intergenic	Intergenic	-111062	NR_073009	2263	Hs.533683	NM_000141	ENSG00000066468	FGFR2	BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25	fibroblast growth factor receptor 2	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr10-1334	chr10	124474016	124475016	+	17.9	1000	Intergenic	MIRc|SINE|MIR	-15178	NM_001010912	399814	Hs.363649	NM_001010912	ENSG00000183559	C10orf120	bA318C4.1	chromosome 10 open reading frame 120	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr10-1336	chr10	124878050	124879050	+	17.9	1000	Intergenic	Intergenic	-17017	NM_001105574	340784	Hs.531194	NM_001105574	ENSG00000188620	HMX3	NKX-5.1|NKX5.1|Nkx5-1	H6 family homeobox 3	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr10-1341	chr10	125196846	125197846	+	17.3	1000	Intergenic	MLT1H2|LTR|ERVL-MaLR	-228525	NM_153442	2849	Hs.12751	NM_153442	ENSG00000154478	GPR26	-	G protein-coupled receptor 26	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr10-1343	chr10	125610796	125611796	+	16.6	1000	"intron (NM_198148, intron 3 of 13)"	AluSc8|SINE|Alu	40204	NM_198148	119587	Hs.656887	NM_198148	ENSG00000121898	CPXM2	CPX2|UNQ676	"carboxypeptidase X, M14 family member 2"	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr10-1346	chr10	126553406	126554671	+	20.5	1265	Intergenic	AluSz|SINE|Alu	63684	NM_032182	23172	Hs.280695	NM_032182	ENSG00000165660	FAM175B	ABRO1|KIAA0157	family with sequence similarity 175 member B	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr10-1347	chr10	127013745	127014997	+	18.6	1252	Intergenic	Intergenic	-164741	NM_001083914	1488	Hs.501345	NM_001329	ENSG00000175029	CTBP2	-	C-terminal binding protein 2	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr10-135	chr10	498790	500645	+	39.7	1855	"intron (NM_014974, intron 3 of 36)"	"intron (NM_014974, intron 3 of 36)"	-171691	NR_106988	102465753		NR_106988	ENSG00000280494	MIR7641-2	B-ATF|hsa-mir-7641-2	microRNA 7641-2	ncRNA	39.69	5.82	6.819587629	3.74E-16
chr10-1352	chr10	129222988	129223988	+	16.6	1000	"intron (NM_001380, intron 46 of 51)"	"intron (NM_001380, intron 46 of 51)"	-124125	NM_001030013	594857	Hs.643423	NM_001030013	ENSG00000214285	NPS	-	neuropeptide S	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr10-1354	chr10	130072585	130074886	+	34.6	2301	Intergenic	Intergenic	-10479	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	34.56	6.8	5.082352941	2.10E-11
chr10-1363	chr10	131696903	131697903	+	17.3	1000	"intron (NM_001005463, intron 6 of 15)"	CpG	-55765	NR_036179	100422873		NR_036179	ENSG00000266676	MIR4297	-	microRNA 4297	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr10-1364	chr10	132283765	132284765	+	16.6	1000	Intergenic	Intergenic	349592	NM_001321980	10539	Hs.42644	NM_006541	ENSG00000108010	GLRX3	GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3	glutaredoxin 3	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr10-1365	chr10	132402953	132403953	+	17.9	1000	Intergenic	Intergenic	357478	NR_036180	100422867		NR_036180	ENSG00000264803	MIR378C	mir-378c	microRNA 378c	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr10-1366	chr10	132569687	132570687	+	17.9	1000	Intergenic	Intergenic	190744	NR_036180	100422867		NR_036180	ENSG00000264803	MIR378C	mir-378c	microRNA 378c	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr10-1369	chr10	132862778	132863778	+	17.9	1000	Intergenic	Intergenic	-30203	NR_120623	101927489		NR_120623	ENSG00000230098	TCERG1L-AS1	-	TCERG1L antisense RNA 1	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr10-1371	chr10	133333094	133334413	+	17.9	1319	Intergenic	Intergenic	-223769	NM_174937	256536	Hs.126575	NM_174937	ENSG00000176769	TCERG1L	-	transcription elongation regulator 1 like	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr10-1372	chr10	133335989	133337248	+	21.8	1259	Intergenic	L1MA7|LINE|L1	-226634	NM_174937	256536	Hs.126575	NM_174937	ENSG00000176769	TCERG1L	-	transcription elongation regulator 1 like	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr10-1374	chr10	133925451	133927699	+	36.5	2248	"intron (NM_001323090, intron 2 of 23)"	"intron (NM_001323090, intron 2 of 23)"	47104	NM_001323090	282973	Hs.106254	NM_194303	ENSG00000188385	JAKMIP3	C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5	Janus kinase and microtubule interacting protein 3	protein-coding	36.48	6.31	5.781299525	7.13E-13
chr10-1376	chr10	134283690	134286356	+	36.5	2666	Intergenic	L1MEg|LINE|L1	26309	NM_173541	170393	Hs.375059	NM_173541		C10orf91	bA432J24.4	chromosome 10 open reading frame 91	protein-coding	36.48	8.74	4.173913043	1.05E-09
chr10-1377	chr10	134314214	134316059	+	30.7	1845	Intergenic	Intergenic	-36147	NM_005539	3632	Hs.523360	NM_005539	ENSG00000068383	INPP5A	5PTASE	inositol polyphosphate-5-phosphatase A	protein-coding	30.72	5.34	5.752808989	2.29E-11
chr10-1379	chr10	134728696	134729696	+	17.9	1000	"intron (NM_001200049, intron 17 of 57)"	"intron (NM_001200049, intron 17 of 57)"	26893	NM_001200049	54777	Hs.298038	NM_017609	ENSG00000171811	CFAP46	C10orf123|C10orf124|C10orf92|C10orf93|TTC40|bA288G11.4|bA288G11.5|bB137A17.2|bB137A17.3	cilia and flagella associated protein 46	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr10-1381	chr10	134851164	134852164	+	17.3	1000	Intergenic	Intergenic	48537	NR_111905	100128127	Hs.694139	NR_111905		ADGRA1-AS1	GPR123-AS1	adhesion G protein-coupled receptor A1 antisense RNA 1	ncRNA	17.28	2.43	7.111111111	1.14E-07
chr10-1382	chr10	135140643	135141905	+	19.8	1262	"intron (NM_015722, intron 3 of 5)"	"intron (NM_015722, intron 3 of 5)"	9201	NM_015722	50632	Hs.148680	NM_015722	ENSG00000130643	CALY	DRD1IP|NSG3	calcyon neuron specific vesicular protein	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr10-1386	chr10	582916	584236	+	19.2	1320	"intron (NM_014974, intron 1 of 36)"	"intron (NM_014974, intron 1 of 36)"	104142	NR_049884	100847086		NR_049884	ENSG00000263511	MIR5699	mir-5699	microRNA 5699	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr10-1390	chr10	1240463	1241463	+	16.6	1000	"intron (NM_018702, intron 8 of 9)"	"intron (NM_018702, intron 8 of 9)"	35255	NR_015376	399706	Hs.721191	NM_001010910	ENSG00000229205	LINC00200	C10orf139|NCRNA00200	long intergenic non-protein coding RNA 200	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr10-1393	chr10	1468324	1469666	+	23.7	1342	"intron (NM_018702, intron 1 of 9)"	"intron (NM_018702, intron 1 of 9)"	-99830	NR_033387	642394	Hs.568831	NM_001098830	ENSG00000205696	ADARB2-AS1	C10orf109|NCRNA00168|bA466B20.1	ADARB2 antisense RNA 1	ncRNA	23.68	4.85	4.882474227	1.15E-07
chr10-1394	chr10	1520932	1521932	+	17.3	1000	"intron (NM_018702, intron 1 of 9)"	"intron (NM_018702, intron 1 of 9)"	-47393	NR_033387	642394	Hs.568831	NM_001098830	ENSG00000205696	ADARB2-AS1	C10orf109|NCRNA00168|bA466B20.1	ADARB2 antisense RNA 1	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr10-1395	chr10	1719000	1721498	+	41	2498	"intron (NM_018702, intron 1 of 9)"	"intron (NM_018702, intron 1 of 9)"	59421	NM_018702	105	Hs.586663	NM_018702	ENSG00000185736	ADARB2	ADAR3|RED2	"adenosine deaminase, RNA specific B2 (inactive)"	protein-coding	40.97	7.77	5.272844273	1.22E-13
chr10-1397	chr10	2469001	2470001	+	17.3	1000	Intergenic	Intergenic	74153	NR_136146	105376351	Hs.343482	NR_136146		LOC105376351	-	uncharacterized LOC105376351	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr10-1398	chr10	2490462	2491462	+	17.3	1000	"intron (NR_136146, intron 1 of 2)"	"intron (NR_136146, intron 1 of 2)"	52692	NR_136146	105376351	Hs.343482	NR_136146		LOC105376351	-	uncharacterized LOC105376351	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr10-1399	chr10	3071964	3073536	+	21.8	1572	Intergenic	Intergenic	-36962	NM_002627	5214	Hs.26010	NM_002627	ENSG00000067057	PFKP	ATP-PFK|PFK-C|PFK-P|PFKF	"phosphofructokinase, platelet"	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr10-1405	chr10	6028258	6029558	+	21.8	1300	Intergenic	Intergenic	-8758	NM_001243539	3601	Hs.445124	NM_002189	ENSG00000134470	IL15RA	CD215	interleukin 15 receptor subunit alpha	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr10-1414	chr10	10848648	10849648	+	17.3	1000	"intron (NM_001326326, intron 1 of 14)"	MER31-int|LTR|ERV1	8474	NM_001326327	10659	Hs.309288	NM_006561	ENSG00000048740	CELF2	BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR	"CUGBP, Elav-like family member 2"	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr10-1422	chr10	14515465	14519591	+	62.1	4126	Intergenic	MER1A|DNA|hAT-Charlie	38953	NR_031668	100302116		NR_031668	ENSG00000221371	MIR1265	MIRN1265|hsa-mir-1265	microRNA 1265	ncRNA	62.09	9.71	6.394438723	8.28E-23
chr10-1423	chr10	15387150	15388417	+	20.5	1267	"intron (NM_001010924, intron 1 of 7)"	"intron (NM_001010924, intron 1 of 7)"	25275	NM_001010924	221061	Hs.66762	NM_001010924	ENSG00000148468	FAM171A1	C10orf38	family with sequence similarity 171 member A1	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr10-1424	chr10	15411195	15412721	+	28.2	1526	"intron (NM_001010924, intron 1 of 7)"	"intron (NM_001010924, intron 1 of 7)"	1100	NM_001010924	221061	Hs.66762	NM_001010924	ENSG00000148468	FAM171A1	C10orf38	family with sequence similarity 171 member A1	protein-coding	28.16	1.94	14.51546392	1.99E-18
chr10-1425	chr10	18428473	18429739	+	18.6	1266	promoter-TSS (NM_001167945)	promoter-TSS (NM_001167945)	-500	NM_201596	783	Hs.59093	NM_000724	ENSG00000165995	CACNB2	CACNLB2|CAVB2|MYSB	calcium voltage-gated channel auxiliary subunit beta 2	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr10-1430	chr10	22766535	22767535	+	17.3	1000	Intergenic	CpG	-40177	NR_036533	100499489	Hs.7444	NR_036533		LOC100499489	-	uncharacterized LOC100499489	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr10-1431	chr10	23484738	23485738	+	16.6	1000	Intergenic	Intergenic	3778	NM_178161	256297	Hs.351503	NM_178161	ENSG00000168267	PTF1A	PACA|PAGEN2|PTF1-p48|bHLHa29	"pancreas specific transcription factor, 1a"	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr10-1433	chr10	28552362	28553362	+	16.6	1000	"intron (NM_173496, intron 2 of 18)"	"intron (NM_173496, intron 2 of 18)"	18164	NM_173496	143098	Hs.499159	NM_173496	ENSG00000150054	MPP7	-	membrane palmitoylated protein 7	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr10-1435	chr10	29421010	29422010	+	17.3	1000	Intergenic	Intergenic	-156480	NM_032517	84569	Hs.558572	NM_032517	ENSG00000120563	LYZL1	KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1	lysozyme like 1	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr10-1442	chr10	31954363	31955363	+	17.3	1000	Intergenic	MER4A1|LTR|ERV1	242991	NM_001270699	94134	Hs.499264	NM_018287	ENSG00000165322	ARHGAP12	-	Rho GTPase activating protein 12	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr10-145	chr10	73303303	73307565	+	77.4	4262	"intron (NM_052836, intron 6 of 12)"	L2a|LINE|L2	-33757	NR_120672	102723377	Hs.568789	NR_120672	ENSG00000223817	CDH23-AS1	C10orf106|NCRNA00223|bA327E2.3	CDH23 antisense RNA 1	ncRNA	77.45	18.44	4.20010846	2.85E-19
chr10-1453	chr10	43712233	43713523	+	20.5	1290	"intron (NM_145313, intron 1 of 12)"	"intron (NM_145313, intron 1 of 12)"	12309	NM_001282862	221002	Hs.125293	NM_145313	ENSG00000198915	RASGEF1A	CG4853	RasGEF domain family member 1A	protein-coding	20.48	2.43	8.427983539	2.25E-10
chr10-1456	chr10	44167793	44171445	+	51.2	3652	"non-coding (NR_038867, exon 5 of 5)"	"non-coding (NR_038867, exon 5 of 5)"	-25293	NM_001324166	7580	Hs.522885	NM_006973	ENSG00000169740	ZNF32	KOX30	zinc finger protein 32	protein-coding	51.21	7.77	6.590733591	6.93E-20
chr10-1457	chr10	44285613	44286613	+	17.3	1000	promoter-TSS (NR_002726)	promoter-TSS (NR_002726)	-248	NR_002726	10151	Hs.632956	NR_002726		HNRNPA3P1	D10S102|FBRNP|HNRPA3|HNRPA3P1	heterogeneous nuclear ribonucleoprotein A3 pseudogene 1	pseudo	17.28	3.88	4.453608247	1.81E-05
chr10-1459	chr10	44887729	44889036	+	19.2	1307	Intergenic	Intergenic	-7837	NM_001033886	6387	Hs.522891	NM_000609	ENSG00000107562	CXCL12	IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1	C-X-C motif chemokine ligand 12	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr10-1462	chr10	45355851	45356851	+	17.3	1000	"intron (NR_033842, intron 2 of 7)"	MIR|SINE|MIR	-50413	NM_001123376	643236	Hs.292788	NM_001123376	ENSG00000187783	TMEM72	C10orf127|KSP37	transmembrane protein 72	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr10-1485	chr10	48353630	48354630	+	16	1000	promoter-TSS (NM_153034)	promoter-TSS (NM_153034)	-894	NM_001346932	118738	Hs.27788	NM_153034	ENSG00000265763	ZNF488	-	zinc finger protein 488	protein-coding	16	3.88	4.12371134	7.91E-05
chr10-1486	chr10	48383268	48385577	+	37.8	2309	"intron (NM_002900, intron 2 of 3)"	"intron (NM_002900, intron 2 of 3)"	6569	NM_002900	5949	Hs.591928	NM_002900	ENSG00000265203	RBP3	D10S64|D10S65|D10S66|IRBP|RBPI|RP66	retinol binding protein 3	protein-coding	37.76	5.82	6.487972509	1.70E-14
chr10-1489	chr10	50421207	50422207	+	16.6	1000	Intergenic	Intergenic	-25262	NM_001288742	170371	Hs.385493	NM_001010863	ENSG00000204161	C10orf128	-	chromosome 10 open reading frame 128	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr10-149	chr10	3035315	3036315	+	23	1000	Intergenic	Intergenic	-73897	NM_002627	5214	Hs.26010	NM_002627	ENSG00000067057	PFKP	ATP-PFK|PFK-C|PFK-P|PFKF	"phosphofructokinase, platelet"	protein-coding	23.04	1.46	15.78082192	5.41E-16
chr10-1491	chr10	59830114	59831114	+	16.6	1000	Intergenic	Intergenic	197080	NM_152230	253430	Hs.30280	NM_152230	ENSG00000151151	IPMK	-	inositol polyphosphate multikinase	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr10-1492	chr10	61815905	61816905	+	17.3	1000	"intron (NM_001204404, intron 41 of 43)"	"intron (NM_001204404, intron 41 of 43)"	84369	NM_001149	288	Hs.499725	NM_001149	ENSG00000151150	ANK3	ANKYRIN-G|MRT37	ankyrin 3	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr10-1493	chr10	61852488	61853488	+	16	1000	"intron (NM_001204404, intron 29 of 43)"	"intron (NM_001204404, intron 29 of 43)"	47786	NM_001149	288	Hs.499725	NM_001149	ENSG00000151150	ANK3	ANKYRIN-G|MRT37	ankyrin 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr10-1494	chr10	64574729	64575983	+	19.8	1254	"intron (NM_001136177, intron 2 of 2)"	CpG	784	NM_001136179	1959	Hs.1395	NM_000399	ENSG00000122877	EGR2	AT591|CMT1D|CMT4E|KROX20	early growth response 2	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr10-1495	chr10	64766815	64767815	+	16.6	1000	Intergenic	Intergenic	-125692	NM_001282405	29982	Hs.449628	NM_030759	ENSG00000148572	NRBF2	COPR|COPR1|COPR2|NRBF-2	nuclear receptor binding factor 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr10-1496	chr10	69368919	69372254	+	53.8	3335	"intron (NM_001127384, intron 2 of 17)"	"intron (NM_001127384, intron 2 of 17)"	54857	NM_001127384	29119	Hs.21375	NM_013266	ENSG00000183230	CTNNA3	ARVD13|VR22	catenin alpha 3	protein-coding	53.77	12.13	4.432811212	7.36E-15
chr10-1500	chr10	71375322	71377544	+	32.6	2222	Intergenic	LTR78|LTR|ERV1	-13570	NM_145306	219738	Hs.522992	NM_145306	ENSG00000171224	C10orf35	-	chromosome 10 open reading frame 35	protein-coding	32.64	2.43	13.43209877	9.19E-20
chr10-1502	chr10	71425652	71427199	+	25.6	1547	Intergenic	MamGypLTR1c|LTR|Gypsy	36422	NM_145306	219738	Hs.522992	NM_145306	ENSG00000171224	C10orf35	-	chromosome 10 open reading frame 35	protein-coding	25.6	1.94	13.19587629	4.03E-16
chr10-1513	chr10	72787634	72788634	+	16.6	1000	Intergenic	L1ME3E|LINE|L1	89324	NR_134313	105378349	Hs.119164	NR_134313	ENSG00000259267	LOC105378349	-	uncharacterized LOC105378349	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr10-1523	chr10	73299849	73300849	+	16.6	1000	"intron (NM_052836, intron 6 of 12)"	"intron (NM_052836, intron 6 of 12)"	-28672	NR_120672	102723377	Hs.568789	NR_120672	ENSG00000223817	CDH23-AS1	C10orf106|NCRNA00223|bA327E2.3	CDH23 antisense RNA 1	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr10-1525	chr10	73320641	73322729	+	33.3	2088	"intron (NM_052836, intron 6 of 12)"	"intron (NM_052836, intron 6 of 12)"	-50008	NR_120672	102723377	Hs.568789	NR_120672	ENSG00000223817	CDH23-AS1	C10orf106|NCRNA00223|bA327E2.3	CDH23 antisense RNA 1	ncRNA	33.28	5.82	5.718213058	4.04E-12
chr10-1527	chr10	73395736	73396736	+	17.3	1000	"intron (NM_052836, intron 11 of 12)"	AluJo|SINE|Alu	83342	NM_001164375	414152	Hs.568788	NM_001164375	ENSG00000214688	C10orf105	-	chromosome 10 open reading frame 105	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr10-1530	chr10	77106830	77107830	+	16	1000	"intron (NR_038226, intron 2 of 3)"	"intron (NR_038226, intron 2 of 3)"	51189	NR_038226	253264	Hs.662111	NR_038223	ENSG00000226051	ZNF503-AS1	-	ZNF503 antisense RNA 1	ncRNA	16	0.97	16.49484536	3.54E-11
chr10-1532	chr10	79148149	79149149	+	16.6	1000	"intron (NM_001271518, intron 1 of 27)"	"intron (NM_001271518, intron 1 of 27)"	38019	NR_126365	101929286	Hs.568867	NR_126365		KCNMA1-AS3	-	KCNMA1 antisense RNA 3	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr10-1534	chr10	79367491	79368491	+	17.3	1000	"intron (NM_001322832, intron 1 of 27)"	AluJb|SINE|Alu	29586	NM_001322837	3778	Hs.144795	NM_002247	ENSG00000156113	KCNMA1	BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1	potassium calcium-activated channel subfamily M alpha 1	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr10-1536	chr10	80210319	80211319	+	16.6	1000	Intergenic	Intergenic	183734	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA	16.64	0	17.14115603	3.68E-16
chr10-1542	chr10	80738987	80739987	+	16.6	1000	"intron (NR_015429, intron 3 of 7)"	MIR3|SINE|MIR	87718	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr10-1547	chr10	81162824	81165562	+	44.2	2738	"intron (NM_153367, intron 2 of 3)"	"intron (NM_153367, intron 2 of 3)"	41190	NM_153367	219654	Hs.523080	NM_153367	ENSG00000165424	ZCCHC24	C10orf56|Z3CXXC8	zinc finger CCHC-type containing 24	protein-coding	44.17	6.8	6.495588235	8.79E-17
chr10-1549	chr10	81741158	81742158	+	16	1000	Intergenic	CpG	-32797	NM_003019	6441	Hs.253495	NM_003019	ENSG00000133661	SFTPD	COLEC7|PSP-D|SFTP4|SP-D	surfactant protein D	protein-coding	16	0	16.4818808	1.26E-14
chr10-1552	chr10	86001423	86003121	+	26.9	1698	Intergenic	Intergenic	-1055	NM_015613	26103	Hs.226000	NM_015613	ENSG00000148602	LRIT1	FIGLER9|LRRC21|PAL	"leucine rich repeat, Ig-like and transmembrane domains 1"	protein-coding	26.88	4.85	5.542268041	7.61E-10
chr10-1558	chr10	91067677	91069499	+	35.2	1822	"3' UTR (NM_001547, exon 2 of 2)"	"3' UTR (NM_001547, exon 2 of 2)"	6882	NM_001547	3433	Hs.437609	NM_001547	ENSG00000119922	IFIT2	G10P2|GARG-39|IFI-54|IFI-54K|IFI54|IFIT-2|ISG-54 K|ISG-54K|ISG54|P54|cig42	interferon induced protein with tetratricopeptide repeats 2	protein-coding	35.2	6.31	5.57844691	4.08E-12
chr10-156	chr10	22729540	22731043	+	26.9	1503	Intergenic	Intergenic	-3433	NR_036533	100499489	Hs.7444	NR_036533		LOC100499489	-	uncharacterized LOC100499489	ncRNA	26.88	6.31	4.259904913	6.42E-08
chr10-1560	chr10	91567021	91568021	+	17.3	1000	Intergenic	Intergenic	-21729	NR_038382	643529	Hs.618956	NR_038382	ENSG00000232229	LINC00865	-	long intergenic non-protein coding RNA 865	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr10-1561	chr10	92545567	92546567	+	16.6	1000	"intron (NM_000872, intron 1 of 2)"	"intron (NM_000872, intron 1 of 2)"	71604	NM_000872	3363	Hs.73739	NM_000872	ENSG00000148680	HTR7	5-HT7	5-hydroxytryptamine receptor 7	protein-coding	16.64	0.49	33.95918367	3.68E-16
chr10-1562	chr10	92878342	92879342	+	16	1000	Intergenic	L2a|LINE|L2	33995	NR_002779	119369	Hs.441287	NR_002779		NUDT9P1	C10orf98|bA56M3.1	nudix hydrolase 9 pseudogene 1	pseudo	16	3.88	4.12371134	7.91E-05
chr10-1563	chr10	93360692	93361692	+	17.3	1000	"intron (NR_024467, intron 1 of 4)"	MIRb|SINE|MIR	10025	NR_024467	100188947	Hs.535293	NR_024467		HECTD2-AS1	-	HECTD2 antisense RNA 1	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr10-1564	chr10	93459162	93460162	+	16.6	1000	Intergenic	L2b|LINE|L2	-66804	NM_005398	5507	Hs.303090	NM_005398	ENSG00000119938	PPP1R3C	PPP1R5|PTG	protein phosphatase 1 regulatory subunit 3C	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr10-1569	chr10	95348121	95349412	+	20.5	1291	"3' UTR (NM_001195755, exon 3 of 3)"	"3' UTR (NM_001195755, exon 3 of 3)"	12227	NM_006744	5950	Hs.50223	NM_006744	ENSG00000138207	RBP4	MCOPCB10|RDCCAS	retinol binding protein 4	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr10-1570	chr10	95760575	95761575	+	16	1000	"intron (NM_016341, intron 1 of 32)"	"intron (NM_016341, intron 1 of 32)"	7329	NM_001288989	51196	Hs.655033	NM_016341	ENSG00000138193	PLCE1	NPHS3|PLCE|PPLC	phospholipase C epsilon 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr10-1573	chr10	99469633	99472374	+	34.6	2741	Intergenic	AluSz|SINE|Alu	-2462	NM_031484	83742	Hs.744073	NM_031484	ENSG00000155254	MARVELD1	GB14|MARVD1|MRVLDC1|bA548K23.8	MARVEL domain containing 1	protein-coding	34.56	5.82	5.93814433	6.75E-13
chr10-1574	chr10	99531725	99532725	+	16.6	1000	promoter-TSS (NM_003015)	promoter-TSS (NM_003015)	-469	NM_003015	6425	Hs.279565	NM_003015	ENSG00000120057	SFRP5	SARP3	secreted frizzled related protein 5	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr10-1577	chr10	99661190	99662983	+	26.2	1793	"intron (NM_018058, intron 7 of 14)"	"intron (NM_018058, intron 7 of 14)"	52091	NM_001010917	401647	Hs.567524	NM_001010917	ENSG00000155265	GOLGA7B	C10orf132|C10orf133|bA451M19.3|bA459F3.4	golgin A7 family member B	protein-coding	26.24	3.88	6.762886598	1.00E-10
chr10-1578	chr10	99685301	99690349	+	73.6	5048	"intron (NM_018058, intron 3 of 14)"	"intron (NM_018058, intron 3 of 14)"	77830	NM_001010917	401647	Hs.567524	NM_001010917	ENSG00000155265	GOLGA7B	C10orf132|C10orf133|bA451M19.3|bA459F3.4	golgin A7 family member B	protein-coding	73.61	15.05	4.8910299	2.43E-21
chr10-1585	chr10	101121642	101123634	+	34.6	1992	"intron (NR_144311, intron 4 of 10)"	L3|LINE|CR1	33782	NM_001345889	26507	Hs.274579	NM_020348	ENSG00000119946	CNNM1	ACDP1|CLP-1	cyclin and CBS domain divalent metal cation transport mediator 1	protein-coding	34.56	2.91	11.87628866	4.47E-20
chr10-1588	chr10	102078905	102080364	+	22.4	1459	"intron (NM_016112, intron 2 of 15)"	"intron (NM_016112, intron 2 of 15)"	10609	NM_001253837	9033	Hs.159241	NM_016112	ENSG00000107593	PKD2L1	PCL|PKD2L|PKDL|TRPP3	"polycystin 2 like 1, transient receptor potential cation channel"	protein-coding	22.4	2.43	9.218106996	2.49E-11
chr10-159	chr10	47130814	47132361	+	32	1547	"intron (NR_033957, intron 1 of 3)"	"intron (NR_033957, intron 1 of 3)"	2249	NR_003277	728643	Hs.711067	NR_003277	ENSG00000213412	HNRNPA1P33	-	heterogeneous nuclear ribonucleoprotein A1 pseudogene 33	pseudo	32	7.77	4.118404118	7.28E-09
chr10-1601	chr10	102835309	102836309	+	17.3	1000	Intergenic	Intergenic	9753	NR_135068	81621	Hs.534859	NM_030929	ENSG00000107821	KAZALD1	BONO1|FKSG28|FKSG40|IGFBP-rP10	Kazal type serine peptidase inhibitor domain 1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr10-1602	chr10	102875819	102876819	+	16.6	1000	"intron (NR_130724, intron 2 of 2)"	AluJb|SINE|Alu	14584	NR_130723	100038246	Hs.368784	NM_001085398	ENSG00000236311	TLX1NB	APT-B7|TD1|TDI	TLX1 neighbor	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr10-1606	chr10	102970376	102972536	+	37.1	2160	Intergenic	MER5A|DNA|hAT-Charlie	17261	NM_006562	10660	Hs.37128	NM_006562	ENSG00000138136	LBX1	HPX-6|HPX6|LBX1H|homeobox	ladybird homeobox 1	protein-coding	37.12	7.28	5.098901099	3.68E-12
chr10-161	chr10	50482891	50484453	+	29.4	1562	Intergenic	Intergenic	23266	NR_108038	100506769	Hs.562293	NR_108038		C10orf71-AS1	-	C10orf71 antisense RNA 1	ncRNA	29.44	2.91	10.11683849	7.13E-16
chr10-1613	chr10	105251894	105255998	+	68.5	4104	"5' UTR (NM_004210, exon 1 of 6)"	"5' UTR (NM_004210, exon 1 of 6)"	211	NM_004210	9148	Hs.594708	NM_004210	ENSG00000107954	NEURL1	NEUR1|NEURL|RNF67|bA416N2.1|neu|neu-1	neuralized E3 ubiquitin protein ligase 1	protein-coding	68.49	11.16	6.137096774	3.21E-24
chr10-1616	chr10	105316652	105317652	+	14.7	1000	"intron (NM_004210, intron 1 of 5)"	"intron (NM_004210, intron 1 of 5)"	-39953	NR_120675	102724341	Hs.599425	NR_120675	ENSG00000235470	NEURL1-AS1	-	NEURL1 antisense RNA 1	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr10-1622	chr10	106041955	106042955	+	16	1000	"intron (NM_001191014, intron 3 of 4)"	"intron (NM_001191014, intron 3 of 4)"	7568	NM_001191015	119391	Hs.107384	NM_183239	ENSG00000065621	GSTO2	GSTO 2-2|bA127L20.1	glutathione S-transferase omega 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr10-1623	chr10	106498175	106499175	+	16.6	1000	"intron (NM_014978, intron 1 of 26)"	"intron (NM_014978, intron 1 of 26)"	-72701	NR_104028	100505890	Hs.348526	NR_104028	ENSG00000226387	SORCS3-AS1	-	SORCS3 antisense RNA 1	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr10-1624	chr10	111214024	111215024	+	16.6	1000	Intergenic	MIRc|SINE|MIR	468480	NM_001324136	7511	Hs.390623	NM_020383	ENSG00000108039	XPNPEP1	APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1	X-prolyl aminopeptidase 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr10-1628	chr10	112311876	112312876	+	16	1000	Intergenic	THE1B|LTR|ERVL-MaLR	-15073	NM_005445	9126	Hs.24485	NM_005445	ENSG00000108055	SMC3	BAM|BMH|CDLS3|CSPG6|HCAP|SMC3L1	structural maintenance of chromosomes 3	protein-coding	16	1.94	8.24742268	7.67E-08
chr10-1629	chr10	112441365	112442738	+	24.3	1373	"intron (NM_001134363, intron 1 of 13)"	L1MC4a|LINE|L1	37896	NM_001134363	282996	Hs.116630	NM_001134363	ENSG00000203867	RBM20	-	RNA binding motif protein 20	protein-coding	24.32	1.94	12.53608247	5.33E-15
chr10-1633	chr10	115032499	115034231	+	21.8	1732	Intergenic	Intergenic	228251	NR_132769	106635520		NR_132769		SNORA87	-	"small nucleolar RNA, H/ACA box 87"	snoRNA	21.76	4.85	4.486597938	5.54E-07
chr10-1641	chr10	115753506	115754506	+	17.3	1000	Intergenic	Intergenic	-49800	NM_000684	153	Hs.99913	NM_000684	ENSG00000043591	ADRB1	ADRB1R|B1AR|BETA1AR|RHR	adrenoceptor beta 1	protein-coding	17.28	0	17.80043126	3.68E-16
chr10-1644	chr10	115793105	115794105	+	16.6	1000	Intergenic	Tigger15a|DNA|TcMar-Tigger	-10201	NM_000684	153	Hs.99913	NM_000684	ENSG00000043591	ADRB1	ADRB1R|B1AR|BETA1AR|RHR	adrenoceptor beta 1	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr10-1646	chr10	115858102	115859935	+	30.1	1833	Intergenic	AluSx1|SINE|Alu	55212	NM_000684	153	Hs.99913	NM_000684	ENSG00000043591	ADRB1	ADRB1R|B1AR|BETA1AR|RHR	adrenoceptor beta 1	protein-coding	30.08	3.88	7.75257732	2.58E-13
chr10-1654	chr10	119257812	119258812	+	16.6	1000	"intron (NR_002791, intron 2 of 3)"	MER33|DNA|hAT-Charlie	-43644	NM_001165924	2018	Hs.202095	NM_004098	ENSG00000170370	EMX2	-	empty spiracles homeobox 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr10-1658	chr10	119554694	119555694	+	16	1000	Intergenic	Intergenic	-250615	NR_002791	196047	Hs.312592	NR_002791	ENSG00000229847	EMX2OS	EMX2-AS1|NCRNA00045	EMX2 opposite strand/antisense RNA	ncRNA	16	2.43	6.58436214	7.90E-07
chr10-1665	chr10	120771908	120772908	+	16.6	1000	Intergenic	L1ME1|LINE|L1	-16820	NM_199461	340719	Hs.591918	NM_199461	ENSG00000188613	NANOS1	EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A	nanos C2HC-type zinc finger 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr10-1668	chr10	123247307	123248569	+	21.1	1262	"intron (NM_001144918, intron 11 of 15)"	AluSz6|SINE|Alu	42890	NM_001320654	2263	Hs.533683	NM_000141	ENSG00000066468	FGFR2	BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25	fibroblast growth factor receptor 2	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr10-1672	chr10	124867928	124870125	+	41	2197	Intergenic	MamRep137|DNA|TcMar?	-26541	NM_001105574	340784	Hs.531194	NM_001105574	ENSG00000188620	HMX3	NKX-5.1|NKX5.1|Nkx5-1	H6 family homeobox 3	protein-coding	40.97	8.74	4.687643021	2.55E-12
chr10-1677	chr10	125949355	125951709	+	33.3	2354	Intergenic	Intergenic	-97409	NM_001270765	51363	Hs.287537	NM_014863	ENSG00000182022	CHST15	BRAG|GALNAC4S-6ST	carbohydrate sulfotransferase 15	protein-coding	33.28	4.37	7.615560641	6.77E-15
chr10-1687	chr10	128973562	128974562	+	16	1000	"exon (NM_001039762, exon 4 of 6)"	"exon (NM_001039762, exon 4 of 6)"	20360	NM_001039762	642938	Hs.613882	NM_001039762	ENSG00000188916	FAM196A	C10orf141|INSYN2	family with sequence similarity 196 member A	protein-coding	16	3.88	4.12371134	7.91E-05
chr10-1690	chr10	129156089	129157350	+	19.8	1261	"intron (NM_001380, intron 32 of 51)"	"intron (NM_001380, intron 32 of 51)"	-162297	NM_001039762	642938	Hs.613882	NM_001039762	ENSG00000188916	FAM196A	C10orf141|INSYN2	family with sequence similarity 196 member A	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr10-1691	chr10	129336932	129338410	+	23.7	1478	Intergenic	AluSc8|SINE|Alu	-9942	NM_001030013	594857	Hs.643423	NM_001030013	ENSG00000214285	NPS	-	neuropeptide S	protein-coding	23.68	0.97	24.41237113	5.03E-19
chr10-1697	chr10	130330864	130334652	+	55.7	3788	Intergenic	Intergenic	248544	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	55.69	10.68	5.214419476	2.00E-17
chr10-1702	chr10	130738304	130739304	+	16.6	1000	Intergenic	Intergenic	-526644	NM_002412	4255	Hs.501522	NM_002412	ENSG00000170430	MGMT	-	O-6-methylguanine-DNA methyltransferase	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr10-1703	chr10	130765911	130767169	+	19.8	1258	Intergenic	Intergenic	-498908	NM_002412	4255	Hs.501522	NM_002412	ENSG00000170430	MGMT	-	O-6-methylguanine-DNA methyltransferase	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr10-1706	chr10	131111445	131112445	+	17.3	1000	Intergenic	Intergenic	-153503	NM_002412	4255	Hs.501522	NM_002412	ENSG00000170430	MGMT	-	O-6-methylguanine-DNA methyltransferase	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr10-171	chr10	95240320	95242444	+	40.3	2124	"intron (NM_013451, intron 1 of 53)"	"intron (NM_013451, intron 1 of 53)"	692	NM_133337	26509	Hs.602086	NM_013451	ENSG00000138119	MYOF	FER1L3	myoferlin	protein-coding	40.33	3.88	10.3943299	5.62E-21
chr10-1710	chr10	131801587	131802587	+	16	1000	Intergenic	Intergenic	-39996	NM_001005463	253738	Hs.591374	NM_001005463	ENSG00000108001	EBF3	COE3|EBF-3|O/E-2|OE-2	early B-cell factor 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr10-1712	chr10	133236217	133237745	+	23	1528	Intergenic	Intergenic	-126997	NM_174937	256536	Hs.126575	NM_174937	ENSG00000176769	TCERG1L	-	transcription elongation regulator 1 like	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr10-1717	chr10	134211865	134212865	+	16	1000	"intron (NM_138499, intron 1 of 2)"	"intron (NM_138499, intron 1 of 2)"	1663	NM_001098637	170394	Hs.527751	NM_138499	ENSG00000171813	PWWP2B	PWWP2|bA432J24.1|pp8607	PWWP domain containing 2B	protein-coding	16	2.91	5.498281787	4.98E-06
chr10-1720	chr10	134740926	134742490	+	26.2	1564	"intron (NM_001200049, intron 9 of 57)"	MIR|SINE|MIR	14381	NM_001200049	54777	Hs.298038	NM_017609	ENSG00000171811	CFAP46	C10orf123|C10orf124|C10orf92|C10orf93|TTC40|bA288G11.4|bA288G11.5|bB137A17.2|bB137A17.3	cilia and flagella associated protein 46	protein-coding	26.24	1.94	13.5257732	4.03E-16
chr10-1721	chr10	134837618	134840822	+	49.3	3204	Intergenic	Intergenic	60182	NR_046231	399829	Hs.252872	NR_046231	ENSG00000240707	LINC01168	-	long intergenic non-protein coding RNA 1168	ncRNA	49.29	7.77	6.343629344	2.96E-18
chr10-1726	chr10	468398	469398	+	16	1000	"exon (NM_014974, exon 5 of 37)"	"exon (NM_014974, exon 5 of 37)"	-140872	NR_106988	102465753		NR_106988	ENSG00000280494	MIR7641-2	B-ATF|hsa-mir-7641-2	microRNA 7641-2	ncRNA	16	2.91	5.498281787	4.98E-06
chr10-1729	chr10	532354	533354	+	15.4	1000	"intron (NM_014974, intron 1 of 36)"	"intron (NM_014974, intron 1 of 36)"	154864	NR_049884	100847086		NR_049884	ENSG00000263511	MIR5699	mir-5699	microRNA 5699	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr10-1732	chr10	696527	697916	+	18.6	1389	"non-coding (NR_027151, exon 3 of 3)"	"non-coding (NR_027151, exon 3 of 3)"	1204	NR_027152	414235	Hs.587103	NM_001012714	ENSG00000180525	PRR26	C10orf108	proline rich 26	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr10-1734	chr10	1229105	1230385	+	21.8	1280	"intron (NM_018702, intron 9 of 9)"	"intron (NM_018702, intron 9 of 9)"	24037	NR_015376	399706	Hs.721191	NM_001010910	ENSG00000229205	LINC00200	C10orf139|NCRNA00200	long intergenic non-protein coding RNA 200	ncRNA	21.76	2.91	7.47766323	3.87E-10
chr10-1736	chr10	1338005	1340600	+	41.6	2595	"intron (NM_018702, intron 3 of 9)"	MLT1C|LTR|ERVL-MaLR	133594	NR_015376	399706	Hs.721191	NM_001010910	ENSG00000229205	LINC00200	C10orf139|NCRNA00200	long intergenic non-protein coding RNA 200	ncRNA	41.61	5.82	7.149484536	5.30E-17
chr10-1737	chr10	1444988	1448228	+	48	3240	"intron (NM_018702, intron 1 of 9)"	"intron (NM_018702, intron 1 of 9)"	-122217	NR_033387	642394	Hs.568831	NM_001098830	ENSG00000205696	ADARB2-AS1	C10orf109|NCRNA00168|bA466B20.1	ADARB2 antisense RNA 1	ncRNA	48.01	9.71	4.94438723	1.65E-14
chr10-1740	chr10	1652396	1653396	+	13.4	1000	"intron (NM_018702, intron 1 of 9)"	"intron (NM_018702, intron 1 of 9)"	84071	NR_033387	642394	Hs.568831	NM_001098830	ENSG00000205696	ADARB2-AS1	C10orf109|NCRNA00168|bA466B20.1	ADARB2 antisense RNA 1	ncRNA	13.44	2.43	5.530864198	2.99E-05
chr10-1742	chr10	1877025	1878025	+	16	1000	Intergenic	L2b|LINE|L2	-97855	NM_018702	105	Hs.586663	NM_018702	ENSG00000185736	ADARB2	ADAR3|RED2	"adenosine deaminase, RNA specific B2 (inactive)"	protein-coding	16	2.43	6.58436214	7.90E-07
chr10-1743	chr10	2128266	2129266	+	16	1000	Intergenic	Intergenic	-10483	NR_106720	102465944		NR_106720	ENSG00000278069	MIR6072	hsa-mir-6072	microRNA 6072	ncRNA	16	2.43	6.58436214	7.90E-07
chr10-1745	chr10	3030271	3031271	+	16.6	1000	Intergenic	Intergenic	-78941	NM_002627	5214	Hs.26010	NM_002627	ENSG00000067057	PFKP	ATP-PFK|PFK-C|PFK-P|PFKF	"phosphofructokinase, platelet"	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr10-1748	chr10	3248938	3249938	+	16	1000	Intergenic	Intergenic	-34405	NR_144639	10531	Hs.528300	NM_014889	ENSG00000107959	PITRM1	MP1|PreP	pitrilysin metallopeptidase 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr10-175	chr10	102881159	102890351	+	138.3	9192	"intron (NR_130724, intron 2 of 2)"	"intron (NR_130724, intron 2 of 2)"	5148	NR_130723	100038246	Hs.368784	NM_001085398	ENSG00000236311	TLX1NB	APT-B7|TD1|TDI	TLX1 neighbor	ncRNA	138.26	29.61	4.669368457	1.84E-37
chr10-1751	chr10	3380706	3381706	+	15.4	1000	"intron (NR_131187, intron 1 of 1)"	MER33|DNA|hAT-Charlie	20319	NR_131187	105376360	Hs.212226	NR_131187		LOC105376360	-	uncharacterized LOC105376360	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr10-1753	chr10	4034978	4035978	+	16.6	1000	Intergenic	Intergenic	2126	NR_106726	102464829		NR_106726	ENSG00000274809	MIR6078	hsa-mir-6078	microRNA 6078	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr10-1755	chr10	4660265	4661265	+	15.4	1000	Intergenic	Intergenic	-37583	NR_015425	338588	Hs.121365	NR_015425		LINC00705	-	long intergenic non-protein coding RNA 705	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr10-1758	chr10	5571870	5573537	+	26.9	1667	Intergenic	Intergenic	-4494	NR_120497	100132159	Hs.239600	NR_120496		CALML3-AS1	-	CALML3 antisense RNA 1	ncRNA	26.88	3.88	6.927835052	1.44E-11
chr10-1760	chr10	6020091	6022600	+	44.2	2509	Intergenic	L1MC|LINE|L1	-1195	NM_001243539	3601	Hs.445124	NM_002189	ENSG00000134470	IL15RA	CD215	interleukin 15 receptor subunit alpha	protein-coding	44.17	8.74	5.053775744	1.04E-13
chr10-1761	chr10	6077216	6078653	+	24.3	1437	"intron (NM_001308242, intron 1 of 6)"	"intron (NM_001308242, intron 1 of 6)"	26399	NM_001308243	3559	Hs.231367	NM_000417	ENSG00000134460	IL2RA	CD25|IDDM10|IL2R|IMD41|TCGFR|p55	interleukin 2 receptor subunit alpha	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr10-1762	chr10	6105065	6106607	+	24.3	1542	Intergenic	AT_rich|Low_complexity|Low_complexity	-1503	NM_001308242	3559	Hs.231367	NM_000417	ENSG00000134460	IL2RA	CD25|IDDM10|IL2R|IMD41|TCGFR|p55	interleukin 2 receptor subunit alpha	protein-coding	24.32	1.94	12.53608247	5.33E-15
chr10-1763	chr10	6116045	6117304	+	17.3	1259	Intergenic	L2a|LINE|L2	-12341	NM_001308242	3559	Hs.231367	NM_000417	ENSG00000134460	IL2RA	CD25|IDDM10|IL2R|IMD41|TCGFR|p55	interleukin 2 receptor subunit alpha	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr10-1766	chr10	6796666	6797666	+	16	1000	Intergenic	Intergenic	17822	NR_138480	108570035	Hs.568834	NR_138480		LINP1	-	lncRNA in nonhomologous end joining pathway 1	ncRNA	16	3.4	4.705882353	2.25E-05
chr10-1772	chr10	9708768	9709768	+	16	1000	Intergenic	Intergenic	-371712	NR_120635	101928272	Hs.650697	NR_120635		LOC101928272	-	uncharacterized LOC101928272	ncRNA	16	1.94	8.24742268	7.67E-08
chr10-1773	chr10	10814193	10815193	+	16.6	1000	"intron (NM_001326319, intron 2 of 16)"	"intron (NM_001326319, intron 2 of 16)"	22184	NR_027082	207107	Hs.31562	NR_027082	ENSG00000225383	SFTA1P	SFTPF	"surfactant associated 1, pseudogene"	pseudo	16.64	3.88	4.288659794	1.81E-05
chr10-1774	chr10	11008021	11009021	+	16	1000	"intron (NM_001326319, intron 4 of 16)"	"intron (NM_001326319, intron 4 of 16)"	-14395	NR_015413	254312	Hs.498620	NR_015413	ENSG00000229240	LINC00710	-	long intergenic non-protein coding RNA 710	ncRNA	16	3.88	4.12371134	7.91E-05
chr10-1775	chr10	11745294	11746567	+	19.2	1273	Intergenic	AluSg7|SINE|Alu	-38426	NM_024693	79746	Hs.22242	NM_024693	ENSG00000134463	ECHDC3	-	enoyl-CoA hydratase domain containing 3	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr10-1776	chr10	11787177	11788177	+	16	1000	"intron (NM_024693, intron 1 of 4)"	"intron (NM_024693, intron 1 of 4)"	3321	NM_024693	79746	Hs.22242	NM_024693	ENSG00000134463	ECHDC3	-	enoyl-CoA hydratase domain containing 3	protein-coding	16	1.94	8.24742268	7.67E-08
chr10-178	chr10	111927779	111931302	+	59.5	3523	Intergenic	Intergenic	-37823	NM_130439	4601	Hs.602078	NM_005962	ENSG00000119950	MXI1	MAD2|MXD2|MXI|bHLHc11	"MAX interactor 1, dimerization protein"	protein-coding	59.53	9.71	6.130792997	3.28E-21
chr10-1781	chr10	13460357	13461707	+	19.2	1350	Intergenic	Intergenic	-70734	NM_012247	22929	Hs.124027	NM_012247	ENSG00000086475	SEPHS1	SELD|SPS|SPS1	selenophosphate synthetase 1	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr10-1782	chr10	13508495	13510463	+	29.4	1968	"intron (NM_001100912, intron 5 of 7)"	"intron (NM_001100912, intron 5 of 7)"	35497	NM_001100912	222389	Hs.498740	NM_152751	ENSG00000165626	BEND7	C10orf30	BEN domain containing 7	protein-coding	29.44	5.82	5.058419244	6.85E-10
chr10-1783	chr10	13532636	13533636	+	14.7	1000	"intron (NM_001100912, intron 4 of 7)"	"intron (NM_001100912, intron 4 of 7)"	11840	NM_001100912	222389	Hs.498740	NM_152751	ENSG00000165626	BEND7	C10orf30	BEN domain containing 7	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-1789	chr10	13964161	13965821	+	23	1660	"intron (NM_018027, intron 2 of 24)"	"intron (NM_018027, intron 2 of 24)"	49378	NM_001318337	55691	Hs.330463	NM_018027	ENSG00000151474	FRMD4A	CCAFCA|FRMD4|bA295P9.4	FERM domain containing 4A	protein-coding	23.04	3.4	6.776470588	5.45E-10
chr10-1792	chr10	14710429	14711429	+	16	1000	"intron (NM_031453, intron 1 of 4)"	"intron (NM_031453, intron 1 of 4)"	-64512	NM_001282696	83641	Hs.446315	NM_031453	ENSG00000065809	FAM107B	C10orf45|HITS	family with sequence similarity 107 member B	protein-coding	16	2.91	5.498281787	4.98E-06
chr10-1793	chr10	15335639	15336639	+	16.6	1000	"intron (NM_001010924, intron 1 of 7)"	MLT1N2|LTR|ERVL-MaLR	76919	NM_001010924	221061	Hs.66762	NM_001010924	ENSG00000148468	FAM171A1	C10orf38	family with sequence similarity 171 member A1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr10-1796	chr10	16338573	16339573	+	16	1000	Intergenic	GA-rich|Low_complexity|Low_complexity	-139869	NM_001261837	9317	Hs.444321	NM_030664	ENSG00000165983	PTER	HPHRP|RPR-1	phosphotriesterase related	protein-coding	16	3.88	4.12371134	7.91E-05
chr10-1798	chr10	21462073	21464183	+	31.4	2110	promoter-TSS (NM_213569)	promoter-TSS (NM_213569)	-12	NM_001173484	10529	Hs.5025	NM_006393	ENSG00000078114	NEBL	LASP2|LNEBL	nebulette	protein-coding	31.36	2.91	10.7766323	6.73E-17
chr10-1799	chr10	22604000	22605000	+	16.6	1000	promoter-TSS (NM_001204062)	promoter-TSS (NM_001204062)	-812	NM_012071	23412	Hs.534398	NM_012071	ENSG00000148444	COMMD3	BUP|C10orf8	COMM domain containing 3	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr10-1808	chr10	28031543	28032543	+	16	1000	"intron (NM_173576, intron 2 of 6)"	CpG-2675	-1501	NR_121652	101929202	Hs.568843	NR_121652		MKX-AS1	-	MKX antisense RNA 1	ncRNA	16	0	16.4818808	1.26E-14
chr10-1809	chr10	29099588	29100588	+	14.1	1000	Intergenic	L4|LINE|RTE	-15109	NR_038375	100507605	Hs.119207	NR_038374	ENSG00000235824	LINC00837	-	long intergenic non-protein coding RNA 837	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr10-181	chr10	115852312	115853838	+	31.4	1526	Intergenic	L1MD3|LINE|L1	49269	NM_000684	153	Hs.99913	NM_000684	ENSG00000043591	ADRB1	ADRB1R|B1AR|BETA1AR|RHR	adrenoceptor beta 1	protein-coding	31.36	1.94	16.16494845	8.26E-21
chr10-1813	chr10	30471725	30472725	+	16	1000	Intergenic	Intergenic	-28556	NR_120653	101929279	Hs.559153	NR_120653		LOC101929279	-	uncharacterized LOC101929279	ncRNA	16	0.97	16.49484536	3.54E-11
chr10-1816	chr10	32045965	32046965	+	15.4	1000	Intergenic	Intergenic	151389	NM_001270699	94134	Hs.499264	NM_018287	ENSG00000165322	ARHGAP12	-	Rho GTPase activating protein 12	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-1817	chr10	33577114	33578114	+	16.6	1000	"intron (NM_001024628, intron 2 of 11)"	"intron (NM_001024628, intron 2 of 11)"	46219	NM_001330068	8829	Hs.131704	NM_003873	ENSG00000099250	NRP1	BDCA4|CD304|NP1|NRP|VEGF165R	neuropilin 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr10-1819	chr10	33826849	33827849	+	16	1000	Intergenic	Intergenic	-203516	NM_001244973	8829	Hs.131704	NM_003873	ENSG00000099250	NRP1	BDCA4|CD304|NP1|NRP|VEGF165R	neuropilin 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr10-1820	chr10	33835767	33837300	+	23	1533	Intergenic	Intergenic	-212700	NM_001244973	8829	Hs.131704	NM_003873	ENSG00000099250	NRP1	BDCA4|CD304|NP1|NRP|VEGF165R	neuropilin 1	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr10-1831	chr10	43548240	43549521	+	20.5	1281	Intergenic	L1MC4|LINE|L1	-23637	NM_020630	5979	Hs.350321	NM_000323	ENSG00000165731	RET	CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1|RET51	ret proto-oncogene	protein-coding	20.48	2.43	8.427983539	2.25E-10
chr10-1833	chr10	43564360	43565758	+	21.8	1398	Intergenic	Intergenic	-7458	NM_020630	5979	Hs.350321	NM_000323	ENSG00000165731	RET	CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1|RET51	ret proto-oncogene	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr10-1834	chr10	43587845	43588845	+	14.7	1000	"intron (NM_020630, intron 1 of 18)"	"intron (NM_020630, intron 1 of 18)"	15828	NM_020975	5979	Hs.350321	NM_000323	ENSG00000165731	RET	CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1|RET51	ret proto-oncogene	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr10-1837	chr10	43833768	43837426	+	58.2	3658	Intergenic	AluSx1|SINE|Alu	-31495	NM_001184963	53828	Hs.130497	NM_173160	ENSG00000150201	FXYD4	CHIF	FXYD domain containing ion transport regulator 4	protein-coding	58.25	11.65	5	1.67E-17
chr10-1839	chr10	44209804	44210804	+	16.6	1000	Intergenic	Intergenic	63969	NR_134484	102724264	Hs.140667	NR_134483	ENSG00000234973	LOC102724264	-	uncharacterized LOC102724264	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr10-1841	chr10	44334125	44335125	+	15.4	1000	Intergenic	MSTD-int|LTR|ERVL-MaLR	-6129	NR_033923	414260	Hs.351856	NR_033923	ENSG00000204187	LINC00619	C10orf136|bA168P8.1	long intergenic non-protein coding RNA 619	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr10-1847	chr10	45024703	45025703	+	16	1000	Intergenic	L1MB5|LINE|L1	-144658	NM_001033886	6387	Hs.522891	NM_000609	ENSG00000107562	CXCL12	IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1	C-X-C motif chemokine ligand 12	protein-coding	16	1.94	8.24742268	7.67E-08
chr10-1848	chr10	45170333	45171333	+	14.1	1000	Intergenic	MIR|SINE|MIR	-235931	NM_001123376	643236	Hs.292788	NM_001123376	ENSG00000187783	TMEM72	C10orf127|KSP37	transmembrane protein 72	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr10-1849	chr10	45350660	45351660	+	16	1000	"intron (NR_033842, intron 2 of 7)"	MIR3|SINE|MIR	-55604	NM_001123376	643236	Hs.292788	NM_001123376	ENSG00000187783	TMEM72	C10orf127|KSP37	transmembrane protein 72	protein-coding	16	3.88	4.12371134	7.91E-05
chr10-1850	chr10	45676086	45677086	+	14.7	1000	"intron (NR_033891, intron 6 of 7)"	"intron (NR_033891, intron 6 of 7)"	17124	NR_036112	100422988		NR_036112	ENSG00000263476	MIR3156-1	mir-3156-1	microRNA 3156-1	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr10-1853	chr10	45941717	45942717	+	16.6	1000	TTS (NM_001320862)	TTS (NM_001320862)	6352	NR_120674	102724323	Hs.559151	NR_120674	ENSG00000231964	LOC102724323	-	uncharacterized LOC102724323	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr10-1880	chr10	49891973	49892973	+	16.6	1000	Intergenic	Intergenic	-1045	NM_020945	57705	Hs.287379	NM_020945	ENSG00000283652	WDFY4	C10orf64	WDFY family member 4	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr10-1881	chr10	50000124	50002383	+	31.4	2259	"intron (NM_020945, intron 23 of 61)"	L2b|LINE|L2	107735	NM_020945	57705	Hs.287379	NM_020945	ENSG00000283652	WDFY4	C10orf64	WDFY family member 4	protein-coding	31.36	7.28	4.307692308	9.24E-09
chr10-1883	chr10	50822179	50824106	+	37.1	1927	"intron (NM_001142929, intron 1 of 14)"	"intron (NM_001142929, intron 1 of 14)"	1059	NM_020549	1103	Hs.302002	NM_020549	ENSG00000070748	CHAT	CHOACTASE|CMS1A|CMS1A2|CMS6	choline O-acetyltransferase	protein-coding	37.12	3.88	9.567010309	5.72E-19
chr10-1885	chr10	52833283	52835042	+	27.5	1759	promoter-TSS (NM_006258)	promoter-TSS (NM_006258)	-72	NM_006258	5592	Hs.407535	NM_006258	ENSG00000185532	PRKG1	AAT8|PKG|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha	"protein kinase, cGMP-dependent, type I"	protein-coding	27.52	2.91	9.457044674	7.03E-14
chr10-1888	chr10	61716793	61717793	+	15.4	1000	TTS (NR_024340)	TTS (NR_024340)	3378	NR_024340	283025	Hs.522955	NM_001017982	ENSG00000235931	LINC01553	C10orf40	long intergenic non-protein coding RNA 1553	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr10-1891	chr10	64530556	64531556	+	16.6	1000	Intergenic	Intergenic	-33460	NM_032804	84890	Hs.99821	NM_032804	ENSG00000181915	ADO	C10orf22	2-aminoethanethiol dioxygenase	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr10-1893	chr10	64862886	64863886	+	16.6	1000	Intergenic	AluSc|SINE|Alu	-29621	NM_001282405	29982	Hs.449628	NM_030759	ENSG00000148572	NRBF2	COPR|COPR1|COPR2|NRBF-2	nuclear receptor binding factor 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr10-1894	chr10	65470786	65471786	+	16.6	1000	Intergenic	L2c|LINE|L2	-189451	NM_001322258	221037	Hs.413416	NM_004241	ENSG00000171988	JMJD1C	KDM3C|TRIP-8|TRIP8	jumonji domain containing 1C	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr10-1898	chr10	71172008	71173008	+	16	1000	"intron (NM_001057, intron 2 of 4)"	"intron (NM_001057, intron 2 of 4)"	4166	NM_001057	6865	Hs.88372	NM_001057	ENSG00000075073	TACR2	NK2R|NKNAR|SKR|TAC2R	tachykinin receptor 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr10-1901	chr10	71271975	71272975	+	16.6	1000	Intergenic	L1ME1|LINE|L1	60735	NM_020999	50674	Hs.532682	NM_020999	ENSG00000122859	NEUROG3	Atoh5|Math4B|NGN-3|bHLHa7|ngn3	neurogenin 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr10-1906	chr10	71463087	71464087	+	16	1000	Intergenic	L1ME2|LINE|L1	73584	NM_145306	219738	Hs.522992	NM_145306	ENSG00000171224	C10orf35	-	chromosome 10 open reading frame 35	protein-coding	16	3.88	4.12371134	7.91E-05
chr10-1907	chr10	71655933	71656933	+	14.7	1000	"intron (NM_001320951, intron 13 of 37)"	"intron (NM_001320951, intron 13 of 37)"	94789	NM_080805	1305	Hs.695934	NM_005203	ENSG00000197467	COL13A1	CMS19|COLXIIIA1	collagen type XIII alpha 1 chain	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-1908	chr10	71684921	71685921	+	16.6	1000	"intron (NM_001130103, intron 24 of 39)"	"intron (NM_001130103, intron 24 of 39)"	123777	NM_080805	1305	Hs.695934	NM_005203	ENSG00000197467	COL13A1	CMS19|COLXIIIA1	collagen type XIII alpha 1 chain	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr10-1911	chr10	71720591	71721591	+	16	1000	Intergenic	Intergenic	-91266	NM_018649	55506	Hs.499953	NM_018649	ENSG00000099284	H2AFY2	macroH2A2	H2A histone family member Y2	protein-coding	16	2.43	6.58436214	7.90E-07
chr10-1919	chr10	72387107	72388107	+	16	1000	Intergenic	L1MB7|LINE|L1	-25076	NM_005041	5551	Hs.2200	NM_005041	ENSG00000180644	PRF1	FLH2|HPLH2|P1|PFN1|PFP	perforin 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr10-1921	chr10	72513718	72515404	+	27.5	1686	"intron (NM_080722, intron 19 of 21)"	L2b|LINE|L2	27768	NR_134534	219793	Hs.386698	NM_152710	ENSG00000166220	TBATA	C10orf27|SPATIAL	"thymus, brain and testes associated"	protein-coding	27.52	2.91	9.457044674	7.03E-14
chr10-1923	chr10	72674271	72675271	+	16	1000	Intergenic	Intergenic	-24039	NR_134314	105378349	Hs.119164	NR_134313	ENSG00000259267	LOC105378349	-	uncharacterized LOC105378349	ncRNA	16	1.46	10.95890411	3.44E-09
chr10-1926	chr10	72828059	72833173	+	74.2	5114	Intergenic	Intergenic	131806	NR_134313	105378349	Hs.119164	NR_134313	ENSG00000259267	LOC105378349	-	uncharacterized LOC105378349	ncRNA	74.25	8.25	9	6.56E-35
chr10-193	chr10	46985732	46986732	+	23	1000	Intergenic	MLT1J-int|LTR|ERVL-MaLR	-7314	NM_014696	9721	Hs.523375	NM_014696	ENSG00000204175	GPRIN2	GRIN2|KIAA0514	G protein regulated inducer of neurite outgrowth 2	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr10-1930	chr10	73081060	73082060	+	16	1000	"intron (NR_033414, intron 1 of 3)"	"intron (NR_033414, intron 1 of 3)"	2550	NM_018344	55315	Hs.438419	NM_018344	ENSG00000198246	SLC29A3	ENT3|HCLAP|HJCD|PHID	solute carrier family 29 member 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr10-1935	chr10	73243013	73244013	+	15.4	1000	"intron (NM_052836, intron 3 of 12)"	MIR|SINE|MIR	28164	NR_120672	102723377	Hs.568789	NR_120672	ENSG00000223817	CDH23-AS1	C10orf106|NCRNA00223|bA327E2.3	CDH23 antisense RNA 1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr10-1936	chr10	73272402	73274654	+	35.8	2252	"intron (NM_052836, intron 6 of 12)"	MIR3|SINE|MIR	-1851	NR_120672	102723377	Hs.568789	NR_120672	ENSG00000223817	CDH23-AS1	C10orf106|NCRNA00223|bA327E2.3	CDH23 antisense RNA 1	ncRNA	35.84	5.82	6.158075601	1.09E-13
chr10-1939	chr10	73373581	73374905	+	19.8	1324	"intron (NM_052836, intron 9 of 12)"	"intron (NM_052836, intron 9 of 12)"	-102566	NR_120672	102723377	Hs.568789	NR_120672	ENSG00000223817	CDH23-AS1	C10orf106|NCRNA00223|bA327E2.3	CDH23 antisense RNA 1	ncRNA	19.84	0.97	20.45360825	5.65E-15
chr10-1943	chr10	73745196	73746196	+	14.1	1000	"intron (NM_004273, intron 1 of 2)"	L1MD1|LINE|L1	21576	NM_004273	9469	Hs.158304	NM_004273	ENSG00000122863	CHST3	C6ST|C6ST1|HSD	carbohydrate sulfotransferase 3	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr10-1944	chr10	75670281	75674214	+	65.9	3933	"intron (NM_002658, intron 4 of 10)"	"intron (NM_002658, intron 4 of 10)"	1388	NM_001319191	5328	Hs.77274	NM_002658	ENSG00000122861	PLAU	ATF|BDPLT5|QPD|UPA|URK|u-PA	"plasminogen activator, urokinase"	protein-coding	65.93	11.65	5.659227468	7.10E-22
chr10-1948	chr10	77218526	77219526	+	16.6	1000	"intron (NM_001305581, intron 2 of 6)"	AluJr|SINE|Alu	27622	NM_001305581	83938	Hs.118161	NM_032024	ENSG00000148655	C10orf11	CDA017	chromosome 10 open reading frame 11	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr10-1950	chr10	77429764	77430764	+	16	1000	"intron (NR_131178, intron 1 of 7)"	"intron (NR_131178, intron 1 of 7)"	22997	NR_131178	83938	Hs.118161	NM_032024	ENSG00000148655	C10orf11	CDA017	chromosome 10 open reading frame 11	protein-coding	16	3.4	4.705882353	2.25E-05
chr10-1952	chr10	77542404	77543675	+	18.6	1271	"intron (NM_032024, intron 1 of 5)"	"intron (NM_032024, intron 1 of 5)"	520	NM_032024	83938	Hs.118161	NM_032024	ENSG00000148655	C10orf11	CDA017	chromosome 10 open reading frame 11	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr10-1953	chr10	77769862	77770862	+	16	1000	"intron (NR_131178, intron 3 of 7)"	AluSc8|SINE|Alu	227843	NM_032024	83938	Hs.118161	NM_032024	ENSG00000148655	C10orf11	CDA017	chromosome 10 open reading frame 11	protein-coding	16	1.94	8.24742268	7.67E-08
chr10-1954	chr10	78708298	78709298	+	16.6	1000	"intron (NM_001322832, intron 21 of 27)"	"intron (NM_001322832, intron 21 of 27)"	60996	NR_120655	101929328	Hs.664552	NR_120655	ENSG00000236467	KCNMA1-AS1	-	KCNMA1 antisense RNA 1	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr10-1957	chr10	78926815	78927815	+	16	1000	"intron (NM_001322832, intron 5 of 27)"	(ATG)n|Simple_repeat|Simple_repeat	26726	NR_120654	101929310	Hs.666457	NR_120654	ENSG00000225497	KCNMA1-AS2	-	KCNMA1 antisense RNA 2	ncRNA	16	3.4	4.705882353	2.25E-05
chr10-1958	chr10	78931341	78932341	+	16	1000	"intron (NM_001322832, intron 5 of 27)"	"intron (NM_001322832, intron 5 of 27)"	31252	NR_120654	101929310	Hs.666457	NR_120654	ENSG00000225497	KCNMA1-AS2	-	KCNMA1 antisense RNA 2	ncRNA	16	3.4	4.705882353	2.25E-05
chr10-1959	chr10	78962462	78964013	+	23	1551	"intron (NM_001322832, intron 3 of 27)"	L2c|LINE|L2	62648	NR_120654	101929310	Hs.666457	NR_120654	ENSG00000225497	KCNMA1-AS2	-	KCNMA1 antisense RNA 2	ncRNA	23.04	4.85	4.750515464	1.15E-07
chr10-1964	chr10	79458546	79459546	+	16	1000	Intergenic	L1ME3E|LINE|L1	-61469	NM_001271522	3778	Hs.144795	NM_002247	ENSG00000156113	KCNMA1	BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1	potassium calcium-activated channel subfamily M alpha 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr10-1969	chr10	80101775	80102775	+	16	1000	Intergenic	L3b|LINE|CR1	75190	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA	16	1.46	10.95890411	3.44E-09
chr10-1970	chr10	80116162	80117162	+	15.4	1000	Intergenic	Intergenic	89577	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr10-1971	chr10	80194429	80196045	+	26.9	1616	Intergenic	Intergenic	168152	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA	26.88	3.88	6.927835052	1.44E-11
chr10-1972	chr10	80295503	80296503	+	16	1000	Intergenic	Intergenic	268918	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA	16	2.43	6.58436214	7.90E-07
chr10-1977	chr10	80540050	80541050	+	16	1000	Intergenic	Intergenic	286655	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA	16	2.91	5.498281787	4.98E-06
chr10-1978	chr10	80617507	80618507	+	16.6	1000	Intergenic	L1MB8|LINE|L1	209198	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr10-1983	chr10	80695227	80696227	+	16.6	1000	Intergenic	Intergenic	131478	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr10-1984	chr10	80735666	80737121	+	21.8	1455	"intron (NR_015429, intron 3 of 7)"	"intron (NR_015429, intron 3 of 7)"	90812	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA	21.76	2.91	7.47766323	3.87E-10
chr10-1986	chr10	81194296	81200633	+	81.9	6337	"intron (NM_153367, intron 1 of 3)"	"intron (NM_153367, intron 1 of 3)"	7919	NM_153367	219654	Hs.523080	NM_153367	ENSG00000165424	ZCCHC24	C10orf56|Z3CXXC8	zinc finger CCHC-type containing 24	protein-coding	81.93	18.93	4.328050713	2.88E-21
chr10-1989	chr10	82167407	82168728	+	18.6	1321	promoter-TSS (NM_001243781)	promoter-TSS (NM_001243781)	-175	NM_032333	84293	Hs.500333	NM_032333	ENSG00000122378	FAM213A	C10orf58|PAMM	family with sequence similarity 213 member A	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr10-1990	chr10	82192659	82194880	+	33.3	2221	Intergenic	AluSq|SINE|Alu	20194	NM_001243782	84293	Hs.500333	NM_032333	ENSG00000122378	FAM213A	C10orf58|PAMM	family with sequence similarity 213 member A	protein-coding	33.28	5.34	6.232209738	6.04E-13
chr10-1991	chr10	82328288	82329739	+	23.7	1451	"intron (NM_001145719, intron 1 of 6)"	MLT1J1|LTR|ERVL-MaLR	28438	NM_001145719	387694	Hs.147643	NM_207372	ENSG00000178217	SH2D4B	-	SH2 domain containing 4B	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr10-1999	chr10	91104428	91105428	+	16.6	1000	Intergenic	AluSx1|SINE|Alu	12692	NM_001031683	3437	Hs.47338	NM_001549	ENSG00000119917	IFIT3	CIG-49|GARG-49|IFI60|IFIT4|IRG2|ISG60|P60|RIG-G|cig41	interferon induced protein with tetratricopeptide repeats 3	protein-coding	16.64	0	17.14115603	3.68E-16
chr10-2001	chr10	92499125	92500125	+	16.6	1000	TTS (NM_019859)	TTS (NM_019859)	118046	NM_000872	3363	Hs.73739	NM_000872	ENSG00000148680	HTR7	5-HT7	5-hydroxytryptamine receptor 7	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr10-2002	chr10	93284600	93285600	+	16	1000	"intron (NR_024467, intron 2 of 4)"	LTR16A|LTR|ERVL	86117	NR_024467	100188947	Hs.535293	NR_024467		HECTD2-AS1	-	HECTD2 antisense RNA 1	ncRNA	16	2.91	5.498281787	4.98E-06
chr10-2005	chr10	95036518	95037781	+	17.3	1263	Intergenic	Intergenic	203502	NM_000783	1592	Hs.150595	NM_000783	ENSG00000095596	CYP26A1	CP26|CYP26|P450RAI|P450RAI1	cytochrome P450 family 26 subfamily A member 1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr10-2006	chr10	95087862	95088862	+	16.6	1000	"intron (NM_013451, intron 45 of 53)"	"intron (NM_013451, intron 45 of 53)"	153712	NM_133337	26509	Hs.602086	NM_013451	ENSG00000138119	MYOF	FER1L3	myoferlin	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr10-2008	chr10	95249943	95250943	+	16	1000	Intergenic	HERV16-int|LTR|ERVL	-5926	NM_001127182	55165	Hs.14559	NM_018131	ENSG00000138180	CEP55	C10orf3|CT111|URCC6	centrosomal protein 55	protein-coding	16	0.97	16.49484536	3.54E-11
chr10-201	chr10	71337023	71338560	+	32	1537	Intergenic	CpG	-4581	NM_020999	50674	Hs.532682	NM_020999	ENSG00000122859	NEUROG3	Atoh5|Math4B|NGN-3|bHLHa7|ngn3	neurogenin 3	protein-coding	32	0.49	65.30612245	1.30E-36
chr10-2010	chr10	95838551	95839551	+	16	1000	"intron (NM_016341, intron 2 of 32)"	"intron (NM_016341, intron 2 of 32)"	-9732	NM_001165979	51196	Hs.655033	NM_016341	ENSG00000138193	PLCE1	NPHS3|PLCE|PPLC	phospholipase C epsilon 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr10-2015	chr10	98197777	98198777	+	15.4	1000	"intron (NM_012465, intron 3 of 20)"	L1MD2|LINE|L1	75406	NM_012465	7093	Hs.154296	NM_012465	ENSG00000095587	TLL2	-	tolloid like 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr10-2017	chr10	98266223	98267223	+	16	1000	"intron (NM_012465, intron 1 of 20)"	MIRc|SINE|MIR	6960	NM_012465	7093	Hs.154296	NM_012465	ENSG00000095587	TLL2	-	tolloid like 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr10-2018	chr10	98377879	98378879	+	15.4	1000	"intron (NM_152309, intron 12 of 16)"	MIR|SINE|MIR	-31570	NM_020123	56889	Hs.500674	NM_020123	ENSG00000077147	TM9SF3	EP70-P-iso|SMBP	transmembrane 9 superfamily member 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr10-202	chr10	72690796	72692053	+	25.6	1257	Intergenic	Intergenic	-7386	NR_134314	105378349	Hs.119164	NR_134313	ENSG00000259267	LOC105378349	-	uncharacterized LOC105378349	ncRNA	25.6	6.31	4.057052298	2.77E-07
chr10-2021	chr10	99307821	99309463	+	23	1642	"intron (NM_024954, intron 1 of 2)"	"intron (NM_024954, intron 1 of 2)"	-23556	NM_001291218	26287	Hs.73708	NM_020349	ENSG00000165887	ANKRD2	ARPP	ankyrin repeat domain 2	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr10-2022	chr10	99376162	99377415	+	18.6	1253	"intron (NM_001098831, intron 3 of 4)"	"intron (NM_001098831, intron 3 of 4)"	16556	NM_178832	118812	Hs.217409	NM_178832	ENSG00000171160	MORN4	C10orf83|bA548K23.4|rtp	MORN repeat containing 4	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr10-2024	chr10	99443437	99444437	+	16	1000	"intron (NM_021732, intron 1 of 2)"	"intron (NM_021732, intron 1 of 2)"	3078	NM_021732	60370	Hs.23918	NM_021732	ENSG00000119986	AVPI1	PP5395|VIP32|VIT32	arginine vasopressin induced 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr10-2026	chr10	99592413	99594765	+	32	2352	"intron (NR_108035, intron 1 of 2)"	L1ME3E|LINE|L1	15966	NR_108035	100505561	Hs.351904	NR_108035	ENSG00000227356	LINC00866	-	long intergenic non-protein coding RNA 866	ncRNA	32	4.85	6.597938144	5.03E-13
chr10-2028	chr10	99631443	99633993	+	35.2	2550	"intron (NM_018058, intron 14 of 14)"	"intron (NM_018058, intron 14 of 14)"	22723	NM_001010917	401647	Hs.567524	NM_001010917	ENSG00000155265	GOLGA7B	C10orf132|C10orf133|bA451M19.3|bA459F3.4	golgin A7 family member B	protein-coding	35.2	4.37	8.054919908	8.51E-16
chr10-2032	chr10	99777537	99779131	+	26.2	1594	"intron (NM_018058, intron 1 of 14)"	"intron (NM_018058, intron 1 of 14)"	12251	NM_001206528	55118	Hs.500736	NM_018058	ENSG00000095713	CRTAC1	ASPIC|ASPIC1|CEP-68	cartilage acidic protein 1	protein-coding	26.24	2.43	10.79835391	2.44E-14
chr10-2033	chr10	99783513	99786579	+	39.7	3066	"intron (NM_018058, intron 1 of 14)"	MER20|DNA|hAT-Charlie	5539	NM_001206528	55118	Hs.500736	NM_018058	ENSG00000095713	CRTAC1	ASPIC|ASPIC1|CEP-68	cartilage acidic protein 1	protein-coding	39.69	5.34	7.43258427	3.64E-17
chr10-2034	chr10	99863852	99864852	+	16	1000	Intergenic	Intergenic	-30029	NM_001256619	27291	Hs.419800	NM_014472	ENSG00000166024	R3HCC1L	C10orf28|GIDRP86|GIDRP88|PSORT	R3H domain and coiled-coil containing 1 like	protein-coding	16	2.91	5.498281787	4.98E-06
chr10-2039	chr10	100228793	100229793	+	14.7	1000	"intron (NM_001166246, intron 11 of 12)"	"intron (NM_001166246, intron 11 of 12)"	-22573	NM_001322481	3257	Hs.404568	NM_000195	ENSG00000107521	HPS1	BLOC3S1|HPS	"HPS1, biogenesis of lysosomal organelles complex 3 subunit 1"	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr10-2049	chr10	102561161	102562969	+	27.5	1808	"intron (NM_003987, intron 6 of 10)"	"intron (NM_003987, intron 6 of 10)"	56597	NM_003989	5076	Hs.155644	NM_000278	ENSG00000075891	PAX2	FSGS7|PAPRS	paired box 2	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr10-2054	chr10	102592729	102593729	+	15.4	1000	Intergenic	MLT1K|LTR|ERVL-MaLR	-79097	NM_001136123	55719	Hs.447458	NM_018121	ENSG00000119906	SLF2	C10orf6|FAM178A	SMC5-SMC6 complex localization factor 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr10-2059	chr10	102908902	102909902	+	16.6	1000	Intergenic	Intergenic	-8379	NR_130724	100038246	Hs.368784	NM_001085398	ENSG00000236311	TLX1NB	APT-B7|TD1|TDI	TLX1 neighbor	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr10-2061	chr10	102947127	102948127	+	16	1000	"intron (NR_120620, intron 3 of 5)"	HERVH-int|LTR|ERV1	11548	NR_120620	101927396	Hs.551648	NR_120620	ENSG00000237579	LINC01514	-	long intergenic non-protein coding RNA 1514	ncRNA	16	1.94	8.24742268	7.67E-08
chr10-2067	chr10	103002971	103003971	+	16	1000	Intergenic	Intergenic	14120	NR_029380	399806	Hs.386143	NR_029380		LBX1-AS1	MUSE	LBX1 antisense RNA 1 (head to head)	ncRNA	16	2.91	5.498281787	4.98E-06
chr10-207	chr10	79686697	79688464	+	35.2	1767	"non-coding (NR_024585, exon 1 of 1)"	"non-coding (NR_024585, exon 1 of 1)"	1010	NR_024585	100128292	Hs.547908	NR_024585		DLG5-AS1	-	DLG5 antisense RNA 1	ncRNA	35.2	4.85	7.257731959	1.02E-14
chr10-2071	chr10	103065006	103066006	+	16.6	1000	Intergenic	Intergenic	-42199	NR_120621	101927419	Hs.638503	NR_120621	ENSG00000229649	LOC101927419	-	uncharacterized LOC101927419	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr10-2074	chr10	105266027	105269723	+	44.2	3696	"intron (NR_120675, intron 2 of 3)"	"intron (NR_120675, intron 2 of 3)"	9324	NR_120676	102724341	Hs.599425	NR_120675	ENSG00000235470	NEURL1-AS1	-	NEURL1 antisense RNA 1	ncRNA	44.17	8.74	5.053775744	1.04E-13
chr10-2075	chr10	105313270	105314270	+	15.4	1000	"intron (NM_004210, intron 1 of 5)"	MIRc|SINE|MIR	-36571	NR_120675	102724341	Hs.599425	NR_120675	ENSG00000235470	NEURL1-AS1	-	NEURL1 antisense RNA 1	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr10-2080	chr10	106272876	106273876	+	14.7	1000	Intergenic	Intergenic	-33343	NR_120624	101927523	Hs.407539	NR_120624	ENSG00000225768	LOC101927523	-	uncharacterized LOC101927523	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr10-2081	chr10	110789795	110791231	+	22.4	1436	Intergenic	Intergenic	892491	NM_001324136	7511	Hs.390623	NM_020383	ENSG00000108039	XPNPEP1	APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1	X-prolyl aminopeptidase 1	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr10-2084	chr10	111952035	111953035	+	16.6	1000	Intergenic	L1MD1|LINE|L1	-14828	NM_130439	4601	Hs.602078	NM_005962	ENSG00000119950	MXI1	MAD2|MXD2|MXI|bHLHc11	"MAX interactor 1, dimerization protein"	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr10-2086	chr10	112102579	112103579	+	16	1000	Intergenic	Intergenic	-38372	NM_005871	10285	Hs.632093	NM_005871	ENSG00000119953	SMNDC1	SMNR|SPF30|TDRD16C	survival motor neuron domain containing 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr10-2087	chr10	112118442	112119442	+	16.6	1000	Intergenic	Intergenic	-54235	NM_005871	10285	Hs.632093	NM_005871	ENSG00000119953	SMNDC1	SMNR|SPF30|TDRD16C	survival motor neuron domain containing 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr10-2088	chr10	112166505	112169769	+	41	3264	Intergenic	Intergenic	-89488	NM_004419	1847	Hs.2128	NM_004419	ENSG00000138166	DUSP5	DUSP|HVH3	dual specificity phosphatase 5	protein-coding	40.97	5.82	7.0395189	5.30E-17
chr10-2091	chr10	112589949	112591225	+	19.2	1276	"intron (NM_001134363, intron 12 of 13)"	"intron (NM_001134363, intron 12 of 13)"	40075	NR_026932	282997	Hs.599931	NR_026932		PDCD4-AS1	-	PDCD4 antisense RNA 1	ncRNA	19.2	0.97	19.79381443	5.65E-15
chr10-2092	chr10	113526239	113527239	+	16.6	1000	Intergenic	MER89-int|LTR|ERV1	416798	NM_001244949	57678	Hs.42586	NM_020918	ENSG00000119927	GPAM	GPAT|GPAT1	"glycerol-3-phosphate acyltransferase, mitochondrial"	protein-coding	16.64	0	17.14115603	3.68E-16
chr10-2093	chr10	113769964	113771387	+	20.5	1423	Intergenic	Intergenic	172862	NM_001244949	57678	Hs.42586	NM_020918	ENSG00000119927	GPAM	GPAT|GPAT1	"glycerol-3-phosphate acyltransferase, mitochondrial"	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr10-2094	chr10	115149372	115151076	+	26.9	1704	Intergenic	Intergenic	-160366	NM_001177660	3026	Hs.422542	NM_004132	ENSG00000148702	HABP2	FSAP|HABP|HGFAL|NMTC5|PHBP	hyaluronan binding protein 2	protein-coding	26.88	1.94	13.8556701	2.90E-17
chr10-2097	chr10	115202818	115204289	+	23	1471	Intergenic	Intergenic	-107037	NM_001177660	3026	Hs.422542	NM_004132	ENSG00000148702	HABP2	FSAP|HABP|HGFAL|NMTC5|PHBP	hyaluronan binding protein 2	protein-coding	23.04	5.34	4.314606742	4.49E-07
chr10-210	chr10	102892035	102893525	+	26.9	1490	"intron (NM_005521, intron 1 of 2)"	"intron (NM_005521, intron 1 of 2)"	1719	NM_001195517	3195	Hs.89583	NM_005521	ENSG00000107807	TLX1	HOX11|TCL3	T-cell leukemia homeobox 1	protein-coding	26.88	6.31	4.259904913	6.42E-08
chr10-2103	chr10	115760249	115762798	+	39.7	2549	Intergenic	Intergenic	-42283	NM_000684	153	Hs.99913	NM_000684	ENSG00000043591	ADRB1	ADRB1R|B1AR|BETA1AR|RHR	adrenoceptor beta 1	protein-coding	39.69	7.28	5.451923077	1.26E-13
chr10-2106	chr10	115837690	115838690	+	14.7	1000	Intergenic	Intergenic	34384	NM_000684	153	Hs.99913	NM_000684	ENSG00000043591	ADRB1	ADRB1R|B1AR|BETA1AR|RHR	adrenoceptor beta 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-211	chr10	102899906	102901173	+	24.3	1267	"non-coding (NR_130724, exon 1 of 3)"	"non-coding (NR_130724, exon 1 of 3)"	484	NR_130724	100038246	Hs.368784	NM_001085398	ENSG00000236311	TLX1NB	APT-B7|TD1|TDI	TLX1 neighbor	ncRNA	24.32	5.34	4.554307116	9.72E-08
chr10-2111	chr10	116848632	116849897	+	17.9	1265	Intergenic	Intergenic	-3860	NM_207303	26033	Hs.501127	NM_207303	ENSG00000107518	ATRNL1	ALP|bA338L11.1|bA454H24.1	attractin like 1	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr10-2113	chr10	116852376	116854673	+	41	2297	"exon (NM_001276282, exon 1 of 9)"	"exon (NM_001276282, exon 1 of 9)"	400	NM_001276282	26033	Hs.501127	NM_207303	ENSG00000107518	ATRNL1	ALP|bA338L11.1|bA454H24.1	attractin like 1	protein-coding	40.97	4.85	8.44742268	3.22E-19
chr10-2116	chr10	118574669	118575669	+	15.4	1000	"intron (NM_001330164, intron 2 of 12)"	"intron (NM_001330164, intron 2 of 12)"	-33854	NM_001242699	387712	Hs.693248	NM_001242699	ENSG00000188316	ENO4	C10orf134	enolase family member 4	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr10-2118	chr10	119136396	119137396	+	14.7	1000	Intergenic	Intergenic	-1918	NM_173791	118987	Hs.501149	NM_173791	ENSG00000165650	PDZD8	PDZK8	PDZ domain containing 8	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr10-2123	chr10	119332571	119333571	+	16.6	1000	Intergenic	Intergenic	-28492	NR_002791	196047	Hs.312592	NR_002791	ENSG00000229847	EMX2OS	EMX2-AS1|NCRNA00045	EMX2 opposite strand/antisense RNA	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr10-2125	chr10	119380870	119382529	+	28.2	1659	Intergenic	Intergenic	-77120	NR_002791	196047	Hs.312592	NR_002791	ENSG00000229847	EMX2OS	EMX2-AS1|NCRNA00045	EMX2 opposite strand/antisense RNA	ncRNA	28.16	4.85	5.806185567	1.30E-10
chr10-2126	chr10	119585608	119586608	+	15.4	1000	Intergenic	MIRb|SINE|MIR	220006	NM_014904	22841	Hs.173656	NM_014904	ENSG00000107560	RAB11FIP2	Rab11-FIP2|nRip11	RAB11 family interacting protein 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr10-2127	chr10	119644223	119645512	+	23.7	1289	Intergenic	Intergenic	161247	NM_014904	22841	Hs.173656	NM_014904	ENSG00000107560	RAB11FIP2	Rab11-FIP2|nRip11	RAB11 family interacting protein 2	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr10-213	chr10	105864153	105865153	+	23.7	1000	Intergenic	Intergenic	-17163	NM_145247	119392	Hs.93667	NM_145247	ENSG00000156384	SFR1	C10orf78|MEI5|MEIR5|bA373N18.1	SWI5 dependent homologous recombination repair protein 1	protein-coding	23.68	1.94	12.20618557	6.71E-14
chr10-2132	chr10	120276022	120277022	+	14.1	1000	Intergenic	Intergenic	78638	NM_004248	2834	Hs.248119	NM_004248	ENSG00000119973	PRLHR	GPR10|GR3|PrRPR	prolactin releasing hormone receptor	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr10-2134	chr10	120316885	120317885	+	16	1000	Intergenic	L1ME3|LINE|L1	37775	NM_004248	2834	Hs.248119	NM_004248	ENSG00000119973	PRLHR	GPR10|GR3|PrRPR	prolactin releasing hormone receptor	protein-coding	16	0.97	16.49484536	3.54E-11
chr10-2135	chr10	120593129	120594387	+	17.9	1258	Intergenic	L1PA10|LINE|L1	-79000	NM_153810	143384	Hs.420024	NM_153810	ENSG00000151893	CACUL1	C10orf46|CAC1	CDK2 associated cullin domain 1	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr10-2137	chr10	120752696	120754112	+	20.5	1416	Intergenic	MLT1K|LTR|ERVL-MaLR	-35824	NM_199461	340719	Hs.591918	NM_199461	ENSG00000188613	NANOS1	EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A	nanos C2HC-type zinc finger 1	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr10-2139	chr10	121725480	121726480	+	16	1000	Intergenic	L1M5|LINE|L1	7955	NR_039830	100616322		NR_039830	ENSG00000265370	MIR4682	-	microRNA 4682	ncRNA	16	0.97	16.49484536	3.54E-11
chr10-2141	chr10	123150863	123151863	+	14.7	1000	Intergenic	Intergenic	139465	NM_001320654	2263	Hs.533683	NM_000141	ENSG00000066468	FGFR2	BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25	fibroblast growth factor receptor 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-2144	chr10	123262644	123263644	+	16	1000	"intron (NM_001144918, intron 8 of 15)"	"intron (NM_001144918, intron 8 of 15)"	27684	NM_001320654	2263	Hs.533683	NM_000141	ENSG00000066468	FGFR2	BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25	fibroblast growth factor receptor 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr10-2145	chr10	123353777	123354777	+	14.7	1000	promoter-TSS (NM_001144913)	promoter-TSS (NM_001144913)	-505	NM_001144916	2263	Hs.533683	NM_000141	ENSG00000066468	FGFR2	BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25	fibroblast growth factor receptor 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr10-2146	chr10	123487456	123488456	+	16.6	1000	Intergenic	L1ME3A|LINE|L1	-129984	NR_073009	2263	Hs.533683	NM_000141	ENSG00000066468	FGFR2	BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25	fibroblast growth factor receptor 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr10-2147	chr10	124089755	124090755	+	15.4	1000	"intron (NM_001318189, intron 11 of 15)"	AluSx|SINE|Alu	-43839	NM_001001974	59338	Hs.643512	NM_021622	ENSG00000107679	PLEKHA1	TAPP1	pleckstrin homology domain containing A1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr10-2149	chr10	124906561	124909210	+	49.3	2649	"5' UTR (NM_005519, exon 1 of 2)"	"5' UTR (NM_005519, exon 1 of 2)"	247	NM_005519	3167	Hs.444756	NM_005519	ENSG00000188816	HMX2	H6L|Nkx5-2	H6 family homeobox 2	protein-coding	49.29	5.82	8.469072165	2.31E-22
chr10-2152	chr10	125253409	125254409	+	14.7	1000	Intergenic	Intergenic	-171962	NM_153442	2849	Hs.12751	NM_153442	ENSG00000154478	GPR26	-	G protein-coupled receptor 26	protein-coding	14.72	0	15.16333034	3.99E-13
chr10-2155	chr10	125765116	125766116	+	16	1000	Intergenic	MSTB1|LTR|ERVL-MaLR	86324	NM_015892	51363	Hs.287537	NM_014863	ENSG00000182022	CHST15	BRAG|GALNAC4S-6ST	carbohydrate sulfotransferase 15	protein-coding	16	1.46	10.95890411	3.44E-09
chr10-2157	chr10	126711233	126712233	+	16	1000	"intron (NM_001083914, intron 3 of 10)"	"intron (NM_001083914, intron 3 of 10)"	4720	NM_022802	1488	Hs.501345	NM_001329	ENSG00000175029	CTBP2	-	C-terminal binding protein 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr10-2158	chr10	126717860	126718860	+	16.6	1000	"intron (NM_001083914, intron 3 of 10)"	"intron (NM_001083914, intron 3 of 10)"	-1907	NM_022802	1488	Hs.501345	NM_001329	ENSG00000175029	CTBP2	-	C-terminal binding protein 2	protein-coding	16.64	0	17.14115603	3.68E-16
chr10-2165	chr10	127277907	127278907	+	16.6	1000	"intron (NM_001318133, intron 3 of 3)"	"intron (NM_001318133, intron 3 of 3)"	15467	NR_023362	100169752	Hs.652647	NR_023362	ENSG00000237675	TEX36-AS1	-	TEX36 antisense RNA 1	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr10-2167	chr10	127781664	127782930	+	20.5	1266	"intron (NM_003474, intron 11 of 22)"	"intron (NM_003474, intron 11 of 22)"	-120455	NR_102707	101410540	Hs.557889	NR_102707	ENSG00000233409	FANK1-AS1	-	FANK1 antisense RNA 1	ncRNA	20.48	2.43	8.427983539	2.25E-10
chr10-2169	chr10	129101695	129104832	+	48	3137	"intron (NM_001380, intron 29 of 51)"	"intron (NM_001380, intron 29 of 51)"	-108841	NM_001039762	642938	Hs.613882	NM_001039762	ENSG00000188916	FAM196A	C10orf141|INSYN2	family with sequence similarity 196 member A	protein-coding	48.01	8.25	5.819393939	1.22E-16
chr10-2171	chr10	129112114	129113387	+	23	1273	"intron (NM_001380, intron 29 of 51)"	"intron (NM_001380, intron 29 of 51)"	-118328	NM_001039762	642938	Hs.613882	NM_001039762	ENSG00000188916	FAM196A	C10orf141|INSYN2	family with sequence similarity 196 member A	protein-coding	23.04	0	23.73390835	2.80E-24
chr10-2174	chr10	129816293	129818224	+	30.7	1931	"intron (NM_001323354, intron 1 of 19)"	"intron (NM_001323354, intron 1 of 19)"	20868	NM_001323354	5791	Hs.127022	NM_006504	ENSG00000132334	PTPRE	HPTPE|PTPE|R-PTP-EPSILON	"protein tyrosine phosphatase, receptor type E"	protein-coding	30.72	5.34	5.752808989	2.29E-11
chr10-2177	chr10	130097767	130098767	+	16.6	1000	"intron (NR_120619, intron 2 of 5)"	L2c|LINE|L2	14053	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr10-2179	chr10	130183444	130184444	+	16	1000	Intergenic	AluY|SINE|Alu	99730	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	16	2.43	6.58436214	7.90E-07
chr10-2180	chr10	130186849	130188105	+	19.2	1256	Intergenic	L2c|LINE|L2	103263	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	19.2	1.46	13.15068493	1.82E-12
chr10-2184	chr10	130655756	130656756	+	16.6	1000	Intergenic	Intergenic	572042	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr10-2187	chr10	130831014	130832014	+	15.4	1000	Intergenic	Intergenic	-433934	NM_002412	4255	Hs.501522	NM_002412	ENSG00000170430	MGMT	-	O-6-methylguanine-DNA methyltransferase	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr10-2190	chr10	131168221	131169221	+	16.6	1000	Intergenic	L1ME4a|LINE|L1	-96727	NM_002412	4255	Hs.501522	NM_002412	ENSG00000170430	MGMT	-	O-6-methylguanine-DNA methyltransferase	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr10-2194	chr10	131657628	131659187	+	21.1	1559	"intron (NM_001005463, intron 10 of 15)"	"intron (NM_001005463, intron 10 of 15)"	-16769	NR_036179	100422873		NR_036179	ENSG00000266676	MIR4297	-	microRNA 4297	ncRNA	21.12	3.4	6.211764706	2.41E-08
chr10-2195	chr10	131661304	131662304	+	16	1000	"intron (NM_001005463, intron 10 of 15)"	"intron (NM_001005463, intron 10 of 15)"	-20166	NR_036179	100422873		NR_036179	ENSG00000266676	MIR4297	-	microRNA 4297	ncRNA	16	2.91	5.498281787	4.98E-06
chr10-2199	chr10	132055450	132056450	+	16	1000	Intergenic	Intergenic	121277	NM_001321980	10539	Hs.42644	NM_006541	ENSG00000108010	GLRX3	GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3	glutaredoxin 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr10-2201	chr10	132659631	132661318	+	23.7	1687	Intergenic	MLT2B2|LTR|ERVL	100457	NR_036180	100422867		NR_036180	ENSG00000264803	MIR378C	mir-378c	microRNA 378c	ncRNA	23.68	3.4	6.964705882	5.45E-10
chr10-2202	chr10	132755210	132756210	+	16.6	1000	Intergenic	L2b|LINE|L2	5221	NR_036180	100422867		NR_036180	ENSG00000264803	MIR378C	mir-378c	microRNA 378c	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr10-2203	chr10	132884945	132885945	+	16.6	1000	Intergenic	Intergenic	-8036	NR_120623	101927489		NR_120623	ENSG00000230098	TCERG1L-AS1	-	TCERG1L antisense RNA 1	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr10-2204	chr10	132935550	132936550	+	14.1	1000	"intron (NM_174937, intron 7 of 11)"	"intron (NM_174937, intron 7 of 11)"	42569	NR_120623	101927489		NR_120623	ENSG00000230098	TCERG1L-AS1	-	TCERG1L antisense RNA 1	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr10-2205	chr10	133138729	133140035	+	22.4	1306	Intergenic	MLT1B|LTR|ERVL-MaLR	-29398	NM_174937	256536	Hs.126575	NM_174937	ENSG00000176769	TCERG1L	-	transcription elongation regulator 1 like	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr10-2206	chr10	133232153	133233153	+	16.6	1000	Intergenic	Intergenic	-122669	NM_174937	256536	Hs.126575	NM_174937	ENSG00000176769	TCERG1L	-	transcription elongation regulator 1 like	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr10-2207	chr10	133367650	133368650	+	16.6	1000	Intergenic	Intergenic	254385	NR_038365	399827	Hs.523353	NM_001001677	ENSG00000189275	LINC01164	-	long intergenic non-protein coding RNA 1164	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr10-2210	chr10	133561971	133562971	+	16	1000	Intergenic	Intergenic	60064	NR_038365	399827	Hs.523353	NM_001001677	ENSG00000189275	LINC01164	-	long intergenic non-protein coding RNA 1164	ncRNA	16	1.94	8.24742268	7.67E-08
chr10-2211	chr10	133637505	133638505	+	16	1000	Intergenic	Intergenic	-15470	NR_038365	399827	Hs.523353	NM_001001677	ENSG00000189275	LINC01164	-	long intergenic non-protein coding RNA 1164	ncRNA	16	2.91	5.498281787	4.98E-06
chr10-2213	chr10	133834367	133835367	+	16.6	1000	Intergenic	LTR43|LTR|ERV1	-39350	NM_004052	664	Hs.144873	NM_004052	ENSG00000176171	BNIP3	NIP3	BCL2 interacting protein 3	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr10-2214	chr10	133933309	133934973	+	26.9	1664	"intron (NM_001323089, intron 3 of 22)"	"intron (NM_001323089, intron 3 of 22)"	54670	NM_001323090	282973	Hs.106254	NM_194303	ENSG00000188385	JAKMIP3	C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5	Janus kinase and microtubule interacting protein 3	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr10-2216	chr10	134119612	134120976	+	22.4	1364	"intron (NM_001318878, intron 1 of 11)"	"intron (NM_001318878, intron 1 of 11)"	432	NM_001318879	282974	Hs.469002	NM_173575	ENSG00000165752	STK32C	PKE|YANK3	serine/threonine kinase 32C	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr10-2223	chr10	134780746	134781746	+	15.4	1000	"intron (NR_046231, intron 1 of 2)"	LTR1|LTR|ERV1	2208	NR_046231	399829	Hs.252872	NR_046231	ENSG00000240707	LINC01168	-	long intergenic non-protein coding RNA 1168	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr10-2224	chr10	134810907	134811907	+	16	1000	Intergenic	Intergenic	32369	NR_046231	399829	Hs.252872	NR_046231	ENSG00000240707	LINC01168	-	long intergenic non-protein coding RNA 1168	ncRNA	16	3.88	4.12371134	7.91E-05
chr10-2226	chr10	134984990	134985990	+	15.4	1000	"intron (NM_152643, intron 3 of 29)"	L1M5|LINE|L1	11532	NM_001347866	85442	Hs.530685	NM_152643	ENSG00000171798	KNDC1	C10orf23|RASGEF2|bB439H18.3	kinase non-catalytic C-lobe domain containing 1	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr10-2230	chr10	331219	332219	+	16	1000	"intron (NM_014974, intron 34 of 36)"	"intron (NM_014974, intron 34 of 36)"	-3693	NR_106988	102465753		NR_106988	ENSG00000280494	MIR7641-2	B-ATF|hsa-mir-7641-2	microRNA 7641-2	ncRNA	16	1.46	10.95890411	3.44E-09
chr10-2234	chr10	571168	573001	+	30.1	1833	"intron (NM_014974, intron 1 of 36)"	"intron (NM_014974, intron 1 of 36)"	115634	NR_049884	100847086		NR_049884	ENSG00000263511	MIR5699	mir-5699	microRNA 5699	ncRNA	30.08	5.82	5.16838488	6.85E-10
chr10-224	chr10	130370686	130372215	+	32.6	1529	Intergenic	Intergenic	287236	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	32.64	6.8	4.8	5.32E-10
chr10-2240	chr10	1253957	1255285	+	19.2	1328	"intron (NM_018702, intron 7 of 9)"	"intron (NM_018702, intron 7 of 9)"	48913	NR_015376	399706	Hs.721191	NM_001010910	ENSG00000229205	LINC00200	C10orf139|NCRNA00200	long intergenic non-protein coding RNA 200	ncRNA	19.2	3.4	5.647058824	1.47E-07
chr10-2245	chr10	1646184	1647184	+	16	1000	"intron (NM_018702, intron 1 of 9)"	"intron (NM_018702, intron 1 of 9)"	77859	NR_033387	642394	Hs.568831	NM_001098830	ENSG00000205696	ADARB2-AS1	C10orf109|NCRNA00168|bA466B20.1	ADARB2 antisense RNA 1	ncRNA	16	1.94	8.24742268	7.67E-08
chr10-2246	chr10	1715381	1716909	+	23	1528	"intron (NM_018702, intron 1 of 9)"	"intron (NM_018702, intron 1 of 9)"	63525	NM_018702	105	Hs.586663	NM_018702	ENSG00000185736	ADARB2	ADAR3|RED2	"adenosine deaminase, RNA specific B2 (inactive)"	protein-coding	23.04	3.4	6.776470588	5.45E-10
chr10-2247	chr10	1779422	1783127	+	47.4	3705	Intergenic	Intergenic	-1604	NM_018702	105	Hs.586663	NM_018702	ENSG00000185736	ADARB2	ADAR3|RED2	"adenosine deaminase, RNA specific B2 (inactive)"	protein-coding	47.37	9.71	4.878475798	1.65E-14
chr10-2251	chr10	1971540	1972540	+	15.4	1000	Intergenic	Intergenic	84502	NR_040253	282980	Hs.576810	NR_040253	ENSG00000234962	LINC00700	-	long intergenic non-protein coding RNA 700	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr10-2252	chr10	2020818	2021818	+	16	1000	Intergenic	MLT1E|LTR|ERVL-MaLR	35224	NR_040253	282980	Hs.576810	NR_040253	ENSG00000234962	LINC00700	-	long intergenic non-protein coding RNA 700	ncRNA	16	2.43	6.58436214	7.90E-07
chr10-2255	chr10	3219230	3220230	+	15.4	1000	Intergenic	L1MC|LINE|L1	-4697	NR_144639	10531	Hs.528300	NM_014889	ENSG00000107959	PITRM1	MP1|PreP	pitrilysin metallopeptidase 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr10-2256	chr10	3334236	3335915	+	28.8	1679	Intergenic	Intergenic	-25812	NR_131187	105376360	Hs.212226	NR_131187		LOC105376360	-	uncharacterized LOC105376360	ncRNA	28.8	2.91	9.896907216	7.24E-15
chr10-2257	chr10	3377701	3379019	+	18.6	1318	"intron (NR_131187, intron 1 of 1)"	"intron (NR_131187, intron 1 of 1)"	17473	NR_131187	105376360	Hs.212226	NR_131187		LOC105376360	-	uncharacterized LOC105376360	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr10-2258	chr10	3421393	3422393	+	16	1000	"intron (NR_131187, intron 1 of 1)"	"intron (NR_131187, intron 1 of 1)"	61006	NR_131187	105376360	Hs.212226	NR_131187		LOC105376360	-	uncharacterized LOC105376360	ncRNA	16	3.88	4.12371134	7.91E-05
chr10-2259	chr10	3577058	3578314	+	20.5	1256	"intron (NR_131187, intron 1 of 1)"	"intron (NR_131187, intron 1 of 1)"	216799	NR_131187	105376360	Hs.212226	NR_131187		LOC105376360	-	uncharacterized LOC105376360	ncRNA	20.48	1.46	14.02739726	1.29E-13
chr10-2264	chr10	4069414	4070414	+	16	1000	Intergenic	Intergenic	-24004	NR_120632	101927964	Hs.737041	NR_120632	ENSG00000236990	LOC101927964	-	uncharacterized LOC101927964	ncRNA	16	2.91	5.498281787	4.98E-06
chr10-2269	chr10	5519890	5520890	+	15.4	1000	Intergenic	Intergenic	21143	NM_017422	51806	Hs.180142	NM_017422	ENSG00000178372	CALML5	CLSP	calmodulin like 5	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-2282	chr10	10183603	10184603	+	14.7	1000	Intergenic	LTR16D2|LTR|ERVL	83418	NR_120636	101928298	Hs.385576	NR_120636	ENSG00000224788	LOC101928298	-	uncharacterized LOC101928298	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr10-2283	chr10	13494001	13495001	+	15.4	1000	"intron (NM_152751, intron 7 of 8)"	"intron (NM_152751, intron 7 of 8)"	50475	NM_001100912	222389	Hs.498740	NM_152751	ENSG00000165626	BEND7	C10orf30	BEN domain containing 7	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr10-2285	chr10	13547715	13548715	+	14.7	1000	Intergenic	Intergenic	-3239	NM_152751	222389	Hs.498740	NM_152751	ENSG00000165626	BEND7	C10orf30	BEN domain containing 7	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-2286	chr10	13562534	13563995	+	23	1461	Intergenic	MIRb|SINE|MIR	-18288	NM_152751	222389	Hs.498740	NM_152751	ENSG00000165626	BEND7	C10orf30	BEN domain containing 7	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr10-2288	chr10	13567223	13569676	+	44.2	2453	Intergenic	Intergenic	-23473	NM_152751	222389	Hs.498740	NM_152751	ENSG00000165626	BEND7	C10orf30	BEN domain containing 7	protein-coding	44.17	6.8	6.495588235	8.79E-17
chr10-229	chr10	8088929	8094269	+	91.5	5340	TTS (NR_024256)	TTS (NR_024256)	2855	NR_104329	399717	Hs.158992	NM_207423	ENSG00000197308	GATA3-AS1	-	GATA3 antisense RNA 1	ncRNA	91.53	9.71	9.426364573	1.97E-43
chr10-2291	chr10	14061960	14062960	+	14.7	1000	"intron (NM_018027, intron 2 of 24)"	"intron (NM_018027, intron 2 of 24)"	-11928	NM_001318336	55691	Hs.330463	NM_018027	ENSG00000151474	FRMD4A	CCAFCA|FRMD4|bA295P9.4	FERM domain containing 4A	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr10-2292	chr10	14104499	14105785	+	19.8	1286	"intron (NM_018027, intron 2 of 24)"	"intron (NM_018027, intron 2 of 24)"	-11141	NR_120638	101928453	Hs.650212	NR_120638		LOC101928453	-	uncharacterized LOC101928453	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr10-2294	chr10	14755794	14756794	+	15.4	1000	"intron (NM_031453, intron 1 of 4)"	LTR81A|LTR|Gypsy	60602	NM_031453	83641	Hs.446315	NM_031453	ENSG00000065809	FAM107B	C10orf45|HITS	family with sequence similarity 107 member B	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr10-230	chr10	11865085	11867942	+	43.5	2857	"intron (NM_153256, intron 1 of 3)"	"intron (NM_153256, intron 1 of 3)"	1116	NM_153256	254427	Hs.435775	NM_153256	ENSG00000148426	PROSER2	C10orf47	proline and serine rich 2	protein-coding	43.53	8.74	4.980549199	1.04E-13
chr10-2300	chr10	22523299	22524299	+	15.4	1000	Intergenic	Intergenic	-17202	NR_038921	100130992	Hs.48501	NR_038921		LOC100130992	-	uncharacterized LOC100130992	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr10-2301	chr10	22611010	22612010	+	15.4	1000	"intron (NM_005180, intron 1 of 9)"	"intron (NM_005180, intron 1 of 9)"	1371	NM_005180	648	Hs.380403	NM_005180	ENSG00000168283	BMI1	FLVI2/BMI1|PCGF4|RNF51|flvi-2/bmi-1	"BMI1 proto-oncogene, polycomb ring finger"	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr10-2303	chr10	22630074	22631404	+	26.2	1330	Intergenic	Intergenic	-3635	NM_172242	9576	Hs.655170	NM_012443	ENSG00000077327	SPAG6	CT141|Repro-SA-1|pf16	sperm associated antigen 6	protein-coding	26.24	5.82	4.508591065	7.99E-08
chr10-2305	chr10	25363578	25364578	+	15.4	1000	Intergenic	L3b|LINE|CR1	-12870	NM_001270383	219670	Hs.534486	NM_145010	ENSG00000151023	ENKUR	C10orf63|CFAP106	"enkurin, TRPC channel interacting protein"	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr10-2306	chr10	25889124	25890451	+	19.8	1327	"3' UTR (NM_020752, exon 11 of 11)"	"3' UTR (NM_020752, exon 11 of 11)"	-50854	NR_108068	101929052	Hs.128298	NR_108067	ENSG00000280809	LINC00836	-	long intergenic non-protein coding RNA 836	ncRNA	19.84	4.37	4.540045767	3.16E-06
chr10-2307	chr10	26497689	26498689	+	14.7	1000	"intron (NM_017433, intron 34 of 34)"	L2a|LINE|L2	-7047	NM_000818	2572	Hs.231829	NM_000818	ENSG00000136750	GAD2	GAD65	glutamate decarboxylase 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-2308	chr10	27547175	27548767	+	25	1592	"intron (NR_138082, intron 1 of 4)"	CpG	280	NR_138082	101060171	Hs.568842	NR_138082		ARMC4P1	-	armadillo repeat containing 4 pseudogene 1	pseudo	24.96	0.49	50.93877551	5.59E-26
chr10-2311	chr10	28961279	28962279	+	15.4	1000	Intergenic	Intergenic	-4645	NM_012342	25805	Hs.533336	NM_012342	ENSG00000095739	BAMBI	NMA	BMP and activin membrane bound inhibitor	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr10-2312	chr10	28985646	28986646	+	16	1000	Intergenic	AluSp|SINE|Alu	19722	NM_012342	25805	Hs.533336	NM_012342	ENSG00000095739	BAMBI	NMA	BMP and activin membrane bound inhibitor	protein-coding	16	2.43	6.58436214	7.90E-07
chr10-2313	chr10	29569083	29570083	+	15.4	1000	Intergenic	Intergenic	-8407	NM_032517	84569	Hs.558572	NM_032517	ENSG00000120563	LYZL1	KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1	lysozyme like 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr10-2314	chr10	30026870	30027870	+	16	1000	Intergenic	AluY|SINE|Alu	-1440	NM_001323599	6840	Hs.499209	NM_003174	ENSG00000197321	SVIL	-	supervillin	protein-coding	16	0	16.4818808	1.26E-14
chr10-2315	chr10	30844079	30845079	+	16	1000	Intergenic	7SLRNA|srpRNA|srpRNA	74068	NM_183058	119180	Hs.522610	NM_183058	ENSG00000151033	LYZL2	LYZD2	lysozyme like 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr10-2316	chr10	30866777	30867777	+	15.4	1000	Intergenic	AluJo|SINE|Alu	51370	NM_183058	119180	Hs.522610	NM_183058	ENSG00000151033	LYZL2	LYZD2	lysozyme like 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-2319	chr10	33511867	33512867	+	16	1000	"intron (NM_001024628, intron 7 of 11)"	AluJr|SINE|Alu	111466	NM_001330068	8829	Hs.131704	NM_003873	ENSG00000099250	NRP1	BDCA4|CD304|NP1|NRP|VEGF165R	neuropilin 1	protein-coding	16	1.46	10.95890411	3.44E-09
chr10-2323	chr10	33842638	33843638	+	16	1000	Intergenic	Intergenic	218470	NR_038932	100505583	Hs.568804	NR_038932	ENSG00000261683	LINC00838	-	long intergenic non-protein coding RNA 838	ncRNA	16	1.94	8.24742268	7.67E-08
chr10-2326	chr10	34068454	34069714	+	23	1260	Intergenic	Intergenic	-7476	NR_038932	100505583	Hs.568804	NR_038932	ENSG00000261683	LINC00838	-	long intergenic non-protein coding RNA 838	ncRNA	23.04	1.94	11.87628866	6.71E-14
chr10-2327	chr10	34364394	34365724	+	16.6	1330	Intergenic	Intergenic	-303451	NR_038932	100505583	Hs.568804	NR_038932	ENSG00000261683	LINC00838	-	long intergenic non-protein coding RNA 838	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr10-2328	chr10	35886645	35887645	+	16	1000	Intergenic	AluJr|SINE|Alu	-7193	NM_153368	219770	Hs.638922	NM_153368	ENSG00000177291	GJD4	CX40.1	gap junction protein delta 4	protein-coding	16	2.91	5.498281787	4.98E-06
chr10-2329	chr10	35980693	35984131	+	42.9	3438	Intergenic	Intergenic	-52050	NM_031866	8325	Hs.302634	NM_031866	ENSG00000177283	FZD8	FZ-8|hFZ8	frizzled class receptor 8	protein-coding	42.89	6.8	6.307352941	5.66E-16
chr10-2330	chr10	36007460	36008460	+	16	1000	Intergenic	Intergenic	-59270	NR_110138	102578074		NR_110138	ENSG00000280719	PCAT5	LINC01452|TPCAT-10-36067	prostate cancer associated transcript 5 (non-protein coding)	ncRNA	16	1.94	8.24742268	7.67E-08
chr10-2338	chr10	43809661	43810661	+	14.7	1000	Intergenic	Intergenic	-47794	NM_145313	221002	Hs.125293	NM_145313	ENSG00000198915	RASGEF1A	CG4853	RasGEF domain family member 1A	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-2340	chr10	44153399	44154399	+	15.4	1000	"intron (NR_038867, intron 1 of 4)"	LTR16C|LTR|ERVL	-9573	NM_001324166	7580	Hs.522885	NM_006973	ENSG00000169740	ZNF32	KOX30	zinc finger protein 32	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr10-2344	chr10	45211337	45212337	+	15.4	1000	Intergenic	Intergenic	-194927	NM_001123376	643236	Hs.292788	NM_001123376	ENSG00000187783	TMEM72	C10orf127|KSP37	transmembrane protein 72	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr10-2349	chr10	45775084	45776909	+	28.2	1825	Intergenic	HERVK3-int|LTR|ERVK	35060	NM_001004297	79290	Hs.532435	NM_001004297	ENSG00000256574	OR13A1	-	olfactory receptor family 13 subfamily A member 1	protein-coding	28.16	6.8	4.141176471	5.07E-08
chr10-235	chr10	46968738	46973193	+	97.9	4455	promoter-TSS (NM_031912)	promoter-TSS (NM_031912)	-364	NM_181519	83849	Hs.696346	NM_031912	ENSG00000204176	SYT15	CHR10SYT|sytXV	synaptotagmin 15	protein-coding	97.93	18.93	5.173269942	2.02E-29
chr10-2350	chr10	45913289	45915863	+	40.3	2574	"intron (NM_001256154, intron 4 of 12)"	CpG	33993	NR_120674	102724323	Hs.559151	NR_120674	ENSG00000231964	LOC102724323	-	uncharacterized LOC102724323	ncRNA	40.33	1.94	20.78865979	1.13E-29
chr10-2353	chr10	47031627	47032958	+	21.1	1331	Intergenic	Intergenic	38746	NM_014696	9721	Hs.523375	NM_014696	ENSG00000204175	GPRIN2	GRIN2|KIAA0514	G protein regulated inducer of neurite outgrowth 2	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr10-2358	chr10	47101836	47102836	+	14.7	1000	"intron (NR_033957, intron 1 of 3)"	"intron (NR_033957, intron 1 of 3)"	15611	NM_001278795	100996758	Hs.524719	NM_001278795	ENSG00000264717	CH17-360D5.1	-	neuropeptide Y receptor type 4-like	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-2368	chr10	48401267	48402267	+	14.1	1000	Intergenic	MLT2C2|LTR|ERVL	-10776	NM_002900	5949	Hs.591928	NM_002900	ENSG00000265203	RBP3	D10S64|D10S65|D10S66|IRBP|RBPI|RP66	retinol binding protein 3	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr10-2373	chr10	50467543	50468543	+	15.4	1000	Intergenic	Intergenic	38895	NR_108038	100506769	Hs.562293	NR_108038		C10orf71-AS1	-	C10orf71 antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr10-2377	chr10	56971181	56972181	+	14.1	1000	Intergenic	LTR9|LTR|ERV1	-387069	NM_001190478	100463289	Hs.727204	NM_001190478	ENSG00000249860	MTRNR2L5	HN5	MT-RNR2-like 5	protein-coding	14.08	0	14.5040551	3.99E-13
chr10-2379	chr10	62506061	62507061	+	17.3	1000	Intergenic	Intergenic	-13277	NM_001204403	288	Hs.499725	NM_001149	ENSG00000151150	ANK3	ANKYRIN-G|MRT37	ankyrin 3	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr10-2383	chr10	64124613	64125897	+	15.4	1284	"intron (NR_104162, intron 1 of 3)"	MER89|LTR|ERV1	-8661	NM_199450	22891	Hs.22653	NM_014951	ENSG00000138311	ZNF365	Su48|UAN|ZNF365D	zinc finger protein 365	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr10-2393	chr10	71561609	71563616	+	42.2	2007	"intron (NM_001130103, intron 1 of 39)"	CpG	968	NM_080805	1305	Hs.695934	NM_005203	ENSG00000197467	COL13A1	CMS19|COLXIIIA1	collagen type XIII alpha 1 chain	protein-coding	42.25	3.88	10.88917526	4.87E-23
chr10-2395	chr10	71692087	71693087	+	16.6	1000	"intron (NM_001130103, intron 30 of 39)"	"intron (NM_001130103, intron 30 of 39)"	-119770	NM_018649	55506	Hs.499953	NM_018649	ENSG00000099284	H2AFY2	macroH2A2	H2A histone family member Y2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr10-2397	chr10	71715326	71716326	+	14.7	1000	"intron (NM_001130103, intron 38 of 39)"	"intron (NM_001130103, intron 38 of 39)"	-96531	NM_018649	55506	Hs.499953	NM_018649	ENSG00000099284	H2AFY2	macroH2A2	H2A histone family member Y2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-2401	chr10	72225534	72228398	+	48.6	2864	Intergenic	Intergenic	-11598	NM_014431	27143	Hs.202351	NM_014431	ENSG00000107719	PALD1	KIAA1274|PALD	"phosphatase domain containing, paladin 1"	protein-coding	48.65	6.8	7.154411765	3.87E-20
chr10-2404	chr10	72550660	72551660	+	16	1000	Intergenic	L1MDa|LINE|L1	-5985	NM_001318242	219793	Hs.386698	NM_152710	ENSG00000166220	TBATA	C10orf27|SPATIAL	"thymus, brain and testes associated"	protein-coding	16	1.94	8.24742268	7.67E-08
chr10-2405	chr10	72676871	72678134	+	17.9	1263	Intergenic	Intergenic	-21308	NR_134314	105378349	Hs.119164	NR_134313	ENSG00000259267	LOC105378349	-	uncharacterized LOC105378349	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr10-2408	chr10	72804931	72806454	+	22.4	1523	Intergenic	L3b|LINE|CR1	106882	NR_134313	105378349	Hs.119164	NR_134313	ENSG00000259267	LOC105378349	-	uncharacterized LOC105378349	ncRNA	22.4	0.97	23.09278351	1.19E-17
chr10-2412	chr10	72998241	72999241	+	15.4	1000	"intron (NM_170744, intron 1 of 16)"	"intron (NM_170744, intron 1 of 16)"	-20756	NR_038453	728978	Hs.646725	NR_038453	ENSG00000237512	UNC5B-AS1	-	UNC5B antisense RNA 1	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr10-2417	chr10	73293812	73294812	+	15.4	1000	"intron (NM_052836, intron 6 of 12)"	"intron (NM_052836, intron 6 of 12)"	-22635	NR_120672	102723377	Hs.568789	NR_120672	ENSG00000223817	CDH23-AS1	C10orf106|NCRNA00223|bA327E2.3	CDH23 antisense RNA 1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr10-2424	chr10	73742122	73743122	+	16	1000	"intron (NM_004273, intron 1 of 2)"	MIRb|SINE|MIR	18502	NM_004273	9469	Hs.158304	NM_004273	ENSG00000122863	CHST3	C6ST|C6ST1|HSD	carbohydrate sulfotransferase 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr10-2425	chr10	75090246	75091246	+	16	1000	"intron (NM_145170, intron 9 of 27)"	MER81|DNA|hAT-Blackjack	27871	NM_145170	118491	Hs.591367	NM_145170	ENSG00000156042	CFAP70	TTC18	cilia and flagella associated protein 70	protein-coding	16	3.88	4.12371134	7.91E-05
chr10-2429	chr10	77052113	77057081	+	84.5	4968	"intron (NR_120651, intron 1 of 3)"	CpG	-1544	NR_038224	253264	Hs.662111	NR_038223	ENSG00000226051	ZNF503-AS1	-	ZNF503 antisense RNA 1	ncRNA	84.49	13.59	6.217071376	2.77E-30
chr10-243	chr10	64402492	64403746	+	24.3	1254	"intron (NM_199451, intron 5 of 7)"	MLT1D|LTR|ERVL-MaLR	122912	NM_199452	22891	Hs.22653	NM_014951	ENSG00000138311	ZNF365	Su48|UAN|ZNF365D	zinc finger protein 365	protein-coding	24.32	2.91	8.357388316	5.77E-12
chr10-2431	chr10	77389514	77390514	+	16	1000	"intron (NM_001305581, intron 2 of 6)"	"intron (NM_001305581, intron 2 of 6)"	-17253	NR_131178	83938	Hs.118161	NM_032024	ENSG00000148655	C10orf11	CDA017	chromosome 10 open reading frame 11	protein-coding	16	1.94	8.24742268	7.67E-08
chr10-2433	chr10	77520831	77521831	+	13.4	1000	"intron (NR_131178, intron 1 of 7)"	L1MB4|LINE|L1	-21188	NM_032024	83938	Hs.118161	NM_032024	ENSG00000148655	C10orf11	CDA017	chromosome 10 open reading frame 11	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr10-2434	chr10	77559818	77560818	+	15.4	1000	"intron (NM_032024, intron 1 of 5)"	L1MEb|LINE|L1	17799	NM_032024	83938	Hs.118161	NM_032024	ENSG00000148655	C10orf11	CDA017	chromosome 10 open reading frame 11	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr10-2435	chr10	78555350	78556350	+	15.4	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	-91952	NR_120655	101929328	Hs.664552	NR_120655	ENSG00000236467	KCNMA1-AS1	-	KCNMA1 antisense RNA 1	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr10-2436	chr10	78735695	78736695	+	15.4	1000	"intron (NM_001322838, intron 19 of 29)"	"intron (NM_001322838, intron 19 of 29)"	88393	NR_120655	101929328	Hs.664552	NR_120655	ENSG00000236467	KCNMA1-AS1	-	KCNMA1 antisense RNA 1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr10-2437	chr10	78836076	78837076	+	14.7	1000	"intron (NM_001322832, intron 13 of 27)"	"intron (NM_001322832, intron 13 of 27)"	-64013	NR_120654	101929310	Hs.666457	NR_120654	ENSG00000225497	KCNMA1-AS2	-	KCNMA1 antisense RNA 2	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr10-2438	chr10	78856501	78857501	+	15.4	1000	"intron (NM_001322832, intron 9 of 27)"	"intron (NM_001322832, intron 9 of 27)"	-43588	NR_120654	101929310	Hs.666457	NR_120654	ENSG00000225497	KCNMA1-AS2	-	KCNMA1 antisense RNA 2	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr10-2439	chr10	78916557	78917557	+	15.4	1000	"intron (NM_001322832, intron 5 of 27)"	AluSx3|SINE|Alu	16468	NR_120654	101929310	Hs.666457	NR_120654	ENSG00000225497	KCNMA1-AS2	-	KCNMA1 antisense RNA 2	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr10-2443	chr10	79258128	79259128	+	15.4	1000	"intron (NM_001322832, intron 1 of 27)"	MIR|SINE|MIR	138949	NM_001322837	3778	Hs.144795	NM_002247	ENSG00000156113	KCNMA1	BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1	potassium calcium-activated channel subfamily M alpha 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr10-2444	chr10	79271514	79272939	+	23	1425	"intron (NM_001322832, intron 1 of 27)"	MER44A|DNA|TcMar-Tigger	125351	NM_001322837	3778	Hs.144795	NM_002247	ENSG00000156113	KCNMA1	BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1	potassium calcium-activated channel subfamily M alpha 1	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr10-2445	chr10	79346470	79348041	+	25	1571	"intron (NM_001322832, intron 1 of 27)"	"intron (NM_001322832, intron 1 of 27)"	50322	NM_001322837	3778	Hs.144795	NM_002247	ENSG00000156113	KCNMA1	BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1	potassium calcium-activated channel subfamily M alpha 1	protein-coding	24.96	0.97	25.73195876	2.01E-20
chr10-2452	chr10	80271422	80273001	+	22.4	1579	Intergenic	Intergenic	245126	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA	22.4	2.43	9.218106996	2.49E-11
chr10-2453	chr10	80298416	80299416	+	16	1000	Intergenic	Intergenic	271831	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA	16	0.97	16.49484536	3.54E-11
chr10-2454	chr10	80329670	80333265	+	53.8	3595	Intergenic	Intergenic	304382	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA	53.77	7.28	7.385989011	1.41E-22
chr10-2455	chr10	80462539	80463539	+	14.7	1000	Intergenic	Intergenic	364166	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA	14.72	0	15.16333034	3.99E-13
chr10-2456	chr10	80580008	80581287	+	17.9	1279	Intergenic	MIR|SINE|MIR	246558	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA	17.92	1.46	12.2739726	2.41E-11
chr10-2458	chr10	80606711	80608448	+	24.3	1737	Intergenic	MIRb|SINE|MIR	219626	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA	24.32	2.43	10.00823045	2.59E-13
chr10-247	chr10	85741332	85742584	+	25.6	1252	Intergenic	Intergenic	-157227	NM_014394	27069	Hs.352656	NM_014394	ENSG00000165678	GHITM	DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5	growth hormone inducible transmembrane protein	protein-coding	25.6	1.94	13.19587629	4.03E-16
chr10-2476	chr10	88112787	88113787	+	15.4	1000	"intron (NM_017551, intron 2 of 15)"	"intron (NM_017551, intron 2 of 15)"	12963	NM_017551	2894	Hs.530653	NM_017551	ENSG00000182771	GRID1	GluD1	glutamate ionotropic receptor delta type subunit 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr10-2477	chr10	88131136	88132136	+	16	1000	Intergenic	Intergenic	-5386	NM_017551	2894	Hs.530653	NM_017551	ENSG00000182771	GRID1	GluD1	glutamate ionotropic receptor delta type subunit 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr10-2479	chr10	89420258	89421258	+	16	1000	"intron (NM_001015880, intron 1 of 12)"	MIR|SINE|MIR	1282	NM_001015880	9060	Hs.524491	NM_004670	ENSG00000198682	PAPSS2	ATPSK2|BCYM4|SK2	3'-phosphoadenosine 5'-phosphosulfate synthase 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr10-2481	chr10	91142726	91143726	+	16	1000	"exon (NM_001010987, exon 2 of 2)"	"exon (NM_001010987, exon 2 of 2)"	5413	NM_001010987	439996	Hs.500491	NM_001010987	ENSG00000204010	IFIT1B	IFIT1L|bA149I23.6	interferon induced protein with tetratricopeptide repeats 1B	protein-coding	16	3.88	4.12371134	7.91E-05
chr10-2482	chr10	91187362	91188362	+	16	1000	Intergenic	Intergenic	13537	NM_012420	24138	Hs.252839	NM_012420	ENSG00000152778	IFIT5	ISG58|P58|RI58	interferon induced protein with tetratricopeptide repeats 5	protein-coding	16	3.88	4.12371134	7.91E-05
chr10-2483	chr10	91596325	91598473	+	37.1	2148	"non-coding (NR_038382, exon 4 of 4)"	"non-coding (NR_038382, exon 4 of 4)"	8149	NR_038382	643529	Hs.618956	NR_038382	ENSG00000232229	LINC00865	-	long intergenic non-protein coding RNA 865	ncRNA	37.12	5.34	6.951310861	1.96E-15
chr10-2484	chr10	92355273	92356750	+	24.3	1477	Intergenic	Intergenic	-55449	NR_110657	101926942	Hs.382666	NR_110657	ENSG00000236373	LOC101926942	-	uncharacterized LOC101926942	ncRNA	24.32	0.97	25.07216495	2.01E-20
chr10-2487	chr10	92616936	92620300	+	58.2	3364	promoter-TSS (NM_019859)	promoter-TSS (NM_019859)	-947	NM_019859	3363	Hs.73739	NM_000872	ENSG00000148680	HTR7	5-HT7	5-hydroxytryptamine receptor 7	protein-coding	58.25	10.19	5.716388616	1.24E-19
chr10-2494	chr10	95085250	95086250	+	14.1	1000	"intron (NM_013451, intron 45 of 53)"	"intron (NM_013451, intron 45 of 53)"	156324	NM_133337	26509	Hs.602086	NM_013451	ENSG00000138119	MYOF	FER1L3	myoferlin	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr10-2495	chr10	95101010	95102260	+	17.3	1250	"intron (NM_013451, intron 38 of 53)"	"intron (NM_013451, intron 38 of 53)"	140439	NM_133337	26509	Hs.602086	NM_013451	ENSG00000138119	MYOF	FER1L3	myoferlin	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr10-2498	chr10	96187463	96188463	+	14.7	1000	"intron (NM_015188, intron 1 of 12)"	"intron (NM_015188, intron 1 of 12)"	25777	NM_015188	23232	Hs.500598	NM_015188	ENSG00000108239	TBC1D12	-	TBC1 domain family member 12	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr10-2501	chr10	97275261	97276261	+	14.1	1000	"intron (NM_015385, intron 1 of 24)"	"intron (NM_015385, intron 1 of 24)"	45416	NM_015385	10580	Hs.38621	NM_006434	ENSG00000095637	SORBS1	CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1	sorbin and SH3 domain containing 1	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr10-2512	chr10	99365067	99366067	+	16	1000	"intron (NM_138413, intron 6 of 6)"	L1MD1|LINE|L1	16117	NM_001009997	414157	Hs.662302	NM_001009997	ENSG00000203942	C10orf62	bA548K23.1	chromosome 10 open reading frame 62	protein-coding	16	1.46	10.95890411	3.44E-09
chr10-2518	chr10	99578445	99579445	+	14.1	1000	Intergenic	L1MEc|LINE|L1	30610	NR_108035	100505561	Hs.351904	NR_108035	ENSG00000227356	LINC00866	-	long intergenic non-protein coding RNA 866	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr10-2523	chr10	99708997	99709997	+	16	1000	"intron (NM_018058, intron 2 of 14)"	MIR|SINE|MIR	81088	NM_001206528	55118	Hs.500736	NM_018058	ENSG00000095713	CRTAC1	ASPIC|ASPIC1|CEP-68	cartilage acidic protein 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr10-2525	chr10	100026752	100029242	+	37.1	2490	promoter-TSS (NM_032211)	promoter-TSS (NM_032211)	10	NM_032211	84171	Hs.306814	NM_032211	ENSG00000138131	LOXL4	LOXC	lysyl oxidase like 4	protein-coding	37.12	4.85	7.653608247	1.78E-16
chr10-2529	chr10	101347353	101348353	+	15.4	1000	Intergenic	Intergenic	32368	NM_031212	81894	Hs.403790	NM_031212	ENSG00000155287	SLC25A28	MFRN2|MRS3/4|MRS4L|NPD016	solute carrier family 25 member 28	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-2532	chr10	102422549	102424275	+	26.9	1726	Intergenic	Intergenic	-72054	NM_001304569	5076	Hs.155644	NM_000278	ENSG00000075891	PAX2	FSGS7|PAPRS	paired box 2	protein-coding	26.88	4.37	6.151029748	1.19E-10
chr10-2534	chr10	102491642	102492642	+	15.4	1000	Intergenic	CT-rich|Low_complexity|Low_complexity	-3324	NM_001304569	5076	Hs.155644	NM_000278	ENSG00000075891	PAX2	FSGS7|PAPRS	paired box 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-2538	chr10	102515434	102519067	+	53.8	3633	"intron (NM_003989, intron 3 of 9)"	"intron (NM_003989, intron 3 of 9)"	11782	NM_003989	5076	Hs.155644	NM_000278	ENSG00000075891	PAX2	FSGS7|PAPRS	paired box 2	protein-coding	53.77	6.31	8.521394612	7.25E-25
chr10-2540	chr10	102521177	102523513	+	33.9	2336	"intron (NM_003989, intron 3 of 9)"	"intron (NM_003989, intron 3 of 9)"	16877	NM_003989	5076	Hs.155644	NM_000278	ENSG00000075891	PAX2	FSGS7|PAPRS	paired box 2	protein-coding	33.92	7.77	4.365508366	1.68E-09
chr10-2546	chr10	102578742	102581048	+	32	2306	"intron (NM_003989, intron 7 of 9)"	"intron (NM_003989, intron 7 of 9)"	74427	NM_003989	5076	Hs.155644	NM_000278	ENSG00000075891	PAX2	FSGS7|PAPRS	paired box 2	protein-coding	32	7.77	4.118404118	7.28E-09
chr10-2547	chr10	102603837	102604837	+	14.7	1000	Intergenic	L1PB1|LINE|L1	-67989	NM_001136123	55719	Hs.447458	NM_018121	ENSG00000119906	SLF2	C10orf6|FAM178A	SMC5-SMC6 complex localization factor 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-2552	chr10	102867676	102868676	+	14.7	1000	"intron (NR_130722, intron 2 of 2)"	"intron (NR_130722, intron 2 of 2)"	22727	NR_130723	100038246	Hs.368784	NM_001085398	ENSG00000236311	TLX1NB	APT-B7|TD1|TDI	TLX1 neighbor	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr10-2559	chr10	102993565	102999654	+	106.3	6089	"intron (NR_029380, intron 2 of 2)"	CpG	7258	NR_029380	399806	Hs.386143	NR_029380		LBX1-AS1	MUSE	LBX1 antisense RNA 1 (head to head)	ncRNA	106.25	13.11	8.104500381	7.23E-46
chr10-2570	chr10	106130912	106131912	+	14.1	1000	"intron (NM_001008723, intron 7 of 17)"	MIR|SINE|MIR	17890	NM_001008723	159686	Hs.253576	NM_001008723	ENSG00000120051	CFAP58	C10orf80|CCDC147|bA127L20.4|bA127L20.5|bA554P13.1	cilia and flagella associated protein 58	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr10-2571	chr10	106265856	106266856	+	16	1000	Intergenic	Intergenic	-26323	NR_120624	101927523	Hs.407539	NR_120624	ENSG00000225768	LOC101927523	-	uncharacterized LOC101927523	ncRNA	16	2.43	6.58436214	7.90E-07
chr10-2573	chr10	107462100	107463100	+	15.4	1000	"intron (NR_120625, intron 3 of 3)"	"intron (NR_120625, intron 3 of 3)"	117491	NR_120625	101927549	Hs.556885	NR_120625		LOC101927549	-	uncharacterized LOC101927549	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr10-2574	chr10	111607661	111608661	+	15.4	1000	Intergenic	Intergenic	74843	NM_001324136	7511	Hs.390623	NM_020383	ENSG00000108039	XPNPEP1	APP1|SAMP|XPNPEP|XPNPEPL|XPNPEPL1	X-prolyl aminopeptidase 1	protein-coding	15.36	0	15.82260557	1.26E-14
chr10-258	chr10	124899295	124903826	+	66.6	4531	Intergenic	Intergenic	5993	NM_001105574	340784	Hs.531194	NM_001105574	ENSG00000188620	HMX3	NKX-5.1|NKX5.1|Nkx5-1	H6 family homeobox 3	protein-coding	66.57	4.37	15.23340961	2.29E-42
chr10-2580	chr10	112271179	112272523	+	19.2	1344	TTS (NM_004419)	TTS (NM_004419)	14226	NM_004419	1847	Hs.2128	NM_004419	ENSG00000138166	DUSP5	DUSP|HVH3	dual specificity phosphatase 5	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr10-2581	chr10	112283994	112284994	+	14.7	1000	Intergenic	Intergenic	26869	NM_004419	1847	Hs.2128	NM_004419	ENSG00000138166	DUSP5	DUSP|HVH3	dual specificity phosphatase 5	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-2584	chr10	112535598	112536598	+	15.4	1000	"intron (NM_001134363, intron 1 of 13)"	MLT1D|LTR|ERVL-MaLR	94564	NR_026932	282997	Hs.599931	NR_026932		PDCD4-AS1	-	PDCD4 antisense RNA 1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr10-2594	chr10	115250637	115251637	+	16	1000	Intergenic	Intergenic	-59453	NM_001177660	3026	Hs.422542	NM_004132	ENSG00000148702	HABP2	FSAP|HABP|HGFAL|NMTC5|PHBP	hyaluronan binding protein 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr10-2599	chr10	115399997	115401251	+	20.5	1254	"intron (NM_198060, intron 13 of 41)"	L2a|LINE|L2	23205	NM_001322945	4892	Hs.268788	NM_006175	ENSG00000197893	NRAP	N-RAP	nebulin related anchoring protein	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr10-2607	chr10	115814599	115815849	+	17.9	1250	Intergenic	Intergenic	11418	NM_000684	153	Hs.99913	NM_000684	ENSG00000043591	ADRB1	ADRB1R|B1AR|BETA1AR|RHR	adrenoceptor beta 1	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr10-2608	chr10	115834442	115835442	+	16	1000	Intergenic	Intergenic	31136	NM_000684	153	Hs.99913	NM_000684	ENSG00000043591	ADRB1	ADRB1R|B1AR|BETA1AR|RHR	adrenoceptor beta 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr10-2609	chr10	116101136	116102136	+	14.7	1000	"intron (NM_001001936, intron 1 of 18)"	MER50|LTR|ERV1	62901	NM_001001936	84632	Hs.501106	NM_032550	ENSG00000169129	AFAP1L2	CTB-1144G6.4|KIAA1914|XB130	actin filament associated protein 1 like 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-2610	chr10	116123491	116124491	+	14.7	1000	"intron (NM_001001936, intron 1 of 18)"	"intron (NM_001001936, intron 1 of 18)"	40546	NM_001001936	84632	Hs.501106	NM_032550	ENSG00000169129	AFAP1L2	CTB-1144G6.4|KIAA1914|XB130	actin filament associated protein 1 like 2	protein-coding	14.72	0	15.16333034	3.99E-13
chr10-2611	chr10	116154856	116156177	+	21.8	1321	"intron (NM_001001936, intron 1 of 18)"	"intron (NM_001001936, intron 1 of 18)"	9021	NM_001001936	84632	Hs.501106	NM_032550	ENSG00000169129	AFAP1L2	CTB-1144G6.4|KIAA1914|XB130	actin filament associated protein 1 like 2	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr10-2615	chr10	118377797	118378797	+	16.6	1000	Intergenic	L1ME3|LINE|L1	-2168	NR_103727	5408	Hs.423598	NM_005396	ENSG00000266200	PNLIPRP2	PLRP2	pancreatic lipase related protein 2 (gene/pseudogene)	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr10-2616	chr10	118389052	118390052	+	14.7	1000	"exon (NM_005396, exon 8 of 14)"	"exon (NM_005396, exon 8 of 14)"	9087	NM_005396	5408	Hs.423598	NM_005396	ENSG00000266200	PNLIPRP2	PLRP2	pancreatic lipase related protein 2 (gene/pseudogene)	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr10-2618	chr10	118539889	118540889	+	16	1000	"intron (NM_001330164, intron 2 of 12)"	Charlie4a|DNA|hAT-Charlie	-38304	NM_025015	259217	Hs.648448	NM_025015	ENSG00000165868	HSPA12A	-	heat shock protein family A (Hsp70) member 12A	protein-coding	16	1.94	8.24742268	7.67E-08
chr10-262	chr10	131076746	131078264	+	28.8	1518	Intergenic	AluSx1|SINE|Alu	-187943	NM_002412	4255	Hs.501522	NM_002412	ENSG00000170430	MGMT	-	O-6-methylguanine-DNA methyltransferase	protein-coding	28.8	5.82	4.948453608	3.50E-09
chr10-2622	chr10	118981243	118982243	+	15.4	1000	Intergenic	Intergenic	-18841	NM_003054	6571	Hs.596992	NM_003054	ENSG00000165646	SLC18A2	SVAT|SVMT|VAT2|VMAT2	solute carrier family 18 member A2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-2626	chr10	119162025	119164947	+	38.4	2922	Intergenic	AluSx1|SINE|Alu	-28508	NM_173791	118987	Hs.501149	NM_173791	ENSG00000165650	PDZD8	PDZK8	PDZ domain containing 8	protein-coding	38.4	6.31	6.085578447	1.96E-14
chr10-2633	chr10	119304182	119308912	+	80.7	4730	"intron (NM_004098, intron 2 of 2)"	"intron (NM_004098, intron 2 of 2)"	-1968	NR_002791	196047	Hs.312592	NR_002791	ENSG00000229847	EMX2OS	EMX2-AS1|NCRNA00045	EMX2 opposite strand/antisense RNA	ncRNA	80.65	13.59	5.93451067	6.41E-28
chr10-2634	chr10	119416332	119417669	+	20.5	1337	Intergenic	HAL1b|LINE|L1	-112421	NR_002791	196047	Hs.312592	NR_002791	ENSG00000229847	EMX2OS	EMX2-AS1|NCRNA00045	EMX2 opposite strand/antisense RNA	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr10-2636	chr10	119503099	119504099	+	15.4	1000	Intergenic	Intergenic	-199020	NR_002791	196047	Hs.312592	NR_002791	ENSG00000229847	EMX2OS	EMX2-AS1|NCRNA00045	EMX2 opposite strand/antisense RNA	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr10-2640	chr10	119616823	119617823	+	14.7	1000	Intergenic	Intergenic	188791	NM_014904	22841	Hs.173656	NM_014904	ENSG00000107560	RAB11FIP2	Rab11-FIP2|nRip11	RAB11 family interacting protein 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-2641	chr10	119953560	119954560	+	15.4	1000	"intron (NR_026940, intron 3 of 3)"	L1ME4a|LINE|L1	-147665	NM_001330167	22841	Hs.173656	NM_014904	ENSG00000107560	RAB11FIP2	Rab11-FIP2|nRip11	RAB11 family interacting protein 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr10-2642	chr10	120180117	120181117	+	15.4	1000	Intergenic	MER58D|DNA|hAT-Charlie	63997	NR_108045	100506126	Hs.69494	NR_108045	ENSG00000232139	LINC00867	-	long intergenic non-protein coding RNA 867	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr10-2643	chr10	120251365	120252365	+	15.4	1000	Intergenic	Intergenic	103295	NM_004248	2834	Hs.248119	NM_004248	ENSG00000119973	PRLHR	GPR10|GR3|PrRPR	prolactin releasing hormone receptor	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr10-2647	chr10	120758387	120759387	+	16	1000	Intergenic	MLT1G1|LTR|ERVL-MaLR	-30341	NM_199461	340719	Hs.591918	NM_199461	ENSG00000188613	NANOS1	EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A	nanos C2HC-type zinc finger 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr10-2648	chr10	121078246	121079805	+	24.3	1559	"intron (NM_005308, intron 1 of 15)"	"intron (NM_005308, intron 1 of 15)"	-58459	NR_039829	100616398		NR_039829	ENSG00000265719	MIR4681	-	microRNA 4681	ncRNA	24.32	3.88	6.268041237	6.68E-10
chr10-2651	chr10	122285437	122286437	+	16	1000	"intron (NM_001030059, intron 5 of 6)"	HAL1|LINE|L1	69471	NM_001318169	196051	Hs.40479	NM_001030059	ENSG00000203805	PLPP4	DPPL2|PPAPDC1|PPAPDC1A	phospholipid phosphatase 4	protein-coding	16	2.43	6.58436214	7.90E-07
chr10-2655	chr10	122530631	122531915	+	21.1	1284	"intron (NR_033850, intron 2 of 2)"	MER50|LTR|ERV1	-79414	NM_018117	55717	Hs.144447	NM_018117	ENSG00000120008	WDR11	BRWD2|DR11|HH14|SRI1|WDR15	WD repeat domain 11	protein-coding	21.12	2.43	8.691358025	2.25E-10
chr10-2656	chr10	122560318	122561318	+	15.4	1000	"intron (NR_033850, intron 1 of 2)"	MER4D1|LTR|ERV1	-49869	NM_018117	55717	Hs.144447	NM_018117	ENSG00000120008	WDR11	BRWD2|DR11|HH14|SRI1|WDR15	WD repeat domain 11	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr10-2657	chr10	122571878	122572878	+	16	1000	"intron (NR_033850, intron 1 of 2)"	L1ME3C|LINE|L1	-38309	NM_018117	55717	Hs.144447	NM_018117	ENSG00000120008	WDR11	BRWD2|DR11|HH14|SRI1|WDR15	WD repeat domain 11	protein-coding	16	2.91	5.498281787	4.98E-06
chr10-2658	chr10	123074617	123075617	+	15.4	1000	Intergenic	Intergenic	215711	NM_001320654	2263	Hs.533683	NM_000141	ENSG00000066468	FGFR2	BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25	fibroblast growth factor receptor 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr10-2660	chr10	123168882	123169882	+	15.4	1000	Intergenic	L2c|LINE|L2	121446	NM_001320654	2263	Hs.533683	NM_000141	ENSG00000066468	FGFR2	BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25	fibroblast growth factor receptor 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr10-2661	chr10	123240321	123241321	+	15.4	1000	TTS (NM_001144919)	TTS (NM_001144919)	50007	NM_001320654	2263	Hs.533683	NM_000141	ENSG00000066468	FGFR2	BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25	fibroblast growth factor receptor 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-2662	chr10	123921063	123923731	+	37.1	2668	promoter-TSS (NM_006997)	promoter-TSS (NM_006997)	-544	NM_206860	10579	Hs.501252	NM_006997	ENSG00000138162	TACC2	AZU-1|ECTACC	transforming acidic coiled-coil containing protein 2	protein-coding	37.12	2.91	12.75601375	2.83E-22
chr10-2663	chr10	123930099	123931099	+	15.4	1000	"intron (NM_001291878, intron 1 of 16)"	"intron (NM_001291878, intron 1 of 16)"	7658	NM_006997	10579	Hs.501252	NM_006997	ENSG00000138162	TACC2	AZU-1|ECTACC	transforming acidic coiled-coil containing protein 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr10-2664	chr10	123973247	123974247	+	14.7	1000	"intron (NM_001291878, intron 4 of 16)"	"intron (NM_001291878, intron 4 of 16)"	50806	NM_006997	10579	Hs.501252	NM_006997	ENSG00000138162	TACC2	AZU-1|ECTACC	transforming acidic coiled-coil containing protein 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-2665	chr10	124260010	124261327	+	17.9	1317	"intron (NM_002775, intron 3 of 8)"	"intron (NM_002775, intron 3 of 8)"	39627	NM_002775	5654	Hs.501280	NM_002775	ENSG00000166033	HTRA1	ARMD7|CADASIL2|CARASIL|HtrA|L56|ORF480|PRSS11	HtrA serine peptidase 1	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr10-2666	chr10	124828760	124829760	+	15.4	1000	Intergenic	Intergenic	60831	NM_001330174	36	Hs.81934	NM_001609	ENSG00000196177	ACADSB	2-MEBCAD|ACAD7|SBCAD	"acyl-CoA dehydrogenase, short/branched chain"	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr10-2667	chr10	125107366	125108366	+	14.7	1000	Intergenic	Intergenic	194106	NM_004725	9184	Hs.418533	NM_004725	ENSG00000154473	BUB3	BUB3L|hBUB3	"BUB3, mitotic checkpoint protein"	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr10-2670	chr10	125510078	125511939	+	27.5	1861	"intron (NM_198148, intron 13 of 13)"	LTR22C|LTR|ERVK	85137	NM_153442	2849	Hs.12751	NM_153442	ENSG00000154478	GPR26	-	G protein-coupled receptor 26	protein-coding	27.52	5.34	5.153558052	3.94E-09
chr10-2671	chr10	125517114	125518982	+	28.8	1868	"intron (NM_198148, intron 11 of 13)"	MLT1D|LTR|ERVL-MaLR	92177	NM_153442	2849	Hs.12751	NM_153442	ENSG00000154478	GPR26	-	G protein-coupled receptor 26	protein-coding	28.8	6.8	4.235294118	5.07E-08
chr10-2672	chr10	125711138	125712138	+	14.1	1000	Intergenic	Intergenic	-60138	NM_198148	119587	Hs.656887	NM_198148	ENSG00000121898	CPXM2	CPX2|UNQ676	"carboxypeptidase X, M14 family member 2"	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr10-2676	chr10	126131243	126132243	+	15.4	1000	Intergenic	AluSg|SINE|Alu	6807	NM_001146340	390010	Hs.712041	NM_001146340	ENSG00000229544	NKX1-2	C10orf121|NKX-1.1|bB238F13.2	NK1 homeobox 2	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr10-2678	chr10	126247872	126248872	+	15.4	1000	"intron (NM_022126, intron 6 of 6)"	"intron (NM_022126, intron 6 of 6)"	98031	NM_001318332	64077	Hs.527748	NM_022126	ENSG00000107902	LHPP	HDHD2B	phospholysine phosphohistidine inorganic pyrophosphate phosphatase	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr10-268	chr10	31989217	31990217	+	20.5	1000	Intergenic	Intergenic	208137	NM_001270699	94134	Hs.499264	NM_018287	ENSG00000165322	ARHGAP12	-	Rho GTPase activating protein 12	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr10-2682	chr10	126742649	126744496	+	31.4	1847	"intron (NM_001321013, intron 1 of 9)"	"intron (NM_001321013, intron 1 of 9)"	-22133	NR_036178	100423041		NR_036178	ENSG00000264572	MIR4296	-	microRNA 4296	ncRNA	31.36	2.91	10.7766323	6.73E-17
chr10-2684	chr10	126842733	126844076	+	21.8	1343	"intron (NM_001290214, intron 1 of 10)"	"intron (NM_001290214, intron 1 of 10)"	4283	NM_001290215	1488	Hs.501345	NM_001329	ENSG00000175029	CTBP2	-	C-terminal binding protein 2	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr10-2691	chr10	127565954	127566954	+	15.4	1000	"intron (NM_018180, intron 1 of 10)"	"intron (NM_018180, intron 1 of 10)"	3430	NM_018180	55760	Hs.370292	NM_018180	ENSG00000089876	DHX32	DDX32|DHLP1	DEAH-box helicase 32 (putative)	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr10-2694	chr10	127786464	127787464	+	15.4	1000	"intron (NM_003474, intron 10 of 22)"	"intron (NM_003474, intron 10 of 22)"	-125122	NR_102707	101410540	Hs.557889	NR_102707	ENSG00000233409	FANK1-AS1	-	FANK1 antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr10-2695	chr10	128942257	128943889	+	30.7	1632	"intron (NM_001039762, intron 5 of 5)"	"intron (NM_001039762, intron 5 of 5)"	51349	NM_001039762	642938	Hs.613882	NM_001039762	ENSG00000188916	FAM196A	C10orf141|INSYN2	family with sequence similarity 196 member A	protein-coding	30.72	5.82	5.278350515	1.29E-10
chr10-2696	chr10	128958398	128959715	+	23	1317	"intron (NM_001039762, intron 4 of 5)"	"intron (NM_001039762, intron 4 of 5)"	35366	NM_001039762	642938	Hs.613882	NM_001039762	ENSG00000188916	FAM196A	C10orf141|INSYN2	family with sequence similarity 196 member A	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr10-2700	chr10	129120671	129122549	+	29.4	1878	"intron (NM_001380, intron 29 of 51)"	"intron (NM_001380, intron 29 of 51)"	-127188	NM_001039762	642938	Hs.613882	NM_001039762	ENSG00000188916	FAM196A	C10orf141|INSYN2	family with sequence similarity 196 member A	protein-coding	29.44	5.34	5.513108614	1.33E-10
chr10-2702	chr10	129167151	129168151	+	15.4	1000	"intron (NM_001380, intron 33 of 51)"	"intron (NM_001380, intron 33 of 51)"	-173229	NM_001039762	642938	Hs.613882	NM_001039762	ENSG00000188916	FAM196A	C10orf141|INSYN2	family with sequence similarity 196 member A	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr10-2704	chr10	129290526	129291526	+	14.7	1000	Intergenic	MIR|SINE|MIR	-56587	NM_001030013	594857	Hs.643423	NM_001030013	ENSG00000214285	NPS	-	neuropeptide S	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr10-2707	chr10	129726922	129727922	+	16	1000	"intron (NM_001323356, intron 1 of 19)"	"intron (NM_001323356, intron 1 of 19)"	22097	NM_001316676	5791	Hs.127022	NM_006504	ENSG00000132334	PTPRE	HPTPE|PTPE|R-PTP-EPSILON	"protein tyrosine phosphatase, receptor type E"	protein-coding	16	1.46	10.95890411	3.44E-09
chr10-2708	chr10	129794874	129796712	+	31.4	1838	promoter-TSS (NM_001323354)	promoter-TSS (NM_001323354)	-597	NM_001323354	5791	Hs.127022	NM_006504	ENSG00000132334	PTPRE	HPTPE|PTPE|R-PTP-EPSILON	"protein tyrosine phosphatase, receptor type E"	protein-coding	31.36	5.82	5.388316151	1.29E-10
chr10-2709	chr10	130060292	130061945	+	24.3	1653	Intergenic	Intergenic	-23096	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	24.32	5.82	4.178694158	3.56E-07
chr10-2712	chr10	130501196	130502196	+	16	1000	Intergenic	Intergenic	417482	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	16	0.97	16.49484536	3.54E-11
chr10-2713	chr10	130524402	130527997	+	57.6	3595	Intergenic	Intergenic	441985	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	57.61	13.59	4.239146431	3.92E-15
chr10-2715	chr10	130734581	130735581	+	15.4	1000	Intergenic	Charlie25|DNA|hAT-Charlie	-530367	NM_002412	4255	Hs.501522	NM_002412	ENSG00000170430	MGMT	-	O-6-methylguanine-DNA methyltransferase	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr10-2719	chr10	131225204	131226204	+	14.7	1000	Intergenic	Intergenic	-39744	NM_002412	4255	Hs.501522	NM_002412	ENSG00000170430	MGMT	-	O-6-methylguanine-DNA methyltransferase	protein-coding	14.72	0	15.16333034	3.99E-13
chr10-2723	chr10	132293400	132294400	+	15.4	1000	Intergenic	Intergenic	359227	NM_001321980	10539	Hs.42644	NM_006541	ENSG00000108010	GLRX3	GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3	glutaredoxin 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr10-2724	chr10	132301536	132302536	+	14.7	1000	Intergenic	L1MD1|LINE|L1	367363	NM_001321980	10539	Hs.42644	NM_006541	ENSG00000108010	GLRX3	GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3	glutaredoxin 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-2725	chr10	132354759	132357591	+	34.6	2832	Intergenic	MLT1J2|LTR|ERVL-MaLR	404756	NR_036180	100422867		NR_036180	ENSG00000264803	MIR378C	mir-378c	microRNA 378c	ncRNA	34.56	3.88	8.907216495	5.09E-17
chr10-2729	chr10	132675680	132677253	+	28.8	1573	Intergenic	ERVL-E-int|LTR|ERVL	84465	NR_036180	100422867		NR_036180	ENSG00000264803	MIR378C	mir-378c	microRNA 378c	ncRNA	28.8	4.85	5.93814433	1.30E-10
chr10-2730	chr10	132799473	132800473	+	14.1	1000	Intergenic	MER5B|DNA|hAT-Charlie	-39042	NR_036180	100422867		NR_036180	ENSG00000264803	MIR378C	mir-378c	microRNA 378c	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr10-2731	chr10	133062457	133065640	+	36.5	3183	"intron (NM_174937, intron 3 of 11)"	Tigger1|DNA|TcMar-Tigger	45936	NM_174937	256536	Hs.126575	NM_174937	ENSG00000176769	TCERG1L	-	transcription elongation regulator 1 like	protein-coding	36.48	2.91	12.53608247	3.62E-21
chr10-2734	chr10	133541993	133542993	+	14.1	1000	Intergenic	Intergenic	80042	NR_038365	399827	Hs.523353	NM_001001677	ENSG00000189275	LINC01164	-	long intergenic non-protein coding RNA 1164	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr10-2740	chr10	134208259	134210305	+	40.3	2046	Intergenic	Intergenic	-1420	NM_138499	170394	Hs.527751	NM_138499	ENSG00000171813	PWWP2B	PWWP2|bA432J24.1|pp8607	PWWP domain containing 2B	protein-coding	40.33	2.91	13.85910653	1.57E-24
chr10-2741	chr10	134280578	134281578	+	15.4	1000	Intergenic	Intergenic	22364	NM_173541	170393	Hs.375059	NM_173541		C10orf91	bA432J24.4	chromosome 10 open reading frame 91	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr10-2744	chr10	134662467	134663854	+	16.6	1387	"intron (NM_001200049, intron 41 of 57)"	"intron (NM_001200049, intron 41 of 57)"	-63623	NM_177400	84504	Hs.134013	NM_177400	ENSG00000148826	NKX6-2	GTX|NKX6.2|NKX6B	NK6 homeobox 2	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr10-2746	chr10	134692920	134693920	+	15.4	1000	"intron (NM_001200049, intron 28 of 57)"	"intron (NM_001200049, intron 28 of 57)"	62669	NM_001200049	54777	Hs.298038	NM_017609	ENSG00000171811	CFAP46	C10orf123|C10orf124|C10orf92|C10orf93|TTC40|bA288G11.4|bA288G11.5|bB137A17.2|bB137A17.3	cilia and flagella associated protein 46	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr10-2747	chr10	134775367	134777781	+	37.1	2414	promoter-TSS (NR_125763)	promoter-TSS (NR_125763)	-833	NR_125763	103695432	Hs.680406	NR_125763	ENSG00000224758	LINC01167	TCONS_00018075	long intergenic non-protein coding RNA 1167	ncRNA	37.12	7.28	5.098901099	3.68E-12
chr10-2750	chr10	134956295	134957295	+	14.1	1000	Intergenic	Intergenic	-17163	NM_001347865	85442	Hs.530685	NM_152643	ENSG00000171798	KNDC1	C10orf23|RASGEF2|bB439H18.3	kinase non-catalytic C-lobe domain containing 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr10-2754	chr10	335198	336198	+	14.1	1000	"intron (NM_014974, intron 32 of 36)"	"intron (NM_014974, intron 32 of 36)"	-7672	NR_106988	102465753		NR_106988	ENSG00000280494	MIR7641-2	B-ATF|hsa-mir-7641-2	microRNA 7641-2	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr10-2759	chr10	503368	506601	+	46.7	3233	"intron (NM_014974, intron 3 of 36)"	Charlie1b|DNA|hAT-Charlie	-176958	NR_106988	102465753		NR_106988	ENSG00000280494	MIR7641-2	B-ATF|hsa-mir-7641-2	microRNA 7641-2	ncRNA	46.73	4.37	10.69336384	1.51E-24
chr10-2761	chr10	615770	616770	+	15.4	1000	"intron (NM_014974, intron 1 of 36)"	"intron (NM_014974, intron 1 of 36)"	71448	NR_049884	100847086		NR_049884	ENSG00000263511	MIR5699	mir-5699	microRNA 5699	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr10-2763	chr10	681578	684243	+	37.1	2665	"intron (NM_014974, intron 1 of 36)"	"intron (NM_014974, intron 1 of 36)"	4808	NR_049884	100847086		NR_049884	ENSG00000263511	MIR5699	mir-5699	microRNA 5699	ncRNA	37.12	7.28	5.098901099	3.68E-12
chr10-2764	chr10	799425	800425	+	14.1	1000	Intergenic	Intergenic	-64317	NM_014974	22982	Hs.432397	NM_014974	ENSG00000151240	DIP2C	KIAA0934	disco interacting protein 2 homolog C	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr10-2765	chr10	1001982	1002982	+	15.4	1000	Intergenic	AluY|SINE|Alu	23516	NR_120629	101927762	Hs.151159	NR_120629	ENSG00000229869	LOC101927762	-	uncharacterized LOC101927762	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr10-2768	chr10	1221403	1222403	+	14.1	1000	Intergenic	Intergenic	16195	NR_015376	399706	Hs.721191	NM_001010910	ENSG00000229205	LINC00200	C10orf139|NCRNA00200	long intergenic non-protein coding RNA 200	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr10-2769	chr10	1232749	1233749	+	12.8	1000	"intron (NM_018702, intron 8 of 9)"	"intron (NM_018702, intron 8 of 9)"	27541	NR_015376	399706	Hs.721191	NM_001010910	ENSG00000229205	LINC00200	C10orf139|NCRNA00200	long intergenic non-protein coding RNA 200	ncRNA	12.8	0	13.18550464	1.16E-11
chr10-2774	chr10	1508816	1511197	+	36.5	2381	"intron (NM_018702, intron 1 of 9)"	"intron (NM_018702, intron 1 of 9)"	-58819	NR_033387	642394	Hs.568831	NM_001098830	ENSG00000205696	ADARB2-AS1	C10orf109|NCRNA00168|bA466B20.1	ADARB2 antisense RNA 1	ncRNA	36.48	3.88	9.402061856	5.49E-18
chr10-2776	chr10	1528918	1529918	+	15.4	1000	"intron (NM_018702, intron 1 of 9)"	"intron (NM_018702, intron 1 of 9)"	-39407	NR_033387	642394	Hs.568831	NM_001098830	ENSG00000205696	ADARB2-AS1	C10orf109|NCRNA00168|bA466B20.1	ADARB2 antisense RNA 1	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr10-2777	chr10	1557307	1559023	+	28.2	1716	"intron (NM_018702, intron 1 of 9)"	"intron (NM_018702, intron 1 of 9)"	-10660	NR_033387	642394	Hs.568831	NM_001098830	ENSG00000205696	ADARB2-AS1	C10orf109|NCRNA00168|bA466B20.1	ADARB2 antisense RNA 1	ncRNA	28.16	1.46	19.28767123	5.10E-21
chr10-2781	chr10	1710964	1711964	+	14.7	1000	"intron (NM_018702, intron 1 of 9)"	"intron (NM_018702, intron 1 of 9)"	68206	NM_018702	105	Hs.586663	NM_018702	ENSG00000185736	ADARB2	ADAR3|RED2	"adenosine deaminase, RNA specific B2 (inactive)"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-2785	chr10	1897756	1898756	+	14.7	1000	Intergenic	Intergenic	-118586	NM_018702	105	Hs.586663	NM_018702	ENSG00000185736	ADARB2	ADAR3|RED2	"adenosine deaminase, RNA specific B2 (inactive)"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-2787	chr10	1921958	1922958	+	14.7	1000	Intergenic	Intergenic	134084	NR_040253	282980	Hs.576810	NR_040253	ENSG00000234962	LINC00700	-	long intergenic non-protein coding RNA 700	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr10-2791	chr10	2471786	2472786	+	15.4	1000	Intergenic	MIRc|SINE|MIR	71368	NR_136146	105376351	Hs.343482	NR_136146		LOC105376351	-	uncharacterized LOC105376351	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr10-2794	chr10	2814882	2815882	+	14.7	1000	Intergenic	CpG	-271728	NR_136146	105376351	Hs.343482	NR_136146		LOC105376351	-	uncharacterized LOC105376351	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr10-2796	chr10	3053805	3054805	+	15.4	1000	Intergenic	MLT1A0|LTR|ERVL-MaLR	-55407	NM_002627	5214	Hs.26010	NM_002627	ENSG00000067057	PFKP	ATP-PFK|PFK-C|PFK-P|PFKF	"phosphofructokinase, platelet"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr10-2797	chr10	3062645	3064406	+	23.7	1761	Intergenic	Intergenic	-46187	NM_002627	5214	Hs.26010	NM_002627	ENSG00000067057	PFKP	ATP-PFK|PFK-C|PFK-P|PFKF	"phosphofructokinase, platelet"	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr10-2801	chr10	3088408	3089408	+	14.7	1000	Intergenic	Intergenic	-20804	NM_002627	5214	Hs.26010	NM_002627	ENSG00000067057	PFKP	ATP-PFK|PFK-C|PFK-P|PFKF	"phosphofructokinase, platelet"	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr10-2807	chr10	3708168	3709495	+	16	1327	"intron (NR_131187, intron 1 of 1)"	"intron (NR_131187, intron 1 of 1)"	118642	NM_001300	1316	Hs.4055	NM_001300	ENSG00000067082	KLF6	BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9	Kruppel like factor 6	protein-coding	16	3.88	4.12371134	7.91E-05
chr10-2810	chr10	3862908	3863908	+	13.4	1000	Intergenic	Intergenic	-12734	NR_134490	105376365	Hs.460114	NR_134490	ENSG00000230573	LOC105376365	-	uncharacterized LOC105376365	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr10-2812	chr10	3913524	3914524	+	15.4	1000	Intergenic	MLT1A|LTR|ERVL-MaLR	37882	NR_134490	105376365	Hs.460114	NR_134490	ENSG00000230573	LOC105376365	-	uncharacterized LOC105376365	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr10-2814	chr10	4865610	4866610	+	14.7	1000	Intergenic	L1MC|LINE|L1	-2259	NM_001271021	83592	Hs.657944	NM_031436	ENSG00000165568	AKR1E2	AKR1CL2|AKRDC1|LoopADR|hTSP|htAKR	aldo-keto reductase family 1 member E2	protein-coding	14.72	0	15.16333034	3.99E-13
chr10-2824	chr10	5603166	5605851	+	41.6	2685	Intergenic	Intergenic	33573	NR_134491	105376382	Hs.460282	NR_134491	ENSG00000242147	LOC105376382	-	uncharacterized LOC105376382	ncRNA	41.61	2.43	17.12345679	4.69E-28
chr10-2825	chr10	5622563	5624978	+	30.7	2415	Intergenic	Intergenic	14311	NR_134491	105376382	Hs.460282	NR_134491	ENSG00000242147	LOC105376382	-	uncharacterized LOC105376382	ncRNA	30.72	6.8	4.517647059	2.53E-09
chr10-2827	chr10	5870299	5871299	+	14.1	1000	Intergenic	Intergenic	-15287	NM_001494	2665	Hs.299055	NM_001494	ENSG00000057608	GDI2	HEL-S-46e|RABGDIB	GDP dissociation inhibitor 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr10-2828	chr10	6068627	6069627	+	14.7	1000	"intron (NM_001308242, intron 1 of 6)"	AluSx3|SINE|Alu	35206	NM_001308243	3559	Hs.231367	NM_000417	ENSG00000134460	IL2RA	CD25|IDDM10|IL2R|IMD41|TCGFR|p55	interleukin 2 receptor subunit alpha	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-2829	chr10	6080275	6081547	+	19.8	1272	"intron (NM_001308242, intron 1 of 6)"	L1MEe|LINE|L1	23422	NM_001308243	3559	Hs.231367	NM_000417	ENSG00000134460	IL2RA	CD25|IDDM10|IL2R|IMD41|TCGFR|p55	interleukin 2 receptor subunit alpha	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr10-284	chr10	71626773	71627773	+	21.8	1000	"intron (NM_080798, intron 3 of 34)"	"intron (NM_080798, intron 3 of 34)"	65629	NM_080805	1305	Hs.695934	NM_005203	ENSG00000197467	COL13A1	CMS19|COLXIIIA1	collagen type XIII alpha 1 chain	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr10-2854	chr10	10991307	10992307	+	15.4	1000	"intron (NR_024410, intron 1 of 4)"	AluSz6|SINE|Alu	2319	NR_024410	254312	Hs.498620	NR_015413	ENSG00000229240	LINC00710	-	long intergenic non-protein coding RNA 710	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr10-2855	chr10	10998532	10999532	+	15.4	1000	"intron (NM_001326319, intron 4 of 16)"	L3|LINE|CR1	-4906	NR_015413	254312	Hs.498620	NR_015413	ENSG00000229240	LINC00710	-	long intergenic non-protein coding RNA 710	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr10-286	chr10	72972222	72973222	+	21.8	1000	"5' UTR (NM_001244889, exon 1 of 16)"	"5' UTR (NM_001244889, exon 1 of 16)"	430	NM_170744	219699	Hs.522997	NM_170744	ENSG00000107731	UNC5B	UNC5H2|p53RDL1	unc-5 netrin receptor B	protein-coding	21.76	0	22.41535789	1.33E-22
chr10-2860	chr10	11920096	11922296	+	38.4	2200	"intron (NR_038222, intron 2 of 5)"	(CCAA)n|Simple_repeat|Simple_repeat	15513	NR_038222	219731	Hs.576787	NR_038222	ENSG00000225778	PROSER2-AS1	-	PROSER2 antisense RNA 1	ncRNA	38.4	4.85	7.917525773	2.24E-17
chr10-2861	chr10	11939377	11940377	+	14.1	1000	Intergenic	Intergenic	-3168	NR_038222	219731	Hs.576787	NR_038222	ENSG00000225778	PROSER2-AS1	-	PROSER2 antisense RNA 1	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr10-2867	chr10	13524586	13526143	+	25	1557	"intron (NM_001100912, intron 4 of 7)"	"intron (NM_001100912, intron 4 of 7)"	19612	NM_001100912	222389	Hs.498740	NM_152751	ENSG00000165626	BEND7	C10orf30	BEN domain containing 7	protein-coding	24.96	1.94	12.86597938	5.33E-15
chr10-2872	chr10	13747940	13751368	+	45.4	3428	promoter-TSS (NM_001318338)	promoter-TSS (NM_001318338)	-87	NM_001318338	55691	Hs.330463	NM_018027	ENSG00000151474	FRMD4A	CCAFCA|FRMD4|bA295P9.4	FERM domain containing 4A	protein-coding	45.45	8.74	5.200228833	2.02E-14
chr10-2874	chr10	13785267	13787696	+	38.4	2429	"intron (NM_018027, intron 9 of 24)"	"intron (NM_018027, intron 9 of 24)"	-36914	NM_001318338	55691	Hs.330463	NM_018027	ENSG00000151474	FRMD4A	CCAFCA|FRMD4|bA295P9.4	FERM domain containing 4A	protein-coding	38.4	8.74	4.393592677	5.52E-11
chr10-2878	chr10	14320338	14321338	+	15.4	1000	"intron (NR_134578, intron 2 of 3)"	"intron (NR_134578, intron 2 of 3)"	52045	NR_134578	55691	Hs.330463	NM_018027	ENSG00000151474	FRMD4A	CCAFCA|FRMD4|bA295P9.4	FERM domain containing 4A	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-2880	chr10	15407765	15408765	+	14.1	1000	"intron (NM_001010924, intron 1 of 7)"	AluSx1|SINE|Alu	4793	NM_001010924	221061	Hs.66762	NM_001010924	ENSG00000148468	FAM171A1	C10orf38	family with sequence similarity 171 member A1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr10-2884	chr10	15909140	15910140	+	14.7	1000	Intergenic	MER44A|DNA|TcMar-Tigger	-7108	NM_024948	80013	Hs.158870	NM_024948	ENSG00000148481	FAM188A	C10orf97|CARP|DERP5|MST126|MSTP126|my042	family with sequence similarity 188 member A	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-2886	chr10	17309209	17310209	+	15.4	1000	Intergenic	Intergenic	-37725	NR_108061	100507347	Hs.740502	NR_108060	ENSG00000229124	VIM-AS1	-	VIM antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr10-2889	chr10	21171532	21172532	+	14.7	1000	"intron (NM_006393, intron 4 of 27)"	L3|LINE|CR1	14499	NM_006393	10529	Hs.5025	NM_006393	ENSG00000078114	NEBL	LASP2|LNEBL	nebulette	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-2898	chr10	23981582	23984255	+	49.3	2673	promoter-TSS (NM_001098500)	promoter-TSS (NM_001098500)	-757	NM_001098500	56243	Hs.445885	NM_019590	ENSG00000120549	KIAA1217	SKT	KIAA1217	protein-coding	49.29	7.77	6.343629344	2.96E-18
chr10-2899	chr10	24003416	24004416	+	14.1	1000	"intron (NM_001098500, intron 1 of 18)"	LTR47B|LTR|ERVL	20241	NM_001098500	56243	Hs.445885	NM_019590	ENSG00000120549	KIAA1217	SKT	KIAA1217	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr10-2900	chr10	24495216	24496216	+	15.4	1000	"intron (NM_001098500, intron 2 of 18)"	"intron (NM_001098500, intron 2 of 18)"	-2004	NM_001282767	56243	Hs.445885	NM_019590	ENSG00000120549	KIAA1217	SKT	KIAA1217	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr10-2902	chr10	24744003	24745003	+	13.4	1000	"intron (NM_001282769, intron 1 of 13)"	"intron (NM_001282769, intron 1 of 13)"	6141	NM_001321681	56243	Hs.445885	NM_019590	ENSG00000120549	KIAA1217	SKT	KIAA1217	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr10-2904	chr10	25443120	25444120	+	14.7	1000	"intron (NR_120649, intron 6 of 7)"	L1ME3F|LINE|L1	-20670	NM_020752	57512	Hs.499108	NM_020752	ENSG00000151025	GPR158	-	G protein-coupled receptor 158	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-2910	chr10	28966756	28969841	+	38.4	3085	"intron (NM_012342, intron 1 of 2)"	"intron (NM_012342, intron 1 of 2)"	1874	NM_012342	25805	Hs.533336	NM_012342	ENSG00000095739	BAMBI	NMA	BMP and activin membrane bound inhibitor	protein-coding	38.4	5.82	6.597938144	2.56E-15
chr10-2912	chr10	29169640	29170640	+	14.1	1000	"3' UTR (NM_001278522, exon 5 of 5)"	"3' UTR (NM_001278522, exon 5 of 5)"	34803	NM_001278522	283080		NM_001278522		C10orf126	bA492M23.1	chromosome 10 open reading frame 126	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr10-2913	chr10	29216894	29217894	+	15.4	1000	Intergenic	AluJr4|SINE|Alu	82057	NM_001278522	283080		NM_001278522		C10orf126	bA492M23.1	chromosome 10 open reading frame 126	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-2914	chr10	29572782	29574262	+	22.4	1480	Intergenic	L1MC3|LINE|L1	-4468	NM_032517	84569	Hs.558572	NM_032517	ENSG00000120563	LYZL1	KAAG648|LYC2|LYZD1|PRO1278|bA534G20.1	lysozyme like 1	protein-coding	22.4	2.43	9.218106996	2.49E-11
chr10-2919	chr10	30722176	30723979	+	29.4	1803	promoter-TSS (NM_001320961)	promoter-TSS (NM_001320961)	127	NM_005204	1326	Hs.432453	NM_005204	ENSG00000107968	MAP3K8	AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT	mitogen-activated protein kinase kinase kinase 8	protein-coding	29.44	4.85	6.070103093	2.13E-11
chr10-2920	chr10	30863850	30864850	+	14.1	1000	Intergenic	AluSx|SINE|Alu	54297	NM_183058	119180	Hs.522610	NM_183058	ENSG00000151033	LYZL2	LYZD2	lysozyme like 2	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr10-2923	chr10	30983625	30984625	+	15.4	1000	"intron (NR_036438, intron 1 of 9)"	"intron (NR_036438, intron 1 of 9)"	2922	NR_036438	645954	Hs.408581	NR_036438		SVILP1	-	supervillin pseudogene 1	pseudo	15.36	3.4	4.517647059	2.25E-05
chr10-2926	chr10	32371305	32372305	+	14.7	1000	Intergenic	Intergenic	-26434	NM_004521	3799	Hs.327736	NM_004521	ENSG00000170759	KIF5B	HEL-S-61|KINH|KNS|KNS1|UKHC	kinesin family member 5B	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr10-2927	chr10	33526274	33527274	+	15.4	1000	"intron (NM_001024628, intron 6 of 11)"	AluSz|SINE|Alu	97059	NM_001330068	8829	Hs.131704	NM_003873	ENSG00000099250	NRP1	BDCA4|CD304|NP1|NRP|VEGF165R	neuropilin 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr10-2929	chr10	33535563	33537187	+	23.7	1624	"intron (NM_001024628, intron 6 of 11)"	"intron (NM_001024628, intron 6 of 11)"	87458	NM_001330068	8829	Hs.131704	NM_003873	ENSG00000099250	NRP1	BDCA4|CD304|NP1|NRP|VEGF165R	neuropilin 1	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr10-2932	chr10	33809552	33811152	+	23.7	1600	Intergenic	Intergenic	-186519	NM_001244973	8829	Hs.131704	NM_003873	ENSG00000099250	NRP1	BDCA4|CD304|NP1|NRP|VEGF165R	neuropilin 1	protein-coding	23.68	1.94	12.20618557	6.71E-14
chr10-2936	chr10	33881995	33882995	+	14.7	1000	Intergenic	Intergenic	179113	NR_038932	100505583	Hs.568804	NR_038932	ENSG00000261683	LINC00838	-	long intergenic non-protein coding RNA 838	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr10-2939	chr10	37162403	37163403	+	14.7	1000	Intergenic	Intergenic	-251882	NM_052997	91074	Hs.373787	NM_052997	ENSG00000148513	ANKRD30A	NY-BR-1	ankyrin repeat domain 30A	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr10-2944	chr10	43561120	43562120	+	15.4	1000	Intergenic	Intergenic	-10897	NM_020630	5979	Hs.350321	NM_000323	ENSG00000165731	RET	CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1|RET51	ret proto-oncogene	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-2946	chr10	43602353	43603353	+	14.1	1000	"intron (NM_020630, intron 5 of 18)"	"intron (NM_020630, intron 5 of 18)"	30336	NM_020975	5979	Hs.350321	NM_000323	ENSG00000165731	RET	CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1|RET51	ret proto-oncogene	protein-coding	14.08	0	14.5040551	3.99E-13
chr10-2947	chr10	43612608	43613608	+	14.7	1000	"intron (NM_020630, intron 12 of 18)"	"intron (NM_020630, intron 12 of 18)"	-20785	NR_135077	55454	Hs.657569	NM_018590	ENSG00000169826	CSGALNACT2	CHGN2|ChGn-2|GALNACT-2|GALNACT2|PRO0082|beta4GalNAcT	chondroitin sulfate N-acetylgalactosaminyltransferase 2	protein-coding	14.72	0	15.16333034	3.99E-13
chr10-2948	chr10	43621013	43622013	+	14.7	1000	"intron (NM_020630, intron 18 of 18)"	"intron (NM_020630, intron 18 of 18)"	-12380	NR_135077	55454	Hs.657569	NM_018590	ENSG00000169826	CSGALNACT2	CHGN2|ChGn-2|GALNACT-2|GALNACT2|PRO0082|beta4GalNAcT	chondroitin sulfate N-acetylgalactosaminyltransferase 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-2957	chr10	44458874	44460362	+	22.4	1488	"intron (NR_136147, intron 4 of 4)"	"intron (NR_136147, intron 4 of 4)"	51768	NR_136148	283033	Hs.178244	NR_033846		LINC00841	-	long intergenic non-protein coding RNA 841	ncRNA	22.4	1.94	11.54639175	8.00E-13
chr10-2958	chr10	44780357	44781357	+	15.4	1000	Intergenic	MER21B|LTR|ERVL	-7341	NM_001258000	100130539	Hs.694626	NM_001258000	ENSG00000277288	C10orf142	-	chromosome 10 open reading frame 142	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr10-2959	chr10	44891787	44895000	+	49.3	3213	Intergenic	Intergenic	-12848	NM_001033886	6387	Hs.522891	NM_000609	ENSG00000107562	CXCL12	IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1	C-X-C motif chemokine ligand 12	protein-coding	49.29	5.82	8.469072165	2.31E-22
chr10-2964	chr10	45281364	45282364	+	15.4	1000	Intergenic	MER121|DNA|TcMar?	-124900	NM_001123376	643236	Hs.292788	NM_001123376	ENSG00000187783	TMEM72	C10orf127|KSP37	transmembrane protein 72	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-297	chr10	98157560	98158560	+	22.4	1000	"intron (NM_012465, intron 10 of 20)"	"intron (NM_012465, intron 10 of 20)"	-38938	NM_033207	93377	Hs.12449	NM_033207	ENSG00000197430	OPALIN	HTMP10|TMEM10|TMP10	oligodendrocytic myelin paranodal and inner loop protein	protein-coding	22.4	5.34	4.194756554	1.97E-06
chr10-2977	chr10	47019211	47021516	+	37.1	2305	Intergenic	Tigger9b|DNA|TcMar-Tigger	26817	NM_014696	9721	Hs.523375	NM_014696	ENSG00000204175	GPRIN2	GRIN2|KIAA0514	G protein regulated inducer of neurite outgrowth 2	protein-coding	37.12	6.8	5.458823529	7.17E-13
chr10-3001	chr10	48419620	48420620	+	16	1000	Intergenic	MLT1K|LTR|ERVL-MaLR	-3248	NM_016204	2658	Hs.279463	NM_016204	ENSG00000263761	GDF2	BMP-9|BMP9|HHT5	growth differentiation factor 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr10-3002	chr10	49448606	49451076	+	38.4	2470	"intron (NM_001318191, intron 3 of 26)"	"intron (NM_001318191, intron 3 of 26)"	9959	NM_001318191	143162	Hs.664786	NM_152428	ENSG00000170324	FRMPD2	PDZD5C|PDZK4|PDZK5C	FERM and PDZ domain containing 2	protein-coding	38.4	5.82	6.597938144	2.56E-15
chr10-3004	chr10	49686789	49688150	+	20.5	1361	"intron (NM_001347735, intron 3 of 8)"	"intron (NM_001347735, intron 3 of 8)"	14223	NM_001256026	58504	Hs.655672	NM_021226	ENSG00000128805	ARHGAP22	RhoGAP2|RhoGap22	Rho GTPase activating protein 22	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr10-3006	chr10	50058821	50059821	+	15.4	1000	"intron (NM_020945, intron 39 of 61)"	L1M5|LINE|L1	62959	NM_001006939	474354	Hs.202438	NM_001006939	ENSG00000165383	LRRC18	UNQ933|UNQ9338|VKGE9338	leucine rich repeat containing 18	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr10-3009	chr10	50480279	50481279	+	15.4	1000	Intergenic	Intergenic	26159	NR_108038	100506769	Hs.562293	NR_108038		C10orf71-AS1	-	C10orf71 antisense RNA 1	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr10-3016	chr10	52009283	52010283	+	15.4	1000	Intergenic	Intergenic	-1413	NM_001143974	56624	Hs.512645	NM_019893	ENSG00000188611	ASAH2	BCDase|HNAC1|LCDase|N-CDase|NCDase	N-acylsphingosine amidohydrolase 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr10-3017	chr10	52640027	52641027	+	14.7	1000	"intron (NM_001198818, intron 1 of 13)"	"intron (NM_001198818, intron 1 of 13)"	4908	NM_138932	29974	Hs.282795	NM_014576	ENSG00000148584	A1CF	ACF|ACF64|ACF65|APOBEC1CF|ASP	APOBEC1 complementation factor	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-3018	chr10	52743705	52744705	+	14.7	1000	Intergenic	Intergenic	-6706	NM_001098512	5592	Hs.407535	NM_006258	ENSG00000185532	PRKG1	AAT8|PKG|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha	"protein kinase, cGMP-dependent, type I"	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr10-302	chr10	102587084	102590523	+	73.6	3439	"3' UTR (NM_000278, exon 10 of 10)"	"3' UTR (NM_000278, exon 10 of 10)"	83335	NM_003989	5076	Hs.155644	NM_000278	ENSG00000075891	PAX2	FSGS7|PAPRS	paired box 2	protein-coding	73.61	6.31	11.66561014	5.99E-40
chr10-3020	chr10	62276139	62277139	+	14.7	1000	"intron (NM_001204403, intron 2 of 43)"	"intron (NM_001204403, intron 2 of 43)"	56075	NM_001204404	288	Hs.499725	NM_001149	ENSG00000151150	ANK3	ANKYRIN-G|MRT37	ankyrin 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-3021	chr10	62753985	62754985	+	14.7	1000	"intron (NR_024555, intron 1 of 11)"	L2a|LINE|L2	6251	NR_024554	9886	Hs.737374	NM_014836	ENSG00000072422	RHOBTB1	-	Rho related BTB domain containing 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-3025	chr10	64762763	64763763	+	14.7	1000	Intergenic	AluSx1|SINE|Alu	-129744	NM_001282405	29982	Hs.449628	NM_030759	ENSG00000148572	NRBF2	COPR|COPR1|COPR2|NRBF-2	nuclear receptor binding factor 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-3028	chr10	69999257	70000257	+	15.4	1000	Intergenic	Intergenic	-7887	NM_145178	220202	Hs.175396	NM_145178	ENSG00000179774	ATOH7	Math5|NCRNA|PHPVAR|RNANC|bHLHa13	atonal bHLH transcription factor 7	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr10-3030	chr10	71236451	71239712	+	53.1	3261	"intron (NM_012339, intron 1 of 7)"	"intron (NM_012339, intron 1 of 7)"	26855	NM_012339	23555	Hs.499941	NM_012339	ENSG00000099282	TSPAN15	2700063A19Rik|NET-7|NET7|TM4SF15	tetraspanin 15	protein-coding	53.13	7.77	6.837837838	1.02E-20
chr10-3039	chr10	71607038	71608038	+	14.7	1000	"intron (NM_080798, intron 3 of 34)"	"intron (NM_080798, intron 3 of 34)"	45894	NM_080805	1305	Hs.695934	NM_005203	ENSG00000197467	COL13A1	CMS19|COLXIIIA1	collagen type XIII alpha 1 chain	protein-coding	14.72	0	15.16333034	3.99E-13
chr10-3045	chr10	72422358	72423358	+	14.1	1000	Intergenic	L1MC5|LINE|L1	-9404	NM_139155	140766	Hs.352156	NM_080722	ENSG00000138316	ADAMTS14	-	ADAM metallopeptidase with thrombospondin type 1 motif 14	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr10-3048	chr10	72506665	72507665	+	14.1	1000	"intron (NM_080722, intron 15 of 21)"	"intron (NM_080722, intron 15 of 21)"	35164	NR_134534	219793	Hs.386698	NM_152710	ENSG00000166220	TBATA	C10orf27|SPATIAL	"thymus, brain and testes associated"	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr10-3054	chr10	72681247	72682819	+	21.8	1572	Intergenic	MER94|DNA|hAT-Blackjack	-16777	NR_134314	105378349	Hs.119164	NR_134313	ENSG00000259267	LOC105378349	-	uncharacterized LOC105378349	ncRNA	21.76	1.94	11.21649485	8.00E-13
chr10-3055	chr10	72703525	72704786	+	17.9	1261	TTS (NR_134314)	TTS (NR_134314)	5345	NR_134313	105378349	Hs.119164	NR_134313	ENSG00000259267	LOC105378349	-	uncharacterized LOC105378349	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr10-3057	chr10	72711020	72712020	+	14.7	1000	"intron (NR_134313, intron 1 of 2)"	"intron (NR_134313, intron 1 of 2)"	12710	NR_134313	105378349	Hs.119164	NR_134313	ENSG00000259267	LOC105378349	-	uncharacterized LOC105378349	ncRNA	14.72	0.49	30.04081633	3.99E-13
chr10-3068	chr10	72963914	72964914	+	14.7	1000	Intergenic	Intergenic	-7878	NM_001244889	219699	Hs.522997	NM_170744	ENSG00000107731	UNC5B	UNC5H2|p53RDL1	unc-5 netrin receptor B	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-3070	chr10	73017959	73018959	+	14.7	1000	"intron (NM_170744, intron 1 of 16)"	"intron (NM_170744, intron 1 of 16)"	-40474	NR_038453	728978	Hs.646725	NR_038453	ENSG00000237512	UNC5B-AS1	-	UNC5B antisense RNA 1	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr10-3071	chr10	73028429	73029429	+	14.1	1000	"intron (NM_170744, intron 1 of 16)"	L1ME4a|LINE|L1	-50081	NR_033414	55315	Hs.438419	NM_018344	ENSG00000198246	SLC29A3	ENT3|HCLAP|HJCD|PHID	solute carrier family 29 member 3	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr10-3073	chr10	73060233	73061233	+	14.7	1000	"3' UTR (NM_001244889, exon 16 of 16)"	"3' UTR (NM_001244889, exon 16 of 16)"	-18277	NR_033414	55315	Hs.438419	NM_018344	ENSG00000198246	SLC29A3	ENT3|HCLAP|HJCD|PHID	solute carrier family 29 member 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-3075	chr10	73144344	73145810	+	21.8	1466	Intergenic	Intergenic	-11614	NM_001171931	64072	Hs.656032	NM_022124	ENSG00000107736	CDH23	CDHR23|USH1D	cadherin related 23	protein-coding	21.76	1.46	14.90410959	8.59E-15
chr10-3079	chr10	73205576	73206576	+	15.4	1000	"exon (NM_001171932, exon 3 of 11)"	"exon (NM_001171932, exon 3 of 11)"	49385	NM_022124	64072	Hs.656032	NM_022124	ENSG00000107736	CDH23	CDHR23|USH1D	cadherin related 23	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr10-3080	chr10	73238638	73239638	+	14.1	1000	"intron (NM_052836, intron 3 of 12)"	"intron (NM_052836, intron 3 of 12)"	32539	NR_120672	102723377	Hs.568789	NR_120672	ENSG00000223817	CDH23-AS1	C10orf106|NCRNA00223|bA327E2.3	CDH23 antisense RNA 1	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr10-3089	chr10	73416545	73418602	+	30.7	2057	"intron (NM_001171931, intron 13 of 24)"	"intron (NM_001171931, intron 13 of 24)"	62005	NM_001164375	414152	Hs.568788	NM_001164375	ENSG00000214688	C10orf105	-	chromosome 10 open reading frame 105	protein-coding	30.72	5.34	5.752808989	2.29E-11
chr10-3094	chr10	75659143	75662578	+	43.5	3435	Intergenic	AluSx1|SINE|Alu	-9999	NM_002658	5328	Hs.77274	NM_002658	ENSG00000122861	PLAU	ATF|BDPLT5|QPD|UPA|URK|u-PA	"plasminogen activator, urokinase"	protein-coding	43.53	10.68	4.075842697	2.22E-11
chr10-3095	chr10	75702334	75703334	+	14.1	1000	Intergenic	AluJb|SINE|Alu	-20299	NM_001001791	414236	Hs.585453	NM_001001791	ENSG00000222047	C10orf55	bA417O11.3	chromosome 10 open reading frame 55	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr10-3098	chr10	77178967	77179967	+	14.7	1000	Intergenic	L1MC4|LINE|L1	10552	NR_110304	101929234	Hs.694695	NR_110304		LOC101929234	-	uncharacterized LOC101929234	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr10-310	chr10	116162051	116164957	+	70.4	2906	"intron (NM_001001936, intron 1 of 18)"	CpG	1033	NM_001001936	84632	Hs.501106	NM_032550	ENSG00000169129	AFAP1L2	CTB-1144G6.4|KIAA1914|XB130	actin filament associated protein 1 like 2	protein-coding	70.41	6.8	10.35441176	3.21E-36
chr10-3101	chr10	77237284	77238284	+	15.4	1000	"intron (NM_001305581, intron 2 of 6)"	"intron (NM_001305581, intron 2 of 6)"	46380	NM_001305581	83938	Hs.118161	NM_032024	ENSG00000148655	C10orf11	CDA017	chromosome 10 open reading frame 11	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr10-3103	chr10	77300752	77301752	+	15.4	1000	"intron (NM_001305581, intron 2 of 6)"	"intron (NM_001305581, intron 2 of 6)"	-10964	NR_030337	693191		NR_030337	ENSG00000207583	MIR606	MIRN606|hsa-mir-606	microRNA 606	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr10-3104	chr10	77400421	77401421	+	14.7	1000	"intron (NM_001305581, intron 2 of 6)"	MIR3|SINE|MIR	-6346	NR_131178	83938	Hs.118161	NM_032024	ENSG00000148655	C10orf11	CDA017	chromosome 10 open reading frame 11	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-3107	chr10	77700655	77701655	+	14.7	1000	"intron (NR_131178, intron 3 of 7)"	"intron (NR_131178, intron 3 of 7)"	158636	NM_032024	83938	Hs.118161	NM_032024	ENSG00000148655	C10orf11	CDA017	chromosome 10 open reading frame 11	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-3108	chr10	77719901	77721329	+	19.8	1428	"intron (NR_131178, intron 3 of 7)"	AluSc8|SINE|Alu	178096	NM_032024	83938	Hs.118161	NM_032024	ENSG00000148655	C10orf11	CDA017	chromosome 10 open reading frame 11	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr10-311	chr10	118886874	118893068	+	80.7	6194	"3' UTR (NM_199131, exon 4 of 4)"	"3' UTR (NM_199131, exon 4 of 4)"	-3874	NM_001258300	57698	Hs.501140	NM_018330	ENSG00000187164	SHTN1	KIAA1598|shootin-1	shootin 1	protein-coding	80.65	15.53	5.193174501	6.52E-25
chr10-3110	chr10	78725868	78727421	+	25.6	1553	"intron (NM_001322832, intron 19 of 27)"	"intron (NM_001322832, intron 19 of 27)"	78842	NR_120655	101929328	Hs.664552	NR_120655	ENSG00000236467	KCNMA1-AS1	-	KCNMA1 antisense RNA 1	ncRNA	25.6	3.88	6.597938144	1.00E-10
chr10-3115	chr10	79068431	79069431	+	14.1	1000	"intron (NM_001322838, intron 1 of 29)"	"intron (NM_001322838, intron 1 of 29)"	41588	NM_001322838	3778	Hs.144795	NM_002247	ENSG00000156113	KCNMA1	BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1	potassium calcium-activated channel subfamily M alpha 1	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr10-3117	chr10	79277789	79278789	+	14.7	1000	"intron (NM_001322832, intron 1 of 27)"	"intron (NM_001322832, intron 1 of 27)"	119288	NM_001322837	3778	Hs.144795	NM_002247	ENSG00000156113	KCNMA1	BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1	potassium calcium-activated channel subfamily M alpha 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-3118	chr10	79338219	79339219	+	14.7	1000	"intron (NM_001322832, intron 1 of 27)"	"intron (NM_001322832, intron 1 of 27)"	58858	NM_001322837	3778	Hs.144795	NM_002247	ENSG00000156113	KCNMA1	BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1	potassium calcium-activated channel subfamily M alpha 1	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr10-3121	chr10	79449048	79450048	+	15.4	1000	Intergenic	Intergenic	-51971	NM_001271522	3778	Hs.144795	NM_002247	ENSG00000156113	KCNMA1	BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1	potassium calcium-activated channel subfamily M alpha 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-3126	chr10	80065012	80066012	+	14.1	1000	Intergenic	Intergenic	38427	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr10-3134	chr10	80264295	80265295	+	14.7	1000	Intergenic	Intergenic	237710	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr10-314	chr10	120175521	120176521	+	21.8	1000	Intergenic	Intergenic	59401	NR_108045	100506126	Hs.69494	NR_108045	ENSG00000232139	LINC00867	-	long intergenic non-protein coding RNA 867	ncRNA	21.76	5.34	4.074906367	1.97E-06
chr10-3141	chr10	80519944	80523910	+	62.1	3966	Intergenic	Intergenic	305278	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA	62.09	3.88	16.00257732	5.60E-40
chr10-3149	chr10	80666711	80670223	+	48.6	3512	Intergenic	Intergenic	158738	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA	48.65	10.68	4.555243446	5.88E-14
chr10-3152	chr10	80688319	80689319	+	14.1	1000	Intergenic	Intergenic	138386	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr10-3155	chr10	80726206	80727206	+	14.1	1000	"intron (NR_015429, intron 3 of 7)"	"intron (NR_015429, intron 3 of 7)"	100499	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr10-3158	chr10	80801284	80802284	+	15.4	1000	"intron (NR_015429, intron 3 of 7)"	L1MCa|LINE|L1	25421	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr10-3159	chr10	81095008	81096008	+	14.7	1000	Intergenic	Intergenic	-11712	NM_005729	10105	Hs.381072	NM_005729	ENSG00000108179	PPIF	CYP3|CyP-M|Cyp-D|CypD	peptidylprolyl isomerase F	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-3163	chr10	81211502	81212502	+	14.1	1000	Intergenic	L2c|LINE|L2	-6619	NM_153367	219654	Hs.523080	NM_153367	ENSG00000165424	ZCCHC24	C10orf56|Z3CXXC8	zinc finger CCHC-type containing 24	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr10-3164	chr10	81251607	81252607	+	15.4	1000	Intergenic	Intergenic	18631	NR_136624	729815	Hs.564060	NR_136624		LOC729815	-	uncharacterized LOC729815	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr10-3167	chr10	81664069	81666393	+	35.2	2324	"intron (NR_033857, intron 1 of 5)"	MIR3|SINE|MIR	577	NR_033857	100288974	Hs.733579	NR_033857	ENSG00000242600	BMS1P21	-	"BMS1, ribosome biogenesis factor pseudogene 21"	pseudo	35.2	3.88	9.072164948	5.09E-17
chr10-3173	chr10	82304184	82305184	+	15.4	1000	"intron (NM_001145719, intron 1 of 6)"	L2a|LINE|L2	4109	NM_001145719	387694	Hs.147643	NM_207372	ENSG00000178217	SH2D4B	-	SH2 domain containing 4B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-3177	chr10	84512572	84513572	+	14.1	1000	"intron (NM_001165972, intron 3 of 8)"	L1M5|LINE|L1	-520396	NR_120666	101929590	Hs.733268	NR_120666	ENSG00000225738	NRG3-AS1	C10orf100|Em:AC010157.1	NRG3 antisense RNA 1	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr10-3178	chr10	85635056	85636056	+	15.4	1000	Intergenic	Intergenic	-198711	NR_134317	105378397	Hs.147725	NR_134317		LOC105378397	-	uncharacterized LOC105378397	ncRNA	15.36	0.49	31.34693878	1.26E-14
chr10-318	chr10	130203732	130204732	+	22.4	1000	Intergenic	Intergenic	120018	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	22.4	0.49	45.71428571	1.33E-22
chr10-3183	chr10	86637692	86638692	+	14.7	1000	Intergenic	Intergenic	320469	NR_120668	101929624	Hs.588831	NR_120667	ENSG00000237267	LINC01519	-	long intergenic non-protein coding RNA 1519	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr10-3184	chr10	87587174	87588174	+	15.4	1000	"intron (NM_017551, intron 8 of 15)"	L1PA15|LINE|L1	250186	NR_038986	100507470	Hs.585483	NR_038986	ENSG00000234942	GRID1-AS1	-	GRID1 antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr10-3188	chr10	88092047	88093047	+	14.7	1000	"intron (NM_017551, intron 2 of 15)"	"intron (NM_017551, intron 2 of 15)"	33703	NM_017551	2894	Hs.530653	NM_017551	ENSG00000182771	GRID1	GluD1	glutamate ionotropic receptor delta type subunit 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr10-3189	chr10	88134243	88136887	+	38.4	2644	Intergenic	L2a|LINE|L2	-9315	NM_017551	2894	Hs.530653	NM_017551	ENSG00000182771	GRID1	GluD1	glutamate ionotropic receptor delta type subunit 1	protein-coding	38.4	5.82	6.597938144	2.56E-15
chr10-3190	chr10	88160033	88162794	+	45.4	2761	Intergenic	Intergenic	-35163	NM_017551	2894	Hs.530653	NM_017551	ENSG00000182771	GRID1	GluD1	glutamate ionotropic receptor delta type subunit 1	protein-coding	45.45	8.74	5.200228833	2.02E-14
chr10-3192	chr10	88444787	88445787	+	14.1	1000	"intron (NM_001080115, intron 4 of 6)"	"intron (NM_001080115, intron 4 of 6)"	16861	NM_007078	11155	Hs.657271	NM_007078	ENSG00000122367	LDB3	CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP	LIM domain binding 3	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr10-3197	chr10	92246300	92247300	+	14.1	1000	"intron (NR_110657, intron 2 of 6)"	L2a|LINE|L2	53762	NR_110657	101926942	Hs.382666	NR_110657	ENSG00000236373	LOC101926942	-	uncharacterized LOC101926942	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr10-3198	chr10	92516778	92517778	+	13.4	1000	"intron (NM_000872, intron 1 of 2)"	HAL1b|LINE|L1	100393	NM_000872	3363	Hs.73739	NM_000872	ENSG00000148680	HTR7	5-HT7	5-hydroxytryptamine receptor 7	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr10-3205	chr10	93645903	93647528	+	26.9	1625	Intergenic	Intergenic	22543	NM_152429	143282	Hs.466120	NM_152429	ENSG00000174721	FGFBP3	C10orf13|FGF-BP3	fibroblast growth factor binding protein 3	protein-coding	26.88	3.4	7.905882353	1.25E-12
chr10-3207	chr10	94834953	94835953	+	14.7	1000	"intron (NM_057157, intron 4 of 6)"	"intron (NM_057157, intron 4 of 6)"	1806	NM_000783	1592	Hs.150595	NM_000783	ENSG00000095596	CYP26A1	CP26|CYP26|P450RAI|P450RAI1	cytochrome P450 family 26 subfamily A member 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-321	chr10	134783907	134786081	+	44.2	2174	"non-coding (NR_046231, exon 2 of 3)"	"non-coding (NR_046231, exon 2 of 3)"	5956	NR_046231	399829	Hs.252872	NR_046231	ENSG00000240707	LINC01168	-	long intergenic non-protein coding RNA 1168	ncRNA	44.17	5.82	7.589347079	9.68E-19
chr10-3210	chr10	94973447	94976240	+	34.6	2793	Intergenic	Intergenic	141196	NM_000783	1592	Hs.150595	NM_000783	ENSG00000095596	CYP26A1	CP26|CYP26|P450RAI|P450RAI1	cytochrome P450 family 26 subfamily A member 1	protein-coding	34.56	7.77	4.447876448	3.74E-10
chr10-3216	chr10	95389437	95390437	+	14.7	1000	"intron (NM_006204, intron 8 of 21)"	"intron (NM_006204, intron 8 of 21)"	17592	NM_006204	5146	Hs.658121	NM_006204	ENSG00000095464	PDE6C	ACHM5|COD4|PDEA2	phosphodiesterase 6C	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr10-3220	chr10	95568852	95570264	+	23.7	1412	Intergenic	MLT1I|LTR|ERVL-MaLR	51992	NM_005097	9211	Hs.533670	NM_005097	ENSG00000108231	LGI1	ADLTE|ADPAEF|ADPEAF|EPITEMPIN|EPT|ETL1|IB1099	leucine rich glioma inactivated 1	protein-coding	23.68	4.37	5.418764302	2.46E-08
chr10-3222	chr10	95892964	95893964	+	12.8	1000	"intron (NM_016341, intron 3 of 32)"	"intron (NM_016341, intron 3 of 32)"	-24913	NR_120616	101927049	Hs.144492	NR_120615	ENSG00000232913	PLCE1-AS2	-	PLCE1 antisense RNA 2	ncRNA	12.8	1.46	8.767123288	3.57E-07
chr10-3224	chr10	96944999	96945999	+	14.1	1000	Intergenic	L1M2|LINE|L1	-8458	NM_207321	142827	Hs.134229	NM_207321	ENSG00000173124	ACSM6	C10orf129|bA310E22.3	acyl-CoA synthetase medium-chain family member 6	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr10-3226	chr10	97179693	97180693	+	15.4	1000	"intron (NM_001034954, intron 6 of 30)"	"intron (NM_001034954, intron 6 of 30)"	20744	NM_001034955	10580	Hs.38621	NM_006434	ENSG00000095637	SORBS1	CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1	sorbin and SH3 domain containing 1	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr10-3227	chr10	97303484	97304484	+	14.1	1000	"intron (NM_015385, intron 1 of 24)"	"intron (NM_015385, intron 1 of 24)"	17193	NM_015385	10580	Hs.38621	NM_006434	ENSG00000095637	SORBS1	CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1	sorbin and SH3 domain containing 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr10-3228	chr10	97312445	97313445	+	14.7	1000	"intron (NM_015385, intron 1 of 24)"	AluJr4|SINE|Alu	8232	NM_015385	10580	Hs.38621	NM_006434	ENSG00000095637	SORBS1	CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1	sorbin and SH3 domain containing 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr10-3231	chr10	98187145	98188485	+	21.8	1340	"intron (NM_012465, intron 5 of 20)"	AluSp|SINE|Alu	-68693	NM_033207	93377	Hs.12449	NM_033207	ENSG00000197430	OPALIN	HTMP10|TMEM10|TMP10	oligodendrocytic myelin paranodal and inner loop protein	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr10-3235	chr10	98359654	98360654	+	14.7	1000	"intron (NM_152309, intron 16 of 16)"	"intron (NM_152309, intron 16 of 16)"	-13345	NM_020123	56889	Hs.500674	NM_020123	ENSG00000077147	TM9SF3	EP70-P-iso|SMBP	transmembrane 9 superfamily member 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-3237	chr10	99276406	99277789	+	21.8	1383	"intron (NM_024954, intron 1 of 2)"	"intron (NM_024954, intron 1 of 2)"	18458	NM_024954	80019	Hs.500724	NM_024954	ENSG00000165886	UBTD1	-	ubiquitin domain containing 1	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr10-3243	chr10	99547219	99548219	+	15.4	1000	Intergenic	MER94|DNA|hAT-Blackjack	-15963	NM_003015	6425	Hs.279565	NM_003015	ENSG00000120057	SFRP5	SARP3	secreted frizzled related protein 5	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-3244	chr10	99572647	99575708	+	40.3	3061	Intergenic	Intergenic	35378	NR_108035	100505561	Hs.351904	NR_108035	ENSG00000227356	LINC00866	-	long intergenic non-protein coding RNA 866	ncRNA	40.33	5.82	6.929553265	3.74E-16
chr10-3246	chr10	99665458	99666458	+	14.7	1000	"intron (NM_018058, intron 6 of 14)"	"intron (NM_018058, intron 6 of 14)"	55963	NM_001010917	401647	Hs.567524	NM_001010917	ENSG00000155265	GOLGA7B	C10orf132|C10orf133|bA451M19.3|bA459F3.4	golgin A7 family member B	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr10-3247	chr10	99680355	99681355	+	15.4	1000	"intron (NM_018058, intron 4 of 14)"	MER5A|DNA|hAT-Charlie	70860	NM_001010917	401647	Hs.567524	NM_001010917	ENSG00000155265	GOLGA7B	C10orf132|C10orf133|bA451M19.3|bA459F3.4	golgin A7 family member B	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr10-3250	chr10	99737707	99738707	+	14.7	1000	"intron (NM_018058, intron 2 of 14)"	MIR|SINE|MIR	52378	NM_001206528	55118	Hs.500736	NM_018058	ENSG00000095713	CRTAC1	ASPIC|ASPIC1|CEP-68	cartilage acidic protein 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr10-3254	chr10	100061099	100062099	+	15.4	1000	Intergenic	Intergenic	-33592	NM_032211	84171	Hs.306814	NM_032211	ENSG00000138131	LOXL4	LOXC	lysyl oxidase like 4	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr10-3255	chr10	100068641	100075566	+	89	6925	Intergenic	MER94|DNA|hAT-Blackjack	-44096	NM_032211	84171	Hs.306814	NM_032211	ENSG00000138131	LOXL4	LOXC	lysyl oxidase like 4	protein-coding	88.97	20.87	4.26305702	2.81E-22
chr10-3259	chr10	100108308	100109308	+	14.7	1000	Intergenic	Intergenic	46256	NR_031619	100302133		NR_031619	ENSG00000119943	MIR1287	MIRN1287|hsa-mir-1287|mir-1287	microRNA 1287	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr10-3262	chr10	100215013	100216013	+	15.4	1000	Intergenic	Intergenic	-8793	NM_001322481	3257	Hs.404568	NM_000195	ENSG00000107521	HPS1	BLOC3S1|HPS	"HPS1, biogenesis of lysosomal organelles complex 3 subunit 1"	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr10-3263	chr10	100402241	100403241	+	15.4	1000	"intron (NM_021828, intron 6 of 11)"	"intron (NM_021828, intron 6 of 11)"	-196021	NM_001322481	3257	Hs.404568	NM_000195	ENSG00000107521	HPS1	BLOC3S1|HPS	"HPS1, biogenesis of lysosomal organelles complex 3 subunit 1"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-3275	chr10	102438503	102440006	+	26.9	1503	Intergenic	Intergenic	-56212	NM_001304569	5076	Hs.155644	NM_000278	ENSG00000075891	PAX2	FSGS7|PAPRS	paired box 2	protein-coding	26.88	5.34	5.033707865	3.94E-09
chr10-3276	chr10	102468901	102469901	+	15.4	1000	Intergenic	Intergenic	-26065	NM_001304569	5076	Hs.155644	NM_000278	ENSG00000075891	PAX2	FSGS7|PAPRS	paired box 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-3277	chr10	102471742	102472742	+	14.1	1000	Intergenic	MIR3|SINE|MIR	-23224	NM_001304569	5076	Hs.155644	NM_000278	ENSG00000075891	PAX2	FSGS7|PAPRS	paired box 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr10-3278	chr10	102487536	102489858	+	33.9	2322	Intergenic	Intergenic	-6769	NM_001304569	5076	Hs.155644	NM_000278	ENSG00000075891	PAX2	FSGS7|PAPRS	paired box 2	protein-coding	33.92	3.4	9.976470588	2.03E-17
chr10-3282	chr10	102511722	102513875	+	35.2	2153	"intron (NM_003989, intron 3 of 9)"	"intron (NM_003989, intron 3 of 9)"	7330	NM_003989	5076	Hs.155644	NM_000278	ENSG00000075891	PAX2	FSGS7|PAPRS	paired box 2	protein-coding	35.2	5.82	6.048109966	6.75E-13
chr10-3287	chr10	102532990	102536179	+	37.8	3189	"intron (NM_003989, intron 3 of 9)"	MIR|SINE|MIR	29116	NM_003989	5076	Hs.155644	NM_000278	ENSG00000075891	PAX2	FSGS7|PAPRS	paired box 2	protein-coding	37.76	7.28	5.186813187	3.68E-12
chr10-3295	chr10	102651616	102652616	+	15.4	1000	Intergenic	L1ME3|LINE|L1	-20210	NM_001136123	55719	Hs.447458	NM_018121	ENSG00000119906	SLF2	C10orf6|FAM178A	SMC5-SMC6 complex localization factor 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-3298	chr10	102843802	102844802	+	15.4	1000	Intergenic	AluJr|SINE|Alu	18246	NR_135068	81621	Hs.534859	NM_030929	ENSG00000107821	KAZALD1	BONO1|FKSG28|FKSG40|IGFBP-rP10	Kazal type serine peptidase inhibitor domain 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-3301	chr10	102905145	102907347	+	42.9	2202	Intergenic	CpG	-5223	NR_130724	100038246	Hs.368784	NM_001085398	ENSG00000236311	TLX1NB	APT-B7|TD1|TDI	TLX1 neighbor	ncRNA	42.89	7.28	5.891483516	3.82E-15
chr10-3305	chr10	103005871	103006871	+	14.7	1000	Intergenic	AluJb|SINE|Alu	16936	NR_120621	101927419	Hs.638503	NR_120621	ENSG00000229649	LOC101927419	-	uncharacterized LOC101927419	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr10-3307	chr10	103048943	103055706	+	87.7	6763	Intergenic	Intergenic	-29017	NR_120621	101927419	Hs.638503	NR_120621	ENSG00000229649	LOC101927419	-	uncharacterized LOC101927419	ncRNA	87.69	15.53	5.646490663	1.35E-28
chr10-3309	chr10	103058517	103059517	+	14.7	1000	Intergenic	Intergenic	-35710	NR_120621	101927419	Hs.638503	NR_120621	ENSG00000229649	LOC101927419	-	uncharacterized LOC101927419	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr10-3314	chr10	103518951	103519951	+	12.8	1000	Intergenic	Intergenic	16308	NM_033163	2253	Hs.57710	NM_006119	ENSG00000107831	FGF8	AIGF|FGF-8|HBGF-8|HH6|KAL6	fibroblast growth factor 8	protein-coding	12.8	1.94	6.597938144	4.51E-06
chr10-332	chr10	14140519	14141519	+	21.1	1000	"intron (NR_134578, intron 2 of 3)"	"intron (NR_134578, intron 2 of 3)"	24736	NR_120638	101928453	Hs.650212	NR_120638		LOC101928453	-	uncharacterized LOC101928453	ncRNA	21.12	3.4	6.211764706	2.41E-08
chr10-3323	chr10	105356695	105357695	+	13.4	1000	"3' UTR (NM_014631, exon 14 of 14)"	"3' UTR (NM_014631, exon 14 of 14)"	-79996	NR_120675	102724341	Hs.599425	NR_120675	ENSG00000235470	NEURL1-AS1	-	NEURL1 antisense RNA 1	ncRNA	13.44	1.46	9.205479452	3.57E-07
chr10-3324	chr10	105400166	105401166	+	14.7	1000	"intron (NM_014631, intron 8 of 13)"	"intron (NM_014631, intron 8 of 13)"	-105871	NR_038940	100505839	Hs.655149	NR_038940	ENSG00000280693	SH3PXD2A-AS1	-	SH3PXD2A antisense RNA 1	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr10-3327	chr10	105684731	105685731	+	14.1	1000	Intergenic	AluSp|SINE|Alu	-7186	NM_024928	79991	Hs.62314	NM_024928	ENSG00000107960	STN1	AAF-44|AAF44|OBFC1|RPA-32|bA541N10.2	"STN1, CST complex subunit"	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr10-3333	chr10	106054466	106055763	+	19.8	1297	"intron (NM_001191014, intron 3 of 4)"	"intron (NM_001191014, intron 3 of 4)"	20227	NM_001191015	119391	Hs.107384	NM_183239	ENSG00000065621	GSTO2	GSTO 2-2|bA127L20.1	glutathione S-transferase omega 2	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr10-3336	chr10	107407127	107408127	+	15.4	1000	Intergenic	MER39B|LTR|ERV1	172464	NR_120625	101927549	Hs.556885	NR_120625		LOC101927549	-	uncharacterized LOC101927549	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr10-3338	chr10	109957767	109958767	+	15.4	1000	Intergenic	Intergenic	-129216	NR_125760	103695365	Hs.648991	NR_125760	ENSG00000229981	LINC01435	TCONS_00018040	long intergenic non-protein coding RNA 1435	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr10-3341	chr10	111920920	111921920	+	14.7	1000	Intergenic	L1M4|LINE|L1	-45943	NM_130439	4601	Hs.602078	NM_005962	ENSG00000119950	MXI1	MAD2|MXD2|MXI|bHLHc11	"MAX interactor 1, dimerization protein"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr10-3344	chr10	111957122	111959006	+	27.5	1884	Intergenic	Tigger1|DNA|TcMar-Tigger	-9299	NM_130439	4601	Hs.602078	NM_005962	ENSG00000119950	MXI1	MAD2|MXD2|MXI|bHLHc11	"MAX interactor 1, dimerization protein"	protein-coding	27.52	3.4	8.094117647	1.25E-12
chr10-3346	chr10	112252235	112254966	+	40.3	2731	Intergenic	Intergenic	-4025	NM_004419	1847	Hs.2128	NM_004419	ENSG00000138166	DUSP5	DUSP|HVH3	dual specificity phosphatase 5	protein-coding	40.33	6.8	5.930882353	2.14E-14
chr10-3353	chr10	112557868	112558868	+	14.7	1000	"intron (NM_001134363, intron 6 of 13)"	"intron (NM_001134363, intron 6 of 13)"	72294	NR_026932	282997	Hs.599931	NR_026932		PDCD4-AS1	-	PDCD4 antisense RNA 1	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr10-3354	chr10	113522212	113524390	+	33.9	2178	Intergenic	L2a|LINE|L2	420236	NM_001244949	57678	Hs.42586	NM_020918	ENSG00000119927	GPAM	GPAT|GPAT1	"glycerol-3-phosphate acyltransferase, mitochondrial"	protein-coding	33.92	5.82	5.828178694	4.04E-12
chr10-3356	chr10	113847115	113848115	+	14.1	1000	Intergenic	Intergenic	95922	NM_001244949	57678	Hs.42586	NM_020918	ENSG00000119927	GPAM	GPAT|GPAT1	"glycerol-3-phosphate acyltransferase, mitochondrial"	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr10-3359	chr10	114057785	114058785	+	15.4	1000	"intron (NM_058222, intron 7 of 9)"	MIRc|SINE|MIR	-1085	NR_106771	102466189		NR_106771	ENSG00000276857	MIR6715A	hsa-mir-6715a	microRNA 6715a	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr10-3362	chr10	114081008	114082301	+	17.9	1293	"intron (NR_028134, intron 12 of 18)"	MER5A|DNA|hAT-Charlie	-22208	NR_106772	102465427		NR_106772	ENSG00000283688	MIR6715B	hsa-mir-6715b	microRNA 6715b	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr10-3367	chr10	115084325	115085325	+	15.4	1000	Intergenic	Intergenic	-225765	NM_001177660	3026	Hs.422542	NM_004132	ENSG00000148702	HABP2	FSAP|HABP|HGFAL|NMTC5|PHBP	hyaluronan binding protein 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-3368	chr10	115153526	115154526	+	14.1	1000	Intergenic	Intergenic	-156564	NM_001177660	3026	Hs.422542	NM_004132	ENSG00000148702	HABP2	FSAP|HABP|HGFAL|NMTC5|PHBP	hyaluronan binding protein 2	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr10-3373	chr10	115356202	115357544	+	19.2	1342	"exon (NM_001261463, exon 37 of 42)"	"exon (NM_001261463, exon 37 of 42)"	44136	NM_004132	3026	Hs.422542	NM_004132	ENSG00000148702	HABP2	FSAP|HABP|HGFAL|NMTC5|PHBP	hyaluronan binding protein 2	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr10-3374	chr10	115378440	115379697	+	19.8	1257	"intron (NM_198060, intron 25 of 41)"	"intron (NM_198060, intron 25 of 41)"	44761	NM_001322945	4892	Hs.268788	NM_006175	ENSG00000197893	NRAP	N-RAP	nebulin related anchoring protein	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr10-3377	chr10	115429910	115430910	+	14.7	1000	Intergenic	MER51A|LTR|ERV1	-6581	NM_006175	4892	Hs.268788	NM_006175	ENSG00000197893	NRAP	N-RAP	nebulin related anchoring protein	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr10-3383	chr10	115549994	115551562	+	23	1568	Intergenic	Intergenic	-12965	NR_039703	100616162		NR_039703	ENSG00000283656	MIR4483	-	microRNA 4483	ncRNA	23.04	1.46	15.78082192	5.41E-16
chr10-3385	chr10	115730993	115733767	+	46.1	2774	Intergenic	MARNA|DNA|TcMar-Mariner	-71426	NM_000684	153	Hs.99913	NM_000684	ENSG00000043591	ADRB1	ADRB1R|B1AR|BETA1AR|RHR	adrenoceptor beta 1	protein-coding	46.09	8.74	5.273455378	3.81E-15
chr10-3394	chr10	116042399	116043399	+	14.1	1000	"intron (NM_001272046, intron 9 of 13)"	"intron (NM_001272046, intron 9 of 13)"	43526	NM_001320804	340706	Hs.197741	NM_198496	ENSG00000165816	VWA2	AMACO|CCSP-2|NET42	von Willebrand factor A domain containing 2	protein-coding	14.08	0	14.5040551	3.99E-13
chr10-3396	chr10	116770873	116771873	+	15.4	1000	Intergenic	MSTB1|LTR|ERVL-MaLR	16957	NR_120677	102724589		NR_120677	ENSG00000236799	LOC102724589	-	uncharacterized LOC102724589	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr10-3403	chr10	118347351	118348351	+	14.7	1000	Intergenic	Charlie13a|DNA|hAT-Charlie	-2620	NM_006229	5407	Hs.73923	NM_006229	ENSG00000187021	PNLIPRP1	PLRP1	pancreatic lipase related protein 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-3415	chr10	119296677	119298391	+	25	1714	"intron (NR_002791, intron 2 of 3)"	CpG	-4422	NM_001165924	2018	Hs.202095	NM_004098	ENSG00000170370	EMX2	-	empty spiracles homeobox 2	protein-coding	24.96	1.94	12.86597938	5.33E-15
chr10-3417	chr10	119328605	119329605	+	14.7	1000	Intergenic	Intergenic	-24526	NR_002791	196047	Hs.312592	NR_002791	ENSG00000229847	EMX2OS	EMX2-AS1|NCRNA00045	EMX2 opposite strand/antisense RNA	ncRNA	14.72	0	15.16333034	3.99E-13
chr10-3418	chr10	119430989	119431989	+	15.4	1000	Intergenic	Intergenic	-126910	NR_002791	196047	Hs.312592	NR_002791	ENSG00000229847	EMX2OS	EMX2-AS1|NCRNA00045	EMX2 opposite strand/antisense RNA	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr10-3419	chr10	119532630	119533630	+	14.7	1000	Intergenic	Intergenic	-228551	NR_002791	196047	Hs.312592	NR_002791	ENSG00000229847	EMX2OS	EMX2-AS1|NCRNA00045	EMX2 opposite strand/antisense RNA	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr10-3422	chr10	119612019	119613019	+	14.7	1000	Intergenic	Intergenic	193595	NM_014904	22841	Hs.173656	NM_014904	ENSG00000107560	RAB11FIP2	Rab11-FIP2|nRip11	RAB11 family interacting protein 2	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr10-3423	chr10	119623226	119624226	+	14.1	1000	Intergenic	Intergenic	182388	NM_014904	22841	Hs.173656	NM_014904	ENSG00000107560	RAB11FIP2	Rab11-FIP2|nRip11	RAB11 family interacting protein 2	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr10-3424	chr10	119647533	119648533	+	15.4	1000	Intergenic	AluJo|SINE|Alu	158081	NM_014904	22841	Hs.173656	NM_014904	ENSG00000107560	RAB11FIP2	Rab11-FIP2|nRip11	RAB11 family interacting protein 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-3427	chr10	120045168	120047277	+	30.7	2109	Intergenic	Intergenic	55617	NM_001134672	63877	Hs.105575	NM_022063	ENSG00000165669	FAM204A	C10orf84|bA319I23.1	family with sequence similarity 204 member A	protein-coding	30.72	1.46	21.04109589	1.19E-23
chr10-3430	chr10	120333133	120334133	+	15.4	1000	Intergenic	(TTA)n|Simple_repeat|Simple_repeat	21527	NM_004248	2834	Hs.248119	NM_004248	ENSG00000119973	PRLHR	GPR10|GR3|PrRPR	prolactin releasing hormone receptor	protein-coding	15.36	0	15.82260557	1.26E-14
chr10-3431	chr10	120359628	120360628	+	15.4	1000	Intergenic	Intergenic	-4968	NM_004248	2834	Hs.248119	NM_004248	ENSG00000119973	PRLHR	GPR10|GR3|PrRPR	prolactin releasing hormone receptor	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-3443	chr10	121037912	121038912	+	14.1	1000	"intron (NM_005308, intron 1 of 15)"	AluSc8|SINE|Alu	71215	NM_005308	2869	Hs.524625	NM_005308	ENSG00000198873	GRK5	GPRK5	G protein-coupled receptor kinase 5	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr10-3445	chr10	121455735	121456735	+	15.4	1000	Intergenic	Intergenic	-29324	NM_001243195	22876	Hs.369755	NM_014937	ENSG00000198825	INPP5F	MSTP007|MSTPO47|SAC2|hSAC2	inositol polyphosphate-5-phosphatase F	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr10-3446	chr10	121755702	121756702	+	14.7	1000	Intergenic	L1PBa|LINE|L1	38177	NR_039830	100616322		NR_039830	ENSG00000265370	MIR4682	-	microRNA 4682	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr10-3449	chr10	122215285	122218449	+	62.7	3164	"exon (NM_001030059, exon 1 of 7)"	"exon (NM_001030059, exon 1 of 7)"	401	NM_001318169	196051	Hs.40479	NM_001030059	ENSG00000203805	PLPP4	DPPL2|PPAPDC1|PPAPDC1A	phospholipid phosphatase 4	protein-coding	62.73	6.31	9.941362916	1.16E-31
chr10-3451	chr10	122839637	122840637	+	15.4	1000	Intergenic	Intergenic	-229446	NR_033850	283089	Hs.568750	NR_033850	ENSG00000227165	WDR11-AS1	-	WDR11 antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr10-3453	chr10	123338159	123340405	+	37.8	2246	"intron (NM_001144914, intron 1 of 14)"	"intron (NM_001144914, intron 1 of 14)"	14199	NM_001144913	2263	Hs.533683	NM_000141	ENSG00000066468	FGFR2	BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25	fibroblast growth factor receptor 2	protein-coding	37.76	3.4	11.10588235	1.72E-20
chr10-3458	chr10	124017009	124018009	+	14.1	1000	Intergenic	Intergenic	-13302	NM_001318189	118663	Hs.422466	NM_144587	ENSG00000138152	BTBD16	C10orf87	BTB domain containing 16	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr10-3459	chr10	124210377	124211377	+	14.1	1000	Intergenic	MER5B|DNA|hAT-Charlie	-3302	NM_001099667	387715	Hs.120359	NM_001099667	ENSG00000254636	ARMS2	ARMD8	age-related maculopathy susceptibility 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr10-3461	chr10	124294128	124295128	+	15.4	1000	Intergenic	Intergenic	-25553	NM_017579	1755	Hs.279611	NM_004406	ENSG00000187908	DMBT1	GP340|SAG|SALSA|muclin	deleted in malignant brain tumors 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr10-3464	chr10	124886756	124887756	+	14.7	1000	Intergenic	AluSz6|SINE|Alu	-8311	NM_001105574	340784	Hs.531194	NM_001105574	ENSG00000188620	HMX3	NKX-5.1|NKX5.1|Nkx5-1	H6 family homeobox 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr10-3465	chr10	124893870	124894870	+	14.7	1000	Intergenic	CpG	-1197	NM_001105574	340784	Hs.531194	NM_001105574	ENSG00000188620	HMX3	NKX-5.1|NKX5.1|Nkx5-1	H6 family homeobox 3	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr10-3470	chr10	125233287	125234804	+	23	1517	Intergenic	Intergenic	-191826	NM_153442	2849	Hs.12751	NM_153442	ENSG00000154478	GPR26	-	G protein-coupled receptor 26	protein-coding	23.04	0.97	23.75257732	5.03E-19
chr10-3472	chr10	125258882	125259882	+	14.1	1000	Intergenic	Intergenic	-166489	NM_153442	2849	Hs.12751	NM_153442	ENSG00000154478	GPR26	-	G protein-coupled receptor 26	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr10-3474	chr10	125337261	125338766	+	21.1	1505	Intergenic	Intergenic	-87858	NM_153442	2849	Hs.12751	NM_153442	ENSG00000154478	GPR26	-	G protein-coupled receptor 26	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr10-3484	chr10	125647259	125648785	+	24.3	1526	"intron (NM_198148, intron 1 of 13)"	"intron (NM_198148, intron 1 of 13)"	3478	NM_198148	119587	Hs.656887	NM_198148	ENSG00000121898	CPXM2	CPX2|UNQ676	"carboxypeptidase X, M14 family member 2"	protein-coding	24.32	4.37	5.565217391	4.38E-09
chr10-3486	chr10	126067907	126069650	+	27.5	1743	Intergenic	CT-rich|Low_complexity|Low_complexity	38767	NM_001322968	4942	Hs.523332	NM_000274	ENSG00000065154	OAT	GACR|HOGA|OATASE|OKT	ornithine aminotransferase	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr10-3489	chr10	126137258	126140734	+	53.1	3476	promoter-TSS (NM_001146340)	promoter-TSS (NM_001146340)	-446	NM_001146340	390010	Hs.712041	NM_001146340	ENSG00000229544	NKX1-2	C10orf121|NKX-1.1|bB238F13.2	NK1 homeobox 2	protein-coding	53.13	7.77	6.837837838	1.02E-20
chr10-3491	chr10	126143223	126144223	+	14.7	1000	Intergenic	Intergenic	-5173	NM_001146340	390010	Hs.712041	NM_001146340	ENSG00000229544	NKX1-2	C10orf121|NKX-1.1|bB238F13.2	NK1 homeobox 2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr10-3493	chr10	126590012	126591832	+	28.2	1820	Intergenic	Intergenic	-39770	NM_017580	54764	Hs.595158	NM_017580	ENSG00000019995	ZRANB1	TRABID	zinc finger RANBP2-type containing 1	protein-coding	28.16	5.82	4.838487973	3.50E-09
chr10-3495	chr10	126707813	126708813	+	14.7	1000	"intron (NM_001083914, intron 3 of 10)"	L1M4|LINE|L1	8140	NM_022802	1488	Hs.501345	NM_001329	ENSG00000175029	CTBP2	-	C-terminal binding protein 2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr10-3496	chr10	126769479	126772673	+	49.3	3194	"intron (NM_001321013, intron 1 of 9)"	"intron (NM_001321013, intron 1 of 9)"	-49637	NR_036178	100423041		NR_036178	ENSG00000264572	MIR4296	-	microRNA 4296	ncRNA	49.29	6.8	7.248529412	3.87E-20
chr10-3499	chr10	126846488	126853714	+	92.8	7226	promoter-TSS (NM_001329)	promoter-TSS (NM_001329)	-471	NM_001083914	1488	Hs.501345	NM_001329	ENSG00000175029	CTBP2	-	C-terminal binding protein 2	protein-coding	92.81	14.08	6.591619318	2.99E-34
chr10-3508	chr10	127754970	127755970	+	14.7	1000	"intron (NM_003474, intron 12 of 22)"	"intron (NM_003474, intron 12 of 22)"	-93628	NR_102707	101410540	Hs.557889	NR_102707	ENSG00000233409	FANK1-AS1	-	FANK1 antisense RNA 1	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr10-3509	chr10	128057352	128058352	+	15.4	1000	"intron (NM_003474, intron 1 of 22)"	L2c|LINE|L2	19275	NM_001288975	8038	Hs.594351	NM_003474	ENSG00000148848	ADAM12	ADAM12-OT1|CAR10|MCMP|MCMPMltna|MLTN|MLTNA	ADAM metallopeptidase domain 12	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-3510	chr10	128332378	128333378	+	14.7	1000	Intergenic	MER31B|LTR|ERV1	-122868	NM_001004298	118611	Hs.587663	NM_001004298	ENSG00000154493	C10orf90	FATS|bA422P15.2	chromosome 10 open reading frame 90	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr10-3511	chr10	128535217	128536217	+	14.7	1000	Intergenic	Intergenic	-58261	NM_001290223	1793	Hs.159195	NM_001380	ENSG00000150760	DOCK1	DOCK180|ced5	dedicator of cytokinesis 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr10-3512	chr10	128803233	128804233	+	15.4	1000	"intron (NM_001380, intron 10 of 51)"	"intron (NM_001380, intron 10 of 51)"	190689	NM_001039762	642938	Hs.613882	NM_001039762	ENSG00000188916	FAM196A	C10orf141|INSYN2	family with sequence similarity 196 member A	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr10-3513	chr10	128850920	128851920	+	14.1	1000	"intron (NM_001380, intron 22 of 51)"	"intron (NM_001380, intron 22 of 51)"	143002	NM_001039762	642938	Hs.613882	NM_001039762	ENSG00000188916	FAM196A	C10orf141|INSYN2	family with sequence similarity 196 member A	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr10-3519	chr10	129108820	129109820	+	14.1	1000	"intron (NM_001380, intron 29 of 51)"	"intron (NM_001380, intron 29 of 51)"	-114898	NM_001039762	642938	Hs.613882	NM_001039762	ENSG00000188916	FAM196A	C10orf141|INSYN2	family with sequence similarity 196 member A	protein-coding	14.08	0	14.5040551	3.99E-13
chr10-3527	chr10	129838731	129840282	+	21.1	1551	"intron (NM_006504, intron 3 of 20)"	"intron (NM_006504, intron 3 of 20)"	-6307	NM_130435	5791	Hs.127022	NM_006504	ENSG00000132334	PTPRE	HPTPE|PTPE|R-PTP-EPSILON	"protein tyrosine phosphatase, receptor type E"	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr10-3528	chr10	129842151	129843412	+	14.7	1261	"intron (NM_006504, intron 3 of 20)"	"intron (NM_006504, intron 3 of 20)"	-3032	NM_130435	5791	Hs.127022	NM_006504	ENSG00000132334	PTPRE	HPTPE|PTPE|R-PTP-EPSILON	"protein tyrosine phosphatase, receptor type E"	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr10-353	chr10	72219701	72221300	+	27.5	1599	Intergenic	L2b|LINE|L2	-12796	NM_001329906	4838	Hs.370414	NM_018055	ENSG00000156574	NODAL	HTX5	nodal growth differentiation factor	protein-coding	27.52	1.94	14.18556701	2.90E-17
chr10-3530	chr10	129939263	129940263	+	14.7	1000	Intergenic	Intergenic	-15295	NM_001145966	4288	Hs.80976	NM_002417	ENSG00000148773	MKI67	KIA|MIB-|MIB-1|PPP1R105	marker of proliferation Ki-67	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr10-3533	chr10	130175179	130176179	+	15.4	1000	Intergenic	Intergenic	91465	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr10-3534	chr10	130217083	130218083	+	15.4	1000	Intergenic	Intergenic	133369	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr10-3538	chr10	130359207	130360207	+	14.7	1000	Intergenic	L1MC4|LINE|L1	275493	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr10-3539	chr10	130376308	130377308	+	14.7	1000	Intergenic	Intergenic	292594	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr10-3543	chr10	130652041	130653041	+	15.4	1000	Intergenic	Intergenic	568327	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr10-3552	chr10	131195582	131196582	+	14.1	1000	Intergenic	L2b|LINE|L2	-69366	NM_002412	4255	Hs.501522	NM_002412	ENSG00000170430	MGMT	-	O-6-methylguanine-DNA methyltransferase	protein-coding	14.08	0.49	28.73469388	3.99E-13
chr10-3557	chr10	131719539	131720539	+	14.7	1000	"intron (NM_001005463, intron 6 of 15)"	"intron (NM_001005463, intron 6 of 15)"	42052	NM_001005463	253738	Hs.591374	NM_001005463	ENSG00000108001	EBF3	COE3|EBF-3|O/E-2|OE-2	early B-cell factor 3	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr10-3560	chr10	132031077	132032077	+	14.7	1000	Intergenic	Intergenic	96904	NM_001321980	10539	Hs.42644	NM_006541	ENSG00000108010	GLRX3	GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3	glutaredoxin 3	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr10-3563	chr10	132349816	132351449	+	30.1	1633	Intergenic	Intergenic	410299	NR_036180	100422867		NR_036180	ENSG00000264803	MIR378C	mir-378c	microRNA 378c	ncRNA	30.08	4.85	6.202061856	2.13E-11
chr10-3566	chr10	132574610	132575610	+	15.4	1000	Intergenic	Intergenic	185821	NR_036180	100422867		NR_036180	ENSG00000264803	MIR378C	mir-378c	microRNA 378c	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr10-3567	chr10	132688479	132689479	+	14.7	1000	Intergenic	G-rich|Low_complexity|Low_complexity	71952	NR_036180	100422867		NR_036180	ENSG00000264803	MIR378C	mir-378c	microRNA 378c	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr10-3576	chr10	133131553	133132553	+	14.1	1000	Intergenic	MIR|SINE|MIR	-22069	NM_174937	256536	Hs.126575	NM_174937	ENSG00000176769	TCERG1L	-	transcription elongation regulator 1 like	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr10-3584	chr10	133633361	133634361	+	14.7	1000	Intergenic	L1M5|LINE|L1	-11326	NR_038365	399827	Hs.523353	NM_001001677	ENSG00000189275	LINC01164	-	long intergenic non-protein coding RNA 1164	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr10-3586	chr10	133822755	133823755	+	15.4	1000	Intergenic	MER4A1|LTR|ERV1	-27738	NM_004052	664	Hs.144873	NM_004052	ENSG00000176171	BNIP3	NIP3	BCL2 interacting protein 3	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr10-3588	chr10	133875578	133879138	+	51.2	3560	Intergenic	L1ME4a|LINE|L1	-2113	NM_001323088	282973	Hs.106254	NM_194303	ENSG00000188385	JAKMIP3	C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5	Janus kinase and microtubule interacting protein 3	protein-coding	51.21	7.77	6.590733591	6.93E-20
chr10-3593	chr10	134267843	134268843	+	15.4	1000	Intergenic	Intergenic	9629	NM_173541	170393	Hs.375059	NM_173541		C10orf91	bA432J24.4	chromosome 10 open reading frame 91	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr10-360	chr10	75685299	75686986	+	27.5	1687	Intergenic	Intergenic	-3607	NM_001001791	414236	Hs.585453	NM_001001791	ENSG00000222047	C10orf55	bA417O11.3	chromosome 10 open reading frame 55	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr10-3604	chr10	135063146	135065820	+	37.8	2674	Intergenic	Intergenic	-3094	NR_108079	101927671	Hs.741766	NR_108078	ENSG00000166917	MIR202HG	-	MIR202 host gene	ncRNA	37.76	5.82	6.487972509	1.70E-14
chr10-3607	chr10	135370429	135371429	+	15.4	1000	"intron (NM_001143763, intron 6 of 12)"	"intron (NM_001143763, intron 6 of 12)"	8209	NM_001143764	93426	Hs.553795	NM_130784	ENSG00000171772	SYCE1	C10orf94|CT76|POF12|SPGF15	synaptonemal complex central element protein 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr10-3608	chr10	135418978	135420270	+	19.2	1292	Intergenic	HERVK14-int|LTR|ERVK	20675	NM_001080998	441581	Hs.690471	NM_001080998	ENSG00000225899	FRG2B	-	FSHD region gene 2 family member B	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr10-365	chr10	80629592	80633194	+	59.5	3602	Intergenic	Intergenic	195812	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA	59.53	7.28	8.177197802	3.73E-26
chr10-374	chr10	103326459	103327711	+	23.7	1252	Intergenic	L2c|LINE|L2	20942	NM_001308382	27343	Hs.523230	NM_013274	ENSG00000166169	POLL	BETAN|POLKAPPA	DNA polymerase lambda	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr10-377	chr10	113018491	113019491	+	21.1	1000	Intergenic	Intergenic	182201	NM_000681	150	Hs.249159	NM_000681	ENSG00000150594	ADRA2A	ADRA2|ADRA2R|ADRAR|ALPHA2AAR|ZNF32	adrenoceptor alpha 2A	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr10-378	chr10	115723349	115729031	+	92.8	5682	Intergenic	L1MB2|LINE|L1	-77616	NM_000684	153	Hs.99913	NM_000684	ENSG00000043591	ADRB1	ADRB1R|B1AR|BETA1AR|RHR	adrenoceptor beta 1	protein-coding	92.81	15.53	5.976175145	1.17E-31
chr10-380	chr10	118419910	118421414	+	28.8	1504	Intergenic	Intergenic	8819	NM_144661	143379	Hs.121347	NM_144661	ENSG00000165863	C10orf82	-	chromosome 10 open reading frame 82	protein-coding	28.8	1.94	14.84536082	1.99E-18
chr10-382	chr10	119393295	119394295	+	21.1	1000	Intergenic	Intergenic	-89216	NR_002791	196047	Hs.312592	NR_002791	ENSG00000229847	EMX2OS	EMX2-AS1|NCRNA00045	EMX2 opposite strand/antisense RNA	ncRNA	21.12	3.88	5.443298969	1.44E-07
chr10-384	chr10	119665022	119666275	+	23	1253	Intergenic	Intergenic	140466	NM_014904	22841	Hs.173656	NM_014904	ENSG00000107560	RAB11FIP2	Rab11-FIP2|nRip11	RAB11 family interacting protein 2	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr10-392	chr10	129298222	129299560	+	30.1	1338	Intergenic	Intergenic	-48722	NM_001030013	594857	Hs.643423	NM_001030013	ENSG00000214285	NPS	-	neuropeptide S	protein-coding	30.08	2.91	10.33676976	7.13E-16
chr10-399	chr10	134762914	134765756	+	44.2	2842	"intron (NR_120627, intron 1 of 1)"	MER4D|LTR|ERV1	-3535	NR_120626	101927590	Hs.448598	NR_120626	ENSG00000232903	LINC01166	-	long intergenic non-protein coding RNA 1166	ncRNA	44.17	4.37	10.10755149	1.65E-22
chr10-408	chr10	7572794	7573794	+	21.1	1000	Intergenic	L2b|LINE|L2	88342	NM_032817	80760	Hs.498586	NM_030569	ENSG00000123243	ITIH5	ITI-HC5|PP14776	inter-alpha-trypsin inhibitor heavy chain family member 5	protein-coding	21.12	2.43	8.691358025	2.25E-10
chr10-41	chr10	98272165	98275446	+	75.5	3281	promoter-TSS (NM_012465)	promoter-TSS (NM_012465)	-122	NM_012465	7093	Hs.154296	NM_012465	ENSG00000095587	TLL2	-	tolloid like 2	protein-coding	75.53	15.53	4.863490019	4.37E-22
chr10-414	chr10	15399744	15400744	+	19.8	1000	"intron (NM_001010924, intron 1 of 7)"	AluJr|SINE|Alu	12814	NM_001010924	221061	Hs.66762	NM_001010924	ENSG00000148468	FAM171A1	C10orf38	family with sequence similarity 171 member A1	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr10-416	chr10	22625012	22627417	+	56.3	2405	Intergenic	Intergenic	-8160	NM_172242	9576	Hs.655170	NM_012443	ENSG00000077327	SPAG6	CT141|Repro-SA-1|pf16	sperm associated antigen 6	protein-coding	56.33	13.59	4.144959529	1.67E-14
chr10-434	chr10	69990368	69992508	+	35.2	2140	"5' UTR (NM_145178, exon 1 of 1)"	"5' UTR (NM_145178, exon 1 of 1)"	432	NM_145178	220202	Hs.175396	NM_145178	ENSG00000179774	ATOH7	Math5|NCRNA|PHPVAR|RNANC|bHLHa13	atonal bHLH transcription factor 7	protein-coding	35.2	6.31	5.57844691	4.08E-12
chr10-436	chr10	71810441	71815111	+	105	4670	"intron (NM_018649, intron 1 of 8)"	CpG	419	NM_018649	55506	Hs.499953	NM_018649	ENSG00000099284	H2AFY2	macroH2A2	H2A histone family member Y2	protein-coding	104.97	11.65	9.010300429	1.15E-48
chr10-442	chr10	79170779	79172210	+	26.2	1431	"intron (NM_001322832, intron 1 of 27)"	"intron (NM_001322832, intron 1 of 27)"	60864	NR_126365	101929286	Hs.568867	NR_126365		KCNMA1-AS3	-	KCNMA1 antisense RNA 3	ncRNA	26.24	5.82	4.508591065	7.99E-08
chr10-444	chr10	86367067	86368949	+	34.6	1882	Intergenic	Intergenic	183070	NM_001284242	54462	Hs.461988	NM_018999	ENSG00000107771	CCSER2	FAM190B|Gcap14|KIAA1128|bA486O22.1	coiled-coil serine rich protein 2	protein-coding	34.56	5.82	5.93814433	6.75E-13
chr10-445	chr10	87957892	87960324	+	39	2432	"intron (NM_017551, intron 3 of 15)"	L1MC4a|LINE|L1	65437	NR_029907	442911		NR_029907	ENSG00000199104	MIR346	MIRN346|hsa-mir-346|miR-346|miRNA346	microRNA 346	ncRNA	39.04	9.71	4.020597322	6.29E-10
chr10-447	chr10	88440799	88442742	+	37.8	1943	"intron (NM_001080115, intron 4 of 6)"	"intron (NM_001080115, intron 4 of 6)"	13344	NM_007078	11155	Hs.657271	NM_007078	ENSG00000122367	LDB3	CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP	LIM domain binding 3	protein-coding	37.76	4.85	7.78556701	1.78E-16
chr10-449	chr10	90967555	90968836	+	23	1281	Intergenic	Intergenic	-1124	NM_003956	9023	Hs.47357	NM_003956	ENSG00000138135	CH25H	C25H	cholesterol 25-hydroxylase	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr10-450	chr10	91195203	91196491	+	23	1288	"exon (NM_213606, exon 7 of 8)"	"exon (NM_213606, exon 7 of 8)"	-19901	NR_120614	101926906	Hs.568874	NR_120614	ENSG00000234452	SLC16A12-AS1	-	SLC16A12 antisense RNA 1	ncRNA	23.04	3.88	5.93814433	4.22E-09
chr10-451	chr10	91275952	91277655	+	31.4	1703	"intron (NM_213606, intron 2 of 7)"	AluJr|SINE|Alu	18510	NM_213606	387700	Hs.530338	NM_213606	ENSG00000152779	SLC16A12	CJMG|CRT2|CTRCT47|MCT12	solute carrier family 16 member 12	protein-coding	31.36	5.82	5.388316151	1.29E-10
chr10-466	chr10	118477387	118481135	+	55.7	3748	"intron (NM_001330164, intron 2 of 12)"	MIR|SINE|MIR	22824	NM_025015	259217	Hs.648448	NM_025015	ENSG00000165868	HSPA12A	-	heat shock protein family A (Hsp70) member 12A	protein-coding	55.69	8.74	6.371853547	1.56E-20
chr10-469	chr10	119311420	119312420	+	19.8	1000	Intergenic	CpG	-7341	NR_002791	196047	Hs.312592	NR_002791	ENSG00000229847	EMX2OS	EMX2-AS1|NCRNA00045	EMX2 opposite strand/antisense RNA	ncRNA	19.84	1.46	13.5890411	1.82E-12
chr10-473	chr10	126697692	126699456	+	35.2	1764	"intron (NM_001083914, intron 3 of 10)"	"intron (NM_001083914, intron 3 of 10)"	17879	NM_022802	1488	Hs.501345	NM_001329	ENSG00000175029	CTBP2	-	C-terminal binding protein 2	protein-coding	35.2	6.8	5.176470588	2.10E-11
chr10-475	chr10	127683841	127684841	+	20.5	1000	"intron (NM_145235, intron 4 of 10)"	"intron (NM_145235, intron 4 of 10)"	-22499	NR_102707	101410540	Hs.557889	NR_102707	ENSG00000233409	FANK1-AS1	-	FANK1 antisense RNA 1	ncRNA	20.48	0.49	41.79591837	5.97E-21
chr10-476	chr10	131758798	131760320	+	26.2	1522	"intron (NM_001005463, intron 4 of 15)"	"intron (NM_001005463, intron 4 of 15)"	2532	NM_001005463	253738	Hs.591374	NM_001005463	ENSG00000108001	EBF3	COE3|EBF-3|O/E-2|OE-2	early B-cell factor 3	protein-coding	26.24	3.88	6.762886598	1.00E-10
chr10-478	chr10	133324162	133328602	+	72.3	4440	Intergenic	AluSx|SINE|Alu	-216398	NM_174937	256536	Hs.126575	NM_174937	ENSG00000176769	TCERG1L	-	transcription elongation regulator 1 like	protein-coding	72.33	8.25	8.767272727	5.25E-33
chr10-479	chr10	133643038	133645996	+	39.7	2958	Intergenic	Intergenic	-21982	NR_038365	399827	Hs.523353	NM_001001677	ENSG00000189275	LINC01164	-	long intergenic non-protein coding RNA 1164	ncRNA	39.69	8.74	4.541189931	1.21E-11
chr10-481	chr10	458015	459573	+	25	1558	"intron (NM_014974, intron 8 of 36)"	"intron (NM_014974, intron 8 of 36)"	-130768	NR_106988	102465753		NR_106988	ENSG00000280494	MIR7641-2	B-ATF|hsa-mir-7641-2	microRNA 7641-2	ncRNA	24.96	4.85	5.146391753	2.27E-08
chr10-488	chr10	5556793	5557793	+	20.5	1000	"non-coding (NR_120496, exon 4 of 4)"	"non-coding (NR_120496, exon 4 of 4)"	-9559	NM_005185	810	Hs.239600	NM_005185	ENSG00000178363	CALML3	CLP	calmodulin like 3	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr10-492	chr10	13483679	13484679	+	19.2	1000	"intron (NM_001100912, intron 7 of 7)"	MIR3|SINE|MIR	60797	NM_001100912	222389	Hs.498740	NM_152751	ENSG00000165626	BEND7	C10orf30	BEN domain containing 7	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr10-494	chr10	14205544	14206860	+	27.5	1316	"intron (NR_134578, intron 2 of 3)"	"intron (NR_134578, intron 2 of 3)"	89919	NR_120638	101928453	Hs.650212	NR_120638		LOC101928453	-	uncharacterized LOC101928453	ncRNA	27.52	6.8	4.047058824	2.13E-07
chr10-497	chr10	44314823	44316358	+	28.8	1535	Intergenic	Intergenic	-25164	NR_033923	414260	Hs.351856	NR_033923	ENSG00000204187	LINC00619	C10orf136|bA168P8.1	long intergenic non-protein coding RNA 619	ncRNA	28.8	5.82	4.948453608	3.50E-09
chr10-498	chr10	44872850	44874414	+	25.6	1564	"3' UTR (NM_199168, exon 3 of 3)"	"3' UTR (NM_199168, exon 3 of 3)"	6913	NM_000609	6387	Hs.522891	NM_000609	ENSG00000107562	CXCL12	IRH|PBSF|SCYB12|SDF1|TLSF|TPAR1	C-X-C motif chemokine ligand 12	protein-coding	25.6	2.43	10.53497942	2.44E-14
chr10-499	chr10	45202261	45203519	+	21.8	1258	Intergenic	Intergenic	-203874	NM_001123376	643236	Hs.292788	NM_001123376	ENSG00000187783	TMEM72	C10orf127|KSP37	transmembrane protein 72	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr10-505	chr10	47083427	47085359	+	35.8	1932	"intron (NM_001278794, intron 1 of 1)"	L2b|LINE|L2	859	NM_001278794	5540	Hs.524719	NM_005972	ENSG00000204174	NPY4R	NPY4-R|PP1|PPYR1|Y4	neuropeptide Y receptor Y4	protein-coding	35.84	7.77	4.612612613	8.02E-11
chr10-511	chr10	48437777	48439963	+	41.6	2186	"5' UTR (NM_004962, exon 1 of 3)"	"5' UTR (NM_004962, exon 1 of 3)"	268	NM_004962	2662	Hs.2171	NM_004962	ENSG00000266524	GDF10	BIP|BMP-3b|BMP3B	growth differentiation factor 10	protein-coding	41.61	5.34	7.792134831	4.72E-18
chr10-513	chr10	50610110	50613166	+	51.8	3056	Intergenic	CT-rich|Low_complexity|Low_complexity	-7576	NM_001276451	644168	Hs.534530	NM_001080520	ENSG00000165606	DRGX	DRG11|PRRXL1	dorsal root ganglia homeobox	protein-coding	51.85	6.8	7.625	6.93E-22
chr10-518	chr10	71212069	71213069	+	18.6	1000	"intron (NM_012339, intron 1 of 7)"	"intron (NM_012339, intron 1 of 7)"	1343	NM_012339	23555	Hs.499941	NM_012339	ENSG00000099282	TSPAN15	2700063A19Rik|NET-7|NET7|TM4SF15	tetraspanin 15	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr10-522	chr10	73136374	73137374	+	19.8	1000	Intergenic	Intergenic	-19817	NM_001171931	64072	Hs.656032	NM_022124	ENSG00000107736	CDH23	CDHR23|USH1D	cadherin related 23	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr10-527	chr10	78786727	78788530	+	39	1803	"exon (NM_001322838, exon 17 of 30)"	"exon (NM_001322838, exon 17 of 30)"	-112961	NR_120654	101929310	Hs.666457	NR_120654	ENSG00000225497	KCNMA1-AS2	-	KCNMA1 antisense RNA 2	ncRNA	39.04	6.31	6.187004754	1.96E-14
chr10-528	chr10	80090013	80091013	+	19.8	1000	Intergenic	L1ME4a|LINE|L1	63428	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA	19.84	1.46	13.5890411	1.82E-12
chr10-533	chr10	86305946	86308820	+	42.2	2874	Intergenic	L1M3|LINE|L1	122445	NM_001284242	54462	Hs.461988	NM_018999	ENSG00000107771	CCSER2	FAM190B|Gcap14|KIAA1128|bA486O22.1	coiled-coil serine rich protein 2	protein-coding	42.25	8.74	4.83409611	5.23E-13
chr10-538	chr10	98153729	98154995	+	25.6	1266	"intron (NM_012465, intron 13 of 20)"	"intron (NM_012465, intron 13 of 20)"	-35240	NM_033207	93377	Hs.12449	NM_033207	ENSG00000197430	OPALIN	HTMP10|TMEM10|TMP10	oligodendrocytic myelin paranodal and inner loop protein	protein-coding	25.6	5.82	4.39862543	7.99E-08
chr10-542	chr10	99360009	99361009	+	20.5	1000	"intron (NM_138413, intron 5 of 6)"	"intron (NM_138413, intron 5 of 6)"	11059	NM_001009997	414157	Hs.662302	NM_001009997	ENSG00000203942	C10orf62	bA548K23.1	chromosome 10 open reading frame 62	protein-coding	20.48	2.43	8.427983539	2.25E-10
chr10-543	chr10	102393846	102394846	+	19.8	1000	Intergenic	Intergenic	98705	NM_017902	55662	Hs.500788	NM_017902	ENSG00000166135	HIF1AN	FIH1	hypoxia inducible factor 1 alpha subunit inhibitor	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr10-545	chr10	102626072	102627338	+	20.5	1266	Intergenic	Intergenic	-45621	NM_001136123	55719	Hs.447458	NM_018121	ENSG00000119906	SLF2	C10orf6|FAM178A	SMC5-SMC6 complex localization factor 2	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr10-563	chr10	115743721	115744721	+	19.2	1000	Intergenic	Intergenic	-59585	NM_000684	153	Hs.99913	NM_000684	ENSG00000043591	ADRB1	ADRB1R|B1AR|BETA1AR|RHR	adrenoceptor beta 1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr10-569	chr10	119290607	119294294	+	57.6	3687	"intron (NR_002791, intron 2 of 3)"	"intron (NR_002791, intron 2 of 3)"	-9506	NM_001165924	2018	Hs.202095	NM_004098	ENSG00000170370	EMX2	-	empty spiracles homeobox 2	protein-coding	57.61	11.16	5.16218638	3.55E-18
chr10-575	chr10	126215654	126216654	+	19.8	1000	"intron (NM_022126, intron 6 of 6)"	"intron (NM_022126, intron 6 of 6)"	65813	NM_001318332	64077	Hs.527748	NM_022126	ENSG00000107902	LHPP	HDHD2B	phospholysine phosphohistidine inorganic pyrophosphate phosphatase	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr10-584	chr10	133114313	133117672	+	46.1	3359	Intergenic	L2c|LINE|L2	-6008	NM_174937	256536	Hs.126575	NM_174937	ENSG00000176769	TCERG1L	-	transcription elongation regulator 1 like	protein-coding	46.09	9.22	4.998915401	1.85E-14
chr10-585	chr10	133214777	133215777	+	20.5	1000	Intergenic	L1M5|LINE|L1	-105293	NM_174937	256536	Hs.126575	NM_174937	ENSG00000176769	TCERG1L	-	transcription elongation regulator 1 like	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr10-591	chr10	1532769	1533769	+	19.2	1000	"intron (NM_018702, intron 1 of 9)"	"intron (NM_018702, intron 1 of 9)"	-35556	NR_033387	642394	Hs.568831	NM_001098830	ENSG00000205696	ADARB2-AS1	C10orf109|NCRNA00168|bA466B20.1	ADARB2 antisense RNA 1	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr10-593	chr10	2182314	2184213	+	37.8	1899	Intergenic	Intergenic	-64980	NR_106720	102465944		NR_106720	ENSG00000278069	MIR6072	hsa-mir-6072	microRNA 6072	ncRNA	37.76	5.34	7.071161049	1.96E-15
chr10-595	chr10	6041200	6042495	+	25.6	1295	Intergenic	Intergenic	-21697	NM_001243539	3601	Hs.445124	NM_002189	ENSG00000134470	IL15RA	CD215	interleukin 15 receptor subunit alpha	protein-coding	25.6	2.91	8.797250859	6.53E-13
chr10-597	chr10	7453685	7455791	+	42.9	2106	Intergenic	CpG-2560	-1290	NM_001029880	57713	Hs.407983	NM_001018039	ENSG00000198879	SFMBT2	-	Scm-like with four mbt domains 2	protein-coding	42.89	7.77	5.51994852	2.23E-14
chr10-602	chr10	13527954	13529476	+	29.4	1522	"intron (NM_001100912, intron 4 of 7)"	"intron (NM_001100912, intron 4 of 7)"	16261	NM_001100912	222389	Hs.498740	NM_152751	ENSG00000165626	BEND7	C10orf30	BEN domain containing 7	protein-coding	29.44	5.34	5.513108614	1.33E-10
chr10-608	chr10	29278506	29279506	+	19.8	1000	Intergenic	Intergenic	143669	NM_001278522	283080		NM_001278522		C10orf126	bA492M23.1	chromosome 10 open reading frame 126	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr10-614	chr10	43799408	43803244	+	49.3	3836	Intergenic	HERVK22-int|LTR|ERVK	-38959	NM_145313	221002	Hs.125293	NM_145313	ENSG00000198915	RASGEF1A	CG4853	RasGEF domain family member 1A	protein-coding	49.29	7.77	6.343629344	2.96E-18
chr10-634	chr10	47104854	47106112	+	23	1258	"intron (NR_033957, intron 1 of 3)"	"intron (NR_033957, intron 1 of 3)"	18758	NM_001278795	100996758	Hs.524719	NM_001278795	ENSG00000264717	CH17-360D5.1	-	neuropeptide Y receptor type 4-like	protein-coding	23.04	5.34	4.314606742	4.49E-07
chr10-639	chr10	47148923	47149923	+	21.1	1000	"intron (NR_033957, intron 1 of 3)"	"intron (NR_033957, intron 1 of 3)"	1977	NR_033957	643650	Hs.744313	NR_033957	ENSG00000264230	LINC00842	-	long intergenic non-protein coding RNA 842	ncRNA	21.12	4.85	4.354639175	2.52E-06
chr10-641	chr10	49766600	49767600	+	19.2	1000	"intron (NM_001347735, intron 2 of 8)"	"intron (NM_001347735, intron 2 of 8)"	46076	NM_001347737	58504	Hs.655672	NM_021226	ENSG00000128805	ARHGAP22	RhoGAP2|RhoGap22	Rho GTPase activating protein 22	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr10-644	chr10	71282426	71283426	+	19.8	1000	Intergenic	L1MB4|LINE|L1	50284	NM_020999	50674	Hs.532682	NM_020999	ENSG00000122859	NEUROG3	Atoh5|Math4B|NGN-3|bHLHa7|ngn3	neurogenin 3	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr10-645	chr10	71556047	71557398	+	25	1351	Intergenic	L2c|LINE|L2	-4922	NM_080802	1305	Hs.695934	NM_005203	ENSG00000197467	COL13A1	CMS19|COLXIIIA1	collagen type XIII alpha 1 chain	protein-coding	24.96	2.91	8.577319588	5.77E-12
chr10-650	chr10	72934787	72936270	+	18.6	1483	Intergenic	Intergenic	-36764	NM_001244889	219699	Hs.522997	NM_170744	ENSG00000107731	UNC5B	UNC5H2|p53RDL1	unc-5 netrin receptor B	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr10-651	chr10	72945001	72949428	+	72.3	4427	Intergenic	AluSx1|SINE|Alu	-25078	NM_001244889	219699	Hs.522997	NM_170744	ENSG00000107731	UNC5B	UNC5H2|p53RDL1	unc-5 netrin receptor B	protein-coding	72.33	10.68	6.77247191	1.53E-27
chr10-652	chr10	73132900	73134156	+	21.1	1256	Intergenic	MER115|DNA|hAT-Tip100	-23163	NM_001171931	64072	Hs.656032	NM_022124	ENSG00000107736	CDH23	CDHR23|USH1D	cadherin related 23	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr10-654	chr10	73255971	73258744	+	42.9	2773	"intron (NM_052836, intron 3 of 12)"	"intron (NM_052836, intron 3 of 12)"	14320	NR_120672	102723377	Hs.568789	NR_120672	ENSG00000223817	CDH23-AS1	C10orf106|NCRNA00223|bA327E2.3	CDH23 antisense RNA 1	ncRNA	42.89	10.19	4.209028459	2.83E-11
chr10-657	chr10	73333213	73334727	+	28.8	1514	"intron (NM_052836, intron 8 of 12)"	"intron (NM_052836, intron 8 of 12)"	-62293	NR_120672	102723377	Hs.568789	NR_120672	ENSG00000223817	CDH23-AS1	C10orf106|NCRNA00223|bA327E2.3	CDH23 antisense RNA 1	ncRNA	28.8	3.4	8.470588235	1.50E-13
chr10-658	chr10	73383969	73384969	+	19.8	1000	"intron (NM_052836, intron 11 of 12)"	AluJo|SINE|Alu	95109	NM_001164375	414152	Hs.568788	NM_001164375	ENSG00000214688	C10orf105	-	chromosome 10 open reading frame 105	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr10-662	chr10	80143901	80144901	+	19.8	1000	Intergenic	MER117|DNA|hAT-Charlie	117316	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA	19.84	4.85	4.090721649	1.08E-05
chr10-665	chr10	80770340	80771340	+	19.2	1000	"intron (NR_015429, intron 3 of 7)"	MIRb|SINE|MIR	56365	NR_024429	283050	Hs.309176	NR_015429	ENSG00000224596	ZMIZ1-AS1	-	ZMIZ1 antisense RNA 1	ncRNA	19.2	0.97	19.79381443	5.65E-15
chr10-666	chr10	82340923	82342577	+	28.8	1654	"intron (NM_001145719, intron 3 of 6)"	"intron (NM_001145719, intron 3 of 6)"	41175	NM_001145719	387694	Hs.147643	NM_207372	ENSG00000178217	SH2D4B	-	SH2 domain containing 4B	protein-coding	28.8	5.82	4.948453608	3.50E-09
chr10-671	chr10	99745609	99746866	+	23.7	1257	"intron (NM_018058, intron 2 of 14)"	Charlie18a|DNA|hAT-Charlie	44348	NM_001206528	55118	Hs.500736	NM_018058	ENSG00000095713	CRTAC1	ASPIC|ASPIC1|CEP-68	cartilage acidic protein 1	protein-coding	23.68	4.37	5.418764302	2.46E-08
chr10-674	chr10	102495649	102508593	+	268.2	12944	"intron (NM_001304569, intron 1 of 10)"	CpG	-3347	NM_003988	5076	Hs.155644	NM_000278	ENSG00000075891	PAX2	FSGS7|PAPRS	paired box 2	protein-coding	268.19	28.15	9.527175844	2.11E-125
chr10-677	chr10	102977590	102987185	+	140.2	9595	Intergenic	CpG	6330	NM_006562	10660	Hs.37128	NM_006562	ENSG00000138136	LBX1	HPX-6|HPX6|LBX1H|homeobox	ladybird homeobox 1	protein-coding	140.18	19.42	7.218331617	1.08E-54
chr10-682	chr10	105612633	105617235	+	88.3	4602	"intron (NM_014631, intron 1 of 13)"	CpG	230	NM_014631	9644	Hs.678727	NM_014631	ENSG00000107957	SH3PXD2A	FISH|SH3MD1|TKS5	SH3 and PX domains 2A	protein-coding	88.33	12.62	6.999207607	1.33E-34
chr10-690	chr10	119000705	119001997	+	23.7	1292	"intron (NM_003054, intron 2 of 15)"	CpG-3327	767	NM_003054	6571	Hs.596992	NM_003054	ENSG00000165646	SLC18A2	SVAT|SVMT|VAT2|VMAT2	solute carrier family 18 member A2	protein-coding	23.68	5.34	4.434456929	4.49E-07
chr10-694	chr10	123858305	123859305	+	19.8	1000	"intron (NM_001291877, intron 5 of 19)"	"intron (NM_001291877, intron 5 of 19)"	-13749	NM_001291879	10579	Hs.501252	NM_006997	ENSG00000138162	TACC2	AZU-1|ECTACC	transforming acidic coiled-coil containing protein 2	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr10-697	chr10	126797873	126798873	+	17.9	1000	"intron (NM_001321013, intron 1 of 9)"	"intron (NM_001321013, intron 1 of 9)"	49314	NM_001290215	1488	Hs.501345	NM_001329	ENSG00000175029	CTBP2	-	C-terminal binding protein 2	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr10-704	chr10	134645418	134646418	+	17.9	1000	"intron (NM_001200049, intron 50 of 57)"	L1ME1|LINE|L1	-46381	NM_177400	84504	Hs.134013	NM_177400	ENSG00000148826	NKX6-2	GTX|NKX6.2|NKX6B	NK6 homeobox 2	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr10-708	chr10	134861308	134863867	+	37.1	2559	Intergenic	Intergenic	37614	NR_111905	100128127	Hs.694139	NR_111905		ADGRA1-AS1	GPR123-AS1	adhesion G protein-coupled receptor A1 antisense RNA 1	ncRNA	37.12	0.97	38.26804124	1.74E-35
chr10-709	chr10	408263	409518	+	20.5	1255	"intron (NM_014974, intron 21 of 36)"	"intron (NM_014974, intron 21 of 36)"	-80864	NR_106988	102465753		NR_106988	ENSG00000280494	MIR7641-2	B-ATF|hsa-mir-7641-2	microRNA 7641-2	ncRNA	20.48	2.43	8.427983539	2.25E-10
chr10-712	chr10	1453613	1456034	+	44.2	2421	"intron (NM_018702, intron 1 of 9)"	"intron (NM_018702, intron 1 of 9)"	-114002	NR_033387	642394	Hs.568831	NM_001098830	ENSG00000205696	ADARB2-AS1	C10orf109|NCRNA00168|bA466B20.1	ADARB2 antisense RNA 1	ncRNA	44.17	9.71	4.548918641	1.81E-12
chr10-716	chr10	3291671	3292981	+	19.8	1310	Intergenic	Intergenic	-68561	NR_131187	105376360	Hs.212226	NR_131187		LOC105376360	-	uncharacterized LOC105376360	ncRNA	19.84	4.37	4.540045767	3.16E-06
chr10-717	chr10	3837929	3838929	+	18.6	1000	Intergenic	Intergenic	-10956	NM_001160124	1316	Hs.4055	NM_001300	ENSG00000067082	KLF6	BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9	Kruppel like factor 6	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr10-718	chr10	5542323	5547192	+	68.5	4869	Intergenic	Intergenic	-3224	NM_017422	51806	Hs.180142	NM_017422	ENSG00000178372	CALML5	CLSP	calmodulin like 5	protein-coding	68.49	9.71	7.053553038	5.93E-27
chr10-719	chr10	5581960	5583289	+	23	1329	Intergenic	Intergenic	-14415	NR_120497	100132159	Hs.239600	NR_120496		CALML3-AS1	-	CALML3 antisense RNA 1	ncRNA	23.04	4.85	4.750515464	1.15E-07
chr10-722	chr10	6779503	6780503	+	18.6	1000	"intron (NR_138480, intron 1 of 1)"	"intron (NR_138480, intron 1 of 1)"	659	NR_138480	108570035	Hs.568834	NR_138480		LINP1	-	lncRNA in nonhomologous end joining pathway 1	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr10-723	chr10	7680543	7682004	+	21.1	1461	"intron (NM_001001851, intron 4 of 11)"	LTR65|LTR|ERV1	-19637	NM_032817	80760	Hs.498586	NM_030569	ENSG00000123243	ITIH5	ITI-HC5|PP14776	inter-alpha-trypsin inhibitor heavy chain family member 5	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr10-726	chr10	8083541	8086199	+	48.6	2658	Intergenic	Intergenic	9584	NR_104329	399717	Hs.158992	NM_207423	ENSG00000197308	GATA3-AS1	-	GATA3 antisense RNA 1	ncRNA	48.65	7.28	6.682692308	3.68E-19
chr10-737	chr10	25461167	25462749	+	26.9	1582	"intron (NR_027333, intron 1 of 1)"	"intron (NR_027333, intron 1 of 1)"	-2332	NM_020752	57512	Hs.499108	NM_020752	ENSG00000151025	GPR158	-	G protein-coupled receptor 158	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr10-739	chr10	30930994	30935934	+	79.4	4940	Intergenic	L1PA13|LINE|L1	-14817	NM_183058	119180	Hs.522610	NM_183058	ENSG00000151033	LYZL2	LYZD2	lysozyme like 2	protein-coding	79.37	13.11	6.054157132	5.81E-28
chr10-744	chr10	33850902	33852744	+	32.6	1842	Intergenic	Intergenic	209785	NR_038932	100505583	Hs.568804	NR_038932	ENSG00000261683	LINC00838	-	long intergenic non-protein coding RNA 838	ncRNA	32.64	3.88	8.412371134	3.92E-15
chr10-745	chr10	35974927	35975927	+	19.2	1000	Intergenic	MIR3|SINE|MIR	-45065	NM_031866	8325	Hs.302634	NM_031866	ENSG00000177283	FZD8	FZ-8|hFZ8	frizzled class receptor 8	protein-coding	19.2	2.43	7.901234568	1.91E-09
chr10-748	chr10	44144948	44145948	+	18.6	1000	"intron (NR_038867, intron 1 of 4)"	L2c|LINE|L2	-1122	NM_001324166	7580	Hs.522885	NM_006973	ENSG00000169740	ZNF32	KOX30	zinc finger protein 32	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr10-760	chr10	47043319	47045285	+	36.5	1966	Intergenic	L2b|LINE|L2	-39232	NM_005972	5540	Hs.524719	NM_005972	ENSG00000204174	NPY4R	NPY4-R|PP1|PPYR1|Y4	neuropeptide Y receptor Y4	protein-coding	36.48	7.28	5.010989011	1.89E-11
chr10-768	chr10	54071842	54073302	+	23.7	1460	"intron (NR_038277, intron 2 of 5)"	"intron (NR_038277, intron 2 of 5)"	1316	NR_038277	100506939	Hs.584791	NR_038277		PRKG1-AS1	-	PRKG1 antisense RNA 1	ncRNA	23.68	3.88	6.103092784	4.22E-09
chr10-770	chr10	68686796	68688617	+	35.2	1821	"exon (NM_178011, exon 2 of 3)"	"exon (NM_178011, exon 2 of 3)"	1914	NM_178011	347731	Hs.652155	NM_178011	ENSG00000198739	LRRTM3	-	leucine rich repeat transmembrane neuronal 3	protein-coding	35.2	3.4	10.35294118	1.99E-18
chr10-775	chr10	71440890	71442181	+	28.2	1291	Intergenic	Intergenic	51532	NM_145306	219738	Hs.522992	NM_145306	ENSG00000171224	C10orf35	-	chromosome 10 open reading frame 35	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr10-777	chr10	71688474	71690102	+	26.2	1628	"intron (NM_001130103, intron 27 of 39)"	"intron (NM_001130103, intron 27 of 39)"	-123069	NM_018649	55506	Hs.499953	NM_018649	ENSG00000099284	H2AFY2	macroH2A2	H2A histone family member Y2	protein-coding	26.24	3.4	7.717647059	9.95E-12
chr10-778	chr10	72041659	72044601	+	42.9	2942	"intron (NM_022146, intron 1 of 3)"	"intron (NM_022146, intron 1 of 3)"	320	NM_022146	64106	Hs.302026	NM_022146	ENSG00000148734	NPFFR1	GPR147|NPFF1|NPFF1R1|OT7T022	neuropeptide FF receptor 1	protein-coding	42.89	8.74	4.907322654	5.23E-13
chr10-783	chr10	73202255	73203826	+	26.2	1571	"intron (NM_052836, intron 2 of 12)"	"intron (NM_052836, intron 2 of 12)"	46349	NM_022124	64072	Hs.656032	NM_022124	ENSG00000107736	CDH23	CDHR23|USH1D	cadherin related 23	protein-coding	26.24	5.34	4.913857678	2.00E-08
chr10-792	chr10	77601053	77602053	+	17.9	1000	"intron (NM_032024, intron 1 of 5)"	"intron (NM_032024, intron 1 of 5)"	59034	NM_032024	83938	Hs.118161	NM_032024	ENSG00000148655	C10orf11	CDA017	chromosome 10 open reading frame 11	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr10-794	chr10	80180486	80181486	+	18.6	1000	Intergenic	Intergenic	153901	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA	18.56	4.37	4.247139588	1.41E-05
chr10-799	chr10	85886804	85888136	+	19.2	1332	Intergenic	L2b|LINE|L2	-11715	NM_014394	27069	Hs.352656	NM_014394	ENSG00000165678	GHITM	DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5	growth hormone inducible transmembrane protein	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr10-800	chr10	86347933	86348933	+	18.6	1000	Intergenic	Intergenic	163495	NM_001284242	54462	Hs.461988	NM_018999	ENSG00000107771	CCSER2	FAM190B|Gcap14|KIAA1128|bA486O22.1	coiled-coil serine rich protein 2	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr10-801	chr10	88430339	88433912	+	58.9	3573	"intron (NM_001080115, intron 1 of 6)"	"intron (NM_001080115, intron 1 of 6)"	3699	NM_007078	11155	Hs.657271	NM_007078	ENSG00000122367	LDB3	CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP	LIM domain binding 3	protein-coding	58.89	7.77	7.579150579	5.01E-25
chr10-803	chr10	91686797	91687797	+	18.6	1000	"intron (NR_110655, intron 3 of 3)"	LTR37B|LTR|ERV1	29833	NR_110655	101926924	Hs.500498	NR_110655	ENSG00000226159	LINC01375	-	long intergenic non-protein coding RNA 1375	ncRNA	18.56	4.37	4.247139588	1.41E-05
chr10-805	chr10	95573856	95574856	+	19.2	1000	Intergenic	Intergenic	56790	NM_005097	9211	Hs.533670	NM_005097	ENSG00000108231	LGI1	ADLTE|ADPAEF|ADPEAF|EPITEMPIN|EPT|ETL1|IB1099	leucine rich glioma inactivated 1	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr10-806	chr10	97206426	97207426	+	17.9	1000	"intron (NM_015385, intron 2 of 24)"	AluSx1|SINE|Alu	-5989	NM_001290296	10580	Hs.38621	NM_006434	ENSG00000095637	SORBS1	CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1	sorbin and SH3 domain containing 1	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr10-812	chr10	102565492	102570873	+	78.1	5381	"intron (NM_003989, intron 6 of 9)"	"intron (NM_003989, intron 6 of 9)"	62714	NM_003989	5076	Hs.155644	NM_000278	ENSG00000075891	PAX2	FSGS7|PAPRS	paired box 2	protein-coding	78.09	10.68	7.311797753	8.51E-32
chr10-814	chr10	102621021	102624132	+	45.4	3111	Intergenic	AluSx1|SINE|Alu	-49750	NM_001136123	55719	Hs.447458	NM_018121	ENSG00000119906	SLF2	C10orf6|FAM178A	SMC5-SMC6 complex localization factor 2	protein-coding	45.45	6.8	6.683823529	1.33E-17
chr10-824	chr10	105808986	105810636	+	24.3	1650	"intron (NM_000494, intron 28 of 55)"	"intron (NM_000494, intron 28 of 55)"	-1867	NR_030760	100126326		NR_030760	ENSG00000065618	MIR936	MIRN936|hsa-mir-936	microRNA 936	ncRNA	24.32	1.94	12.53608247	5.33E-15
chr10-827	chr10	114121790	114122790	+	18.6	1000	Intergenic	MIRb|SINE|MIR	-5937	NR_028134	390003	Hs.534691	NR_028134	ENSG00000243316	GUCY2GP	GUCY2G	"guanylate cyclase 2G, pseudogene"	pseudo	18.56	1.94	9.567010309	9.53E-10
chr10-830	chr10	115527417	115528417	+	16.6	1000	"intron (NM_001193434, intron 5 of 12)"	"intron (NM_001193434, intron 5 of 12)"	3339	NM_182601	79949	Hs.228320	NM_024889	ENSG00000148735	PLEKHS1	C10orf81|HEL185|bA211N11.2	pleckstrin homology domain containing S1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr10-838	chr10	115782416	115783416	+	17.9	1000	Intergenic	Intergenic	-20890	NM_000684	153	Hs.99913	NM_000684	ENSG00000043591	ADRB1	ADRB1R|B1AR|BETA1AR|RHR	adrenoceptor beta 1	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr10-840	chr10	116014909	116015909	+	17.9	1000	"intron (NM_001272046, intron 4 of 13)"	"intron (NM_001272046, intron 4 of 13)"	16036	NM_001320804	340706	Hs.197741	NM_198496	ENSG00000165816	VWA2	AMACO|CCSP-2|NET42	von Willebrand factor A domain containing 2	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr10-841	chr10	118921180	118926359	+	104.3	5179	"intron (NR_121650, intron 1 of 1)"	"intron (NR_121650, intron 1 of 1)"	3516	NR_037436	100500893		NR_037436	ENSG00000266782	MIR3663	-	microRNA 3663	ncRNA	104.33	23.3	4.477682403	3.21E-27
chr10-844	chr10	122023313	122024313	+	18.6	1000	Intergenic	Intergenic	-192653	NR_134516	196051	Hs.40479	NM_001030059	ENSG00000203805	PLPP4	DPPL2|PPAPDC1|PPAPDC1A	phospholipid phosphatase 4	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr10-845	chr10	124549281	124550281	+	17.9	1000	"intron (NR_003570, intron 22 of 27)"	"intron (NR_003570, intron 22 of 27)"	33571	NR_003570	375940	Hs.650695	NM_198577	ENSG00000176584	DMBT1P1	-	deleted in malignant brain tumors 1 pseudogene 1	pseudo	17.92	2.43	7.374485597	1.53E-08
chr10-850	chr10	125189899	125190899	+	19.2	1000	Intergenic	Intergenic	-235472	NM_153442	2849	Hs.12751	NM_153442	ENSG00000154478	GPR26	-	G protein-coupled receptor 26	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr10-853	chr10	125850686	125854583	+	62.1	3897	promoter-TSS (NM_015892)	promoter-TSS (NM_015892)	489	NM_001270764	51363	Hs.287537	NM_014863	ENSG00000182022	CHST15	BRAG|GALNAC4S-6ST	carbohydrate sulfotransferase 15	protein-coding	62.09	6.8	9.130882353	2.80E-29
chr10-856	chr10	126832324	126834094	+	27.5	1770	"intron (NM_001290214, intron 1 of 10)"	"intron (NM_001290214, intron 1 of 10)"	14478	NM_001290215	1488	Hs.501345	NM_001329	ENSG00000175029	CTBP2	-	C-terminal binding protein 2	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr10-861	chr10	130308573	130309573	+	18.6	1000	Intergenic	Intergenic	224859	NR_120619	101927381	Hs.523342	NR_120619	ENSG00000280953	LINC01163	TCONS_00017722	long intergenic non-protein coding RNA 1163	ncRNA	18.56	0.49	37.87755102	9.96E-18
chr10-865	chr10	131161253	131163509	+	37.1	2256	Intergenic	AluJr4|SINE|Alu	-103067	NM_002412	4255	Hs.501522	NM_002412	ENSG00000170430	MGMT	-	O-6-methylguanine-DNA methyltransferase	protein-coding	37.12	6.8	5.458823529	7.17E-13
chr10-866	chr10	131171881	131172881	+	18.6	1000	Intergenic	Intergenic	-93067	NM_002412	4255	Hs.501522	NM_002412	ENSG00000170430	MGMT	-	O-6-methylguanine-DNA methyltransferase	protein-coding	18.56	1.46	12.71232877	2.41E-11
chr10-867	chr10	132066426	132067426	+	18.6	1000	Intergenic	Intergenic	132253	NM_001321980	10539	Hs.42644	NM_006541	ENSG00000108010	GLRX3	GLRX4|GRX3|GRX4|PICOT|TXNL2|TXNL3	glutaredoxin 3	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr10-870	chr10	133260620	133261620	+	18.6	1000	Intergenic	Intergenic	-151136	NM_174937	256536	Hs.126575	NM_174937	ENSG00000176769	TCERG1L	-	transcription elongation regulator 1 like	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr10-873	chr10	133478462	133480118	+	30.1	1656	Intergenic	Intergenic	143245	NR_038365	399827	Hs.523353	NM_001001677	ENSG00000189275	LINC01164	-	long intergenic non-protein coding RNA 1164	ncRNA	30.08	4.85	6.202061856	2.13E-11
chr10-874	chr10	133854536	133855536	+	18.6	1000	Intergenic	Intergenic	-24435	NM_001323088	282973	Hs.106254	NM_194303	ENSG00000188385	JAKMIP3	C10orf14|C10orf39|Jamip3|NECC2|bA140A10.5	Janus kinase and microtubule interacting protein 3	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr10-876	chr10	133989345	133990345	+	19.2	1000	"intron (NM_001105521, intron 24 of 24)"	"intron (NM_001105521, intron 24 of 24)"	-10569	NM_006426	10570	Hs.100058	NM_006426	ENSG00000151640	DPYSL4	CRMP3|DRP-4|ULIP4	dihydropyrimidinase like 4	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr10-877	chr10	134332195	134337351	+	67.8	5156	Intergenic	Intergenic	-16510	NM_005539	3632	Hs.523360	NM_005539	ENSG00000068383	INPP5A	5PTASE	inositol polyphosphate-5-phosphatase A	protein-coding	67.85	10.68	6.352996255	4.41E-25
chr10-879	chr10	135055747	135056747	+	17.3	1000	TTS (NM_014468)	TTS (NM_014468)	4839	NM_014468	27287	Hs.125231	NM_014468	ENSG00000151650	VENTX	HPX42B|NA88A|VENTX2	VENT homeobox	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr10-885	chr10	1577235	1578235	+	17.9	1000	"intron (NR_033387, intron 1 of 1)"	"intron (NR_033387, intron 1 of 1)"	8910	NR_033387	642394	Hs.568831	NM_001098830	ENSG00000205696	ADARB2-AS1	C10orf109|NCRNA00168|bA466B20.1	ADARB2 antisense RNA 1	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr10-893	chr10	6108329	6109658	+	21.8	1329	Intergenic	Intergenic	-4660	NM_001308242	3559	Hs.231367	NM_000417	ENSG00000134460	IL2RA	CD25|IDDM10|IL2R|IMD41|TCGFR|p55	interleukin 2 receptor subunit alpha	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr10-894	chr10	6123152	6127013	+	57	3861	Intergenic	Intergenic	-5867	NM_032905	84991	Hs.498548	NM_032905	ENSG00000134453	RBM17	SPF45	RNA binding motif protein 17	protein-coding	56.97	13.59	4.19205298	1.67E-14
chr10-895	chr10	6774332	6775332	+	18.6	1000	Intergenic	L2c|LINE|L2	-4512	NR_138480	108570035	Hs.568834	NR_138480		LINP1	-	lncRNA in nonhomologous end joining pathway 1	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr10-896	chr10	6935982	6936982	+	17.9	1000	Intergenic	Intergenic	114922	NR_038291	100507127	Hs.498571	NR_038291	ENSG00000238266	LINC00707	-	long intergenic non-protein coding RNA 707	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr10-898	chr10	12978214	12979214	+	17.3	1000	"intron (NM_001282658, intron 6 of 6)"	AluJr4|SINE|Alu	64990	NM_031455	83643	Hs.498720	NM_031455	ENSG00000151468	CCDC3	-	coiled-coil domain containing 3	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr10-899	chr10	12981855	12983419	+	25.6	1564	"intron (NM_001282658, intron 6 of 6)"	"intron (NM_001282658, intron 6 of 6)"	61067	NM_031455	83643	Hs.498720	NM_031455	ENSG00000151468	CCDC3	-	coiled-coil domain containing 3	protein-coding	25.6	1.46	17.53424658	1.83E-18
chr10-903	chr10	13625006	13626006	+	18.6	1000	Intergenic	Intergenic	-3433	NM_003675	8559	Hs.660649	NM_003675	ENSG00000165630	PRPF18	PRP18|hPrp18	pre-mRNA processing factor 18	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr10-904	chr10	13949555	13950555	+	18.6	1000	"intron (NM_018027, intron 2 of 24)"	AluSq|SINE|Alu	64314	NM_001318337	55691	Hs.330463	NM_018027	ENSG00000151474	FRMD4A	CCAFCA|FRMD4|bA295P9.4	FERM domain containing 4A	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr10-909	chr10	21806430	21807757	+	23.7	1327	"5' UTR (NM_207371, exon 4 of 4)"	"5' UTR (NM_207371, exon 4 of 4)"	7518	NM_207371	387640	Hs.350848	NM_207371	ENSG00000180592	SKIDA1	C10orf140|DLN-1	SKI/DACH domain containing 1	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr10-912	chr10	23491937	23493216	+	19.2	1279	Intergenic	Intergenic	11116	NM_178161	256297	Hs.351503	NM_178161	ENSG00000168267	PTF1A	PACA|PAGEN2|PTF1-p48|bHLHa29	"pancreas specific transcription factor, 1a"	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr10-915	chr10	27677169	27678169	+	18.6	1000	Intergenic	L1MC1|LINE|L1	25628	NM_001034842	374308	Hs.631832	NM_001034842	ENSG00000182077	PTCHD3	PTR	patched domain containing 3	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr10-929	chr10	45365159	45366712	+	23.7	1553	"intron (NR_033842, intron 2 of 7)"	MLT1A0|LTR|ERVL-MaLR	-40829	NM_001123376	643236	Hs.292788	NM_001123376	ENSG00000187783	TMEM72	C10orf127|KSP37	transmembrane protein 72	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr10-94	chr10	50605145	50606767	+	36.5	1622	Intergenic	CpG-2821	-1894	NM_001276451	644168	Hs.534530	NM_001080520	ENSG00000165606	DRGX	DRG11|PRRXL1	dorsal root ganglia homeobox	protein-coding	36.48	5.82	6.268041237	1.09E-13
chr10-950	chr10	62702989	62704256	+	19.8	1267	"intron (NR_024554, intron 2 of 11)"	CpG	411	NM_001242359	9886	Hs.737374	NM_014836	ENSG00000072422	RHOBTB1	-	Rho related BTB domain containing 1	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr10-952	chr10	71218780	71219780	+	17.9	1000	"intron (NM_012339, intron 1 of 7)"	L2a|LINE|L2	8054	NM_012339	23555	Hs.499941	NM_012339	ENSG00000099282	TSPAN15	2700063A19Rik|NET-7|NET7|TM4SF15	tetraspanin 15	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr10-959	chr10	72560293	72561593	+	22.4	1300	Intergenic	AluSz6|SINE|Alu	-14761	NM_003901	8879	Hs.499984	NM_003901	ENSG00000166224	SGPL1	S1PL|SPL	sphingosine-1-phosphate lyase 1	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr10-961	chr10	72980162	72981162	+	18.6	1000	"intron (NM_170744, intron 1 of 16)"	MIR3|SINE|MIR	-2677	NR_038453	728978	Hs.646725	NR_038453	ENSG00000237512	UNC5B-AS1	-	UNC5B antisense RNA 1	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr10-964	chr10	73152374	73157944	+	80	5570	Intergenic	L2b|LINE|L2	-1532	NM_001171931	64072	Hs.656032	NM_022124	ENSG00000107736	CDH23	CDHR23|USH1D	cadherin related 23	protein-coding	80.01	13.11	6.102974828	5.81E-28
chr10-972	chr10	73727860	73729371	+	23.7	1511	"intron (NM_004273, intron 1 of 2)"	"intron (NM_004273, intron 1 of 2)"	4495	NM_004273	9469	Hs.158304	NM_004273	ENSG00000122863	CHST3	C6ST|C6ST1|HSD	carbohydrate sulfotransferase 3	protein-coding	23.68	3.4	6.964705882	5.45E-10
chr10-975	chr10	77536602	77537602	+	18.6	1000	"intron (NR_131178, intron 1 of 7)"	"intron (NR_131178, intron 1 of 7)"	-5417	NM_032024	83938	Hs.118161	NM_032024	ENSG00000148655	C10orf11	CDA017	chromosome 10 open reading frame 11	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr10-977	chr10	78839400	78840400	+	16.6	1000	"intron (NM_001322832, intron 12 of 27)"	"intron (NM_001322832, intron 12 of 27)"	-60689	NR_120654	101929310	Hs.666457	NR_120654	ENSG00000225497	KCNMA1-AS2	-	KCNMA1 antisense RNA 2	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr10-981	chr10	79419305	79420594	+	21.8	1289	Intergenic	Intergenic	-22372	NM_001271522	3778	Hs.144795	NM_002247	ENSG00000156113	KCNMA1	BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1	potassium calcium-activated channel subfamily M alpha 1	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr10-982	chr10	79524175	79525175	+	17.3	1000	Intergenic	Intergenic	-127098	NM_001271522	3778	Hs.144795	NM_002247	ENSG00000156113	KCNMA1	BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1	potassium calcium-activated channel subfamily M alpha 1	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr10-983	chr10	79530763	79532576	+	32.6	1813	Intergenic	MIR3|SINE|MIR	-134092	NM_001271522	3778	Hs.144795	NM_002247	ENSG00000156113	KCNMA1	BKTM|KCa1.1|MaxiK|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1	potassium calcium-activated channel subfamily M alpha 1	protein-coding	32.64	0.97	33.64948454	2.99E-29
chr10-986	chr10	80290441	80291441	+	17.3	1000	Intergenic	Intergenic	263856	NR_073447	414243	Hs.55047	NR_073447	ENSG00000230417	LINC00595	C10orf101	long intergenic non-protein coding RNA 595	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr10-990	chr10	81152689	81153944	+	23	1255	"intron (NM_153367, intron 3 of 3)"	"intron (NM_153367, intron 3 of 3)"	46096	NM_005729	10105	Hs.381072	NM_005729	ENSG00000108179	PPIF	CYP3|CyP-M|Cyp-D|CypD	peptidylprolyl isomerase F	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr10-991	chr10	82115365	82117044	+	26.9	1679	promoter-TSS (NM_001270041)	promoter-TSS (NM_001270041)	310	NM_138812	143241	Hs.407751	NM_138812	ENSG00000170788	DYDC1	DPY30D1	DPY30 domain containing 1	protein-coding	26.88	0.97	27.71134021	2.75E-23
chr10-993	chr10	86021520	86022520	+	17.9	1000	Intergenic	Intergenic	17211	NM_001012720	5995	Hs.1544	NM_002921	ENSG00000148604	RGR	RP44	retinal G protein coupled receptor	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr10-997	chr10	88101502	88102502	+	18.6	1000	"intron (NM_017551, intron 2 of 15)"	"intron (NM_017551, intron 2 of 15)"	24248	NM_017551	2894	Hs.530653	NM_017551	ENSG00000182771	GRID1	GluD1	glutamate ionotropic receptor delta type subunit 1	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr11-1002	chr11	123280800	123282080	+	21.1	1280	Intergenic	Intergenic	-29220	NR_039714	100616319		NR_039714	ENSG00000265357	MIR4493	-	microRNA 4493	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr11-1008	chr11	125277798	125279365	+	27.5	1567	"intron (NM_022062, intron 7 of 12)"	"intron (NM_022062, intron 7 of 12)"	-86529	NM_001301851	403312	Hs.450611	NM_203452		LOC403312	-	putative uncharacterized protein MGC39545	protein-coding	27.52	3.4	8.094117647	1.25E-12
chr11-1013	chr11	126392369	126394453	+	42.2	2084	"intron (NM_032531, intron 3 of 16)"	"intron (NM_032531, intron 3 of 16)"	117334	NM_001254759	6484	Hs.591947	NM_006278	ENSG00000110080	ST3GAL4	CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST3GalIV|STZ	"ST3 beta-galactoside alpha-2,3-sialyltransferase 4"	protein-coding	42.25	5.82	7.259450172	7.27E-18
chr11-1021	chr11	130293389	130295599	+	33.9	2210	"intron (NM_007037, intron 1 of 8)"	"intron (NM_007037, intron 1 of 8)"	4394	NM_007037	11095	Hs.271605	NM_007037	ENSG00000134917	ADAMTS8	ADAM-TS8|METH2	ADAM metallopeptidase with thrombospondin type 1 motif 8	protein-coding	33.92	7.77	4.365508366	1.68E-09
chr11-1023	chr11	130299510	130300510	+	16.6	1000	Intergenic	Intergenic	-1122	NM_007037	11095	Hs.271605	NM_007037	ENSG00000134917	ADAMTS8	ADAM-TS8|METH2	ADAM metallopeptidase with thrombospondin type 1 motif 8	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr11-1029	chr11	133491892	133492892	+	17.9	1000	Intergenic	L2c|LINE|L2	-89885	NM_001319104	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr11-1030	chr11	133620330	133621845	+	25.6	1515	Intergenic	Intergenic	59184	NR_120444	646522	Hs.560000	NR_120444	ENSG00000255258	LOC646522	-	uncharacterized LOC646522	ncRNA	25.6	5.82	4.39862543	7.99E-08
chr11-1033	chr11	133848833	133849833	+	17.9	1000	Intergenic	L2b|LINE|L2	-22684	NM_001277285	22997	Hs.204121	NM_014987	ENSG00000080854	IGSF9B	-	immunoglobulin superfamily member 9B	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr11-1035	chr11	133888803	133889803	+	17.3	1000	Intergenic	Intergenic	-12864	NR_027276	100128239	Hs.423734	NR_027276	ENSG00000204241	LOC100128239	-	uncharacterized LOC100128239	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr11-1036	chr11	134713907	134715425	+	27.5	1518	Intergenic	Intergenic	-140580	NR_135050	100507548	Hs.639995	NR_135050		LOC100507548	-	uncharacterized LOC100507548	ncRNA	27.52	3.88	7.092783505	1.44E-11
chr11-1038	chr11	737656	738954	+	23	1298	Intergenic	MER21A|LTR|ERVL	-9127	NM_006755	6888	Hs.438678	NM_006755	ENSG00000177156	TALDO1	TAL|TAL-H|TALDOR|TALH	transaldolase 1	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr11-104	chr11	65562305	65563848	+	28.8	1543	"3' UTR (NM_004561, exon 4 of 4)"	"3' UTR (NM_004561, exon 4 of 4)"	-4737	NR_108085	101927828	Hs.666246	NR_108085	ENSG00000255120	OVOL1-AS1	-	OVOL1 antisense RNA 1	ncRNA	28.8	5.34	5.393258427	7.39E-10
chr11-1041	chr11	1844028	1846931	+	37.1	2903	Intergenic	Intergenic	-10061	NM_001290334	90019	Hs.161031	NM_138567	ENSG00000149043	SYT8	-	synaptotagmin 8	protein-coding	37.12	7.77	4.777348777	1.66E-11
chr11-1045	chr11	2029005	2049533	+	297.6	20528	Intergenic	Intergenic	-16573	NR_131224	283120	Hs.533566	NR_002196	ENSG00000130600	H19	ASM|ASM1|BWS|D11S813E|LINC00008|NCRNA00008|WT2	"H19, imprinted maternally expressed transcript (non-protein coding)"	ncRNA	297.64	47.57	6.256884591	3.71E-102
chr11-1051	chr11	2163710	2164710	+	22.4	1000	"intron (NR_133657, intron 1 of 2)"	"intron (NR_133657, intron 1 of 2)"	-1856	NM_001291862	3481	Hs.272259	NM_000612	ENSG00000167244	IGF2	C11orf43|GRDF|IGF-II|PP9974	insulin like growth factor 2	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr11-1053	chr11	2175889	2177335	+	21.8	1446	"intron (NM_001042376, intron 2 of 4)"	"intron (NM_001042376, intron 2 of 4)"	-5779	NM_001007139	3481	Hs.272259	NM_000612	ENSG00000167244	IGF2	C11orf43|GRDF|IGF-II|PP9974	insulin like growth factor 2	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr11-1056	chr11	2556242	2557772	+	22.4	1530	"intron (NM_000218, intron 2 of 15)"	"intron (NM_000218, intron 2 of 15)"	74323	NM_181798	3784	Hs.95162	NM_000218	ENSG00000053918	KCNQ1	ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS	potassium voltage-gated channel subfamily Q member 1	protein-coding	22.4	2.43	9.218106996	2.49E-11
chr11-1060	chr11	2690252	2691536	+	18.6	1284	"non-coding (NR_002728, exon 1 of 1)"	"non-coding (NR_002728, exon 1 of 1)"	30334	NR_002728	10984	Hs.604823	NR_002728	ENSG00000269821	KCNQ1OT1	KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012	KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr11-1063	chr11	2823213	2825899	+	37.8	2686	"intron (NM_000218, intron 15 of 15)"	"intron (NM_000218, intron 15 of 15)"	58243	NR_130721	338653	Hs.639425	NR_130721	ENSG00000229414	KCNQ1-AS1	-	KCNQ1 antisense RNA 1	ncRNA	37.76	3.88	9.731958763	5.72E-19
chr11-1064	chr11	2847353	2850292	+	41.6	2939	"intron (NM_000218, intron 15 of 15)"	MLT1J|LTR|ERVL-MaLR	33977	NR_130721	338653	Hs.639425	NR_130721	ENSG00000229414	KCNQ1-AS1	-	KCNQ1 antisense RNA 1	ncRNA	41.61	7.28	5.715659341	2.23E-14
chr11-1067	chr11	2874193	2875749	+	23	1556	"intron (NR_130721, intron 2 of 2)"	"intron (NR_130721, intron 2 of 2)"	7828	NR_130721	338653	Hs.639425	NR_130721	ENSG00000229414	KCNQ1-AS1	-	KCNQ1 antisense RNA 1	ncRNA	23.04	4.85	4.750515464	1.15E-07
chr11-1068	chr11	4208884	4211366	+	46.1	2482	"intron (NR_047550, intron 1 of 1)"	"intron (NR_047550, intron 1 of 1)"	1743	NR_047550	100506082	Hs.445705	NR_047550	ENSG00000254480	LOC100506082	-	uncharacterized LOC100506082	ncRNA	46.09	5.82	7.919243986	1.58E-20
chr11-1069	chr11	4227551	4228551	+	17.9	1000	Intergenic	Intergenic	19669	NR_047550	100506082	Hs.445705	NR_047550	ENSG00000254480	LOC100506082	-	uncharacterized LOC100506082	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr11-1070	chr11	6081393	6082393	+	17.3	1000	Intergenic	Intergenic	-32922	NM_001001917	120796	Hs.553543	NM_001001917	ENSG00000180934	OR56A1	OR11-75	olfactory receptor family 56 subfamily A member 1	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr11-1073	chr11	6329807	6330807	+	16.6	1000	Intergenic	AluSq2|SINE|Alu	11433	NM_145040	112464	Hs.434044	NM_145040	ENSG00000170955	PRKCDBP	CAVIN3|HSRBC|SRBC|cavin-3	protein kinase C delta binding protein	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr11-1077	chr11	8281581	8282581	+	17.3	1000	"intron (NM_001270428, intron 1 of 3)"	"intron (NM_001270428, intron 1 of 3)"	3344	NR_073006	4004	Hs.654426	NM_002315	ENSG00000166407	LMO1	RBTN1|RHOM1|TTG1	LIM domain only 1	protein-coding	17.28	0	17.80043126	3.68E-16
chr11-1081	chr11	9077721	9078721	+	17.9	1000	"intron (NM_001330199, intron 9 of 21)"	"intron (NM_001330199, intron 9 of 21)"	33705	NR_049874	100847015		NR_049874	ENSG00000264984	MIR5691	-	microRNA 5691	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr11-1086	chr11	12473538	12474538	+	16.6	1000	"intron (NM_018222, intron 1 of 12)"	"intron (NM_018222, intron 1 of 12)"	75012	NM_018222	55742	Hs.432914	NM_018222	ENSG00000197702	PARVA	CH-ILKBP|MXRA2	parvin alpha	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr11-1090	chr11	12815182	12816441	+	19.2	1259	"intron (NM_021961, intron 3 of 12)"	"intron (NM_021961, intron 3 of 12)"	119842	NM_021961	7003	Hs.655331	NM_021961	ENSG00000187079	TEAD1	AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1	TEA domain transcription factor 1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr11-1102	chr11	17540899	17541899	+	17.9	1000	"intron (NM_001297764, intron 13 of 19)"	"intron (NM_001297764, intron 13 of 19)"	24564	NM_153676	10083	Hs.502072	NM_005709	ENSG00000006611	USH1C	AIE-75|DFNB18|DFNB18A|NY-CO-37|NY-CO-38|PDZ-45|PDZ-73|PDZ-73/NY-CO-38|PDZ73|PDZD7C|ush1cpst	USH1 protein network component harmonin	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr11-1111	chr11	19810366	19811366	+	16.6	1000	"intron (NM_182964, intron 1 of 37)"	"intron (NM_182964, intron 1 of 37)"	-29237	NR_039843	100616426		NR_039843	ENSG00000264309	MIR4694	-	microRNA 4694	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr11-1114	chr11	20166754	20168009	+	19.8	1255	Intergenic	MER50|LTR|ERV1	14489	NM_001029865	120237	Hs.558604	NM_001029865	ENSG00000109851	DBX1	-	developing brain homeobox 1	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr11-1121	chr11	34301323	34302323	+	17.9	1000	"intron (NM_145804, intron 1 of 16)"	"intron (NM_145804, intron 1 of 16)"	77732	NM_145804	25841	Hs.23361	NM_145804	ENSG00000166016	ABTB2	ABTB2A|BTBD22	ankyrin repeat and BTB domain containing 2	protein-coding	17.92	0	18.4597065	9.96E-18
chr11-1122	chr11	34660376	34662234	+	32.6	1858	"intron (NM_001206616, intron 1 of 8)"	"intron (NM_001206616, intron 1 of 8)"	7294	NM_001206616	26298	Hs.653859	NM_012153	ENSG00000135373	EHF	ESE3|ESE3B|ESEJ	ETS homologous factor	protein-coding	32.64	6.8	4.8	5.32E-10
chr11-1124	chr11	35398209	35399209	+	16.6	1000	"intron (NM_001252652, intron 1 of 11)"	MIR|SINE|MIR	42396	NM_004171	6506	Hs.502338	NM_004171	ENSG00000110436	SLC1A2	EAAT2|EIEE41|GLT-1|HBGT	solute carrier family 1 member 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-1126	chr11	35516299	35517299	+	16	1000	"intron (NM_015430, intron 1 of 11)"	"intron (NM_015430, intron 1 of 11)"	30780	NM_015430	25891	Hs.55044	NM_015430	ENSG00000149090	PAMR1	DKFZP586H2123|FP938|RAMP	peptidase domain containing associated with muscle regeneration 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr11-1127	chr11	35560203	35561203	+	16.6	1000	Intergenic	Intergenic	-8855	NM_001282675	25891	Hs.55044	NM_015430	ENSG00000149090	PAMR1	DKFZP586H2123|FP938|RAMP	peptidase domain containing associated with muscle regeneration 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-1128	chr11	36246848	36247848	+	16.6	1000	"intron (NM_001304264, intron 4 of 5)"	AluSz|SINE|Alu	63651	NM_001101653	29099	Hs.279836	NM_014186	ENSG00000110442	COMMD9	HSPC166	COMM domain containing 9	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr11-1130	chr11	43596978	43597978	+	16	1000	Intergenic	Intergenic	-5466	NR_029697	406918		NR_029697	ENSG00000199077	MIR129-2	MIR-129b|MIRN129-2|mir-129-2	microRNA 129-2	ncRNA	16	3.88	4.12371134	7.91E-05
chr11-1132	chr11	44053652	44054911	+	18.6	1259	Intergenic	Intergenic	-15250	NM_001031854	390110	Hs.558851	NM_001031854	ENSG00000205126	ACCSL	-	1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr11-1136	chr11	45414523	45418137	+	51.2	3614	Intergenic	LTR33|LTR|ERVL	23382	NR_122071	399886	Hs.559970	NR_122071	ENSG00000255267	LOC399886	-	uncharacterized LOC399886	ncRNA	51.21	7.77	6.590733591	6.93E-20
chr11-1138	chr11	45734029	45735029	+	16	1000	Intergenic	Intergenic	-9329	NR_047569	100507384	Hs.259426	NR_047569	ENSG00000254519	LOC100507384	-	uncharacterized LOC100507384	ncRNA	16	3.4	4.705882353	2.25E-05
chr11-114	chr11	127333847	127335115	+	26.2	1268	Intergenic	Intergenic	193516	NR_120580	101929497	Hs.737442	NR_120580	ENSG00000273409	LOC101929497	-	uncharacterized LOC101929497	ncRNA	26.24	3.88	6.762886598	1.00E-10
chr11-1140	chr11	46258892	46260761	+	31.4	1869	Intergenic	CpG	-39363	NM_052854	90993	Hs.405961	NM_052854	ENSG00000157613	CREB3L1	OASIS	cAMP responsive element binding protein 3 like 1	protein-coding	31.36	4.85	6.465979381	3.34E-12
chr11-1142	chr11	46313044	46314718	+	26.2	1674	"intron (NM_052854, intron 1 of 11)"	"intron (NM_052854, intron 1 of 11)"	14692	NM_052854	90993	Hs.405961	NM_052854	ENSG00000157613	CREB3L1	OASIS	cAMP responsive element binding protein 3 like 1	protein-coding	26.24	4.85	5.410309278	4.26E-09
chr11-1144	chr11	46410399	46414164	+	67.8	3765	Intergenic	CpG	-4123	NM_000741	1132	Hs.248100	NM_000741	ENSG00000180720	CHRM4	HM4|M4R	cholinergic receptor muscarinic 4	protein-coding	67.85	8.74	7.763157895	4.68E-29
chr11-1146	chr11	48081816	48085134	+	46.1	3318	"intron (NM_002843, intron 1 of 24)"	AluJr|SINE|Alu	-34859	NR_036119	100423000		NR_036119	ENSG00000263693	MIR3161	-	microRNA 3161	ncRNA	46.09	6.8	6.777941176	1.95E-18
chr11-115	chr11	10632054	10633054	+	23.7	1000	"intron (NM_001100163, intron 10 of 20)"	"intron (NM_001100163, intron 10 of 20)"	41294	NM_001098579	10335	Hs.501898	NM_130385	ENSG00000072952	MRVI1	IRAG|JAW1L	murine retrovirus integration site 1 homolog	protein-coding	23.68	1.46	16.21917808	5.41E-16
chr11-1150	chr11	59204038	59205038	+	17.9	1000	Intergenic	L1MC1|LINE|L1	-6104	NM_001004728	219982	Hs.553649	NM_001004728	ENSG00000172320	OR5A1	OR11-249|OR5A1P|OST181	olfactory receptor family 5 subfamily A member 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr11-1153	chr11	61315225	61316225	+	16	1000	"intron (NM_001300773, intron 3 of 9)"	"intron (NM_001300773, intron 3 of 9)"	32619	NM_004200	9066	Hs.131188	NM_004200	ENSG00000011347	SYT7	IPCA-7|IPCA7|PCANAP7|SYT-VII|SYTVII	synaptotagmin 7	protein-coding	16	1.94	8.24742268	7.67E-08
chr11-1154	chr11	61673611	61674611	+	17.3	1000	"exon (NM_013401, exon 5 of 10)"	"exon (NM_013401, exon 5 of 10)"	10970	NM_013401	5866	Hs.13759	NM_013401	ENSG00000167994	RAB3IL1	GRAB	RAB3A interacting protein like 1	protein-coding	17.28	1.46	11.83561644	2.99E-10
chr11-1155	chr11	61835909	61837360	+	20.5	1451	Intergenic	AluSg|SINE|Alu	-54811	NM_001040694	3619	Hs.142179	NM_020238	ENSG00000149503	INCENP	-	inner centromere protein	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr11-1158	chr11	63256372	63257372	+	17.9	1000	"intron (NM_001146729, intron 2 of 5)"	"intron (NM_001146729, intron 2 of 5)"	1808	NM_054108	117245	Hs.410316	NM_054108	ENSG00000168004	HRASLS5	HRLP5|HRSL5|RLP1|iNAT	HRAS like suppressor family member 5	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr11-1159	chr11	64409398	64410687	+	20.5	1289	"exon (NM_138734, exon 1 of 7)"	"exon (NM_138734, exon 1 of 7)"	745	NM_138734	9379	Hs.372938	NM_015080	ENSG00000110076	NRXN2	-	neurexin 2	protein-coding	20.48	0	21.09680742	5.97E-21
chr11-1163	chr11	66492015	66497216	+	105	5201	Intergenic	Intergenic	-5745	NM_006946	6712	Hs.26915	NM_006946	ENSG00000173898	SPTBN2	GTRAP41|SCA5|SCAR14	"spectrin beta, non-erythrocytic 2"	protein-coding	104.97	19.42	5.405252317	4.53E-33
chr11-1164	chr11	66673717	66677520	+	56.3	3803	promoter-TSS (NM_022172)	promoter-TSS (NM_022172)	-278	NM_022172	5091	Hs.89890	NM_000920	ENSG00000173599	PC	PCB	pyruvate carboxylase	protein-coding	56.33	6.8	8.283823529	1.67E-25
chr11-1165	chr11	66793041	66794041	+	17.9	1000	"intron (NM_001318775, intron 1 of 6)"	AluYg6|SINE|Alu	2725	NM_001318775	91683	Hs.287636	NM_177963	ENSG00000173227	SYT12	SYT11|sytXII	synaptotagmin 12	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr11-1170	chr11	68070383	68072499	+	35.2	2116	Intergenic	MSTA-int|LTR|ERVL-MaLR	-8636	NM_001291902	4041	Hs.6347	NM_002335	ENSG00000162337	LRP5	BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP7|OPPG|OPS|OPTA1|VBCH2	LDL receptor related protein 5	protein-coding	35.2	6.31	5.57844691	4.08E-12
chr11-1174	chr11	69419856	69423558	+	49.3	3702	Intergenic	AluJb|SINE|Alu	-34166	NM_053056	595	Hs.523852	NM_053056	ENSG00000110092	CCND1	BCL1|D11S287E|PRAD1|U21B31	cyclin D1	protein-coding	49.29	6.8	7.248529412	3.87E-20
chr11-118	chr11	43964753	43966863	+	41	2110	TTS (NM_001145033)	TTS (NM_001145033)	1702	NM_001145033	387763	Hs.530443	NM_001145033	ENSG00000187479	C11orf96	AG2	chromosome 11 open reading frame 96	protein-coding	40.97	7.28	5.627747253	2.23E-14
chr11-1181	chr11	69688828	69690312	+	26.9	1484	Intergenic	MIR|SINE|MIR	-55378	NM_005247	2248	Hs.37092	NM_005247	ENSG00000186895	FGF3	HBGF-3|INT2	fibroblast growth factor 3	protein-coding	26.88	1.94	13.8556701	2.90E-17
chr11-1186	chr11	70004344	70006168	+	32	1824	"intron (NM_018043, intron 16 of 25)"	MLT1J|LTR|ERVL-MaLR	-44013	NM_003824	8772	Hs.86131	NM_003824	ENSG00000168040	FADD	GIG3|MORT1	Fas associated via death domain	protein-coding	32	5.34	5.992509363	3.79E-12
chr11-1187	chr11	70010197	70011197	+	17.3	1000	"intron (NM_018043, intron 19 of 25)"	"intron (NM_018043, intron 19 of 25)"	-38572	NM_003824	8772	Hs.86131	NM_003824	ENSG00000168040	FADD	GIG3|MORT1	Fas associated via death domain	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr11-1189	chr11	70350316	70351863	+	28.2	1547	"intron (NM_012309, intron 14 of 22)"	"intron (NM_012309, intron 14 of 22)"	106477	NM_138565	2017	Hs.596164	NM_005231	ENSG00000085733	CTTN	EMS1	cortactin	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr11-1193	chr11	70588482	70589482	+	16.6	1000	"intron (NM_012309, intron 11 of 22)"	"intron (NM_012309, intron 11 of 22)"	-81037	NR_110766	22941	Hs.268726	NM_012309	ENSG00000162105	SHANK2	AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3	SH3 and multiple ankyrin repeat domains 2	protein-coding	16.64	0.49	33.95918367	3.68E-16
chr11-1197	chr11	72299354	72302228	+	39.7	2874	"intron (NM_002599, intron 11 of 30)"	"intron (NM_002599, intron 11 of 30)"	19091	NR_126364	101928555	Hs.376950	NR_126364	ENSG00000227467	LINC01537	-	long intergenic non-protein coding RNA 1537	ncRNA	39.69	5.82	6.819587629	3.74E-16
chr11-1199	chr11	73019453	73020453	+	17.3	1000	"exon (NM_014786, exon 1 of 21)"	"exon (NM_014786, exon 1 of 21)"	290	NM_014786	9828	Hs.533719	NM_014786	ENSG00000110237	ARHGEF17	P164RHOGEF|RHOGEF17|TEM4|p164-RhoGEF	Rho guanine nucleotide exchange factor 17	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr11-1202	chr11	76332366	76333366	+	17.9	1000	Intergenic	MIRc|SINE|MIR	48178	NM_005512	2615	Hs.151641	NM_005512	ENSG00000137507	LRRC32	D11S833E|GARP	leucine rich repeat containing 32	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr11-1212	chr11	86346255	86347255	+	17.3	1000	"intron (NM_001014811, intron 1 of 13)"	MSTD|LTR|ERVL-MaLR	36485	NM_001014811	10873	Hs.199743	NM_006680	ENSG00000151376	ME3	NADP-ME	malic enzyme 3	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr11-1213	chr11	86510512	86511771	+	20.5	1259	promoter-TSS (NR_120592)	promoter-TSS (NR_120592)	-141	NR_120593	11098	Hs.25338	NM_007173	ENSG00000150687	PRSS23	SIG13|SPUVE|ZSIG13	"protease, serine 23"	protein-coding	20.48	0	21.09680742	5.97E-21
chr11-1215	chr11	94248846	94252546	+	55.7	3700	"intron (NM_001190462, intron 1 of 3)"	"intron (NM_001190462, intron 1 of 3)"	5001	NM_001190462	643037	Hs.97691	NM_001190462	ENSG00000257057	C11orf97	LINC01171	chromosome 11 open reading frame 97	protein-coding	55.69	7.77	7.167310167	2.06E-22
chr11-1216	chr11	94407807	94408807	+	17.3	1000	"intron (NR_135096, intron 4 of 6)"	L2c|LINE|L2	65214	NR_135093	105369438	Hs.568921	NR_135093	ENSG00000255929	LOC105369438	-	uncharacterized LOC105369438	ncRNA	17.28	0.97	17.81443299	2.06E-12
chr11-1224	chr11	112451325	112452325	+	17.9	1000	Intergenic	Intergenic	-25300	NR_104155	387810	Hs.512255	NR_104155	ENSG00000255484	LOC387810	-	uncharacterized LOC387810	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr11-1225	chr11	112831144	112833131	+	31.4	1987	"non-coding (NR_120563, exon 2 of 3)"	"non-coding (NR_120563, exon 2 of 3)"	168	NM_001242607	4684	Hs.503878	NM_000615	ENSG00000149294	NCAM1	CD56|MSK39|NCAM	neural cell adhesion molecule 1	protein-coding	31.36	3.88	8.082474227	3.25E-14
chr11-1229	chr11	114072408	114073408	+	17.3	1000	"intron (NM_001018011, intron 4 of 6)"	"intron (NM_001018011, intron 4 of 6)"	-93627	NM_006169	4837	Hs.503911	NM_006169	ENSG00000166741	NNMT	-	nicotinamide N-methyltransferase	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr11-1239	chr11	117545835	117552633	+	101.1	6798	"intron (NM_020693, intron 3 of 32)"	L2a|LINE|L2	118742	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	101.13	19.42	5.207518023	6.95E-31
chr11-1243	chr11	117703031	117705822	+	42.2	2791	"intron (NM_001204268, intron 6 of 10)"	"intron (NM_001204268, intron 6 of 10)"	-5619	NM_021603	486	Hs.731865	NM_001680	ENSG00000137731	FXYD2	ATP1G1|HOMG2	FXYD domain containing ion transport regulator 2	protein-coding	42.25	5.82	7.259450172	7.27E-18
chr11-1254	chr11	118831965	118832965	+	16.6	1000	Intergenic	MER52C|LTR|ERV1	5457	NM_006760	7379	Hs.379613	NM_006760	ENSG00000110375	UPK2	UP2|UPII	uroplakin 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr11-1255	chr11	119020091	119021625	+	26.2	1534	"exon (NM_001142505, exon 2 of 15)"	"exon (NM_001142505, exon 2 of 15)"	559	NM_001142505	64137	Hs.126378	NM_022169	ENSG00000172350	ABCG4	WHITE2	ATP binding cassette subfamily G member 4	protein-coding	26.24	0.97	27.05154639	7.61E-22
chr11-1258	chr11	119291853	119293835	+	32	1982	"5' UTR (NM_001311160, exon 1 of 4)"	"5' UTR (NM_001311160, exon 1 of 4)"	428	NM_001311160	7070	Hs.644697	NM_006288	ENSG00000154096	THY1	CD90|CDw90	Thy-1 cell surface antigen	protein-coding	32	3.88	8.24742268	3.92E-15
chr11-1260	chr11	119467002	119468002	+	16	1000	Intergenic	HAL1|LINE|L1	131933	NM_203286	5818	Hs.334846	NM_002855	ENSG00000110400	NECTIN1	CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1	nectin cell adhesion molecule 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr11-1266	chr11	119968956	119969956	+	17.3	1000	Intergenic	Intergenic	30165	NM_001330382	23650	Hs.504115	NM_012101	ENSG00000137699	TRIM29	ATDC	tripartite motif containing 29	protein-coding	17.28	1.46	11.83561644	2.99E-10
chr11-1267	chr11	120054625	120060853	+	77.4	6228	Intergenic	Intergenic	-24008	NM_178507	220323	Hs.445081	NM_178507	ENSG00000184232	OAF	NS5ATP13TP2	out at first homolog	protein-coding	77.45	15.53	4.9871217	8.80E-23
chr11-1270	chr11	120459868	120462108	+	33.3	2240	"intron (NM_001282470, intron 1 of 19)"	"intron (NM_001282470, intron 1 of 19)"	25843	NM_001282473	2900	Hs.538738	NM_014619	ENSG00000149403	GRIK4	EAA1|GRIK|GluK4|KA1	glutamate ionotropic receptor kainate type subunit 4	protein-coding	33.28	1.94	17.15463918	2.91E-23
chr11-1274	chr11	121100855	121101855	+	16.6	1000	Intergenic	Intergenic	-62033	NM_006918	6309	Hs.287749	NM_006918	ENSG00000109929	SC5D	ERG3|S5DES|SC5DL	sterol-C5-desaturase	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-1275	chr11	121217813	121218813	+	17.3	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	54736	NM_001024956	6309	Hs.287749	NM_006918	ENSG00000109929	SC5D	ERG3|S5DES|SC5DL	sterol-C5-desaturase	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr11-1276	chr11	122018997	122019997	+	17.3	1000	"intron (NR_137184, intron 1 of 1)"	"intron (NR_137184, intron 1 of 1)"	-2196	NR_029477	406882		NR_029477	ENSG00000198975	MIRLET7A2	LET7A2|MIRNLET7A2|let-7a-2	microRNA let-7a-2	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr11-1282	chr11	122766394	122767394	+	15.4	1000	"intron (NM_024806, intron 2 of 8)"	"intron (NM_024806, intron 2 of 8)"	13658	NM_199124	79864	Hs.164705	NM_024806	ENSG00000109944	C11orf63	-	chromosome 11 open reading frame 63	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-1284	chr11	123053825	123055883	+	32	2058	"intron (NM_024769, intron 1 of 6)"	AluSx|SINE|Alu	11159	NM_024769	79827	Hs.591949	NM_024769	ENSG00000166250	CLMP	ACAM|ASAM|CSBM|CSBS	CXADR like membrane protein	protein-coding	32	5.34	5.992509363	3.79E-12
chr11-1285	chr11	123064611	123071989	+	93.5	7378	Intergenic	Intergenic	-2287	NM_024769	79827	Hs.591949	NM_024769	ENSG00000166250	CLMP	ACAM|ASAM|CSBM|CSBS	CXADR like membrane protein	protein-coding	93.45	22.33	4.184952978	3.36E-23
chr11-1287	chr11	123430075	123431075	+	17.9	1000	promoter-TSS (NM_001286564)	promoter-TSS (NM_001286564)	-395	NM_001286564	57476	Hs.144725	NM_020716	ENSG00000023171	GRAMD1B	-	GRAM domain containing 1B	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr11-1291	chr11	124447583	124448583	+	17.3	1000	Intergenic	Intergenic	8118	NM_001005194	390275	Hs.632104	NM_001005194	ENSG00000196119	OR8A1	OR11-318|OST025	olfactory receptor family 8 subfamily A member 1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr11-1297	chr11	124686345	124687345	+	16.6	1000	"intron (NR_103862, intron 4 of 4)"	MER83C|LTR|ERV1	16521	NR_103862	100507283	Hs.564177	NR_103862	ENSG00000245498	LOC100507283	-	uncharacterized LOC100507283	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr11-1300	chr11	124806642	124807642	+	16.6	1000	promoter-TSS (NM_152722)	promoter-TSS (NM_152722)	-834	NM_152722	220296	Hs.745294	NM_152722	ENSG00000165478	HEPACAM	GlialCAM|MLC2A|MLC2B	hepatic and glial cell adhesion molecule	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr11-1301	chr11	125143208	125144728	+	26.2	1520	"intron (NM_022062, intron 2 of 12)"	MIR|SINE|MIR	109409	NM_022062	63876	Hs.278564	NM_022062	ENSG00000165495	PKNOX2	PREP2	PBX/knotted 1 homeobox 2	protein-coding	26.24	5.82	4.508591065	7.99E-08
chr11-1303	chr11	126464267	126468650	+	69.8	4383	"intron (NM_032531, intron 1 of 16)"	"intron (NM_032531, intron 1 of 16)"	-56215	NR_120532	101929427	Hs.600341	NR_120532	ENSG00000254607	LOC101929427	-	uncharacterized LOC101929427	ncRNA	69.77	12.13	5.751854905	2.22E-23
chr11-1305	chr11	126483908	126484908	+	17.3	1000	"intron (NM_032531, intron 1 of 16)"	MER5B|DNA|hAT-Charlie	-38265	NR_120532	101929427	Hs.600341	NR_120532	ENSG00000254607	LOC101929427	-	uncharacterized LOC101929427	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr11-1312	chr11	126833959	126835412	+	21.1	1453	"intron (NM_032531, intron 1 of 16)"	MER134|DNA?|DNA?	23753	NR_036126	100422918		NR_036126	ENSG00000266215	MIR3167	-	microRNA 3167	ncRNA	21.12	2.43	8.691358025	2.25E-10
chr11-1316	chr11	128556106	128558077	+	31.4	1971	promoter-TSS (NR_135072)	promoter-TSS (NR_135072)	-274	NR_135072	101929538	Hs.557829	NR_135072	ENSG00000245008	LOC101929538	-	uncharacterized LOC101929538	ncRNA	31.36	3.88	8.082474227	3.25E-14
chr11-1321	chr11	133110470	133111984	+	26.2	1514	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	291280	NM_001012393	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	26.24	0.97	27.05154639	7.61E-22
chr11-1325	chr11	133687548	133689979	+	37.8	2431	Intergenic	Intergenic	-8492	NR_120444	646522	Hs.560000	NR_120444	ENSG00000255258	LOC646522	-	uncharacterized LOC646522	ncRNA	37.76	7.77	4.85971686	1.66E-11
chr11-1327	chr11	133832496	133833496	+	17.3	1000	Intergenic	Intergenic	-6347	NM_001277285	22997	Hs.204121	NM_014987	ENSG00000080854	IGSF9B	-	immunoglobulin superfamily member 9B	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr11-1329	chr11	134249559	134250559	+	17.9	1000	"3' UTR (NM_054025, exon 6 of 6)"	"3' UTR (NM_054025, exon 6 of 6)"	31753	NM_054025	27087	Hs.381050	NM_018644	ENSG00000109956	B3GAT1	CD57|GLCATP|GLCUATP|HNK1|LEU7|NK-1|NK1	"beta-1,3-glucuronyltransferase 1"	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr11-1330	chr11	134329314	134330963	+	23.7	1649	"intron (NR_033852, intron 1 of 5)"	"intron (NR_033852, intron 1 of 5)"	23762	NR_033852	283177	Hs.504390	NR_033852		LOC283177	-	uncharacterized LOC283177	ncRNA	23.68	3.88	6.103092784	4.22E-09
chr11-1333	chr11	134449762	134450762	+	17.9	1000	Intergenic	Intergenic	143886	NR_033852	283177	Hs.504390	NR_033852		LOC283177	-	uncharacterized LOC283177	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr11-1338	chr11	555421	558307	+	51.8	2886	"exon (NM_173573, exon 8 of 14)"	"exon (NM_173573, exon 8 of 14)"	3915	NM_173573	256329	Hs.669395	NM_173573	ENSG00000185522	LMNTD2	C11orf35	lamin tail domain containing 2	protein-coding	51.85	8.25	6.284848485	5.42E-19
chr11-1341	chr11	1037138	1038138	+	17.3	1000	promoter-TSS (NM_005961)	promoter-TSS (NM_005961)	-932	NM_005961	4588	Hs.528432	NM_005961	ENSG00000184956	MUC6	MUC-6	"mucin 6, oligomeric mucus/gel-forming"	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr11-1342	chr11	1146874	1148393	+	25	1519	Intergenic	Intergenic	-3947	NM_001304359	4586	Hs.534332	NM_017511	ENSG00000215182	MUC5AC	MUC5|TBM|leB|mucin	"mucin 5AC, oligomeric mucus/gel-forming"	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr11-1347	chr11	1891850	1893483	+	25	1633	"intron (NM_001013254, intron 1 of 10)"	"intron (NM_001013254, intron 1 of 10)"	512	NM_001013255	4046	Hs.56729	NM_002339	ENSG00000130592	LSP1	WP34|pp52	lymphocyte-specific protein 1	protein-coding	24.96	1.94	12.86597938	5.33E-15
chr11-135	chr11	125157931	125159803	+	36.5	1872	"intron (NM_022062, intron 2 of 12)"	"intron (NM_022062, intron 2 of 12)"	124308	NM_022062	63876	Hs.278564	NM_022062	ENSG00000165495	PKNOX2	PREP2	PBX/knotted 1 homeobox 2	protein-coding	36.48	7.77	4.694980695	8.02E-11
chr11-1352	chr11	2138305	2139571	+	20.5	1266	Intergenic	L1MEf|LINE|L1	16501	NR_030158	619552		NR_030158	ENSG00000207805	MIR483	MIRN483|hsa-mir-483|mir-483	microRNA 483	ncRNA	20.48	1.94	10.55670103	9.02E-12
chr11-1353	chr11	2142539	2143539	+	16	1000	Intergenic	Intergenic	12400	NR_030158	619552		NR_030158	ENSG00000207805	MIR483	MIRN483|hsa-mir-483|mir-483	microRNA 483	ncRNA	16	3.4	4.705882353	2.25E-05
chr11-1355	chr11	2166510	2171491	+	73.6	4981	"non-coding (NR_003512, exon 4 of 7)"	"non-coding (NR_003512, exon 4 of 7)"	1833	NM_001007139	3481	Hs.272259	NM_000612	ENSG00000167244	IGF2	C11orf43|GRDF|IGF-II|PP9974	insulin like growth factor 2	protein-coding	73.61	9.71	7.58084449	2.05E-30
chr11-1359	chr11	2532421	2533707	+	22.4	1286	"intron (NM_181798, intron 1 of 15)"	"intron (NM_181798, intron 1 of 15)"	50380	NM_181798	3784	Hs.95162	NM_000218	ENSG00000053918	KCNQ1	ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS	potassium voltage-gated channel subfamily Q member 1	protein-coding	22.4	0.97	23.09278351	1.19E-17
chr11-1363	chr11	2739796	2741070	+	17.3	1274	"intron (NM_000218, intron 11 of 15)"	MIRb|SINE|MIR	-19205	NR_002728	10984	Hs.604823	NR_002728	ENSG00000269821	KCNQ1OT1	KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012	KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)	ncRNA	17.28	0.97	17.81443299	2.06E-12
chr11-1364	chr11	2755122	2756122	+	17.3	1000	"intron (NM_000218, intron 11 of 15)"	"intron (NM_000218, intron 11 of 15)"	-34394	NR_002728	10984	Hs.604823	NR_002728	ENSG00000269821	KCNQ1OT1	KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012	KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr11-1366	chr11	2785850	2787507	+	24.3	1657	"intron (NM_000218, intron 11 of 15)"	L1MEg|LINE|L1	-65450	NR_002728	10984	Hs.604823	NR_002728	ENSG00000269821	KCNQ1OT1	KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012	KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)	ncRNA	24.32	3.88	6.268041237	6.68E-10
chr11-1367	chr11	2809312	2810917	+	30.1	1605	"intron (NM_000218, intron 15 of 15)"	"intron (NM_000218, intron 15 of 15)"	72685	NR_130721	338653	Hs.639425	NR_130721	ENSG00000229414	KCNQ1-AS1	-	KCNQ1 antisense RNA 1	ncRNA	30.08	2.91	10.33676976	7.13E-16
chr11-1370	chr11	3095634	3096955	+	19.8	1321	Intergenic	Intergenic	-17613	NM_139273	833	Hs.274873	NM_001751	ENSG00000110619	CARS	CARS1|CYSRS|MGC:11246	cysteinyl-tRNA synthetase	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr11-1371	chr11	3403898	3404898	+	16	1000	"intron (NR_024248, intron 1 of 10)"	MIR|SINE|MIR	2207	NR_024248	650368	Hs.640450	NR_024248	ENSG00000223756	TSSC2	-	tumor suppressing subtransferable candidate 2 pseudogene	pseudo	16	2.91	5.498281787	4.98E-06
chr11-1373	chr11	4524335	4525335	+	14.7	1000	Intergenic	Intergenic	14726	NM_001005171	390036	Hs.553726	NM_001005171	ENSG00000196778	OR52K1	OR11-8	olfactory receptor family 52 subfamily K member 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-1381	chr11	8376236	8377236	+	16.6	1000	Intergenic	Intergenic	-86554	NM_001270428	4004	Hs.654426	NM_002315	ENSG00000166407	LMO1	RBTN1|RHOM1|TTG1	LIM domain only 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-1383	chr11	8857226	8860033	+	47.4	2807	"intron (NM_005418, intron 3 of 22)"	"intron (NM_005418, intron 3 of 22)"	-25747	NM_139157	6764	Hs.117715	NM_005418	ENSG00000166444	ST5	DENND2B|HTS1|p126	suppression of tumorigenicity 5	protein-coding	47.37	5.82	8.139175258	1.93E-21
chr11-1385	chr11	9103242	9105029	+	32.6	1787	"intron (NM_001330199, intron 2 of 21)"	L1MB7|LINE|L1	7791	NR_049874	100847015		NR_049874	ENSG00000264984	MIR5691	-	microRNA 5691	ncRNA	32.64	7.28	4.483516484	2.08E-09
chr11-1386	chr11	9251941	9252941	+	16.6	1000	"intron (NM_001243254, intron 1 of 22)"	AluJb|SINE|Alu	34432	NM_001243254	23258	Hs.501857	NM_015213	ENSG00000184014	DENND5A	RAB6IP1	DENN domain containing 5A	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr11-1391	chr11	10408756	10409756	+	16	1000	"intron (NR_103765, intron 2 of 3)"	"intron (NR_103765, intron 2 of 3)"	-62612	NM_001172431	272	Hs.501890	NM_000480	ENSG00000133805	AMPD3	-	adenosine monophosphate deaminase 3	protein-coding	16	0	16.4818808	1.26E-14
chr11-1394	chr11	10949506	10953831	+	69.8	4325	Intergenic	AluSz|SINE|Alu	71904	NR_034137	729013	Hs.726427	NR_034137	ENSG00000247271	ZBED5-AS1	-	ZBED5 antisense RNA 1	ncRNA	69.77	9.71	7.185375901	8.31E-28
chr11-1397	chr11	11435853	11436853	+	16.6	1000	"intron (NM_198516, intron 3 of 10)"	MLT1E3|LTR|ERVL-MaLR	-61449	NM_001256686	283106	Hs.654675	NM_001256686	ENSG00000254598	CSNK2A3	CSNK2A1P	casein kinase 2 alpha 3	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-1400	chr11	12004559	12005559	+	16	1000	"intron (NM_001018057, intron 3 of 6)"	"intron (NM_001018057, intron 3 of 6)"	25127	NM_001018057	27122	Hs.292156	NM_013253	ENSG00000050165	DKK3	REIC|RIG	dickkopf WNT signaling pathway inhibitor 3	protein-coding	16	1.94	8.24742268	7.67E-08
chr11-1404	chr11	12732591	12734968	+	44.2	2377	"intron (NM_021961, intron 2 of 12)"	"intron (NM_021961, intron 2 of 12)"	37810	NM_021961	7003	Hs.655331	NM_021961	ENSG00000187079	TEAD1	AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1	TEA domain transcription factor 1	protein-coding	44.17	6.8	6.495588235	8.79E-17
chr11-1406	chr11	12799316	12800316	+	16.6	1000	"intron (NM_021961, intron 3 of 12)"	"intron (NM_021961, intron 3 of 12)"	103847	NM_021961	7003	Hs.655331	NM_021961	ENSG00000187079	TEAD1	AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1	TEA domain transcription factor 1	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr11-1407	chr11	12896582	12897582	+	16	1000	"intron (NM_021961, intron 5 of 12)"	"intron (NM_021961, intron 5 of 12)"	114013	NR_038904	100506305	Hs.153408	NR_038904	ENSG00000251381	LINC00958	-	long intergenic non-protein coding RNA 958	ncRNA	16	3.88	4.12371134	7.91E-05
chr11-1408	chr11	12993401	12994401	+	16	1000	Intergenic	MLT1J1-int|LTR|ERVL-MaLR	17194	NR_038904	100506305	Hs.153408	NR_038904	ENSG00000251381	LINC00958	-	long intergenic non-protein coding RNA 958	ncRNA	16	1.94	8.24742268	7.67E-08
chr11-141	chr11	134497988	134498988	+	23.7	1000	Intergenic	Intergenic	192112	NR_033852	283177	Hs.504390	NR_033852		LOC283177	-	uncharacterized LOC283177	ncRNA	23.68	4.85	4.882474227	1.15E-07
chr11-1412	chr11	13655523	13656523	+	14.7	1000	Intergenic	Intergenic	-34183	NM_032228	84188	Hs.501991	NM_032228	ENSG00000197601	FAR1	MLSTD2|PFCRD|SDR10E1	fatty acyl-CoA reductase 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-1413	chr11	13985094	13986717	+	21.8	1623	"intron (NM_006108, intron 1 of 16)"	CpG	1721	NM_006108	10418	Hs.643864	NM_006108	ENSG00000262655	SPON1	VSGP/F-spondin|f-spondin	spondin 1	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr11-1414	chr11	14029344	14030344	+	15.4	1000	"intron (NM_006108, intron 2 of 16)"	MER2|DNA|TcMar-Tigger	45660	NM_006108	10418	Hs.643864	NM_006108	ENSG00000262655	SPON1	VSGP/F-spondin|f-spondin	spondin 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-1419	chr11	17614529	17615923	+	28.2	1394	"exon (NM_001277269, exon 26 of 55)"	"exon (NM_001277269, exon 26 of 55)"	46306	NM_001292063	340990	Hs.688380	NM_198497	ENSG00000188162	OTOG	DFNB18B|MLEMP|OTGN	otogelin	protein-coding	28.16	2.43	11.58847737	1.88E-16
chr11-1422	chr11	19562497	19563497	+	16.6	1000	"intron (NM_001111018, intron 1 of 37)"	"intron (NM_001111018, intron 1 of 37)"	-17372	NR_033989	399876	Hs.132600	NR_033989	ENSG00000254622	NAV2-AS4	-	NAV2 antisense RNA 4	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr11-1425	chr11	20298837	20300155	+	19.2	1318	Intergenic	MIRb|SINE|MIR	-85735	NM_006410	10553	Hs.90753	NM_006410	ENSG00000109854	HTATIP2	CC3|SDR44U1|TIP30	HIV-1 Tat interactive protein 2	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr11-1427	chr11	27492582	27493875	+	16.6	1293	promoter-TSS (NR_131170)	promoter-TSS (NR_131170)	-50	NR_131169	105376671	Hs.568999	NR_131169	ENSG00000254862	LOC105376671	lnc-BBOX1-1	uncharacterized LOC105376671	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr11-1433	chr11	33499754	33500754	+	16.6	1000	Intergenic	MIR|SINE|MIR	-63623	NM_012194	25758	Hs.502266	NM_012194	ENSG00000110427	KIAA1549L	C11orf41|C11orf69|G2	KIAA1549 like	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr11-1435	chr11	34271578	34272578	+	17.3	1000	"intron (NM_145804, intron 1 of 16)"	"intron (NM_145804, intron 1 of 16)"	107477	NM_145804	25841	Hs.23361	NM_145804	ENSG00000166016	ABTB2	ABTB2A|BTBD22	ankyrin repeat and BTB domain containing 2	protein-coding	17.28	1.46	11.83561644	2.99E-10
chr11-1436	chr11	34274672	34275672	+	16.6	1000	"intron (NM_145804, intron 1 of 16)"	AluSg|SINE|Alu	104383	NM_145804	25841	Hs.23361	NM_145804	ENSG00000166016	ABTB2	ABTB2A|BTBD22	ankyrin repeat and BTB domain containing 2	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr11-1437	chr11	34333141	34334141	+	16	1000	"intron (NM_145804, intron 1 of 16)"	AluSx|SINE|Alu	45914	NM_145804	25841	Hs.23361	NM_145804	ENSG00000166016	ABTB2	ABTB2A|BTBD22	ankyrin repeat and BTB domain containing 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr11-1438	chr11	34516531	34519506	+	41.6	2975	"intron (NM_198381, intron 2 of 6)"	"intron (NM_198381, intron 2 of 6)"	15328	NM_001243081	2001	Hs.11713	NM_001422	ENSG00000135374	ELF5	ESE2	E74 like ETS transcription factor 5	protein-coding	41.61	8.25	5.043636364	5.90E-13
chr11-1443	chr11	34686024	34687024	+	15.4	1000	Intergenic	MER3|DNA|hAT-Charlie	32513	NM_001206616	26298	Hs.653859	NM_012153	ENSG00000135373	EHF	ESE3|ESE3B|ESEJ	ETS homologous factor	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-1444	chr11	35288619	35289619	+	16.6	1000	"intron (NM_001252652, intron 10 of 11)"	"intron (NM_001252652, intron 10 of 11)"	128702	NM_001202556	960	Hs.502328	NM_000610	ENSG00000026508	CD44	CDW44|CSPG8|ECMR-III|HCELL|HUTCH-I|IN|LHR|MC56|MDU2|MDU3|MIC4|Pgp1	CD44 molecule (Indian blood group)	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr11-1445	chr11	35291956	35293459	+	19.8	1503	"intron (NM_001252652, intron 10 of 11)"	L2a|LINE|L2	132290	NM_001202556	960	Hs.502328	NM_000610	ENSG00000026508	CD44	CDW44|CSPG8|ECMR-III|HCELL|HUTCH-I|IN|LHR|MC56|MDU2|MDU3|MIC4|Pgp1	CD44 molecule (Indian blood group)	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr11-1448	chr11	35533277	35534277	+	16.6	1000	"intron (NM_015430, intron 1 of 11)"	"intron (NM_015430, intron 1 of 11)"	13802	NM_015430	25891	Hs.55044	NM_015430	ENSG00000149090	PAMR1	DKFZP586H2123|FP938|RAMP	peptidase domain containing associated with muscle regeneration 1	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr11-1450	chr11	36061097	36062097	+	16.6	1000	"intron (NM_174902, intron 2 of 5)"	"intron (NM_174902, intron 2 of 5)"	29949	NR_039769	100616311		NR_039769	ENSG00000263389	MIR3973	-	microRNA 3973	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr11-1451	chr11	36117456	36120573	+	46.7	3117	"intron (NM_174902, intron 3 of 5)"	"intron (NM_174902, intron 3 of 5)"	-19563	NR_135064	101928510	Hs.675857	NR_135064		LOC101928510	-	uncharacterized LOC101928510	ncRNA	46.73	7.77	6.014157014	1.14E-16
chr11-1452	chr11	36150615	36151615	+	16	1000	"intron (NM_174902, intron 4 of 5)"	"intron (NM_174902, intron 4 of 5)"	-51664	NR_135064	101928510	Hs.675857	NR_135064		LOC101928510	-	uncharacterized LOC101928510	ncRNA	16	3.4	4.705882353	2.25E-05
chr11-1454	chr11	36335538	36337756	+	43.5	2218	"intron (NM_001160167, intron 1 of 8)"	"intron (NM_001160167, intron 1 of 8)"	18922	NM_001160167	79899	Hs.19987	NM_024841	ENSG00000135362	PRR5L	PROTOR2	proline rich 5 like	protein-coding	43.53	6.8	6.401470588	8.79E-17
chr11-146	chr11	2818286	2819286	+	21.8	1000	"intron (NM_000218, intron 15 of 15)"	"intron (NM_000218, intron 15 of 15)"	64013	NR_130721	338653	Hs.639425	NR_130721	ENSG00000229414	KCNQ1-AS1	-	KCNQ1 antisense RNA 1	ncRNA	21.76	4.37	4.979405034	1.32E-07
chr11-1461	chr11	44345543	44346811	+	19.8	1268	Intergenic	Intergenic	-14461	NM_021926	60529	Hs.436055	NM_021926	ENSG00000052850	ALX4	CRS5|FND2	ALX homeobox 4	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr11-1462	chr11	44360790	44362310	+	23	1520	Intergenic	AluJb|SINE|Alu	-29834	NM_021926	60529	Hs.436055	NM_021926	ENSG00000052850	ALX4	CRS5|FND2	ALX homeobox 4	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr11-1463	chr11	44380397	44383116	+	48	2719	Intergenic	Intergenic	-50040	NM_021926	60529	Hs.436055	NM_021926	ENSG00000052850	ALX4	CRS5|FND2	ALX homeobox 4	protein-coding	48.01	4.37	10.98627002	1.39E-25
chr11-1464	chr11	44548268	44549268	+	16	1000	Intergenic	Intergenic	-38373	NM_002231	3732	Hs.527778	NM_002231	ENSG00000085117	CD82	4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27	CD82 molecule	protein-coding	16	3.88	4.12371134	7.91E-05
chr11-1465	chr11	44810121	44811121	+	14.7	1000	"intron (NM_130783, intron 1 of 8)"	"intron (NM_130783, intron 1 of 8)"	24645	NM_130783	90139	Hs.385634	NM_130783	ENSG00000157570	TSPAN18	TSPAN	tetraspanin 18	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr11-1470	chr11	45323376	45326314	+	39	2938	Intergenic	MIRb|SINE|MIR	-16961	NM_001247987	57586	Hs.436643	NM_020826	ENSG00000019505	SYT13	-	synaptotagmin 13	protein-coding	39.04	6.8	5.741176471	1.26E-13
chr11-1472	chr11	45491601	45492601	+	16.6	1000	Intergenic	Intergenic	99153	NR_122071	399886	Hs.559970	NR_122071	ENSG00000255267	LOC399886	-	uncharacterized LOC399886	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr11-1479	chr11	46353467	46357009	+	93.5	3542	"intron (NM_201532, intron 1 of 30)"	"intron (NM_201532, intron 1 of 30)"	783	NM_201532	8525	Hs.502461	NM_003646	ENSG00000149091	DGKZ	DAGK5|DAGK6|DGK-ZETA|hDGKzeta	diacylglycerol kinase zeta	protein-coding	93.45	11.65	8.021459227	2.91E-40
chr11-148	chr11	8801834	8803092	+	23	1258	"intron (NR_120590, intron 1 of 4)"	"intron (NR_120590, intron 1 of 4)"	12138	NR_120590	102724784	Hs.613276	NR_120590		LOC102724784	-	uncharacterized LOC102724784	ncRNA	23.04	2.91	7.917525773	4.85E-11
chr11-1486	chr11	57107657	57108657	+	16	1000	"intron (NM_002559, intron 1 of 11)"	L2b|LINE|L2	2316	NM_002559	5024	Hs.146738	NM_002559	ENSG00000109991	P2RX3	P2X3	purinergic receptor P2X 3	protein-coding	16	0.97	16.49484536	3.54E-11
chr11-1494	chr11	61478026	61479425	+	23	1399	"intron (NM_006133, intron 1 of 19)"	"intron (NM_006133, intron 1 of 19)"	30820	NM_006133	747	Hs.241564	NM_006133	ENSG00000134780	DAGLA	C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR	diacylglycerol lipase alpha	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr11-150	chr11	12701686	12702686	+	22.4	1000	"intron (NM_021961, intron 2 of 12)"	"intron (NM_021961, intron 2 of 12)"	6217	NM_021961	7003	Hs.655331	NM_021961	ENSG00000187079	TEAD1	AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1	TEA domain transcription factor 1	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr11-1501	chr11	62780985	62783606	+	49.9	2621	"exon (NM_004254, exon 2 of 11)"	"exon (NM_004254, exon 2 of 11)"	1022	NM_001184733	9376	Hs.266223	NM_004254	ENSG00000149452	SLC22A8	OAT3	solute carrier family 22 member 8	protein-coding	49.93	8.74	5.712814645	2.17E-17
chr11-1504	chr11	63801715	63805652	+	64	3937	"intron (NM_014067, intron 3 of 10)"	CpG	50358	NM_017670	55611	Hs.473788	NM_017670	ENSG00000167770	OTUB1	HSPC263|OTB1|OTU1	"OTU deubiquitinase, ubiquitin aldehyde binding 1"	protein-coding	64.01	4.85	13.19793814	6.99E-38
chr11-1508	chr11	64706968	64707968	+	16.6	1000	"intron (NM_001300803, intron 7 of 8)"	"intron (NM_001300803, intron 7 of 8)"	-4108	NM_130769	170589	Hs.436119	NM_130769	ENSG00000149735	GPHA2	A2|GPA2|ZSIG51	glycoprotein hormone alpha 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr11-1509	chr11	65710189	65712029	+	28.8	1840	Intergenic	Intergenic	-2006	NM_152762	254187	Hs.350671	NM_152762	ENSG00000175513	TSGA10IP	FAM161C	testis specific 10 interacting protein	protein-coding	28.8	3.88	7.422680412	1.97E-12
chr11-1512	chr11	66811592	66812592	+	16.6	1000	"exon (NM_001177880, exon 6 of 8)"	"exon (NM_001177880, exon 6 of 8)"	-1022	NR_106920	102465518		NR_106920	ENSG00000283326	MIR6860	hsa-mir-6860	microRNA 6860	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr11-1515	chr11	68424515	68428235	+	51.2	3720	Intergenic	Intergenic	-25568	NM_015973	51083	Hs.278959	NM_015973	ENSG00000069482	GAL	ETL8|GAL-GMAP|GALN|GLNN|GMAP	galanin and GMAP prepropeptide	protein-coding	51.21	9.71	5.273944387	1.19E-16
chr11-1518	chr11	68945682	68948587	+	41	2905	Intergenic	Intergenic	-8104	NR_104161	338694	Hs.564235	NR_104161	ENSG00000261070	LOC338694	-	uncharacterized LOC338694	ncRNA	40.97	7.77	5.272844273	1.22E-13
chr11-152	chr11	18764503	18766065	+	28.2	1562	"intron (NM_032781, intron 4 of 14)"	"intron (NM_032781, intron 4 of 14)"	-17507	NM_173588	283284	Hs.434152	NM_173588	ENSG00000179057	IGSF22	IGFN2	immunoglobulin superfamily member 22	protein-coding	28.16	1.94	14.51546392	1.99E-18
chr11-1522	chr11	69349098	69350648	+	25	1550	Intergenic	L1MB3|LINE|L1	49544	NR_120545	101928292	Hs.736219	NR_120542		LINC01488	BRCAT8	long intergenic non-protein coding RNA 1488	ncRNA	24.96	1.46	17.09589041	3.23E-17
chr11-1525	chr11	69435166	69436424	+	19.2	1258	Intergenic	Intergenic	-20078	NM_053056	595	Hs.523852	NM_053056	ENSG00000110092	CCND1	BCL1|D11S287E|PRAD1|U21B31	cyclin D1	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr11-1528	chr11	69676067	69677659	+	23	1592	Intergenic	L2a|LINE|L2	-42671	NM_005247	2248	Hs.37092	NM_005247	ENSG00000186895	FGF3	HBGF-3|INT2	fibroblast growth factor 3	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr11-1530	chr11	69944319	69946379	+	33.3	2060	"intron (NM_018043, intron 2 of 25)"	"intron (NM_018043, intron 2 of 25)"	13833	NR_030691	55107	Hs.503074	NM_018043	ENSG00000131620	ANO1	DOG1|ORAOV2|TAOS2|TMEM16A	anoctamin 1	protein-coding	33.28	2.91	11.43642612	5.32E-19
chr11-1541	chr11	70456352	70457696	+	22.4	1344	"intron (NM_012309, intron 14 of 22)"	"intron (NM_012309, intron 14 of 22)"	-20175	NR_046567	100874198	Hs.656610	NR_046567	ENSG00000226627	SHANK2-AS1	-	SHANK2 antisense RNA 1	ncRNA	22.4	2.91	7.697594502	3.87E-10
chr11-1548	chr11	72340403	72341762	+	25.6	1359	"intron (NM_002599, intron 2 of 30)"	"intron (NM_002599, intron 2 of 30)"	12422	NM_001243784	5138	Hs.503163	NM_002599	ENSG00000186642	PDE2A	CGS-PDE|PDE2A1|PED2A4|cGSPDE	phosphodiesterase 2A	protein-coding	25.6	1.46	17.53424658	1.83E-18
chr11-1549	chr11	72372955	72373955	+	17.3	1000	"intron (NM_002599, intron 1 of 30)"	"intron (NM_002599, intron 1 of 30)"	6653	NM_001146209	5138	Hs.503163	NM_002599	ENSG00000186642	PDE2A	CGS-PDE|PDE2A1|PED2A4|cGSPDE	phosphodiesterase 2A	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr11-1551	chr11	74881696	74882961	+	17.9	1265	"intron (NM_001145211, intron 6 of 13)"	AluJr|SINE|Alu	11484	NM_001145211	11309	Hs.7884	NM_007256	ENSG00000137491	SLCO2B1	OATP-B|OATP2B1|OATPB|SLC21A9	solute carrier organic anion transporter family member 2B1	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr11-1555	chr11	75318082	75319082	+	16	1000	"intron (NM_207577, intron 2 of 2)"	"intron (NM_207577, intron 2 of 2)"	45481	NM_001235	871	Hs.596449	NM_001235	ENSG00000149257	SERPINH1	AsTP3|CBP1|CBP2|HSP47|OI10|PIG14|PPROM|RA-A47|SERPINH2|gp46	serpin family H member 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr11-1556	chr11	75347403	75348659	+	20.5	1256	"intron (NM_207577, intron 1 of 2)"	MER74A|LTR|ERVL	31448	NM_207577	4135	Hs.585540	NM_033063	ENSG00000171533	MAP6	MAP6-N|MTAP6|N-STOP|STOP	microtubule associated protein 6	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr11-1557	chr11	75890196	75891196	+	16	1000	Intergenic	Intergenic	26878	NM_004626	7481	Hs.108219	NM_004626	ENSG00000085741	WNT11	HWNT11	Wnt family member 11	protein-coding	16	0	16.4818808	1.26E-14
chr11-1560	chr11	78643471	78644471	+	16.6	1000	"intron (NM_001098816, intron 6 of 33)"	MER1B|DNA|hAT-Charlie	-358062	NM_024678	79731	Hs.503389	NM_024678	ENSG00000137513	NARS2	DFNB94|SLM5|asnRS	"asparaginyl-tRNA synthetase 2, mitochondrial (putative)"	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr11-1562	chr11	85423050	85424050	+	17.3	1000	"intron (NM_206930, intron 1 of 8)"	"intron (NM_206930, intron 1 of 8)"	6673	NM_001289610	54843	Hs.369520	NM_032379	ENSG00000137501	SYTL2	CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A	synaptotagmin like 2	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr11-1564	chr11	85465299	85471486	+	101.8	6187	"intron (NM_001289608, intron 1 of 18)"	"intron (NM_001289608, intron 1 of 18)"	720	NM_001162951	54843	Hs.369520	NM_032379	ENSG00000137501	SYTL2	CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A	synaptotagmin like 2	protein-coding	101.77	17.96	5.666481069	4.51E-33
chr11-1565	chr11	86340669	86341669	+	16	1000	"intron (NM_001014811, intron 1 of 13)"	"intron (NM_001014811, intron 1 of 13)"	42071	NM_001014811	10873	Hs.199743	NM_006680	ENSG00000151376	ME3	NADP-ME	malic enzyme 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr11-1566	chr11	86405462	86407085	+	24.3	1623	Intergenic	Intergenic	-22595	NM_001161586	10873	Hs.199743	NM_006680	ENSG00000151376	ME3	NADP-ME	malic enzyme 3	protein-coding	24.32	5.34	4.554307116	9.72E-08
chr11-157	chr11	44325541	44328768	+	69.1	3227	"intron (NM_021926, intron 1 of 3)"	"intron (NM_021926, intron 1 of 3)"	4562	NM_021926	60529	Hs.436055	NM_021926	ENSG00000052850	ALX4	CRS5|FND2	ALX homeobox 4	protein-coding	69.13	6.8	10.16617647	3.33E-35
chr11-1576	chr11	103271797	103272797	+	16	1000	"intron (NM_001377, intron 84 of 88)"	MIR|SINE|MIR	292137	NM_001080463	79659	Hs.503721	NM_001377	ENSG00000187240	DYNC2H1	ATD3|DHC1b|DHC2|DNCH2|DYH1B|SRPS2B|SRTD3|hdhc11	dynein cytoplasmic 2 heavy chain 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr11-1583	chr11	113984733	113985733	+	16.6	1000	"intron (NM_001018011, intron 2 of 6)"	"intron (NM_001018011, intron 2 of 6)"	53945	NM_001018011	7704	Hs.591945	NM_006006	ENSG00000109906	ZBTB16	PLZF|ZNF145	zinc finger and BTB domain containing 16	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-1587	chr11	114590040	114591040	+	16	1000	Intergenic	Intergenic	41340	NM_182495	120406	Hs.446760	NM_182495	ENSG00000204361	NXPE2	FAM55B	neurexophilin and PC-esterase domain family member 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr11-1590	chr11	116231900	116233572	+	26.2	1672	Intergenic	Intergenic	-277403	NR_135069	101929011	Hs.733911	NR_135069	ENSG00000237937	LOC101929011	-	uncharacterized LOC101929011	ncRNA	26.24	5.34	4.913857678	2.00E-08
chr11-1600	chr11	117579426	117586934	+	97.9	7508	"intron (NM_020693, intron 3 of 32)"	Eulor1|DNA|DNA	84796	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	97.93	16.99	5.763978811	2.41E-32
chr11-1604	chr11	117786540	117788325	+	29.4	1785	"intron (NM_001206789, intron 2 of 11)"	"intron (NM_001206789, intron 2 of 11)"	12736	NM_001206790	84000	Hs.266308	NM_032046	ENSG00000137747	TMPRSS13	MSP|MSPL|MSPS|TMPRSS11	"transmembrane protease, serine 13"	protein-coding	29.44	4.85	6.070103093	2.13E-11
chr11-1606	chr11	117902448	117903448	+	17.3	1000	"intron (NR_038318, intron 2 of 3)"	L1MC4|LINE|L1	-44779	NM_019894	56649	Hs.161985	NM_019894	ENSG00000137648	TMPRSS4	CAPH2|MT-SP2|TMPRSS3	"transmembrane protease, serine 4"	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr11-1608	chr11	117954030	117955299	+	21.1	1269	"intron (NM_001173552, intron 1 of 11)"	AluSx1|SINE|Alu	2844	NR_038318	100526771	Hs.627426	NR_038318	ENSG00000255274	TMPRSS4-AS1	-	TMPRSS4 antisense RNA 1	ncRNA	21.12	1.94	10.88659794	9.02E-12
chr11-1609	chr11	118016549	118017549	+	16.6	1000	promoter-TSS (NR_024527)	promoter-TSS (NR_024527)	-865	NR_024527	6330	Hs.65239	NM_174934	ENSG00000177098	SCN4B	ATFB17|LQT10|Navbeta4	sodium voltage-gated channel beta subunit 4	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-162	chr11	69448788	69450444	+	29.4	1656	Intergenic	Intergenic	-6257	NM_053056	595	Hs.523852	NM_053056	ENSG00000110092	CCND1	BCL1|D11S287E|PRAD1|U21B31	cyclin D1	protein-coding	29.44	2.91	10.11683849	7.13E-16
chr11-1622	chr11	119610064	119611715	+	27.5	1651	TTS (NR_120587)	TTS (NR_120587)	10596	NR_120587	102724301	Hs.637640	NR_120587	ENSG00000254854	LOC102724301	-	uncharacterized LOC102724301	ncRNA	27.52	3.88	7.092783505	1.44E-11
chr11-1628	chr11	119881446	119882704	+	19.8	1258	Intergenic	L3|LINE|CR1	117546	NM_001330382	23650	Hs.504115	NM_012101	ENSG00000137699	TRIM29	ATDC	tripartite motif containing 29	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr11-1629	chr11	119928379	119933074	+	66.6	4695	Intergenic	MER67C|LTR|ERV1	68895	NM_001330382	23650	Hs.504115	NM_012101	ENSG00000137699	TRIM29	ATDC	tripartite motif containing 29	protein-coding	66.57	15.05	4.423255814	5.58E-18
chr11-1632	chr11	119997791	120000891	+	48.6	3100	"intron (NM_012101, intron 1 of 8)"	L2a|LINE|L2	280	NM_001330382	23650	Hs.504115	NM_012101	ENSG00000137699	TRIM29	ATDC	tripartite motif containing 29	protein-coding	48.65	4.85	10.03092784	4.72E-25
chr11-1633	chr11	120002419	120005564	+	49.9	3145	"intron (NM_012101, intron 1 of 8)"	"intron (NM_012101, intron 1 of 8)"	-4370	NM_001330382	23650	Hs.504115	NM_012101	ENSG00000137699	TRIM29	ATDC	tripartite motif containing 29	protein-coding	49.93	4.85	10.29484536	4.58E-26
chr11-1636	chr11	120102333	120105125	+	38.4	2792	Intergenic	L1M5|LINE|L1	-3620	NM_001244682	25833	Hs.227115	NM_014352	ENSG00000137709	POU2F3	Epoc-1|OCT-11|OCT11|OTF-11|PLA-1|PLA1|Skn-1a	POU class 2 homeobox 3	protein-coding	38.4	5.82	6.597938144	2.56E-15
chr11-1639	chr11	120646582	120647582	+	16.6	1000	"intron (NM_001282470, intron 2 of 19)"	"intron (NM_001282470, intron 2 of 19)"	42742	NR_133008	105369532	Hs.694510	NR_133008		LOC105369532	-	uncharacterized LOC105369532	ncRNA	16.64	0	17.14115603	3.68E-16
chr11-1642	chr11	121107020	121108020	+	16.6	1000	Intergenic	LTR14B|LTR|ERVK	-55868	NM_006918	6309	Hs.287749	NM_006918	ENSG00000109929	SC5D	ERG3|S5DES|SC5DL	sterol-C5-desaturase	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-1645	chr11	121255753	121256753	+	16	1000	Intergenic	Intergenic	-66659	NM_003105	6653	Hs.368592	NM_003105	ENSG00000137642	SORL1	C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250	sortilin related receptor 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr11-1646	chr11	122077556	122078556	+	14.1	1000	"intron (NR_137179, intron 2 of 4)"	"intron (NR_137179, intron 2 of 4)"	-4239	NR_137181	399959	Hs.44098	NR_024430		MIR100HG	AGD1|linc-NeD125|lncRNA-N2	mir-100-let-7a-2 cluster host gene	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr11-165	chr11	75293783	75294783	+	22.4	1000	Intergenic	CpG	21182	NM_001235	871	Hs.596449	NM_001235	ENSG00000149257	SERPINH1	AsTP3|CBP1|CBP2|HSP47|OI10|PIG14|PPROM|RA-A47|SERPINH2|gp46	serpin family H member 1	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr11-1650	chr11	123099515	123100515	+	16	1000	Intergenic	MIR3|SINE|MIR	-34002	NM_024769	79827	Hs.591949	NM_024769	ENSG00000166250	CLMP	ACAM|ASAM|CSBM|CSBS	CXADR like membrane protein	protein-coding	16	3.88	4.12371134	7.91E-05
chr11-1653	chr11	124056687	124057687	+	15.4	1000	Intergenic	Intergenic	-38157	NM_001291438	26492	Hs.381319	NM_001291438		OR8G2	HSTPCR120|OR8G2P|OR8G4|ORL206|ORL486|TPCR120	olfactory receptor family 8 subfamily G member 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr11-1656	chr11	124618493	124622011	+	61.4	3518	"intron (NM_001329920, intron 3 of 5)"	"intron (NM_001329920, intron 3 of 5)"	1916	NM_001329920	23584	Hs.112377	NM_014312	ENSG00000019102	VSIG2	2210413P10Rik|CTH|CTXL	V-set and immunoglobulin domain containing 2	protein-coding	61.45	5.82	10.55841924	3.60E-32
chr11-1658	chr11	124717442	124720138	+	42.9	2696	Intergenic	Intergenic	-16515	NM_022370	64221	Hs.435621	NM_022370	ENSG00000154134	ROBO3	HGPPS|HGPS|RBIG1|RIG1	roundabout guidance receptor 3	protein-coding	42.89	7.28	5.891483516	3.82E-15
chr11-1663	chr11	125230723	125231723	+	16.6	1000	"intron (NM_022062, intron 4 of 12)"	L2b|LINE|L2	-133887	NM_001301851	403312	Hs.450611	NM_203452		LOC403312	-	putative uncharacterized protein MGC39545	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr11-1665	chr11	125270747	125271747	+	16.6	1000	"intron (NM_022062, intron 7 of 12)"	"intron (NM_022062, intron 7 of 12)"	-93863	NM_001301851	403312	Hs.450611	NM_203452		LOC403312	-	putative uncharacterized protein MGC39545	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr11-1669	chr11	126377364	126378364	+	17.3	1000	"intron (NM_032531, intron 4 of 16)"	"intron (NM_032531, intron 4 of 16)"	101787	NM_001254759	6484	Hs.591947	NM_006278	ENSG00000110080	ST3GAL4	CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST3GalIV|STZ	"ST3 beta-galactoside alpha-2,3-sialyltransferase 4"	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr11-1670	chr11	126421884	126423158	+	19.2	1274	"intron (NM_032531, intron 2 of 16)"	AluSq|SINE|Alu	-100152	NR_120532	101929427	Hs.600341	NR_120532	ENSG00000254607	LOC101929427	-	uncharacterized LOC101929427	ncRNA	19.2	2.43	7.901234568	1.91E-09
chr11-1675	chr11	126567683	126568683	+	16.6	1000	"intron (NM_032531, intron 1 of 16)"	"intron (NM_032531, intron 1 of 16)"	42202	NR_120533	101929427	Hs.600341	NR_120532	ENSG00000254607	LOC101929427	-	uncharacterized LOC101929427	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr11-1677	chr11	126610550	126611550	+	16.6	1000	"intron (NM_032531, intron 1 of 16)"	"intron (NM_032531, intron 1 of 16)"	85069	NR_120533	101929427	Hs.600341	NR_120532	ENSG00000254607	LOC101929427	-	uncharacterized LOC101929427	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr11-1680	chr11	126798272	126799272	+	16.6	1000	"intron (NM_032531, intron 1 of 16)"	"intron (NM_032531, intron 1 of 16)"	-11870	NR_046986	100874251	Hs.319053	NR_046986	ENSG00000254960	KIRREL3-AS2	-	KIRREL3 antisense RNA 2	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr11-1681	chr11	126812579	126813861	+	21.1	1282	"intron (NR_046986, intron 1 of 2)"	"intron (NR_046986, intron 1 of 2)"	2578	NR_046986	100874251	Hs.319053	NR_046986	ENSG00000254960	KIRREL3-AS2	-	KIRREL3 antisense RNA 2	ncRNA	21.12	4.37	4.832951945	6.64E-07
chr11-1684	chr11	126978657	126980190	+	21.1	1533	Intergenic	Intergenic	42526	NR_120578	101929473	Hs.737523	NR_120578	ENSG00000255087	LOC101929473	-	uncharacterized LOC101929473	ncRNA	21.12	4.85	4.354639175	2.52E-06
chr11-1686	chr11	126988593	126989593	+	16	1000	Intergenic	Intergenic	52196	NR_120578	101929473	Hs.737523	NR_120578	ENSG00000255087	LOC101929473	-	uncharacterized LOC101929473	ncRNA	16	3.4	4.705882353	2.25E-05
chr11-1687	chr11	127298965	127299965	+	16	1000	Intergenic	Intergenic	158500	NR_120580	101929497	Hs.737442	NR_120580	ENSG00000273409	LOC101929497	-	uncharacterized LOC101929497	ncRNA	16	2.91	5.498281787	4.98E-06
chr11-1689	chr11	128777183	128779481	+	33.9	2298	"intron (NM_000890, intron 1 of 2)"	"intron (NM_000890, intron 1 of 2)"	-2206	NR_045767	219833	Hs.689860	NM_145013	ENSG00000174370	C11orf45	-	chromosome 11 open reading frame 45	protein-coding	33.92	4.85	6.993814433	7.28E-14
chr11-1691	chr11	128787865	128789116	+	18.6	1251	TTS (NM_000890)	TTS (NM_000890)	-12364	NR_045767	219833	Hs.689860	NM_145013	ENSG00000174370	C11orf45	-	chromosome 11 open reading frame 45	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr11-1693	chr11	129198957	129199957	+	16.6	1000	Intergenic	AluSz|SINE|Alu	-46424	NM_003658	8538	Hs.591944	NM_003658	ENSG00000043039	BARX2	-	BARX homeobox 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr11-1695	chr11	129294712	129295712	+	17.3	1000	"intron (NM_003658, intron 1 of 3)"	"intron (NM_003658, intron 1 of 3)"	49331	NM_003658	8538	Hs.591944	NM_003658	ENSG00000043039	BARX2	-	BARX homeobox 2	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr11-1696	chr11	129608266	129609266	+	16.6	1000	Intergenic	MER102b|DNA|hAT-Charlie	-76910	NM_138788	120224	Hs.504301	NM_138788	ENSG00000151715	TMEM45B	-	transmembrane protein 45B	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-1707	chr11	133092597	133093597	+	16	1000	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	-279434	NM_001319105	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	16	2.91	5.498281787	4.98E-06
chr11-1716	chr11	134340538	134341806	+	19.2	1268	"intron (NR_033852, intron 3 of 5)"	"intron (NR_033852, intron 3 of 5)"	34796	NR_033852	283177	Hs.504390	NR_033852		LOC283177	-	uncharacterized LOC283177	ncRNA	19.2	4.37	4.393592677	3.16E-06
chr11-1718	chr11	134613576	134614576	+	16.6	1000	Intergenic	Intergenic	-241170	NR_135050	100507548	Hs.639995	NR_135050		LOC100507548	-	uncharacterized LOC100507548	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr11-1721	chr11	1422064	1423064	+	16.6	1000	"intron (NR_046331, intron 1 of 20)"	"intron (NR_046331, intron 1 of 20)"	-9109	NM_001282218	9024	Hs.170819	NM_003957	ENSG00000174672	BRSK2	C11orf7|PEN11B|SAD1|SADA|STK29	BR serine/threonine kinase 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-1725	chr11	1669313	1670313	+	16	1000	Intergenic	Intergenic	-17016	NR_026643	387742	Hs.567908	NM_001014374	ENSG00000205866	FAM99A	-	family with sequence similarity 99 member A (non-protein coding)	ncRNA	16	2.91	5.498281787	4.98E-06
chr11-1726	chr11	1690706	1691706	+	16	1000	Intergenic	Intergenic	4377	NR_026643	387742	Hs.567908	NM_001014374	ENSG00000205866	FAM99A	-	family with sequence similarity 99 member A (non-protein coding)	ncRNA	16	1.94	8.24742268	7.67E-08
chr11-1727	chr11	1700201	1701201	+	16.6	1000	Intergenic	AluSq2|SINE|Alu	6158	NR_026642	100132464	Hs.117797	NR_026642	ENSG00000205865	FAM99B	-	family with sequence similarity 99 member B (non-protein coding)	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr11-173	chr11	119935779	119937350	+	32	1571	Intergenic	Intergenic	63057	NM_001330382	23650	Hs.504115	NM_012101	ENSG00000137699	TRIM29	ATDC	tripartite motif containing 29	protein-coding	32	7.77	4.118404118	7.28E-09
chr11-1730	chr11	1919534	1922100	+	41	2566	"intron (NR_120534, intron 1 of 3)"	MER57A-int|LTR|ERV1	2828	NR_120534	101927624	Hs.523404	NR_120534		LINC01150	2G7|TCONS_00019134	long intergenic non-protein coding RNA 1150	ncRNA	40.97	4.85	8.44742268	3.22E-19
chr11-1735	chr11	2052723	2055147	+	39.7	2424	Intergenic	Intergenic	-31239	NR_131224	283120	Hs.533566	NR_002196	ENSG00000130600	H19	ASM|ASM1|BWS|D11S813E|LINC00008|NCRNA00008|WT2	"H19, imprinted maternally expressed transcript (non-protein coding)"	ncRNA	39.69	4.85	8.183505155	2.73E-18
chr11-1736	chr11	2105460	2106460	+	16.6	1000	Intergenic	L1ME1|LINE|L1	49479	NR_030158	619552		NR_030158	ENSG00000207805	MIR483	MIRN483|hsa-mir-483|mir-483	microRNA 483	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr11-1737	chr11	2153893	2156083	+	35.8	2190	TTS (NR_030158)	TTS (NR_030158)	451	NR_030158	619552		NR_030158	ENSG00000207805	MIR483	MIRN483|hsa-mir-483|mir-483	microRNA 483	ncRNA	35.84	6.8	5.270588235	3.95E-12
chr11-1738	chr11	2269588	2270588	+	15.4	1000	Intergenic	HERV16-int|LTR|ERVL	22094	NM_005170	430	Hs.152475	NM_005170	ENSG00000183734	ASCL2	ASH2|HASH2|MASH2|bHLHa45	achaete-scute family bHLH transcription factor 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-1743	chr11	2504050	2505050	+	14.7	1000	"intron (NM_181798, intron 1 of 15)"	L1MC4a|LINE|L1	21866	NM_181798	3784	Hs.95162	NM_000218	ENSG00000053918	KCNQ1	ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS	potassium voltage-gated channel subfamily Q member 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-1746	chr11	2559362	2562169	+	42.9	2807	"intron (NM_000218, intron 2 of 15)"	"intron (NM_000218, intron 2 of 15)"	78081	NM_181798	3784	Hs.95162	NM_000218	ENSG00000053918	KCNQ1	ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS	potassium voltage-gated channel subfamily Q member 1	protein-coding	42.89	6.31	6.797147385	7.07E-17
chr11-1750	chr11	2611709	2612709	+	16	1000	"intron (NM_000218, intron 10 of 15)"	"intron (NM_000218, intron 10 of 15)"	109019	NR_002728	10984	Hs.604823	NR_002728	ENSG00000269821	KCNQ1OT1	KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012	KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)	ncRNA	16	3.4	4.705882353	2.25E-05
chr11-1756	chr11	3079937	3082544	+	39	2607	Intergenic	AluSp|SINE|Alu	-2559	NM_139273	833	Hs.274873	NM_001751	ENSG00000110619	CARS	CARS1|CYSRS|MGC:11246	cysteinyl-tRNA synthetase	protein-coding	39.04	7.77	5.024453024	3.34E-12
chr11-1761	chr11	4811969	4812969	+	15.4	1000	Intergenic	Intergenic	13141	NM_001005177	119695	Hs.553563	NM_001005177	ENSG00000279270	OR52R1	OR11-22	olfactory receptor family 52 subfamily R member 1 (gene/pseudogene)	protein-coding	15.36	0	15.82260557	1.26E-14
chr11-1763	chr11	5755610	5756610	+	16	1000	Intergenic	Intergenic	-1568	NM_001005180	387748	Hs.689609	NM_001005180	ENSG00000181023	OR56B1	OR11-65|OR56B1P	olfactory receptor family 56 subfamily B member 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr11-1764	chr11	6307944	6311359	+	39.7	3415	Intergenic	MER41A|LTR|ERV1	28747	NM_176875	887	Hs.203	NM_176875	ENSG00000110148	CCKBR	CCK-B|CCK2R|GASR	cholecystokinin B receptor	protein-coding	39.69	6.31	6.290015848	3.11E-15
chr11-177	chr11	126523630	126525786	+	39	2156	"intron (NR_120532, intron 1 of 1)"	AT_rich|Low_complexity|Low_complexity	-1273	NR_120533	101929427	Hs.600341	NR_120532	ENSG00000254607	LOC101929427	-	uncharacterized LOC101929427	ncRNA	39.04	5.82	6.70790378	2.56E-15
chr11-1770	chr11	8319351	8322346	+	40.3	2995	Intergenic	Intergenic	-30666	NM_001270428	4004	Hs.654426	NM_002315	ENSG00000166407	LMO1	RBTN1|RHOM1|TTG1	LIM domain only 1	protein-coding	40.33	4.85	8.315463918	2.73E-18
chr11-1772	chr11	8759764	8760764	+	16.6	1000	"intron (NM_005418, intron 5 of 22)"	"intron (NM_005418, intron 5 of 22)"	-30061	NR_120590	102724784	Hs.613276	NR_120590		LOC102724784	-	uncharacterized LOC102724784	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr11-1774	chr11	8819800	8821195	+	19.2	1395	"intron (NR_120590, intron 4 of 4)"	AluSq2|SINE|Alu	11727	NM_213618	6764	Hs.117715	NM_005418	ENSG00000166444	ST5	DENND2B|HTS1|p126	suppression of tumorigenicity 5	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr11-1776	chr11	9068469	9070324	+	30.1	1855	"intron (NM_001170690, intron 11 of 17)"	"intron (NM_001170690, intron 11 of 17)"	42530	NR_049874	100847015		NR_049874	ENSG00000264984	MIR5691	-	microRNA 5691	ncRNA	30.08	5.34	5.632958801	1.33E-10
chr11-1778	chr11	9113821	9115490	+	23	1669	Intergenic	Intergenic	-1255	NR_027713	283102	Hs.689472	NR_027713	ENSG00000213538	KRT8P41	-	keratin 8 pseudogene 41	pseudo	23.04	1.94	11.87628866	6.71E-14
chr11-1784	chr11	10647874	10649546	+	25.6	1672	"intron (NM_001100163, intron 8 of 20)"	"intron (NM_001100163, intron 8 of 20)"	25138	NM_001098579	10335	Hs.501898	NM_130385	ENSG00000072952	MRVI1	IRAG|JAW1L	murine retrovirus integration site 1 homolog	protein-coding	25.6	1.94	13.19587629	4.03E-16
chr11-1787	chr11	11138108	11139459	+	19.2	1351	Intergenic	MIRb|SINE|MIR	236121	NM_001256686	283106	Hs.654675	NM_001256686	ENSG00000254598	CSNK2A3	CSNK2A1P	casein kinase 2 alpha 3	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr11-1799	chr11	12022457	12023457	+	16	1000	"intron (NM_001018057, intron 2 of 6)"	"intron (NM_001018057, intron 2 of 6)"	7229	NM_001018057	27122	Hs.292156	NM_013253	ENSG00000050165	DKK3	REIC|RIG	dickkopf WNT signaling pathway inhibitor 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr11-1800	chr11	12050802	12051802	+	15.4	1000	Intergenic	Intergenic	-1120	NR_135109	105376554	Hs.523483	NR_135109	ENSG00000254486	LOC105376554	-	uncharacterized LOC105376554	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr11-1801	chr11	12490190	12493687	+	46.7	3497	"intron (NM_018222, intron 1 of 12)"	MIR|SINE|MIR	92912	NM_018222	55742	Hs.432914	NM_018222	ENSG00000197702	PARVA	CH-ILKBP|MXRA2	parvin alpha	protein-coding	46.73	7.77	6.014157014	1.14E-16
chr11-1802	chr11	12536502	12537502	+	16	1000	"intron (NM_018222, intron 10 of 12)"	"intron (NM_018222, intron 10 of 12)"	137976	NM_018222	55742	Hs.432914	NM_018222	ENSG00000197702	PARVA	CH-ILKBP|MXRA2	parvin alpha	protein-coding	16	3.88	4.12371134	7.91E-05
chr11-1809	chr11	13351065	13352065	+	14.1	1000	"intron (NM_001297719, intron 3 of 19)"	"intron (NM_001297719, intron 3 of 19)"	52291	NM_001297722	406	Hs.65734	NM_001178	ENSG00000133794	ARNTL	BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5	aryl hydrocarbon receptor nuclear translocator like	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr11-1810	chr11	13380184	13383402	+	44.8	3218	"intron (NM_001030272, intron 7 of 18)"	"intron (NM_001030272, intron 7 of 18)"	80033	NM_001297742	84280	Hs.332382	NM_032320	ENSG00000148925	BTBD10	GMRP-1|GMRP1	BTB domain containing 10	protein-coding	44.81	9.22	4.860086768	9.30E-14
chr11-1819	chr11	15299170	15300170	+	16.6	1000	Intergenic	L1ME4a|LINE|L1	129022	NM_001278313	387755	Hs.591997	NM_001031853	ENSG00000188487	INSC	-	inscuteable homolog (Drosophila)	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr11-1820	chr11	15643982	15644982	+	16	1000	Intergenic	Intergenic	-20949	NM_001293172	102724957	Hs.512245	NM_001293172	ENSG00000254695	LOC102724957	-	uncharacterized LOC102724957	protein-coding	16	2.43	6.58436214	7.90E-07
chr11-1821	chr11	15795499	15797083	+	26.9	1584	Intergenic	Intergenic	130860	NM_001293172	102724957	Hs.512245	NM_001293172	ENSG00000254695	LOC102724957	-	uncharacterized LOC102724957	protein-coding	26.88	3.4	7.905882353	1.25E-12
chr11-1823	chr11	15957041	15958041	+	16	1000	Intergenic	Intergenic	33626	NR_106721	102464826		NR_106721	ENSG00000110693	MIR6073	hsa-mir-6073	microRNA 6073	ncRNA	16	1.94	8.24742268	7.67E-08
chr11-1828	chr11	17495110	17497763	+	41.6	2653	"exon (NM_000352, exon 2 of 39)"	"exon (NM_000352, exon 2 of 39)"	1956	NM_001287174	6833	Hs.54470	NM_000352	ENSG00000006071	ABCC8	ABC36|HHF1|HI|HRINS|MRP8|PHHI|SUR|SUR1|SUR1delta2|TNDM2	ATP binding cassette subfamily C member 8	protein-coding	41.61	7.77	5.355212355	1.22E-13
chr11-1831	chr11	17713715	17715032	+	21.1	1317	Intergenic	L2a|LINE|L2	4113	NR_132279	102723330	Hs.471111	NR_132279	ENSG00000255335	LOC102723330	-	uncharacterized LOC102723330	ncRNA	21.12	3.88	5.443298969	1.44E-07
chr11-1838	chr11	19952364	19953364	+	14.1	1000	"intron (NM_182964, intron 6 of 37)"	"intron (NM_182964, intron 6 of 37)"	-91238	NM_001111019	89797	Hs.64341	NM_145117	ENSG00000166833	NAV2	HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2	neuron navigator 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr11-1839	chr11	19973768	19975292	+	24.3	1524	"intron (NM_182964, intron 10 of 37)"	"intron (NM_182964, intron 10 of 37)"	-69572	NM_001111019	89797	Hs.64341	NM_145117	ENSG00000166833	NAV2	HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2	neuron navigator 2	protein-coding	24.32	5.34	4.554307116	9.72E-08
chr11-1840	chr11	20118752	20119752	+	16.6	1000	"exon (NM_001111018, exon 31 of 38)"	"exon (NM_001111018, exon 31 of 38)"	-48403	NR_046672	100874014	Hs.557916	NR_046672	ENSG00000254453	NAV2-AS2	-	NAV2 antisense RNA 2	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr11-1841	chr11	20178376	20180226	+	32.6	1850	"intron (NM_001029865, intron 2 of 3)"	"intron (NM_001029865, intron 2 of 3)"	2569	NM_001029865	120237	Hs.558604	NM_001029865	ENSG00000109851	DBX1	-	developing brain homeobox 1	protein-coding	32.64	4.37	7.469107551	5.18E-14
chr11-1847	chr11	31865159	31866159	+	15.4	1000	"intron (NR_033971, intron 1 of 2)"	L1MD3|LINE|L1	17545	NR_117094	103157000		NR_117094	ENSG00000281880	PAUPAR	-	PAX6 upstream antisense RNA	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr11-1848	chr11	31924809	31926628	+	29.4	1819	Intergenic	Intergenic	77604	NR_117094	103157000		NR_117094	ENSG00000281880	PAUPAR	-	PAX6 upstream antisense RNA	ncRNA	29.44	4.85	6.070103093	2.13E-11
chr11-1850	chr11	32380357	32381357	+	15.4	1000	Intergenic	Intergenic	71506	NM_001198552	7490	Hs.591980	NM_000378	ENSG00000184937	WT1	AWT1|EWS-WT1|GUD|NPHS4|WAGR|WIT-2|WT33	Wilms tumor 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr11-1853	chr11	33494484	33495758	+	17.3	1274	Intergenic	Intergenic	-68756	NM_012194	25758	Hs.502266	NM_012194	ENSG00000110427	KIAA1549L	C11orf41|C11orf69|G2	KIAA1549 like	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr11-1854	chr11	33546251	33547251	+	16	1000	Intergenic	L1PB1|LINE|L1	-17126	NM_012194	25758	Hs.502266	NM_012194	ENSG00000110427	KIAA1549L	C11orf41|C11orf69|G2	KIAA1549 like	protein-coding	16	2.43	6.58436214	7.90E-07
chr11-1858	chr11	33851835	33853258	+	18.6	1423	Intergenic	Intergenic	38825	NM_001142316	4005	Hs.34560	NM_005574	ENSG00000135363	LMO2	RBTN2|RBTNL1|RHOM2|TTG2	LIM domain only 2	protein-coding	18.56	1.46	12.71232877	2.41E-11
chr11-1859	chr11	34204211	34205508	+	17.3	1297	"intron (NM_145804, intron 3 of 16)"	AluJb|SINE|Alu	77748	NM_001144030	55226	Hs.577281	NM_024662	ENSG00000135372	NAT10	ALP|NET43	N-acetyltransferase 10	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr11-1862	chr11	34511334	34512677	+	19.2	1343	"intron (NM_001243081, intron 2 of 5)"	"intron (NM_001243081, intron 2 of 5)"	21341	NM_001243081	2001	Hs.11713	NM_001422	ENSG00000135374	ELF5	ESE2	E74 like ETS transcription factor 5	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr11-1868	chr11	35434828	35435828	+	16	1000	"intron (NM_001252652, intron 1 of 11)"	"intron (NM_001252652, intron 1 of 11)"	5777	NM_004171	6506	Hs.502338	NM_004171	ENSG00000110436	SLC1A2	EAAT2|EIEE41|GLT-1|HBGT	solute carrier family 1 member 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr11-1869	chr11	35541546	35542826	+	20.5	1280	"intron (NM_001282675, intron 2 of 12)"	"intron (NM_001282675, intron 2 of 12)"	5393	NM_015430	25891	Hs.55044	NM_015430	ENSG00000149090	PAMR1	DKFZP586H2123|FP938|RAMP	peptidase domain containing associated with muscle regeneration 1	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr11-187	chr11	2511270	2513373	+	39.7	2103	"intron (NM_181798, intron 1 of 15)"	L1MA3|LINE|L1	29637	NM_181798	3784	Hs.95162	NM_000218	ENSG00000053918	KCNQ1	ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS	potassium voltage-gated channel subfamily Q member 1	protein-coding	39.69	2.91	13.63917526	1.57E-24
chr11-1870	chr11	35544351	35546627	+	43.5	2276	"intron (NM_001282675, intron 2 of 12)"	"intron (NM_001282675, intron 2 of 12)"	2090	NM_015430	25891	Hs.55044	NM_015430	ENSG00000149090	PAMR1	DKFZP586H2123|FP938|RAMP	peptidase domain containing associated with muscle regeneration 1	protein-coding	43.53	7.28	5.979395604	6.36E-16
chr11-1874	chr11	35964273	35965564	+	23.7	1291	promoter-TSS (NM_001304263)	promoter-TSS (NM_001304263)	-613	NM_174902	143458	Hs.745134	NM_174902	ENSG00000179241	LDLRAD3	LRAD3	low density lipoprotein receptor class A domain containing 3	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr11-1875	chr11	36003193	36004193	+	16	1000	"intron (NM_001304264, intron 1 of 5)"	MLT1C|LTR|ERVL-MaLR	-27955	NR_039769	100616311		NR_039769	ENSG00000263389	MIR3973	-	microRNA 3973	ncRNA	16	3.88	4.12371134	7.91E-05
chr11-1876	chr11	36048827	36049827	+	16.6	1000	"intron (NM_001304264, intron 1 of 5)"	"intron (NM_001304264, intron 1 of 5)"	17679	NR_039769	100616311		NR_039769	ENSG00000263389	MIR3973	-	microRNA 3973	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr11-1881	chr11	36272253	36273253	+	16.6	1000	Intergenic	MLT1F2|LTR|ERVL-MaLR	38246	NM_001101653	29099	Hs.279836	NM_014186	ENSG00000110442	COMMD9	HSPC166	COMM domain containing 9	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr11-1882	chr11	36318499	36320099	+	23.7	1600	"intron (NM_001160167, intron 1 of 8)"	LTR78|LTR|ERV1	1574	NM_001160167	79899	Hs.19987	NM_024841	ENSG00000135362	PRR5L	PROTOR2	proline rich 5 like	protein-coding	23.68	1.46	16.21917808	5.41E-16
chr11-1885	chr11	43988696	43989957	+	19.8	1261	Intergenic	L1M7|LINE|L1	25220	NM_001145033	387763	Hs.530443	NM_001145033	ENSG00000187479	C11orf96	AG2	chromosome 11 open reading frame 96	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr11-1886	chr11	44309920	44310920	+	16.6	1000	"intron (NM_021926, intron 1 of 3)"	"intron (NM_021926, intron 1 of 3)"	21296	NM_021926	60529	Hs.436055	NM_021926	ENSG00000052850	ALX4	CRS5|FND2	ALX homeobox 4	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr11-1892	chr11	44480118	44481118	+	16	1000	Intergenic	L2c|LINE|L2	-106523	NM_002231	3732	Hs.527778	NM_002231	ENSG00000085117	CD82	4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27	CD82 molecule	protein-coding	16	2.91	5.498281787	4.98E-06
chr11-1893	chr11	44671597	44673190	+	23.7	1593	Intergenic	L1M5|LINE|L1	85252	NM_001024844	3732	Hs.527778	NM_002231	ENSG00000085117	CD82	4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27	CD82 molecule	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr11-1895	chr11	44985787	44988161	+	35.2	2374	Intergenic	L2a|LINE|L2	-8479	NR_026681	221122	Hs.551656	NR_026681	ENSG00000254654	LOC221122	-	uncharacterized LOC221122	ncRNA	35.2	7.77	4.53024453	3.74E-10
chr11-1897	chr11	45266170	45267170	+	16.6	1000	"intron (NM_020826, intron 5 of 5)"	"intron (NM_020826, intron 5 of 5)"	41214	NM_020826	57586	Hs.436643	NM_020826	ENSG00000019505	SYT13	-	synaptotagmin 13	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr11-1899	chr11	45359881	45360881	+	16	1000	Intergenic	L2|LINE|L2	-16541	NR_120557	101928812	Hs.444059	NR_120557	ENSG00000254427	LOC101928812	-	uncharacterized LOC101928812	ncRNA	16	3.4	4.705882353	2.25E-05
chr11-1900	chr11	45367623	45370682	+	38.4	3059	Intergenic	Intergenic	-7770	NR_120557	101928812	Hs.444059	NR_120557	ENSG00000254427	LOC101928812	-	uncharacterized LOC101928812	ncRNA	38.4	8.74	4.393592677	5.52E-11
chr11-1904	chr11	45660044	45661338	+	17.3	1294	Intergenic	L1MEc|LINE|L1	26515	NM_003654	8534	Hs.104576	NM_003654	ENSG00000175264	CHST1	C6ST|GST-1|KS6ST|KSGal6ST|KSST	carbohydrate sulfotransferase 1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr11-1905	chr11	45707846	45708846	+	16.6	1000	Intergenic	Intergenic	4980	NR_106976	102465691		NR_106976	ENSG00000276639	MIR7154	hsa-mir-7154	microRNA 7154	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr11-1906	chr11	45711038	45712038	+	15.4	1000	Intergenic	LTR10C|LTR|ERV1	1788	NR_106976	102465691		NR_106976	ENSG00000276639	MIR7154	hsa-mir-7154	microRNA 7154	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr11-1907	chr11	46255500	46256500	+	15.4	1000	Intergenic	Intergenic	-43189	NM_052854	90993	Hs.405961	NM_052854	ENSG00000157613	CREB3L1	OASIS	cAMP responsive element binding protein 3 like 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-1913	chr11	56893168	56895264	+	31.4	2096	Intergenic	MLT1I|LTR|ERVL-MaLR	-55005	NM_001005210	219527	Hs.199853	NM_001005210	ENSG00000183908	LRRC55	-	leucine rich repeat containing 55	protein-coding	31.36	3.88	8.082474227	3.25E-14
chr11-1915	chr11	56962832	56964096	+	21.1	1264	Intergenic	L2a|LINE|L2	14243	NM_001005210	219527	Hs.199853	NM_001005210	ENSG00000183908	LRRC55	-	leucine rich repeat containing 55	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr11-1917	chr11	58957303	58958303	+	16.6	1000	"intron (NM_015177, intron 4 of 8)"	MIRb|SINE|MIR	17991	NM_015177	23220	Hs.523696	NM_015177	ENSG00000110042	DTX4	RNF155	deltex E3 ubiquitin ligase 4	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr11-1918	chr11	59211891	59212891	+	14.7	1000	TTS (NM_001004728)	TTS (NM_001004728)	1749	NM_001004728	219982	Hs.553649	NM_001004728	ENSG00000172320	OR5A1	OR11-249|OR5A1P|OST181	olfactory receptor family 5 subfamily A member 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-1919	chr11	59489932	59491204	+	17.3	1272	Intergenic	L2|LINE|L2	-9250	NM_001005324	390201	Hs.589001	NM_001005324	ENSG00000172289	OR10V1	OR11-256	olfactory receptor family 10 subfamily V member 1	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr11-1921	chr11	59628707	59629707	+	15.4	1000	"intron (NM_001062, intron 3 of 8)"	"intron (NM_001062, intron 3 of 8)"	4834	NM_001062	6947	Hs.2012	NM_001062	ENSG00000134827	TCN1	HC|TC-1|TC1|TCI	transcobalamin 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-1922	chr11	60161695	60162968	+	19.8	1273	"3' UTR (NM_206938, exon 6 of 6)"	"3' UTR (NM_206938, exon 6 of 6)"	-1156	NM_032597	84689	Hs.709736	NM_032597	ENSG00000166928	MS4A14	MS4A16|NYD-SP21	membrane spanning 4-domains A14	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr11-1926	chr11	60944035	60947172	+	38.4	3137	Intergenic	L1MC1|LINE|L1	-16687	NM_017966	55048	Hs.523715	NM_017966	ENSG00000167987	VPS37C	-	"VPS37C, ESCRT-I subunit"	protein-coding	38.4	7.77	4.942084942	3.34E-12
chr11-1928	chr11	61443965	61445906	+	30.1	1941	Intergenic	AluSg|SINE|Alu	-2970	NM_006133	747	Hs.241564	NM_006133	ENSG00000134780	DAGLA	C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR	diacylglycerol lipase alpha	protein-coding	30.08	2.91	10.33676976	7.13E-16
chr11-1929	chr11	61982943	61983943	+	16.6	1000	Intergenic	LTR5B|LTR|ERVK	7303	NM_002407	4246	Hs.97644	NM_002407	ENSG00000124939	SCGB2A1	LPHC|LPNC|MGB2|UGB3	secretoglobin family 2A member 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr11-1930	chr11	62210911	62211911	+	15.4	1000	"intron (NM_024060, intron 5 of 5)"	"intron (NM_024060, intron 5 of 5)"	24904	NM_003357	7356	Hs.523732	NM_003357	ENSG00000149021	SCGB1A1	CC10|CC16|CCPBP|CCSP|UGB|UP-1|UP1	secretoglobin family 1A member 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-1935	chr11	62720095	62723190	+	42.9	3095	Intergenic	Intergenic	30853	NM_153278	9356	Hs.369252	NM_004790	ENSG00000197901	SLC22A6	HOAT1|OAT1|PAHT|ROAT1	solute carrier family 22 member 6	protein-coding	42.89	10.68	4.015917603	9.13E-11
chr11-1940	chr11	63030519	63031519	+	16.6	1000	Intergenic	L1PA10|LINE|L1	-26400	NR_134874	387775	Hs.188982	NM_001039752	ENSG00000184999	SLC22A10	OAT5|hOAT5	solute carrier family 22 member 10	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-1952	chr11	66337211	66338211	+	15.4	1000	Intergenic	LTR8A|LTR|ERV1	-1664	NM_003793	8722	Hs.11590	NM_003793	ENSG00000174080	CTSF	CATSF|CLN13	cathepsin F	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-1954	chr11	66643333	66644333	+	16	1000	"intron (NM_001040716, intron 3 of 22)"	L1MC4|LINE|L1	18957	NM_024036	78999	Hs.209979	NM_024036	ENSG00000173621	LRFN4	FIGLER6|SALM3|SALM3.	leucine rich repeat and fibronectin type III domain containing 4	protein-coding	16	1.94	8.24742268	7.67E-08
chr11-1963	chr11	67238719	67239719	+	16	1000	Intergenic	L1ME5|LINE|L1	-2471	NM_025124	80194	Hs.288761	NM_025124	ENSG00000172663	TMEM134	-	transmembrane protein 134	protein-coding	16	0.49	32.65306122	1.26E-14
chr11-1964	chr11	67338150	67339150	+	16.6	1000	Intergenic	Intergenic	-12416	NM_000852	2950	Hs.523836	NM_000852	ENSG00000084207	GSTP1	DFN7|FAEES3|GST3|GSTP|HEL-S-22|PI	glutathione S-transferase pi 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr11-1969	chr11	68441193	68442193	+	16.6	1000	Intergenic	Intergenic	-10250	NM_015973	51083	Hs.278959	NM_015973	ENSG00000069482	GAL	ETL8|GAL-GMAP|GALN|GLNN|GMAP	galanin and GMAP prepropeptide	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-1972	chr11	69248953	69253495	+	58.2	4542	Intergenic	Intergenic	10785	NM_001319657	102724265	Hs.448669	NM_001319657	ENSG00000255980	LOC102724265	-	uncharacterized LOC102724265	protein-coding	58.25	5.82	10.00859107	3.99E-29
chr11-1976	chr11	69292337	69301376	+	132.5	9039	Intergenic	THE1B|LTR|ERVL-MaLR	-3473	NR_120543	101928292	Hs.736219	NR_120542		LINC01488	BRCAT8	long intergenic non-protein coding RNA 1488	ncRNA	132.5	22.33	5.933721451	2.46E-44
chr11-1978	chr11	69307240	69308240	+	16	1000	"non-coding (NR_120542, exon 6 of 6)"	"non-coding (NR_120542, exon 6 of 6)"	7411	NR_120545	101928292	Hs.736219	NR_120542		LINC01488	BRCAT8	long intergenic non-protein coding RNA 1488	ncRNA	16	1.94	8.24742268	7.67E-08
chr11-1979	chr11	69378845	69379845	+	15.4	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	-76528	NM_053056	595	Hs.523852	NM_053056	ENSG00000110092	CCND1	BCL1|D11S287E|PRAD1|U21B31	cyclin D1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-1980	chr11	69388405	69391901	+	42.9	3496	Intergenic	CT-rich|Low_complexity|Low_complexity	-65720	NM_053056	595	Hs.523852	NM_053056	ENSG00000110092	CCND1	BCL1|D11S287E|PRAD1|U21B31	cyclin D1	protein-coding	42.89	8.74	4.907322654	5.23E-13
chr11-1984	chr11	69461620	69463079	+	21.8	1459	"intron (NM_053056, intron 3 of 4)"	"intron (NM_053056, intron 3 of 4)"	6476	NM_053056	595	Hs.523852	NM_053056	ENSG00000110092	CCND1	BCL1|D11S287E|PRAD1|U21B31	cyclin D1	protein-coding	21.76	0.97	22.43298969	1.19E-17
chr11-1986	chr11	69467190	69468190	+	14.7	1000	"3' UTR (NM_053056, exon 5 of 5)"	"3' UTR (NM_053056, exon 5 of 5)"	11817	NM_053056	595	Hs.523852	NM_053056	ENSG00000110092	CCND1	BCL1|D11S287E|PRAD1|U21B31	cyclin D1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-1987	chr11	69496388	69497388	+	15.4	1000	Intergenic	L1ME4a|LINE|L1	-6723	NM_153451	220064	Hs.667996	NM_153451	ENSG00000149716	ORAOV1	TAOS1	oral cancer overexpressed 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-1988	chr11	69509886	69511282	+	21.1	1396	Intergenic	Intergenic	8522	NM_005117	9965	Hs.249200	NM_005117	ENSG00000162344	FGF19	-	fibroblast growth factor 19	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr11-1990	chr11	69647509	69650418	+	47.4	2909	Intergenic	Intergenic	-14771	NM_005247	2248	Hs.37092	NM_005247	ENSG00000186895	FGF3	HBGF-3|INT2	fibroblast growth factor 3	protein-coding	47.37	8.74	5.419908467	6.98E-16
chr11-1996	chr11	69917874	69921607	+	46.1	3733	"intron (NR_103835, intron 2 of 2)"	"intron (NR_103835, intron 2 of 2)"	1714	NR_103835	100009613	Hs.131238	NR_103835		ANO1-AS2	C11orf78|NCRNA00224	ANO1 antisense RNA 2 (head to head)	ncRNA	46.09	9.22	4.998915401	1.85E-14
chr11-20	chr11	101980258	101982615	+	46.7	2357	"5' UTR (NM_001130145, exon 1 of 9)"	"5' UTR (NM_001130145, exon 1 of 9)"	244	NM_001282101	10413	Hs.503692	NM_006106	ENSG00000137693	YAP1	COB1|YAP|YAP2|YAP65|YKI	Yes associated protein 1	protein-coding	46.73	2.43	19.23045267	4.26E-33
chr11-2005	chr11	70317480	70318480	+	16	1000	"non-coding (NR_110766, exon 9 of 9)"	"non-coding (NR_110766, exon 9 of 9)"	73368	NM_138565	2017	Hs.596164	NM_005231	ENSG00000085733	CTTN	EMS1	cortactin	protein-coding	16	0.97	16.49484536	3.54E-11
chr11-2006	chr11	70516440	70517440	+	16	1000	"intron (NM_012309, intron 12 of 22)"	"intron (NM_012309, intron 12 of 22)"	-8995	NR_110766	22941	Hs.268726	NM_012309	ENSG00000162105	SHANK2	AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3	SH3 and multiple ankyrin repeat domains 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr11-2008	chr11	70537418	70538418	+	16.6	1000	"intron (NM_012309, intron 12 of 22)"	AluSz|SINE|Alu	-29973	NR_110766	22941	Hs.268726	NM_012309	ENSG00000162105	SHANK2	AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3	SH3 and multiple ankyrin repeat domains 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-2009	chr11	70601572	70603611	+	35.8	2039	"intron (NM_012309, intron 11 of 22)"	"intron (NM_012309, intron 11 of 22)"	-94646	NR_110766	22941	Hs.268726	NM_012309	ENSG00000162105	SHANK2	AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3	SH3 and multiple ankyrin repeat domains 2	protein-coding	35.84	7.28	4.923076923	1.89E-11
chr11-201	chr11	17462827	17466858	+	64.6	4031	"exon (NM_000352, exon 9 of 39)"	"exon (NM_000352, exon 9 of 39)"	33550	NM_001287174	6833	Hs.54470	NM_000352	ENSG00000006071	ABCC8	ABC36|HHF1|HI|HRINS|MRP8|PHHI|SUR|SUR1|SUR1delta2|TNDM2	ATP binding cassette subfamily C member 8	protein-coding	64.65	12.62	5.122820919	1.04E-19
chr11-2010	chr11	70675945	70677252	+	19.8	1307	"intron (NM_012309, intron 8 of 22)"	"intron (NM_012309, intron 8 of 22)"	-32297	NR_073536	220070	Hs.326766	NM_145308	ENSG00000171671	SHANK2-AS3	C11orf76	SHANK2 antisense RNA 3	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr11-2012	chr11	70958539	70960445	+	34.6	1906	Intergenic	Intergenic	-23650	NM_012309	22941	Hs.268726	NM_012309	ENSG00000162105	SHANK2	AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3	SH3 and multiple ankyrin repeat domains 2	protein-coding	34.56	3.88	8.907216495	5.09E-17
chr11-2013	chr11	70976975	70977975	+	16.6	1000	Intergenic	Intergenic	-41633	NM_012309	22941	Hs.268726	NM_012309	ENSG00000162105	SHANK2	AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3	SH3 and multiple ankyrin repeat domains 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-2018	chr11	74440967	74441967	+	14.7	1000	"intron (NM_001278473, intron 1 of 10)"	"intron (NM_001278473, intron 1 of 10)"	963	NM_001278473	25884	Hs.432379	NM_015424	ENSG00000054938	CHRDL2	BNF1|CHL2	chordin like 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr11-2022	chr11	75478551	75480078	+	21.8	1527	promoter-TSS (NM_001253891)	promoter-TSS (NM_001253891)	378	NR_046090	283214	Hs.591972	NR_046090	ENSG00000247867	LOC283214	-	uncharacterized LOC283214	ncRNA	21.76	4.85	4.486597938	5.54E-07
chr11-2024	chr11	76934760	76935760	+	16	1000	"intron (NM_182833, intron 15 of 15)"	L1PA6|LINE|L1	63203	NM_182833	220032	Hs.249795	NM_182833	ENSG00000178795	GDPD4	GDE6	glycerophosphodiester phosphodiesterase domain containing 4	protein-coding	16	3.4	4.705882353	2.25E-05
chr11-2027	chr11	85435081	85436081	+	16	1000	"intron (NM_001289608, intron 7 of 18)"	"intron (NM_001289608, intron 7 of 18)"	-5188	NM_206930	54843	Hs.369520	NM_032379	ENSG00000137501	SYTL2	CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A	synaptotagmin like 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr11-2029	chr11	85450739	85452008	+	21.1	1269	"intron (NM_001289608, intron 3 of 18)"	"intron (NM_001289608, intron 3 of 18)"	17739	NM_001162951	54843	Hs.369520	NM_032379	ENSG00000137501	SYTL2	CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A	synaptotagmin like 2	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr11-203	chr11	27717993	27719255	+	23.7	1262	"intron (NR_033312, intron 8 of 8)"	"intron (NR_033312, intron 8 of 8)"	2590	NM_170734	627	Hs.502182	NM_001709	ENSG00000176697	BDNF	ANON2|BULN2	brain derived neurotrophic factor	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr11-2035	chr11	85511301	85512301	+	16	1000	"intron (NM_032943, intron 1 of 18)"	"intron (NM_032943, intron 1 of 18)"	10401	NM_032943	54843	Hs.369520	NM_032379	ENSG00000137501	SYTL2	CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A	synaptotagmin like 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr11-2039	chr11	87084232	87086415	+	35.2	2183	Intergenic	MIR3|SINE|MIR	336437	NR_033149	65084	Hs.188591	NM_022918	ENSG00000166575	TMEM135	PMP52	transmembrane protein 135	protein-coding	35.2	4.85	7.257731959	1.02E-14
chr11-2041	chr11	94999704	95001348	+	26.9	1644	Intergenic	Intergenic	-34821	NM_001271594	143686	Hs.120633	NM_144665	ENSG00000149212	SESN3	SEST3	sestrin 3	protein-coding	26.88	3.4	7.905882353	1.25E-12
chr11-2042	chr11	95089889	95090889	+	15.4	1000	Intergenic	L2c|LINE|L2	-124684	NM_001271594	143686	Hs.120633	NM_144665	ENSG00000149212	SESN3	SEST3	sestrin 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-2043	chr11	95160305	95161305	+	14.7	1000	Intergenic	AluSc|SINE|Alu	-195100	NM_001271594	143686	Hs.120633	NM_144665	ENSG00000149212	SESN3	SEST3	sestrin 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-2046	chr11	110638362	110639362	+	16.6	1000	Intergenic	Intergenic	-54950	NM_001258418	57569	Hs.6136	NM_020809	ENSG00000137727	ARHGAP20	RARHOGAP	Rho GTPase activating protein 20	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr11-2047	chr11	111083825	111084825	+	15.4	1000	Intergenic	L1M1|LINE|L1	-42382	NM_198498	341032	Hs.298685	NM_198498	ENSG00000150750	C11orf53	-	chromosome 11 open reading frame 53	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr11-2048	chr11	111091312	111092312	+	15.4	1000	Intergenic	Intergenic	-34895	NM_198498	341032	Hs.298685	NM_198498	ENSG00000150750	C11orf53	-	chromosome 11 open reading frame 53	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-2049	chr11	111295773	111296773	+	15.4	1000	Intergenic	L2c|LINE|L2	-7362	NR_046085	100132078	Hs.672662	NR_046085	ENSG00000255428	LOC100132078	-	uncharacterized LOC100132078	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr11-2050	chr11	112363907	112364907	+	16.6	1000	"intron (NR_120559, intron 2 of 2)"	MSTD|LTR|ERVL-MaLR	9339	NR_120560	101928823	Hs.126118	NR_120559	ENSG00000254968	LOC101928823	-	uncharacterized LOC101928823	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr11-2051	chr11	112483233	112484233	+	16	1000	Intergenic	Intergenic	-57208	NR_104155	387810	Hs.512255	NR_104155	ENSG00000255484	LOC387810	-	uncharacterized LOC387810	ncRNA	16	3.88	4.12371134	7.91E-05
chr11-2053	chr11	113055747	113057091	+	22.4	1344	"intron (NM_001076682, intron 2 of 19)"	"intron (NM_001076682, intron 2 of 19)"	88204	NR_034101	100288346	Hs.661826	NR_034101	ENSG00000227487	NCAM1-AS1	-	NCAM1 antisense RNA1	ncRNA	22.4	2.91	7.697594502	3.87E-10
chr11-2055	chr11	113871088	113872547	+	22.4	1459	Intergenic	Intergenic	23595	NM_001161772	3359	Hs.413899	NM_000869	ENSG00000166736	HTR3A	5-HT-3|5-HT3A|5-HT3R|5HT3R|HTR3	5-hydroxytryptamine receptor 3A	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr11-2057	chr11	115167352	115168352	+	14.7	1000	"intron (NM_001098517, intron 1 of 8)"	"intron (NM_001098517, intron 1 of 8)"	-36444	NR_135108	105369509	Hs.736064	NR_135108		LOC105369509	-	uncharacterized LOC105369509	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr11-2066	chr11	116452265	116456570	+	62.1	4305	Intergenic	Intergenic	-55722	NR_135069	101929011	Hs.733911	NR_135069	ENSG00000237937	LOC101929011	-	uncharacterized LOC101929011	ncRNA	62.09	8.74	7.104118993	1.11E-24
chr11-2067	chr11	116463616	116464616	+	16	1000	Intergenic	Intergenic	-46023	NR_135069	101929011	Hs.733911	NR_135069	ENSG00000237937	LOC101929011	-	uncharacterized LOC101929011	ncRNA	16	3.88	4.12371134	7.91E-05
chr11-2070	chr11	116469618	116470618	+	16.6	1000	Intergenic	MLT1E3|LTR|ERVL-MaLR	-40021	NR_135069	101929011	Hs.733911	NR_135069	ENSG00000237937	LOC101929011	-	uncharacterized LOC101929011	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr11-2071	chr11	116661304	116662304	+	16.6	1000	"intron (NM_001166598, intron 3 of 3)"	"intron (NM_001166598, intron 3 of 3)"	1332	NM_001166598	116519	Hs.283923	NM_052968	ENSG00000110243	APOA5	APOAV|RAP3	apolipoprotein A5	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr11-2075	chr11	117452245	117454918	+	37.1	2673	"intron (NM_020693, intron 3 of 32)"	"intron (NM_020693, intron 3 of 32)"	214395	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	37.12	6.31	5.882725832	1.20E-13
chr11-2077	chr11	117457157	117459515	+	35.8	2358	"intron (NM_020693, intron 3 of 32)"	"intron (NM_020693, intron 3 of 32)"	209640	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	35.84	5.34	6.711610487	1.37E-14
chr11-2078	chr11	117511004	117512004	+	16.6	1000	"intron (NM_020693, intron 3 of 32)"	"intron (NM_020693, intron 3 of 32)"	156472	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr11-2079	chr11	117525955	117526955	+	16.6	1000	"intron (NM_020693, intron 3 of 32)"	"intron (NM_020693, intron 3 of 32)"	141521	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr11-2091	chr11	117732407	117733914	+	23.7	1507	"intron (NM_001164837, intron 1 of 8)"	"intron (NM_001164837, intron 1 of 8)"	14586	NM_001204268	100533181	Hs.744850	NM_001204268	ENSG00000255245	FXYD6-FXYD2	-	FXYD6-FXYD2 readthrough	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr11-2096	chr11	117882757	117883757	+	16	1000	Intergenic	Intergenic	26151	NM_001558	3587	Hs.504035	NM_001558	ENSG00000110324	IL10RA	CD210|CD210a|CDW210A|HIL-10R|IL-10R1|IL10R	interleukin 10 receptor subunit alpha	protein-coding	16	3.4	4.705882353	2.25E-05
chr11-2097	chr11	117886432	117887432	+	15.4	1000	"intron (NR_038318, intron 3 of 3)"	"intron (NR_038318, intron 3 of 3)"	29826	NM_001558	3587	Hs.504035	NM_001558	ENSG00000110324	IL10RA	CD210|CD210a|CDW210A|HIL-10R|IL-10R1|IL10R	interleukin 10 receptor subunit alpha	protein-coding	15.36	0	15.82260557	1.26E-14
chr11-2098	chr11	117899485	117900485	+	15.4	1000	"intron (NR_038318, intron 3 of 3)"	AluSz|SINE|Alu	42879	NM_001558	3587	Hs.504035	NM_001558	ENSG00000110324	IL10RA	CD210|CD210a|CDW210A|HIL-10R|IL-10R1|IL10R	interleukin 10 receptor subunit alpha	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr11-2103	chr11	117978225	117979870	+	25	1645	"intron (NM_001083947, intron 6 of 12)"	"intron (NM_001083947, intron 6 of 12)"	-21539	NR_038318	100526771	Hs.627426	NR_038318	ENSG00000255274	TMPRSS4-AS1	-	TMPRSS4 antisense RNA 1	ncRNA	24.96	0.97	25.73195876	2.01E-20
chr11-2108	chr11	118491488	118493165	+	32.6	1677	"intron (NM_001144758, intron 4 of 22)"	"intron (NM_001144758, intron 4 of 22)"	14020	NM_001144758	23187	Hs.504062	NM_015157	ENSG00000019144	PHLDB1	LL5A	pleckstrin homology like domain family B member 1	protein-coding	32.64	3.88	8.412371134	3.92E-15
chr11-2109	chr11	118551611	118552984	+	18.6	1373	Intergenic	AluJr|SINE|Alu	-1916	NM_007180	11181	Hs.129712	NM_007180	ENSG00000118094	TREH	TRE|TREA	trehalase	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr11-2118	chr11	119398884	119399884	+	16	1000	Intergenic	L2c|LINE|L2	-103689	NM_001311162	7070	Hs.644697	NM_006288	ENSG00000154096	THY1	CD90|CDw90	Thy-1 cell surface antigen	protein-coding	16	0	16.4818808	1.26E-14
chr11-2119	chr11	119476061	119477696	+	24.3	1635	Intergenic	AluJr|SINE|Alu	122557	NM_203286	5818	Hs.334846	NM_002855	ENSG00000110400	NECTIN1	CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1	nectin cell adhesion molecule 1	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr11-2121	chr11	119495844	119496844	+	16	1000	Intergenic	MIRc|SINE|MIR	103091	NM_203286	5818	Hs.334846	NM_002855	ENSG00000110400	NECTIN1	CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1	nectin cell adhesion molecule 1	protein-coding	16	0	16.4818808	1.26E-14
chr11-2125	chr11	119633147	119634147	+	14.7	1000	Intergenic	Intergenic	33354	NR_120587	102724301	Hs.637640	NR_120587	ENSG00000254854	LOC102724301	-	uncharacterized LOC102724301	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr11-2127	chr11	119660574	119663302	+	39	2728	Intergenic	Intergenic	61645	NR_120587	102724301	Hs.637640	NR_120587	ENSG00000254854	LOC102724301	-	uncharacterized LOC102724301	ncRNA	39.04	9.22	4.234273319	1.94E-10
chr11-2135	chr11	119963856	119965422	+	22.4	1566	Intergenic	MER63C|DNA|hAT-Blackjack	34982	NM_001330382	23650	Hs.504115	NM_012101	ENSG00000137699	TRIM29	ATDC	tripartite motif containing 29	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr11-2137	chr11	119984018	119985018	+	16	1000	"intron (NM_001330382, intron 8 of 8)"	"intron (NM_001330382, intron 8 of 8)"	15103	NM_001330382	23650	Hs.504115	NM_012101	ENSG00000137699	TRIM29	ATDC	tripartite motif containing 29	protein-coding	16	1.46	10.95890411	3.44E-09
chr11-2139	chr11	120014823	120017541	+	37.1	2718	Intergenic	Intergenic	-7319	NM_012101	23650	Hs.504115	NM_012101	ENSG00000137699	TRIM29	ATDC	tripartite motif containing 29	protein-coding	37.12	9.22	4.026030369	8.17E-10
chr11-2141	chr11	120044931	120045931	+	16.6	1000	Intergenic	L1MC4a|LINE|L1	-36316	NM_178507	220323	Hs.445081	NM_178507	ENSG00000184232	OAF	NS5ATP13TP2	out at first homolog	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr11-2144	chr11	120112117	120113117	+	16.6	1000	"intron (NM_014352, intron 1 of 12)"	"intron (NM_014352, intron 1 of 12)"	1714	NM_014352	25833	Hs.227115	NM_014352	ENSG00000137709	POU2F3	Epoc-1|OCT-11|OCT11|OTF-11|PLA-1|PLA1|Skn-1a	POU class 2 homeobox 3	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr11-2146	chr11	120418844	120419844	+	16.6	1000	"intron (NM_014619, intron 1 of 20)"	"intron (NM_014619, intron 1 of 20)"	-15801	NM_001282470	2900	Hs.538738	NM_014619	ENSG00000149403	GRIK4	EAA1|GRIK|GluK4|KA1	glutamate ionotropic receptor kainate type subunit 4	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-2149	chr11	120735221	120736599	+	20.5	1378	"intron (NM_001282470, intron 8 of 19)"	"intron (NM_001282470, intron 8 of 19)"	29596	NR_132790	101929227	Hs.627156	NR_132790	ENSG00000250493	LOC101929227	-	uncharacterized LOC101929227	ncRNA	20.48	3.4	6.023529412	2.41E-08
chr11-2156	chr11	122189207	122190207	+	15.4	1000	"intron (NR_137179, intron 1 of 4)"	"intron (NR_137179, intron 1 of 4)"	-9512	NR_137180	399959	Hs.44098	NR_024430		MIR100HG	AGD1|linc-NeD125|lncRNA-N2	mir-100-let-7a-2 cluster host gene	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr11-2157	chr11	122730962	122733723	+	42.2	2761	promoter-TSS (NM_001304782)	promoter-TSS (NM_001304782)	-677	NM_001304782	56253	Hs.159523	NM_019604	ENSG00000109943	CRTAM	CD355	cytotoxic and regulatory T-cell molecule	protein-coding	42.25	7.28	5.803571429	3.82E-15
chr11-2163	chr11	123553621	123554989	+	22.4	1368	Intergenic	Intergenic	-28990	NM_001040151	55800	Hs.4865	NM_018400	ENSG00000166257	SCN3B	ATFB16|BRGDA7|HSA243396|SCNB3	sodium voltage-gated channel beta subunit 3	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr11-2169	chr11	124626222	124632992	+	109.5	6770	"intron (NR_120577, intron 1 of 1)"	"intron (NR_120577, intron 1 of 1)"	577	NR_120577	101929340	Hs.173840	NR_120577	ENSG00000250073	LOC101929340	-	uncharacterized LOC101929340	ncRNA	109.45	17.96	6.094097996	1.08E-37
chr11-2171	chr11	124708188	124710147	+	35.8	1959	Intergenic	Intergenic	-26138	NM_022370	64221	Hs.435621	NM_022370	ENSG00000154134	ROBO3	HGPPS|HGPS|RBIG1|RIG1	roundabout guidance receptor 3	protein-coding	35.84	3.88	9.237113402	5.49E-18
chr11-2173	chr11	124757180	124758180	+	16.6	1000	"exon (NM_001301088, exon 13 of 18)"	"exon (NM_001301088, exon 13 of 18)"	10151	NM_019055	54538	Hs.524121	NM_019055	ENSG00000154133	ROBO4	ECSM4|MRB	roundabout guidance receptor 4	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr11-2174	chr11	124932970	124933970	+	16	1000	"intron (NM_198277, intron 1 of 18)"	CpG	457	NM_198277	219855	Hs.352661	NM_198277	ENSG00000134955	SLC37A2	pp11662	solute carrier family 37 member 2	protein-coding	16	0	16.4818808	1.26E-14
chr11-2175	chr11	125014078	125015490	+	22.4	1412	Intergenic	MLT1B|LTR|ERVL-MaLR	19721	NR_125759	103695364	Hs.576940	NR_125759	ENSG00000254880	PKNOX2-AS1	-	PKNOX2 antisense RNA 1 (head to head)	ncRNA	22.4	0.97	23.09278351	1.19E-17
chr11-2179	chr11	125091327	125092327	+	16.6	1000	"intron (NM_022062, intron 1 of 12)"	"intron (NM_022062, intron 1 of 12)"	57268	NM_022062	63876	Hs.278564	NM_022062	ENSG00000165495	PKNOX2	PREP2	PBX/knotted 1 homeobox 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-2183	chr11	125222334	125223334	+	15.4	1000	"intron (NM_022062, intron 4 of 12)"	"intron (NM_022062, intron 4 of 12)"	-142276	NM_001301851	403312	Hs.450611	NM_203452		LOC403312	-	putative uncharacterized protein MGC39545	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-2184	chr11	125247777	125248777	+	16.6	1000	"intron (NM_022062, intron 5 of 12)"	"intron (NM_022062, intron 5 of 12)"	-116833	NM_001301851	403312	Hs.450611	NM_203452		LOC403312	-	putative uncharacterized protein MGC39545	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr11-2186	chr11	125323564	125324564	+	15.4	1000	"exon (NM_005103, exon 7 of 10)"	"exon (NM_005103, exon 7 of 10)"	-41046	NM_001301851	403312	Hs.450611	NM_203452		LOC403312	-	putative uncharacterized protein MGC39545	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr11-2188	chr11	125614784	125615784	+	16.6	1000	promoter-TSS (NM_138294)	promoter-TSS (NM_138294)	-904	NM_138294	160065	Hs.148565	NM_138294	ENSG00000171053	PATE1	PATE	prostate and testis expressed 1	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr11-2189	chr11	126357192	126358192	+	16	1000	"intron (NM_032531, intron 4 of 16)"	"intron (NM_032531, intron 4 of 16)"	81615	NM_001254759	6484	Hs.591947	NM_006278	ENSG00000110080	ST3GAL4	CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST3GalIV|STZ	"ST3 beta-galactoside alpha-2,3-sialyltransferase 4"	protein-coding	16	1.94	8.24742268	7.67E-08
chr11-2191	chr11	126360553	126361553	+	16.6	1000	"intron (NM_032531, intron 4 of 16)"	MIRc|SINE|MIR	84976	NM_001254759	6484	Hs.591947	NM_006278	ENSG00000110080	ST3GAL4	CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST3GalIV|STZ	"ST3 beta-galactoside alpha-2,3-sialyltransferase 4"	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-2192	chr11	126387932	126388932	+	15.4	1000	"intron (NM_032531, intron 4 of 16)"	"intron (NM_032531, intron 4 of 16)"	112355	NM_001254759	6484	Hs.591947	NM_006278	ENSG00000110080	ST3GAL4	CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST3GalIV|STZ	"ST3 beta-galactoside alpha-2,3-sialyltransferase 4"	protein-coding	15.36	0	15.82260557	1.26E-14
chr11-2194	chr11	126458946	126459946	+	16.6	1000	"intron (NM_032531, intron 1 of 16)"	MIRb|SINE|MIR	-63227	NR_120532	101929427	Hs.600341	NR_120532	ENSG00000254607	LOC101929427	-	uncharacterized LOC101929427	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr11-2195	chr11	126480357	126481357	+	16.6	1000	"intron (NM_032531, intron 1 of 16)"	"intron (NM_032531, intron 1 of 16)"	-41816	NR_120532	101929427	Hs.600341	NR_120532	ENSG00000254607	LOC101929427	-	uncharacterized LOC101929427	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr11-2196	chr11	126679044	126680044	+	17.3	1000	"intron (NM_032531, intron 1 of 16)"	"intron (NM_032531, intron 1 of 16)"	-131098	NR_046986	100874251	Hs.319053	NR_046986	ENSG00000254960	KIRREL3-AS2	-	KIRREL3 antisense RNA 2	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr11-220	chr11	94977252	94978252	+	21.1	1000	Intergenic	Intergenic	-12047	NM_001271594	143686	Hs.120633	NM_144665	ENSG00000149212	SESN3	SEST3	sestrin 3	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr11-2200	chr11	126850321	126851321	+	16.6	1000	"intron (NM_032531, intron 1 of 16)"	"intron (NM_032531, intron 1 of 16)"	7617	NR_036126	100422918		NR_036126	ENSG00000266215	MIR3167	-	microRNA 3167	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr11-2202	chr11	126889483	126890483	+	15.4	1000	Intergenic	Intergenic	17178	NR_040078	283165	Hs.730461	NM_173579	ENSG00000218109	KIRREL3-AS3	NCRNA00288|PRR10	KIRREL3 antisense RNA 3	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr11-2204	chr11	127644862	127645862	+	15.4	1000	Intergenic	Intergenic	504397	NR_120580	101929497	Hs.737442	NR_120580	ENSG00000273409	LOC101929497	-	uncharacterized LOC101929497	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr11-2206	chr11	127953814	127954814	+	16.6	1000	Intergenic	L1PA14|LINE|L1	437891	NM_005238	2113	Hs.369438	NM_005238	ENSG00000134954	ETS1	ETS-1|EWSR2|c-ets-1|p54	"ETS proto-oncogene 1, transcription factor"	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-2209	chr11	129231363	129232852	+	22.4	1489	Intergenic	AluSq2|SINE|Alu	-13774	NM_003658	8538	Hs.591944	NM_003658	ENSG00000043039	BARX2	-	BARX homeobox 2	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr11-2210	chr11	129245867	129246867	+	16	1000	"intron (NM_003658, intron 1 of 3)"	CpG	486	NM_003658	8538	Hs.591944	NM_003658	ENSG00000043039	BARX2	-	BARX homeobox 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr11-2215	chr11	130038620	130039620	+	14.7	1000	"intron (NM_021978, intron 1 of 18)"	AluSx|SINE|Alu	9438	NM_021978	6768	Hs.504315	NM_021978	ENSG00000149418	ST14	ARCI11|HAI|MT-SP1|MTSP1|PRSS14|SNC19|TADG15|TMPRSS14	suppression of tumorigenicity 14	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-2218	chr11	130332292	130333292	+	16.6	1000	"intron (NM_139055, intron 4 of 7)"	"intron (NM_139055, intron 4 of 7)"	13923	NM_139055	170689	Hs.534221	NM_139055	ENSG00000166106	ADAMTS15	-	ADAM metallopeptidase with thrombospondin type 1 motif 15	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr11-222	chr11	104217357	104218631	+	23.7	1274	Intergenic	Tigger13a|DNA|TcMar-Tigger	94675	NR_106987	102465752		NR_106987	ENSG00000280773	MIR7641-1	hsa-mir-7641-1	microRNA 7641-1	ncRNA	23.68	4.85	4.882474227	1.15E-07
chr11-2220	chr11	131115482	131116482	+	15.4	1000	Intergenic	Intergenic	-124389	NM_001048209	50863	Hs.504352	NM_016522	ENSG00000182667	NTM	HNT|IGLON2|NTRI	neurotrimin	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-2221	chr11	131322075	131323075	+	16.6	1000	"intron (NM_001048209, intron 1 of 7)"	MIRc|SINE|MIR	82204	NM_001048209	50863	Hs.504352	NM_016522	ENSG00000182667	NTM	HNT|IGLON2|NTRI	neurotrimin	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr11-2225	chr11	132864181	132865181	+	16.6	1000	"intron (NM_001012393, intron 1 of 7)"	L2a|LINE|L2	-51018	NM_001319105	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr11-2227	chr11	133021968	133022968	+	15.4	1000	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	-208805	NM_001319105	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-2229	chr11	133096640	133097640	+	16.6	1000	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	-283477	NM_001319105	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr11-223	chr11	113930519	113933282	+	46.1	2763	"intron (NM_001018011, intron 1 of 6)"	CpG	612	NM_001018011	7704	Hs.591945	NM_006006	ENSG00000109906	ZBTB16	PLZF|ZNF145	zinc finger and BTB domain containing 16	protein-coding	46.09	3.4	13.55588235	3.72E-28
chr11-2230	chr11	133143893	133144893	+	16.6	1000	"intron (NM_001012393, intron 1 of 7)"	MLT1C|LTR|ERVL-MaLR	258114	NM_001012393	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr11-2231	chr11	133207921	133210003	+	32.6	2082	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	193545	NM_001012393	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	32.64	6.8	4.8	5.32E-10
chr11-2234	chr11	133335575	133336575	+	16.6	1000	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	66432	NM_001012393	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr11-2238	chr11	133548405	133549405	+	16	1000	Intergenic	Intergenic	131366	NR_120444	646522	Hs.560000	NR_120444	ENSG00000255258	LOC646522	-	uncharacterized LOC646522	ncRNA	16	3.4	4.705882353	2.25E-05
chr11-2245	chr11	134294021	134295021	+	16	1000	Intergenic	Intergenic	-11855	NR_033852	283177	Hs.504390	NR_033852		LOC283177	-	uncharacterized LOC283177	ncRNA	16	2.43	6.58436214	7.90E-07
chr11-2247	chr11	134442134	134443134	+	15.4	1000	Intergenic	Intergenic	136258	NR_033852	283177	Hs.504390	NR_033852		LOC283177	-	uncharacterized LOC283177	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr11-2248	chr11	134631936	134632936	+	16.6	1000	Intergenic	CpG	-222810	NR_135050	100507548	Hs.639995	NR_135050		LOC100507548	-	uncharacterized LOC100507548	ncRNA	16.64	0.49	33.95918367	3.68E-16
chr11-2250	chr11	134792778	134793778	+	16	1000	Intergenic	Intergenic	-61968	NR_135050	100507548	Hs.639995	NR_135050		LOC100507548	-	uncharacterized LOC100507548	ncRNA	16	2.91	5.498281787	4.98E-06
chr11-2254	chr11	134842152	134843784	+	25.6	1632	Intergenic	Intergenic	-12278	NR_135050	100507548	Hs.639995	NR_135050		LOC100507548	-	uncharacterized LOC100507548	ncRNA	25.6	2.91	8.797250859	6.53E-13
chr11-226	chr11	117624435	117625952	+	25.6	1517	"intron (NM_020693, intron 3 of 32)"	"intron (NM_020693, intron 3 of 32)"	42783	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	25.6	4.85	5.278350515	4.26E-09
chr11-2260	chr11	1234563	1235563	+	14.7	1000	Intergenic	L1M4c|LINE|L1	-9232	NM_002458	727897	Hs.523395	NM_002458	ENSG00000117983	MUC5B	MG1|MUC-5B|MUC5|MUC9	"mucin 5B, oligomeric mucus/gel-forming"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-2261	chr11	1380461	1381461	+	16	1000	Intergenic	Intergenic	-30168	NM_003957	9024	Hs.170819	NM_003957	ENSG00000174672	BRSK2	C11orf7|PEN11B|SAD1|SADA|STK29	BR serine/threonine kinase 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr11-2263	chr11	1680785	1682082	+	18.6	1297	Intergenic	L2|LINE|L2	-5396	NR_026643	387742	Hs.567908	NM_001014374	ENSG00000205866	FAM99A	-	family with sequence similarity 99 member A (non-protein coding)	ncRNA	18.56	2.43	7.637860082	1.53E-08
chr11-2264	chr11	1710697	1713092	+	41	2395	Intergenic	Intergenic	-5035	NR_026642	100132464	Hs.117797	NR_026642	ENSG00000205865	FAM99B	-	family with sequence similarity 99 member B (non-protein coding)	ncRNA	40.97	2.91	14.0790378	1.11E-25
chr11-2266	chr11	1835269	1836790	+	23	1521	Intergenic	Intergenic	-19511	NM_001290334	90019	Hs.161031	NM_138567	ENSG00000149043	SYT8	-	synaptotagmin 8	protein-coding	23.04	5.34	4.314606742	4.49E-07
chr11-2280	chr11	2184635	2187344	+	35.8	2709	"intron (NM_199293, intron 13 of 13)"	"intron (NM_199293, intron 13 of 13)"	-3550	NR_003512	723961	Hs.272259	NM_001042376	ENSG00000129965	INS-IGF2	INSIGF	INS-IGF2 readthrough	protein-coding	35.84	5.82	6.158075601	1.09E-13
chr11-2283	chr11	2383722	2389932	+	77.4	6210	"intron (NR_108080, intron 1 of 2)"	"intron (NR_108080, intron 1 of 2)"	-10580	NM_001297649	975	Hs.54457	NM_004356	ENSG00000110651	CD81	CVID6|S5.7|TAPA1|TSPAN28	CD81 molecule	protein-coding	77.45	16.5	4.693939394	1.59E-21
chr11-2284	chr11	2445024	2446024	+	15.4	1000	Intergenic	Intergenic	-1249	NM_014555	29850	Hs.272287	NM_014555	ENSG00000070985	TRPM5	LTRPC5|MTR1	transient receptor potential cation channel subfamily M member 5	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-2285	chr11	2469307	2470307	+	16	1000	"intron (NM_000218, intron 1 of 15)"	"intron (NM_000218, intron 1 of 15)"	3586	NM_000218	3784	Hs.95162	NM_000218	ENSG00000053918	KCNQ1	ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS	potassium voltage-gated channel subfamily Q member 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr11-2290	chr11	2593080	2597471	+	65.3	4391	"intron (NM_000218, intron 6 of 15)"	"intron (NM_000218, intron 6 of 15)"	112591	NM_181798	3784	Hs.95162	NM_000218	ENSG00000053918	KCNQ1	ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS	potassium voltage-gated channel subfamily Q member 1	protein-coding	65.29	4.85	13.46185567	5.19E-39
chr11-2291	chr11	2677968	2678968	+	15.4	1000	"non-coding (NR_002728, exon 1 of 1)"	"non-coding (NR_002728, exon 1 of 1)"	42760	NR_002728	10984	Hs.604823	NR_002728	ENSG00000269821	KCNQ1OT1	KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012	KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr11-2293	chr11	2723355	2724355	+	14.7	1000	"intron (NM_000218, intron 11 of 15)"	"intron (NM_000218, intron 11 of 15)"	-2627	NR_002728	10984	Hs.604823	NR_002728	ENSG00000269821	KCNQ1OT1	KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012	KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr11-2294	chr11	2730518	2731518	+	14.1	1000	"intron (NM_000218, intron 11 of 15)"	L1MB7|LINE|L1	-9790	NR_002728	10984	Hs.604823	NR_002728	ENSG00000269821	KCNQ1OT1	KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012	KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)	ncRNA	14.08	0.49	28.73469388	3.99E-13
chr11-2295	chr11	2764084	2765084	+	15.4	1000	"intron (NM_000218, intron 11 of 15)"	"intron (NM_000218, intron 11 of 15)"	-43356	NR_002728	10984	Hs.604823	NR_002728	ENSG00000269821	KCNQ1OT1	KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012	KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr11-2299	chr11	2815261	2816703	+	19.2	1442	"intron (NM_000218, intron 15 of 15)"	"intron (NM_000218, intron 15 of 15)"	66817	NR_130721	338653	Hs.639425	NR_130721	ENSG00000229414	KCNQ1-AS1	-	KCNQ1 antisense RNA 1	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr11-2305	chr11	3601737	3602737	+	14.7	1000	Intergenic	CpG	-9020	NR_126335	101927708	Hs.577316	NR_126335	ENSG00000255367	LOC101927708	-	uncharacterized LOC101927708	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr11-2306	chr11	4492754	4493754	+	14.7	1000	Intergenic	LTR16E2|LTR|ERVL	-16855	NM_001005171	390036	Hs.553726	NM_001005171	ENSG00000196778	OR52K1	OR11-8	olfactory receptor family 52 subfamily K member 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-2311	chr11	6344516	6347629	+	51.2	3113	Intergenic	AluSp|SINE|Alu	-4332	NM_145040	112464	Hs.434044	NM_145040	ENSG00000170955	PRKCDBP	CAVIN3|HSRBC|SRBC|cavin-3	protein kinase C delta binding protein	protein-coding	51.21	12.13	4.221764221	1.43E-13
chr11-2316	chr11	7507936	7508936	+	15.4	1000	"intron (NM_198474, intron 1 of 2)"	"intron (NM_198474, intron 1 of 2)"	1836	NM_198474	283298	Hs.503500	NM_198474	ENSG00000183801	OLFML1	UNQ564	olfactomedin like 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-2318	chr11	8038702	8041241	+	34.6	2539	Intergenic	(CACCC)n|Simple_repeat|Simple_repeat	-1915	NR_125366	103581031	Hs.249366	NR_125366	ENSG00000255420	CASC23	LINC01464	cancer susceptibility candidate 23 (non-protein coding)	ncRNA	34.56	2.91	11.87628866	4.47E-20
chr11-2320	chr11	8105526	8106816	+	17.9	1290	"intron (NM_177972, intron 1 of 11)"	L2c|LINE|L2	3262	NM_177972	7275	Hs.568986	NM_003320	ENSG00000166402	TUB	RDOB|rd5	tubby bipartite transcription factor	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr11-2322	chr11	8766511	8770811	+	56.3	4300	"intron (NM_005418, intron 5 of 22)"	"intron (NM_005418, intron 5 of 22)"	-21664	NR_120590	102724784	Hs.613276	NR_120590		LOC102724784	-	uncharacterized LOC102724784	ncRNA	56.33	9.22	6.109544469	1.80E-20
chr11-2327	chr11	9056850	9057850	+	15.4	1000	"intron (NM_001330199, intron 15 of 21)"	"intron (NM_001330199, intron 15 of 21)"	-31754	NM_020645	56675	Hs.523467	NM_020645	ENSG00000175352	NRIP3	C11orf14|NY-SAR-105	nuclear receptor interacting protein 3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-2329	chr11	9096875	9097875	+	14.1	1000	"intron (NM_001330199, intron 3 of 21)"	"intron (NM_001330199, intron 3 of 21)"	14551	NR_049874	100847015		NR_049874	ENSG00000264984	MIR5691	-	microRNA 5691	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr11-2331	chr11	9183457	9184457	+	15.4	1000	"intron (NM_001243254, intron 11 of 22)"	AluSp|SINE|Alu	68047	NR_027713	283102	Hs.689472	NR_027713	ENSG00000213538	KRT8P41	-	keratin 8 pseudogene 41	pseudo	15.36	1.46	10.52054795	3.44E-09
chr11-2333	chr11	9284047	9288436	+	53.8	4389	"intron (NM_001243254, intron 1 of 22)"	"intron (NM_001243254, intron 1 of 22)"	632	NM_001243254	23258	Hs.501857	NM_015213	ENSG00000184014	DENND5A	RAB6IP1	DENN domain containing 5A	protein-coding	53.77	9.22	5.831887202	6.62E-19
chr11-2336	chr11	10694918	10696495	+	27.5	1577	"intron (NM_130385, intron 1 of 20)"	L2b|LINE|L2	19415	NM_001100167	10335	Hs.501898	NM_130385	ENSG00000072952	MRVI1	IRAG|JAW1L	murine retrovirus integration site 1 homolog	protein-coding	27.52	3.4	8.094117647	1.25E-12
chr11-234	chr11	129372631	129373631	+	21.8	1000	Intergenic	Intergenic	114033	NR_120582	101929557	Hs.385785	NR_120582	ENSG00000281097	LINC01395	-	long intergenic non-protein coding RNA 1395	ncRNA	21.76	2.43	8.95473251	2.49E-11
chr11-2343	chr11	11203053	11204053	+	15.4	1000	Intergenic	Intergenic	171351	NM_001256686	283106	Hs.654675	NM_001256686	ENSG00000254598	CSNK2A3	CSNK2A1P	casein kinase 2 alpha 3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-2348	chr11	11545176	11546176	+	15.4	1000	"intron (NM_198516, intron 1 of 10)"	MLT1N2|LTR|ERVL-MaLR	97885	NM_198516	374378	Hs.655152	NM_198516	ENSG00000110328	GALNT18	GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18	polypeptide N-acetylgalactosaminyltransferase 18	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr11-2349	chr11	11566067	11567067	+	14.1	1000	"intron (NM_198516, intron 1 of 10)"	"intron (NM_198516, intron 1 of 10)"	76994	NM_198516	374378	Hs.655152	NM_198516	ENSG00000110328	GALNT18	GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18	polypeptide N-acetylgalactosaminyltransferase 18	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr11-2350	chr11	11603981	11604981	+	15.4	1000	"intron (NM_198516, intron 1 of 10)"	"intron (NM_198516, intron 1 of 10)"	39080	NM_198516	374378	Hs.655152	NM_198516	ENSG00000110328	GALNT18	GALNACT18|GALNT15|GALNTL4|GalNAc-T15|GalNAc-T18	polypeptide N-acetylgalactosaminyltransferase 18	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-2352	chr11	11786264	11787264	+	16	1000	Intergenic	AluY|SINE|Alu	18005	NR_107037	102465870		NR_107037	ENSG00000278529	MIR8070	hsa-mir-8070	microRNA 8070	ncRNA	16	1.94	8.24742268	7.67E-08
chr11-2353	chr11	11799394	11802872	+	43.5	3478	Intergenic	Intergenic	3636	NR_107037	102465870		NR_107037	ENSG00000278529	MIR8070	hsa-mir-8070	microRNA 8070	ncRNA	43.53	7.77	5.602316602	3.96E-15
chr11-2355	chr11	12015905	12016905	+	14.7	1000	"intron (NM_001018057, intron 3 of 6)"	"intron (NM_001018057, intron 3 of 6)"	13781	NM_001018057	27122	Hs.292156	NM_013253	ENSG00000050165	DKK3	REIC|RIG	dickkopf WNT signaling pathway inhibitor 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-2358	chr11	12500356	12501356	+	14.1	1000	"intron (NM_018222, intron 4 of 12)"	AluJb|SINE|Alu	101830	NM_018222	55742	Hs.432914	NM_018222	ENSG00000197702	PARVA	CH-ILKBP|MXRA2	parvin alpha	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr11-2359	chr11	12540140	12541140	+	14.7	1000	"intron (NM_018222, intron 12 of 12)"	"intron (NM_018222, intron 12 of 12)"	141614	NM_018222	55742	Hs.432914	NM_018222	ENSG00000197702	PARVA	CH-ILKBP|MXRA2	parvin alpha	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr11-236	chr11	279530	281381	+	34.6	1851	"exon (NM_138329, exon 4 of 8)"	"exon (NM_138329, exon 4 of 8)"	1885	NM_138329	171389	Hs.352611	NM_138329	ENSG00000174885	NLRP6	AVR|CLR11.4|NALP6|NAVR|NAVR/AVR|PAN3|PYPAF5	NLR family pyrin domain containing 6	protein-coding	34.56	5.82	5.93814433	6.75E-13
chr11-2362	chr11	12708983	12709983	+	16	1000	"intron (NM_021961, intron 2 of 12)"	"intron (NM_021961, intron 2 of 12)"	13514	NM_021961	7003	Hs.655331	NM_021961	ENSG00000187079	TEAD1	AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1	TEA domain transcription factor 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr11-2363	chr11	12722569	12723569	+	15.4	1000	"intron (NM_021961, intron 2 of 12)"	"intron (NM_021961, intron 2 of 12)"	27100	NM_021961	7003	Hs.655331	NM_021961	ENSG00000187079	TEAD1	AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1	TEA domain transcription factor 1	protein-coding	15.36	0	15.82260557	1.26E-14
chr11-2366	chr11	12806992	12807992	+	16	1000	"intron (NM_021961, intron 3 of 12)"	"intron (NM_021961, intron 3 of 12)"	111523	NM_021961	7003	Hs.655331	NM_021961	ENSG00000187079	TEAD1	AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1	TEA domain transcription factor 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr11-2368	chr11	12900818	12901818	+	16	1000	"exon (NM_021961, exon 6 of 13)"	"exon (NM_021961, exon 6 of 13)"	109777	NR_038904	100506305	Hs.153408	NR_038904	ENSG00000251381	LINC00958	-	long intergenic non-protein coding RNA 958	ncRNA	16	3.88	4.12371134	7.91E-05
chr11-2369	chr11	12904045	12905045	+	15.4	1000	"intron (NM_021961, intron 8 of 12)"	"intron (NM_021961, intron 8 of 12)"	106550	NR_038904	100506305	Hs.153408	NR_038904	ENSG00000251381	LINC00958	-	long intergenic non-protein coding RNA 958	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr11-2370	chr11	12933385	12934709	+	19.2	1324	"intron (NM_021961, intron 10 of 12)"	"intron (NM_021961, intron 10 of 12)"	77048	NR_038904	100506305	Hs.153408	NR_038904	ENSG00000251381	LINC00958	-	long intergenic non-protein coding RNA 958	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr11-2376	chr11	15044346	15045346	+	15.4	1000	Intergenic	HUERS-P1-int|LTR|ERV1	-50300	NM_000728	797	Hs.534305	NM_000728	ENSG00000175868	CALCB	CALC2|CGRP-II|CGRP2	calcitonin related polypeptide beta	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-2377	chr11	15261777	15262777	+	16	1000	"intron (NM_001278316, intron 10 of 10)"	MIRc|SINE|MIR	91629	NM_001278313	387755	Hs.591997	NM_001031853	ENSG00000188487	INSC	-	inscuteable homolog (Drosophila)	protein-coding	16	0.97	16.49484536	3.54E-11
chr11-2386	chr11	16632327	16633327	+	13.4	1000	Intergenic	Intergenic	-127321	NM_014267	10944	Hs.368226	NM_014267	ENSG00000110696	C11orf58	IMAGE145052|SMAP	chromosome 11 open reading frame 58	protein-coding	13.44	1.46	9.205479452	3.57E-07
chr11-2387	chr11	17416385	17417385	+	16	1000	"intron (NM_001287174, intron 35 of 38)"	"intron (NM_001287174, intron 35 of 38)"	-6007	NM_001166290	3767	Hs.248141	NM_000525	ENSG00000187486	KCNJ11	BIR|HHF2|IKATP|KIR6.2|MODY13|PHHI|TNDM3	potassium voltage-gated channel subfamily J member 11	protein-coding	16	3.88	4.12371134	7.91E-05
chr11-239	chr11	2132778	2134193	+	24.3	1415	Intergenic	Charlie1|DNA|hAT-Charlie	21954	NR_030158	619552		NR_030158	ENSG00000207805	MIR483	MIRN483|hsa-mir-483|mir-483	microRNA 483	ncRNA	24.32	1.94	12.53608247	5.33E-15
chr11-2394	chr11	17574557	17577958	+	42.9	3401	"intron (NM_001292063, intron 6 of 55)"	"intron (NM_001292063, intron 6 of 55)"	7337	NM_001292063	340990	Hs.688380	NM_198497	ENSG00000188162	OTOG	DFNB18B|MLEMP|OTGN	otogelin	protein-coding	42.89	9.71	4.417095778	8.16E-12
chr11-2399	chr11	18176357	18177357	+	16	1000	Intergenic	Tigger13a|DNA|TcMar-Tigger	-17527	NM_054032	117196	Hs.632138	NM_054032	ENSG00000179817	MRGPRX4	GPCR|MRGX4|SNSR6	MAS related GPR family member X4	protein-coding	16	3.4	4.705882353	2.25E-05
chr11-2402	chr11	19710605	19711940	+	22.4	1335	"intron (NM_001111018, intron 1 of 37)"	"intron (NM_001111018, intron 1 of 37)"	-23609	NM_145117	89797	Hs.64341	NM_145117	ENSG00000166833	NAV2	HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2	neuron navigator 2	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr11-2403	chr11	19756138	19758161	+	30.7	2023	"intron (NM_182964, intron 1 of 37)"	MIR|SINE|MIR	-20931	NR_015384	100126784	Hs.64341	NR_015384		LOC100126784	-	uncharacterized LOC100126784	ncRNA	30.72	4.85	6.334020619	3.34E-12
chr11-2405	chr11	19990332	19991332	+	15.4	1000	"intron (NM_182964, intron 10 of 37)"	"intron (NM_182964, intron 10 of 37)"	-53270	NM_001111019	89797	Hs.64341	NM_145117	ENSG00000166833	NAV2	HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2	neuron navigator 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-2407	chr11	20340687	20341687	+	15.4	1000	Intergenic	Intergenic	-44044	NM_006410	10553	Hs.90753	NM_006410	ENSG00000109854	HTATIP2	CC3|SDR44U1|TIP30	HIV-1 Tat interactive protein 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-2409	chr11	23699764	23700764	+	14.7	1000	Intergenic	Intergenic	-259528	NR_107021	102465860		NR_107021	ENSG00000275868	MIR8054	hsa-mir-8054	microRNA 8054	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr11-2415	chr11	31998539	31999539	+	16	1000	Intergenic	Intergenic	63825	NR_120527	100506675	Hs.446169	NR_120526	ENSG00000254584	LOC100506675	-	uncharacterized LOC100506675	ncRNA	16	0.97	16.49484536	3.54E-11
chr11-2416	chr11	32025200	32026200	+	16	1000	Intergenic	MIRb|SINE|MIR	37164	NR_120527	100506675	Hs.446169	NR_120526	ENSG00000254584	LOC100506675	-	uncharacterized LOC100506675	ncRNA	16	1.46	10.95890411	3.44E-09
chr11-2418	chr11	32276899	32277899	+	15.4	1000	Intergenic	Intergenic	-111941	NR_132770	106635521		NR_132770		SNORA88	-	"small nucleolar RNA, H/ACA box 88"	snoRNA	15.36	2.43	6.320987654	7.90E-07
chr11-2419	chr11	32848978	32849978	+	15.4	1000	Intergenic	Intergenic	-2003	NM_024081	79056	Hs.471695	NM_024081	ENSG00000135378	PRRG4	PRGP4|TMG4	proline rich and Gla domain 4	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-2420	chr11	33411473	33412473	+	15.4	1000	Intergenic	Intergenic	132096	NM_001278162	10114	Hs.201918	NM_005734	ENSG00000110422	HIPK3	DYRK6|FIST3|PKY|YAK1	homeodomain interacting protein kinase 3	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr11-2421	chr11	33475973	33476973	+	13.4	1000	Intergenic	AluY|SINE|Alu	-87404	NM_012194	25758	Hs.502266	NM_012194	ENSG00000110427	KIAA1549L	C11orf41|C11orf69|G2	KIAA1549 like	protein-coding	13.44	2.43	5.530864198	2.99E-05
chr11-2423	chr11	33802191	33803191	+	16	1000	Intergenic	Intergenic	6446	NR_120550	101928440	Hs.202343	NR_120550	ENSG00000254508	FBXO3-AS1	-	FBXO3 antisense RNA 1 (head to head)	ncRNA	16	3.4	4.705882353	2.25E-05
chr11-2424	chr11	33841078	33843502	+	32.6	2424	Intergenic	Intergenic	46045	NR_120550	101928440	Hs.202343	NR_120550	ENSG00000254508	FBXO3-AS1	-	FBXO3 antisense RNA 1 (head to head)	ncRNA	32.64	5.34	6.112359551	3.79E-12
chr11-2428	chr11	34237620	34239627	+	33.3	2007	"intron (NM_145804, intron 1 of 16)"	MER66B|LTR|ERV1	111512	NM_001144030	55226	Hs.577281	NM_024662	ENSG00000135372	NAT10	ALP|NET43	N-acetyltransferase 10	protein-coding	33.28	6.8	4.894117647	1.08E-10
chr11-243	chr11	2949335	2950651	+	22.4	1316	"intron (NM_003311, intron 1 of 1)"	CpG	657	NM_003311	7262	Hs.154036	NM_003311	ENSG00000181649	PHLDA2	BRW1C|BWR1C|HLDA2|IPL|TSSC3	pleckstrin homology like domain family A member 2	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr11-2432	chr11	34549351	34550928	+	23	1577	Intergenic	AluSq2|SINE|Alu	-14792	NM_001243080	2001	Hs.11713	NM_001422	ENSG00000135374	ELF5	ESE2	E74 like ETS transcription factor 5	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr11-2438	chr11	34863704	34864704	+	15.4	1000	Intergenic	MIRb|SINE|MIR	-73473	NM_001135024	8050	Hs.502315	NM_003477	ENSG00000110435	PDHX	DLDBP|E3BP|OPDX|PDX1|proX	pyruvate dehydrogenase complex component X	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-2439	chr11	35368463	35369463	+	14.7	1000	"intron (NM_001195728, intron 1 of 11)"	MER117|DNA|hAT-Charlie	72142	NM_004171	6506	Hs.502338	NM_004171	ENSG00000110436	SLC1A2	EAAT2|EIEE41|GLT-1|HBGT	solute carrier family 1 member 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-2448	chr11	36534925	36535925	+	14.1	1000	Intergenic	THE1B|LTR|ERVL-MaLR	-3562	NM_004620	7189	Hs.444172	NM_004620	ENSG00000175104	TRAF6	MGC:3310|RNF85	TNF receptor associated factor 6	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr11-2452	chr11	44020244	44021244	+	14.7	1000	Intergenic	MIR|SINE|MIR	-48787	NM_001031854	390110	Hs.558851	NM_001031854	ENSG00000205126	ACCSL	-	1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-2455	chr11	44340500	44343520	+	44.8	3020	Intergenic	MIRb|SINE|MIR	-10294	NM_021926	60529	Hs.436055	NM_021926	ENSG00000052850	ALX4	CRS5|FND2	ALX homeobox 4	protein-coding	44.81	5.82	7.699312715	1.25E-19
chr11-2458	chr11	44428911	44429911	+	14.7	1000	Intergenic	Intergenic	-97695	NM_021926	60529	Hs.436055	NM_021926	ENSG00000052850	ALX4	CRS5|FND2	ALX homeobox 4	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-2459	chr11	44474215	44475215	+	16	1000	Intergenic	Intergenic	-112426	NM_002231	3732	Hs.527778	NM_002231	ENSG00000085117	CD82	4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27	CD82 molecule	protein-coding	16	0.97	16.49484536	3.54E-11
chr11-2462	chr11	44869615	44870615	+	15.4	1000	"intron (NM_130783, intron 1 of 8)"	"intron (NM_130783, intron 1 of 8)"	84139	NM_130783	90139	Hs.385634	NM_130783	ENSG00000157570	TSPAN18	TSPAN	tetraspanin 18	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-2463	chr11	44887022	44888022	+	15.4	1000	"intron (NM_130783, intron 2 of 8)"	"intron (NM_130783, intron 2 of 8)"	84237	NM_001318384	9537	Hs.554791	NM_006034	ENSG00000175274	TP53I11	PIG11	tumor protein p53 inducible protein 11	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr11-2465	chr11	44970840	44972327	+	18.6	1487	"5' UTR (NM_001258320, exon 1 of 10)"	"5' UTR (NM_001258320, exon 1 of 10)"	176	NM_001318384	9537	Hs.554791	NM_006034	ENSG00000175274	TP53I11	PIG11	tumor protein p53 inducible protein 11	protein-coding	18.56	1.46	12.71232877	2.41E-11
chr11-2466	chr11	45167211	45169712	+	31.4	2501	promoter-TSS (NM_001256695)	promoter-TSS (NM_001256695)	-433	NM_001256696	56981	Hs.178715	NM_020229	ENSG00000019485	PRDM11	PFM8	PR/SET domain 11	protein-coding	31.36	2.91	10.7766323	6.73E-17
chr11-2467	chr11	45183366	45184366	+	17.9	1000	"intron (NM_001256696, intron 1 of 6)"	MIRc|SINE|MIR	14972	NM_001256695	56981	Hs.178715	NM_020229	ENSG00000019485	PRDM11	PFM8	PR/SET domain 11	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr11-2469	chr11	45301945	45303539	+	21.1	1594	"intron (NM_001247987, intron 1 of 7)"	AluSx1|SINE|Alu	5142	NM_020826	57586	Hs.436643	NM_020826	ENSG00000019505	SYT13	-	synaptotagmin 13	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr11-2473	chr11	45692502	45693502	+	15.4	1000	Intergenic	Intergenic	-5796	NM_003654	8534	Hs.104576	NM_003654	ENSG00000175264	CHST1	C6ST|GST-1|KS6ST|KSGal6ST|KSST	carbohydrate sulfotransferase 1	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr11-248	chr11	8288932	8292700	+	43.5	3768	promoter-TSS (NM_001270428)	promoter-TSS (NM_001270428)	-634	NM_001270428	4004	Hs.654426	NM_002315	ENSG00000166407	LMO1	RBTN1|RHOM1|TTG1	LIM domain only 1	protein-coding	43.53	4.85	8.975257732	4.10E-21
chr11-2484	chr11	48126235	48127235	+	14.7	1000	"intron (NM_002843, intron 1 of 24)"	"intron (NM_002843, intron 1 of 24)"	8401	NR_036119	100423000		NR_036119	ENSG00000263693	MIR3161	-	microRNA 3161	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr11-2487	chr11	56696680	56697680	+	16	1000	Intergenic	AluJo|SINE|Alu	-59209	NM_001005323	390181	Hs.554520	NM_001005323	ENSG00000181273	OR5AK2	-	olfactory receptor family 5 subfamily AK member 2	protein-coding	16	0.49	32.65306122	1.26E-14
chr11-2489	chr11	57000601	57001601	+	16	1000	TTS (NM_005161)	TTS (NM_005161)	3826	NR_027991	187	Hs.438311	NM_005161	ENSG00000134817	APLNR	AGTRL1|APJ|APJR|HG11	apelin receptor	protein-coding	16	1.46	10.95890411	3.44E-09
chr11-2495	chr11	60267439	60268439	+	15.4	1000	"intron (NM_001164470, intron 2 of 5)"	MIR|SINE|MIR	7688	NM_017716	54860	Hs.272789	NM_017716	ENSG00000071203	MS4A12	Ms4a10	membrane spanning 4-domains A12	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-2498	chr11	60499827	60501080	+	20.5	1253	"intron (NM_001310141, intron 2 of 5)"	MER75|DNA|PiggyBac	8971	NM_001310141	728588	Hs.739039	NM_001310141	ENSG00000214782	MS4A18	-	membrane spanning 4-domains A18	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr11-250	chr11	12847941	12848941	+	21.1	1000	"intron (NM_021961, intron 3 of 12)"	"intron (NM_021961, intron 3 of 12)"	152472	NM_021961	7003	Hs.655331	NM_021961	ENSG00000187079	TEAD1	AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1	TEA domain transcription factor 1	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr11-2503	chr11	61355911	61356911	+	15.4	1000	"intron (NR_110189, intron 1 of 3)"	"intron (NR_110189, intron 1 of 3)"	445	NR_110189	101927495	Hs.553866	NR_110189	ENSG00000250230	LOC101927495	-	uncharacterized LOC101927495	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr11-2507	chr11	61493634	61495899	+	31.4	2265	"intron (NM_006133, intron 6 of 19)"	"intron (NM_006133, intron 6 of 19)"	-25343	NM_001127392	745	Hs.473109	NM_013279	ENSG00000124920	MYRF	C11orf9|MRF|Ndt80|pqn-47	myelin regulatory factor	protein-coding	31.36	4.85	6.465979381	3.34E-12
chr11-2512	chr11	62248137	62249137	+	15.4	1000	"intron (NM_024060, intron 5 of 5)"	AluSq|SINE|Alu	62130	NM_003357	7356	Hs.523732	NM_003357	ENSG00000149021	SCGB1A1	CC10|CC16|CCPBP|CCSP|UGB|UP-1|UP1	secretoglobin family 1A member 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-2516	chr11	62693937	62697074	+	42.9	3137	Intergenic	Intergenic	-6493	NM_000738	1128	Hs.632119	NM_000738	ENSG00000168539	CHRM1	HM1|M1|M1R	cholinergic receptor muscarinic 1	protein-coding	42.89	7.77	5.51994852	2.23E-14
chr11-2519	chr11	62788190	62793577	+	76.2	5387	Intergenic	L3|LINE|CR1	-7566	NM_001184736	9376	Hs.266223	NM_004254	ENSG00000149452	SLC22A8	OAT3	solute carrier family 22 member 8	protein-coding	76.17	17.96	4.241091314	3.59E-19
chr11-2523	chr11	64197261	64198261	+	16	1000	Intergenic	Intergenic	-18768	NR_073177	100996455	Hs.634142	NR_073177	ENSG00000181908	LOC100996455	-	uncharacterized LOC100996455	ncRNA	16	3.4	4.705882353	2.25E-05
chr11-2524	chr11	64219957	64220957	+	15.4	1000	Intergenic	AluJr|SINE|Alu	3928	NR_073177	100996455	Hs.634142	NR_073177	ENSG00000181908	LOC100996455	-	uncharacterized LOC100996455	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr11-2526	chr11	64258086	64259086	+	16	1000	Intergenic	L1MEe|LINE|L1	42057	NR_073177	100996455	Hs.634142	NR_073177	ENSG00000181908	LOC100996455	-	uncharacterized LOC100996455	ncRNA	16	1.94	8.24742268	7.67E-08
chr11-2528	chr11	64458275	64459275	+	15.4	1000	"intron (NM_015080, intron 4 of 22)"	"intron (NM_015080, intron 4 of 22)"	31885	NM_138732	9379	Hs.372938	NM_015080	ENSG00000110076	NRXN2	-	neurexin 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-2530	chr11	64482617	64486399	+	53.1	3782	"intron (NM_015080, intron 1 of 22)"	"intron (NM_015080, intron 1 of 22)"	6152	NM_138732	9379	Hs.372938	NM_015080	ENSG00000110076	NRXN2	-	neurexin 2	protein-coding	53.13	6.31	8.419968304	6.20E-24
chr11-2533	chr11	65553384	65554769	+	17.3	1385	promoter-TSS (NM_004561)	promoter-TSS (NM_004561)	408	NR_031600	100302196		NR_031600	ENSG00000071894	MIR1234	MIRN1234|hsa-mir-1234	microRNA 1234	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr11-2535	chr11	65638478	65639478	+	16	1000	"intron (NM_016938, intron 3 of 10)"	"intron (NM_016938, intron 3 of 10)"	1427	NR_037718	30008	Hs.731454	NM_016938	ENSG00000172638	EFEMP2	ARCL1B|FBLN4|MBP1|UPH1	EGF containing fibulin like extracellular matrix protein 2	protein-coding	16	0.97	16.49484536	3.54E-11
chr11-2539	chr11	66498868	66499868	+	15.4	1000	Intergenic	L2a|LINE|L2	-10498	NM_006946	6712	Hs.26915	NM_006946	ENSG00000173898	SPTBN2	GTRAP41|SCA5|SCAR14	"spectrin beta, non-erythrocytic 2"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-2541	chr11	66665797	66666797	+	15.4	1000	"intron (NM_001040716, intron 3 of 22)"	L1MB8|LINE|L1	9043	NM_022172	5091	Hs.89890	NM_000920	ENSG00000173599	PC	PCB	pyruvate carboxylase	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-2542	chr11	66798803	66801195	+	36.5	2392	"intron (NM_001318773, intron 3 of 8)"	MIR|SINE|MIR	9183	NM_001318775	91683	Hs.287636	NM_177963	ENSG00000173227	SYT12	SYT11|sytXII	synaptotagmin 12	protein-coding	36.48	6.31	5.781299525	7.13E-13
chr11-2547	chr11	67342854	67345926	+	50.6	3072	Intergenic	Intergenic	-6676	NM_000852	2950	Hs.523836	NM_000852	ENSG00000084207	GSTP1	DFN7|FAEES3|GST3|GSTP|HEL-S-22|PI	glutathione S-transferase pi 1	protein-coding	50.57	8.74	5.78604119	2.17E-17
chr11-2551	chr11	68760845	68761845	+	16	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	-12890	NM_198923	116512	Hs.527802	NM_198923	ENSG00000172938	MRGPRD	MRGD|TGR7	MAS related GPR family member D	protein-coding	16	0.97	16.49484536	3.54E-11
chr11-2552	chr11	68779857	68780857	+	16	1000	"intron (NR_120541, intron 1 of 5)"	"intron (NR_120541, intron 1 of 5)"	493	NM_145015	116535	Hs.118513	NM_145015	ENSG00000172935	MRGPRF	GPR140|GPR168|MRGF|RTA	MAS related GPR family member F	protein-coding	16	0	16.4818808	1.26E-14
chr11-2553	chr11	68920255	68921255	+	14.7	1000	"intron (NR_104161, intron 2 of 2)"	"intron (NR_104161, intron 2 of 2)"	18275	NR_104161	338694	Hs.564235	NR_104161	ENSG00000261070	LOC338694	-	uncharacterized LOC338694	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr11-2560	chr11	69355322	69356322	+	15.4	1000	Intergenic	Intergenic	55493	NR_120545	101928292	Hs.736219	NR_120542		LINC01488	BRCAT8	long intergenic non-protein coding RNA 1488	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr11-2562	chr11	69534988	69536507	+	22.4	1519	Intergenic	Intergenic	-16641	NM_005117	9965	Hs.249200	NM_005117	ENSG00000162344	FGF19	-	fibroblast growth factor 19	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr11-2564	chr11	69541042	69542042	+	15.4	1000	Intergenic	Intergenic	-22436	NM_005117	9965	Hs.249200	NM_005117	ENSG00000162344	FGF19	-	fibroblast growth factor 19	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr11-2567	chr11	69825348	69829164	+	47.4	3816	Intergenic	MER113|DNA|hAT-Charlie	82774	NR_120530	101928443	Hs.313468	NR_120529	ENSG00000248844	LOC101928443	-	uncharacterized LOC101928443	ncRNA	47.37	9.71	4.878475798	1.65E-14
chr11-2573	chr11	69986809	69989341	+	37.1	2532	"intron (NM_018043, intron 11 of 25)"	"intron (NM_018043, intron 11 of 25)"	56559	NR_030691	55107	Hs.503074	NM_018043	ENSG00000131620	ANO1	DOG1|ORAOV2|TAOS2|TMEM16A	anoctamin 1	protein-coding	37.12	5.82	6.378006873	1.70E-14
chr11-2575	chr11	70018769	70019769	+	16	1000	"intron (NM_018043, intron 22 of 25)"	"intron (NM_018043, intron 22 of 25)"	-30000	NM_003824	8772	Hs.86131	NM_003824	ENSG00000168040	FADD	GIG3|MORT1	Fas associated via death domain	protein-coding	16	2.91	5.498281787	4.98E-06
chr11-2576	chr11	70068708	70074263	+	79.4	5555	Intergenic	AluSq2|SINE|Alu	22216	NM_003824	8772	Hs.86131	NM_003824	ENSG00000168040	FADD	GIG3|MORT1	Fas associated via death domain	protein-coding	79.37	15.53	5.110753381	3.40E-24
chr11-2577	chr11	70086338	70087338	+	12.8	1000	Intergenic	Intergenic	-29968	NR_045286	8500	Hs.530749	NM_003626	ENSG00000131626	PPFIA1	LIP.1|LIP1|LIPRIN	PTPRF interacting protein alpha 1	protein-coding	12.8	1.46	8.767123288	3.57E-07
chr11-2578	chr11	70250375	70251375	+	15.4	1000	"intron (NM_005231, intron 1 of 17)"	AluSp|SINE|Alu	6263	NM_138565	2017	Hs.596164	NM_005231	ENSG00000085733	CTTN	EMS1	cortactin	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr11-2579	chr11	70366213	70369279	+	47.4	3066	"intron (NM_012309, intron 14 of 22)"	(TG)n|Simple_repeat|Simple_repeat	-109453	NR_046567	100874198	Hs.656610	NR_046567	ENSG00000226627	SHANK2-AS1	-	SHANK2 antisense RNA 1	ncRNA	47.37	10.19	4.648675172	6.97E-14
chr11-2580	chr11	70650395	70651395	+	15.4	1000	"intron (NM_012309, intron 10 of 22)"	"intron (NM_012309, intron 10 of 22)"	-58000	NR_073536	220070	Hs.326766	NM_145308	ENSG00000171671	SHANK2-AS3	C11orf76	SHANK2 antisense RNA 3	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr11-2581	chr11	70781023	70782023	+	16	1000	"intron (NM_012309, intron 7 of 22)"	"intron (NM_012309, intron 7 of 22)"	-63050	NR_037437	100500844		NR_037437	ENSG00000263744	MIR3664	mir-3664	microRNA 3664	ncRNA	16	1.46	10.95890411	3.44E-09
chr11-2584	chr11	70889692	70890692	+	14.7	1000	"intron (NM_012309, intron 1 of 22)"	L1M4|LINE|L1	45650	NM_012309	22941	Hs.268726	NM_012309	ENSG00000162105	SHANK2	AUTS17|CORTBP1|CTTNBP1|ProSAP1|SHANK|SPANK-3	SH3 and multiple ankyrin repeat domains 2	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr11-259	chr11	34449158	34450158	+	21.1	1000	Intergenic	Intergenic	-10814	NM_001752	847	Hs.502302	NM_001752	ENSG00000121691	CAT	-	catalase	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr11-2590	chr11	72985981	72986981	+	16	1000	"intron (NM_001277208, intron 1 of 1)"	"intron (NM_001277208, intron 1 of 1)"	3294	NM_001277208	5031	Hs.16362	NM_004154	ENSG00000171631	P2RY6	P2Y6	pyrimidinergic receptor P2Y6	protein-coding	16	1.94	8.24742268	7.67E-08
chr11-2593	chr11	74846512	74847512	+	16	1000	Intergenic	Intergenic	-15020	NM_001145212	11309	Hs.7884	NM_007256	ENSG00000137491	SLCO2B1	OATP-B|OATP2B1|OATPB|SLC21A9	solute carrier organic anion transporter family member 2B1	protein-coding	16	3.88	4.12371134	7.91E-05
chr11-2596	chr11	75015567	75019272	+	41.6	3705	"intron (NM_020251, intron 1 of 14)"	"intron (NM_020251, intron 1 of 14)"	28811	NR_029891	442900		NR_029891	ENSG00000199090	MIR326	MIRN326|hsa-mir-326|mir-326	microRNA 326	ncRNA	41.61	4.85	8.579381443	3.22E-19
chr11-260	chr11	34673735	34674735	+	21.1	1000	"intron (NM_012153, intron 6 of 8)"	"intron (NM_012153, intron 6 of 8)"	20224	NM_001206616	26298	Hs.653859	NM_012153	ENSG00000135373	EHF	ESE3|ESE3B|ESEJ	ETS homologous factor	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr11-2605	chr11	75912162	75913778	+	28.8	1616	"intron (NM_004626, intron 1 of 4)"	"intron (NM_004626, intron 1 of 4)"	4604	NM_004626	7481	Hs.108219	NM_004626	ENSG00000085741	WNT11	HWNT11	Wnt family member 11	protein-coding	28.8	1.94	14.84536082	1.99E-18
chr11-2607	chr11	76345970	76346970	+	14.7	1000	Intergenic	Intergenic	34574	NM_005512	2615	Hs.151641	NM_005512	ENSG00000137507	LRRC32	D11S833E|GARP	leucine rich repeat containing 32	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-2608	chr11	76380323	76382473	+	41	2150	promoter-TSS (NM_005512)	promoter-TSS (NM_005512)	-354	NM_005512	2615	Hs.151641	NM_005512	ENSG00000137507	LRRC32	D11S833E|GARP	leucine rich repeat containing 32	protein-coding	40.97	3.88	10.55927835	5.31E-22
chr11-2609	chr11	78398364	78399635	+	19.2	1271	"intron (NM_001098816, intron 29 of 33)"	"intron (NM_001098816, intron 29 of 33)"	-113090	NM_024678	79731	Hs.503389	NM_024678	ENSG00000137513	NARS2	DFNB94|SLM5|asnRS	"asparaginyl-tRNA synthetase 2, mitochondrial (putative)"	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr11-2611	chr11	78546083	78547083	+	16	1000	"intron (NM_001098816, intron 12 of 33)"	AluSc|SINE|Alu	-260674	NM_024678	79731	Hs.503389	NM_024678	ENSG00000137513	NARS2	DFNB94|SLM5|asnRS	"asparaginyl-tRNA synthetase 2, mitochondrial (putative)"	protein-coding	16	0.97	16.49484536	3.54E-11
chr11-2614	chr11	78793912	78795333	+	19.2	1421	"intron (NM_001098816, intron 4 of 33)"	L3|LINE|CR1	318531	NR_030598	100126333		NR_030598	ENSG00000211997	MIR708	MIRN708|hsa-mir-708	microRNA 708	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr11-2617	chr11	85391172	85393830	+	38.4	2658	Intergenic	Intergenic	4819	NM_152723	220388	Hs.376241	NM_152723	ENSG00000179071	CCDC89	-	coiled-coil domain containing 89	protein-coding	38.4	7.77	4.942084942	3.34E-12
chr11-2621	chr11	85898038	85899038	+	16	1000	Intergenic	Intergenic	-56888	NM_001308007	8726	Hs.503510	NM_003797	ENSG00000074266	EED	HEED|WAIT1	embryonic ectoderm development	protein-coding	16	3.88	4.12371134	7.91E-05
chr11-2634	chr11	95025884	95026884	+	14.1	1000	Intergenic	Intergenic	-60679	NM_001271594	143686	Hs.120633	NM_144665	ENSG00000149212	SESN3	SEST3	sestrin 3	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr11-2635	chr11	95805613	95806613	+	14.7	1000	"intron (NM_032427, intron 2 of 4)"	"intron (NM_032427, intron 2 of 4)"	-148742	NM_016156	8898	Hs.181326	NM_016156	ENSG00000087053	MTMR2	CMT4B|CMT4B1	myotubularin related protein 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr11-2638	chr11	102468774	102470119	+	16.6	1345	"intron (NM_004771, intron 6 of 9)"	"intron (NM_004771, intron 6 of 9)"	26617	NM_004771	9313	Hs.591946	NM_004771	ENSG00000137674	MMP20	AI2A2|MMP-20	matrix metallopeptidase 20	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr11-2641	chr11	111015345	111016345	+	16	1000	Intergenic	Intergenic	-110862	NM_198498	341032	Hs.298685	NM_198498	ENSG00000150750	C11orf53	-	chromosome 11 open reading frame 53	protein-coding	16	0.97	16.49484536	3.54E-11
chr11-2642	chr11	111119695	111120695	+	16	1000	Intergenic	Intergenic	-6512	NM_198498	341032	Hs.298685	NM_198498	ENSG00000150750	C11orf53	-	chromosome 11 open reading frame 53	protein-coding	16	3.88	4.12371134	7.91E-05
chr11-2644	chr11	112157024	112158024	+	16	1000	"intron (NR_126004, intron 1 of 3)"	L2b|LINE|L2	16052	NR_126004	283140	Hs.651827	NR_126004	ENSG00000250303	LOC283140	-	uncharacterized LOC283140	ncRNA	16	3.88	4.12371134	7.91E-05
chr11-2645	chr11	112454320	112455320	+	15.4	1000	Intergenic	L2c|LINE|L2	-28295	NR_104155	387810	Hs.512255	NR_104155	ENSG00000255484	LOC387810	-	uncharacterized LOC387810	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr11-2649	chr11	113850449	113851449	+	18.6	1000	"intron (NR_046363, intron 3 of 7)"	"intron (NR_046363, intron 3 of 7)"	2727	NM_001161772	3359	Hs.413899	NM_000869	ENSG00000166736	HTR3A	5-HT-3|5-HT3A|5-HT3R|5HT3R|HTR3	5-hydroxytryptamine receptor 3A	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr11-265	chr11	36233485	36234735	+	21.8	1250	"intron (NM_001304264, intron 4 of 5)"	AluJo|SINE|Alu	76889	NM_001101653	29099	Hs.279836	NM_014186	ENSG00000110442	COMMD9	HSPC166	COMM domain containing 9	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr11-2651	chr11	114011193	114012193	+	15.4	1000	"intron (NM_001018011, intron 2 of 6)"	"intron (NM_001018011, intron 2 of 6)"	80405	NM_001018011	7704	Hs.591945	NM_006006	ENSG00000109906	ZBTB16	PLZF|ZNF145	zinc finger and BTB domain containing 16	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-2653	chr11	114669266	114670266	+	16	1000	Intergenic	Intergenic	120566	NM_182495	120406	Hs.446760	NM_182495	ENSG00000204361	NXPE2	FAM55B	neurexophilin and PC-esterase domain family member 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr11-2654	chr11	114864527	114865527	+	15.4	1000	Intergenic	MLT1J|LTR|ERVL-MaLR	315827	NM_182495	120406	Hs.446760	NM_182495	ENSG00000204361	NXPE2	FAM55B	neurexophilin and PC-esterase domain family member 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-2655	chr11	115282868	115283868	+	16	1000	"intron (NM_001098517, intron 1 of 8)"	"intron (NM_001098517, intron 1 of 8)"	15894	NR_135102	105369507	Hs.664155	NR_135102	ENSG00000256315	LOC105369507	-	uncharacterized LOC105369507	ncRNA	16	1.94	8.24742268	7.67E-08
chr11-2657	chr11	115930244	115931244	+	16.6	1000	Intergenic	L2c|LINE|L2	-299826	NR_034148	283143	Hs.130499	NR_034148		LINC00900	-	long intergenic non-protein coding RNA 900	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr11-2664	chr11	116370585	116375183	+	74.2	4598	Intergenic	Intergenic	-137255	NR_135069	101929011	Hs.733911	NR_135069	ENSG00000237937	LOC101929011	-	uncharacterized LOC101929011	ncRNA	74.25	13.59	5.463576159	4.08E-24
chr11-2667	chr11	116409349	116410349	+	15.4	1000	Intergenic	MIRb|SINE|MIR	-100290	NR_135069	101929011	Hs.733911	NR_135069	ENSG00000237937	LOC101929011	-	uncharacterized LOC101929011	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr11-2674	chr11	117367767	117368767	+	14.7	1000	"intron (NM_020693, intron 11 of 32)"	"intron (NM_020693, intron 11 of 32)"	169696	NM_014956	22897	Hs.504009	NM_014956	ENSG00000110274	CEP164	NPHP15	centrosomal protein 164	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-2675	chr11	117385941	117396372	+	133.1	10431	"intron (NM_020693, intron 6 of 32)"	"intron (NM_020693, intron 6 of 32)"	192585	NM_014956	22897	Hs.504009	NM_014956	ENSG00000110274	CEP164	NPHP15	centrosomal protein 164	protein-coding	133.14	22.81	5.836913634	2.65E-44
chr11-2679	chr11	117554932	117557221	+	37.8	2289	"intron (NM_020693, intron 3 of 32)"	MIR3|SINE|MIR	111900	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	37.76	3.88	9.731958763	5.72E-19
chr11-2685	chr11	117645336	117650315	+	71	4979	"intron (NM_020693, intron 2 of 32)"	"intron (NM_020693, intron 2 of 32)"	20151	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	71.05	12.62	5.629952456	2.28E-23
chr11-2689	chr11	117709469	117710469	+	14.1	1000	"intron (NM_001164837, intron 8 of 8)"	"intron (NM_001164837, intron 8 of 8)"	-11162	NM_021603	486	Hs.731865	NM_001680	ENSG00000137731	FXYD2	ATP1G1|HOMG2	FXYD domain containing ion transport regulator 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr11-2692	chr11	117750652	117754141	+	46.1	3489	Intergenic	MLT1J|LTR|ERVL-MaLR	-4195	NM_001164831	53826	Hs.744850	NM_022003	ENSG00000137726	FXYD6	-	FXYD domain containing ion transport regulator 6	protein-coding	46.09	6.8	6.777941176	1.95E-18
chr11-2694	chr11	117914814	117915814	+	14.1	1000	"intron (NR_038318, intron 2 of 3)"	AluSx1|SINE|Alu	-32413	NM_019894	56649	Hs.161985	NM_019894	ENSG00000137648	TMPRSS4	CAPH2|MT-SP2|TMPRSS3	"transmembrane protease, serine 4"	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr11-2697	chr11	117968008	117969008	+	16	1000	"intron (NM_001290094, intron 2 of 12)"	AluSq2|SINE|Alu	-11000	NR_038318	100526771	Hs.627426	NR_038318	ENSG00000255274	TMPRSS4-AS1	-	TMPRSS4 antisense RNA 1	ncRNA	16	3.88	4.12371134	7.91E-05
chr11-2698	chr11	118021626	118027553	+	99.9	5927	promoter-TSS (NM_174934)	promoter-TSS (NM_174934)	-959	NM_001142348	6330	Hs.65239	NM_174934	ENSG00000177098	SCN4B	ATFB17|LQT10|Navbeta4	sodium voltage-gated channel beta subunit 4	protein-coding	99.85	13.11	7.616323417	2.26E-41
chr11-2702	chr11	118499223	118500223	+	15.4	1000	"intron (NM_001144758, intron 6 of 22)"	"intron (NM_001144758, intron 6 of 22)"	-14995	NR_106773	102466719		NR_106773	ENSG00000019144	MIR6716	hsa-mir-6716	microRNA 6716	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr11-2707	chr11	119348153	119349153	+	16	1000	"intron (NR_034160, intron 3 of 3)"	"intron (NR_034160, intron 3 of 3)"	-52958	NM_001311162	7070	Hs.644697	NM_006288	ENSG00000154096	THY1	CD90|CDw90	Thy-1 cell surface antigen	protein-coding	16	1.94	8.24742268	7.67E-08
chr11-2711	chr11	119381671	119386163	+	64.6	4492	Intergenic	Intergenic	-88222	NM_001311162	7070	Hs.644697	NM_006288	ENSG00000154096	THY1	CD90|CDw90	Thy-1 cell surface antigen	protein-coding	64.65	7.28	8.880494505	6.98E-30
chr11-2717	chr11	119624046	119626620	+	41.6	2574	Intergenic	Intergenic	25040	NR_120587	102724301	Hs.637640	NR_120587	ENSG00000254854	LOC102724301	-	uncharacterized LOC102724301	ncRNA	41.61	3.88	10.7242268	5.31E-22
chr11-2723	chr11	119974255	119975255	+	15.4	1000	Intergenic	(TGAA)n|Simple_repeat|Simple_repeat	24866	NM_001330382	23650	Hs.504115	NM_012101	ENSG00000137699	TRIM29	ATDC	tripartite motif containing 29	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-2727	chr11	120216862	120217862	+	15.4	1000	"intron (NM_015313, intron 1 of 40)"	"intron (NM_015313, intron 1 of 40)"	9744	NM_001198665	23365	Hs.24598	NM_015313	ENSG00000196914	ARHGEF12	LARG|PRO2792	Rho guanine nucleotide exchange factor 12	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-2728	chr11	120350688	120352316	+	26.9	1628	"intron (NM_001301084, intron 38 of 40)"	L2a|LINE|L2	-30953	NM_014619	2900	Hs.538738	NM_014619	ENSG00000149403	GRIK4	EAA1|GRIK|GluK4|KA1	glutamate ionotropic receptor kainate type subunit 4	protein-coding	26.88	5.34	5.033707865	3.94E-09
chr11-2730	chr11	120752077	120753986	+	30.1	1909	"intron (NM_001282470, intron 10 of 19)"	"intron (NM_001282470, intron 10 of 19)"	12475	NR_132790	101929227	Hs.627156	NR_132790	ENSG00000250493	LOC101929227	-	uncharacterized LOC101929227	ncRNA	30.08	4.85	6.202061856	2.13E-11
chr11-2731	chr11	121117205	121118205	+	16	1000	Intergenic	MER52C|LTR|ERV1	-45683	NM_006918	6309	Hs.287749	NM_006918	ENSG00000109929	SC5D	ERG3|S5DES|SC5DL	sterol-C5-desaturase	protein-coding	16	1.94	8.24742268	7.67E-08
chr11-2736	chr11	121648751	121649751	+	15.4	1000	Intergenic	Intergenic	321301	NR_029671	406911		NR_029671	ENSG00000207971	MIR125B1	MIRN125B1|mir-125b-1	microRNA 125b-1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr11-2737	chr11	121764927	121765927	+	14.7	1000	Intergenic	Intergenic	205125	NR_029671	406911		NR_029671	ENSG00000207971	MIR125B1	MIRN125B1|mir-125b-1	microRNA 125b-1	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr11-2739	chr11	121822108	121823108	+	16	1000	Intergenic	MIR|SINE|MIR	147944	NR_029671	406911		NR_029671	ENSG00000207971	MIR125B1	MIRN125B1|mir-125b-1	microRNA 125b-1	ncRNA	16	1.94	8.24742268	7.67E-08
chr11-2740	chr11	121892458	121893458	+	16	1000	Intergenic	Intergenic	77594	NR_029671	406911		NR_029671	ENSG00000207971	MIR125B1	MIRN125B1|mir-125b-1	microRNA 125b-1	ncRNA	16	1.94	8.24742268	7.67E-08
chr11-2744	chr11	122743191	122744560	+	21.8	1369	TTS (NM_001304782)	TTS (NM_001304782)	-9361	NM_024806	79864	Hs.164705	NM_024806	ENSG00000109944	C11orf63	-	chromosome 11 open reading frame 63	protein-coding	21.76	0.97	22.43298969	1.19E-17
chr11-2748	chr11	123014098	123015098	+	15.4	1000	"intron (NM_024769, intron 1 of 6)"	AluSz|SINE|Alu	51415	NM_024769	79827	Hs.591949	NM_024769	ENSG00000166250	CLMP	ACAM|ASAM|CSBM|CSBS	CXADR like membrane protein	protein-coding	15.36	0	15.82260557	1.26E-14
chr11-2751	chr11	123255211	123256733	+	26.2	1522	Intergenic	Intergenic	-3752	NR_039714	100616319		NR_039714	ENSG00000265357	MIR4493	-	microRNA 4493	ncRNA	26.24	4.85	5.410309278	4.26E-09
chr11-2752	chr11	123545281	123548262	+	43.5	2981	Intergenic	L2a|LINE|L2	-21456	NM_001040151	55800	Hs.4865	NM_018400	ENSG00000166257	SCN3B	ATFB16|BRGDA7|HSA243396|SCNB3	sodium voltage-gated channel beta subunit 3	protein-coding	43.53	9.71	4.483007209	1.81E-12
chr11-2766	chr11	125233267	125234267	+	14.1	1000	"intron (NM_022062, intron 4 of 12)"	MER63A|DNA|hAT-Blackjack	-131343	NM_001301851	403312	Hs.450611	NM_203452		LOC403312	-	putative uncharacterized protein MGC39545	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr11-2767	chr11	125237142	125238142	+	15.4	1000	"intron (NM_022062, intron 4 of 12)"	"intron (NM_022062, intron 4 of 12)"	-127468	NM_001301851	403312	Hs.450611	NM_203452		LOC403312	-	putative uncharacterized protein MGC39545	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-2769	chr11	125341484	125342484	+	14.7	1000	"intron (NM_005103, intron 3 of 9)"	L1ME1|LINE|L1	-23126	NM_001301851	403312	Hs.450611	NM_203452		LOC403312	-	putative uncharacterized protein MGC39545	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr11-2772	chr11	126329884	126331431	+	26.9	1547	"intron (NM_032531, intron 6 of 16)"	"intron (NM_032531, intron 6 of 16)"	54580	NM_001254759	6484	Hs.591947	NM_006278	ENSG00000110080	ST3GAL4	CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST3GalIV|STZ	"ST3 beta-galactoside alpha-2,3-sialyltransferase 4"	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr11-2773	chr11	126368620	126372106	+	53.8	3486	"intron (NM_032531, intron 4 of 16)"	AluSx1|SINE|Alu	94286	NM_001254759	6484	Hs.591947	NM_006278	ENSG00000110080	ST3GAL4	CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST3GalIV|STZ	"ST3 beta-galactoside alpha-2,3-sialyltransferase 4"	protein-coding	53.77	10.68	5.034644195	1.03E-16
chr11-2774	chr11	126373862	126374862	+	15.4	1000	"intron (NM_032531, intron 4 of 16)"	"intron (NM_032531, intron 4 of 16)"	98285	NM_001254759	6484	Hs.591947	NM_006278	ENSG00000110080	ST3GAL4	CGS23|NANTA3|SAT3|SIAT4|SIAT4C|ST3GalIV|STZ	"ST3 beta-galactoside alpha-2,3-sialyltransferase 4"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-2779	chr11	126491801	126495047	+	38.4	3246	"intron (NM_032531, intron 1 of 16)"	"intron (NM_032531, intron 1 of 16)"	-29249	NR_120532	101929427	Hs.600341	NR_120532	ENSG00000254607	LOC101929427	-	uncharacterized LOC101929427	ncRNA	38.4	9.22	4.164859002	1.94E-10
chr11-2781	chr11	126551126	126552126	+	16	1000	"intron (NR_120533, intron 1 of 1)"	L2a|LINE|L2	25645	NR_120533	101929427	Hs.600341	NR_120532	ENSG00000254607	LOC101929427	-	uncharacterized LOC101929427	ncRNA	16	1.46	10.95890411	3.44E-09
chr11-2785	chr11	126824314	126826222	+	29.4	1908	"intron (NM_032531, intron 1 of 16)"	"intron (NM_032531, intron 1 of 16)"	14626	NR_046986	100874251	Hs.319053	NR_046986	ENSG00000254960	KIRREL3-AS2	-	KIRREL3 antisense RNA 2	ncRNA	29.44	2.43	12.11522634	1.54E-17
chr11-2788	chr11	126837093	126838093	+	15.4	1000	"intron (NM_032531, intron 1 of 16)"	MIRc|SINE|MIR	20845	NR_036126	100422918		NR_036126	ENSG00000266215	MIR3167	-	microRNA 3167	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr11-2791	chr11	126876361	126877361	+	14.7	1000	TTS (NR_040078)	TTS (NR_040078)	4056	NR_040078	283165	Hs.730461	NM_173579	ENSG00000218109	KIRREL3-AS3	NCRNA00288|PRR10	KIRREL3 antisense RNA 3	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr11-2795	chr11	127729564	127730564	+	15.4	1000	Intergenic	Intergenic	589099	NR_120580	101929497	Hs.737442	NR_120580	ENSG00000273409	LOC101929497	-	uncharacterized LOC101929497	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr11-2800	chr11	127971751	127972751	+	14.1	1000	Intergenic	L2a|LINE|L2	419954	NM_005238	2113	Hs.369438	NM_005238	ENSG00000134954	ETS1	ETS-1|EWSR2|c-ets-1|p54	"ETS proto-oncogene 1, transcription factor"	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr11-2804	chr11	128768261	128769261	+	15.4	1000	TTS (NM_145013)	TTS (NM_145013)	6831	NM_145013	219833	Hs.689860	NM_145013	ENSG00000174370	C11orf45	-	chromosome 11 open reading frame 45	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-2805	chr11	128820958	128821958	+	16	1000	Intergenic	L1MEg|LINE|L1	-8164	NM_022112	63970	Hs.160953	NM_022112	ENSG00000120471	TP53AIP1	P53AIP1	tumor protein p53 regulated apoptosis inducing protein 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr11-2806	chr11	129254364	129255364	+	15.4	1000	"intron (NM_003658, intron 1 of 3)"	L1ME3C|LINE|L1	8983	NM_003658	8538	Hs.591944	NM_003658	ENSG00000043039	BARX2	-	BARX homeobox 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-2808	chr11	129288852	129289852	+	14.1	1000	"intron (NM_003658, intron 1 of 3)"	"intron (NM_003658, intron 1 of 3)"	43471	NM_003658	8538	Hs.591944	NM_003658	ENSG00000043039	BARX2	-	BARX homeobox 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr11-2810	chr11	129597343	129598343	+	15.4	1000	Intergenic	Intergenic	-87833	NM_138788	120224	Hs.504301	NM_138788	ENSG00000151715	TMEM45B	-	transmembrane protein 45B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-2812	chr11	131028600	131030084	+	21.8	1484	Intergenic	Intergenic	-211029	NM_001048209	50863	Hs.504352	NM_016522	ENSG00000182667	NTM	HNT|IGLON2|NTRI	neurotrimin	protein-coding	21.76	0.97	22.43298969	1.19E-17
chr11-2813	chr11	131240402	131242325	+	34.6	1923	"intron (NM_001048209, intron 1 of 7)"	"intron (NM_001048209, intron 1 of 7)"	992	NM_001048209	50863	Hs.504352	NM_016522	ENSG00000182667	NTM	HNT|IGLON2|NTRI	neurotrimin	protein-coding	34.56	3.88	8.907216495	5.09E-17
chr11-2814	chr11	131529386	131530750	+	23.7	1364	"intron (NM_001048209, intron 1 of 7)"	"intron (NM_001048209, intron 1 of 7)"	3382	NR_126159	101929637	Hs.730330	NM_207432	ENSG00000224795	NTM-AS1	C11orf39	NTM antisense RNA 1	ncRNA	23.68	2.43	9.744855967	2.61E-12
chr11-2815	chr11	131553713	131554713	+	16	1000	"intron (NM_001048209, intron 1 of 7)"	"intron (NM_001048209, intron 1 of 7)"	-20763	NR_126159	101929637	Hs.730330	NM_207432	ENSG00000224795	NTM-AS1	C11orf39	NTM antisense RNA 1	ncRNA	16	1.94	8.24742268	7.67E-08
chr11-2816	chr11	131808093	131809093	+	15.4	1000	"intron (NM_001144058, intron 1 of 7)"	L2a|LINE|L2	27881	NM_016522	50863	Hs.504352	NM_016522	ENSG00000182667	NTM	HNT|IGLON2|NTRI	neurotrimin	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-2818	chr11	132642593	132644623	+	33.9	2030	"intron (NM_001319104, intron 1 of 6)"	"intron (NM_001319104, intron 1 of 6)"	169924	NM_001319106	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	33.92	4.85	6.993814433	7.28E-14
chr11-2820	chr11	132940560	132943299	+	34.6	2739	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	-128266	NM_001319105	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	34.56	6.31	5.477020602	4.08E-12
chr11-2822	chr11	133019288	133020288	+	14.7	1000	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	-206125	NM_001319105	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	14.72	0	15.16333034	3.99E-13
chr11-2823	chr11	133026948	133027948	+	16	1000	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	-213785	NM_001319105	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	16	2.43	6.58436214	7.90E-07
chr11-2827	chr11	133214045	133215375	+	22.4	1330	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	187797	NM_001012393	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr11-2828	chr11	133254930	133256189	+	19.8	1259	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	146948	NM_001012393	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr11-2829	chr11	133275453	133276453	+	15.4	1000	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	126554	NM_001012393	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr11-2832	chr11	133584568	133586120	+	21.8	1552	Intergenic	Intergenic	94927	NR_120444	646522	Hs.560000	NR_120444	ENSG00000255258	LOC646522	-	uncharacterized LOC646522	ncRNA	21.76	0.97	22.43298969	1.19E-17
chr11-2837	chr11	134279888	134285833	+	73.6	5945	Intergenic	CpG-4966	-1048	NM_018644	27087	Hs.381050	NM_018644	ENSG00000109956	B3GAT1	CD57|GLCATP|GLCUATP|HNK1|LEU7|NK-1|NK1	"beta-1,3-glucuronyltransferase 1"	protein-coding	73.61	11.65	6.318454936	1.51E-26
chr11-2841	chr11	134397109	134398109	+	15.4	1000	Intergenic	Intergenic	91233	NR_033852	283177	Hs.504390	NR_033852		LOC283177	-	uncharacterized LOC283177	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr11-2843	chr11	134478381	134479381	+	15.4	1000	Intergenic	Intergenic	172505	NR_033852	283177	Hs.504390	NR_033852		LOC283177	-	uncharacterized LOC283177	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr11-2853	chr11	134776860	134777860	+	16	1000	Intergenic	AluSx|SINE|Alu	-77886	NR_135050	100507548	Hs.639995	NR_135050		LOC100507548	-	uncharacterized LOC100507548	ncRNA	16	1.94	8.24742268	7.67E-08
chr11-2854	chr11	134921513	134922513	+	13.4	1000	Intergenic	L2a|LINE|L2	66767	NR_135050	100507548	Hs.639995	NR_135050		LOC100507548	-	uncharacterized LOC100507548	ncRNA	13.44	1.46	9.205479452	3.57E-07
chr11-2855	chr11	257188	258188	+	14.7	1000	Intergenic	Intergenic	20880	NM_175932	5719	Hs.134688	NM_002817	ENSG00000185627	PSMD13	HSPC027|Rpn9|S11|p40.5	"proteasome 26S subunit, non-ATPase 13"	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr11-2860	chr11	1123591	1124591	+	14.7	1000	Intergenic	Intergenic	-27489	NM_001304359	4586	Hs.534332	NM_017511	ENSG00000215182	MUC5AC	MUC5|TBM|leB|mucin	"mucin 5AC, oligomeric mucus/gel-forming"	protein-coding	14.72	0	15.16333034	3.99E-13
chr11-2862	chr11	1226799	1227799	+	15.4	1000	Intergenic	Intergenic	-16996	NM_002458	727897	Hs.523395	NM_002458	ENSG00000117983	MUC5B	MG1|MUC-5B|MUC5|MUC9	"mucin 5B, oligomeric mucus/gel-forming"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-2865	chr11	1627836	1628836	+	15.4	1000	TTS (NM_001012708)	TTS (NM_001012708)	1357	NM_001012708	387266	Hs.532471	NM_001012708	ENSG00000196224	KRTAP5-3	KRTAP5-9|KRTAP5.3	keratin associated protein 5-3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-2868	chr11	1861508	1862508	+	14.1	1000	"intron (NM_001145841, intron 3 of 5)"	"intron (NM_001145841, intron 3 of 5)"	576	NM_001145841	7136	Hs.523403	NM_003282	ENSG00000130598	TNNI2	AMCD2B|DA2B|FSSV|fsTnI	"troponin I2, fast skeletal type"	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr11-2869	chr11	1865577	1870574	+	71	4997	Intergenic	L2b|LINE|L2	-6125	NM_002339	4046	Hs.56729	NM_002339	ENSG00000130592	LSP1	WP34|pp52	lymphocyte-specific protein 1	protein-coding	71.05	15.05	4.720930233	5.67E-20
chr11-289	chr11	110449642	110450923	+	23	1281	"exon (NM_001258418, exon 15 of 15)"	"exon (NM_001258418, exon 15 of 15)"	132491	NM_001258415	57569	Hs.6136	NM_020809	ENSG00000137727	ARHGAP20	RARHOGAP	Rho GTPase activating protein 20	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr11-2895	chr11	2429813	2433437	+	65.3	3624	"intron (NM_014555, intron 18 of 23)"	"intron (NM_014555, intron 18 of 23)"	9377	NM_001297659	10078	Hs.523424	NM_005706	ENSG00000184281	TSSC4	-	tumor suppressing subtransferable candidate 4	protein-coding	65.29	13.59	4.804267844	4.19E-19
chr11-2900	chr11	2571717	2573246	+	26.9	1529	"intron (NM_000218, intron 2 of 15)"	L1ME1|LINE|L1	89797	NM_181798	3784	Hs.95162	NM_000218	ENSG00000053918	KCNQ1	ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS	potassium voltage-gated channel subfamily Q member 1	protein-coding	26.88	2.91	9.237113402	7.03E-14
chr11-2907	chr11	2769934	2770934	+	14.7	1000	"intron (NM_000218, intron 11 of 15)"	"intron (NM_000218, intron 11 of 15)"	-49206	NR_002728	10984	Hs.604823	NR_002728	ENSG00000269821	KCNQ1OT1	KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012	KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr11-291	chr11	117186266	117188595	+	45.4	2329	promoter-TSS (NM_138973)	promoter-TSS (NM_138973)	-458	NM_138971	23621	Hs.504003	NM_012104	ENSG00000186318	BACE1	ASP2|BACE|HSPC104	beta-secretase 1	protein-coding	45.45	6.8	6.683823529	1.33E-17
chr11-2912	chr11	2857948	2858948	+	14.1	1000	"intron (NM_000218, intron 15 of 15)"	"intron (NM_000218, intron 15 of 15)"	24351	NR_130721	338653	Hs.639425	NR_130721	ENSG00000229414	KCNQ1-AS1	-	KCNQ1 antisense RNA 1	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr11-2914	chr11	2901642	2903052	+	19.8	1410	Intergenic	Intergenic	4648	NM_001122631	1028	Hs.106070	NM_000076	ENSG00000129757	CDKN1C	BWCR|BWS|KIP2|WBS|p57|p57Kip2	cyclin dependent kinase inhibitor 1C	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr11-2919	chr11	3652887	3653887	+	14.7	1000	"intron (NR_002720, intron 2 of 6)"	"intron (NR_002720, intron 2 of 6)"	5697	NR_002720	7221	Hs.131910	NR_002720	ENSG00000182048	TRPC2	-	"transient receptor potential cation channel subfamily C member 2, pseudogene"	pseudo	14.72	2.91	5.058419244	2.67E-05
chr11-2923	chr11	4516239	4518004	+	27.5	1765	Intergenic	HERVK13-int|LTR|ERVK	7012	NM_001005171	390036	Hs.553726	NM_001005171	ENSG00000196778	OR52K1	OR11-8	olfactory receptor family 52 subfamily K member 1	protein-coding	27.52	4.37	6.297482838	1.19E-10
chr11-2935	chr11	7260794	7261794	+	14.7	1000	Intergenic	L2a|LINE|L2	5297	NR_031683	100313774		NR_031683	ENSG00000221703	MIR302E	MIRN302E	microRNA 302e	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr11-2937	chr11	7522419	7523419	+	14.7	1000	"intron (NM_198474, intron 2 of 2)"	"intron (NM_198474, intron 2 of 2)"	-12077	NM_003621	8495	Hs.655714	NM_003621	ENSG00000166387	PPFIBP2	Cclp1	PPFIA binding protein 2	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr11-2938	chr11	7689032	7690032	+	15.4	1000	"intron (NM_001302826, intron 6 of 8)"	"intron (NM_001302826, intron 6 of 8)"	4590	NM_001302827	51700	Hs.414362	NM_016229	ENSG00000166394	CYB5R2	B5R.2	cytochrome b5 reductase 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-2941	chr11	8082192	8084586	+	32	2394	"intron (NR_120538, intron 1 of 2)"	"intron (NR_120538, intron 1 of 2)"	1804	NR_120537	101927917	Hs.680586	NR_120537	ENSG00000248332	TUB-AS1	-	TUB antisense RNA 1	ncRNA	32	4.85	6.597938144	5.03E-13
chr11-2943	chr11	8210008	8211008	+	13.4	1000	Intergenic	Tigger4|DNA|TcMar-Tigger	-19867	NM_001346690	79608	Hs.231850	NM_024557	ENSG00000166405	RIC3	AYST720|PRO1385	RIC3 acetylcholine receptor chaperone	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr11-2945	chr11	8335758	8336758	+	14.7	1000	Intergenic	Intergenic	-46076	NM_001270428	4004	Hs.654426	NM_002315	ENSG00000166407	LMO1	RBTN1|RHOM1|TTG1	LIM domain only 1	protein-coding	14.72	0	15.16333034	3.99E-13
chr11-2946	chr11	8357444	8358444	+	14.1	1000	Intergenic	Intergenic	-67762	NM_001270428	4004	Hs.654426	NM_002315	ENSG00000166407	LMO1	RBTN1|RHOM1|TTG1	LIM domain only 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr11-2947	chr11	8730748	8731748	+	14.1	1000	"intron (NM_005418, intron 14 of 22)"	MIRb|SINE|MIR	24262	NR_002977	677826	Hs.745552	NR_002977	ENSG00000212607	SNORA3B	ACA3-2|SNORA45|SNORA45B	"small nucleolar RNA, H/ACA box 3B"	snoRNA	14.08	1.94	7.257731959	6.14E-07
chr11-2951	chr11	9003611	9004611	+	14.7	1000	"3' UTR (NM_020645, exon 7 of 7)"	"3' UTR (NM_020645, exon 7 of 7)"	-17553	NM_001286095	56674	Hs.501853	NM_020644	ENSG00000175348	TMEM9B	C11orf15	TMEM9 domain family member B	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-2952	chr11	9054070	9055070	+	14.1	1000	"intron (NM_020974, intron 16 of 21)"	"intron (NM_020974, intron 16 of 21)"	-28974	NM_020645	56675	Hs.523467	NM_020645	ENSG00000175352	NRIP3	C11orf14|NY-SAR-105	nuclear receptor interacting protein 3	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr11-2955	chr11	9121513	9122513	+	15.4	1000	Intergenic	AluSx1|SINE|Alu	6103	NR_027713	283102	Hs.689472	NR_027713	ENSG00000213538	KRT8P41	-	keratin 8 pseudogene 41	pseudo	15.36	2.91	5.278350515	4.98E-06
chr11-2963	chr11	10417915	10418915	+	14.1	1000	"intron (NR_103765, intron 2 of 3)"	"intron (NR_103765, intron 2 of 3)"	-53453	NM_001172431	272	Hs.501890	NM_000480	ENSG00000133805	AMPD3	-	adenosine monophosphate deaminase 3	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr11-2969	chr11	10930968	10931968	+	14.7	1000	Intergenic	Intergenic	51704	NR_034137	729013	Hs.726427	NR_034137	ENSG00000247271	ZBED5-AS1	-	ZBED5 antisense RNA 1	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr11-2972	chr11	11052642	11053642	+	15.4	1000	Intergenic	AluJo|SINE|Alu	173378	NR_034137	729013	Hs.726427	NR_034137	ENSG00000247271	ZBED5-AS1	-	ZBED5 antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr11-2976	chr11	11279419	11280419	+	14.7	1000	Intergenic	LTR88b|LTR|Gypsy?	94985	NM_001256686	283106	Hs.654675	NM_001256686	ENSG00000254598	CSNK2A3	CSNK2A1P	casein kinase 2 alpha 3	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr11-2981	chr11	11472695	11473695	+	14.7	1000	"intron (NM_198516, intron 1 of 10)"	L2a|LINE|L2	-98291	NM_001256686	283106	Hs.654675	NM_001256686	ENSG00000254598	CSNK2A3	CSNK2A1P	casein kinase 2 alpha 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-2983	chr11	11989716	11992519	+	44.8	2803	"intron (NM_001018057, intron 3 of 6)"	"intron (NM_001018057, intron 3 of 6)"	39069	NM_001018057	27122	Hs.292156	NM_013253	ENSG00000050165	DKK3	REIC|RIG	dickkopf WNT signaling pathway inhibitor 3	protein-coding	44.81	5.82	7.699312715	1.25E-19
chr11-2985	chr11	12429658	12430658	+	14.7	1000	"intron (NM_018222, intron 1 of 12)"	"intron (NM_018222, intron 1 of 12)"	31132	NM_018222	55742	Hs.432914	NM_018222	ENSG00000197702	PARVA	CH-ILKBP|MXRA2	parvin alpha	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-2987	chr11	12447853	12448853	+	14.1	1000	"intron (NM_018222, intron 1 of 12)"	L2b|LINE|L2	49327	NM_018222	55742	Hs.432914	NM_018222	ENSG00000197702	PARVA	CH-ILKBP|MXRA2	parvin alpha	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr11-2990	chr11	12712542	12713542	+	14.7	1000	"intron (NM_021961, intron 2 of 12)"	"intron (NM_021961, intron 2 of 12)"	17073	NM_021961	7003	Hs.655331	NM_021961	ENSG00000187079	TEAD1	AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1	TEA domain transcription factor 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-2992	chr11	12742251	12743667	+	22.4	1416	"intron (NM_021961, intron 2 of 12)"	L2a|LINE|L2	46990	NM_021961	7003	Hs.655331	NM_021961	ENSG00000187079	TEAD1	AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1	TEA domain transcription factor 1	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr11-2993	chr11	12749561	12750975	+	21.8	1414	"intron (NM_021961, intron 2 of 12)"	"intron (NM_021961, intron 2 of 12)"	54299	NM_021961	7003	Hs.655331	NM_021961	ENSG00000187079	TEAD1	AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1	TEA domain transcription factor 1	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr11-2996	chr11	12852620	12854478	+	32.6	1858	"intron (NM_021961, intron 3 of 12)"	"intron (NM_021961, intron 3 of 12)"	157546	NR_038904	100506305	Hs.153408	NR_038904	ENSG00000251381	LINC00958	-	long intergenic non-protein coding RNA 958	ncRNA	32.64	3.88	8.412371134	3.92E-15
chr11-2998	chr11	12913525	12914875	+	16.6	1350	"intron (NM_021961, intron 9 of 12)"	AluSx1|SINE|Alu	96895	NR_038904	100506305	Hs.153408	NR_038904	ENSG00000251381	LINC00958	-	long intergenic non-protein coding RNA 958	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr11-3000	chr11	13058779	13060150	+	17.9	1371	Intergenic	MIRb|SINE|MIR	28494	NM_001080521	644943	Hs.134650	NM_001080521	ENSG00000189431	RASSF10	-	Ras association domain family member 10	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr11-3005	chr11	13497614	13498614	+	15.4	1000	Intergenic	Intergenic	-13270	NM_001297741	84280	Hs.332382	NM_032320	ENSG00000148925	BTBD10	GMRP-1|GMRP1	BTB domain containing 10	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-3007	chr11	13871384	13872886	+	23	1502	Intergenic	Intergenic	74275	NR_135052	101928132	Hs.568970	NR_135052	ENSG00000254438	LOC101928132	-	uncharacterized LOC101928132	ncRNA	23.04	4.85	4.750515464	1.15E-07
chr11-3008	chr11	13980395	13981395	+	15.4	1000	Intergenic	L2a|LINE|L2	-3289	NM_006108	10418	Hs.643864	NM_006108	ENSG00000262655	SPON1	VSGP/F-spondin|f-spondin	spondin 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-3011	chr11	14248274	14249274	+	14.1	1000	"intron (NM_006108, intron 7 of 16)"	AluJr|SINE|Alu	131257	NM_001177315	22800	Hs.502004	NM_012250	ENSG00000133818	RRAS2	TC21	related RAS viral (r-ras) oncogene homolog 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr11-3014	chr11	14396131	14397131	+	13.4	1000	Intergenic	Intergenic	-10579	NM_001177314	22800	Hs.502004	NM_012250	ENSG00000133818	RRAS2	TC21	related RAS viral (r-ras) oncogene homolog 2	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr11-3017	chr11	14996143	14997574	+	17.9	1431	Intergenic	Intergenic	-3026	NM_001033952	796	Hs.37058	NM_001741	ENSG00000110680	CALCA	CALC1|CGRP|CGRP-I|CGRP1|CT|KC|PCT	calcitonin related polypeptide alpha	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr11-3019	chr11	15225132	15226132	+	14.7	1000	"intron (NM_001278315, intron 6 of 12)"	"intron (NM_001278315, intron 6 of 12)"	54984	NM_001278313	387755	Hs.591997	NM_001031853	ENSG00000188487	INSC	-	inscuteable homolog (Drosophila)	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-3020	chr11	15724956	15725956	+	14.1	1000	"intron (NM_001293172, intron 1 of 2)"	"intron (NM_001293172, intron 1 of 2)"	60025	NM_001293172	102724957	Hs.512245	NM_001293172	ENSG00000254695	LOC102724957	-	uncharacterized LOC102724957	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr11-3023	chr11	15803932	15804932	+	15.4	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	139001	NM_001293172	102724957	Hs.512245	NM_001293172	ENSG00000254695	LOC102724957	-	uncharacterized LOC102724957	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr11-3024	chr11	17531122	17532122	+	14.7	1000	"intron (NM_153676, intron 17 of 26)"	"intron (NM_153676, intron 17 of 26)"	-33230	NM_000352	6833	Hs.54470	NM_000352	ENSG00000006071	ABCC8	ABC36|HHF1|HI|HRINS|MRP8|PHHI|SUR|SUR1|SUR1delta2|TNDM2	ATP binding cassette subfamily C member 8	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr11-3025	chr11	17550947	17551947	+	14.7	1000	"intron (NR_123738, intron 4 of 19)"	"intron (NR_123738, intron 4 of 19)"	14516	NM_153676	10083	Hs.502072	NM_005709	ENSG00000006611	USH1C	AIE-75|DFNB18|DFNB18A|NY-CO-37|NY-CO-38|PDZ-45|PDZ-73|PDZ-73/NY-CO-38|PDZ73|PDZD7C|ush1cpst	USH1 protein network component harmonin	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr11-3026	chr11	17560225	17563061	+	35.2	2836	"intron (NR_123738, intron 1 of 19)"	AluJo|SINE|Alu	4320	NM_153676	10083	Hs.502072	NM_005709	ENSG00000006611	USH1C	AIE-75|DFNB18|DFNB18A|NY-CO-37|NY-CO-38|PDZ-45|PDZ-73|PDZ-73/NY-CO-38|PDZ73|PDZD7C|ush1cpst	USH1 protein network component harmonin	protein-coding	35.2	8.74	4.027459954	4.36E-09
chr11-3031	chr11	17733324	17736171	+	33.9	2847	Intergenic	AluSx|SINE|Alu	-6363	NM_002478	4654	Hs.181768	NM_002478	ENSG00000129152	MYOD1	MYF3|MYOD|PUM|bHLHc1	myogenic differentiation 1	protein-coding	33.92	6.8	4.988235294	1.08E-10
chr11-3047	chr11	19463287	19464287	+	15.4	1000	"intron (NM_001111018, intron 1 of 37)"	"intron (NM_001111018, intron 1 of 37)"	64989	NR_049725	100874012	Hs.434602	NR_049725	ENSG00000255043	NAV2-AS5	-	NAV2 antisense RNA 5	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr11-3049	chr11	19472456	19473456	+	14.7	1000	"intron (NM_001111018, intron 1 of 37)"	"intron (NM_001111018, intron 1 of 37)"	55820	NR_049725	100874012	Hs.434602	NR_049725	ENSG00000255043	NAV2-AS5	-	NAV2 antisense RNA 5	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr11-3052	chr11	19935520	19936520	+	14.7	1000	"intron (NM_182964, intron 6 of 37)"	LTR85b|LTR|Gypsy?	-108082	NM_001111019	89797	Hs.64341	NM_145117	ENSG00000166833	NAV2	HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2	neuron navigator 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr11-3055	chr11	20115184	20116184	+	14.7	1000	"intron (NM_001111019, intron 19 of 27)"	"intron (NM_001111019, intron 19 of 27)"	-44835	NR_046672	100874014	Hs.557916	NR_046672	ENSG00000254453	NAV2-AS2	-	NAV2 antisense RNA 2	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr11-3057	chr11	20182790	20186158	+	46.7	3368	Intergenic	Intergenic	-2604	NM_001029865	120237	Hs.558604	NM_001029865	ENSG00000109851	DBX1	-	developing brain homeobox 1	protein-coding	46.73	8.25	5.664242424	7.02E-16
chr11-3064	chr11	20631894	20632894	+	14.7	1000	"intron (NM_004211, intron 5 of 15)"	MER20|DNA|hAT-Charlie	11448	NM_004211	9152	Hs.136557	NM_004211	ENSG00000165970	SLC6A5	GLYT-2|GLYT2|HKPX3|NET1	solute carrier family 6 member 5	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr11-3067	chr11	26362233	26363233	+	14.7	1000	"intron (NM_031418, intron 1 of 26)"	"intron (NM_031418, intron 1 of 26)"	9055	NM_031418	63982	Hs.91791	NM_031418	ENSG00000134343	ANO3	C11orf25|DYT23|DYT24|GENX-3947|TMEM16C	anoctamin 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-3068	chr11	27661968	27662968	+	15.4	1000	"intron (NR_033315, intron 3 of 6)"	"intron (NR_033315, intron 3 of 6)"	-6294	NR_102708	101410541	Hs.471439	NR_102708	ENSG00000254934	LINC00678	-	long intergenic non-protein coding RNA 678	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr11-3069	chr11	31834428	31847093	+	233.6	12665	"intron (NR_033971, intron 1 of 2)"	"intron (NR_033971, intron 1 of 2)"	-1251	NM_001258462	5080	Hs.270303	NM_000280	ENSG00000007372	PAX6	AN|AN2|D11S812E|FVH1|MGDA|WAGR	paired box 6	protein-coding	233.63	32.52	7.184194342	7.98E-90
chr11-3075	chr11	32059816	32060816	+	14.1	1000	"intron (NR_120526, intron 1 of 2)"	MLT1K|LTR|ERVL-MaLR	2548	NR_120527	100506675	Hs.446169	NR_120526	ENSG00000254584	LOC100506675	-	uncharacterized LOC100506675	ncRNA	14.08	0	14.5040551	3.99E-13
chr11-3076	chr11	32247402	32248402	+	15.4	1000	Intergenic	Intergenic	-82444	NR_132770	106635521		NR_132770		SNORA88	-	"small nucleolar RNA, H/ACA box 88"	snoRNA	15.36	1.94	7.917525773	7.67E-08
chr11-3077	chr11	33396956	33399125	+	30.1	2169	Intergenic	CpG	118163	NM_001278162	10114	Hs.201918	NM_005734	ENSG00000110422	HIPK3	DYRK6|FIST3|PKY|YAK1	homeodomain interacting protein kinase 3	protein-coding	30.08	4.85	6.202061856	2.13E-11
chr11-3082	chr11	33437473	33438473	+	14.7	1000	Intergenic	Intergenic	-125904	NM_012194	25758	Hs.502266	NM_012194	ENSG00000110427	KIAA1549L	C11orf41|C11orf69|G2	KIAA1549 like	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr11-3089	chr11	34199443	34200443	+	15.4	1000	"intron (NM_145804, intron 3 of 16)"	"intron (NM_145804, intron 3 of 16)"	72832	NM_001144030	55226	Hs.577281	NM_024662	ENSG00000135372	NAT10	ALP|NET43	N-acetyltransferase 10	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-3091	chr11	34225748	34226748	+	15.4	1000	"intron (NM_145804, intron 1 of 16)"	"intron (NM_145804, intron 1 of 16)"	99137	NM_001144030	55226	Hs.577281	NM_024662	ENSG00000135372	NAT10	ALP|NET43	N-acetyltransferase 10	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-3092	chr11	34232215	34233589	+	21.1	1374	"intron (NM_145804, intron 1 of 16)"	AluJb|SINE|Alu	105791	NM_001144030	55226	Hs.577281	NM_024662	ENSG00000135372	NAT10	ALP|NET43	N-acetyltransferase 10	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr11-3093	chr11	34279997	34280997	+	15.4	1000	"intron (NM_145804, intron 1 of 16)"	"intron (NM_145804, intron 1 of 16)"	99058	NM_145804	25841	Hs.23361	NM_145804	ENSG00000166016	ABTB2	ABTB2A|BTBD22	ankyrin repeat and BTB domain containing 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr11-3095	chr11	34319418	34322230	+	44.2	2812	"intron (NM_145804, intron 1 of 16)"	"intron (NM_145804, intron 1 of 16)"	58731	NM_145804	25841	Hs.23361	NM_145804	ENSG00000166016	ABTB2	ABTB2A|BTBD22	ankyrin repeat and BTB domain containing 2	protein-coding	44.17	9.71	4.548918641	1.81E-12
chr11-3096	chr11	34349369	34350369	+	15.4	1000	"intron (NM_145804, intron 1 of 16)"	"intron (NM_145804, intron 1 of 16)"	29686	NM_145804	25841	Hs.23361	NM_145804	ENSG00000166016	ABTB2	ABTB2A|BTBD22	ankyrin repeat and BTB domain containing 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-3097	chr11	34545817	34547130	+	18.6	1313	Intergenic	Intergenic	-11126	NM_001243080	2001	Hs.11713	NM_001422	ENSG00000135374	ELF5	ESE2	E74 like ETS transcription factor 5	protein-coding	18.56	1.46	12.71232877	2.41E-11
chr11-31	chr11	46939001	46940255	+	26.2	1254	"intron (NM_002334, intron 1 of 37)"	CpG	545	NM_002334	4038	Hs.4930	NM_002334	ENSG00000134569	LRP4	CLSS|CMS17|LRP-4|LRP10|MEGF7|SOST2	LDL receptor related protein 4	protein-coding	26.24	3.88	6.762886598	1.00E-10
chr11-3101	chr11	34615726	34616726	+	14.7	1000	Intergenic	Intergenic	-26362	NM_012153	26298	Hs.653859	NM_012153	ENSG00000135373	EHF	ESE3|ESE3B|ESEJ	ETS homologous factor	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr11-3103	chr11	34682563	34683563	+	15.4	1000	"3' UTR (NM_001206615, exon 8 of 8)"	"3' UTR (NM_001206615, exon 8 of 8)"	29052	NM_001206616	26298	Hs.653859	NM_012153	ENSG00000135373	EHF	ESE3|ESE3B|ESEJ	ETS homologous factor	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr11-3108	chr11	35319188	35320455	+	19.2	1267	"intron (NM_001252652, intron 7 of 11)"	"intron (NM_001252652, intron 7 of 11)"	121284	NM_004171	6506	Hs.502338	NM_004171	ENSG00000110436	SLC1A2	EAAT2|EIEE41|GLT-1|HBGT	solute carrier family 1 member 2	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr11-3119	chr11	35634784	35635784	+	14.1	1000	Intergenic	MLT1A0|LTR|ERVL-MaLR	-4451	NM_014344	24147	Hs.39384	NM_014344	ENSG00000179431	FJX1	-	four jointed box 1	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr11-3122	chr11	35851473	35852473	+	14.1	1000	Intergenic	LTR33|LTR|ERVL	-113558	NM_174902	143458	Hs.745134	NM_174902	ENSG00000179241	LDLRAD3	LRAD3	low density lipoprotein receptor class A domain containing 3	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr11-3123	chr11	36091498	36092498	+	15.4	1000	"intron (NR_135064, intron 1 of 1)"	"intron (NR_135064, intron 1 of 1)"	7453	NR_135064	101928510	Hs.675857	NR_135064		LOC101928510	-	uncharacterized LOC101928510	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr11-3125	chr11	36202757	36204804	+	31.4	2047	"intron (NM_174902, intron 4 of 5)"	"intron (NM_174902, intron 4 of 5)"	-104329	NR_135064	101928510	Hs.675857	NR_135064		LOC101928510	-	uncharacterized LOC101928510	ncRNA	31.36	2.91	10.7766323	6.73E-17
chr11-313	chr11	128562344	128563344	+	19.8	1000	promoter-TSS (NM_001271010)	promoter-TSS (NM_001271010)	-967	NM_001167681	2313	Hs.504281	NM_002017	ENSG00000151702	FLI1	EWSR2|SIC-1	"Fli-1 proto-oncogene, ETS transcription factor"	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr11-3133	chr11	36398586	36399586	+	15.4	1000	"intron (NM_024841, intron 2 of 9)"	CpG-4034	1551	NM_001160168	79899	Hs.19987	NM_024841	ENSG00000135362	PRR5L	PROTOR2	proline rich 5 like	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-3136	chr11	44040323	44041323	+	14.7	1000	Intergenic	L1MB7|LINE|L1	-28708	NM_001031854	390110	Hs.558851	NM_001031854	ENSG00000205126	ACCSL	-	1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr11-3138	chr11	44075890	44077387	+	22.4	1497	"intron (NM_001031854, intron 8 of 13)"	"intron (NM_001031854, intron 8 of 13)"	7107	NM_001031854	390110	Hs.558851	NM_001031854	ENSG00000205126	ACCSL	-	1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr11-314	chr11	128812225	128813904	+	28.2	1679	"5' UTR (NM_001251964, exon 1 of 2)"	"5' UTR (NM_001251964, exon 1 of 2)"	230	NM_001251964	63970	Hs.160953	NM_022112	ENSG00000120471	TP53AIP1	P53AIP1	tumor protein p53 regulated apoptosis inducing protein 1	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr11-3140	chr11	44101279	44102279	+	15.4	1000	"intron (NM_032592, intron 10 of 14)"	FLAM_C|SINE|Alu	13967	NM_032592	84680	Hs.126706	NM_032592	ENSG00000110455	ACCS	ACS|PHACS	1-aminocyclopropane-1-carboxylate synthase homolog (inactive)	protein-coding	15.36	0	15.82260557	1.26E-14
chr11-3142	chr11	44322883	44323883	+	14.7	1000	"intron (NM_021926, intron 1 of 3)"	"intron (NM_021926, intron 1 of 3)"	8333	NM_021926	60529	Hs.436055	NM_021926	ENSG00000052850	ALX4	CRS5|FND2	ALX homeobox 4	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr11-3146	chr11	44838011	44839011	+	15.4	1000	"intron (NM_130783, intron 1 of 8)"	"intron (NM_130783, intron 1 of 8)"	52535	NM_130783	90139	Hs.385634	NM_130783	ENSG00000157570	TSPAN18	TSPAN	tetraspanin 18	protein-coding	15.36	0	15.82260557	1.26E-14
chr11-3153	chr11	45178507	45179507	+	15.4	1000	"intron (NM_001256696, intron 1 of 6)"	MER1B|DNA|hAT-Charlie	10113	NM_001256695	56981	Hs.178715	NM_020229	ENSG00000019485	PRDM11	PFM8	PR/SET domain 11	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-3160	chr11	45452182	45455665	+	52.5	3483	Intergenic	MIR|SINE|MIR	60975	NR_122071	399886	Hs.559970	NR_122071	ENSG00000255267	LOC399886	-	uncharacterized LOC399886	ncRNA	52.49	8.74	6.005720824	6.11E-19
chr11-3163	chr11	45667264	45668264	+	15.4	1000	Intergenic	Intergenic	19442	NM_003654	8534	Hs.104576	NM_003654	ENSG00000175264	CHST1	C6ST|GST-1|KS6ST|KSGal6ST|KSST	carbohydrate sulfotransferase 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr11-3164	chr11	45682875	45683875	+	14.7	1000	"intron (NM_003654, intron 1 of 3)"	"intron (NM_003654, intron 1 of 3)"	3831	NM_003654	8534	Hs.104576	NM_003654	ENSG00000175264	CHST1	C6ST|GST-1|KS6ST|KSGal6ST|KSST	carbohydrate sulfotransferase 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-317	chr11	134445855	134447507	+	33.3	1652	Intergenic	Intergenic	140305	NR_033852	283177	Hs.504390	NR_033852		LOC283177	-	uncharacterized LOC283177	ncRNA	33.28	5.82	5.718213058	4.04E-12
chr11-318	chr11	1989745	1991233	+	21.1	1488	Intergenic	Intergenic	19928	NR_132974	106635549		NR_132974		SNORD131	-	"small nucleolar RNA, C/D box 131"	snoRNA	21.12	3.4	6.211764706	2.41E-08
chr11-3180	chr11	48000706	48004211	+	62.1	3505	"5' UTR (NM_001098503, exon 1 of 9)"	"5' UTR (NM_001098503, exon 1 of 9)"	348	NM_002843	5795	Hs.318547	NM_002843	ENSG00000149177	PTPRJ	CD148|DEP1|HPTPeta|R-PTP-ETA|SCC1	"protein tyrosine phosphatase, receptor type J"	protein-coding	62.09	9.71	6.394438723	8.28E-23
chr11-3184	chr11	56929919	56931900	+	30.1	1981	Intergenic	Intergenic	-18312	NM_001005210	219527	Hs.199853	NM_001005210	ENSG00000183908	LRRC55	-	leucine rich repeat containing 55	protein-coding	30.08	4.85	6.202061856	2.13E-11
chr11-3189	chr11	57209737	57210737	+	15.4	1000	Intergenic	Tigger3b|DNA|TcMar-Tigger	-15184	NM_017611	29015	Hs.99962	NM_014096	ENSG00000134802	SLC43A3	EEG1|FOAP-13|PRO1659|SEEEG-1	solute carrier family 43 member 3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-3190	chr11	57750856	57751856	+	16	1000	Intergenic	L2|LINE|L2	-39997	NM_001005212	219956	Hs.689841	NM_001005212	ENSG00000186509	OR9Q1	-	olfactory receptor family 9 subfamily Q member 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr11-3191	chr11	58206726	58207726	+	14.1	1000	"exon (NM_001004733, exon 1 of 1)"	"exon (NM_001004733, exon 1 of 1)"	420	NM_001004733	390191	Hs.553754	NM_001004733	ENSG00000172362	OR5B12	OR11-241|OR5B12P|OR5B16|OST743	olfactory receptor family 5 subfamily B member 12	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr11-3192	chr11	58934578	58935578	+	14.7	1000	Intergenic	L1MD1|LINE|L1	-3825	NM_001300727	23220	Hs.523696	NM_015177	ENSG00000110042	DTX4	RNF155	deltex E3 ubiquitin ligase 4	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-3194	chr11	58980711	58981977	+	19.8	1266	promoter-TSS (NM_001039396)	promoter-TSS (NM_001039396)	-850	NM_001039396	219972	Hs.744920	NM_001039396	ENSG00000197629	MPEG1	MPG1|MPS1|Mpg-1	macrophage expressed 1	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr11-3196	chr11	59522546	59523546	+	15.4	1000	"5' UTR (NM_001178040, exon 1 of 10)"	"5' UTR (NM_001178040, exon 1 of 10)"	514	NM_004177	6809	Hs.180711	NM_004177	ENSG00000166900	STX3	STX3A	syntaxin 3	protein-coding	15.36	0	15.82260557	1.26E-14
chr11-3197	chr11	59525364	59527211	+	28.2	1847	"intron (NM_004177, intron 1 of 10)"	L2b|LINE|L2	3755	NM_004177	6809	Hs.180711	NM_004177	ENSG00000166900	STX3	STX3A	syntaxin 3	protein-coding	28.16	4.37	6.443935927	1.84E-11
chr11-3198	chr11	59619468	59620468	+	15.4	1000	TTS (NM_001062)	TTS (NM_001062)	-6994	NM_005142	2694	Hs.110014	NM_005142	ENSG00000134812	GIF	IF|IFMH|INF|TCN3	gastric intrinsic factor	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr11-3201	chr11	60282062	60283062	+	15.4	1000	promoter-TSS (NM_001278320)	promoter-TSS (NM_001278320)	-324	NM_001012417	503497	Hs.523704	NM_001012417	ENSG00000204979	MS4A13	-	membrane spanning 4-domains A13	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-3205	chr11	61365345	61366345	+	14.1	1000	"intron (NR_110189, intron 2 of 3)"	"intron (NR_110189, intron 2 of 3)"	9879	NR_110189	101927495	Hs.553866	NR_110189	ENSG00000250230	LOC101927495	-	uncharacterized LOC101927495	ncRNA	14.08	0	14.5040551	3.99E-13
chr11-3207	chr11	61435390	61436390	+	15.4	1000	Intergenic	Intergenic	-12015	NM_006133	747	Hs.241564	NM_006133	ENSG00000134780	DAGLA	C11orf11|DAGL(ALPHA)|DAGLALPHA|NSDDR	diacylglycerol lipase alpha	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-3214	chr11	61940323	61941323	+	14.1	1000	Intergenic	Intergenic	-16887	NM_006552	10648	Hs.202686	NM_006552	ENSG00000168515	SCGB1D1	LIPA|LPHA|LPNA	secretoglobin family 1D member 1	protein-coding	14.08	0	14.5040551	3.99E-13
chr11-3215	chr11	61951646	61952646	+	15.4	1000	Intergenic	AluSx1|SINE|Alu	-5564	NM_006552	10648	Hs.202686	NM_006552	ENSG00000168515	SCGB1D1	LIPA|LPHA|LPNA	secretoglobin family 1D member 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-3218	chr11	62005869	62006869	+	15.4	1000	Intergenic	Intergenic	-3355	NM_006551	10647	Hs.204096	NM_006551	ENSG00000124935	SCGB1D2	LIPB|LPHB|LPNB	secretoglobin family 1D member 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-3220	chr11	62279183	62280183	+	15.4	1000	"intron (NM_024060, intron 4 of 5)"	LTR33|LTR|ERVL	33476	NM_001346446	79026	Hs.502756	NM_001620	ENSG00000124942	AHNAK	AHNAKRS|PM227	AHNAK nucleoprotein	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-3228	chr11	63792348	63793348	+	15.4	1000	"intron (NM_014067, intron 3 of 10)"	"intron (NM_014067, intron 3 of 10)"	39523	NM_017670	55611	Hs.473788	NM_017670	ENSG00000167770	OTUB1	HSPC263|OTB1|OTU1	"OTU deubiquitinase, ubiquitin aldehyde binding 1"	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr11-3234	chr11	64301305	64303307	+	31.4	2002	Intergenic	Intergenic	-20767	NM_018484	55867	Hs.220844	NM_018484	ENSG00000168065	SLC22A11	OAT4|hOAT4	solute carrier family 22 member 11	protein-coding	31.36	4.85	6.465979381	3.34E-12
chr11-324	chr11	7567741	7571029	+	46.7	3288	"intron (NM_003621, intron 1 of 23)"	MIRb|SINE|MIR	34389	NM_003621	8495	Hs.655714	NM_003621	ENSG00000166387	PPFIBP2	Cclp1	PPFIA binding protein 2	protein-coding	46.73	7.28	6.418956044	1.62E-17
chr11-3243	chr11	65123580	65124580	+	13.4	1000	"exon (NM_145719, exon 2 of 2)"	"exon (NM_145719, exon 2 of 2)"	1798	NM_145719	220359	Hs.632121	NM_145719	ENSG00000173825	TIGD3	-	tigger transposable element derived 3	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr11-3259	chr11	66687596	66688596	+	14.7	1000	"intron (NM_001040716, intron 3 of 22)"	"intron (NM_001040716, intron 3 of 22)"	-12756	NM_022172	5091	Hs.89890	NM_000920	ENSG00000173599	PC	PCB	pyruvate carboxylase	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-326	chr11	9269225	9270737	+	28.2	1512	"intron (NM_001243254, intron 1 of 22)"	AluJb|SINE|Alu	16892	NM_001243254	23258	Hs.501857	NM_015213	ENSG00000184014	DENND5A	RAB6IP1	DENN domain containing 5A	protein-coding	28.16	5.34	5.27340824	7.39E-10
chr11-3268	chr11	67138442	67145181	+	103.7	6739	promoter-TSS (NM_013246)	promoter-TSS (NM_013246)	-163	NM_001166212	23529	Hs.502977	NM_013246	ENSG00000175505	CLCF1	BSF-3|BSF3|CISS2|CLC|NNT-1|NNT1|NR6	cardiotrophin-like cytokine factor 1	protein-coding	103.69	12.62	8.216323296	3.22E-45
chr11-327	chr11	9360770	9362028	+	24.3	1258	Intergenic	AluSp|SINE|Alu	-25084	NR_028491	440026	Hs.594563	NM_015012	ENSG00000166471	TMEM41B	-	transmembrane protein 41B	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr11-3273	chr11	67990048	67991048	+	14.7	1000	Intergenic	AluSp|SINE|Alu	-9309	NM_001300909	51111	Hs.632120	NM_016028	ENSG00000110066	KMT5B	CGI-85|CGI85|SUV420H1	lysine methyltransferase 5B	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-3276	chr11	68407971	68408971	+	15.4	1000	Intergenic	ERV3-16A3_I-int|LTR|ERVL	-43472	NM_015973	51083	Hs.278959	NM_015973	ENSG00000069482	GAL	ETL8|GAL-GMAP|GALN|GLNN|GMAP	galanin and GMAP prepropeptide	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr11-3283	chr11	68923448	68924448	+	14.7	1000	"intron (NR_104161, intron 2 of 2)"	"intron (NR_104161, intron 2 of 2)"	15082	NR_104161	338694	Hs.564235	NR_104161	ENSG00000261070	LOC338694	-	uncharacterized LOC338694	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr11-3287	chr11	68989354	68990618	+	16.6	1264	Intergenic	AluSp|SINE|Alu	-50956	NR_104161	338694	Hs.564235	NR_104161	ENSG00000261070	LOC338694	-	uncharacterized LOC338694	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr11-329	chr11	11321510	11322792	+	25	1282	"intron (NM_198516, intron 9 of 10)"	"intron (NM_198516, intron 9 of 10)"	52753	NM_001256686	283106	Hs.654675	NM_001256686	ENSG00000254598	CSNK2A3	CSNK2A1P	casein kinase 2 alpha 3	protein-coding	24.96	2.91	8.577319588	5.77E-12
chr11-3301	chr11	69517026	69518595	+	23.7	1569	"intron (NM_005117, intron 2 of 2)"	"intron (NM_005117, intron 2 of 2)"	1296	NM_005117	9965	Hs.249200	NM_005117	ENSG00000162344	FGF19	-	fibroblast growth factor 19	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr11-3304	chr11	69788628	69789628	+	15.4	1000	Intergenic	Intergenic	120902	NR_120530	101928443	Hs.313468	NR_120529	ENSG00000248844	LOC101928443	-	uncharacterized LOC101928443	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr11-3305	chr11	69913601	69914601	+	15.4	1000	Intergenic	Intergenic	-2624	NR_120529	101928443	Hs.313468	NR_120529	ENSG00000248844	LOC101928443	-	uncharacterized LOC101928443	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr11-3309	chr11	69952203	69953203	+	14.7	1000	"intron (NM_018043, intron 5 of 25)"	"intron (NM_018043, intron 5 of 25)"	21187	NR_030691	55107	Hs.503074	NM_018043	ENSG00000131620	ANO1	DOG1|ORAOV2|TAOS2|TMEM16A	anoctamin 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr11-3310	chr11	69955974	69956974	+	13.4	1000	"intron (NM_018043, intron 6 of 25)"	AluSc8|SINE|Alu	24958	NR_030691	55107	Hs.503074	NM_018043	ENSG00000131620	ANO1	DOG1|ORAOV2|TAOS2|TMEM16A	anoctamin 1	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr11-3311	chr11	69961994	69962994	+	14.7	1000	"intron (NM_018043, intron 7 of 25)"	"intron (NM_018043, intron 7 of 25)"	30978	NR_030691	55107	Hs.503074	NM_018043	ENSG00000131620	ANO1	DOG1|ORAOV2|TAOS2|TMEM16A	anoctamin 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-3318	chr11	70077959	70078959	+	14.7	1000	Intergenic	Intergenic	29190	NM_003824	8772	Hs.86131	NM_003824	ENSG00000168040	FADD	GIG3|MORT1	Fas associated via death domain	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-3322	chr11	70257812	70258812	+	15.4	1000	"intron (NM_005231, intron 5 of 17)"	AluJo|SINE|Alu	13700	NM_138565	2017	Hs.596164	NM_005231	ENSG00000085733	CTTN	EMS1	cortactin	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-3324	chr11	70324659	70325659	+	14.1	1000	"intron (NR_110766, intron 8 of 8)"	"intron (NR_110766, intron 8 of 8)"	80547	NM_138565	2017	Hs.596164	NM_005231	ENSG00000085733	CTTN	EMS1	cortactin	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr11-3325	chr11	70340107	70344832	+	58.9	4725	"intron (NM_012309, intron 18 of 22)"	"intron (NM_012309, intron 18 of 22)"	97857	NM_138565	2017	Hs.596164	NM_005231	ENSG00000085733	CTTN	EMS1	cortactin	protein-coding	58.89	10.19	5.779195289	2.14E-20
chr11-3326	chr11	70450094	70451094	+	14.7	1000	"intron (NM_012309, intron 14 of 22)"	"intron (NM_012309, intron 14 of 22)"	-26605	NR_046567	100874198	Hs.656610	NR_046567	ENSG00000226627	SHANK2-AS1	-	SHANK2 antisense RNA 1	ncRNA	14.72	0	15.16333034	3.99E-13
chr11-3329	chr11	70799135	70801902	+	47.4	2767	"intron (NM_012309, intron 7 of 22)"	"intron (NM_012309, intron 7 of 22)"	-82045	NR_037437	100500844		NR_037437	ENSG00000263744	MIR3664	mir-3664	microRNA 3664	ncRNA	47.37	9.71	4.878475798	1.65E-14
chr11-3332	chr11	71051421	71053179	+	26.9	1758	Intergenic	AluSx|SINE|Alu	82100	NR_038862	399923	Hs.128191	NM_001001680	ENSG00000172900	FLJ42102	-	uncharacterized LOC399923	ncRNA	26.88	4.85	5.542268041	7.61E-10
chr11-3333	chr11	72235639	72236639	+	14.1	1000	Intergenic	Intergenic	-45561	NR_126364	101928555	Hs.376950	NR_126364	ENSG00000227467	LINC01537	-	long intergenic non-protein coding RNA 1537	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr11-3339	chr11	74798248	74799248	+	15.4	1000	Intergenic	Intergenic	2010	NM_001005285	341152	Hs.554515	NM_001005285	ENSG00000171561	OR2AT4	OR11-265	olfactory receptor family 2 subfamily AT member 4	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr11-334	chr11	32052528	32053794	+	22.4	1266	Intergenic	Intergenic	9703	NR_120527	100506675	Hs.446169	NR_120526	ENSG00000254584	LOC100506675	-	uncharacterized LOC100506675	ncRNA	22.4	5.34	4.194756554	1.97E-06
chr11-3348	chr11	75453310	75454610	+	19.8	1300	Intergenic	L2c|LINE|L2	25096	NM_025098	80168	Hs.288568	NM_025098	ENSG00000166391	MOGAT2	DGAT2L5|DGAT2L5.|MGAT2|hDC5	monoacylglycerol O-acyltransferase 2	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr11-3350	chr11	75907128	75908128	+	14.7	1000	"exon (NM_004626, exon 2 of 5)"	"exon (NM_004626, exon 2 of 5)"	9946	NM_004626	7481	Hs.108219	NM_004626	ENSG00000085741	WNT11	HWNT11	Wnt family member 11	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-3351	chr11	75916558	75923156	+	110.1	6598	Intergenic	CpG	-2283	NM_004626	7481	Hs.108219	NM_004626	ENSG00000085741	WNT11	HWNT11	Wnt family member 11	protein-coding	110.09	14.56	7.561126374	3.53E-45
chr11-3355	chr11	75981390	75983067	+	26.9	1677	Intergenic	Intergenic	-64654	NM_004626	7481	Hs.108219	NM_004626	ENSG00000085741	WNT11	HWNT11	Wnt family member 11	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr11-3357	chr11	78581264	78582556	+	17.3	1292	"intron (NM_001098816, intron 9 of 33)"	"intron (NM_001098816, intron 9 of 33)"	-296001	NM_024678	79731	Hs.503389	NM_024678	ENSG00000137513	NARS2	DFNB94|SLM5|asnRS	"asparaginyl-tRNA synthetase 2, mitochondrial (putative)"	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr11-3359	chr11	79346029	79347029	+	14.7	1000	Intergenic	Intergenic	-194834	NM_001098816	26011	Hs.213087	NM_001098816	ENSG00000149256	TENM4	Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4	teneurin transmembrane protein 4	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-336	chr11	43575800	43578460	+	37.1	2660	Intergenic	Intergenic	-4076	NR_031577	100313777		NR_031577	ENSG00000211568	MIR670	hsa-mir-670	microRNA 670	ncRNA	37.12	6.8	5.458823529	7.17E-13
chr11-3360	chr11	79605298	79606298	+	13.4	1000	Intergenic	Intergenic	-454103	NM_001098816	26011	Hs.213087	NM_001098816	ENSG00000149256	TENM4	Doc4|ETM5|ODZ4|TNM4|Ten-M4|ten-4	teneurin transmembrane protein 4	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr11-3361	chr11	81344051	81345051	+	15.4	1000	Intergenic	Intergenic	257327	NR_036186	100422823		NR_036186	ENSG00000264110	MIR4300	-	microRNA 4300	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr11-3362	chr11	85319297	85320297	+	15.4	1000	"intron (NM_001142699, intron 2 of 27)"	HERV9-int|LTR|ERV1	18517	NM_001142699	1740	Hs.367656	NM_001364	ENSG00000150672	DLG2	PPP1R58|PSD-93|PSD93|chapsyn-110	discs large MAGUK scaffold protein 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-3369	chr11	85841036	85842636	+	19.8	1600	Intergenic	MER58D|DNA|hAT-Charlie	-60913	NM_001206947	8301	Hs.163893	NM_007166	ENSG00000073921	PICALM	CALM|CLTH|LAP	phosphatidylinositol binding clathrin assembly protein	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr11-3371	chr11	85878369	85879369	+	14.7	1000	Intergenic	Intergenic	-76557	NM_001308007	8726	Hs.503510	NM_003797	ENSG00000074266	EED	HEED|WAIT1	embryonic ectoderm development	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr11-3375	chr11	86646261	86647261	+	14.1	1000	"non-coding (NR_120593, exon 3 of 3)"	"non-coding (NR_120593, exon 3 of 3)"	19679	NM_012193	8322	Hs.591968	NM_012193	ENSG00000174804	FZD4	CD344|EVR1|FEVR|FZD4S|Fz-4|Fz4|FzE4|GPCR|hFz4	frizzled class receptor 4	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr11-3381	chr11	94388312	94392794	+	59.5	4482	"intron (NR_135096, intron 4 of 6)"	MER51B|LTR|ERV1	82968	NR_135093	105369438	Hs.568921	NR_135093	ENSG00000255929	LOC105369438	-	uncharacterized LOC105369438	ncRNA	59.53	11.65	5.109871245	3.28E-18
chr11-3385	chr11	94490686	94491686	+	14.1	1000	Intergenic	AluSx|SINE|Alu	-10322	NM_001301007	154810	Hs.503594	NM_130847	ENSG00000166025	AMOTL1	JEAP	angiomotin like 1	protein-coding	14.08	0	14.5040551	3.99E-13
chr11-3386	chr11	94529535	94530535	+	13.4	1000	"intron (NM_130847, intron 2 of 12)"	(TA)n|Simple_repeat|Simple_repeat	28527	NM_130847	154810	Hs.503594	NM_130847	ENSG00000166025	AMOTL1	JEAP	angiomotin like 1	protein-coding	13.44	0.49	27.42857143	1.16E-11
chr11-3392	chr11	95065790	95066790	+	15.4	1000	Intergenic	Intergenic	-100585	NM_001271594	143686	Hs.120633	NM_144665	ENSG00000149212	SESN3	SEST3	sestrin 3	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr11-3393	chr11	95281196	95282602	+	23	1406	Intergenic	Intergenic	241055	NM_144664	143684	Hs.288304	NM_144664	ENSG00000077458	FAM76B	-	family with sequence similarity 76 member B	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr11-3397	chr11	95822602	95823602	+	14.1	1000	"intron (NM_032427, intron 2 of 4)"	"intron (NM_032427, intron 2 of 4)"	-165731	NM_016156	8898	Hs.181326	NM_016156	ENSG00000087053	MTMR2	CMT4B|CMT4B1	myotubularin related protein 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr11-3398	chr11	98891224	98892224	+	14.7	1000	promoter-TSS (NM_001243271)	promoter-TSS (NM_001243271)	18	NM_014361	53942	Hs.656783	NM_014361	ENSG00000149972	CNTN5	HNB-2s|NB-2	contactin 5	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr11-3400	chr11	102002086	102003654	+	18.6	1568	"intron (NM_001282100, intron 2 of 7)"	"intron (NM_001282100, intron 2 of 7)"	19699	NM_001195045	10413	Hs.503692	NM_006106	ENSG00000137693	YAP1	COB1|YAP|YAP2|YAP65|YKI	Yes associated protein 1	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr11-3402	chr11	102423136	102424695	+	23	1559	Intergenic	Intergenic	-22431	NM_002423	4316	Hs.2256	NM_002423	ENSG00000137673	MMP7	MMP-7|MPSL1|PUMP-1	matrix metallopeptidase 7	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr11-3408	chr11	111332909	111333909	+	14.7	1000	Intergenic	Intergenic	-44498	NR_046085	100132078	Hs.672662	NR_046085	ENSG00000255428	LOC100132078	-	uncharacterized LOC100132078	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr11-3409	chr11	111403105	111404105	+	14.7	1000	"intron (NM_207430, intron 4 of 6)"	"intron (NM_207430, intron 4 of 6)"	-7400	NM_001318799	143903	Hs.503831	NM_178834	ENSG00000204381	LAYN	-	layilin	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr11-3412	chr11	112659645	112660645	+	14.1	1000	Intergenic	Tigger3b|DNA|TcMar-Tigger	-171824	NM_181351	4684	Hs.503878	NM_000615	ENSG00000149294	NCAM1	CD56|MSK39|NCAM	neural cell adhesion molecule 1	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr11-3414	chr11	113050800	113052171	+	21.1	1371	"intron (NM_001076682, intron 2 of 19)"	MIRb|SINE|MIR	93138	NR_034101	100288346	Hs.661826	NR_034101	ENSG00000227487	NCAM1-AS1	-	NCAM1 antisense RNA1	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr11-3415	chr11	113264597	113265597	+	12.8	1000	"intron (NM_178510, intron 2 of 7)"	L2c|LINE|L2	6584	NM_178510	255239	Hs.448473	NM_178510	ENSG00000170209	ANKK1	PKK2	ankyrin repeat and kinase domain containing 1	protein-coding	12.8	1.94	6.597938144	4.51E-06
chr11-3416	chr11	113810048	113811048	+	14.7	1000	"intron (NM_006028, intron 6 of 8)"	"intron (NM_006028, intron 6 of 8)"	35030	NM_006028	9177	Hs.241377	NM_006028	ENSG00000149305	HTR3B	5-HT3B	5-hydroxytryptamine receptor 3B	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-3418	chr11	113927682	113928682	+	15.4	1000	Intergenic	Intergenic	-2249	NM_006006	7704	Hs.591945	NM_006006	ENSG00000109906	ZBTB16	PLZF|ZNF145	zinc finger and BTB domain containing 16	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-3422	chr11	114141474	114144897	+	39.7	3423	Intergenic	Intergenic	-23350	NM_006169	4837	Hs.503911	NM_006169	ENSG00000166741	NNMT	-	nicotinamide N-methyltransferase	protein-coding	39.69	9.71	4.08753862	1.52E-10
chr11-3424	chr11	114911964	114912964	+	14.1	1000	Intergenic	Intergenic	-291832	NR_135108	105369509	Hs.736064	NR_135108		LOC105369509	-	uncharacterized LOC105369509	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr11-3427	chr11	115292385	115293385	+	15.4	1000	"intron (NM_001098517, intron 1 of 8)"	"intron (NM_001098517, intron 1 of 8)"	25411	NR_135102	105369507	Hs.664155	NR_135102	ENSG00000256315	LOC105369507	-	uncharacterized LOC105369507	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr11-3429	chr11	115559599	115560599	+	14.7	1000	Intergenic	Intergenic	45381	NR_135066	101928985	Hs.398155	NR_135066		LOC101928985	-	uncharacterized LOC101928985	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr11-3430	chr11	115599290	115600290	+	15.4	1000	Intergenic	Intergenic	5690	NR_135066	101928985	Hs.398155	NR_135066		LOC101928985	-	uncharacterized LOC101928985	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr11-3435	chr11	116254792	116255792	+	15.4	1000	Intergenic	Intergenic	-254847	NR_135069	101929011	Hs.733911	NR_135069	ENSG00000237937	LOC101929011	-	uncharacterized LOC101929011	ncRNA	15.36	0	15.82260557	1.26E-14
chr11-3437	chr11	116355237	116356237	+	14.7	1000	Intergenic	Intergenic	-154402	NR_135069	101929011	Hs.733911	NR_135069	ENSG00000237937	LOC101929011	-	uncharacterized LOC101929011	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr11-3439	chr11	116389990	116392387	+	32	2397	Intergenic	L1M7|LINE|L1	-118951	NR_135069	101929011	Hs.733911	NR_135069	ENSG00000237937	LOC101929011	-	uncharacterized LOC101929011	ncRNA	32	5.82	5.498281787	2.32E-11
chr11-3441	chr11	116400477	116407550	+	108.8	7073	Intergenic	Intergenic	-106126	NR_135069	101929011	Hs.733911	NR_135069	ENSG00000237937	LOC101929011	-	uncharacterized LOC101929011	ncRNA	108.81	9.71	11.20597322	1.21E-57
chr11-3454	chr11	117417708	117418708	+	14.7	1000	"intron (NM_020693, intron 3 of 32)"	"intron (NM_020693, intron 3 of 32)"	219637	NM_014956	22897	Hs.504009	NM_014956	ENSG00000110274	CEP164	NPHP15	centrosomal protein 164	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-3459	chr11	117505271	117508226	+	35.2	2955	"intron (NM_020693, intron 3 of 32)"	"intron (NM_020693, intron 3 of 32)"	161228	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	35.2	8.74	4.027459954	4.36E-09
chr11-3460	chr11	117531578	117533972	+	34.6	2394	"intron (NM_020693, intron 3 of 32)"	"intron (NM_020693, intron 3 of 32)"	135201	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	34.56	4.37	7.908466819	8.51E-16
chr11-347	chr11	64057807	64061479	+	76.8	3672	"intron (NM_001317090, intron 1 of 6)"	CpG	161	NM_001317090	50801	Hs.647233	NM_016611	ENSG00000182450	KCNK4	K2p4.1|TRAAK|TRAAK1	potassium two pore domain channel subfamily K member 4	protein-coding	76.81	9.71	7.910401648	4.31E-33
chr11-3470	chr11	117590320	117591320	+	14.7	1000	"intron (NM_020693, intron 3 of 32)"	"intron (NM_020693, intron 3 of 32)"	77156	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-3471	chr11	117616284	117618348	+	31.4	2064	"intron (NM_020693, intron 3 of 32)"	"intron (NM_020693, intron 3 of 32)"	50660	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	31.36	5.34	5.872659176	2.29E-11
chr11-3474	chr11	117652363	117653363	+	15.4	1000	"intron (NM_020693, intron 1 of 32)"	"intron (NM_020693, intron 1 of 32)"	15113	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr11-3475	chr11	117664891	117665891	+	15.4	1000	"intron (NM_020693, intron 1 of 32)"	"intron (NM_020693, intron 1 of 32)"	2585	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-3476	chr11	117686319	117687319	+	15.4	1000	Intergenic	Intergenic	8640	NM_001680	486	Hs.731865	NM_001680	ENSG00000137731	FXYD2	ATP1G1|HOMG2	FXYD domain containing ion transport regulator 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-3478	chr11	117729263	117730263	+	14.7	1000	"intron (NM_001164837, intron 1 of 8)"	AluSx|SINE|Alu	17983	NM_001204268	100533181	Hs.744850	NM_001204268	ENSG00000255245	FXYD6-FXYD2	-	FXYD6-FXYD2 readthrough	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr11-3480	chr11	117737117	117738117	+	15.4	1000	"intron (NM_001164837, intron 1 of 8)"	"intron (NM_001164837, intron 1 of 8)"	10129	NM_001204268	100533181	Hs.744850	NM_001204268	ENSG00000255245	FXYD6-FXYD2	-	FXYD6-FXYD2 readthrough	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr11-3488	chr11	117936642	117937642	+	14.7	1000	"intron (NR_038318, intron 1 of 3)"	L2c|LINE|L2	-10585	NM_019894	56649	Hs.161985	NM_019894	ENSG00000137648	TMPRSS4	CAPH2|MT-SP2|TMPRSS3	"transmembrane protease, serine 4"	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr11-349	chr11	64063765	64068389	+	76.2	4624	"intron (NR_133661, intron 6 of 6)"	AluJb|SINE|Alu	-1786	NM_001039496	25858	Hs.97174	NM_001039496		TEX40	C11orf20	testis expressed 40	protein-coding	76.17	12.62	6.035657686	1.94E-26
chr11-3494	chr11	118056184	118057184	+	15.4	1000	Intergenic	Intergenic	-9347	NM_004588	6327	Hs.129783	NM_004588	ENSG00000149575	SCN2B	ATFB14	sodium voltage-gated channel beta subunit 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr11-3495	chr11	118478490	118481190	+	39	2700	"intron (NM_001144758, intron 1 of 22)"	CpG	1534	NM_001144758	23187	Hs.504062	NM_015157	ENSG00000019144	PHLDB1	LL5A	pleckstrin homology like domain family B member 1	protein-coding	39.04	8.25	4.732121212	1.43E-11
chr11-3497	chr11	119222842	119223842	+	12.8	1000	Intergenic	AluSx|SINE|Alu	-5959	NM_031433	83552	Hs.632102	NM_031433	ENSG00000235718	MFRP	MCOP5|NNO2|RD6	membrane frizzled-related protein	protein-coding	12.8	1.94	6.597938144	4.51E-06
chr11-3499	chr11	119301635	119302635	+	15.4	1000	"intron (NR_034160, intron 2 of 3)"	L2c|LINE|L2	-6440	NM_001311162	7070	Hs.644697	NM_006288	ENSG00000154096	THY1	CD90|CDw90	Thy-1 cell surface antigen	protein-coding	15.36	0	15.82260557	1.26E-14
chr11-350	chr11	64712213	64713496	+	24.3	1283	"intron (NM_001037225, intron 8 of 10)"	AluY|SINE|Alu	-9494	NM_130769	170589	Hs.436119	NM_130769	ENSG00000149735	GPHA2	A2|GPA2|ZSIG51	glycoprotein hormone alpha 2	protein-coding	24.32	2.43	10.00823045	2.59E-13
chr11-3500	chr11	119343822	119344822	+	14.7	1000	"intron (NR_034160, intron 3 of 3)"	"intron (NR_034160, intron 3 of 3)"	-48627	NM_001311162	7070	Hs.644697	NM_006288	ENSG00000154096	THY1	CD90|CDw90	Thy-1 cell surface antigen	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr11-3502	chr11	119396180	119397180	+	14.7	1000	Intergenic	L2a|LINE|L2	-100985	NM_001311162	7070	Hs.644697	NM_006288	ENSG00000154096	THY1	CD90|CDw90	Thy-1 cell surface antigen	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-3503	chr11	119418022	119419022	+	15.4	1000	Intergenic	MER52D|LTR|ERV1	-122827	NM_001311162	7070	Hs.644697	NM_006288	ENSG00000154096	THY1	CD90|CDw90	Thy-1 cell surface antigen	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-3504	chr11	119449010	119450982	+	29.4	1972	Intergenic	LTR26E|LTR|ERV1	149439	NM_203286	5818	Hs.334846	NM_002855	ENSG00000110400	NECTIN1	CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1	nectin cell adhesion molecule 1	protein-coding	29.44	3.4	8.658823529	1.72E-14
chr11-3507	chr11	119503165	119504822	+	25.6	1657	Intergenic	MLT1A0|LTR|ERVL-MaLR	95442	NM_203286	5818	Hs.334846	NM_002855	ENSG00000110400	NECTIN1	CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1	nectin cell adhesion molecule 1	protein-coding	25.6	6.31	4.057052298	2.77E-07
chr11-3509	chr11	119514151	119515151	+	14.1	1000	"intron (NM_203285, intron 5 of 7)"	"intron (NM_203285, intron 5 of 7)"	84784	NM_203286	5818	Hs.334846	NM_002855	ENSG00000110400	NECTIN1	CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1	nectin cell adhesion molecule 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr11-351	chr11	65778878	65779878	+	20.5	1000	promoter-TSS (NM_001323)	promoter-TSS (NM_001323)	-84	NM_001323	1474	Hs.139389	NM_001323	ENSG00000175315	CST6	-	cystatin E/M	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr11-3510	chr11	119519767	119520767	+	15.4	1000	"intron (NM_203285, intron 5 of 7)"	AluSx3|SINE|Alu	79168	NM_203286	5818	Hs.334846	NM_002855	ENSG00000110400	NECTIN1	CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1	nectin cell adhesion molecule 1	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr11-3511	chr11	119597599	119599243	+	30.7	1644	"intron (NM_203286, intron 1 of 5)"	CpG	1014	NM_203286	5818	Hs.334846	NM_002855	ENSG00000110400	NECTIN1	CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1	nectin cell adhesion molecule 1	protein-coding	30.72	1.46	21.04109589	1.19E-23
chr11-3512	chr11	119646100	119651130	+	65.3	5030	Intergenic	Intergenic	48322	NR_120587	102724301	Hs.637640	NR_120587	ENSG00000254854	LOC102724301	-	uncharacterized LOC102724301	ncRNA	65.29	13.11	4.980167811	9.49E-20
chr11-3514	chr11	119667387	119668387	+	14.7	1000	Intergenic	Intergenic	67594	NR_120587	102724301	Hs.637640	NR_120587	ENSG00000254854	LOC102724301	-	uncharacterized LOC102724301	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr11-3515	chr11	119690521	119691521	+	14.7	1000	Intergenic	Intergenic	90728	NR_120587	102724301	Hs.637640	NR_120587	ENSG00000254854	LOC102724301	-	uncharacterized LOC102724301	ncRNA	14.72	0	15.16333034	3.99E-13
chr11-3516	chr11	119777009	119779545	+	30.1	2536	Intergenic	Intergenic	177984	NR_120587	102724301	Hs.637640	NR_120587	ENSG00000254854	LOC102724301	-	uncharacterized LOC102724301	ncRNA	30.08	6.8	4.423529412	1.16E-08
chr11-3518	chr11	119793661	119796571	+	41.6	2910	Intergenic	Intergenic	194823	NR_120587	102724301	Hs.637640	NR_120587	ENSG00000254854	LOC102724301	-	uncharacterized LOC102724301	ncRNA	41.61	8.74	4.760869565	2.55E-12
chr11-3528	chr11	120117213	120118213	+	15.4	1000	"intron (NM_014352, intron 2 of 12)"	"intron (NM_014352, intron 2 of 12)"	6810	NM_014352	25833	Hs.227115	NM_014352	ENSG00000137709	POU2F3	Epoc-1|OCT-11|OCT11|OTF-11|PLA-1|PLA1|Skn-1a	POU class 2 homeobox 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-3530	chr11	120189223	120190223	+	14.7	1000	"3' UTR (NM_001244682, exon 13 of 13)"	"3' UTR (NM_001244682, exon 13 of 13)"	-6115	NM_174926	219902	Hs.643516	NM_174926	ENSG00000181264	TMEM136	-	transmembrane protein 136	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr11-3532	chr11	120376644	120377644	+	15.4	1000	Intergenic	Intergenic	-5311	NM_014619	2900	Hs.538738	NM_014619	ENSG00000149403	GRIK4	EAA1|GRIK|GluK4|KA1	glutamate ionotropic receptor kainate type subunit 4	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr11-3533	chr11	120395091	120398417	+	44.8	3326	"intron (NM_014619, intron 1 of 20)"	L1ME3A|LINE|L1	14299	NM_014619	2900	Hs.538738	NM_014619	ENSG00000149403	GRIK4	EAA1|GRIK|GluK4|KA1	glutamate ionotropic receptor kainate type subunit 4	protein-coding	44.81	6.8	6.589705882	1.33E-17
chr11-3536	chr11	120515049	120518407	+	42.9	3358	"intron (NM_001282470, intron 1 of 19)"	"intron (NM_001282470, intron 1 of 19)"	81583	NM_001282473	2900	Hs.538738	NM_014619	ENSG00000149403	GRIK4	EAA1|GRIK|GluK4|KA1	glutamate ionotropic receptor kainate type subunit 4	protein-coding	42.89	5.82	7.369415808	7.27E-18
chr11-3538	chr11	120748219	120749219	+	15.4	1000	"intron (NM_001282470, intron 10 of 19)"	"intron (NM_001282470, intron 10 of 19)"	16787	NR_132790	101929227	Hs.627156	NR_132790	ENSG00000250493	LOC101929227	-	uncharacterized LOC101929227	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr11-3539	chr11	120761382	120762382	+	15.4	1000	"intron (NM_001282470, intron 10 of 19)"	"intron (NM_001282470, intron 10 of 19)"	3624	NR_132790	101929227	Hs.627156	NR_132790	ENSG00000250493	LOC101929227	-	uncharacterized LOC101929227	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr11-3540	chr11	120769164	120770164	+	15.4	1000	"intron (NM_001282470, intron 11 of 19)"	"intron (NM_001282470, intron 11 of 19)"	-4158	NR_132790	101929227	Hs.627156	NR_132790	ENSG00000250493	LOC101929227	-	uncharacterized LOC101929227	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr11-3542	chr11	121035192	121037829	+	38.4	2637	"intron (NM_005422, intron 16 of 22)"	"intron (NM_005422, intron 16 of 22)"	63135	NM_005422	7007	Hs.248162	NM_005422	ENSG00000109927	TECTA	DFNA12|DFNA8|DFNB21	tectorin alpha	protein-coding	38.4	2.91	13.19587629	2.14E-23
chr11-3543	chr11	121134720	121135720	+	14.7	1000	Intergenic	L1MB7|LINE|L1	-28168	NM_006918	6309	Hs.287749	NM_006918	ENSG00000109929	SC5D	ERG3|S5DES|SC5DL	sterol-C5-desaturase	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-3547	chr11	121571956	121572956	+	14.7	1000	Intergenic	L2|LINE|L2	249544	NM_003105	6653	Hs.368592	NM_003105	ENSG00000137642	SORL1	C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250	sortilin related receptor 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-3549	chr11	121808546	121809836	+	19.8	1290	Intergenic	Intergenic	161361	NR_029671	406911		NR_029671	ENSG00000207971	MIR125B1	MIRN125B1|mir-125b-1	microRNA 125b-1	ncRNA	19.84	1.94	10.22680412	9.57E-11
chr11-3551	chr11	122025702	122026702	+	14.1	1000	"intron (NR_137184, intron 1 of 1)"	"intron (NR_137184, intron 1 of 1)"	877	NR_137188	399959	Hs.44098	NR_024430		MIR100HG	AGD1|linc-NeD125|lncRNA-N2	mir-100-let-7a-2 cluster host gene	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr11-3553	chr11	122228426	122229426	+	15.4	1000	"intron (NR_137179, intron 1 of 4)"	"intron (NR_137179, intron 1 of 4)"	9770	NR_137192	399959	Hs.44098	NR_024430		MIR100HG	AGD1|linc-NeD125|lncRNA-N2	mir-100-let-7a-2 cluster host gene	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr11-3554	chr11	122383069	122384069	+	14.1	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	-89990	NR_137179	399959	Hs.44098	NR_024430		MIR100HG	AGD1|linc-NeD125|lncRNA-N2	mir-100-let-7a-2 cluster host gene	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr11-3556	chr11	122751660	122752660	+	14.1	1000	Intergenic	AluJb|SINE|Alu	-1076	NM_024806	79864	Hs.164705	NM_024806	ENSG00000109944	C11orf63	-	chromosome 11 open reading frame 63	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr11-3557	chr11	122770831	122771831	+	16.6	1000	"intron (NM_024806, intron 2 of 8)"	"intron (NM_024806, intron 2 of 8)"	18095	NM_199124	79864	Hs.164705	NM_024806	ENSG00000109944	C11orf63	-	chromosome 11 open reading frame 63	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr11-3558	chr11	122826964	122827964	+	15.4	1000	"intron (NM_024806, intron 7 of 8)"	"intron (NM_024806, intron 7 of 8)"	24915	NM_001098169	390259	Hs.449687	NM_001098169	ENSG00000188909	BSX	BSX1	brain specific homeobox	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-3561	chr11	122897064	122899391	+	33.9	2327	Intergenic	Intergenic	9953	NR_027288	341056	Hs.620309	NR_027288		LOC341056	-	SUMO1 activating enzyme subunit 1 pseudogene	pseudo	33.92	5.82	5.828178694	4.04E-12
chr11-3569	chr11	123077263	123078263	+	15.4	1000	Intergenic	Intergenic	-11750	NM_024769	79827	Hs.591949	NM_024769	ENSG00000166250	CLMP	ACAM|ASAM|CSBM|CSBS	CXADR like membrane protein	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr11-357	chr11	75060696	75063450	+	48	2754	"intron (NM_020251, intron 1 of 14)"	"intron (NM_020251, intron 1 of 14)"	802	NM_020251	408	Hs.503284	NM_004041	ENSG00000137486	ARRB1	ARB1|ARR1	arrestin beta 1	protein-coding	48.01	3.88	12.37371134	2.57E-27
chr11-3571	chr11	123224024	123225024	+	14.1	1000	Intergenic	Intergenic	27696	NR_039714	100616319		NR_039714	ENSG00000265357	MIR4493	-	microRNA 4493	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr11-3572	chr11	123232265	123233265	+	15.4	1000	Intergenic	Intergenic	19455	NR_039714	100616319		NR_039714	ENSG00000265357	MIR4493	-	microRNA 4493	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr11-3577	chr11	123572539	123574646	+	30.7	2107	Intergenic	L2a|LINE|L2	28101	NM_001301819	7753	Hs.112556	NM_003455	ENSG00000166261	ZNF202	ZKSCAN10|ZSCAN42	zinc finger protein 202	protein-coding	30.72	3.88	7.917525773	3.25E-14
chr11-3597	chr11	125053940	125054940	+	15.4	1000	"intron (NM_022062, intron 1 of 12)"	"intron (NM_022062, intron 1 of 12)"	19881	NM_022062	63876	Hs.278564	NM_022062	ENSG00000165495	PKNOX2	PREP2	PBX/knotted 1 homeobox 2	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr11-3598	chr11	125070789	125071789	+	14.1	1000	"intron (NM_022062, intron 1 of 12)"	"intron (NM_022062, intron 1 of 12)"	36730	NM_022062	63876	Hs.278564	NM_022062	ENSG00000165495	PKNOX2	PREP2	PBX/knotted 1 homeobox 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr11-3599	chr11	125081910	125083274	+	19.8	1364	"intron (NM_022062, intron 1 of 12)"	"intron (NM_022062, intron 1 of 12)"	48033	NM_022062	63876	Hs.278564	NM_022062	ENSG00000165495	PKNOX2	PREP2	PBX/knotted 1 homeobox 2	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr11-36	chr11	2736848	2738106	+	29.4	1258	"intron (NM_000218, intron 11 of 15)"	"intron (NM_000218, intron 11 of 15)"	-16249	NR_002728	10984	Hs.604823	NR_002728	ENSG00000269821	KCNQ1OT1	KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012	KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)	ncRNA	29.44	4.37	6.736842105	2.70E-12
chr11-360	chr11	75306072	75307072	+	19.8	1000	"intron (NM_033063, intron 3 of 3)"	L3|LINE|CR1	33471	NM_001235	871	Hs.596449	NM_001235	ENSG00000149257	SERPINH1	AsTP3|CBP1|CBP2|HSP47|OI10|PIG14|PPROM|RA-A47|SERPINH2|gp46	serpin family H member 1	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr11-3600	chr11	125115633	125116633	+	14.1	1000	"intron (NM_022062, intron 2 of 12)"	MSTD|LTR|ERVL-MaLR	81574	NM_022062	63876	Hs.278564	NM_022062	ENSG00000165495	PKNOX2	PREP2	PBX/knotted 1 homeobox 2	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr11-3604	chr11	125196427	125198698	+	35.2	2271	"intron (NM_022062, intron 2 of 12)"	"intron (NM_022062, intron 2 of 12)"	163003	NM_022062	63876	Hs.278564	NM_022062	ENSG00000165495	PKNOX2	PREP2	PBX/knotted 1 homeobox 2	protein-coding	35.2	5.34	6.5917603	9.27E-14
chr11-3606	chr11	125267453	125268453	+	16	1000	"exon (NM_022062, exon 7 of 13)"	"exon (NM_022062, exon 7 of 13)"	-97157	NM_001301851	403312	Hs.450611	NM_203452		LOC403312	-	putative uncharacterized protein MGC39545	protein-coding	16	2.91	5.498281787	4.98E-06
chr11-3607	chr11	125288525	125289525	+	14.7	1000	"intron (NM_022062, intron 10 of 12)"	MIRc|SINE|MIR	-76085	NM_001301851	403312	Hs.450611	NM_203452		LOC403312	-	putative uncharacterized protein MGC39545	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr11-3608	chr11	125295969	125297511	+	23.7	1542	"intron (NM_022062, intron 10 of 12)"	L2c|LINE|L2	-68370	NM_001301851	403312	Hs.450611	NM_203452		LOC403312	-	putative uncharacterized protein MGC39545	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr11-3609	chr11	125326160	125327160	+	15.4	1000	"intron (NM_005103, intron 5 of 9)"	"intron (NM_005103, intron 5 of 9)"	-38450	NM_001301851	403312	Hs.450611	NM_203452		LOC403312	-	putative uncharacterized protein MGC39545	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-3610	chr11	125348762	125349762	+	15.4	1000	"intron (NM_005103, intron 3 of 9)"	"intron (NM_005103, intron 3 of 9)"	-15848	NM_001301851	403312	Hs.450611	NM_203452		LOC403312	-	putative uncharacterized protein MGC39545	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-3611	chr11	125352926	125353926	+	14.7	1000	"intron (NM_005103, intron 2 of 9)"	"intron (NM_005103, intron 2 of 9)"	-11684	NM_001301851	403312	Hs.450611	NM_203452		LOC403312	-	putative uncharacterized protein MGC39545	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr11-3621	chr11	126607675	126608675	+	14.7	1000	"intron (NM_032531, intron 1 of 16)"	"intron (NM_032531, intron 1 of 16)"	82194	NR_120533	101929427	Hs.600341	NR_120532	ENSG00000254607	LOC101929427	-	uncharacterized LOC101929427	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr11-3622	chr11	126670714	126673924	+	44.8	3210	"intron (NM_032531, intron 1 of 16)"	MER6A|DNA|TcMar-Tigger	-138323	NR_046986	100874251	Hs.319053	NR_046986	ENSG00000254960	KIRREL3-AS2	-	KIRREL3 antisense RNA 2	ncRNA	44.81	8.74	5.127002288	2.02E-14
chr11-3624	chr11	126692807	126694409	+	25.6	1602	"intron (NM_032531, intron 1 of 16)"	LFSINE_Vert|SINE|SINE	-117034	NR_046986	100874251	Hs.319053	NR_046986	ENSG00000254960	KIRREL3-AS2	-	KIRREL3 antisense RNA 2	ncRNA	25.6	2.91	8.797250859	6.53E-13
chr11-3631	chr11	126910505	126911505	+	16.6	1000	Intergenic	AluSq|SINE|Alu	-25892	NR_120578	101929473	Hs.737523	NR_120578	ENSG00000255087	LOC101929473	-	uncharacterized LOC101929473	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr11-3632	chr11	126974533	126975533	+	14.7	1000	Intergenic	Intergenic	38136	NR_120578	101929473	Hs.737523	NR_120578	ENSG00000255087	LOC101929473	-	uncharacterized LOC101929473	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr11-3634	chr11	127118455	127119455	+	15.4	1000	Intergenic	Intergenic	-22010	NR_120580	101929497	Hs.737442	NR_120580	ENSG00000273409	LOC101929497	-	uncharacterized LOC101929497	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr11-3636	chr11	127338233	127339525	+	18.6	1292	Intergenic	Charlie1a|DNA|hAT-Charlie	197914	NR_120580	101929497	Hs.737442	NR_120580	ENSG00000273409	LOC101929497	-	uncharacterized LOC101929497	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr11-3641	chr11	127999031	128000031	+	14.7	1000	Intergenic	L2|LINE|L2	392674	NM_005238	2113	Hs.369438	NM_005238	ENSG00000134954	ETS1	ETS-1|EWSR2|c-ets-1|p54	"ETS proto-oncogene 1, transcription factor"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-3642	chr11	128023942	128024942	+	14.7	1000	Intergenic	Intergenic	367763	NM_005238	2113	Hs.369438	NM_005238	ENSG00000134954	ETS1	ETS-1|EWSR2|c-ets-1|p54	"ETS proto-oncogene 1, transcription factor"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr11-3645	chr11	128797160	128798160	+	15.4	1000	Intergenic	Intergenic	10069	NM_001195194	63970	Hs.160953	NM_022112	ENSG00000120471	TP53AIP1	P53AIP1	tumor protein p53 regulated apoptosis inducing protein 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr11-3646	chr11	128805238	128806238	+	15.4	1000	"3' UTR (NM_001251964, exon 2 of 2)"	"3' UTR (NM_001251964, exon 2 of 2)"	1991	NM_001195194	63970	Hs.160953	NM_022112	ENSG00000120471	TP53AIP1	P53AIP1	tumor protein p53 regulated apoptosis inducing protein 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-3651	chr11	129220964	129221964	+	14.1	1000	Intergenic	L1MC4|LINE|L1	-24417	NM_003658	8538	Hs.591944	NM_003658	ENSG00000043039	BARX2	-	BARX homeobox 2	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr11-3653	chr11	129272535	129273535	+	14.1	1000	"intron (NM_003658, intron 1 of 3)"	"intron (NM_003658, intron 1 of 3)"	27154	NM_003658	8538	Hs.591944	NM_003658	ENSG00000043039	BARX2	-	BARX homeobox 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr11-3658	chr11	129672166	129673166	+	14.7	1000	Intergenic	L1PBa|LINE|L1	-13010	NM_138788	120224	Hs.504301	NM_138788	ENSG00000151715	TMEM45B	-	transmembrane protein 45B	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr11-3660	chr11	129697541	129698953	+	18.6	1412	"intron (NM_001331212, intron 2 of 6)"	"intron (NM_001331212, intron 2 of 6)"	12571	NM_001331211	120224	Hs.504301	NM_138788	ENSG00000151715	TMEM45B	-	transmembrane protein 45B	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr11-3662	chr11	129922175	129923175	+	14.7	1000	Intergenic	Intergenic	-17041	NM_001642	334	Hs.370247	NM_001642	ENSG00000084234	APLP2	APLP-2|APPH|APPL2|CDEBP	amyloid beta precursor like protein 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr11-3664	chr11	130278143	130281610	+	49.9	3467	"intron (NM_007037, intron 6 of 8)"	"intron (NM_007037, intron 6 of 8)"	19012	NM_007037	11095	Hs.271605	NM_007037	ENSG00000134917	ADAMTS8	ADAM-TS8|METH2	ADAM metallopeptidase with thrombospondin type 1 motif 8	protein-coding	49.93	8.74	5.712814645	2.17E-17
chr11-3665	chr11	130288321	130291486	+	45.4	3165	"intron (NM_007037, intron 1 of 8)"	MIRb|SINE|MIR	8985	NM_007037	11095	Hs.271605	NM_007037	ENSG00000134917	ADAMTS8	ADAM-TS8|METH2	ADAM metallopeptidase with thrombospondin type 1 motif 8	protein-coding	45.45	9.71	4.680741504	3.88E-13
chr11-367	chr11	113104386	113105961	+	25.6	1575	"intron (NM_001076682, intron 13 of 19)"	L1MB3|LINE|L1	39450	NR_034101	100288346	Hs.661826	NR_034101	ENSG00000227487	NCAM1-AS1	-	NCAM1 antisense RNA1	ncRNA	25.6	3.88	6.597938144	1.00E-10
chr11-3670	chr11	130562590	130563590	+	14.1	1000	"intron (NM_001271983, intron 1 of 2)"	"intron (NM_001271983, intron 1 of 2)"	20239	NM_001271983	283171	Hs.376151	NM_001271983		C11orf44	-	chromosome 11 open reading frame 44	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr11-3671	chr11	130713515	130716864	+	44.8	3349	"intron (NR_125383, intron 5 of 5)"	L1MC4a|LINE|L1	16816	NR_125383	100507431	Hs.375101	NR_125383		LOC100507431	-	uncharacterized LOC100507431	ncRNA	44.81	7.77	5.767052767	6.82E-16
chr11-3674	chr11	131464896	131465896	+	14.7	1000	"intron (NM_001048209, intron 1 of 7)"	"intron (NM_001048209, intron 1 of 7)"	-54635	NR_110140	101929653	Hs.559159	NR_110140	ENSG00000237654	LOC101929653	-	uncharacterized LOC101929653	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr11-3675	chr11	131600418	131601418	+	14.1	1000	"intron (NM_001048209, intron 1 of 7)"	"intron (NM_001048209, intron 1 of 7)"	-67468	NR_126159	101929637	Hs.730330	NM_207432	ENSG00000224795	NTM-AS1	C11orf39	NTM antisense RNA 1	ncRNA	14.08	0	14.5040551	3.99E-13
chr11-3677	chr11	132217901	132219347	+	21.8	1446	Intergenic	AluJo|SINE|Alu	64428	NR_046820	100874281		NR_046820		NTM-IT	NTM-IT3	NTM intronic transcript	ncRNA	21.76	3.88	5.608247423	2.53E-08
chr11-3678	chr11	132816238	132817238	+	15.4	1000	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	-3075	NM_001319105	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-3680	chr11	132914034	132915992	+	29.4	1958	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	-101350	NM_001319105	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	29.44	2.91	10.11683849	7.13E-16
chr11-3682	chr11	132957841	132958841	+	14.1	1000	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	-144678	NM_001319105	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr11-3689	chr11	133324867	133325867	+	15.4	1000	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	77140	NM_001012393	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr11-3690	chr11	133362093	133363093	+	15.4	1000	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	39914	NM_001012393	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-3691	chr11	133375597	133376597	+	15.4	1000	"intron (NM_001012393, intron 1 of 7)"	MIRb|SINE|MIR	26410	NM_001012393	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr11-3694	chr11	133589016	133590016	+	13.4	1000	Intergenic	MIRc|SINE|MIR	90755	NR_120444	646522	Hs.560000	NR_120444	ENSG00000255258	LOC646522	-	uncharacterized LOC646522	ncRNA	13.44	0	13.84477987	1.16E-11
chr11-3699	chr11	133827806	133829084	+	19.8	1278	Intergenic	Intergenic	-1796	NM_001277285	22997	Hs.204121	NM_014987	ENSG00000080854	IGSF9B	-	immunoglobulin superfamily member 9B	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr11-3701	chr11	133914457	133915457	+	15.4	1000	Intergenic	Intergenic	12790	NR_027276	100128239	Hs.423734	NR_027276	ENSG00000204241	LOC100128239	-	uncharacterized LOC100128239	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr11-3707	chr11	134384124	134385124	+	15.4	1000	Intergenic	Intergenic	78248	NR_033852	283177	Hs.504390	NR_033852		LOC283177	-	uncharacterized LOC283177	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr11-3713	chr11	134663736	134664736	+	15.4	1000	Intergenic	Intergenic	-191010	NR_135050	100507548	Hs.639995	NR_135050		LOC100507548	-	uncharacterized LOC100507548	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr11-377	chr11	118520085	118521819	+	28.8	1734	"intron (NM_001144758, intron 19 of 22)"	"intron (NM_001144758, intron 19 of 22)"	6234	NR_106773	102466719		NR_106773	ENSG00000019144	MIR6716	hsa-mir-6716	microRNA 6716	ncRNA	28.8	0.97	29.69072165	9.47E-25
chr11-379	chr11	119744903	119746274	+	25.6	1371	Intergenic	Intergenic	145295	NR_120587	102724301	Hs.637640	NR_120587	ENSG00000254854	LOC102724301	-	uncharacterized LOC102724301	ncRNA	25.6	2.43	10.53497942	2.44E-14
chr11-381	chr11	121321025	121323381	+	43.5	2356	promoter-TSS (NM_003105)	promoter-TSS (NM_003105)	-709	NM_003105	6653	Hs.368592	NM_003105	ENSG00000137642	SORL1	C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250	sortilin related receptor 1	protein-coding	43.53	7.28	5.979395604	6.36E-16
chr11-384	chr11	122853444	122857374	+	67.2	3930	Intergenic	CpG	-3030	NM_001098169	390259	Hs.449687	NM_001098169	ENSG00000188909	BSX	BSX1	brain specific homeobox	protein-coding	67.21	13.59	4.945548197	8.51E-20
chr11-386	chr11	124614900	124616164	+	22.4	1264	"exon (NM_006176, exon 2 of 4)"	"exon (NM_006176, exon 2 of 4)"	5703	NM_006176	4900	Hs.524116	NM_006176	ENSG00000154146	NRGN	RC3|hng	neurogranin	protein-coding	22.4	0.97	23.09278351	1.19E-17
chr11-389	chr11	124732651	124733916	+	19.8	1265	Intergenic	Intergenic	-2022	NM_022370	64221	Hs.435621	NM_022370	ENSG00000154134	ROBO3	HGPPS|HGPS|RBIG1|RIG1	roundabout guidance receptor 3	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr11-394	chr11	133104029	133105280	+	21.1	1251	"intron (NM_001012393, intron 1 of 7)"	Plat_L3|LINE|CR1	-290991	NM_001319105	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr11-398	chr11	134333849	134338959	+	79.4	5110	"non-coding (NR_033852, exon 2 of 6)"	"non-coding (NR_033852, exon 2 of 6)"	30028	NR_033852	283177	Hs.504390	NR_033852		LOC283177	-	uncharacterized LOC283177	ncRNA	79.37	11.16	7.112007168	1.24E-31
chr11-421	chr11	11413313	11414582	+	19.8	1269	"intron (NM_198516, intron 3 of 10)"	AluSp|SINE|Alu	-39043	NM_001256686	283106	Hs.654675	NM_001256686	ENSG00000254598	CSNK2A3	CSNK2A1P	casein kinase 2 alpha 3	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr11-422	chr11	11427449	11432299	+	73	4850	"intron (NM_198516, intron 3 of 10)"	AluSx1|SINE|Alu	-54970	NM_001256686	283106	Hs.654675	NM_001256686	ENSG00000254598	CSNK2A3	CSNK2A1P	casein kinase 2 alpha 3	protein-coding	72.97	13.59	5.369389257	2.24E-23
chr11-425	chr11	11684899	11687252	+	39	2353	Intergenic	LTR75_1|LTR|ERV1	-7806	NR_036184	100423026		NR_036184	ENSG00000266645	MIR4299	-	microRNA 4299	ncRNA	39.04	5.82	6.70790378	2.56E-15
chr11-431	chr11	17628590	17630017	+	25	1427	"intron (NM_001292063, intron 33 of 55)"	"intron (NM_001292063, intron 33 of 55)"	60383	NM_001292063	340990	Hs.688380	NM_198497	ENSG00000188162	OTOG	DFNB18B|MLEMP|OTGN	otogelin	protein-coding	24.96	5.82	4.288659794	3.56E-07
chr11-432	chr11	19336328	19337592	+	21.1	1264	Intergenic	Intergenic	-35311	NM_001111018	89797	Hs.64341	NM_145117	ENSG00000166833	NAV2	HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2	neuron navigator 2	protein-coding	21.12	2.43	8.691358025	2.25E-10
chr11-438	chr11	35640680	35641680	+	20.5	1000	"exon (NM_014344, exon 1 of 1)"	"exon (NM_014344, exon 1 of 1)"	1445	NM_014344	24147	Hs.39384	NM_014344	ENSG00000179431	FJX1	-	four jointed box 1	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr11-439	chr11	45410119	45411119	+	19.2	1000	TTS (NR_122071)	TTS (NR_122071)	17671	NR_122071	399886	Hs.559970	NR_122071	ENSG00000255267	LOC399886	-	uncharacterized LOC399886	ncRNA	19.2	0.97	19.79381443	5.65E-15
chr11-440	chr11	45431246	45433981	+	39.7	2735	Intergenic	Intergenic	39665	NR_122071	399886	Hs.559970	NR_122071	ENSG00000255267	LOC399886	-	uncharacterized LOC399886	ncRNA	39.69	9.71	4.08753862	1.52E-10
chr11-451	chr11	66058968	66060504	+	21.8	1536	"intron (NM_153266, intron 1 of 1)"	CpG	363	NM_153266	256472	Hs.399779	NM_153266	ENSG00000179292	TMEM151A	TMEM151	transmembrane protein 151A	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr11-456	chr11	68080182	68082437	+	42.9	2255	"intron (NM_001291902, intron 1 of 22)"	"intron (NM_001291902, intron 1 of 22)"	1232	NM_002335	4041	Hs.6347	NM_002335	ENSG00000162337	LRP5	BMND1|EVR1|EVR4|HBM|LR3|LRP-5|LRP7|OPPG|OPS|OPTA1|VBCH2	LDL receptor related protein 5	protein-coding	42.89	8.74	4.907322654	5.23E-13
chr11-458	chr11	69867402	69868660	+	20.5	1258	Intergenic	Intergenic	41999	NR_120530	101928443	Hs.313468	NR_120529	ENSG00000248844	LOC101928443	-	uncharacterized LOC101928443	ncRNA	20.48	2.43	8.427983539	2.25E-10
chr11-46	chr11	16624079	16629184	+	89	5105	Intergenic	CpG	-128696	NM_033326	55553	Hs.368226	NM_017508	ENSG00000110693	SOX6	HSSOX6|SOXD	SRY-box 6	protein-coding	88.97	14.56	6.110576923	5.80E-31
chr11-460	chr11	69974491	69980004	+	74.2	5513	"intron (NM_018043, intron 10 of 25)"	"intron (NM_018043, intron 10 of 25)"	45731	NR_030691	55107	Hs.503074	NM_018043	ENSG00000131620	ANO1	DOG1|ORAOV2|TAOS2|TMEM16A	anoctamin 1	protein-coding	74.25	14.56	5.099587912	1.06E-22
chr11-462	chr11	72929364	72931835	+	38.4	2471	"intron (NM_176071, intron 1 of 2)"	"intron (NM_176071, intron 1 of 2)"	1097	NM_176071	5029	Hs.339	NM_002564	ENSG00000175591	P2RY2	HP2U|P2RU1|P2U|P2U1|P2UR|P2Y2|P2Y2R	purinergic receptor P2Y2	protein-coding	38.4	5.82	6.597938144	2.56E-15
chr11-464	chr11	76404120	76405710	+	27.5	1590	"intron (NR_024042, intron 17 of 20)"	"intron (NR_024042, intron 17 of 20)"	-23124	NM_001128922	2615	Hs.151641	NM_005512	ENSG00000137507	LRRC32	D11S833E|GARP	leucine rich repeat containing 32	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr11-466	chr11	85453548	85455347	+	32.6	1799	"intron (NM_001289608, intron 3 of 18)"	"intron (NM_001289608, intron 3 of 18)"	14665	NM_001162951	54843	Hs.369520	NM_032379	ENSG00000137501	SYTL2	CHR11SYT|EXO4|PPP1R151|SGA72M|SLP2|SLP2A	synaptotagmin like 2	protein-coding	32.64	4.85	6.729896907	5.03E-13
chr11-473	chr11	117561285	117562546	+	23.7	1261	"intron (NM_020693, intron 3 of 32)"	"intron (NM_020693, intron 3 of 32)"	106061	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr11-474	chr11	117742120	117747768	+	86.4	5648	"intron (NM_001164837, intron 1 of 8)"	L2c|LINE|L2	2802	NM_001204268	100533181	Hs.744850	NM_001204268	ENSG00000255245	FXYD6-FXYD2	-	FXYD6-FXYD2 readthrough	protein-coding	86.41	13.59	6.358351729	4.38E-31
chr11-483	chr11	123559608	123562191	+	42.9	2583	Intergenic	MLT1H1|LTR|ERVL-MaLR	-35584	NM_001040151	55800	Hs.4865	NM_018400	ENSG00000166257	SCN3B	ATFB16|BRGDA7|HSA243396|SCNB3	sodium voltage-gated channel beta subunit 3	protein-coding	42.89	10.19	4.209028459	2.83E-11
chr11-487	chr11	126413700	126415064	+	22.4	1364	"intron (NM_032531, intron 2 of 16)"	"intron (NM_032531, intron 2 of 16)"	-108291	NR_120532	101929427	Hs.600341	NR_120532	ENSG00000254607	LOC101929427	-	uncharacterized LOC101929427	ncRNA	22.4	3.88	5.773195876	2.53E-08
chr11-49	chr11	65666183	65668164	+	38.4	1981	"intron (NM_001300844, intron 1 of 2)"	CpG	824	NM_001300856	8061	Hs.283565	NM_005438	ENSG00000175592	FOSL1	FRA|FRA1|fra-1	"FOS like 1, AP-1 transcription factor subunit"	protein-coding	38.4	6.8	5.647058824	1.26E-13
chr11-492	chr11	131607398	131608729	+	21.8	1331	"intron (NM_001048209, intron 1 of 7)"	"intron (NM_001048209, intron 1 of 7)"	-74613	NR_126159	101929637	Hs.730330	NM_207432	ENSG00000224795	NTM-AS1	C11orf39	NTM antisense RNA 1	ncRNA	21.76	2.91	7.47766323	3.87E-10
chr11-505	chr11	1663483	1664483	+	19.2	1000	Intergenic	Intergenic	12950	NM_001001480	439915	Hs.653467	NM_001001480	ENSG00000185940	KRTAP5-5	KRTAP5-11|KRTAP5.5	keratin associated protein 5-5	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr11-519	chr11	2869112	2870112	+	19.8	1000	"3' UTR (NM_181798, exon 16 of 16)"	"3' UTR (NM_181798, exon 16 of 16)"	13187	NR_130721	338653	Hs.639425	NR_130721	ENSG00000229414	KCNQ1-AS1	-	KCNQ1 antisense RNA 1	ncRNA	19.84	3.4	5.835294118	1.47E-07
chr11-52	chr11	125151608	125153403	+	39	1795	"intron (NM_022062, intron 2 of 12)"	"intron (NM_022062, intron 2 of 12)"	117946	NM_022062	63876	Hs.278564	NM_022062	ENSG00000165495	PKNOX2	PREP2	PBX/knotted 1 homeobox 2	protein-coding	39.04	4.85	8.049484536	2.24E-17
chr11-521	chr11	6278141	6283296	+	78.7	5155	promoter-TSS (NM_176875)	promoter-TSS (NM_176875)	-186	NM_001318029	887	Hs.203	NM_176875	ENSG00000110148	CCKBR	CCK-B|CCK2R|GASR	cholecystokinin B receptor	protein-coding	78.73	12.62	6.238510301	5.12E-28
chr11-522	chr11	6340127	6341888	+	30.7	1761	"intron (NM_145040, intron 1 of 1)"	CpG	733	NM_145040	112464	Hs.434044	NM_145040	ENSG00000170955	PRKCDBP	CAVIN3|HSRBC|SRBC|cavin-3	protein kinase C delta binding protein	protein-coding	30.72	1.94	15.83505155	8.26E-21
chr11-524	chr11	8615401	8616712	+	21.8	1311	promoter-TSS (NM_001289061)	promoter-TSS (NM_001289061)	-220	NM_001289058	65975	Hs.501833	NM_030906	ENSG00000130413	STK33	-	serine/threonine kinase 33	protein-coding	21.76	3.4	6.4	3.73E-09
chr11-527	chr11	10724997	10725997	+	19.2	1000	Intergenic	Intergenic	-9962	NM_001206880	10335	Hs.501898	NM_130385	ENSG00000072952	MRVI1	IRAG|JAW1L	murine retrovirus integration site 1 homolog	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr11-529	chr11	15769973	15771583	+	28.2	1610	Intergenic	Intergenic	105347	NM_001293172	102724957	Hs.512245	NM_001293172	ENSG00000254695	LOC102724957	-	uncharacterized LOC102724957	protein-coding	28.16	3.88	7.257731959	1.97E-12
chr11-530	chr11	17499341	17500341	+	19.2	1000	Intergenic	L1M5|LINE|L1	-1449	NM_000352	6833	Hs.54470	NM_000352	ENSG00000006071	ABCC8	ABC36|HHF1|HI|HRINS|MRP8|PHHI|SUR|SUR1|SUR1delta2|TNDM2	ATP binding cassette subfamily C member 8	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr11-531	chr11	17765951	17767473	+	25.6	1522	"intron (NM_001112741, intron 1 of 3)"	"intron (NM_001112741, intron 1 of 3)"	9217	NM_004976	3746	Hs.552896	NM_004976	ENSG00000129159	KCNC1	EPM7|KV3.1|KV4|NGK2	potassium voltage-gated channel subfamily C member 1	protein-coding	25.6	0.97	26.39175258	7.61E-22
chr11-538	chr11	34264327	34265588	+	21.1	1261	"intron (NM_145804, intron 1 of 16)"	AluSx|SINE|Alu	114598	NM_145804	25841	Hs.23361	NM_145804	ENSG00000166016	ABTB2	ABTB2A|BTBD22	ankyrin repeat and BTB domain containing 2	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr11-546	chr11	46155712	46158542	+	48.6	2830	Intergenic	Intergenic	-14142	NM_016621	51317	Hs.502458	NM_016621	ENSG00000135365	PHF21A	BHC80|BM-006	PHD finger protein 21A	protein-coding	48.65	11.65	4.175965665	7.71E-13
chr11-549	chr11	46403470	46404755	+	24.3	1285	"intron (NR_073039, intron 2 of 3)"	CpG-4086	851	NM_001270551	4192	Hs.82045	NM_002391	ENSG00000110492	MDK	ARAP|MK|NEGF2	midkine (neurite growth-promoting factor 2)	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr11-553	chr11	57056220	57057473	+	21.1	1253	Intergenic	Intergenic	35567	NM_033396	85456	Hs.530730	NM_033396	ENSG00000149115	TNKS1BP1	TAB182	tankyrase 1 binding protein 1	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr11-557	chr11	60940912	60942523	+	28.2	1611	Intergenic	Intergenic	-12801	NM_017966	55048	Hs.523715	NM_017966	ENSG00000167987	VPS37C	-	"VPS37C, ESCRT-I subunit"	protein-coding	28.16	3.88	7.257731959	1.97E-12
chr11-559	chr11	61517910	61522165	+	65.9	4255	promoter-TSS (NM_001127392)	promoter-TSS (NM_001127392)	-72	NM_001127392	745	Hs.473109	NM_013279	ENSG00000124920	MYRF	C11orf9|MRF|Ndt80|pqn-47	myelin regulatory factor	protein-coding	65.93	8.74	7.543478261	2.79E-27
chr11-562	chr11	62690754	62692266	+	27.5	1512	Intergenic	Intergenic	-2498	NM_000738	1128	Hs.632119	NM_000738	ENSG00000168539	CHRM1	HM1|M1|M1R	cholinergic receptor muscarinic 1	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr11-563	chr11	63536565	63538413	+	38.4	1848	Intergenic	L2a|LINE|L2	-1376	NM_001144936	65998	Hs.191073	NM_001144936	ENSG00000188070	C11orf95	-	chromosome 11 open reading frame 95	protein-coding	38.4	0.97	39.58762887	4.39E-37
chr11-566	chr11	67133742	67135503	+	28.8	1761	"intron (NM_001166212, intron 2 of 2)"	"intron (NM_001166212, intron 2 of 2)"	6584	NM_013246	23529	Hs.502977	NM_013246	ENSG00000175505	CLCF1	BSF-3|BSF3|CISS2|CLC|NNT-1|NNT1|NR6	cardiotrophin-like cytokine factor 1	protein-coding	28.8	4.85	5.93814433	1.30E-10
chr11-57	chr11	10580011	10581665	+	31.4	1654	"exon (NM_006691, exon 6 of 6)"	"exon (NM_006691, exon 6 of 6)"	9527	NM_006691	10894	Hs.655332	NM_006691	ENSG00000133800	LYVE1	CRSBP-1|HAR|LYVE-1|XLKD1	lymphatic vessel endothelial hyaluronan receptor 1	protein-coding	31.36	3.88	8.082474227	3.25E-14
chr11-572	chr11	69935457	69938559	+	43.5	3102	"intron (NM_018043, intron 2 of 25)"	"intron (NM_018043, intron 2 of 25)"	5492	NR_030691	55107	Hs.503074	NM_018043	ENSG00000131620	ANO1	DOG1|ORAOV2|TAOS2|TMEM16A	anoctamin 1	protein-coding	43.53	8.25	5.276363636	2.15E-14
chr11-574	chr11	70761095	70762353	+	19.8	1258	"intron (NM_012309, intron 7 of 22)"	"intron (NM_012309, intron 7 of 22)"	-43251	NR_037437	100500844		NR_037437	ENSG00000263744	MIR3664	mir-3664	microRNA 3664	ncRNA	19.84	0.49	40.48979592	2.52E-19
chr11-585	chr11	86665268	86666268	+	19.8	1000	promoter-TSS (NR_038905)	promoter-TSS (NR_038905)	672	NM_012193	8322	Hs.591968	NM_012193	ENSG00000174804	FZD4	CD344|EVR1|FEVR|FZD4S|Fz-4|Fz4|FzE4|GPCR|hFz4	frizzled class receptor 4	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr11-586	chr11	94453007	94454007	+	19.2	1000	"intron (NR_135096, intron 1 of 6)"	"intron (NR_135096, intron 1 of 6)"	20014	NR_135093	105369438	Hs.568921	NR_135093	ENSG00000255929	LOC105369438	-	uncharacterized LOC105369438	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr11-587	chr11	109293202	109294454	+	23.7	1252	"intron (NM_207645, intron 1 of 1)"	CpG	982	NM_207645	399947	Hs.172982	NM_207645	ENSG00000185742	C11orf87	LOH11CR1A|NEURIM1	chromosome 11 open reading frame 87	protein-coding	23.68	3.4	6.964705882	5.45E-10
chr11-588	chr11	112182707	112183707	+	18.6	1000	"intron (NR_126004, intron 2 of 3)"	"intron (NR_126004, intron 2 of 3)"	41735	NR_126004	283140	Hs.651827	NR_126004	ENSG00000250303	LOC283140	-	uncharacterized LOC283140	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr11-590	chr11	113179144	113180144	+	17.3	1000	Intergenic	L2c|LINE|L2	-5607	NM_001318533	54970	Hs.288772	NM_017868	ENSG00000149292	TTC12	TPARM	tetratricopeptide repeat domain 12	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr11-596	chr11	117523207	117524207	+	19.8	1000	"intron (NM_020693, intron 3 of 32)"	"intron (NM_020693, intron 3 of 32)"	144269	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr11-598	chr11	117858271	117859910	+	27.5	1639	"intron (NR_026691, intron 2 of 7)"	"intron (NR_026691, intron 2 of 7)"	1984	NM_001558	3587	Hs.504035	NM_001558	ENSG00000110324	IL10RA	CD210|CD210a|CDW210A|HIL-10R|IL-10R1|IL10R	interleukin 10 receptor subunit alpha	protein-coding	27.52	4.37	6.297482838	1.19E-10
chr11-602	chr11	118502122	118505934	+	52.5	3812	"intron (NM_001144758, intron 9 of 22)"	"intron (NM_001144758, intron 9 of 22)"	-10690	NR_106773	102466719		NR_106773	ENSG00000019144	MIR6716	hsa-mir-6716	microRNA 6716	ncRNA	52.49	7.77	6.755469755	1.02E-20
chr11-604	chr11	119510471	119511471	+	19.8	1000	"intron (NM_203285, intron 5 of 7)"	"intron (NM_203285, intron 5 of 7)"	88464	NM_203286	5818	Hs.334846	NM_002855	ENSG00000110400	NECTIN1	CD111|CLPED1|ED4|HIgR|HV1S|HVEC|OFC7|PRR|PRR1|PVRL1|PVRR|PVRR1|SK-12|nectin-1	nectin cell adhesion molecule 1	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr11-607	chr11	119790489	119791778	+	21.8	1289	Intergenic	Intergenic	190840	NR_120587	102724301	Hs.637640	NR_120587	ENSG00000254854	LOC102724301	-	uncharacterized LOC102724301	ncRNA	21.76	1.94	11.21649485	8.00E-13
chr11-61	chr11	33796409	33798905	+	42.9	2496	TTS (NR_120550)	TTS (NR_120550)	1412	NR_120550	101928440	Hs.202343	NR_120550	ENSG00000254508	FBXO3-AS1	-	FBXO3 antisense RNA 1 (head to head)	ncRNA	42.89	8.74	4.907322654	5.23E-13
chr11-611	chr11	121111931	121113216	+	23.7	1285	Intergenic	MER52C|LTR|ERV1	-50815	NM_006918	6309	Hs.287749	NM_006918	ENSG00000109929	SC5D	ERG3|S5DES|SC5DL	sterol-C5-desaturase	protein-coding	23.68	3.4	6.964705882	5.45E-10
chr11-615	chr11	125005473	125006826	+	26.2	1353	Intergenic	Intergenic	-24490	NR_047586	219854	Hs.7626	NM_001080546	ENSG00000150433	TMEM218	-	transmembrane protein 218	protein-coding	26.24	3.4	7.717647059	9.95E-12
chr11-616	chr11	125147793	125149048	+	23	1255	"intron (NM_022062, intron 2 of 12)"	"intron (NM_022062, intron 2 of 12)"	113861	NM_022062	63876	Hs.278564	NM_022062	ENSG00000165495	PKNOX2	PREP2	PBX/knotted 1 homeobox 2	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr11-621	chr11	133034523	133035784	+	22.4	1261	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	-221490	NM_001319105	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr11-622	chr11	133669894	133671822	+	32	1928	"intron (NR_120444, intron 2 of 2)"	LTR16A1|LTR|ERVL	9413	NR_120444	646522	Hs.560000	NR_120444	ENSG00000255258	LOC646522	-	uncharacterized LOC646522	ncRNA	32	3.88	8.24742268	3.92E-15
chr11-624	chr11	134346683	134347683	+	18.6	1000	"intron (NR_033852, intron 3 of 5)"	"intron (NR_033852, intron 3 of 5)"	40807	NR_033852	283177	Hs.504390	NR_033852		LOC283177	-	uncharacterized LOC283177	ncRNA	18.56	0.49	37.87755102	9.96E-18
chr11-625	chr11	134424826	134427006	+	34.6	2180	Intergenic	MamGypLTR3|LTR|Gypsy	119540	NR_033852	283177	Hs.504390	NR_033852		LOC283177	-	uncharacterized LOC283177	ncRNA	34.56	4.85	7.125773196	1.02E-14
chr11-627	chr11	134620506	134622181	+	32	1675	Intergenic	MLT1H1|LTR|ERVL-MaLR	-233903	NR_135050	100507548	Hs.639995	NR_135050		LOC100507548	-	uncharacterized LOC100507548	ncRNA	32	5.82	5.498281787	2.32E-11
chr11-629	chr11	827874	835418	+	163.2	7544	"exon (NM_001286606, exon 9 of 9)"	"exon (NM_001286606, exon 9 of 9)"	-1306	NM_004357	977	Hs.654379	NM_004357	ENSG00000177697	CD151	GP27|MER2|PETA-3|RAPH|SFA1|TSPAN24	CD151 molecule (Raph blood group)	protein-coding	163.22	23.78	6.863751051	4.84E-61
chr11-636	chr11	2694936	2696192	+	21.1	1256	"non-coding (NR_002728, exon 1 of 1)"	"non-coding (NR_002728, exon 1 of 1)"	25664	NR_002728	10984	Hs.604823	NR_002728	ENSG00000269821	KCNQ1OT1	KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012	KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)	ncRNA	21.12	4.37	4.832951945	6.64E-07
chr11-637	chr11	2791609	2794993	+	55	3384	"intron (NM_000218, intron 12 of 15)"	"intron (NM_000218, intron 12 of 15)"	-72073	NR_002728	10984	Hs.604823	NR_002728	ENSG00000269821	KCNQ1OT1	KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012	KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)	ncRNA	55.05	11.16	4.932795699	9.34E-17
chr11-639	chr11	3663644	3664644	+	19.2	1000	promoter-TSS (NR_123732)	promoter-TSS (NR_123732)	-598	NM_001079536	116969	Hs.125680	NM_053017	ENSG00000167311	ART5	ARTC5	ADP-ribosyltransferase 5	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr11-641	chr11	4454563	4455893	+	22.4	1330	Intergenic	Intergenic	-15297	NM_001005172	119774	Hs.553568	NM_001005172	ENSG00000181963	OR52K2	OR11-7	olfactory receptor family 52 subfamily K member 2	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr11-652	chr11	11502043	11507532	+	67.8	5489	"intron (NM_198516, intron 1 of 10)"	L2b|LINE|L2	-129883	NM_001256686	283106	Hs.654675	NM_001256686	ENSG00000254598	CSNK2A3	CSNK2A1P	casein kinase 2 alpha 3	protein-coding	67.85	13.11	5.175438596	3.58E-21
chr11-655	chr11	12496834	12498254	+	17.9	1420	"intron (NM_018222, intron 3 of 12)"	"intron (NM_018222, intron 3 of 12)"	98518	NM_018222	55742	Hs.432914	NM_018222	ENSG00000197702	PARVA	CH-ILKBP|MXRA2	parvin alpha	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr11-662	chr11	15906402	15907944	+	25	1542	Intergenic	Intergenic	83994	NR_106721	102464826		NR_106721	ENSG00000110693	MIR6073	hsa-mir-6073	microRNA 6073	ncRNA	24.96	5.34	4.674157303	9.72E-08
chr11-664	chr11	17554963	17556281	+	23.7	1318	"intron (NR_123738, intron 1 of 19)"	"intron (NR_123738, intron 1 of 19)"	10341	NM_153676	10083	Hs.502072	NM_005709	ENSG00000006611	USH1C	AIE-75|DFNB18|DFNB18A|NY-CO-37|NY-CO-38|PDZ-45|PDZ-73|PDZ-73/NY-CO-38|PDZ73|PDZD7C|ush1cpst	USH1 protein network component harmonin	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr11-666	chr11	17659464	17660464	+	18.6	1000	"intron (NM_001292063, intron 47 of 55)"	"intron (NM_001292063, intron 47 of 55)"	58522	NR_132279	102723330	Hs.471111	NR_132279	ENSG00000255335	LOC102723330	-	uncharacterized LOC102723330	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr11-668	chr11	18935131	18936131	+	18.6	1000	Intergenic	MER2|DNA|TcMar-Tigger	20918	NM_147199	259249	Hs.711459	NM_147199	ENSG00000170255	MRGPRX1	GPCR|MGRG2|MRGX1|SNSR4	MAS related GPR family member X1	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr11-669	chr11	19096395	19097648	+	17.9	1253	Intergenic	Intergenic	-14793	NM_054030	117194	Hs.350566	NM_054030	ENSG00000183695	MRGPRX2	MGRG3|MRGX2	MAS related GPR family member X2	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr11-67	chr11	117917836	117919088	+	25	1252	"intron (NR_038318, intron 2 of 3)"	"intron (NR_038318, intron 2 of 3)"	-29265	NM_019894	56649	Hs.161985	NM_019894	ENSG00000137648	TMPRSS4	CAPH2|MT-SP2|TMPRSS3	"transmembrane protease, serine 4"	protein-coding	24.96	2.43	10.27160494	2.59E-13
chr11-671	chr11	20202808	20204145	+	19.2	1337	Intergenic	L1ME2|LINE|L1	-21606	NM_001029865	120237	Hs.558604	NM_001029865	ENSG00000109851	DBX1	-	developing brain homeobox 1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr11-672	chr11	27720764	27721764	+	19.2	1000	promoter-TSS (NM_170734)	promoter-TSS (NM_170734)	-50	NM_170734	627	Hs.502182	NM_001709	ENSG00000176697	BDNF	ANON2|BULN2	brain derived neurotrophic factor	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr11-678	chr11	34656323	34657670	+	23	1347	"intron (NM_001206616, intron 1 of 8)"	AluSq2|SINE|Alu	2985	NM_001206616	26298	Hs.653859	NM_012153	ENSG00000135373	EHF	ESE3|ESE3B|ESEJ	ETS homologous factor	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr11-680	chr11	34844365	34845936	+	26.2	1571	Intergenic	Intergenic	-92527	NM_001135024	8050	Hs.502315	NM_003477	ENSG00000110435	PDHX	DLDBP|E3BP|OPDX|PDX1|proX	pyruvate dehydrogenase complex component X	protein-coding	26.24	4.85	5.410309278	4.26E-09
chr11-684	chr11	44092786	44093786	+	19.2	1000	"intron (NM_032592, intron 3 of 14)"	MER63B|DNA|hAT-Blackjack	5474	NM_032592	84680	Hs.126706	NM_032592	ENSG00000110455	ACCS	ACS|PHACS	1-aminocyclopropane-1-carboxylate synthase homolog (inactive)	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr11-685	chr11	44533412	44534412	+	17.9	1000	Intergenic	Intergenic	-53229	NM_002231	3732	Hs.527778	NM_002231	ENSG00000085117	CD82	4F9|C33|GR15|IA4|KAI1|R2|SAR2|ST6|TSPAN27	CD82 molecule	protein-coding	17.92	0	18.4597065	9.96E-18
chr11-686	chr11	44950470	44953079	+	41.6	2609	"3' UTR (NM_130783, exon 9 of 9)"	"3' UTR (NM_130783, exon 9 of 9)"	19985	NM_001318384	9537	Hs.554791	NM_006034	ENSG00000175274	TP53I11	PIG11	tumor protein p53 inducible protein 11	protein-coding	41.61	1.46	28.5	7.78E-35
chr11-691	chr11	45685506	45687891	+	45.4	2385	"intron (NM_003654, intron 1 of 3)"	CpG	508	NM_003654	8534	Hs.104576	NM_003654	ENSG00000175264	CHST1	C6ST|GST-1|KS6ST|KSGal6ST|KSST	carbohydrate sulfotransferase 1	protein-coding	45.45	4.37	10.40045767	1.60E-23
chr11-693	chr11	45823884	45826137	+	40.3	2253	promoter-TSS (NM_001145265)	promoter-TSS (NM_001145265)	-613	NM_001145265	55343	Hs.12211	NM_018389	ENSG00000181830	SLC35C1	CDG2C|FUCT1	solute carrier family 35 member C1	protein-coding	40.33	6.8	5.930882353	2.14E-14
chr11-696	chr11	47207800	47209543	+	34.6	1743	promoter-TSS (NM_001184974)	promoter-TSS (NM_001184974)	-661	NM_001184974	29763	Hs.334639	NM_016223	ENSG00000165912	PACSIN3	SDPIII	protein kinase C and casein kinase substrate in neurons 3	protein-coding	34.56	3.88	8.907216495	5.09E-17
chr11-705	chr11	62977297	62978642	+	23.7	1345	"intron (NM_199352, intron 4 of 8)"	HERV15-int|LTR|ERV1	19155	NM_199352	387601	Hs.332119	NM_199352	ENSG00000196600	SLC22A25	HIMTP|UST6	solute carrier family 22 member 25	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr11-710	chr11	67325638	67329596	+	53.1	3958	Intergenic	Intergenic	-23449	NM_000852	2950	Hs.523836	NM_000852	ENSG00000084207	GSTP1	DFN7|FAEES3|GST3|GSTP|HEL-S-22|PI	glutathione S-transferase pi 1	protein-coding	53.13	13.11	4.052631579	3.69E-13
chr11-711	chr11	67617686	67618686	+	19.2	1000	Intergenic	HERVE-int|LTR|ERV1	-45379	NR_024249	645332	Hs.535094	NR_024249	ENSG00000160172	FAM86C2P	-	"family with sequence similarity 86, member A pseudogene"	pseudo	19.2	0	19.77825696	2.52E-19
chr11-72	chr11	1593728	1595160	+	32	1432	"intron (NR_021489, intron 1 of 1)"	"intron (NR_021489, intron 1 of 1)"	473	NR_021489	338651	Hs.633229	NR_021489	ENSG00000233930	KRTAP5-AS1	-	KRTAP5-1/KRTAP5-2 antisense RNA 1	ncRNA	32	6.8	4.705882353	5.32E-10
chr11-720	chr11	69833767	69834767	+	19.2	1000	Intergenic	Intergenic	75763	NR_120530	101928443	Hs.313468	NR_120529	ENSG00000248844	LOC101928443	-	uncharacterized LOC101928443	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr11-721	chr11	70015674	70016674	+	17.3	1000	"intron (NM_018043, intron 21 of 25)"	"intron (NM_018043, intron 21 of 25)"	-33095	NM_003824	8772	Hs.86131	NM_003824	ENSG00000168040	FADD	GIG3|MORT1	Fas associated via death domain	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr11-724	chr11	74857534	74858534	+	19.2	1000	Intergenic	AluJo|SINE|Alu	-3998	NM_001145212	11309	Hs.7884	NM_007256	ENSG00000137491	SLCO2B1	OATP-B|OATP2B1|OATPB|SLC21A9	solute carrier organic anion transporter family member 2B1	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr11-725	chr11	75427384	75429034	+	26.2	1650	promoter-TSS (NM_025098)	promoter-TSS (NM_025098)	-655	NM_025098	80168	Hs.288568	NM_025098	ENSG00000166391	MOGAT2	DGAT2L5|DGAT2L5.|MGAT2|hDC5	monoacylglycerol O-acyltransferase 2	protein-coding	26.24	1.94	13.5257732	4.03E-16
chr11-728	chr11	78665769	78667123	+	26.2	1354	"intron (NM_001098816, intron 6 of 33)"	"intron (NM_001098816, intron 6 of 33)"	-380537	NM_024678	79731	Hs.503389	NM_024678	ENSG00000137513	NARS2	DFNB94|SLM5|asnRS	"asparaginyl-tRNA synthetase 2, mitochondrial (putative)"	protein-coding	26.24	5.34	4.913857678	2.00E-08
chr11-731	chr11	94397044	94398732	+	29.4	1688	"intron (NR_135096, intron 4 of 6)"	"intron (NR_135096, intron 4 of 6)"	75633	NR_135093	105369438	Hs.568921	NR_135093	ENSG00000255929	LOC105369438	-	uncharacterized LOC105369438	ncRNA	29.44	6.31	4.665610143	3.01E-09
chr11-735	chr11	110432216	110433958	+	30.1	1742	Intergenic	Intergenic	132426	NM_004109	2230	Hs.744	NM_004109	ENSG00000137714	FDX1	ADX|FDX|LOH11CR1D	ferredoxin 1	protein-coding	30.08	6.8	4.423529412	1.16E-08
chr11-740	chr11	113879879	113880879	+	17.9	1000	Intergenic	AluSx|SINE|Alu	32157	NM_001161772	3359	Hs.413899	NM_000869	ENSG00000166736	HTR3A	5-HT-3|5-HT3A|5-HT3R|5HT3R|HTR3	5-hydroxytryptamine receptor 3A	protein-coding	17.92	1.46	12.2739726	2.41E-11
chr11-749	chr11	117573032	117574402	+	19.8	1370	"intron (NM_020693, intron 3 of 32)"	"intron (NM_020693, intron 3 of 32)"	94259	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr11-753	chr11	117771136	117772136	+	18.6	1000	"3' UTR (NM_001077263, exon 13 of 13)"	"3' UTR (NM_001077263, exon 13 of 13)"	-23435	NM_001164831	53826	Hs.744850	NM_022003	ENSG00000137726	FXYD6	-	FXYD domain containing ion transport regulator 6	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr11-754	chr11	117950678	117952217	+	27.5	1539	"intron (NM_001173552, intron 1 of 11)"	"intron (NM_001173552, intron 1 of 11)"	3720	NM_001173552	56649	Hs.161985	NM_019894	ENSG00000137648	TMPRSS4	CAPH2|MT-SP2|TMPRSS3	"transmembrane protease, serine 4"	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr11-755	chr11	118029941	118030941	+	17.9	1000	Intergenic	Intergenic	-6811	NM_001142348	6330	Hs.65239	NM_174934	ENSG00000177098	SCN4B	ATFB17|LQT10|Navbeta4	sodium voltage-gated channel beta subunit 4	protein-coding	17.92	0	18.4597065	9.96E-18
chr11-756	chr11	118036449	118042106	+	87.1	5657	"intron (NM_004588, intron 2 of 3)"	"intron (NM_004588, intron 2 of 3)"	8060	NM_004588	6327	Hs.129783	NM_004588	ENSG00000149575	SCN2B	ATFB14	sodium voltage-gated channel beta subunit 2	protein-coding	87.05	14.56	5.978708791	3.53E-30
chr11-760	chr11	119319815	119321087	+	22.4	1272	"intron (NR_034160, intron 2 of 3)"	MLT1B|LTR|ERVL-MaLR	-24756	NM_001311162	7070	Hs.644697	NM_006288	ENSG00000154096	THY1	CD90|CDw90	Thy-1 cell surface antigen	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr11-767	chr11	120129864	120130864	+	17.3	1000	"intron (NR_038829, intron 3 of 7)"	"intron (NR_038829, intron 3 of 7)"	6277	NR_038829	649133	Hs.568902	NR_038829	ENSG00000259541	LOC649133	-	uncharacterized LOC649133	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr11-768	chr11	120379356	120380959	+	29.4	1603	Intergenic	Intergenic	-2298	NM_014619	2900	Hs.538738	NM_014619	ENSG00000149403	GRIK4	EAA1|GRIK|GluK4|KA1	glutamate ionotropic receptor kainate type subunit 4	protein-coding	29.44	0	30.32666067	5.44E-33
chr11-770	chr11	120831676	120833055	+	20.5	1379	"intron (NM_001282470, intron 16 of 19)"	"intron (NM_001282470, intron 16 of 19)"	-3617	NR_133004	101929208	Hs.662310	NR_133004		LOC101929208	-	uncharacterized LOC101929208	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr11-774	chr11	123038110	123040532	+	39.7	2422	"intron (NM_024769, intron 1 of 6)"	"intron (NM_024769, intron 1 of 6)"	26692	NM_024769	79827	Hs.591949	NM_024769	ENSG00000166250	CLMP	ACAM|ASAM|CSBM|CSBS	CXADR like membrane protein	protein-coding	39.69	3.88	10.22938144	5.62E-21
chr11-775	chr11	124591278	124593219	+	33.3	1941	Intergenic	Intergenic	-17581	NM_001126181	4900	Hs.524116	NM_006176	ENSG00000154146	NRGN	RC3|hng	neurogranin	protein-coding	33.28	4.85	6.86185567	7.28E-14
chr11-779	chr11	124770877	124772176	+	21.1	1299	Intergenic	Intergenic	-3695	NM_001301088	54538	Hs.524121	NM_019055	ENSG00000154133	ROBO4	ECSM4|MRB	roundabout guidance receptor 4	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr11-780	chr11	125027390	125028390	+	18.6	1000	TTS (NR_125759)	TTS (NR_125759)	6615	NR_125759	103695364	Hs.576940	NR_125759	ENSG00000254880	PKNOX2-AS1	-	PKNOX2 antisense RNA 1 (head to head)	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr11-784	chr11	125204356	125205635	+	22.4	1279	"intron (NM_022062, intron 3 of 12)"	"intron (NM_022062, intron 3 of 12)"	-160115	NM_001301851	403312	Hs.450611	NM_203452		LOC403312	-	putative uncharacterized protein MGC39545	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr11-789	chr11	126855479	126856479	+	17.3	1000	"intron (NM_032531, intron 1 of 16)"	"intron (NM_032531, intron 1 of 16)"	2459	NR_036126	100422918		NR_036126	ENSG00000266215	MIR3167	-	microRNA 3167	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr11-792	chr11	127808747	127809999	+	21.1	1252	Intergenic	LTR37B|LTR|ERV1	582832	NM_005238	2113	Hs.369438	NM_005238	ENSG00000134954	ETS1	ETS-1|EWSR2|c-ets-1|p54	"ETS proto-oncogene 1, transcription factor"	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr11-793	chr11	128752471	128754150	+	35.2	1679	Intergenic	HAL1|LINE|L1	-8003	NM_000890	3762	Hs.444595	NM_000890	ENSG00000120457	KCNJ5	CIR|GIRK4|KATP1|KIR3.4|LQT13	potassium voltage-gated channel subfamily J member 5	protein-coding	35.2	4.85	7.257731959	1.02E-14
chr11-795	chr11	129628458	129629713	+	21.1	1255	Intergenic	Intergenic	-56591	NM_138788	120224	Hs.504301	NM_138788	ENSG00000151715	TMEM45B	-	transmembrane protein 45B	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr11-797	chr11	133016381	133017729	+	23	1348	"intron (NM_001012393, intron 1 of 7)"	"intron (NM_001012393, intron 1 of 7)"	-203392	NM_001319105	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	23.04	0.97	23.75257732	5.03E-19
chr11-800	chr11	133520398	133521398	+	19.2	1000	Intergenic	Intergenic	-118391	NM_001319104	4978	Hs.4817	NM_002545	ENSG00000183715	OPCML	IGLON1|OBCAM|OPCM	opioid binding protein/cell adhesion molecule like	protein-coding	19.2	0	19.77825696	2.52E-19
chr11-801	chr11	133679283	133680283	+	18.6	1000	"intron (NR_120444, intron 2 of 2)"	"intron (NR_120444, intron 2 of 2)"	488	NR_120444	646522	Hs.560000	NR_120444	ENSG00000255258	LOC646522	-	uncharacterized LOC646522	ncRNA	18.56	4.37	4.247139588	1.41E-05
chr11-802	chr11	133715845	133716845	+	19.2	1000	promoter-TSS (NM_001291992)	promoter-TSS (NM_001291992)	-912	NM_001291992	219938	Hs.97541	NM_174927	ENSG00000166118	SPATA19	CT132|SPAS1|spergen1	spermatogenesis associated 19	protein-coding	19.2	1.46	13.15068493	1.82E-12
chr11-803	chr11	133878083	133879708	+	29.4	1625	Intergenic	Intergenic	-23272	NR_027276	100128239	Hs.423734	NR_027276	ENSG00000204241	LOC100128239	-	uncharacterized LOC100128239	ncRNA	29.44	4.85	6.070103093	2.13E-11
chr11-805	chr11	193668	194668	+	17.9	1000	"intron (NM_145651, intron 2 of 2)"	(CA)n|Simple_repeat|Simple_repeat	1088	NM_145651	147199	Hs.127059	NM_145651	ENSG00000188076	SCGB1C1	RYD5	secretoglobin family 1C member 1	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr11-808	chr11	1136190	1137190	+	17.9	1000	Intergenic	L1MDa|LINE|L1	-14890	NM_001304359	4586	Hs.534332	NM_017511	ENSG00000215182	MUC5AC	MUC5|TBM|leB|mucin	"mucin 5AC, oligomeric mucus/gel-forming"	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr11-810	chr11	1561486	1563028	+	25	1542	Intergenic	MLT1C|LTR|ERVL-MaLR	30893	NM_004420	1850	Hs.41688	NM_004420	ENSG00000184545	DUSP8	C11orf81|HB5|HVH-5|HVH8	dual specificity phosphatase 8	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr11-811	chr11	1565101	1566101	+	17.9	1000	Intergenic	Intergenic	27549	NM_004420	1850	Hs.41688	NM_004420	ENSG00000184545	DUSP8	C11orf81|HB5|HVH-5|HVH8	dual specificity phosphatase 8	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr11-815	chr11	1998288	1999288	+	15.4	1000	Intergenic	Intergenic	12362	NR_024471	100133545	Hs.677620	NR_024471	ENSG00000226416	MRPL23-AS1	-	MRPL23 antisense RNA 1	ncRNA	15.36	0	15.82260557	1.26E-14
chr11-816	chr11	2009623	2014356	+	76.2	4733	promoter-TSS (NR_024471)	promoter-TSS (NR_024471)	-337	NR_126400	104355220	Hs.17666	NR_126400	ENSG00000232987	LINC01219	-	long intergenic non-protein coding RNA 1219	ncRNA	76.17	10.68	7.132022472	4.50E-30
chr11-821	chr11	2118932	2119932	+	18.6	1000	Intergenic	Intergenic	36007	NR_030158	619552		NR_030158	ENSG00000207805	MIR483	MIRN483|hsa-mir-483|mir-483	microRNA 483	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr11-825	chr11	2578676	2579676	+	16.6	1000	"intron (NM_000218, intron 2 of 15)"	L1M5|LINE|L1	96492	NM_181798	3784	Hs.95162	NM_000218	ENSG00000053918	KCNQ1	ATFB1|ATFB3|JLNS1|KCNA8|KCNA9|KVLQT1|Kv1.9|Kv7.1|LQT|LQT1|RWS|SQT2|WRS	potassium voltage-gated channel subfamily Q member 1	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr11-827	chr11	2615335	2616335	+	17.9	1000	"intron (NM_000218, intron 10 of 15)"	L1MEd|LINE|L1	105393	NR_002728	10984	Hs.604823	NR_002728	ENSG00000269821	KCNQ1OT1	KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012	KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr11-83	chr11	69077754	69079009	+	23.7	1255	Intergenic	MIR|SINE|MIR	16776	NM_001300924	26579	Hs.523848	NM_138768	ENSG00000172927	MYEOV	OCIM	myeloma overexpressed	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr11-831	chr11	2797509	2805667	+	140.2	8158	"intron (NM_000218, intron 15 of 15)"	"intron (NM_000218, intron 15 of 15)"	-80360	NR_002728	10984	Hs.604823	NR_002728	ENSG00000269821	KCNQ1OT1	KCNQ1-AS2|KCNQ10T1|Kncq1|KvDMR1|KvLQT1-AS|LIT1|NCRNA00012	KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)	ncRNA	140.18	25.24	5.553882726	3.16E-44
chr11-833	chr11	3215914	3216914	+	18.6	1000	Intergenic	MIRb|SINE|MIR	-23148	NR_027138	283303	Hs.151154	NM_173590	ENSG00000236301	MRGPRG-AS1	C11orf36|HSD-40	MRGPRG antisense RNA 1	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr11-835	chr11	4467925	4468925	+	17.9	1000	Intergenic	L2c|LINE|L2	-2100	NM_001005172	119774	Hs.553568	NM_001005172	ENSG00000181963	OR52K2	OR11-7	olfactory receptor family 52 subfamily K member 2	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr11-836	chr11	8271909	8273172	+	23.7	1263	"intron (NM_001270428, intron 1 of 3)"	"intron (NM_001270428, intron 1 of 3)"	12885	NR_073006	4004	Hs.654426	NM_002315	ENSG00000166407	LMO1	RBTN1|RHOM1|TTG1	LIM domain only 1	protein-coding	23.68	5.34	4.434456929	4.49E-07
chr11-838	chr11	8807553	8808553	+	17.9	1000	"intron (NR_120590, intron 3 of 4)"	"intron (NR_120590, intron 3 of 4)"	17728	NR_120590	102724784	Hs.613276	NR_120590		LOC102724784	-	uncharacterized LOC102724784	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr11-839	chr11	9023261	9026964	+	60.8	3703	"intron (NM_020645, intron 1 of 6)"	CpG	484	NM_020645	56675	Hs.523467	NM_020645	ENSG00000175352	NRIP3	C11orf14|NY-SAR-105	nuclear receptor interacting protein 3	protein-coding	60.81	10.19	5.967615309	3.60E-21
chr11-84	chr11	76776291	76777553	+	26.2	1262	Intergenic	LTR39|LTR|ERV1	-1070	NM_004055	726	Hs.248153	NM_004055	ENSG00000149260	CAPN5	ADNIV|HTRA3|VRNI|nCL-3	calpain 5	protein-coding	26.24	2.43	10.79835391	2.44E-14
chr11-845	chr11	10737693	10740561	+	44.2	2868	Intergenic	Intergenic	-23592	NM_001206880	10335	Hs.501898	NM_130385	ENSG00000072952	MRVI1	IRAG|JAW1L	murine retrovirus integration site 1 homolog	protein-coding	44.17	9.71	4.548918641	1.81E-12
chr11-849	chr11	11450450	11451450	+	18.6	1000	"intron (NM_198516, intron 3 of 10)"	"intron (NM_198516, intron 3 of 10)"	-76046	NM_001256686	283106	Hs.654675	NM_001256686	ENSG00000254598	CSNK2A3	CSNK2A1P	casein kinase 2 alpha 3	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr11-852	chr11	12579565	12580816	+	19.2	1251	Intergenic	Intergenic	-115779	NM_021961	7003	Hs.655331	NM_021961	ENSG00000187079	TEAD1	AA|NTEF-1|REF1|TCF-13|TCF13|TEAD-1|TEF-1	TEA domain transcription factor 1	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr11-854	chr11	13342880	13344423	+	23.7	1543	"intron (NM_001030272, intron 2 of 18)"	MIRb|SINE|MIR	44377	NM_001297722	406	Hs.65734	NM_001178	ENSG00000133794	ARNTL	BMAL1|BMAL1c|JAP3|MOP3|PASD3|TIC|bHLHe5	aryl hydrocarbon receptor nuclear translocator like	protein-coding	23.68	4.37	5.418764302	2.46E-08
chr11-868	chr11	34338083	34339083	+	18.6	1000	"intron (NM_145804, intron 1 of 16)"	"intron (NM_145804, intron 1 of 16)"	40972	NM_145804	25841	Hs.23361	NM_145804	ENSG00000166016	ABTB2	ABTB2A|BTBD22	ankyrin repeat and BTB domain containing 2	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr11-869	chr11	34584659	34585659	+	17.3	1000	Intergenic	LTR33|LTR|ERVL	-49812	NM_001243080	2001	Hs.11713	NM_001422	ENSG00000135374	ELF5	ESE2	E74 like ETS transcription factor 5	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr11-874	chr11	43599578	43601494	+	33.9	1916	Intergenic	Intergenic	-2408	NR_029697	406918		NR_029697	ENSG00000199077	MIR129-2	MIR-129b|MIRN129-2|mir-129-2	microRNA 129-2	ncRNA	33.92	1.46	23.23287671	2.36E-26
chr11-883	chr11	45788464	45790249	+	32	1785	Intergenic	MLT1K|LTR|ERVL-MaLR	-3627	NR_027134	374387	Hs.632142	NM_199137	ENSG00000205106	DKFZp779M0652	-	uncharacterized DKFZp779M0652	ncRNA	32	6.8	4.705882353	5.32E-10
chr11-888	chr11	58939744	58941543	+	28.8	1799	"intron (NM_015177, intron 1 of 8)"	"intron (NM_015177, intron 1 of 8)"	831	NM_015177	23220	Hs.523696	NM_015177	ENSG00000110042	DTX4	RNF155	deltex E3 ubiquitin ligase 4	protein-coding	28.8	1.94	14.84536082	1.99E-18
chr11-889	chr11	60527042	60529177	+	34.6	2135	"intron (NM_152717, intron 1 of 5)"	HERVK22-int|LTR|ERVK	3769	NR_103481	219995	Hs.207465	NM_152717	ENSG00000166961	MS4A15	-	membrane spanning 4-domains A15	protein-coding	34.56	6.31	5.477020602	4.08E-12
chr11-89	chr11	122791763	122793035	+	25	1272	"intron (NM_024806, intron 3 of 8)"	"intron (NM_024806, intron 3 of 8)"	39163	NM_199124	79864	Hs.164705	NM_024806	ENSG00000109944	C11orf63	-	chromosome 11 open reading frame 63	protein-coding	24.96	0.97	25.73195876	2.01E-20
chr11-890	chr11	60694493	60697957	+	56.3	3464	"exon (NM_017870, exon 4 of 11)"	"exon (NM_017870, exon 4 of 11)"	4312	NM_017870	54972	Hs.118552	NM_017870	ENSG00000006118	TMEM132A	GBP|HSPA5BP1	transmembrane protein 132A	protein-coding	56.33	8.74	6.445080092	2.41E-21
chr11-895	chr11	61682412	61683412	+	17.3	1000	"intron (NM_001271686, intron 1 of 8)"	"intron (NM_001271686, intron 1 of 8)"	2169	NM_013401	5866	Hs.13759	NM_013401	ENSG00000167994	RAB3IL1	GRAB	RAB3A interacting protein like 1	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr11-897	chr11	62311177	62315755	+	65.9	4578	promoter-TSS (NM_001346446)	promoter-TSS (NM_001346446)	-228	NM_001346445	79026	Hs.502756	NM_001620	ENSG00000124942	AHNAK	AHNAKRS|PM227	AHNAK nucleoprotein	protein-coding	65.93	11.65	5.659227468	7.10E-22
chr11-90	chr11	124577104	124579349	+	42.9	2245	Intergenic	Intergenic	-31603	NM_001126181	4900	Hs.524116	NM_006176	ENSG00000154146	NRGN	RC3|hng	neurogranin	protein-coding	42.89	3.88	11.05412371	4.87E-23
chr11-901	chr11	62800173	62801173	+	17.9	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	-17356	NM_001184736	9376	Hs.266223	NM_004254	ENSG00000149452	SLC22A8	OAT3	solute carrier family 22 member 8	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr11-905	chr11	64234304	64235565	+	20.5	1261	Intergenic	AluSz|SINE|Alu	18405	NR_073177	100996455	Hs.634142	NR_073177	ENSG00000181908	LOC100996455	-	uncharacterized LOC100996455	ncRNA	20.48	1.94	10.55670103	9.02E-12
chr11-913	chr11	66783216	66784216	+	18.6	1000	Intergenic	AluSx|SINE|Alu	-6474	NM_001318773	91683	Hs.287636	NM_177963	ENSG00000173227	SYT12	SYT11|sytXII	synaptotagmin 12	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr11-917	chr11	67527651	67528651	+	17.9	1000	Intergenic	HERVH-int|LTR|ERV1	44656	NR_024249	645332	Hs.535094	NR_024249	ENSG00000160172	FAM86C2P	-	"family with sequence similarity 86, member A pseudogene"	pseudo	17.92	2.43	7.374485597	1.53E-08
chr11-918	chr11	68471682	68472682	+	18.6	1000	Intergenic	Intergenic	20239	NM_015973	51083	Hs.278959	NM_015973	ENSG00000069482	GAL	ETL8|GAL-GMAP|GALN|GLNN|GMAP	galanin and GMAP prepropeptide	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr11-919	chr11	69209120	69210120	+	17.9	1000	Intergenic	Intergenic	-30819	NM_001319657	102724265	Hs.448669	NM_001319657	ENSG00000255980	LOC102724265	-	uncharacterized LOC102724265	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr11-920	chr11	69451987	69459389	+	124.2	7402	promoter-TSS (NM_053056)	promoter-TSS (NM_053056)	-185	NM_053056	595	Hs.523852	NM_053056	ENSG00000110092	CCND1	BCL1|D11S287E|PRAD1|U21B31	cyclin D1	protein-coding	124.18	10.68	11.62734082	6.21E-67
chr11-923	chr11	69600507	69603713	+	39.7	3206	Intergenic	AluSp|SINE|Alu	-11939	NM_002007	2249	Hs.1755	NM_002007	ENSG00000075388	FGF4	HBGF-4|HST|HST-1|HSTF1|K-FGF|KFGF	fibroblast growth factor 4	protein-coding	39.69	3.88	10.22938144	5.62E-21
chr11-924	chr11	69632052	69633052	+	17.9	1000	"intron (NM_005247, intron 1 of 2)"	CpG	1640	NM_005247	2248	Hs.37092	NM_005247	ENSG00000186895	FGF3	HBGF-3|INT2	fibroblast growth factor 3	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr11-926	chr11	69800217	69801217	+	18.6	1000	Intergenic	AluSx1|SINE|Alu	109313	NR_120530	101928443	Hs.313468	NR_120529	ENSG00000248844	LOC101928443	-	uncharacterized LOC101928443	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr11-929	chr11	70279918	70280918	+	16.6	1000	"intron (NM_005231, intron 17 of 17)"	"intron (NM_005231, intron 17 of 17)"	35806	NM_138565	2017	Hs.596164	NM_005231	ENSG00000085733	CTTN	EMS1	cortactin	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr11-93	chr11	124712108	124715046	+	53.1	2938	Intergenic	MIRb|SINE|MIR	-21728	NM_022370	64221	Hs.435621	NM_022370	ENSG00000154134	ROBO3	HGPPS|HGPS|RBIG1|RIG1	roundabout guidance receptor 3	protein-coding	53.13	12.62	4.209984152	1.13E-13
chr11-931	chr11	72175667	72178564	+	44.2	2897	Intergenic	AluSx|SINE|Alu	-31387	NM_001258392	81570	Hs.523877	NM_030813	ENSG00000162129	CLPB	ANKCLB|HSP78|MEGCANN|MGCA7|SKD3	"ClpB homolog, mitochondrial AAA ATPase chaperonin"	protein-coding	44.17	2.43	18.17695473	1.50E-30
chr11-94	chr11	126541331	126542331	+	23	1000	"intron (NR_120533, intron 1 of 1)"	L1MC3|LINE|L1	15850	NR_120533	101929427	Hs.600341	NR_120532	ENSG00000254607	LOC101929427	-	uncharacterized LOC101929427	ncRNA	23.04	4.85	4.750515464	1.15E-07
chr11-941	chr11	76891816	76893082	+	22.4	1266	"exon (NM_000260, exon 23 of 49)"	"exon (NM_000260, exon 23 of 49)"	53133	NM_001127180	4647	Hs.370421	NM_000260	ENSG00000137474	MYO7A	DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B	myosin VIIA	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr11-952	chr11	106887719	106890739	+	50.6	3020	promoter-TSS (NM_000855)	promoter-TSS (NM_000855)	-58	NM_001256424	2977	Hs.24321	NM_000855	ENSG00000152402	GUCY1A2	GC-SA2|GUC1A2	guanylate cyclase 1 soluble subunit alpha 2	protein-coding	50.57	9.22	5.484815618	1.24E-16
chr11-953	chr11	108367738	108369845	+	35.8	2107	"intron (NM_153705, intron 1 of 7)"	CpG	368	NM_153705	143888	Hs.83286	NM_153705	ENSG00000178202	KDELC2	-	KDEL motif containing 2	protein-coding	35.84	5.82	6.158075601	1.09E-13
chr11-956	chr11	110442978	110444390	+	21.8	1412	Intergenic	L1MDa|LINE|L1	139089	NM_001258415	57569	Hs.6136	NM_020809	ENSG00000137727	ARHGAP20	RARHOGAP	Rho GTPase activating protein 20	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr11-957	chr11	113846460	113847460	+	17.3	1000	"intron (NR_046363, intron 1 of 7)"	"intron (NR_046363, intron 1 of 7)"	1163	NM_213621	3359	Hs.413899	NM_000869	ENSG00000166736	HTR3A	5-HT-3|5-HT3A|5-HT3R|5HT3R|HTR3	5-hydroxytryptamine receptor 3A	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr11-958	chr11	113952493	113954069	+	23.7	1576	"intron (NM_001018011, intron 2 of 6)"	"intron (NM_001018011, intron 2 of 6)"	21993	NM_001018011	7704	Hs.591945	NM_006006	ENSG00000109906	ZBTB16	PLZF|ZNF145	zinc finger and BTB domain containing 16	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr11-959	chr11	116002025	116003288	+	21.1	1263	Intergenic	Intergenic	-371738	NR_034148	283143	Hs.130499	NR_034148		LINC00900	-	long intergenic non-protein coding RNA 900	ncRNA	21.12	4.37	4.832951945	6.64E-07
chr11-960	chr11	116298635	116299635	+	18.6	1000	Intergenic	Intergenic	-211004	NR_135069	101929011	Hs.733911	NR_135069	ENSG00000237937	LOC101929011	-	uncharacterized LOC101929011	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr11-968	chr11	117445299	117446299	+	18.6	1000	"intron (NM_020693, intron 3 of 32)"	AluSq2|SINE|Alu	222177	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr11-969	chr11	117481783	117482783	+	17.9	1000	"intron (NM_020693, intron 3 of 32)"	"intron (NM_020693, intron 3 of 32)"	185693	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr11-970	chr11	117498055	117499509	+	25	1454	"intron (NM_020693, intron 3 of 32)"	MIRc|SINE|MIR	169194	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr11-971	chr11	117501531	117502808	+	17.9	1277	"intron (NM_020693, intron 3 of 32)"	"intron (NM_020693, intron 3 of 32)"	165807	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr11-972	chr11	117539725	117541281	+	27.5	1556	"intron (NM_020693, intron 3 of 32)"	L2b|LINE|L2	127473	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	27.52	5.34	5.153558052	3.94E-09
chr11-975	chr11	117636824	117638360	+	26.9	1536	"intron (NM_020693, intron 3 of 32)"	"intron (NM_020693, intron 3 of 32)"	30384	NM_020693	57453	Hs.659513	NM_020693	ENSG00000177103	DSCAML1	DSCAM2	DS cell adhesion molecule like 1	protein-coding	26.88	5.82	4.618556701	1.71E-08
chr11-981	chr11	117941480	117945798	+	60.8	4318	"intron (NR_038318, intron 1 of 3)"	"intron (NR_038318, intron 1 of 3)"	-4088	NM_019894	56649	Hs.161985	NM_019894	ENSG00000137648	TMPRSS4	CAPH2|MT-SP2|TMPRSS3	"transmembrane protease, serine 4"	protein-coding	60.81	8.74	6.957665904	7.80E-24
chr11-989	chr11	119859197	119860724	+	28.8	1527	Intergenic	Intergenic	139661	NM_001330382	23650	Hs.504115	NM_012101	ENSG00000137699	TRIM29	ATDC	tripartite motif containing 29	protein-coding	28.8	5.82	4.948453608	3.50E-09
chr11-992	chr11	120041577	120042829	+	22.4	1252	Intergenic	AluJr|SINE|Alu	-33340	NM_012101	23650	Hs.504115	NM_012101	ENSG00000137699	TRIM29	ATDC	tripartite motif containing 29	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr12-10	chr12	57634768	57636294	+	36.5	1526	Intergenic	CpG	-1056	NM_020142	56901	Hs.75069	NM_020142	ENSG00000185633	NDUFA4L2	NUOMS	"NDUFA4, mitochondrial complex associated like 2"	protein-coding	36.48	1.94	18.80412371	8.81E-26
chr12-1003	chr12	117792835	117793835	+	17.9	1000	"intron (NM_001204218, intron 1 of 29)"	"intron (NM_001204218, intron 1 of 29)"	6272	NM_000620	4842	Hs.654410	NM_000620	ENSG00000089250	NOS1	IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS	nitric oxide synthase 1	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr12-1007	chr12	119930928	119931928	+	16	1000	"intron (NM_178499, intron 5 of 13)"	"intron (NM_178499, intron 5 of 13)"	-99836	NM_001136534	387890	Hs.530965	NM_001136534	ENSG00000224982	TMEM233	DSPB2|IFITMD2	transmembrane protein 233	protein-coding	16	0.97	16.49484536	3.54E-11
chr12-1011	chr12	124600009	124601009	+	17.9	1000	"intron (NM_001204299, intron 2 of 4)"	"intron (NM_001204299, intron 2 of 4)"	142747	NM_152437	144348	Hs.524828	NM_152437	ENSG00000179195	ZNF664	ZFOC1|ZNF176	zinc finger protein 664	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr12-1012	chr12	124740251	124741251	+	17.3	1000	"intron (NM_001204299, intron 3 of 4)"	AluJb|SINE|Alu	-32959	NM_181709	144347	Hs.432901	NM_181709	ENSG00000178882	RFLNA	CFM2|FAM101A	refilin A	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr12-1015	chr12	125827416	125828748	+	19.2	1332	"intron (NM_052907, intron 1 of 8)"	MIRb|SINE|MIR	16920	NM_052907	114795	Hs.524838	NM_052907	ENSG00000139364	TMEM132B	-	transmembrane protein 132B	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr12-1019	chr12	128971310	128972310	+	17.3	1000	"intron (NM_001136103, intron 2 of 8)"	"intron (NM_001136103, intron 2 of 8)"	193173	NR_037406	100500817		NR_037406	ENSG00000265635	MIR3612	-	microRNA 3612	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr12-102	chr12	132964798	132966157	+	25.6	1359	Intergenic	Intergenic	59041	NR_120467	101928416		NR_120467	ENSG00000255916	LOC101928416	-	uncharacterized LOC101928416	ncRNA	25.6	1.94	13.19587629	4.03E-16
chr12-1020	chr12	129599565	129600565	+	17.3	1000	"intron (NM_133448, intron 5 of 8)"	"intron (NM_133448, intron 5 of 8)"	5830	NR_104172	283352	Hs.665667	NR_104172	ENSG00000249196	LOC283352	-	uncharacterized LOC283352	ncRNA	17.28	0.97	17.81443299	2.06E-12
chr12-1021	chr12	130449245	130450832	+	25	1587	Intergenic	MLT1E1|LTR|ERVL-MaLR	-61826	NM_133448	121256	Hs.507268	NM_133448	ENSG00000151952	TMEM132D	MOLT|PPP1R153	transmembrane protein 132D	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr12-1022	chr12	130959629	130961324	+	26.9	1695	"intron (NM_015347, intron 3 of 18)"	L2|LINE|L2	41934	NM_015347	23504	Hs.657441	NM_015347	ENSG00000060709	RIMBP2	PPP1R133|RBP2|RIM-BP2	RIMS binding protein 2	protein-coding	26.88	3.4	7.905882353	1.25E-12
chr12-1024	chr12	132049544	132050815	+	20.5	1271	Intergenic	Intergenic	-145453	NM_004592	6433	Hs.308171	NM_004592	ENSG00000061936	SFSWAP	SFRS8|SWAP	splicing factor SWAP homolog	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr12-1025	chr12	132924889	132926174	+	18.6	1285	Intergenic	Intergenic	19095	NR_120467	101928416		NR_120467	ENSG00000255916	LOC101928416	-	uncharacterized LOC101928416	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr12-1031	chr12	1940208	1941208	+	16	1000	"intron (NM_001039029, intron 4 of 4)"	"intron (NM_001039029, intron 4 of 4)"	11275	NM_001039029	654429	Hs.585579	NM_001039029	ENSG00000166159	LRTM2	-	leucine rich repeats and transmembrane domains 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr12-1035	chr12	2167765	2170055	+	34.6	2290	"intron (NM_001129830, intron 1 of 47)"	MIR3|SINE|MIR	6459	NM_199460	775	Hs.118262	NM_000719	ENSG00000151067	CACNA1C	CACH2|CACN2|CACNL1A1|CCHL1A1|CaV1.2|LQT8|TS	calcium voltage-gated channel subunit alpha1 C	protein-coding	34.56	5.82	5.93814433	6.75E-13
chr12-1037	chr12	2253316	2254316	+	17.3	1000	"intron (NM_001129830, intron 3 of 47)"	"intron (NM_001129830, intron 3 of 47)"	78831	NR_046578	100874234	Hs.372570	NR_046578	ENSG00000256025	CACNA1C-AS4	-	CACNA1C antisense RNA 4	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr12-1038	chr12	2269860	2271115	+	19.2	1255	"intron (NM_001129830, intron 3 of 47)"	"intron (NM_001129830, intron 3 of 47)"	62160	NR_046578	100874234	Hs.372570	NR_046578	ENSG00000256025	CACNA1C-AS4	-	CACNA1C antisense RNA 4	ncRNA	19.2	3.4	5.647058824	1.47E-07
chr12-104	chr12	4973664	4974942	+	25	1278	Intergenic	Intergenic	-44770	NM_000217	3736	Hs.416139	NM_000217	ENSG00000111262	KCNA1	AEMK|EA1|HBK1|HUK1|KV1.1|MBK1|MK1|RBK1	potassium voltage-gated channel subfamily A member 1	protein-coding	24.96	4.37	5.711670481	4.38E-09
chr12-1041	chr12	2379059	2381057	+	33.9	1998	"intron (NR_046769, intron 1 of 2)"	"intron (NR_046769, intron 1 of 2)"	1116	NR_046769	100874370	Hs.653548	NR_046769		CACNA1C-IT3	-	CACNA1C intronic transcript 3	ncRNA	33.92	4.85	6.993814433	7.28E-14
chr12-1047	chr12	3360922	3362613	+	26.2	1691	"intron (NM_006675, intron 3 of 8)"	"intron (NM_006675, intron 3 of 8)"	-128748	NM_001256536	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	26.24	2.91	9.017182131	6.53E-13
chr12-1051	chr12	3441402	3442402	+	17.3	1000	Intergenic	MLT1A|LTR|ERVL-MaLR	-48613	NM_001256536	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr12-1052	chr12	3491096	3492096	+	16	1000	"intron (NM_001256536, intron 1 of 9)"	L1MD1|LINE|L1	1081	NM_001256536	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	16	3.88	4.12371134	7.91E-05
chr12-1053	chr12	3583903	3587024	+	41	3121	"intron (NM_001256536, intron 1 of 9)"	L3b|LINE|CR1	-14901	NM_019854	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	40.97	7.77	5.272844273	1.22E-13
chr12-1054	chr12	3598035	3599035	+	16.6	1000	"non-coding (NR_126055, exon 2 of 2)"	"non-coding (NR_126055, exon 2 of 2)"	-1829	NM_019854	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr12-1056	chr12	4013023	4014854	+	33.9	1831	Intergenic	L1MEd|LINE|L1	-31324	NM_001286521	57097	Hs.657268	NM_020367	ENSG00000111224	PARP11	ARTD11|C12orf6|MIB006	poly(ADP-ribose) polymerase family member 11	protein-coding	33.92	6.31	5.375594295	2.25E-11
chr12-1063	chr12	4372164	4385907	+	221.5	13743	"intron (NR_125790, intron 1 of 1)"	CpG	-3867	NM_001759	894	Hs.376071	NM_001759	ENSG00000118971	CCND2	KIAK0002|MPPH3	cyclin D2	protein-coding	221.47	33.49	6.613018812	2.50E-80
chr12-1068	chr12	5677077	5678658	+	24.3	1581	"intron (NM_001278596, intron 24 of 25)"	"intron (NM_001278596, intron 24 of 25)"	74569	NM_002527	4908	Hs.99171	NM_002527	ENSG00000185652	NTF3	HDNF|NGF-2|NGF2|NT-3|NT3	neurotrophin 3	protein-coding	24.32	4.37	5.565217391	4.38E-09
chr12-1070	chr12	5942815	5943815	+	16.6	1000	"intron (NM_001278596, intron 4 of 25)"	MLT1H1|LTR|ERVL-MaLR	111110	NM_001278596	57101	Hs.148970	NM_020373	ENSG00000047617	ANO2	C12orf3|TMEM16B	anoctamin 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr12-1075	chr12	6358927	6360213	+	20.5	1286	Intergenic	Intergenic	50088	NM_001769	928	Hs.114286	NM_001769	ENSG00000010278	CD9	BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29	CD9 molecule	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr12-1079	chr12	7384510	7385510	+	16.6	1000	Intergenic	L1MC5|LINE|L1	42052	NM_000319	5830	Hs.567327	NM_000319	ENSG00000139197	PEX5	PBD2A|PBD2B|PTS1-BP|PTS1R|PXR1|RCDP5	peroxisomal biogenesis factor 5	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr12-1081	chr12	12230494	12231494	+	17.3	1000	"intron (NM_030766, intron 1 of 5)"	"intron (NM_030766, intron 1 of 5)"	6592	NM_138722	79370	Hs.210343	NM_030766	ENSG00000121380	BCL2L14	BCLG	BCL2 like 14	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr12-1082	chr12	12339686	12341095	+	16.6	1409	"intron (NM_002336, intron 3 of 22)"	"intron (NM_002336, intron 3 of 22)"	75504	NR_036263	100422872		NR_036263	ENSG00000283429	MIR1244-3	-	microRNA 1244-3	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr12-1084	chr12	13054930	13055930	+	16.6	1000	"intron (NM_003979, intron 1 of 3)"	AluJr|SINE|Alu	11474	NM_003979	9052	Hs.631733	NM_003979	ENSG00000013588	GPRC5A	GPCR5A|PEIG-1|RAI3|RAIG1|TIG1	G protein-coupled receptor class C group 5 member A	protein-coding	16.64	0	17.14115603	3.68E-16
chr12-1086	chr12	13248184	13249184	+	17.3	1000	promoter-TSS (NM_001206843)	promoter-TSS (NM_001206843)	56	NM_031289	83445	Hs.240053	NM_031289	ENSG00000111305	GSG1	-	germ cell associated 1	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr12-1087	chr12	13355128	13356128	+	17.3	1000	"intron (NM_001423, intron 1 of 4)"	"intron (NM_001423, intron 1 of 4)"	6026	NM_001423	2012	Hs.719042	NM_001423	ENSG00000134531	EMP1	CL-20|EMP-1|TMP	epithelial membrane protein 1	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr12-1091	chr12	20520228	20523713	+	57	3485	promoter-TSS (NM_000921)	promoter-TSS (NM_000921)	-209	NM_000921	5139	Hs.386791	NM_000921	ENSG00000172572	PDE3A	CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB	phosphodiesterase 3A	protein-coding	56.97	9.71	5.867147271	1.19E-19
chr12-1095	chr12	30437094	30438620	+	25.6	1526	Intergenic	AluJr|SINE|Alu	392321	NM_001190995	10526	Hs.505136	NM_006390	ENSG00000133704	IPO8	RANBP8	importin 8	protein-coding	25.6	4.85	5.278350515	4.26E-09
chr12-1097	chr12	30986241	30987507	+	20.5	1266	Intergenic	LTR1B|LTR|ERV1	38259	NR_040245	100287314	Hs.355210	NR_040245	ENSG00000235884	LINC00941	-	long intergenic non-protein coding RNA 941	ncRNA	20.48	2.43	8.427983539	2.25E-10
chr12-110	chr12	49371627	49376197	+	104.3	4570	"intron (NM_005430, intron 2 of 3)"	CpG-5285	1676	NM_005430	7471	Hs.248164	NM_005430	ENSG00000125084	WNT1	BMND16|INT1|OI15	Wnt family member 1	protein-coding	104.33	19.9	5.242713568	1.25E-31
chr12-1102	chr12	42875646	42877972	+	44.2	2326	"intron (NM_153026, intron 1 of 7)"	CpG	607	NM_001144881	144165	Hs.524348	NM_153026	ENSG00000139174	PRICKLE1	EPM1B|RILP	prickle planar cell polarity protein 1	protein-coding	44.17	3.4	12.99117647	6.68E-26
chr12-1103	chr12	47237114	47238114	+	16.6	1000	Intergenic	Intergenic	-17834	NM_018018	55089	Hs.446077	NM_018018	ENSG00000139209	SLC38A4	ATA3|NAT3|PAAT|SNAT4	solute carrier family 38 member 4	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr12-1104	chr12	48138381	48139381	+	17.3	1000	"intron (NM_001098531, intron 16 of 27)"	"intron (NM_001098531, intron 16 of 27)"	13300	NM_001098532	10411	Hs.8578	NM_006105	ENSG00000079337	RAPGEF3	CAMP-GEFI|EPAC|EPAC1|HSU79275|bcm910	Rap guanine nucleotide exchange factor 3	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr12-1106	chr12	48322279	48328982	+	91.5	6703	Intergenic	AluSz6|SINE|Alu	-26816	NM_000376	7421	Hs.524368	NM_000376	ENSG00000111424	VDR	NR1I1|PPP1R163	"vitamin D (1,25- dihydroxyvitamin D3) receptor"	protein-coding	91.53	19.42	4.713182286	2.68E-25
chr12-1107	chr12	48369421	48370421	+	16	1000	"intron (NM_033150, intron 48 of 52)"	"intron (NM_033150, intron 48 of 52)"	12591	NM_024056	79022	Hs.596726	NM_024056	ENSG00000134291	TMEM106C	-	transmembrane protein 106C	protein-coding	16	0	16.4818808	1.26E-14
chr12-1108	chr12	48374632	48376277	+	28.8	1645	"intron (NM_033150, intron 35 of 52)"	"intron (NM_033150, intron 35 of 52)"	18124	NM_024056	79022	Hs.596726	NM_024056	ENSG00000134291	TMEM106C	-	transmembrane protein 106C	protein-coding	28.8	5.82	4.948453608	3.50E-09
chr12-1109	chr12	48390248	48391248	+	16	1000	"intron (NM_033150, intron 6 of 52)"	"intron (NM_033150, intron 6 of 52)"	7537	NM_001844	1280	Hs.408182	NM_001844	ENSG00000139219	COL2A1	ANFH|AOM|COL11A3|SEDC|STL1	collagen type II alpha 1 chain	protein-coding	16	2.91	5.498281787	4.98E-06
chr12-1111	chr12	48415317	48416317	+	16.6	1000	Intergenic	Intergenic	-17532	NM_033150	1280	Hs.408182	NM_001844	ENSG00000139219	COL2A1	ANFH|AOM|COL11A3|SEDC|STL1	collagen type II alpha 1 chain	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr12-1113	chr12	49276306	49278064	+	27.5	1758	Intergenic	Intergenic	-17532	NM_014470	27289	Hs.124940	NM_014470	ENSG00000172602	RND1	ARHS|RHO6|RHOS	Rho family GTPase 1	protein-coding	27.52	2.91	9.457044674	7.03E-14
chr12-1119	chr12	52598410	52599410	+	16.6	1000	TTS (NM_001242696)	TTS (NM_001242696)	5729	NM_001242696	283403	Hs.667179	NM_001242696		C12orf80	-	chromosome 12 open reading frame 80	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr12-1121	chr12	52713715	52714715	+	17.3	1000	"intron (NM_002282, intron 1 of 8)"	L2b|LINE|L2	967	NM_002282	3889	Hs.720768	NM_002282	ENSG00000170523	KRT83	HB3|Hb-3|KRTHB3	keratin 83	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr12-1125	chr12	52882572	52883854	+	17.9	1282	"intron (NM_005554, intron 6 of 8)"	AluSx3|SINE|Alu	3968	NM_005554	3853	Hs.700779	NM_005554	ENSG00000205420	KRT6A	CK-6C|CK-6E|CK6A|CK6C|CK6D|K6A|K6C|K6D|KRT6C|KRT6D|PC3	keratin 6A	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr12-1127	chr12	53729373	53731723	+	44.2	2350	promoter-TSS (NM_001173467)	promoter-TSS (NM_001173467)	-381	NM_001173467	121340	Hs.209402	NM_152860	ENSG00000170374	SP7	OI11|OI12|OSX|osterix	Sp7 transcription factor	protein-coding	44.17	5.82	7.589347079	9.68E-19
chr12-1133	chr12	54254483	54255483	+	16.6	1000	Intergenic	Intergenic	-77593	NM_017410	3229	Hs.118608	NM_017410	ENSG00000123364	HOXC13	ECTD9|HOX3|HOX3G	homeobox C13	protein-coding	16.64	0	17.14115603	3.68E-16
chr12-1134	chr12	54314813	54315813	+	16.6	1000	Intergenic	L1PA8|LINE|L1	-17263	NM_017410	3229	Hs.118608	NM_017410	ENSG00000123364	HOXC13	ECTD9|HOX3|HOX3G	homeobox C13	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr12-1135	chr12	54321658	54324833	+	48	3175	Intergenic	Intergenic	-9331	NM_017410	3229	Hs.118608	NM_017410	ENSG00000123364	HOXC13	ECTD9|HOX3|HOX3G	homeobox C13	protein-coding	48.01	11.65	4.121030043	3.24E-12
chr12-114	chr12	54376234	54377503	+	29.4	1269	TTS (NR_047506)	TTS (NR_047506)	-2078	NM_017409	3226	Hs.44276	NM_017409	ENSG00000180818	HOXC10	HOX3I	homeobox C10	protein-coding	29.44	4.37	6.736842105	2.70E-12
chr12-1153	chr12	54530302	54533841	+	53.8	3539	Intergenic	Intergenic	12216	NR_026656	400043	Hs.19193	NR_026656	ENSG00000250742	LOC400043	-	uncharacterized LOC400043	ncRNA	53.77	6.8	7.907352941	1.13E-23
chr12-1159	chr12	55010578	55011578	+	15.4	1000	Intergenic	LTR78B|LTR|ERV1	-6832	NR_003039	644076	Hs.483519	NR_003039	ENSG00000257780	GLYCAM1	-	glycosylation dependent cell adhesion molecule 1 (pseudogene)	pseudo	15.36	3.4	4.517647059	2.25E-05
chr12-1162	chr12	55081391	55082391	+	16.6	1000	Intergenic	L2|LINE|L2	-39614	NM_053283	117159	Hs.350570	NM_053283	ENSG00000161634	DCD	AIDD|DCD-1|DSEP|HCAP|PIF	dermcidin	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr12-1163	chr12	56000387	56001387	+	17.3	1000	Intergenic	Intergenic	-29789	NM_206899	121130	Hs.554551	NM_206899	ENSG00000175398	OR10P1	OR10P1P|OR10P2P|OR10P3P|OR12-7|OST701	olfactory receptor family 10 subfamily P member 1	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr12-1165	chr12	56472514	56475774	+	57.6	3260	"exon (NM_001982, exon 1 of 28)"	"exon (NM_001982, exon 1 of 28)"	252	NM_001005915	2065	Hs.118681	NM_001982	ENSG00000065361	ERBB3	ErbB-3|HER3|LCCS2|MDA-BF-1|c-erbB-3|c-erbB3|erbB3-S|p180-ErbB3|p45-sErbB3|p85-sErbB3	erb-b2 receptor tyrosine kinase 3	protein-coding	57.61	7.77	7.414414414	3.81E-24
chr12-1178	chr12	58243081	58247414	+	68.5	4333	Intergenic	MIRb|SINE|MIR	-4500	NM_005730	10106	Hs.524530	NM_005730	ENSG00000175215	CTDSP2	OS4|PSR2|SCP2	CTD small phosphatase 2	protein-coding	68.49	16.5	4.150909091	5.42E-17
chr12-1184	chr12	58594858	58595858	+	16.6	1000	Intergenic	Intergenic	113683	NR_135022	105369785	Hs.539353	NR_135022	ENSG00000257541	LOC105369785	-	uncharacterized LOC105369785	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr12-1185	chr12	64062152	64063152	+	17.3	1000	promoter-TSS (NM_173812)	promoter-TSS (NM_173812)	-298	NM_173812	283417	Hs.533644	NM_173812	ENSG00000177990	DPY19L2	SPATA34|SPGF9	dpy-19 like 2	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr12-1187	chr12	64661409	64662409	+	16.6	1000	"intron (NM_001170633, intron 12 of 12)"	MER5B|DNA|hAT-Charlie	-45833	NM_001300941	144577	Hs.444671	NM_152440	ENSG00000174206	C12orf66	-	chromosome 12 open reading frame 66	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr12-1189	chr12	65674024	65675829	+	26.9	1805	"intron (NM_001193461, intron 1 of 6)"	AluJb|SINE|Alu	2159	NM_001193461	253827	Hs.339024	NM_198080	ENSG00000174099	MSRB3	DFNB74	methionine sulfoxide reductase B3	protein-coding	26.88	2.91	9.237113402	7.03E-14
chr12-1195	chr12	68087250	68088505	+	16.6	1255	Intergenic	MLT1K|LTR|ERVL-MaLR	35378	NR_110063	101927901	Hs.369609	NR_110063	ENSG00000255970	LOC101927901	-	uncharacterized LOC101927901	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr12-1199	chr12	77272049	77273049	+	16.6	1000	"intron (NM_001300965, intron 1 of 5)"	"intron (NM_001300965, intron 1 of 5)"	271	NM_001321	1466	Hs.530904	NM_001321	ENSG00000175183	CSRP2	CRP2|LMO5|SmLIM	cysteine and glycine rich protein 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr12-1200	chr12	81107338	81110286	+	48.6	2948	Intergenic	Intergenic	-1896	NM_005593	4617	Hs.178023	NM_005593	ENSG00000111049	MYF5	bHLHc2	myogenic factor 5	protein-coding	48.65	6.31	7.709984152	3.34E-21
chr12-1205	chr12	99170558	99171558	+	17.3	1000	"intron (NM_001204081, intron 7 of 9)"	"intron (NM_001204081, intron 7 of 9)"	117616	NM_001204079	56899	Hs.506458	NM_020140	ENSG00000185046	ANKS1B	AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr12-1209	chr12	105836271	105837271	+	16	1000	Intergenic	MER110-int|LTR|ERV1	112357	NM_001145199	387882	Hs.368938	NM_207376	ENSG00000235162	C12orf75	AGD3|OCC-1|OCC1	chromosome 12 open reading frame 75	protein-coding	16	1.46	10.95890411	3.44E-09
chr12-1212	chr12	106515247	106516560	+	21.8	1313	"intron (NM_014840, intron 1 of 6)"	"intron (NM_014840, intron 1 of 6)"	17908	NM_014840	9891	Hs.524692	NM_014840	ENSG00000074590	NUAK1	ARK5	NUAK family kinase 1	protein-coding	21.76	0.97	22.43298969	1.19E-17
chr12-1213	chr12	106530033	106534721	+	87.1	4688	"exon (NM_014840, exon 1 of 7)"	"exon (NM_014840, exon 1 of 7)"	1434	NM_014840	9891	Hs.524692	NM_014840	ENSG00000074590	NUAK1	ARK5	NUAK family kinase 1	protein-coding	87.05	6.8	12.80147059	4.28E-50
chr12-1216	chr12	106638852	106642668	+	64	3816	"intron (NM_006825, intron 1 of 1)"	"intron (NM_006825, intron 1 of 1)"	953	NM_006825	10970	Hs.74368	NM_006825	ENSG00000136026	CKAP4	CLIMP-63|ERGIC-63|p63	cytoskeleton associated protein 4	protein-coding	64.01	6.8	9.413235294	3.21E-31
chr12-1217	chr12	106644755	106647691	+	44.2	2936	Intergenic	AluSx|SINE|Alu	-4510	NM_006825	10970	Hs.74368	NM_006825	ENSG00000136026	CKAP4	CLIMP-63|ERGIC-63|p63	cytoskeleton associated protein 4	protein-coding	44.17	5.82	7.589347079	9.68E-19
chr12-1218	chr12	106665885	106667180	+	20.5	1295	Intergenic	AluJb|SINE|Alu	-24819	NM_006825	10970	Hs.74368	NM_006825	ENSG00000136026	CKAP4	CLIMP-63|ERGIC-63|p63	cytoskeleton associated protein 4	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr12-1220	chr12	106981924	106982924	+	16.6	1000	"intron (NM_213594, intron 1 of 17)"	MADE1|DNA|TcMar-Mariner	5739	NM_213594	5992	Hs.388827	NM_002920	ENSG00000111783	RFX4	NYD-SP10	regulatory factor X4	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr12-1223	chr12	108319702	108320702	+	16	1000	Intergenic	Intergenic	-22654	NR_037629	728739	Hs.741995	NR_037629		LOC728739	-	programmed cell death 2 pseudogene	pseudo	16	0.97	16.49484536	3.54E-11
chr12-1229	chr12	110523556	110524556	+	17.3	1000	Intergenic	L2|LINE|L2	-18556	NM_207435	400073	Hs.44817	NM_207435	ENSG00000174456	C12orf76	-	chromosome 12 open reading frame 76	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr12-1232	chr12	111424210	111425210	+	17.3	1000	Intergenic	Intergenic	-29088	NR_135001	105369980	Hs.564357	NR_135001	ENSG00000258240	LOC105369980	-	uncharacterized LOC105369980	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr12-1239	chr12	113954373	113955373	+	16	1000	Intergenic	L1MC4|LINE|L1	-44996	NM_022363	64211	Hs.302029	NM_022363	ENSG00000089116	LHX5	-	LIM homeobox 5	protein-coding	16	3.88	4.12371134	7.91E-05
chr12-1242	chr12	114847614	114851697	+	54.4	4083	"non-coding (NR_038440, exon 3 of 3)"	"non-coding (NR_038440, exon 3 of 3)"	-3408	NM_000192	6910	Hs.381715	NM_000192	ENSG00000089225	TBX5	HOS	T-box 5	protein-coding	54.41	7.77	7.002574003	1.47E-21
chr12-125	chr12	124778666	124782749	+	64.6	4083	"intron (NM_181709, intron 1 of 2)"	T-rich|Low_complexity|Low_complexity	6997	NM_181709	144347	Hs.432901	NM_181709	ENSG00000178882	RFLNA	CFM2|FAM101A	refilin A	protein-coding	64.65	8.74	7.397025172	2.09E-26
chr12-1251	chr12	119617317	119618317	+	17.3	1000	"intron (NM_014365, intron 1 of 2)"	LTR50|LTR|ERVL	1222	NM_014365	26353	Hs.400095	NM_014365	ENSG00000152137	HSPB8	CMT2L|DHMN2|E2IG1|H11|HMN2|HMN2A|HSP22	heat shock protein family B (small) member 8	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr12-1252	chr12	120045574	120047153	+	27.5	1579	"intron (NM_001136534, intron 1 of 2)"	"intron (NM_001136534, intron 1 of 2)"	15099	NM_001136534	387890	Hs.530965	NM_001136534	ENSG00000224982	TMEM233	DSPB2|IFITMD2	transmembrane protein 233	protein-coding	27.52	1.94	14.18556701	2.90E-17
chr12-126	chr12	1644533	1645533	+	23.7	1000	Intergenic	Intergenic	35376	NR_028415	100292680	Hs.391695	NR_028415		LINC00942	-	long intergenic non-protein coding RNA 942	ncRNA	23.68	2.91	8.137457045	4.85E-11
chr12-1260	chr12	126067442	126068442	+	16	1000	"intron (NM_052907, intron 4 of 8)"	"intron (NM_052907, intron 4 of 8)"	-39056	NM_001286219	114795	Hs.524838	NM_052907	ENSG00000139364	TMEM132B	-	transmembrane protein 132B	protein-coding	16	1.94	8.24742268	7.67E-08
chr12-1262	chr12	129226266	129227266	+	16	1000	Intergenic	MLT1B|LTR|ERVL-MaLR	81775	NM_145648	121260	Hs.507260	NM_145648	ENSG00000139370	SLC15A4	FP12591|PHT1|PTR4	solute carrier family 15 member 4	protein-coding	16	1.94	8.24742268	7.67E-08
chr12-1263	chr12	130296186	130297878	+	26.2	1692	"intron (NM_133448, intron 1 of 8)"	L2|LINE|L2	91180	NM_133448	121256	Hs.507268	NM_133448	ENSG00000151952	TMEM132D	MOLT|PPP1R153	transmembrane protein 132D	protein-coding	26.24	4.85	5.410309278	4.26E-09
chr12-1265	chr12	130625795	130628678	+	34.6	2883	Intergenic	Intergenic	18987	NR_033834	440119	Hs.288262	NR_033834	ENSG00000250208	FZD10-AS1	-	FZD10 antisense RNA 1 (head to head)	ncRNA	34.56	7.77	4.447876448	3.74E-10
chr12-1267	chr12	131178194	131179194	+	16.6	1000	Intergenic	Intergenic	145125	NM_194356	2054	Hs.437585	NM_001980	ENSG00000111450	STX2	EPIM|EPM|STX2A|STX2B|STX2C	syntaxin 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr12-1268	chr12	131410579	131411579	+	17.3	1000	Intergenic	Intergenic	-27373	NM_198827	283383	Hs.719239	NM_198827	ENSG00000111452	ADGRD1	GPR133|PGR25	adhesion G protein-coupled receptor D1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr12-1269	chr12	131450827	131451827	+	14.7	1000	"intron (NM_198827, intron 3 of 24)"	"intron (NM_198827, intron 3 of 24)"	12875	NM_001330497	283383	Hs.719239	NM_198827	ENSG00000111452	ADGRD1	GPR133|PGR25	adhesion G protein-coupled receptor D1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr12-1278	chr12	132973601	132975197	+	30.1	1596	Intergenic	Intergenic	67963	NR_120467	101928416		NR_120467	ENSG00000255916	LOC101928416	-	uncharacterized LOC101928416	ncRNA	30.08	1.94	15.50515464	1.31E-19
chr12-1282	chr12	299968	300968	+	15.4	1000	"intron (NM_001122848, intron 15 of 15)"	"intron (NM_001122848, intron 15 of 15)"	-12343	NR_120475	101929384	Hs.569138	NR_120475	ENSG00000256577	LOC101929384	-	uncharacterized LOC101929384	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr12-1295	chr12	1993499	1994499	+	15.4	1000	"exon (NM_172364, exon 11 of 38)"	"exon (NM_172364, exon 11 of 38)"	33871	NM_172364	93589	Hs.13768	NM_172364	ENSG00000151062	CACNA2D4	RCD4	calcium voltage-gated channel auxiliary subunit alpha2delta 4	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr12-1296	chr12	2123198	2124198	+	16	1000	Intergenic	L2b|LINE|L2	-9997	NR_135060	196513	Hs.130934	NM_152640	ENSG00000151065	DCP1B	DCP1	decapping mRNA 1B	protein-coding	16	1.46	10.95890411	3.44E-09
chr12-1297	chr12	2139604	2143972	+	76.2	4368	Intergenic	Intergenic	-15730	NR_046768	100874369	Hs.208723	NR_046768	ENSG00000256257	CACNA1C-IT2	-	CACNA1C intronic transcript 2	ncRNA	76.17	6.8	11.20147059	2.32E-40
chr12-13	chr12	53358879	53359879	+	30.7	1000	Intergenic	CpG	-15729	NM_001256293	3856	Hs.533782	NM_002273	ENSG00000170421	KRT8	CARD2|CK-8|CK8|CYK8|K2C8|K8|KO	keratin 8	protein-coding	30.72	2.91	10.55670103	6.73E-17
chr12-1301	chr12	2286890	2289823	+	38.4	2933	"intron (NM_001129830, intron 3 of 47)"	"intron (NM_001129830, intron 3 of 47)"	44291	NR_046578	100874234	Hs.372570	NR_046578	ENSG00000256025	CACNA1C-AS4	-	CACNA1C antisense RNA 4	ncRNA	38.4	4.37	8.787185355	1.37E-18
chr12-1304	chr12	2323332	2324332	+	16	1000	"intron (NM_001129830, intron 3 of 47)"	"intron (NM_001129830, intron 3 of 47)"	8815	NR_046578	100874234	Hs.372570	NR_046578	ENSG00000256025	CACNA1C-AS4	-	CACNA1C antisense RNA 4	ncRNA	16	3.4	4.705882353	2.25E-05
chr12-1306	chr12	2487473	2488473	+	16	1000	"intron (NM_001129830, intron 3 of 47)"	CT-rich|Low_complexity|Low_complexity	109031	NR_046769	100874370	Hs.653548	NR_046769		CACNA1C-IT3	-	CACNA1C intronic transcript 3	ncRNA	16	1.94	8.24742268	7.67E-08
chr12-1307	chr12	2536310	2537310	+	15.4	1000	"intron (NM_001129830, intron 3 of 47)"	AluSq2|SINE|Alu	157868	NR_046769	100874370	Hs.653548	NR_046769		CACNA1C-IT3	-	CACNA1C intronic transcript 3	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr12-1309	chr12	2661560	2662899	+	23	1339	"intron (NM_001129830, intron 10 of 47)"	"intron (NM_001129830, intron 10 of 47)"	119157	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA	23.04	4.37	5.272311213	2.46E-08
chr12-1310	chr12	2675073	2677952	+	42.9	2879	"intron (NM_001129830, intron 12 of 47)"	MIR|SINE|MIR	104874	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA	42.89	6.8	6.307352941	5.66E-16
chr12-1315	chr12	2738483	2739483	+	16	1000	"intron (NM_001129830, intron 29 of 47)"	"intron (NM_001129830, intron 29 of 47)"	42403	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA	16	1.94	8.24742268	7.67E-08
chr12-1319	chr12	3097157	3098157	+	16.6	1000	"intron (NM_201443, intron 1 of 10)"	AluSq|SINE|Alu	28909	NM_201443	7004	Hs.94865	NM_003213	ENSG00000197905	TEAD4	EFTR-2|RTEF1|TCF13L1|TEF-3|TEF3|TEFR-1|hRTEF-1B	TEA domain transcription factor 4	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr12-1320	chr12	3103024	3104024	+	16	1000	"intron (NM_201443, intron 1 of 10)"	AluSx1|SINE|Alu	34776	NM_201443	7004	Hs.94865	NM_003213	ENSG00000197905	TEAD4	EFTR-2|RTEF1|TCF13L1|TEF-3|TEF3|TEFR-1|hRTEF-1B	TEA domain transcription factor 4	protein-coding	16	3.4	4.705882353	2.25E-05
chr12-1323	chr12	3212002	3213002	+	16.6	1000	"intron (NM_006675, intron 2 of 8)"	"intron (NM_006675, intron 2 of 8)"	25981	NM_006675	10867	Hs.504517	NM_006675	ENSG00000011105	TSPAN9	NET-5|NET5|PP1057	tetraspanin 9	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr12-1324	chr12	3245074	3249369	+	62.7	4295	"intron (NM_006675, intron 2 of 8)"	MIR3|SINE|MIR	60700	NM_006675	10867	Hs.504517	NM_006675	ENSG00000011105	TSPAN9	NET-5|NET5|PP1057	tetraspanin 9	protein-coding	62.73	12.62	4.970681458	5.31E-19
chr12-1327	chr12	3299031	3300031	+	15.4	1000	"intron (NM_006675, intron 2 of 8)"	"intron (NM_006675, intron 2 of 8)"	113010	NM_006675	10867	Hs.504517	NM_006675	ENSG00000011105	TSPAN9	NET-5|NET5|PP1057	tetraspanin 9	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr12-1328	chr12	3348689	3349689	+	16	1000	"intron (NM_006675, intron 3 of 8)"	"intron (NM_006675, intron 3 of 8)"	-141326	NM_001256536	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	16	0	16.4818808	1.26E-14
chr12-1331	chr12	3392820	3396224	+	48.6	3404	"3' UTR (NM_001168320, exon 8 of 8)"	"3' UTR (NM_001168320, exon 8 of 8)"	-95993	NM_001256536	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	48.65	6.8	7.154411765	3.87E-20
chr12-134	chr12	6350572	6351827	+	26.9	1255	Intergenic	Intergenic	41717	NM_001769	928	Hs.114286	NM_001769	ENSG00000010278	CD9	BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29	CD9 molecule	protein-coding	26.88	4.37	6.151029748	1.19E-10
chr12-1343	chr12	4359309	4360674	+	19.2	1365	"intron (NR_125790, intron 1 of 1)"	"intron (NR_125790, intron 1 of 1)"	-22911	NM_001759	894	Hs.376071	NM_001759	ENSG00000118971	CCND2	KIAK0002|MPPH3	cyclin D2	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr12-1346	chr12	4411180	4413309	+	33.9	2129	"3' UTR (NM_001759, exon 5 of 5)"	"3' UTR (NM_001759, exon 5 of 5)"	-18115	NM_020375	57103	Hs.504545	NM_020375	ENSG00000078237	TIGAR	C12orf5|FR2BP	TP53 induced glycolysis regulatory phosphatase	protein-coding	33.92	4.85	6.993814433	7.28E-14
chr12-1348	chr12	5067518	5068518	+	14.1	1000	Intergenic	Intergenic	48945	NM_000217	3736	Hs.416139	NM_000217	ENSG00000111262	KCNA1	AEMK|EA1|HBK1|HUK1|KV1.1|MBK1|MK1|RBK1	potassium voltage-gated channel subfamily A member 1	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr12-1351	chr12	5151166	5152166	+	16	1000	Intergenic	Intergenic	-1419	NM_002234	3741	Hs.150208	NM_002234	ENSG00000130037	KCNA5	ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1	potassium voltage-gated channel subfamily A member 5	protein-coding	16	2.91	5.498281787	4.98E-06
chr12-1354	chr12	5263314	5264682	+	20.5	1368	Intergenic	MER113|DNA|hAT-Charlie	88319	NR_120476	101929584	Hs.436529	NR_120476	ENSG00000256115	LOC101929584	-	uncharacterized LOC101929584	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr12-1356	chr12	5354201	5355201	+	15.4	1000	Intergenic	AluJr|SINE|Alu	-2384	NR_120477	101929584	Hs.436529	NR_120476	ENSG00000256115	LOC101929584	-	uncharacterized LOC101929584	ncRNA	15.36	0	15.82260557	1.26E-14
chr12-1363	chr12	5918786	5919786	+	16	1000	"intron (NM_001278596, intron 7 of 25)"	"intron (NM_001278596, intron 7 of 25)"	135139	NM_001278596	57101	Hs.148970	NM_020373	ENSG00000047617	ANO2	C12orf3|TMEM16B	anoctamin 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr12-1364	chr12	5964193	5966167	+	31.4	1974	"intron (NM_001278596, intron 3 of 25)"	Charlie25|DNA|hAT-Charlie	89245	NM_001278596	57101	Hs.148970	NM_020373	ENSG00000047617	ANO2	C12orf3|TMEM16B	anoctamin 2	protein-coding	31.36	5.34	5.872659176	2.29E-11
chr12-1369	chr12	6102816	6103816	+	15.4	1000	"exon (NM_000552, exon 37 of 52)"	"exon (NM_000552, exon 37 of 52)"	-47918	NM_001278597	57101	Hs.148970	NM_020373	ENSG00000047617	ANO2	C12orf3|TMEM16B	anoctamin 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr12-1371	chr12	6383436	6388218	+	62.1	4782	Intergenic	Intergenic	-33775	NM_018173	55200	Hs.631660	NM_018173	ENSG00000008323	PLEKHG6	MyoGEF	pleckstrin homology and RhoGEF domain containing G6	protein-coding	62.09	10.68	5.813670412	3.83E-21
chr12-1374	chr12	6416731	6417731	+	16	1000	Intergenic	Intergenic	-2371	NM_018173	55200	Hs.631660	NM_018173	ENSG00000008323	PLEKHG6	MyoGEF	pleckstrin homology and RhoGEF domain containing G6	protein-coding	16	1.94	8.24742268	7.67E-08
chr12-1379	chr12	8815852	8816852	+	16	1000	promoter-TSS (NR_123734)	promoter-TSS (NR_123734)	-868	NR_123733	8076	Hs.512842	NM_003480	ENSG00000197614	MFAP5	AAT9|MAGP-2|MAGP2|MFAP-5|MP25	microfibrillar associated protein 5	protein-coding	16	3.88	4.12371134	7.91E-05
chr12-1382	chr12	12437789	12438789	+	16	1000	Intergenic	MIR|SINE|MIR	-18478	NM_002336	4040	Hs.584775	NM_002336	ENSG00000070018	LRP6	ADCAD2|STHAG7	LDL receptor related protein 6	protein-coding	16	3.4	4.705882353	2.25E-05
chr12-1387	chr12	13105322	13106322	+	16	1000	Intergenic	Intergenic	-2504	NM_018654	55507	Hs.644599	NM_018654	ENSG00000111291	GPRC5D	-	G protein-coupled receptor class C group 5 member D	protein-coding	16	2.43	6.58436214	7.90E-07
chr12-139	chr12	49735877	49737138	+	23	1261	Intergenic	CpG	-4193	NM_001304944	79962	Hs.659300	NM_024902	ENSG00000178401	DNAJC22	wus	DnaJ heat shock protein family (Hsp40) member C22	protein-coding	23.04	5.34	4.314606742	4.49E-07
chr12-1391	chr12	13341944	13342944	+	16.6	1000	Intergenic	Intergenic	-7158	NM_001423	2012	Hs.719042	NM_001423	ENSG00000134531	EMP1	CL-20|EMP-1|TMP	epithelial membrane protein 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr12-1392	chr12	13374959	13375959	+	16.6	1000	Intergenic	Intergenic	25857	NM_001423	2012	Hs.719042	NM_001423	ENSG00000134531	EMP1	CL-20|EMP-1|TMP	epithelial membrane protein 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr12-1393	chr12	13464296	13465296	+	15.4	1000	Intergenic	L2a|LINE|L2	64883	NR_036555	283422	Hs.448717	NM_182558	ENSG00000180861	LINC01559	C12orf36	long intergenic non-protein coding RNA 1559	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr12-1394	chr12	13698914	13699914	+	16.6	1000	Intergenic	Intergenic	-169735	NR_036555	283422	Hs.448717	NM_182558	ENSG00000180861	LINC01559	C12orf36	long intergenic non-protein coding RNA 1559	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr12-1395	chr12	14827381	14829019	+	23	1638	"intron (NM_004963, intron 7 of 26)"	"intron (NM_004963, intron 7 of 26)"	21319	NM_004963	2984	Hs.524278	NM_004963	ENSG00000070019	GUCY2C	DIAR6|GC-C|GUC2C|MECIL|MUCIL|STAR	guanylate cyclase 2C	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr12-1397	chr12	15171268	15172268	+	16	1000	Intergenic	L1MC2|LINE|L1	17001	NR_120466	101928340	Hs.401232	NR_120466	ENSG00000255727	LINC01489	-	long intergenic non-protein coding RNA 1489	ncRNA	16	1.94	8.24742268	7.67E-08
chr12-1399	chr12	22873398	22874398	+	15.4	1000	Intergenic	LTR78|LTR|ERV1	95822	NM_001039481	55500	Hs.29464	NM_018638	ENSG00000139163	ETNK1	EKI|EKI 1|EKI1|Nbla10396	ethanolamine kinase 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr12-140	chr12	52456466	52458166	+	31.4	1700	Intergenic	Intergenic	-6442	NM_001098673	60673	Hs.9911	NM_021934	ENSG00000123395	ATG101	C12orf44	autophagy related 101	protein-coding	31.36	3.4	9.223529412	1.89E-15
chr12-1403	chr12	27248027	27249027	+	16	1000	Intergenic	Intergenic	-13072	NM_001080406	728858	Hs.334003	NM_001080406	ENSG00000214700	C12orf71	-	chromosome 12 open reading frame 71	protein-coding	16	3.88	4.12371134	7.91E-05
chr12-1407	chr12	27380027	27381027	+	16	1000	Intergenic	MIR|SINE|MIR	-16551	NM_015000	23012	Hs.184523	NM_015000	ENSG00000211455	STK38L	NDR2	serine/threonine kinase 38 like	protein-coding	16	3.88	4.12371134	7.91E-05
chr12-1424	chr12	48355360	48356360	+	16.6	1000	Intergenic	AluSx|SINE|Alu	-1470	NM_001143842	79022	Hs.596726	NM_024056	ENSG00000134291	TMEM106C	-	transmembrane protein 106C	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr12-1427	chr12	48962638	48963638	+	15.4	1000	"intron (NM_002289, intron 1 of 3)"	"intron (NM_002289, intron 1 of 3)"	691	NM_002289	3906	Hs.72938	NM_002289	ENSG00000167531	LALBA	LYZG	lactalbumin alpha	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr12-1429	chr12	49637150	49638150	+	16.6	1000	"intron (NM_001303114, intron 1 of 3)"	"intron (NM_001303114, intron 1 of 3)"	15941	NM_001303114	84790	Hs.652390	NM_032704	ENSG00000167553	TUBA1C	TUBA6|bcm948	tubulin alpha 1c	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr12-1436	chr12	52595432	52596432	+	16	1000	Intergenic	AluSz|SINE|Alu	8707	NM_001242696	283403	Hs.667179	NM_001242696		C12orf80	-	chromosome 12 open reading frame 80	protein-coding	16	3.88	4.12371134	7.91E-05
chr12-1447	chr12	54096203	54097203	+	16	1000	Intergenic	Intergenic	24604	NR_026554	57658	Hs.156667	NM_020898	ENSG00000012822	CALCOCO1	Cocoa|PP13275|calphoglin	calcium binding and coiled-coil domain 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr12-1448	chr12	54098877	54100508	+	27.5	1631	Intergenic	AluSx1|SINE|Alu	21615	NR_026554	57658	Hs.156667	NM_020898	ENSG00000012822	CALCOCO1	Cocoa|PP13275|calphoglin	calcium binding and coiled-coil domain 1	protein-coding	27.52	6.31	4.36133122	6.42E-08
chr12-1450	chr12	54151841	54152841	+	16.6	1000	Intergenic	Intergenic	-1523	NR_104332	102216268	Hs.742074	NR_104332	ENSG00000260492	CISTR	CISTR-ACT|CISTRACT|re52431	chondrogenesis-associated transcript	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr12-1455	chr12	54328116	54330010	+	34.6	1894	TTS (NR_047507)	TTS (NR_047507)	-3513	NM_017410	3229	Hs.118608	NM_017410	ENSG00000123364	HOXC13	ECTD9|HOX3|HOX3G	homeobox C13	protein-coding	34.56	7.77	4.447876448	3.74E-10
chr12-1464	chr12	54413848	54418103	+	70.4	4255	"intron (NM_014620, intron 1 of 3)"	"intron (NM_014620, intron 1 of 3)"	5339	NR_003084	3222	Hs.549040	NM_018953	ENSG00000172789	HOXC5	CP11|HOX3|HOX3D	homeobox C5	protein-coding	70.41	12.62	5.579239303	2.28E-23
chr12-1471	chr12	54542116	54543405	+	18.6	1289	Intergenic	Intergenic	22905	NR_026656	400043	Hs.19193	NR_026656	ENSG00000250742	LOC400043	-	uncharacterized LOC400043	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr12-1475	chr12	55060195	55061195	+	16	1000	Intergenic	Intergenic	-18418	NM_053283	117159	Hs.350570	NM_053283	ENSG00000161634	DCD	AIDD|DCD-1|DSEP|HCAP|PIF	dermcidin	protein-coding	16	3.4	4.705882353	2.25E-05
chr12-1481	chr12	57532667	57533667	+	15.4	1000	"intron (NM_002332, intron 2 of 88)"	"intron (NM_002332, intron 2 of 88)"	8235	NR_131938	105751187	Hs.609540	NR_131938	ENSG00000259125	LRP1-AS	-	LRP1 antisense RNA	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr12-1486	chr12	57608363	57615879	+	115.2	7516	"intron (NM_007224, intron 1 of 1)"	"intron (NM_007224, intron 1 of 1)"	1543	NM_007224	11247	Hs.745023	NM_007224	ENSG00000182379	NXPH4	NPH4	neurexophilin 4	protein-coding	115.21	24.27	4.747012773	4.98E-32
chr12-1492	chr12	58023063	58028740	+	76.8	5677	"exon (NM_001276468, exon 2 of 10)"	"exon (NM_001276468, exon 2 of 10)"	563	NM_001276468	2583	Hs.159481	NM_001478	ENSG00000135454	B4GALNT1	GALGT|GALNACT|GalNAc-T|SPG26	"beta-1,4-N-acetyl-galactosaminyltransferase 1"	protein-coding	76.81	17.47	4.396680023	2.34E-20
chr12-1498	chr12	58289956	58290956	+	16	1000	Intergenic	CpG	39491	NR_038269	100506844	Hs.90286	NR_038269		LOC100506844	-	uncharacterized LOC100506844	ncRNA	16	3.88	4.12371134	7.91E-05
chr12-1499	chr12	58497494	58498494	+	16.6	1000	Intergenic	Intergenic	16319	NR_135022	105369785	Hs.539353	NR_135022	ENSG00000257541	LOC105369785	-	uncharacterized LOC105369785	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr12-1500	chr12	64236562	64239534	+	51.8	2972	promoter-TSS (NM_001346201)	promoter-TSS (NM_001346201)	-485	NM_001346201	57522	Hs.210751	NM_020762	ENSG00000196935	SRGAP1	ARHGAP13|NMTC2	SLIT-ROBO Rho GTPase activating protein 1	protein-coding	51.85	7.28	7.122252747	7.57E-21
chr12-1503	chr12	65539771	65540771	+	16	1000	Intergenic	Intergenic	-23080	NM_014319	23592	Hs.744150	NM_014319	ENSG00000174106	LEMD3	MAN1	LEM domain containing 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr12-1506	chr12	66687172	66688172	+	16.6	1000	Intergenic	Intergenic	-8653	NR_135081	92797	Hs.505941	NM_033647	ENSG00000127311	HELB	DHB|hDHB	DNA helicase B	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr12-1507	chr12	66791745	66792745	+	16	1000	"intron (NM_021150, intron 15 of 23)"	L2b|LINE|L2	95920	NM_033647	92797	Hs.505941	NM_033647	ENSG00000127311	HELB	DHB|hDHB	DNA helicase B	protein-coding	16	0	16.4818808	1.26E-14
chr12-1508	chr12	68566246	68567246	+	16	1000	Intergenic	AluJr|SINE|Alu	-13225	NM_000619	3458	Hs.856	NM_000619	ENSG00000111537	IFNG	IFG|IFI	interferon gamma	protein-coding	16	2.91	5.498281787	4.98E-06
chr12-151	chr12	114147685	114148961	+	25.6	1276	Intergenic	Intergenic	63165	NR_110026	100506465	Hs.211461	NR_110025	ENSG00000249550	LINC01234	LCAL84|onco-lncRNA-32	long intergenic non-protein coding RNA 1234	ncRNA	25.6	2.43	10.53497942	2.44E-14
chr12-1511	chr12	68643423	68644423	+	19.8	1000	"intron (NM_020525, intron 4 of 4)"	L3|LINE|CR1	3358	NM_020525	50616	Hs.287369	NM_020525	ENSG00000127318	IL22	IL-21|IL-22|IL-D110|IL-TIF|ILTIF|TIFIL-23|TIFa|zcyto18	interleukin 22	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr12-1512	chr12	69261217	69262217	+	16.6	1000	"intron (NM_001005502, intron 6 of 8)"	"intron (NM_001005502, intron 6 of 8)"	58920	NM_001278462	4193	Hs.484551	NM_002392	ENSG00000135679	MDM2	ACTFS|HDMX|hdm2	MDM2 proto-oncogene	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr12-1513	chr12	69310807	69311807	+	16.6	1000	"intron (NM_001005502, intron 2 of 8)"	"intron (NM_001005502, intron 2 of 8)"	15672	NM_001005502	1368	Hs.654387	NM_001874	ENSG00000135678	CPM	-	carboxypeptidase M	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr12-1514	chr12	69314530	69315530	+	15.4	1000	"intron (NM_001005502, intron 2 of 8)"	AluSx1|SINE|Alu	11949	NM_001005502	1368	Hs.654387	NM_001874	ENSG00000135678	CPM	-	carboxypeptidase M	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr12-1516	chr12	69484210	69485210	+	16	1000	Intergenic	Intergenic	-127690	NM_001874	1368	Hs.654387	NM_001874	ENSG00000135678	CPM	-	carboxypeptidase M	protein-coding	16	2.91	5.498281787	4.98E-06
chr12-1519	chr12	70367108	70368390	+	21.1	1282	Intergenic	Intergenic	148646	NM_182530	196446	Hs.253773	NM_182530	ENSG00000166268	MYRFL	C12orf15|C12orf28|bcm1377	myelin regulatory factor-like	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr12-1523	chr12	77292540	77293540	+	16.6	1000	Intergenic	AluSq2|SINE|Alu	-20220	NM_001300965	1466	Hs.530904	NM_001321	ENSG00000175183	CSRP2	CRP2|LMO5|SmLIM	cysteine and glycine rich protein 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr12-1528	chr12	93399739	93402980	+	52.5	3241	"intron (NR_040096, intron 3 of 4)"	MER34B|LTR|ERV1	-78252	NM_003566	8411	Hs.567367	NM_003566	ENSG00000102189	EEA1	MST105|MSTP105|ZFYVE2	early endosome antigen 1	protein-coding	52.49	8.74	6.005720824	6.11E-19
chr12-1529	chr12	93509847	93510847	+	16	1000	"intron (NR_040096, intron 3 of 4)"	"intron (NR_040096, intron 3 of 4)"	-57795	NR_120492	102724933	Hs.663947	NR_120492	ENSG00000258171	LOC102724933	-	uncharacterized LOC102724933	ncRNA	16	2.91	5.498281787	4.98E-06
chr12-1530	chr12	93548175	93549175	+	16	1000	"intron (NR_040096, intron 3 of 4)"	L2|LINE|L2	-19467	NR_120492	102724933	Hs.663947	NR_120492	ENSG00000258171	LOC102724933	-	uncharacterized LOC102724933	ncRNA	16	1.94	8.24742268	7.67E-08
chr12-1532	chr12	94322707	94323707	+	16.6	1000	"intron (NR_135017, intron 1 of 2)"	THE1B|LTR|ERVL-MaLR	14175	NR_135017	105369911	Hs.577495	NR_135017	ENSG00000257283	LOC105369911	-	uncharacterized LOC105369911	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr12-1534	chr12	94499213	94500213	+	16	1000	Intergenic	MIR|SINE|MIR	-42786	NM_005761	10154	Hs.584845	NM_005761	ENSG00000136040	PLXNC1	CD232|PLXN-C1|VESPR	plexin C1	protein-coding	16	3.88	4.12371134	7.91E-05
chr12-1535	chr12	94540254	94541254	+	16	1000	Intergenic	Intergenic	-1745	NM_005761	10154	Hs.584845	NM_005761	ENSG00000136040	PLXNC1	CD232|PLXN-C1|VESPR	plexin C1	protein-coding	16	3.88	4.12371134	7.91E-05
chr12-1541	chr12	99342426	99343700	+	17.3	1274	"intron (NM_152788, intron 17 of 25)"	"intron (NM_152788, intron 17 of 25)"	-54389	NM_001204080	56899	Hs.506458	NM_020140	ENSG00000185046	ANKS1B	AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr12-1542	chr12	101186179	101187179	+	16	1000	Intergenic	Intergenic	-1695	NM_001286615	121601	Hs.58785	NM_178826	ENSG00000151572	ANO4	TMEM16D	anoctamin 4	protein-coding	16	3.4	4.705882353	2.25E-05
chr12-1545	chr12	104077513	104078513	+	15.4	1000	"intron (NM_017564, intron 26 of 68)"	"intron (NM_017564, intron 26 of 68)"	96944	NM_017564	55576	Hs.408249	NM_017564	ENSG00000136011	STAB2	FEEL2|FELE-2|FELL2|FEX2|HARE|SCARH1	stabilin 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr12-1549	chr12	106108697	106109697	+	15.4	1000	"intron (NR_110109, intron 2 of 4)"	"intron (NR_110109, intron 2 of 4)"	8645	NR_110111	101929110	Hs.145944	NR_110108	ENSG00000257859	CASC18	-	cancer susceptibility candidate 18 (non-protein coding)	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr12-155	chr12	120813286	120814544	+	24.3	1258	Intergenic	Intergenic	-6932	NM_002442	4440	Hs.158311	NM_002442	ENSG00000135097	MSI1	-	musashi RNA binding protein 1	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr12-1553	chr12	106371636	106372636	+	16	1000	Intergenic	Intergenic	161675	NM_014840	9891	Hs.524692	NM_014840	ENSG00000074590	NUAK1	ARK5	NUAK family kinase 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr12-1554	chr12	106499030	106500378	+	18.6	1348	"intron (NM_014840, intron 2 of 6)"	"intron (NM_014840, intron 2 of 6)"	34107	NM_014840	9891	Hs.524692	NM_014840	ENSG00000074590	NUAK1	ARK5	NUAK family kinase 1	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr12-1557	chr12	106522610	106523610	+	16	1000	"intron (NM_014840, intron 1 of 6)"	"intron (NM_014840, intron 1 of 6)"	10701	NM_014840	9891	Hs.524692	NM_014840	ENSG00000074590	NUAK1	ARK5	NUAK family kinase 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr12-1566	chr12	108182362	108183625	+	17.9	1263	Intergenic	MER61-int|LTR|ERV1	14831	NM_203436	121549	Hs.149910	NM_203436	ENSG00000187855	ASCL4	HASH4|bHLHa44	achaete-scute family bHLH transcription factor 4	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr12-1567	chr12	108265092	108266092	+	14.7	1000	Intergenic	AluSc8|SINE|Alu	31956	NR_037629	728739	Hs.741995	NR_037629		LOC728739	-	programmed cell death 2 pseudogene	pseudo	14.72	1.46	10.08219178	3.66E-08
chr12-1568	chr12	108484609	108485609	+	15.4	1000	Intergenic	MIRb|SINE|MIR	-38139	NM_014653	9671	Hs.143591	NM_014653	ENSG00000075035	WSCD2	-	WSC domain containing 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr12-1569	chr12	108521386	108524399	+	44.2	3013	promoter-TSS (NM_014653)	promoter-TSS (NM_014653)	-356	NM_014653	9671	Hs.143591	NM_014653	ENSG00000075035	WSCD2	-	WSC domain containing 2	protein-coding	44.17	8.74	5.053775744	1.04E-13
chr12-157	chr12	132329460	132331572	+	39	2112	"intron (NM_016155, intron 8 of 9)"	"intron (NM_016155, intron 8 of 9)"	17578	NM_016155	4326	Hs.709245	NM_016155	ENSG00000198598	MMP17	MMP-17|MT4-MMP|MT4MMP|MTMMP4	matrix metallopeptidase 17	protein-coding	39.04	8.25	4.732121212	1.43E-11
chr12-1571	chr12	108630742	108631742	+	15.4	1000	"intron (NM_001304447, intron 8 of 9)"	"intron (NM_001304447, intron 8 of 9)"	83197	NM_001142345	1240	Hs.197143	NM_004072	ENSG00000174600	CMKLR1	CHEMERINR|ChemR23|DEZ|RVER1	chemerin chemokine-like receptor 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr12-1577	chr12	113494223	113495223	+	16.6	1000	promoter-TSS (NM_004416)	promoter-TSS (NM_004416)	-939	NM_004416	1840	Hs.372152	NM_004416	ENSG00000135144	DTX1	hDx-1	deltex E3 ubiquitin ligase 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr12-1579	chr12	114659722	114661351	+	25.6	1629	Intergenic	Intergenic	183432	NM_181486	6910	Hs.381715	NM_000192	ENSG00000089225	TBX5	HOS	T-box 5	protein-coding	25.6	3.4	7.529411765	9.95E-12
chr12-1581	chr12	114780624	114781939	+	21.1	1315	Intergenic	Intergenic	62687	NM_181486	6910	Hs.381715	NM_000192	ENSG00000089225	TBX5	HOS	T-box 5	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr12-1582	chr12	114835295	114836295	+	16	1000	"intron (NM_080717, intron 4 of 7)"	"intron (NM_080717, intron 4 of 7)"	8173	NM_181486	6910	Hs.381715	NM_000192	ENSG00000089225	TBX5	HOS	T-box 5	protein-coding	16	1.46	10.95890411	3.44E-09
chr12-1583	chr12	115132045	115133045	+	15.4	1000	Intergenic	Intergenic	-10576	NM_005996	6926	Hs.744016	NM_005996	ENSG00000135111	TBX3	TBX3-ISO|UMS|XHL	T-box 3	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr12-1585	chr12	116338826	116339826	+	15.4	1000	Intergenic	L2|LINE|L2	247133	NR_030351	693205		NR_030351	ENSG00000207967	MIR620	MIRN620|hsa-mir-620	microRNA 620	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr12-1588	chr12	117678121	117679121	+	14.7	1000	"intron (NM_001204218, intron 21 of 29)"	MIRb|SINE|MIR	-50321	NM_015002	23014	Hs.740376	NM_015002	ENSG00000135108	FBXO21	FBX21	F-box protein 21	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr12-1590	chr12	117763631	117765242	+	21.8	1611	"intron (NM_001204218, intron 2 of 29)"	"intron (NM_001204218, intron 2 of 29)"	-17221	NM_001204214	4842	Hs.654410	NM_000620	ENSG00000089250	NOS1	IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS	nitric oxide synthase 1	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr12-1593	chr12	118312634	118313634	+	16	1000	"intron (NM_173598, intron 1 of 19)"	"intron (NM_173598, intron 1 of 19)"	92894	NM_173598	283455	Hs.375836	NM_173598	ENSG00000171435	KSR2	-	kinase suppressor of ras 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr12-1594	chr12	118401103	118402103	+	15.4	1000	"intron (NM_173598, intron 1 of 19)"	"intron (NM_173598, intron 1 of 19)"	4425	NM_173598	283455	Hs.375836	NM_173598	ENSG00000171435	KSR2	-	kinase suppressor of ras 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr12-1596	chr12	119508362	119509362	+	15.4	1000	"intron (NM_194286, intron 1 of 12)"	"intron (NM_194286, intron 1 of 12)"	89562	NM_194286	84530	Hs.744964	NM_194286	ENSG00000139767	SRRM4	KIAA1853|MU-MB-2.76|nSR100	serine/arginine repetitive matrix 4	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr12-160	chr12	625743	627614	+	35.2	1871	"intron (NM_173593, intron 1 of 19)"	"intron (NM_173593, intron 1 of 19)"	57135	NM_173593	283358	Hs.504416	NM_173593	ENSG00000139044	B4GALNT3	-	"beta-1,4-N-acetyl-galactosaminyltransferase 3"	protein-coding	35.2	4.85	7.257731959	1.02E-14
chr12-1601	chr12	121048089	121049376	+	18.6	1287	Intergenic	HERVL-int|LTR|ERVL	-29531	NM_198202	51367	Hs.279913	NM_015918	ENSG00000167272	POP5	HSPC004|RPP2|RPP20|hPop5	"POP5 homolog, ribonuclease P/MRP subunit"	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr12-1604	chr12	124023821	124024821	+	16.6	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	3365	NR_037470	100500909		NR_037470	ENSG00000266655	MIR3908	-	microRNA 3908	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr12-1614	chr12	128781700	128783347	+	25.6	1647	"intron (NM_001136103, intron 1 of 8)"	"intron (NM_001136103, intron 1 of 8)"	3886	NR_037406	100500817		NR_037406	ENSG00000265635	MIR3612	-	microRNA 3612	ncRNA	25.6	4.37	5.85812357	7.40E-10
chr12-1616	chr12	129024641	129025641	+	16.6	1000	"intron (NM_001136103, intron 2 of 8)"	"intron (NM_001136103, intron 2 of 8)"	246504	NR_037406	100500817		NR_037406	ENSG00000265635	MIR3612	-	microRNA 3612	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr12-1617	chr12	130238770	130239770	+	16.6	1000	"intron (NM_133448, intron 1 of 8)"	"intron (NM_133448, intron 1 of 8)"	148942	NM_133448	121256	Hs.507268	NM_133448	ENSG00000151952	TMEM132D	MOLT|PPP1R153	transmembrane protein 132D	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr12-1622	chr12	130719826	130720826	+	16	1000	Intergenic	Intergenic	73322	NM_007197	11211	Hs.31664	NM_007197	ENSG00000111432	FZD10	CD350|FZ-10|Fz10|FzE7|hFz10	frizzled class receptor 10	protein-coding	16	0	16.4818808	1.26E-14
chr12-1623	chr12	130843312	130844312	+	16.6	1000	"intron (NM_004764, intron 14 of 20)"	"intron (NM_004764, intron 14 of 20)"	21379	NM_001190971	9271	Hs.405659	NM_004764	ENSG00000125207	PIWIL1	CT80.1|HIWI|MIWI|PIWI	piwi like RNA-mediated gene silencing 1	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr12-1624	chr12	130898160	130899160	+	15.4	1000	"intron (NM_015347, intron 14 of 18)"	"intron (NM_015347, intron 14 of 18)"	76227	NM_001190971	9271	Hs.405659	NM_004764	ENSG00000125207	PIWIL1	CT80.1|HIWI|MIWI|PIWI	piwi like RNA-mediated gene silencing 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr12-1627	chr12	131007697	131009245	+	26.2	1548	Intergenic	Zaphod|DNA|hAT-Tip100	-6061	NM_015347	23504	Hs.657441	NM_015347	ENSG00000060709	RIMBP2	PPP1R133|RBP2|RIM-BP2	RIMS binding protein 2	protein-coding	26.24	3.88	6.762886598	1.00E-10
chr12-1630	chr12	131522901	131523901	+	14.1	1000	"intron (NM_001330497, intron 14 of 25)"	"intron (NM_001330497, intron 14 of 25)"	-44880	NR_131950	105755954	Hs.677534	NR_131950		LACAT8	-	lung adenocarcinoma-associated transcript 8	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr12-1632	chr12	131702662	131704245	+	25	1583	Intergenic	MER70B|LTR|ERVL	53897	NR_026670	116437	Hs.675497	NR_026670	ENSG00000204603	LINC01257	-	long intergenic non-protein coding RNA 1257	ncRNA	24.96	2.91	8.577319588	5.77E-12
chr12-1633	chr12	131840153	131841153	+	16	1000	"intron (NR_103736, intron 2 of 3)"	"intron (NR_103736, intron 2 of 3)"	8638	NR_103736	338797	Hs.592007	NM_001025466		LOC338797	-	uncharacterized LOC338797	ncRNA	16	1.94	8.24742268	7.67E-08
chr12-1637	chr12	132313543	132316154	+	55.7	2611	"intron (NM_016155, intron 1 of 9)"	CpG	1910	NM_016155	4326	Hs.709245	NM_016155	ENSG00000198598	MMP17	MMP-17|MT4-MMP|MT4MMP|MTMMP4	matrix metallopeptidase 17	protein-coding	55.69	5.82	9.568728522	3.84E-27
chr12-1645	chr12	341690	342690	+	15.4	1000	"intron (NM_016615, intron 7 of 14)"	"intron (NM_016615, intron 7 of 14)"	-18819	NM_001122848	6539	Hs.437174	NM_003044	ENSG00000111181	SLC6A12	BGT-1|BGT1|GAT2	solute carrier family 6 member 12	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr12-1657	chr12	2134227	2135783	+	24.3	1556	Intergenic	Intergenic	-21304	NR_135060	196513	Hs.130934	NM_152640	ENSG00000151065	DCP1B	DCP1	decapping mRNA 1B	protein-coding	24.32	5.34	4.554307116	9.72E-08
chr12-1659	chr12	2150171	2151171	+	15.4	1000	Intergenic	AluYk4|SINE|Alu	-6847	NR_046768	100874369	Hs.208723	NR_046768	ENSG00000256257	CACNA1C-IT2	-	CACNA1C intronic transcript 2	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr12-1661	chr12	2162239	2165063	+	49.3	2824	"intron (NM_001129830, intron 1 of 47)"	"intron (NM_001129830, intron 1 of 47)"	1200	NM_199460	775	Hs.118262	NM_000719	ENSG00000151067	CACNA1C	CACH2|CACN2|CACNL1A1|CCHL1A1|CaV1.2|LQT8|TS	calcium voltage-gated channel subunit alpha1 C	protein-coding	49.29	1.94	25.40721649	3.26E-39
chr12-1664	chr12	2223968	2230061	+	80	6093	"intron (NM_001129830, intron 2 of 47)"	"intron (NM_001129830, intron 2 of 47)"	64563	NM_199460	775	Hs.118262	NM_000719	ENSG00000151067	CACNA1C	CACH2|CACN2|CACNL1A1|CCHL1A1|CaV1.2|LQT8|TS	calcium voltage-gated channel subunit alpha1 C	protein-coding	80.01	16.5	4.849090909	6.93E-23
chr12-1668	chr12	2265768	2266768	+	15.4	1000	"intron (NM_001129830, intron 3 of 47)"	HAL1|LINE|L1	66379	NR_046578	100874234	Hs.372570	NR_046578	ENSG00000256025	CACNA1C-AS4	-	CACNA1C antisense RNA 4	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr12-1669	chr12	2353396	2354396	+	15.4	1000	"intron (NM_001129830, intron 3 of 47)"	"intron (NM_001129830, intron 3 of 47)"	-21249	NR_046578	100874234	Hs.372570	NR_046578	ENSG00000256025	CACNA1C-AS4	-	CACNA1C antisense RNA 4	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr12-1670	chr12	2412018	2413018	+	14.7	1000	"intron (NM_001129830, intron 3 of 47)"	MLT1B|LTR|ERVL-MaLR	33576	NR_046769	100874370	Hs.653548	NR_046769		CACNA1C-IT3	-	CACNA1C intronic transcript 3	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr12-1673	chr12	2506861	2507861	+	14.1	1000	"intron (NM_001129830, intron 3 of 47)"	"intron (NM_001129830, intron 3 of 47)"	128419	NR_046769	100874370	Hs.653548	NR_046769		CACNA1C-IT3	-	CACNA1C intronic transcript 3	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr12-1675	chr12	2589891	2590891	+	15.4	1000	"intron (NM_001129830, intron 5 of 47)"	"intron (NM_001129830, intron 5 of 47)"	190995	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr12-1677	chr12	2643173	2644173	+	14.7	1000	"intron (NM_001129830, intron 9 of 47)"	"intron (NM_001129830, intron 9 of 47)"	137713	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr12-1682	chr12	2778347	2779347	+	15.4	1000	"intron (NM_001129830, intron 38 of 47)"	"intron (NM_001129830, intron 38 of 47)"	2539	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr12-1691	chr12	3287736	3288736	+	15.4	1000	"intron (NM_006675, intron 2 of 8)"	"intron (NM_006675, intron 2 of 8)"	101715	NM_006675	10867	Hs.504517	NM_006675	ENSG00000011105	TSPAN9	NET-5|NET5|PP1057	tetraspanin 9	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr12-1694	chr12	3339761	3341063	+	19.8	1302	"intron (NM_006675, intron 3 of 8)"	MIR3|SINE|MIR	-150103	NM_001256536	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr12-1695	chr12	3344623	3345623	+	16	1000	"intron (NM_006675, intron 3 of 8)"	"intron (NM_006675, intron 3 of 8)"	-145392	NM_001256536	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	16	1.94	8.24742268	7.67E-08
chr12-1699	chr12	3469771	3470771	+	16	1000	Intergenic	Intergenic	-20244	NM_001256536	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	16	3.88	4.12371134	7.91E-05
chr12-170	chr12	31741493	31744650	+	60.8	3157	"intron (NR_046909, intron 1 of 2)"	CpG	214	NR_046909	100874249	Hs.627628	NR_046909	ENSG00000255867	DENND5B-AS1	-	DENND5B antisense RNA 1	ncRNA	60.81	8.25	7.370909091	7.69E-25
chr12-1700	chr12	3544905	3549228	+	62.7	4323	"intron (NM_001256536, intron 1 of 9)"	MIRb|SINE|MIR	-53298	NM_019854	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	62.73	10.68	5.873595506	6.50E-22
chr12-1702	chr12	3575938	3577266	+	18.6	1328	"intron (NM_001256536, intron 1 of 9)"	"intron (NM_001256536, intron 1 of 9)"	-23762	NM_019854	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr12-1705	chr12	3627065	3628659	+	25	1594	"intron (NM_019854, intron 1 of 9)"	HERVP71A-int|LTR|ERV1	-25877	NR_126055	100129223	Hs.586788	NR_126055		THCAT155	-	thyroid cancer-associated transcript 155	ncRNA	24.96	3.88	6.432989691	6.68E-10
chr12-171	chr12	48394541	48398850	+	74.2	4309	"intron (NM_001844, intron 1 of 53)"	"intron (NM_001844, intron 1 of 53)"	1590	NM_001844	1280	Hs.408182	NM_001844	ENSG00000139219	COL2A1	ANFH|AOM|COL11A3|SEDC|STL1	collagen type II alpha 1 chain	protein-coding	74.25	14.08	5.2734375	2.15E-23
chr12-1711	chr12	4024396	4026252	+	28.8	1856	Intergenic	MLT1F-int|LTR|ERVL-MaLR	-42710	NM_001286521	57097	Hs.657268	NM_020367	ENSG00000111224	PARP11	ARTD11|C12orf6|MIB006	poly(ADP-ribose) polymerase family member 11	protein-coding	28.8	2.43	11.85185185	1.88E-16
chr12-1716	chr12	4063832	4064832	+	15.4	1000	Intergenic	L1MEe|LINE|L1	-81718	NM_001286521	57097	Hs.657268	NM_020367	ENSG00000111224	PARP11	ARTD11|C12orf6|MIB006	poly(ADP-ribose) polymerase family member 11	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr12-1717	chr12	4077270	4078532	+	18.6	1262	Intergenic	Intergenic	-95287	NM_001286521	57097	Hs.657268	NM_020367	ENSG00000111224	PARP11	ARTD11|C12orf6|MIB006	poly(ADP-ribose) polymerase family member 11	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr12-1718	chr12	4109545	4110932	+	20.5	1387	Intergenic	L2c|LINE|L2	-127624	NM_001286521	57097	Hs.657268	NM_020367	ENSG00000111224	PARP11	ARTD11|C12orf6|MIB006	poly(ADP-ribose) polymerase family member 11	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr12-1719	chr12	4116549	4117549	+	16	1000	Intergenic	Intergenic	-134435	NM_001286521	57097	Hs.657268	NM_020367	ENSG00000111224	PARP11	ARTD11|C12orf6|MIB006	poly(ADP-ribose) polymerase family member 11	protein-coding	16	2.43	6.58436214	7.90E-07
chr12-1720	chr12	4137284	4138284	+	15.4	1000	Intergenic	L2b|LINE|L2	-155170	NM_001286521	57097	Hs.657268	NM_020367	ENSG00000111224	PARP11	ARTD11|C12orf6|MIB006	poly(ADP-ribose) polymerase family member 11	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr12-1721	chr12	4271138	4272138	+	15.4	1000	Intergenic	Charlie2a|DNA|hAT-Charlie	-111264	NM_001759	894	Hs.376071	NM_001759	ENSG00000118971	CCND2	KIAK0002|MPPH3	cyclin D2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr12-1729	chr12	4966453	4968479	+	32	2026	Intergenic	Intergenic	49124	NM_002235	3742	Hs.306190	NM_002235	ENSG00000130035	KCNA6	HBK2|KV1.6|PPP1R96	potassium voltage-gated channel subfamily A member 6	protein-coding	32	4.85	6.597938144	5.03E-13
chr12-174	chr12	54339246	54356583	+	277.2	17337	promoter-TSS (NM_173860)	promoter-TSS (NM_173860)	-738	NM_173860	3228	Hs.381267	NM_173860	ENSG00000123407	HOXC12	HOC3F|HOX3|HOX3F	homeobox C12	protein-coding	277.15	54.85	5.052871468	9.48E-79
chr12-1740	chr12	5185160	5188693	+	51.2	3533	Intergenic	Intergenic	33841	NM_002234	3741	Hs.150208	NM_002234	ENSG00000130037	KCNA5	ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1	potassium voltage-gated channel subfamily A member 5	protein-coding	51.21	4.85	10.55876289	4.33E-27
chr12-1742	chr12	5202930	5203930	+	16	1000	Intergenic	Intergenic	50345	NM_002234	3741	Hs.150208	NM_002234	ENSG00000130037	KCNA5	ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1	potassium voltage-gated channel subfamily A member 5	protein-coding	16	0.97	16.49484536	3.54E-11
chr12-1743	chr12	5212454	5213454	+	16	1000	Intergenic	MIR3|SINE|MIR	59869	NM_002234	3741	Hs.150208	NM_002234	ENSG00000130037	KCNA5	ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1	potassium voltage-gated channel subfamily A member 5	protein-coding	16	0.97	16.49484536	3.54E-11
chr12-1749	chr12	5877189	5878189	+	15.4	1000	"intron (NM_001278596, intron 10 of 25)"	"intron (NM_001278596, intron 10 of 25)"	176736	NM_001278596	57101	Hs.148970	NM_020373	ENSG00000047617	ANO2	C12orf3|TMEM16B	anoctamin 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr12-1758	chr12	6157655	6159784	+	30.7	2129	"intron (NM_000552, intron 16 of 51)"	"intron (NM_000552, intron 16 of 51)"	75122	NM_000552	7450	Hs.440848	NM_000552	ENSG00000110799	VWF	F8VWF|VWD	von Willebrand factor	protein-coding	30.72	6.31	4.868462758	6.13E-10
chr12-1762	chr12	6225743	6226743	+	15.4	1000	"intron (NM_000552, intron 3 of 51)"	"intron (NM_000552, intron 3 of 51)"	7598	NM_000552	7450	Hs.440848	NM_000552	ENSG00000110799	VWF	F8VWF|VWD	von Willebrand factor	protein-coding	15.36	0	15.82260557	1.26E-14
chr12-1764	chr12	6291142	6292671	+	25	1529	Intergenic	Intergenic	-16967	NM_001330312	928	Hs.114286	NM_001769	ENSG00000010278	CD9	BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29	CD9 molecule	protein-coding	24.96	1.94	12.86597938	5.33E-15
chr12-1768	chr12	6421731	6422731	+	16	1000	"5' UTR (NM_001144857, exon 1 of 15)"	"5' UTR (NM_001144857, exon 1 of 15)"	414	NM_001144857	55200	Hs.631660	NM_018173	ENSG00000008323	PLEKHG6	MyoGEF	pleckstrin homology and RhoGEF domain containing G6	protein-coding	16	0.97	16.49484536	3.54E-11
chr12-1781	chr12	12261501	12262501	+	16	1000	Intergenic	THE1C|LTR|ERVL-MaLR	-2885	NR_036262	100422885		NR_036262	ENSG00000283498	MIR1244-2	-	microRNA 1244-2	ncRNA	16	3.4	4.705882353	2.25E-05
chr12-1786	chr12	13265847	13266847	+	16	1000	Intergenic	Intergenic	-9717	NM_001206842	83445	Hs.240053	NM_031289	ENSG00000111305	GSG1	-	germ cell associated 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr12-1788	chr12	13372003	13373003	+	16	1000	Intergenic	THE1D|LTR|ERVL-MaLR	22901	NM_001423	2012	Hs.719042	NM_001423	ENSG00000134531	EMP1	CL-20|EMP-1|TMP	epithelial membrane protein 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr12-1789	chr12	13510076	13511076	+	15.4	1000	Intergenic	L1MC5|LINE|L1	19103	NR_036555	283422	Hs.448717	NM_182558	ENSG00000180861	LINC01559	C12orf36	long intergenic non-protein coding RNA 1559	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr12-179	chr12	54423485	54426364	+	60.8	2879	TTS (NM_004503)	TTS (NM_004503)	-1908	NM_018953	3222	Hs.549040	NM_018953	ENSG00000172789	HOXC5	CP11|HOX3|HOX3D	homeobox C5	protein-coding	60.81	13.11	4.638443936	5.29E-17
chr12-1790	chr12	13557716	13558716	+	15.4	1000	Intergenic	Intergenic	-28537	NR_036555	283422	Hs.448717	NM_182558	ENSG00000180861	LINC01559	C12orf36	long intergenic non-protein coding RNA 1559	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr12-1793	chr12	13785335	13786335	+	15.4	1000	"intron (NM_000834, intron 4 of 12)"	MER5B|DNA|hAT-Charlie	-256156	NR_036555	283422	Hs.448717	NM_182558	ENSG00000180861	LINC01559	C12orf36	long intergenic non-protein coding RNA 1559	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr12-1797	chr12	14866980	14868254	+	17.3	1274	Intergenic	LTR9|LTR|ERV1	-18098	NM_004963	2984	Hs.524278	NM_004963	ENSG00000070019	GUCY2C	DIAR6|GC-C|GUC2C|MECIL|MUCIL|STAR	guanylate cyclase 2C	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr12-1799	chr12	15154650	15156386	+	27.5	1736	"intron (NR_120466, intron 1 of 3)"	"intron (NR_120466, intron 1 of 3)"	751	NR_120466	101928340	Hs.401232	NR_120466	ENSG00000255727	LINC01489	-	long intergenic non-protein coding RNA 1489	ncRNA	27.52	2.43	11.32510288	2.19E-15
chr12-1805	chr12	22486697	22488000	+	20.5	1303	"5' UTR (NM_003034, exon 1 of 5)"	"5' UTR (NM_003034, exon 1 of 5)"	300	NM_001304450	6489	Hs.408614	NM_003034	ENSG00000111728	ST8SIA1	GD3S|SIAT8|SIAT8-A|SIAT8A|ST8SiaI	"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1"	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr12-1808	chr12	26275381	26283162	+	156.2	7781	Intergenic	CpG	-1268	NM_030762	79365	Hs.177841	NM_030762	ENSG00000123095	BHLHE41	BHLHB3|DEC2|SHARP1|hDEC2	basic helix-loop-helix family member e41	protein-coding	156.18	29.12	5.363324176	5.81E-48
chr12-1811	chr12	26377757	26380149	+	31.4	2392	"intron (NM_001135823, intron 2 of 2)"	"intron (NM_001135823, intron 2 of 2)"	30447	NM_005086	8082	Hs.183428	NM_005086	ENSG00000123096	SSPN	DAGA5|KRAG|NSPN|SPN1|SPN2	sarcospan	protein-coding	31.36	4.85	6.465979381	3.34E-12
chr12-1816	chr12	27278051	27279051	+	16	1000	Intergenic	Intergenic	-43096	NM_001080406	728858	Hs.334003	NM_001080406	ENSG00000214700	C12orf71	-	chromosome 12 open reading frame 71	protein-coding	16	0.97	16.49484536	3.54E-11
chr12-1817	chr12	27281560	27282560	+	16	1000	Intergenic	Intergenic	-46605	NM_001080406	728858	Hs.334003	NM_001080406	ENSG00000214700	C12orf71	-	chromosome 12 open reading frame 71	protein-coding	16	2.43	6.58436214	7.90E-07
chr12-1820	chr12	29040879	29041879	+	15.4	1000	Intergenic	MLT1E1A|LTR|ERVL-MaLR	-260557	NM_001271783	55711	Hs.684482	NM_018099	ENSG00000064763	FAR2	HEL-S-81|MLSTD1|SDR10E2	fatty acyl-CoA reductase 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr12-1826	chr12	31391524	31392524	+	15.4	1000	Intergenic	LTR39-int|LTR|ERV1	-85226	NR_026806	79857	Hs.534485	NM_024799	ENSG00000177340	FLJ13224	-	uncharacterized LOC79857	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr12-1827	chr12	31639894	31640894	+	15.4	1000	"intron (NM_144973, intron 2 of 20)"	AluSx3|SINE|Alu	-102463	NR_046909	100874249	Hs.627628	NR_046909	ENSG00000255867	DENND5B-AS1	-	DENND5B antisense RNA 1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr12-1832	chr12	42299597	42300597	+	16	1000	Intergenic	Intergenic	142106	NR_135040	101927038	Hs.98588	NR_135040	ENSG00000257784	LOC101927038	-	uncharacterized LOC101927038	ncRNA	16	3.4	4.705882353	2.25E-05
chr12-1833	chr12	42893319	42894319	+	14.7	1000	"intron (NM_153026, intron 1 of 7)"	AluSx1|SINE|Alu	-16022	NM_001144882	144165	Hs.524348	NM_153026	ENSG00000139174	PRICKLE1	EPM1B|RILP	prickle planar cell polarity protein 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr12-1844	chr12	48510874	48511874	+	14.7	1000	"intron (NM_001166686, intron 3 of 24)"	L1MC2|LINE|L1	-1639	NM_000289	5213	Hs.75160	NM_000289	ENSG00000152556	PFKM	ATP-PFK|GSD7|PFK-1|PFK1|PFKA|PFKX|PPP1R122	"phosphofructokinase, muscle"	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr12-1847	chr12	49205816	49206816	+	16	1000	Intergenic	Intergenic	-1899	NM_001206917	784	Hs.250712	NM_000725	ENSG00000167535	CACNB3	CAB3|CACNLB3	calcium voltage-gated channel auxiliary subunit beta 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr12-1853	chr12	49738991	49740356	+	16.6	1365	Intergenic	CpG	-1027	NM_001304944	79962	Hs.659300	NM_024902	ENSG00000178401	DNAJC22	wus	DnaJ heat shock protein family (Hsp40) member C22	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr12-186	chr12	108170776	108172034	+	23.7	1258	TTS (NM_203436)	TTS (NM_203436)	3243	NM_203436	121549	Hs.149910	NM_203436	ENSG00000187855	ASCL4	HASH4|bHLHa44	achaete-scute family bHLH transcription factor 4	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr12-1862	chr12	52716768	52718341	+	25	1573	Intergenic	MIRb|SINE|MIR	-2372	NM_002282	3889	Hs.720768	NM_002282	ENSG00000170523	KRT83	HB3|Hb-3|KRTHB3	keratin 83	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr12-1865	chr12	52799643	52801988	+	34.6	2345	promoter-TSS (NM_033033)	promoter-TSS (NM_033033)	-639	NM_033033	3888	Hs.134640	NM_033033	ENSG00000161850	KRT82	HB2|Hb-2|KRTHB2	keratin 82	protein-coding	34.56	3.88	8.907216495	5.09E-17
chr12-1868	chr12	52812357	52813357	+	14.1	1000	Intergenic	Intergenic	-12681	NM_033033	3888	Hs.134640	NM_033033	ENSG00000161850	KRT82	HB2|Hb-2|KRTHB2	keratin 82	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr12-1869	chr12	52825005	52826005	+	15.4	1000	"intron (NM_004693, intron 3 of 8)"	"intron (NM_004693, intron 3 of 8)"	2605	NM_004693	9119	Hs.697046	NM_004693	ENSG00000170454	KRT75	K6HF|KB18|PFB	keratin 75	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr12-1870	chr12	52830489	52831795	+	17.3	1306	Intergenic	Intergenic	-3032	NM_004693	9119	Hs.697046	NM_004693	ENSG00000170454	KRT75	K6HF|KB18|PFB	keratin 75	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr12-1877	chr12	53267776	53268776	+	16	1000	Intergenic	CpG	-25498	NM_173352	196374	Hs.665267	NM_173352	ENSG00000170423	KRT78	CK-78|K5B|K78|Kb40	keratin 78	protein-coding	16	1.94	8.24742268	7.67E-08
chr12-1885	chr12	54210351	54211351	+	13.4	1000	Intergenic	Intergenic	-60033	NR_104332	102216268	Hs.742074	NR_104332	ENSG00000260492	CISTR	CISTR-ACT|CISTRACT|re52431	chondrogenesis-associated transcript	ncRNA	13.44	0	13.84477987	1.16E-11
chr12-1886	chr12	54215946	54216946	+	15.4	1000	Intergenic	AluSx|SINE|Alu	-65628	NR_104332	102216268	Hs.742074	NR_104332	ENSG00000260492	CISTR	CISTR-ACT|CISTRACT|re52431	chondrogenesis-associated transcript	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr12-1893	chr12	54317675	54319692	+	36.5	2017	Intergenic	Intergenic	-13893	NM_017410	3229	Hs.118608	NM_017410	ENSG00000123364	HOXC13	ECTD9|HOX3|HOX3G	homeobox C13	protein-coding	36.48	6.8	5.364705882	3.95E-12
chr12-190	chr12	125182729	125189675	+	110.1	6946	Intergenic	Intergenic	-134192	NM_001206654	9612	Hs.137510	NM_006312	ENSG00000196498	NCOR2	CTG26|N-CoR2|SMAP270|SMRT|SMRTE|SMRTE-tau|TNRC14|TRAC|TRAC-1|TRAC1	nuclear receptor corepressor 2	protein-coding	110.09	22.33	4.930138827	8.19E-32
chr12-1912	chr12	54466825	54468162	+	20.5	1337	"intron (NR_026655, intron 1 of 1)"	"intron (NR_026655, intron 1 of 1)"	8114	NR_026658	100240735	Hs.635297	NR_026658	ENSG00000250654	LOC100240735	-	uncharacterized LOC100240735	ncRNA	20.48	3.4	6.023529412	2.41E-08
chr12-1915	chr12	54567084	54569180	+	35.8	2096	Intergenic	Intergenic	14609	NM_001243789	23583	Hs.632721	NM_014311	ENSG00000123415	SMUG1	FDG|HMUDG|UNG3	single-strand-selective monofunctional uracil-DNA glycosylase 1	protein-coding	35.84	4.85	7.389690722	1.37E-15
chr12-1920	chr12	54984750	54987269	+	35.8	2519	Intergenic	MARNA|DNA|TcMar-Mariner	-3566	NM_006741	5502	Hs.505662	NM_006741	ENSG00000135447	PPP1R1A	I1|IPP1	protein phosphatase 1 regulatory inhibitor subunit 1A	protein-coding	35.84	4.85	7.389690722	1.37E-15
chr12-1921	chr12	55028744	55030030	+	20.5	1286	promoter-TSS (NM_033277)	promoter-TSS (NM_033277)	-724	NM_033277	90070	Hs.307096	NM_033277	ENSG00000135413	LACRT	-	lacritin	protein-coding	20.48	2.43	8.427983539	2.25E-10
chr12-1925	chr12	57347011	57348011	+	16	1000	"intron (NM_001320108, intron 1 of 2)"	"intron (NM_001320108, intron 1 of 2)"	5647	NM_001320108	8608	Hs.134958	NM_003708	ENSG00000139547	RDH16	RODH-4|SDR9C8	retinol dehydrogenase 16 (all-trans)	protein-coding	16	2.91	5.498281787	4.98E-06
chr12-1928	chr12	57604593	57606694	+	31.4	2101	"intron (NM_002332, intron 86 of 88)"	"intron (NM_002332, intron 86 of 88)"	-4935	NM_007224	11247	Hs.745023	NM_007224	ENSG00000182379	NXPH4	NPH4	neurexophilin 4	protein-coding	31.36	4.85	6.465979381	3.34E-12
chr12-1937	chr12	63024209	63025209	+	15.4	1000	Intergenic	Intergenic	27243	NR_029661	406891		NR_029661	ENSG00000199179	MIRLET7I	LET7I|MIRNLET7I|hsa-let-7i|let-7i	microRNA let-7i	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr12-1940	chr12	64780631	64781631	+	16	1000	"intron (NM_001170633, intron 1 of 12)"	"intron (NM_001170633, intron 1 of 12)"	3214	NM_001170633	115749	Hs.535190	NM_001099676	ENSG00000185306	C12orf56	-	chromosome 12 open reading frame 56	protein-coding	16	2.91	5.498281787	4.98E-06
chr12-1944	chr12	67462992	67464808	+	33.3	1816	Intergenic	Intergenic	26164	NR_120490	102724421	Hs.135774	NR_120490	ENSG00000257083	LOC102724421	-	uncharacterized LOC102724421	ncRNA	33.28	2.91	11.43642612	5.32E-19
chr12-1946	chr12	67808269	67809269	+	16	1000	Intergenic	Intergenic	-105093	NR_103861	100507175	Hs.505986	NR_103861	ENSG00000203585	LOC100507175	-	uncharacterized LOC100507175	ncRNA	16	3.88	4.12371134	7.91E-05
chr12-1949	chr12	68509509	68510509	+	14.7	1000	Intergenic	Tigger1|DNA|TcMar-Tigger	43512	NM_000619	3458	Hs.856	NM_000619	ENSG00000111537	IFNG	IFG|IFI	interferon gamma	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr12-1957	chr12	72142398	72143398	+	14.7	1000	Intergenic	Intergenic	-5745	NM_014999	23011	Hs.524590	NM_014999	ENSG00000080371	RAB21	-	"RAB21, member RAS oncogene family"	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr12-1958	chr12	82153690	82154971	+	19.8	1281	Intergenic	MER5A1|DNA|hAT-Charlie	-1221	NM_003625	8499	Hs.506216	NM_003625	ENSG00000139220	PPFIA2	-	PTPRF interacting protein alpha 2	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr12-1960	chr12	93565543	93567097	+	19.8	1554	"intron (NR_040096, intron 3 of 4)"	LTR33A|LTR|ERVL	-1822	NR_120492	102724933	Hs.663947	NR_120492	ENSG00000258171	LOC102724933	-	uncharacterized LOC102724933	ncRNA	19.84	1.94	10.22680412	9.57E-11
chr12-1963	chr12	95044612	95045612	+	16	1000	promoter-TSS (NM_020698)	promoter-TSS (NM_020698)	-774	NM_020698	57458	Hs.370410	NM_020698	ENSG00000057704	TMCC3	-	transmembrane and coiled-coil domain family 3	protein-coding	16	1.94	8.24742268	7.67E-08
chr12-1965	chr12	95120945	95121945	+	15.4	1000	Intergenic	L2a|LINE|L2	-77107	NM_020698	57458	Hs.370410	NM_020698	ENSG00000057704	TMCC3	-	transmembrane and coiled-coil domain family 3	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr12-1966	chr12	95161911	95162911	+	14.7	1000	Intergenic	Intergenic	-65763	NR_030171	574449		NR_030171		MIR492	MIRN492|hsa-mir-492	microRNA 492	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr12-1967	chr12	95201944	95202944	+	14.1	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	-25730	NR_030171	574449		NR_030171		MIR492	MIRN492|hsa-mir-492	microRNA 492	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr12-1968	chr12	95225094	95226094	+	15.4	1000	Intergenic	Intergenic	-2580	NR_030171	574449		NR_030171		MIR492	MIRN492|hsa-mir-492	microRNA 492	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr12-1970	chr12	96906717	96907717	+	15.4	1000	"intron (NM_001306084, intron 5 of 67)"	MER94|DNA|hAT-Blackjack	23868	NM_001306084	144535	Hs.382121	NM_198520	ENSG00000188596	CFAP54	C12orf55|C12orf63	cilia and flagella associated protein 54	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr12-1973	chr12	97693471	97694471	+	15.4	1000	Intergenic	MIRc|SINE|MIR	-164828	NR_024037	196475	Hs.652568	NR_024037	ENSG00000255794	RMST	LINC00054|NCRMS|NCRNA00054	rhabdomyosarcoma 2 associated transcript (non-protein coding)	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr12-1974	chr12	98615424	98616699	+	21.8	1275	Intergenic	Intergenic	-226835	NR_036189	100422924		NR_036189	ENSG00000263890	MIR4303	-	microRNA 4303	ncRNA	21.76	2.91	7.47766323	3.87E-10
chr12-1979	chr12	101117605	101118605	+	16	1000	Intergenic	L2c|LINE|L2	-70269	NM_001286615	121601	Hs.58785	NM_178826	ENSG00000151572	ANO4	TMEM16D	anoctamin 4	protein-coding	16	3.4	4.705882353	2.25E-05
chr12-1983	chr12	103352751	103353751	+	14.7	1000	"3' UTR (NM_004316, exon 2 of 2)"	"3' UTR (NM_004316, exon 2 of 2)"	1799	NM_004316	429	Hs.703025	NM_004316	ENSG00000139352	ASCL1	ASH1|HASH1|MASH1|bHLHa46	achaete-scute family bHLH transcription factor 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr12-1989	chr12	105354662	105355662	+	16	1000	Intergenic	AluSz|SINE|Alu	-24936	NM_152318	121053	Hs.295563	NM_152318	ENSG00000151131	C12orf45	-	chromosome 12 open reading frame 45	protein-coding	16	1.94	8.24742268	7.67E-08
chr12-199	chr12	12417659	12421656	+	92.8	3997	"exon (NM_002336, exon 1 of 23)"	"exon (NM_002336, exon 1 of 23)"	154	NM_002336	4040	Hs.584775	NM_002336	ENSG00000070018	LRP6	ADCAD2|STHAG7	LDL receptor related protein 6	protein-coding	92.81	14.56	6.374313187	2.37E-33
chr12-1990	chr12	105876357	105877357	+	16	1000	Intergenic	Intergenic	152443	NM_001145199	387882	Hs.368938	NM_207376	ENSG00000235162	C12orf75	AGD3|OCC-1|OCC1	chromosome 12 open reading frame 75	protein-coding	16	0.97	16.49484536	3.54E-11
chr12-2001	chr12	108072512	108073512	+	14.1	1000	Intergenic	AluSx|SINE|Alu	-6497	NM_001317963	11137	Hs.506652	NM_007062	ENSG00000136045	PWP1	IEF-SSP-9502	"PWP1 homolog, endonuclein"	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr12-2003	chr12	108199251	108200251	+	15.4	1000	Intergenic	Intergenic	31589	NM_203436	121549	Hs.149910	NM_203436	ENSG00000187855	ASCL4	HASH4|bHLHa44	achaete-scute family bHLH transcription factor 4	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr12-2005	chr12	108332937	108333937	+	16	1000	Intergenic	Intergenic	-35889	NR_037629	728739	Hs.741995	NR_037629		LOC728739	-	programmed cell death 2 pseudogene	pseudo	16	0.97	16.49484536	3.54E-11
chr12-2006	chr12	108347294	108348294	+	16	1000	Intergenic	Intergenic	-50246	NR_037629	728739	Hs.741995	NR_037629		LOC728739	-	programmed cell death 2 pseudogene	pseudo	16	1.94	8.24742268	7.67E-08
chr12-2010	chr12	108732486	108733486	+	15.4	1000	"5' UTR (NM_004072, exon 1 of 3)"	"5' UTR (NM_004072, exon 1 of 3)"	108	NM_001142344	1240	Hs.197143	NM_004072	ENSG00000174600	CMKLR1	CHEMERINR|ChemR23|DEZ|RVER1	chemerin chemokine-like receptor 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr12-2012	chr12	109742014	109753319	+	181.8	11305	promoter-TSS (NM_213596)	promoter-TSS (NM_213596)	-641	NM_213596	121643	Hs.528316	NM_213596	ENSG00000139445	FOXN4	-	forkhead box N4	protein-coding	181.78	30.09	6.041209704	1.41E-61
chr12-2019	chr12	111571605	111572605	+	14.1	1000	"intron (NM_015267, intron 1 of 21)"	ERVL-B4-int|LTR|ERVL	100277	NM_015267	23316	Hs.124953	NM_015267	ENSG00000111249	CUX2	CDP2|CUTL2	cut like homeobox 2	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr12-2022	chr12	113937523	113938806	+	20.5	1283	Intergenic	Intergenic	-28287	NM_022363	64211	Hs.302029	NM_022363	ENSG00000089116	LHX5	-	LIM homeobox 5	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr12-2023	chr12	113946091	113949010	+	34.6	2919	Intergenic	AluSz6|SINE|Alu	-37673	NM_022363	64211	Hs.302029	NM_022363	ENSG00000089116	LHX5	-	LIM homeobox 5	protein-coding	34.56	7.77	4.447876448	3.74E-10
chr12-2032	chr12	115124389	115125389	+	16	1000	Intergenic	CpG	-2920	NM_005996	6926	Hs.744016	NM_005996	ENSG00000135111	TBX3	TBX3-ISO|UMS|XHL	T-box 3	protein-coding	16	1.94	8.24742268	7.67E-08
chr12-2036	chr12	117289451	117290451	+	15.4	1000	"intron (NM_001109903, intron 11 of 11)"	"intron (NM_001109903, intron 11 of 11)"	29281	NR_073189	8739	Hs.87247	NM_003806	ENSG00000135116	HRK	DP5|HARAKIRI	"harakiri, BCL2 interacting protein"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr12-2037	chr12	118083832	118084832	+	14.7	1000	"intron (NM_173598, intron 5 of 19)"	"intron (NM_173598, intron 5 of 19)"	-284725	NM_001204218	4842	Hs.654410	NM_000620	ENSG00000089250	NOS1	IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS	nitric oxide synthase 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr12-2038	chr12	118248414	118249414	+	15.4	1000	"intron (NM_173598, intron 3 of 19)"	"intron (NM_173598, intron 3 of 19)"	157114	NM_173598	283455	Hs.375836	NM_173598	ENSG00000171435	KSR2	-	kinase suppressor of ras 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr12-2040	chr12	118407123	118408373	+	20.5	1250	Intergenic	AluJr4|SINE|Alu	-1720	NM_173598	283455	Hs.375836	NM_173598	ENSG00000171435	KSR2	-	kinase suppressor of ras 2	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr12-2044	chr12	124321367	124322367	+	15.4	1000	"intron (NM_207437, intron 27 of 77)"	AluSx|SINE|Alu	74825	NM_207437	196385	Hs.622654	NM_207437	ENSG00000197653	DNAH10	-	dynein axonemal heavy chain 10	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr12-2045	chr12	124362306	124363306	+	15.4	1000	"intron (NM_207437, intron 47 of 77)"	"intron (NM_207437, intron 47 of 77)"	93831	NM_001304959	80212	Hs.114111	NM_025140	ENSG00000119242	CCDC92	-	coiled-coil domain containing 92	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr12-2049	chr12	125669808	125672428	+	35.2	2620	Intergenic	CpG	121205	NM_001319839	65985	Hs.656073	NM_023928	ENSG00000081760	AACS	ACSF1|SUR-5	acetoacetyl-CoA synthetase	protein-coding	35.2	4.85	7.257731959	1.02E-14
chr12-2053	chr12	128965535	128966535	+	14.7	1000	"intron (NM_001136103, intron 2 of 8)"	MIR|SINE|MIR	187398	NR_037406	100500817		NR_037406	ENSG00000265635	MIR3612	-	microRNA 3612	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr12-2056	chr12	130429602	130430602	+	14.7	1000	Intergenic	Intergenic	-41890	NM_133448	121256	Hs.507268	NM_133448	ENSG00000151952	TMEM132D	MOLT|PPP1R153	transmembrane protein 132D	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr12-2057	chr12	131004942	131005942	+	15.4	1000	Intergenic	Intergenic	-3032	NM_015347	23504	Hs.657441	NM_015347	ENSG00000060709	RIMBP2	PPP1R133|RBP2|RIM-BP2	RIMS binding protein 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr12-2059	chr12	131200119	131201374	+	21.8	1255	Intergenic	Intergenic	123073	NM_194356	2054	Hs.437585	NM_001980	ENSG00000111450	STX2	EPIM|EPM|STX2A|STX2B|STX2C	syntaxin 2	protein-coding	21.76	0.97	22.43298969	1.19E-17
chr12-2061	chr12	131414647	131415647	+	16	1000	Intergenic	Intergenic	-23305	NM_198827	283383	Hs.719239	NM_198827	ENSG00000111452	ADGRD1	GPR133|PGR25	adhesion G protein-coupled receptor D1	protein-coding	16	2.91	5.498281787	4.98E-06
chr12-2062	chr12	131550427	131551427	+	14.7	1000	"intron (NM_001330497, intron 14 of 25)"	"intron (NM_001330497, intron 14 of 25)"	-72406	NR_131950	105755954	Hs.677534	NR_131950		LACAT8	-	lung adenocarcinoma-associated transcript 8	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr12-2063	chr12	131576547	131577547	+	15.4	1000	"intron (NM_001330497, intron 16 of 25)"	"intron (NM_001330497, intron 16 of 25)"	-72509	NR_026670	116437	Hs.675497	NR_026670	ENSG00000204603	LINC01257	-	long intergenic non-protein coding RNA 1257	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr12-2067	chr12	132031378	132032678	+	23	1300	Intergenic	Intergenic	-163604	NM_004592	6433	Hs.308171	NM_004592	ENSG00000061936	SFSWAP	SFRS8|SWAP	splicing factor SWAP homolog	protein-coding	23.04	2.43	9.481481481	2.61E-12
chr12-2068	chr12	132088210	132089210	+	15.4	1000	Intergenic	Intergenic	-106922	NM_004592	6433	Hs.308171	NM_004592	ENSG00000061936	SFSWAP	SFRS8|SWAP	splicing factor SWAP homolog	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr12-2072	chr12	132363997	132364997	+	16	1000	Intergenic	HERV17-int|LTR|ERV1	-14782	NM_003565	8408	Hs.47061	NM_003565	ENSG00000177169	ULK1	ATG1|ATG1A|UNC51|Unc51.1|hATG1	unc-51 like autophagy activating kinase 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr12-2074	chr12	133179205	133180205	+	16	1000	TTS (NM_001195520)	TTS (NM_001195520)	7332	NM_001195520	100507055	Hs.282811	NM_001195520	ENSG00000204583	LRCOL1	-	leucine rich colipase like 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr12-2077	chr12	250576	252570	+	32	1994	"non-coding (NR_033859, exon 4 of 10)"	"non-coding (NR_033859, exon 4 of 10)"	6759	NR_033859	574538	Hs.589138	NR_033859	ENSG00000249695	LOC574538	-	uncharacterized LOC574538	ncRNA	32	2.91	10.99656357	6.10E-18
chr12-2094	chr12	1929676	1934802	+	101.8	5126	"intron (NM_001039029, intron 1 of 4)"	"intron (NM_001039029, intron 1 of 4)"	2806	NM_001039029	654429	Hs.585579	NM_001039029	ENSG00000166159	LRTM2	-	leucine rich repeats and transmembrane domains 2	protein-coding	101.77	19.42	5.240473738	6.95E-31
chr12-2095	chr12	1949788	1950788	+	14.1	1000	"intron (NM_172364, intron 25 of 37)"	"intron (NM_172364, intron 25 of 37)"	20855	NM_001039029	654429	Hs.585579	NM_001039029	ENSG00000166159	LRTM2	-	leucine rich repeats and transmembrane domains 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr12-2096	chr12	1953848	1955370	+	22.4	1522	"intron (NM_172364, intron 24 of 37)"	"intron (NM_172364, intron 24 of 37)"	25176	NM_001039029	654429	Hs.585579	NM_001039029	ENSG00000166159	LRTM2	-	leucine rich repeats and transmembrane domains 2	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr12-2098	chr12	1968581	1969581	+	14.7	1000	"intron (NM_172364, intron 19 of 37)"	MIR|SINE|MIR	39648	NM_001039029	654429	Hs.585579	NM_001039029	ENSG00000166159	LRTM2	-	leucine rich repeats and transmembrane domains 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr12-2099	chr12	1982304	1983304	+	14.7	1000	"intron (NM_172364, intron 18 of 37)"	"intron (NM_172364, intron 18 of 37)"	45066	NM_172364	93589	Hs.13768	NM_172364	ENSG00000151062	CACNA2D4	RCD4	calcium voltage-gated channel auxiliary subunit alpha2delta 4	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr12-21	chr12	2257078	2258078	+	26.9	1000	"intron (NM_001129830, intron 3 of 47)"	"intron (NM_001129830, intron 3 of 47)"	75069	NR_046578	100874234	Hs.372570	NR_046578	ENSG00000256025	CACNA1C-AS4	-	CACNA1C antisense RNA 4	ncRNA	26.88	5.82	4.618556701	1.71E-08
chr12-2107	chr12	2249457	2251270	+	30.7	1813	"intron (NM_001129830, intron 3 of 47)"	L2a|LINE|L2	82284	NR_046578	100874234	Hs.372570	NR_046578	ENSG00000256025	CACNA1C-AS4	-	CACNA1C antisense RNA 4	ncRNA	30.72	5.82	5.278350515	1.29E-10
chr12-2109	chr12	2277639	2278639	+	15.4	1000	"intron (NM_001129830, intron 3 of 47)"	"intron (NM_001129830, intron 3 of 47)"	54508	NR_046578	100874234	Hs.372570	NR_046578	ENSG00000256025	CACNA1C-AS4	-	CACNA1C antisense RNA 4	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr12-2111	chr12	2447472	2448472	+	15.4	1000	"intron (NM_001129830, intron 3 of 47)"	"intron (NM_001129830, intron 3 of 47)"	69030	NR_046769	100874370	Hs.653548	NR_046769		CACNA1C-IT3	-	CACNA1C intronic transcript 3	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr12-2113	chr12	2630140	2631140	+	15.4	1000	"intron (NM_001129830, intron 9 of 47)"	"intron (NM_001129830, intron 9 of 47)"	150746	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA	15.36	0.49	31.34693878	1.26E-14
chr12-2116	chr12	2751670	2752670	+	14.7	1000	"intron (NM_001129846, intron 30 of 45)"	"intron (NM_001129846, intron 30 of 45)"	29216	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr12-2117	chr12	2759247	2760247	+	14.1	1000	"intron (NM_001129830, intron 31 of 47)"	"intron (NM_001129830, intron 31 of 47)"	21639	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr12-2120	chr12	3069504	3070504	+	15.4	1000	"intron (NM_201443, intron 1 of 10)"	"intron (NM_201443, intron 1 of 10)"	1256	NM_201443	7004	Hs.94865	NM_003213	ENSG00000197905	TEAD4	EFTR-2|RTEF1|TCF13L1|TEF-3|TEF3|TEFR-1|hRTEF-1B	TEA domain transcription factor 4	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr12-2121	chr12	3126417	3127417	+	12.8	1000	"intron (NM_201443, intron 4 of 10)"	"intron (NM_201443, intron 4 of 10)"	58169	NM_201443	7004	Hs.94865	NM_003213	ENSG00000197905	TEAD4	EFTR-2|RTEF1|TCF13L1|TEF-3|TEF3|TEFR-1|hRTEF-1B	TEA domain transcription factor 4	protein-coding	12.8	0.97	13.19587629	8.12E-09
chr12-2126	chr12	3282353	3283353	+	14.7	1000	"intron (NM_006675, intron 2 of 8)"	AluJr4|SINE|Alu	96332	NM_006675	10867	Hs.504517	NM_006675	ENSG00000011105	TSPAN9	NET-5|NET5|PP1057	tetraspanin 9	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr12-2127	chr12	3331947	3334685	+	43.5	2738	"intron (NM_006675, intron 3 of 8)"	L3b|LINE|CR1	146795	NM_006675	10867	Hs.504517	NM_006675	ENSG00000011105	TSPAN9	NET-5|NET5|PP1057	tetraspanin 9	protein-coding	43.53	7.28	5.979395604	6.36E-16
chr12-2129	chr12	3380829	3382430	+	25	1601	"intron (NM_006675, intron 3 of 8)"	L2a|LINE|L2	-108886	NM_001256536	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr12-2142	chr12	3641797	3642797	+	14.1	1000	"intron (NM_019854, intron 1 of 9)"	"intron (NM_019854, intron 1 of 9)"	-40312	NR_126055	100129223	Hs.586788	NR_126055		THCAT155	-	thyroid cancer-associated transcript 155	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr12-2146	chr12	3987374	3990145	+	41	2771	Intergenic	Tigger1|DNA|TcMar-Tigger	-6145	NM_001286521	57097	Hs.657268	NM_020367	ENSG00000111224	PARP11	ARTD11|C12orf6|MIB006	poly(ADP-ribose) polymerase family member 11	protein-coding	40.97	6.8	6.025	3.54E-15
chr12-2149	chr12	4041364	4042364	+	14.7	1000	Intergenic	L2a|LINE|L2	-59250	NM_001286521	57097	Hs.657268	NM_020367	ENSG00000111224	PARP11	ARTD11|C12orf6|MIB006	poly(ADP-ribose) polymerase family member 11	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr12-2150	chr12	4095169	4096169	+	14.7	1000	Intergenic	AluSc8|SINE|Alu	-113055	NM_001286521	57097	Hs.657268	NM_020367	ENSG00000111224	PARP11	ARTD11|C12orf6|MIB006	poly(ADP-ribose) polymerase family member 11	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr12-2160	chr12	4394191	4397146	+	39	2955	"intron (NM_001759, intron 3 of 4)"	"intron (NM_001759, intron 3 of 4)"	-10318	NR_125790	103752584	Hs.577711	NR_125790	ENSG00000256164	CCND2-AS1	-	CCND2 antisense RNA 1	ncRNA	39.04	8.74	4.466819222	5.52E-11
chr12-2166	chr12	5016783	5017783	+	14.7	1000	Intergenic	Intergenic	-1790	NM_000217	3736	Hs.416139	NM_000217	ENSG00000111262	KCNA1	AEMK|EA1|HBK1|HUK1|KV1.1|MBK1|MK1|RBK1	potassium voltage-gated channel subfamily A member 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr12-2168	chr12	5047846	5048846	+	15.4	1000	Intergenic	L2c|LINE|L2	29273	NM_000217	3736	Hs.416139	NM_000217	ENSG00000111262	KCNA1	AEMK|EA1|HBK1|HUK1|KV1.1|MBK1|MK1|RBK1	potassium voltage-gated channel subfamily A member 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr12-2171	chr12	5070933	5072616	+	25	1683	Intergenic	Intergenic	52701	NM_000217	3736	Hs.416139	NM_000217	ENSG00000111262	KCNA1	AEMK|EA1|HBK1|HUK1|KV1.1|MBK1|MK1|RBK1	potassium voltage-gated channel subfamily A member 1	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr12-2175	chr12	5170149	5171448	+	24.3	1299	Intergenic	Intergenic	17713	NM_002234	3741	Hs.150208	NM_002234	ENSG00000130037	KCNA5	ATFB7|HCK1|HK2|HPCN1|KV1.5|PCN1	potassium voltage-gated channel subfamily A member 5	protein-coding	24.32	5.82	4.178694158	3.56E-07
chr12-2179	chr12	5441507	5442507	+	14.7	1000	Intergenic	Intergenic	-89690	NR_120477	101929584	Hs.436529	NR_120476	ENSG00000256115	LOC101929584	-	uncharacterized LOC101929584	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr12-218	chr12	54587500	54591023	+	57	3523	Intergenic	Intergenic	-6483	NR_045039	23583	Hs.632721	NM_014311	ENSG00000123415	SMUG1	FDG|HMUDG|UNG3	single-strand-selective monofunctional uracil-DNA glycosylase 1	protein-coding	56.97	12.62	4.514263074	1.34E-15
chr12-2185	chr12	5647252	5648556	+	20.5	1304	Intergenic	L2a|LINE|L2	44606	NM_002527	4908	Hs.99171	NM_002527	ENSG00000185652	NTF3	HDNF|NGF-2|NGF2|NT-3|NT3	neurotrophin 3	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr12-2186	chr12	5670595	5671595	+	14.7	1000	TTS (NM_001278597)	TTS (NM_001278597)	67797	NM_002527	4908	Hs.99171	NM_002527	ENSG00000185652	NTF3	HDNF|NGF-2|NGF2|NT-3|NT3	neurotrophin 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr12-2188	chr12	5741250	5742250	+	14.7	1000	"intron (NM_001278596, intron 17 of 25)"	"intron (NM_001278596, intron 17 of 25)"	138452	NM_002527	4908	Hs.99171	NM_002527	ENSG00000185652	NTF3	HDNF|NGF-2|NGF2|NT-3|NT3	neurotrophin 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr12-219	chr12	55039409	55042500	+	60.8	3091	"intron (NM_001300854, intron 1 of 5)"	"intron (NM_001300854, intron 1 of 5)"	1323	NM_001300854	117159	Hs.350570	NM_053283	ENSG00000161634	DCD	AIDD|DCD-1|DSEP|HCAP|PIF	dermcidin	protein-coding	60.81	9.22	6.595444685	6.84E-23
chr12-2195	chr12	6034138	6035138	+	14.1	1000	"intron (NM_001278597, intron 1 of 25)"	"intron (NM_001278597, intron 1 of 25)"	19787	NM_001278596	57101	Hs.148970	NM_020373	ENSG00000047617	ANO2	C12orf3|TMEM16B	anoctamin 2	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr12-2197	chr12	6080081	6085351	+	74.2	5270	"intron (NM_000552, intron 43 of 51)"	"intron (NM_000552, intron 43 of 51)"	-27318	NM_001278597	57101	Hs.148970	NM_020373	ENSG00000047617	ANO2	C12orf3|TMEM16B	anoctamin 2	protein-coding	74.25	13.11	5.663615561	7.18E-25
chr12-2199	chr12	6287599	6288954	+	22.4	1355	Intergenic	Intergenic	-20597	NM_001330312	928	Hs.114286	NM_001769	ENSG00000010278	CD9	BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29	CD9 molecule	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr12-2201	chr12	6489528	6493623	+	61.4	4095	"intron (NM_001270987, intron 1 of 9)"	"intron (NM_001270987, intron 1 of 9)"	-1624	NM_002342	4055	Hs.1116	NM_002342	ENSG00000111321	LTBR	CD18|D12S370|LT-BETA-R|TNF-R-III|TNFCR|TNFR-RP|TNFR2-RP|TNFR3|TNFRSF3	lymphotoxin beta receptor	protein-coding	61.45	11.16	5.506272401	2.24E-20
chr12-2206	chr12	7174872	7175872	+	15.4	1000	"intron (NM_001734, intron 10 of 11)"	"intron (NM_001734, intron 10 of 11)"	7407	NM_001346850	716	Hs.458355	NM_001734	ENSG00000182326	C1S	EDSPD2	complement C1s	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr12-2214	chr12	12192133	12193133	+	14.7	1000	Intergenic	Intergenic	-31245	NM_138723	79370	Hs.210343	NM_030766	ENSG00000121380	BCL2L14	BCLG	BCL2 like 14	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr12-2216	chr12	12246958	12247958	+	15.4	1000	"exon (NM_030766, exon 5 of 6)"	"exon (NM_030766, exon 5 of 6)"	-17428	NR_036262	100422885		NR_036262	ENSG00000283498	MIR1244-2	-	microRNA 1244-2	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr12-2222	chr12	13428027	13429027	+	14.7	1000	Intergenic	Intergenic	78925	NM_001423	2012	Hs.719042	NM_001423	ENSG00000134531	EMP1	CL-20|EMP-1|TMP	epithelial membrane protein 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr12-2224	chr12	14340479	14341479	+	14.1	1000	Intergenic	LTR81B|LTR|Gypsy	-177587	NM_018179	55729	Hs.504856	NM_018179	ENSG00000171681	ATF7IP	AM|ATF-IP|MCAF|MCAF1|p621	activating transcription factor 7 interacting protein	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr12-2238	chr12	24911433	24912698	+	17.9	1265	Intergenic	Intergenic	143257	NM_001178094	586	Hs.438993	NM_005504	ENSG00000060982	BCAT1	BCATC|BCT1|ECA39|MECA39|PNAS121|PP18	branched chain amino acid transaminase 1	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr12-2239	chr12	25808306	25809306	+	14.7	1000	Intergenic	Intergenic	-7310	NM_001145727	160492	Hs.44647	NM_152590	ENSG00000152936	LMNTD1	IFLTD1|LMNARS1|PAS1C1	lamin tail domain containing 1	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr12-224	chr12	71833641	71835495	+	41	1854	"intron (NM_003667, intron 1 of 17)"	"intron (NM_003667, intron 1 of 17)"	1018	NM_001277226	8549	Hs.658889	NM_003667	ENSG00000139292	LGR5	FEX|GPR49|GPR67|GRP49|HG38	leucine rich repeat containing G protein-coupled receptor 5	protein-coding	40.97	4.85	8.44742268	3.22E-19
chr12-2247	chr12	29661126	29662126	+	15.4	1000	"intron (NM_175861, intron 17 of 17)"	AluSx|SINE|Alu	-11007	NM_183378	341350	Hs.674588	NM_183378	ENSG00000187950	OVCH1	OVCH	ovochymase 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr12-2249	chr12	31114586	31115586	+	15.4	1000	"intron (NM_001080509, intron 2 of 7)"	MER104|DNA|TcMar-Tc2	35248	NM_001080509	441631	Hs.505141	NM_001080509	ENSG00000110900	TSPAN11	VSSW1971	tetraspanin 11	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr12-225	chr12	88973911	88975188	+	23	1277	promoter-TSS (NM_000899)	promoter-TSS (NM_000899)	-299	NM_000899	4254	Hs.1048	NM_000899	ENSG00000049130	KITLG	DCUA|DFNA69|FPH2|FPHH|KL-1|Kitl|MGF|SCF|SF|SHEP7	KIT ligand	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr12-2253	chr12	31631673	31632673	+	14.7	1000	"intron (NM_144973, intron 3 of 20)"	"intron (NM_144973, intron 3 of 20)"	-110684	NR_046909	100874249	Hs.627628	NR_046909	ENSG00000255867	DENND5B-AS1	-	DENND5B antisense RNA 1	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr12-2257	chr12	32628252	32629252	+	14.7	1000	Intergenic	MLT1H2-int|LTR|ERVL-MaLR	-10154	NM_001330374	121512	Hs.117835	NM_139241	ENSG00000139132	FGD4	CMT4H|FRABP|ZFYVE6	"FYVE, RhoGEF and PH domain containing 4"	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr12-2259	chr12	33034273	33035273	+	14.1	1000	"intron (NM_001005242, intron 1 of 12)"	"intron (NM_001005242, intron 1 of 12)"	15007	NM_004572	5318	Hs.164384	NM_004572	ENSG00000057294	PKP2	ARVD9	plakophilin 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr12-226	chr12	113920734	113922272	+	27.5	1538	Intergenic	Intergenic	-11626	NM_022363	64211	Hs.302029	NM_022363	ENSG00000089116	LHX5	-	LIM homeobox 5	protein-coding	27.52	5.34	5.153558052	3.94E-09
chr12-2261	chr12	41898511	41899511	+	15.4	1000	"intron (NM_013377, intron 1 of 7)"	"intron (NM_013377, intron 1 of 7)"	67470	NM_013377	29951	Hs.380044	NM_013377	ENSG00000165966	PDZRN4	LNX4|SAMCAP3L	PDZ domain containing ring finger 4	protein-coding	15.36	0	15.82260557	1.26E-14
chr12-2262	chr12	41940019	41941315	+	17.9	1296	"intron (NM_013377, intron 3 of 7)"	L2|LINE|L2	109126	NM_013377	29951	Hs.380044	NM_013377	ENSG00000165966	PDZRN4	LNX4|SAMCAP3L	PDZ domain containing ring finger 4	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr12-2264	chr12	42389338	42390338	+	15.4	1000	Intergenic	Intergenic	148835	NM_001099650	283464	Hs.259347	NM_173601	ENSG00000151233	GXYLT1	GLT8D3	glucoside xylosyltransferase 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr12-2267	chr12	44206544	44207819	+	23.7	1275	Intergenic	AluSx1|SINE|Alu	-7003	NR_073473	5756	Hs.189075	NM_002822	ENSG00000151239	TWF1	A6|PTK9	twinfilin actin binding protein 1	protein-coding	23.68	3.4	6.964705882	5.45E-10
chr12-2268	chr12	44219537	44220537	+	15.4	1000	Intergenic	Intergenic	-9627	NM_001286211	84216	Hs.444668	NM_032256	ENSG00000139173	TMEM117	-	transmembrane protein 117	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr12-2269	chr12	45144070	45145070	+	14.1	1000	"intron (NM_001145110, intron 10 of 20)"	"intron (NM_001145110, intron 10 of 20)"	124874	NM_001145109	4753	Hs.505326	NM_006159	ENSG00000184613	NELL2	NRP2	neural EGFL like 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr12-2271	chr12	47471661	47473064	+	21.8	1403	"exon (NM_001143668, exon 3 of 3)"	"exon (NM_001143668, exon 3 of 3)"	-1024	NM_001281429	91523	Hs.560100	NM_138371	ENSG00000179715	PCED1B	FAM113B	PC-esterase domain containing 1B	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr12-2272	chr12	47862657	47863657	+	14.7	1000	Intergenic	Intergenic	-105105	NR_039715	100616478		NR_039715	ENSG00000264906	MIR4494	-	microRNA 4494	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr12-2273	chr12	48237265	48239982	+	40.3	2717	"exon (NM_000376, exon 10 of 10)"	"exon (NM_000376, exon 10 of 10)"	-24860	NM_001308090	51564	Hs.200063	NM_015401	ENSG00000061273	HDAC7	HD7|HD7A|HDAC7A	histone deacetylase 7	protein-coding	40.33	6.8	5.930882353	2.14E-14
chr12-2275	chr12	48252572	48253572	+	14.7	1000	"intron (NM_001017536, intron 4 of 9)"	"intron (NM_001017536, intron 4 of 9)"	-39309	NM_001308090	51564	Hs.200063	NM_015401	ENSG00000061273	HDAC7	HD7|HD7A|HDAC7A	histone deacetylase 7	protein-coding	14.72	0	15.16333034	3.99E-13
chr12-2283	chr12	48924165	48925440	+	17.3	1275	Intergenic	Intergenic	5387	NM_001005203	341568	Hs.524373	NM_001005203	ENSG00000197376	OR8S1	-	olfactory receptor family 8 subfamily S member 1	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr12-229	chr12	121036900	121040933	+	69.8	4033	Intergenic	Intergenic	-19715	NM_198202	51367	Hs.279913	NM_015918	ENSG00000167272	POP5	HSPC004|RPP2|RPP20|hPop5	"POP5 homolog, ribonuclease P/MRP subunit"	protein-coding	69.77	10.68	6.532771536	6.80E-26
chr12-2292	chr12	49930803	49932492	+	34.6	1689	Intergenic	CpG	-1293	NM_012284	23416	Hs.64064	NM_012284	ENSG00000135519	KCNH3	BEC1|ELK2|Kv12.2	potassium voltage-gated channel subfamily H member 3	protein-coding	34.56	3.88	8.907216495	5.09E-17
chr12-2293	chr12	50257886	50258886	+	14.7	1000	Intergenic	Intergenic	-21474	NM_181708	144233	Hs.142736	NM_181708	ENSG00000186666	BCDIN3D	-	BCDIN3 domain containing RNA methyltransferase	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr12-2295	chr12	50289936	50291775	+	28.2	1839	"exon (NM_012306, exon 5 of 12)"	"exon (NM_012306, exon 5 of 12)"	6905	NM_012306	23017	Hs.567424	NM_012306	ENSG00000135472	FAIM2	LFG|LFG2|NGP35|NMP35|TMBIM2	Fas apoptotic inhibitory molecule 2	protein-coding	28.16	6.8	4.141176471	5.07E-08
chr12-2297	chr12	50305060	50306060	+	15.4	1000	promoter-TSS (NR_026948)	promoter-TSS (NR_026948)	86	NR_026948	283332	Hs.127688	NR_026948	ENSG00000258135	LOC283332	-	uncharacterized LOC283332	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr12-2299	chr12	50676129	50677129	+	15.4	1000	"intron (NM_001113546, intron 1 of 10)"	"intron (NM_001113546, intron 1 of 10)"	724	NM_001113546	51474	Hs.525419	NM_016357	ENSG00000050405	LIMA1	EPLIN|SREBP3	LIM domain and actin binding 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr12-2300	chr12	52231183	52234469	+	39.7	3286	Intergenic	Intergenic	-7125	NM_001013690	401720	Hs.648218	NM_001013690		FIGNL2	-	fidgetin like 2	protein-coding	39.69	4.85	8.183505155	2.73E-18
chr12-2302	chr12	52257189	52258189	+	15.4	1000	Intergenic	Intergenic	15682	NR_135803	105369971	Hs.505582	NR_135803	ENSG00000259887	LOC105369971	-	uncharacterized LOC105369971	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr12-2309	chr12	52701087	52703409	+	39.7	2322	"exon (NM_001320198, exon 11 of 11)"	"exon (NM_001320198, exon 11 of 11)"	12934	NM_002282	3889	Hs.720768	NM_002282	ENSG00000170523	KRT83	HB3|Hb-3|KRTHB3	keratin 83	protein-coding	39.69	8.25	4.810909091	2.95E-12
chr12-2311	chr12	52705967	52709123	+	42.9	3156	TTS (NM_002282)	TTS (NM_002282)	7637	NM_002282	3889	Hs.720768	NM_002282	ENSG00000170523	KRT83	HB3|Hb-3|KRTHB3	keratin 83	protein-coding	42.89	7.77	5.51994852	2.23E-14
chr12-2329	chr12	52963974	52964974	+	14.1	1000	"exon (NM_175053, exon 5 of 9)"	"exon (NM_175053, exon 5 of 9)"	3135	NM_175053	121391	Hs.660125	NM_175053	ENSG00000170484	KRT74	ADWH|HTSS2|HYPT3|K6IRS4|KRT5C|KRT6IRS4	keratin 74	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr12-2331	chr12	53335848	53339569	+	56.3	3721	"intron (NM_001256293, intron 1 of 8)"	"intron (NM_001256293, intron 1 of 8)"	-4947	NM_199187	3875	Hs.406013	NM_000224	ENSG00000111057	KRT18	CK-18|CYK18|K18	keratin 18	protein-coding	56.33	13.59	4.144959529	1.67E-14
chr12-2333	chr12	53376910	53379666	+	36.5	2756	Intergenic	Intergenic	-21754	NM_001417	1975	Hs.648394	NM_001417	ENSG00000063046	EIF4B	EIF-4B|PRO1843	eukaryotic translation initiation factor 4B	protein-coding	36.48	7.77	4.694980695	8.02E-11
chr12-2335	chr12	53479397	53480397	+	13.4	1000	Intergenic	MIRc|SINE|MIR	-6693	NM_032840	84926	Hs.343334	NM_032840	ENSG00000167778	SPRYD3	-	SPRY domain containing 3	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr12-2336	chr12	53633203	53634203	+	15.4	1000	Intergenic	AluJo|SINE|Alu	-7663	NM_001243730	5916	Hs.1497	NM_000966	ENSG00000172819	RARG	NR1B3|RARC	retinoic acid receptor gamma	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr12-234	chr12	132962191	132963191	+	19.8	1000	Intergenic	Intergenic	56255	NR_120467	101928416		NR_120467	ENSG00000255916	LOC101928416	-	uncharacterized LOC101928416	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr12-2341	chr12	54133083	54134788	+	22.4	1705	Intergenic	Intergenic	11684	NR_104333	102216268	Hs.742074	NR_104332	ENSG00000260492	CISTR	CISTR-ACT|CISTRACT|re52431	chondrogenesis-associated transcript	ncRNA	22.4	3.88	5.773195876	2.53E-08
chr12-2344	chr12	54197624	54198624	+	14.1	1000	Intergenic	MIRc|SINE|MIR	-47306	NR_104332	102216268	Hs.742074	NR_104332	ENSG00000260492	CISTR	CISTR-ACT|CISTRACT|re52431	chondrogenesis-associated transcript	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr12-236	chr12	3136150	3138503	+	39.7	2353	"intron (NM_201443, intron 8 of 10)"	L1MB8|LINE|L1	-49195	NM_001168320	10867	Hs.504517	NM_006675	ENSG00000011105	TSPAN9	NET-5|NET5|PP1057	tetraspanin 9	protein-coding	39.69	6.8	5.836764706	2.14E-14
chr12-2360	chr12	54520476	54527256	+	101.8	6780	"intron (NR_026656, intron 1 of 1)"	AluSz|SINE|Alu	4011	NR_026656	400043	Hs.19193	NR_026656	ENSG00000250742	LOC400043	-	uncharacterized LOC400043	ncRNA	101.77	17.47	5.825414997	7.52E-34
chr12-2365	chr12	55003531	55004792	+	18.6	1261	promoter-TSS (NR_003039)	promoter-TSS (NR_003039)	85	NR_003039	644076	Hs.483519	NR_003039	ENSG00000257780	GLYCAM1	-	glycosylation dependent cell adhesion molecule 1 (pseudogene)	pseudo	18.56	2.91	6.378006873	1.38E-07
chr12-2373	chr12	57344404	57345404	+	14.1	1000	TTS (NM_001320108)	TTS (NM_001320108)	8254	NM_001320108	8608	Hs.134958	NM_003708	ENSG00000139547	RDH16	RODH-4|SDR9C8	retinol dehydrogenase 16 (all-trans)	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr12-2376	chr12	57588659	57590104	+	19.2	1445	"intron (NM_002332, intron 52 of 88)"	"intron (NM_002332, intron 52 of 88)"	1094	NR_031597	100302201		NR_031597	ENSG00000221365	MIR1228	MIRN1228|hsa-mir-1228|mir-1228	microRNA 1228	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr12-2382	chr12	57618251	57619751	+	19.8	1500	"exon (NM_007224, exon 2 of 2)"	"exon (NM_007224, exon 2 of 2)"	-4355	NM_005412	6472	Hs.741179	NM_005412	ENSG00000182199	SHMT2	GLYA|HEL-S-51e|SHMT	serine hydroxymethyltransferase 2	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr12-2388	chr12	58549551	58550551	+	14.7	1000	Intergenic	MLT2B1|LTR|ERVL	68376	NR_135022	105369785	Hs.539353	NR_135022	ENSG00000257541	LOC105369785	-	uncharacterized LOC105369785	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr12-2390	chr12	64716864	64717864	+	15.4	1000	"intron (NM_001170633, intron 3 of 12)"	AluJb|SINE|Alu	66981	NM_001170633	115749	Hs.535190	NM_001099676	ENSG00000185306	C12orf56	-	chromosome 12 open reading frame 56	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr12-2392	chr12	64776265	64778370	+	32	2105	"intron (NM_001170633, intron 1 of 12)"	AluSg|SINE|Alu	7028	NM_001170633	115749	Hs.535190	NM_001099676	ENSG00000185306	C12orf56	-	chromosome 12 open reading frame 56	protein-coding	32	6.31	5.071315372	1.20E-10
chr12-2395	chr12	66276055	66277055	+	15.4	1000	promoter-TSS (NM_001292024)	promoter-TSS (NM_001292024)	-608	NM_001292024	100129940	Hs.685856	NM_001292023	ENSG00000197301	LOC100129940	-	uncharacterized LOC100129940	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr12-2396	chr12	66293788	66294788	+	15.4	1000	"intron (NM_001300918, intron 3 of 4)"	"intron (NM_001300918, intron 3 of 4)"	-18341	NM_001292024	100129940	Hs.685856	NM_001292023	ENSG00000197301	LOC100129940	-	uncharacterized LOC100129940	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr12-2405	chr12	67997321	67998321	+	14.1	1000	Intergenic	Intergenic	-44691	NM_006482	8445	Hs.173135	NM_003583	ENSG00000127334	DYRK2	-	dual specificity tyrosine phosphorylation regulated kinase 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr12-2422	chr12	69471137	69472137	+	14.7	1000	Intergenic	MSTB|LTR|ERVL-MaLR	-114617	NM_001874	1368	Hs.654387	NM_001874	ENSG00000135678	CPM	-	carboxypeptidase M	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr12-2424	chr12	70082194	70083909	+	23.7	1715	promoter-TSS (NM_152439)	promoter-TSS (NM_152439)	6	NM_152439	144453	Hs.280782	NM_032735	ENSG00000127325	BEST3	VMD2L3	bestrophin 3	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr12-2426	chr12	76326216	76327216	+	14.7	1000	Intergenic	Intergenic	98840	NM_007350	22822	Hs.602085	NM_007350	ENSG00000139289	PHLDA1	DT1P1B11|PHRIP|TDAG51	pleckstrin homology like domain family A member 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr12-2427	chr12	77779233	77780233	+	15.4	1000	Intergenic	UCON29|DNA|PiggyBac?	-320373	NM_203394	144455	Hs.416375	NM_203394	ENSG00000165891	E2F7	-	E2F transcription factor 7	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr12-2430	chr12	85304827	85305827	+	14.1	1000	"intron (NM_182767, intron 1 of 11)"	CpG	1281	NM_018057	55117	Hs.44424	NM_018057	ENSG00000072041	SLC6A15	NTT73|SBAT1|V7-3|hv7-3	solute carrier family 6 member 15	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr12-2432	chr12	93595228	93596228	+	14.1	1000	"intron (NR_040096, intron 3 of 4)"	L2a|LINE|L2	27586	NR_120492	102724933	Hs.663947	NR_120492	ENSG00000258171	LOC102724933	-	uncharacterized LOC102724933	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr12-2435	chr12	94556980	94557980	+	15.4	1000	"intron (NM_005761, intron 1 of 30)"	"intron (NM_005761, intron 1 of 30)"	14981	NM_005761	10154	Hs.584845	NM_005761	ENSG00000136040	PLXNC1	CD232|PLXN-C1|VESPR	plexin C1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr12-2441	chr12	95083751	95084751	+	14.7	1000	Intergenic	Intergenic	-39913	NM_020698	57458	Hs.370410	NM_020698	ENSG00000057704	TMCC3	-	transmembrane and coiled-coil domain family 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr12-2442	chr12	96181946	96186653	+	70.4	4707	promoter-TSS (NM_001329702)	promoter-TSS (NM_001329702)	237	NM_021229	59277	Hs.201034	NM_021229	ENSG00000074527	NTN4	PRO3091	netrin 4	protein-coding	70.41	15.53	4.533805538	2.24E-19
chr12-2446	chr12	97454641	97456088	+	16	1447	Intergenic	Intergenic	154120	NM_001135175	121441	Hs.270084	NM_152905	ENSG00000139350	NEDD1	GCP-WD|TUBGCP7	"neural precursor cell expressed, developmentally down-regulated 1"	protein-coding	16	2.91	5.498281787	4.98E-06
chr12-2448	chr12	97699865	97700865	+	14.7	1000	Intergenic	Intergenic	-158434	NR_024037	196475	Hs.652568	NR_024037	ENSG00000255794	RMST	LINC00054|NCRMS|NCRNA00054	rhabdomyosarcoma 2 associated transcript (non-protein coding)	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr12-2450	chr12	100142161	100143161	+	15.4	1000	"intron (NM_152788, intron 8 of 25)"	"intron (NM_152788, intron 8 of 25)"	101133	NM_153364	196472	Hs.591011	NM_153364	ENSG00000180219	FAM71C	-	family with sequence similarity 71 member C	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr12-2452	chr12	100260777	100261777	+	15.4	1000	"intron (NM_152788, intron 1 of 25)"	THE1B|LTR|ERVL-MaLR	117155	NM_152788	56899	Hs.506458	NM_020140	ENSG00000185046	ANKS1B	AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr12-2454	chr12	102289253	102290253	+	15.4	1000	"intron (NM_018370, intron 1 of 6)"	AluSx1|SINE|Alu	18648	NM_018370	55332	Hs.525634	NM_018370	ENSG00000136048	DRAM1	DRAM	DNA damage regulated autophagy modulator 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr12-2455	chr12	102987848	102988848	+	15.4	1000	Intergenic	AluSx1|SINE|Alu	-113925	NM_001111283	3479	Hs.160562	NM_000618	ENSG00000017427	IGF1	IGF-I|IGFI|MGF	insulin like growth factor 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr12-2456	chr12	103145930	103146930	+	14.7	1000	Intergenic	Intergenic	71747	NR_033855	283432	Hs.382110	NR_033855	ENSG00000258169	LINC00485	-	long intergenic non-protein coding RNA 485	ncRNA	14.72	0	15.16333034	3.99E-13
chr12-2459	chr12	103951205	103952205	+	16	1000	"non-coding (NR_110103, exon 5 of 5)"	"non-coding (NR_110103, exon 5 of 5)"	10133	NR_110103	101929084	Hs.440981	NR_110103	ENSG00000257762	LOC101929084	-	uncharacterized LOC101929084	ncRNA	16	2.43	6.58436214	7.90E-07
chr12-246	chr12	6169291	6170291	+	21.1	1000	"intron (NM_000552, intron 13 of 51)"	"intron (NM_000552, intron 13 of 51)"	64050	NM_000552	7450	Hs.440848	NM_000552	ENSG00000110799	VWF	F8VWF|VWD	von Willebrand factor	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr12-2461	chr12	104055884	104056884	+	14.1	1000	"intron (NM_017564, intron 17 of 68)"	"intron (NM_017564, intron 17 of 68)"	75315	NM_017564	55576	Hs.408249	NM_017564	ENSG00000136011	STAB2	FEEL2|FELE-2|FELL2|FEX2|HARE|SCARH1	stabilin 2	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr12-2465	chr12	105857174	105858174	+	15.4	1000	Intergenic	AluJb|SINE|Alu	133260	NM_001145199	387882	Hs.368938	NM_207376	ENSG00000235162	C12orf75	AGD3|OCC-1|OCC1	chromosome 12 open reading frame 75	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr12-2467	chr12	105982099	105983099	+	14.1	1000	Intergenic	L1M5|LINE|L1	-115382	NR_110108	101929110	Hs.145944	NR_110108	ENSG00000257859	CASC18	-	cancer susceptibility candidate 18 (non-protein coding)	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr12-247	chr12	6307259	6311058	+	74.2	3799	promoter-TSS (NM_001769)	promoter-TSS (NM_001769)	285	NM_001330312	928	Hs.114286	NM_001769	ENSG00000010278	CD9	BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29	CD9 molecule	protein-coding	74.25	13.59	5.463576159	4.08E-24
chr12-2473	chr12	106483739	106486468	+	38.4	2729	"intron (NM_014840, intron 2 of 6)"	"intron (NM_014840, intron 2 of 6)"	48708	NM_014840	9891	Hs.524692	NM_014840	ENSG00000074590	NUAK1	ARK5	NUAK family kinase 1	protein-coding	38.4	6.8	5.647058824	1.26E-13
chr12-2474	chr12	106502367	106503367	+	15.4	1000	"intron (NM_014840, intron 1 of 6)"	"intron (NM_014840, intron 1 of 6)"	30944	NM_014840	9891	Hs.524692	NM_014840	ENSG00000074590	NUAK1	ARK5	NUAK family kinase 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr12-2480	chr12	108297108	108298108	+	14.1	1000	promoter-TSS (NR_037629)	promoter-TSS (NR_037629)	-60	NR_037629	728739	Hs.741995	NR_037629		LOC728739	-	programmed cell death 2 pseudogene	pseudo	14.08	0.97	14.51546392	5.60E-10
chr12-2485	chr12	108531976	108532976	+	14.1	1000	"intron (NM_001304447, intron 1 of 9)"	"intron (NM_001304447, intron 1 of 9)"	6968	NM_001304447	9671	Hs.143591	NM_014653	ENSG00000075035	WSCD2	-	WSC domain containing 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr12-2488	chr12	109591136	109592136	+	13.4	1000	"intron (NM_001093, intron 1 of 51)"	AluSz|SINE|Alu	14434	NM_001093	32	Hs.234898	NM_001093	ENSG00000076555	ACACB	ACC2|ACCB|HACC275	acetyl-CoA carboxylase beta	protein-coding	13.44	2.43	5.530864198	2.99E-05
chr12-2489	chr12	109712924	109713924	+	15.4	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	33601	NM_213596	121643	Hs.528316	NM_213596	ENSG00000139445	FOXN4	-	forkhead box N4	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr12-2492	chr12	110054690	110055690	+	14.1	1000	Intergenic	Intergenic	43690	NM_001114185	4598	Hs.130607	NM_000431	ENSG00000110921	MVK	LRBP|MK|MVLK|POROK3	mevalonate kinase	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr12-2493	chr12	110137574	110138574	+	14.7	1000	Intergenic	AluSx|SINE|Alu	-14113	NM_032829	84915	Hs.661785	NM_032829	ENSG00000139438	FAM222A	C12orf34	family with sequence similarity 222 member A	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr12-2495	chr12	110152028	110154517	+	35.8	2489	"intron (NM_032829, intron 1 of 2)"	"intron (NM_032829, intron 1 of 2)"	1085	NM_032829	84915	Hs.661785	NM_032829	ENSG00000139438	FAM222A	C12orf34	family with sequence similarity 222 member A	protein-coding	35.84	4.85	7.389690722	1.37E-15
chr12-250	chr12	44228833	44231208	+	47.4	2375	"intron (NM_032256, intron 1 of 7)"	CpG	356	NM_001286213	84216	Hs.444668	NM_032256	ENSG00000139173	TMEM117	-	transmembrane protein 117	protein-coding	47.37	8.74	5.419908467	6.98E-16
chr12-2500	chr12	111359042	111360042	+	15.4	1000	Intergenic	MIRb|SINE|MIR	-1138	NM_000432	4633	Hs.75535	NM_000432	ENSG00000111245	MYL2	CMH10|MLC-2s/v|MLC2	myosin light chain 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr12-2501	chr12	111363087	111364576	+	23	1489	Intergenic	L1M6|LINE|L1	-5427	NM_000432	4633	Hs.75535	NM_000432	ENSG00000111245	MYL2	CMH10|MLC-2s/v|MLC2	myosin light chain 2	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr12-2502	chr12	111380213	111381213	+	14.7	1000	Intergenic	Intergenic	6307	NR_036513	100131138	Hs.152129	NR_036513	ENSG00000185847	LINC01405	-	long intergenic non-protein coding RNA 1405	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr12-2506	chr12	111510535	111511535	+	14.7	1000	"intron (NM_015267, intron 1 of 21)"	L1ME3A|LINE|L1	39207	NM_015267	23316	Hs.124953	NM_015267	ENSG00000111249	CUX2	CDP2|CUTL2	cut like homeobox 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr12-2507	chr12	111556451	111559675	+	42.9	3224	"intron (NM_015267, intron 1 of 21)"	L2a|LINE|L2	86235	NM_015267	23316	Hs.124953	NM_015267	ENSG00000111249	CUX2	CDP2|CUTL2	cut like homeobox 2	protein-coding	42.89	9.71	4.417095778	8.16E-12
chr12-2509	chr12	111607673	111608673	+	15.4	1000	"intron (NM_015267, intron 1 of 21)"	AluSp|SINE|Alu	-133773	NR_106818	102465455		NR_106818	ENSG00000273700	MIR6760	hsa-mir-6760	microRNA 6760	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr12-2513	chr12	113112096	113114447	+	37.1	2351	"intron (NM_001347952, intron 1 of 21)"	MIRb|SINE|MIR	19710	NR_031631	100302227		NR_031631	ENSG00000283507	MIR1302-1	MIRN1302-1|hsa-mir-1302-1	microRNA 1302-1	ncRNA	37.12	7.77	4.777348777	1.66E-11
chr12-2515	chr12	113907810	113909065	+	19.8	1255	"intron (NM_022363, intron 1 of 4)"	MIR3|SINE|MIR	-1371	NR_126425	104355219	Hs.641707	NR_126425		LHX5-AS1	locus 4010|locus4010	LHX5 antisense RNA 1 (head to head)	ncRNA	19.84	3.88	5.113402062	7.67E-07
chr12-2516	chr12	113911139	113913614	+	43.5	2475	"intron (NR_126425, intron 1 of 1)"	"intron (NR_126425, intron 1 of 1)"	-2499	NM_022363	64211	Hs.302029	NM_022363	ENSG00000089116	LHX5	-	LIM homeobox 5	protein-coding	43.53	2.91	14.95876289	5.10E-28
chr12-2522	chr12	114939532	114940821	+	23	1289	Intergenic	Intergenic	-93929	NM_000192	6910	Hs.381715	NM_000192	ENSG00000089225	TBX5	HOS	T-box 5	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr12-2525	chr12	115657357	115658357	+	14.7	1000	Intergenic	Intergenic	-535888	NM_005996	6926	Hs.744016	NM_005996	ENSG00000135111	TBX3	TBX3-ISO|UMS|XHL	T-box 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr12-2526	chr12	116109814	116110814	+	15.4	1000	Intergenic	L2b|LINE|L2	476145	NR_030351	693205		NR_030351	ENSG00000207967	MIR620	MIRN620|hsa-mir-620	microRNA 620	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr12-2527	chr12	116194875	116195875	+	14.1	1000	Intergenic	Intergenic	391084	NR_030351	693205		NR_030351	ENSG00000207967	MIR620	MIRN620|hsa-mir-620	microRNA 620	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr12-2529	chr12	116254390	116255390	+	12.8	1000	Intergenic	L2b|LINE|L2	331569	NR_030351	693205		NR_030351	ENSG00000207967	MIR620	MIRN620|hsa-mir-620	microRNA 620	ncRNA	12.8	1.94	6.597938144	4.51E-06
chr12-2531	chr12	117315230	117321302	+	97.9	6072	"intron (NR_073189, intron 1 of 4)"	"intron (NR_073189, intron 1 of 4)"	966	NR_073189	8739	Hs.87247	NM_003806	ENSG00000135116	HRK	DP5|HARAKIRI	"harakiri, BCL2 interacting protein"	protein-coding	97.93	20.39	4.802844532	1.85E-27
chr12-2534	chr12	117769665	117770665	+	15.4	1000	"intron (NM_001204218, intron 1 of 29)"	MIRb|SINE|MIR	-22950	NM_001204214	4842	Hs.654410	NM_000620	ENSG00000089250	NOS1	IHPS1|N-NOS|NC-NOS|NOS|bNOS|nNOS	nitric oxide synthase 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr12-2536	chr12	118124036	118125036	+	14.1	1000	"intron (NM_173598, intron 4 of 19)"	"intron (NM_173598, intron 4 of 19)"	281492	NM_173598	283455	Hs.375836	NM_173598	ENSG00000171435	KSR2	-	kinase suppressor of ras 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr12-2537	chr12	118273968	118274968	+	14.7	1000	"intron (NM_173598, intron 3 of 19)"	"intron (NM_173598, intron 3 of 19)"	131560	NM_173598	283455	Hs.375836	NM_173598	ENSG00000171435	KSR2	-	kinase suppressor of ras 2	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr12-2538	chr12	118889398	118890398	+	14.7	1000	Intergenic	Intergenic	75540	NM_022491	64426	Hs.416630	NM_022491	ENSG00000111707	SUDS3	SAP45|SDS3	"SDS3 homolog, SIN3A corepressor complex component"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr12-2541	chr12	119731317	119732317	+	14.1	1000	"intron (NR_024246, intron 2 of 3)"	L2c|LINE|L2	9368	NR_024246	144742	Hs.524782	NR_024246	ENSG00000281196	LINC00934	-	long intergenic non-protein coding RNA 934	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr12-2543	chr12	120759555	120760555	+	14.7	1000	"exon (NM_000928, exon 4 of 4)"	"exon (NM_000928, exon 4 of 4)"	5537	NM_000928	5319	Hs.992	NM_000928	ENSG00000170890	PLA2G1B	PLA2|PLA2A|PPLA2	phospholipase A2 group IB	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr12-2546	chr12	121078056	121082587	+	71.7	4531	"intron (NM_001033677, intron 1 of 5)"	"intron (NM_001033677, intron 1 of 5)"	1899	NM_001033677	9478	Hs.458482	NM_004276	ENSG00000157782	CABP1	CALBRAIN|HCALB_BR	calcium binding protein 1	protein-coding	71.69	9.22	7.775488069	1.26E-30
chr12-2547	chr12	124582870	124584182	+	16.6	1312	"intron (NM_001204299, intron 2 of 4)"	"intron (NM_001204299, intron 2 of 4)"	125764	NM_152437	144348	Hs.524828	NM_152437	ENSG00000179195	ZNF664	ZFOC1|ZNF176	zinc finger protein 664	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr12-2549	chr12	124732509	124733509	+	15.4	1000	"intron (NM_001204299, intron 3 of 4)"	AluSx1|SINE|Alu	-40701	NM_181709	144347	Hs.432901	NM_181709	ENSG00000178882	RFLNA	CFM2|FAM101A	refilin A	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr12-2556	chr12	125678287	125679287	+	14.7	1000	Intergenic	Intergenic	128874	NM_001319839	65985	Hs.656073	NM_023928	ENSG00000081760	AACS	ACSF1|SUR-5	acetoacetyl-CoA synthetase	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr12-2559	chr12	125728656	125731750	+	42.2	3094	Intergenic	Intergenic	-80959	NM_052907	114795	Hs.524838	NM_052907	ENSG00000139364	TMEM132B	-	transmembrane protein 132B	protein-coding	42.25	4.85	8.711340206	3.69E-20
chr12-2560	chr12	125735826	125738548	+	36.5	2722	Intergenic	Intergenic	-73975	NM_052907	114795	Hs.524838	NM_052907	ENSG00000139364	TMEM132B	-	transmembrane protein 132B	protein-coding	36.48	6.8	5.364705882	3.95E-12
chr12-2564	chr12	126020783	126021783	+	15.4	1000	"intron (NM_052907, intron 4 of 8)"	MLT1D|LTR|ERVL-MaLR	-85715	NM_001286219	114795	Hs.524838	NM_052907	ENSG00000139364	TMEM132B	-	transmembrane protein 132B	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr12-2565	chr12	126196249	126197249	+	14.7	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	89751	NM_001286219	114795	Hs.524838	NM_052907	ENSG00000139364	TMEM132B	-	transmembrane protein 132B	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr12-2566	chr12	126860294	126861294	+	14.7	1000	Intergenic	MLT1A0|LTR|ERVL-MaLR	-66233	NR_130748	100128554	Hs.408255	NR_015398	ENSG00000214043	LOC100128554	-	uncharacterized LOC100128554	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr12-2568	chr12	128629236	128630236	+	14.1	1000	Intergenic	Intergenic	26974	NR_104648	101927694	Hs.524849	NR_104648	ENSG00000256659	LOC101927694	-	uncharacterized LOC101927694	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr12-257	chr12	54088226	54091527	+	59.5	3301	Intergenic	L3b|LINE|CR1	-19364	NM_001002031	517	Hs.524464	NM_005176	ENSG00000135390	ATP5G2	ATP5A	"ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9)"	protein-coding	59.53	10.68	5.573970037	1.25E-19
chr12-2570	chr12	128801069	128802069	+	14.7	1000	"intron (NM_001136103, intron 1 of 8)"	"intron (NM_001136103, intron 1 of 8)"	22932	NR_037406	100500817		NR_037406	ENSG00000265635	MIR3612	-	microRNA 3612	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr12-2571	chr12	128884352	128885940	+	23	1588	"intron (NM_001136103, intron 1 of 8)"	AluSz|SINE|Alu	106509	NR_037406	100500817		NR_037406	ENSG00000265635	MIR3612	-	microRNA 3612	ncRNA	23.04	1.94	11.87628866	6.71E-14
chr12-2572	chr12	128893327	128894327	+	14.1	1000	"intron (NM_001136103, intron 1 of 8)"	"intron (NM_001136103, intron 1 of 8)"	115190	NR_037406	100500817		NR_037406	ENSG00000265635	MIR3612	-	microRNA 3612	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr12-2573	chr12	128992711	128994442	+	25	1731	"intron (NM_001136103, intron 2 of 8)"	L2b|LINE|L2	214939	NR_037406	100500817		NR_037406	ENSG00000265635	MIR3612	-	microRNA 3612	ncRNA	24.96	0.97	25.73195876	2.01E-20
chr12-2577	chr12	130229521	130230521	+	15.4	1000	"intron (NM_133448, intron 1 of 8)"	"intron (NM_133448, intron 1 of 8)"	158191	NM_133448	121256	Hs.507268	NM_133448	ENSG00000151952	TMEM132D	MOLT|PPP1R153	transmembrane protein 132D	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr12-2578	chr12	130378009	130379009	+	14.1	1000	"intron (NM_133448, intron 1 of 8)"	"intron (NM_133448, intron 1 of 8)"	9703	NM_133448	121256	Hs.507268	NM_133448	ENSG00000151952	TMEM132D	MOLT|PPP1R153	transmembrane protein 132D	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr12-258	chr12	54093326	54094326	+	20.5	1000	Intergenic	Intergenic	-23314	NM_001002031	517	Hs.524464	NM_005176	ENSG00000135390	ATP5G2	ATP5A	"ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9)"	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr12-2580	chr12	130492664	130495197	+	44.8	2533	Intergenic	Intergenic	32957	NR_024457	100190940	Hs.625993	NR_024457	ENSG00000214039	LOC100190940	-	uncharacterized LOC100190940	ncRNA	44.81	4.85	9.239175258	4.43E-22
chr12-2582	chr12	130641335	130642335	+	15.4	1000	"intron (NR_033834, intron 1 of 3)"	"intron (NR_033834, intron 1 of 3)"	4388	NR_033834	440119	Hs.288262	NR_033834	ENSG00000250208	FZD10-AS1	-	FZD10 antisense RNA 1 (head to head)	ncRNA	15.36	0	15.82260557	1.26E-14
chr12-2583	chr12	130710048	130711048	+	14.7	1000	Intergenic	Intergenic	63544	NM_007197	11211	Hs.31664	NM_007197	ENSG00000111432	FZD10	CD350|FZ-10|Fz10|FzE7|hFz10	frizzled class receptor 10	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr12-2592	chr12	131155090	131156090	+	15.4	1000	Intergenic	AluSx1|SINE|Alu	-153180	NM_015347	23504	Hs.657441	NM_015347	ENSG00000060709	RIMBP2	PPP1R133|RBP2|RIM-BP2	RIMS binding protein 2	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr12-2594	chr12	131259570	131261223	+	23.7	1653	Intergenic	Intergenic	63423	NM_194356	2054	Hs.437585	NM_001980	ENSG00000111450	STX2	EPIM|EPM|STX2A|STX2B|STX2C	syntaxin 2	protein-coding	23.68	1.94	12.20618557	6.71E-14
chr12-2595	chr12	131404136	131405136	+	13.4	1000	Intergenic	Intergenic	-33816	NM_198827	283383	Hs.719239	NM_198827	ENSG00000111452	ADGRD1	GPR133|PGR25	adhesion G protein-coupled receptor D1	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr12-2597	chr12	131436332	131437332	+	14.1	1000	Intergenic	Intergenic	-1620	NM_198827	283383	Hs.719239	NM_198827	ENSG00000111452	ADGRD1	GPR133|PGR25	adhesion G protein-coupled receptor D1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr12-2601	chr12	131848238	131849238	+	14.1	1000	"intron (NR_103736, intron 2 of 3)"	"intron (NR_103736, intron 2 of 3)"	16723	NR_103736	338797	Hs.592007	NM_001025466		LOC338797	-	uncharacterized LOC338797	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr12-2603	chr12	132001820	132002820	+	14.1	1000	Intergenic	L1PA16|LINE|L1	170305	NR_103736	338797	Hs.592007	NM_001025466		LOC338797	-	uncharacterized LOC338797	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr12-2605	chr12	132040919	132041919	+	14.7	1000	Intergenic	Intergenic	-154213	NM_004592	6433	Hs.308171	NM_004592	ENSG00000061936	SFSWAP	SFRS8|SWAP	splicing factor SWAP homolog	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr12-2606	chr12	132097750	132104210	+	96	6460	Intergenic	Intergenic	-94652	NM_004592	6433	Hs.308171	NM_004592	ENSG00000061936	SFSWAP	SFRS8|SWAP	splicing factor SWAP homolog	protein-coding	96.01	9.71	9.887744593	2.22E-47
chr12-2608	chr12	132686823	132690359	+	48	3536	"intron (NM_001122636, intron 6 of 10)"	"intron (NM_001122636, intron 6 of 10)"	1982	NM_021808	50614	Hs.301062	NM_021808	ENSG00000182870	GALNT9	GALNAC-T9|GALNACT9	polypeptide N-acetylgalactosaminyltransferase 9	protein-coding	48.01	7.77	6.178893179	1.86E-17
chr12-2610	chr12	132932694	132933694	+	15.4	1000	Intergenic	Intergenic	26758	NR_120467	101928416		NR_120467	ENSG00000255916	LOC101928416	-	uncharacterized LOC101928416	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr12-2611	chr12	132956941	132958309	+	17.9	1368	Intergenic	Intergenic	51189	NR_120467	101928416		NR_120467	ENSG00000255916	LOC101928416	-	uncharacterized LOC101928416	ncRNA	17.92	3.4	5.270588235	8.42E-07
chr12-262	chr12	54384622	54385905	+	23.7	1283	promoter-TSS (NR_029617)	promoter-TSS (NR_029617)	-259	NR_029617	406973		NR_029617	ENSG00000207924	MIR196A2	MIRN196-2|MIRN196A2|mir-196a-2	microRNA 196a-2	ncRNA	23.68	2.43	9.744855967	2.61E-12
chr12-274	chr12	117667679	117669324	+	30.7	1645	"intron (NM_001204218, intron 23 of 29)"	"intron (NM_001204218, intron 23 of 29)"	-40201	NM_015002	23014	Hs.740376	NM_015002	ENSG00000135108	FBXO21	FBX21	F-box protein 21	protein-coding	30.72	6.8	4.517647059	2.53E-09
chr12-277	chr12	131189807	131191103	+	23.7	1296	Intergenic	Intergenic	133364	NM_194356	2054	Hs.437585	NM_001980	ENSG00000111450	STX2	EPIM|EPM|STX2A|STX2B|STX2C	syntaxin 2	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr12-280	chr12	1737981	1743584	+	103.7	5603	"intron (NM_032642, intron 2 of 4)"	"intron (NM_032642, intron 2 of 4)"	2370	NM_032642	81029	Hs.306051	NM_030775	ENSG00000111186	WNT5B	-	Wnt family member 5B	protein-coding	103.69	16.02	6.472534332	5.73E-38
chr12-285	chr12	2746517	2749911	+	53.1	3394	"intron (NM_001129846, intron 30 of 45)"	"intron (NM_001129846, intron 30 of 45)"	33172	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA	53.13	8.25	6.44	8.48E-20
chr12-286	chr12	3375074	3376342	+	22.4	1268	"intron (NM_006675, intron 3 of 8)"	"intron (NM_006675, intron 3 of 8)"	-114807	NM_001256536	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	22.4	2.43	9.218106996	2.49E-11
chr12-292	chr12	4341722	4344988	+	49.9	3266	Intergenic	Intergenic	-39547	NM_001759	894	Hs.376071	NM_001759	ENSG00000118971	CCND2	KIAK0002|MPPH3	cyclin D2	protein-coding	49.93	12.13	4.116240725	6.08E-13
chr12-294	chr12	6199705	6200962	+	23.7	1257	"intron (NM_000552, intron 6 of 51)"	"intron (NM_000552, intron 6 of 51)"	33508	NM_000552	7450	Hs.440848	NM_000552	ENSG00000110799	VWF	F8VWF|VWD	von Willebrand factor	protein-coding	23.68	4.37	5.418764302	2.46E-08
chr12-300	chr12	13042308	13044631	+	38.4	2323	promoter-TSS (NM_003979)	promoter-TSS (NM_003979)	-487	NM_003979	9052	Hs.631733	NM_003979	ENSG00000013588	GPRC5A	GPCR5A|PEIG-1|RAI3|RAIG1|TIG1	G protein-coupled receptor class C group 5 member A	protein-coding	38.4	8.74	4.393592677	5.52E-11
chr12-301	chr12	13047700	13049333	+	28.8	1633	"intron (NM_003979, intron 1 of 3)"	L2|LINE|L2	4560	NM_003979	9052	Hs.631733	NM_003979	ENSG00000013588	GPRC5A	GPCR5A|PEIG-1|RAI3|RAIG1|TIG1	G protein-coupled receptor class C group 5 member A	protein-coding	28.8	6.31	4.564183835	1.42E-08
chr12-302	chr12	13322615	13323615	+	19.8	1000	Intergenic	HAL1|LINE|L1	-26487	NM_001423	2012	Hs.719042	NM_001423	ENSG00000134531	EMP1	CL-20|EMP-1|TMP	epithelial membrane protein 1	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr12-312	chr12	52835963	52837299	+	30.1	1336	Intergenic	Intergenic	-8521	NM_004693	9119	Hs.697046	NM_004693	ENSG00000170454	KRT75	K6HF|KB18|PFB	keratin 75	protein-coding	30.08	5.34	5.632958801	1.33E-10
chr12-320	chr12	54225611	54226611	+	20.5	1000	Intergenic	Intergenic	-75293	NR_104332	102216268	Hs.742074	NR_104332	ENSG00000260492	CISTR	CISTR-ACT|CISTRACT|re52431	chondrogenesis-associated transcript	ncRNA	20.48	4.37	4.686498856	6.64E-07
chr12-335	chr12	58285742	58287381	+	26.9	1639	Intergenic	Intergenic	43386	NR_038269	100506844	Hs.90286	NR_038269		LOC100506844	-	uncharacterized LOC100506844	ncRNA	26.88	4.85	5.542268041	7.61E-10
chr12-339	chr12	105348035	105353052	+	89	5017	Intergenic	L1MB7|LINE|L1	-28071	NM_032148	84102	Hs.577463	NM_032148	ENSG00000136052	SLC41A2	SLC41A1-L1	solute carrier family 41 member 2	protein-coding	88.97	12.62	7.049920761	1.33E-34
chr12-348	chr12	111639718	111640718	+	19.2	1000	"intron (NM_015267, intron 1 of 21)"	"intron (NM_015267, intron 1 of 21)"	-101728	NR_106818	102465455		NR_106818	ENSG00000273700	MIR6760	hsa-mir-6760	microRNA 6760	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr12-351	chr12	114709800	114710800	+	21.1	1000	Intergenic	Intergenic	133668	NM_181486	6910	Hs.381715	NM_000192	ENSG00000089225	TBX5	HOS	T-box 5	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr12-353	chr12	115119278	115120798	+	29.4	1520	"intron (NM_016569, intron 1 of 7)"	"intron (NM_016569, intron 1 of 7)"	1931	NM_016569	6926	Hs.744016	NM_005996	ENSG00000135111	TBX3	TBX3-ISO|UMS|XHL	T-box 3	protein-coding	29.44	5.82	5.058419244	6.85E-10
chr12-355	chr12	118315563	118316563	+	20.5	1000	"intron (NM_173598, intron 1 of 19)"	"intron (NM_173598, intron 1 of 19)"	89965	NM_173598	283455	Hs.375836	NM_173598	ENSG00000171435	KSR2	-	kinase suppressor of ras 2	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr12-356	chr12	121021444	121024935	+	74.2	3491	Intergenic	AluSc8|SINE|Alu	-3988	NM_198202	51367	Hs.279913	NM_015918	ENSG00000167272	POP5	HSPC004|RPP2|RPP20|hPop5	"POP5 homolog, ribonuclease P/MRP subunit"	protein-coding	74.25	7.28	10.19917582	9.72E-38
chr12-359	chr12	121087296	121088817	+	26.9	1521	promoter-TSS (NM_004276)	promoter-TSS (NM_004276)	-254	NM_004276	9478	Hs.458482	NM_004276	ENSG00000157782	CABP1	CALBRAIN|HCALB_BR	calcium binding protein 1	protein-coding	26.88	4.85	5.542268041	7.61E-10
chr12-367	chr12	570133	572908	+	49.3	2775	"intron (NM_173593, intron 1 of 19)"	"intron (NM_173593, intron 1 of 19)"	1977	NM_173593	283358	Hs.504416	NM_173593	ENSG00000139044	B4GALNT3	-	"beta-1,4-N-acetyl-galactosaminyltransferase 3"	protein-coding	49.29	9.71	5.076210093	3.28E-15
chr12-381	chr12	5721798	5722798	+	19.2	1000	"intron (NM_001278596, intron 18 of 25)"	"intron (NM_001278596, intron 18 of 25)"	119000	NM_002527	4908	Hs.99171	NM_002527	ENSG00000185652	NTF3	HDNF|NGF-2|NGF2|NT-3|NT3	neurotrophin 3	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr12-383	chr12	6808849	6811249	+	49.3	2400	promoter-TSS (NM_153685)	promoter-TSS (NM_153685)	-40	NM_153685	196500	Hs.44067	NM_153685	ENSG00000139200	PIANP	C12orf53|LEDA1|PANP|leda-1	PILR alpha associated neural protein	protein-coding	49.29	6.8	7.248529412	3.87E-20
chr12-384	chr12	7170234	7171794	+	30.7	1560	"intron (NM_001734, intron 4 of 11)"	"intron (NM_001734, intron 4 of 11)"	3049	NM_001346850	716	Hs.458355	NM_001734	ENSG00000182326	C1S	EDSPD2	complement C1s	protein-coding	30.72	4.85	6.334020619	3.34E-12
chr12-385	chr12	8170183	8173362	+	41	3179	Intergenic	CpG	-13587	NM_018416	55810	Hs.120844	NM_018416	ENSG00000065970	FOXJ2	FHX	forkhead box J2	protein-coding	40.97	5.82	7.0395189	5.30E-17
chr12-395	chr12	48639717	48640717	+	20.5	1000	Intergenic	A-rich|Low_complexity|Low_complexity	-43142	NM_001004134	121275	Hs.446790	NM_001004134	ENSG00000172640	OR10AD1	OR10AD1P|OR12-1	olfactory receptor family 10 subfamily AD member 1	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr12-396	chr12	49181520	49184400	+	46.1	2880	promoter-TSS (NM_015270)	promoter-TSS (NM_015270)	30	NR_110019	100506125	Hs.306727	NR_110019	ENSG00000257660	LOC100506125	-	uncharacterized LOC100506125	ncRNA	46.09	4.85	9.503092784	4.65E-23
chr12-403	chr12	52945724	52947567	+	39	1843	"exon (NM_033448, exon 1 of 9)"	"exon (NM_033448, exon 1 of 9)"	286	NM_033448	112802	Hs.660007	NM_033448	ENSG00000139648	KRT71	HYPT13|K6IRS1|KRT6IRS|KRT6IRS1	keratin 71	protein-coding	39.04	7.28	5.362637363	6.93E-13
chr12-405	chr12	53329716	53331029	+	23	1313	"intron (NM_001256293, intron 1 of 8)"	AluSp|SINE|Alu	-10119	NM_001256282	3856	Hs.533782	NM_002273	ENSG00000170421	KRT8	CARD2|CK-8|CK8|CYK8|K2C8|K8|KO	keratin 8	protein-coding	23.04	2.43	9.481481481	2.61E-12
chr12-406	chr12	53718834	53720358	+	27.5	1524	TTS (NM_152860)	TTS (NM_152860)	-4184	NM_015665	8086	Hs.369144	NM_015665	ENSG00000094914	AAAS	AAA|AAASb|ADRACALA|ADRACALIN|ALADIN|GL003	aladin WD repeat nucleoporin	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr12-414	chr12	54379003	54382762	+	64	3759	"intron (NM_017409, intron 1 of 1)"	"intron (NM_017409, intron 1 of 1)"	-1579	NR_047506	100874365	Hs.607141	NR_047506	ENSG00000251151	HOXC-AS3	-	HOXC cluster antisense RNA 3	ncRNA	64.01	6.8	9.413235294	3.21E-31
chr12-415	chr12	54387930	54410592	+	389.2	22662	Intergenic	Intergenic	-3629	NM_022658	3224	Hs.664500	NM_022658	ENSG00000037965	HOXC8	HOX3|HOX3A	homeobox C8	protein-coding	389.17	44.17	8.810731266	1.47E-172
chr12-427	chr12	69294890	69295890	+	19.8	1000	"intron (NM_001005502, intron 2 of 8)"	"intron (NM_001005502, intron 2 of 8)"	31589	NM_001005502	1368	Hs.654387	NM_001874	ENSG00000135678	CPM	-	carboxypeptidase M	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr12-429	chr12	94543042	94544899	+	33.3	1857	"intron (NM_005761, intron 1 of 30)"	CpG	1471	NM_005761	10154	Hs.584845	NM_005761	ENSG00000136040	PLXNC1	CD232|PLXN-C1|VESPR	plexin C1	protein-coding	33.28	3.88	8.577319588	4.55E-16
chr12-431	chr12	98840900	98842427	+	26.9	1527	Intergenic	AluSz|SINE|Alu	9260	NR_033801	121456	Hs.620643	NR_033801	ENSG00000227825	SLC9A7P1	-	solute carrier family 9 member 7 pseudogene 1	pseudo	26.88	2.91	9.237113402	7.03E-14
chr12-435	chr12	106976964	106978991	+	35.8	2027	"intron (NM_213594, intron 1 of 17)"	"intron (NM_213594, intron 1 of 17)"	1292	NM_213594	5992	Hs.388827	NM_002920	ENSG00000111783	RFX4	NYD-SP10	regulatory factor X4	protein-coding	35.84	4.85	7.389690722	1.37E-15
chr12-437	chr12	111677579	111678579	+	19.2	1000	"intron (NM_015267, intron 3 of 21)"	"intron (NM_015267, intron 3 of 21)"	-63867	NR_106818	102465455		NR_106818	ENSG00000273700	MIR6760	hsa-mir-6760	microRNA 6760	ncRNA	19.2	3.4	5.647058824	1.47E-07
chr12-441	chr12	120832226	120833226	+	20.5	1000	Intergenic	Intergenic	-25743	NM_002442	4440	Hs.158311	NM_002442	ENSG00000135097	MSI1	-	musashi RNA binding protein 1	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr12-443	chr12	122687513	122689152	+	32	1639	TTS (NM_152759)	TTS (NM_152759)	104	NM_001330492	79369	Hs.363315	NM_030765	ENSG00000176383	B3GNT4	B3GN-T4|beta3Gn-T4	"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4"	protein-coding	32	2.91	10.99656357	6.10E-18
chr12-445	chr12	129221278	129222278	+	19.8	1000	Intergenic	Intergenic	86763	NM_145648	121260	Hs.507260	NM_145648	ENSG00000139370	SLC15A4	FP12591|PHT1|PTR4	solute carrier family 15 member 4	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr12-450	chr12	613615	614882	+	23	1267	"intron (NM_173593, intron 1 of 19)"	AluSq|SINE|Alu	44705	NM_173593	283358	Hs.504416	NM_173593	ENSG00000139044	B4GALNT3	-	"beta-1,4-N-acetyl-galactosaminyltransferase 3"	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr12-452	chr12	1612217	1613544	+	23.7	1327	"non-coding (NR_028415, exon 2 of 2)"	"non-coding (NR_028415, exon 2 of 2)"	3223	NR_028415	100292680	Hs.391695	NR_028415		LINC00942	-	long intergenic non-protein coding RNA 942	ncRNA	23.68	4.85	4.882474227	1.15E-07
chr12-457	chr12	2851747	2852747	+	18.6	1000	Intergenic	Intergenic	28588	NR_033958	283440	Hs.658536	NR_033958	ENSG00000255669	LOC283440	-	uncharacterized LOC283440	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr12-459	chr12	3145920	3147614	+	29.4	1694	"intron (NM_201443, intron 8 of 10)"	"intron (NM_201443, intron 8 of 10)"	-39754	NM_001168320	10867	Hs.504517	NM_006675	ENSG00000011105	TSPAN9	NET-5|NET5|PP1057	tetraspanin 9	protein-coding	29.44	4.37	6.736842105	2.70E-12
chr12-461	chr12	3272860	3274124	+	22.4	1264	"intron (NM_006675, intron 2 of 8)"	"intron (NM_006675, intron 2 of 8)"	86971	NM_006675	10867	Hs.504517	NM_006675	ENSG00000011105	TSPAN9	NET-5|NET5|PP1057	tetraspanin 9	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr12-472	chr12	4828137	4829137	+	18.6	1000	"intron (NR_110112, intron 1 of 3)"	"intron (NR_110112, intron 1 of 3)"	631	NR_110112	101929549	Hs.663336	NR_110112	ENSG00000255474	LOC101929549	-	uncharacterized LOC101929549	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr12-475	chr12	5468128	5469128	+	19.2	1000	Intergenic	Intergenic	-72652	NM_001102654	4908	Hs.99171	NM_002527	ENSG00000185652	NTF3	HDNF|NGF-2|NGF2|NT-3|NT3	neurotrophin 3	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr12-476	chr12	5607772	5608772	+	19.8	1000	Intergenic	Intergenic	4974	NM_002527	4908	Hs.99171	NM_002527	ENSG00000185652	NTF3	HDNF|NGF-2|NGF2|NT-3|NT3	neurotrophin 3	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr12-477	chr12	5922849	5924105	+	21.1	1256	"intron (NM_001278596, intron 7 of 25)"	LTR33|LTR|ERVL	130948	NM_001278596	57101	Hs.148970	NM_020373	ENSG00000047617	ANO2	C12orf3|TMEM16B	anoctamin 2	protein-coding	21.12	2.43	8.691358025	2.25E-10
chr12-478	chr12	5948606	5949606	+	18.6	1000	"intron (NM_001278596, intron 4 of 25)"	"intron (NM_001278596, intron 4 of 25)"	105319	NM_001278596	57101	Hs.148970	NM_020373	ENSG00000047617	ANO2	C12orf3|TMEM16B	anoctamin 2	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr12-479	chr12	6063197	6064197	+	17.9	1000	"intron (NM_000552, intron 47 of 51)"	L1MEf|LINE|L1	-8299	NM_001278597	57101	Hs.148970	NM_020373	ENSG00000047617	ANO2	C12orf3|TMEM16B	anoctamin 2	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr12-484	chr12	13065172	13066673	+	23	1501	"3' UTR (NM_003979, exon 4 of 4)"	"3' UTR (NM_003979, exon 4 of 4)"	-2841	NR_030345	693199		NR_030345	ENSG00000013588	MIR614	MIRN614|hsa-mir-614	microRNA 614	ncRNA	23.04	3.4	6.776470588	5.45E-10
chr12-486	chr12	31031665	31032665	+	19.8	1000	Intergenic	AluSz6|SINE|Alu	-47673	NM_001080509	441631	Hs.505141	NM_001080509	ENSG00000110900	TSPAN11	VSSW1971	tetraspanin 11	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr12-487	chr12	31077548	31082408	+	72.3	4860	"intron (NM_001080509, intron 1 of 7)"	"intron (NM_001080509, intron 1 of 7)"	140	NM_001080509	441631	Hs.505141	NM_001080509	ENSG00000110900	TSPAN11	VSSW1971	tetraspanin 11	protein-coding	72.33	14.08	5.137073864	5.94E-22
chr12-488	chr12	31712297	31713297	+	17.3	1000	"intron (NM_001308339, intron 1 of 22)"	"intron (NM_001308339, intron 1 of 22)"	-30060	NR_046909	100874249	Hs.627628	NR_046909	ENSG00000255867	DENND5B-AS1	-	DENND5B antisense RNA 1	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr12-492	chr12	48255098	48256098	+	17.9	1000	"intron (NM_001017536, intron 4 of 9)"	"intron (NM_001017536, intron 4 of 9)"	-41835	NM_001308090	51564	Hs.200063	NM_015401	ENSG00000061273	HDAC7	HD7|HD7A|HDAC7A	histone deacetylase 7	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr12-495	chr12	49482759	49486019	+	65.9	3260	"intron (NM_021044, intron 2 of 2)"	"intron (NM_021044, intron 2 of 2)"	4213	NM_021044	50846	Hs.524382	NM_021044	ENSG00000139549	DHH	GDXYM|HHG-3|SRXY7	desert hedgehog	protein-coding	65.93	10.68	6.173220974	1.76E-23
chr12-496	chr12	50251050	50252311	+	20.5	1261	Intergenic	AluSz|SINE|Alu	-14768	NM_181708	144233	Hs.142736	NM_181708	ENSG00000186666	BCDIN3D	-	BCDIN3 domain containing RNA methyltransferase	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr12-499	chr12	52950326	52951326	+	19.8	1000	Intergenic	Intergenic	-3895	NM_033448	112802	Hs.660007	NM_033448	ENSG00000139648	KRT71	HYPT13|K6IRS1|KRT6IRS|KRT6IRS1	keratin 71	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr12-500	chr12	52957849	52960247	+	43.5	2398	TTS (NM_175053)	TTS (NM_175053)	8561	NM_175053	121391	Hs.660125	NM_175053	ENSG00000170484	KRT74	ADWH|HTSS2|HYPT3|K6IRS4|KRT5C|KRT6IRS4	keratin 74	protein-coding	43.53	7.77	5.602316602	3.96E-15
chr12-502	chr12	54142551	54147009	+	81.3	4458	"intron (NR_104332, intron 2 of 2)"	CpG	839	NR_104333	102216268	Hs.742074	NR_104332	ENSG00000260492	CISTR	CISTR-ACT|CISTRACT|re52431	chondrogenesis-associated transcript	ncRNA	81.29	12.13	6.701566364	1.55E-30
chr12-511	chr12	54419732	54420732	+	20.5	1000	"intron (NM_014620, intron 1 of 3)"	"intron (NM_014620, intron 1 of 3)"	-1962	NM_004503	3223	Hs.549040	NM_004503	ENSG00000197757	HOXC6	CP25|HHO.C8|HOX3|HOX3C	homeobox C6	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr12-516	chr12	56100454	56103115	+	44.2	2661	promoter-TSS (NM_002206)	promoter-TSS (NM_002206)	-98	NM_001144996	3679	Hs.524484	NM_002206	ENSG00000135424	ITGA7	-	integrin subunit alpha 7	protein-coding	44.17	7.77	5.684684685	3.96E-15
chr12-517	chr12	57227596	57228862	+	21.1	1266	Intergenic	MER50-int|LTR|ERV1	71227	NM_003725	8630	Hs.524513	NM_003725	ENSG00000025423	HSD17B6	HSE|RODH|SDR9C6	hydroxysteroid 17-beta dehydrogenase 6	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr12-518	chr12	57350688	57351688	+	19.8	1000	"exon (NM_003708, exon 1 of 4)"	"exon (NM_003708, exon 1 of 4)"	1970	NM_001320108	8608	Hs.134958	NM_003708	ENSG00000139547	RDH16	RODH-4|SDR9C8	retinol dehydrogenase 16 (all-trans)	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr12-52	chr12	58256102	58260353	+	80.7	4251	Intergenic	Intergenic	-17480	NM_005730	10106	Hs.524530	NM_005730	ENSG00000175215	CTDSP2	OS4|PSR2|SCP2	CTD small phosphatase 2	protein-coding	80.65	10.19	7.914622179	1.17E-34
chr12-521	chr12	66463798	66465326	+	26.9	1528	Intergenic	MSTC|LTR|ERVL-MaLR	-47056	NR_106722	102464827		NR_106722	ENSG00000276878	MIR6074	hsa-mir-6074	microRNA 6074	ncRNA	26.88	3.88	6.927835052	1.44E-11
chr12-523	chr12	68579498	68580498	+	19.2	1000	Intergenic	LTR79|LTR|ERVL	-26477	NM_000619	3458	Hs.856	NM_000619	ENSG00000111537	IFNG	IFG|IFI	interferon gamma	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr12-524	chr12	70758542	70759542	+	19.2	1000	Intergenic	Intergenic	-1020	NM_014505	27345	Hs.525529	NM_014505	ENSG00000135643	KCNMB4	-	potassium calcium-activated channel subfamily M regulatory beta subunit 4	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr12-529	chr12	105358159	105359469	+	26.9	1310	Intergenic	L2a|LINE|L2	-21284	NM_152318	121053	Hs.295563	NM_152318	ENSG00000151131	C12orf45	-	chromosome 12 open reading frame 45	protein-coding	26.88	5.34	5.033707865	3.94E-09
chr12-531	chr12	108697969	108699235	+	19.2	1266	"intron (NM_001142344, intron 1 of 2)"	"intron (NM_001142344, intron 1 of 2)"	15837	NM_001142345	1240	Hs.197143	NM_004072	ENSG00000174600	CMKLR1	CHEMERINR|ChemR23|DEZ|RVER1	chemerin chemokine-like receptor 1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr12-542	chr12	119990412	119991412	+	19.2	1000	Intergenic	Intergenic	-40352	NM_001136534	387890	Hs.530965	NM_001136534	ENSG00000224982	TMEM233	DSPB2|IFITMD2	transmembrane protein 233	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr12-549	chr12	131508637	131509637	+	19.2	1000	"intron (NM_001330497, intron 14 of 25)"	Tigger3a|DNA|TcMar-Tigger	-30616	NR_131950	105755954	Hs.677534	NR_131950		LACAT8	-	lung adenocarcinoma-associated transcript 8	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr12-551	chr12	133184894	133187557	+	57.6	2663	"intron (NM_001195520, intron 1 of 5)"	AluSx|SINE|Alu	812	NM_001195520	100507055	Hs.282811	NM_001195520	ENSG00000204583	LRCOL1	-	leucine rich colipase like 1	protein-coding	57.61	7.28	7.913461538	3.02E-25
chr12-556	chr12	656582	657859	+	21.1	1277	"exon (NM_173593, exon 8 of 20)"	"exon (NM_173593, exon 8 of 20)"	38432	NR_134624	105369595	Hs.504422	NR_134624		LOC105369595	-	uncharacterized LOC105369595	ncRNA	21.12	0.97	21.77319588	2.68E-16
chr12-561	chr12	2692800	2695952	+	46.1	3152	"intron (NM_001129830, intron 16 of 47)"	"intron (NM_001129830, intron 16 of 47)"	87010	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA	46.09	9.22	4.998915401	1.85E-14
chr12-563	chr12	3130847	3132213	+	21.1	1366	"intron (NM_201443, intron 8 of 10)"	"intron (NM_201443, intron 8 of 10)"	-54991	NM_001168320	10867	Hs.504517	NM_006675	ENSG00000011105	TSPAN9	NET-5|NET5|PP1057	tetraspanin 9	protein-coding	21.12	2.43	8.691358025	2.25E-10
chr12-566	chr12	3554141	3556008	+	34.6	1867	"intron (NM_001256536, intron 1 of 9)"	"intron (NM_001256536, intron 1 of 9)"	-45290	NM_019854	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	34.56	3.88	8.907216495	5.09E-17
chr12-579	chr12	5816938	5818199	+	21.8	1261	"intron (NM_001278596, intron 15 of 25)"	L2b|LINE|L2	214270	NM_002527	4908	Hs.99171	NM_002527	ENSG00000185652	NTF3	HDNF|NGF-2|NGF2|NT-3|NT3	neurotrophin 3	protein-coding	21.76	3.4	6.4	3.73E-09
chr12-580	chr12	6022375	6023641	+	21.1	1266	"intron (NM_001278596, intron 3 of 25)"	"intron (NM_001278596, intron 3 of 25)"	31417	NM_001278596	57101	Hs.148970	NM_020373	ENSG00000047617	ANO2	C12orf3|TMEM16B	anoctamin 2	protein-coding	21.12	2.43	8.691358025	2.25E-10
chr12-587	chr12	7861967	7862967	+	17.9	1000	Intergenic	AluSx|SINE|Alu	-1583	NM_199286	359787	Hs.131358	NM_199286	ENSG00000187569	DPPA3	STELLA	developmental pluripotency associated 3	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr12-589	chr12	12379330	12380661	+	21.8	1331	"intron (NM_002336, intron 2 of 22)"	L1MCa|LINE|L1	39816	NM_002336	4040	Hs.584775	NM_002336	ENSG00000070018	LRP6	ADCAD2|STHAG7	LDL receptor related protein 6	protein-coding	21.76	4.37	4.979405034	1.32E-07
chr12-592	chr12	15941124	15942431	+	21.8	1307	"intron (NM_004447, intron 1 of 20)"	CpG	733	NM_004447	2059	Hs.591160	NM_004447	ENSG00000151491	EPS8	DFNB102	epidermal growth factor receptor pathway substrate 8	protein-coding	21.76	4.37	4.979405034	1.32E-07
chr12-596	chr12	32552084	32553626	+	26.9	1542	Intergenic	CpG	-86051	NM_001330374	121512	Hs.117835	NM_139241	ENSG00000139132	FGD4	CMT4H|FRABP|ZFYVE6	"FYVE, RhoGEF and PH domain containing 4"	protein-coding	26.88	5.82	4.618556701	1.71E-08
chr12-598	chr12	48127098	48129863	+	44.2	2765	TTS (NM_006105)	TTS (NM_006105)	-9125	NM_001172440	8909	Hs.997	NM_006025	ENSG00000111405	ENDOU	P11|PP11|PRSS26	"endonuclease, poly(U) specific"	protein-coding	44.17	4.85	9.107216495	4.10E-21
chr12-603	chr12	48344772	48345772	+	19.2	1000	Intergenic	Intergenic	-12058	NM_001143842	79022	Hs.596726	NM_024056	ENSG00000134291	TMEM106C	-	transmembrane protein 106C	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr12-604	chr12	49390905	49391905	+	17.9	1000	"exon (NM_015086, exon 2 of 2)"	"exon (NM_015086, exon 2 of 2)"	1683	NM_015086	23109	Hs.591044	NM_015086	ENSG00000181418	DDN	-	dendrin	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr12-605	chr12	50444893	50448245	+	48.6	3352	Intergenic	GA-rich|Low_complexity|Low_complexity	-4851	NR_046389	41	Hs.274361	NM_001095	ENSG00000110881	ASIC1	ACCN2|ASIC|BNaC2	acid sensing ion channel subunit 1	protein-coding	48.65	7.77	6.261261261	2.96E-18
chr12-606	chr12	52340268	52341268	+	18.6	1000	Intergenic	AluSx1|SINE|Alu	-4683	NM_004302	91	Hs.438918	NM_004302	ENSG00000135503	ACVR1B	ACTRIB|ACVRLK4|ALK4|SKR2	activin A receptor type 1B	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr12-610	chr12	54234874	54236594	+	26.9	1720	Intergenic	Intergenic	-84916	NR_104332	102216268	Hs.742074	NR_104332	ENSG00000260492	CISTR	CISTR-ACT|CISTRACT|re52431	chondrogenesis-associated transcript	ncRNA	26.88	4.85	5.542268041	7.61E-10
chr12-616	chr12	54358482	54364507	+	96	6025	"intron (NR_003716, intron 1 of 5)"	"intron (NR_003716, intron 1 of 5)"	1046	NR_003716	100124700	Hs.197076	NR_003716	ENSG00000228630	HOTAIR	HOXAS|HOXC-AS4|HOXC11-AS1|NCRNA00072	HOX transcript antisense RNA	ncRNA	96.01	17.47	5.495706926	7.89E-31
chr12-624	chr12	54441552	54445674	+	55.7	4122	"intron (NM_014620, intron 1 of 3)"	"intron (NM_014620, intron 1 of 3)"	-4048	NM_153633	3221	Hs.549040	NM_014620	ENSG00000198353	HOXC4	HOX3|HOX3E|cp19	homeobox C4	protein-coding	55.69	11.16	4.990143369	9.34E-17
chr12-639	chr12	68585579	68590281	+	78.7	4702	Intergenic	Intergenic	31641	NM_018402	55801	Hs.272350	NM_018402	ENSG00000111536	IL26	AK155|IL-26	interleukin 26	protein-coding	78.73	17.47	4.506582713	5.20E-21
chr12-641	chr12	93465434	93466684	+	21.1	1250	"intron (NR_040096, intron 3 of 4)"	"intron (NR_040096, intron 3 of 4)"	-102083	NR_120492	102724933	Hs.663947	NR_120492	ENSG00000258171	LOC102724933	-	uncharacterized LOC102724933	ncRNA	21.12	2.43	8.691358025	2.25E-10
chr12-647	chr12	106986568	106987568	+	17.9	1000	"intron (NM_213594, intron 1 of 17)"	"intron (NM_213594, intron 1 of 17)"	-7847	NM_001206691	5992	Hs.388827	NM_002920	ENSG00000111783	RFX4	NYD-SP10	regulatory factor X4	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr12-650	chr12	108543693	108544693	+	19.2	1000	"intron (NM_001304447, intron 1 of 9)"	L2b|LINE|L2	18685	NM_001304447	9671	Hs.143591	NM_014653	ENSG00000075035	WSCD2	-	WSC domain containing 2	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr12-651	chr12	108622866	108624211	+	21.1	1345	"intron (NM_001304447, intron 7 of 9)"	"intron (NM_001304447, intron 7 of 9)"	90901	NM_001142345	1240	Hs.197143	NM_004072	ENSG00000174600	CMKLR1	CHEMERINR|ChemR23|DEZ|RVER1	chemerin chemokine-like receptor 1	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr12-657	chr12	114510413	114511671	+	20.5	1258	Intergenic	Intergenic	-106866	NM_001146699	9904	Hs.7482	NM_016196	ENSG00000122965	RBM19	-	RNA binding motif protein 19	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr12-660	chr12	114993959	114994959	+	19.2	1000	Intergenic	AluSg|SINE|Alu	127510	NM_016569	6926	Hs.744016	NM_005996	ENSG00000135111	TBX3	TBX3-ISO|UMS|XHL	T-box 3	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr12-661	chr12	115888139	115889739	+	30.7	1600	Intergenic	Intergenic	697520	NR_030351	693205		NR_030351	ENSG00000207967	MIR620	MIRN620|hsa-mir-620	microRNA 620	ncRNA	30.72	2.91	10.55670103	6.73E-17
chr12-664	chr12	120799506	120801109	+	25.6	1603	"intron (NM_002442, intron 6 of 14)"	"intron (NM_002442, intron 6 of 14)"	6676	NM_002442	4440	Hs.158311	NM_002442	ENSG00000135097	MSI1	-	musashi RNA binding protein 1	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr12-668	chr12	126124306	126125306	+	18.6	1000	"intron (NM_001286219, intron 1 of 4)"	"intron (NM_001286219, intron 1 of 4)"	17808	NM_001286219	114795	Hs.524838	NM_052907	ENSG00000139364	TMEM132B	-	transmembrane protein 132B	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr12-672	chr12	131117904	131119189	+	21.1	1285	Intergenic	Intergenic	-116136	NM_015347	23504	Hs.657441	NM_015347	ENSG00000060709	RIMBP2	PPP1R133|RBP2|RIM-BP2	RIMS binding protein 2	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr12-678	chr12	267844	269443	+	26.2	1599	"intron (NM_015232, intron 6 of 12)"	HAL1|LINE|L1	-10311	NR_033859	574538	Hs.589138	NR_033859	ENSG00000249695	LOC574538	-	uncharacterized LOC574538	ncRNA	26.24	3.4	7.717647059	9.95E-12
chr12-679	chr12	320003	323658	+	49.9	3655	"intron (NM_001122848, intron 1 of 15)"	Plat_L3|LINE|CR1	783	NM_003044	6539	Hs.437174	NM_003044	ENSG00000111181	SLC6A12	BGT-1|BGT1|GAT2	solute carrier family 6 member 12	protein-coding	49.93	9.71	5.142121524	6.34E-16
chr12-680	chr12	336729	339367	+	46.7	2638	"intron (NM_016615, intron 7 of 14)"	MER5B|DNA|hAT-Charlie	-14677	NM_001122848	6539	Hs.437174	NM_003044	ENSG00000111181	SLC6A12	BGT-1|BGT1|GAT2	solute carrier family 6 member 12	protein-coding	46.73	3.88	12.04381443	3.15E-26
chr12-681	chr12	641229	642229	+	17.9	1000	"intron (NM_173593, intron 1 of 19)"	MER31B|LTR|ERV1	53923	NR_134624	105369595	Hs.504422	NR_134624		LOC105369595	-	uncharacterized LOC105369595	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr12-692	chr12	2707784	2709416	+	25	1632	"intron (NM_001129830, intron 21 of 47)"	L3|LINE|CR1	72786	NR_046579	100874235	Hs.667644	NR_046579	ENSG00000256271	CACNA1C-AS2	-	CACNA1C antisense RNA 2	ncRNA	24.96	4.85	5.146391753	2.27E-08
chr12-693	chr12	3077322	3078866	+	27.5	1544	"intron (NM_201443, intron 1 of 10)"	AluJr4|SINE|Alu	9346	NM_201443	7004	Hs.94865	NM_003213	ENSG00000197905	TEAD4	EFTR-2|RTEF1|TCF13L1|TEF-3|TEF3|TEFR-1|hRTEF-1B	TEA domain transcription factor 4	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr12-698	chr12	3398884	3400144	+	20.5	1260	Intergenic	MER47A|DNA|TcMar-Tigger	-91001	NM_001256536	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	20.48	1.46	14.02739726	1.29E-13
chr12-702	chr12	4028065	4031897	+	69.8	3832	Intergenic	Intergenic	-47367	NM_001286521	57097	Hs.657268	NM_020367	ENSG00000111224	PARP11	ARTD11|C12orf6|MIB006	poly(ADP-ribose) polymerase family member 11	protein-coding	69.77	15.05	4.635880399	2.66E-19
chr12-708	chr12	4418576	4419576	+	17.9	1000	Intergenic	MIRb|SINE|MIR	-11283	NM_020375	57103	Hs.504545	NM_020375	ENSG00000078237	TIGAR	C12orf5|FR2BP	TP53 induced glycolysis regulatory phosphatase	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr12-714	chr12	5972140	5973140	+	17.9	1000	"intron (NM_001278596, intron 3 of 25)"	MIR|SINE|MIR	81785	NM_001278596	57101	Hs.148970	NM_020373	ENSG00000047617	ANO2	C12orf3|TMEM16B	anoctamin 2	protein-coding	17.92	0	18.4597065	9.96E-18
chr12-719	chr12	6294768	6295768	+	18.6	1000	Intergenic	Intergenic	-13605	NM_001330312	928	Hs.114286	NM_001769	ENSG00000010278	CD9	BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29	CD9 molecule	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr12-725	chr12	13682327	13683845	+	25	1518	Intergenic	Intergenic	-153407	NR_036555	283422	Hs.448717	NM_182558	ENSG00000180861	LINC01559	C12orf36	long intergenic non-protein coding RNA 1559	ncRNA	24.96	4.85	5.146391753	2.27E-08
chr12-726	chr12	15985923	15986923	+	17.9	1000	Intergenic	Intergenic	-43913	NM_004447	2059	Hs.591160	NM_004447	ENSG00000151491	EPS8	DFNB102	epidermal growth factor receptor pathway substrate 8	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr12-727	chr12	19032327	19033327	+	18.6	1000	Intergenic	Intergenic	141782	NM_033328	93661	Hs.131288	NM_033328	ENSG00000177938	CAPZA3	CAPPA3|Gsg3|HEL-S-86	capping actin protein of muscle Z-line alpha subunit 3	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr12-728	chr12	26111915	26113452	+	33.3	1537	promoter-TSS (NR_038228)	promoter-TSS (NR_038228)	-308	NR_038228	100506451	Hs.560092	NR_038227		RASSF8-AS1	-	RASSF8 atnisense RNA 1	ncRNA	33.28	5.34	6.232209738	6.04E-13
chr12-730	chr12	27253020	27254020	+	16.6	1000	Intergenic	MER4B|LTR|ERV1	-18065	NM_001080406	728858	Hs.334003	NM_001080406	ENSG00000214700	C12orf71	-	chromosome 12 open reading frame 71	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr12-731	chr12	29888585	29889585	+	18.6	1000	"intron (NM_175861, intron 5 of 17)"	"intron (NM_175861, intron 5 of 17)"	47658	NM_001193451	83857	Hs.401954	NM_175861	ENSG00000133687	TMTC1	ARG99|OLF|TMTC1A	transmembrane and tetratricopeptide repeat containing 1	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr12-734	chr12	31370019	31371019	+	17.3	1000	Intergenic	Intergenic	-106731	NR_026806	79857	Hs.534485	NM_024799	ENSG00000177340	FLJ13224	-	uncharacterized LOC79857	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr12-739	chr12	48574599	48575599	+	17.9	1000	Intergenic	Intergenic	-2267	NM_001013635	387856	Hs.251699	NM_001013635	ENSG00000177875	CCDC184	C12orf68	coiled-coil domain containing 184	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr12-746	chr12	52528840	52530522	+	28.2	1682	Intergenic	AluY|SINE|Alu	42328	NR_120440	26628	Hs.524431	NR_120437	ENSG00000257542	OR7E47P	OR7E141	olfactory receptor family 7 subfamily E member 47 pseudogene	pseudo	28.16	2.91	9.676975945	7.24E-15
chr12-748	chr12	52853824	52854824	+	18.6	1000	Intergenic	L1MC3|LINE|L1	-8414	NM_005555	3854	Hs.708950	NM_005555	ENSG00000185479	KRT6B	CK-6B|CK6B|K6B|KRTL1|PC2|PC4	keratin 6B	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr12-751	chr12	53283719	53284719	+	17.3	1000	Intergenic	Intergenic	14649	NM_002273	3856	Hs.533782	NM_002273	ENSG00000170421	KRT8	CARD2|CK-8|CK8|CYK8|K2C8|K8|KO	keratin 8	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr12-754	chr12	54070896	54072229	+	19.8	1333	Intergenic	L2a|LINE|L2	-1050	NM_001002031	517	Hs.524464	NM_005176	ENSG00000135390	ATP5G2	ATP5A	"ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9)"	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr12-768	chr12	54598814	54599814	+	17.9	1000	Intergenic	Intergenic	-16536	NR_045039	23583	Hs.632721	NM_014311	ENSG00000123415	SMUG1	FDG|HMUDG|UNG3	single-strand-selective monofunctional uracil-DNA glycosylase 1	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr12-771	chr12	57518673	57522337	+	62.1	3664	Intergenic	Intergenic	-1777	NM_002332	4035	Hs.162757	NM_002332	ENSG00000123384	LRP1	A2MR|APOER|APR|CD91|IGFBP3R|KPA|LRP|LRP1A|TGFBR5	LDL receptor related protein 1	protein-coding	62.09	9.22	6.734273319	1.02E-23
chr12-773	chr12	57573406	57576349	+	47.4	2943	"intron (NM_002332, intron 33 of 88)"	"intron (NM_002332, intron 33 of 88)"	-13410	NR_031597	100302201		NR_031597	ENSG00000221365	MIR1228	MIRN1228|hsa-mir-1228|mir-1228	microRNA 1228	ncRNA	47.37	7.77	6.096525097	1.86E-17
chr12-774	chr12	57580267	57581267	+	18.6	1000	"intron (NM_002332, intron 41 of 88)"	"intron (NM_002332, intron 41 of 88)"	-7520	NR_031597	100302201		NR_031597	ENSG00000221365	MIR1228	MIRN1228|hsa-mir-1228|mir-1228	microRNA 1228	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr12-779	chr12	66260367	66261367	+	18.6	1000	"intron (NM_001292023, intron 1 of 2)"	"intron (NM_001292023, intron 1 of 2)"	14491	NR_120478	100129940	Hs.685856	NM_001292023	ENSG00000197301	LOC100129940	-	uncharacterized LOC100129940	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr12-781	chr12	72431465	72432465	+	18.6	1000	Intergenic	AluY|SINE|Alu	99339	NM_173353	121278	Hs.736576	NM_173353	ENSG00000139287	TPH2	ADHD7|NTPH	tryptophan hydroxylase 2	protein-coding	18.56	0.49	37.87755102	9.96E-18
chr12-785	chr12	96516105	96517105	+	18.6	1000	Intergenic	Intergenic	-71555	NM_005230	2004	Hs.46523	NM_005230	ENSG00000111145	ELK3	ERP|NET|SAP-2|SAP2	"ELK3, ETS transcription factor"	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr12-788	chr12	105957384	105958650	+	22.4	1266	Intergenic	Intergenic	-139964	NR_110108	101929110	Hs.145944	NR_110108	ENSG00000257859	CASC18	-	cancer susceptibility candidate 18 (non-protein coding)	ncRNA	22.4	0.97	23.09278351	1.19E-17
chr12-789	chr12	106136857	106137857	+	17.9	1000	"non-coding (NR_110111, exon 2 of 2)"	"non-coding (NR_110111, exon 2 of 2)"	36805	NR_110111	101929110	Hs.145944	NR_110108	ENSG00000257859	CASC18	-	cancer susceptibility candidate 18 (non-protein coding)	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr12-790	chr12	106505362	106506362	+	17.9	1000	"intron (NM_014840, intron 1 of 6)"	L3|LINE|CR1	27949	NM_014840	9891	Hs.524692	NM_014840	ENSG00000074590	NUAK1	ARK5	NUAK family kinase 1	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr12-791	chr12	108240150	108241150	+	17.9	1000	Intergenic	Intergenic	56898	NR_037629	728739	Hs.741995	NR_037629		LOC728739	-	programmed cell death 2 pseudogene	pseudo	17.92	2.43	7.374485597	1.53E-08
chr12-798	chr12	113294830	113295830	+	18.6	1000	"intron (NR_145127, intron 5 of 22)"	MLT1D|LTR|ERVL-MaLR	-49252	NM_016816	4938	Hs.524760	NM_002534	ENSG00000089127	OAS1	E18/E16|IFI-4|OIAS|OIASI	2'-5'-oligoadenylate synthetase 1	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr12-800	chr12	113312935	113314343	+	21.8	1408	"intron (NR_145127, intron 13 of 22)"	"intron (NR_145127, intron 13 of 22)"	-30943	NM_016816	4938	Hs.524760	NM_002534	ENSG00000089127	OAS1	E18/E16|IFI-4|OIAS|OIASI	2'-5'-oligoadenylate synthetase 1	protein-coding	21.76	4.37	4.979405034	1.32E-07
chr12-801	chr12	113571256	113572256	+	17.3	1000	"intron (NM_004658, intron 2 of 21)"	"intron (NM_004658, intron 2 of 21)"	1648	NM_001301202	8437	Hs.528693	NM_004658	ENSG00000111344	RASAL1	RASAL	RAS protein activator like 1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr12-804	chr12	114529440	114530694	+	21.8	1254	Intergenic	MER9a1|LTR|ERVK	-125891	NM_001146699	9904	Hs.7482	NM_016196	ENSG00000122965	RBM19	-	RNA binding motif protein 19	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr12-806	chr12	116945302	116947360	+	33.9	2058	Intergenic	CpG	-24896	NR_027345	100287569	Hs.441601	NM_207436	ENSG00000196668	LINC00173	NCRNA00173	long intergenic non-protein coding RNA 173	ncRNA	33.92	3.88	8.742268041	4.55E-16
chr12-813	chr12	125926641	125928031	+	21.8	1390	"intron (NM_052907, intron 3 of 8)"	"intron (NM_052907, intron 3 of 8)"	116174	NM_052907	114795	Hs.524838	NM_052907	ENSG00000139364	TMEM132B	-	transmembrane protein 132B	protein-coding	21.76	3.4	6.4	3.73E-09
chr12-814	chr12	125940597	125941851	+	18.6	1254	"intron (NM_052907, intron 3 of 8)"	L2c|LINE|L2	130062	NM_052907	114795	Hs.524838	NM_052907	ENSG00000139364	TMEM132B	-	transmembrane protein 132B	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr12-816	chr12	132848072	132849072	+	18.6	1000	"intron (NM_001122636, intron 2 of 10)"	CpG	-3405	NR_024563	100130238	Hs.536338	NR_024563		LOC100130238	-	uncharacterized LOC100130238	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr12-821	chr12	1636507	1639691	+	43.5	3184	Intergenic	Intergenic	28442	NR_028415	100292680	Hs.391695	NR_028415		LINC00942	-	long intergenic non-protein coding RNA 942	ncRNA	43.53	7.77	5.602316602	3.96E-15
chr12-822	chr12	2153916	2154916	+	17.9	1000	Intergenic	Intergenic	-3102	NR_046768	100874369	Hs.208723	NR_046768	ENSG00000256257	CACNA1C-IT2	-	CACNA1C intronic transcript 2	ncRNA	17.92	1.46	12.2739726	2.41E-11
chr12-824	chr12	2237243	2238496	+	23	1253	"intron (NM_001129830, intron 3 of 47)"	AluY|SINE|Alu	75418	NM_199460	775	Hs.118262	NM_000719	ENSG00000151067	CACNA1C	CACH2|CACN2|CACNL1A1|CCHL1A1|CaV1.2|LQT8|TS	calcium voltage-gated channel subunit alpha1 C	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr12-826	chr12	2262508	2263508	+	17.9	1000	"intron (NM_001129830, intron 3 of 47)"	MIRc|SINE|MIR	69639	NR_046578	100874234	Hs.372570	NR_046578	ENSG00000256025	CACNA1C-AS4	-	CACNA1C antisense RNA 4	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr12-832	chr12	3266787	3268132	+	21.8	1345	"intron (NM_006675, intron 2 of 8)"	"intron (NM_006675, intron 2 of 8)"	80938	NM_006675	10867	Hs.504517	NM_006675	ENSG00000011105	TSPAN9	NET-5|NET5|PP1057	tetraspanin 9	protein-coding	21.76	0.97	22.43298969	1.19E-17
chr12-835	chr12	3430148	3433297	+	41.6	3149	Intergenic	L1MC5|LINE|L1	-58793	NM_001256536	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	41.61	5.82	7.149484536	5.30E-17
chr12-836	chr12	3437915	3439170	+	19.2	1255	Intergenic	Intergenic	-51973	NM_001256536	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr12-837	chr12	3524285	3525285	+	17.9	1000	"intron (NM_001256536, intron 1 of 9)"	MER21B|LTR|ERVL	34270	NM_001256536	56341	Hs.504530	NM_019854	ENSG00000111218	PRMT8	HRMT1L3|HRMT1L4	protein arginine methyltransferase 8	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr12-840	chr12	3603131	3605355	+	37.8	2224	"intron (NM_019854, intron 1 of 9)"	"intron (NM_019854, intron 1 of 9)"	-2258	NR_126055	100129223	Hs.586788	NR_126055		THCAT155	-	thyroid cancer-associated transcript 155	ncRNA	37.76	5.34	7.071161049	1.96E-15
chr12-844	chr12	4163425	4164425	+	17.9	1000	Intergenic	Intergenic	-181311	NM_001286521	57097	Hs.657268	NM_020367	ENSG00000111224	PARP11	ARTD11|C12orf6|MIB006	poly(ADP-ribose) polymerase family member 11	protein-coding	17.92	0	18.4597065	9.96E-18
chr12-845	chr12	4195110	4196110	+	17.3	1000	Intergenic	Intergenic	-187292	NM_001759	894	Hs.376071	NM_001759	ENSG00000118971	CCND2	KIAK0002|MPPH3	cyclin D2	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr12-846	chr12	4240041	4241921	+	31.4	1880	Intergenic	L1ME3E|LINE|L1	-141921	NM_001759	894	Hs.376071	NM_001759	ENSG00000118971	CCND2	KIAK0002|MPPH3	cyclin D2	protein-coding	31.36	7.28	4.307692308	9.24E-09
chr12-847	chr12	4303659	4307347	+	43.5	3688	Intergenic	MIR|SINE|MIR	-77399	NM_001759	894	Hs.376071	NM_001759	ENSG00000118971	CCND2	KIAK0002|MPPH3	cyclin D2	protein-coding	43.53	10.68	4.075842697	2.22E-11
chr12-857	chr12	5699180	5700180	+	16.6	1000	"intron (NM_001278596, intron 21 of 25)"	"intron (NM_001278596, intron 21 of 25)"	96382	NM_002527	4908	Hs.99171	NM_002527	ENSG00000185652	NTF3	HDNF|NGF-2|NGF2|NT-3|NT3	neurotrophin 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr12-86	chr12	30932134	30933646	+	30.1	1512	"non-coding (NR_135046, exon 2 of 2)"	"non-coding (NR_135046, exon 2 of 2)"	-15725	NR_040245	100287314	Hs.355210	NR_040245	ENSG00000235884	LINC00941	-	long intergenic non-protein coding RNA 941	ncRNA	30.08	5.82	5.16838488	6.85E-10
chr12-860	chr12	6052824	6055359	+	42.2	2535	"intron (NM_001278597, intron 1 of 25)"	"intron (NM_001278597, intron 1 of 25)"	334	NM_001278596	57101	Hs.148970	NM_020373	ENSG00000047617	ANO2	C12orf3|TMEM16B	anoctamin 2	protein-coding	42.25	5.34	7.911985019	5.94E-19
chr12-867	chr12	6425876	6426876	+	17.9	1000	"intron (NM_001144856, intron 7 of 15)"	"intron (NM_001144856, intron 7 of 15)"	4559	NM_001144857	55200	Hs.631660	NM_018173	ENSG00000008323	PLEKHG6	MyoGEF	pleckstrin homology and RhoGEF domain containing G6	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr12-87	chr12	45269033	45271428	+	48	2395	promoter-TSS (NM_001145109)	promoter-TSS (NM_001145109)	17	NM_001145108	4753	Hs.505326	NM_006159	ENSG00000184613	NELL2	NRP2	neural EGFL like 2	protein-coding	48.01	3.88	12.37371134	2.57E-27
chr12-874	chr12	13155990	13156990	+	17.3	1000	"non-coding (NR_002774, exon 1 of 1)"	"non-coding (NR_002774, exon 1 of 1)"	3114	NR_002774	93164	Hs.593282	NR_002774	ENSG00000183935	HTR7P1	HTR7P	5-hydroxytryptamine receptor 7 pseudogene 1	pseudo	17.28	2.91	5.93814433	8.60E-07
chr12-875	chr12	13285319	13286319	+	16	1000	Intergenic	L1ME1|LINE|L1	-29189	NM_001206842	83445	Hs.240053	NM_031289	ENSG00000111305	GSG1	-	germ cell associated 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr12-877	chr12	13542103	13543103	+	16.6	1000	Intergenic	MER1A|DNA|hAT-Charlie	-12924	NR_036555	283422	Hs.448717	NM_182558	ENSG00000180861	LINC01559	C12orf36	long intergenic non-protein coding RNA 1559	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr12-881	chr12	15305160	15306160	+	17.9	1000	"intron (NR_046559, intron 1 of 2)"	"intron (NR_046559, intron 1 of 2)"	803	NR_046559	100873980	Hs.569154	NR_046559	ENSG00000255660	RERG-AS1	-	RERG antisense RNA 1	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr12-882	chr12	15920521	15921521	+	17.9	1000	"intron (NM_004447, intron 1 of 20)"	"intron (NM_004447, intron 1 of 20)"	21489	NM_004447	2059	Hs.591160	NM_004447	ENSG00000151491	EPS8	DFNB102	epidermal growth factor receptor pathway substrate 8	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr12-891	chr12	31482625	31483625	+	17.9	1000	Intergenic	Intergenic	-3966	NM_001135812	58516	Hs.505154	NM_021238	ENSG00000139146	FAM60A	C12orf14|L4|TERA	family with sequence similarity 60 member A	protein-coding	17.92	0	18.4597065	9.96E-18
chr12-894	chr12	32768371	32769371	+	16.6	1000	"intron (NM_001330374, intron 9 of 15)"	MER74A|LTR|ERVL	-63263	NM_001330380	10059	Hs.556296	NM_005690	ENSG00000087470	DNM1L	DLP1|DRP1|DVLP|DYMPLE|EMPF|EMPF1|HDYNIV	dynamin 1 like	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr12-896	chr12	42997330	42998330	+	17.9	1000	Intergenic	Intergenic	-14258	NM_153026	144165	Hs.524348	NM_153026	ENSG00000139174	PRICKLE1	EPM1B|RILP	prickle planar cell polarity protein 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr12-903	chr12	49362854	49368035	+	110.7	5181	"5' UTR (NM_003394, exon 1 of 5)"	"5' UTR (NM_003394, exon 1 of 5)"	197	NM_003394	7480	Hs.91985	NM_003394	ENSG00000169884	WNT10B	SHFM6|STHAG8|WNT-12	Wnt family member 10B	protein-coding	110.73	15.53	7.130070831	4.29E-43
chr12-907	chr12	52427315	52432084	+	65.3	4769	"intron (NM_001202233, intron 1 of 7)"	"intron (NM_001202233, intron 1 of 7)"	-1800	NM_001202234	3164	Hs.524430	NM_002135	ENSG00000123358	NR4A1	GFRP1|HMR|N10|NAK-1|NGFIB|NP10|NUR77|TR3	nuclear receptor subfamily 4 group A member 1	protein-coding	65.29	15.05	4.33820598	2.48E-17
chr12-908	chr12	52443377	52444377	+	17.9	1000	"intron (NM_001202234, intron 2 of 7)"	"intron (NM_001202234, intron 2 of 7)"	-1309	NM_173157	3164	Hs.524430	NM_002135	ENSG00000123358	NR4A1	GFRP1|HMR|N10|NAK-1|NGFIB|NP10|NUR77|TR3	nuclear receptor subfamily 4 group A member 1	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr12-909	chr12	52543062	52545823	+	37.1	2761	Intergenic	L3|LINE|CR1	41342	NM_182507	144501	Hs.140978	NM_182507	ENSG00000167767	KRT80	KB20	keratin 80	protein-coding	37.12	7.28	5.098901099	3.68E-12
chr12-910	chr12	52641601	52644810	+	58.9	3209	TTS (NM_005556)	TTS (NM_005556)	16251	NM_005556	3855	Hs.411501	NM_005556	ENSG00000135480	KRT7	CK7|K2C7|K7|SCL	keratin 7	protein-coding	58.89	7.77	7.579150579	5.01E-25
chr12-912	chr12	52650113	52651113	+	17.3	1000	Intergenic	Intergenic	-17816	NM_001320198	3892	Hs.278658	NM_002284	ENSG00000170442	KRT86	HB6|Hb1|K86|KRTHB1|KRTHB6|MNX	keratin 86	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr12-913	chr12	52667988	52668988	+	17.3	1000	promoter-TSS (NM_001320198)	promoter-TSS (NM_001320198)	59	NM_001320198	3892	Hs.278658	NM_002284	ENSG00000170442	KRT86	HB6|Hb1|K86|KRTHB1|KRTHB6|MNX	keratin 86	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr12-915	chr12	52761095	52762710	+	26.9	1615	promoter-TSS (NM_002283)	promoter-TSS (NM_002283)	-593	NM_002283	3891	Hs.182507	NM_002283	ENSG00000135443	KRT85	ECTD4|HB5|Hb-5|K85|KRTHB5|hHb5	keratin 85	protein-coding	26.88	4.85	5.542268041	7.61E-10
chr12-922	chr12	54192738	54193738	+	17.9	1000	Intergenic	Intergenic	-42420	NR_104332	102216268	Hs.742074	NR_104332	ENSG00000260492	CISTR	CISTR-ACT|CISTRACT|re52431	chondrogenesis-associated transcript	ncRNA	17.92	2.43	7.374485597	1.53E-08
chr12-933	chr12	54428057	54429932	+	32.6	1875	"non-coding (NR_003084, exon 2 of 2)"	"non-coding (NR_003084, exon 2 of 2)"	1260	NR_030753	693200		NR_030753	ENSG00000207571	MIR615	MIRN615|hsa-mir-615|mir-615	microRNA 615	ncRNA	32.64	4.37	7.469107551	5.18E-14
chr12-935	chr12	54431966	54435174	+	59.5	3208	"intron (NM_014620, intron 1 of 3)"	"intron (NM_014620, intron 1 of 3)"	5836	NR_030753	693200		NR_030753	ENSG00000207571	MIR615	MIRN615|hsa-mir-615|mir-615	microRNA 615	ncRNA	59.53	8.74	6.811212815	5.39E-23
chr12-943	chr12	55571960	55572960	+	17.3	1000	Intergenic	L1M4c|LINE|L1	-42349	NM_001005280	121364	Hs.554557	NM_001005280	ENSG00000179919	OR10A7	OR12-6	olfactory receptor family 10 subfamily A member 7	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr12-944	chr12	56034251	56035609	+	17.9	1358	Intergenic	Intergenic	4254	NM_206899	121130	Hs.554551	NM_206899	ENSG00000175398	OR10P1	OR10P1P|OR10P2P|OR10P3P|OR12-7|OST701	olfactory receptor family 10 subfamily P member 1	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr12-951	chr12	58012839	58015856	+	58.9	3017	"intron (NR_120450, intron 1 of 3)"	"intron (NR_120450, intron 1 of 3)"	654	NM_133489	65012	Hs.727726	NM_133489	ENSG00000135502	SLC26A10	-	solute carrier family 26 member 10	protein-coding	58.89	11.65	5.054935622	3.28E-18
chr12-953	chr12	59712466	59713466	+	17.9	1000	Intergenic	L1MEf|LINE|L1	-276855	NM_001270622	9194	Hs.88156	NM_004731	ENSG00000118596	SLC16A7	MCT2	solute carrier family 16 member 7	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr12-957	chr12	67633553	67634553	+	16.6	1000	Intergenic	Intergenic	-29008	NM_001329674	55832	Hs.546407	NM_018448	ENSG00000111530	CAND1	TIP120|TIP120A	cullin associated and neddylation dissociated 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr12-958	chr12	68152950	68155098	+	32.6	2148	Intergenic	LTR25|LTR|ERV1	-30769	NR_110063	101927901	Hs.369609	NR_110063	ENSG00000255970	LOC101927901	-	uncharacterized LOC101927901	ncRNA	32.64	5.82	5.608247423	2.32E-11
chr12-959	chr12	70041578	70043118	+	25.6	1540	"intron (NM_001282614, intron 9 of 9)"	"intron (NM_001282614, intron 9 of 9)"	-37406	NM_201550	376132	Hs.448708	NM_201550	ENSG00000198812	LRRC10	HRLRRP|LRRC10A	leucine rich repeat containing 10	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr12-960	chr12	70273475	70274475	+	17.3	1000	"intron (NM_182530, intron 4 of 24)"	"intron (NM_182530, intron 4 of 24)"	54872	NM_182530	196446	Hs.253773	NM_182530	ENSG00000166268	MYRFL	C12orf15|C12orf28|bcm1377	myelin regulatory factor-like	protein-coding	17.28	0.49	35.26530612	3.68E-16
chr12-967	chr12	104673777	104674777	+	16	1000	"intron (NM_001093771, intron 3 of 16)"	L2a|LINE|L2	-6183	NM_182742	7296	Hs.654922	NM_003330	ENSG00000198431	TXNRD1	GRIM-12|TR|TR1|TRXR1|TXNR	thioredoxin reductase 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr12-969	chr12	105950588	105951588	+	17.9	1000	Intergenic	Intergenic	-146893	NR_110108	101929110	Hs.145944	NR_110108	ENSG00000257859	CASC18	-	cancer susceptibility candidate 18 (non-protein coding)	ncRNA	17.92	0	18.4597065	9.96E-18
chr12-976	chr12	106971052	106972052	+	16	1000	"intron (NR_040246, intron 1 of 3)"	L2b|LINE|L2	-5133	NM_213594	5992	Hs.388827	NM_002920	ENSG00000111783	RFX4	NYD-SP10	regulatory factor X4	protein-coding	16	2.91	5.498281787	4.98E-06
chr12-978	chr12	108159669	108161161	+	25.6	1492	Intergenic	AluJb|SINE|Alu	-5501	NM_012406	11108	Hs.506655	NM_012406	ENSG00000110851	PRDM4	PFM1	PR/SET domain 4	protein-coding	25.6	5.82	4.39862543	7.99E-08
chr12-979	chr12	108253174	108254174	+	17.3	1000	Intergenic	L1ME1|LINE|L1	43874	NR_037629	728739	Hs.741995	NR_037629		LOC728739	-	programmed cell death 2 pseudogene	pseudo	17.28	3.88	4.453608247	1.81E-05
chr12-985	chr12	109794204	109795204	+	17.9	1000	"intron (NR_120462, intron 2 of 2)"	"intron (NR_120462, intron 2 of 2)"	2589	NR_120462	101928138	Hs.143843	NR_120462	ENSG00000256560	LINC01486	-	long intergenic non-protein coding RNA 1486	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr12-986	chr12	111474955	111476219	+	20.5	1264	"intron (NM_015267, intron 1 of 21)"	"intron (NM_015267, intron 1 of 21)"	3759	NM_015267	23316	Hs.124953	NM_015267	ENSG00000111249	CUX2	CDP2|CUTL2	cut like homeobox 2	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr12-989	chr12	111527016	111528716	+	26.9	1700	"intron (NM_015267, intron 1 of 21)"	L2c|LINE|L2	56038	NM_015267	23316	Hs.124953	NM_015267	ENSG00000111249	CUX2	CDP2|CUTL2	cut like homeobox 2	protein-coding	26.88	1.94	13.8556701	2.90E-17
chr12-990	chr12	111619681	111621188	+	25	1507	"intron (NM_015267, intron 1 of 21)"	"intron (NM_015267, intron 1 of 21)"	-121512	NR_106818	102465455		NR_106818	ENSG00000273700	MIR6760	hsa-mir-6760	microRNA 6760	ncRNA	24.96	4.37	5.711670481	4.38E-09
chr12-991	chr12	111632883	111633883	+	16.6	1000	"intron (NM_015267, intron 1 of 21)"	MIRb|SINE|MIR	-108563	NR_106818	102465455		NR_106818	ENSG00000273700	MIR6760	hsa-mir-6760	microRNA 6760	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr12-992	chr12	112204145	112205145	+	16	1000	promoter-TSS (NM_001204889)	promoter-TSS (NM_001204889)	-46	NM_001204889	217	Hs.604551	NM_000690	ENSG00000111275	ALDH2	ALDH-E2|ALDHI|ALDM	aldehyde dehydrogenase 2 family (mitochondrial)	protein-coding	16	3.88	4.12371134	7.91E-05
chr12-993	chr12	113304152	113305413	+	25	1261	"intron (NR_145127, intron 7 of 22)"	"intron (NR_145127, intron 7 of 22)"	-39800	NM_016816	4938	Hs.524760	NM_002534	ENSG00000089127	OAS1	E18/E16|IFI-4|OIAS|OIASI	2'-5'-oligoadenylate synthetase 1	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr12-995	chr12	113852437	113853437	+	17.3	1000	Intergenic	L2a|LINE|L2	-7258	NM_001304993	113675	Hs.337594	NM_138432	ENSG00000139410	SDSL	SDH 2|SDS-RS1|TDH|cSDH	serine dehydratase like	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr12-999	chr12	114831457	114833047	+	25	1590	"intron (NM_080717, intron 5 of 7)"	"intron (NM_080717, intron 5 of 7)"	11716	NM_181486	6910	Hs.381715	NM_000192	ENSG00000089225	TBX5	HOS	T-box 5	protein-coding	24.96	2.91	8.577319588	5.77E-12
chr13-1000	chr13	27088843	27089843	+	13.4	1000	Intergenic	Intergenic	-42497	NM_006646	10810	Hs.618732	NM_006646	ENSG00000132970	WASF3	Brush-1|SCAR3|WAVE3	WAS protein family member 3	protein-coding	13.44	2.43	5.530864198	2.99E-05
chr13-1003	chr13	27383726	27384726	+	14.1	1000	Intergenic	Intergenic	-49304	NM_005288	2835	Hs.123034	NM_005288	ENSG00000132975	GPR12	GPCR12|GPCR21|PPP1R84	G protein-coupled receptor 12	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr13-1005	chr13	27433490	27434490	+	14.1	1000	Intergenic	Intergenic	-99068	NM_005288	2835	Hs.123034	NM_005288	ENSG00000132975	GPR12	GPCR12|GPCR21|PPP1R84	G protein-coupled receptor 12	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr13-1007	chr13	27909443	27910443	+	15.4	1000	Intergenic	Intergenic	64629	NM_001331126	387496	Hs.192131	NM_206827	ENSG00000122035	RASL11A	-	RAS like family 11 member A	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr13-1009	chr13	27986870	27987870	+	14.7	1000	Intergenic	Intergenic	-11311	NM_002097	2971	Hs.445977	NM_002097	ENSG00000122034	GTF3A	AP2|TFIIIA	general transcription factor IIIA	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr13-1020	chr13	28553690	28555719	+	28.2	2029	"intron (NM_001105577, intron 1 of 1)"	CpG	8070	NM_001105577	646625	Hs.705356	NM_001105577	ENSG00000183463	URAD	PRHOXNB	ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr13-1024	chr13	29115809	29116809	+	14.7	1000	Intergenic	L1MB2|LINE|L1	-47044	NM_001160030	2321	Hs.594454	NM_002019	ENSG00000102755	FLT1	FLT|FLT-1|VEGFR-1|VEGFR1	fms related tyrosine kinase 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr13-1026	chr13	29372997	29373997	+	14.1	1000	Intergenic	Intergenic	-80347	NM_001135919	283537	Hs.117167	NM_181785	ENSG00000139508	SLC46A3	FKSG16	solute carrier family 46 member 3	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr13-1029	chr13	29576947	29577947	+	15.4	1000	Intergenic	MIR|SINE|MIR	-21301	NM_001033602	23281	Hs.22287	NM_015233	ENSG00000132938	MTUS2	CAZIP|ICIS|KIAA0774|TIP150	microtubule associated tumor suppressor candidate 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr13-1032	chr13	30442566	30443566	+	14.7	1000	Intergenic	Intergenic	-18246	NM_007106	5412	Hs.145575	NM_007106	ENSG00000122042	UBL3	HCG-1|PNSC1	ubiquitin like 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr13-1039	chr13	31496809	31497809	+	14.7	1000	"intron (NM_032849, intron 4 of 4)"	AluSz|SINE|Alu	9436	NR_038288	100507064	Hs.654878	NR_038287	ENSG00000224743	TEX26-AS1	LINC00447	TEX26 antisense RNA 1	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr13-1040	chr13	31505558	31506558	+	15.4	1000	promoter-TSS (NM_152325)	promoter-TSS (NM_152325)	687	NR_038288	100507064	Hs.654878	NR_038287	ENSG00000224743	TEX26-AS1	LINC00447	TEX26 antisense RNA 1	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr13-1043	chr13	31599372	31600372	+	14.7	1000	Intergenic	MIRb|SINE|MIR	93038	NM_152325	122046	Hs.124463	NM_152325	ENSG00000175664	TEX26	C13orf26	testis expressed 26	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr13-1044	chr13	31622368	31623368	+	14.7	1000	Intergenic	Intergenic	113290	NM_001286503	10808	Hs.743267	NM_006644	ENSG00000120694	HSPH1	HSP105|HSP105A|HSP105B|NY-CO-25	heat shock protein family H (Hsp110) member 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr13-1047	chr13	31690111	31691111	+	13.4	1000	Intergenic	Intergenic	45547	NM_001286503	10808	Hs.743267	NM_006644	ENSG00000120694	HSPH1	HSP105|HSP105A|HSP105B|NY-CO-25	heat shock protein family H (Hsp110) member 1	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr13-1048	chr13	31762363	31765176	+	33.9	2813	Intergenic	MER21C|LTR|ERVL	-10343	NM_194318	145173	Hs.13205	NM_194318	ENSG00000187676	B3GLCT	B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T	beta 3-glucosyltransferase	protein-coding	33.92	4.37	7.76201373	6.77E-15
chr13-1050	chr13	31966991	31967991	+	14.7	1000	Intergenic	Charlie3|DNA|hAT-Charlie	193379	NM_194318	145173	Hs.13205	NM_194318	ENSG00000187676	B3GLCT	B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T	beta 3-glucosyltransferase	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr13-1054	chr13	32608902	32609902	+	14.7	1000	"intron (NM_023037, intron 1 of 60)"	"intron (NM_023037, intron 1 of 60)"	-3626	NR_103839	100507099	Hs.536364	NR_103839		FRY-AS1	-	FRY antisense RNA 1	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr13-106	chr13	112913666	112915234	+	27.5	1568	"intron (NR_120422, intron 6 of 8)"	MIRb|SINE|MIR	12864	NR_120422	101928730	Hs.382313	NR_120422		LOC101928730	-	uncharacterized LOC101928730	ncRNA	27.52	1.94	14.18556701	2.90E-17
chr13-1061	chr13	35167359	35168359	+	14.1	1000	"intron (NR_047036, intron 1 of 2)"	"intron (NR_047036, intron 1 of 2)"	46963	NR_047036	100874179	Hs.569253	NR_047036	ENSG00000225179	LINC00457	-	long intergenic non-protein coding RNA 457	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr13-1062	chr13	35274711	35275711	+	15.4	1000	Intergenic	Intergenic	-60389	NR_047036	100874179	Hs.569253	NR_047036	ENSG00000225179	LINC00457	-	long intergenic non-protein coding RNA 457	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr13-1063	chr13	36453975	36454975	+	14.7	1000	"intron (NM_001330071, intron 4 of 16)"	"intron (NM_001330071, intron 4 of 16)"	-24477	NM_001195416	9201	Hs.507755	NM_004734	ENSG00000133083	DCLK1	CL1|CLICK1|DCAMKL1|DCDC3A|DCLK	doublecortin like kinase 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr13-1064	chr13	36877300	36878300	+	14.7	1000	"3' UTR (NM_015087, exon 9 of 9)"	"3' UTR (NM_015087, exon 9 of 9)"	-5808	NM_001144985	728591	Hs.656745	NM_001144981	ENSG00000242715	CCDC169	C13orf38	coiled-coil domain containing 169	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr13-1065	chr13	37492366	37496214	+	43.5	3848	"5' UTR (NM_001127217, exon 1 of 7)"	"5' UTR (NM_001127217, exon 1 of 7)"	119	NM_001127217	4093	Hs.123119	NM_005905	ENSG00000120693	SMAD9	MADH6|MADH9|PPH2|SMAD8|SMAD8/9|SMAD8A|SMAD8B	SMAD family member 9	protein-coding	43.53	6.8	6.401470588	8.79E-17
chr13-1066	chr13	37645025	37646025	+	14.1	1000	Intergenic	Intergenic	-11675	NM_001014286	55578	Hs.435815	NM_017569	ENSG00000102710	SUPT20H	C13|C13orf19|FAM48A|FP757|P38IP|SPT20	"SPT20 homolog, SAGA complex component"	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr13-1067	chr13	37672985	37673985	+	14.7	1000	Intergenic	Intergenic	6316	NM_145203	122011	Hs.512897	NM_145203	ENSG00000180138	CSNK1A1L	CK1	casein kinase 1 alpha 1 like	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr13-1068	chr13	39442583	39443583	+	15.4	1000	"intron (NM_207361, intron 16 of 23)"	"intron (NM_207361, intron 16 of 23)"	121913	NM_145286	161003	Hs.327794	NM_145286	ENSG00000133115	STOML3	Epb7.2l|SRO	stomatin like 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr13-107	chr13	112999199	113001272	+	38.4	2073	Intergenic	Intergenic	-14696	NR_126345	104266956		NR_126345	ENSG00000223626	LINC01044	-	long intergenic non-protein coding RNA 1044	ncRNA	38.4	6.31	6.085578447	1.96E-14
chr13-1072	chr13	40689851	40690851	+	14.7	1000	Intergenic	Intergenic	-65595	NR_046870	100874127	Hs.578028	NR_046870	ENSG00000230710	LINC00332	NCRNA00332	long intergenic non-protein coding RNA 332	ncRNA	14.72	0	15.16333034	3.99E-13
chr13-1074	chr13	40757590	40759113	+	25	1523	"intron (NR_046870, intron 1 of 3)"	L2c|LINE|L2	2405	NR_046870	100874127	Hs.578028	NR_046870	ENSG00000230710	LINC00332	NCRNA00332	long intergenic non-protein coding RNA 332	ncRNA	24.96	2.43	10.27160494	2.59E-13
chr13-1075	chr13	40766598	40767598	+	15.4	1000	Intergenic	Intergenic	11152	NR_046870	100874127	Hs.578028	NR_046870	ENSG00000230710	LINC00332	NCRNA00332	long intergenic non-protein coding RNA 332	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr13-1077	chr13	40952853	40953853	+	15.4	1000	"intron (NR_024506, intron 5 of 5)"	L1ME4a|LINE|L1	101790	NR_024505	646982	Hs.287664	NR_024505	ENSG00000215483	LINC00598	-	long intergenic non-protein coding RNA 598	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr13-1078	chr13	40963917	40964917	+	15.4	1000	"intron (NR_024506, intron 5 of 5)"	MER20B|DNA|hAT-Charlie	90726	NR_024505	646982	Hs.287664	NR_024505	ENSG00000215483	LINC00598	-	long intergenic non-protein coding RNA 598	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr13-1081	chr13	41136247	41137782	+	20.5	1535	"intron (NM_002015, intron 1 of 2)"	"intron (NM_002015, intron 1 of 2)"	-81871	NR_024506	646982	Hs.287664	NR_024505	ENSG00000215483	LINC00598	-	long intergenic non-protein coding RNA 598	ncRNA	20.48	2.43	8.427983539	2.25E-10
chr13-1084	chr13	41194186	41195186	+	15.4	1000	"intron (NM_002015, intron 1 of 2)"	"intron (NM_002015, intron 1 of 2)"	46048	NM_002015	2308	Hs.370666	NM_002015	ENSG00000150907	FOXO1	FKH1|FKHR|FOXO1A	forkhead box O1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr13-1086	chr13	41236679	41240559	+	64	3880	"intron (NM_002015, intron 1 of 2)"	CpG	2115	NM_002015	2308	Hs.370666	NM_002015	ENSG00000150907	FOXO1	FKH1|FKHR|FOXO1A	forkhead box O1	protein-coding	64.01	7.77	8.238095238	1.21E-28
chr13-1089	chr13	44558936	44559936	+	14.7	1000	Intergenic	Intergenic	-37035	NR_026955	121838	Hs.201441	NR_026955		LINC00284	NCRNA00284	long intergenic non-protein coding RNA 284	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr13-109	chr13	114608618	114611560	+	44.8	2942	"intron (NM_001278674, intron 3 of 7)"	Tigger13a|DNA|TcMar-Tigger	12013	NM_001278674	643365	Hs.127655	NM_001039767		LINC00452	LINC00453	long intergenic non-protein coding RNA 452	protein-coding	44.81	6.8	6.589705882	1.33E-17
chr13-1090	chr13	45322706	45324109	+	19.2	1403	Intergenic	Intergenic	60359	NR_038433	144817	Hs.585616	NR_038433	ENSG00000235097	LINC00330	NCRNA00330	long intergenic non-protein coding RNA 330	ncRNA	19.2	0.97	19.79381443	5.65E-15
chr13-1092	chr13	45467338	45468338	+	12.2	1000	Intergenic	Intergenic	-84072	NR_038433	144817	Hs.585616	NR_038433	ENSG00000235097	LINC00330	NCRNA00330	long intergenic non-protein coding RNA 330	ncRNA	12.16	1.94	6.268041237	3.02E-05
chr13-1094	chr13	46227830	46228830	+	15.4	1000	Intergenic	MSTB|LTR|ERVL-MaLR	-38456	NM_182542	220081	Hs.668747	NM_182542	ENSG00000165837	ERICH6B	FAM194B	glutamate rich 6B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr13-110	chr13	20702249	20703513	+	19.8	1264	Intergenic	CpG	26041	NR_126380	104355137	Hs.578016	NR_126380	ENSG00000236076	LINC01072	-	long intergenic non-protein coding RNA 1072	ncRNA	19.84	0.97	20.45360825	5.65E-15
chr13-1102	chr13	50397785	50398785	+	14.1	1000	Intergenic	MER66-int|LTR|ERV1	-31228	NM_002267	3839	Hs.527919	NM_002267	ENSG00000102753	KPNA3	IPOA4|SRP1|SRP1gamma|SRP4|hSRP1	karyopherin subunit alpha 3	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr13-1109	chr13	51843723	51844723	+	14.1	1000	"intron (NM_145019, intron 4 of 4)"	"intron (NM_145019, intron 4 of 4)"	47753	NM_145019	220108	Hs.71913	NM_145019	ENSG00000150510	FAM124A	-	family with sequence similarity 124 member A	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr13-111	chr13	24247723	24248723	+	19.2	1000	"3' UTR (NM_001204458, exon 10 of 10)"	"3' UTR (NM_001204458, exon 10 of 10)"	94724	NM_001204458	55504	Hs.149168	NM_018647	ENSG00000127863	TNFRSF19	TAJ|TAJ-alpha|TRADE|TROY	TNF receptor superfamily member 19	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr13-1113	chr13	52730627	52732883	+	32	2256	"intron (NR_027415, intron 1 of 15)"	L2b|LINE|L2	1915	NM_152720	4752	Hs.409989	NM_002498	ENSG00000136098	NEK3	HSPK36	NIMA related kinase 3	protein-coding	32	7.28	4.395604396	2.08E-09
chr13-1115	chr13	53478159	53482305	+	65.3	4146	Intergenic	Intergenic	-57457	NM_002590	5100	Hs.19492	NM_002590	ENSG00000136099	PCDH8	ARCADLIN|PAPC	protocadherin 8	protein-coding	65.29	7.77	8.402831403	1.44E-29
chr13-1116	chr13	53712673	53713673	+	14.1	1000	"intron (NR_125788, intron 4 of 4)"	"intron (NR_125788, intron 4 of 4)"	12862	NR_125788	102723875	Hs.149083	NR_125788		LINC01065	-	long intergenic non-protein coding RNA 1065	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr13-1117	chr13	59786043	59787043	+	12.8	1000	Intergenic	Intergenic	-800309	NR_046539	100874195	Hs.664101	NR_046539	ENSG00000227528	DIAPH3-AS1	-	DIAPH3 antisense RNA 1	ncRNA	12.8	0.49	26.12244898	1.16E-11
chr13-1118	chr13	60802919	60803919	+	15.4	1000	"intron (NR_047022, intron 1 of 2)"	"intron (NR_047022, intron 1 of 2)"	38819	NR_047022	100874169	Hs.171027	NR_047022		LINC00434	-	long intergenic non-protein coding RNA 434	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr13-1119	chr13	60892671	60893671	+	15.4	1000	Intergenic	Intergenic	-50933	NR_047022	100874169	Hs.171027	NR_047022		LINC00434	-	long intergenic non-protein coding RNA 434	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr13-1123	chr13	76520826	76521826	+	14.7	1000	Intergenic	Intergenic	70304	NR_126373	104326189	Hs.671216	NR_126373	ENSG00000223458	LMO7DN-IT1	C13orf45-IT1|TCONS_00021569	LMO7DN intronic transcript 1	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr13-1124	chr13	77459424	77460424	+	14.1	1000	"exon (NM_138444, exon 1 of 1)"	"exon (NM_138444, exon 1 of 1)"	616	NM_138444	115207	Hs.644125	NM_138444	ENSG00000178695	KCTD12	C13orf2|PFET1|PFETIN	potassium channel tetramerization domain containing 12	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr13-1126	chr13	78393102	78394102	+	14.7	1000	"intron (NR_103853, intron 1 of 6)"	"intron (NR_103853, intron 1 of 6)"	530	NR_103853	100505518	Hs.742215	NR_103853		EDNRB-AS1	-	EDNRB antisense RNA 1	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr13-1128	chr13	80231007	80232007	+	15.4	1000	Intergenic	MSTB|LTR|ERVL-MaLR	90645	NR_125772	103724388	Hs.434862	NR_125772	ENSG00000227676	LINC01068	-	long intergenic non-protein coding RNA 1068	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr13-113	chr13	24584010	24585267	+	21.1	1257	"intron (NM_001286792, intron 2 of 14)"	MER4A|LTR|ERV1	30873	NR_104595	221178	Hs.434298	NM_153023	ENSG00000182957	SPATA13	ARHGEF29|ASEF2	spermatogenesis associated 13	protein-coding	21.12	0.97	21.77319588	2.68E-16
chr13-1130	chr13	96046371	96047371	+	14.1	1000	Intergenic	LTR29|LTR|ERV1	-38982	NM_182848	9071	Hs.534377	NM_006984	ENSG00000134873	CLDN10	CPETRL3|OSP-L	claudin 10	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr13-1131	chr13	96295773	96296773	+	14.7	1000	"intron (NM_198968, intron 1 of 22)"	CpG	687	NM_014934	22873	Hs.656580	NM_014934	ENSG00000134874	DZIP1	DZIP|DZIPt1	DAZ interacting zinc finger protein 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr13-1133	chr13	97888016	97889016	+	15.4	1000	"intron (NM_001306070, intron 1 of 7)"	"intron (NM_001306070, intron 1 of 7)"	13966	NM_144778	10150	Hs.657347	NM_144778	ENSG00000139793	MBNL2	MBLL|MBLL39|PRO2032	muscleblind like splicing regulator 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr13-1134	chr13	98492150	98493150	+	15.4	1000	Intergenic	Intergenic	-113279	NM_002271	3843	Hs.712598	NM_002271	ENSG00000065150	IPO5	IMB3|KPNB3|Pse1|RANBP5|imp5	importin 5	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr13-1142	chr13	98922584	98923584	+	14.7	1000	"intron (NM_005766, intron 2 of 26)"	"intron (NM_005766, intron 2 of 26)"	62306	NR_036129	100422881		NR_036129	ENSG00000263399	MIR3170	mir-3170	microRNA 3170	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr13-1143	chr13	98954524	98956133	+	23.7	1609	"intron (NM_005766, intron 2 of 26)"	"intron (NM_005766, intron 2 of 26)"	94550	NR_036129	100422881		NR_036129	ENSG00000263399	MIR3170	mir-3170	microRNA 3170	ncRNA	23.68	1.94	12.20618557	6.71E-14
chr13-1144	chr13	99014515	99015515	+	14.7	1000	"intron (NM_005766, intron 3 of 26)"	L2|LINE|L2	154237	NR_036129	100422881		NR_036129	ENSG00000263399	MIR3170	mir-3170	microRNA 3170	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr13-1145	chr13	99034962	99035962	+	15.4	1000	"intron (NM_005766, intron 6 of 26)"	"intron (NM_005766, intron 6 of 26)"	138917	NM_003576	8428	Hs.508514	NM_003576	ENSG00000102572	STK24	HEL-S-95|MST3|MST3B|STE20|STK3	serine/threonine kinase 24	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr13-1146	chr13	99083148	99084148	+	14.7	1000	"intron (NM_005766, intron 18 of 26)"	"intron (NM_005766, intron 18 of 26)"	90731	NM_003576	8428	Hs.508514	NM_003576	ENSG00000102572	STK24	HEL-S-95|MST3|MST3B|STE20|STK3	serine/threonine kinase 24	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr13-1154	chr13	101773018	101774018	+	14.1	1000	"intron (NM_052867, intron 18 of 43)"	MIRc|SINE|MIR	-176900	NR_047015	100874161	Hs.143791	NR_047015		LINC00411	-	long intergenic non-protein coding RNA 411	ncRNA	14.08	0	14.5040551	3.99E-13
chr13-116	chr13	25945908	25949321	+	54.4	3413	"intron (NM_016529, intron 1 of 36)"	L2|LINE|L2	1465	NM_016529	51761	Hs.444957	NM_016529	ENSG00000132932	ATP8A2	ATP|ATPIB|CAMRQ4|IB|ML-1	ATPase phospholipid transporting 8A2	protein-coding	54.41	7.28	7.473901099	1.41E-22
chr13-1161	chr13	107012362	107013362	+	14.1	1000	Intergenic	LTR88a|LTR|Gypsy?	-16049	NR_034119	728192	Hs.559194	NR_034119		LINC00460	-	long intergenic non-protein coding RNA 460	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr13-1163	chr13	110776022	110777022	+	15.4	1000	Intergenic	Intergenic	70890	NR_126387	104355146	Hs.508690	NR_126387	ENSG00000231428	LINC00396	-	long intergenic non-protein coding RNA 396	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr13-1168	chr13	110873826	110874826	+	14.7	1000	"intron (NM_001303110, intron 2 of 24)"	"intron (NM_001303110, intron 2 of 24)"	85178	NM_001845	1282	Hs.17441	NM_001845	ENSG00000187498	COL4A1	BSVD|RATOR	collagen type IV alpha 1 chain	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr13-1169	chr13	110884820	110885820	+	14.7	1000	"intron (NM_001303110, intron 2 of 24)"	"intron (NM_001303110, intron 2 of 24)"	74184	NM_001845	1282	Hs.17441	NM_001845	ENSG00000187498	COL4A1	BSVD|RATOR	collagen type IV alpha 1 chain	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr13-1171	chr13	110921983	110922983	+	15.4	1000	"intron (NM_001303110, intron 1 of 24)"	"intron (NM_001303110, intron 1 of 24)"	37021	NM_001845	1282	Hs.17441	NM_001845	ENSG00000187498	COL4A1	BSVD|RATOR	collagen type IV alpha 1 chain	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr13-1174	chr13	110975712	110976712	+	13.4	1000	"intron (NM_001846, intron 3 of 47)"	"intron (NM_001846, intron 3 of 47)"	16598	NM_001846	1284	Hs.508716	NM_001846	ENSG00000134871	COL4A2	ICH|POREN2	collagen type IV alpha 2 chain	protein-coding	13.44	0.49	27.42857143	1.16E-11
chr13-1180	chr13	111062259	111063259	+	14.1	1000	"intron (NM_001846, intron 4 of 47)"	"intron (NM_001846, intron 4 of 47)"	52875	NM_001267044	100129836	Hs.640035	NM_001267044		COL4A2-AS2	-	COL4A2 antisense RNA 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr13-1182	chr13	111082846	111086273	+	46.1	3427	"intron (NM_001846, intron 10 of 47)"	"intron (NM_001846, intron 10 of 47)"	31075	NM_001267044	100129836	Hs.640035	NM_001267044		COL4A2-AS2	-	COL4A2 antisense RNA 2	protein-coding	46.09	10.68	4.315543071	1.21E-12
chr13-1184	chr13	111090642	111091642	+	14.1	1000	"intron (NM_001846, intron 15 of 47)"	L1MC1|LINE|L1	24492	NM_001267044	100129836	Hs.640035	NM_001267044		COL4A2-AS2	-	COL4A2 antisense RNA 2	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr13-1191	chr13	112791556	112792556	+	14.7	1000	Intergenic	AluSx|SINE|Alu	22968	NR_134944	100506016	Hs.371110	NR_134944		LOC100506016	-	uncharacterized LOC100506016	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr13-1194	chr13	112884878	112885878	+	14.1	1000	Intergenic	Intergenic	33731	NR_108094	101928698	Hs.528451	NR_108094		LINC01070	-	long intergenic non-protein coding RNA 1070	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr13-1197	chr13	112988968	112989968	+	15.4	1000	Intergenic	Charlie1b|DNA|hAT-Charlie	-3929	NR_126345	104266956		NR_126345	ENSG00000223626	LINC01044	-	long intergenic non-protein coding RNA 1044	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr13-1198	chr13	113003966	113004966	+	15.4	1000	Intergenic	Intergenic	-18927	NR_126345	104266956		NR_126345	ENSG00000223626	LINC01044	-	long intergenic non-protein coding RNA 1044	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr13-1199	chr13	113039980	113040980	+	14.7	1000	"intron (NM_145248, intron 1 of 6)"	HUERS-P1-int|LTR|ERV1	9829	NM_145248	122258	Hs.97592	NM_145248	ENSG00000153498	SPACA7	C13orf28	sperm acrosome associated 7	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr13-1200	chr13	113053983	113054983	+	14.7	1000	"intron (NM_145248, intron 4 of 6)"	"intron (NM_145248, intron 4 of 6)"	23832	NM_145248	122258	Hs.97592	NM_145248	ENSG00000153498	SPACA7	C13orf28	sperm acrosome associated 7	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr13-1201	chr13	113102506	113103506	+	15.4	1000	Intergenic	Intergenic	72355	NM_145248	122258	Hs.97592	NM_145248	ENSG00000153498	SPACA7	C13orf28	sperm acrosome associated 7	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr13-1207	chr13	113324028	113325028	+	15.4	1000	"intron (NM_207440, intron 1 of 2)"	"intron (NM_207440, intron 1 of 2)"	-20115	NM_032189	23250	Hs.29189	NM_015205	ENSG00000068650	ATP11A	ATPIH|ATPIS	ATPase phospholipid transporting 11A	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr13-1213	chr13	113447074	113448336	+	19.2	1262	"intron (NM_032189, intron 2 of 28)"	AluSx1|SINE|Alu	-38660	NR_046661	100874205	Hs.658692	NR_046661	ENSG00000232684	ATP11A-AS1	-	ATP11A antisense RNA 1	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr13-1217	chr13	113633487	113634487	+	15.4	1000	"exon (NM_001320816, exon 1 of 30)"	"exon (NM_001320816, exon 1 of 30)"	361	NM_001320816	23263	Hs.170422	NM_024979	ENSG00000126217	MCF2L	ARHGEF14|DBS|OST	MCF.2 cell line derived transforming sequence like	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr13-1219	chr13	113789357	113790357	+	15.4	1000	"intron (NM_001312675, intron 2 of 7)"	MLT1A1|LTR|ERVL-MaLR	-5497	NR_126424	104413892		NR_126424		F10-AS1	-	F10 antisense RNA 1	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr13-1222	chr13	114432331	114433847	+	24.3	1516	"intron (NM_002929, intron 4 of 6)"	CpG	20973	NR_028064	100130386	Hs.704121	NM_001137672	ENSG00000279770	LINC00552	-	long intergenic non-protein coding RNA 552	ncRNA	24.32	3.4	7.152941176	7.55E-11
chr13-1224	chr13	114460945	114464366	+	51.8	3421	"intron (NM_182614, intron 1 of 8)"	"intron (NM_182614, intron 1 of 8)"	439	NM_182614	348013	Hs.280805	NM_182614	ENSG00000184497	TMEM255B	FAM70B	transmembrane protein 255B	protein-coding	51.85	7.77	6.673101673	6.93E-20
chr13-1228	chr13	114564267	114568031	+	63.4	3764	"intron (NM_000820, intron 2 of 14)"	CpG	927	NM_000820	2621	Hs.646346	NM_000820	ENSG00000183087	GAS6	AXLLG|AXSF	growth arrest specific 6	protein-coding	63.37	12.13	5.224237428	1.13E-19
chr13-1235	chr13	114618415	114619913	+	23.7	1498	"intron (NM_001278674, intron 4 of 7)"	"intron (NM_001278674, intron 4 of 7)"	12800	NR_047495	100861555	Hs.353773	NR_047495	ENSG00000260910	LINC00565	-	long intergenic non-protein coding RNA 565	ncRNA	23.68	5.82	4.068728522	1.51E-06
chr13-1236	chr13	114622108	114623108	+	14.7	1000	"exon (NM_001278674, exon 6 of 8)"	"exon (NM_001278674, exon 6 of 8)"	9356	NR_047495	100861555	Hs.353773	NR_047495	ENSG00000260910	LINC00565	-	long intergenic non-protein coding RNA 565	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr13-125	chr13	29292113	29293622	+	25.6	1509	"5' UTR (NM_001135919, exon 1 of 7)"	"5' UTR (NM_001135919, exon 1 of 7)"	283	NM_001347960	283537	Hs.117167	NM_181785	ENSG00000139508	SLC46A3	FKSG16	solute carrier family 46 member 3	protein-coding	25.6	0.97	26.39175258	7.61E-22
chr13-127	chr13	31402465	31403978	+	23.7	1513	Intergenic	Intergenic	25878	NR_047012	100874158	Hs.577982	NR_047012	ENSG00000237879	LINC00398	-	long intergenic non-protein coding RNA 398	ncRNA	23.68	5.82	4.068728522	1.51E-06
chr13-131	chr13	41219508	41221081	+	25.6	1573	"intron (NM_002015, intron 1 of 2)"	"intron (NM_002015, intron 1 of 2)"	20440	NM_002015	2308	Hs.370666	NM_002015	ENSG00000150907	FOXO1	FKH1|FKHR|FOXO1A	forkhead box O1	protein-coding	25.6	4.85	5.278350515	4.26E-09
chr13-133	chr13	44452503	44454245	+	30.7	1742	promoter-TSS (NM_153218)	promoter-TSS (NM_153218)	-46	NM_001128303	144811	Hs.210586	NM_153218	ENSG00000179630	LACC1	C13orf31|FAMIN	laccase domain containing 1	protein-coding	30.72	0.97	31.67010309	9.87E-28
chr13-146	chr13	111101232	111102820	+	25.6	1588	"exon (NM_001846, exon 19 of 48)"	"exon (NM_001846, exon 19 of 48)"	13608	NM_001267044	100129836	Hs.640035	NM_001267044		COL4A2-AS2	-	COL4A2 antisense RNA 2	protein-coding	25.6	5.34	4.794007491	2.00E-08
chr13-149	chr13	112786958	112788524	+	26.2	1566	Intergenic	Intergenic	26308	NR_120394	100505996	Hs.654853	NR_120392	ENSG00000224243	LINC00403	-	long intergenic non-protein coding RNA 403	ncRNA	26.24	2.91	9.017182131	6.53E-13
chr13-152	chr13	113277266	113279443	+	39	2177	Intergenic	Intergenic	-23004	NM_207440	400165	Hs.591213	NM_207440		ATP11AUN	C13orf35|SMABLO1	ATP11A upstream neighbor	protein-coding	39.04	5.34	7.310861423	2.72E-16
chr13-154	chr13	113681634	113682634	+	19.8	1000	"intron (NM_024979, intron 3 of 29)"	"intron (NM_024979, intron 3 of 29)"	26106	NM_001320817	23263	Hs.170422	NM_024979	ENSG00000126217	MCF2L	ARHGEF14|DBS|OST	MCF.2 cell line derived transforming sequence like	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr13-155	chr13	114312290	114313290	+	19.8	1000	promoter-TSS (NM_000705)	promoter-TSS (NM_000705)	-277	NM_000705	496	Hs.434202	NM_000705	ENSG00000186009	ATP4B	ATP6B	ATPase H+/K+ transporting beta subunit	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr13-160	chr13	25724039	25725296	+	22.4	1257	Intergenic	Intergenic	21638	NM_199138	219287	Hs.528335	NM_152704	ENSG00000165566	AMER2	FAM123A	APC membrane recruitment protein 2	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr13-163	chr13	26710903	26712371	+	24.3	1468	"intron (NM_183045, intron 5 of 5)"	L1M4c|LINE|L1	84257	NM_183044	6049	Hs.136885	NM_005977	ENSG00000127870	RNF6	-	ring finger protein 6	protein-coding	24.32	0.97	25.07216495	2.01E-20
chr13-165	chr13	27926330	27927680	+	23	1350	Intergenic	Intergenic	-71676	NM_002097	2971	Hs.445977	NM_002097	ENSG00000122034	GTF3A	AP2|TFIIIA	general transcription factor IIIA	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr13-167	chr13	28548010	28549492	+	25.6	1482	Intergenic	Intergenic	-5246	NM_001265	1045	Hs.127383	NM_001265	ENSG00000165556	CDX2	CDX-3|CDX2/AS|CDX3	caudal type homeobox 2	protein-coding	25.6	4.85	5.278350515	4.26E-09
chr13-178	chr13	40807059	40808777	+	30.7	1718	Intergenic	Intergenic	-13279	NR_033877	400123	Hs.577960	NR_033877	ENSG00000215483	LINC00548	-	long intergenic non-protein coding RNA 548	ncRNA	30.72	1.46	21.04109589	1.19E-23
chr13-182	chr13	51895736	51897244	+	25	1508	Intergenic	Intergenic	-18678	NM_001101320	647174	Hs.685891	NM_001101320	ENSG00000253309	SERPINE3	-	serpin family E member 3	protein-coding	24.96	4.37	5.711670481	4.38E-09
chr13-192	chr13	97897570	97898570	+	19.8	1000	"intron (NM_001306070, intron 1 of 7)"	"intron (NM_001306070, intron 1 of 7)"	23520	NM_144778	10150	Hs.657347	NM_144778	ENSG00000139793	MBNL2	MBLL|MBLL39|PRO2032	muscleblind like splicing regulator 2	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr13-195	chr13	110841063	110842063	+	18.6	1000	"intron (NM_001845, intron 24 of 51)"	AluSp|SINE|Alu	117941	NM_001845	1282	Hs.17441	NM_001845	ENSG00000187498	COL4A1	BSVD|RATOR	collagen type IV alpha 1 chain	protein-coding	18.56	1.46	12.71232877	2.41E-11
chr13-196	chr13	111115294	111116574	+	22.4	1280	promoter-TSS (NM_001267044)	promoter-TSS (NM_001267044)	-300	NM_001267044	100129836	Hs.640035	NM_001267044		COL4A2-AS2	-	COL4A2 antisense RNA 2	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr13-203	chr13	113606676	113607929	+	21.8	1253	Intergenic	Intergenic	15650	NR_034002	100289410	Hs.667436	NR_034002		MCF2L-AS1	-	MCF2L antisense RNA 1	ncRNA	21.76	3.88	5.608247423	2.53E-08
chr13-208	chr13	24591121	24592660	+	23.7	1539	"intron (NM_001286792, intron 3 of 14)"	"intron (NM_001286792, intron 3 of 14)"	38125	NR_104595	221178	Hs.434298	NM_153023	ENSG00000182957	SPATA13	ARHGEF29|ASEF2	spermatogenesis associated 13	protein-coding	23.68	5.82	4.068728522	1.51E-06
chr13-209	chr13	25250545	25251837	+	21.8	1292	Intergenic	Intergenic	-3358	NM_001676	479	Hs.147111	NM_001676	ENSG00000075673	ATP12A	#945|ATP1AL1|HK	ATPase H+/K+ transporting non-gastric alpha2 subunit	protein-coding	21.76	5.34	4.074906367	1.97E-06
chr13-213	chr13	27940046	27941451	+	23	1405	Intergenic	Intergenic	-57933	NM_002097	2971	Hs.445977	NM_002097	ENSG00000122034	GTF3A	AP2|TFIIIA	general transcription factor IIIA	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr13-214	chr13	28373281	28374281	+	19.2	1000	Intergenic	Intergenic	7001	NM_145657	219409	Hs.351785	NM_145657	ENSG00000169840	GSX1	GSH1|Gsh-1	GS homeobox 1	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr13-217	chr13	29136439	29137732	+	21.1	1293	Intergenic	Intergenic	-67820	NM_001160030	2321	Hs.594454	NM_002019	ENSG00000102755	FLT1	FLT|FLT-1|VEGFR-1|VEGFR1	fms related tyrosine kinase 1	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr13-218	chr13	30257888	30258888	+	19.2	1000	Intergenic	Intergenic	36558	NR_135320	102723345	Hs.121353	NR_135320		LOC102723345	-	uncharacterized LOC102723345	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr13-219	chr13	30600136	30601136	+	18.6	1000	Intergenic	LTR33|LTR|ERVL	82376	NR_046998	100874146	Hs.574116	NR_046998	ENSG00000224511	LINC00365	-	long intergenic non-protein coding RNA 365	ncRNA	18.56	1.46	12.71232877	2.41E-11
chr13-22	chr13	24552694	24554210	+	32	1516	promoter-TSS (NR_104595)	promoter-TSS (NR_104595)	-313	NM_001286792	221178	Hs.434298	NM_153023	ENSG00000182957	SPATA13	ARHGEF29|ASEF2	spermatogenesis associated 13	protein-coding	32	6.8	4.705882353	5.32E-10
chr13-220	chr13	31383308	31384308	+	17.9	1000	"intron (NR_047012, intron 1 of 1)"	L2a|LINE|L2	6465	NR_047012	100874158	Hs.577982	NR_047012	ENSG00000237879	LINC00398	-	long intergenic non-protein coding RNA 398	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr13-221	chr13	31451987	31454765	+	40.3	2778	Intergenic	Intergenic	-3323	NR_103813	440132	Hs.729493	NR_103813	ENSG00000236094	LINC00545	-	long intergenic non-protein coding RNA 545	ncRNA	40.33	7.77	5.19047619	6.49E-13
chr13-227	chr13	41172679	41173679	+	18.6	1000	"intron (NM_002015, intron 1 of 2)"	"intron (NM_002015, intron 1 of 2)"	67555	NM_002015	2308	Hs.370666	NM_002015	ENSG00000150907	FOXO1	FKH1|FKHR|FOXO1A	forkhead box O1	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr13-229	chr13	42609470	42610470	+	18.6	1000	Intergenic	L1MEe|LINE|L1	-4202	NM_001204504	160851	Hs.630380	NM_152910	ENSG00000102780	DGKH	DGKeta	diacylglycerol kinase eta	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr13-231	chr13	46507422	46508422	+	17.9	1000	Intergenic	Intergenic	-82076	NM_198849	283514	Hs.368483	NM_198849	ENSG00000215475	SIAH3	-	siah E3 ubiquitin protein ligase family member 3	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr13-233	chr13	51821753	51822753	+	17.9	1000	"intron (NM_145019, intron 3 of 4)"	"intron (NM_145019, intron 3 of 4)"	25783	NM_145019	220108	Hs.71913	NM_145019	ENSG00000150510	FAM124A	-	family with sequence similarity 124 member A	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr13-234	chr13	52389525	52391001	+	25	1476	"non-coding (NR_027047, exon 5 of 5)"	"non-coding (NR_027047, exon 5 of 5)"	-11965	NM_001270424	79758	Hs.266728	NM_024705	ENSG00000102796	DHRS12	SDR40C1	dehydrogenase/reductase 12	protein-coding	24.96	4.37	5.711670481	4.38E-09
chr13-237	chr13	52569235	52571132	+	31.4	1897	"intron (NM_001330578, intron 1 of 19)"	"intron (NM_001330578, intron 1 of 19)"	15447	NM_001330578	540	Hs.492280	NM_000053	ENSG00000123191	ATP7B	PWD|WC1|WD|WND	ATPase copper transporting beta	protein-coding	31.36	3.88	8.082474227	3.25E-14
chr13-239	chr13	52687867	52688867	+	18.6	1000	"intron (NM_199289, intron 4 of 21)"	"intron (NM_199289, intron 4 of 21)"	-14664	NR_110306	101929657	Hs.637461	NR_110306	ENSG00000273523	LOC101929657	-	uncharacterized LOC101929657	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr13-240	chr13	59473670	59474670	+	19.2	1000	Intergenic	Intergenic	-666919	NR_132367	106144531	Hs.736640	NR_132367	ENSG00000232954	LINC00374	-	long intergenic non-protein coding RNA 374	ncRNA	19.2	3.4	5.647058824	1.47E-07
chr13-25	chr13	46974027	46975283	+	27.5	1256	Intergenic	Intergenic	-10478	NM_001286761	80183	Hs.98117	NM_025113	ENSG00000102445	RUBCNL	C13orf18|KIAA0226L	RUN and cysteine rich domain containing beclin 1 interacting protein like	protein-coding	27.52	2.91	9.457044674	7.03E-14
chr13-250	chr13	110944055	110945055	+	18.6	1000	"intron (NM_001303110, intron 1 of 24)"	"intron (NM_001303110, intron 1 of 24)"	14949	NM_001845	1282	Hs.17441	NM_001845	ENSG00000187498	COL4A1	BSVD|RATOR	collagen type IV alpha 1 chain	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr13-264	chr13	20934122	20936180	+	33.9	2058	Intergenic	MIRb|SINE|MIR	72834	NR_039721	100616304		NR_039721	ENSG00000263978	MIR4499	-	microRNA 4499	ncRNA	33.92	4.37	7.76201373	6.77E-15
chr13-268	chr13	24264652	24265652	+	17.3	1000	Intergenic	Intergenic	111653	NM_001204458	55504	Hs.149168	NM_018647	ENSG00000127863	TNFRSF19	TAJ|TAJ-alpha|TRADE|TROY	TNF receptor superfamily member 19	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr13-271	chr13	24641046	24642046	+	18.6	1000	"intron (NM_001286792, intron 3 of 14)"	"intron (NM_001286792, intron 3 of 14)"	87781	NR_104595	221178	Hs.434298	NM_153023	ENSG00000182957	SPATA13	ARHGEF29|ASEF2	spermatogenesis associated 13	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr13-273	chr13	25970757	25972367	+	28.2	1610	"intron (NM_016529, intron 1 of 36)"	"intron (NM_016529, intron 1 of 36)"	25413	NM_016529	51761	Hs.444957	NM_016529	ENSG00000132932	ATP8A2	ATP|ATPIB|CAMRQ4|IB|ML-1	ATPase phospholipid transporting 8A2	protein-coding	28.16	1.94	14.51546392	1.99E-18
chr13-277	chr13	25995768	25998997	+	48.6	3229	"intron (NM_016529, intron 1 of 36)"	L1MC4a|LINE|L1	-45530	NM_001313741	51761	Hs.444957	NM_016529	ENSG00000132932	ATP8A2	ATP|ATPIB|CAMRQ4|IB|ML-1	ATPase phospholipid transporting 8A2	protein-coding	48.65	7.77	6.261261261	2.96E-18
chr13-289	chr13	39680645	39682059	+	22.4	1414	Intergenic	Intergenic	68904	NR_073109	387921	Hs.507783	NM_001012754	ENSG00000188811	NHLRC3	-	NHL repeat containing 3	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr13-290	chr13	40174815	40177444	+	51.8	2629	"intron (NM_005780, intron 1 of 3)"	"intron (NM_005780, intron 1 of 3)"	1227	NM_005780	10186	Hs.507798	NM_005780	ENSG00000183722	LHFP	-	lipoma HMGIC fusion partner	protein-coding	51.85	9.22	5.623644252	2.22E-17
chr13-293	chr13	45425551	45426551	+	18.6	1000	Intergenic	AluJb|SINE|Alu	-42285	NR_038433	144817	Hs.585616	NR_038433	ENSG00000235097	LINC00330	NCRNA00330	long intergenic non-protein coding RNA 330	ncRNA	18.56	4.37	4.247139588	1.41E-05
chr13-295	chr13	51866857	51867857	+	17.3	1000	Intergenic	Intergenic	-47811	NM_001101320	647174	Hs.685891	NM_001101320	ENSG00000253309	SERPINE3	-	serpin family E member 3	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr13-298	chr13	52702269	52704173	+	37.1	1904	promoter-TSS (NM_199289)	promoter-TSS (NM_199289)	7	NM_199289	341676	Hs.672144	NM_199289	ENSG00000197168	NEK5	-	NIMA related kinase 5	protein-coding	37.12	6.8	5.458823529	7.17E-13
chr13-302	chr13	98793745	98796767	+	47.4	3022	promoter-TSS (NM_001001715)	promoter-TSS (NM_001001715)	-96	NM_005766	10160	Hs.403917	NM_005766	ENSG00000152767	FARP1	CDEP|FARP1-IT1|PLEKHC2|PPP1R75	"FERM, ARH/RhoGEF and pleckstrin domain protein 1"	protein-coding	47.37	3.88	12.20876289	2.57E-27
chr13-304	chr13	101475166	101476432	+	19.8	1266	"intron (NR_047687, intron 2 of 7)"	"intron (NR_047687, intron 2 of 7)"	115220	NR_047687	100885778	Hs.602949	NR_047687	ENSG00000233009	NALCN-AS1	-	NALCN antisense RNA 1	ncRNA	19.84	4.85	4.090721649	1.08E-05
chr13-308	chr13	110870017	110871668	+	28.8	1651	"intron (NM_001303110, intron 2 of 24)"	"intron (NM_001303110, intron 2 of 24)"	88662	NM_001845	1282	Hs.17441	NM_001845	ENSG00000187498	COL4A1	BSVD|RATOR	collagen type IV alpha 1 chain	protein-coding	28.8	3.88	7.422680412	1.97E-12
chr13-309	chr13	110963810	110964810	+	18.6	1000	"intron (NM_001846, intron 3 of 47)"	"intron (NM_001846, intron 3 of 47)"	4696	NM_001846	1284	Hs.508716	NM_001846	ENSG00000134871	COL4A2	ICH|POREN2	collagen type IV alpha 2 chain	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr13-317	chr13	111764724	111774372	+	154.3	9648	"intron (NM_001113512, intron 1 of 17)"	"intron (NM_001113512, intron 1 of 17)"	-1523	NR_046667	100874238	Hs.569218	NR_046667	ENSG00000235875	ARHGEF7-AS2	-	ARHGEF7 antisense RNA 2	ncRNA	154.26	18.44	8.365509761	1.01E-66
chr13-32	chr13	59498143	59499665	+	33.3	1522	Intergenic	MER20|DNA|hAT-Charlie	-691653	NR_132367	106144531	Hs.736640	NR_132367	ENSG00000232954	LINC00374	-	long intergenic non-protein coding RNA 374	ncRNA	33.28	5.82	5.718213058	4.04E-12
chr13-320	chr13	113294283	113295283	+	17.9	1000	Intergenic	Intergenic	-6575	NM_207440	400165	Hs.591213	NM_207440		ATP11AUN	C13orf35|SMABLO1	ATP11A upstream neighbor	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr13-322	chr13	113359480	113360731	+	21.8	1251	"intron (NM_032189, intron 1 of 28)"	"intron (NM_032189, intron 1 of 28)"	15462	NM_015205	23250	Hs.29189	NM_015205	ENSG00000068650	ATP11A	ATPIH|ATPIS	ATPase phospholipid transporting 11A	protein-coding	21.76	3.4	6.4	3.73E-09
chr13-325	chr13	113543180	113544180	+	17.9	1000	Intergenic	Intergenic	79272	NR_034002	100289410	Hs.667436	NR_034002		MCF2L-AS1	-	MCF2L antisense RNA 1	ncRNA	17.92	1.46	12.2739726	2.41E-11
chr13-326	chr13	113582827	113583827	+	17.9	1000	Intergenic	Intergenic	39625	NR_034002	100289410	Hs.667436	NR_034002		MCF2L-AS1	-	MCF2L antisense RNA 1	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr13-331	chr13	20715281	20716281	+	17.3	1000	"3' UTR (NM_021954, exon 2 of 2)"	"3' UTR (NM_021954, exon 2 of 2)"	19402	NM_021954	2700	Hs.130313	NM_021954	ENSG00000121743	GJA3	CTRCT14|CX46|CZP3	gap junction protein alpha 3	protein-coding	17.28	0	17.80043126	3.68E-16
chr13-333	chr13	20748435	20751598	+	52.5	3163	Intergenic	MIRb|SINE|MIR	-14833	NM_021954	2700	Hs.130313	NM_021954	ENSG00000121743	GJA3	CTRCT14|CX46|CZP3	gap junction protein alpha 3	protein-coding	52.49	6.8	7.719117647	8.94E-23
chr13-339	chr13	21002054	21003054	+	17.3	1000	"intron (NM_015974, intron 5 of 7)"	L1MD|LINE|L1	5431	NR_039721	100616304		NR_039721	ENSG00000263978	MIR4499	-	microRNA 4499	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr13-340	chr13	21612185	21613185	+	17.9	1000	"intron (NM_014572, intron 2 of 7)"	U4|snRNA|snRNA	23037	NM_014572	26524	Hs.78960	NM_014572	ENSG00000150457	LATS2	KPM	large tumor suppressor kinase 2	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr13-342	chr13	24272972	24276468	+	48	3496	Intergenic	Intergenic	121221	NM_001204458	55504	Hs.149168	NM_018647	ENSG00000127863	TNFRSF19	TAJ|TAJ-alpha|TRADE|TROY	TNF receptor superfamily member 19	protein-coding	48.01	6.8	7.060294118	2.78E-19
chr13-343	chr13	24564395	24568014	+	55	3619	"intron (NM_001286792, intron 2 of 14)"	MIRb|SINE|MIR	12439	NR_104595	221178	Hs.434298	NM_153023	ENSG00000182957	SPATA13	ARHGEF29|ASEF2	spermatogenesis associated 13	protein-coding	55.05	11.16	4.932795699	9.34E-17
chr13-350	chr13	25967803	25968803	+	17.9	1000	"intron (NM_016529, intron 1 of 36)"	"intron (NM_016529, intron 1 of 36)"	22154	NM_016529	51761	Hs.444957	NM_016529	ENSG00000132932	ATP8A2	ATP|ATPIB|CAMRQ4|IB|ML-1	ATPase phospholipid transporting 8A2	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr13-357	chr13	27222895	27223895	+	17.9	1000	"intron (NM_001291965, intron 3 of 9)"	L1MCc|LINE|L1	91555	NM_001291965	10810	Hs.618732	NM_006646	ENSG00000132970	WASF3	Brush-1|SCAR3|WAVE3	WAS protein family member 3	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr13-362	chr13	28368734	28369734	+	16.6	1000	Intergenic	Intergenic	2454	NM_145657	219409	Hs.351785	NM_145657	ENSG00000169840	GSX1	GSH1|Gsh-1	GS homeobox 1	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr13-364	chr13	28490443	28492172	+	25.6	1729	"intron (NR_047484, intron 1 of 3)"	"intron (NR_047484, intron 1 of 3)"	-2861	NM_000209	3651	Hs.32938	NM_000209	ENSG00000139515	PDX1	GSF|IDX-1|IPF1|IUF1|MODY4|PAGEN1|PDX-1|STF-1	pancreatic and duodenal homeobox 1	protein-coding	25.6	2.91	8.797250859	6.53E-13
chr13-370	chr13	29556363	29559139	+	39.7	2776	Intergenic	MER33|DNA|hAT-Charlie	-40997	NM_001033602	23281	Hs.22287	NM_015233	ENSG00000132938	MTUS2	CAZIP|ICIS|KIAA0774|TIP150	microtubule associated tumor suppressor candidate 2	protein-coding	39.69	8.74	4.541189931	1.21E-11
chr13-372	chr13	29942050	29943050	+	17.9	1000	"intron (NM_001033602, intron 6 of 13)"	L1MA4A|LINE|L1	-60227	NM_015233	23281	Hs.22287	NM_015233	ENSG00000132938	MTUS2	CAZIP|ICIS|KIAA0774|TIP150	microtubule associated tumor suppressor candidate 2	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr13-376	chr13	31554461	31555461	+	16.6	1000	Intergenic	Intergenic	48127	NM_152325	122046	Hs.124463	NM_152325	ENSG00000175664	TEX26	C13orf26	testis expressed 26	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr13-379	chr13	31973461	31974461	+	17.3	1000	Intergenic	L1M1|LINE|L1	199849	NM_194318	145173	Hs.13205	NM_194318	ENSG00000187676	B3GLCT	B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T	beta 3-glucosyltransferase	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr13-387	chr13	41160478	41161478	+	17.9	1000	"intron (NM_002015, intron 1 of 2)"	"intron (NM_002015, intron 1 of 2)"	79756	NM_002015	2308	Hs.370666	NM_002015	ENSG00000150907	FOXO1	FKH1|FKHR|FOXO1A	forkhead box O1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr13-389	chr13	45242904	45243904	+	16.6	1000	Intergenic	Intergenic	-92703	NM_183422	8848	Hs.436383	NM_006022	ENSG00000102804	TSC22D1	Ptg-2|TGFB1I4|TSC22	TSC22 domain family member 1	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr13-395	chr13	49339249	49340249	+	16.6	1000	Intergenic	L1M4c|LINE|L1	111902	NM_001308470	57105	Hs.253706	NM_020377	ENSG00000152207	CYSLTR2	CYSLT2|CYSLT2R|GPCR21|HG57|HPN321|KPG_011|PSEC0146|hGPCR21	cysteinyl leukotriene receptor 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr13-408	chr13	98787768	98789024	+	19.8	1256	Intergenic	Intergenic	-6420	NM_001286839	10160	Hs.403917	NM_005766	ENSG00000152767	FARP1	CDEP|FARP1-IT1|PLEKHC2|PPP1R75	"FERM, ARH/RhoGEF and pleckstrin domain protein 1"	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr13-411	chr13	98846483	98847483	+	17.9	1000	"intron (NM_005766, intron 1 of 26)"	"intron (NM_005766, intron 1 of 26)"	-13795	NR_036129	100422881		NR_036129	ENSG00000263399	MIR3170	mir-3170	microRNA 3170	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr13-416	chr13	106822166	106823602	+	26.2	1436	Intergenic	Intergenic	-206027	NR_034119	728192	Hs.559194	NR_034119		LINC00460	-	long intergenic non-protein coding RNA 460	ncRNA	26.24	2.91	9.017182131	6.53E-13
chr13-418	chr13	107105958	107106958	+	16.6	1000	Intergenic	Intergenic	77547	NR_034119	728192	Hs.559194	NR_034119		LINC00460	-	long intergenic non-protein coding RNA 460	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr13-419	chr13	110420267	110421267	+	17.9	1000	"intron (NM_003749, intron 1 of 1)"	"intron (NM_003749, intron 1 of 1)"	18147	NM_003749	8660	Hs.442344	NM_003749	ENSG00000185950	IRS2	IRS-2	insulin receptor substrate 2	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr13-42	chr13	111027547	111028833	+	24.3	1286	"intron (NM_001846, intron 4 of 47)"	"intron (NM_001846, intron 4 of 47)"	34885	NR_107040	102465872		NR_107040	ENSG00000276765	MIR8073	hsa-mir-8073	microRNA 8073	ncRNA	24.32	4.85	5.01443299	2.27E-08
chr13-421	chr13	110858191	110859454	+	18.6	1263	"intron (NM_001303110, intron 15 of 24)"	"intron (NM_001303110, intron 15 of 24)"	100682	NM_001845	1282	Hs.17441	NM_001845	ENSG00000187498	COL4A1	BSVD|RATOR	collagen type IV alpha 1 chain	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr13-422	chr13	110862122	110863122	+	17.3	1000	"intron (NM_001303110, intron 8 of 24)"	"intron (NM_001303110, intron 8 of 24)"	96882	NM_001845	1282	Hs.17441	NM_001845	ENSG00000187498	COL4A1	BSVD|RATOR	collagen type IV alpha 1 chain	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr13-423	chr13	110865560	110866560	+	17.3	1000	"intron (NM_001303110, intron 4 of 24)"	"intron (NM_001303110, intron 4 of 24)"	93444	NM_001845	1282	Hs.17441	NM_001845	ENSG00000187498	COL4A1	BSVD|RATOR	collagen type IV alpha 1 chain	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr13-424	chr13	110915285	110916285	+	16.6	1000	"intron (NM_001303110, intron 1 of 24)"	"intron (NM_001303110, intron 1 of 24)"	43719	NM_001845	1282	Hs.17441	NM_001845	ENSG00000187498	COL4A1	BSVD|RATOR	collagen type IV alpha 1 chain	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr13-425	chr13	110949421	110955171	+	79.4	5750	"intron (NM_001303110, intron 1 of 24)"	"intron (NM_001303110, intron 1 of 24)"	7208	NM_001845	1282	Hs.17441	NM_001845	ENSG00000187498	COL4A1	BSVD|RATOR	collagen type IV alpha 1 chain	protein-coding	79.37	18.44	4.304229935	1.55E-20
chr13-428	chr13	111066032	111067700	+	27.5	1668	"intron (NM_001846, intron 4 of 47)"	"intron (NM_001846, intron 4 of 47)"	48768	NM_001267044	100129836	Hs.640035	NM_001267044		COL4A2-AS2	-	COL4A2 antisense RNA 2	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr13-432	chr13	111418367	111419367	+	17.9	1000	Intergenic	Intergenic	46564	NR_135280	283486	Hs.447504	NR_135280	ENSG00000259831	LINC00567	-	long intergenic non-protein coding RNA 567	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr13-433	chr13	111716492	111717492	+	17.3	1000	Intergenic	MER4B|LTR|ERV1	-31193	NR_120415	101927802	Hs.559193	NR_120415		LINC00368	-	long intergenic non-protein coding RNA 368	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr13-434	chr13	112688033	112689033	+	15.4	1000	"intron (NR_120392, intron 1 of 3)"	"intron (NR_120392, intron 1 of 3)"	-33380	NM_005986	6656	Hs.202526	NM_005986	ENSG00000182968	SOX1	-	SRY-box 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr13-436	chr13	112858859	112863036	+	56.3	4177	Intergenic	Intergenic	9300	NR_108094	101928698	Hs.528451	NR_108094		LINC01070	-	long intergenic non-protein coding RNA 1070	ncRNA	56.33	9.71	5.801235839	1.19E-19
chr13-438	chr13	113342558	113349377	+	100.5	6819	"intron (NM_032189, intron 1 of 28)"	"intron (NM_032189, intron 1 of 28)"	1324	NM_015205	23250	Hs.29189	NM_015205	ENSG00000068650	ATP11A	ATPIH|ATPIS	ATPase phospholipid transporting 11A	protein-coding	100.49	16.99	5.91465568	7.04E-34
chr13-441	chr13	113389406	113390406	+	17.9	1000	"intron (NM_032189, intron 1 of 28)"	"intron (NM_032189, intron 1 of 28)"	19139	NR_109811	100874205	Hs.658692	NR_046661	ENSG00000232684	ATP11A-AS1	-	ATP11A antisense RNA 1	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr13-442	chr13	113429698	113430698	+	17.9	1000	"intron (NM_032189, intron 1 of 28)"	MER89|LTR|ERV1	-21153	NR_046661	100874205	Hs.658692	NR_046661	ENSG00000232684	ATP11A-AS1	-	ATP11A antisense RNA 1	ncRNA	17.92	0.97	18.4742268	1.12E-13
chr13-449	chr13	114599623	114600930	+	21.1	1307	"intron (NM_001278674, intron 1 of 7)"	"intron (NM_001278674, intron 1 of 7)"	2200	NM_001278674	643365	Hs.127655	NM_001039767		LINC00452	LINC00453	long intergenic non-protein coding RNA 452	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr13-45	chr13	114468411	114469719	+	26.9	1308	"intron (NM_182614, intron 1 of 8)"	"intron (NM_182614, intron 1 of 8)"	6849	NM_182614	348013	Hs.280805	NM_182614	ENSG00000184497	TMEM255B	FAM70B	transmembrane protein 255B	protein-coding	26.88	5.82	4.618556701	1.71E-08
chr13-450	chr13	20733971	20736603	+	41	2632	promoter-TSS (NM_021954)	promoter-TSS (NM_021954)	-104	NM_021954	2700	Hs.130313	NM_021954	ENSG00000121743	GJA3	CTRCT14|CX46|CZP3	gap junction protein alpha 3	protein-coding	40.97	5.82	7.0395189	5.30E-17
chr13-459	chr13	25254361	25256038	+	29.4	1677	"intron (NM_001676, intron 1 of 22)"	"intron (NM_001676, intron 1 of 22)"	650	NM_001185085	479	Hs.147111	NM_001676	ENSG00000075673	ATP12A	#945|ATP1AL1|HK	ATPase H+/K+ transporting non-gastric alpha2 subunit	protein-coding	29.44	1.94	15.17525773	1.31E-19
chr13-46	chr13	21276679	21277679	+	21.8	1000	promoter-TSS (NM_138284)	promoter-TSS (NM_138284)	-303	NM_138284	53342	Hs.655142	NM_138284	ENSG00000172458	IL17D	IL-17D	interleukin 17D	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr13-461	chr13	25981984	25982984	+	16.6	1000	"intron (NM_016529, intron 1 of 36)"	AluSc|SINE|Alu	36335	NM_016529	51761	Hs.444957	NM_016529	ENSG00000132932	ATP8A2	ATP|ATPIB|CAMRQ4|IB|ML-1	ATPase phospholipid transporting 8A2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr13-463	chr13	27283519	27284785	+	21.1	1266	Intergenic	MER5B|DNA|hAT-Charlie	50770	NM_005288	2835	Hs.123034	NM_005288	ENSG00000132975	GPR12	GPCR12|GPCR21|PPP1R84	G protein-coupled receptor 12	protein-coding	21.12	0	21.75608266	5.97E-21
chr13-467	chr13	28432232	28433510	+	20.5	1278	"intron (NR_047484, intron 1 of 3)"	AluJr|SINE|Alu	-61297	NM_000209	3651	Hs.32938	NM_000209	ENSG00000139515	PDX1	GSF|IDX-1|IPF1|IUF1|MODY4|PAGEN1|PDX-1|STF-1	pancreatic and duodenal homeobox 1	protein-coding	20.48	2.43	8.427983539	2.25E-10
chr13-468	chr13	28470574	28472041	+	25	1467	"intron (NR_047484, intron 1 of 3)"	L1MDa|LINE|L1	-22861	NM_000209	3651	Hs.32938	NM_000209	ENSG00000139515	PDX1	GSF|IDX-1|IPF1|IUF1|MODY4|PAGEN1|PDX-1|STF-1	pancreatic and duodenal homeobox 1	protein-coding	24.96	3.4	7.341176471	7.55E-11
chr13-469	chr13	28526515	28528876	+	34.6	2361	promoter-TSS (NR_135254)	promoter-TSS (NR_135254)	32	NR_135254	100132234	Hs.197435	NR_135254	ENSG00000260704	LINC00543	-	long intergenic non-protein coding RNA 543	ncRNA	34.56	3.88	8.907216495	5.09E-17
chr13-470	chr13	28533546	28543828	+	148.5	10282	"intron (NM_001265, intron 2 of 2)"	AluJo|SINE|Alu	4818	NM_001265	1045	Hs.127383	NM_001265	ENSG00000165556	CDX2	CDX-3|CDX2/AS|CDX3	caudal type homeobox 2	protein-coding	148.5	24.27	6.118665019	3.44E-51
chr13-472	chr13	28671882	28672882	+	17.3	1000	"intron (NR_130706, intron 1 of 24)"	AluSx|SINE|Alu	2347	NM_004119	2322	Hs.507590	NM_004119	ENSG00000122025	FLT3	CD135|FLK-2|FLK2|STK1	fms related tyrosine kinase 3	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr13-474	chr13	29175988	29177989	+	31.4	2001	Intergenic	Intergenic	-56153	NM_015932	51371	Hs.268742	NM_015932	ENSG00000132963	POMP	C13orf12|HSPC014|PNAS-110|UMP1	proteasome maturation protein	protein-coding	31.36	5.82	5.388316151	1.29E-10
chr13-477	chr13	30287735	30288735	+	17.3	1000	Intergenic	Intergenic	66405	NR_135320	102723345	Hs.121353	NR_135320		LOC102723345	-	uncharacterized LOC102723345	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr13-478	chr13	30427695	30428695	+	16	1000	Intergenic	Intergenic	-3375	NM_007106	5412	Hs.145575	NM_007106	ENSG00000122042	UBL3	HCG-1|PNSC1	ubiquitin like 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr13-483	chr13	31475261	31476261	+	16.6	1000	"intron (NR_038287, intron 2 of 3)"	L2c|LINE|L2	-4551	NM_032849	84935	Hs.147880	NM_032849	ENSG00000102802	MEDAG	AWMS3|C13orf33|MEDA-4|MEDA4|hAWMS3	mesenteric estrogen dependent adipogenesis	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr13-486	chr13	31955309	31956309	+	16.6	1000	Intergenic	Intergenic	181697	NM_194318	145173	Hs.13205	NM_194318	ENSG00000187676	B3GLCT	B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T	beta 3-glucosyltransferase	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr13-488	chr13	32687277	32688277	+	15.4	1000	"intron (NM_023037, intron 3 of 60)"	"intron (NM_023037, intron 3 of 60)"	-82001	NR_103839	100507099	Hs.536364	NR_103839		FRY-AS1	-	FRY antisense RNA 1	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr13-491	chr13	38288565	38289565	+	16.6	1000	"intron (NM_001135958, intron 2 of 9)"	L2a|LINE|L2	-116084	NM_001286667	10631	Hs.136348	NM_006475	ENSG00000133110	POSTN	OSF-2|OSF2|PDLPOSTN|PN	periostin	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr13-496	chr13	41053817	41054817	+	16.6	1000	"intron (NR_024505, intron 1 of 6)"	"intron (NR_024505, intron 1 of 6)"	826	NR_024505	646982	Hs.287664	NR_024505	ENSG00000215483	LINC00598	-	long intergenic non-protein coding RNA 598	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr13-504	chr13	41249281	41250281	+	17.3	1000	Intergenic	Intergenic	-9047	NM_002015	2308	Hs.370666	NM_002015	ENSG00000150907	FOXO1	FKH1|FKHR|FOXO1A	forkhead box O1	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr13-505	chr13	43895425	43896425	+	16	1000	"intron (NM_017993, intron 11 of 16)"	"intron (NM_017993, intron 11 of 16)"	-127063	NR_120399	100874130	Hs.738887	NR_120399		ENOX1-AS2	-	ENOX1 antisense RNA 2	ncRNA	16	0.49	32.65306122	1.26E-14
chr13-506	chr13	44885895	44886895	+	16.6	1000	Intergenic	LTR16A1|LTR|ERVL	-61391	NM_001346980	387923	Hs.377972	NM_001010897	ENSG00000151778	SERP2	C13orf21|bA269C23.1	stress associated endoplasmic reticulum protein family member 2	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr13-516	chr13	52417266	52418266	+	16.6	1000	"intron (NR_027048, intron 1 of 2)"	"intron (NR_027048, intron 1 of 2)"	1520	NR_027047	283521	Hs.649896	NM_178515	ENSG00000281106	LINC00282	NCRNA00282	long intergenic non-protein coding RNA 282	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr13-518	chr13	52515683	52516683	+	15.4	1000	"intron (NM_001330578, intron 14 of 19)"	"intron (NM_001330578, intron 14 of 19)"	69447	NM_001330578	540	Hs.492280	NM_000053	ENSG00000123191	ATP7B	PWD|WC1|WD|WND	ATPase copper transporting beta	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr13-524	chr13	59513500	59514500	+	16	1000	Intergenic	Intergenic	-706749	NR_132367	106144531	Hs.736640	NR_132367	ENSG00000232954	LINC00374	-	long intergenic non-protein coding RNA 374	ncRNA	16	3.88	4.12371134	7.91E-05
chr13-525	chr13	73840724	73841724	+	17.3	1000	Intergenic	Intergenic	208294	NM_001730	688	Hs.508234	NM_001730	ENSG00000102554	KLF5	BTEB2|CKLF|IKLF	Kruppel like factor 5	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr13-527	chr13	79180542	79183569	+	41.6	3027	"intron (NR_047001, intron 5 of 5)"	CpG	-4360	NM_006237	5457	Hs.654522	NM_006237	ENSG00000152192	POU4F1	BRN3A|Oct-T1|RDC-1|brn-3A	POU class 4 homeobox 1	protein-coding	41.61	4.85	8.579381443	3.22E-19
chr13-528	chr13	94984549	94985890	+	22.4	1341	"intron (NM_005708, intron 6 of 8)"	"intron (NM_005708, intron 6 of 8)"	-144974	NR_046535	100873972	Hs.670344	NR_046535	ENSG00000236520	GPC6-AS1	-	GPC6 antisense RNA 1	ncRNA	22.4	4.37	5.125858124	1.32E-07
chr13-530	chr13	95374183	95375183	+	16	1000	Intergenic	Intergenic	9713	NR_046514	100507533	Hs.556071	NR_046514	ENSG00000227640	SOX21-AS1	-	SOX21 antisense RNA 1 (head to head)	ncRNA	16	3.88	4.12371134	7.91E-05
chr13-532	chr13	95465880	95466880	+	17.3	1000	"intron (NR_110754, intron 2 of 4)"	"intron (NR_110754, intron 2 of 4)"	53185	NR_110754	101927284	Hs.551673	NR_110754		LOC101927284	-	uncharacterized LOC101927284	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr13-534	chr13	96272603	96273603	+	16.6	1000	"intron (NM_198968, intron 9 of 22)"	"intron (NM_198968, intron 9 of 22)"	23857	NM_014934	22873	Hs.656580	NM_014934	ENSG00000134874	DZIP1	DZIP|DZIPt1	DAZ interacting zinc finger protein 1	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr13-537	chr13	98527740	98531362	+	49.3	3622	Intergenic	Intergenic	-76378	NM_002271	3843	Hs.712598	NM_002271	ENSG00000065150	IPO5	IMB3|KPNB3|Pse1|RANBP5|imp5	importin 5	protein-coding	49.29	8.25	5.974545455	2.05E-17
chr13-539	chr13	98784048	98785048	+	17.3	1000	Intergenic	Intergenic	-10268	NM_001286839	10160	Hs.403917	NM_005766	ENSG00000152767	FARP1	CDEP|FARP1-IT1|PLEKHC2|PPP1R75	"FERM, ARH/RhoGEF and pleckstrin domain protein 1"	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr13-54	chr13	107125116	107126116	+	23	1000	Intergenic	Intergenic	61772	NM_004093	1948	Hs.149239	NM_004093	ENSG00000125266	EFNB2	EPLG5|HTKL|Htk-L|LERK5	ephrin B2	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr13-542	chr13	99058344	99059344	+	17.3	1000	"intron (NM_005766, intron 13 of 26)"	"intron (NM_005766, intron 13 of 26)"	115535	NM_003576	8428	Hs.508514	NM_003576	ENSG00000102572	STK24	HEL-S-95|MST3|MST3B|STE20|STK3	serine/threonine kinase 24	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr13-543	chr13	99398711	99399711	+	16	1000	"intron (NM_005073, intron 1 of 22)"	"intron (NM_005073, intron 1 of 22)"	5718	NM_005073	6564	Hs.436893	NM_005073	ENSG00000088386	SLC15A1	HPECT1|HPEPT1|PEPT1	solute carrier family 15 member 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr13-547	chr13	103808464	103809721	+	19.8	1257	Intergenic	Intergenic	-89896	NM_000452	6555	Hs.194783	NM_000452	ENSG00000125255	SLC10A2	ASBT|IBAT|ISBT|NTCP2|PBAM	solute carrier family 10 member 2	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr13-550	chr13	107099877	107100877	+	16	1000	Intergenic	L2c|LINE|L2	71466	NR_034119	728192	Hs.559194	NR_034119		LINC00460	-	long intergenic non-protein coding RNA 460	ncRNA	16	2.91	5.498281787	4.98E-06
chr13-551	chr13	109000049	109001049	+	16.6	1000	Intergenic	L1MC3|LINE|L1	78572	NM_006573	10673	Hs.525157	NM_006573	ENSG00000102524	TNFSF13B	BAFF|BLYS|CD257|DTL|TALL-1|TALL1|THANK|TNFSF20|TNLG7A|ZTNF4	tumor necrosis factor superfamily member 13b	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr13-558	chr13	111018007	111019007	+	16.6	1000	"intron (NM_001846, intron 4 of 47)"	"intron (NM_001846, intron 4 of 47)"	25202	NR_107040	102465872		NR_107040	ENSG00000276765	MIR8073	hsa-mir-8073	microRNA 8073	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr13-564	chr13	111130706	111131706	+	16.6	1000	"intron (NM_001846, intron 30 of 47)"	"intron (NM_001846, intron 30 of 47)"	-15572	NM_001267044	100129836	Hs.640035	NM_001267044		COL4A2-AS2	-	COL4A2 antisense RNA 2	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr13-567	chr13	112874132	112875132	+	16.6	1000	Intergenic	Intergenic	22985	NR_108094	101928698	Hs.528451	NR_108094		LINC01070	-	long intergenic non-protein coding RNA 1070	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr13-569	chr13	113290420	113291420	+	16.6	1000	Intergenic	Intergenic	-10438	NM_207440	400165	Hs.591213	NM_207440		ATP11AUN	C13orf35|SMABLO1	ATP11A upstream neighbor	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr13-570	chr13	113327947	113328947	+	16.6	1000	"intron (NM_207440, intron 1 of 2)"	MLT1E1A|LTR|ERVL-MaLR	-16196	NM_032189	23250	Hs.29189	NM_015205	ENSG00000068650	ATP11A	ATPIH|ATPIS	ATPase phospholipid transporting 11A	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr13-574	chr13	113408193	113409949	+	24.3	1756	promoter-TSS (NR_046661)	promoter-TSS (NR_046661)	-26	NR_046661	100874205	Hs.658692	NR_046661	ENSG00000232684	ATP11A-AS1	-	ATP11A antisense RNA 1	ncRNA	24.32	3.4	7.152941176	7.55E-11
chr13-583	chr13	114930837	114932094	+	18.6	1257	Intergenic	Intergenic	-33367	NM_007368	22821	Hs.593075	NM_007368	ENSG00000185989	RASA3	GAP1IP4BP|GAPIII	RAS p21 protein activator 3	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr13-587	chr13	20763929	20769952	+	120.3	6023	"5' UTR (NM_004004, exon 1 of 2)"	"5' UTR (NM_004004, exon 1 of 2)"	174	NM_004004	2706	Hs.524894	NM_004004	ENSG00000165474	GJB2	CX26|DFNA3|DFNA3A|DFNB1|DFNB1A|HID|KID|NSRD1|PPK	gap junction protein beta 2	protein-coding	120.34	18.93	6.357105124	3.84E-43
chr13-590	chr13	20782937	20783937	+	16.6	1000	Intergenic	L5|LINE|RTE	-16323	NM_004004	2706	Hs.524894	NM_004004	ENSG00000165474	GJB2	CX26|DFNA3|DFNA3A|DFNB1|DFNB1A|HID|KID|NSRD1|PPK	gap junction protein beta 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr13-591	chr13	20815207	20816644	+	18.6	1437	Intergenic	Intergenic	-9391	NM_001110219	10804	Hs.511757	NM_006783	ENSG00000121742	GJB6	CX30|DFNA3|DFNA3B|DFNB1B|ECTD2|ED2|EDH|HED|HED2	gap junction protein beta 6	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr13-592	chr13	20928492	20929492	+	15.4	1000	Intergenic	L2a|LINE|L2	78993	NR_039721	100616304		NR_039721	ENSG00000263978	MIR4499	-	microRNA 4499	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr13-593	chr13	22248007	22249007	+	16	1000	"intron (NM_002010, intron 1 of 2)"	CpG	3292	NM_002010	2254	Hs.111	NM_002010	ENSG00000102678	FGF9	FGF-9|GAF|HBFG-9|HBGF-9|SYNS3	fibroblast growth factor 9	protein-coding	16	1.94	8.24742268	7.67E-08
chr13-599	chr13	24258330	24259330	+	16.6	1000	Intergenic	PABL_A-int|LTR|ERV1	105331	NM_001204458	55504	Hs.149168	NM_018647	ENSG00000127863	TNFRSF19	TAJ|TAJ-alpha|TRADE|TROY	TNF receptor superfamily member 19	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr13-605	chr13	24652351	24653351	+	14.7	1000	"intron (NM_001286792, intron 3 of 14)"	"intron (NM_001286792, intron 3 of 14)"	-82004	NM_001166271	221178	Hs.434298	NM_153023	ENSG00000182957	SPATA13	ARHGEF29|ASEF2	spermatogenesis associated 13	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr13-608	chr13	25714366	25715703	+	20.5	1337	Intergenic	AluY|SINE|Alu	31271	NM_199138	219287	Hs.528335	NM_152704	ENSG00000165566	AMER2	FAM123A	APC membrane recruitment protein 2	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr13-609	chr13	25764074	25765374	+	19.2	1300	TTS (NR_120427)	TTS (NR_120427)	9254	NR_120427	102723318	Hs.549877	NR_120427		LINC01053	-	long intergenic non-protein coding RNA 1053	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr13-612	chr13	25976917	25980285	+	41.6	3368	"intron (NM_016529, intron 1 of 36)"	"intron (NM_016529, intron 1 of 36)"	32452	NM_016529	51761	Hs.444957	NM_016529	ENSG00000132932	ATP8A2	ATP|ATPIB|CAMRQ4|IB|ML-1	ATPase phospholipid transporting 8A2	protein-coding	41.61	6.8	6.119117647	3.54E-15
chr13-616	chr13	26358565	26359565	+	15.4	1000	"intron (NM_001313741, intron 27 of 35)"	AluSg|SINE|Alu	266133	NM_001007538	387914	Hs.433791	NM_001007538	ENSG00000180730	SHISA2	C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa	shisa family member 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr13-617	chr13	26667138	26668138	+	16.6	1000	Intergenic	L1MB7|LINE|L1	-42440	NM_001007538	387914	Hs.433791	NM_001007538	ENSG00000180730	SHISA2	C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa	shisa family member 2	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr13-618	chr13	28484576	28485852	+	19.8	1276	"intron (NR_047484, intron 1 of 3)"	AluSz|SINE|Alu	-8954	NM_000209	3651	Hs.32938	NM_000209	ENSG00000139515	PDX1	GSF|IDX-1|IPF1|IUF1|MODY4|PAGEN1|PDX-1|STF-1	pancreatic and duodenal homeobox 1	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr13-619	chr13	28495529	28497562	+	36.5	2033	"intron (NM_000209, intron 1 of 1)"	"intron (NM_000209, intron 1 of 1)"	-1004	NR_047484	100861550	Hs.416201	NR_047484		PDX1-AS1	HI-LNC71|PLUTO	PDX1 antisense RNA 1	ncRNA	36.48	5.34	6.831460674	1.37E-14
chr13-62	chr13	24087780	24089039	+	23.7	1259	Intergenic	MIR|SINE|MIR	44758	NR_038995	100506697	Hs.50118	NR_038995	ENSG00000232977	LINC00327	NCRNA00327	long intergenic non-protein coding RNA 327	ncRNA	23.68	3.88	6.103092784	4.22E-09
chr13-63	chr13	26038016	26039276	+	26.9	1260	"intron (NM_016529, intron 1 of 36)"	"intron (NM_016529, intron 1 of 36)"	-4266	NM_001313741	51761	Hs.444957	NM_016529	ENSG00000132932	ATP8A2	ATP|ATPIB|CAMRQ4|IB|ML-1	ATPase phospholipid transporting 8A2	protein-coding	26.88	4.85	5.542268041	7.61E-10
chr13-632	chr13	30280200	30281200	+	16	1000	Intergenic	Intergenic	58870	NR_135320	102723345	Hs.121353	NR_135320		LOC102723345	-	uncharacterized LOC102723345	ncRNA	16	1.94	8.24742268	7.67E-08
chr13-635	chr13	31585740	31586740	+	16	1000	Intergenic	Intergenic	79406	NM_152325	122046	Hs.124463	NM_152325	ENSG00000175664	TEX26	C13orf26	testis expressed 26	protein-coding	16	2.91	5.498281787	4.98E-06
chr13-637	chr13	31663858	31664858	+	16	1000	Intergenic	MIR3|SINE|MIR	71800	NM_001286503	10808	Hs.743267	NM_006644	ENSG00000120694	HSPH1	HSP105|HSP105A|HSP105B|NY-CO-25	heat shock protein family H (Hsp110) member 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr13-638	chr13	31775797	31776797	+	16.6	1000	"intron (NM_194318, intron 1 of 14)"	"intron (NM_194318, intron 1 of 14)"	2185	NM_194318	145173	Hs.13205	NM_194318	ENSG00000187676	B3GLCT	B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T	beta 3-glucosyltransferase	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr13-639	chr13	31961964	31963232	+	16.6	1268	Intergenic	AluSp|SINE|Alu	188486	NM_194318	145173	Hs.13205	NM_194318	ENSG00000187676	B3GLCT	B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T	beta 3-glucosyltransferase	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr13-640	chr13	32420915	32422582	+	25.6	1667	"intron (NR_027062, intron 1 of 3)"	"intron (NR_027062, intron 1 of 3)"	828	NR_027062	196549	Hs.507667	NM_145293		EEF1DP3	-	eukaryotic translation elongation factor 1 delta pseudogene 3	pseudo	25.6	1.46	17.53424658	1.83E-18
chr13-641	chr13	32603131	32606653	+	59.5	3522	promoter-TSS (NM_023037)	promoter-TSS (NM_023037)	-545	NM_023037	10129	Hs.507669	NM_023037	ENSG00000073910	FRY	13CDNA73|214K23.2|C13orf14|CG003|bA207N4.2|bA37E23.1	FRY microtubule binding protein	protein-coding	59.53	12.62	4.717115689	6.23E-17
chr13-643	chr13	33834436	33835436	+	16.6	1000	"intron (NM_001243476, intron 5 of 17)"	"intron (NM_001243476, intron 5 of 17)"	-16755	NR_046693	100874241	Hs.662433	NR_046693	ENSG00000236581	STARD13-AS	STARD13-AS2	STARD13 antisense RNA	ncRNA	16.64	0	17.14115603	3.68E-16
chr13-646	chr13	40769951	40771313	+	21.8	1362	"intron (NR_033877, intron 5 of 5)"	"intron (NR_033877, intron 5 of 5)"	14686	NR_046870	100874127	Hs.578028	NR_046870	ENSG00000230710	LINC00332	NCRNA00332	long intergenic non-protein coding RNA 332	ncRNA	21.76	2.91	7.47766323	3.87E-10
chr13-647	chr13	40925595	40926595	+	16	1000	"intron (NR_024506, intron 5 of 5)"	"intron (NR_024506, intron 5 of 5)"	129048	NR_024505	646982	Hs.287664	NR_024505	ENSG00000215483	LINC00598	-	long intergenic non-protein coding RNA 598	ncRNA	16	2.91	5.498281787	4.98E-06
chr13-649	chr13	41067014	41068014	+	16	1000	Intergenic	MER45A|DNA|hAT-Tip100	-12371	NR_024506	646982	Hs.287664	NR_024505	ENSG00000215483	LINC00598	-	long intergenic non-protein coding RNA 598	ncRNA	16	3.88	4.12371134	7.91E-05
chr13-650	chr13	41122934	41123934	+	16	1000	Intergenic	Intergenic	-68291	NR_024506	646982	Hs.287664	NR_024505	ENSG00000215483	LINC00598	-	long intergenic non-protein coding RNA 598	ncRNA	16	1.94	8.24742268	7.67E-08
chr13-654	chr13	43878120	43879120	+	16	1000	"intron (NM_017993, intron 11 of 16)"	"intron (NM_017993, intron 11 of 16)"	-144368	NR_120399	100874130	Hs.738887	NR_120399		ENOX1-AS2	-	ENOX1 antisense RNA 2	ncRNA	16	2.91	5.498281787	4.98E-06
chr13-655	chr13	44023162	44024162	+	16	1000	"intron (NR_120399, intron 1 of 3)"	"intron (NR_120399, intron 1 of 3)"	674	NR_120399	100874130	Hs.738887	NR_120399		ENOX1-AS2	-	ENOX1 antisense RNA 2	ncRNA	16	0.49	32.65306122	1.26E-14
chr13-658	chr13	44785378	44786378	+	15.4	1000	Intergenic	Intergenic	-15542	NR_107046	102465876		NR_107046	ENSG00000276319	MIR8079	hsa-mir-8079	microRNA 8079	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr13-659	chr13	45268520	45269520	+	16.6	1000	Intergenic	Intergenic	114746	NR_038433	144817	Hs.585616	NR_038433	ENSG00000235097	LINC00330	NCRNA00330	long intergenic non-protein coding RNA 330	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr13-662	chr13	45408482	45409771	+	19.2	1289	Intergenic	Intergenic	-25360	NR_038433	144817	Hs.585616	NR_038433	ENSG00000235097	LINC00330	NCRNA00330	long intergenic non-protein coding RNA 330	ncRNA	19.2	0.97	19.79381443	5.65E-15
chr13-666	chr13	46393514	46394848	+	20.5	1334	"intron (NM_198849, intron 1 of 1)"	MLT1A1|LTR|ERVL-MaLR	31665	NM_198849	283514	Hs.368483	NM_198849	ENSG00000215475	SIAH3	-	siah E3 ubiquitin protein ligase family member 3	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr13-667	chr13	46412254	46413254	+	16	1000	"intron (NM_198849, intron 1 of 1)"	"intron (NM_198849, intron 1 of 1)"	13092	NM_198849	283514	Hs.368483	NM_198849	ENSG00000215475	SIAH3	-	siah E3 ubiquitin protein ligase family member 3	protein-coding	16	1.94	8.24742268	7.67E-08
chr13-669	chr13	46446583	46447583	+	16.6	1000	Intergenic	Intergenic	-21237	NM_198849	283514	Hs.368483	NM_198849	ENSG00000215475	SIAH3	-	siah E3 ubiquitin protein ligase family member 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr13-672	chr13	51795106	51800337	+	78.1	5231	"intron (NM_001330522, intron 1 of 2)"	"intron (NM_001330522, intron 1 of 2)"	1251	NM_145019	220108	Hs.71913	NM_145019	ENSG00000150510	FAM124A	-	family with sequence similarity 124 member A	protein-coding	78.09	16.99	4.596233078	1.35E-21
chr13-673	chr13	51817983	51818983	+	16	1000	"intron (NM_001330522, intron 2 of 2)"	L2a|LINE|L2	22013	NM_145019	220108	Hs.71913	NM_145019	ENSG00000150510	FAM124A	-	family with sequence similarity 124 member A	protein-coding	16	2.91	5.498281787	4.98E-06
chr13-674	chr13	51857594	51858594	+	16.6	1000	"3' UTR (NM_001242312, exon 4 of 4)"	"3' UTR (NM_001242312, exon 4 of 4)"	-57074	NM_001101320	647174	Hs.685891	NM_001101320	ENSG00000253309	SERPINE3	-	serpin family E member 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr13-678	chr13	52509132	52510489	+	22.4	1357	"exon (NM_001243182, exon 21 of 22)"	"exon (NM_001243182, exon 21 of 22)"	73726	NM_031290	83446	Hs.120573	NM_031290	ENSG00000123171	CCDC70	-	coiled-coil domain containing 70	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr13-680	chr13	52584431	52585981	+	29.4	1550	"intron (NM_001330578, intron 1 of 19)"	"intron (NM_001330578, intron 1 of 19)"	424	NM_001330578	540	Hs.492280	NM_000053	ENSG00000123191	ATP7B	PWD|WC1|WD|WND	ATPase copper transporting beta	protein-coding	29.44	4.85	6.070103093	2.13E-11
chr13-687	chr13	75136661	75137661	+	14.7	1000	Intergenic	Intergenic	10181	NR_034024	338864	Hs.97408	NR_034024	ENSG00000236678	LINC00347	-	long intergenic non-protein coding RNA 347	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr13-689	chr13	75797552	75798552	+	15.4	1000	Intergenic	Intergenic	16465	NR_027466	647288	Hs.567920	NR_027466	ENSG00000214249	CTAGE11P	-	"CTAGE family member 11, pseudogene"	pseudo	15.36	1.94	7.917525773	7.67E-08
chr13-69	chr13	106562875	106565090	+	38.4	2215	Intergenic	Intergenic	204803	NR_046391	144920	Hs.567700	NR_046391		LINC00343	LINC00344|NCRNA00343|NCRNA00344	long intergenic non-protein coding RNA 343	ncRNA	38.4	4.85	7.917525773	2.24E-17
chr13-692	chr13	92047422	92048422	+	16	1000	Intergenic	AluSg|SINE|Alu	-2951	NM_004466	2262	Hs.655675	NM_004466	ENSG00000179399	GPC5	-	glypican 5	protein-coding	16	3.4	4.705882353	2.25E-05
chr13-693	chr13	95413593	95414593	+	16	1000	"intron (NR_110754, intron 1 of 4)"	"intron (NR_110754, intron 1 of 4)"	898	NR_110754	101927284	Hs.551673	NR_110754		LOC101927284	-	uncharacterized LOC101927284	ncRNA	16	3.88	4.12371134	7.91E-05
chr13-695	chr13	95532885	95533885	+	15.4	1000	"intron (NR_110754, intron 2 of 4)"	"intron (NR_110754, intron 2 of 4)"	-78910	NR_047487	100861544	Hs.48706	NR_047487	ENSG00000260962	LINC00557	-	long intergenic non-protein coding RNA 557	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr13-696	chr13	96041043	96042043	+	16	1000	Intergenic	L1MB1|LINE|L1	-44310	NM_182848	9071	Hs.534377	NM_006984	ENSG00000134873	CLDN10	CPETRL3|OSP-L	claudin 10	protein-coding	16	3.88	4.12371134	7.91E-05
chr13-697	chr13	97854760	97855760	+	16.6	1000	Intergenic	Intergenic	-19283	NM_001306070	10150	Hs.657347	NM_144778	ENSG00000139793	MBNL2	MBLL|MBLL39|PRO2032	muscleblind like splicing regulator 2	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr13-705	chr13	102766551	102767551	+	16	1000	"intron (NM_001321945, intron 2 of 5)"	L1MB1|LINE|L1	-68697	NR_039854	100616239		NR_039854	ENSG00000264482	MIR4705	-	microRNA 4705	ncRNA	16	2.91	5.498281787	4.98E-06
chr13-707	chr13	103119453	103120453	+	16	1000	Intergenic	L1MEg2|LINE|L1	-65175	NM_001321949	2259	Hs.508616	NM_004115	ENSG00000102466	FGF14	FGF-14|FHF-4|FHF4|SCA27	fibroblast growth factor 14	protein-coding	16	3.88	4.12371134	7.91E-05
chr13-713	chr13	110783046	110784883	+	28.8	1837	Intergenic	Intergenic	78332	NR_126387	104355146	Hs.508690	NR_126387	ENSG00000231428	LINC00396	-	long intergenic non-protein coding RNA 396	ncRNA	28.8	2.91	9.896907216	7.24E-15
chr13-715	chr13	110816569	110818082	+	21.8	1513	"exon (NM_001845, exon 46 of 52)"	"exon (NM_001845, exon 46 of 52)"	111693	NR_126387	104355146	Hs.508690	NR_126387	ENSG00000231428	LINC00396	-	long intergenic non-protein coding RNA 396	ncRNA	21.76	4.85	4.486597938	5.54E-07
chr13-718	chr13	111033186	111034186	+	16.6	1000	"intron (NM_001846, intron 4 of 47)"	"intron (NM_001846, intron 4 of 47)"	40381	NR_107040	102465872		NR_107040	ENSG00000276765	MIR8073	hsa-mir-8073	microRNA 8073	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr13-723	chr13	111213330	111216227	+	46.1	2897	promoter-TSS (NM_017817)	promoter-TSS (NM_017817)	-694	NM_017817	55647	Hs.743563	NM_017817	ENSG00000139832	RAB20	-	"RAB20, member RAS oncogene family"	protein-coding	46.09	2.91	15.83848797	2.09E-30
chr13-728	chr13	111749005	111750005	+	16	1000	"intron (NR_120415, intron 2 of 2)"	Charlie4z|DNA|hAT-Charlie	1320	NR_120415	101927802	Hs.559193	NR_120415		LINC00368	-	long intergenic non-protein coding RNA 368	ncRNA	16	1.94	8.24742268	7.67E-08
chr13-731	chr13	113044022	113045361	+	21.8	1339	"intron (NM_145248, intron 1 of 6)"	MER31-int|LTR|ERV1	14040	NM_145248	122258	Hs.97592	NM_145248	ENSG00000153498	SPACA7	C13orf28	sperm acrosome associated 7	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr13-733	chr13	113504882	113506328	+	24.3	1446	"intron (NM_032189, intron 18 of 28)"	"intron (NM_032189, intron 18 of 28)"	-96560	NR_046661	100874205	Hs.658692	NR_046661	ENSG00000232684	ATP11A-AS1	-	ATP11A antisense RNA 1	ncRNA	24.32	2.43	10.00823045	2.59E-13
chr13-737	chr13	114471832	114473099	+	20.5	1267	"intron (NM_182614, intron 3 of 8)"	"intron (NM_182614, intron 3 of 8)"	10249	NM_182614	348013	Hs.280805	NM_182614	ENSG00000184497	TMEM255B	FAM70B	transmembrane protein 255B	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr13-745	chr13	20718226	20719226	+	15.4	1000	"intron (NM_021954, intron 1 of 1)"	"intron (NM_021954, intron 1 of 1)"	16457	NM_021954	2700	Hs.130313	NM_021954	ENSG00000121743	GJA3	CTRCT14|CX46|CZP3	gap junction protein alpha 3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr13-749	chr13	20893769	20895339	+	23	1570	Intergenic	Intergenic	-88020	NM_001110219	10804	Hs.511757	NM_006783	ENSG00000121742	GJB6	CX30|DFNA3|DFNA3B|DFNB1B|ECTD2|ED2|EDH|HED|HED2	gap junction protein beta 6	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr13-750	chr13	20900507	20901507	+	15.4	1000	Intergenic	Intergenic	-94473	NM_001110219	10804	Hs.511757	NM_006783	ENSG00000121742	GJB6	CX30|DFNA3|DFNA3B|DFNB1B|ECTD2|ED2|EDH|HED|HED2	gap junction protein beta 6	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr13-755	chr13	22670832	22671832	+	15.4	1000	Intergenic	Intergenic	-113092	NR_103810	100506622	Hs.255773	NR_103810	ENSG00000276476	LINC00540	-	long intergenic non-protein coding RNA 540	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr13-757	chr13	24006046	24008251	+	41	2205	"intron (NM_014363, intron 1 of 9)"	"intron (NM_014363, intron 1 of 9)"	719	NM_014363	26278	Hs.159492	NM_014363	ENSG00000151835	SACS	ARSACS|DNAJC29|PPP1R138|SPAX6	sacsin molecular chaperone	protein-coding	40.97	3.88	10.55927835	5.31E-22
chr13-763	chr13	25591381	25592901	+	25	1520	Intergenic	CpG	-49534	NR_026730	646405	Hs.620592	NM_001126062		TPTE2P1	-	transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1	pseudo	24.96	0.97	25.73195876	2.01E-20
chr13-764	chr13	25629152	25630152	+	17.3	1000	Intergenic	L1PB1|LINE|L1	-40624	NM_030979	5042	Hs.458280	NM_030979	ENSG00000151846	PABPC3	PABP3|PABPL3|tPABP	poly(A) binding protein cytoplasmic 3	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr13-771	chr13	26366364	26367364	+	16	1000	"intron (NM_001313741, intron 27 of 35)"	AluJo|SINE|Alu	258334	NM_001007538	387914	Hs.433791	NM_001007538	ENSG00000180730	SHISA2	C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa	shisa family member 2	protein-coding	16	2.43	6.58436214	7.90E-07
chr13-772	chr13	26372833	26373833	+	16	1000	"intron (NM_001313741, intron 27 of 35)"	MER34|LTR|ERV1	251865	NM_001007538	387914	Hs.433791	NM_001007538	ENSG00000180730	SHISA2	C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa	shisa family member 2	protein-coding	16	2.43	6.58436214	7.90E-07
chr13-773	chr13	26599746	26600746	+	15.4	1000	TTS (NM_001313741)	TTS (NM_001313741)	24952	NM_001007538	387914	Hs.433791	NM_001007538	ENSG00000180730	SHISA2	C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa	shisa family member 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr13-779	chr13	27969397	27970397	+	14.7	1000	Intergenic	Intergenic	-28784	NM_002097	2971	Hs.445977	NM_002097	ENSG00000122034	GTF3A	AP2|TFIIIA	general transcription factor IIIA	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr13-784	chr13	28476324	28477324	+	15.4	1000	"intron (NR_047484, intron 1 of 3)"	"intron (NR_047484, intron 1 of 3)"	-17344	NM_000209	3651	Hs.32938	NM_000209	ENSG00000139515	PDX1	GSF|IDX-1|IPF1|IUF1|MODY4|PAGEN1|PDX-1|STF-1	pancreatic and duodenal homeobox 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr13-788	chr13	28674816	28675816	+	16.6	1000	promoter-TSS (NM_004119)	promoter-TSS (NM_004119)	-587	NR_130706	2322	Hs.507590	NM_004119	ENSG00000122025	FLT3	CD135|FLK-2|FLK2|STK1	fms related tyrosine kinase 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr13-79	chr13	25501532	25502532	+	21.1	1000	TTS (NR_026730)	TTS (NR_026730)	-5005	NR_047594	55835	Hs.513379	NM_018451	ENSG00000151849	CENPJ	BM032|CENP-J|CPAP|LAP|LIP1|MCPH6|SASS4|SCKL4|Sas-4	centromere protein J	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr13-790	chr13	29139970	29140970	+	14.7	1000	Intergenic	Intergenic	-71205	NM_001160030	2321	Hs.594454	NM_002019	ENSG00000102755	FLT1	FLT|FLT-1|VEGFR-1|VEGFR1	fms related tyrosine kinase 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr13-794	chr13	30035949	30036949	+	15.4	1000	"intron (NM_001033602, intron 7 of 13)"	L2a|LINE|L2	25438	NR_046378	100874107	Hs.577987	NR_046378		MTUS2-AS1	-	MTUS2 antisense RNA 1	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr13-799	chr13	30435280	30436682	+	22.4	1402	Intergenic	MER91C|DNA|hAT-Tip100	-11161	NM_007106	5412	Hs.145575	NM_007106	ENSG00000122042	UBL3	HCG-1|PNSC1	ubiquitin like 3	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr13-8	chr13	52579008	52581281	+	54.4	2273	"intron (NM_001330578, intron 1 of 19)"	MER9a2|LTR|ERVK	5486	NM_001330578	540	Hs.492280	NM_000053	ENSG00000123191	ATP7B	PWD|WC1|WD|WND	ATPase copper transporting beta	protein-coding	54.41	9.71	5.603501545	3.95E-18
chr13-80	chr13	25985454	25986724	+	24.3	1270	"intron (NM_016529, intron 1 of 36)"	Helitron3Na_Mam|RC|Helitron	39940	NM_016529	51761	Hs.444957	NM_016529	ENSG00000132932	ATP8A2	ATP|ATPIB|CAMRQ4|IB|ML-1	ATPase phospholipid transporting 8A2	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr13-800	chr13	30477721	30478721	+	15.4	1000	Intergenic	Intergenic	-15679	NR_046510	100874059	Hs.569261	NR_046510	ENSG00000224329	LINC00297	NCRNA00297	long intergenic non-protein coding RNA 297	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr13-802	chr13	30612925	30613925	+	15.4	1000	Intergenic	Intergenic	69587	NR_046998	100874146	Hs.574116	NR_046998	ENSG00000224511	LINC00365	-	long intergenic non-protein coding RNA 365	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr13-807	chr13	31541516	31542516	+	16	1000	"intron (NM_152325, intron 5 of 6)"	"intron (NM_152325, intron 5 of 6)"	35182	NM_152325	122046	Hs.124463	NM_152325	ENSG00000175664	TEX26	C13orf26	testis expressed 26	protein-coding	16	3.88	4.12371134	7.91E-05
chr13-808	chr13	31558331	31559606	+	19.2	1275	Intergenic	L1ME1|LINE|L1	52134	NM_152325	122046	Hs.124463	NM_152325	ENSG00000175664	TEX26	C13orf26	testis expressed 26	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr13-810	chr13	31675289	31678741	+	43.5	3452	Intergenic	L2b|LINE|L2	59143	NM_001286503	10808	Hs.743267	NM_006644	ENSG00000120694	HSPH1	HSP105|HSP105A|HSP105B|NY-CO-25	heat shock protein family H (Hsp110) member 1	protein-coding	43.53	10.19	4.271835132	6.58E-12
chr13-816	chr13	31981052	31982052	+	15.4	1000	Intergenic	Intergenic	207440	NM_194318	145173	Hs.13205	NM_194318	ENSG00000187676	B3GLCT	B3GALTL|B3GTL|B3Glc-T|Gal-T|beta3Glc-T	beta 3-glucosyltransferase	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr13-818	chr13	32618837	32619837	+	16	1000	"intron (NM_023037, intron 1 of 60)"	"intron (NM_023037, intron 1 of 60)"	-13561	NR_103839	100507099	Hs.536364	NR_103839		FRY-AS1	-	FRY antisense RNA 1	ncRNA	16	3.4	4.705882353	2.25E-05
chr13-82	chr13	29107100	29108360	+	23	1260	Intergenic	AluJr|SINE|Alu	-38465	NM_001160030	2321	Hs.594454	NM_002019	ENSG00000102755	FLT1	FLT|FLT-1|VEGFR-1|VEGFR1	fms related tyrosine kinase 1	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr13-823	chr13	35217322	35218322	+	15.4	1000	Intergenic	Intergenic	-3000	NR_047036	100874179	Hs.569253	NR_047036	ENSG00000225179	LINC00457	-	long intergenic non-protein coding RNA 457	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr13-824	chr13	37498755	37499755	+	16	1000	Intergenic	Intergenic	-4846	NM_005905	4093	Hs.123119	NM_005905	ENSG00000120693	SMAD9	MADH6|MADH9|PPH2|SMAD8|SMAD8/9|SMAD8A|SMAD8B	SMAD family member 9	protein-coding	16	3.4	4.705882353	2.25E-05
chr13-832	chr13	41139602	41140602	+	14.7	1000	"intron (NM_002015, intron 1 of 2)"	"intron (NM_002015, intron 1 of 2)"	-84959	NR_024506	646982	Hs.287664	NR_024505	ENSG00000215483	LINC00598	-	long intergenic non-protein coding RNA 598	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr13-834	chr13	43145176	43146176	+	16	1000	"intron (NM_033012, intron 2 of 6)"	AluJo|SINE|Alu	-2615	NM_003701	8600	Hs.333791	NM_003701	ENSG00000120659	TNFSF11	CD254|ODF|OPGL|OPTB2|RANKL|TNLG6B|TRANCE|hRANKL2|sOdf	tumor necrosis factor superfamily member 11	protein-coding	16	2.91	5.498281787	4.98E-06
chr13-835	chr13	43231294	43232294	+	16	1000	Intergenic	Intergenic	83503	NM_003701	8600	Hs.333791	NM_003701	ENSG00000120659	TNFSF11	CD254|ODF|OPGL|OPTB2|RANKL|TNLG6B|TRANCE|hRANKL2|sOdf	tumor necrosis factor superfamily member 11	protein-coding	16	3.88	4.12371134	7.91E-05
chr13-836	chr13	44679887	44681253	+	22.4	1366	"non-coding (NR_132368, exon 4 of 4)"	"non-coding (NR_132368, exon 4 of 4)"	-4115	NR_104065	101929212	Hs.534877	NR_104064	ENSG00000227258	SMIM2-AS1	C13orf44-AS1|C3orf81-AS1	SMIM2 antisense RNA 1	ncRNA	22.4	4.85	4.618556701	5.54E-07
chr13-838	chr13	45394336	45395336	+	16	1000	Intergenic	LTR33A|LTR|ERVL	-11070	NR_038433	144817	Hs.585616	NR_038433	ENSG00000235097	LINC00330	NCRNA00330	long intergenic non-protein coding RNA 330	ncRNA	16	0.97	16.49484536	3.54E-11
chr13-840	chr13	46284785	46285785	+	16	1000	"intron (NM_001286342, intron 2 of 2)"	"intron (NM_001286342, intron 2 of 2)"	8681	NM_001286342	220082	Hs.186363	NM_152719	ENSG00000174015	SPERT	CBY2|NURIT	spermatid associated	protein-coding	16	3.4	4.705882353	2.25E-05
chr13-842	chr13	46960123	46962627	+	58.9	2504	"5' UTR (NM_001286766, exon 1 of 13)"	"5' UTR (NM_001286766, exon 1 of 13)"	260	NM_001286762	80183	Hs.98117	NM_025113	ENSG00000102445	RUBCNL	C13orf18|KIAA0226L	RUN and cysteine rich domain containing beclin 1 interacting protein like	protein-coding	58.89	5.34	11.02808989	1.04E-31
chr13-844	chr13	51684968	51686436	+	19.2	1468	"intron (NR_102432, intron 1 of 3)"	"intron (NR_102432, intron 1 of 3)"	-45409	NR_003923	2974	Hs.411573	NM_004129	ENSG00000123201	GUCY1B2	GC-SB2	guanylate cyclase 1 soluble subunit beta 2 (pseudogene)	pseudo	19.2	1.94	9.896907216	9.57E-11
chr13-856	chr13	53351026	53352026	+	14.7	1000	Intergenic	Intergenic	-32659	NR_031582	100313778		NR_031582	ENSG00000211579	MIR759	hsa-mir-759	microRNA 759	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr13-858	chr13	53465833	53467696	+	32	1863	Intergenic	Intergenic	-43989	NM_002590	5100	Hs.19492	NM_002590	ENSG00000136099	PCDH8	ARCADLIN|PAPC	protocadherin 8	protein-coding	32	2.91	10.99656357	6.10E-18
chr13-86	chr13	111023970	111025223	+	22.4	1253	"intron (NM_001846, intron 4 of 47)"	"intron (NM_001846, intron 4 of 47)"	31291	NR_107040	102465872		NR_107040	ENSG00000276765	MIR8073	hsa-mir-8073	microRNA 8073	ncRNA	22.4	3.88	5.773195876	2.53E-08
chr13-861	chr13	59509010	59510304	+	21.8	1294	Intergenic	Intergenic	-702406	NR_132367	106144531	Hs.736640	NR_132367	ENSG00000232954	LINC00374	-	long intergenic non-protein coding RNA 374	ncRNA	21.76	3.88	5.608247423	2.53E-08
chr13-864	chr13	60779896	60780896	+	15.4	1000	Intergenic	Intergenic	-42277	NM_001258369	81624	Hs.283127	NM_030932	ENSG00000139734	DIAPH3	AN|AUNA1|DIA2|DRF3|NSDAN|diap3|mDia2	diaphanous related formin 3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr13-866	chr13	75789581	75790581	+	13.4	1000	Intergenic	Intergenic	24436	NR_027466	647288	Hs.567920	NR_027466	ENSG00000214249	CTAGE11P	-	"CTAGE family member 11, pseudogene"	pseudo	13.44	1.94	6.927835052	4.51E-06
chr13-869	chr13	78143840	78144840	+	15.4	1000	"intron (NM_001160706, intron 8 of 30)"	"intron (NM_001160706, intron 8 of 30)"	34531	NM_001160706	8796	Hs.534699	NM_003843	ENSG00000136155	SCEL	-	sciellin	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr13-870	chr13	78716969	78717969	+	16	1000	"intron (NR_047001, intron 1 of 5)"	"intron (NR_047001, intron 1 of 5)"	88479	NR_047001	100874222	Hs.493062	NR_047001	ENSG00000234377	RNF219-AS1	POU4F1-AS1	RNF219 antisense RNA 1	ncRNA	16	3.4	4.705882353	2.25E-05
chr13-871	chr13	94987697	94989018	+	17.9	1321	"intron (NM_005708, intron 6 of 8)"	"intron (NM_005708, intron 6 of 8)"	143579	NM_001129889	1638	Hs.301865	NM_001922	ENSG00000080166	DCT	TRP-2|TYRP2	dopachrome tautomerase	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr13-872	chr13	96095093	96096093	+	15.4	1000	"intron (NM_182848, intron 1 of 4)"	"intron (NM_182848, intron 1 of 4)"	9740	NM_001160100	9071	Hs.534377	NM_006984	ENSG00000134873	CLDN10	CPETRL3|OSP-L	claudin 10	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr13-874	chr13	98028884	98029884	+	15.4	1000	"intron (NM_144778, intron 8 of 8)"	MIRb|SINE|MIR	-57091	NM_021033	5911	Hs.508480	NM_021033	ENSG00000125249	RAP2A	K-REV|KREV|RAP2|RbBP-30	"RAP2A, member of RAS oncogene family"	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr13-875	chr13	98286979	98287979	+	14.7	1000	Intergenic	Intergenic	201004	NM_021033	5911	Hs.508480	NM_021033	ENSG00000125249	RAP2A	K-REV|KREV|RAP2|RbBP-30	"RAP2A, member of RAS oncogene family"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr13-883	chr13	98882002	98883002	+	14.7	1000	"intron (NM_005766, intron 2 of 26)"	"intron (NM_005766, intron 2 of 26)"	21724	NR_036129	100422881		NR_036129	ENSG00000263399	MIR3170	mir-3170	microRNA 3170	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr13-884	chr13	98935321	98936321	+	16	1000	"intron (NM_005766, intron 2 of 26)"	"intron (NM_005766, intron 2 of 26)"	75043	NR_036129	100422881		NR_036129	ENSG00000263399	MIR3170	mir-3170	microRNA 3170	ncRNA	16	1.94	8.24742268	7.67E-08
chr13-89	chr13	113609700	113610959	+	25	1259	Intergenic	Intergenic	12623	NR_034002	100289410	Hs.667436	NR_034002		MCF2L-AS1	-	MCF2L antisense RNA 1	ncRNA	24.96	0.97	25.73195876	2.01E-20
chr13-892	chr13	103051927	103053649	+	26.2	1722	"intron (NM_001321942, intron 1 of 5)"	CpG	1336	NM_175929	2259	Hs.508616	NM_004115	ENSG00000102466	FGF14	FGF-14|FHF-4|FHF4|SCA27	fibroblast growth factor 14	protein-coding	26.24	3.4	7.717647059	9.95E-12
chr13-895	chr13	106556937	106558548	+	25	1611	Intergenic	L3|LINE|CR1	198563	NR_046391	144920	Hs.567700	NR_046391		LINC00343	LINC00344|NCRNA00343|NCRNA00344	long intergenic non-protein coding RNA 343	ncRNA	24.96	2.91	8.577319588	5.77E-12
chr13-898	chr13	110395653	110397012	+	22.4	1359	Intergenic	Intergenic	15711	NR_103846	101409253	Hs.578072	NR_103846	ENSG00000234854	LINC00676	-	long intergenic non-protein coding RNA 676	ncRNA	22.4	3.88	5.773195876	2.53E-08
chr13-909	chr13	111048831	111050186	+	21.1	1355	"intron (NM_001846, intron 4 of 47)"	"intron (NM_001846, intron 4 of 47)"	56203	NR_107040	102465872		NR_107040	ENSG00000276765	MIR8073	hsa-mir-8073	microRNA 8073	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr13-910	chr13	111076251	111081046	+	86.4	4795	"intron (NM_001846, intron 6 of 47)"	"intron (NM_001846, intron 6 of 47)"	36986	NM_001267044	100129836	Hs.640035	NM_001267044		COL4A2-AS2	-	COL4A2 antisense RNA 2	protein-coding	86.41	15.05	5.741528239	1.31E-28
chr13-912	chr13	111105807	111107365	+	21.8	1558	"intron (NM_001846, intron 20 of 47)"	"intron (NM_001846, intron 20 of 47)"	9048	NM_001267044	100129836	Hs.640035	NM_001267044		COL4A2-AS2	-	COL4A2 antisense RNA 2	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr13-914	chr13	111175034	111176034	+	16	1000	"3' UTR (NM_017817, exon 2 of 2)"	"3' UTR (NM_017817, exon 2 of 2)"	-15008	NR_046583	100874203	Hs.508716	NR_046583	ENSG00000232814	COL4A2-AS1	-	COL4A2 antisense RNA 1	ncRNA	16	1.94	8.24742268	7.67E-08
chr13-92	chr13	25321870	25323122	+	22.4	1252	Intergenic	Intergenic	-15805	NM_001184993	56163	Hs.97464	NM_031277	ENSG00000132972	RNF17	Mmip-2|SPATA23|TDRD4	ring finger protein 17	protein-coding	22.4	1.46	15.34246575	8.59E-15
chr13-920	chr13	111632129	111633129	+	14.7	1000	"intron (NR_126378, intron 1 of 1)"	"intron (NR_126378, intron 1 of 1)"	14255	NR_126378	104355135	Hs.649708	NR_126378		LINC00431	-	long intergenic non-protein coding RNA 431	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr13-926	chr13	112569709	112570709	+	16	1000	Intergenic	Intergenic	22399	NR_120401	101928616	Hs.528450	NR_046992		LINC00354	-	long intergenic non-protein coding RNA 354	ncRNA	16	1.94	8.24742268	7.67E-08
chr13-931	chr13	113374996	113376308	+	17.9	1312	"intron (NM_032189, intron 1 of 28)"	"intron (NM_032189, intron 1 of 28)"	31009	NM_015205	23250	Hs.29189	NM_015205	ENSG00000068650	ATP11A	ATPIH|ATPIS	ATPase phospholipid transporting 11A	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr13-934	chr13	113471901	113472901	+	15.4	1000	"intron (NM_032189, intron 6 of 28)"	"intron (NM_032189, intron 6 of 28)"	-63356	NR_046661	100874205	Hs.658692	NR_046661	ENSG00000232684	ATP11A-AS1	-	ATP11A antisense RNA 1	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr13-935	chr13	113489357	113490357	+	16	1000	"intron (NM_032189, intron 15 of 28)"	"intron (NM_032189, intron 15 of 28)"	-80812	NR_046661	100874205	Hs.658692	NR_046661	ENSG00000232684	ATP11A-AS1	-	ATP11A antisense RNA 1	ncRNA	16	0	16.4818808	1.26E-14
chr13-937	chr13	113560270	113561270	+	14.7	1000	Intergenic	Intergenic	62182	NR_034002	100289410	Hs.667436	NR_034002		MCF2L-AS1	-	MCF2L antisense RNA 1	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr13-939	chr13	113805966	113806966	+	15.4	1000	Intergenic	Intergenic	-6502	NM_003891	8858	Hs.1011	NM_003891	ENSG00000126231	PROZ	PZ	"protein Z, vitamin K dependent plasma glycoprotein"	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr13-941	chr13	114058010	114059010	+	14.1	1000	"exon (NM_001304433, exon 2 of 2)"	"exon (NM_001304433, exon 2 of 2)"	10198	NM_001304433	101928841	Hs.646609	NM_001003399		LOC101928841	-	collagen alpha-1(II) chain-like	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr13-945	chr13	114587331	114592563	+	76.8	5232	Intergenic	Intergenic	-3488	NR_047035	100874178	Hs.547957	NR_047035		LINC00454	-	long intergenic non-protein coding RNA 454	ncRNA	76.81	14.56	5.275412088	3.85E-24
chr13-95	chr13	28397493	28398493	+	20.5	1000	Intergenic	Intergenic	31213	NM_145657	219409	Hs.351785	NM_145657	ENSG00000169840	GSX1	GSH1|Gsh-1	GS homeobox 1	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr13-957	chr13	20907477	20908477	+	14.7	1000	Intergenic	LTR32|LTR|ERVL	100008	NR_039721	100616304		NR_039721	ENSG00000263978	MIR4499	-	microRNA 4499	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr13-959	chr13	21635205	21636205	+	15.4	1000	promoter-TSS (NM_014572)	promoter-TSS (NM_014572)	17	NM_014572	26524	Hs.78960	NM_014572	ENSG00000150457	LATS2	KPM	large tumor suppressor kinase 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr13-962	chr13	22424457	22425457	+	14.1	1000	Intergenic	MIRb|SINE|MIR	27342	NR_047040	100874182	Hs.148951	NR_047040	ENSG00000226722	LINC00424	-	long intergenic non-protein coding RNA 424	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr13-963	chr13	22603949	22604949	+	14.1	1000	Intergenic	Intergenic	-152150	NR_047040	100874182	Hs.148951	NR_047040	ENSG00000226722	LINC00424	-	long intergenic non-protein coding RNA 424	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr13-964	chr13	24241417	24242417	+	15.4	1000	"intron (NM_018647, intron 7 of 8)"	L1MB3|LINE|L1	88418	NM_001204458	55504	Hs.149168	NM_018647	ENSG00000127863	TNFRSF19	TAJ|TAJ-alpha|TRADE|TROY	TNF receptor superfamily member 19	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr13-966	chr13	24492986	24493986	+	15.4	1000	"intron (NR_073430, intron 3 of 4)"	L1PA16|LINE|L1	-21845	NR_104426	387911	Hs.740810	NM_001007537	ENSG00000205863	C1QTNF9B	CTRP9B	C1q and tumor necrosis factor related protein 9B	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr13-969	chr13	24576594	24577594	+	14.1	1000	"intron (NM_001286792, intron 2 of 14)"	"intron (NM_001286792, intron 2 of 14)"	23329	NR_104595	221178	Hs.434298	NM_153023	ENSG00000182957	SPATA13	ARHGEF29|ASEF2	spermatogenesis associated 13	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr13-972	chr13	24615712	24616712	+	14.7	1000	"intron (NM_001286792, intron 3 of 14)"	"intron (NM_001286792, intron 3 of 14)"	62447	NR_104595	221178	Hs.434298	NM_153023	ENSG00000182957	SPATA13	ARHGEF29|ASEF2	spermatogenesis associated 13	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr13-973	chr13	24623704	24624704	+	14.7	1000	"intron (NM_001286792, intron 3 of 14)"	AluSg4|SINE|Alu	70439	NR_104595	221178	Hs.434298	NM_153023	ENSG00000182957	SPATA13	ARHGEF29|ASEF2	spermatogenesis associated 13	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr13-979	chr13	25397134	25398134	+	15.4	1000	"intron (NM_031277, intron 15 of 35)"	L1MB4|LINE|L1	59333	NM_031277	56163	Hs.97464	NM_031277	ENSG00000132972	RNF17	Mmip-2|SPATA23|TDRD4	ring finger protein 17	protein-coding	15.36	0	15.82260557	1.26E-14
chr13-982	chr13	25616368	25617368	+	15.4	1000	Intergenic	Intergenic	-53408	NM_030979	5042	Hs.458280	NM_030979	ENSG00000151846	PABPC3	PABP3|PABPL3|tPABP	poly(A) binding protein cytoplasmic 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr13-983	chr13	25669379	25670379	+	15.4	1000	promoter-TSS (NM_030979)	promoter-TSS (NM_030979)	-397	NM_030979	5042	Hs.458280	NM_030979	ENSG00000151846	PABPC3	PABP3|PABPL3|tPABP	poly(A) binding protein cytoplasmic 3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr13-985	chr13	25751673	25752673	+	14.1	1000	"intron (NR_120428, intron 1 of 3)"	"intron (NR_120428, intron 1 of 3)"	1966	NR_120428	101928922	Hs.585620	NR_120428	ENSG00000234056	LINC00463	AMER2-AS1	long intergenic non-protein coding RNA 463	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr13-989	chr13	25791589	25793119	+	25.6	1530	Intergenic	L2b|LINE|L2	36884	NR_120427	102723318	Hs.549877	NR_120427		LINC01053	-	long intergenic non-protein coding RNA 1053	ncRNA	25.6	3.4	7.529411765	9.95E-12
chr13-992	chr13	26002656	26003656	+	15.4	1000	"intron (NM_016529, intron 1 of 36)"	"intron (NM_016529, intron 1 of 36)"	-39756	NM_001313741	51761	Hs.444957	NM_016529	ENSG00000132932	ATP8A2	ATP|ATPIB|CAMRQ4|IB|ML-1	ATPase phospholipid transporting 8A2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr13-993	chr13	26061880	26062880	+	14.7	1000	"intron (NM_016529, intron 2 of 36)"	L1MB2|LINE|L1	19468	NM_001313741	51761	Hs.444957	NM_016529	ENSG00000132932	ATP8A2	ATP|ATPIB|CAMRQ4|IB|ML-1	ATPase phospholipid transporting 8A2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr13-997	chr13	26622510	26626856	+	90.3	4346	"intron (NM_001007538, intron 1 of 1)"	"intron (NM_001007538, intron 1 of 1)"	515	NM_001007538	387914	Hs.433791	NM_001007538	ENSG00000180730	SHISA2	C13orf13|PRO28631|TMEM46|WGAR9166|bA398O19.2|hShisa	shisa family member 2	protein-coding	90.25	14.56	6.198489011	9.40E-32
chr14-1003	chr14	100341442	100342705	+	22.4	1263	"intron (NM_001008707, intron 4 of 22)"	"intron (NM_001008707, intron 4 of 22)"	82328	NM_001008707	2009	Hs.12451	NM_004434	ENSG00000066629	EML1	BH|ELP79|EMAP|EMAPL|HuEMAP	echinoderm microtubule associated protein like 1	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr14-1006	chr14	100431093	100434789	+	64	3696	Intergenic	Intergenic	-4871	NM_001330221	51466	Hs.125867	NM_016337	ENSG00000196405	EVL	RNB6	Enah/Vasp-like	protein-coding	64.01	13.59	4.710080942	2.02E-18
chr14-101	chr14	100354550	100357622	+	70.4	3072	"intron (NM_001008707, intron 5 of 22)"	L2a|LINE|L2	-81726	NM_001330221	51466	Hs.125867	NM_016337	ENSG00000196405	EVL	RNB6	Enah/Vasp-like	protein-coding	70.41	10.68	6.592696629	1.03E-26
chr14-1015	chr14	101238212	101246350	+	124.2	8138	Intergenic	Intergenic	-38547	NR_039729	100616495		NR_039729	ENSG00000266461	MIR2392	-	microRNA 2392	ncRNA	124.18	24.27	5.116604862	6.64E-37
chr14-1039	chr14	102164887	102166165	+	20.5	1278	Intergenic	L1MA3|LINE|L1	-31248	NR_026774	145200	Hs.150840	NR_026774	ENSG00000258512	LINC00239	C14orf72|NCRNA00239	long intergenic non-protein coding RNA 239	ncRNA	20.48	2.43	8.427983539	2.25E-10
chr14-1040	chr14	102223838	102225106	+	22.4	1268	Intergenic	MSTB|LTR|ERVL-MaLR	-3663	NM_001161726	5527	Hs.368264	NM_002719	ENSG00000078304	PPP2R5C	B56G|PR61G	protein phosphatase 2 regulatory subunit B'gamma	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr14-105	chr14	102031690	102033702	+	48	2012	Intergenic	Charlie9|DNA|hAT-Charlie	5008	NM_001362	1735	Hs.49322	NM_001362	ENSG00000197406	DIO3	5DIII|D3|DIOIII|TXDI3	iodothyronine deiodinase 3	protein-coding	48.01	9.71	4.94438723	1.65E-14
chr14-1052	chr14	103722054	103723611	+	28.2	1557	Intergenic	LTR66|LTR|ERVL	-60789	NR_135269	105378183	Hs.132624	NR_135269		LOC105378183	-	uncharacterized LOC105378183	ncRNA	28.16	4.85	5.806185567	1.30E-10
chr14-1053	chr14	103776900	103777900	+	17.9	1000	Intergenic	Intergenic	-6221	NR_135269	105378183	Hs.132624	NR_135269		LOC105378183	-	uncharacterized LOC105378183	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr14-1055	chr14	104650296	104651296	+	19.2	1000	Intergenic	Intergenic	45736	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr14-1062	chr14	104868125	104869860	+	26.9	1735	Intergenic	MSTA-int|LTR|ERVL-MaLR	-177029	NM_001286399	400258	Hs.153827	NM_001008404	ENSG00000184601	C14orf180	C14orf77|NRAC	chromosome 14 open reading frame 180	protein-coding	26.88	6.31	4.259904913	6.42E-08
chr14-1063	chr14	104886330	104891168	+	97.3	4838	Intergenic	Intergenic	-157272	NM_001286399	400258	Hs.153827	NM_001008404	ENSG00000184601	C14orf180	C14orf77|NRAC	chromosome 14 open reading frame 180	protein-coding	97.29	14.08	6.909801136	1.41E-37
chr14-107	chr14	105074940	105077625	+	55	2685	Intergenic	Intergenic	-5185	NM_001286389	388021	Hs.652298	NM_207379	ENSG00000258986	TMEM179	C14orf90|TMEM179A	transmembrane protein 179	protein-coding	55.05	10.68	5.154494382	2.00E-17
chr14-1073	chr14	105054573	105063384	+	163.9	8811	"3' UTR (NM_001286389, exon 4 of 4)"	"3' UTR (NM_001286389, exon 4 of 4)"	11500	NM_001286400	400258	Hs.153827	NM_001008404	ENSG00000184601	C14orf180	C14orf77|NRAC	chromosome 14 open reading frame 180	protein-coding	163.86	30.09	5.445663011	6.41E-51
chr14-1076	chr14	105104847	105105847	+	18.6	1000	Intergenic	Intergenic	26548	NR_135293	101929634	Hs.532502	NR_135293	ENSG00000260792	LOC101929634	-	uncharacterized LOC101929634	ncRNA	18.56	4.37	4.247139588	1.41E-05
chr14-1079	chr14	105322075	105323330	+	20.5	1255	Intergenic	Intergenic	-8948	NM_001112726	283638	Hs.533721	NM_015005	ENSG00000099814	CEP170B	CEP170R|FAM68C|KIAA0284	centrosomal protein 170B	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr14-1086	chr14	105621469	105624636	+	49.9	3167	"intron (NM_145159, intron 3 of 24)"	"intron (NM_145159, intron 3 of 24)"	-5851	NR_106823	102465458		NR_106823	ENSG00000273778	MIR6765	hsa-mir-6765	microRNA 6765	ncRNA	49.93	4.85	10.29484536	4.58E-26
chr14-1092	chr14	106340476	106341476	+	19.2	1000	Intergenic	L1MA2|LINE|L1	-14392	NR_130468	100616374		NR_130468	ENSG00000265612	MIR4539	-	microRNA 4539	ncRNA	19.2	4.37	4.393592677	3.16E-06
chr14-1095	chr14	106397561	106399406	+	37.1	1845	TTS (NR_026800)	TTS (NR_026800)	14645	NR_026800	9834	Hs.649259	NM_014151	ENSG00000226777	FAM30A	C14orf110|HSPC053|KIAA0125	"family with sequence similarity 30, member A"	ncRNA	37.12	5.82	6.378006873	1.70E-14
chr14-1097	chr14	21090813	21091813	+	17.9	1000	Intergenic	CpG	18537	NM_001001968	341799	Hs.513132	NM_001001968	ENSG00000181803	OR6S1	OR14-37|OR6S1Q	olfactory receptor family 6 subfamily S member 1	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr14-1102	chr14	23064759	23068615	+	77.4	3856	promoter-TSS (NM_022060)	promoter-TSS (NM_022060)	-460	NM_022060	63874	Hs.445665	NM_022060	ENSG00000100439	ABHD4	ABH4	abhydrolase domain containing 4	protein-coding	77.45	10.68	7.251872659	6.24E-31
chr14-1111	chr14	23864846	23865846	+	17.9	1000	"intron (NM_002471, intron 20 of 38)"	MIRc|SINE|MIR	-7471	NR_029595	406990		NR_029595	ENSG00000199157	MIR208A	MIR208|MIRN208|MIRN208A|hsa-mir-208a|miRNA208	microRNA 208a	ncRNA	17.92	3.4	5.270588235	8.42E-07
chr14-1119	chr14	54685777	54686777	+	17.9	1000	Intergenic	Intergenic	-177309	NM_001330173	1033	Hs.84113	NM_005192	ENSG00000100526	CDKN3	CDI1|CIP2|KAP|KAP1	cyclin dependent kinase inhibitor 3	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr14-112	chr14	77294479	77296737	+	49.3	2258	"intron (NM_194287, intron 2 of 13)"	"intron (NM_194287, intron 2 of 13)"	2883	NM_194287	145497	Hs.147276	NM_194287	ENSG00000100565	LRRC74A	C14orf166B|LRRC74	leucine rich repeat containing 74A	protein-coding	49.29	8.74	5.639588101	1.25E-16
chr14-1120	chr14	54793720	54795037	+	21.8	1317	Intergenic	Intergenic	-69208	NM_001330173	1033	Hs.84113	NM_005192	ENSG00000100526	CDKN3	CDI1|CIP2|KAP|KAP1	cyclin dependent kinase inhibitor 3	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr14-1121	chr14	55031355	55033995	+	45.4	2640	Intergenic	CpG	-1655	NM_001161576	23034	Hs.98259	NM_015589	ENSG00000020577	SAMD4A	SAMD4|SMAUG|SMAUG1|SMG|SMGA	sterile alpha motif domain containing 4A	protein-coding	45.45	3.4	13.36764706	5.05E-27
chr14-1132	chr14	61653797	61655079	+	18.6	1282	Intergenic	Intergenic	94092	NM_001017970	161291	Hs.146180	NM_001017970	ENSG00000182107	TMEM30B	CDC50B	transmembrane protein 30B	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr14-1133	chr14	61709457	61712040	+	42.9	2583	Intergenic	Intergenic	37782	NM_001017970	161291	Hs.146180	NM_001017970	ENSG00000182107	TMEM30B	CDC50B	transmembrane protein 30B	protein-coding	42.89	7.77	5.51994852	2.23E-14
chr14-1134	chr14	62582513	62585585	+	53.8	3072	promoter-TSS (NR_015358)	promoter-TSS (NR_015358)	-26	NR_015358	646113	Hs.445241	NM_001039785		LINC00643	-	long intergenic non-protein coding RNA 643	ncRNA	53.77	8.74	6.152173913	9.88E-20
chr14-1136	chr14	65244594	65245594	+	17.9	1000	"intron (NM_000347, intron 21 of 30)"	"intron (NM_000347, intron 21 of 30)"	7310	NR_107009	102465841		NR_107009	ENSG00000070182	MIR7855	hsa-mir-7855	microRNA 7855	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr14-1138	chr14	73202942	73204240	+	21.1	1298	"intron (NM_012074, intron 3 of 9)"	"intron (NM_012074, intron 3 of 9)"	155766	NM_001280544	8110	Hs.162868	NM_012074	ENSG00000205683	DPF3	BAF45C|CERD4	double PHD fingers 3	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr14-1140	chr14	75051169	75052169	+	17.9	1000	"intron (NM_000428, intron 3 of 35)"	"intron (NM_000428, intron 3 of 35)"	27365	NM_000428	4053	Hs.512776	NM_000428	ENSG00000119681	LTBP2	C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3	latent transforming growth factor beta binding protein 2	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr14-1141	chr14	75706733	75708055	+	18.6	1322	Intergenic	Intergenic	-38087	NM_005252	2353	Hs.25647	NM_005252	ENSG00000170345	FOS	AP-1|C-FOS|p55	"Fos proto-oncogene, AP-1 transcription factor subunit"	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr14-1150	chr14	77285937	77286937	+	18.6	1000	Intergenic	L1MC4|LINE|L1	-6288	NM_194287	145497	Hs.147276	NM_194287	ENSG00000100565	LRRC74A	C14orf166B|LRRC74	leucine rich repeat containing 74A	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr14-1151	chr14	77604184	77610690	+	108.8	6506	"intron (NM_174976, intron 1 of 2)"	CpG	697	NM_174976	283576	Hs.525485	NM_174976	ENSG00000177108	ZDHHC22	C14orf59	zinc finger DHHC-type containing 22	protein-coding	108.81	18.44	5.900759219	7.14E-37
chr14-116	chr14	101902229	101903229	+	25	1000	Intergenic	Intergenic	-5684	NR_135240	100507277	Hs.123543	NR_135240	ENSG00000259082	LOC100507277	-	uncharacterized LOC100507277	ncRNA	24.96	5.82	4.288659794	3.56E-07
chr14-1161	chr14	92978741	92981626	+	49.9	2885	promoter-TSS (NM_024832)	promoter-TSS (NM_024832)	58	NM_024832	79890	Hs.326822	NM_024832	ENSG00000100599	RIN3	-	Ras and Rab interactor 3	protein-coding	49.93	7.28	6.858516484	5.35E-20
chr14-1165	chr14	94864105	94865380	+	22.4	1275	Intergenic	LTR8|LTR|ERV1	-7713	NM_001127706	5265	Hs.525557	NM_000295	ENSG00000197249	SERPINA1	A1A|A1AT|AAT|PI|PI1|PRO2275|alpha1AT	serpin family A member 1	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr14-1166	chr14	95176527	95177804	+	22.4	1277	Intergenic	Intergenic	59334	NM_173849	145258	Hs.440438	NM_173849	ENSG00000133937	GSC	SAMS	goosecoid homeobox	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr14-1167	chr14	96063823	96065074	+	19.8	1251	Intergenic	Intergenic	-53067	NR_028288	27004	Hs.510368	NM_012468	ENSG00000187621	TCL6	TNG1|TNG2	T-cell leukemia/lymphoma 6 (non-protein coding)	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr14-1170	chr14	99752576	99753576	+	18.6	1000	Intergenic	Intergenic	-15026	NM_001282237	64919	Hs.709690	NM_022898	ENSG00000127152	BCL11B	ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IMD49|RIT1|ZNF856B|hRIT1-alpha	B-cell CLL/lymphoma 11B	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr14-1180	chr14	100278501	100280653	+	35.2	2152	"intron (NM_001008707, intron 1 of 22)"	"intron (NM_001008707, intron 1 of 22)"	19832	NM_001008707	2009	Hs.12451	NM_004434	ENSG00000066629	EML1	BH|ELP79|EMAP|EMAPL|HuEMAP	echinoderm microtubule associated protein like 1	protein-coding	35.2	3.88	9.072164948	5.09E-17
chr14-1188	chr14	100398141	100399141	+	19.8	1000	"intron (NM_001008707, intron 18 of 22)"	L3b|LINE|CR1	-39171	NM_001330221	51466	Hs.125867	NM_016337	ENSG00000196405	EVL	RNB6	Enah/Vasp-like	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr14-1191	chr14	100630082	100631765	+	27.5	1683	Intergenic	AluSq|SINE|Alu	-4911	NM_206918	123099	Hs.159643	NM_206918	ENSG00000168350	DEGS2	C14orf66|DES2|FADS8	"delta 4-desaturase, sphingolipid 2"	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr14-1201	chr14	101126690	101127690	+	18.6	1000	"intron (NR_024096, intron 1 of 1)"	MIR|SINE|MIR	3585	NR_024096	283601	Hs.379802	NM_001007560	ENSG00000196273	LINC00523	C14orf70	long intergenic non-protein coding RNA 523	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr14-122	chr14	36979460	36980715	+	28.8	1255	"intron (NR_138596, intron 1 of 4)"	"intron (NR_138596, intron 1 of 4)"	2903	NR_138598	253970	Hs.509165	NM_001101341	ENSG00000229415	SFTA3	NANCI|SFTPH|SP-H	surfactant associated 3	protein-coding	28.8	3.88	7.422680412	1.97E-12
chr14-1225	chr14	101699886	101704556	+	69.1	4670	Intergenic	Intergenic	165973	NR_047664	100507257	Hs.301755	NR_047664	ENSG00000223403	MEG9	LINC00584	maternally expressed 9 (non-protein coding)	ncRNA	69.13	9.71	7.11946447	8.31E-28
chr14-1228	chr14	101745044	101746618	+	22.4	1574	Intergenic	L1ME1|LINE|L1	128428	NR_126006	338002	Hs.124848	NR_126006	ENSG00000259023	LINC00524	C14orf71	long intergenic non-protein coding RNA 524	ncRNA	22.4	4.37	5.125858124	1.32E-07
chr14-1233	chr14	101940336	101941336	+	18.6	1000	Intergenic	L2b|LINE|L2	32423	NR_135240	100507277	Hs.123543	NR_135240	ENSG00000259082	LOC100507277	-	uncharacterized LOC100507277	ncRNA	18.56	4.37	4.247139588	1.41E-05
chr14-1235	chr14	101977281	101979821	+	39.7	2540	Intergenic	Intergenic	43462	NR_002770	64150	Hs.525597	NR_002770		DIO3OS	C14orf134|DIO3-AS1|DIO3-OS|NCRNA00041	DIO3 opposite strand/antisense RNA (head to head)	ncRNA	39.69	5.34	7.43258427	3.64E-17
chr14-1239	chr14	102172128	102173128	+	23.7	1000	Intergenic	CpG	-24146	NR_026774	145200	Hs.150840	NR_026774	ENSG00000258512	LINC00239	C14orf72|NCRNA00239	long intergenic non-protein coding RNA 239	ncRNA	23.68	4.85	4.882474227	1.15E-07
chr14-1262	chr14	104773641	104776515	+	48.6	2874	Intergenic	Intergenic	170018	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	48.65	7.28	6.682692308	3.68E-19
chr14-1263	chr14	104782833	104788776	+	102.4	5943	Intergenic	Intergenic	180744	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	102.41	25.24	4.057448494	1.95E-24
chr14-1269	chr14	104898367	104901849	+	74.2	3482	Intergenic	Intergenic	-145913	NM_001286399	400258	Hs.153827	NM_001008404	ENSG00000184601	C14orf180	C14orf77|NRAC	chromosome 14 open reading frame 180	protein-coding	74.25	15.53	4.781068899	2.13E-21
chr14-1270	chr14	104935858	104936858	+	17.9	1000	Intergenic	Intergenic	-109663	NM_001286399	400258	Hs.153827	NM_001008404	ENSG00000184601	C14orf180	C14orf77|NRAC	chromosome 14 open reading frame 180	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr14-1281	chr14	105311734	105312734	+	17.9	1000	Intergenic	MLT1A0|LTR|ERVL-MaLR	-19416	NM_001112726	283638	Hs.533721	NM_015005	ENSG00000099814	CEP170B	CEP170R|FAM68C|KIAA0284	centrosomal protein 170B	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr14-1296	chr14	106071231	106072231	+	17.9	1000	Intergenic	Intergenic	-15722	NR_107059	102466889		NR_107059	ENSG00000277030	MIR8071-2	hsa-mir-8071-2	microRNA 8071-2	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr14-1299	chr14	106236372	106237372	+	17.3	1000	Intergenic	Intergenic	87472	NR_039730	100616135		NR_039730	ENSG00000264024	MIR4507	-	microRNA 4507	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr14-1304	chr14	106329446	106332122	+	56.3	2676	Intergenic	Intergenic	-4200	NR_130468	100616374		NR_130468	ENSG00000265612	MIR4539	-	microRNA 4539	ncRNA	56.33	8.74	6.445080092	2.41E-21
chr14-1310	chr14	106624795	106625795	+	17.3	1000	Intergenic	Intergenic	-118974	NR_033375	338004	Hs.569411	NR_033375		LINC00226	C14orf97|NCRNA00226	long intergenic non-protein coding RNA 226	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr14-1311	chr14	21093697	21094697	+	16.6	1000	Intergenic	AluSc|SINE|Alu	15653	NM_001001968	341799	Hs.513132	NM_001001968	ENSG00000181803	OR6S1	OR14-37|OR6S1Q	olfactory receptor family 6 subfamily S member 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr14-1312	chr14	21546437	21547804	+	21.8	1367	"exon (NM_001278529, exon 11 of 24)"	"exon (NM_001278529, exon 11 of 24)"	-8089	NM_001282211	57447	Hs.525205	NM_016250	ENSG00000165795	NDRG2	SYLD	NDRG family member 2	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr14-1313	chr14	21784977	21785977	+	16.6	1000	"intron (NM_020366, intron 9 of 23)"	"intron (NM_020366, intron 9 of 23)"	29341	NM_020366	57096	Hs.126035	NM_020366	ENSG00000092200	RPGRIP1	CORD13|LCA6|RGI1|RGRIP|RPGRIP|RPGRIP1d	retinitis pigmentosa GTPase regulator interacting protein 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr14-1318	chr14	23073278	23074278	+	17.3	1000	"intron (NM_022060, intron 4 of 6)"	AluSz|SINE|Alu	6631	NM_022060	63874	Hs.445665	NM_022060	ENSG00000100439	ABHD4	ABH4	abhydrolase domain containing 4	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr14-1319	chr14	23325994	23326994	+	16	1000	Intergenic	MLT1F|LTR|ERVL-MaLR	-14432	NM_014045	26020	Hs.525232	NM_014045	ENSG00000197324	LRP10	LRP-10|LRP9|MST087|MSTP087	LDL receptor related protein 10	protein-coding	16	2.43	6.58436214	7.90E-07
chr14-1324	chr14	23879562	23883669	+	61.4	4107	TTS (NM_000257)	TTS (NM_000257)	-3044	NR_126491	104564225		NR_126491		MHRT	Myheart	myosin heavy chain-associated RNA transcript	ncRNA	61.45	12.62	4.869255151	2.65E-18
chr14-1326	chr14	23885455	23886741	+	20.5	1286	"exon (NM_000257, exon 33 of 40)"	"exon (NM_000257, exon 33 of 40)"	1174	NR_030624	100126336		NR_030624	ENSG00000215991	MIR208B	MIRN208B|mir-208b	microRNA 208b	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr14-1327	chr14	25282649	25283649	+	17.3	1000	"intron (NM_001304477, intron 5 of 5)"	"intron (NM_001304477, intron 5 of 5)"	-179674	NR_144343	3002	Hs.1051	NM_004131	ENSG00000100453	GZMB	C11|CCPI|CGL-1|CGL1|CSP-B|CSPB|CTLA1|CTSGL1|HLP|SECT	granzyme B	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr14-1329	chr14	33594643	33595643	+	16.6	1000	"intron (NM_001164749, intron 2 of 11)"	"intron (NM_001164749, intron 2 of 11)"	186684	NM_173159	64067	Hs.657892	NM_022123	ENSG00000151322	NPAS3	MOP6|PASD6|bHLHe12	neuronal PAS domain protein 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr14-1337	chr14	53416612	53417612	+	17.3	1000	"intron (NM_001134999, intron 2 of 15)"	CpG	703	NM_001134999	10979	Hs.509343	NM_006832	ENSG00000073712	FERMT2	KIND2|MIG2|PLEKHC1|UNC112|UNC112B|mig-2	fermitin family member 2	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr14-1347	chr14	61683268	61686384	+	50.6	3116	Intergenic	Intergenic	63704	NM_001017970	161291	Hs.146180	NM_001017970	ENSG00000182107	TMEM30B	CDC50B	transmembrane protein 30B	protein-coding	50.57	11.16	4.531362007	4.90E-14
chr14-1353	chr14	65280597	65282690	+	39.7	2093	"intron (NM_000347, intron 1 of 30)"	"intron (NM_000347, intron 1 of 30)"	8223	NM_000347	6710	Hs.417303	NM_000347	ENSG00000070182	SPTB	EL3|HS2|HSPTB1|SPH2	"spectrin beta, erythrocytic"	protein-coding	39.69	6.8	5.836764706	2.14E-14
chr14-1357	chr14	66265389	66266389	+	17.3	1000	Intergenic	Intergenic	328069	NR_030355	693210		NR_030355	ENSG00000207781	MIR625	MIRN625|hsa-mir-625	microRNA 625	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr14-1358	chr14	66704063	66705063	+	16.6	1000	Intergenic	Intergenic	-248526	NR_110308	440184	Hs.412138	NM_001004331	ENSG00000196553	LINC00238	C14orf53|NCRNA00238	long intergenic non-protein coding RNA 238	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr14-1362	chr14	70192092	70193456	+	22.4	1364	Intergenic	Intergenic	-41030	NM_006925	6430	Hs.632326	NM_006925	ENSG00000100650	SRSF5	HRS|SFRS5|SRP40	serine and arginine rich splicing factor 5	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr14-1368	chr14	72266599	72267599	+	17.3	1000	Intergenic	AluSx3|SINE|Alu	-131718	NM_001204423	9628	Hs.509872	NM_004296	ENSG00000182732	RGS6	GAP|HA117|S914	regulator of G-protein signaling 6	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr14-1371	chr14	73064855	73066221	+	23	1366	Intergenic	Intergenic	82010	NR_106994	102465832		NR_106994	ENSG00000273830	MIR7843	hsa-mir-7843	microRNA 7843	ncRNA	23.04	3.88	5.93814433	4.22E-09
chr14-1372	chr14	73147223	73148474	+	19.2	1251	"intron (NM_012074, intron 7 of 9)"	L2a|LINE|L2	164320	NR_106994	102465832		NR_106994	ENSG00000273830	MIR7843	hsa-mir-7843	microRNA 7843	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr14-1373	chr14	73152672	73153996	+	19.2	1324	"intron (NM_012074, intron 7 of 9)"	"intron (NM_012074, intron 7 of 9)"	169806	NR_106994	102465832		NR_106994	ENSG00000273830	MIR7843	hsa-mir-7843	microRNA 7843	ncRNA	19.2	4.37	4.393592677	3.16E-06
chr14-1376	chr14	74706978	74710705	+	52.5	3727	"intron (NM_182894, intron 2 of 4)"	"intron (NM_182894, intron 2 of 4)"	2666	NM_182894	338917	Hs.449771	NM_182894	ENSG00000119614	VSX2	CHX10|HOX10|MCOP2|MCOPCB3|RET1	visual system homeobox 2	protein-coding	52.49	8.74	6.005720824	6.11E-19
chr14-1378	chr14	74903701	74904701	+	17.9	1000	Intergenic	Intergenic	-11396	NM_001105579	646658	Hs.12400	NM_001105579	ENSG00000183379	SYNDIG1L	CAPUCIN|DSPC1|IFITMD4|TMEM90A	synapse differentiation inducing 1 like	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr14-1379	chr14	74996073	74997073	+	16.6	1000	"intron (NM_000428, intron 10 of 35)"	"intron (NM_000428, intron 10 of 35)"	36150	NM_194279	122961	Hs.291079	NM_194279	ENSG00000165898	ISCA2	HBLD1|ISA2|MMDS4|c14_5557	iron-sulfur cluster assembly 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr14-1380	chr14	75720654	75721654	+	17.3	1000	Intergenic	Intergenic	-24327	NM_005252	2353	Hs.25647	NM_005252	ENSG00000170345	FOS	AP-1|C-FOS|p55	"Fos proto-oncogene, AP-1 transcription factor subunit"	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr14-1381	chr14	75726976	75729243	+	35.2	2267	Intergenic	(TTCC)n|Simple_repeat|Simple_repeat	-17372	NM_005252	2353	Hs.25647	NM_005252	ENSG00000170345	FOS	AP-1|C-FOS|p55	"Fos proto-oncogene, AP-1 transcription factor subunit"	protein-coding	35.2	7.28	4.835164835	9.40E-11
chr14-1391	chr14	78477935	78478935	+	16.6	1000	Intergenic	Intergenic	-158281	NM_001330195	9369	Hs.368307	NM_004796	ENSG00000021645	NRXN3	C14orf60	neurexin 3	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr14-1392	chr14	81916235	81917235	+	17.9	1000	promoter-TSS (NR_109999)	promoter-TSS (NR_109999)	-234	NR_109999	100506700	Hs.116304	NR_109999	ENSG00000258675	LOC100506700	-	uncharacterized LOC100506700	ncRNA	17.92	0.97	18.4742268	1.12E-13
chr14-1395	chr14	91046491	91047923	+	21.8	1432	"intron (NM_001320421, intron 19 of 20)"	"intron (NM_001320421, intron 19 of 20)"	-61766	NR_110134	101928909	Hs.662545	NR_110134	ENSG00000259163	LOC101928909	-	uncharacterized LOC101928909	ncRNA	21.76	4.85	4.486597938	5.54E-07
chr14-1398	chr14	92301435	92303820	+	43.5	2385	"5' UTR (NM_152332, exon 1 of 12)"	"5' UTR (NM_152332, exon 1 of 12)"	243	NM_001128595	123036	Hs.510262	NM_152332	ENSG00000165929	TC2N	C14orf47|C2CD1|MTAC2D1|Tac2-N	"tandem C2 domains, nuclear"	protein-coding	43.53	5.82	7.479381443	9.68E-19
chr14-1400	chr14	92833306	92834306	+	16.6	1000	"intron (NM_153646, intron 2 of 16)"	"intron (NM_153646, intron 2 of 16)"	43654	NM_153646	123041	Hs.385530	NM_153646	ENSG00000140090	SLC24A4	AI2A5|NCKX4|SHEP6|SLC24A2	solute carrier family 24 member 4	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr14-1405	chr14	94171451	94172942	+	20.5	1491	"intron (NM_001346218, intron 50 of 50)"	"intron (NM_001346218, intron 50 of 50)"	82570	NM_178013	145270	Hs.432401	NM_178004	ENSG00000175785	PRIMA1	PRIMA	proline rich membrane anchor 1	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr14-1408	chr14	94447187	94448456	+	19.2	1269	Intergenic	Intergenic	-4745	NM_001202429	51676	Hs.510327	NM_016150	ENSG00000100628	ASB2	ASB-2	ankyrin repeat and SOCS box containing 2	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr14-1409	chr14	94844122	94845122	+	16.6	1000	"3' UTR (NM_000295, exon 5 of 5)"	"3' UTR (NM_000295, exon 5 of 5)"	10531	NM_000295	5265	Hs.525557	NM_000295	ENSG00000197249	SERPINA1	A1A|A1AT|AAT|PI|PI1|PRO2275|alpha1AT	serpin family A member 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr14-1410	chr14	95474732	95475732	+	17.9	1000	Intergenic	Intergenic	124608	NM_001195573	23405	Hs.87889	NM_030621	ENSG00000100697	DICER1	DCR1|Dicer|Dicer1e|HERNA|K12H4.8-LIKE|MNG1|RMSE2	"dicer 1, ribonuclease III"	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr14-1425	chr14	100098205	100101293	+	37.8	3088	"intron (NM_001329411, intron 2 of 8)"	"intron (NM_001329411, intron 2 of 8)"	-11698	NM_032425	84439	Hs.131714	NM_032425	ENSG00000182218	HHIPL1	KIAA1822|UNQ9245	HHIP like 1	protein-coding	37.76	5.82	6.487972509	1.70E-14
chr14-1426	chr14	100109380	100110639	+	17.9	1259	"intron (NM_001329411, intron 2 of 8)"	LTR33A_|LTR|ERVL	-1438	NM_032425	84439	Hs.131714	NM_032425	ENSG00000182218	HHIPL1	KIAA1822|UNQ9245	HHIP like 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr14-1437	chr14	100296191	100297777	+	32.6	1586	"intron (NM_001008707, intron 1 of 22)"	AluSq2|SINE|Alu	37239	NM_001008707	2009	Hs.12451	NM_004434	ENSG00000066629	EML1	BH|ELP79|EMAP|EMAPL|HuEMAP	echinoderm microtubule associated protein like 1	protein-coding	32.64	5.82	5.608247423	2.32E-11
chr14-1451	chr14	100422085	100423356	+	26.2	1271	Intergenic	Intergenic	-15092	NM_001330221	51466	Hs.125867	NM_016337	ENSG00000196405	EVL	RNB6	Enah/Vasp-like	protein-coding	26.24	6.31	4.158478605	2.77E-07
chr14-1454	chr14	101017605	101025584	+	121	7979	"intron (NM_020836, intron 2 of 6)"	"intron (NM_020836, intron 2 of 6)"	12813	NM_001159531	57596	Hs.211751	NM_020836	ENSG00000183092	BEGAIN	-	brain enriched guanylate kinase associated	protein-coding	120.98	29.61	4.08578183	1.86E-28
chr14-1474	chr14	101362740	101369446	+	130.6	6706	"intron (NR_024149, intron 2 of 3)"	MIRb|SINE|MIR	4986	NR_024149	79104	Hs.655789	NR_024149	ENSG00000225746	MEG8	Bsr|Irm|LINC00024|NCRNA00024|Rian	maternally expressed 8 (non-protein coding)	ncRNA	130.58	28.15	4.638721137	3.02E-35
chr14-1478	chr14	101621706	101622706	+	16.6	1000	Intergenic	L1MEf|LINE|L1	85958	NR_047664	100507257	Hs.301755	NR_047664	ENSG00000223403	MEG9	LINC00584	maternally expressed 9 (non-protein coding)	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr14-1483	chr14	101801171	101802171	+	16.6	1000	Intergenic	Intergenic	72588	NR_126006	338002	Hs.124848	NR_126006	ENSG00000259023	LINC00524	C14orf71	long intergenic non-protein coding RNA 524	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr14-1492	chr14	101991642	101992911	+	20.5	1269	Intergenic	Intergenic	29737	NR_002770	64150	Hs.525597	NR_002770		DIO3OS	C14orf134|DIO3-AS1|DIO3-OS|NCRNA00041	DIO3 opposite strand/antisense RNA (head to head)	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr14-1518	chr14	103675549	103676549	+	17.3	1000	Intergenic	Intergenic	-20684	NR_033938	100131366	Hs.147881	NR_033938	ENSG00000251533	LINC00605	-	long intergenic non-protein coding RNA 605	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr14-1528	chr14	104613405	104614405	+	17.9	1000	"intron (NM_015656, intron 2 of 14)"	"intron (NM_015656, intron 2 of 14)"	8845	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	17.92	0	18.4597065	9.96E-18
chr14-1532	chr14	104742487	104748653	+	92.2	6166	Intergenic	Intergenic	140510	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	92.17	21.36	4.315074906	1.21E-23
chr14-1536	chr14	104848282	104849282	+	16	1000	Intergenic	Intergenic	-197239	NM_001286399	400258	Hs.153827	NM_001008404	ENSG00000184601	C14orf180	C14orf77|NRAC	chromosome 14 open reading frame 180	protein-coding	16	3.88	4.12371134	7.91E-05
chr14-1553	chr14	105289144	105290144	+	17.9	1000	"non-coding (NR_024396, exon 1 of 1)"	"non-coding (NR_024396, exon 1 of 1)"	2106	NR_024396	196872	Hs.352220	NR_024396	ENSG00000258701	LINC00638	-	long intergenic non-protein coding RNA 638	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr14-1554	chr14	105293449	105294449	+	17.3	1000	Intergenic	Intergenic	6411	NR_024396	196872	Hs.352220	NR_024396	ENSG00000258701	LINC00638	-	long intergenic non-protein coding RNA 638	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr14-156	chr14	102153145	102154145	+	24.3	1000	Intergenic	L1MC4|LINE|L1	-43129	NR_026774	145200	Hs.150840	NR_026774	ENSG00000258512	LINC00239	C14orf72|NCRNA00239	long intergenic non-protein coding RNA 239	ncRNA	24.32	4.85	5.01443299	2.27E-08
chr14-1570	chr14	105505151	105508825	+	62.1	3674	Intergenic	MER4E1|LTR|ERV1	-19563	NM_017955	55038	Hs.34045	NM_017955	ENSG00000170779	CDCA4	HEPP|SEI-3/HEPP	cell division cycle associated 4	protein-coding	62.09	11.65	5.329613734	1.19E-19
chr14-1571	chr14	105559326	105564560	+	101.8	5234	"non-coding (NR_110546, exon 3 of 6)"	"non-coding (NR_110546, exon 3 of 6)"	1459	NR_110546	102723354	Hs.569410	NR_110546		LOC102723354	-	uncharacterized LOC102723354	ncRNA	101.77	20.87	4.876377575	6.87E-29
chr14-1578	chr14	105941342	105946516	+	87.1	5174	"non-coding (NR_073085, exon 1 of 8)"	"non-coding (NR_073085, exon 1 of 8)"	346	NR_073085	1397	Hs.534309	NM_001312	ENSG00000182809	CRIP2	CRIP|CRP2|ESP1	cysteine rich protein 2	protein-coding	87.05	19.9	4.374371859	9.85E-23
chr14-1596	chr14	106391582	106392582	+	17.3	1000	"non-coding (NR_026800, exon 6 of 6)"	"non-coding (NR_026800, exon 6 of 6)"	8244	NR_026800	9834	Hs.649259	NM_014151	ENSG00000226777	FAM30A	C14orf110|HSPC053|KIAA0125	"family with sequence similarity 30, member A"	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr14-1598	chr14	20994383	20995654	+	20.5	1271	Intergenic	HAL1b|LINE|L1	16387	NM_001012975	338879	Hs.451057	NM_001012975	ENSG00000182545	RNASE10	RAH1|RNASE9	ribonuclease A family member 10 (inactive)	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr14-1600	chr14	21360449	21361449	+	16.6	1000	TTS (NM_002935)	TTS (NM_002935)	1387	NM_002935	6037	Hs.73839	NM_002935	ENSG00000169397	RNASE3	ECP|RAF1|RNS3	ribonuclease A family member 3	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr14-1601	chr14	21363235	21364235	+	17.3	1000	Intergenic	LTR72|LTR|ERV1	4173	NM_002935	6037	Hs.73839	NM_002935	ENSG00000169397	RNASE3	ECP|RAF1|RNS3	ribonuclease A family member 3	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr14-1602	chr14	21439108	21440448	+	20.5	1340	Intergenic	CpG	16148	NM_002934	6036	Hs.728	NM_002934	ENSG00000169385	RNASE2	EDN|RAF3|RNS2	ribonuclease A family member 2	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr14-1604	chr14	21541295	21542295	+	16	1000	"intron (NM_018071, intron 2 of 23)"	"intron (NM_018071, intron 2 of 23)"	-2764	NM_001282211	57447	Hs.525205	NM_016250	ENSG00000165795	NDRG2	SYLD	NDRG family member 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr14-1606	chr14	22007162	22008162	+	17.3	1000	Intergenic	GA-rich|Low_complexity|Low_complexity	-2312	NR_111966	6297	Hs.416358	NM_005407	ENSG00000165821	SALL2	COLB|HSAL2|Sal-2|ZNF795|p150(Sal2)	spalt like transcription factor 2	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr14-1613	chr14	23629459	23630459	+	15.4	1000	"intron (NM_012244, intron 3 of 10)"	"intron (NM_012244, intron 3 of 10)"	-5292	NM_001267036	23428	Hs.596643	NM_012244	ENSG00000092068	SLC7A8	LAT2|LPI-PC1	solute carrier family 7 member 8	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr14-1617	chr14	24042197	24043197	+	17.9	1000	"intron (NM_032452, intron 4 of 6)"	"intron (NM_032452, intron 4 of 6)"	5312	NM_001146028	84502	Hs.597841	NM_032452	ENSG00000092051	JPH4	JP4|JPHL1	junctophilin 4	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr14-1621	chr14	24855346	24858596	+	43.5	3250	Intergenic	AluSx|SINE|Alu	-11021	NM_025081	57523	Hs.288348	NM_025081	ENSG00000205978	NYNRIN	CGIN1|KIAA1305	NYN domain and retroviral integrase containing	protein-coding	43.53	10.19	4.271835132	6.58E-12
chr14-1623	chr14	26654013	26655495	+	23.7	1482	Intergenic	MLT1A1|LTR|ERVL-MaLR	412206	NM_006491	4857	Hs.31588	NM_002515	ENSG00000139910	NOVA1	Nova-1	NOVA alternative splicing regulator 1	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr14-1625	chr14	34147369	34149938	+	35.2	2569	"intron (NM_001164749, intron 6 of 11)"	"intron (NM_001164749, intron 6 of 11)"	-29490	NR_132771	106635522		NR_132771		SNORA89	-	"small nucleolar RNA, H/ACA box 89"	snoRNA	35.2	5.82	6.048109966	6.75E-13
chr14-1626	chr14	34173996	34174996	+	16.6	1000	"intron (NM_001164749, intron 6 of 11)"	"intron (NM_001164749, intron 6 of 11)"	-3647	NR_132771	106635522		NR_132771		SNORA89	-	"small nucleolar RNA, H/ACA box 89"	snoRNA	16.64	2.91	5.718213058	8.60E-07
chr14-1628	chr14	34575513	34577934	+	35.8	2421	Intergenic	L1ME3F|LINE|L1	-156439	NM_022073	112399	Hs.135507	NM_022073	ENSG00000129521	EGLN3	HIFP4H3|HIFPH3|PHD3	egl-9 family hypoxia inducible factor 3	protein-coding	35.84	5.82	6.158075601	1.09E-13
chr14-1629	chr14	37054898	37055898	+	17.3	1000	Intergenic	Intergenic	-3579	NM_014360	26257	Hs.234763	NM_014360	ENSG00000136327	NKX2-8	NKX2.8|NKX2H|Nkx2-9	NK2 homeobox 8	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr14-1631	chr14	37326921	37328199	+	19.2	1278	"intron (NM_030631, intron 2 of 9)"	"intron (NM_030631, intron 2 of 9)"	94036	NR_039725	100616280		NR_039725	ENSG00000266327	MIR4503	-	microRNA 4503	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr14-1632	chr14	49506338	49507338	+	17.9	1000	Intergenic	MLT1L|LTR|ERVL-MaLR	546296	NM_001032	6235	Hs.156367	NM_001032	ENSG00000213741	RPS29	DBA13|S29	ribosomal protein S29	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr14-1640	chr14	56472384	56475113	+	31.4	2729	Intergenic	L1PA3|LINE|L1	-111345	NM_021255	57161	Hs.657926	NM_021255	ENSG00000139946	PELI2	-	pellino E3 ubiquitin protein ligase family member 2	protein-coding	31.36	4.85	6.465979381	3.34E-12
chr14-1641	chr14	56476695	56477695	+	16	1000	Intergenic	HSMAR2|DNA|TcMar-Mariner	-107898	NM_021255	57161	Hs.657926	NM_021255	ENSG00000139946	PELI2	-	pellino E3 ubiquitin protein ligase family member 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr14-1645	chr14	58617485	58619059	+	23	1574	"intron (NM_001001872, intron 1 of 7)"	"intron (NM_001001872, intron 1 of 7)"	685	NM_001001872	145407	Hs.26766	NM_001001872	ENSG00000139971	C14orf37	UT2|c14_5376	chromosome 14 open reading frame 37	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr14-1648	chr14	60338045	60339045	+	16.6	1000	promoter-TSS (NM_021136)	promoter-TSS (NM_021136)	-988	NM_021136	6252	Hs.368626	NM_021136	ENSG00000139970	RTN1	NSP	reticulon 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr14-1649	chr14	61114534	61124286	+	154.3	9752	Intergenic	Intergenic	-3255	NM_005982	6495	Hs.633506	NM_005982	ENSG00000126778	SIX1	BOS3|DFNA23|TIP39	SIX homeobox 1	protein-coding	154.26	26.21	5.88553987	5.11E-51
chr14-1658	chr14	65332981	65336111	+	49.3	3130	Intergenic	AluSx1|SINE|Alu	-44680	NM_001024858	6710	Hs.417303	NM_000347	ENSG00000070182	SPTB	EL3|HS2|HSPTB1|SPH2	"spectrin beta, erythrocytic"	protein-coding	49.29	9.22	5.345986985	6.74E-16
chr14-1660	chr14	65338702	65340033	+	20.5	1331	Intergenic	Intergenic	-41712	NM_001204064	91612	Hs.731537	NM_145165	ENSG00000258289	CHURC1	C14orf52|My015|chch	churchill domain containing 1	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr14-1664	chr14	69449242	69450242	+	16	1000	"intron (NR_073422, intron 2 of 3)"	L2c|LINE|L2	3343	NR_073422	161159	Hs.603341	NR_073422	ENSG00000259062	ACTN1-AS1	C14orf84	ACTN1 antisense RNA 1	ncRNA	16	2.91	5.498281787	4.98E-06
chr14-1668	chr14	70288204	70289204	+	16	1000	Intergenic	MLT2A1|LTR|ERVL	-24698	NM_003049	6554	Hs.952	NM_003049	ENSG00000100652	SLC10A1	NTCP	solute carrier family 10 member 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr14-1670	chr14	70393893	70396762	+	41.6	2869	"intron (NM_001034852, intron 1 of 11)"	"intron (NM_001034852, intron 1 of 11)"	49213	NM_022137	64093	Hs.497349	NM_022137	ENSG00000198732	SMOC1	OAS	SPARC related modular calcium binding 1	protein-coding	41.61	5.82	7.149484536	5.30E-17
chr14-1671	chr14	70557150	70558150	+	16	1000	"intron (NM_033262, intron 2 of 7)"	Charlie4z|DNA|hAT-Charlie	-10716	NM_001130417	6547	Hs.337696	NM_033262	ENSG00000100678	SLC8A3	NCX3	solute carrier family 8 member A3	protein-coding	16	3.4	4.705882353	2.25E-05
chr14-1683	chr14	74713208	74714208	+	16.6	1000	"intron (NM_182894, intron 3 of 4)"	"intron (NM_182894, intron 3 of 4)"	7533	NM_182894	338917	Hs.449771	NM_182894	ENSG00000119614	VSX2	CHX10|HOX10|MCOP2|MCOPCB3|RET1	visual system homeobox 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr14-1684	chr14	74854850	74857270	+	38.4	2420	Intergenic	AluJo|SINE|Alu	36745	NM_001105579	646658	Hs.12400	NM_001105579	ENSG00000183379	SYNDIG1L	CAPUCIN|DSPC1|IFITMD4|TMEM90A	synapse differentiation inducing 1 like	protein-coding	38.4	5.34	7.191011236	2.72E-16
chr14-1687	chr14	75058495	75060632	+	39.7	2137	"intron (NM_000428, intron 2 of 35)"	"intron (NM_000428, intron 2 of 35)"	19471	NM_000428	4053	Hs.512776	NM_000428	ENSG00000119681	LTBP2	C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3	latent transforming growth factor beta binding protein 2	protein-coding	39.69	9.22	4.304772234	4.47E-11
chr14-1688	chr14	75072314	75073314	+	16	1000	"intron (NM_000428, intron 1 of 35)"	"intron (NM_000428, intron 1 of 35)"	6220	NM_000428	4053	Hs.512776	NM_000428	ENSG00000119681	LTBP2	C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3	latent transforming growth factor beta binding protein 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr14-1694	chr14	76096225	76097225	+	16.6	1000	"intron (NM_001195283, intron 3 of 9)"	"intron (NM_001195283, intron 3 of 9)"	24920	NM_001195283	55640	Hs.509966	NM_017791	ENSG00000119686	FLVCR2	C14orf58|CCT|EPV|FLVCRL14q|MFSD7C|PVHH	feline leukemia virus subgroup C cellular receptor family member 2	protein-coding	16.64	0.49	33.95918367	3.68E-16
chr14-1695	chr14	76589820	76591340	+	25.6	1520	Intergenic	Intergenic	-27648	NM_001322028	55668	Hs.410231	NM_017926	ENSG00000089916	GPATCH2L	C14orf118	G-patch domain containing 2 like	protein-coding	25.6	1.94	13.19587629	4.03E-16
chr14-1696	chr14	76898279	76899279	+	16.6	1000	"intron (NM_004452, intron 3 of 10)"	"intron (NM_004452, intron 3 of 10)"	61089	NM_004452	2103	Hs.435845	NM_004452	ENSG00000119715	ESRRB	DFNB35|ERR2|ERRb|ESRL2|NR3B2	estrogen related receptor beta	protein-coding	16.64	0	17.14115603	3.68E-16
chr14-1705	chr14	91042320	91043320	+	16.6	1000	"intron (NM_001320421, intron 20 of 20)"	"intron (NM_001320421, intron 20 of 20)"	-59267	NR_135274	105370619	Hs.525530	NR_135274		LOC105370619	-	uncharacterized LOC105370619	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr14-1708	chr14	91089257	91090257	+	16	1000	"intron (NM_001320421, intron 15 of 20)"	"intron (NM_001320421, intron 15 of 20)"	-19216	NR_110134	101928909	Hs.662545	NR_110134	ENSG00000259163	LOC101928909	-	uncharacterized LOC101928909	ncRNA	16	3.4	4.705882353	2.25E-05
chr14-1710	chr14	92828340	92829592	+	20.5	1252	"intron (NM_153646, intron 2 of 16)"	"intron (NM_153646, intron 2 of 16)"	38814	NM_153646	123041	Hs.385530	NM_153646	ENSG00000140090	SLC24A4	AI2A5|NCKX4|SHEP6|SLC24A2	solute carrier family 24 member 4	protein-coding	20.48	0	21.09680742	5.97E-21
chr14-1712	chr14	93998942	93999942	+	16	1000	"intron (NM_001346218, intron 11 of 50)"	"intron (NM_001346218, intron 11 of 50)"	102164	NM_001346218	57578	Hs.126561	NM_020818	ENSG00000133958	UNC79	KIAA1409	unc-79 homolog (C. elegans)	protein-coding	16	3.88	4.12371134	7.91E-05
chr14-1713	chr14	94056064	94057064	+	17.3	1000	"intron (NM_001346218, intron 22 of 50)"	MLT1C|LTR|ERVL-MaLR	159286	NM_001346218	57578	Hs.126561	NM_020818	ENSG00000133958	UNC79	KIAA1409	unc-79 homolog (C. elegans)	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr14-1724	chr14	95140917	95141917	+	16	1000	Intergenic	AluSz6|SINE|Alu	34355	NR_015340	388007	Hs.527795	NR_015340	ENSG00000187483	SERPINA13P	SERPINA13|UNQ6121	"serpin family A member 13, pseudogene"	pseudo	16	1.94	8.24742268	7.67E-08
chr14-1726	chr14	96176596	96177596	+	16.6	1000	"non-coding (NR_049726, exon 5 of 5)"	"non-coding (NR_049726, exon 5 of 5)"	3437	NM_001098725	8115	Hs.2484	NM_021966	ENSG00000100721	TCL1A	TCL1	T-cell leukemia/lymphoma 1A	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr14-1727	chr14	96532949	96536304	+	43.5	3355	"intron (NM_001282463, intron 2 of 2)"	"intron (NM_001282463, intron 2 of 2)"	28965	NM_001282464	56967	Hs.6434	NM_020215	ENSG00000227051	C14orf132	C14orf88	chromosome 14 open reading frame 132	protein-coding	43.53	7.77	5.602316602	3.96E-15
chr14-1729	chr14	96637552	96638552	+	16.6	1000	Intergenic	MLT1A0|LTR|ERVL-MaLR	-33083	NM_000623	624	Hs.654542	NM_000623	ENSG00000168398	BDKRB2	B2R|BK-2|BK2|BKR2|BRB2	bradykinin receptor B2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr14-1735	chr14	99800292	99801712	+	21.8	1420	Intergenic	MIRc|SINE|MIR	-62952	NM_001282237	64919	Hs.709690	NM_022898	ENSG00000127152	BCL11B	ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IMD49|RIT1|ZNF856B|hRIT1-alpha	B-cell CLL/lymphoma 11B	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr14-1737	chr14	99832504	99833504	+	17.3	1000	Intergenic	AluSx1|SINE|Alu	-94954	NM_001282237	64919	Hs.709690	NM_022898	ENSG00000127152	BCL11B	ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IMD49|RIT1|ZNF856B|hRIT1-alpha	B-cell CLL/lymphoma 11B	protein-coding	17.28	1.46	11.83561644	2.99E-10
chr14-1757	chr14	100381009	100384022	+	48	3013	"intron (NM_001008707, intron 16 of 22)"	MIRc|SINE|MIR	-55297	NM_001330221	51466	Hs.125867	NM_016337	ENSG00000196405	EVL	RNB6	Enah/Vasp-like	protein-coding	48.01	11.65	4.121030043	3.24E-12
chr14-1760	chr14	100416011	100417364	+	19.2	1353	Intergenic	Intergenic	-21125	NM_001330221	51466	Hs.125867	NM_016337	ENSG00000196405	EVL	RNB6	Enah/Vasp-like	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr14-177	chr14	101213737	101215430	+	34.6	1693	Intergenic	AluSx1|SINE|Alu	21381	NM_001317172	8788	Hs.116631	NM_003836	ENSG00000185559	DLK1	DLK|DLK-1|Delta1|FA1|PREF1|Pref-1|ZOG|pG2	delta like non-canonical Notch ligand 1	protein-coding	34.56	7.77	4.447876448	3.74E-10
chr14-1770	chr14	101135994	101141685	+	115.9	5691	"non-coding (NR_024096, exon 2 of 2)"	"non-coding (NR_024096, exon 2 of 2)"	15234	NR_024096	283601	Hs.379802	NM_001007560	ENSG00000196273	LINC00523	C14orf70	long intergenic non-protein coding RNA 523	ncRNA	115.85	27.18	4.262325239	1.42E-28
chr14-1772	chr14	101182277	101183277	+	16	1000	Intergenic	Intergenic	-10425	NM_003836	8788	Hs.116631	NM_003836	ENSG00000185559	DLK1	DLK|DLK-1|Delta1|FA1|PREF1|Pref-1|ZOG|pG2	delta like non-canonical Notch ligand 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr14-1790	chr14	101478504	101479952	+	22.4	1448	Intergenic	AluSz|SINE|Alu	-9175	NR_029871	494328		NR_029871	ENSG00000199088	MIR379	MIRN379|hsa-mir-379|mir-379	microRNA 379	ncRNA	22.4	2.43	9.218106996	2.49E-11
chr14-1795	chr14	101596144	101597144	+	16	1000	Intergenic	L1MEd|LINE|L1	60396	NR_047664	100507257	Hs.301755	NR_047664	ENSG00000223403	MEG9	LINC00584	maternally expressed 9 (non-protein coding)	ncRNA	16	3.4	4.705882353	2.25E-05
chr14-1802	chr14	101865409	101867045	+	26.2	1636	Intergenic	GA-rich|Low_complexity|Low_complexity	8032	NR_126006	338002	Hs.124848	NR_126006	ENSG00000259023	LINC00524	C14orf71	long intergenic non-protein coding RNA 524	ncRNA	26.24	6.31	4.158478605	2.77E-07
chr14-1805	chr14	101906674	101907674	+	18.6	1000	Intergenic	Intergenic	-1239	NR_135240	100507277	Hs.123543	NR_135240	ENSG00000259082	LOC100507277	-	uncharacterized LOC100507277	ncRNA	18.56	4.37	4.247139588	1.41E-05
chr14-1809	chr14	101945392	101946392	+	16.6	1000	Intergenic	L1PA15|LINE|L1	37479	NR_135240	100507277	Hs.123543	NR_135240	ENSG00000259082	LOC100507277	-	uncharacterized LOC100507277	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr14-181	chr14	101690554	101693748	+	46.7	3194	Intergenic	Intergenic	155903	NR_047664	100507257	Hs.301755	NR_047664	ENSG00000223403	MEG9	LINC00584	maternally expressed 9 (non-protein coding)	ncRNA	46.73	10.68	4.375468165	1.21E-12
chr14-1816	chr14	102086315	102087315	+	16.6	1000	Intergenic	Intergenic	59127	NM_001362	1735	Hs.49322	NM_001362	ENSG00000197406	DIO3	5DIII|D3|DIOIII|TXDI3	iodothyronine deiodinase 3	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr14-1817	chr14	102111102	102112102	+	16.6	1000	Intergenic	L1MB3|LINE|L1	83914	NM_001362	1735	Hs.49322	NM_001362	ENSG00000197406	DIO3	5DIII|D3|DIOIII|TXDI3	iodothyronine deiodinase 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr14-1822	chr14	103016351	103017351	+	16.6	1000	Intergenic	Intergenic	10870	NR_036192	100422954		NR_036192	ENSG00000266015	MIR4309	-	microRNA 4309	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr14-1823	chr14	103055380	103056380	+	16.6	1000	Intergenic	AluSg7|SINE|Alu	-3116	NM_015156	23186	Hs.510521	NM_015156	ENSG00000089902	RCOR1	COREST|RCOR	REST corepressor 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr14-1825	chr14	103446737	103448490	+	36.5	1753	"intron (NM_006035, intron 7 of 36)"	"intron (NM_006035, intron 7 of 36)"	58620	NM_030943	81693	Hs.534494	NM_030943	ENSG00000166126	AMN	PRO1028|amnionless	amnion associated transmembrane protein	protein-coding	36.48	3.88	9.402061856	5.49E-18
chr14-1832	chr14	104564780	104572070	+	124.8	7290	"intron (NM_001080464, intron 6 of 15)"	"intron (NM_001080464, intron 6 of 15)"	-15317	NR_029620	406986		NR_029620	ENSG00000207568	MIR203A	MIR203|MIRN203|hsa-mir-203a|miR-203|miRNA203|mir-203a	microRNA 203a	ncRNA	124.82	28.64	4.358240223	2.15E-31
chr14-1839	chr14	104684227	104689069	+	72.3	4842	Intergenic	Intergenic	81588	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	72.33	12.13	5.962901896	6.44E-25
chr14-1848	chr14	104852154	104853154	+	15.4	1000	Intergenic	Intergenic	-193367	NM_001286399	400258	Hs.153827	NM_001008404	ENSG00000184601	C14orf180	C14orf77|NRAC	chromosome 14 open reading frame 180	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr14-1870	chr14	105309193	105310193	+	16	1000	Intergenic	CpG	-21957	NM_001112726	283638	Hs.533721	NM_015005	ENSG00000099814	CEP170B	CEP170R|FAM68C|KIAA0284	centrosomal protein 170B	protein-coding	16	3.88	4.12371134	7.91E-05
chr14-1871	chr14	105352299	105353299	+	16	1000	"exon (NM_001112726, exon 12 of 19)"	"exon (NM_001112726, exon 12 of 19)"	21149	NM_015005	283638	Hs.533721	NM_015005	ENSG00000099814	CEP170B	CEP170R|FAM68C|KIAA0284	centrosomal protein 170B	protein-coding	16	2.43	6.58436214	7.90E-07
chr14-1883	chr14	105587902	105588902	+	17.3	1000	Intergenic	Intergenic	27918	NR_110546	102723354	Hs.569410	NR_110546		LOC102723354	-	uncharacterized LOC102723354	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr14-1884	chr14	105642878	105645836	+	36.5	2958	"intron (NM_001318380, intron 1 of 4)"	"intron (NM_001318380, intron 1 of 4)"	3303	NM_177533	256281	Hs.526432	NM_177533	ENSG00000183828	NUDT14	UGPP|UGPPase	nudix hydrolase 14	protein-coding	36.48	7.77	4.694980695	8.02E-11
chr14-1902	chr14	21236766	21237766	+	16.6	1000	"intron (NM_022360, intron 1 of 1)"	"intron (NM_022360, intron 1 of 1)"	680	NM_022360	64184	Hs.525202	NM_022360	ENSG00000181552	EDDM3B	EP3B|FAM12B|HE3-BETA|HE3B|RAM2	epididymal protein 3B	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr14-1903	chr14	21411362	21412362	+	16	1000	Intergenic	Intergenic	-11768	NM_002934	6036	Hs.728	NM_002934	ENSG00000169385	RNASE2	EDN|RAF3|RNS2	ribonuclease A family member 2	protein-coding	16	0.97	16.49484536	3.54E-11
chr14-1906	chr14	21594857	21596495	+	25	1638	Intergenic	THE1B|LTR|ERVL-MaLR	-22813	NM_001102454	51222	Hs.250493	NM_016423	ENSG00000165804	ZNF219	ZFP219	zinc finger protein 219	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr14-1907	chr14	22184403	22185403	+	16.6	1000	Intergenic	Intergenic	-45671	NM_001317107	26687		NM_001317107		OR4E1	OR4E1P	olfactory receptor family 4 subfamily E member 1 (gene/pseudogene)	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr14-1909	chr14	22422981	22423981	+	16	1000	Intergenic	L1PA15|LINE|L1	-284249	NM_001317107	26687		NM_001317107		OR4E1	OR4E1P	olfactory receptor family 4 subfamily E member 1 (gene/pseudogene)	protein-coding	16	3.4	4.705882353	2.25E-05
chr14-1910	chr14	22609162	22610162	+	16	1000	Intergenic	Intergenic	448481	NM_001344	1603	Hs.82890	NM_001344	ENSG00000129562	DAD1	OST2	defender against cell death 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr14-1912	chr14	23224925	23225925	+	16	1000	Intergenic	L1ME4a|LINE|L1	-10306	NM_005015	5018	Hs.151134	NM_005015	ENSG00000155463	OXA1L	OXA1	"OXA1L, mitochondrial inner membrane protein"	protein-coding	16	0.49	32.65306122	1.26E-14
chr14-1914	chr14	23636463	23638864	+	40.3	2401	"intron (NM_012244, intron 1 of 10)"	"intron (NM_012244, intron 1 of 10)"	-12996	NM_001267036	23428	Hs.596643	NM_012244	ENSG00000092068	SLC7A8	LAT2|LPI-PC1	solute carrier family 7 member 8	protein-coding	40.33	9.71	4.153450051	1.52E-10
chr14-1918	chr14	23642822	23643822	+	16	1000	"intron (NM_012244, intron 1 of 10)"	"intron (NM_012244, intron 1 of 10)"	9547	NM_012244	23428	Hs.596643	NM_012244	ENSG00000092068	SLC7A8	LAT2|LPI-PC1	solute carrier family 7 member 8	protein-coding	16	2.91	5.498281787	4.98E-06
chr14-1937	chr14	34779448	34780448	+	16	1000	Intergenic	MLT1H1-int|LTR|ERVL-MaLR	151520	NM_138288	171546	Hs.740577	NM_138288	ENSG00000165389	SPTSSA	C14orf147|SSSPTA	serine palmitoyltransferase small subunit A	protein-coding	16	2.91	5.498281787	4.98E-06
chr14-1938	chr14	36741275	36742275	+	16.6	1000	Intergenic	Intergenic	48107	NM_016586	51562	Hs.368647	NM_016586	ENSG00000151332	MBIP	-	MAP3K12 binding inhibitory protein 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr14-1941	chr14	42200270	42201270	+	16	1000	"intron (NM_001346173, intron 1 of 4)"	"intron (NM_001346173, intron 1 of 4)"	124711	NM_152447	145581	Hs.136893	NM_152447	ENSG00000165379	LRFN5	C14orf146|FIGLER8|SALM5	leucine rich repeat and fibronectin type III domain containing 5	protein-coding	16	0.97	16.49484536	3.54E-11
chr14-1950	chr14	55195716	55196716	+	16	1000	"intron (NM_001161576, intron 2 of 10)"	"intron (NM_001161576, intron 2 of 10)"	-25290	NM_001161577	23034	Hs.98259	NM_015589	ENSG00000020577	SAMD4A	SAMD4|SMAUG|SMAUG1|SMG|SMGA	sterile alpha motif domain containing 4A	protein-coding	16	2.91	5.498281787	4.98E-06
chr14-1952	chr14	55237978	55239542	+	25.6	1564	"intron (NM_001161577, intron 4 of 8)"	MamRep434|DNA|TcMar-Tigger	17254	NM_001161577	23034	Hs.98259	NM_015589	ENSG00000020577	SAMD4A	SAMD4|SMAUG|SMAUG1|SMG|SMGA	sterile alpha motif domain containing 4A	protein-coding	25.6	5.82	4.39862543	7.99E-08
chr14-1954	chr14	56394329	56395329	+	16	1000	Intergenic	Intergenic	-131437	NR_026797	645687	Hs.569345	NR_026796		LINC00520	C14orf34	long intergenic non-protein coding RNA 520	ncRNA	16	1.94	8.24742268	7.67E-08
chr14-1959	chr14	56985256	56987190	+	35.2	1934	"intron (NR_135241, intron 1 of 1)"	"intron (NR_135241, intron 1 of 1)"	5174	NR_135241	101927690	Hs.385477	NR_135241	ENSG00000258803	LOC101927690	-	uncharacterized LOC101927690	ncRNA	35.2	7.28	4.835164835	9.40E-11
chr14-1961	chr14	57253732	57254992	+	18.6	1260	Intergenic	Intergenic	18019	NM_172337	5015	Hs.288655	NM_021728	ENSG00000165588	OTX2	CPHD6|MCOPS5	orthodenticle homeobox 2	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr14-1962	chr14	59063384	59064384	+	16	1000	Intergenic	MLT2D|LTR|ERVL	-36902	NR_046093	51339	Hs.48950	NM_016651	ENSG00000165617	DACT1	DAPPER|DAPPER1|DPR1|FRODO|HDPR1|THYEX3	dishevelled binding antagonist of beta catenin 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr14-1971	chr14	65024954	65025954	+	14.7	1000	"intron (NM_172365, intron 3 of 11)"	AluSx|SINE|Alu	8834	NM_172365	145376	Hs.144696	NM_172365	ENSG00000165807	PPP1R36	C14orf50	protein phosphatase 1 regulatory subunit 36	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr14-1973	chr14	65227619	65229788	+	32.6	2169	"intron (NM_001024858, intron 31 of 34)"	"intron (NM_001024858, intron 31 of 34)"	23701	NR_107009	102465841		NR_107009	ENSG00000070182	MIR7855	hsa-mir-7855	microRNA 7855	ncRNA	32.64	4.85	6.729896907	5.03E-13
chr14-1976	chr14	65270676	65271676	+	16	1000	"intron (NM_000347, intron 2 of 30)"	"intron (NM_000347, intron 2 of 30)"	18690	NM_000347	6710	Hs.417303	NM_000347	ENSG00000070182	SPTB	EL3|HS2|HSPTB1|SPH2	"spectrin beta, erythrocytic"	protein-coding	16	1.46	10.95890411	3.44E-09
chr14-1984	chr14	68014534	68015534	+	16	1000	"intron (NM_020715, intron 2 of 28)"	"intron (NM_020715, intron 2 of 28)"	15026	NM_020715	57475	Hs.594236	NM_020715	ENSG00000054690	PLEKHH1	-	"pleckstrin homology, MyTH4 and FERM domain containing H1"	protein-coding	16	1.94	8.24742268	7.67E-08
chr14-1985	chr14	69504441	69505441	+	16	1000	Intergenic	Intergenic	58542	NR_073422	161159	Hs.603341	NR_073422	ENSG00000259062	ACTN1-AS1	C14orf84	ACTN1 antisense RNA 1	ncRNA	16	2.91	5.498281787	4.98E-06
chr14-1989	chr14	69796155	69797155	+	16.6	1000	"intron (NM_020692, intron 6 of 15)"	MSTA|LTR|ERVL-MaLR	68366	NM_004450	2079	Hs.509791	NM_004450	ENSG00000100632	ERH	DROER	enhancer of rudimentary homolog (Drosophila)	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr14-1992	chr14	70025659	70026659	+	16.6	1000	Intergenic	Intergenic	15441	NM_001271507	56936	Hs.458319	NM_020181	ENSG00000267909	CCDC177	C14orf162|PLPL	coiled-coil domain containing 177	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr14-1997	chr14	70449986	70450986	+	14.7	1000	"intron (NM_001034852, intron 5 of 11)"	"intron (NM_001034852, intron 5 of 11)"	96448	NM_182936	6547	Hs.337696	NM_033262	ENSG00000100678	SLC8A3	NCX3	solute carrier family 8 member A3	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr14-2000	chr14	70777164	70778164	+	15.4	1000	Intergenic	L1PA5|LINE|L1	48784	NM_001204090	51241	Hs.709581	NM_016468	ENSG00000133983	COX16	C14orf112|HSPC203	"COX16, cytochrome c oxidase assembly homolog"	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr14-2002	chr14	72979754	72981562	+	28.8	1808	"intron (NM_001204416, intron 14 of 17)"	"intron (NM_001204416, intron 14 of 17)"	-2870	NR_106994	102465832		NR_106994	ENSG00000273830	MIR7843	hsa-mir-7843	microRNA 7843	ncRNA	28.8	4.85	5.93814433	1.30E-10
chr14-2003	chr14	73004666	73005927	+	21.1	1261	"intron (NM_001204418, intron 16 of 16)"	"intron (NM_001204418, intron 16 of 16)"	21768	NR_106994	102465832		NR_106994	ENSG00000273830	MIR7843	hsa-mir-7843	microRNA 7843	ncRNA	21.12	0.97	21.77319588	2.68E-16
chr14-2007	chr14	73206700	73207700	+	16.6	1000	"intron (NM_012074, intron 3 of 9)"	"intron (NM_012074, intron 3 of 9)"	152157	NM_001280544	8110	Hs.162868	NM_012074	ENSG00000205683	DPF3	BAF45C|CERD4	double PHD fingers 3	protein-coding	16.64	0.49	33.95918367	3.68E-16
chr14-2010	chr14	73704879	73708689	+	67.8	3810	"intron (NM_173462, intron 2 of 25)"	"intron (NM_173462, intron 2 of 25)"	2579	NM_173462	89932	Hs.509909	NM_173462	ENSG00000100767	PAPLN	-	"papilin, proteoglycan like sulfated glycoprotein"	protein-coding	67.85	8.74	7.763157895	4.68E-29
chr14-2013	chr14	74690735	74691735	+	14.7	1000	Intergenic	Intergenic	-14940	NM_182894	338917	Hs.449771	NM_182894	ENSG00000119614	VSX2	CHX10|HOX10|MCOP2|MCOPCB3|RET1	visual system homeobox 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr14-2016	chr14	74862079	74863079	+	16.6	1000	Intergenic	Intergenic	30226	NM_001105579	646658	Hs.12400	NM_001105579	ENSG00000183379	SYNDIG1L	CAPUCIN|DSPC1|IFITMD4|TMEM90A	synapse differentiation inducing 1 like	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr14-2019	chr14	75717758	75718758	+	16.6	1000	Intergenic	Intergenic	-27223	NM_005252	2353	Hs.25647	NM_005252	ENSG00000170345	FOS	AP-1|C-FOS|p55	"Fos proto-oncogene, AP-1 transcription factor subunit"	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr14-202	chr14	106343578	106344838	+	26.9	1260	Intergenic	Intergenic	-17624	NR_130468	100616374		NR_130468	ENSG00000265612	MIR4539	-	microRNA 4539	ncRNA	26.88	4.85	5.542268041	7.61E-10
chr14-2022	chr14	76074254	76075254	+	15.4	1000	"intron (NM_001195283, intron 1 of 9)"	"intron (NM_001195283, intron 1 of 9)"	2949	NM_001195283	55640	Hs.509966	NM_017791	ENSG00000119686	FLVCR2	C14orf58|CCT|EPV|FLVCRL14q|MFSD7C|PVHH	feline leukemia virus subgroup C cellular receptor family member 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr14-2024	chr14	77046155	77047673	+	24.3	1518	Intergenic	MIRb|SINE|MIR	-181321	NM_014909	22846	Hs.525479	NM_014909	ENSG00000071246	VASH1	KIAA1036	vasohibin 1	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr14-2028	chr14	77304243	77305243	+	16.6	1000	"intron (NM_194287, intron 5 of 13)"	L1MEg|LINE|L1	12018	NM_194287	145497	Hs.147276	NM_194287	ENSG00000100565	LRRC74A	C14orf166B|LRRC74	leucine rich repeat containing 74A	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr14-2034	chr14	81794954	81795954	+	16	1000	"intron (NM_033104, intron 4 of 5)"	MLT1B|LTR|ERVL-MaLR	98102	NM_033104	85439	Hs.14248	NM_033104	ENSG00000140022	STON2	STN2|STNB|STNB2	stonin 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr14-2037	chr14	81854471	81855471	+	16.6	1000	"intron (NM_033104, intron 3 of 5)"	"intron (NM_033104, intron 3 of 5)"	38585	NM_033104	85439	Hs.14248	NM_033104	ENSG00000140022	STON2	STN2|STNB|STNB2	stonin 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr14-2038	chr14	82181281	82182281	+	16	1000	Intergenic	MLT1I|LTR|ERVL-MaLR	-92376	NR_110074	101928559	Hs.525499	NR_110074	ENSG00000258977	LINC01467	-	long intergenic non-protein coding RNA 1467	ncRNA	16	3.88	4.12371134	7.91E-05
chr14-2039	chr14	88789917	88790917	+	16	1000	promoter-TSS (NM_138317)	promoter-TSS (NM_138317)	-824	NM_138317	54207	Hs.560255	NM_021161	ENSG00000100433	KCNK10	K2p10.1|PPP1R97|TREK-2|TREK2	potassium two pore domain channel subfamily K member 10	protein-coding	16	1.46	10.95890411	3.44E-09
chr14-2040	chr14	90526210	90531132	+	73	4922	"exon (NM_022054, exon 1 of 2)"	"exon (NM_022054, exon 1 of 2)"	562	NM_022054	56659	Hs.510191	NM_022054	ENSG00000152315	KCNK13	K2p13.1|THIK-1|THIK1	potassium two pore domain channel subfamily K member 13	protein-coding	72.97	12.62	5.782091918	6.88E-25
chr14-2044	chr14	91053724	91055373	+	29.4	1649	"intron (NM_001320421, intron 19 of 20)"	"intron (NM_001320421, intron 19 of 20)"	-54425	NR_110134	101928909	Hs.662545	NR_110134	ENSG00000259163	LOC101928909	-	uncharacterized LOC101928909	ncRNA	29.44	5.34	5.513108614	1.33E-10
chr14-2045	chr14	91073978	91075399	+	22.4	1421	"intron (NM_001320421, intron 17 of 20)"	"intron (NM_001320421, intron 17 of 20)"	-34285	NR_110134	101928909	Hs.662545	NR_110134	ENSG00000259163	LOC101928909	-	uncharacterized LOC101928909	ncRNA	22.4	2.91	7.697594502	3.87E-10
chr14-2048	chr14	91567663	91568663	+	14.1	1000	Intergenic	AluJo|SINE|Alu	-12194	NM_024952	80017	Hs.309849	NM_024952	ENSG00000133943	C14orf159	-	chromosome 14 open reading frame 159	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr14-2049	chr14	92786131	92788500	+	33.3	2369	Intergenic	Intergenic	-1610	NM_153648	123041	Hs.385530	NM_153646	ENSG00000140090	SLC24A4	AI2A5|NCKX4|SHEP6|SLC24A2	solute carrier family 24 member 4	protein-coding	33.28	4.85	6.86185567	7.28E-14
chr14-205	chr14	24860137	24861392	+	21.8	1255	Intergenic	Intergenic	-7228	NM_025081	57523	Hs.288348	NM_025081	ENSG00000205978	NYNRIN	CGIN1|KIAA1305	NYN domain and retroviral integrase containing	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr14-2051	chr14	93839934	93842132	+	35.2	2198	"intron (NM_020818, intron 1 of 49)"	AluJb|SINE|Alu	27496	NM_182971	341947	Hs.666459	NM_182971	ENSG00000187581	COX8C	COX8-3	cytochrome c oxidase subunit 8C	protein-coding	35.2	5.82	6.048109966	6.75E-13
chr14-2052	chr14	93869140	93870439	+	18.6	1299	"intron (NM_020818, intron 1 of 49)"	MER4A|LTR|ERV1	-27489	NM_001346218	57578	Hs.126561	NM_020818	ENSG00000133958	UNC79	KIAA1409	unc-79 homolog (C. elegans)	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr14-2056	chr14	94370588	94371588	+	16	1000	TTS (NR_027004)	TTS (NR_027004)	-14152	NM_138344	90050	Hs.525550	NM_138344	ENSG00000140067	FAM181A	C14orf152	family with sequence similarity 181 member A	protein-coding	16	3.88	4.12371134	7.91E-05
chr14-2066	chr14	95334936	95336615	+	25	1679	Intergenic	L1ME5|LINE|L1	98796	NR_144432	108868751		NR_144432		DIGIT	-	"divergent to GSC, Induced by TGF-b family signaling"	ncRNA	24.96	3.88	6.432989691	6.68E-10
chr14-2067	chr14	95477921	95478921	+	16.6	1000	Intergenic	Intergenic	121419	NM_001195573	23405	Hs.87889	NM_030621	ENSG00000100697	DICER1	DCR1|Dicer|Dicer1e|HERNA|K12H4.8-LIKE|MNG1|RMSE2	"dicer 1, ribonuclease III"	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr14-2071	chr14	96386402	96387402	+	16	1000	"intron (NR_132398, intron 2 of 2)"	"intron (NR_132398, intron 2 of 2)"	43793	NR_132398	100507043	Hs.455955	NR_038861	ENSG00000250366	TUNAR	HI-LNC78|LINC00617|TUNA	TCL1 upstream neural differentiation-associated RNA	ncRNA	16	2.43	6.58436214	7.90E-07
chr14-2072	chr14	96519526	96520526	+	14.1	1000	"intron (NM_001282463, intron 2 of 2)"	"intron (NM_001282463, intron 2 of 2)"	14365	NM_001282464	56967	Hs.6434	NM_020215	ENSG00000227051	C14orf132	C14orf88	chromosome 14 open reading frame 132	protein-coding	14.08	0	14.5040551	3.99E-13
chr14-2073	chr14	97190925	97191925	+	16	1000	Intergenic	Intergenic	-72259	NM_003384	7443	Hs.422662	NM_003384	ENSG00000100749	VRK1	PCH1|PCH1A	vaccinia related kinase 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr14-2080	chr14	99848044	99849044	+	16.6	1000	Intergenic	Intergenic	98682	NM_032233	84193	Hs.510407	NM_032233	ENSG00000183576	SETD3	C14orf154	SET domain containing 3	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr14-2083	chr14	100144212	100145212	+	16	1000	"3' UTR (NM_001127258, exon 9 of 9)"	"3' UTR (NM_001127258, exon 9 of 9)"	-6043	NM_006668	10858	Hs.25121	NM_006668	ENSG00000036530	CYP46A1	CP46|CYP46	cytochrome P450 family 46 subfamily A member 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr14-2084	chr14	100196243	100197243	+	14.1	1000	Intergenic	CpG	45988	NM_006668	10858	Hs.25121	NM_006668	ENSG00000036530	CYP46A1	CP46|CYP46	cytochrome P450 family 46 subfamily A member 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr14-211	chr14	91542518	91543518	+	24.3	1000	Intergenic	L2c|LINE|L2	-16025	NM_004755	9252	Hs.510225	NM_004755	ENSG00000100784	RPS6KA5	MSK1|MSPK1|RLPK	ribosomal protein S6 kinase A5	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr14-2113	chr14	101032368	101035738	+	58.2	3370	"intron (NM_020836, intron 2 of 6)"	CpG	354	NM_001159531	57596	Hs.211751	NM_020836	ENSG00000183092	BEGAIN	-	brain enriched guanylate kinase associated	protein-coding	58.25	3.88	15.0128866	2.09E-36
chr14-2119	chr14	101085061	101086061	+	15.4	1000	Intergenic	MER46C|DNA|TcMar-Tigger	-38044	NR_024096	283601	Hs.379802	NM_001007560	ENSG00000196273	LINC00523	C14orf70	long intergenic non-protein coding RNA 523	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr14-2128	chr14	101226614	101230344	+	59.5	3730	Intergenic	L1MB8|LINE|L1	35277	NM_001317172	8788	Hs.116631	NM_003836	ENSG00000185559	DLK1	DLK|DLK-1|Delta1|FA1|PREF1|Pref-1|ZOG|pG2	delta like non-canonical Notch ligand 1	protein-coding	59.53	12.13	4.907666941	1.48E-17
chr14-2157	chr14	101774609	101775884	+	18.6	1275	Intergenic	HERVH-int|LTR|ERV1	99013	NR_126006	338002	Hs.124848	NR_126006	ENSG00000259023	LINC00524	C14orf71	long intergenic non-protein coding RNA 524	ncRNA	18.56	0	19.11898173	9.96E-18
chr14-2172	chr14	102035813	102036813	+	18.6	1000	Intergenic	L1MA8|LINE|L1	8625	NM_001362	1735	Hs.49322	NM_001362	ENSG00000197406	DIO3	5DIII|D3|DIOIII|TXDI3	iodothyronine deiodinase 3	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr14-2178	chr14	102142582	102143582	+	16	1000	Intergenic	PABL_A-int|LTR|ERV1	-53692	NR_026774	145200	Hs.150840	NR_026774	ENSG00000258512	LINC00239	C14orf72|NCRNA00239	long intergenic non-protein coding RNA 239	ncRNA	16	2.91	5.498281787	4.98E-06
chr14-2186	chr14	103021914	103023500	+	29.4	1586	Intergenic	Intergenic	16726	NR_036192	100422954		NR_036192	ENSG00000266015	MIR4309	-	microRNA 4309	ncRNA	29.44	6.31	4.665610143	3.01E-09
chr14-2192	chr14	103524976	103525976	+	15.4	1000	Intergenic	L1ME3|LINE|L1	-1734	NM_006035	9578	Hs.654634	NM_006035	ENSG00000198752	CDC42BPB	MRCKB	CDC42 binding protein kinase beta	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr14-2196	chr14	103663898	103665150	+	17.3	1252	Intergenic	MER21C|LTR|ERVL	-9159	NR_033938	100131366	Hs.147881	NR_033938	ENSG00000251533	LINC00605	-	long intergenic non-protein coding RNA 605	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr14-2201	chr14	103757033	103758687	+	26.9	1654	Intergenic	Intergenic	-25761	NR_135269	105378183	Hs.132624	NR_135269		LOC105378183	-	uncharacterized LOC105378183	ncRNA	26.88	4.37	6.151029748	1.19E-10
chr14-2206	chr14	103987837	103988837	+	16	1000	"intron (NM_001823, intron 3 of 7)"	CpG-7449	859	NM_001823	1152	Hs.173724	NM_001823	ENSG00000166165	CKB	B-CK|BCK|CKBB|HEL-211|HEL-S-29	creatine kinase B	protein-coding	16	1.94	8.24742268	7.67E-08
chr14-2207	chr14	104644802	104645802	+	14.7	1000	"intron (NM_015656, intron 13 of 14)"	"intron (NM_015656, intron 13 of 14)"	40242	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr14-2212	chr14	104694958	104695958	+	16	1000	Intergenic	Intergenic	90398	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	16	2.43	6.58436214	7.90E-07
chr14-2214	chr14	104802468	104804401	+	31.4	1933	Intergenic	L1ME3D|LINE|L1	198374	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	31.36	7.77	4.036036036	3.04E-08
chr14-2216	chr14	104818903	104822749	+	49.9	3846	Intergenic	Intergenic	215766	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	49.93	7.28	6.858516484	5.35E-20
chr14-222	chr14	101375149	101376681	+	32	1532	Intergenic	Intergenic	-1561	NR_029863	442915		NR_029863	ENSG00000199005	MIR370	MIRN370|hsa-mir-370|mir-370	microRNA 370	ncRNA	32	7.28	4.395604396	2.08E-09
chr14-2228	chr14	104970041	104971735	+	24.3	1694	Intergenic	MER81|DNA|hAT-Blackjack	-75133	NM_001286399	400258	Hs.153827	NM_001008404	ENSG00000184601	C14orf180	C14orf77|NRAC	chromosome 14 open reading frame 180	protein-coding	24.32	2.91	8.357388316	5.77E-12
chr14-2231	chr14	104982304	104983304	+	16.6	1000	Intergenic	Intergenic	-63217	NM_001286399	400258	Hs.153827	NM_001008404	ENSG00000184601	C14orf180	C14orf77|NRAC	chromosome 14 open reading frame 180	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr14-225	chr14	102002718	102007691	+	97.3	4973	Intergenic	Intergenic	16809	NR_002770	64150	Hs.525597	NR_002770		DIO3OS	C14orf134|DIO3-AS1|DIO3-OS|NCRNA00041	DIO3 opposite strand/antisense RNA (head to head)	ncRNA	97.29	19.42	5.009783728	9.54E-29
chr14-2259	chr14	105552307	105556585	+	89	4278	Intergenic	CpG	-6038	NR_110546	102723354	Hs.569410	NR_110546		LOC102723354	-	uncharacterized LOC102723354	ncRNA	88.97	7.28	12.22115385	2.64E-49
chr14-2265	chr14	105985068	105986068	+	16	1000	Intergenic	AluJo|SINE|Alu	-7372	NM_025268	80757	Hs.157527	NM_025268	ENSG00000184986	TMEM121	hole	transmembrane protein 121	protein-coding	16	3.88	4.12371134	7.91E-05
chr14-2270	chr14	106067491	106068491	+	15.4	1000	Intergenic	Intergenic	-19462	NR_107059	102466889		NR_107059	ENSG00000277030	MIR8071-2	hsa-mir-8071-2	microRNA 8071-2	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr14-2288	chr14	106418022	106419362	+	17.9	1340	Intergenic	FRAM|SINE|Alu	19666	NR_002224	8755	Hs.662288	NR_002224	ENSG00000271968	ADAM6	C14orf96|tMDCIV	ADAM metallopeptidase domain 6 (pseudogene)	pseudo	17.92	3.4	5.270588235	8.42E-07
chr14-2291	chr14	21015708	21016708	+	16	1000	Intergenic	AluSq|SINE|Alu	12882	NM_001110359	390443	Hs.533972	NM_001001673	ENSG00000188655	RNASE9	HEL128|RAK1|h461	ribonuclease A family member 9 (inactive)	protein-coding	16	2.91	5.498281787	4.98E-06
chr14-2295	chr14	21498458	21499458	+	16	1000	"intron (NM_173846, intron 2 of 3)"	"intron (NM_173846, intron 2 of 3)"	613	NM_173846	122664	Hs.406966	NM_173846	ENSG00000179636	TPPP2	C14orf8|CT152|P18|p25beta	tubulin polymerization promoting protein family member 2	protein-coding	16	0.97	16.49484536	3.54E-11
chr14-2302	chr14	22177452	22178452	+	16	1000	Intergenic	L1M5|LINE|L1	-38720	NM_001317107	26687		NM_001317107		OR4E1	OR4E1P	olfactory receptor family 4 subfamily E member 1 (gene/pseudogene)	protein-coding	16	2.91	5.498281787	4.98E-06
chr14-2303	chr14	22351728	22352728	+	15.4	1000	Intergenic	MER47A|DNA|TcMar-Tigger	-212996	NM_001317107	26687		NM_001317107		OR4E1	OR4E1P	olfactory receptor family 4 subfamily E member 1 (gene/pseudogene)	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr14-2304	chr14	22414215	22415215	+	15.4	1000	Intergenic	L1MCa|LINE|L1	-275483	NM_001317107	26687		NM_001317107		OR4E1	OR4E1P	olfactory receptor family 4 subfamily E member 1 (gene/pseudogene)	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr14-2305	chr14	22464379	22465379	+	15.4	1000	Intergenic	MLT1B|LTR|ERVL-MaLR	-325647	NM_001317107	26687		NM_001317107		OR4E1	OR4E1P	olfactory receptor family 4 subfamily E member 1 (gene/pseudogene)	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr14-2310	chr14	23092676	23093676	+	19.2	1000	Intergenic	L3|LINE|CR1	26029	NM_022060	63874	Hs.445665	NM_022060	ENSG00000100439	ABHD4	ABH4	abhydrolase domain containing 4	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr14-2314	chr14	23821785	23829465	+	94.1	7680	TTS (NM_001277174)	TTS (NM_001277174)	-3504	NM_016609	51310	Hs.373498	NM_016609	ENSG00000092096	SLC22A17	24p3R|BOCT|BOIT|NGALR|NGALR2|NGALR3|hBOIT	solute carrier family 22 member 17	protein-coding	94.09	17.96	5.238864143	1.20E-28
chr14-2325	chr14	30052424	30053424	+	15.4	1000	"intron (NM_001330069, intron 17 of 18)"	L3|LINE|CR1	343975	NM_002742	5587	Hs.508999	NM_002742	ENSG00000184304	PRKD1	PKC-MU|PKCM|PKD|PRKCM	protein kinase D1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr14-2328	chr14	33894955	33895955	+	14.7	1000	"intron (NM_001164749, intron 4 of 11)"	"intron (NM_001164749, intron 4 of 11)"	-282688	NR_132771	106635522		NR_132771		SNORA89	-	"small nucleolar RNA, H/ACA box 89"	snoRNA	14.72	1.46	10.08219178	3.66E-08
chr14-2329	chr14	34091930	34092930	+	14.7	1000	"intron (NM_001164749, intron 5 of 11)"	"intron (NM_001164749, intron 5 of 11)"	-85713	NR_132771	106635522		NR_132771		SNORA89	-	"small nucleolar RNA, H/ACA box 89"	snoRNA	14.72	2.91	5.058419244	2.67E-05
chr14-2331	chr14	34244494	34245494	+	16	1000	"intron (NM_001164749, intron 8 of 11)"	"intron (NM_001164749, intron 8 of 11)"	66851	NR_132771	106635522		NR_132771		SNORA89	-	"small nucleolar RNA, H/ACA box 89"	snoRNA	16	1.46	10.95890411	3.44E-09
chr14-2332	chr14	34523557	34524557	+	15.4	1000	Intergenic	(GAAAA)n|Simple_repeat|Simple_repeat	-103773	NM_022073	112399	Hs.135507	NM_022073	ENSG00000129521	EGLN3	HIFP4H3|HIFPH3|PHD3	egl-9 family hypoxia inducible factor 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr14-2333	chr14	34534266	34537501	+	54.4	3235	Intergenic	L1MC3|LINE|L1	-115599	NM_022073	112399	Hs.135507	NM_022073	ENSG00000129521	EGLN3	HIFP4H3|HIFPH3|PHD3	egl-9 family hypoxia inducible factor 3	protein-coding	54.41	7.77	7.002574003	1.47E-21
chr14-2335	chr14	34565655	34566655	+	14.7	1000	Intergenic	Intergenic	-145871	NM_022073	112399	Hs.135507	NM_022073	ENSG00000129521	EGLN3	HIFP4H3|HIFPH3|PHD3	egl-9 family hypoxia inducible factor 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr14-2338	chr14	36579916	36580916	+	15.4	1000	"intron (NR_073454, intron 1 of 2)"	"intron (NR_073454, intron 1 of 2)"	40783	NR_073454	101101773	Hs.640678	NR_073454	ENSG00000257585	LINC00609	-	long intergenic non-protein coding RNA 609	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr14-2339	chr14	36649360	36650360	+	14.1	1000	Intergenic	Intergenic	-4003	NR_049735	100886964	Hs.742592	NR_049735		PTCSC3	-	papillary thyroid carcinoma susceptibility candidate 3 (non-protein coding)	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr14-2346	chr14	50471449	50472449	+	15.4	1000	"non-coding (NR_126496, exon 1 of 5)"	"non-coding (NR_126496, exon 1 of 5)"	1288	NR_126496	283551	Hs.292580	NM_001012706	ENSG00000214900	LINC01588	C14orf182	long intergenic non-protein coding RNA 1588	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr14-2350	chr14	54313926	54314926	+	16	1000	Intergenic	AluSx|SINE|Alu	100776	NR_049843	100847076		NR_049843	ENSG00000266431	MIR5580	-	microRNA 5580	ncRNA	16	3.4	4.705882353	2.25E-05
chr14-2351	chr14	54642586	54643586	+	15.4	1000	Intergenic	AluSz|SINE|Alu	-219477	NM_001202	652	Hs.68879	NM_001202	ENSG00000125378	BMP4	BMP2B|BMP2B1|MCOPS6|OFC11|ZYME	bone morphogenetic protein 4	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr14-2352	chr14	55047163	55048163	+	14.1	1000	"intron (NM_015589, intron 1 of 11)"	"intron (NM_015589, intron 1 of 11)"	13333	NM_015589	23034	Hs.98259	NM_015589	ENSG00000020577	SAMD4A	SAMD4|SMAUG|SMAUG1|SMG|SMGA	sterile alpha motif domain containing 4A	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr14-2356	chr14	55168471	55169780	+	16.6	1309	"exon (NM_001161576, exon 2 of 11)"	"exon (NM_001161576, exon 2 of 11)"	-52381	NM_001161577	23034	Hs.98259	NM_015589	ENSG00000020577	SAMD4A	SAMD4|SMAUG|SMAUG1|SMG|SMGA	sterile alpha motif domain containing 4A	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr14-2358	chr14	55205720	55206720	+	12.8	1000	"intron (NM_015589, intron 3 of 11)"	"intron (NM_015589, intron 3 of 11)"	-15286	NM_001161577	23034	Hs.98259	NM_015589	ENSG00000020577	SAMD4A	SAMD4|SMAUG|SMAUG1|SMG|SMGA	sterile alpha motif domain containing 4A	protein-coding	12.8	1.94	6.597938144	4.51E-06
chr14-2361	chr14	55249341	55251041	+	29.4	1700	"intron (NM_015589, intron 10 of 11)"	"intron (NM_015589, intron 10 of 11)"	28685	NM_001161577	23034	Hs.98259	NM_015589	ENSG00000020577	SAMD4A	SAMD4|SMAUG|SMAUG1|SMG|SMGA	sterile alpha motif domain containing 4A	protein-coding	29.44	3.88	7.587628866	2.58E-13
chr14-2363	chr14	56465622	56469205	+	64.6	3583	Intergenic	Intergenic	-117680	NM_021255	57161	Hs.657926	NM_021255	ENSG00000139946	PELI2	-	pellino E3 ubiquitin protein ligase family member 2	protein-coding	64.65	11.65	5.549356223	3.99E-21
chr14-2367	chr14	57198171	57199465	+	21.8	1294	Intergenic	MER94|DNA|hAT-Blackjack	73563	NM_172337	5015	Hs.288655	NM_021728	ENSG00000165588	OTX2	CPHD6|MCOPS5	orthodenticle homeobox 2	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr14-2369	chr14	57279310	57280310	+	15.4	1000	promoter-TSS (NR_029385)	promoter-TSS (NR_029385)	-91	NR_029385	100309464	Hs.637962	NR_029385	ENSG00000248550	OTX2-AS1	OTX2OS1	OTX2 antisense RNA 1 (head to head)	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr14-2372	chr14	57554313	57555313	+	15.4	1000	Intergenic	Intergenic	-180793	NM_018229	55745	Hs.597349	NM_018229	ENSG00000053770	AP5M1	C14orf108|MUDENG|Mu5|MuD	adaptor related protein complex 5 mu 1 subunit	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr14-2375	chr14	58624193	58625193	+	14.7	1000	Intergenic	Intergenic	-5736	NM_001320173	145407	Hs.26766	NM_001001872	ENSG00000139971	C14orf37	UT2|c14_5376	chromosome 14 open reading frame 37	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr14-2376	chr14	59074200	59075200	+	15.4	1000	Intergenic	Intergenic	-26086	NR_046093	51339	Hs.48950	NM_016651	ENSG00000165617	DACT1	DAPPER|DAPPER1|DPR1|FRODO|HDPR1|THYEX3	dishevelled binding antagonist of beta catenin 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr14-2378	chr14	61104246	61105246	+	15.4	1000	Intergenic	Intergenic	-1188	NR_126480	104548971		NR_126480		SALRNA1	SAL-RNA1|XLOC_023166	senescence associated long non-coding RNA 1	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr14-2383	chr14	62358198	62359198	+	16	1000	Intergenic	Intergenic	-103843	NM_031914	83851	Hs.404139	NM_031914	ENSG00000139973	SYT16	CHR14SYT|SYT14L|Strep14|syt14r|yt14r	synaptotagmin 16	protein-coding	16	3.4	4.705882353	2.25E-05
chr14-2384	chr14	62587761	62588761	+	15.4	1000	"intron (NR_015358, intron 2 of 3)"	L1PA15|LINE|L1	4186	NR_015358	646113	Hs.445241	NM_001039785		LINC00643	-	long intergenic non-protein coding RNA 643	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr14-2385	chr14	62619399	62620847	+	22.4	1448	Intergenic	L1M5|LINE|L1	-13432	NR_104063	101954204	Hs.607093	NR_104063	ENSG00000259142	LINC00644	-	long intergenic non-protein coding RNA 644	ncRNA	22.4	3.88	5.773195876	2.53E-08
chr14-2386	chr14	62745334	62746787	+	21.1	1453	Intergenic	MLT1A|LTR|ERVL-MaLR	-139369	NR_104063	101954204	Hs.607093	NR_104063	ENSG00000259142	LINC00644	-	long intergenic non-protein coding RNA 644	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr14-2388	chr14	63377833	63378833	+	15.4	1000	"intron (NM_172375, intron 7 of 9)"	L1M5|LINE|L1	133623	NM_172375	27133	Hs.27043	NM_139318	ENSG00000140015	KCNH5	EAG2|H-EAG2|Kv10.2|hEAG2	potassium voltage-gated channel subfamily H member 5	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr14-2392	chr14	65194209	65195209	+	16	1000	"intron (NM_001308147, intron 2 of 16)"	"intron (NM_001308147, intron 2 of 16)"	23583	NM_001308147	26030	Hs.509637	NM_015549	ENSG00000126822	PLEKHG3	ARHGEF43|KIAA0599	pleckstrin homology and RhoGEF domain containing G3	protein-coding	16	1.94	8.24742268	7.67E-08
chr14-2393	chr14	65684171	65685808	+	23	1637	"intron (NR_103769, intron 2 of 3)"	"intron (NR_103769, intron 2 of 3)"	4076	NR_103769	100128233	Hs.497323	NR_103769	ENSG00000255002	LOC100128233	-	uncharacterized LOC100128233	ncRNA	23.04	4.37	5.272311213	2.46E-08
chr14-2394	chr14	67979141	67980835	+	25.6	1694	"intron (NM_182526, intron 1 of 2)"	"intron (NM_182526, intron 1 of 2)"	2033	NM_182526	161145	Hs.509707	NM_182526	ENSG00000198133	TMEM229B	C14orf83	transmembrane protein 229B	protein-coding	25.6	5.82	4.39862543	7.99E-08
chr14-2397	chr14	68040382	68041382	+	15.4	1000	"intron (NM_020715, intron 13 of 28)"	"intron (NM_020715, intron 13 of 28)"	26135	NM_004569	5283	Hs.553497	NM_004569	ENSG00000100564	PIGH	GPI-H	phosphatidylinositol glycan anchor biosynthesis class H	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr14-2399	chr14	70042483	70043483	+	14.1	1000	Intergenic	L2|LINE|L2	-1383	NM_001271507	56936	Hs.458319	NM_020181	ENSG00000267909	CCDC177	C14orf162|PLPL	coiled-coil domain containing 177	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr14-2404	chr14	70387161	70388161	+	15.4	1000	"intron (NM_001034852, intron 1 of 11)"	"intron (NM_001034852, intron 1 of 11)"	41547	NM_022137	64093	Hs.497349	NM_022137	ENSG00000198732	SMOC1	OAS	SPARC related modular calcium binding 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr14-2406	chr14	70485664	70487087	+	19.2	1423	"intron (NM_001034852, intron 10 of 11)"	"intron (NM_001034852, intron 10 of 11)"	60559	NM_182936	6547	Hs.337696	NM_033262	ENSG00000100678	SLC8A3	NCX3	solute carrier family 8 member A3	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr14-2410	chr14	71652948	71653948	+	15.4	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	-211606	NR_001276	319139		NR_001276	ENSG00000207444	SNORD56B	RNU56B	"small nucleolar RNA, C/D box 56B"	snoRNA	15.36	2.91	5.278350515	4.98E-06
chr14-2411	chr14	72734166	72735166	+	15.4	1000	"intron (NM_001204416, intron 2 of 17)"	"intron (NM_001204416, intron 2 of 17)"	-248862	NR_106994	102465832		NR_106994	ENSG00000273830	MIR7843	hsa-mir-7843	microRNA 7843	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr14-2414	chr14	73259301	73260301	+	15.4	1000	"intron (NM_012074, intron 1 of 9)"	"intron (NM_012074, intron 1 of 9)"	99556	NM_001280544	8110	Hs.162868	NM_012074	ENSG00000205683	DPF3	BAF45C|CERD4	double PHD fingers 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr14-2416	chr14	74848966	74850220	+	19.8	1254	Intergenic	L1ME2z|LINE|L1	34427	NM_018228	55237	Hs.578167	NM_018228	ENSG00000133980	VRTN	C14orf115|vertnin	vertebrae development associated	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr14-2421	chr14	74990060	74991060	+	16	1000	"intron (NM_000428, intron 15 of 35)"	"intron (NM_000428, intron 15 of 35)"	30137	NM_194279	122961	Hs.291079	NM_194279	ENSG00000165898	ISCA2	HBLD1|ISA2|MMDS4|c14_5557	iron-sulfur cluster assembly 2	protein-coding	16	0	16.4818808	1.26E-14
chr14-2424	chr14	75712094	75713661	+	26.9	1567	Intergenic	MLT1K|LTR|ERVL-MaLR	-32604	NM_005252	2353	Hs.25647	NM_005252	ENSG00000170345	FOS	AP-1|C-FOS|p55	"Fos proto-oncogene, AP-1 transcription factor subunit"	protein-coding	26.88	4.37	6.151029748	1.19E-10
chr14-243	chr14	23013604	23016515	+	49.3	2911	Intergenic	Intergenic	43084	NM_001344	1603	Hs.82890	NM_001344	ENSG00000129562	DAD1	OST2	defender against cell death 1	protein-coding	49.29	10.68	4.615168539	5.88E-14
chr14-2430	chr14	75943228	75944639	+	20.5	1411	Intergenic	AluJb|SINE|Alu	-44851	NM_006399	10538	Hs.509964	NM_006399	ENSG00000156127	BATF	B-ATF|BATF1|SFA-2|SFA2	basic leucine zipper ATF-like transcription factor	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr14-2432	chr14	75947105	75948105	+	16	1000	Intergenic	L1MC2|LINE|L1	-41179	NM_006399	10538	Hs.509964	NM_006399	ENSG00000156127	BATF	B-ATF|BATF1|SFA-2|SFA2	basic leucine zipper ATF-like transcription factor	protein-coding	16	3.88	4.12371134	7.91E-05
chr14-2433	chr14	76053452	76054452	+	15.4	1000	"intron (NM_017791, intron 1 of 9)"	"intron (NM_017791, intron 1 of 9)"	-8021	NR_110552	102724153	Hs.615289	NR_110552	ENSG00000224721	LOC102724153	-	uncharacterized LOC102724153	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr14-2436	chr14	77019636	77020636	+	14.7	1000	Intergenic	AluSx1|SINE|Alu	182446	NM_004452	2103	Hs.435845	NM_004452	ENSG00000119715	ESRRB	DFNB35|ERR2|ERRb|ESRL2|NR3B2	estrogen related receptor beta	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr14-2437	chr14	77058876	77059876	+	15.4	1000	Intergenic	AluSz|SINE|Alu	-168859	NM_014909	22846	Hs.525479	NM_014909	ENSG00000071246	VASH1	KIAA1036	vasohibin 1	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr14-2442	chr14	77365680	77367899	+	32	2219	Intergenic	Intergenic	-59192	NR_133913	105370578	Hs.574184	NR_133913	ENSG00000258602	LINC01629	linc-KIAA1737-2	long intergenic non-protein coding RNA 1629	ncRNA	32	5.82	5.498281787	2.32E-11
chr14-2443	chr14	77478716	77479716	+	14.7	1000	Intergenic	Intergenic	15826	NM_024496	64207	Hs.179260	NM_024496	ENSG00000119669	IRF2BPL	C14orf4|EAP1	interferon regulatory factor 2 binding protein like	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr14-2445	chr14	77940642	77942268	+	27.5	1626	"3' UTR (NM_199296, exon 7 of 7)"	"3' UTR (NM_199296, exon 7 of 7)"	17082	NM_012111	10598	Hs.204041	NM_012111	ENSG00000100591	AHSA1	AHA1|C14orf3|hAha1|p38	activator of HSP90 ATPase activity 1	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr14-2446	chr14	78443864	78444864	+	16	1000	Intergenic	Intergenic	177938	NM_020421	57143	Hs.413208	NM_020421	ENSG00000063761	ADCK1	-	aarF domain containing kinase 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr14-2448	chr14	88363331	88364331	+	16	1000	Intergenic	Intergenic	95784	NM_001201401	2581	Hs.513439	NM_000153	ENSG00000054983	GALC	-	galactosylceramidase	protein-coding	16	3.4	4.705882353	2.25E-05
chr14-2449	chr14	88767358	88768358	+	15.4	1000	"intron (NM_021161, intron 1 of 6)"	"intron (NM_021161, intron 1 of 6)"	21735	NM_138317	54207	Hs.560255	NM_021161	ENSG00000100433	KCNK10	K2p10.1|PPP1R97|TREK-2|TREK2	potassium two pore domain channel subfamily K member 10	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr14-245	chr14	23317459	23321576	+	68.5	4117	Intergenic	Intergenic	13775	NM_004995	4323	Hs.2399	NM_004995	ENSG00000157227	MMP14	MMP-14|MMP-X1|MT-MMP|MT-MMP 1|MT1-MMP|MT1MMP|MTMMP1|WNCHRS	matrix metallopeptidase 14	protein-coding	68.49	6.8	10.07205882	3.39E-34
chr14-2452	chr14	90533264	90534264	+	16	1000	"intron (NM_022054, intron 1 of 1)"	L1MB4|LINE|L1	5655	NM_022054	56659	Hs.510191	NM_022054	ENSG00000152315	KCNK13	K2p13.1|THIK-1|THIK1	potassium two pore domain channel subfamily K member 13	protein-coding	16	3.88	4.12371134	7.91E-05
chr14-2457	chr14	92048453	92049453	+	15.4	1000	"intron (NM_024764, intron 26 of 26)"	LTR27|LTR|ERV1	-72129	NM_001284281	55671	Hs.533887	NM_017936	ENSG00000100796	PPP4R3A	FLFL1|KIAA2010|MSTP033|PP4R3|PP4R3A|SMEK1|smk-1|smk1	protein phosphatase 4 regulatory subunit 3A	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr14-2460	chr14	93035066	93036066	+	16	1000	"intron (NM_024832, intron 2 of 9)"	"intron (NM_024832, intron 2 of 9)"	-7013	NM_001319987	79890	Hs.326822	NM_024832	ENSG00000100599	RIN3	-	Ras and Rab interactor 3	protein-coding	16	2.43	6.58436214	7.90E-07
chr14-2462	chr14	93828501	93829501	+	16	1000	"intron (NM_020818, intron 1 of 49)"	L1PREC2|LINE|L1	15464	NM_182971	341947	Hs.666459	NM_182971	ENSG00000187581	COX8C	COX8-3	cytochrome c oxidase subunit 8C	protein-coding	16	3.4	4.705882353	2.25E-05
chr14-2469	chr14	94409801	94413030	+	45.4	3229	"intron (NM_001202429, intron 7 of 9)"	MER5A|DNA|hAT-Charlie	3233	NR_039728	100616140		NR_039728	ENSG00000265768	MIR4506	-	microRNA 4506	ncRNA	45.45	7.28	6.243131868	1.03E-16
chr14-2473	chr14	94621550	94622550	+	15.4	1000	Intergenic	THE1C-int|LTR|ERVL-MaLR	-18599	NM_020958	57718	Hs.259599	NM_020958	ENSG00000119698	PPP4R4	CFAP14|KIAA1622|PP4R4	protein phosphatase 4 regulatory subunit 4	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr14-2474	chr14	94938218	94939218	+	15.4	1000	"intron (NM_001284276, intron 1 of 5)"	"intron (NM_001284276, intron 1 of 5)"	3952	NM_001284275	327657	Hs.317970	NM_175739	ENSG00000170054	SERPINA9	GCET1|SERPINA11|SERPINA11b	serpin family A member 9	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr14-2475	chr14	94979552	94980552	+	16	1000	"intron (NM_173850, intron 2 of 5)"	"intron (NM_173850, intron 2 of 5)"	4129	NM_173850	145264	Hs.99476	NM_173850	ENSG00000165953	SERPINA12	OL-64	serpin family A member 12	protein-coding	16	1.94	8.24742268	7.67E-08
chr14-2477	chr14	95241987	95242987	+	15.4	1000	Intergenic	Intergenic	5508	NR_144432	108868751		NR_144432		DIGIT	-	"divergent to GSC, Induced by TGF-b family signaling"	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr14-2481	chr14	95349063	95350063	+	16	1000	Intergenic	Intergenic	112584	NR_144432	108868751		NR_144432		DIGIT	-	"divergent to GSC, Induced by TGF-b family signaling"	ncRNA	16	3.4	4.705882353	2.25E-05
chr14-2482	chr14	95651932	95652932	+	15.4	1000	"3' UTR (NM_024734, exon 13 of 13)"	"3' UTR (NM_024734, exon 13 of 13)"	-28085	NM_030621	23405	Hs.87889	NM_030621	ENSG00000100697	DICER1	DCR1|Dicer|Dicer1e|HERNA|K12H4.8-LIKE|MNG1|RMSE2	"dicer 1, ribonuclease III"	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr14-2483	chr14	95694511	95697407	+	44.8	2896	"intron (NM_024734, intron 2 of 12)"	MIRb|SINE|MIR	-71612	NM_030621	23405	Hs.87889	NM_030621	ENSG00000100697	DICER1	DCR1|Dicer|Dicer1e|HERNA|K12H4.8-LIKE|MNG1|RMSE2	"dicer 1, ribonuclease III"	protein-coding	44.81	6.8	6.589705882	1.33E-17
chr14-2486	chr14	95780714	95781714	+	15.4	1000	"intron (NM_024734, intron 1 of 12)"	"intron (NM_024734, intron 1 of 12)"	5031	NM_024734	79789	Hs.301478	NM_024734	ENSG00000165959	CLMN	-	calmin	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr14-2496	chr14	97182796	97183796	+	16	1000	Intergenic	AluSx1|SINE|Alu	-80388	NM_003384	7443	Hs.422662	NM_003384	ENSG00000100749	VRK1	PCH1|PCH1A	vaccinia related kinase 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr14-25	chr14	100260163	100264350	+	107.5	4187	"intron (NM_001008707, intron 1 of 22)"	"intron (NM_001008707, intron 1 of 22)"	2511	NM_001008707	2009	Hs.12451	NM_004434	ENSG00000066629	EML1	BH|ELP79|EMAP|EMAPL|HuEMAP	echinoderm microtubule associated protein like 1	protein-coding	107.53	21.84	4.923534799	4.54E-31
chr14-250	chr14	95470899	95472271	+	28.2	1372	Intergenic	Intergenic	128255	NM_001195573	23405	Hs.87889	NM_030621	ENSG00000100697	DICER1	DCR1|Dicer|Dicer1e|HERNA|K12H4.8-LIKE|MNG1|RMSE2	"dicer 1, ribonuclease III"	protein-coding	28.16	5.82	4.838487973	3.50E-09
chr14-2509	chr14	99747727	99748727	+	16	1000	Intergenic	Intergenic	-10177	NM_001282237	64919	Hs.709690	NM_022898	ENSG00000127152	BCL11B	ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IMD49|RIT1|ZNF856B|hRIT1-alpha	B-cell CLL/lymphoma 11B	protein-coding	16	2.91	5.498281787	4.98E-06
chr14-2511	chr14	99767816	99769102	+	19.8	1286	Intergenic	L1MEf|LINE|L1	-30409	NM_001282237	64919	Hs.709690	NM_022898	ENSG00000127152	BCL11B	ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IMD49|RIT1|ZNF856B|hRIT1-alpha	B-cell CLL/lymphoma 11B	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr14-2514	chr14	99809846	99810846	+	15.4	1000	Intergenic	Intergenic	-72296	NM_001282237	64919	Hs.709690	NM_022898	ENSG00000127152	BCL11B	ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IMD49|RIT1|ZNF856B|hRIT1-alpha	B-cell CLL/lymphoma 11B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr14-2516	chr14	99815661	99820351	+	62.7	4690	Intergenic	Intergenic	-79956	NM_001282237	64919	Hs.709690	NM_022898	ENSG00000127152	BCL11B	ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IMD49|RIT1|ZNF856B|hRIT1-alpha	B-cell CLL/lymphoma 11B	protein-coding	62.73	14.08	4.455255682	3.69E-17
chr14-2529	chr14	100252681	100257834	+	104.3	5153	Intergenic	L1MB3|LINE|L1	-4488	NM_004434	2009	Hs.12451	NM_004434	ENSG00000066629	EML1	BH|ELP79|EMAP|EMAPL|HuEMAP	echinoderm microtubule associated protein like 1	protein-coding	104.33	18.44	5.657809111	8.13E-34
chr14-2540	chr14	100331687	100332687	+	15.4	1000	"intron (NM_004434, intron 3 of 21)"	"intron (NM_004434, intron 3 of 21)"	72442	NM_001008707	2009	Hs.12451	NM_004434	ENSG00000066629	EML1	BH|ELP79|EMAP|EMAPL|HuEMAP	echinoderm microtubule associated protein like 1	protein-coding	15.36	0	15.82260557	1.26E-14
chr14-2566	chr14	101072289	101073289	+	16	1000	Intergenic	Intergenic	-36658	NM_020836	57596	Hs.211751	NM_020836	ENSG00000183092	BEGAIN	-	brain enriched guanylate kinase associated	protein-coding	16	2.43	6.58436214	7.90E-07
chr14-2579	chr14	101174223	101179051	+	78.1	4828	Intergenic	AluSx1|SINE|Alu	-16565	NM_003836	8788	Hs.116631	NM_003836	ENSG00000185559	DLK1	DLK|DLK-1|Delta1|FA1|PREF1|Pref-1|ZOG|pG2	delta like non-canonical Notch ligand 1	protein-coding	78.09	17.47	4.469948483	5.20E-21
chr14-2601	chr14	101580205	101581729	+	19.8	1524	Intergenic	Intergenic	44719	NR_047664	100507257	Hs.301755	NR_047664	ENSG00000223403	MEG9	LINC00584	maternally expressed 9 (non-protein coding)	ncRNA	19.84	3.88	5.113402062	7.67E-07
chr14-2612	chr14	101752066	101753066	+	16	1000	Intergenic	Intergenic	121693	NR_126006	338002	Hs.124848	NR_126006	ENSG00000259023	LINC00524	C14orf71	long intergenic non-protein coding RNA 524	ncRNA	16	2.91	5.498281787	4.98E-06
chr14-2616	chr14	101828494	101829494	+	14.7	1000	Intergenic	Intergenic	45265	NR_126006	338002	Hs.124848	NR_126006	ENSG00000259023	LINC00524	C14orf71	long intergenic non-protein coding RNA 524	ncRNA	14.72	0	15.16333034	3.99E-13
chr14-263	chr14	100624804	100627401	+	67.2	2597	promoter-TSS (NM_206918)	promoter-TSS (NM_206918)	-90	NM_206918	123099	Hs.159643	NM_206918	ENSG00000168350	DEGS2	C14orf66|DES2|FADS8	"delta 4-desaturase, sphingolipid 2"	protein-coding	67.21	9.22	7.289587852	4.19E-27
chr14-2644	chr14	102713042	102714042	+	15.4	1000	"intron (NM_001330234, intron 7 of 11)"	HERVFH21-int|LTR|ERV1	-6584	NR_073541	5891	Hs.104119	NM_014226	ENSG00000080823	MOK	RAGE|RAGE-1|RAGE1|STK30	MOK protein kinase	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr14-2649	chr14	103426540	103427813	+	21.8	1273	"intron (NM_006035, intron 20 of 36)"	L1M5|LINE|L1	38183	NM_030943	81693	Hs.534494	NM_030943	ENSG00000166126	AMN	PRO1028|amnionless	amnion associated transmembrane protein	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr14-2653	chr14	103465625	103467336	+	26.9	1711	"intron (NM_006035, intron 4 of 36)"	"intron (NM_006035, intron 4 of 36)"	57262	NM_006035	9578	Hs.654634	NM_006035	ENSG00000198752	CDC42BPB	MRCKB	CDC42 binding protein kinase beta	protein-coding	26.88	3.4	7.905882353	1.25E-12
chr14-2654	chr14	103472611	103473611	+	16	1000	"intron (NM_006035, intron 3 of 36)"	"intron (NM_006035, intron 3 of 36)"	50631	NM_006035	9578	Hs.654634	NM_006035	ENSG00000198752	CDC42BPB	MRCKB	CDC42 binding protein kinase beta	protein-coding	16	3.88	4.12371134	7.91E-05
chr14-2655	chr14	103483512	103484512	+	16	1000	"intron (NM_006035, intron 1 of 36)"	L1MC4|LINE|L1	39730	NM_006035	9578	Hs.654634	NM_006035	ENSG00000198752	CDC42BPB	MRCKB	CDC42 binding protein kinase beta	protein-coding	16	3.88	4.12371134	7.91E-05
chr14-2657	chr14	103517525	103521777	+	72.3	4252	"intron (NM_006035, intron 1 of 36)"	AluSg7|SINE|Alu	4091	NM_006035	9578	Hs.654634	NM_006035	ENSG00000198752	CDC42BPB	MRCKB	CDC42 binding protein kinase beta	protein-coding	72.33	16.5	4.383636364	6.87E-19
chr14-2661	chr14	103567747	103570084	+	46.7	2337	"exon (NM_001077594, exon 2 of 11)"	"exon (NM_001077594, exon 2 of 11)"	2434	NM_001077594	91828	Hs.37712	NM_001077594	ENSG00000205436	EXOC3L4	C14orf73	exocyst complex component 3 like 4	protein-coding	46.73	7.77	6.014157014	1.14E-16
chr14-2684	chr14	104709585	104711753	+	33.3	2168	Intergenic	Intergenic	105609	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	33.28	3.88	8.577319588	4.55E-16
chr14-2699	chr14	104943394	104948890	+	83.9	5496	Intergenic	Intergenic	-99879	NM_001286399	400258	Hs.153827	NM_001008404	ENSG00000184601	C14orf180	C14orf77|NRAC	chromosome 14 open reading frame 180	protein-coding	83.85	17.96	4.668708241	4.47E-23
chr14-2732	chr14	105567339	105568339	+	16	1000	Intergenic	L1MC4a|LINE|L1	7355	NR_110546	102723354	Hs.569410	NR_110546		LOC102723354	-	uncharacterized LOC102723354	ncRNA	16	3.88	4.12371134	7.91E-05
chr14-2749	chr14	106112385	106113385	+	14.7	1000	Intergenic	Intergenic	6380	NR_107059	102466889		NR_107059	ENSG00000277030	MIR8071-2	hsa-mir-8071-2	microRNA 8071-2	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr14-2752	chr14	106258726	106259726	+	16	1000	Intergenic	MSTB1|LTR|ERVL-MaLR	65118	NR_039730	100616135		NR_039730	ENSG00000264024	MIR4507	-	microRNA 4507	ncRNA	16	3.4	4.705882353	2.25E-05
chr14-2760	chr14	106405992	106406992	+	16	1000	Intergenic	Intergenic	22654	NR_026800	9834	Hs.649259	NM_014151	ENSG00000226777	FAM30A	C14orf110|HSPC053|KIAA0125	"family with sequence similarity 30, member A"	ncRNA	16	3.88	4.12371134	7.91E-05
chr14-2767	chr14	21528198	21531776	+	56.3	3578	"intron (NM_001282211, intron 1 of 14)"	"intron (NM_001282211, intron 1 of 14)"	4006	NM_138331	122665	Hs.553572	NM_138331	ENSG00000173431	RNASE8	RAE2	ribonuclease A family member 8	protein-coding	56.33	12.62	4.463549921	1.34E-15
chr14-2771	chr14	22047705	22049585	+	26.9	1880	Intergenic	L3|LINE|CR1	-9770	NM_001005465	26533	Hs.554581	NM_001005465	ENSG00000169208	OR10G3	OR14-40	olfactory receptor family 10 subfamily G member 3	protein-coding	26.88	3.4	7.905882353	1.25E-12
chr14-2780	chr14	23097331	23098331	+	14.1	1000	Intergenic	Intergenic	30684	NM_022060	63874	Hs.445665	NM_022060	ENSG00000100439	ABHD4	ABH4	abhydrolase domain containing 4	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr14-2781	chr14	23119790	23120790	+	14.7	1000	Intergenic	Intergenic	53143	NM_022060	63874	Hs.445665	NM_022060	ENSG00000100439	ABHD4	ABH4	abhydrolase domain containing 4	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr14-2785	chr14	23331321	23332588	+	20.5	1267	Intergenic	AluSq2|SINE|Alu	-8972	NM_014045	26020	Hs.525232	NM_014045	ENSG00000197324	LRP10	LRP-10|LRP9|MST087|MSTP087	LDL receptor related protein 10	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr14-2787	chr14	23607512	23609931	+	33.9	2419	"exon (NM_001267037, exon 3 of 8)"	"exon (NM_001267037, exon 3 of 8)"	14938	NM_182728	23428	Hs.596643	NM_012244	ENSG00000092068	SLC7A8	LAT2|LPI-PC1	solute carrier family 7 member 8	protein-coding	33.92	5.34	6.352059925	6.04E-13
chr14-2788	chr14	23619387	23620387	+	14.1	1000	"intron (NM_012244, intron 3 of 10)"	"intron (NM_012244, intron 3 of 10)"	3772	NM_182728	23428	Hs.596643	NM_012244	ENSG00000092068	SLC7A8	LAT2|LPI-PC1	solute carrier family 7 member 8	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr14-2790	chr14	23842873	23843873	+	14.1	1000	"intron (NM_022789, intron 1 of 1)"	"intron (NM_022789, intron 1 of 1)"	1303	NM_022789	64806	Hs.302036	NM_022789	ENSG00000166090	IL25	IL17E	interleukin 25	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr14-2792	chr14	23857065	23858065	+	15.4	1000	TTS (NR_029595)	TTS (NR_029595)	310	NR_029595	406990		NR_029595	ENSG00000199157	MIR208A	MIR208|MIRN208|MIRN208A|hsa-mir-208a|miRNA208	microRNA 208a	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr14-2794	chr14	23899614	23900614	+	13.4	1000	"exon (NM_000257, exon 10 of 40)"	"exon (NM_000257, exon 10 of 40)"	4781	NM_000257	4625	Hs.719946	NM_000257	ENSG00000092054	MYH7	CMD1S|CMH1|MPD1|MYHCB|SPMD|SPMM	myosin heavy chain 7	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr14-2796	chr14	24164145	24165145	+	14.7	1000	Intergenic	Intergenic	59072	NM_005794	10202	Hs.272499	NM_005794	ENSG00000100867	DHRS2	HEP27|SDR25C1	dehydrogenase/reductase 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr14-2801	chr14	24827509	24829015	+	22.4	1506	Intergenic	AluSz|SINE|Alu	-7855	NM_001320043	4776	Hs.77810	NM_004554	ENSG00000100968	NFATC4	NF-AT3|NF-ATC4|NFAT3	nuclear factor of activated T-cells 4	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr14-2808	chr14	24882453	24885329	+	36.5	2876	"exon (NM_025081, exon 9 of 9)"	"exon (NM_025081, exon 9 of 9)"	-14601	NM_001290256	23351	Hs.713590	NM_015299	ENSG00000100441	KHNYN	KIAA0323	KH and NYN domain containing	protein-coding	36.48	6.31	5.781299525	7.13E-13
chr14-2812	chr14	33397711	33410068	+	183.1	12357	Intergenic	CpG	-4570	NM_001164749	64067	Hs.657892	NM_022123	ENSG00000151322	NPAS3	MOP6|PASD6|bHLHe12	neuronal PAS domain protein 3	protein-coding	183.06	25.24	7.252773376	1.19E-71
chr14-2817	chr14	33658162	33659162	+	15.4	1000	"intron (NM_001164749, intron 2 of 11)"	"intron (NM_001164749, intron 2 of 11)"	250203	NM_173159	64067	Hs.657892	NM_022123	ENSG00000151322	NPAS3	MOP6|PASD6|bHLHe12	neuronal PAS domain protein 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr14-2823	chr14	36962820	36964368	+	22.4	1548	"intron (NR_138596, intron 1 of 4)"	"intron (NR_138596, intron 1 of 4)"	19396	NR_138598	253970	Hs.509165	NM_001101341	ENSG00000229415	SFTA3	NANCI|SFTPH|SP-H	surfactant associated 3	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr14-2825	chr14	36995096	36998788	+	49.3	3692	Intergenic	MLT1A1|LTR|ERVL-MaLR	-7512	NM_001079668	7080	Hs.94367	NM_003317	ENSG00000136352	NKX2-1	BCH|BHC|NK-2|NKX2.1|NKX2A|NMTC1|T/EBP|TEBP|TITF1|TTF-1|TTF1	NK2 homeobox 1	protein-coding	49.29	8.74	5.639588101	1.25E-16
chr14-2832	chr14	37333368	37334660	+	17.9	1292	"intron (NM_030631, intron 2 of 9)"	"intron (NM_030631, intron 2 of 9)"	87582	NR_039725	100616280		NR_039725	ENSG00000266327	MIR4503	-	microRNA 4503	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr14-2846	chr14	54788084	54789361	+	16.6	1277	Intergenic	AluSx|SINE|Alu	-74864	NM_001330173	1033	Hs.84113	NM_005192	ENSG00000100526	CDKN3	CDI1|CIP2|KAP|KAP1	cyclin dependent kinase inhibitor 3	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr14-2848	chr14	54962621	54964166	+	21.8	1545	Intergenic	HERV35I-int|LTR|ERV1	-7649	NM_004124	2764	Hs.151413	NM_004124	ENSG00000197045	GMFB	GMF	glia maturation factor beta	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr14-2853	chr14	55075423	55078641	+	41	3218	"intron (NM_015589, intron 1 of 11)"	"intron (NM_015589, intron 1 of 11)"	42702	NM_015589	23034	Hs.98259	NM_015589	ENSG00000020577	SAMD4A	SAMD4|SMAUG|SMAUG1|SMG|SMGA	sterile alpha motif domain containing 4A	protein-coding	40.97	2.91	14.0790378	1.11E-25
chr14-2855	chr14	55160276	55161276	+	14.7	1000	"intron (NM_015589, intron 1 of 11)"	L2a|LINE|L2	-60730	NM_001161577	23034	Hs.98259	NM_015589	ENSG00000020577	SAMD4A	SAMD4|SMAUG|SMAUG1|SMG|SMGA	sterile alpha motif domain containing 4A	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr14-2856	chr14	55163682	55164682	+	14.1	1000	"intron (NM_015589, intron 1 of 11)"	MamRep605|Unknown|Unknown	-57324	NM_001161577	23034	Hs.98259	NM_015589	ENSG00000020577	SAMD4A	SAMD4|SMAUG|SMAUG1|SMG|SMGA	sterile alpha motif domain containing 4A	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr14-2860	chr14	55242208	55246984	+	59.5	4776	"intron (NM_015589, intron 10 of 11)"	"intron (NM_015589, intron 10 of 11)"	23090	NM_001161577	23034	Hs.98259	NM_015589	ENSG00000020577	SAMD4A	SAMD4|SMAUG|SMAUG1|SMG|SMGA	sterile alpha motif domain containing 4A	protein-coding	59.53	11.65	5.109871245	3.28E-18
chr14-2863	chr14	56431111	56432111	+	14.7	1000	Intergenic	Intergenic	-153482	NM_021255	57161	Hs.657926	NM_021255	ENSG00000139946	PELI2	-	pellino E3 ubiquitin protein ligase family member 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr14-2870	chr14	57181949	57182949	+	14.7	1000	Intergenic	Intergenic	89932	NM_172337	5015	Hs.288655	NM_021728	ENSG00000165588	OTX2	CPHD6|MCOPS5	orthodenticle homeobox 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr14-2871	chr14	57187013	57188013	+	14.1	1000	Intergenic	Intergenic	84868	NM_172337	5015	Hs.288655	NM_021728	ENSG00000165588	OTX2	CPHD6|MCOPS5	orthodenticle homeobox 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr14-2875	chr14	57360191	57361191	+	14.1	1000	"intron (NR_029385, intron 1 of 3)"	"intron (NR_029385, intron 1 of 3)"	80790	NR_029385	100309464	Hs.637962	NR_029385	ENSG00000248550	OTX2-AS1	OTX2OS1	OTX2 antisense RNA 1 (head to head)	ncRNA	14.08	1.46	9.643835616	3.66E-08
chr14-2877	chr14	57824062	57825062	+	15.4	1000	Intergenic	Intergenic	-32709	NM_001011713	122830	Hs.165465	NM_001011713	ENSG00000139977	NAA30	C14orf35|MAK3|Mak3p|NAT12|NAT12P	"N(alpha)-acetyltransferase 30, NatC catalytic subunit"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr14-2878	chr14	58047663	58048663	+	15.4	1000	"intron (NM_001206920, intron 3 of 7)"	"intron (NM_001206920, intron 3 of 7)"	-87582	NM_001283058	55195	Hs.659706	NM_018168	ENSG00000100557	C14orf105	-	chromosome 14 open reading frame 105	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr14-2880	chr14	59100696	59101696	+	15.4	1000	"intron (NR_046093, intron 1 of 3)"	"intron (NR_046093, intron 1 of 3)"	410	NR_046093	51339	Hs.48950	NM_016651	ENSG00000165617	DACT1	DAPPER|DAPPER1|DPR1|FRODO|HDPR1|THYEX3	dishevelled binding antagonist of beta catenin 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr14-2882	chr14	59134069	59135069	+	14.7	1000	Intergenic	Intergenic	29014	NR_046095	51339	Hs.48950	NM_016651	ENSG00000165617	DACT1	DAPPER|DAPPER1|DPR1|FRODO|HDPR1|THYEX3	dishevelled binding antagonist of beta catenin 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr14-2886	chr14	59580328	59581328	+	14.7	1000	Intergenic	Intergenic	-74553	NM_001270520	23002	Hs.19156	NM_014992	ENSG00000100592	DAAM1	-	dishevelled associated activator of morphogenesis 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr14-2908	chr14	65211636	65212636	+	15.4	1000	TTS (NM_001024858)	TTS (NM_001024858)	40268	NR_107009	102465841		NR_107009	ENSG00000070182	MIR7855	hsa-mir-7855	microRNA 7855	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr14-2913	chr14	65366095	65367095	+	14.1	1000	Intergenic	L2|LINE|L2	-14484	NM_001204064	91612	Hs.731537	NM_145165	ENSG00000258289	CHURC1	C14orf52|My015|chch	churchill domain containing 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr14-2914	chr14	66441751	66442751	+	14.1	1000	Intergenic	Intergenic	504431	NR_030355	693210		NR_030355	ENSG00000207781	MIR625	MIRN625|hsa-mir-625	microRNA 625	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr14-2918	chr14	66596185	66597185	+	14.7	1000	Intergenic	Intergenic	-356404	NR_110308	440184	Hs.412138	NM_001004331	ENSG00000196553	LINC00238	C14orf53|NCRNA00238	long intergenic non-protein coding RNA 238	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr14-292	chr14	23650311	23652602	+	41	2291	"intron (NM_012244, intron 1 of 10)"	"intron (NM_012244, intron 1 of 10)"	1413	NM_012244	23428	Hs.596643	NM_012244	ENSG00000092068	SLC7A8	LAT2|LPI-PC1	solute carrier family 7 member 8	protein-coding	40.97	9.22	4.443600868	9.99E-12
chr14-2920	chr14	66693944	66694944	+	13.4	1000	Intergenic	Intergenic	-258645	NR_110308	440184	Hs.412138	NM_001004331	ENSG00000196553	LINC00238	C14orf53|NCRNA00238	long intergenic non-protein coding RNA 238	ncRNA	13.44	2.43	5.530864198	2.99E-05
chr14-2923	chr14	69274490	69276151	+	28.8	1661	Intergenic	Intergenic	-12360	NM_001244701	677	Hs.85155	NM_004926	ENSG00000185650	ZFP36L1	BRF1|Berg36|ERF-1|ERF1|RNF162B|TIS11B|cMG1	ZFP36 ring finger protein like 1	protein-coding	28.8	4.37	6.590389016	1.84E-11
chr14-2925	chr14	69631483	69632483	+	14.7	1000	Intergenic	L1MA2|LINE|L1	-12069	NM_003861	8816	Hs.509780	NM_003861	ENSG00000139990	DCAF5	BCRG2|BCRP2|D14S1461E|WDR22	DDB1 and CUL4 associated factor 5	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr14-2927	chr14	69782762	69783762	+	14.1	1000	"intron (NM_020692, intron 1 of 15)"	L2a|LINE|L2	56581	NM_001168368	57452	Hs.21035	NM_020692	ENSG00000100626	GALNT16	GALNACT16|GALNTL1|GalNAc-T16	polypeptide N-acetylgalactosaminyltransferase 16	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr14-2930	chr14	70308382	70311755	+	42.9	3373	Intergenic	Intergenic	-36046	NM_001034852	64093	Hs.497349	NM_022137	ENSG00000198732	SMOC1	OAS	SPARC related modular calcium binding 1	protein-coding	42.89	10.68	4.015917603	9.13E-11
chr14-2931	chr14	70320605	70323703	+	45.4	3098	Intergenic	Intergenic	-23960	NM_001034852	64093	Hs.497349	NM_022137	ENSG00000198732	SMOC1	OAS	SPARC related modular calcium binding 1	protein-coding	45.45	10.68	4.255617978	5.25E-12
chr14-2932	chr14	70359682	70360682	+	14.7	1000	"intron (NM_001034852, intron 1 of 11)"	"intron (NM_001034852, intron 1 of 11)"	14068	NM_022137	64093	Hs.497349	NM_022137	ENSG00000198732	SMOC1	OAS	SPARC related modular calcium binding 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr14-2936	chr14	70496150	70497150	+	15.4	1000	"intron (NM_022137, intron 11 of 11)"	"intron (NM_022137, intron 11 of 11)"	50284	NM_182936	6547	Hs.337696	NM_033262	ENSG00000100678	SLC8A3	NCX3	solute carrier family 8 member A3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr14-2939	chr14	70784910	70785910	+	14.1	1000	Intergenic	Intergenic	41038	NM_001204090	51241	Hs.709581	NM_016468	ENSG00000133983	COX16	C14orf112|HSPC203	"COX16, cytochrome c oxidase assembly homolog"	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr14-2940	chr14	71293792	71294792	+	15.4	1000	Intergenic	Intergenic	-18404	NM_033141	4293	Hs.445496	NM_033141	ENSG00000006432	MAP3K9	MEKK9|MLK1|PRKE1	mitogen-activated protein kinase kinase kinase 9	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr14-2944	chr14	72495772	72496772	+	14.7	1000	"intron (NM_001204416, intron 2 of 17)"	"intron (NM_001204416, intron 2 of 17)"	96517	NM_001204418	9628	Hs.509872	NM_004296	ENSG00000182732	RGS6	GAP|HA117|S914	regulator of G-protein signaling 6	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr14-2948	chr14	72571755	72572755	+	14.1	1000	"intron (NM_001204416, intron 2 of 17)"	"intron (NM_001204416, intron 2 of 17)"	172500	NM_001204418	9628	Hs.509872	NM_004296	ENSG00000182732	RGS6	GAP|HA117|S914	regulator of G-protein signaling 6	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr14-2949	chr14	72628197	72629197	+	14.1	1000	"intron (NM_001204416, intron 2 of 17)"	"intron (NM_001204416, intron 2 of 17)"	228942	NM_001204418	9628	Hs.509872	NM_004296	ENSG00000182732	RGS6	GAP|HA117|S914	regulator of G-protein signaling 6	protein-coding	14.08	0	14.5040551	3.99E-13
chr14-2950	chr14	72651355	72652355	+	15.4	1000	"intron (NM_001204416, intron 2 of 17)"	MLT2A2|LTR|ERVL	252100	NM_001204418	9628	Hs.509872	NM_004296	ENSG00000182732	RGS6	GAP|HA117|S914	regulator of G-protein signaling 6	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr14-2970	chr14	75739214	75748974	+	191.4	9760	Intergenic	CpG	-1387	NM_005252	2353	Hs.25647	NM_005252	ENSG00000170345	FOS	AP-1|C-FOS|p55	"Fos proto-oncogene, AP-1 transcription factor subunit"	protein-coding	191.38	29.61	6.463356974	5.07E-68
chr14-2975	chr14	75779066	75780066	+	14.1	1000	Intergenic	AluSx1|SINE|Alu	18459	NR_038421	731223	Hs.534624	NR_038421		LINC01220	-	long intergenic non-protein coding RNA 1220	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr14-2976	chr14	75793157	75795645	+	34.6	2488	Intergenic	AluSg|SINE|Alu	33294	NR_038421	731223	Hs.534624	NR_038421		LINC01220	-	long intergenic non-protein coding RNA 1220	ncRNA	34.56	5.82	5.93814433	6.75E-13
chr14-2980	chr14	75895084	75896084	+	15.4	1000	"intron (NM_130469, intron 1 of 3)"	"intron (NM_130469, intron 1 of 3)"	524	NM_130469	122953	Hs.196482	NM_130469	ENSG00000140044	JDP2	JUNDM2	Jun dimerization protein 2	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr14-2981	chr14	76028951	76029951	+	14.7	1000	Intergenic	AluSp|SINE|Alu	-15489	NM_017791	55640	Hs.509966	NM_017791	ENSG00000119686	FLVCR2	C14orf58|CCT|EPV|FLVCRL14q|MFSD7C|PVHH	feline leukemia virus subgroup C cellular receptor family member 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr14-2982	chr14	76046097	76047097	+	14.7	1000	promoter-TSS (NR_110552)	promoter-TSS (NR_110552)	-666	NR_110552	102724153	Hs.615289	NR_110552	ENSG00000224721	LOC102724153	-	uncharacterized LOC102724153	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr14-2991	chr14	77188467	77189467	+	15.4	1000	Intergenic	Intergenic	-39268	NM_014909	22846	Hs.525479	NM_014909	ENSG00000071246	VASH1	KIAA1036	vasohibin 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr14-2995	chr14	77964856	77965856	+	15.4	1000	promoter-TSS (NM_199296)	promoter-TSS (NM_199296)	-146	NM_182509	145501	Hs.29742	NM_182509	ENSG00000100593	ISM2	TAIL1|THSD3	isthmin 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr14-2997	chr14	78438192	78439192	+	14.7	1000	Intergenic	L1MC5|LINE|L1	172266	NM_020421	57143	Hs.413208	NM_020421	ENSG00000063761	ADCK1	-	aarF domain containing kinase 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr14-2999	chr14	81790671	81791671	+	14.7	1000	"intron (NM_033104, intron 4 of 5)"	"intron (NM_033104, intron 4 of 5)"	102385	NM_033104	85439	Hs.14248	NM_033104	ENSG00000140022	STON2	STN2|STNB|STNB2	stonin 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr14-3	chr14	105332245	105336243	+	113.9	3998	"intron (NM_015005, intron 1 of 17)"	"intron (NM_015005, intron 1 of 17)"	2594	NM_015005	283638	Hs.533721	NM_015005	ENSG00000099814	CEP170B	CEP170R|FAM68C|KIAA0284	centrosomal protein 170B	protein-coding	113.93	20.87	5.459032103	4.81E-36
chr14-3002	chr14	86040623	86041623	+	15.4	1000	"intron (NM_001346143, intron 1 of 1)"	"intron (NM_001346143, intron 1 of 1)"	41457	NM_001346143	23768	Hs.533710	NM_013231	ENSG00000185070	FLRT2	-	fibronectin leucine rich transmembrane protein 2	protein-coding	15.36	0	15.82260557	1.26E-14
chr14-3004	chr14	89560649	89562019	+	21.1	1370	Intergenic	MADE1|DNA|TcMar-Mariner	270837	NM_001288782	123016	Hs.303055	NM_144596	ENSG00000165533	TTC8	BBS8|RP51	tetratricopeptide repeat domain 8	protein-coding	21.12	2.43	8.691358025	2.25E-10
chr14-3007	chr14	90623678	90624678	+	15.4	1000	"intron (NM_022054, intron 1 of 1)"	AluSz6|SINE|Alu	96069	NM_022054	56659	Hs.510191	NM_022054	ENSG00000152315	KCNK13	K2p13.1|THIK-1|THIK1	potassium two pore domain channel subfamily K member 13	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr14-3009	chr14	90801816	90803648	+	28.2	1832	Intergenic	AluJo|SINE|Alu	-4251	NM_017970	55051	Hs.528131	NM_017970	ENSG00000119720	NRDE2	C14orf102	"NRDE-2, necessary for RNA interference, domain containing"	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr14-3010	chr14	90901431	90902431	+	14.7	1000	Intergenic	Intergenic	-19643	NR_033986	400238	Hs.131037	NR_033986	ENSG00000233208	LINC00642	-	long intergenic non-protein coding RNA 642	ncRNA	14.72	0.49	30.04081633	3.99E-13
chr14-3012	chr14	91057241	91058241	+	14.1	1000	"intron (NM_001320421, intron 19 of 20)"	"intron (NM_001320421, intron 19 of 20)"	-51232	NR_110134	101928909	Hs.662545	NR_110134	ENSG00000259163	LOC101928909	-	uncharacterized LOC101928909	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr14-3017	chr14	91536607	91537607	+	14.1	1000	Intergenic	L1M7|LINE|L1	-10114	NM_004755	9252	Hs.510225	NM_004755	ENSG00000100784	RPS6KA5	MSK1|MSPK1|RLPK	ribosomal protein S6 kinase A5	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr14-3019	chr14	91547507	91548507	+	14.7	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	-21014	NM_004755	9252	Hs.510225	NM_004755	ENSG00000100784	RPS6KA5	MSK1|MSPK1|RLPK	ribosomal protein S6 kinase A5	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr14-3020	chr14	92663515	92664515	+	14.7	1000	Intergenic	MLT1N2|LTR|ERVL-MaLR	75699	NM_001322272	53981	Hs.657632	NM_017437	ENSG00000165934	CPSF2	CPSF100	cleavage and polyadenylation specific factor 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr14-3024	chr14	93015324	93016324	+	15.4	1000	"intron (NM_024832, intron 1 of 9)"	"intron (NM_024832, intron 1 of 9)"	-26755	NM_001319987	79890	Hs.326822	NM_024832	ENSG00000100599	RIN3	-	Ras and Rab interactor 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr14-3025	chr14	93110878	93111878	+	14.1	1000	"intron (NM_001319987, intron 4 of 8)"	"intron (NM_001319987, intron 4 of 8)"	68799	NM_001319987	79890	Hs.326822	NM_024832	ENSG00000100599	RIN3	-	Ras and Rab interactor 3	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr14-3031	chr14	94364238	94365238	+	14.7	1000	Intergenic	Intergenic	-20502	NM_138344	90050	Hs.525550	NM_138344	ENSG00000140067	FAM181A	C14orf152	family with sequence similarity 181 member A	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr14-3035	chr14	94435209	94437301	+	31.4	2092	"intron (NM_001202429, intron 1 of 9)"	"intron (NM_001202429, intron 1 of 9)"	6821	NM_001202429	51676	Hs.510327	NM_016150	ENSG00000100628	ASB2	ASB-2	ankyrin repeat and SOCS box containing 2	protein-coding	31.36	1.94	16.16494845	8.26E-21
chr14-3037	chr14	94482022	94483022	+	15.4	1000	Intergenic	L3|LINE|CR1	-10202	NM_023112	78990	Hs.278815	NM_023112	ENSG00000089723	OTUB2	C14orf137|OTB2|OTU2	"OTU deubiquitinase, ubiquitin aldehyde binding 2"	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr14-3038	chr14	94486136	94487136	+	15.4	1000	Intergenic	L2a|LINE|L2	-6088	NM_023112	78990	Hs.278815	NM_023112	ENSG00000089723	OTUB2	C14orf137|OTB2|OTU2	"OTU deubiquitinase, ubiquitin aldehyde binding 2"	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr14-3039	chr14	94659957	94660957	+	14.7	1000	"intron (NM_058237, intron 2 of 24)"	"intron (NM_058237, intron 2 of 24)"	19808	NM_058237	57718	Hs.259599	NM_020958	ENSG00000119698	PPP4R4	CFAP14|KIAA1622|PP4R4	protein phosphatase 4 regulatory subunit 4	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr14-3042	chr14	95009694	95011292	+	22.4	1598	Intergenic	L1M4|LINE|L1	-17264	NM_006215	5267	Hs.719893	NM_006215	ENSG00000100665	SERPINA4	KAL|KLST|KST|PI-4|PI4|kallistatin	serpin family A member 4	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr14-3043	chr14	95219050	95220050	+	13.4	1000	Intergenic	Intergenic	16949	NM_173849	145258	Hs.440438	NM_173849	ENSG00000133937	GSC	SAMS	goosecoid homeobox	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr14-3044	chr14	95228402	95229402	+	15.4	1000	Intergenic	Intergenic	7597	NM_173849	145258	Hs.440438	NM_173849	ENSG00000133937	GSC	SAMS	goosecoid homeobox	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr14-3046	chr14	95464979	95465979	+	14.1	1000	Intergenic	Intergenic	134361	NM_001195573	23405	Hs.87889	NM_030621	ENSG00000100697	DICER1	DCR1|Dicer|Dicer1e|HERNA|K12H4.8-LIKE|MNG1|RMSE2	"dicer 1, ribonuclease III"	protein-coding	14.08	0	14.5040551	3.99E-13
chr14-3048	chr14	95489732	95492081	+	33.3	2349	Intergenic	Intergenic	108934	NM_001195573	23405	Hs.87889	NM_030621	ENSG00000100697	DICER1	DCR1|Dicer|Dicer1e|HERNA|K12H4.8-LIKE|MNG1|RMSE2	"dicer 1, ribonuclease III"	protein-coding	33.28	3.88	8.577319588	4.55E-16
chr14-3049	chr14	95769043	95770043	+	15.4	1000	"intron (NM_024734, intron 1 of 12)"	"intron (NM_024734, intron 1 of 12)"	16702	NM_024734	79789	Hs.301478	NM_024734	ENSG00000165959	CLMN	-	calmin	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr14-3050	chr14	96078819	96081041	+	33.3	2222	Intergenic	Intergenic	-37585	NR_028288	27004	Hs.510368	NM_012468	ENSG00000187621	TCL6	TNG1|TNG2	T-cell leukemia/lymphoma 6 (non-protein coding)	ncRNA	33.28	5.82	5.718213058	4.04E-12
chr14-3057	chr14	96698904	96699904	+	15.4	1000	"intron (NM_000623, intron 1 of 2)"	AluJo|SINE|Alu	-23143	NM_000710	623	Hs.525572	NM_000710	ENSG00000100739	BDKRB1	B1BKR|B1R|BDKRB2|BKB1R|BKR1|BRADYB1	bradykinin receptor B1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr14-3059	chr14	97068635	97070489	+	30.1	1854	Intergenic	Intergenic	100360	NM_001293628	10914	Hs.253726	NM_032632	ENSG00000090060	PAPOLA	PAP	poly(A) polymerase alpha	protein-coding	30.08	3.88	7.75257732	2.58E-13
chr14-3064	chr14	97207856	97209844	+	35.2	1988	Intergenic	AluSz6|SINE|Alu	-54834	NM_003384	7443	Hs.422662	NM_003384	ENSG00000100749	VRK1	PCH1|PCH1A	vaccinia related kinase 1	protein-coding	35.2	4.85	7.257731959	1.02E-14
chr14-3076	chr14	100181374	100184672	+	45.4	3298	"intron (NM_006668, intron 9 of 14)"	L2b|LINE|L2	32268	NM_006668	10858	Hs.25121	NM_006668	ENSG00000036530	CYP46A1	CP46|CYP46	cytochrome P450 family 46 subfamily A member 1	protein-coding	45.45	8.74	5.200228833	2.02E-14
chr14-3116	chr14	101045128	101046433	+	17.9	1305	Intergenic	Intergenic	-9649	NM_020836	57596	Hs.211751	NM_020836	ENSG00000183092	BEGAIN	-	brain enriched guanylate kinase associated	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr14-3119	chr14	101067484	101068484	+	15.4	1000	Intergenic	AluSx|SINE|Alu	-31853	NM_020836	57596	Hs.211751	NM_020836	ENSG00000183092	BEGAIN	-	brain enriched guanylate kinase associated	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr14-3131	chr14	101186546	101190625	+	72.3	4079	Intergenic	Intergenic	-4617	NM_003836	8788	Hs.116631	NM_003836	ENSG00000185559	DLK1	DLK|DLK-1|Delta1|FA1|PREF1|Pref-1|ZOG|pG2	delta like non-canonical Notch ligand 1	protein-coding	72.33	17.96	4.027282851	2.57E-17
chr14-3138	chr14	101256474	101257474	+	16	1000	Intergenic	Intergenic	-23854	NR_039729	100616495		NR_039729	ENSG00000266461	MIR2392	-	microRNA 2392	ncRNA	16	2.91	5.498281787	4.98E-06
chr14-3144	chr14	101319505	101325861	+	87.7	6356	"intron (NR_002766, intron 6 of 6)"	"intron (NR_002766, intron 6 of 6)"	3956	NR_030528	768222		NR_030528	ENSG00000211574	MIR770	MIRN770|hsa-mir-770	microRNA 770	ncRNA	87.69	21.84	4.01510989	1.25E-20
chr14-3146	chr14	101330591	101331998	+	19.2	1407	Intergenic	Intergenic	-4103	NR_030172	574450		NR_030172	ENSG00000207989	MIR493	MIRN493|hsa-mir-493|mir-493	microRNA 493	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr14-3153	chr14	101382005	101383005	+	14.7	1000	Intergenic	AluJo|SINE|Alu	5029	NR_029863	442915		NR_029863	ENSG00000199005	MIR370	MIRN370|hsa-mir-370|mir-370	microRNA 370	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr14-3160	chr14	101556197	101557502	+	19.8	1305	Intergenic	AluSp|SINE|Alu	20601	NR_047664	100507257	Hs.301755	NR_047664	ENSG00000223403	MEG9	LINC00584	maternally expressed 9 (non-protein coding)	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr14-3163	chr14	101568595	101569595	+	14.1	1000	Intergenic	MIRc|SINE|MIR	32847	NR_047664	100507257	Hs.301755	NR_047664	ENSG00000223403	MEG9	LINC00584	maternally expressed 9 (non-protein coding)	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr14-3167	chr14	101625664	101626664	+	14.1	1000	Intergenic	L1MCa|LINE|L1	89916	NR_047664	100507257	Hs.301755	NR_047664	ENSG00000223403	MEG9	LINC00584	maternally expressed 9 (non-protein coding)	ncRNA	14.08	1.46	9.643835616	3.66E-08
chr14-3169	chr14	101657432	101662654	+	112.7	5222	Intergenic	Intergenic	123795	NR_047664	100507257	Hs.301755	NR_047664	ENSG00000223403	MEG9	LINC00584	maternally expressed 9 (non-protein coding)	ncRNA	112.65	13.11	8.592677346	1.72E-50
chr14-317	chr14	101205871	101207456	+	33.9	1585	Intergenic	AluSx|SINE|Alu	13461	NM_001317172	8788	Hs.116631	NM_003836	ENSG00000185559	DLK1	DLK|DLK-1|Delta1|FA1|PREF1|Pref-1|ZOG|pG2	delta like non-canonical Notch ligand 1	protein-coding	33.92	5.82	5.828178694	4.04E-12
chr14-3176	chr14	101797160	101798160	+	14.7	1000	Intergenic	Intergenic	76599	NR_126006	338002	Hs.124848	NR_126006	ENSG00000259023	LINC00524	C14orf71	long intergenic non-protein coding RNA 524	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr14-3183	chr14	101936989	101937989	+	15.4	1000	Intergenic	Intergenic	29076	NR_135240	100507277	Hs.123543	NR_135240	ENSG00000259082	LOC100507277	-	uncharacterized LOC100507277	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr14-3189	chr14	101986444	101987444	+	15.4	1000	Intergenic	Intergenic	35069	NR_002770	64150	Hs.525597	NR_002770		DIO3OS	C14orf134|DIO3-AS1|DIO3-OS|NCRNA00041	DIO3 opposite strand/antisense RNA (head to head)	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr14-319	chr14	101311480	101312735	+	26.2	1255	"intron (NR_002766, intron 6 of 6)"	X6B_LINE|LINE|CR1	-6620	NR_030528	768222		NR_030528	ENSG00000211574	MIR770	MIRN770|hsa-mir-770	microRNA 770	ncRNA	26.24	4.85	5.410309278	4.26E-09
chr14-3218	chr14	103434513	103436297	+	36.5	1784	"intron (NM_006035, intron 14 of 36)"	L2a|LINE|L2	46412	NM_030943	81693	Hs.534494	NM_030943	ENSG00000166126	AMN	PRO1028|amnionless	amnion associated transmembrane protein	protein-coding	36.48	8.74	4.173913043	1.05E-09
chr14-3222	chr14	103492220	103493220	+	14.7	1000	"intron (NM_006035, intron 1 of 36)"	AluSc|SINE|Alu	31022	NM_006035	9578	Hs.654634	NM_006035	ENSG00000198752	CDC42BPB	MRCKB	CDC42 binding protein kinase beta	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr14-3223	chr14	103506476	103507476	+	15.4	1000	"intron (NM_006035, intron 1 of 36)"	AluSx1|SINE|Alu	16766	NM_006035	9578	Hs.654634	NM_006035	ENSG00000198752	CDC42BPB	MRCKB	CDC42 binding protein kinase beta	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr14-3226	chr14	103612976	103613976	+	15.4	1000	Intergenic	ERVL-E-int|LTR|ERVL	20812	NM_006291	7127	Hs.525607	NM_006291	ENSG00000185215	TNFAIP2	B94|EXOC3L3	TNF alpha induced protein 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr14-3227	chr14	103646128	103647128	+	14.1	1000	Intergenic	LTR54|LTR|ERV1	8737	NR_033938	100131366	Hs.147881	NR_033938	ENSG00000251533	LINC00605	-	long intergenic non-protein coding RNA 605	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr14-3228	chr14	103685311	103686311	+	15.4	1000	Intergenic	AluJb|SINE|Alu	-30446	NR_033938	100131366	Hs.147881	NR_033938	ENSG00000251533	LINC00605	-	long intergenic non-protein coding RNA 605	ncRNA	15.36	0	15.82260557	1.26E-14
chr14-3231	chr14	103735097	103736097	+	14.1	1000	Intergenic	MER4B-int|LTR|ERV1	-48024	NR_135269	105378183	Hs.132624	NR_135269		LOC105378183	-	uncharacterized LOC105378183	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr14-3237	chr14	104552789	104553789	+	15.4	1000	"intron (NM_001080464, intron 1 of 15)"	"intron (NM_001080464, intron 1 of 15)"	1266	NM_001080464	374569	Hs.146239	NM_001080464	ENSG00000166183	ASPG	C14orf76|GPA/WT	asparaginase	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr14-3240	chr14	104628196	104629742	+	22.4	1546	"intron (NM_015656, intron 4 of 14)"	"intron (NM_015656, intron 4 of 14)"	23909	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr14-3242	chr14	104654368	104664691	+	164.5	10323	Intergenic	Intergenic	54469	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	164.5	32.04	5.134207241	4.26E-48
chr14-3249	chr14	104724389	104725389	+	15.4	1000	Intergenic	L1ME1|LINE|L1	119829	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr14-326	chr14	103537305	103540569	+	55.7	3264	Intergenic	Intergenic	-11610	NM_001330236	107984640		NM_001330236	ENSG00000283071	LOC107984640	-	translation initiation factor IF-2-like	protein-coding	55.69	7.77	7.167310167	2.06E-22
chr14-3272	chr14	104978915	104979915	+	14.1	1000	Intergenic	Intergenic	-66606	NM_001286399	400258	Hs.153827	NM_001008404	ENSG00000184601	C14orf180	C14orf77|NRAC	chromosome 14 open reading frame 180	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr14-3280	chr14	105042611	105049644	+	121.6	7033	"5' UTR (NM_001008404, exon 1 of 5)"	"5' UTR (NM_001008404, exon 1 of 5)"	106	NM_001008404	400258	Hs.153827	NM_001008404	ENSG00000184601	C14orf180	C14orf77|NRAC	chromosome 14 open reading frame 180	protein-coding	121.62	27.18	4.474613687	8.68E-32
chr14-3284	chr14	105098606	105099606	+	15.4	1000	Intergenic	Intergenic	-28009	NM_001286389	388021	Hs.652298	NM_207379	ENSG00000258986	TMEM179	C14orf90|TMEM179A	transmembrane protein 179	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr14-3287	chr14	105262570	105264978	+	60.2	2408	Intergenic	Intergenic	-1694	NM_001014432	207	Hs.525622	NM_005163	ENSG00000142208	AKT1	AKT|CWS6|PKB|PKB-ALPHA|PRKBA|RAC|RAC-ALPHA	AKT serine/threonine kinase 1	protein-coding	60.17	8.74	6.884439359	7.80E-24
chr14-3288	chr14	105339743	105340743	+	14.7	1000	"intron (NM_001112726, intron 2 of 18)"	"intron (NM_001112726, intron 2 of 18)"	8593	NM_015005	283638	Hs.533721	NM_015005	ENSG00000099814	CEP170B	CEP170R|FAM68C|KIAA0284	centrosomal protein 170B	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr14-3290	chr14	105376394	105377394	+	15.4	1000	Intergenic	MER4D1|LTR|ERV1	-14259	NM_001308174	122618	Hs.407101	NM_138790	ENSG00000166428	PLD4	C14orf175	phospholipase D family member 4	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr14-3309	chr14	106189585	106191210	+	25	1625	Intergenic	Intergenic	-51253	NR_046211	2003	Hs.744419	NR_046211		ELK2AP	ELK2|ELK2.1|ELK2P1	"ELK2A, member of ETS oncogene family, pseudogene"	pseudo	24.96	3.4	7.341176471	7.55E-11
chr14-3321	chr14	106381844	106383751	+	32	1907	Intergenic	Intergenic	-1041	NR_026800	9834	Hs.649259	NM_014151	ENSG00000226777	FAM30A	C14orf110|HSPC053|KIAA0125	"family with sequence similarity 30, member A"	ncRNA	32	5.34	5.992509363	3.79E-12
chr14-342	chr14	105635482	105636997	+	30.1	1515	Intergenic	Intergenic	-1078	NM_002226	3714	Hs.433445	NM_002226	ENSG00000184916	JAG2	HJ2|SER2	jagged 2	protein-coding	30.08	4.37	6.883295195	2.70E-12
chr14-358	chr14	94076830	94078094	+	23.7	1264	"intron (NM_001346218, intron 26 of 50)"	"intron (NM_001346218, intron 26 of 50)"	177304	NM_178013	145270	Hs.432401	NM_178004	ENSG00000175785	PRIMA1	PRIMA	proline rich membrane anchor 1	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr14-359	chr14	94174689	94175968	+	25	1279	Intergenic	Intergenic	79438	NM_178013	145270	Hs.432401	NM_178004	ENSG00000175785	PRIMA1	PRIMA	proline rich membrane anchor 1	protein-coding	24.96	2.91	8.577319588	5.77E-12
chr14-382	chr14	102122706	102123706	+	23	1000	Intergenic	Tigger1|DNA|TcMar-Tigger	-73568	NR_026774	145200	Hs.150840	NR_026774	ENSG00000258512	LINC00239	C14orf72|NCRNA00239	long intergenic non-protein coding RNA 239	ncRNA	23.04	4.85	4.750515464	1.15E-07
chr14-385	chr14	104633417	104636472	+	64	3055	"intron (NM_015656, intron 5 of 14)"	"intron (NM_015656, intron 5 of 14)"	29884	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	64.01	9.71	6.592173018	1.93E-24
chr14-400	chr14	105420056	105424824	+	87.1	4768	"intron (NM_138420, intron 4 of 6)"	"intron (NM_138420, intron 4 of 6)"	22254	NM_138420	113146	Hs.441783	NM_138420	ENSG00000185567	AHNAK2	C14orf78	AHNAK nucleoprotein 2	protein-coding	87.05	19.42	4.482492276	2.67E-23
chr14-418	chr14	33790328	33791328	+	21.8	1000	"intron (NM_173159, intron 3 of 11)"	MIRb|SINE|MIR	382369	NM_173159	64067	Hs.657892	NM_022123	ENSG00000151322	NPAS3	MOP6|PASD6|bHLHe12	neuronal PAS domain protein 3	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr14-429	chr14	94439433	94443954	+	92.2	4521	"intron (NM_001202429, intron 1 of 9)"	"intron (NM_001202429, intron 1 of 9)"	1383	NM_001202429	51676	Hs.510327	NM_016150	ENSG00000100628	ASB2	ASB-2	ankyrin repeat and SOCS box containing 2	protein-coding	92.17	8.74	10.54576659	2.22E-47
chr14-433	chr14	100200908	100205396	+	89	4488	Intergenic	L2b|LINE|L2	52397	NM_006668	10858	Hs.25121	NM_006668	ENSG00000036530	CYP46A1	CP46|CYP46	cytochrome P450 family 46 subfamily A member 1	protein-coding	88.97	18.44	4.82483731	3.57E-25
chr14-441	chr14	100404351	100411747	+	155.5	7396	"3' UTR (NM_004434, exon 22 of 22)"	"3' UTR (NM_004434, exon 22 of 22)"	-29763	NM_001330221	51466	Hs.125867	NM_016337	ENSG00000196405	EVL	RNB6	Enah/Vasp-like	protein-coding	155.54	33.01	4.711905483	5.86E-42
chr14-447	chr14	101209529	101211122	+	29.4	1593	Intergenic	ERVL-E-int|LTR|ERVL	17123	NM_001317172	8788	Hs.116631	NM_003836	ENSG00000185559	DLK1	DLK|DLK-1|Delta1|FA1|PREF1|Pref-1|ZOG|pG2	delta like non-canonical Notch ligand 1	protein-coding	29.44	3.88	7.587628866	2.58E-13
chr14-452	chr14	101835584	101839121	+	61.4	3537	Intergenic	L2b|LINE|L2	36907	NR_126006	338002	Hs.124848	NR_126006	ENSG00000259023	LINC00524	C14orf71	long intergenic non-protein coding RNA 524	ncRNA	61.45	14.56	4.220467033	5.82E-16
chr14-463	chr14	104997551	104998810	+	23.7	1259	Intergenic	MER83|LTR|ERV1	-47841	NM_001286399	400258	Hs.153827	NM_001008404	ENSG00000184601	C14orf180	C14orf77|NRAC	chromosome 14 open reading frame 180	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr14-469	chr14	105363837	105366398	+	57	2561	Intergenic	Charlie24|DNA|hAT-Charlie	-26036	NM_001308174	122618	Hs.407101	NM_138790	ENSG00000166428	PLD4	C14orf175	phospholipase D family member 4	protein-coding	56.97	13.11	4.345537757	4.88E-15
chr14-470	chr14	105400519	105404495	+	67.2	3976	Intergenic	Intergenic	11354	NM_138790	122618	Hs.407101	NM_138790	ENSG00000166428	PLD4	C14orf175	phospholipase D family member 4	protein-coding	67.21	12.62	5.325673534	3.79E-21
chr14-474	chr14	105662511	105665619	+	69.1	3108	Intergenic	Intergenic	-16405	NM_001318380	256281	Hs.526432	NM_177533	ENSG00000183828	NUDT14	UGPP|UGPPase	nudix hydrolase 14	protein-coding	69.13	7.28	9.495879121	9.53E-34
chr14-494	chr14	69619884	69621141	+	23.7	1257	promoter-TSS (NM_001284208)	promoter-TSS (NM_001284208)	-598	NM_003861	8816	Hs.509780	NM_003861	ENSG00000139990	DCAF5	BCRG2|BCRP2|D14S1461E|WDR22	DDB1 and CUL4 associated factor 5	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr14-497	chr14	73367605	73368864	+	23.7	1259	Intergenic	Intergenic	-7410	NM_012074	8110	Hs.162868	NM_012074	ENSG00000205683	DPF3	BAF45C|CERD4	double PHD fingers 3	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr14-510	chr14	100217009	100221226	+	74.2	4217	Intergenic	Intergenic	-40628	NM_004434	2009	Hs.12451	NM_004434	ENSG00000066629	EML1	BH|ELP79|EMAP|EMAPL|HuEMAP	echinoderm microtubule associated protein like 1	protein-coding	74.25	11.65	6.373390558	2.36E-27
chr14-518	chr14	100786523	100789615	+	60.2	3092	Intergenic	MIR|SINE|MIR	-1610	NM_207117	283600	Hs.108268	NM_207117	ENSG00000140107	SLC25A47	C14orf68|HDMCP|HMFN1655	solute carrier family 25 member 47	protein-coding	60.17	12.62	4.767828843	1.30E-17
chr14-527	chr14	101298460	101306367	+	132.5	7907	"intron (NR_046464, intron 5 of 7)"	"intron (NR_046464, intron 5 of 7)"	9944	NR_003531	55384	Hs.654863	NR_002766	ENSG00000214548	MEG3	FP504|GTL2|LINC00023|NCRNA00023|PRO0518|PRO2160|onco-lncRNA-83|prebp1	maternally expressed 3 (non-protein coding)	ncRNA	132.5	26.7	4.962546816	8.32E-38
chr14-553	chr14	105396773	105398076	+	22.4	1303	"intron (NM_001308174, intron 7 of 10)"	"intron (NM_001308174, intron 7 of 10)"	6271	NM_138790	122618	Hs.407101	NM_138790	ENSG00000166428	PLD4	C14orf175	phospholipase D family member 4	protein-coding	22.4	5.34	4.194756554	1.97E-06
chr14-558	chr14	106279657	106286976	+	125.5	7319	Intergenic	MLT2D|LTR|ERVL	41028	NR_039730	100616135		NR_039730	ENSG00000264024	MIR4507	-	microRNA 4507	ncRNA	125.46	26.7	4.698876404	2.24E-34
chr14-560	chr14	106306982	106311443	+	81.9	4461	Intergenic	AluSx|SINE|Alu	15132	NR_039730	100616135		NR_039730	ENSG00000264024	MIR4507	-	microRNA 4507	ncRNA	81.93	20.39	4.01814615	1.08E-19
chr14-561	chr14	106315849	106321188	+	89	5339	Intergenic	Intergenic	5826	NR_039730	100616135		NR_039730	ENSG00000264024	MIR4507	-	microRNA 4507	ncRNA	88.97	11.16	7.972222222	8.60E-38
chr14-563	chr14	22187605	22189304	+	29.4	1699	Intergenic	Intergenic	-49222	NM_001317107	26687		NM_001317107		OR4E1	OR4E1P	olfactory receptor family 4 subfamily E member 1 (gene/pseudogene)	protein-coding	29.44	4.37	6.736842105	2.70E-12
chr14-567	chr14	24551081	24552668	+	26.9	1587	"exon (NM_006177, exon 2 of 3)"	"exon (NM_006177, exon 2 of 3)"	1958	NM_006177	4901	Hs.652297	NM_006177	ENSG00000129535	NRL	D14S46E|NRL-MAF|RP27	neural retina leucine zipper	protein-coding	26.88	2.91	9.237113402	7.03E-14
chr14-569	chr14	24868430	24872300	+	55	3870	"intron (NM_025081, intron 2 of 8)"	"intron (NM_025081, intron 2 of 8)"	2373	NM_025081	57523	Hs.288348	NM_025081	ENSG00000205978	NYNRIN	CGIN1|KIAA1305	NYN domain and retroviral integrase containing	protein-coding	55.05	13.11	4.199084668	2.11E-14
chr14-570	chr14	25175372	25177232	+	33.3	1860	Intergenic	Intergenic	-72827	NR_144343	3002	Hs.1051	NM_004131	ENSG00000100453	GZMB	C11|CCPI|CGL-1|CGL1|CSP-B|CSPB|CTLA1|CTSGL1|HLP|SECT	granzyme B	protein-coding	33.28	4.85	6.86185567	7.28E-14
chr14-574	chr14	52780426	52782011	+	32	1585	"5' UTR (NM_000956, exon 1 of 2)"	"5' UTR (NM_000956, exon 1 of 2)"	202	NM_000956	5732	Hs.2090	NM_000956	ENSG00000125384	PTGER2	EP2	prostaglandin E receptor 2	protein-coding	32	4.37	7.322654462	5.18E-14
chr14-579	chr14	75735326	75736580	+	21.8	1254	Intergenic	Intergenic	-9528	NM_005252	2353	Hs.25647	NM_005252	ENSG00000170345	FOS	AP-1|C-FOS|p55	"Fos proto-oncogene, AP-1 transcription factor subunit"	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr14-583	chr14	92039704	92042346	+	51.8	2642	Intergenic	Intergenic	-64201	NM_001284281	55671	Hs.533887	NM_017936	ENSG00000100796	PPP4R3A	FLFL1|KIAA2010|MSTP033|PP4R3|PP4R3A|SMEK1|smk-1|smk1	protein phosphatase 4 regulatory subunit 3A	protein-coding	51.85	6.31	8.217115689	5.17E-23
chr14-586	chr14	95194592	95195592	+	17.9	1000	Intergenic	Intergenic	41407	NM_173849	145258	Hs.440438	NM_173849	ENSG00000133937	GSC	SAMS	goosecoid homeobox	protein-coding	17.92	0.49	36.57142857	9.96E-18
chr14-587	chr14	97202130	97203130	+	20.5	1000	Intergenic	Intergenic	-61054	NM_003384	7443	Hs.422662	NM_003384	ENSG00000100749	VRK1	PCH1|PCH1A	vaccinia related kinase 1	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr14-595	chr14	100249903	100250903	+	19.2	1000	Intergenic	Intergenic	-9342	NM_004434	2009	Hs.12451	NM_004434	ENSG00000066629	EML1	BH|ELP79|EMAP|EMAPL|HuEMAP	echinoderm microtubule associated protein like 1	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr14-600	chr14	100326090	100327090	+	20.5	1000	"intron (NM_001008707, intron 2 of 22)"	"intron (NM_001008707, intron 2 of 22)"	66845	NM_001008707	2009	Hs.12451	NM_004434	ENSG00000066629	EML1	BH|ELP79|EMAP|EMAPL|HuEMAP	echinoderm microtubule associated protein like 1	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr14-605	chr14	101089783	101091449	+	33.3	1666	Intergenic	LTR75|LTR|ERVL	-32989	NR_024096	283601	Hs.379802	NM_001007560	ENSG00000196273	LINC00523	C14orf70	long intergenic non-protein coding RNA 523	ncRNA	33.28	6.31	5.274167987	2.25E-11
chr14-610	chr14	101248863	101251313	+	45.4	2450	Intergenic	Intergenic	-30740	NR_039729	100616495		NR_039729	ENSG00000266461	MIR2392	-	microRNA 2392	ncRNA	45.45	9.22	4.929501085	9.30E-14
chr14-613	chr14	101472530	101474021	+	28.8	1491	Intergenic	AluSx3|SINE|Alu	13702	NR_003224	767612		NR_003224	ENSG00000200089	SNORD114-31	14q(II-31)	"small nucleolar RNA, C/D box 114-31"	snoRNA	28.8	5.82	4.948453608	3.50E-09
chr14-614	chr14	101536970	101544856	+	132.5	7886	Intergenic	Intergenic	4665	NR_047664	100507257	Hs.301755	NR_047664	ENSG00000223403	MEG9	LINC00584	maternally expressed 9 (non-protein coding)	ncRNA	132.5	22.81	5.808855765	1.55E-43
chr14-615	chr14	101602222	101603474	+	22.4	1252	Intergenic	Intergenic	66600	NR_047664	100507257	Hs.301755	NR_047664	ENSG00000223403	MEG9	LINC00584	maternally expressed 9 (non-protein coding)	ncRNA	22.4	2.91	7.697594502	3.87E-10
chr14-620	chr14	101954408	101956109	+	32	1701	Intergenic	L1MEf|LINE|L1	46845	NR_135240	100507277	Hs.123543	NR_135240	ENSG00000259082	LOC100507277	-	uncharacterized LOC100507277	ncRNA	32	7.28	4.395604396	2.08E-09
chr14-624	chr14	102182602	102183864	+	24.3	1262	Intergenic	Intergenic	-13541	NR_026774	145200	Hs.150840	NR_026774	ENSG00000258512	LINC00239	C14orf72|NCRNA00239	long intergenic non-protein coding RNA 239	ncRNA	24.32	4.85	5.01443299	2.27E-08
chr14-627	chr14	103420385	103422566	+	43.5	2181	"intron (NM_006035, intron 21 of 36)"	"intron (NM_006035, intron 21 of 36)"	32482	NM_030943	81693	Hs.534494	NM_030943	ENSG00000166126	AMN	PRO1028|amnionless	amnion associated transmembrane protein	protein-coding	43.53	8.74	4.980549199	1.04E-13
chr14-632	chr14	103681770	103683191	+	26.2	1421	Intergenic	LTR67B|LTR|ERVL	-27115	NR_033938	100131366	Hs.147881	NR_033938	ENSG00000251533	LINC00605	-	long intergenic non-protein coding RNA 605	ncRNA	26.24	6.31	4.158478605	2.77E-07
chr14-634	chr14	104675650	104676650	+	20.5	1000	Intergenic	Intergenic	71090	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	20.48	2.43	8.427983539	2.25E-10
chr14-638	chr14	105015694	105034383	+	361.6	18689	Intergenic	Intergenic	-20983	NM_001286399	400258	Hs.153827	NM_001008404	ENSG00000184601	C14orf180	C14orf77|NRAC	chromosome 14 open reading frame 180	protein-coding	361.65	61.64	5.867131733	3.50E-117
chr14-653	chr14	105980210	105981666	+	28.2	1456	Intergenic	L1PA13|LINE|L1	-12002	NM_025268	80757	Hs.157527	NM_025268	ENSG00000184986	TMEM121	hole	transmembrane protein 121	protein-coding	28.16	5.34	5.27340824	7.39E-10
chr14-665	chr14	21491273	21492843	+	33.9	1570	promoter-TSS (NR_106774)	promoter-TSS (NR_106774)	-513	NR_106774	102465428		NR_106774	ENSG00000165795	MIR6717	hsa-mir-6717	microRNA 6717	ncRNA	33.92	5.82	5.828178694	4.04E-12
chr14-666	chr14	23061317	23062832	+	28.2	1515	Intergenic	LTR36|LTR|ERV1	-3931	NM_001344	1603	Hs.82890	NM_001344	ENSG00000129562	DAD1	OST2	defender against cell death 1	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr14-670	chr14	24835004	24838634	+	64	3630	promoter-TSS (NM_004554)	promoter-TSS (NM_004554)	-407	NM_004554	4776	Hs.77810	NM_004554	ENSG00000100968	NFATC4	NF-AT3|NF-ATC4|NFAT3	nuclear factor of activated T-cells 4	protein-coding	64.01	5.82	10.99828179	3.03E-34
chr14-671	chr14	33952392	33953392	+	19.8	1000	"intron (NM_001164749, intron 4 of 11)"	"intron (NM_001164749, intron 4 of 11)"	-225251	NR_132771	106635522		NR_132771		SNORA89	-	"small nucleolar RNA, H/ACA box 89"	snoRNA	19.84	4.37	4.540045767	3.16E-06
chr14-672	chr14	49954380	49955690	+	23	1310	Intergenic	L1PREC2|LINE|L1	98099	NM_001032	6235	Hs.156367	NM_001032	ENSG00000213741	RPS29	DBA13|S29	ribosomal protein S29	protein-coding	23.04	3.4	6.776470588	5.45E-10
chr14-673	chr14	55595125	55596125	+	19.2	1000	promoter-TSS (NM_001177388)	promoter-TSS (NM_001177388)	-310	NM_001177388	3958	Hs.531081	NM_002306	ENSG00000131981	LGALS3	CBP35|GAL3|GALBP|GALIG|L31|LGALS2|MAC2	galectin 3	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr14-675	chr14	59136713	59137969	+	23	1256	Intergenic	Intergenic	31786	NR_046095	51339	Hs.48950	NM_016651	ENSG00000165617	DACT1	DAPPER|DAPPER1|DPR1|FRODO|HDPR1|THYEX3	dishevelled binding antagonist of beta catenin 1	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr14-678	chr14	62484234	62485234	+	19.2	1000	"intron (NM_031914, intron 1 of 5)"	L2a|LINE|L2	22193	NM_031914	83851	Hs.404139	NM_031914	ENSG00000139973	SYT16	CHR14SYT|SYT14L|Strep14|syt14r|yt14r	synaptotagmin 16	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr14-685	chr14	70654422	70656061	+	31.4	1639	"non-coding (NR_104122, exon 1 of 6)"	"non-coding (NR_104122, exon 1 of 6)"	546	NM_058240	6547	Hs.337696	NM_033262	ENSG00000100678	SLC8A3	NCX3	solute carrier family 8 member A3	protein-coding	31.36	4.85	6.465979381	3.34E-12
chr14-688	chr14	74724702	74726491	+	31.4	1789	"intron (NM_182894, intron 3 of 4)"	"intron (NM_182894, intron 3 of 4)"	19421	NM_182894	338917	Hs.449771	NM_182894	ENSG00000119614	VSX2	CHX10|HOX10|MCOP2|MCOPCB3|RET1	visual system homeobox 2	protein-coding	31.36	4.85	6.465979381	3.34E-12
chr14-691	chr14	75752842	75753842	+	20.5	1000	Intergenic	L2a|LINE|L2	-7765	NR_038421	731223	Hs.534624	NR_038421		LINC01220	-	long intergenic non-protein coding RNA 1220	ncRNA	20.48	4.85	4.222680412	2.52E-06
chr14-694	chr14	77326324	77327889	+	33.3	1565	"exon (NM_194287, exon 11 of 14)"	"exon (NM_194287, exon 11 of 14)"	34381	NM_194287	145497	Hs.147276	NM_194287	ENSG00000100565	LRRC74A	C14orf166B|LRRC74	leucine rich repeat containing 74A	protein-coding	33.28	7.28	4.571428571	4.51E-10
chr14-697	chr14	81902087	81907190	+	74.9	5103	Intergenic	Intergenic	-10890	NM_001256430	85439	Hs.14248	NM_033104	ENSG00000140022	STON2	STN2|STNB|STNB2	stonin 2	protein-coding	74.89	14.56	5.143543956	1.06E-22
chr14-698	chr14	89020850	89022213	+	23.7	1363	promoter-TSS (NM_007039)	promoter-TSS (NM_007039)	-408	NM_007039	11099	Hs.437040	NM_007039	ENSG00000070778	PTPN21	PTPD1|PTPRL10	"protein tyrosine phosphatase, non-receptor type 21"	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr14-704	chr14	94641684	94642684	+	19.8	1000	"intron (NM_058237, intron 1 of 24)"	"intron (NM_058237, intron 1 of 24)"	1535	NM_058237	57718	Hs.259599	NM_020958	ENSG00000119698	PPP4R4	CFAP14|KIAA1622|PP4R4	protein phosphatase 4 regulatory subunit 4	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr14-720	chr14	100301412	100302412	+	19.2	1000	"intron (NM_001008707, intron 1 of 22)"	L1ME1|LINE|L1	42167	NM_001008707	2009	Hs.12451	NM_004434	ENSG00000066629	EML1	BH|ELP79|EMAP|EMAPL|HuEMAP	echinoderm microtubule associated protein like 1	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr14-739	chr14	101359408	101361090	+	28.8	1682	promoter-TSS (NR_024149)	promoter-TSS (NR_024149)	-858	NR_024149	79104	Hs.655789	NR_024149	ENSG00000225746	MEG8	Bsr|Irm|LINC00024|NCRNA00024|Rian	maternally expressed 8 (non-protein coding)	ncRNA	28.8	4.37	6.590389016	1.84E-11
chr14-745	chr14	101919992	101921756	+	29.4	1764	Intergenic	Intergenic	12461	NR_135240	100507277	Hs.123543	NR_135240	ENSG00000259082	LOC100507277	-	uncharacterized LOC100507277	ncRNA	29.44	4.85	6.070103093	2.13E-11
chr14-758	chr14	104769801	104771059	+	22.4	1258	Intergenic	Intergenic	165370	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr14-762	chr14	104904571	104907324	+	45.4	2753	Intergenic	Tigger1|DNA|TcMar-Tigger	-140074	NM_001286399	400258	Hs.153827	NM_001008404	ENSG00000184601	C14orf180	C14orf77|NRAC	chromosome 14 open reading frame 180	protein-coding	45.45	10.68	4.255617978	5.25E-12
chr14-780	chr14	105991194	105994474	+	55	3280	promoter-TSS (NM_025268)	promoter-TSS (NM_025268)	-106	NM_025268	80757	Hs.157527	NM_025268	ENSG00000184986	TMEM121	hole	transmembrane protein 121	protein-coding	55.05	9.71	5.669412976	6.93E-19
chr14-782	chr14	106094745	106096129	+	20.5	1384	Intergenic	Intergenic	7984	NR_107038	102465871		NR_107038	ENSG00000274172	MIR8071-1	hsa-mir-8071-1	microRNA 8071-1	ncRNA	20.48	0.49	41.79591837	5.97E-21
chr14-789	chr14	106409941	106410941	+	19.2	1000	Intergenic	L1MEc|LINE|L1	26603	NR_026800	9834	Hs.649259	NM_014151	ENSG00000226777	FAM30A	C14orf110|HSPC053|KIAA0125	"family with sequence similarity 30, member A"	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr14-795	chr14	55107609	55108609	+	18.6	1000	"intron (NM_015589, intron 1 of 11)"	"intron (NM_015589, intron 1 of 11)"	73779	NM_015589	23034	Hs.98259	NM_015589	ENSG00000020577	SAMD4A	SAMD4|SMAUG|SMAUG1|SMG|SMGA	sterile alpha motif domain containing 4A	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr14-797	chr14	57370285	57371540	+	23.7	1255	"intron (NR_029385, intron 3 of 3)"	"intron (NR_029385, intron 3 of 3)"	91011	NR_029385	100309464	Hs.637962	NR_029385	ENSG00000248550	OTX2-AS1	OTX2OS1	OTX2 antisense RNA 1 (head to head)	ncRNA	23.68	4.85	4.882474227	1.15E-07
chr14-799	chr14	65168390	65174115	+	142.7	5725	"5' UTR (NM_001308147, exon 1 of 17)"	"5' UTR (NM_001308147, exon 1 of 17)"	126	NM_001308147	26030	Hs.509637	NM_015549	ENSG00000126822	PLEKHG3	ARHGEF43|KIAA0599	pleckstrin homology and RhoGEF domain containing G3	protein-coding	142.74	19.42	7.35015448	2.03E-56
chr14-802	chr14	67998635	68003609	+	75.5	4974	"intron (NM_020715, intron 1 of 28)"	AluJr|SINE|Alu	1114	NM_020715	57475	Hs.594236	NM_020715	ENSG00000054690	PLEKHH1	-	"pleckstrin homology, MyTH4 and FERM domain containing H1"	protein-coding	75.53	16.5	4.577575758	7.44E-21
chr14-803	chr14	70281704	70283614	+	33.9	1910	Intergenic	LTR3A|LTR|ERVK	-18653	NM_003049	6554	Hs.952	NM_003049	ENSG00000100652	SLC10A1	NTCP	solute carrier family 10 member 1	protein-coding	33.92	6.31	5.375594295	2.25E-11
chr14-808	chr14	75036706	75037706	+	16.6	1000	"intron (NM_000428, intron 3 of 35)"	"intron (NM_000428, intron 3 of 35)"	41828	NM_000428	4053	Hs.512776	NM_000428	ENSG00000119681	LTBP2	C14orf141|GLC3D|LTBP3|MSPKA|MSTP031|WMS3	latent transforming growth factor beta binding protein 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr14-811	chr14	75859650	75860650	+	17.3	1000	Intergenic	Intergenic	-34359	NM_001135047	122953	Hs.196482	NM_130469	ENSG00000140044	JDP2	JUNDM2	Jun dimerization protein 2	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr14-841	chr14	100391614	100392877	+	21.8	1263	"intron (NM_001008707, intron 18 of 22)"	"intron (NM_001008707, intron 18 of 22)"	-45567	NM_001330221	51466	Hs.125867	NM_016337	ENSG00000196405	EVL	RNB6	Enah/Vasp-like	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr14-843	chr14	100791881	100796820	+	71.7	4939	"intron (NM_207117, intron 4 of 5)"	MIR|SINE|MIR	4671	NM_207117	283600	Hs.108268	NM_207117	ENSG00000140107	SLC25A47	C14orf68|HDMCP|HMFN1655	solute carrier family 25 member 47	protein-coding	71.69	15.53	4.616226658	4.84E-20
chr14-857	chr14	101371120	101372120	+	19.2	1000	"intron (NR_024149, intron 2 of 3)"	"intron (NR_024149, intron 2 of 3)"	-5856	NR_029863	442915		NR_029863	ENSG00000199005	MIR370	MIRN370|hsa-mir-370|mir-370	microRNA 370	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr14-86	chr14	99739216	99743303	+	89.6	4087	Intergenic	CpG	-3209	NM_001282237	64919	Hs.709690	NM_022898	ENSG00000127152	BCL11B	ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IMD49|RIT1|ZNF856B|hRIT1-alpha	B-cell CLL/lymphoma 11B	protein-coding	89.61	22.33	4.012987013	2.39E-21
chr14-864	chr14	101929611	101935197	+	104.3	5586	Intergenic	Intergenic	23991	NR_135240	100507277	Hs.123543	NR_135240	ENSG00000259082	LOC100507277	-	uncharacterized LOC100507277	ncRNA	104.33	22.33	4.672189879	2.15E-28
chr14-866	chr14	102096517	102097517	+	19.2	1000	Intergenic	Intergenic	69329	NM_001362	1735	Hs.49322	NM_001362	ENSG00000197406	DIO3	5DIII|D3|DIOIII|TXDI3	iodothyronine deiodinase 3	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr14-869	chr14	102427887	102428887	+	19.2	1000	Intergenic	Intergenic	-2478	NM_001376	1778	Hs.614080	NM_001376	ENSG00000197102	DYNC1H1	CMT2O|DHC1|DHC1a|DNCH1|DNCL|DNECL|DYHC|Dnchc1|HL-3|SMALED1|p22	dynein cytoplasmic 1 heavy chain 1	protein-coding	19.2	1.46	13.15068493	1.82E-12
chr14-870	chr14	103544788	103545788	+	18.6	1000	Intergenic	Intergenic	-5259	NM_001330236	107984640		NM_001330236	ENSG00000283071	LOC107984640	-	translation initiation factor IF-2-like	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr14-871	chr14	103551696	103553624	+	37.8	1928	"intron (NM_001330236, intron 2 of 3)"	AluSx1|SINE|Alu	2113	NM_001330236	107984640		NM_001330236	ENSG00000283071	LOC107984640	-	translation initiation factor IF-2-like	protein-coding	37.76	6.31	5.984152139	1.20E-13
chr14-874	chr14	103691413	103693875	+	49.3	2462	Intergenic	Intergenic	-37279	NR_033938	100131366	Hs.147881	NR_033938	ENSG00000251533	LINC00605	-	long intergenic non-protein coding RNA 605	ncRNA	49.29	10.68	4.615168539	5.88E-14
chr14-878	chr14	104606651	104609818	+	58.9	3167	"intron (NM_015656, intron 2 of 14)"	"intron (NM_015656, intron 2 of 14)"	3174	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	58.89	7.77	7.579150579	5.01E-25
chr14-884	chr14	104811708	104813081	+	24.3	1373	Intergenic	Intergenic	207334	NM_015656	26153	Hs.134970	NM_015656	ENSG00000066735	KIF26A	-	kinesin family member 26A	protein-coding	24.32	5.34	4.554307116	9.72E-08
chr14-886	chr14	104940217	104941665	+	26.2	1448	Intergenic	Intergenic	-105080	NM_001286399	400258	Hs.153827	NM_001008404	ENSG00000184601	C14orf180	C14orf77|NRAC	chromosome 14 open reading frame 180	protein-coding	26.24	3.4	7.717647059	9.95E-12
chr14-899	chr14	105428994	105450533	+	386	21539	"intron (NM_138420, intron 1 of 6)"	"intron (NM_138420, intron 1 of 6)"	4931	NM_138420	113146	Hs.441783	NM_138420	ENSG00000185567	AHNAK2	C14orf78	AHNAK nucleoprotein 2	protein-coding	385.97	86.4	4.46724537	2.73E-96
chr14-90	chr14	103010040	103012761	+	84.5	2721	Intergenic	CpG	5419	NR_036192	100422954		NR_036192	ENSG00000266015	MIR4309	-	microRNA 4309	ncRNA	84.49	12.62	6.694928685	4.39E-32
chr14-908	chr14	105999182	106003037	+	60.2	3855	TTS (NR_135205)	TTS (NR_135205)	2917	NR_135205	105370697	Hs.148580	NR_135205		LOC105370697	-	uncharacterized LOC105370697	ncRNA	60.17	14.08	4.2734375	7.27E-16
chr14-909	chr14	106130329	106131581	+	20.5	1252	Intergenic	Intergenic	8189	NR_046211	2003	Hs.744419	NR_046211		ELK2AP	ELK2|ELK2.1|ELK2P1	"ELK2A, member of ETS oncogene family, pseudogene"	pseudo	20.48	0.97	21.11340206	2.68E-16
chr14-917	chr14	21443511	21444784	+	21.8	1273	Intergenic	AluSx1|SINE|Alu	-13818	NM_022734	64745	Hs.512693	NM_022734	ENSG00000165792	METTL17	METT11D1	methyltransferase like 17	protein-coding	21.76	3.4	6.4	3.73E-09
chr14-921	chr14	21768547	21769827	+	19.2	1280	"exon (NM_020366, exon 3 of 24)"	"exon (NM_020366, exon 3 of 24)"	13051	NM_020366	57096	Hs.126035	NM_020366	ENSG00000092200	RPGRIP1	CORD13|LCA6|RGI1|RGRIP|RPGRIP|RPGRIP1d	retinitis pigmentosa GTPase regulator interacting protein 1	protein-coding	19.2	2.43	7.901234568	1.91E-09
chr14-926	chr14	23352554	23353827	+	21.1	1273	"intron (NM_173527, intron 1 of 4)"	"intron (NM_173527, intron 1 of 4)"	758	NM_173527	161253	Hs.444911	NM_173527	ENSG00000139890	REM2	-	RRAD and GEM like GTPase 2	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr14-932	chr14	34529600	34530600	+	18.6	1000	Intergenic	Intergenic	-109816	NM_022073	112399	Hs.135507	NM_022073	ENSG00000129521	EGLN3	HIFP4H3|HIFPH3|PHD3	egl-9 family hypoxia inducible factor 3	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr14-936	chr14	49966927	49970175	+	44.8	3248	Intergenic	Intergenic	84583	NM_001032	6235	Hs.156367	NM_001032	ENSG00000213741	RPS29	DBA13|S29	ribosomal protein S29	protein-coding	44.81	7.77	5.767052767	6.82E-16
chr14-939	chr14	55295750	55296750	+	18.6	1000	Intergenic	Intergenic	48661	NR_036194	100422984		NR_036194	ENSG00000265432	MIR4308	-	microRNA 4308	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr14-943	chr14	62403331	62404331	+	18.6	1000	Intergenic	Intergenic	-58710	NM_031914	83851	Hs.404139	NM_031914	ENSG00000139973	SYT16	CHR14SYT|SYT14L|Strep14|syt14r|yt14r	synaptotagmin 16	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr14-950	chr14	70326587	70328153	+	24.3	1566	Intergenic	Intergenic	-18744	NM_001034852	64093	Hs.497349	NM_022137	ENSG00000198732	SMOC1	OAS	SPARC related modular calcium binding 1	protein-coding	24.32	3.4	7.152941176	7.55E-11
chr14-951	chr14	71107077	71110183	+	52.5	3106	promoter-TSS (NR_110071)	promoter-TSS (NR_110071)	126	NM_015351	23508	Hs.79170	NM_015351	ENSG00000133985	TTC9	TTC9A	tetratricopeptide repeat domain 9	protein-coding	52.49	4.85	10.82268041	3.99E-28
chr14-952	chr14	71287097	71288097	+	17.9	1000	Intergenic	AluJr4|SINE|Alu	-11709	NM_033141	4293	Hs.445496	NM_033141	ENSG00000006432	MAP3K9	MEKK9|MLK1|PRKE1	mitogen-activated protein kinase kinase kinase 9	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr14-953	chr14	73344404	73345668	+	23	1264	"intron (NM_012074, intron 1 of 9)"	"intron (NM_012074, intron 1 of 9)"	14321	NM_001280544	8110	Hs.162868	NM_012074	ENSG00000205683	DPF3	BAF45C|CERD4	double PHD fingers 3	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr14-954	chr14	73359270	73362343	+	58.2	3073	promoter-TSS (NM_001280542)	promoter-TSS (NM_001280542)	18	NM_001280542	8110	Hs.162868	NM_012074	ENSG00000205683	DPF3	BAF45C|CERD4	double PHD fingers 3	protein-coding	58.25	12.62	4.615689382	2.92E-16
chr14-958	chr14	74882880	74884140	+	21.8	1260	"intron (NM_001105579, intron 1 of 3)"	MIR|SINE|MIR	9295	NM_001105579	646658	Hs.12400	NM_001105579	ENSG00000183379	SYNDIG1L	CAPUCIN|DSPC1|IFITMD4|TMEM90A	synapse differentiation inducing 1 like	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr14-96	chr14	21536737	21539474	+	76.2	2737	promoter-TSS (NM_001278529)	promoter-TSS (NM_001278529)	-314	NM_018071	55701	Hs.35125	NM_018071	ENSG00000165801	ARHGEF40	SOLO	Rho guanine nucleotide exchange factor 40	protein-coding	76.17	13.11	5.81006865	1.24E-25
chr14-962	chr14	75838983	75840247	+	20.5	1264	Intergenic	AluSx|SINE|Alu	-54894	NM_001135047	122953	Hs.196482	NM_130469	ENSG00000140044	JDP2	JUNDM2	Jun dimerization protein 2	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr14-966	chr14	76939925	76940925	+	17.9	1000	"intron (NM_004452, intron 5 of 10)"	"intron (NM_004452, intron 5 of 10)"	102735	NM_004452	2103	Hs.435845	NM_004452	ENSG00000119715	ESRRB	DFNB35|ERR2|ERRb|ESRL2|NR3B2	estrogen related receptor beta	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr14-968	chr14	77227018	77230379	+	60.2	3361	"5' UTR (NM_014909, exon 1 of 7)"	"5' UTR (NM_014909, exon 1 of 7)"	463	NM_014909	22846	Hs.525479	NM_014909	ENSG00000071246	VASH1	KIAA1036	vasohibin 1	protein-coding	60.17	11.65	5.164806867	6.32E-19
chr14-972	chr14	91278430	91284228	+	72.3	5798	"intron (NM_001320421, intron 1 of 20)"	"intron (NM_001320421, intron 1 of 20)"	1432	NM_001010854	145567	Hs.655697	NM_001010854	ENSG00000165914	TTC7B	TTC7L1|c14_5685	tetratricopeptide repeat domain 7B	protein-coding	72.33	14.56	4.96771978	2.74E-21
chr14-973	chr14	92807326	92808326	+	19.2	1000	"intron (NM_153646, intron 2 of 16)"	"intron (NM_153646, intron 2 of 16)"	17674	NM_153646	123041	Hs.385530	NM_153646	ENSG00000140090	SLC24A4	AI2A5|NCKX4|SHEP6|SLC24A2	solute carrier family 24 member 4	protein-coding	19.2	1.46	13.15068493	1.82E-12
chr14-974	chr14	93042294	93043569	+	17.9	1275	"intron (NM_001319987, intron 1 of 8)"	MIRb|SINE|MIR	352	NM_001319987	79890	Hs.326822	NM_024832	ENSG00000100599	RIN3	-	Ras and Rab interactor 3	protein-coding	17.92	1.46	12.2739726	2.41E-11
chr14-977	chr14	94255572	94256839	+	19.2	1267	Intergenic	Intergenic	-1439	NM_178013	145270	Hs.432401	NM_178004	ENSG00000175785	PRIMA1	PRIMA	proline rich membrane anchor 1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr14-979	chr14	94503839	94505417	+	25	1578	"intron (NM_023112, intron 2 of 5)"	"intron (NM_023112, intron 2 of 5)"	11904	NM_023112	78990	Hs.278815	NM_023112	ENSG00000089723	OTUB2	C14orf137|OTB2|OTU2	"OTU deubiquitinase, ubiquitin aldehyde binding 2"	protein-coding	24.96	0.97	25.73195876	2.01E-20
chr14-981	chr14	96629557	96632141	+	37.8	2584	Intergenic	MLT1E2|LTR|ERVL-MaLR	-40286	NM_000623	624	Hs.654542	NM_000623	ENSG00000168398	BDKRB2	B2R|BK-2|BK2|BKR2|BRB2	bradykinin receptor B2	protein-coding	37.76	6.8	5.552941176	7.17E-13
chr14-983	chr14	99496787	99497787	+	19.2	1000	Intergenic	Intergenic	240763	NM_022898	64919	Hs.709690	NM_022898	ENSG00000127152	BCL11B	ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IMD49|RIT1|ZNF856B|hRIT1-alpha	B-cell CLL/lymphoma 11B	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr14-986	chr14	99778309	99779309	+	19.2	1000	Intergenic	MIRc|SINE|MIR	-40759	NM_001282237	64919	Hs.709690	NM_022898	ENSG00000127152	BCL11B	ATL1|ATL1-alpha|ATL1-beta|ATL1-delta|ATL1-gamma|CTIP-2|CTIP2|IMD49|RIT1|ZNF856B|hRIT1-alpha	B-cell CLL/lymphoma 11B	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr14-989	chr14	100090075	100091075	+	17.9	1000	"intron (NM_001329411, intron 1 of 8)"	"intron (NM_001329411, intron 1 of 8)"	19741	NM_001329411	84439	Hs.131714	NM_032425	ENSG00000182218	HHIPL1	KIAA1822|UNQ9245	HHIP like 1	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr14-990	chr14	100127694	100132714	+	81.9	5020	"intron (NM_001127258, intron 6 of 8)"	"intron (NM_001127258, intron 6 of 8)"	18757	NM_001127258	84439	Hs.131714	NM_032425	ENSG00000182218	HHIPL1	KIAA1822|UNQ9245	HHIP like 1	protein-coding	81.93	16.99	4.822248381	1.25E-23
chr14-998	chr14	100285398	100286398	+	18.6	1000	"intron (NM_001008707, intron 1 of 22)"	"intron (NM_001008707, intron 1 of 22)"	26153	NM_001008707	2009	Hs.12451	NM_004434	ENSG00000066629	EML1	BH|ELP79|EMAP|EMAPL|HuEMAP	echinoderm microtubule associated protein like 1	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr15-102	chr15	84034282	84035793	+	28.8	1511	Intergenic	L1MB8|LINE|L1	-80943	NM_001324186	6457	Hs.270055	NM_003027	ENSG00000140600	SH3GL3	CNSA3|EEN-B2|HsT19371|SH3D2C|SH3P13	"SH3 domain containing GRB2 like 3, endophilin A3"	protein-coding	28.8	5.82	4.948453608	3.50E-09
chr15-1022	chr15	25757303	25758303	+	15.4	1000	Intergenic	L1MC4a|LINE|L1	-73628	NM_130839	7337	Hs.598862	NM_000462	ENSG00000114062	UBE3A	ANCR|AS|E6-AP|EPVE6AP|HPVE6A	ubiquitin protein ligase E3A	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr15-1023	chr15	26059736	26060736	+	16	1000	"intron (NM_024490, intron 1 of 20)"	"intron (NM_024490, intron 1 of 20)"	33736	NR_039865	100616474		NR_039865	ENSG00000266517	MIR4715	-	microRNA 4715	ncRNA	16	0	16.4818808	1.26E-14
chr15-1024	chr15	27293324	27294324	+	14.1	1000	"intron (NM_033223, intron 3 of 9)"	"intron (NM_033223, intron 3 of 9)"	77395	NM_033223	2567	Hs.569475	NM_033223	ENSG00000182256	GABRG3	-	gamma-aminobutyric acid type A receptor gamma3 subunit	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr15-1027	chr15	29514664	29515664	+	15.4	1000	"intron (NM_015307, intron 3 of 10)"	"intron (NM_015307, intron 3 of 10)"	46856	NM_138704	56160	Hs.94011	NM_138704	ENSG00000185115	NSMCE3	HCA4|LICS|MAGEG1|MAGEL3|NDNL2|NSE3	"NSE3 homolog, SMC5-SMC6 complex component"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1029	chr15	30118717	30122164	+	61.4	3447	"intron (NM_001301025, intron 2 of 28)"	L1MC4a|LINE|L1	-5734	NM_003257	7082	Hs.743990	NM_003257	ENSG00000104067	TJP1	ZO-1	tight junction protein 1	protein-coding	61.45	13.11	4.687261632	1.12E-17
chr15-1031	chr15	31445231	31446231	+	16	1000	"intron (NM_001252020, intron 1 of 26)"	AluSx1|SINE|Alu	7745	NM_001252020	4308	Hs.155942	NM_002420	ENSG00000134160	TRPM1	CSNB1C|LTRPC1|MLSN1	transient receptor potential cation channel subfamily M member 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr15-1032	chr15	31501265	31502525	+	17.3	1260	Intergenic	L1MC5|LINE|L1	-6329	NR_135834	102725022	Hs.664541	NR_135834		LOC102725022	-	uncharacterized LOC102725022	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr15-1035	chr15	31878552	31879552	+	15.4	1000	"intron (NM_001329907, intron 4 of 10)"	L2a|LINE|L2	259994	NM_015995	51621	Hs.376443	NM_015995	ENSG00000169926	KLF13	BTEB3|FKLF2|NSLP1|RFLAT-1|RFLAT1	Kruppel like factor 13	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr15-1039	chr15	33283488	33284488	+	14.7	1000	"intron (NM_001103184, intron 3 of 16)"	"intron (NM_001103184, intron 3 of 16)"	76245	NM_001103184	342184	Hs.657649	NM_198500	ENSG00000248905	FMN1	FMN|LD	formin 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr15-1040	chr15	33607251	33608251	+	16	1000	"intron (NM_001243996, intron 1 of 102)"	"intron (NM_001243996, intron 1 of 102)"	4588	NM_001036	6263	Hs.709373	NM_001036	ENSG00000198838	RYR3	RYR-3	ryanodine receptor 3	protein-coding	16	3.4	4.705882353	2.25E-05
chr15-1042	chr15	33944594	33945594	+	16	1000	"intron (NM_001243996, intron 32 of 102)"	"intron (NM_001243996, intron 32 of 102)"	-315421	NM_001320917	1133	Hs.584747	NM_012125	ENSG00000184984	CHRM5	HM5	cholinergic receptor muscarinic 5	protein-coding	16	3.88	4.12371134	7.91E-05
chr15-1043	chr15	33983801	33985782	+	29.4	1981	"intron (NM_001243996, intron 38 of 102)"	"intron (NM_001243996, intron 38 of 102)"	-275724	NM_001320917	1133	Hs.584747	NM_012125	ENSG00000184984	CHRM5	HM5	cholinergic receptor muscarinic 5	protein-coding	29.44	3.88	7.587628866	2.58E-13
chr15-1044	chr15	34909307	34910307	+	16	1000	Intergenic	Intergenic	-34036	NR_027410	440270	Hs.720151	NM_001023567	ENSG00000215252	GOLGA8B	GOLGA5	golgin A8 family member B	protein-coding	16	2.91	5.498281787	4.98E-06
chr15-1046	chr15	36723788	36724788	+	16	1000	Intergenic	Intergenic	-147516	NM_001321756	84529	Hs.48348	NM_032499	ENSG00000186073	C15orf41	HH114	chromosome 15 open reading frame 41	protein-coding	16	2.91	5.498281787	4.98E-06
chr15-1052	chr15	39286308	39287308	+	16	1000	Intergenic	Intergenic	-256062	NR_144507	400360	Hs.376109	NM_207445		C15orf54	-	chromosome 15 open reading frame 54	ncRNA	16	2.43	6.58436214	7.90E-07
chr15-1059	chr15	39724609	39726293	+	25.6	1684	Intergenic	Intergenic	-147829	NM_003246	7057	Hs.164226	NM_003246	ENSG00000137801	THBS1	THBS|THBS-1|TSP|TSP-1|TSP1	thrombospondin 1	protein-coding	25.6	5.82	4.39862543	7.99E-08
chr15-1061	chr15	39767483	39768483	+	16.6	1000	Intergenic	L2a|LINE|L2	-105297	NM_003246	7057	Hs.164226	NM_003246	ENSG00000137801	THBS1	THBS|THBS-1|TSP|TSP-1|TSP1	thrombospondin 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr15-1072	chr15	40632240	40633240	+	15.4	1000	"intron (NM_207380, intron 1 of 10)"	"intron (NM_207380, intron 1 of 10)"	428	NM_207380	388115	Hs.32433	NM_207380	ENSG00000188549	C15orf52	-	chromosome 15 open reading frame 52	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr15-1075	chr15	41216868	41218728	+	33.9	1860	Intergenic	CpG	-3733	NM_019074	54567	Hs.511076	NM_019074	ENSG00000128917	DLL4	AOS6|hdelta2	delta like canonical Notch ligand 4	protein-coding	33.92	5.82	5.828178694	4.04E-12
chr15-1078	chr15	42160554	42165496	+	76.2	4942	"intron (NM_016642, intron 29 of 67)"	"intron (NM_016642, intron 29 of 67)"	-4276	NR_036195	100423013		NR_036195	ENSG00000264850	MIR4310	-	microRNA 4310	ncRNA	76.17	8.74	8.715102975	1.44E-34
chr15-1079	chr15	42173397	42174678	+	17.9	1281	"intron (NM_016642, intron 12 of 67)"	"intron (NM_016642, intron 12 of 67)"	-10938	NR_135681	105370792	Hs.627877	NR_135681		LOC105370792	-	uncharacterized LOC105370792	ncRNA	17.92	1.46	12.2739726	2.41E-11
chr15-1082	chr15	42283225	42284872	+	25.6	1647	"intron (NM_001206670, intron 13 of 19)"	"intron (NM_001206670, intron 13 of 19)"	19087	NR_120334	101928388	Hs.738043	NR_120334	ENSG00000246740	PLA2G4E-AS1	-	PLA2G4E antisense RNA 1	ncRNA	25.6	1.94	13.19587629	4.03E-16
chr15-1086	chr15	42379473	42380473	+	15.4	1000	"intron (NM_178034, intron 1 of 19)"	"intron (NM_178034, intron 1 of 19)"	6779	NM_178034	283748	Hs.380225	NM_178034	ENSG00000159337	PLA2G4D	cPLA2delta	phospholipase A2 group IVD	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1092	chr15	45795323	45796323	+	16	1000	"intron (NM_001321036, intron 3 of 3)"	AluSg|SINE|Alu	-7511	NR_022014	283651	Hs.574240	NM_173609		HMGN2P46	C15orf21|D-PCa-2	high mobility group nucleosomal binding domain 2 pseudogene 46	pseudo	16	1.46	10.95890411	3.44E-09
chr15-1093	chr15	45815344	45816344	+	16.6	1000	promoter-TSS (NM_013309)	promoter-TSS (NM_013309)	-842	NM_001321036	7782	Hs.162989	NM_013309	ENSG00000104154	SLC30A4	ZNT4|znT-4	solute carrier family 30 member 4	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr15-1094	chr15	45824712	45825991	+	17.9	1279	"intron (NR_022014, intron 3 of 5)"	MER41A|LTR|ERV1	-10349	NM_001321036	7782	Hs.162989	NM_013309	ENSG00000104154	SLC30A4	ZNT4|znT-4	solute carrier family 30 member 4	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr15-1096	chr15	48055026	48056026	+	16	1000	"intron (NM_153617, intron 9 of 17)"	"intron (NM_153617, intron 9 of 17)"	44840	NM_153618	80031	Hs.511265	NM_020858	ENSG00000137872	SEMA6D	-	semaphorin 6D	protein-coding	16	1.46	10.95890411	3.44E-09
chr15-1097	chr15	50473281	50474281	+	16	1000	promoter-TSS (NM_001159629)	promoter-TSS (NM_001159629)	-612	NM_001159629	11001	Hs.11729	NM_003645	ENSG00000140284	SLC27A2	ACSVL1|FACVL1|FATP2|HsT17226|VLACS|VLCS|hFACVL1	solute carrier family 27 member 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr15-1098	chr15	52568435	52569435	+	16	1000	TTS (NR_031670)	TTS (NR_031670)	462	NR_031670	100302202		NR_031670	ENSG00000221052	MIR1266	MIRN1266|hsa-mir-1266|mir-1266	microRNA 1266	ncRNA	16	3.88	4.12371134	7.91E-05
chr15-1103	chr15	53101219	53102219	+	16.6	1000	Intergenic	Intergenic	-19510	NM_004498	3175	Hs.658573	NM_004498	ENSG00000169856	ONECUT1	HNF-6|HNF6|HNF6A	one cut homeobox 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr15-1104	chr15	53405978	53406978	+	16	1000	Intergenic	Intergenic	-324269	NM_004498	3175	Hs.658573	NM_004498	ENSG00000169856	ONECUT1	HNF-6|HNF6|HNF6A	one cut homeobox 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr15-1105	chr15	53637974	53638974	+	16.6	1000	Intergenic	Intergenic	194575	NR_102336	256764	Hs.122125	NM_182758	ENSG00000166415	WDR72	AI2A3	WD repeat domain 72	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr15-1109	chr15	57836434	57837434	+	16.6	1000	"intron (NM_001252335, intron 17 of 19)"	MIRc|SINE|MIR	-47168	NR_104368	145781	Hs.437256	NM_001018090	ENSG00000137878	GCOM1	GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom	GRINL1A complex locus 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr15-1114	chr15	58166640	58167640	+	16	1000	Intergenic	L1M3f|LINE|L1	139155	NM_170697	8854	Hs.643455	NM_003888	ENSG00000128918	ALDH1A2	RALDH(II)|RALDH2|RALDH2-T	aldehyde dehydrogenase 1 family member A2	protein-coding	16	3.88	4.12371134	7.91E-05
chr15-1115	chr15	58207355	58208787	+	22.4	1432	Intergenic	MIR3|SINE|MIR	98224	NM_170697	8854	Hs.643455	NM_003888	ENSG00000128918	ALDH1A2	RALDH(II)|RALDH2|RALDH2-T	aldehyde dehydrogenase 1 family member A2	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr15-112	chr15	33935484	33937770	+	44.8	2286	"exon (NM_001036, exon 28 of 104)"	"exon (NM_001036, exon 28 of 104)"	-323888	NM_001320917	1133	Hs.584747	NM_012125	ENSG00000184984	CHRM5	HM5	cholinergic receptor muscarinic 5	protein-coding	44.81	6.8	6.589705882	1.33E-17
chr15-1120	chr15	59605535	59606535	+	16	1000	"intron (NM_004998, intron 1 of 27)"	"intron (NM_004998, intron 1 of 27)"	59036	NM_004998	4643	Hs.654506	NM_004998	ENSG00000157483	MYO1E	FSGS6|HuncM-IC|MYO1C	myosin IE	protein-coding	16	1.94	8.24742268	7.67E-08
chr15-1122	chr15	60866865	60867865	+	14.7	1000	"intron (NM_134260, intron 1 of 11)"	"intron (NM_134260, intron 1 of 11)"	17342	NM_134262	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr15-1125	chr15	60901168	60902424	+	19.8	1256	"intron (NR_120342, intron 5 of 5)"	"intron (NR_120342, intron 5 of 5)"	-17089	NM_134262	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr15-1127	chr15	61012463	61013463	+	16.6	1000	"intron (NM_134261, intron 1 of 10)"	"intron (NM_134261, intron 1 of 10)"	39195	NR_120318	100996876	Hs.511626	NR_120318		RORA-AS2	-	RORA antisense RNA 2	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr15-1130	chr15	62455591	62457063	+	18.6	1472	"exon (NM_001007595, exon 2 of 2)"	"exon (NM_001007595, exon 2 of 2)"	1155	NM_001007595	388125	Hs.144372	NM_001007595	ENSG00000205502	C2CD4B	FAM148B|NLF2	C2 calcium dependent domain containing 4B	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr15-1134	chr15	62890212	62891212	+	16.6	1000	Intergenic	Intergenic	46668	NR_026897	197003	Hs.352253	NM_152648	ENSG00000259458	MGC15885	-	uncharacterized protein MGC15885	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr15-1136	chr15	63147529	63149383	+	28.2	1854	Intergenic	MIRb|SINE|MIR	32300	NR_029709	406965		NR_029709	ENSG00000211137	MIR190A	MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a	microRNA 190a	ncRNA	28.16	0.97	29.03092784	9.47E-25
chr15-1138	chr15	63226205	63228448	+	35.8	2243	Intergenic	L2a|LINE|L2	-107512	NM_001018006	7168	Hs.133892	NM_000366	ENSG00000140416	TPM1	C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA	tropomyosin 1 (alpha)	protein-coding	35.84	6.31	5.679873217	7.13E-13
chr15-1139	chr15	63300190	63301190	+	16	1000	Intergenic	LTR33|LTR|ERVL	-34148	NM_001018006	7168	Hs.133892	NM_000366	ENSG00000140416	TPM1	C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA	tropomyosin 1 (alpha)	protein-coding	16	2.43	6.58436214	7.90E-07
chr15-1143	chr15	63684156	63685156	+	15.4	1000	"intron (NR_120375, intron 1 of 6)"	"intron (NR_120375, intron 1 of 6)"	2227	NR_120375	102723344	Hs.569500	NR_120375		LOC102723344	-	uncharacterized LOC102723344	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr15-1144	chr15	63704577	63705577	+	16.6	1000	"intron (NR_120375, intron 4 of 6)"	MER115|DNA|hAT-Tip100	22648	NR_120375	102723344	Hs.569500	NR_120375		LOC102723344	-	uncharacterized LOC102723344	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr15-1147	chr15	64444799	64445799	+	16	1000	"intron (NR_073534, intron 3 of 6)"	MER45A|DNA|hAT-Tip100	1383	NR_073534	79856	Hs.744250	NM_024798	ENSG00000157734	SNX22	-	sorting nexin 22	protein-coding	16	2.91	5.498281787	4.98E-06
chr15-1150	chr15	66274860	66276197	+	19.2	1337	"intron (NM_032445, intron 5 of 22)"	"intron (NM_032445, intron 5 of 22)"	-57043	NR_036196	100422905		NR_036196	ENSG00000263512	MIR4311	-	microRNA 4311	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr15-1151	chr15	66319484	66320484	+	13.4	1000	"intron (NM_032445, intron 5 of 22)"	MER5A|DNA|hAT-Charlie	-12587	NR_036196	100422905		NR_036196	ENSG00000263512	MIR4311	-	microRNA 4311	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr15-1156	chr15	66425434	66426434	+	14.7	1000	"intron (NM_032445, intron 1 of 22)"	"intron (NM_032445, intron 1 of 22)"	93363	NR_036196	100422905		NR_036196	ENSG00000263512	MIR4311	-	microRNA 4311	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr15-1157	chr15	66441447	66442447	+	15.4	1000	"intron (NM_032445, intron 1 of 22)"	"intron (NM_032445, intron 1 of 22)"	104128	NM_032445	84465	Hs.712886	NM_032445	ENSG00000157890	MEGF11	-	multiple EGF like domains 11	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1159	chr15	66473176	66474686	+	22.4	1510	"intron (NM_032445, intron 1 of 22)"	Charlie18a|DNA|hAT-Charlie	72144	NM_032445	84465	Hs.712886	NM_032445	ENSG00000157890	MEGF11	-	multiple EGF like domains 11	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr15-1162	chr15	67175884	67176884	+	14.7	1000	Intergenic	Intergenic	72469	NR_135687	102723481	Hs.512978	NR_135687	ENSG00000259289	LOC102723481	-	uncharacterized LOC102723481	ncRNA	14.72	0	15.16333034	3.99E-13
chr15-1163	chr15	67269041	67270772	+	27.5	1731	Intergenic	ERVL-E-int|LTR|ERVL	-21053	NR_135687	102723481	Hs.512978	NR_135687	ENSG00000259289	LOC102723481	-	uncharacterized LOC102723481	ncRNA	27.52	3.88	7.092783505	1.44E-11
chr15-1164	chr15	67412927	67413927	+	16.6	1000	"intron (NM_005902, intron 1 of 8)"	"intron (NM_005902, intron 1 of 8)"	-4627	NM_001145102	4088	Hs.727986	NM_005902	ENSG00000166949	SMAD3	HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3	SMAD family member 3	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr15-1165	chr15	68157601	68158851	+	19.2	1250	Intergenic	L1ME4a|LINE|L1	-25843	NR_125730	103625684		NR_125730	ENSG00000207357	RNU6-2	U6-2	"RNA, U6 small nuclear 2"	snRNA	19.2	1.94	9.896907216	9.57E-11
chr15-1172	chr15	69134319	69135319	+	16	1000	"intron (NR_031680, intron 2 of 4)"	AluSx1|SINE|Alu	18516	NR_031680	100313884		NR_031680	ENSG00000221616	MIR548H4	MIR548H-4|MIRN548H4|hsa-mir-548h-4	microRNA 548h-4	ncRNA	16	2.91	5.498281787	4.98E-06
chr15-1175	chr15	69311050	69312500	+	22.4	1450	"intron (NM_024505, intron 1 of 15)"	L1MD1|LINE|L1	4741	NM_001184779	79400	Hs.657932	NM_024505	ENSG00000255346	NOX5	-	NADPH oxidase 5	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr15-1176	chr15	69378634	69380246	+	23.7	1612	"intron (NR_026949, intron 1 of 3)"	"intron (NR_026949, intron 1 of 3)"	6250	NR_026949	283673	Hs.177927	NM_173610	ENSG00000212766	EWSAT1	LINC00277|NCRNA00277|TMEM84	Ewing sarcoma associated transcript 1	ncRNA	23.68	3.4	6.964705882	5.45E-10
chr15-1178	chr15	69609379	69611240	+	30.1	1861	"intron (NM_001104554, intron 1 of 8)"	"intron (NM_001104554, intron 1 of 8)"	3567	NM_001104554	54852	Hs.591096	NM_017705	ENSG00000137819	PAQR5	MPRG	progestin and adipoQ receptor family member 5	protein-coding	30.08	4.85	6.202061856	2.13E-11
chr15-1179	chr15	69831711	69832711	+	15.4	1000	Intergenic	MER81|DNA|hAT-Blackjack	-21848	NR_026979	145837	Hs.410126	NR_026979		DRAIC	-	"downregulated RNA in cancer, inhibitor of cell invasion and migration"	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr15-118	chr15	61325185	61326682	+	32.6	1497	"intron (NM_134261, intron 1 of 10)"	MER33|DNA|hAT-Charlie	195569	NM_134261	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	32.64	4.37	7.469107551	5.18E-14
chr15-1181	chr15	69984105	69985105	+	16	1000	"intron (NR_126437, intron 5 of 5)"	"intron (NR_126437, intron 5 of 5)"	100066	NR_126437	104472713	Hs.430824	NR_126437	ENSG00000259641	PCAT29	-	prostate cancer associated transcript 29 (non-protein coding)	ncRNA	16	3.88	4.12371134	7.91E-05
chr15-1182	chr15	70127343	70128343	+	16	1000	"intron (NR_026764, intron 1 of 4)"	MIR|SINE|MIR	270	NR_026764	414926	Hs.569502	NR_026764	ENSG00000259703	LINC00593	C15orf50	long intergenic non-protein coding RNA 593	ncRNA	16	2.91	5.498281787	4.98E-06
chr15-1184	chr15	70393643	70394643	+	15.4	1000	Intergenic	Intergenic	-3887	NM_001105192	7090	Hs.287362	NM_005078	ENSG00000140332	TLE3	ESG|ESG3|GRG3|HsT18976	transducin like enhancer of split 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1185	chr15	70464576	70465576	+	16	1000	Intergenic	L1M5|LINE|L1	-74820	NM_001105192	7090	Hs.287362	NM_005078	ENSG00000140332	TLE3	ESG|ESG3|GRG3|HsT18976	transducin like enhancer of split 3	protein-coding	16	2.43	6.58436214	7.90E-07
chr15-1188	chr15	72006323	72007323	+	16	1000	"intron (NM_001286429, intron 2 of 11)"	"intron (NM_001286429, intron 2 of 11)"	-22945	NR_120346	101929173	Hs.680593	NR_120346		THSD4-AS2	-	THSD4 antisense RNA 2	ncRNA	16	3.88	4.12371134	7.91E-05
chr15-1191	chr15	74045636	74046636	+	15.4	1000	Intergenic	Intergenic	-1425	NM_001303254	388135	Hs.40794	NM_001039614	ENSG00000205363	C15orf59	INSYN1	chromosome 15 open reading frame 59	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr15-1194	chr15	74119989	74121327	+	21.8	1338	Intergenic	L2c|LINE|L2	-45269	NM_153356	161514	Hs.124512	NM_153356	ENSG00000167139	TBC1D21	MgcRabGAP	TBC1 domain family member 21	protein-coding	21.76	5.34	4.074906367	1.97E-06
chr15-1195	chr15	74138590	74139590	+	16.6	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	-26837	NM_153356	161514	Hs.124512	NM_153356	ENSG00000167139	TBC1D21	MgcRabGAP	TBC1 domain family member 21	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr15-1196	chr15	74194621	74196161	+	23.7	1540	Intergenic	Intergenic	-23408	NM_005576	4016	Hs.65436	NM_005576	ENSG00000129038	LOXL1	LOL|LOXL	lysyl oxidase like 1	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr15-1198	chr15	74213729	74215354	+	24.3	1625	"intron (NR_040069, intron 1 of 2)"	"intron (NR_040069, intron 1 of 2)"	-4258	NM_005576	4016	Hs.65436	NM_005576	ENSG00000129038	LOXL1	LOL|LOXL	lysyl oxidase like 1	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr15-1200	chr15	74624511	74625511	+	16	1000	"intron (NM_182791, intron 5 of 8)"	"intron (NM_182791, intron 5 of 8)"	14129	NM_001287181	80125	Hs.383206	NM_025055	ENSG00000140481	CCDC33	CT61|HP11097	coiled-coil domain containing 33	protein-coding	16	3.88	4.12371134	7.91E-05
chr15-1201	chr15	74631449	74632449	+	16	1000	"exon (NM_001099773, exon 6 of 9)"	"exon (NM_001099773, exon 6 of 9)"	21067	NM_001287181	80125	Hs.383206	NM_025055	ENSG00000140481	CCDC33	CT61|HP11097	coiled-coil domain containing 33	protein-coding	16	3.4	4.705882353	2.25E-05
chr15-1205	chr15	75023805	75027011	+	53.8	3206	Intergenic	Intergenic	-7457	NM_000499	1543	Hs.72912	NM_000499	ENSG00000140465	CYP1A1	AHH|AHRR|CP11|CYP1|CYPIA1|P1-450|P450-C|P450DX	cytochrome P450 family 1 subfamily A member 1	protein-coding	53.77	10.19	5.276741904	2.12E-17
chr15-121	chr15	74421394	74424502	+	47.4	3108	"5' UTR (NM_020851, exon 1 of 3)"	"5' UTR (NM_020851, exon 1 of 3)"	205	NM_020851	57611	Hs.254775	NM_020851	ENSG00000167178	ISLR2	LINX	immunoglobulin superfamily containing leucine rich repeat 2	protein-coding	47.37	7.77	6.096525097	1.86E-17
chr15-1210	chr15	75042210	75043210	+	16.6	1000	"exon (NM_000761, exon 2 of 7)"	"exon (NM_000761, exon 2 of 7)"	1526	NM_000761	1544	Hs.1361	NM_000761	ENSG00000140505	CYP1A2	CP12|P3-450|P450(PA)	cytochrome P450 family 1 subfamily A member 2	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr15-1211	chr15	75239792	75240792	+	16	1000	Intergenic	U2|snRNA|snRNA	9483	NM_017793	54913	Hs.8562	NM_017793	ENSG00000178718	RPP25	-	ribonuclease P/MRP subunit p25	protein-coding	16	3.4	4.705882353	2.25E-05
chr15-122	chr15	78026194	78027454	+	23	1260	"intron (NM_001301192, intron 2 of 4)"	"intron (NM_001301192, intron 2 of 4)"	-13731	NM_001301197	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding	23.04	1.46	15.78082192	5.41E-16
chr15-1223	chr15	78102115	78103115	+	16.6	1000	"intron (NM_001301186, intron 1 of 5)"	(CA)n|Simple_repeat|Simple_repeat	9251	NM_001301194	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr15-1230	chr15	78505765	78507303	+	22.4	1538	"intron (NM_015162, intron 1 of 13)"	"intron (NM_015162, intron 1 of 13)"	20515	NM_001199377	23205	Hs.655760	NM_015162	ENSG00000103740	ACSBG1	BG|BG1|BGM|GR-LACS|LPD	acyl-CoA synthetase bubblegum family member 1	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr15-1232	chr15	78524468	78526179	+	26.2	1711	"intron (NM_015162, intron 1 of 13)"	"intron (NM_015162, intron 1 of 13)"	1726	NM_001199377	23205	Hs.655760	NM_015162	ENSG00000103740	ACSBG1	BG|BG1|BGM|GR-LACS|LPD	acyl-CoA synthetase bubblegum family member 1	protein-coding	26.24	5.82	4.508591065	7.99E-08
chr15-1237	chr15	78638029	78639029	+	16	1000	"intron (NM_004378, intron 3 of 3)"	"intron (NM_004378, intron 3 of 3)"	5863	NM_004378	1381	Hs.346950	NM_004378	ENSG00000166426	CRABP1	CRABP|CRABP-I|CRABPI|RBP5	cellular retinoic acid binding protein 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr15-1238	chr15	78649426	78650426	+	16	1000	Intergenic	L1MC5|LINE|L1	17260	NM_004378	1381	Hs.346950	NM_004378	ENSG00000166426	CRABP1	CRABP|CRABP-I|CRABPI|RBP5	cellular retinoic acid binding protein 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr15-1241	chr15	78965847	78966847	+	16.6	1000	Intergenic	MER5B|DNA|hAT-Charlie	-32760	NM_001256567	1143	Hs.624178	NM_000750	ENSG00000117971	CHRNB4	-	cholinergic receptor nicotinic beta 4 subunit	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr15-1243	chr15	79254356	79255356	+	16.6	1000	"intron (NM_002891, intron 27 of 27)"	L1ME2z|LINE|L1	-17416	NM_001319137	1512	Hs.148641	NM_004390	ENSG00000103811	CTSH	ACC-4|ACC-5|ACC4|ACC5|CPSB	cathepsin H	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr15-1247	chr15	80719777	80720777	+	16.6	1000	"intron (NM_014862, intron 1 of 18)"	"intron (NM_014862, intron 1 of 18)"	23585	NM_014862	9915	Hs.459070	NM_014862	ENSG00000172379	ARNT2	WEDAS|bHLHe1	aryl hydrocarbon receptor nuclear translocator 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr15-1248	chr15	80742424	80743765	+	20.5	1341	"intron (NM_014862, intron 1 of 18)"	MIRc|SINE|MIR	46402	NM_014862	9915	Hs.459070	NM_014862	ENSG00000172379	ARNT2	WEDAS|bHLHe1	aryl hydrocarbon receptor nuclear translocator 2	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr15-1250	chr15	81187420	81188420	+	14.7	1000	"intron (NM_018689, intron 10 of 28)"	"intron (NM_018689, intron 10 of 28)"	-53506	NR_030393	693132		NR_030393	ENSG00000208003	MIR549A	MIR549|MIRN549|hsa-mir-549|hsa-mir-549a|mir-549a	microRNA 549a	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr15-1251	chr15	81735508	81736508	+	16.6	1000	TTS (NR_120365)	TTS (NR_120365)	-69590	NM_001080532	342125	Hs.253489	NM_001080532	ENSG00000188869	TMC3	-	transmembrane channel like 3	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr15-1256	chr15	84071733	84072733	+	16.6	1000	Intergenic	MER20|DNA|hAT-Charlie	-43747	NM_001324186	6457	Hs.270055	NM_003027	ENSG00000140600	SH3GL3	CNSA3|EEN-B2|HsT19371|SH3D2C|SH3P13	"SH3 domain containing GRB2 like 3, endophilin A3"	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr15-1258	chr15	86433413	86434413	+	16	1000	Intergenic	Intergenic	65047	NR_049805	100847084		NR_049805	ENSG00000264406	MIR548AP	-	microRNA 548ap	ncRNA	16	3.88	4.12371134	7.91E-05
chr15-1264	chr15	89388396	89390721	+	38.4	2325	"intron (NM_013227, intron 7 of 17)"	MER58B|DNA|hAT-Charlie	42884	NM_013227	176	Hs.2159	NM_001135	ENSG00000157766	ACAN	AGC1|AGCAN|CSPG1|CSPGCP|MSK16|SEDK	aggrecan	protein-coding	38.4	6.8	5.647058824	1.26E-13
chr15-1265	chr15	89553749	89554749	+	16	1000	Intergenic	MLT1G1|LTR|ERVL-MaLR	-77132	NM_007011	11057	Hs.122337	NM_007011	ENSG00000140526	ABHD2	HS1-2|LABH2|PHPS1-2	abhydrolase domain containing 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr15-1269	chr15	90069880	90070880	+	16	1000	Intergenic	Intergenic	-3115	NR_027075	283761	Hs.459288	NR_027074		LINC00928	-	long intergenic non-protein coding RNA 928	ncRNA	16	0	16.4818808	1.26E-14
chr15-127	chr15	93159514	93160514	+	21.8	1000	TTS (NM_207446)	TTS (NM_207446)	39017	NM_207446	400451	Hs.27373	NM_207446	ENSG00000185442	FAM174B	-	family with sequence similarity 174 member B	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr15-1270	chr15	90286619	90287619	+	16	1000	TTS (NM_020212)	TTS (NM_020212)	7421	NM_018670	55897	Hs.447531	NM_018670	ENSG00000166823	MESP1	bHLHc5	mesoderm posterior bHLH transcription factor 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr15-1271	chr15	90452783	90453783	+	16.6	1000	"intron (NM_001199058, intron 2 of 9)"	"intron (NM_001199058, intron 2 of 9)"	2636	NM_001282380	348110	Hs.6734	NM_182616	ENSG00000242498	ARPIN	C15orf38	actin-related protein 2/3 complex inhibitor	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr15-1273	chr15	91061663	91062663	+	16	1000	Intergenic	LTR40c|LTR|ERVL	-10955	NM_001042574	64784	Hs.567572	NM_022769	ENSG00000140577	CRTC3	TORC-3|TORC3	CREB regulated transcription coactivator 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr15-1276	chr15	91659082	91660374	+	23	1292	"intron (NM_001323039, intron 1 of 12)"	"intron (NM_001323039, intron 1 of 12)"	14842	NM_001323040	9899	Hs.21754	NM_014848	ENSG00000185518	SV2B	HsT19680	synaptic vesicle glycoprotein 2B	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr15-1278	chr15	91714175	91715175	+	16.6	1000	"intron (NM_001323040, intron 2 of 12)"	"intron (NM_001323040, intron 2 of 12)"	69789	NM_001323040	9899	Hs.21754	NM_014848	ENSG00000185518	SV2B	HsT19680	synaptic vesicle glycoprotein 2B	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr15-128	chr15	93198162	93200450	+	42.9	2288	promoter-TSS (NM_207446)	promoter-TSS (NM_207446)	-275	NM_207446	400451	Hs.27373	NM_207446	ENSG00000185442	FAM174B	-	family with sequence similarity 174 member B	protein-coding	42.89	4.85	8.843298969	3.69E-20
chr15-1283	chr15	92952120	92953120	+	15.4	1000	"intron (NM_001330416, intron 1 of 4)"	"intron (NM_001330416, intron 1 of 4)"	15480	NM_006011	8128	Hs.302341	NM_006011	ENSG00000140557	ST8SIA2	HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX	"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2"	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr15-1289	chr15	96001295	96002577	+	19.2	1282	"intron (NR_027133, intron 3 of 5)"	"intron (NR_027133, intron 3 of 5)"	25614	NR_027132	145820	Hs.652702	NR_027132	ENSG00000259134	LINC00924	-	long intergenic non-protein coding RNA 924	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr15-129	chr15	20481246	20482502	+	27.5	1256	Intergenic	Intergenic	-6123	NR_038836	646096	Hs.448789	NR_038836	ENSG00000259156	CHEK2P2	-	checkpoint kinase 2 pseudogene 2	pseudo	27.52	6.31	4.36133122	6.42E-08
chr15-1290	chr15	96142889	96143889	+	16.6	1000	Intergenic	Intergenic	167067	NR_027132	145820	Hs.652702	NR_027132	ENSG00000259134	LINC00924	-	long intergenic non-protein coding RNA 924	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr15-1292	chr15	96535340	96536340	+	15.4	1000	Intergenic	L2a|LINE|L2	-333317	NM_001145155	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr15-1293	chr15	96538114	96539364	+	17.9	1250	Intergenic	Intergenic	-330418	NM_001145155	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr15-1298	chr15	96886136	96887136	+	16.6	1000	Intergenic	Intergenic	10067	NM_001145157	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	16.64	0.49	33.95918367	3.68E-16
chr15-1300	chr15	97336085	97337085	+	16	1000	Intergenic	Intergenic	9948	NM_001304804	145946	Hs.326528	NM_173499	ENSG00000185594	SPATA8	SRG8	spermatogenesis associated 8	protein-coding	16	2.43	6.58436214	7.90E-07
chr15-1301	chr15	98292126	98295724	+	50.6	3598	"intron (NR_024173, intron 1 of 1)"	"intron (NR_024173, intron 1 of 1)"	123734	NR_024172	91948	Hs.130423	NR_024172	ENSG00000251209	LINC00923	-	long intergenic non-protein coding RNA 923	ncRNA	50.57	6.31	8.014263074	4.21E-22
chr15-1303	chr15	98965400	98966400	+	15.4	1000	Intergenic	Intergenic	91711	NM_182562	283777	Hs.668070	NM_182562	ENSG00000185087	FAM169B	-	family with sequence similarity 169 member B	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr15-1304	chr15	99181630	99182630	+	16.6	1000	Intergenic	AluSx1|SINE|Alu	-9638	NM_000875	3480	Hs.643120	NM_000875	ENSG00000140443	IGF1R	CD221|IGFIR|IGFR|JTK13	insulin like growth factor 1 receptor	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr15-1307	chr15	99360761	99361761	+	16.6	1000	"intron (NM_000875, intron 2 of 20)"	MLT1A|LTR|ERVL-MaLR	33606	NR_039864	100616432		NR_039864	ENSG00000264480	MIR4714	-	microRNA 4714	ncRNA	16.64	1.46	11.39726027	2.99E-10
chr15-1308	chr15	99531244	99532672	+	19.2	1428	"intron (NM_001167902, intron 2 of 4)"	L1PA7|LINE|L1	16927	NM_001102612	145814	Hs.592021	NM_001102612	ENSG00000183571	PGPEP1L	-	pyroglutamyl-peptidase I-like	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr15-1309	chr15	99575733	99576733	+	15.4	1000	Intergenic	LTR16C|LTR|ERVL	18300	NR_126487	104564224	Hs.32769	NR_126487		LUNAR1	-	leukemia-associated non-coding IGF1R activator RNA 1	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr15-1310	chr15	99605341	99606341	+	16.6	1000	Intergenic	Intergenic	-39445	NM_015286	23336	Hs.207106	NM_015286	ENSG00000182253	SYNM	DMN|SYN	synemin	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr15-1311	chr15	99642303	99643303	+	16.6	1000	Intergenic	Intergenic	-2483	NM_015286	23336	Hs.207106	NM_015286	ENSG00000182253	SYNM	DMN|SYN	synemin	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr15-1314	chr15	101266058	101267058	+	15.4	1000	Intergenic	Intergenic	123803	NM_198243	140460	Hs.31845	NM_024708	ENSG00000183475	ASB7	-	ankyrin repeat and SOCS box containing 7	protein-coding	15.36	0	15.82260557	1.26E-14
chr15-1315	chr15	101382152	101383152	+	15.4	1000	Intergenic	MIR|SINE|MIR	-37245	NM_000693	220	Hs.459538	NM_000693	ENSG00000184254	ALDH1A3	ALDH1A6|ALDH6|MCOP8|RALDH3	aldehyde dehydrogenase 1 family member A3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr15-1316	chr15	101426317	101427874	+	17.9	1557	"intron (NM_000693, intron 2 of 12)"	"intron (NM_000693, intron 2 of 12)"	7198	NM_001293815	220	Hs.459538	NM_000693	ENSG00000184254	ALDH1A3	ALDH1A6|ALDH6|MCOP8|RALDH3	aldehyde dehydrogenase 1 family member A3	protein-coding	17.92	1.46	12.2739726	2.41E-11
chr15-1317	chr15	101593112	101598033	+	74.2	4921	"intron (NM_024652, intron 27 of 33)"	"intron (NM_024652, intron 27 of 33)"	-136084	NR_135828	101927751	Hs.659224	NR_135827	ENSG00000259583	LOC101927751	-	uncharacterized LOC101927751	ncRNA	74.25	13.59	5.463576159	4.08E-24
chr15-1318	chr15	101636999	101637999	+	16.6	1000	Intergenic	MER1A|DNA|hAT-Charlie	154638	NM_014918	22856	Hs.110488	NM_014918	ENSG00000131873	CHSY1	CHSY|CSS1|ChSy-1|TPBS	chondroitin sulfate synthase 1	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr15-1327	chr15	20457436	20458436	+	15.4	1000	Intergenic	L1MB3|LINE|L1	-30061	NR_038836	646096	Hs.448789	NR_038836	ENSG00000259156	CHEK2P2	-	checkpoint kinase 2 pseudogene 2	pseudo	15.36	2.91	5.278350515	4.98E-06
chr15-134	chr15	59622963	59623963	+	21.1	1000	"intron (NM_004998, intron 1 of 27)"	"intron (NM_004998, intron 1 of 27)"	41608	NM_004998	4643	Hs.654506	NM_004998	ENSG00000157483	MYO1E	FSGS6|HuncM-IC|MYO1C	myosin IE	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr15-1351	chr15	22538632	22539632	+	16	1000	Intergenic	MIRc|SINE|MIR	-7433	NR_033735	646396	Hs.451294	NR_033735		REREP3	-	arginine-glutamic acid dipeptide repeats pseudogene 3	pseudo	16	1.94	8.24742268	7.67E-08
chr15-1356	chr15	22787584	22788584	+	15.4	1000	Intergenic	L2c|LINE|L2	-45311	NM_052903	114791	Hs.533898	NM_052903	ENSG00000275835	TUBGCP5	GCP5	tubulin gamma complex associated protein 5	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr15-1357	chr15	23905539	23907308	+	28.2	1769	Intergenic	L1ME2|LINE|L1	-13430	NM_019066	54551	Hs.141496	NM_019066	ENSG00000254585	MAGEL2	NDNL1|PWLS|SHFYNG|nM15	MAGE family member L2	protein-coding	28.16	5.82	4.838487973	3.50E-09
chr15-1359	chr15	27119130	27120130	+	15.4	1000	"intron (NM_001165037, intron 3 of 10)"	"intron (NM_001165037, intron 3 of 10)"	7357	NM_001165037	2558	Hs.24969	NM_000810	ENSG00000186297	GABRA5	-	gamma-aminobutyric acid type A receptor alpha5 subunit	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr15-1360	chr15	27226310	27227310	+	16	1000	"intron (NM_033223, intron 2 of 9)"	"intron (NM_033223, intron 2 of 9)"	10381	NM_033223	2567	Hs.569475	NM_033223	ENSG00000182256	GABRG3	-	gamma-aminobutyric acid type A receptor gamma3 subunit	protein-coding	16	1.94	8.24742268	7.67E-08
chr15-1371	chr15	30127515	30128515	+	15.4	1000	"intron (NM_001301025, intron 2 of 28)"	"intron (NM_001301025, intron 2 of 28)"	-13309	NM_003257	7082	Hs.743990	NM_003257	ENSG00000104067	TJP1	ZO-1	tight junction protein 1	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr15-1372	chr15	30174706	30176282	+	25.6	1576	"intron (NM_001301025, intron 2 of 28)"	"intron (NM_001301025, intron 2 of 28)"	-60788	NM_003257	7082	Hs.743990	NM_003257	ENSG00000104067	TJP1	ZO-1	tight junction protein 1	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr15-1374	chr15	31438691	31439691	+	15.4	1000	"intron (NM_001252020, intron 1 of 26)"	AluSp|SINE|Alu	14285	NM_001252020	4308	Hs.155942	NM_002420	ENSG00000134160	TRPM1	CSNB1C|LTRPC1|MLSN1	transient receptor potential cation channel subfamily M member 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1376	chr15	31852865	31853865	+	16	1000	"intron (NM_001329907, intron 5 of 10)"	"intron (NM_001329907, intron 5 of 10)"	234307	NM_015995	51621	Hs.376443	NM_015995	ENSG00000169926	KLF13	BTEB3|FKLF2|NSLP1|RFLAT-1|RFLAT1	Kruppel like factor 13	protein-coding	16	3.88	4.12371134	7.91E-05
chr15-1378	chr15	32443761	32445134	+	17.9	1373	"intron (NM_000746, intron 4 of 9)"	AluSg|SINE|Alu	121761	NR_046324	1139	Hs.511772	NM_000746	ENSG00000175344	CHRNA7	CHRNA7-2|NACHRA7	cholinergic receptor nicotinic alpha 7 subunit	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr15-1379	chr15	33115432	33116432	+	14.7	1000	"intron (NM_001103184, intron 13 of 16)"	"intron (NM_001103184, intron 13 of 16)"	-104866	NR_109767	100131315	Hs.610545	NR_109767	ENSG00000259721	LOC100131315	-	uncharacterized LOC100131315	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr15-138	chr15	77860385	77861705	+	27.5	1320	Intergenic	L2b|LINE|L2	43108	NR_135692	101929457	Hs.637111	NR_135692	ENSG00000259362	LOC101929457	-	uncharacterized LOC101929457	ncRNA	27.52	3.4	8.094117647	1.25E-12
chr15-1382	chr15	33448795	33449795	+	14.1	1000	"intron (NM_001277313, intron 3 of 20)"	AluSc5|SINE|Alu	37639	NM_001277314	342184	Hs.657649	NM_198500	ENSG00000248905	FMN1	FMN|LD	formin 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr15-1383	chr15	33634205	33635205	+	14.7	1000	"intron (NM_001243996, intron 1 of 102)"	"intron (NM_001243996, intron 1 of 102)"	31542	NM_001036	6263	Hs.709373	NM_001036	ENSG00000198838	RYR3	RYR-3	ryanodine receptor 3	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr15-1384	chr15	33735337	33736337	+	16	1000	"intron (NM_001243996, intron 1 of 102)"	"intron (NM_001243996, intron 1 of 102)"	132674	NM_001036	6263	Hs.709373	NM_001036	ENSG00000198838	RYR3	RYR-3	ryanodine receptor 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr15-1385	chr15	33791664	33792664	+	14.1	1000	"intron (NM_001243996, intron 2 of 102)"	"intron (NM_001243996, intron 2 of 102)"	189001	NM_001036	6263	Hs.709373	NM_001036	ENSG00000198838	RYR3	RYR-3	ryanodine receptor 3	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr15-1393	chr15	36590234	36591234	+	16	1000	Intergenic	Intergenic	-281070	NM_001321756	84529	Hs.48348	NM_032499	ENSG00000186073	C15orf41	HH114	chromosome 15 open reading frame 41	protein-coding	16	0	16.4818808	1.26E-14
chr15-1394	chr15	38997189	38998189	+	14.1	1000	Intergenic	Intergenic	8890	NM_207444	400359	Hs.448785	NM_207444	ENSG00000175779	C15orf53	-	chromosome 15 open reading frame 53	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr15-1396	chr15	39181688	39182688	+	14.7	1000	Intergenic	Intergenic	193389	NM_207444	400359	Hs.448785	NM_207444	ENSG00000175779	C15orf53	-	chromosome 15 open reading frame 53	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr15-1398	chr15	39606014	39607014	+	14.1	1000	Intergenic	Intergenic	63644	NM_001302797	400360	Hs.376109	NM_207445		C15orf54	-	chromosome 15 open reading frame 54	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr15-140	chr15	77880402	77882769	+	41	2367	Intergenic	Intergenic	43284	NM_032808	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding	40.97	3.4	12.05	1.07E-23
chr15-1403	chr15	39932434	39933434	+	15.4	1000	"intron (NM_152597, intron 10 of 11)"	MER57A1|LTR|ERV1	59654	NM_003246	7057	Hs.164226	NM_003246	ENSG00000137801	THBS1	THBS|THBS-1|TSP|TSP-1|TSP1	thrombospondin 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1414	chr15	40543265	40547526	+	78.1	4261	promoter-TSS (NM_001039905)	promoter-TSS (NM_001039905)	16	NM_001276717	56924	Hs.732375	NM_020168	ENSG00000137843	PAK6	PAK5	p21 (RAC1) activated kinase 6	protein-coding	78.09	7.77	10.05019305	2.91E-39
chr15-1420	chr15	42154078	42157166	+	46.7	3088	"intron (NM_016642, intron 41 of 67)"	"intron (NM_016642, intron 41 of 67)"	3127	NR_036195	100423013		NR_036195	ENSG00000264850	MIR4310	-	microRNA 4310	ncRNA	46.73	7.77	6.014157014	1.14E-16
chr15-1423	chr15	42220897	42221897	+	15.4	1000	TTS (NR_120332)	TTS (NR_120332)	7782	NR_120332	101928363	Hs.680195	NR_120332		EHD4-AS1	-	EHD4 antisense RNA 1	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr15-1427	chr15	43499038	43501925	+	44.8	2887	"exon (NM_000119, exon 8 of 13)"	"exon (NM_000119, exon 8 of 13)"	12842	NM_001114134	2038	Hs.368642	NM_000119	ENSG00000166947	EPB42	PA|SPH5	erythrocyte membrane protein band 4.2	protein-coding	44.81	8.74	5.127002288	2.02E-14
chr15-1433	chr15	46029994	46030994	+	15.4	1000	"intron (NR_135680, intron 1 of 4)"	"intron (NR_135680, intron 1 of 4)"	33101	NR_135680	105370802	Hs.447522	NR_135680	ENSG00000259200	LOC105370802	-	uncharacterized LOC105370802	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr15-1435	chr15	46230829	46231829	+	15.4	1000	Intergenic	LTR16A1|LTR|ERVL	233936	NR_135680	105370802	Hs.447522	NR_135680	ENSG00000259200	LOC105370802	-	uncharacterized LOC105370802	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr15-1438	chr15	49255096	49256096	+	14.7	1000	promoter-TSS (NM_203349)	promoter-TSS (NM_203349)	45	NM_203349	399694	Hs.642615	NM_203349	ENSG00000185634	SHC4	RaLP|SHCD	SHC adaptor protein 4	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr15-1444	chr15	54986833	54987833	+	15.4	1000	Intergenic	MER61B|LTR|ERV1	-361612	NR_135679	105370829	Hs.174934	NR_135679	ENSG00000260937	LOC105370829	-	uncharacterized LOC105370829	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr15-1445	chr15	55877849	55882233	+	80	4384	"exon (NM_001330326, exon 1 of 4)"	"exon (NM_001330326, exon 1 of 4)"	135	NM_001330326	26108	Hs.87194	NM_015617	ENSG00000171016	PYGO1	-	pygopus family PHD finger 1	protein-coding	80.01	11.65	6.867811159	1.20E-30
chr15-1446	chr15	57677897	57678897	+	15.4	1000	"intron (NM_032866, intron 1 of 18)"	"intron (NM_032866, intron 1 of 18)"	9694	NM_001252335	84952	Hs.148989	NM_032866	ENSG00000128849	CGNL1	JACOP|PCING	cingulin like 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1450	chr15	57922472	57923472	+	15.4	1000	"intron (NR_104371, intron 6 of 16)"	"intron (NR_104371, intron 6 of 16)"	38870	NM_001018091	145781	Hs.437256	NM_001018090	ENSG00000137878	GCOM1	GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom	GRINL1A complex locus 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1457	chr15	59570626	59572416	+	24.3	1790	"intron (NM_004998, intron 1 of 27)"	"intron (NM_004998, intron 1 of 27)"	72506	NM_033195	92483	Hs.307052	NM_033195	ENSG00000171989	LDHAL6B	LDH6B|LDHAL6|LDHL	lactate dehydrogenase A like 6B	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr15-1462	chr15	60898177	60899177	+	16	1000	"intron (NR_120342, intron 5 of 5)"	"intron (NR_120342, intron 5 of 5)"	-13970	NM_134262	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	16	2.91	5.498281787	4.98E-06
chr15-1465	chr15	61049901	61050901	+	13.4	1000	"intron (NM_134261, intron 1 of 10)"	L2b|LINE|L2	76633	NR_120318	100996876	Hs.511626	NR_120318		RORA-AS2	-	RORA antisense RNA 2	ncRNA	13.44	1.46	9.205479452	3.57E-07
chr15-1466	chr15	61078598	61079598	+	15.4	1000	"intron (NM_134261, intron 1 of 10)"	"intron (NM_134261, intron 1 of 10)"	105330	NR_120318	100996876	Hs.511626	NR_120318		RORA-AS2	-	RORA antisense RNA 2	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr15-1468	chr15	61139225	61140225	+	14.7	1000	"intron (NM_134261, intron 1 of 10)"	"intron (NM_134261, intron 1 of 10)"	165957	NR_120318	100996876	Hs.511626	NR_120318		RORA-AS2	-	RORA antisense RNA 2	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr15-1469	chr15	61182123	61183442	+	21.1	1319	"intron (NM_134261, intron 1 of 10)"	"intron (NM_134261, intron 1 of 10)"	209014	NR_120318	100996876	Hs.511626	NR_120318		RORA-AS2	-	RORA antisense RNA 2	ncRNA	21.12	0.97	21.77319588	2.68E-16
chr15-1471	chr15	61360722	61361722	+	15.4	1000	"intron (NM_134261, intron 1 of 10)"	"intron (NM_134261, intron 1 of 10)"	160280	NM_134261	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr15-1475	chr15	61828573	61829991	+	22.4	1418	Intergenic	Intergenic	-307780	NM_134261	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr15-1477	chr15	61897336	61898909	+	23.7	1573	Intergenic	Intergenic	-376620	NM_134261	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	23.68	5.34	4.434456929	4.49E-07
chr15-1478	chr15	61941903	61942903	+	16	1000	Intergenic	L2c|LINE|L2	410261	NM_017684	54832	Hs.511668	NM_017684	ENSG00000129003	VPS13C	PARK23	vacuolar protein sorting 13 homolog C	protein-coding	16	1.94	8.24742268	7.67E-08
chr15-1479	chr15	61944488	61945794	+	17.3	1306	Intergenic	Intergenic	407523	NM_017684	54832	Hs.511668	NM_017684	ENSG00000129003	VPS13C	PARK23	vacuolar protein sorting 13 homolog C	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr15-1482	chr15	62098913	62099913	+	15.4	1000	Intergenic	Intergenic	253251	NM_017684	54832	Hs.511668	NM_017684	ENSG00000129003	VPS13C	PARK23	vacuolar protein sorting 13 homolog C	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1484	chr15	62663801	62664801	+	15.4	1000	Intergenic	MLT2A1|LTR|ERVL	29073	NR_106733	102464834		NR_106733	ENSG00000275451	MIR6085	hsa-mir-6085	microRNA 6085	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr15-1487	chr15	62973844	62974844	+	15.4	1000	"intron (NM_015059, intron 8 of 55)"	MER58B|DNA|hAT-Charlie	34834	NM_015059	83660	Hs.569438	NM_015059	ENSG00000171914	TLN2	ILWEQ	talin 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr15-1488	chr15	63204549	63205549	+	15.4	1000	Intergenic	Intergenic	88893	NR_029709	406965		NR_029709	ENSG00000211137	MIR190A	MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a	microRNA 190a	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr15-1494	chr15	63636559	63638129	+	23.7	1570	"intron (NM_206925, intron 4 of 9)"	L3|LINE|CR1	36965	NM_001293642	771	Hs.210995	NM_001218	ENSG00000074410	CA12	CA-XII|CAXII|HsT18816|T18816	carbonic anhydrase 12	protein-coding	23.68	1.94	12.20618557	6.71E-14
chr15-1496	chr15	63794766	63795766	+	15.4	1000	Intergenic	MIRb|SINE|MIR	-1444	NR_046341	9960	Hs.458499	NM_006537	ENSG00000140455	USP3	SIH003|UBP	ubiquitin specific peptidase 3	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr15-1497	chr15	64172395	64173395	+	16	1000	Intergenic	Intergenic	-9677	NR_029944	494334		NR_029944	ENSG00000199156	MIR422A	MIRN422A	microRNA 422a	ncRNA	16	3.4	4.705882353	2.25E-05
chr15-1498	chr15	64175397	64176397	+	16	1000	Intergenic	Intergenic	-12679	NR_029944	494334		NR_029944	ENSG00000199156	MIR422A	MIRN422A	microRNA 422a	ncRNA	16	2.91	5.498281787	4.98E-06
chr15-1499	chr15	64331704	64332704	+	15.4	1000	"intron (NM_014326, intron 2 of 11)"	"intron (NM_014326, intron 2 of 11)"	6317	NM_014326	23604	Hs.237886	NM_014326	ENSG00000035664	DAPK2	DRP-1|DRP1	death associated protein kinase 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1503	chr15	65666988	65667988	+	15.4	1000	"exon (NM_004884, exon 2 of 14)"	"exon (NM_004884, exon 2 of 14)"	2890	NM_004884	9543	Hs.128292	NM_004884	ENSG00000174498	IGDCC3	HsT18880|PUNC	immunoglobulin superfamily DCC subclass member 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr15-1505	chr15	65675702	65676702	+	15.4	1000	"3' UTR (NM_020962, exon 20 of 20)"	"3' UTR (NM_020962, exon 20 of 20)"	-5824	NM_004884	9543	Hs.128292	NM_004884	ENSG00000174498	IGDCC3	HsT18880|PUNC	immunoglobulin superfamily DCC subclass member 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-151	chr15	39868489	39869759	+	23	1270	Intergenic	MLT1L|LTR|ERVL-MaLR	-4156	NM_003246	7057	Hs.164226	NM_003246	ENSG00000137801	THBS1	THBS|THBS-1|TSP|TSP-1|TSP1	thrombospondin 1	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr15-1511	chr15	67128545	67130317	+	26.2	1772	Intergenic	Intergenic	119422	NR_135687	102723481	Hs.512978	NR_135687	ENSG00000259289	LOC102723481	-	uncharacterized LOC102723481	ncRNA	26.24	3.88	6.762886598	1.00E-10
chr15-1514	chr15	68702507	68703507	+	15.4	1000	"intron (NM_001004439, intron 1 of 29)"	"intron (NM_001004439, intron 1 of 29)"	21485	NM_001004439	22801	Hs.436416	NM_012211	ENSG00000137809	ITGA11	HsT18964	integrin subunit alpha 11	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr15-1516	chr15	68815494	68816494	+	16	1000	"intron (NM_001324014, intron 1 of 12)"	L1MEg|LINE|L1	5282	NM_001324014	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding	16	2.91	5.498281787	4.98E-06
chr15-1517	chr15	68882172	68883172	+	15.4	1000	"intron (NM_006091, intron 1 of 11)"	"intron (NM_006091, intron 1 of 11)"	11364	NM_006091	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr15-1518	chr15	69008739	69009739	+	15.4	1000	"intron (NM_001190456, intron 8 of 11)"	L2a|LINE|L2	75397	NM_001324015	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1519	chr15	69020352	69021352	+	15.4	1000	TTS (NM_001324015)	TTS (NM_001324015)	73412	NR_036197	100422971		NR_036197	ENSG00000265195	MIR4312	-	microRNA 4312	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr15-1520	chr15	69193842	69194842	+	15.4	1000	"intron (NR_031680, intron 2 of 4)"	"intron (NR_031680, intron 2 of 4)"	-28497	NM_001184780	79400	Hs.657932	NM_024505	ENSG00000255346	NOX5	-	NADPH oxidase 5	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr15-1523	chr15	69816229	69819506	+	36.5	3277	Intergenic	Intergenic	-36192	NR_026979	145837	Hs.410126	NR_026979		DRAIC	-	"downregulated RNA in cancer, inhibitor of cell invasion and migration"	ncRNA	36.48	8.25	4.421818182	3.05E-10
chr15-1525	chr15	69828474	69829474	+	15.4	1000	Intergenic	MIRb|SINE|MIR	-25085	NR_026979	145837	Hs.410126	NR_026979		DRAIC	-	"downregulated RNA in cancer, inhibitor of cell invasion and migration"	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr15-1526	chr15	69850921	69851921	+	15.4	1000	Intergenic	Intergenic	-2638	NR_026979	145837	Hs.410126	NR_026979		DRAIC	-	"downregulated RNA in cancer, inhibitor of cell invasion and migration"	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr15-1528	chr15	69863921	69864921	+	15.4	1000	TTS (NR_026979)	TTS (NR_026979)	10362	NR_026979	145837	Hs.410126	NR_026979		DRAIC	-	"downregulated RNA in cancer, inhibitor of cell invasion and migration"	ncRNA	15.36	0	15.82260557	1.26E-14
chr15-1529	chr15	70111888	70112888	+	16	1000	Intergenic	Intergenic	-15185	NR_026764	414926	Hs.569502	NR_026764	ENSG00000259703	LINC00593	C15orf50	long intergenic non-protein coding RNA 593	ncRNA	16	3.88	4.12371134	7.91E-05
chr15-1530	chr15	70276120	70277120	+	14.7	1000	Intergenic	Intergenic	95187	NR_030714	693214		NR_030714	ENSG00000207965	MIR629	MIRN629|hsa-mir-629|mir-629	microRNA 629	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr15-1533	chr15	70496510	70497510	+	16	1000	Intergenic	MLT2B1|LTR|ERVL	-106754	NM_001105192	7090	Hs.287362	NM_005078	ENSG00000140332	TLE3	ESG|ESG3|GRG3|HsT18976	transducin like enhancer of split 3	protein-coding	16	1.94	8.24742268	7.67E-08
chr15-1537	chr15	71099485	71100485	+	16	1000	Intergenic	Intergenic	-44135	NM_018003	55075	Hs.108049	NM_018003	ENSG00000137831	UACA	NUCLING	uveal autoantigen with coiled-coil domains and ankyrin repeats	protein-coding	16	1.94	8.24742268	7.67E-08
chr15-1538	chr15	71143771	71144771	+	14.7	1000	"intron (NM_197958, intron 1 of 1)"	L2c|LINE|L2	-1307	NM_001284357	54839	Hs.12692	NM_017691	ENSG00000137821	LRRC49	PGs4	leucine rich repeat containing 49	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr15-1541	chr15	71748210	71749210	+	15.4	1000	"intron (NM_024817, intron 6 of 16)"	"intron (NM_024817, intron 6 of 16)"	-90831	NM_001286429	79875	Hs.387057	NM_024817	ENSG00000187720	THSD4	ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005	thrombospondin type 1 domain containing 4	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1543	chr15	71953722	71954722	+	14.1	1000	"intron (NM_001286429, intron 2 of 11)"	MIR|SINE|MIR	29656	NR_120346	101929173	Hs.680593	NR_120346		THSD4-AS2	-	THSD4 antisense RNA 2	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr15-1553	chr15	74246256	74247256	+	16	1000	Intergenic	Intergenic	-26167	NR_040069	100287616	Hs.599785	NR_040066	ENSG00000261801	LOXL1-AS1	-	LOXL1 antisense RNA 1	ncRNA	16	0.97	16.49484536	3.54E-11
chr15-1558	chr15	74669206	74670206	+	16	1000	Intergenic	Intergenic	-9625	NM_000781	1583	Hs.303980	NM_000781	ENSG00000140459	CYP11A1	CYP11A|CYPXIA1|P450SCC	cytochrome P450 family 11 subfamily A member 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr15-1561	chr15	75596426	75597426	+	15.4	1000	Intergenic	L1M1|LINE|L1	21744	NM_001145224	653643	Hs.672474	NM_001145224	ENSG00000140478	GOLGA6D	-	golgin A6 family member D	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1563	chr15	76045237	76046543	+	21.1	1306	Intergenic	Intergenic	8766	NR_036198	100423035		NR_036198	ENSG00000261043	MIR4313	-	microRNA 4313	ncRNA	21.12	3.88	5.443298969	1.44E-07
chr15-1565	chr15	76450375	76451375	+	16	1000	"intron (NM_152335, intron 4 of 10)"	"intron (NM_152335, intron 4 of 10)"	22952	NR_120360	101929439	Hs.631721	NR_120360	ENSG00000259422	LOC101929439	-	uncharacterized LOC101929439	ncRNA	16	0.97	16.49484536	3.54E-11
chr15-1567	chr15	77856418	77857418	+	15.4	1000	Intergenic	Intergenic	38981	NR_135692	101929457	Hs.637111	NR_135692	ENSG00000259362	LOC101929457	-	uncharacterized LOC101929457	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr15-1568	chr15	77877643	77878643	+	15.4	1000	Intergenic	L2a|LINE|L2	46726	NM_032808	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1570	chr15	77886048	77887972	+	28.8	1924	Intergenic	MER33|DNA|hAT-Charlie	37859	NM_032808	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding	28.8	5.82	4.948453608	3.50E-09
chr15-1572	chr15	77949235	77951263	+	34.6	2028	"intron (NM_001301195, intron 3 of 3)"	"intron (NM_001301195, intron 3 of 3)"	-2144	NR_120362	101929478	Hs.569510	NR_120361	ENSG00000259281	LINGO1-AS2	-	LINGO1 antisense RNA 2	ncRNA	34.56	2.91	11.87628866	4.47E-20
chr15-1574	chr15	78035521	78037207	+	24.3	1686	"intron (NM_001301186, intron 2 of 5)"	L2a|LINE|L2	-23271	NM_001301197	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding	24.32	4.37	5.565217391	4.38E-09
chr15-1577	chr15	78266957	78267957	+	16	1000	Intergenic	Intergenic	19110	NR_026998	91450	Hs.406766	NR_026998		LOC91450	-	uncharacterized LOC91450	ncRNA	16	1.46	10.95890411	3.44E-09
chr15-158	chr15	63135281	63136641	+	23.7	1360	"3' UTR (NM_015059, exon 56 of 56)"	"3' UTR (NM_015059, exon 56 of 56)"	19805	NR_029709	406965		NR_029709	ENSG00000211137	MIR190A	MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a	microRNA 190a	ncRNA	23.68	3.4	6.964705882	5.45E-10
chr15-1581	chr15	78666240	78667240	+	15.4	1000	Intergenic	L2b|LINE|L2	34074	NM_004378	1381	Hs.346950	NM_004378	ENSG00000166426	CRABP1	CRABP|CRABP-I|CRABPI|RBP5	cellular retinoic acid binding protein 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr15-1584	chr15	80732443	80733713	+	19.2	1270	"intron (NM_014862, intron 1 of 18)"	"intron (NM_014862, intron 1 of 18)"	36386	NM_014862	9915	Hs.459070	NM_014862	ENSG00000172379	ARNT2	WEDAS|bHLHe1	aryl hydrocarbon receptor nuclear translocator 2	protein-coding	19.2	2.43	7.901234568	1.91E-09
chr15-1586	chr15	81384527	81385527	+	14.7	1000	Intergenic	Intergenic	-41617	NM_173528	161502	Hs.130979	NM_173528	ENSG00000156206	CFAP161	C15orf26	cilia and flagella associated protein 161	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr15-1590	chr15	82372462	82373462	+	15.4	1000	Intergenic	Intergenic	-7973	NR_120367	101929690	Hs.176109	NR_120367	ENSG00000259518	LINC01583	-	long intergenic non-protein coding RNA 1583	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr15-1591	chr15	83472440	83473440	+	16	1000	"intron (NM_001281805, intron 1 of 12)"	"intron (NM_001281805, intron 1 of 12)"	1882	NM_001281806	123722	Hs.719372	NM_001007122	ENSG00000186628	FSD2	SPRYD1	fibronectin type III and SPRY domain containing 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr15-1592	chr15	84689097	84690097	+	15.4	1000	"intron (NM_001301110, intron 25 of 29)"	"intron (NM_001301110, intron 25 of 29)"	-59342	NR_036652	648809	Hs.585157	NR_036652		EFTUD1P1	FAM42B|HsT19321	elongation factor Tu GTP binding domain containing 1 pseudogene 1	pseudo	15.36	1.46	10.52054795	3.44E-09
chr15-1594	chr15	85719162	85720162	+	14.7	1000	Intergenic	Intergenic	28856	NR_049748	642423	Hs.681665	NR_049748		LOC642423	-	golgin A2 pseudogene	pseudo	14.72	0	15.16333034	3.99E-13
chr15-1596	chr15	88769053	88770053	+	14.1	1000	"intron (NM_001007156, intron 3 of 15)"	"intron (NM_001007156, intron 3 of 15)"	-20348	NM_001320135	4916	Hs.185701	NM_002530	ENSG00000140538	NTRK3	GP145-TrkC|TRKC|gp145(trkC)	neurotrophic receptor tyrosine kinase 3	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr15-1598	chr15	88826482	88827482	+	15.4	1000	Intergenic	Intergenic	-27020	NM_001012338	4916	Hs.185701	NM_002530	ENSG00000140538	NTRK3	GP145-TrkC|TRKC|gp145(trkC)	neurotrophic receptor tyrosine kinase 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr15-1600	chr15	89776895	89777895	+	15.4	1000	Intergenic	MER9a3|LTR|ERVK	-9799	NM_018193	55215	Hs.513126	NM_018193	ENSG00000140525	FANCI	KIAA1794	Fanconi anemia complementation group I	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1604	chr15	89978305	89979305	+	13.4	1000	Intergenic	Intergenic	57532	NR_015411	254559	Hs.136313	NR_015411	ENSG00000255571	MIR9-3HG	LINC00925	MIR9-3 host gene	ncRNA	13.44	0	13.84477987	1.16E-11
chr15-1605	chr15	90204796	90205796	+	16	1000	Intergenic	Intergenic	-6614	NM_198525	374654	Hs.513134	NM_198525	ENSG00000166813	KIF7	ACLS|AGBK|HLS2|JBTS12|UNQ340	kinesin family member 7	protein-coding	16	1.46	10.95890411	3.44E-09
chr15-1609	chr15	90457863	90458863	+	16	1000	Intergenic	Intergenic	-2141	NM_001199058	100526783	Hs.744890	NM_001199058	ENSG00000250021	C15orf38-AP3S2	-	C15orf38-AP3S2 readthrough	protein-coding	16	3.88	4.12371134	7.91E-05
chr15-1610	chr15	90470928	90471928	+	15.4	1000	Intergenic	AluSx1|SINE|Alu	-15206	NM_001199058	100526783	Hs.744890	NM_001199058	ENSG00000250021	C15orf38-AP3S2	-	C15orf38-AP3S2 readthrough	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr15-1611	chr15	90481489	90483682	+	33.9	2193	Intergenic	AluSc8|SINE|Alu	-26363	NM_001199058	100526783	Hs.744890	NM_001199058	ENSG00000250021	C15orf38-AP3S2	-	C15orf38-AP3S2 readthrough	protein-coding	33.92	3.88	8.742268041	4.55E-16
chr15-1616	chr15	91663059	91664059	+	16	1000	"intron (NM_001323039, intron 1 of 12)"	MSTA|LTR|ERVL-MaLR	18673	NM_001323040	9899	Hs.21754	NM_014848	ENSG00000185518	SV2B	HsT19680	synaptic vesicle glycoprotein 2B	protein-coding	16	3.88	4.12371134	7.91E-05
chr15-1617	chr15	91679044	91680044	+	16	1000	"intron (NM_001323040, intron 2 of 12)"	"intron (NM_001323040, intron 2 of 12)"	34658	NM_001323040	9899	Hs.21754	NM_014848	ENSG00000185518	SV2B	HsT19680	synaptic vesicle glycoprotein 2B	protein-coding	16	1.46	10.95890411	3.44E-09
chr15-1618	chr15	91691712	91692712	+	14.1	1000	"intron (NM_001323040, intron 2 of 12)"	MLT2B4|LTR|ERVL	47326	NM_001323040	9899	Hs.21754	NM_014848	ENSG00000185518	SV2B	HsT19680	synaptic vesicle glycoprotein 2B	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr15-1625	chr15	92990624	92991972	+	22.4	1348	"intron (NM_001330416, intron 4 of 4)"	"intron (NM_001330416, intron 4 of 4)"	23478	NR_126501	104613533	Hs.97584	NR_126501	ENSG00000259170	LOC104613533	-	uncharacterized LOC104613533	ncRNA	22.4	1.46	15.34246575	8.59E-15
chr15-1627	chr15	93039379	93040629	+	19.8	1250	"intron (NM_001301106, intron 2 of 2)"	"intron (NM_001301106, intron 2 of 2)"	25097	NM_001301106	145858	Hs.367879	NM_153040		C15orf32	-	chromosome 15 open reading frame 32	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr15-163	chr15	68723758	68725055	+	25	1297	promoter-TSS (NM_001004439)	promoter-TSS (NM_001004439)	86	NM_001004439	22801	Hs.436416	NM_012211	ENSG00000137809	ITGA11	HsT18964	integrin subunit alpha 11	protein-coding	24.96	1.94	12.86597938	5.33E-15
chr15-1634	chr15	96526901	96527901	+	16	1000	Intergenic	MER21C|LTR|ERVL	-341756	NM_001145155	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	16	2.43	6.58436214	7.90E-07
chr15-1638	chr15	97489789	97491485	+	23	1696	Intergenic	Intergenic	164000	NM_001304804	145946	Hs.326528	NM_173499	ENSG00000185594	SPATA8	SRG8	spermatogenesis associated 8	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr15-1639	chr15	97756967	97758261	+	19.2	1294	Intergenic	MIR|SINE|MIR	307427	NR_120324	101927286	Hs.611279	NR_120324	ENSG00000259664	LOC101927286	-	uncharacterized LOC101927286	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr15-1643	chr15	98847202	98848779	+	25	1577	Intergenic	Intergenic	209621	NM_182562	283777	Hs.668070	NM_182562	ENSG00000185087	FAM169B	-	family with sequence similarity 169 member B	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr15-1645	chr15	98928366	98929366	+	16	1000	Intergenic	Intergenic	128745	NM_182562	283777	Hs.668070	NM_182562	ENSG00000185087	FAM169B	-	family with sequence similarity 169 member B	protein-coding	16	1.94	8.24742268	7.67E-08
chr15-1646	chr15	99059074	99060074	+	15.4	1000	Intergenic	AluSz|SINE|Alu	-1963	NM_182562	283777	Hs.668070	NM_182562	ENSG00000185087	FAM169B	-	family with sequence similarity 169 member B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1649	chr15	99326882	99327882	+	14.7	1000	promoter-TSS (NR_039864)	promoter-TSS (NR_039864)	-273	NR_039864	100616432		NR_039864	ENSG00000264480	MIR4714	-	microRNA 4714	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr15-1651	chr15	99671009	99673391	+	34.6	2382	"exon (NM_145728, exon 5 of 5)"	"exon (NM_145728, exon 5 of 5)"	26914	NM_145728	23336	Hs.207106	NM_015286	ENSG00000182253	SYNM	DMN|SYN	synemin	protein-coding	34.56	2.91	11.87628866	4.47E-20
chr15-1662	chr15	101608195	101609751	+	24.3	1556	"exon (NM_024652, exon 34 of 34)"	"exon (NM_024652, exon 34 of 34)"	-149485	NR_135828	101927751	Hs.659224	NR_135827	ENSG00000259583	LOC101927751	-	uncharacterized LOC101927751	ncRNA	24.32	4.85	5.01443299	2.27E-08
chr15-1667	chr15	102053923	102054923	+	16	1000	Intergenic	L1MC1|LINE|L1	-24236	NM_138322	5046	Hs.498494	NM_002570	ENSG00000140479	PCSK6	PACE4|SPC4	proprotein convertase subtilisin/kexin type 6	protein-coding	16	2.43	6.58436214	7.90E-07
chr15-1699	chr15	22766871	22767871	+	15.4	1000	Intergenic	MLT1A0|LTR|ERVL-MaLR	31103	NM_001271664	440243		NM_001271664		GOLGA6L22	-	golgin A6 family-like 22	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-17	chr15	22488787	22490374	+	42.2	1587	Intergenic	Intergenic	-23033	NR_135666	646370	Hs.737645	NR_135666		IGHV1OR15-3	IGHV1OR153	immunoglobulin heavy variable 1/OR15-3 (pseudogene)	pseudo	42.25	9.22	4.582429501	2.16E-12
chr15-1700	chr15	22784200	22785486	+	15.4	1286	Intergenic	AluJr4|SINE|Alu	-48552	NM_052903	114791	Hs.533898	NM_052903	ENSG00000275835	TUBGCP5	GCP5	tubulin gamma complex associated protein 5	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr15-1705	chr15	27915382	27916382	+	15.4	1000	Intergenic	Intergenic	428576	NM_001300984	4948	Hs.654411	NM_000275	ENSG00000104044	OCA2	BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1	OCA2 melanosomal transmembrane protein	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr15-1707	chr15	28338457	28340183	+	25.6	1726	"intron (NM_001300984, intron 1 of 22)"	"intron (NM_001300984, intron 1 of 22)"	5138	NM_001300984	4948	Hs.654411	NM_000275	ENSG00000104044	OCA2	BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1	OCA2 melanosomal transmembrane protein	protein-coding	25.6	1.94	13.19587629	4.03E-16
chr15-1709	chr15	29833601	29836224	+	39	2623	"intron (NM_015307, intron 1 of 10)"	L1MB3|LINE|L1	28015	NM_015307	23359	Hs.383564	NM_015307	ENSG00000104059	FAM189A1	TMEM228	family with sequence similarity 189 member A1	protein-coding	39.04	7.28	5.362637363	6.93E-13
chr15-1712	chr15	29854451	29855451	+	15.4	1000	"intron (NM_015307, intron 1 of 10)"	"intron (NM_015307, intron 1 of 10)"	7976	NM_015307	23359	Hs.383564	NM_015307	ENSG00000104059	FAM189A1	TMEM228	family with sequence similarity 189 member A1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr15-1715	chr15	30368967	30369967	+	14.7	1000	Intergenic	HAL1|LINE|L1	-5691	NM_001282472	653073	Hs.574257	NM_001282472	ENSG00000179938	GOLGA8J	-	golgin A8 family member J	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr15-1716	chr15	31298507	31299507	+	14.1	1000	"intron (NM_002420, intron 26 of 26)"	L1MEf|LINE|L1	-15200	NM_017762	54893	Hs.30141	NM_017762	ENSG00000166912	MTMR10	-	myotubularin related protein 10	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr15-1720	chr15	31794725	31795725	+	14.7	1000	"intron (NM_001329907, intron 10 of 10)"	"intron (NM_001329907, intron 10 of 10)"	176167	NM_015995	51621	Hs.376443	NM_015995	ENSG00000169926	KLF13	BTEB3|FKLF2|NSLP1|RFLAT-1|RFLAT1	Kruppel like factor 13	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr15-1721	chr15	31814693	31816504	+	30.7	1811	"intron (NM_001329907, intron 9 of 10)"	"intron (NM_001329907, intron 9 of 10)"	196540	NM_015995	51621	Hs.376443	NM_015995	ENSG00000169926	KLF13	BTEB3|FKLF2|NSLP1|RFLAT-1|RFLAT1	Kruppel like factor 13	protein-coding	30.72	3.88	7.917525773	3.25E-14
chr15-1722	chr15	31846442	31847975	+	26.2	1533	"intron (NM_001329907, intron 6 of 10)"	"intron (NM_001329907, intron 6 of 10)"	228150	NM_015995	51621	Hs.376443	NM_015995	ENSG00000169926	KLF13	BTEB3|FKLF2|NSLP1|RFLAT-1|RFLAT1	Kruppel like factor 13	protein-coding	26.24	3.4	7.717647059	9.95E-12
chr15-1723	chr15	32070792	32072078	+	15.4	1286	"intron (NM_001329907, intron 1 of 10)"	"intron (NM_001329907, intron 1 of 10)"	91440	NM_001329907	161725	Hs.355236	NM_130901	ENSG00000169918	OTUD7A	C15orf16|C16ORF15|CEZANNE2|OTUD7	OTU deubiquitinase 7A	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr15-1725	chr15	32107442	32108442	+	15.4	1000	"intron (NM_001329907, intron 1 of 10)"	"intron (NM_001329907, intron 1 of 10)"	54933	NM_001329907	161725	Hs.355236	NM_130901	ENSG00000169918	OTUD7A	C15orf16|C16ORF15|CEZANNE2|OTUD7	OTU deubiquitinase 7A	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr15-1726	chr15	32138102	32139102	+	14.1	1000	"intron (NM_001329907, intron 1 of 10)"	"intron (NM_001329907, intron 1 of 10)"	24273	NM_001329907	161725	Hs.355236	NM_130901	ENSG00000169918	OTUD7A	C15orf16|C16ORF15|CEZANNE2|OTUD7	OTU deubiquitinase 7A	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr15-1729	chr15	32402977	32403977	+	14.7	1000	"intron (NR_046324, intron 3 of 7)"	"intron (NR_046324, intron 3 of 7)"	80791	NR_046324	1139	Hs.511772	NM_000746	ENSG00000175344	CHRNA7	CHRNA7-2|NACHRA7	cholinergic receptor nicotinic alpha 7 subunit	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr15-1733	chr15	33149245	33151729	+	40.3	2484	"intron (NM_001103184, intron 12 of 16)"	"intron (NM_001103184, intron 12 of 16)"	-139421	NR_109767	100131315	Hs.610545	NR_109767	ENSG00000259721	LOC100131315	-	uncharacterized LOC100131315	ncRNA	40.33	8.74	4.614416476	1.21E-11
chr15-1734	chr15	33188780	33190556	+	23	1776	"intron (NM_001103184, intron 11 of 16)"	"intron (NM_001103184, intron 11 of 16)"	170565	NM_001103184	342184	Hs.657649	NM_198500	ENSG00000248905	FMN1	FMN|LD	formin 1	protein-coding	23.04	1.46	15.78082192	5.41E-16
chr15-1736	chr15	33229017	33230017	+	14.7	1000	"intron (NM_001103184, intron 5 of 16)"	L1M3d|LINE|L1	130716	NM_001103184	342184	Hs.657649	NM_198500	ENSG00000248905	FMN1	FMN|LD	formin 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr15-174	chr15	83620236	83622062	+	32.6	1826	"intron (NM_199330, intron 1 of 8)"	CpG	327	NM_004839	9455	Hs.578443	NM_004839	ENSG00000103942	HOMER2	ACPD|CPD|DFNA68|HOMER-2|VESL-2	homer scaffolding protein 2	protein-coding	32.64	3.88	8.412371134	3.92E-15
chr15-1743	chr15	33926566	33927566	+	14.7	1000	"intron (NM_001243996, intron 25 of 102)"	"intron (NM_001243996, intron 25 of 102)"	323903	NM_001036	6263	Hs.709373	NM_001036	ENSG00000198838	RYR3	RYR-3	ryanodine receptor 3	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr15-1749	chr15	34080104	34081104	+	14.1	1000	"exon (NM_001036, exon 67 of 104)"	"exon (NM_001036, exon 67 of 104)"	-179911	NM_001320917	1133	Hs.584747	NM_012125	ENSG00000184984	CHRM5	HM5	cholinergic receptor muscarinic 5	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr15-175	chr15	88798312	88799597	+	23	1285	"intron (NR_038229, intron 1 of 3)"	"intron (NR_038229, intron 1 of 3)"	446	NM_001320134	4916	Hs.185701	NM_002530	ENSG00000140538	NTRK3	GP145-TrkC|TRKC|gp145(trkC)	neurotrophic receptor tyrosine kinase 3	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr15-1752	chr15	34619775	34620775	+	15.4	1000	"intron (NM_001042495, intron 2 of 25)"	"intron (NM_001042495, intron 2 of 25)"	8770	NM_001042497	9990	Hs.510939	NM_005135	ENSG00000140199	SLC12A6	ACCPN|KCC3|KCC3A|KCC3B	solute carrier family 12 member 6	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1755	chr15	35064989	35065989	+	13.4	1000	"intron (NR_120329, intron 1 of 2)"	HAL1|LINE|L1	18204	NR_120329	101928174	Hs.680670	NR_120329	ENSG00000250007	LOC101928174	-	uncharacterized LOC101928174	ncRNA	13.44	2.43	5.530864198	2.99E-05
chr15-1756	chr15	35114625	35116404	+	28.8	1779	Intergenic	L2c|LINE|L2	-27587	NM_005159	70	Hs.118127	NM_005159	ENSG00000159251	ACTC1	ACTC|ASD5|CMD1R|CMH11|LVNC4	"actin, alpha, cardiac muscle 1"	protein-coding	28.8	3.88	7.422680412	1.97E-12
chr15-1757	chr15	35988249	35990021	+	24.3	1772	"intron (NR_038251, intron 1 of 2)"	"intron (NR_038251, intron 1 of 2)"	-150731	NM_080650	89978	Hs.107196	NM_080650	ENSG00000134146	DPH6	ATPBD4	diphthamine biosynthesis 6	protein-coding	24.32	2.43	10.00823045	2.59E-13
chr15-176	chr15	88856491	88857750	+	23.7	1259	Intergenic	Intergenic	-57158	NM_001012338	4916	Hs.185701	NM_002530	ENSG00000140538	NTRK3	GP145-TrkC|TRKC|gp145(trkC)	neurotrophic receptor tyrosine kinase 3	protein-coding	23.68	4.37	5.418764302	2.46E-08
chr15-1760	chr15	37173494	37175678	+	37.8	2184	"non-coding (NR_024264, exon 2 of 7)"	"non-coding (NR_024264, exon 2 of 7)"	4148	NR_024264	145845	Hs.302693	NM_001101327		LOC145845	-	uncharacterized LOC145845	ncRNA	37.76	7.28	5.186813187	3.68E-12
chr15-1762	chr15	38379595	38380595	+	15.4	1000	Intergenic	AluSz|SINE|Alu	47501	NR_120330	101928227	Hs.602381	NR_120330	ENSG00000259225	LOC101928227	-	uncharacterized LOC101928227	ncRNA	15.36	0	15.82260557	1.26E-14
chr15-1764	chr15	39008096	39009096	+	14.1	1000	Intergenic	LTR12F|LTR|ERV1	19797	NM_207444	400359	Hs.448785	NM_207444	ENSG00000175779	C15orf53	-	chromosome 15 open reading frame 53	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr15-1766	chr15	39034536	39035536	+	14.1	1000	Intergenic	Intergenic	46237	NM_207444	400359	Hs.448785	NM_207444	ENSG00000175779	C15orf53	-	chromosome 15 open reading frame 53	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr15-1769	chr15	39073987	39074987	+	14.1	1000	Intergenic	ERVL-E-int|LTR|ERVL	85688	NM_207444	400359	Hs.448785	NM_207444	ENSG00000175779	C15orf53	-	chromosome 15 open reading frame 53	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr15-1770	chr15	39103028	39104028	+	15.4	1000	Intergenic	L2b|LINE|L2	114729	NM_207444	400359	Hs.448785	NM_207444	ENSG00000175779	C15orf53	-	chromosome 15 open reading frame 53	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1771	chr15	39278313	39279313	+	15.4	1000	Intergenic	MER103C|DNA|hAT-Charlie	-264057	NR_144507	400360	Hs.376109	NM_207445		C15orf54	-	chromosome 15 open reading frame 54	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr15-1772	chr15	39455222	39456222	+	14.7	1000	Intergenic	L1M4c|LINE|L1	-87148	NR_144507	400360	Hs.376109	NM_207445		C15orf54	-	chromosome 15 open reading frame 54	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr15-1773	chr15	39626930	39627930	+	14.7	1000	Intergenic	Intergenic	84560	NM_001302797	400360	Hs.376109	NM_207445		C15orf54	-	chromosome 15 open reading frame 54	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr15-1774	chr15	39650546	39652021	+	22.4	1475	Intergenic	Intergenic	108413	NM_001302797	400360	Hs.376109	NM_207445		C15orf54	-	chromosome 15 open reading frame 54	ncRNA	22.4	3.88	5.773195876	2.53E-08
chr15-1776	chr15	39731326	39732326	+	15.4	1000	Intergenic	L1M5|LINE|L1	-141454	NM_003246	7057	Hs.164226	NM_003246	ENSG00000137801	THBS1	THBS|THBS-1|TSP|TSP-1|TSP1	thrombospondin 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr15-1778	chr15	39791632	39792936	+	21.1	1304	Intergenic	MLT1H|LTR|ERVL-MaLR	-80996	NM_003246	7057	Hs.164226	NM_003246	ENSG00000137801	THBS1	THBS|THBS-1|TSP|TSP-1|TSP1	thrombospondin 1	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr15-1782	chr15	39922956	39923956	+	14.1	1000	"intron (NM_152597, intron 10 of 11)"	"intron (NM_152597, intron 10 of 11)"	50176	NM_003246	7057	Hs.164226	NM_003246	ENSG00000137801	THBS1	THBS|THBS-1|TSP|TSP-1|TSP1	thrombospondin 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr15-1783	chr15	39996738	39997738	+	14.1	1000	"intron (NM_152597, intron 10 of 11)"	"intron (NM_152597, intron 10 of 11)"	77801	NM_152597	161835	Hs.129598	NM_152597	ENSG00000150667	FSIP1	HSD10	fibrous sheath interacting protein 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr15-1785	chr15	40009453	40010453	+	14.1	1000	"intron (NM_152597, intron 9 of 11)"	LTR87|LTR|ERVL?	65086	NM_152597	161835	Hs.129598	NM_152597	ENSG00000150667	FSIP1	HSD10	fibrous sheath interacting protein 1	protein-coding	14.08	0	14.5040551	3.99E-13
chr15-1791	chr15	40095095	40096095	+	13.4	1000	"intron (NM_007223, intron 2 of 2)"	AluSx|SINE|Alu	20488	NR_135665	105370941	Hs.587843	NR_135665	ENSG00000261136	LOC105370941	-	uncharacterized LOC105370941	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr15-1792	chr15	40100437	40102110	+	24.3	1673	"intron (NM_001271854, intron 1 of 3)"	"intron (NM_001271854, intron 1 of 3)"	20204	NM_001271855	11245	Hs.37196	NM_007223	ENSG00000166073	GPR176	HB-954	G protein-coupled receptor 176	protein-coding	24.32	2.43	10.00823045	2.59E-13
chr15-1797	chr15	40802875	40804666	+	26.9	1791	Intergenic	CpG	20979	NR_002208	359821	Hs.678598	NR_002208		MRPL42P5	-	mitochondrial ribosomal protein L42 pseudogene 5	pseudo	26.88	4.37	6.151029748	1.19E-10
chr15-1803	chr15	42179032	42180032	+	14.1	1000	"exon (NM_016642, exon 6 of 68)"	"exon (NM_016642, exon 6 of 68)"	-5443	NR_135681	105370792	Hs.627877	NR_135681		LOC105370792	-	uncharacterized LOC105370792	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr15-1806	chr15	42235697	42236697	+	15.4	1000	"intron (NM_139265, intron 2 of 5)"	"intron (NM_139265, intron 2 of 5)"	22582	NR_120332	101928363	Hs.680195	NR_120332		EHD4-AS1	-	EHD4 antisense RNA 1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr15-1808	chr15	42249862	42250862	+	14.1	1000	"intron (NM_139265, intron 1 of 5)"	"intron (NM_139265, intron 1 of 5)"	14393	NM_139265	30844	Hs.143703	NM_139265	ENSG00000103966	EHD4	PAST4	EH domain containing 4	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr15-1809	chr15	42263315	42265476	+	31.4	2161	promoter-TSS (NR_120334)	promoter-TSS (NR_120334)	360	NM_139265	30844	Hs.143703	NM_139265	ENSG00000103966	EHD4	PAST4	EH domain containing 4	protein-coding	31.36	3.4	9.223529412	1.89E-15
chr15-1811	chr15	42271861	42272861	+	15.4	1000	"intron (NR_120334, intron 2 of 3)"	MLT1J|LTR|ERVL-MaLR	7400	NR_120334	101928388	Hs.738043	NR_120334	ENSG00000246740	PLA2G4E-AS1	-	PLA2G4E antisense RNA 1	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr15-1812	chr15	42353056	42354056	+	12.8	1000	Intergenic	L1ME3E|LINE|L1	-10655	NM_001206670	123745	Hs.668060	NM_001080490	ENSG00000188089	PLA2G4E	-	phospholipase A2 group IVE	protein-coding	12.8	1.94	6.597938144	4.51E-06
chr15-1816	chr15	43554127	43555127	+	14.7	1000	"intron (NM_004245, intron 1 of 11)"	"intron (NM_004245, intron 1 of 11)"	4428	NM_201631	9333	Hs.129719	NM_004245	ENSG00000104055	TGM5	PSS2|TGASE5|TGASEX|TGM6|TGMX|TGX	transglutaminase 5	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr15-1824	chr15	47596530	47600698	+	54.4	4168	"intron (NM_001198999, intron 1 of 19)"	"intron (NM_001198999, intron 1 of 19)"	122211	NM_001198999	80031	Hs.511265	NM_020858	ENSG00000137872	SEMA6D	-	semaphorin 6D	protein-coding	54.41	4.85	11.2185567	3.60E-29
chr15-1827	chr15	47692692	47693692	+	14.7	1000	"intron (NM_001198999, intron 1 of 19)"	MIR|SINE|MIR	216789	NM_001198999	80031	Hs.511265	NM_020858	ENSG00000137872	SEMA6D	-	semaphorin 6D	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr15-1828	chr15	47754123	47755123	+	15.4	1000	"intron (NM_001198999, intron 2 of 19)"	"intron (NM_001198999, intron 2 of 19)"	-256063	NM_153619	80031	Hs.511265	NM_020858	ENSG00000137872	SEMA6D	-	semaphorin 6D	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr15-1829	chr15	48134577	48135577	+	14.7	1000	"intron (NR_120336, intron 2 of 4)"	MLT1A0|LTR|ERVL-MaLR	3356	NR_120336	101928442	Hs.242804	NR_120336	ENSG00000259572	LINC01491	-	long intergenic non-protein coding RNA 1491	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr15-183	chr15	95134138	95135392	+	23.7	1254	Intergenic	Intergenic	235601	NM_001159644	55784	Hs.33368	NM_018349	ENSG00000140563	MCTP2	-	multiple C2 and transmembrane domain containing 2	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr15-1832	chr15	52477847	52478847	+	14.7	1000	"intron (NM_016194, intron 1 of 12)"	LTR56|LTR|ERV1	5218	NM_016194	10681	Hs.155090	NM_006578	ENSG00000069966	GNB5	GB5|IDDCA|LADCI	G protein subunit beta 5	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr15-1833	chr15	52987011	52988011	+	15.4	1000	Intergenic	L2|LINE|L2	-16680	NM_019600	56204	Hs.152385	NM_019600	ENSG00000047346	FAM214A	KIAA1370	family with sequence similarity 214 member A	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr15-1837	chr15	53095093	53098591	+	51.8	3498	Intergenic	Intergenic	-14633	NM_004498	3175	Hs.658573	NM_004498	ENSG00000169856	ONECUT1	HNF-6|HNF6|HNF6A	one cut homeobox 1	protein-coding	51.85	5.34	9.709737828	1.35E-25
chr15-184	chr15	96541548	96542548	+	21.8	1000	Intergenic	Intergenic	-327109	NM_001145155	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr15-1849	chr15	58218293	58219293	+	14.7	1000	Intergenic	Intergenic	87502	NM_170697	8854	Hs.643455	NM_003888	ENSG00000128918	ALDH1A2	RALDH(II)|RALDH2|RALDH2-T	aldehyde dehydrogenase 1 family member A2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr15-185	chr15	99192571	99195708	+	64	3137	"non-coding (NR_126453, exon 1 of 1)"	"non-coding (NR_126453, exon 1 of 1)"	311	NR_126453	104472848	Hs.349049	NR_126453		IRAIN	IGF1R-AS	IGF1R antisense imprinted non-protein coding RNA	ncRNA	64.01	6.31	10.14421553	1.14E-32
chr15-1851	chr15	59496767	59497767	+	14.7	1000	"intron (NM_004998, intron 15 of 27)"	"intron (NM_004998, intron 15 of 27)"	-1748	NM_033195	92483	Hs.307052	NM_033195	ENSG00000171989	LDHAL6B	LDH6B|LDHAL6|LDHL	lactate dehydrogenase A like 6B	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr15-1855	chr15	59663462	59664462	+	14.7	1000	"intron (NM_004998, intron 1 of 27)"	CpG	1109	NM_004998	4643	Hs.654506	NM_004998	ENSG00000157483	MYO1E	FSGS6|HuncM-IC|MYO1C	myosin IE	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr15-1857	chr15	59733038	59734038	+	14.7	1000	"intron (NM_152450, intron 1 of 8)"	MER3|DNA|hAT-Charlie	3166	NM_152450	145773	Hs.531168	NM_152450	ENSG00000157470	FAM81A	-	family with sequence similarity 81 member A	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr15-1868	chr15	61186844	61187844	+	15.4	1000	"intron (NM_134261, intron 1 of 10)"	"intron (NM_134261, intron 1 of 10)"	213576	NR_120318	100996876	Hs.511626	NR_120318		RORA-AS2	-	RORA antisense RNA 2	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr15-1869	chr15	61222363	61223363	+	14.1	1000	"intron (NM_134261, intron 1 of 10)"	"intron (NM_134261, intron 1 of 10)"	249095	NR_120318	100996876	Hs.511626	NR_120318		RORA-AS2	-	RORA antisense RNA 2	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr15-1872	chr15	61341384	61342384	+	14.7	1000	"intron (NM_134261, intron 1 of 10)"	AluSc8|SINE|Alu	179618	NM_134261	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr15-1873	chr15	61448255	61449255	+	14.7	1000	"intron (NM_134261, intron 1 of 10)"	"intron (NM_134261, intron 1 of 10)"	72747	NM_134261	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr15-1874	chr15	61465180	61466533	+	20.5	1353	"intron (NM_134261, intron 1 of 10)"	"intron (NM_134261, intron 1 of 10)"	55646	NM_134261	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr15-1876	chr15	61643478	61644775	+	16.6	1297	Intergenic	L2a|LINE|L2	-122624	NM_134261	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr15-1879	chr15	61768170	61769170	+	14.7	1000	Intergenic	MER5B|DNA|hAT-Charlie	-247168	NM_134261	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr15-1898	chr15	63211291	63212291	+	14.1	1000	Intergenic	MIRb|SINE|MIR	95635	NR_029709	406965		NR_029709	ENSG00000211137	MIR190A	MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a	microRNA 190a	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr15-1900	chr15	63271487	63272487	+	15.4	1000	Intergenic	Intergenic	-62851	NM_001018006	7168	Hs.133892	NM_000366	ENSG00000140416	TPM1	C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA	tropomyosin 1 (alpha)	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr15-1901	chr15	63291815	63292815	+	14.1	1000	Intergenic	Intergenic	-42523	NM_001018006	7168	Hs.133892	NM_000366	ENSG00000140416	TPM1	C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA	tropomyosin 1 (alpha)	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr15-1906	chr15	63642664	63643919	+	20.5	1255	"intron (NM_206925, intron 2 of 9)"	L1MC5|LINE|L1	31018	NM_001293642	771	Hs.210995	NM_001218	ENSG00000074410	CA12	CA-XII|CAXII|HsT18816|T18816	carbonic anhydrase 12	protein-coding	20.48	0.49	41.79591837	5.97E-21
chr15-1910	chr15	63677361	63678361	+	14.7	1000	Intergenic	Intergenic	-3496	NR_135511	771	Hs.210995	NM_001218	ENSG00000074410	CA12	CA-XII|CAXII|HsT18816|T18816	carbonic anhydrase 12	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr15-1913	chr15	65029596	65031682	+	34.6	2086	Intergenic	Intergenic	22777	NR_138364	348093	Hs.436518	NM_194272	ENSG00000166831	RBPMS2	-	RNA binding protein with multiple splicing 2	protein-coding	34.56	3.88	8.907216495	5.09E-17
chr15-1914	chr15	65038120	65039745	+	25.6	1625	"intron (NR_138350, intron 6 of 7)"	"intron (NR_138350, intron 6 of 7)"	14484	NR_138364	348093	Hs.436518	NM_194272	ENSG00000166831	RBPMS2	-	RNA binding protein with multiple splicing 2	protein-coding	25.6	5.82	4.39862543	7.99E-08
chr15-1916	chr15	65052048	65053048	+	15.4	1000	"intron (NR_138350, intron 1 of 7)"	"intron (NR_138350, intron 1 of 7)"	868	NR_138364	348093	Hs.436518	NM_194272	ENSG00000166831	RBPMS2	-	RNA binding protein with multiple splicing 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr15-1919	chr15	65498546	65499546	+	15.4	1000	"intron (NM_003613, intron 4 of 8)"	"intron (NM_003613, intron 4 of 8)"	4794	NM_003613	8483	Hs.442180	NM_003613	ENSG00000138615	CILP	CILP-1|HsT18872	cartilage intermediate layer protein	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr15-1920	chr15	65634371	65635371	+	15.4	1000	"intron (NM_004884, intron 2 of 13)"	MER3|DNA|hAT-Charlie	35507	NM_004884	9543	Hs.128292	NM_004884	ENSG00000174498	IGDCC3	HsT18880|PUNC	immunoglobulin superfamily DCC subclass member 3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr15-1924	chr15	65653037	65656519	+	41.6	3482	"intron (NM_004884, intron 2 of 13)"	"intron (NM_004884, intron 2 of 13)"	15600	NM_004884	9543	Hs.128292	NM_004884	ENSG00000174498	IGDCC3	HsT18880|PUNC	immunoglobulin superfamily DCC subclass member 3	protein-coding	41.61	6.8	6.119117647	3.54E-15
chr15-1930	chr15	66279138	66280138	+	15.4	1000	"intron (NM_032445, intron 5 of 22)"	"intron (NM_032445, intron 5 of 22)"	-52933	NR_036196	100422905		NR_036196	ENSG00000263512	MIR4311	-	microRNA 4311	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr15-1931	chr15	66324678	66325934	+	19.2	1256	"intron (NM_032445, intron 5 of 22)"	AluY|SINE|Alu	-7265	NR_036196	100422905		NR_036196	ENSG00000263512	MIR4311	-	microRNA 4311	ncRNA	19.2	2.43	7.901234568	1.91E-09
chr15-1936	chr15	66493148	66494148	+	14.7	1000	"intron (NM_032445, intron 1 of 22)"	"intron (NM_032445, intron 1 of 22)"	52427	NM_032445	84465	Hs.712886	NM_032445	ENSG00000157890	MEGF11	-	multiple EGF like domains 11	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr15-1937	chr15	66495723	66497985	+	34.6	2262	"intron (NM_032445, intron 1 of 22)"	"intron (NM_032445, intron 1 of 22)"	49221	NM_032445	84465	Hs.712886	NM_032445	ENSG00000157890	MEGF11	-	multiple EGF like domains 11	protein-coding	34.56	4.85	7.125773196	1.02E-14
chr15-1938	chr15	66509096	66510096	+	15.4	1000	"intron (NM_032445, intron 1 of 22)"	MIR3|SINE|MIR	36479	NM_032445	84465	Hs.712886	NM_032445	ENSG00000157890	MEGF11	-	multiple EGF like domains 11	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1939	chr15	66527575	66528895	+	20.5	1320	"intron (NM_032445, intron 1 of 22)"	L2b|LINE|L2	17840	NM_032445	84465	Hs.712886	NM_032445	ENSG00000157890	MEGF11	-	multiple EGF like domains 11	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr15-1941	chr15	66922258	66923702	+	17.9	1444	"intron (NR_110372, intron 1 of 4)"	L2b|LINE|L2	48452	NR_110372	102723165	Hs.636703	NR_110372	ENSG00000259471	LINC01169	-	long intergenic non-protein coding RNA 1169	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr15-1943	chr15	66933379	66934379	+	15.4	1000	"intron (NR_110372, intron 1 of 4)"	L1ME4a|LINE|L1	59351	NR_110372	102723165	Hs.636703	NR_110372	ENSG00000259471	LINC01169	-	long intergenic non-protein coding RNA 1169	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr15-1944	chr15	67114518	67115870	+	19.8	1352	Intergenic	Intergenic	120520	NR_027654	4091	Hs.153863	NM_005585	ENSG00000137834	SMAD6	AOVD2|HsT17432|MADH6|MADH7	SMAD family member 6	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr15-1948	chr15	67358310	67359310	+	15.4	1000	"intron (NM_005902, intron 1 of 8)"	CpG	615	NM_005902	4088	Hs.727986	NM_005902	ENSG00000166949	SMAD3	HSPC193|HsT17436|JV15-2|LDS1C|LDS3|MADH3	SMAD family member 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1950	chr15	67698097	67699097	+	14.7	1000	"non-coding (NR_040051, exon 6 of 6)"	"non-coding (NR_040051, exon 6 of 6)"	114714	NR_040055	100506686	Hs.656245	NR_040051	ENSG00000259673	IQCH-AS1	-	IQCH antisense RNA 1	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr15-1951	chr15	68113646	68114646	+	14.7	1000	"intron (NM_001258024, intron 1 of 14)"	"intron (NM_001258024, intron 1 of 14)"	2104	NM_001258024	390598	Hs.451224	NM_001031807	ENSG00000188779	SKOR1	CORL1|FUSSEL15|LBXCOR1	SKI family transcriptional corepressor 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr15-1956	chr15	68806602	68807602	+	15.4	1000	Intergenic	Intergenic	-3610	NM_001324014	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr15-1959	chr15	68872847	68873847	+	14.1	1000	"intron (NM_006091, intron 1 of 11)"	MIRb|SINE|MIR	2039	NM_006091	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding	14.08	0.49	28.73469388	3.99E-13
chr15-196	chr15	33932326	33933589	+	23.7	1263	"intron (NM_001243996, intron 27 of 102)"	"intron (NM_001243996, intron 27 of 102)"	-327558	NM_001320917	1133	Hs.584747	NM_012125	ENSG00000184984	CHRM5	HM5	cholinergic receptor muscarinic 5	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr15-1960	chr15	68897379	68898379	+	13.4	1000	"intron (NM_006091, intron 1 of 11)"	L1ME4a|LINE|L1	-11000	NM_001190456	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr15-1964	chr15	68970272	68971272	+	15.4	1000	"intron (NM_001190456, intron 2 of 11)"	AluSx1|SINE|Alu	36930	NM_001324015	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr15-1965	chr15	69174228	69175228	+	15.4	1000	"intron (NR_031680, intron 2 of 4)"	"intron (NR_031680, intron 2 of 4)"	-48111	NM_001184780	79400	Hs.657932	NM_024505	ENSG00000255346	NOX5	-	NADPH oxidase 5	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1976	chr15	69853631	69855637	+	31.4	2006	"intron (NR_026979, intron 1 of 4)"	L2b|LINE|L2	575	NR_026979	145837	Hs.410126	NR_026979		DRAIC	-	"downregulated RNA in cancer, inhibitor of cell invasion and migration"	ncRNA	31.36	4.85	6.465979381	3.34E-12
chr15-1977	chr15	69887766	69888766	+	14.7	1000	"intron (NR_126438, intron 1 of 3)"	"intron (NR_126438, intron 1 of 3)"	3727	NR_126437	104472713	Hs.430824	NR_126437	ENSG00000259641	PCAT29	-	prostate cancer associated transcript 29 (non-protein coding)	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr15-198	chr15	34406315	34407567	+	22.4	1252	Intergenic	LTR1D|LTR|ERV1	12667	NM_152595	161779	Hs.156317	NM_152595	ENSG00000182405	PGBD4	-	piggyBac transposable element derived 4	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr15-1984	chr15	70448240	70449966	+	25.6	1726	Intergenic	Intergenic	-58847	NM_001105192	7090	Hs.287362	NM_005078	ENSG00000140332	TLE3	ESG|ESG3|GRG3|HsT18976	transducin like enhancer of split 3	protein-coding	25.6	1.94	13.19587629	4.03E-16
chr15-1986	chr15	70723083	70724083	+	13.4	1000	Intergenic	Intergenic	155362	NR_135691	101929151	Hs.434703	NR_135691	ENSG00000280639	LOC101929151	-	uncharacterized LOC101929151	ncRNA	13.44	0	13.84477987	1.16E-11
chr15-199	chr15	35455515	35456790	+	24.3	1275	Intergenic	Intergenic	-73375	NR_003144	723972	Hs.631698	NR_003144	ENSG00000259516	ANP32AP1	-	acidic nuclear phosphoprotein 32 family member A pseudogene 1	pseudo	24.32	2.91	8.357388316	5.77E-12
chr15-1990	chr15	71135083	71136083	+	14.7	1000	"intron (NM_018357, intron 1 of 2)"	L2c|LINE|L2	-9995	NM_001284357	54839	Hs.12692	NM_017691	ENSG00000137821	LRRC49	PGs4	leucine rich repeat containing 49	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr15-1991	chr15	71804312	71805312	+	15.4	1000	"intron (NM_024817, intron 6 of 16)"	"intron (NM_024817, intron 6 of 16)"	-34729	NM_001286429	79875	Hs.387057	NM_024817	ENSG00000187720	THSD4	ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005	thrombospondin type 1 domain containing 4	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-1992	chr15	71859198	71860198	+	14.7	1000	"intron (NM_001286429, intron 1 of 11)"	LTR16C|LTR|ERVL	20157	NM_001286429	79875	Hs.387057	NM_024817	ENSG00000187720	THSD4	ADAMTSL-6|ADAMTSL6|FVSY9334|PRO34005	thrombospondin type 1 domain containing 4	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr15-1993	chr15	71998321	71999321	+	15.4	1000	"intron (NM_001286429, intron 2 of 11)"	L2c|LINE|L2	-14943	NR_120346	101929173	Hs.680593	NR_120346		THSD4-AS2	-	THSD4 antisense RNA 2	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr15-1996	chr15	72685319	72686319	+	14.7	1000	Intergenic	MIRb|SINE|MIR	-4849	NM_001080462	338949	Hs.446069	NM_001080462	ENSG00000187806	TMEM202	-	transmembrane protein 202	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr15-1998	chr15	73113844	73114844	+	14.1	1000	Intergenic	Intergenic	-38218	NM_031284	83440	Hs.562587	NM_031284	ENSG00000159322	ADPGK	2610017G09Rik|ADP-GK	ADP dependent glucokinase	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr15-2001	chr15	73193608	73194608	+	14.7	1000	Intergenic	Intergenic	-117982	NM_031284	83440	Hs.562587	NM_031284	ENSG00000159322	ADPGK	2610017G09Rik|ADP-GK	ADP dependent glucokinase	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr15-2004	chr15	73932879	73933879	+	14.1	1000	Intergenic	L2c|LINE|L2	-7626	NM_001161364	27020	Hs.744867	NM_012428	ENSG00000156642	NPTN	GP55|GP65|SDFR1|SDR1|np55|np65	neuroplastin	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr15-201	chr15	39809051	39810367	+	23.7	1316	Intergenic	Intergenic	-63571	NM_003246	7057	Hs.164226	NM_003246	ENSG00000137801	THBS1	THBS|THBS-1|TSP|TSP-1|TSP1	thrombospondin 1	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr15-2013	chr15	74591240	74593458	+	31.4	2218	"intron (NM_025055, intron 11 of 18)"	"intron (NM_025055, intron 11 of 18)"	-18533	NM_182791	80125	Hs.383206	NM_025055	ENSG00000140481	CCDC33	CT61|HP11097	coiled-coil domain containing 33	protein-coding	31.36	4.85	6.465979381	3.34E-12
chr15-2015	chr15	74651905	74653270	+	19.2	1365	"intron (NM_000781, intron 1 of 8)"	MER41-int|LTR|ERV1	-1306	NR_045207	729739	Hs.742028	NR_045207	ENSG00000260266	LOC729739	-	peptidylprolyl isomerase A (cyclophilin A) pseudogene	pseudo	19.2	3.88	4.948453608	7.67E-07
chr15-2018	chr15	75017981	75019484	+	23.7	1503	promoter-TSS (NM_001319216)	promoter-TSS (NM_001319216)	-781	NM_000499	1543	Hs.72912	NM_000499	ENSG00000140465	CYP1A1	AHH|AHRR|CP11|CYP1|CYPIA1|P1-450|P450-C|P450DX	cytochrome P450 family 1 subfamily A member 1	protein-coding	23.68	1.94	12.20618557	6.71E-14
chr15-2019	chr15	75245851	75252744	+	110.7	6893	"5' UTR (NM_017793, exon 1 of 1)"	"5' UTR (NM_017793, exon 1 of 1)"	478	NM_017793	54913	Hs.8562	NM_017793	ENSG00000178718	RPP25	-	ribonuclease P/MRP subunit p25	protein-coding	110.73	16.02	6.911985019	4.16E-42
chr15-2024	chr15	75993140	75994140	+	14.1	1000	"intron (NM_001897, intron 1 of 9)"	"intron (NM_001897, intron 1 of 9)"	11549	NM_001897	1464	Hs.513044	NM_001897	ENSG00000173546	CSPG4	HMW-MAA|MCSP|MCSPG|MEL-CSPG|MSK16|NG2	chondroitin sulfate proteoglycan 4	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr15-203	chr15	40006409	40007669	+	23	1260	"intron (NM_152597, intron 9 of 11)"	AluJb|SINE|Alu	68000	NM_152597	161835	Hs.129598	NM_152597	ENSG00000150667	FSIP1	HSD10	fibrous sheath interacting protein 1	protein-coding	23.04	4.37	5.272311213	2.46E-08
chr15-2031	chr15	76445382	76446382	+	14.1	1000	"intron (NM_152335, intron 3 of 10)"	"intron (NM_152335, intron 3 of 10)"	27945	NR_120360	101929439	Hs.631721	NR_120360	ENSG00000259422	LOC101929439	-	uncharacterized LOC101929439	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr15-2035	chr15	78001980	78003254	+	17.9	1274	"intron (NM_001301192, intron 2 of 4)"	"intron (NM_001301192, intron 2 of 4)"	-2768	NM_001301198	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr15-2037	chr15	78008968	78011760	+	51.8	2792	"intron (NM_001301192, intron 2 of 4)"	"intron (NM_001301192, intron 2 of 4)"	2729	NM_001301197	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding	51.85	6.8	7.625	6.93E-22
chr15-204	chr15	41220230	41223023	+	56.3	2793	promoter-TSS (NM_019074)	promoter-TSS (NM_019074)	95	NM_019074	54567	Hs.511076	NM_019074	ENSG00000128917	DLL4	AOS6|hdelta2	delta like canonical Notch ligand 4	protein-coding	56.33	3.88	14.51804124	3.11E-35
chr15-2042	chr15	78050078	78051396	+	17.9	1318	"intron (NM_001301186, intron 2 of 5)"	"intron (NM_001301186, intron 2 of 5)"	28619	NM_001301195	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr15-2043	chr15	78059673	78060673	+	14.7	1000	"intron (NM_001301186, intron 2 of 5)"	HAL1|LINE|L1	19183	NM_001301195	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr15-2046	chr15	78144311	78147337	+	41	3026	Intergenic	L1MB4|LINE|L1	-32582	NM_001301186	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding	40.97	6.31	6.492868463	4.76E-16
chr15-2050	chr15	78236664	78238383	+	23	1719	Intergenic	Intergenic	-18335	NR_027024	645752	Hs.546408	NR_027024		LOC645752	-	golgin A6 family member A pseudogene	pseudo	23.04	3.88	5.93814433	4.22E-09
chr15-2052	chr15	78260598	78261598	+	14.1	1000	Intergenic	HAL1|LINE|L1	25469	NR_026998	91450	Hs.406766	NR_026998		LOC91450	-	uncharacterized LOC91450	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr15-2057	chr15	78655423	78657031	+	23.7	1608	Intergenic	MIRb|SINE|MIR	23561	NM_004378	1381	Hs.346950	NM_004378	ENSG00000166426	CRABP1	CRABP|CRABP-I|CRABPI|RBP5	cellular retinoic acid binding protein 1	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr15-2060	chr15	78711183	78712183	+	15.4	1000	Intergenic	LTR8A|LTR|ERV1	-18835	NM_001320941	3658	Hs.436031	NM_004136	ENSG00000136381	IREB2	ACO3|IRP2|IRP2AD	iron responsive element binding protein 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-2061	chr15	78722145	78723145	+	14.1	1000	Intergenic	AluSz6|SINE|Alu	-7873	NM_001320941	3658	Hs.436031	NM_004136	ENSG00000136381	IREB2	ACO3|IRP2|IRP2AD	iron responsive element binding protein 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr15-2062	chr15	78932543	78933543	+	15.4	1000	"intron (NM_001256567, intron 1 of 4)"	"intron (NM_001256567, intron 1 of 4)"	544	NM_000750	1143	Hs.624178	NM_000750	ENSG00000117971	CHRNB4	-	cholinergic receptor nicotinic beta 4 subunit	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr15-2063	chr15	79101909	79103510	+	25	1601	"intron (NM_014272, intron 1 of 23)"	"intron (NM_014272, intron 1 of 23)"	1096	NM_014272	11173	Hs.16441	NM_014272	ENSG00000136378	ADAMTS7	ADAM-TS 7|ADAM-TS7|ADAMTS-7	ADAM metallopeptidase with thrombospondin type 1 motif 7	protein-coding	24.96	2.43	10.27160494	2.59E-13
chr15-2065	chr15	79143194	79144194	+	14.1	1000	Intergenic	MIR3|SINE|MIR	-21429	NM_001265603	10933	Hs.374503	NM_006791	ENSG00000185787	MORF4L1	Eaf3|FWP006|HsT17725|MEAF3|MORFRG15|MRG15|S863-6	mortality factor 4 like 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr15-2066	chr15	79416665	79417665	+	15.4	1000	Intergenic	MLT1H2|LTR|ERVL-MaLR	-33950	NM_002891	5923	Hs.459035	NM_002891	ENSG00000058335	RASGRF1	CDC25|CDC25L|GNRP|GRF1|GRF55|H-GRF55|PP13187|ras-GRF1	Ras protein specific guanine nucleotide releasing factor 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr15-2070	chr15	79512996	79513996	+	14.7	1000	"intron (NR_038997, intron 1 of 1)"	"intron (NR_038997, intron 1 of 1)"	11366	NR_029705	406960		NR_029705	ENSG00000207695	MIR184	EDICT|MIRN184|miR-184	microRNA 184	ncRNA	14.72	0.49	30.04081633	3.99E-13
chr15-2071	chr15	79537242	79538242	+	13.4	1000	"intron (NR_038997, intron 1 of 1)"	"intron (NR_038997, intron 1 of 1)"	35612	NR_029705	406960		NR_029705	ENSG00000207695	MIR184	EDICT|MIRN184|miR-184	microRNA 184	ncRNA	13.44	0.97	13.8556701	8.12E-09
chr15-2072	chr15	80544607	80545607	+	13.4	1000	promoter-TSS (NR_120317)	promoter-TSS (NR_120317)	-504	NR_120317	100996492	Hs.20034	NR_120317	ENSG00000259417	LINC01314	-	long intergenic non-protein coding RNA 1314	ncRNA	13.44	2.43	5.530864198	2.99E-05
chr15-2074	chr15	80570418	80571418	+	14.7	1000	"intron (NR_033833, intron 2 of 2)"	"intron (NR_033833, intron 2 of 2)"	-26315	NR_120317	100996492	Hs.20034	NR_120317	ENSG00000259417	LINC01314	-	long intergenic non-protein coding RNA 1314	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr15-2077	chr15	81145945	81146945	+	15.4	1000	"intron (NM_018689, intron 1 of 28)"	"intron (NM_018689, intron 1 of 28)"	-12031	NR_030393	693132		NR_030393	ENSG00000208003	MIR549A	MIR549|MIRN549|hsa-mir-549|hsa-mir-549a|mir-549a	microRNA 549a	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr15-2079	chr15	81152598	81155281	+	44.8	2683	"intron (NM_018689, intron 1 of 28)"	"intron (NM_018689, intron 1 of 28)"	-19525	NR_030393	693132		NR_030393	ENSG00000208003	MIR549A	MIR549|MIRN549|hsa-mir-549|hsa-mir-549a|mir-549a	microRNA 549a	ncRNA	44.81	4.37	10.25400458	1.60E-23
chr15-2082	chr15	81651405	81652405	+	14.1	1000	"intron (NM_001080532, intron 4 of 21)"	"intron (NM_001080532, intron 4 of 21)"	14513	NM_001080532	342125	Hs.253489	NM_001080532	ENSG00000188869	TMC3	-	transmembrane channel like 3	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr15-2083	chr15	81837449	81838449	+	15.4	1000	Intergenic	L1MC3|LINE|L1	-171531	NM_001080532	342125	Hs.253489	NM_001080532	ENSG00000188869	TMC3	-	transmembrane channel like 3	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr15-2086	chr15	83541968	83542968	+	15.4	1000	"intron (NM_199330, intron 3 of 8)"	ERVL-int|LTR|ERVL	64088	NM_001080435	123720	Hs.377360	NM_001080435	ENSG00000156232	WHAMM	WHAMM1|WHDC1	"WAS protein homolog associated with actin, golgi membranes and microtubules"	protein-coding	15.36	0	15.82260557	1.26E-14
chr15-2093	chr15	84686417	84687417	+	14.7	1000	"intron (NM_001301110, intron 25 of 29)"	"intron (NM_001301110, intron 25 of 29)"	-62022	NR_036652	648809	Hs.585157	NR_036652		EFTUD1P1	FAM42B|HsT19321	elongation factor Tu GTP binding domain containing 1 pseudogene 1	pseudo	14.72	2.91	5.058419244	2.67E-05
chr15-2094	chr15	85436886	85437886	+	15.4	1000	"intron (NM_001321722, intron 5 of 18)"	AluSx1|SINE|Alu	9494	NM_001287761	9154	Hs.459187	NM_004213	ENSG00000156222	SLC28A1	CNT1|HCNT1	solute carrier family 28 member 1	protein-coding	15.36	0	15.82260557	1.26E-14
chr15-2097	chr15	88577957	88580543	+	32	2586	"intron (NM_001007156, intron 13 of 15)"	HAL1|LINE|L1	169955	NM_001320135	4916	Hs.185701	NM_002530	ENSG00000140538	NTRK3	GP145-TrkC|TRKC|gp145(trkC)	neurotrophic receptor tyrosine kinase 3	protein-coding	32	6.8	4.705882353	5.32E-10
chr15-2101	chr15	88814390	88815664	+	20.5	1274	TTS (NR_038229)	TTS (NR_038229)	-15065	NM_001012338	4916	Hs.185701	NM_002530	ENSG00000140538	NTRK3	GP145-TrkC|TRKC|gp145(trkC)	neurotrophic receptor tyrosine kinase 3	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr15-2102	chr15	88819455	88820455	+	13.4	1000	Intergenic	Intergenic	-19993	NM_001012338	4916	Hs.185701	NM_002530	ENSG00000140538	NTRK3	GP145-TrkC|TRKC|gp145(trkC)	neurotrophic receptor tyrosine kinase 3	protein-coding	13.44	2.43	5.530864198	2.99E-05
chr15-2103	chr15	88876675	88877675	+	15.4	1000	Intergenic	Intergenic	-77213	NM_001012338	4916	Hs.185701	NM_002530	ENSG00000140538	NTRK3	GP145-TrkC|TRKC|gp145(trkC)	neurotrophic receptor tyrosine kinase 3	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr15-2105	chr15	89297619	89298619	+	15.4	1000	Intergenic	MSTA|LTR|ERVL-MaLR	-48555	NM_001135	176	Hs.2159	NM_001135	ENSG00000157766	ACAN	AGC1|AGCAN|CSPG1|CSPGCP|MSK16|SEDK	aggrecan	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-2107	chr15	89378844	89379844	+	14.1	1000	"intron (NM_013227, intron 1 of 17)"	"intron (NM_013227, intron 1 of 17)"	32670	NM_013227	176	Hs.2159	NM_001135	ENSG00000157766	ACAN	AGC1|AGCAN|CSPG1|CSPGCP|MSK16|SEDK	aggrecan	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr15-2113	chr15	89948665	89951141	+	35.2	2476	Intergenic	CpG	28630	NR_015411	254559	Hs.136313	NR_015411	ENSG00000255571	MIR9-3HG	LINC00925	MIR9-3 host gene	ncRNA	35.2	3.88	9.072164948	5.09E-17
chr15-2118	chr15	90215450	90216450	+	15.4	1000	"intron (NM_001145311, intron 3 of 8)"	"intron (NM_001145311, intron 3 of 8)"	6698	NM_001145311	5346	Hs.103253	NM_002666	ENSG00000166819	PLIN1	FPLD4|PERI|PLIN	perilipin 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-2122	chr15	90244563	90246180	+	25.6	1617	"intron (NM_001284395, intron 2 of 16)"	"intron (NM_001284395, intron 2 of 16)"	11343	NM_001284396	56964	Hs.177557	NM_020212	ENSG00000140527	WDR93	-	WD repeat domain 93	protein-coding	25.6	4.37	5.85812357	7.40E-10
chr15-2126	chr15	90444416	90445416	+	15.4	1000	"3' UTR (NM_001282380, exon 6 of 6)"	"3' UTR (NM_001282380, exon 6 of 6)"	-7299	NR_037582	10239	Hs.632161	NM_005829	ENSG00000157823	AP3S2	AP3S3|sigma3b	adaptor related protein complex 3 sigma 2 subunit	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr15-2129	chr15	90476808	90477808	+	15.4	1000	Intergenic	AluSz|SINE|Alu	-21086	NM_001199058	100526783	Hs.744890	NM_001199058	ENSG00000250021	C15orf38-AP3S2	-	C15orf38-AP3S2 readthrough	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr15-2132	chr15	90714430	90715430	+	16	1000	Intergenic	AluJr|SINE|Alu	-13222	NM_001324030	10509	Hs.474935	NM_020210	ENSG00000185033	SEMA4B	SEMAC|SemC	semaphorin 4B	protein-coding	16	0.97	16.49484536	3.54E-11
chr15-2133	chr15	91199719	91200719	+	14.1	1000	"intron (NR_120372, intron 2 of 3)"	AluJb|SINE|Alu	-3246	NR_120371	101929765	Hs.615348	NR_120371	ENSG00000245479	LINC01585	-	long intergenic non-protein coding RNA 1585	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr15-2138	chr15	91743598	91744598	+	14.7	1000	"intron (NM_001323040, intron 2 of 12)"	AluJr|SINE|Alu	99212	NM_001323040	9899	Hs.21754	NM_014848	ENSG00000185518	SV2B	HsT19680	synaptic vesicle glycoprotein 2B	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr15-2139	chr15	91753141	91755087	+	39.7	1946	"intron (NM_001323040, intron 2 of 12)"	L2b|LINE|L2	109228	NM_001323040	9899	Hs.21754	NM_014848	ENSG00000185518	SV2B	HsT19680	synaptic vesicle glycoprotein 2B	protein-coding	39.69	1.94	20.45876289	1.13E-29
chr15-2141	chr15	91794183	91795183	+	15.4	1000	"intron (NM_001323033, intron 2 of 10)"	"intron (NM_001323033, intron 2 of 10)"	149797	NM_001323040	9899	Hs.21754	NM_014848	ENSG00000185518	SV2B	HsT19680	synaptic vesicle glycoprotein 2B	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr15-2143	chr15	92778712	92779712	+	15.4	1000	Intergenic	HUERS-P1-int|LTR|ERV1	-157905	NM_001330416	8128	Hs.302341	NM_006011	ENSG00000140557	ST8SIA2	HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX	"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-2145	chr15	92816958	92817958	+	14.7	1000	Intergenic	Intergenic	-119659	NM_001330416	8128	Hs.302341	NM_006011	ENSG00000140557	ST8SIA2	HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX	"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2"	protein-coding	14.72	0	15.16333034	3.99E-13
chr15-2147	chr15	92956399	92957399	+	14.7	1000	"intron (NM_001330416, intron 1 of 4)"	"intron (NM_001330416, intron 1 of 4)"	19759	NM_006011	8128	Hs.302341	NM_006011	ENSG00000140557	ST8SIA2	HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX	"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr15-2148	chr15	92960032	92961032	+	15.4	1000	"intron (NM_001330416, intron 1 of 4)"	"intron (NM_001330416, intron 1 of 4)"	23392	NM_006011	8128	Hs.302341	NM_006011	ENSG00000140557	ST8SIA2	HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX	"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2"	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr15-2151	chr15	93019315	93020315	+	15.4	1000	"intron (NM_001301106, intron 2 of 2)"	"intron (NM_001301106, intron 2 of 2)"	4908	NM_001301106	145858	Hs.367879	NM_153040		C15orf32	-	chromosome 15 open reading frame 32	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-2156	chr15	95123019	95125423	+	39	2404	Intergenic	(CAGAGA)n|Simple_repeat|Simple_repeat	225057	NM_001159644	55784	Hs.33368	NM_018349	ENSG00000140563	MCTP2	-	multiple C2 and transmembrane domain containing 2	protein-coding	39.04	8.74	4.466819222	5.52E-11
chr15-2159	chr15	95190272	95191272	+	15.4	1000	Intergenic	L2|LINE|L2	-207820	NR_077061	440311	Hs.745156	NR_077061	ENSG00000260521	LOC440311	-	glioma tumor suppressor candidate region gene 2 pseudogene	pseudo	15.36	2.91	5.278350515	4.98E-06
chr15-2166	chr15	95997231	95998231	+	15.4	1000	"intron (NR_027133, intron 3 of 5)"	"intron (NR_027133, intron 3 of 5)"	21409	NR_027132	145820	Hs.652702	NR_027132	ENSG00000259134	LINC00924	-	long intergenic non-protein coding RNA 924	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr15-2168	chr15	96139670	96140670	+	15.4	1000	Intergenic	Intergenic	163848	NR_027132	145820	Hs.652702	NR_027132	ENSG00000259134	LINC00924	-	long intergenic non-protein coding RNA 924	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr15-2176	chr15	96901149	96902149	+	14.1	1000	Intergenic	Intergenic	25080	NM_001145157	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr15-2180	chr15	97011361	97012361	+	15.4	1000	Intergenic	Intergenic	135292	NM_001145157	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr15-2186	chr15	98835670	98836950	+	19.2	1280	Intergenic	Intergenic	-204328	NR_120325	101927332		NR_120325		LINC01582	-	long intergenic non-protein coding RNA 1582	ncRNA	19.2	2.43	7.901234568	1.91E-09
chr15-2188	chr15	98860787	98861787	+	14.7	1000	Intergenic	AluSx|SINE|Alu	196324	NM_182562	283777	Hs.668070	NM_182562	ENSG00000185087	FAM169B	-	family with sequence similarity 169 member B	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr15-2189	chr15	99135035	99136035	+	14.1	1000	Intergenic	Intergenic	-56233	NM_000875	3480	Hs.643120	NM_000875	ENSG00000140443	IGF1R	CD221|IGFIR|IGFR|JTK13	insulin like growth factor 1 receptor	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr15-2190	chr15	99611462	99612462	+	14.7	1000	Intergenic	MIRc|SINE|MIR	-33324	NM_015286	23336	Hs.207106	NM_015286	ENSG00000182253	SYNM	DMN|SYN	synemin	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr15-2192	chr15	99659568	99660568	+	15.4	1000	"intron (NM_145728, intron 3 of 4)"	L1ME2z|LINE|L1	14782	NM_145728	23336	Hs.207106	NM_015286	ENSG00000182253	SYNM	DMN|SYN	synemin	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr15-2193	chr15	100081191	100082191	+	14.7	1000	Intergenic	AluSz6|SINE|Alu	-24442	NM_001130927	4205	Hs.268675	NM_005587	ENSG00000068305	MEF2A	ADCAD1|RSRFC4|RSRFC9|mef2	myocyte enhancer factor 2A	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr15-2194	chr15	100950770	100951770	+	14.1	1000	"intron (NR_120374, intron 3 of 4)"	L1MB3|LINE|L1	38126	NR_120374	102723320	Hs.416099	NR_120374		CERS3-AS1	-	CERS3 antisense RNA 1	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr15-2197	chr15	101298743	101299743	+	15.4	1000	Intergenic	Intergenic	-120654	NM_000693	220	Hs.459538	NM_000693	ENSG00000184254	ALDH1A3	ALDH1A6|ALDH6|MCOP8|RALDH3	aldehyde dehydrogenase 1 family member A3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr15-2198	chr15	101340274	101341274	+	14.1	1000	Intergenic	Intergenic	-79123	NM_000693	220	Hs.459538	NM_000693	ENSG00000184254	ALDH1A3	ALDH1A6|ALDH6|MCOP8|RALDH3	aldehyde dehydrogenase 1 family member A3	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr15-22	chr15	99558336	99560136	+	41.6	1800	"intron (NR_126487, intron 1 of 3)"	"intron (NR_126487, intron 1 of 3)"	1303	NR_126487	104564224	Hs.32769	NR_126487		LUNAR1	-	leukemia-associated non-coding IGF1R activator RNA 1	ncRNA	41.61	1.46	28.5	7.78E-35
chr15-2206	chr15	101602385	101603385	+	15.4	1000	"exon (NM_024652, exon 31 of 34)"	"exon (NM_024652, exon 31 of 34)"	-143397	NR_135828	101927751	Hs.659224	NR_135827	ENSG00000259583	LOC101927751	-	uncharacterized LOC101927751	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr15-2209	chr15	101866275	101867645	+	22.4	1370	"intron (NM_138319, intron 15 of 21)"	"intron (NM_138319, intron 15 of 21)"	-7682	NR_132373	105371027		NR_132373	ENSG00000259764	PCSK6-AS1	-	PCSK6 antisense RNA 1	ncRNA	22.4	2.91	7.697594502	3.87E-10
chr15-2214	chr15	101888351	101890253	+	27.5	1902	"intron (NM_138323, intron 14 of 14)"	"intron (NM_138323, intron 14 of 14)"	14660	NR_132373	105371027		NR_132373	ENSG00000259764	PCSK6-AS1	-	PCSK6 antisense RNA 1	ncRNA	27.52	3.4	8.094117647	1.25E-12
chr15-2215	chr15	101898572	101899572	+	12.8	1000	"intron (NM_138323, intron 14 of 14)"	"intron (NM_138323, intron 14 of 14)"	24430	NR_132373	105371027		NR_132373	ENSG00000259764	PCSK6-AS1	-	PCSK6 antisense RNA 1	ncRNA	12.8	1.46	8.767123288	3.57E-07
chr15-2219	chr15	102065851	102069291	+	47.4	3440	Intergenic	AluJo|SINE|Alu	-37384	NM_138322	5046	Hs.498494	NM_002570	ENSG00000140479	PCSK6	PACE4|SPC4	proprotein convertase subtilisin/kexin type 6	protein-coding	47.37	8.25	5.741818182	1.22E-16
chr15-222	chr15	74174658	74175918	+	21.8	1260	"intron (NM_153356, intron 3 of 10)"	"intron (NM_153356, intron 3 of 10)"	9361	NM_001286434	161514	Hs.124512	NM_153356	ENSG00000167139	TBC1D21	MgcRabGAP	TBC1 domain family member 21	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr15-223	chr15	74429185	74430185	+	21.1	1000	TTS (NM_020851)	TTS (NM_020851)	6942	NM_020851	57611	Hs.254775	NM_020851	ENSG00000167178	ISLR2	LINX	immunoglobulin superfamily containing leucine rich repeat 2	protein-coding	21.12	0.49	43.10204082	5.97E-21
chr15-230	chr15	78062658	78064448	+	28.8	1790	"intron (NM_001301186, intron 2 of 5)"	"intron (NM_001301186, intron 2 of 5)"	15803	NM_001301195	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding	28.8	4.85	5.93814433	1.30E-10
chr15-231	chr15	78126307	78128322	+	35.8	2015	Intergenic	Intergenic	-14072	NM_001301186	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding	35.84	4.37	8.201372998	1.03E-16
chr15-238	chr15	89904156	89905156	+	20.5	1000	promoter-TSS (NR_133001)	promoter-TSS (NR_133001)	-154	NR_133001	254559	Hs.136313	NR_015411	ENSG00000255571	MIR9-3HG	LINC00925	MIR9-3 host gene	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr15-24	chr15	40574306	40575819	+	35.8	1513	promoter-TSS (NM_001190479)	promoter-TSS (NM_001190479)	-275	NM_001190479	100131244	Hs.711376	NM_001190479	ENSG00000230778	ANKRD63	-	ankyrin repeat domain 63	protein-coding	35.84	2.91	12.3161512	3.62E-21
chr15-246	chr15	99415872	99417150	+	25	1278	"intron (NM_000875, intron 2 of 20)"	"intron (NM_000875, intron 2 of 20)"	88856	NR_039864	100616432		NR_039864	ENSG00000264480	MIR4714	-	microRNA 4714	ncRNA	24.96	3.88	6.432989691	6.68E-10
chr15-247	chr15	101270157	101271419	+	23	1262	Intergenic	MER102b|DNA|hAT-Charlie	128033	NM_198243	140460	Hs.31845	NM_024708	ENSG00000183475	ASB7	-	ankyrin repeat and SOCS box containing 7	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr15-260	chr15	28351689	28353300	+	27.5	1611	Intergenic	CpG	-8036	NM_000275	4948	Hs.654411	NM_000275	ENSG00000104044	OCA2	BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1	OCA2 melanosomal transmembrane protein	protein-coding	27.52	1.94	14.18556701	2.90E-17
chr15-27	chr15	21928074	21929074	+	27.5	1000	Intergenic	LTR9|LTR|ERV1	12165	NR_027053	646214	Hs.510697	NR_027053		LOC646214	-	p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene	pseudo	27.52	5.34	5.153558052	3.94E-09
chr15-271	chr15	41802733	41805032	+	39	2299	"intron (NM_001135685, intron 5 of 17)"	CpG-7793	2203	NM_001135685	4058	Hs.434481	NM_002344	ENSG00000062524	LTK	TYK1	leukocyte receptor tyrosine kinase	protein-coding	39.04	7.28	5.362637363	6.93E-13
chr15-272	chr15	45422995	45423995	+	19.8	1000	"intron (NM_175940, intron 1 of 33)"	"intron (NM_175940, intron 1 of 33)"	1303	NM_175940	53905	Hs.272813	NM_017434	ENSG00000137857	DUOX1	LNOX1|NOXEF1|THOX1	dual oxidase 1	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr15-280	chr15	68870212	68871212	+	19.2	1000	promoter-TSS (NM_006091)	promoter-TSS (NM_006091)	-596	NM_006091	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding	19.2	0.49	39.18367347	2.52E-19
chr15-281	chr15	70025267	70027802	+	48	2535	Intergenic	L2b|LINE|L2	-101039	NR_026764	414926	Hs.569502	NR_026764	ENSG00000259703	LINC00593	C15orf50	long intergenic non-protein coding RNA 593	ncRNA	48.01	7.77	6.178893179	1.86E-17
chr15-283	chr15	70875854	70877491	+	28.2	1637	"intron (NR_135691, intron 1 of 1)"	"intron (NR_135691, intron 1 of 1)"	2273	NR_135691	101929151	Hs.434703	NR_135691	ENSG00000280639	LOC101929151	-	uncharacterized LOC101929151	ncRNA	28.16	2.91	9.676975945	7.24E-15
chr15-285	chr15	74547144	74548408	+	22.4	1264	"intron (NM_025055, intron 2 of 18)"	"intron (NM_025055, intron 2 of 18)"	19146	NM_025055	80125	Hs.383206	NM_025055	ENSG00000140481	CCDC33	CT61|HP11097	coiled-coil domain containing 33	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr15-286	chr15	78155682	78160728	+	68.5	5046	Intergenic	Intergenic	-44963	NM_001301186	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding	68.49	10.68	6.412921348	4.41E-25
chr15-287	chr15	78495577	78496875	+	22.4	1298	"intron (NM_015162, intron 2 of 13)"	"intron (NM_015162, intron 2 of 13)"	30823	NM_001199377	23205	Hs.655760	NM_015162	ENSG00000103740	ACSBG1	BG|BG1|BGM|GR-LACS|LPD	acyl-CoA synthetase bubblegum family member 1	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr15-289	chr15	82341201	82342201	+	19.8	1000	Intergenic	Intergenic	-3217	NM_032246	84206	Hs.104744	NM_032246	ENSG00000183496	MEX3B	MEX-3B|RKHD3|RNF195	mex-3 RNA binding family member B	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr15-290	chr15	85489655	85490655	+	19.8	1000	"intron (NM_001321722, intron 18 of 18)"	"intron (NM_001321722, intron 18 of 18)"	-33589	NM_001243137	5151	Hs.9333	NM_002605	ENSG00000073417	PDE8A	HsT19550	phosphodiesterase 8A	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr15-293	chr15	90221617	90222617	+	19.8	1000	"intron (NM_001145311, intron 1 of 8)"	AluJb|SINE|Alu	531	NM_001145311	5346	Hs.103253	NM_002666	ENSG00000166819	PLIN1	FPLD4|PERI|PLIN	perilipin 1	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr15-294	chr15	95142904	95144180	+	23	1276	Intergenic	Intergenic	244378	NM_001159644	55784	Hs.33368	NM_018349	ENSG00000140563	MCTP2	-	multiple C2 and transmembrane domain containing 2	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr15-300	chr15	99270858	99272214	+	21.8	1356	"intron (NM_000875, intron 2 of 20)"	"intron (NM_000875, intron 2 of 20)"	-56119	NR_039864	100616432		NR_039864	ENSG00000264480	MIR4714	-	microRNA 4714	ncRNA	21.76	2.91	7.47766323	3.87E-10
chr15-321	chr15	42371950	42374143	+	37.8	2193	"intron (NM_178034, intron 12 of 19)"	"intron (NM_178034, intron 12 of 19)"	13706	NM_178034	283748	Hs.380225	NM_178034	ENSG00000159337	PLA2G4D	cPLA2delta	phospholipase A2 group IVD	protein-coding	37.76	7.77	4.85971686	1.66E-11
chr15-324	chr15	58204416	58205687	+	21.8	1271	Intergenic	Intergenic	101244	NM_170697	8854	Hs.643455	NM_003888	ENSG00000128918	ALDH1A2	RALDH(II)|RALDH2|RALDH2-T	aldehyde dehydrogenase 1 family member A2	protein-coding	21.76	2.43	8.95473251	2.49E-11
chr15-326	chr15	61347066	61348066	+	19.2	1000	"intron (NM_134261, intron 1 of 10)"	"intron (NM_134261, intron 1 of 10)"	173936	NM_134261	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr15-327	chr15	61694992	61696243	+	17.9	1251	Intergenic	LTR67B|LTR|ERVL	-174115	NM_134261	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr15-329	chr15	62630636	62631904	+	21.1	1268	Intergenic	Intergenic	-3958	NR_106733	102464834		NR_106733	ENSG00000275451	MIR6085	hsa-mir-6085	microRNA 6085	ncRNA	21.12	3.88	5.443298969	1.44E-07
chr15-330	chr15	62801447	62802447	+	18.6	1000	Intergenic	Intergenic	135433	NR_026897	197003	Hs.352253	NM_152648	ENSG00000259458	MGC15885	-	uncharacterized protein MGC15885	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr15-331	chr15	66381935	66382935	+	19.2	1000	"intron (NM_032445, intron 5 of 22)"	"intron (NM_032445, intron 5 of 22)"	49864	NR_036196	100422905		NR_036196	ENSG00000263512	MIR4311	-	microRNA 4311	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr15-332	chr15	66396891	66398436	+	26.9	1545	"intron (NM_032445, intron 4 of 22)"	"intron (NM_032445, intron 4 of 22)"	65092	NR_036196	100422905		NR_036196	ENSG00000263512	MIR4311	-	microRNA 4311	ncRNA	26.88	0.97	27.71134021	2.75E-23
chr15-335	chr15	67133377	67138457	+	89	5080	Intergenic	L2a|LINE|L2	112936	NR_135687	102723481	Hs.512978	NR_135687	ENSG00000259289	LOC102723481	-	uncharacterized LOC102723481	ncRNA	88.97	16.99	5.23660977	3.75E-27
chr15-336	chr15	68905680	68906680	+	18.6	1000	"intron (NM_006091, intron 1 of 11)"	Charlie20a|DNA|hAT-Charlie	-2699	NM_001190456	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr15-337	chr15	68944068	68945068	+	18.6	1000	"intron (NM_001190456, intron 2 of 11)"	"intron (NM_001190456, intron 2 of 11)"	10726	NM_001324015	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr15-344	chr15	77842927	77845290	+	40.3	2363	Intergenic	Intergenic	26171	NR_135692	101929457	Hs.637111	NR_135692	ENSG00000259362	LOC101929457	-	uncharacterized LOC101929457	ncRNA	40.33	5.34	7.552434457	3.64E-17
chr15-345	chr15	77961401	77962401	+	19.2	1000	"intron (NM_001301195, intron 3 of 3)"	L2c|LINE|L2	9508	NR_120361	101929478	Hs.569510	NR_120361	ENSG00000259281	LINGO1-AS2	-	LINGO1 antisense RNA 2	ncRNA	19.2	3.4	5.647058824	1.47E-07
chr15-348	chr15	78629633	78631247	+	26.9	1614	Intergenic	Intergenic	-2226	NM_004378	1381	Hs.346950	NM_004378	ENSG00000166426	CRABP1	CRABP|CRABP-I|CRABPI|RBP5	cellular retinoic acid binding protein 1	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr15-351	chr15	83990126	83991427	+	21.8	1301	Intergenic	Intergenic	-37308	NM_001717	646	Hs.459153	NM_001717	ENSG00000169594	BNC1	BNC|BSN1|HsT19447	basonuclin 1	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr15-352	chr15	89465145	89466561	+	22.4	1416	Intergenic	AluSx3|SINE|Alu	-9153	NM_001310320	4240	Hs.3745	NM_005928	ENSG00000140545	MFGE8	BA46|EDIL1|HMFG|HsT19888|MFG-E8|MFGM|OAcGD3S|SED1|SPAG10|hP47	milk fat globule-EGF factor 8 protein	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr15-353	chr15	89909253	89910506	+	22.4	1253	"intron (NR_133002, intron 1 of 5)"	"intron (NR_133002, intron 1 of 5)"	-1369	NR_029692	407051		NR_029692	ENSG00000255571	MIR9-3	MIRN9-3|hsa-mir-9-3|miRNA9-3|mir-9-3	microRNA 9-3	ncRNA	22.4	4.37	5.125858124	1.32E-07
chr15-360	chr15	93012253	93013531	+	23	1278	TTS (NR_126501)	TTS (NR_126501)	1884	NR_126501	104613533	Hs.97584	NR_126501	ENSG00000259170	LOC104613533	-	uncharacterized LOC104613533	ncRNA	23.04	4.85	4.750515464	1.15E-07
chr15-364	chr15	96856275	96857275	+	19.8	1000	"intron (NR_102744, intron 1 of 1)"	"intron (NR_102744, intron 1 of 1)"	-12382	NM_001145155	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr15-367	chr15	101869279	101872335	+	41	3056	"intron (NM_138319, intron 15 of 21)"	"intron (NM_138319, intron 15 of 21)"	-3835	NR_132373	105371027		NR_132373	ENSG00000259764	PCSK6-AS1	-	PCSK6 antisense RNA 1	ncRNA	40.97	9.22	4.443600868	9.99E-12
chr15-382	chr15	26106384	26107668	+	23	1284	"intron (NM_024490, intron 1 of 20)"	"intron (NM_024490, intron 1 of 20)"	1323	NM_024490	57194	Hs.638517	NM_024490	ENSG00000206190	ATP10A	ATP10C|ATPVA|ATPVC	ATPase phospholipid transporting 10A (putative)	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr15-385	chr15	32096672	32097970	+	19.8	1298	"intron (NM_001329907, intron 1 of 10)"	"intron (NM_001329907, intron 1 of 10)"	65554	NM_001329907	161725	Hs.355236	NM_130901	ENSG00000169918	OTUD7A	C15orf16|C16ORF15|CEZANNE2|OTUD7	OTU deubiquitinase 7A	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr15-39	chr15	91642396	91645714	+	67.2	3318	promoter-TSS (NM_001323036)	promoter-TSS (NM_001323036)	-43	NM_001323036	9899	Hs.21754	NM_014848	ENSG00000185518	SV2B	HsT19680	synaptic vesicle glycoprotein 2B	protein-coding	67.21	14.56	4.616071429	1.47E-18
chr15-394	chr15	41135125	41136125	+	19.2	1000	promoter-TSS (NM_003710)	promoter-TSS (NM_003710)	-621	NM_003710	6692	Hs.233950	NM_003710	ENSG00000166145	SPINT1	HAI|HAI1|MANSC2	"serine peptidase inhibitor, Kunitz type 1"	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr15-396	chr15	41877168	41880329	+	42.2	3161	Intergenic	AluSx1|SINE|Alu	26578	NM_001330264	7301	Hs.381282	NM_006293	ENSG00000092445	TYRO3	BYK|Dtk|Etk-2|RSE|Rek|Sky|Tif	TYRO3 protein tyrosine kinase	protein-coding	42.25	6.8	6.213235294	5.66E-16
chr15-397	chr15	42388995	42389995	+	19.2	1000	Intergenic	Intergenic	-2743	NM_178034	283748	Hs.380225	NM_178034	ENSG00000159337	PLA2G4D	cPLA2delta	phospholipase A2 group IVD	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr15-398	chr15	52557095	52558644	+	26.2	1549	"intron (NM_018728, intron 8 of 40)"	AluJb|SINE|Alu	11528	NR_031670	100302202		NR_031670	ENSG00000221052	MIR1266	MIRN1266|hsa-mir-1266|mir-1266	microRNA 1266	ncRNA	26.24	4.85	5.410309278	4.26E-09
chr15-416	chr15	63130150	63131407	+	20.5	1257	"intron (NM_015059, intron 54 of 55)"	"intron (NM_015059, intron 54 of 55)"	14622	NR_029709	406965		NR_029709	ENSG00000211137	MIR190A	MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a	microRNA 190a	ncRNA	20.48	2.43	8.427983539	2.25E-10
chr15-418	chr15	63305951	63307287	+	21.8	1336	Intergenic	L2|LINE|L2	-28219	NM_001018006	7168	Hs.133892	NM_000366	ENSG00000140416	TPM1	C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA	tropomyosin 1 (alpha)	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr15-420	chr15	63672488	63675154	+	37.1	2666	"intron (NM_206925, intron 1 of 9)"	"intron (NM_206925, intron 1 of 9)"	488	NM_001293642	771	Hs.210995	NM_001218	ENSG00000074410	CA12	CA-XII|CAXII|HsT18816|T18816	carbonic anhydrase 12	protein-coding	37.12	6.8	5.458823529	7.17E-13
chr15-423	chr15	65323335	65324335	+	19.2	1000	Intergenic	AluSx1|SINE|Alu	-1858	NM_139242	123263	Hs.531615	NM_139242	ENSG00000103707	MTFMT	COXPD15|FMT1	mitochondrial methionyl-tRNA formyltransferase	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr15-424	chr15	65680092	65682738	+	49.9	2646	"intron (NM_020962, intron 14 of 19)"	"intron (NM_020962, intron 14 of 19)"	-11037	NM_004884	9543	Hs.128292	NM_004884	ENSG00000174498	IGDCC3	HsT18880|PUNC	immunoglobulin superfamily DCC subclass member 3	protein-coding	49.93	9.22	5.415401302	1.24E-16
chr15-43	chr15	38196070	38197070	+	24.3	1000	Intergenic	Intergenic	-30238	NM_001330255	145942	Hs.179646	NM_152453	ENSG00000166069	TMCO5A	TMCO5	transmembrane and coiled-coil domains 5A	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr15-430	chr15	67173131	67174131	+	19.2	1000	Intergenic	L2c|LINE|L2	75222	NR_135687	102723481	Hs.512978	NR_135687	ENSG00000259289	LOC102723481	-	uncharacterized LOC102723481	ncRNA	19.2	2.43	7.901234568	1.91E-09
chr15-433	chr15	68834259	68835259	+	17.9	1000	"intron (NM_001324014, intron 2 of 12)"	MLT1I-int|LTR|ERVL-MaLR	24047	NM_001324014	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr15-434	chr15	68851417	68854598	+	44.8	3181	"intron (NM_001324014, intron 2 of 12)"	"intron (NM_001324014, intron 2 of 12)"	-18301	NM_006091	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding	44.81	10.19	4.397448479	1.49E-12
chr15-436	chr15	69301626	69302626	+	17.9	1000	"intron (NR_033671, intron 2 of 16)"	"intron (NR_033671, intron 2 of 16)"	-4908	NM_024505	79400	Hs.657932	NM_024505	ENSG00000255346	NOX5	-	NADPH oxidase 5	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr15-437	chr15	69783013	69784013	+	16.6	1000	Intergenic	L2b|LINE|L2	38354	NM_001003	6176	Hs.356502	NM_001003	ENSG00000137818	RPLP1	LP1|P1|RPP1	ribosomal protein lateral stalk subunit P1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr15-440	chr15	74601433	74602433	+	18.6	1000	"intron (NM_025055, intron 11 of 18)"	"intron (NM_025055, intron 11 of 18)"	-8949	NM_182791	80125	Hs.383206	NM_025055	ENSG00000140481	CCDC33	CT61|HP11097	coiled-coil domain containing 33	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr15-441	chr15	74656575	74660824	+	89.6	4249	promoter-TSS (NM_001099773)	promoter-TSS (NM_001099773)	-146	NM_001099773	1583	Hs.303980	NM_000781	ENSG00000140459	CYP11A1	CYP11A|CYPXIA1|P450SCC	cytochrome P450 family 11 subfamily A member 1	protein-coding	89.61	9.22	9.719088937	7.40E-44
chr15-446	chr15	76420689	76421953	+	21.8	1264	"intron (NM_152335, intron 1 of 10)"	L1MC5|LINE|L1	52506	NR_120360	101929439	Hs.631721	NR_120360	ENSG00000259422	LOC101929439	-	uncharacterized LOC101929439	ncRNA	21.76	3.4	6.4	3.73E-09
chr15-453	chr15	79022844	79024359	+	30.1	1515	Intergenic	Intergenic	-20778	NR_036495	646938	Hs.449783	NR_036495	ENSG00000238166	LOC646938	-	TBC1 domain family member 2B pseudogene	pseudo	30.08	4.85	6.202061856	2.13E-11
chr15-456	chr15	81817063	81818063	+	18.6	1000	Intergenic	LTR31|LTR|ERV1	-151145	NM_001080532	342125	Hs.253489	NM_001080532	ENSG00000188869	TMC3	-	transmembrane channel like 3	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr15-457	chr15	81859981	81860981	+	18.6	1000	Intergenic	L2b|LINE|L2	-194063	NM_001080532	342125	Hs.253489	NM_001080532	ENSG00000188869	TMC3	-	transmembrane channel like 3	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr15-461	chr15	88968752	88970406	+	27.5	1654	Intergenic	Intergenic	41054	NM_022163	26589	Hs.534261	NM_022163	ENSG00000259494	MRPL46	C15orf4|LIECG2|P2ECSL	mitochondrial ribosomal protein L46	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr15-462	chr15	89304354	89306183	+	32	1829	Intergenic	Intergenic	-41406	NM_001135	176	Hs.2159	NM_001135	ENSG00000157766	ACAN	AGC1|AGCAN|CSPG1|CSPGCP|MSK16|SEDK	aggrecan	protein-coding	32	3.4	9.411764706	2.00E-16
chr15-463	chr15	89900765	89901765	+	19.2	1000	Intergenic	MIR|SINE|MIR	-3545	NR_133001	254559	Hs.136313	NR_015411	ENSG00000255571	MIR9-3HG	LINC00925	MIR9-3 host gene	ncRNA	19.2	2.43	7.901234568	1.91E-09
chr15-467	chr15	90046184	90047819	+	31.4	1635	Intergenic	MIR3|SINE|MIR	-7157	NR_110261	51458	Hs.459284	NM_016321	ENSG00000140519	RHCG	C15orf6|PDRC2|RHGK|SLC42A3	Rh family C glycoprotein	protein-coding	31.36	3.88	8.082474227	3.25E-14
chr15-469	chr15	90251293	90252293	+	19.2	1000	"intron (NM_001284395, intron 4 of 16)"	"intron (NM_001284395, intron 4 of 16)"	17765	NM_001284396	56964	Hs.177557	NM_020212	ENSG00000140527	WDR93	-	WD repeat domain 93	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr15-471	chr15	91784597	91785597	+	17.9	1000	"intron (NM_001323033, intron 2 of 10)"	L2|LINE|L2	140211	NM_001323040	9899	Hs.21754	NM_014848	ENSG00000185518	SV2B	HsT19680	synaptic vesicle glycoprotein 2B	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr15-474	chr15	92997589	92998589	+	18.6	1000	"intron (NM_001330416, intron 4 of 4)"	"intron (NM_001330416, intron 4 of 4)"	16687	NR_126501	104613533	Hs.97584	NR_126501	ENSG00000259170	LOC104613533	-	uncharacterized LOC104613533	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr15-475	chr15	93035258	93036522	+	21.1	1264	"intron (NM_001301106, intron 2 of 2)"	"intron (NM_001301106, intron 2 of 2)"	20983	NM_001301106	145858	Hs.367879	NM_153040		C15orf32	-	chromosome 15 open reading frame 32	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr15-48	chr15	96891810	96894055	+	46.1	2245	Intergenic	Intergenic	16363	NM_001145157	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	46.09	5.34	8.631086142	9.94E-22
chr15-482	chr15	96888708	96889708	+	17.9	1000	Intergenic	CpG	12639	NM_001145157	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr15-485	chr15	99166947	99167947	+	17.9	1000	Intergenic	L1M5|LINE|L1	-24321	NM_000875	3480	Hs.643120	NM_000875	ENSG00000140443	IGF1R	CD221|IGFIR|IGFR|JTK13	insulin like growth factor 1 receptor	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr15-489	chr15	101856563	101858894	+	38.4	2331	"intron (NM_138319, intron 19 of 21)"	"intron (NM_138319, intron 19 of 21)"	-8219	NR_045387	100507472	Hs.498494	NR_045387		LOC100507472	-	uncharacterized LOC100507472	ncRNA	38.4	7.28	5.274725275	6.93E-13
chr15-490	chr15	102010578	102013993	+	46.7	3415	"intron (NM_138322, intron 2 of 10)"	"intron (NM_138322, intron 2 of 10)"	17902	NM_138323	5046	Hs.498494	NM_002570	ENSG00000140479	PCSK6	PACE4|SPC4	proprotein convertase subtilisin/kexin type 6	protein-coding	46.73	5.82	8.029209622	1.58E-20
chr15-504	chr15	22526524	22528283	+	31.4	1759	Intergenic	Intergenic	-14123	NR_031672	100302233		NR_031672	ENSG00000221641	MIR1268A	MIR1268|MIRN1268|hsa-mir-1268|hsa-mir-1268a	microRNA 1268a	ncRNA	31.36	6.8	4.611764706	2.53E-09
chr15-507	chr15	31926785	31927785	+	17.9	1000	"intron (NM_001329907, intron 4 of 10)"	"intron (NM_001329907, intron 4 of 10)"	235590	NM_001329907	161725	Hs.355236	NM_130901	ENSG00000169918	OTUD7A	C15orf16|C16ORF15|CEZANNE2|OTUD7	OTU deubiquitinase 7A	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr15-508	chr15	32074507	32075775	+	17.9	1268	"intron (NM_001329907, intron 1 of 10)"	L2|LINE|L2	87734	NM_001329907	161725	Hs.355236	NM_130901	ENSG00000169918	OTUD7A	C15orf16|C16ORF15|CEZANNE2|OTUD7	OTU deubiquitinase 7A	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr15-509	chr15	32117941	32118941	+	16	1000	"intron (NM_001329907, intron 1 of 10)"	THE1A-int|LTR|ERVL-MaLR	44434	NM_001329907	161725	Hs.355236	NM_130901	ENSG00000169918	OTUD7A	C15orf16|C16ORF15|CEZANNE2|OTUD7	OTU deubiquitinase 7A	protein-coding	16	3.4	4.705882353	2.25E-05
chr15-51	chr15	22568729	22571699	+	43.5	2970	"intron (NR_033735, intron 2 of 2)"	"intron (NR_033735, intron 2 of 2)"	23649	NR_033735	646396	Hs.451294	NR_033735		REREP3	-	arginine-glutamic acid dipeptide repeats pseudogene 3	pseudo	43.53	6.31	6.898573693	1.02E-17
chr15-510	chr15	33126501	33127759	+	21.1	1258	"intron (NM_001103184, intron 13 of 16)"	"intron (NM_001103184, intron 13 of 16)"	-116064	NR_109767	100131315	Hs.610545	NR_109767	ENSG00000259721	LOC100131315	-	uncharacterized LOC100131315	ncRNA	21.12	0.97	21.77319588	2.68E-16
chr15-512	chr15	33826848	33829261	+	37.1	2413	"intron (NM_001243996, intron 5 of 102)"	"intron (NM_001243996, intron 5 of 102)"	224891	NM_001036	6263	Hs.709373	NM_001036	ENSG00000198838	RYR3	RYR-3	ryanodine receptor 3	protein-coding	37.12	6.8	5.458823529	7.17E-13
chr15-514	chr15	34997353	34998353	+	16.6	1000	Intergenic	MIRc|SINE|MIR	48929	NM_020660	57369	Hs.283816	NM_020660	ENSG00000159248	GJD2	CX36|GJA9	gap junction protein delta 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr15-515	chr15	37167526	37168783	+	22.4	1257	"intron (NR_024264, intron 5 of 6)"	"intron (NR_024264, intron 5 of 6)"	10580	NR_024264	145845	Hs.302693	NM_001101327		LOC145845	-	uncharacterized LOC145845	ncRNA	22.4	2.91	7.697594502	3.87E-10
chr15-516	chr15	39897083	39898729	+	26.9	1646	"intron (NM_152597, intron 11 of 11)"	Charlie8|DNA|hAT-Charlie	24626	NM_003246	7057	Hs.164226	NM_003246	ENSG00000137801	THBS1	THBS|THBS-1|TSP|TSP-1|TSP1	thrombospondin 1	protein-coding	26.88	5.82	4.618556701	1.71E-08
chr15-520	chr15	41166161	41167427	+	21.1	1266	promoter-TSS (NM_133639)	promoter-TSS (NM_133639)	-307	NM_133639	171177	Hs.447901	NM_133639	ENSG00000104140	RHOV	ARHV|CHP|WRCH2	ras homolog family member V	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr15-523	chr15	42348533	42350178	+	25	1645	Intergenic	Intergenic	-6454	NM_001206670	123745	Hs.668060	NM_001080490	ENSG00000188089	PLA2G4E	-	phospholipase A2 group IVE	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr15-526	chr15	43426993	43427993	+	17.3	1000	"intron (NR_144544, intron 2 of 11)"	"intron (NR_144544, intron 2 of 11)"	1771	NM_001347029	80021	Hs.511175	NM_024956	ENSG00000137842	TMEM62	-	transmembrane protein 62	protein-coding	17.28	0	17.80043126	3.68E-16
chr15-527	chr15	44460136	44461386	+	19.2	1250	"intron (NM_001286490, intron 1 of 15)"	"intron (NM_001286490, intron 1 of 15)"	25883	NM_001286490	84978	Hs.578544	NM_032892	ENSG00000171877	FRMD5	-	FERM domain containing 5	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr15-534	chr15	56033176	56035850	+	49.9	2674	"intron (NM_173814, intron 1 of 19)"	"intron (NM_173814, intron 1 of 19)"	804	NM_173814	283659	Hs.130957	NM_173814	ENSG00000166450	PRTG	IGDCC5	protogenin	protein-coding	49.93	7.28	6.858516484	5.35E-20
chr15-541	chr15	63278893	63280625	+	32	1732	Intergenic	L1MEd|LINE|L1	-55079	NM_001018006	7168	Hs.133892	NM_000366	ENSG00000140416	TPM1	C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA	tropomyosin 1 (alpha)	protein-coding	32	4.85	6.597938144	5.03E-13
chr15-548	chr15	65065315	65068870	+	44.8	3555	promoter-TSS (NR_138363)	promoter-TSS (NR_138363)	-150	NR_138363	348093	Hs.436518	NM_194272	ENSG00000166831	RBPMS2	-	RNA binding protein with multiple splicing 2	protein-coding	44.81	1.94	23.09793814	4.75E-35
chr15-561	chr15	70038810	70039810	+	18.6	1000	Intergenic	L1M2|LINE|L1	-88263	NR_026764	414926	Hs.569502	NR_026764	ENSG00000259703	LINC00593	C15orf50	long intergenic non-protein coding RNA 593	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr15-564	chr15	74398323	74399323	+	17.9	1000	Intergenic	Intergenic	22796	NR_027073	283731	Hs.631696	NR_027073	ENSG00000248540	LOC283731	-	uncharacterized LOC283731	ncRNA	17.92	3.4	5.270588235	8.42E-07
chr15-571	chr15	77847700	77848700	+	16.6	1000	Intergenic	Intergenic	30263	NR_135692	101929457	Hs.637111	NR_135692	ENSG00000259362	LOC101929457	-	uncharacterized LOC101929457	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr15-578	chr15	78555525	78558221	+	49.3	2696	promoter-TSS (NM_001130182)	promoter-TSS (NM_001130182)	-116	NM_001130182	55466	Hs.513053	NM_018602	ENSG00000140403	DNAJA4	MST104|MSTP104|PRO1472	DnaJ heat shock protein family (Hsp40) member A4	protein-coding	49.29	6.8	7.248529412	3.87E-20
chr15-582	chr15	79854450	79855450	+	18.6	1000	Intergenic	Intergenic	130092	NM_015206	23251	Hs.301654	NM_015206	ENSG00000169330	KIAA1024	-	KIAA1024	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr15-585	chr15	80899615	80900615	+	17.3	1000	Intergenic	Intergenic	26671	NR_049837	100847042		NR_049837	ENSG00000172379	MIR5572	-	microRNA 5572	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr15-586	chr15	81103882	81105138	+	20.5	1256	"intron (NM_018689, intron 1 of 28)"	FAM|SINE|Alu	29904	NR_030393	693132		NR_030393	ENSG00000208003	MIR549A	MIR549|MIRN549|hsa-mir-549|hsa-mir-549a|mir-549a	microRNA 549a	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr15-588	chr15	81699079	81700079	+	17.9	1000	"intron (NR_120365, intron 6 of 6)"	Charlie25|DNA|hAT-Charlie	-33161	NM_001080532	342125	Hs.253489	NM_001080532	ENSG00000188869	TMC3	-	transmembrane channel like 3	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr15-589	chr15	84039309	84043222	+	58.9	3913	Intergenic	Intergenic	-74715	NM_001324186	6457	Hs.270055	NM_003027	ENSG00000140600	SH3GL3	CNSA3|EEN-B2|HsT19371|SH3D2C|SH3P13	"SH3 domain containing GRB2 like 3, endophilin A3"	protein-coding	58.89	12.13	4.854905194	1.48E-17
chr15-590	chr15	84102067	84103363	+	22.4	1296	Intergenic	Intergenic	-13265	NM_001324186	6457	Hs.270055	NM_003027	ENSG00000140600	SH3GL3	CNSA3|EEN-B2|HsT19371|SH3D2C|SH3P13	"SH3 domain containing GRB2 like 3, endophilin A3"	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr15-591	chr15	85822586	85823586	+	18.6	1000	Intergenic	Intergenic	39445	NM_001310153	100133220	Hs.454625	NM_001310153		GOLGA6L3	-	golgin A6 family-like 3	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr15-593	chr15	89474599	89475599	+	17.3	1000	Intergenic	AluSx|SINE|Alu	-18399	NM_001310320	4240	Hs.3745	NM_005928	ENSG00000140545	MFGE8	BA46|EDIL1|HMFG|HsT19888|MFG-E8|MFGM|OAcGD3S|SED1|SPAG10|hP47	milk fat globule-EGF factor 8 protein	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr15-601	chr15	92841766	92842766	+	16.6	1000	Intergenic	HERV17-int|LTR|ERV1	-94851	NM_001330416	8128	Hs.302341	NM_006011	ENSG00000140557	ST8SIA2	HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX	"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2"	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr15-602	chr15	93149221	93150221	+	17.3	1000	Intergenic	Intergenic	-34228	NR_021493	100144604	Hs.245476	NR_021493	ENSG00000258647	LINC00930	-	long intergenic non-protein coding RNA 930	ncRNA	17.28	0.97	17.81443299	2.06E-12
chr15-607	chr15	96011480	96012480	+	15.4	1000	"intron (NR_027133, intron 3 of 5)"	"intron (NR_027133, intron 3 of 5)"	35658	NR_027132	145820	Hs.652702	NR_027132	ENSG00000259134	LINC00924	-	long intergenic non-protein coding RNA 924	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr15-610	chr15	96664306	96665564	+	19.2	1258	Intergenic	Intergenic	-204222	NM_001145155	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr15-612	chr15	96909008	96910472	+	23.7	1464	Intergenic	Intergenic	33171	NM_001145157	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr15-613	chr15	96954537	96955537	+	17.3	1000	Intergenic	Intergenic	78468	NM_001145157	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr15-614	chr15	99186502	99188062	+	26.2	1560	Intergenic	Intergenic	-4486	NM_000875	3480	Hs.643120	NM_000875	ENSG00000140443	IGF1R	CD221|IGFIR|IGFR|JTK13	insulin like growth factor 1 receptor	protein-coding	26.24	3.88	6.762886598	1.00E-10
chr15-617	chr15	101393173	101394696	+	25.6	1523	Intergenic	Intergenic	-25963	NM_000693	220	Hs.459538	NM_000693	ENSG00000184254	ALDH1A3	ALDH1A6|ALDH6|MCOP8|RALDH3	aldehyde dehydrogenase 1 family member A3	protein-coding	25.6	4.37	5.85812357	7.40E-10
chr15-624	chr15	102092818	102093818	+	18.6	1000	Intergenic	L1ME4a|LINE|L1	-63131	NM_138322	5046	Hs.498494	NM_002570	ENSG00000140479	PCSK6	PACE4|SPC4	proprotein convertase subtilisin/kexin type 6	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr15-629	chr15	21916744	21918181	+	27.5	1437	Intergenic	PABL_B|LTR|ERV1	23277	NR_027053	646214	Hs.510697	NR_027053		LOC646214	-	p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene	pseudo	27.52	4.85	5.674226804	7.61E-10
chr15-636	chr15	22493004	22494514	+	26.2	1510	Intergenic	Intergenic	19521	NR_031672	100302233		NR_031672	ENSG00000221641	MIR1268A	MIR1268|MIRN1268|hsa-mir-1268|hsa-mir-1268a	microRNA 1268a	ncRNA	26.24	5.34	4.913857678	2.00E-08
chr15-637	chr15	22503909	22505458	+	25.6	1549	Intergenic	Intergenic	8597	NR_031672	100302233		NR_031672	ENSG00000221641	MIR1268A	MIR1268|MIRN1268|hsa-mir-1268|hsa-mir-1268a	microRNA 1268a	ncRNA	25.6	5.34	4.794007491	2.00E-08
chr15-642	chr15	27606541	27607541	+	17.9	1000	"intron (NM_033223, intron 5 of 9)"	"intron (NM_033223, intron 5 of 9)"	-200575	NR_120343	101928869	Hs.585699	NR_120343	ENSG00000228740	GABRG3-AS1	-	GABRG3 antisense RNA 1	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr15-643	chr15	28342057	28343057	+	17.9	1000	"intron (NM_001300984, intron 1 of 22)"	"intron (NM_001300984, intron 1 of 22)"	1901	NM_001300984	4948	Hs.654411	NM_000275	ENSG00000104044	OCA2	BEY|BEY1|BEY2|BOCA|D15S12|EYCL|EYCL2|EYCL3|HCL3|P|PED|SHEP1	OCA2 melanosomal transmembrane protein	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr15-650	chr15	34969856	34971170	+	21.8	1314	Intergenic	L2c|LINE|L2	76269	NM_020660	57369	Hs.283816	NM_020660	ENSG00000159248	GJD2	CX36|GJA9	gap junction protein delta 2	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr15-654	chr15	39720565	39721565	+	17.9	1000	Intergenic	Intergenic	-152215	NM_003246	7057	Hs.164226	NM_003246	ENSG00000137801	THBS1	THBS|THBS-1|TSP|TSP-1|TSP1	thrombospondin 1	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr15-659	chr15	39872455	39873455	+	16.6	1000	promoter-TSS (NM_003246)	promoter-TSS (NM_003246)	-325	NM_003246	7057	Hs.164226	NM_003246	ENSG00000137801	THBS1	THBS|THBS-1|TSP|TSP-1|TSP1	thrombospondin 1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr15-66	chr15	77966002	77967264	+	26.9	1262	"intron (NM_001301195, intron 3 of 3)"	L2a|LINE|L2	14240	NR_120361	101929478	Hs.569510	NR_120361	ENSG00000259281	LINGO1-AS2	-	LINGO1 antisense RNA 2	ncRNA	26.88	1.46	18.4109589	9.89E-20
chr15-661	chr15	40190290	40192132	+	33.9	1842	"intron (NM_001271854, intron 1 of 3)"	"intron (NM_001271854, intron 1 of 3)"	21882	NM_001271854	11245	Hs.37196	NM_007223	ENSG00000166073	GPR176	HB-954	G protein-coupled receptor 176	protein-coding	33.92	6.8	4.988235294	1.08E-10
chr15-663	chr15	40670848	40672462	+	28.2	1614	Intergenic	Intergenic	-3267	NM_033286	90417	Hs.525796	NM_033286	ENSG00000128944	KNSTRN	C15orf23|HSD11|SKAP|TRAF4AF1	kinetochore localized astrin/SPAG5 binding protein	protein-coding	28.16	6.31	4.462757528	1.42E-08
chr15-665	chr15	41155899	41156899	+	17.3	1000	Intergenic	MIRc|SINE|MIR	10088	NM_133639	171177	Hs.447901	NM_133639	ENSG00000104140	RHOV	ARHV|CHP|WRCH2	ras homolog family member V	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr15-667	chr15	41786007	41788649	+	47.4	2642	"intron (NM_002220, intron 1 of 6)"	CpG	1272	NM_002220	3706	Hs.2722	NM_002220	ENSG00000137825	ITPKA	IP3-3KA|IP3KA	inositol-trisphosphate 3-kinase A	protein-coding	47.37	9.71	4.878475798	1.65E-14
chr15-671	chr15	42337915	42338915	+	17.9	1000	"intron (NM_001206670, intron 1 of 19)"	L2b|LINE|L2	4486	NM_001206670	123745	Hs.668060	NM_001080490	ENSG00000188089	PLA2G4E	-	phospholipase A2 group IVE	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr15-673	chr15	43447093	43448437	+	19.8	1344	"intron (NM_001347027, intron 6 of 9)"	"intron (NM_001347027, intron 6 of 9)"	22043	NM_001347029	80021	Hs.511175	NM_024956	ENSG00000137842	TMEM62	-	transmembrane protein 62	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr15-674	chr15	43600129	43601129	+	16	1000	Intergenic	Intergenic	-6176	NM_052955	116179	Hs.164661	NM_052955	ENSG00000159495	TGM7	TGMZ	transglutaminase 7	protein-coding	16	3.4	4.705882353	2.25E-05
chr15-677	chr15	48109420	48110420	+	16	1000	"intron (NR_120336, intron 3 of 4)"	"intron (NR_120336, intron 3 of 4)"	28513	NR_120336	101928442	Hs.242804	NR_120336	ENSG00000259572	LINC01491	-	long intergenic non-protein coding RNA 1491	ncRNA	16	0.97	16.49484536	3.54E-11
chr15-678	chr15	48152120	48153120	+	16.6	1000	Intergenic	MLT2B1|LTR|ERVL	-14187	NR_120336	101928442	Hs.242804	NR_120336	ENSG00000259572	LINC01491	-	long intergenic non-protein coding RNA 1491	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr15-680	chr15	53085999	53092907	+	139.5	6908	Intergenic	Intergenic	-7244	NM_004498	3175	Hs.658573	NM_004498	ENSG00000169856	ONECUT1	HNF-6|HNF6|HNF6A	one cut homeobox 1	protein-coding	139.54	15.05	9.271760797	2.72E-65
chr15-691	chr15	59805317	59806317	+	17.9	1000	"intron (NM_152450, intron 6 of 8)"	"intron (NM_152450, intron 6 of 8)"	75445	NM_152450	145773	Hs.531168	NM_152450	ENSG00000157470	FAM81A	-	family with sequence similarity 81 member A	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr15-693	chr15	61368770	61369770	+	17.3	1000	"intron (NM_134261, intron 1 of 10)"	"intron (NM_134261, intron 1 of 10)"	152232	NM_134261	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr15-697	chr15	62823900	62824900	+	16	1000	Intergenic	AluJr|SINE|Alu	112980	NR_026897	197003	Hs.352253	NM_152648	ENSG00000259458	MGC15885	-	uncharacterized protein MGC15885	ncRNA	16	1.94	8.24742268	7.67E-08
chr15-699	chr15	63087706	63089922	+	41	2216	"intron (NM_015059, intron 44 of 55)"	"intron (NM_015059, intron 44 of 55)"	-27342	NR_029709	406965		NR_029709	ENSG00000211137	MIR190A	MIR190|MIRN190|hsa-mir-190a|miR-190|mir-190a	microRNA 190a	ncRNA	40.97	4.85	8.44742268	3.22E-19
chr15-702	chr15	63332945	63338525	+	74.2	5580	"intron (NM_001018004, intron 1 of 8)"	CpG	897	NM_001018004	7168	Hs.133892	NM_000366	ENSG00000140416	TPM1	C15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSA	tropomyosin 1 (alpha)	protein-coding	74.25	9.71	7.646755922	2.67E-31
chr15-706	chr15	64196522	64197522	+	17.3	1000	Intergenic	Intergenic	-23451	NR_120344	101928988	Hs.673214	NR_120344	ENSG00000259351	LOC101928988	-	uncharacterized LOC101928988	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr15-707	chr15	64337060	64339674	+	37.1	2614	"intron (NM_014326, intron 1 of 11)"	CpG	154	NM_014326	23604	Hs.237886	NM_014326	ENSG00000035664	DAPK2	DRP-1|DRP1	death associated protein kinase 2	protein-coding	37.12	6.8	5.458823529	7.17E-13
chr15-711	chr15	65614644	65616993	+	35.8	2349	Intergenic	7SLRNA|srpRNA|srpRNA	-36637	NM_001316944	54956	Hs.30634	NM_017851	ENSG00000138617	PARP16	ARTD15|C15orf30|pART15	poly(ADP-ribose) polymerase family member 16	protein-coding	35.84	4.85	7.389690722	1.37E-15
chr15-713	chr15	66330931	66331931	+	16	1000	"intron (NM_032445, intron 5 of 22)"	"intron (NM_032445, intron 5 of 22)"	-1140	NR_036196	100422905		NR_036196	ENSG00000263512	MIR4311	-	microRNA 4311	ncRNA	16	3.88	4.12371134	7.91E-05
chr15-714	chr15	66387666	66388666	+	17.9	1000	"intron (NM_032445, intron 4 of 22)"	"intron (NM_032445, intron 4 of 22)"	55595	NR_036196	100422905		NR_036196	ENSG00000263512	MIR4311	-	microRNA 4311	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr15-723	chr15	67324587	67325879	+	21.8	1292	"intron (NR_135686, intron 2 of 5)"	L2a|LINE|L2	31287	NR_135686	102723493	Hs.419760	NR_135686		LOC102723493	-	uncharacterized LOC102723493	ncRNA	21.76	0.97	22.43298969	1.19E-17
chr15-725	chr15	68765567	68766828	+	23	1261	Intergenic	L1MC4a|LINE|L1	-41705	NM_001004439	22801	Hs.436416	NM_012211	ENSG00000137809	ITGA11	HsT18964	integrin subunit alpha 11	protein-coding	23.04	0.49	47.02040816	2.80E-24
chr15-726	chr15	68811708	68812960	+	21.1	1252	"intron (NM_001324014, intron 1 of 12)"	L1MEg|LINE|L1	1622	NM_001324014	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr15-728	chr15	68864278	68865944	+	25	1666	"intron (NM_001324014, intron 2 of 12)"	"intron (NM_001324014, intron 2 of 12)"	-6197	NM_006091	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr15-732	chr15	70279525	70280525	+	17.9	1000	Intergenic	(TGGA)n|Simple_repeat|Simple_repeat	91782	NR_030714	693214		NR_030714	ENSG00000207965	MIR629	MIRN629|hsa-mir-629|mir-629	microRNA 629	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr15-733	chr15	70558815	70559815	+	16	1000	Intergenic	L2c|LINE|L2	-169059	NM_001105192	7090	Hs.287362	NM_005078	ENSG00000140332	TLE3	ESG|ESG3|GRG3|HsT18976	transducin like enhancer of split 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr15-734	chr15	70682437	70683437	+	17.9	1000	Intergenic	L1ME2|LINE|L1	196008	NR_135691	101929151	Hs.434703	NR_135691	ENSG00000280639	LOC101929151	-	uncharacterized LOC101929151	ncRNA	17.92	2.43	7.374485597	1.53E-08
chr15-735	chr15	70735242	70737606	+	37.8	2364	Intergenic	Intergenic	142521	NR_135691	101929151	Hs.434703	NR_135691	ENSG00000280639	LOC101929151	-	uncharacterized LOC101929151	ncRNA	37.76	5.34	7.071161049	1.96E-15
chr15-737	chr15	73653603	73658082	+	58.2	4479	"intron (NM_005477, intron 1 of 7)"	"intron (NM_005477, intron 1 of 7)"	5763	NM_005477	10021	Hs.86941	NM_005477	ENSG00000138622	HCN4	SSS2	hyperpolarization activated cyclic nucleotide gated potassium channel 4	protein-coding	58.25	6.31	9.231378764	1.01E-27
chr15-739	chr15	74224795	74225795	+	17.9	1000	"intron (NM_005576, intron 1 of 6)"	"intron (NM_005576, intron 1 of 6)"	-4706	NR_040069	100287616	Hs.599785	NR_040066	ENSG00000261801	LOXL1-AS1	-	LOXL1 antisense RNA 1	ncRNA	17.92	3.4	5.270588235	8.42E-07
chr15-741	chr15	74664226	74665226	+	16.6	1000	Intergenic	Intergenic	-4645	NM_000781	1583	Hs.303980	NM_000781	ENSG00000140459	CYP11A1	CYP11A|CYPXIA1|P450SCC	cytochrome P450 family 11 subfamily A member 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr15-745	chr15	76004461	76006970	+	51.2	2509	promoter-TSS (NM_001897)	promoter-TSS (NM_001897)	-526	NM_001897	1464	Hs.513044	NM_001897	ENSG00000173546	CSPG4	HMW-MAA|MCSP|MCSPG|MEL-CSPG|MSK16|NG2	chondroitin sulfate proteoglycan 4	protein-coding	51.21	7.28	7.034340659	7.57E-21
chr15-749	chr15	77978189	77979189	+	16.6	1000	"intron (NM_001301194, intron 2 of 3)"	"intron (NM_001301194, intron 2 of 3)"	9801	NM_001301200	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr15-751	chr15	78043880	78044880	+	16.6	1000	"intron (NM_001301186, intron 2 of 5)"	MIRb|SINE|MIR	-31287	NM_001301197	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr15-753	chr15	78529094	78530094	+	16.6	1000	Intergenic	Intergenic	-2545	NM_015162	23205	Hs.655760	NM_015162	ENSG00000103740	ACSBG1	BG|BG1|BGM|GR-LACS|LPD	acyl-CoA synthetase bubblegum family member 1	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr15-754	chr15	80551212	80552469	+	18.6	1257	Intergenic	Intergenic	-7237	NR_120317	100996492	Hs.20034	NR_120317	ENSG00000259417	LINC01314	-	long intergenic non-protein coding RNA 1314	ncRNA	18.56	0.97	19.13402062	1.12E-13
chr15-755	chr15	80792963	80796831	+	71	3868	"intron (NM_014862, intron 5 of 18)"	L2|LINE|L2	60388	NR_120363	101929586	Hs.569426	NR_120363	ENSG00000259175	LOC101929586	-	uncharacterized LOC101929586	ncRNA	71.05	13.11	5.419527079	1.25E-22
chr15-757	chr15	81380986	81381986	+	17.9	1000	Intergenic	Intergenic	-45158	NM_173528	161502	Hs.130979	NM_173528	ENSG00000156206	CFAP161	C15orf26	cilia and flagella associated protein 161	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr15-758	chr15	81763023	81764789	+	27.5	1766	Intergenic	Intergenic	-97488	NM_001080532	342125	Hs.253489	NM_001080532	ENSG00000188869	TMC3	-	transmembrane channel like 3	protein-coding	27.52	5.34	5.153558052	3.94E-09
chr15-759	chr15	81769851	81770851	+	17.3	1000	Intergenic	Intergenic	-103933	NM_001080532	342125	Hs.253489	NM_001080532	ENSG00000188869	TMC3	-	transmembrane channel like 3	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr15-764	chr15	89757579	89758854	+	19.2	1275	"intron (NM_000326, intron 6 of 8)"	"intron (NM_000326, intron 6 of 8)"	6706	NM_000326	6017	Hs.1933	NM_000326	ENSG00000140522	RLBP1	CRALBP	retinaldehyde binding protein 1	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr15-765	chr15	89935951	89937293	+	23.7	1342	"intron (NR_015411, intron 6 of 6)"	"intron (NR_015411, intron 6 of 6)"	15349	NR_015411	254559	Hs.136313	NR_015411	ENSG00000255571	MIR9-3HG	LINC00925	MIR9-3 host gene	ncRNA	23.68	4.85	4.882474227	1.15E-07
chr15-770	chr15	91648631	91651754	+	38.4	3123	"intron (NM_001323039, intron 1 of 12)"	"intron (NM_001323039, intron 1 of 12)"	5306	NM_001323040	9899	Hs.21754	NM_014848	ENSG00000185518	SV2B	HsT19680	synaptic vesicle glycoprotein 2B	protein-coding	38.4	9.22	4.164859002	1.94E-10
chr15-771	chr15	91682987	91683987	+	16	1000	"intron (NM_001323040, intron 2 of 12)"	"intron (NM_001323040, intron 2 of 12)"	38601	NM_001323040	9899	Hs.21754	NM_014848	ENSG00000185518	SV2B	HsT19680	synaptic vesicle glycoprotein 2B	protein-coding	16	2.91	5.498281787	4.98E-06
chr15-772	chr15	91737526	91738796	+	22.4	1270	"intron (NM_001323040, intron 2 of 12)"	MLT1I|LTR|ERVL-MaLR	93275	NM_001323040	9899	Hs.21754	NM_014848	ENSG00000185518	SV2B	HsT19680	synaptic vesicle glycoprotein 2B	protein-coding	22.4	5.34	4.194756554	1.97E-06
chr15-779	chr15	93220524	93223432	+	41.6	2908	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-22947	NM_207446	400451	Hs.27373	NM_207446	ENSG00000185442	FAM174B	-	family with sequence similarity 174 member B	protein-coding	41.61	9.71	4.285272915	3.58E-11
chr15-78	chr15	68980495	68982045	+	32	1550	"intron (NM_001190456, intron 2 of 11)"	"intron (NM_001190456, intron 2 of 11)"	47428	NM_001324015	10391	Hs.551213	NM_006091	ENSG00000103647	CORO2B	CLIPINC	coronin 2B	protein-coding	32	7.28	4.395604396	2.08E-09
chr15-784	chr15	95138628	95139916	+	20.5	1288	Intergenic	MLT1A0|LTR|ERVL-MaLR	240108	NM_001159644	55784	Hs.33368	NM_018349	ENSG00000140563	MCTP2	-	multiple C2 and transmembrane domain containing 2	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr15-785	chr15	95208724	95209724	+	16.6	1000	Intergenic	Intergenic	-189368	NR_077061	440311	Hs.745156	NR_077061	ENSG00000260521	LOC440311	-	glioma tumor suppressor candidate region gene 2 pseudogene	pseudo	16.64	2.91	5.718213058	8.60E-07
chr15-787	chr15	95991309	95995568	+	78.1	4259	"intron (NR_027133, intron 1 of 5)"	"intron (NR_027133, intron 1 of 5)"	17116	NR_027132	145820	Hs.652702	NR_027132	ENSG00000259134	LINC00924	-	long intergenic non-protein coding RNA 924	ncRNA	78.09	10.68	7.311797753	8.51E-32
chr15-789	chr15	96529945	96531235	+	21.8	1290	Intergenic	Intergenic	-338567	NM_001145155	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr15-79	chr15	76350868	76355649	+	76.8	4781	"intron (NM_152335, intron 1 of 10)"	"intron (NM_152335, intron 1 of 10)"	959	NM_152335	123591	Hs.661411	NM_152335	ENSG00000169758	TMEM266	C15orf27|HVRP1	transmembrane protein 266	protein-coding	76.81	16.5	4.655151515	1.59E-21
chr15-790	chr15	96564682	96565682	+	17.9	1000	Intergenic	AluSp|SINE|Alu	-303975	NM_001145155	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr15-791	chr15	96591982	96595258	+	44.8	3276	Intergenic	L1ME4a|LINE|L1	-275537	NM_001145155	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	44.81	8.74	5.127002288	2.02E-14
chr15-798	chr15	99331702	99332702	+	17.3	1000	"intron (NM_000875, intron 2 of 20)"	"intron (NM_000875, intron 2 of 20)"	4547	NR_039864	100616432		NR_039864	ENSG00000264480	MIR4714	-	microRNA 4714	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr15-801	chr15	101582688	101586107	+	50.6	3419	"intron (NM_024652, intron 20 of 33)"	"intron (NM_024652, intron 20 of 33)"	-124909	NR_135828	101927751	Hs.659224	NR_135827	ENSG00000259583	LOC101927751	-	uncharacterized LOC101927751	ncRNA	50.57	12.62	4.007131537	1.94E-12
chr15-81	chr15	78604264	78607010	+	55.7	2746	Intergenic	Intergenic	-13569	NM_001303248	80349	Hs.513055	NM_025234	ENSG00000140395	WDR61	REC14|SKI8	WD repeat domain 61	protein-coding	55.69	9.71	5.735324408	6.93E-19
chr15-823	chr15	22555052	22556052	+	15.4	1000	"intron (NR_033735, intron 1 of 2)"	L1M5|LINE|L1	8987	NR_033735	646396	Hs.451294	NR_033735		REREP3	-	arginine-glutamic acid dipeptide repeats pseudogene 3	pseudo	15.36	2.91	5.278350515	4.98E-06
chr15-826	chr15	29251984	29252984	+	16	1000	"intron (NM_005503, intron 1 of 13)"	AluJr|SINE|Alu	38644	NM_001130414	321	Hs.618112	NM_005503	ENSG00000034053	APBA2	D15S1518E|HsT16821|LIN-10|MGC:14091|MINT2|X11-BETA|X11L	amyloid beta precursor protein binding family A member 2	protein-coding	16	2.43	6.58436214	7.90E-07
chr15-827	chr15	29269882	29271811	+	31.4	1929	"intron (NM_005503, intron 1 of 13)"	"intron (NM_005503, intron 1 of 13)"	57006	NM_001130414	321	Hs.618112	NM_005503	ENSG00000034053	APBA2	D15S1518E|HsT16821|LIN-10|MGC:14091|MINT2|X11-BETA|X11L	amyloid beta precursor protein binding family A member 2	protein-coding	31.36	4.85	6.465979381	3.34E-12
chr15-833	chr15	32145901	32146901	+	16.6	1000	"intron (NM_001329907, intron 1 of 10)"	MLT1D|LTR|ERVL-MaLR	16474	NM_001329907	161725	Hs.355236	NM_130901	ENSG00000169918	OTUD7A	C15orf16|C16ORF15|CEZANNE2|OTUD7	OTU deubiquitinase 7A	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr15-835	chr15	34961252	34962252	+	16.6	1000	Intergenic	AluJb|SINE|Alu	85030	NM_020660	57369	Hs.283816	NM_020660	ENSG00000159248	GJD2	CX36|GJA9	gap junction protein delta 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr15-836	chr15	35315058	35316058	+	17.3	1000	Intergenic	L1MC5|LINE|L1	-35061	NM_014106	54989	Hs.744990	NM_014106	ENSG00000198146	ZNF770	PRO1914	zinc finger protein 770	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr15-842	chr15	39636744	39637999	+	21.1	1255	Intergenic	Intergenic	94501	NM_001302797	400360	Hs.376109	NM_207445		C15orf54	-	chromosome 15 open reading frame 54	ncRNA	21.12	1.94	10.88659794	9.02E-12
chr15-846	chr15	40401574	40402574	+	17.3	1000	promoter-TSS (NM_001003943)	promoter-TSS (NM_001003943)	-989	NM_001003943	90427	Hs.591104	NM_033503	ENSG00000104081	BMF	-	Bcl2 modifying factor	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr15-848	chr15	40728064	40730171	+	37.8	2107	Intergenic	Intergenic	-2803	NM_001301132	22893	Hs.22109	NM_014952	ENSG00000140320	BAHD1	-	bromo adjacent homology domain containing 1	protein-coding	37.76	6.8	5.552941176	7.17E-13
chr15-858	chr15	45303499	45304754	+	21.8	1255	Intergenic	HERV9-int|LTR|ERV1	-11176	NR_034039	6652	Hs.878	NM_003104	ENSG00000140263	SORD	HEL-S-95n|SORD1	sorbitol dehydrogenase	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr15-860	chr15	45669601	45670601	+	16	1000	"intron (NM_001321015, intron 4 of 11)"	CpG	879	NM_001482	2628	Hs.75335	NM_001482	ENSG00000171766	GATM	AGAT|AT|CCDS3	glycine amidinotransferase	protein-coding	16	1.94	8.24742268	7.67E-08
chr15-862	chr15	48096617	48097617	+	17.3	1000	"intron (NR_120336, intron 3 of 4)"	"intron (NR_120336, intron 3 of 4)"	41316	NR_120336	101928442	Hs.242804	NR_120336	ENSG00000259572	LINC01491	-	long intergenic non-protein coding RNA 1491	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr15-863	chr15	49991697	49992952	+	20.5	1255	Intergenic	HERVH-int|LTR|ERV1	79098	NM_020234	56986	Hs.127432	NM_020234	ENSG00000104047	DTWD1	MDS009	DTW domain containing 1	protein-coding	20.48	1.46	14.02739726	1.29E-13
chr15-864	chr15	52564991	52565991	+	16	1000	"intron (NM_018728, intron 5 of 40)"	AluJr|SINE|Alu	3906	NR_031670	100302202		NR_031670	ENSG00000221052	MIR1266	MIRN1266|hsa-mir-1266|mir-1266	microRNA 1266	ncRNA	16	2.91	5.498281787	4.98E-06
chr15-865	chr15	52587055	52589037	+	34.6	1982	promoter-TSS (NM_018728)	promoter-TSS (NM_018728)	-51	NM_018728	55930	Hs.487036	NM_018728	ENSG00000128833	MYO5C	-	myosin VC	protein-coding	34.56	5.82	5.93814433	6.75E-13
chr15-866	chr15	53074632	53075632	+	14.1	1000	"intron (NM_004498, intron 1 of 1)"	"intron (NM_004498, intron 1 of 1)"	-2051	NR_073510	3175	Hs.658573	NM_004498	ENSG00000169856	ONECUT1	HNF-6|HNF6|HNF6A	one cut homeobox 1	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr15-867	chr15	57847512	57849305	+	29.4	1793	Intergenic	Intergenic	-35694	NR_104368	145781	Hs.437256	NM_001018090	ENSG00000137878	GCOM1	GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom	GRINL1A complex locus 1	protein-coding	29.44	4.37	6.736842105	2.70E-12
chr15-871	chr15	57974606	57975606	+	16	1000	"intron (NM_001018091, intron 12 of 12)"	"intron (NM_001018091, intron 12 of 12)"	-23613	NM_015532	81488	Hs.437256	NM_015532	ENSG00000255529	POLR2M	GCOM1|GRINL1A|Gdown|Gdown1	RNA polymerase II subunit M	protein-coding	16	3.4	4.705882353	2.25E-05
chr15-872	chr15	58155540	58157467	+	30.7	1927	Intergenic	Intergenic	149792	NM_170697	8854	Hs.643455	NM_003888	ENSG00000128918	ALDH1A2	RALDH(II)|RALDH2|RALDH2-T	aldehyde dehydrogenase 1 family member A2	protein-coding	30.72	5.82	5.278350515	1.29E-10
chr15-875	chr15	59485613	59486613	+	16	1000	"intron (NM_004998, intron 17 of 27)"	AluSg4|SINE|Alu	-12902	NM_033195	92483	Hs.307052	NM_033195	ENSG00000171989	LDHAL6B	LDH6B|LDHAL6|LDHL	lactate dehydrogenase A like 6B	protein-coding	16	3.4	4.705882353	2.25E-05
chr15-877	chr15	59839396	59840396	+	16	1000	Intergenic	Intergenic	-64086	NM_004751	9245	Hs.194710	NM_004751	ENSG00000140297	GCNT3	C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM	"glucosaminyl (N-acetyl) transferase 3, mucin type"	protein-coding	16	3.88	4.12371134	7.91E-05
chr15-878	chr15	59847439	59848439	+	17.3	1000	Intergenic	AluSz6|SINE|Alu	-56043	NM_004751	9245	Hs.194710	NM_004751	ENSG00000140297	GCNT3	C2/4GnT|C24GNT|C2GNT2|C2GNTM|GNTM	"glucosaminyl (N-acetyl) transferase 3, mucin type"	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr15-880	chr15	60996067	60997355	+	18.6	1288	"intron (NM_134261, intron 1 of 10)"	"intron (NM_134261, intron 1 of 10)"	22943	NR_120318	100996876	Hs.511626	NR_120318		RORA-AS2	-	RORA antisense RNA 2	ncRNA	18.56	3.4	5.458823529	8.42E-07
chr15-882	chr15	61092639	61093639	+	16	1000	"intron (NM_134261, intron 1 of 10)"	L2b|LINE|L2	119371	NR_120318	100996876	Hs.511626	NR_120318		RORA-AS2	-	RORA antisense RNA 2	ncRNA	16	1.94	8.24742268	7.67E-08
chr15-883	chr15	61491024	61492024	+	17.3	1000	"intron (NM_134261, intron 1 of 10)"	"intron (NM_134261, intron 1 of 10)"	29978	NM_134261	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr15-884	chr15	61818604	61819604	+	17.3	1000	Intergenic	LTR85a|LTR|Gypsy?	-297602	NM_134261	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr15-886	chr15	62011148	62012864	+	29.4	1716	Intergenic	MIRb|SINE|MIR	340658	NM_017684	54832	Hs.511668	NM_017684	ENSG00000129003	VPS13C	PARK23	vacuolar protein sorting 13 homolog C	protein-coding	29.44	6.8	4.329411765	1.16E-08
chr15-889	chr15	62650726	62651726	+	16.6	1000	Intergenic	AluSz6|SINE|Alu	15998	NR_106733	102464834		NR_106733	ENSG00000275451	MIR6085	hsa-mir-6085	microRNA 6085	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr15-891	chr15	62776309	62777589	+	21.1	1280	Intergenic	Intergenic	141721	NR_106733	102464834		NR_106733	ENSG00000275451	MIR6085	hsa-mir-6085	microRNA 6085	ncRNA	21.12	4.85	4.354639175	2.52E-06
chr15-893	chr15	62808047	62809047	+	17.3	1000	Intergenic	Intergenic	128833	NR_026897	197003	Hs.352253	NM_152648	ENSG00000259458	MGC15885	-	uncharacterized protein MGC15885	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr15-904	chr15	65713356	65714356	+	16.6	1000	"intron (NM_020962, intron 1 of 19)"	"intron (NM_020962, intron 1 of 19)"	1554	NM_020962	57722	Hs.458607	NM_020962	ENSG00000103742	IGDCC4	DDM36|NOPE	immunoglobulin superfamily DCC subclass member 4	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr15-907	chr15	66532009	66533009	+	16.6	1000	"intron (NM_032445, intron 1 of 22)"	"intron (NM_032445, intron 1 of 22)"	13566	NM_032445	84465	Hs.712886	NM_032445	ENSG00000157890	MEGF11	-	multiple EGF like domains 11	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr15-910	chr15	69237061	69238061	+	16.6	1000	"intron (NM_001184780, intron 1 of 15)"	MER63B|DNA|hAT-Blackjack	14722	NR_033672	79400	Hs.657932	NM_024505	ENSG00000255346	NOX5	-	NADPH oxidase 5	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr15-914	chr15	70306907	70307907	+	16	1000	Intergenic	Intergenic	64400	NR_030714	693214		NR_030714	ENSG00000207965	MIR629	MIRN629|hsa-mir-629|mir-629	microRNA 629	ncRNA	16	2.43	6.58436214	7.90E-07
chr15-915	chr15	70833341	70834937	+	25.6	1596	Intergenic	Intergenic	44806	NR_135691	101929151	Hs.434703	NR_135691	ENSG00000280639	LOC101929151	-	uncharacterized LOC101929151	ncRNA	25.6	2.91	8.797250859	6.53E-13
chr15-918	chr15	73662691	73663691	+	16.6	1000	Intergenic	Intergenic	-1586	NM_005477	10021	Hs.86941	NM_005477	ENSG00000138622	HCN4	SSS2	hyperpolarization activated cyclic nucleotide gated potassium channel 4	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr15-919	chr15	73971337	73972337	+	16.6	1000	Intergenic	Intergenic	-4785	NM_001329629	80381	Hs.744915	NM_025240	ENSG00000103855	CD276	4Ig-B7-H3|B7-H3|B7H3|B7RP-2	CD276 molecule	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr15-921	chr15	74109754	74111089	+	17.9	1335	Intergenic	Intergenic	49866	NR_120352	101929221		NR_120352		C15orf59-AS1	-	C15orf59 antisense RNA 1	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr15-929	chr15	75938631	75941623	+	47.4	2992	Intergenic	CpG	-1221	NM_153271	257364	Hs.8705	NM_153271	ENSG00000173548	SNX33	SH3PX3|SH3PXD3C|SNX30	sorting nexin 33	protein-coding	47.37	6.8	6.966176471	2.78E-19
chr15-935	chr15	77874002	77875530	+	26.2	1528	Intergenic	Intergenic	50103	NM_032808	84894	Hs.656765	NM_032808	ENSG00000169783	LINGO1	LERN1|LRRN6A|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding	26.24	5.82	4.508591065	7.99E-08
chr15-94	chr15	57706324	57707580	+	25	1256	"intron (NM_032866, intron 1 of 18)"	"intron (NM_032866, intron 1 of 18)"	38249	NM_001252335	84952	Hs.148989	NM_032866	ENSG00000128849	CGNL1	JACOP|PCING	cingulin like 1	protein-coding	24.96	2.91	8.577319588	5.77E-12
chr15-943	chr15	79576323	79577323	+	17.3	1000	promoter-TSS (NR_038997)	promoter-TSS (NR_038997)	-536	NR_038997	729911	Hs.513931	NR_038997	ENSG00000259234	ANKRD34C-AS1	-	ANKRD34C antisense RNA 1	ncRNA	17.28	0.97	17.81443299	2.06E-12
chr15-95	chr15	60881391	60885034	+	68.5	3643	"intron (NM_134260, intron 1 of 11)"	"intron (NM_134260, intron 1 of 11)"	1495	NM_134262	6095	Hs.560343	NM_002943	ENSG00000069667	RORA	NR1F1|ROR1|ROR2|ROR3|RZR-ALPHA|RZRA	RAR related orphan receptor A	protein-coding	68.49	8.74	7.836384439	4.68E-29
chr15-952	chr15	84565510	84566510	+	16.6	1000	"intron (NM_001301110, intron 13 of 29)"	Arthur1|DNA|hAT-Tip100	-182929	NR_036652	648809	Hs.585157	NR_036652		EFTUD1P1	FAM42B|HsT19321	elongation factor Tu GTP binding domain containing 1 pseudogene 1	pseudo	16.64	2.91	5.718213058	8.60E-07
chr15-954	chr15	85897185	85898185	+	17.3	1000	Intergenic	Intergenic	-26142	NR_106993	102465803		NR_106993	ENSG00000170776	MIR7706	hsa-mir-7706	microRNA 7706	ncRNA	17.28	0.97	17.81443299	2.06E-12
chr15-955	chr15	88778187	88779187	+	15.4	1000	"intron (NM_001007156, intron 3 of 15)"	"intron (NM_001007156, intron 3 of 15)"	-17274	NR_038229	283738	Hs.578429	NR_038229	ENSG00000260305	NTRK3-AS1	-	NTRK3 antisense RNA 1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr15-958	chr15	89151115	89152115	+	16.6	1000	TTS (NR_031590)	TTS (NR_031590)	277	NR_031590	100302235		NR_031590	ENSG00000221630	MIR1179	MIRN1179|hsa-mir-1179|mir-1179	microRNA 1179	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr15-959	chr15	89202731	89203731	+	16.6	1000	Intergenic	Intergenic	21257	NM_002201	3669	Hs.459265	NM_002201	ENSG00000172183	ISG20	CD25|HEM45	interferon stimulated exonuclease gene 20	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr15-962	chr15	89940347	89941605	+	19.8	1258	"non-coding (NR_133001, exon 7 of 7)"	"non-coding (NR_133001, exon 7 of 7)"	19703	NR_015411	254559	Hs.136313	NR_015411	ENSG00000255571	MIR9-3HG	LINC00925	MIR9-3 host gene	ncRNA	19.84	3.88	5.113402062	7.67E-07
chr15-963	chr15	89955724	89957893	+	37.8	2169	Intergenic	Intergenic	35535	NR_015411	254559	Hs.136313	NR_015411	ENSG00000255571	MIR9-3HG	LINC00925	MIR9-3 host gene	ncRNA	37.76	1.94	19.46391753	4.60E-27
chr15-964	chr15	89983003	89984003	+	16	1000	Intergenic	MIRb|SINE|MIR	56311	NM_001321041	51458	Hs.459284	NM_016321	ENSG00000140519	RHCG	C15orf6|PDRC2|RHGK|SLC42A3	Rh family C glycoprotein	protein-coding	16	2.91	5.498281787	4.98E-06
chr15-967	chr15	91829103	91830103	+	17.3	1000	"intron (NM_001323040, intron 11 of 12)"	"intron (NM_001323040, intron 11 of 12)"	-176966	NR_110106	101926928	Hs.638788	NR_110106	ENSG00000258551	CRAT37	-	cervical cancer-associated transcript 37	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr15-968	chr15	92396553	92397911	+	19.8	1358	promoter-TSS (NR_135775)	promoter-TSS (NR_135775)	294	NM_013272	28232	Hs.311187	NM_013272	ENSG00000176463	SLCO3A1	OATP-D|OATP-RP3|OATP3A1|OATPD|OATPRP3|SLC21A11	solute carrier organic anion transporter family member 3A1	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr15-97	chr15	66543882	66548700	+	120.3	4818	promoter-TSS (NM_032445)	promoter-TSS (NM_032445)	-216	NM_032445	84465	Hs.712886	NM_032445	ENSG00000157890	MEGF11	-	multiple EGF like domains 11	protein-coding	120.34	14.08	8.546875	1.31E-53
chr15-972	chr15	92932024	92933024	+	16	1000	Intergenic	Intergenic	-4593	NM_001330416	8128	Hs.302341	NM_006011	ENSG00000140557	ST8SIA2	HsT19690|SIAT8-B|SIAT8B|ST8SIA-II|ST8SiaII|STX	"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2"	protein-coding	16	3.4	4.705882353	2.25E-05
chr15-975	chr15	93207184	93208733	+	25.6	1549	Intergenic	Intergenic	-8927	NM_207446	400451	Hs.27373	NM_207446	ENSG00000185442	FAM174B	-	family with sequence similarity 174 member B	protein-coding	25.6	4.37	5.85812357	7.40E-10
chr15-977	chr15	94774482	94775482	+	16	1000	Intergenic	Intergenic	-66448	NM_018349	55784	Hs.33368	NM_018349	ENSG00000140563	MCTP2	-	multiple C2 and transmembrane domain containing 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr15-98	chr15	73196668	73198074	+	23.7	1406	Intergenic	LTR84a|LTR|ERVL	-121245	NM_031284	83440	Hs.562587	NM_031284	ENSG00000159322	ADPGK	2610017G09Rik|ADP-GK	ADP dependent glucokinase	protein-coding	23.68	1.46	16.21917808	5.41E-16
chr15-980	chr15	95194457	95195457	+	17.3	1000	Intergenic	Intergenic	-203635	NR_077061	440311	Hs.745156	NR_077061	ENSG00000260521	LOC440311	-	glioma tumor suppressor candidate region gene 2 pseudogene	pseudo	17.28	1.94	8.907216495	8.87E-09
chr15-984	chr15	96723264	96724523	+	19.2	1259	"intron (NR_125738, intron 3 of 4)"	MamGypLTR1b|LTR|Gypsy	-145264	NM_001145155	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr15-985	chr15	96865887	96869544	+	57	3657	"intron (NR_102744, intron 1 of 1)"	"intron (NR_102744, intron 1 of 1)"	-1442	NM_001145155	7026	Hs.347991	NM_021005	ENSG00000185551	NR2F2	ARP1|CHTD4|COUPTFB|COUPTFII|NF-E3|NR2F1|SVP40|TFCOUP2	nuclear receptor subfamily 2 group F member 2	protein-coding	56.97	7.28	7.825549451	2.40E-24
chr15-988	chr15	98991237	98994708	+	48	3471	"intron (NM_182562, intron 5 of 6)"	Tigger1|DNA|TcMar-Tigger	64639	NM_182562	283777	Hs.668070	NM_182562	ENSG00000185087	FAM169B	-	family with sequence similarity 169 member B	protein-coding	48.01	7.28	6.59478022	2.47E-18
chr15-991	chr15	99087814	99088814	+	16.6	1000	Intergenic	L2a|LINE|L2	-30703	NM_182562	283777	Hs.668070	NM_182562	ENSG00000185087	FAM169B	-	family with sequence similarity 169 member B	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr15-993	chr15	99276946	99277946	+	17.3	1000	"intron (NM_000875, intron 2 of 20)"	"intron (NM_000875, intron 2 of 20)"	-50209	NR_039864	100616432		NR_039864	ENSG00000264480	MIR4714	-	microRNA 4714	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr15-994	chr15	101262249	101263249	+	16.6	1000	Intergenic	MARNA|DNA|TcMar-Mariner	119994	NM_198243	140460	Hs.31845	NM_024708	ENSG00000183475	ASB7	-	ankyrin repeat and SOCS box containing 7	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr15-995	chr15	101433486	101434486	+	17.3	1000	"non-coding (NR_135827, exon 2 of 2)"	"non-coding (NR_135827, exon 2 of 2)"	14089	NM_001293815	220	Hs.459538	NM_000693	ENSG00000184254	ALDH1A3	ALDH1A6|ALDH6|MCOP8|RALDH3	aldehyde dehydrogenase 1 family member A3	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr15-996	chr15	101437922	101438922	+	16.6	1000	"intron (NM_000693, intron 8 of 12)"	"intron (NM_000693, intron 8 of 12)"	18525	NM_001293815	220	Hs.459538	NM_000693	ENSG00000184254	ALDH1A3	ALDH1A6|ALDH6|MCOP8|RALDH3	aldehyde dehydrogenase 1 family member A3	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr16-1001	chr16	10718204	10719204	+	16.6	1000	Intergenic	L2|LINE|L2	-44131	NM_001424	2013	Hs.531561	NM_001424	ENSG00000213853	EMP2	XMP	epithelial membrane protein 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr16-1002	chr16	10778759	10779759	+	16	1000	"intron (NM_144674, intron 3 of 6)"	AluSz|SINE|Alu	9543	NM_144674	146279	Hs.143519	NM_144674	ENSG00000153060	TEKT5	CT149	tektin 5	protein-coding	16	3.88	4.12371134	7.91E-05
chr16-1003	chr16	10816196	10817196	+	16	1000	Intergenic	Intergenic	-20947	NM_001278506	4682	Hs.81469	NM_002484	ENSG00000103274	NUBP1	NBP|NBP1|NBP35	nucleotide binding protein 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr16-1004	chr16	10942947	10943947	+	16.6	1000	Intergenic	AluJb|SINE|Alu	-27608	NM_001286402	4261	Hs.592051	NM_000246	ENSG00000179583	CIITA	C2TA|CIITAIV|MHC2TA|NLRA	class II major histocompatibility complex transactivator	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr16-1006	chr16	11376837	11378110	+	19.8	1273	Intergenic	Intergenic	-2281	NM_002761	5619	Hs.2909	NM_002761	ENSG00000175646	PRM1	CT94.1|P1	protamine 1	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr16-1007	chr16	11610390	11611390	+	16	1000	Intergenic	MER34A|LTR|ERV1	51774	NR_110907	101927131	Hs.569654	NR_110907	ENSG00000262999	LOC101927131	-	uncharacterized LOC101927131	ncRNA	16	2.43	6.58436214	7.90E-07
chr16-1009	chr16	12986408	12987408	+	16	1000	Intergenic	Intergenic	-8569	NM_001145205	729993	Hs.130661	NM_001145204	ENSG00000237515	SHISA9	CKAMP44	shisa family member 9	protein-coding	16	2.91	5.498281787	4.98E-06
chr16-1011	chr16	15528103	15529376	+	17.9	1273	"intron (NM_033201, intron 1 of 5)"	CpG	414	NM_033201	89927	Hs.401798	NM_033201	ENSG00000166780	C16orf45	MINP	chromosome 16 open reading frame 45	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr16-1012	chr16	15632442	15633442	+	16	1000	"intron (NM_001142469, intron 2 of 5)"	MER1A|DNA|hAT-Charlie	36819	NM_001142469	89927	Hs.401798	NM_033201	ENSG00000166780	C16orf45	MINP	chromosome 16 open reading frame 45	protein-coding	16	3.4	4.705882353	2.25E-05
chr16-1013	chr16	15946622	15947622	+	16.6	1000	"intron (NM_022844, intron 1 of 41)"	AluJr4|SINE|Alu	3765	NM_002474	4629	Hs.460109	NM_002474	ENSG00000133392	MYH11	AAT4|FAA4|SMHC|SMMHC	myosin heavy chain 11	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr16-1014	chr16	17726118	17727118	+	15.4	1000	Intergenic	Intergenic	-161880	NM_022166	64131	Hs.22907	NM_022166	ENSG00000103489	XYLT1	DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I	xylosyltransferase 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr16-1015	chr16	18063716	18065032	+	19.2	1316	Intergenic	Intergenic	362145	NM_001282511	101059953	Hs.636569	NM_001282511	ENSG00000214940	NPIPA8	LCR16a9	nuclear pore complex interacting protein family member A8	protein-coding	19.2	2.43	7.901234568	1.91E-09
chr16-1016	chr16	19004808	19005808	+	16	1000	"intron (NM_001160364, intron 1 of 15)"	HERVH-int|LTR|ERV1	9699	NM_001160364	79905	Hs.187377	NM_024847	ENSG00000170537	TMC7	-	transmembrane channel like 7	protein-coding	16	2.43	6.58436214	7.90E-07
chr16-1017	chr16	20366446	20367446	+	16.6	1000	Intergenic	AluSx|SINE|Alu	-2746	NM_001008389	7369	Hs.654425	NM_003361	ENSG00000169344	UMOD	ADMCKD2|FJHN|HNFJ|HNFJ1|MCKD2|THGP|THP	uromodulin	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr16-1021	chr16	21112161	21113442	+	19.2	1281	"intron (NM_001347886, intron 16 of 61)"	"intron (NM_001347886, intron 16 of 61)"	49327	NM_001347886	55567	Hs.526500	NM_017539	ENSG00000158486	DNAH3	DNAHC3-B|DNAHC3B|HDHC8|HEL-36|HSADHC3	dynein axonemal heavy chain 3	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr16-1023	chr16	21206484	21207484	+	15.4	1000	Intergenic	AluSq2|SINE|Alu	18847	NM_003460	7783	Hs.73982	NM_003460	ENSG00000103310	ZP2	ZPA|Zp-2	zona pellucida glycoprotein 2	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr16-1026	chr16	21241110	21242110	+	16	1000	Intergenic	Intergenic	-3406	NM_145865	257629	Hs.115959	NM_145865	ENSG00000175311	ANKS4B	HARP	ankyrin repeat and sterile alpha motif domain containing 4B	protein-coding	16	3.88	4.12371134	7.91E-05
chr16-1030	chr16	22141484	22142484	+	15.4	1000	"intron (NM_173615, intron 17 of 33)"	AluJr|SINE|Alu	38125	NM_173615	146177	Hs.10697	NM_173615	ENSG00000175267	VWA3A	-	von Willebrand factor A domain containing 3A	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr16-1036	chr16	25543765	25544765	+	15.4	1000	Intergenic	AluJr4|SINE|Alu	-159082	NM_006040	9951	Hs.655275	NM_006040	ENSG00000182601	HS3ST4	3-OST-4|30ST4|3OST4|h3-OST-4	heparan sulfate-glucosamine 3-sulfotransferase 4	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr16-1038	chr16	25704019	25707441	+	53.8	3422	"intron (NM_006040, intron 1 of 1)"	"intron (NM_006040, intron 1 of 1)"	2383	NM_006040	9951	Hs.655275	NM_006040	ENSG00000182601	HS3ST4	3-OST-4|30ST4|3OST4|h3-OST-4	heparan sulfate-glucosamine 3-sulfotransferase 4	protein-coding	53.77	6.8	7.907352941	1.13E-23
chr16-1039	chr16	26308905	26309905	+	15.4	1000	Intergenic	MSTB1|LTR|ERVL-MaLR	272847	NR_036146	100422923		NR_036146	ENSG00000265005	MIR548W	-	microRNA 548w	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr16-1042	chr16	27174501	27178949	+	60.2	4448	Intergenic	Intergenic	-38082	NM_024773	79831	Hs.145717	NM_024773	ENSG00000155666	KDM8	JMJD5	lysine demethylase 8	protein-coding	60.17	13.59	4.427520235	2.02E-16
chr16-1044	chr16	28072790	28074204	+	21.8	1414	"intron (NM_001109763, intron 1 of 6)"	"intron (NM_001109763, intron 1 of 6)"	1333	NM_001323901	146395	Hs.91910	NM_144675	ENSG00000169181	GSG1L	PRO19651	GSG1 like	protein-coding	21.76	0.97	22.43298969	1.19E-17
chr16-1050	chr16	49283427	49284682	+	23	1255	Intergenic	Intergenic	31688	NM_004352	869	Hs.458423	NM_004352	ENSG00000102924	CBLN1	-	cerebellin 1 precursor	protein-coding	23.04	1.46	15.78082192	5.41E-16
chr16-1053	chr16	49570992	49571992	+	16	1000	"intron (NM_001330533, intron 3 of 5)"	"intron (NM_001330533, intron 3 of 5)"	-18996	NR_144553	1596	Hs.684517	NR_144553		ADAM3B	CYRN2	ADAM metallopeptidase domain 3B (pseudogene)	pseudo	16	0.97	16.49484536	3.54E-11
chr16-1054	chr16	49698192	49699192	+	15.4	1000	promoter-TSS (NM_001330533)	promoter-TSS (NM_001330533)	-550	NM_001330533	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr16-1057	chr16	49776977	49778520	+	26.2	1543	"intron (NM_001271620, intron 2 of 7)"	"intron (NM_001271620, intron 2 of 7)"	78901	NM_015069	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	26.24	2.91	9.017182131	6.53E-13
chr16-1058	chr16	49834406	49835730	+	21.1	1324	"intron (NM_001271620, intron 1 of 7)"	"intron (NM_001271620, intron 1 of 7)"	21581	NM_015069	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr16-1061	chr16	49964413	49965413	+	14.7	1000	Intergenic	Intergenic	-73083	NM_001271620	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr16-1065	chr16	50537909	50538909	+	16	1000	Intergenic	Intergenic	-43832	NM_033119	85407	Hs.187578	NM_033119	ENSG00000140807	NKD1	Naked1	naked cuticle homolog 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr16-1066	chr16	50553976	50555240	+	19.2	1264	Intergenic	Intergenic	-27633	NM_033119	85407	Hs.187578	NM_033119	ENSG00000140807	NKD1	Naked1	naked cuticle homolog 1	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr16-1068	chr16	50689651	50691273	+	23	1622	Intergenic	Intergenic	-12304	NR_110908	101927272	Hs.460777	NR_110908	ENSG00000260249	LOC101927272	-	uncharacterized LOC101927272	ncRNA	23.04	1.94	11.87628866	6.71E-14
chr16-1069	chr16	50849414	50850414	+	15.4	1000	Intergenic	MER41A|LTR|ERV1	73698	NR_130462	100422972		NR_130462	ENSG00000264947	MIR3181	-	microRNA 3181	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr16-107	chr16	84019565	84020886	+	26.9	1321	"intron (NM_001329749, intron 4 of 11)"	AluJb|SINE|Alu	17988	NM_001329748	54550	Hs.140950	NM_019065	ENSG00000103154	NECAB2	EFCBP2|stip-2	N-terminal EF-hand calcium binding protein 2	protein-coding	26.88	4.37	6.151029748	1.19E-10
chr16-1070	chr16	50995362	50996362	+	15.4	1000	Intergenic	MER113|DNA|hAT-Charlie	-55807	NR_110913	101927334	Hs.555184	NR_110913	ENSG00000261637	LINC02127	-	long intergenic non-protein coding RNA 2127	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr16-1072	chr16	52743050	52744050	+	16	1000	Intergenic	Intergenic	-102663	NR_033920	643714	Hs.662199	NR_033920	ENSG00000249231	CASC16	LINC00918	cancer susceptibility candidate 16 (non-protein coding)	ncRNA	16	3.88	4.12371134	7.91E-05
chr16-1073	chr16	55021127	55022127	+	16	1000	Intergenic	Intergenic	56516	NM_005853	10265	Hs.435730	NM_005853	ENSG00000176842	IRX5	HMMS|IRX-2a|IRXB2	iroquois homeobox 5	protein-coding	16	3.88	4.12371134	7.91E-05
chr16-1076	chr16	55373505	55374505	+	16	1000	Intergenic	Intergenic	15534	NM_024335	79190	Hs.369907	NM_024335	ENSG00000159387	IRX6	IRX-3|IRX7|IRXB3	iroquois homeobox 6	protein-coding	16	2.91	5.498281787	4.98E-06
chr16-1079	chr16	56556889	56558496	+	25.6	1607	Intergenic	AluJr4|SINE|Alu	-3684	NM_031885	583	Hs.333738	NM_031885	ENSG00000125124	BBS2	BBS|RP74	Bardet-Biedl syndrome 2	protein-coding	25.6	2.91	8.797250859	6.53E-13
chr16-108	chr16	85792099	85793571	+	25	1472	Intergenic	AluJr|SINE|Alu	-8146	NM_206967	404550	Hs.461655	NM_206967	ENSG00000154102	C16orf74	-	chromosome 16 open reading frame 74	protein-coding	24.96	2.43	10.27160494	2.59E-13
chr16-1089	chr16	57376471	57377471	+	16	1000	Intergenic	MER30|DNA|hAT-Charlie	-15724	NM_002990	6367	Hs.534347	NM_002990	ENSG00000102962	CCL22	A-152E5.1|ABCD-1|DC/B-CK|MDC|SCYA22|STCP-1	C-C motif chemokine ligand 22	protein-coding	16	3.4	4.705882353	2.25E-05
chr16-1090	chr16	57662839	57665192	+	32	2353	"intron (NM_001145772, intron 1 of 14)"	L2b|LINE|L2	1877	NM_001145771	9289	Hs.513633	NM_005682	ENSG00000205336	ADGRG1	BFPP|BPPR|GPR56|TM7LN4|TM7XN1	adhesion G protein-coupled receptor G1	protein-coding	32	4.85	6.597938144	5.03E-13
chr16-1091	chr16	57824143	57825143	+	14.7	1000	"intron (NM_001318715, intron 2 of 19)"	MIR|SINE|MIR	7181	NM_001318711	3801	Hs.23131	NM_005550	ENSG00000140859	KIFC3	-	kinesin family member C3	protein-coding	14.72	0	15.16333034	3.99E-13
chr16-1092	chr16	57942745	57944166	+	19.2	1421	"intron (NM_001286130, intron 25 of 32)"	AluSx|SINE|Alu	61565	NM_001135639	1258	Hs.147062	NM_001297	ENSG00000070729	CNGB1	CNCG2|CNCG3L|CNCG4|CNG4|CNGB1B|GAR1|GARP|GARP2|RCNC2|RCNCb|RCNCbeta|RP45	cyclic nucleotide gated channel beta 1	protein-coding	19.2	1.46	13.15068493	1.82E-12
chr16-1093	chr16	57960062	57961665	+	26.2	1603	"intron (NM_001286130, intron 17 of 32)"	"intron (NM_001286130, intron 17 of 32)"	44157	NM_001135639	1258	Hs.147062	NM_001297	ENSG00000070729	CNGB1	CNCG2|CNCG3L|CNCG4|CNG4|CNGB1B|GAR1|GARP|GARP2|RCNC2|RCNCb|RCNCbeta|RP45	cyclic nucleotide gated channel beta 1	protein-coding	26.24	4.85	5.410309278	4.26E-09
chr16-1096	chr16	65906919	65907919	+	16	1000	Intergenic	MLT2A2|LTR|ERVL	-297216	NR_027755	283867	Hs.444774	NM_001101346	ENSG00000261742	LINC00922	-	long intergenic non-protein coding RNA 922	ncRNA	16	0.97	16.49484536	3.54E-11
chr16-1101	chr16	66674219	66675219	+	15.4	1000	"intron (NM_178818, intron 1 of 4)"	MLT1F|LTR|ERVL-MaLR	36085	NR_037619	123920	Hs.298198	NM_144601	ENSG00000140931	CMTM3	BNAS2|CKLFSF3	CKLF like MARVEL transmembrane domain containing 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr16-1102	chr16	66731210	66732210	+	15.4	1000	Intergenic	AluJo|SINE|Alu	-1100	NM_178818	146223	Hs.643961	NM_178818	ENSG00000183723	CMTM4	CKLFSF4	CKLF like MARVEL transmembrane domain containing 4	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr16-1105	chr16	67196048	67201892	+	92.2	5844	TTS (NM_018378)	TTS (NM_018378)	1682	NM_001040667	3299	Hs.512156	NM_001538	ENSG00000102878	HSF4	CTM|CTRCT5	heat shock transcription factor 4	protein-coding	92.17	11.65	7.911587983	2.34E-39
chr16-1106	chr16	67206510	67207826	+	21.1	1316	promoter-TSS (NM_001185057)	promoter-TSS (NM_001185057)	-588	NM_001185057	8996	Hs.513667	NM_003946	ENSG00000140939	NOL3	ARC|FCM|MYP|NOP|NOP30	nucleolar protein 3	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr16-1112	chr16	71331775	71333328	+	21.1	1553	Intergenic	L2|LINE|L2	-8933	NM_001324377	55783	Hs.72782	NM_018348	ENSG00000180917	CMTR2	AFT|FTSJD1|HMTr2|MTr2	cap methyltransferase 2	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr16-1114	chr16	71432375	71433375	+	14.1	1000	Intergenic	Intergenic	40259	NM_001740	794	Hs.106857	NM_001740	ENSG00000172137	CALB2	CAB29|CAL2|CR	calbindin 2	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr16-1115	chr16	71459820	71460820	+	16.6	1000	Intergenic	CpG	35806	NM_145911	7571	Hs.656643	NM_145911	ENSG00000167377	ZNF23	KOX16|ZNF359|ZNF612|Zfp612	zinc finger protein 23	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr16-1118	chr16	72946295	72949744	+	43.5	3449	"intron (NM_001164766, intron 2 of 8)"	MIR|SINE|MIR	134255	NM_006885	463	Hs.598297	NM_006885	ENSG00000140836	ZFHX3	ATBF1|ATBT|ZNF927	zinc finger homeobox 3	protein-coding	43.53	9.71	4.483007209	1.81E-12
chr16-1119	chr16	72951756	72952756	+	16.6	1000	"intron (NM_001164766, intron 2 of 8)"	"intron (NM_001164766, intron 2 of 8)"	130018	NM_006885	463	Hs.598297	NM_006885	ENSG00000140836	ZFHX3	ATBF1|ATBT|ZNF927	zinc finger homeobox 3	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr16-1120	chr16	73081285	73082285	+	15.4	1000	"5' UTR (NM_006885, exon 1 of 10)"	"5' UTR (NM_006885, exon 1 of 10)"	489	NM_006885	463	Hs.598297	NM_006885	ENSG00000140836	ZFHX3	ATBF1|ATBT|ZNF927	zinc finger homeobox 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr16-1121	chr16	73127664	73128664	+	16.6	1000	TTS (NR_027756)	TTS (NR_027756)	1916	NR_027756	283902	Hs.382776	NM_001101347	ENSG00000260880	HCCAT5	FJ222407|HTA	hepatocellular carcinoma associated transcript 5 (non-protein coding)	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr16-1122	chr16	73514129	73515597	+	24.3	1468	Intergenic	Intergenic	94159	NR_038234	100506172	Hs.434230	NR_038234	ENSG00000258779	LINC01568	-	long intergenic non-protein coding RNA 1568	ncRNA	24.32	4.37	5.565217391	4.38E-09
chr16-1127	chr16	74235485	74236485	+	16	1000	"intron (NR_104657, intron 3 of 3)"	"intron (NR_104657, intron 3 of 3)"	13435	NR_104657	101928035	Hs.39557	NR_104657	ENSG00000261404	LOC101928035	-	uncharacterized LOC101928035	ncRNA	16	0.97	16.49484536	3.54E-11
chr16-113	chr16	3079027	3080846	+	39	1819	"intron (NM_001103175, intron 4 of 8)"	CpG-8733	-2546	NR_047572	100128770	Hs.666223	NR_047572	ENSG00000205890	LOC100128770	-	uncharacterized LOC100128770	ncRNA	39.04	9.22	4.234273319	1.94E-10
chr16-1132	chr16	79355793	79356793	+	14.1	1000	Intergenic	Intergenic	278329	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr16-1133	chr16	79478450	79479450	+	16	1000	Intergenic	AluY|SINE|Alu	155672	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding	16	3.88	4.12371134	7.91E-05
chr16-1134	chr16	79524276	79525276	+	15.4	1000	Intergenic	Intergenic	109846	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr16-1135	chr16	79587042	79588042	+	16.6	1000	Intergenic	Intergenic	47080	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr16-1136	chr16	79803320	79804591	+	19.2	1271	promoter-TSS (NR_104660)	promoter-TSS (NR_104660)	-413	NR_104660	101928248	Hs.659802	NR_104660	ENSG00000260876	LINC01229	-	long intergenic non-protein coding RNA 1229	ncRNA	19.2	2.43	7.901234568	1.91E-09
chr16-1137	chr16	80058801	80059801	+	16	1000	Intergenic	Intergenic	230155	NR_104661	101928248	Hs.659802	NR_104660	ENSG00000260876	LINC01229	-	long intergenic non-protein coding RNA 1229	ncRNA	16	1.94	8.24742268	7.67E-08
chr16-1138	chr16	80396875	80397875	+	15.4	1000	"intron (NR_120307, intron 2 of 5)"	MIR|SINE|MIR	-177256	NM_001305017	83657	Hs.98849	NM_130897	ENSG00000168589	DYNLRB2	DNCL2B|DNLC2B|ROBLD2	dynein light chain roadblock-type 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr16-1140	chr16	81197822	81198822	+	16	1000	"exon (NM_001278425, exon 9 of 33)"	"exon (NM_001278425, exon 9 of 33)"	16645	NM_001278425	114780	Hs.413525	NM_052892	ENSG00000166473	PKD1L2	PC1L2	polycystin 1 like 2 (gene/pseudogene)	protein-coding	16	3.88	4.12371134	7.91E-05
chr16-1141	chr16	82052538	82054063	+	25.6	1525	Intergenic	Intergenic	-8207	NM_145168	93517	Hs.87779	NM_145168	ENSG00000184860	SDR42E1	HSPC105	"short chain dehydrogenase/reductase family 42E, member 1"	protein-coding	25.6	2.91	8.797250859	6.53E-13
chr16-1143	chr16	82134533	82135533	+	16	1000	Intergenic	Intergenic	66175	NM_002153	3294	Hs.162795	NM_002153	ENSG00000086696	HSD17B2	EDH17B2|HSD17|SDR9C2	hydroxysteroid 17-beta dehydrogenase 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr16-1145	chr16	82304612	82305612	+	15.4	1000	Intergenic	Intergenic	-101283	NM_005792	10200	Hs.344400	NM_005792	ENSG00000135698	MPHOSPH6	MPP|MPP-6|MPP6	M-phase phosphoprotein 6	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr16-1146	chr16	82503715	82505051	+	20.5	1336	Intergenic	Intergenic	-156016	NM_001220490	1012	Hs.654386	NM_001257	ENSG00000140945	CDH13	CDHH|P105	cadherin 13	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr16-1147	chr16	82538577	82539577	+	16.6	1000	Intergenic	Intergenic	-121322	NM_001220490	1012	Hs.654386	NM_001257	ENSG00000140945	CDH13	CDHH|P105	cadherin 13	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr16-1148	chr16	82542042	82543042	+	15.4	1000	Intergenic	Intergenic	-117857	NM_001220490	1012	Hs.654386	NM_001257	ENSG00000140945	CDH13	CDHH|P105	cadherin 13	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr16-1152	chr16	83830027	83831543	+	20.5	1516	TTS (NM_001220488)	TTS (NM_001220488)	6796	NR_120308	102724163		NR_120308	ENSG00000260228	LOC102724163	-	uncharacterized LOC102724163	ncRNA	20.48	1.94	10.55670103	9.02E-12
chr16-1157	chr16	84860154	84865047	+	75.5	4893	"intron (NM_031476, intron 1 of 14)"	AluSx4|SINE|Alu	9013	NM_031476	83716	Hs.513779	NM_031476	ENSG00000103196	CRISPLD2	CRISP11|LCRISP2|LGL1	cysteine rich secretory protein LCCL domain containing 2	protein-coding	75.53	11.65	6.483261803	3.63E-28
chr16-1159	chr16	84931619	84933204	+	25	1585	"intron (NM_031476, intron 14 of 14)"	"intron (NM_031476, intron 14 of 14)"	78824	NM_031476	83716	Hs.513779	NM_031476	ENSG00000103196	CRISPLD2	CRISP11|LCRISP2|LGL1	cysteine rich secretory protein LCCL domain containing 2	protein-coding	24.96	0.97	25.73195876	2.01E-20
chr16-1163	chr16	85129239	85130239	+	16	1000	Intergenic	Intergenic	16375	NM_198491	339145	Hs.125713	NM_198491	ENSG00000153789	FAM92B	-	family with sequence similarity 92 member B	protein-coding	16	2.91	5.498281787	4.98E-06
chr16-1165	chr16	85197558	85198558	+	15.4	1000	Intergenic	Intergenic	27302	NR_033984	400548	Hs.592054	NR_033984	ENSG00000278214	LINC02139	-	long intergenic non-protein coding RNA 2139	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr16-1166	chr16	85248649	85249649	+	14.7	1000	Intergenic	L1PB3|LINE|L1	-67415	NR_038859	197196	Hs.679002	NM_153238	ENSG00000179219	LINC00311	NCRNA00311|TMEM148	long intergenic non-protein coding RNA 311	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr16-1170	chr16	85295657	85296657	+	16	1000	Intergenic	Intergenic	-20407	NR_038859	197196	Hs.679002	NM_153238	ENSG00000179219	LINC00311	NCRNA00311|TMEM148	long intergenic non-protein coding RNA 311	ncRNA	16	2.43	6.58436214	7.90E-07
chr16-1171	chr16	85304821	85308467	+	57	3646	Intergenic	AluSp|SINE|Alu	-9920	NR_038859	197196	Hs.679002	NM_153238	ENSG00000179219	LINC00311	NCRNA00311|TMEM148	long intergenic non-protein coding RNA 311	ncRNA	56.97	10.68	5.334269663	3.77E-18
chr16-1175	chr16	85899485	85900753	+	17.9	1268	Intergenic	AluJb|SINE|Alu	-32655	NM_002163	3394	Hs.137427	NM_002163	ENSG00000140968	IRF8	H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8	interferon regulatory factor 8	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr16-1182	chr16	85997554	85998554	+	16	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	46101	NR_106832	102466732		NR_106832	ENSG00000274134	MIR6774	hsa-mir-6774	microRNA 6774	ncRNA	16	2.91	5.498281787	4.98E-06
chr16-119	chr16	85174551	85178421	+	65.9	3870	"intron (NR_033984, intron 1 of 2)"	"intron (NR_033984, intron 1 of 2)"	5730	NR_033984	400548	Hs.592054	NR_033984	ENSG00000278214	LINC02139	-	long intergenic non-protein coding RNA 2139	ncRNA	65.93	9.22	7.150759219	3.03E-26
chr16-1193	chr16	86418784	86419784	+	16	1000	Intergenic	MER2|DNA|TcMar-Tigger	-39999	NR_024406	732275	Hs.558087	NR_024406	ENSG00000168367	LINC00917	-	long intergenic non-protein coding RNA 917	ncRNA	16	2.91	5.498281787	4.98E-06
chr16-1194	chr16	86514965	86516496	+	20.5	1531	"intron (NR_033925, intron 1 of 3)"	"intron (NR_033925, intron 1 of 3)"	26736	NR_036444	400550	Hs.448825	NR_033925	ENSG00000268388	FENDRR	FOXF1-AS1|TCONS_00024240|lincFOXF1|onco-lncRNA-21	FOXF1 adjacent non-coding developmental regulatory RNA	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr16-1210	chr16	87519803	87520803	+	15.4	1000	"intron (NM_015144, intron 1 of 12)"	"intron (NM_015144, intron 1 of 12)"	5157	NM_015144	23174	Hs.156231	NM_015144	ENSG00000140948	ZCCHC14	BDG-29|BDG29	zinc finger CCHC-type containing 14	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr16-1212	chr16	87569493	87574234	+	63.4	4741	Intergenic	Intergenic	44070	NR_110943	101928737	Hs.579009	NR_110943	ENSG00000260750	LOC101928737	-	uncharacterized LOC101928737	ncRNA	63.37	7.77	8.155727156	1.00E-27
chr16-1214	chr16	88352878	88353878	+	16.6	1000	Intergenic	Intergenic	125491	NR_110944	101928880	Hs.634835	NR_110944	ENSG00000260420	LOC101928880	LA16c-444G7.2	uncharacterized LOC101928880	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr16-1215	chr16	88480293	88481551	+	19.8	1258	Intergenic	Intergenic	-12957	NM_001127464	84627	Hs.54925	NM_001127464	ENSG00000225614	ZNF469	BCS|BCS1	zinc finger protein 469	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr16-1217	chr16	89639758	89641117	+	21.8	1359	Intergenic	Intergenic	-1739	NM_014427	27132	Hs.461775	NM_014427	ENSG00000178773	CPNE7	-	copine 7	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr16-1220	chr16	122675	123675	+	14.7	1000	promoter-TSS (NM_022450)	promoter-TSS (NM_022450)	-546	NM_022450	64285	Hs.744992	NM_022450	ENSG00000007384	RHBDF1	C16orf8|Dist1|EGFR-RS|gene-89|gene-90|hDist1	rhomboid 5 homolog 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr16-1223	chr16	1099664	1100664	+	15.4	1000	Intergenic	MIRb|SINE|MIR	-22592	NM_001172560	6755	Hs.449840	NM_001053	ENSG00000162009	SSTR5	SS-5-R	somatostatin receptor 5	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr16-1227	chr16	1927067	1928350	+	19.8	1283	TTS (NR_033914)	TTS (NR_033914)	-5529	NM_001163560	254528	Hs.729604	NM_152764	ENSG00000162039	MEIOB	C16orf73|gs129	meiosis specific with OB domains	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr16-1228	chr16	2335128	2336128	+	16	1000	"exon (NM_001089, exon 23 of 33)"	"exon (NM_001089, exon 23 of 33)"	11007	NR_039868	100616241		NR_039868	ENSG00000264004	MIR4717	-	microRNA 4717	ncRNA	16	2.43	6.58436214	7.90E-07
chr16-1229	chr16	2371241	2375026	+	45.4	3785	"intron (NM_001089, intron 7 of 32)"	L1P1|LINE|L1	17614	NM_001089	21	Hs.26630	NM_001089	ENSG00000167972	ABCA3	ABC-C|ABC3|EST111653|LBM180|SMDP3	ATP binding cassette subfamily A member 3	protein-coding	45.45	8.74	5.200228833	2.02E-14
chr16-1240	chr16	3160373	3161373	+	14.7	1000	"non-coding (NR_024166, exon 3 of 3)"	"non-coding (NR_024166, exon 3 of 3)"	-1690	NM_001042428	7755	Hs.592088	NM_003456	ENSG00000122386	ZNF205	RhitH|ZNF210|Zfp13	zinc finger protein 205	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr16-1245	chr16	4030978	4032331	+	22.4	1353	"intron (NM_001116, intron 7 of 10)"	AluSq2|SINE|Alu	-31209	NR_120311	102724927	Hs.364739	NR_120311	ENSG00000262185	LOC102724927	-	uncharacterized LOC102724927	ncRNA	22.4	2.91	7.697594502	3.87E-10
chr16-1247	chr16	4065125	4066125	+	15.4	1000	"intron (NM_001116, intron 2 of 10)"	"intron (NM_001116, intron 2 of 10)"	-65180	NR_120311	102724927	Hs.364739	NR_120311	ENSG00000262185	LOC102724927	-	uncharacterized LOC102724927	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr16-1251	chr16	4257277	4258277	+	15.4	1000	"5' UTR (NM_001323668, exon 2 of 7)"	"5' UTR (NM_001323668, exon 2 of 7)"	34304	NM_001098814	6345	Hs.10041	NM_001098814	ENSG00000185739	SRL	-	sarcalumenin	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr16-1258	chr16	5383862	5384862	+	16	1000	Intergenic	LTR19A|LTR|ERV1	-236541	NM_001289029	196483	Hs.406461	NM_201400	ENSG00000118894	EEF2KMT	FAM86A|SB153|eEF2-KMT	eukaryotic elongation factor 2 lysine methyltransferase	protein-coding	16	2.91	5.498281787	4.98E-06
chr16-1262	chr16	8543559	8544838	+	19.8	1279	Intergenic	Intergenic	43630	NM_001290098	283953	Hs.150849	NM_001146336	ENSG00000232258	TMEM114	-	transmembrane protein 114	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr16-1264	chr16	9884326	9885326	+	15.4	1000	"intron (NM_000833, intron 12 of 13)"	"intron (NM_000833, intron 12 of 13)"	-335464	NR_126349	104266959	Hs.578888	NR_126349	ENSG00000261075	LINC01195	-	long intergenic non-protein coding RNA 1195	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr16-1265	chr16	10711223	10712223	+	16	1000	Intergenic	Intergenic	-37150	NM_001424	2013	Hs.531561	NM_001424	ENSG00000213853	EMP2	XMP	epithelial membrane protein 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr16-1266	chr16	10879817	10881079	+	22.4	1262	"intron (NM_001318873, intron 2 of 7)"	"intron (NM_001318873, intron 2 of 7)"	32203	NR_134903	780776	Hs.371576	NM_001079512	ENSG00000166676	TVP23A	FAM18A|YDR084C	trans-golgi network vesicle protein 23 homolog A	protein-coding	22.4	2.43	9.218106996	2.49E-11
chr16-1272	chr16	11496879	11497879	+	15.4	1000	Intergenic	Intergenic	58084	NM_152308	116028	Hs.347524	NM_152308	ENSG00000175643	RMI2	BLAP18|C16orf75	RecQ mediated genome instability 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr16-1273	chr16	11620824	11621824	+	16	1000	Intergenic	Intergenic	58905	NM_004862	9516	Hs.459940	NM_004862	ENSG00000189067	LITAF	PIG7|SIMPLE|TP53I7	lipopolysaccharide induced TNF factor	protein-coding	16	2.91	5.498281787	4.98E-06
chr16-1276	chr16	15593835	15594835	+	15.4	1000	"intron (NM_033201, intron 1 of 5)"	"intron (NM_033201, intron 1 of 5)"	-1788	NM_001142469	89927	Hs.401798	NM_033201	ENSG00000166780	C16orf45	MINP	chromosome 16 open reading frame 45	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr16-1278	chr16	17747406	17748698	+	17.3	1292	Intergenic	MLT1K|LTR|ERVL-MaLR	-183314	NM_022166	64131	Hs.22907	NM_022166	ENSG00000103489	XYLT1	DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I	xylosyltransferase 1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr16-1279	chr16	17787299	17788587	+	19.8	1288	Intergenic	AluSq2|SINE|Alu	-223205	NM_022166	64131	Hs.22907	NM_022166	ENSG00000103489	XYLT1	DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I	xylosyltransferase 1	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr16-1282	chr16	18111590	18112590	+	14.7	1000	Intergenic	MIRc|SINE|MIR	314429	NM_001282511	101059953	Hs.636569	NM_001282511	ENSG00000214940	NPIPA8	LCR16a9	nuclear pore complex interacting protein family member A8	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr16-1283	chr16	19074094	19075094	+	15.4	1000	"non-coding (NR_136733, exon 15 of 15)"	"non-coding (NR_136733, exon 15 of 15)"	4211	NR_119382	102723385	Hs.569608	NR_119379	ENSG00000261465	LOC102723385	-	uncharacterized LOC102723385	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr16-1284	chr16	19149930	19150930	+	16	1000	Intergenic	Intergenic	25176	NR_028028	162073	Hs.530899	NM_001034841	ENSG00000205730	ITPRIPL2	-	"inositol 1,4,5-trisphosphate receptor interacting protein like 2"	protein-coding	16	1.94	8.24742268	7.67E-08
chr16-1285	chr16	19204788	19205788	+	16	1000	"intron (NM_001330509, intron 5 of 7)"	LTR16C|LTR|ERVL	21609	NM_001308157	51760	Hs.258326	NM_016524	ENSG00000103528	SYT17	sytXVII	synaptotagmin 17	protein-coding	16	2.91	5.498281787	4.98E-06
chr16-1286	chr16	20054810	20055810	+	16	1000	"intron (NM_001002911, intron 1 of 1)"	MIRb|SINE|MIR	29790	NM_001002911	124274	Hs.446875	NM_001002911	ENSG00000180269	GPR139	GPRg1|PGR3	G protein-coupled receptor 139	protein-coding	16	3.4	4.705882353	2.25E-05
chr16-1287	chr16	20443813	20444813	+	16	1000	"intron (NM_001324371, intron 10 of 13)"	AluSz6|SINE|Alu	-18470	NM_001308954	123876	Hs.298252	NM_001010845	ENSG00000183747	ACSM2A	A-923A4.1|ACSM2	acyl-CoA synthetase medium-chain family member 2A	protein-coding	16	3.88	4.12371134	7.91E-05
chr16-129	chr16	15050803	15052069	+	23.7	1266	Intergenic	AluJr|SINE|Alu	-17156	NM_001285447	23042	Hs.370781	NM_015027	ENSG00000179889	PDXDC1	LP8165	pyridoxal dependent decarboxylase domain containing 1	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr16-1290	chr16	21294838	21297083	+	34.6	2245	"intron (NM_001888, intron 1 of 9)"	L1PA16|LINE|L1	-16210	NR_026675	400508	Hs.578949	NM_001101368		CRYM-AS1	NCRNA00169	CRYM antisense RNA 1	ncRNA	34.56	7.28	4.747252747	9.40E-11
chr16-1296	chr16	22917402	22922259	+	63.4	4857	"intron (NM_006043, intron 1 of 1)"	MSTC|LTR|ERVL-MaLR	93970	NM_006043	9956	Hs.115830	NM_006043	ENSG00000122254	HS3ST2	30ST2|3OST2	heparan sulfate-glucosamine 3-sulfotransferase 2	protein-coding	63.37	15.53	4.080489375	1.52E-15
chr16-1298	chr16	23171137	23172137	+	16	1000	Intergenic	LTR19A|LTR|ERV1	-11046	NM_020718	57478	Hs.183817	NM_020718	ENSG00000103404	USP31	-	ubiquitin specific peptidase 31	protein-coding	16	2.91	5.498281787	4.98E-06
chr16-1301	chr16	24354583	24355583	+	15.4	1000	"intron (NM_006539, intron 1 of 3)"	MIR|SINE|MIR	88209	NM_006539	10368	Hs.7235	NM_006539	ENSG00000006116	CACNG3	-	calcium voltage-gated channel auxiliary subunit gamma 3	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr16-1306	chr16	27011032	27012032	+	16	1000	Intergenic	Intergenic	-66687	NM_001145545	162083	Hs.120831	NM_182831	ENSG00000234186	C16orf82	TNT	chromosome 16 open reading frame 82	protein-coding	16	0.97	16.49484536	3.54E-11
chr16-1310	chr16	27841261	27842261	+	15.4	1000	"intron (NM_001109763, intron 4 of 6)"	"intron (NM_001109763, intron 4 of 6)"	57717	NM_144675	146395	Hs.91910	NM_144675	ENSG00000169181	GSG1L	PRO19651	GSG1 like	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr16-1313	chr16	27947639	27948639	+	16	1000	"intron (NM_001109763, intron 2 of 6)"	"intron (NM_001109763, intron 2 of 6)"	-48661	NM_144675	146395	Hs.91910	NM_144675	ENSG00000169181	GSG1L	PRO19651	GSG1 like	protein-coding	16	0.97	16.49484536	3.54E-11
chr16-1314	chr16	31020492	31023262	+	33.3	2770	promoter-TSS (NM_052874)	promoter-TSS (NM_052874)	82	NM_052874	112755	Hs.542230	NM_052874	ENSG00000099365	STX1B	GEFSP9|STX1B1|STX1B2	syntaxin 1B	protein-coding	33.28	3.88	8.577319588	4.55E-16
chr16-1316	chr16	31226779	31228311	+	24.3	1532	"intron (NM_152901, intron 1 of 1)"	CpG-9147	869	NM_152901	260434	Hs.58314	NM_152901	ENSG00000169900	PYDC1	ASC2|POP1|PYC1|cPOP1	pyrin domain containing 1	protein-coding	24.32	4.37	5.565217391	4.38E-09
chr16-1318	chr16	32126722	32127722	+	16	1000	Intergenic	CpG	72212	NR_109773	100289574	Hs.531536	NR_109773		HERC2P4	D16F37S5	hect domain and RLD 2 pseudogene 4	pseudo	16	0.97	16.49484536	3.54E-11
chr16-1335	chr16	49830902	49831902	+	15.4	1000	"intron (NM_001271620, intron 1 of 7)"	"intron (NM_001271620, intron 1 of 7)"	25247	NM_015069	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr16-1336	chr16	49866012	49867589	+	22.4	1577	"intron (NM_001271620, intron 1 of 7)"	MER102b|DNA|hAT-Charlie	-10151	NM_015069	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr16-1337	chr16	49888666	49891700	+	35.8	3034	"intron (NM_001271620, intron 1 of 7)"	CpG	1647	NM_001271620	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	35.84	0.97	36.94845361	6.64E-34
chr16-1339	chr16	49913262	49915467	+	37.1	2205	Intergenic	(CAAA)n|Simple_repeat|Simple_repeat	-22534	NM_001271620	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	37.12	3.88	9.567010309	5.72E-19
chr16-1341	chr16	49961191	49962191	+	15.4	1000	Intergenic	MLT1G1|LTR|ERVL-MaLR	-69861	NM_001271620	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr16-1342	chr16	50003360	50004925	+	22.4	1565	Intergenic	Intergenic	-54975	NM_153261	255919	Hs.59134	NM_153261	ENSG00000205423	CNEP1R1	C16orf69|NEP1-R1|NEP1R1|TMEM188|TMP125	CTD nuclear envelope phosphatase 1 regulatory subunit 1	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr16-1346	chr16	50495146	50496583	+	19.8	1437	Intergenic	Intergenic	-86377	NM_033119	85407	Hs.187578	NM_033119	ENSG00000140807	NKD1	Naked1	naked cuticle homolog 1	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr16-1352	chr16	50658357	50661078	+	34.6	2721	"intron (NM_033119, intron 6 of 9)"	"intron (NM_033119, intron 6 of 9)"	-43049	NR_110908	101927272	Hs.460777	NR_110908	ENSG00000260249	LOC101927272	-	uncharacterized LOC101927272	ncRNA	34.56	6.31	5.477020602	4.08E-12
chr16-1355	chr16	51094937	51095937	+	15.4	1000	Intergenic	MER99|DNA|hAT?	43768	NR_110913	101927334	Hs.555184	NR_110913	ENSG00000261637	LINC02127	-	long intergenic non-protein coding RNA 2127	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr16-1357	chr16	52037525	52038525	+	13.4	1000	Intergenic	Intergenic	69822	NM_001242473	388276	Hs.534669	NM_001242473		C16orf97	-	chromosome 16 open reading frame 97	protein-coding	13.44	1.46	9.205479452	3.57E-07
chr16-1358	chr16	53557504	53558504	+	14.1	1000	Intergenic	L2a|LINE|L2	-20788	NM_001012398	64400	Hs.380897	NM_022476	ENSG00000166971	AKTIP	FT1|FTS	AKT interacting protein	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr16-1360	chr16	55078683	55079683	+	15.4	1000	Intergenic	Intergenic	114072	NM_005853	10265	Hs.435730	NM_005853	ENSG00000176842	IRX5	HMMS|IRX-2a|IRXB2	iroquois homeobox 5	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr16-1361	chr16	55178944	55179944	+	16	1000	Intergenic	Intergenic	-179027	NM_024335	79190	Hs.369907	NM_024335	ENSG00000159387	IRX6	IRX-3|IRX7|IRXB3	iroquois homeobox 6	protein-coding	16	3.88	4.12371134	7.91E-05
chr16-1362	chr16	56303204	56304204	+	15.4	1000	"intron (NM_020988, intron 2 of 8)"	"intron (NM_020988, intron 2 of 8)"	24272	NR_037499	100500891		NR_037499	ENSG00000265281	MIR3935	-	microRNA 3935	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr16-1363	chr16	56356789	56357789	+	16	1000	"intron (NM_020988, intron 3 of 8)"	MLT1J|LTR|ERVL-MaLR	77857	NR_037499	100500891		NR_037499	ENSG00000265281	MIR3935	-	microRNA 3935	ncRNA	16	3.88	4.12371134	7.91E-05
chr16-1364	chr16	56362034	56363034	+	15.4	1000	"intron (NM_020988, intron 3 of 8)"	"intron (NM_020988, intron 3 of 8)"	83102	NR_037499	100500891		NR_037499	ENSG00000265281	MIR3935	-	microRNA 3935	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr16-1365	chr16	56375812	56376812	+	16	1000	"intron (NM_138736, intron 7 of 7)"	"intron (NM_138736, intron 7 of 7)"	82595	NM_001323511	267	Hs.295137	NM_001144	ENSG00000159461	AMFR	GP78|RNF45	autocrine motility factor receptor	protein-coding	16	3.4	4.705882353	2.25E-05
chr16-137	chr16	66387949	66389215	+	27.5	1266	Intergenic	Intergenic	-11928	NM_001795	1003	Hs.76206	NM_001795	ENSG00000179776	CDH5	7B4|CD144	cadherin 5	protein-coding	27.52	6.31	4.36133122	6.42E-08
chr16-1377	chr16	56994489	56995489	+	15.4	1000	promoter-TSS (NM_000078)	promoter-TSS (NM_000078)	-846	NM_000078	1071	Hs.89538	NM_000078	ENSG00000087237	CETP	BPIFF|HDLCQ10	cholesteryl ester transfer protein	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr16-1378	chr16	57124942	57128233	+	57.6	3291	"5' UTR (NM_152727, exon 1 of 16)"	"5' UTR (NM_152727, exon 1 of 16)"	132	NM_152727	221184	Hs.339809	NM_152727	ENSG00000140848	CPNE2	COPN2|CPN2	copine 2	protein-coding	57.61	4.85	11.87835052	2.29E-32
chr16-1379	chr16	57317549	57318549	+	15.4	1000	"intron (NM_015993, intron 1 of 3)"	CpG	535	NM_015993	51090	Hs.632215	NM_015993	ENSG00000102934	PLLP	PMLP|TM4SF11	plasmolipin	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr16-138	chr16	84232534	84233794	+	25.6	1260	Intergenic	Intergenic	8441	NM_139174	161931	Hs.8977	NM_139174	ENSG00000140955	ADAD2	TENRL	adenosine deaminase domain containing 2	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr16-1380	chr16	57399068	57400373	+	19.2	1305	"3' UTR (NM_002990, exon 3 of 3)"	"3' UTR (NM_002990, exon 3 of 3)"	-6653	NM_001304392	6376	Hs.531668	NM_002996	ENSG00000006210	CX3CL1	ABCD-3|C3Xkine|CXC3|CXC3C|NTN|NTT|SCYD1|fractalkine|neurotactin	C-X3-C motif chemokine ligand 1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr16-1381	chr16	57518380	57519380	+	16	1000	"intron (NM_018110, intron 1 of 8)"	L2a|LINE|L2	1505	NM_018110	55715	Hs.279832	NM_018110	ENSG00000125170	DOK4	IRS-5|IRS5	docking protein 4	protein-coding	16	2.91	5.498281787	4.98E-06
chr16-1383	chr16	57906438	57907438	+	15.4	1000	Intergenic	AluSz|SINE|Alu	62389	NM_001278081	388282	Hs.434720	NM_001278081		LOC388282	-	uncharacterized LOC388282	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr16-1386	chr16	58235904	58236904	+	16	1000	Intergenic	L1ME4a|LINE|L1	-4622	NM_001896	1459	Hs.82201	NM_001896	ENSG00000070770	CSNK2A2	CK2A2|CK2alpha'|CSNK2A1	casein kinase 2 alpha 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr16-1388	chr16	66159555	66164642	+	99.9	5087	Intergenic	Intergenic	-238412	NM_001795	1003	Hs.76206	NM_001795	ENSG00000179776	CDH5	7B4|CD144	cadherin 5	protein-coding	99.85	17.47	5.715512307	4.36E-33
chr16-1391	chr16	66174778	66176295	+	24.3	1517	Intergenic	MIRb|SINE|MIR	-224974	NM_001795	1003	Hs.76206	NM_001795	ENSG00000179776	CDH5	7B4|CD144	cadherin 5	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr16-1395	chr16	66359862	66361538	+	25.6	1676	Intergenic	Intergenic	-39810	NM_001795	1003	Hs.76206	NM_001795	ENSG00000179776	CDH5	7B4|CD144	cadherin 5	protein-coding	25.6	5.82	4.39862543	7.99E-08
chr16-1399	chr16	66981984	66984233	+	30.7	2249	Intergenic	Intergenic	-12024	NM_001185177	23491	Hs.268700	NM_012122	ENSG00000172828	CES3	ES31	carboxylesterase 3	protein-coding	30.72	2.91	10.55670103	6.73E-17
chr16-1400	chr16	67439830	67442766	+	49.3	2936	"intron (NM_013304, intron 2 of 10)"	"intron (NM_013304, intron 2 of 10)"	9041	NM_013304	29800	Hs.624541	NM_013304	ENSG00000159714	ZDHHC1	C16orf1|HSU90653|ZNF377	zinc finger DHHC-type containing 1	protein-coding	49.29	8.74	5.639588101	1.25E-16
chr16-1402	chr16	68692287	68693287	+	14.7	1000	"intron (NM_001793, intron 2 of 15)"	MER5B|DNA|hAT-Charlie	14048	NM_001317196	1001	Hs.191842	NM_001793	ENSG00000062038	CDH3	CDHP|HJMD|PCAD	cadherin 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr16-1403	chr16	68819320	68820320	+	15.4	1000	"intron (NM_004360, intron 2 of 15)"	"intron (NM_004360, intron 2 of 15)"	43401	NR_106988	102465753		NR_106988	ENSG00000280494	MIR7641-2	B-ATF|hsa-mir-7641-2	microRNA 7641-2	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr16-1405	chr16	71428566	71429566	+	16	1000	Intergenic	ORSL|DNA|hAT-Tip100	36450	NM_001740	794	Hs.106857	NM_001740	ENSG00000172137	CALB2	CAB29|CAL2|CR	calbindin 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr16-1408	chr16	73031038	73032038	+	16	1000	"intron (NM_006885, intron 1 of 9)"	"intron (NM_006885, intron 1 of 9)"	50736	NM_006885	463	Hs.598297	NM_006885	ENSG00000140836	ZFHX3	ATBF1|ATBT|ZNF927	zinc finger homeobox 3	protein-coding	16	0.97	16.49484536	3.54E-11
chr16-1411	chr16	73574530	73582272	+	106.3	7742	Intergenic	Intergenic	157697	NR_038234	100506172	Hs.434230	NR_038234	ENSG00000258779	LINC01568	-	long intergenic non-protein coding RNA 1568	ncRNA	106.25	17.47	6.081854608	5.86E-37
chr16-1415	chr16	73647171	73648171	+	14.7	1000	Intergenic	Intergenic	226967	NR_038234	100506172	Hs.434230	NR_038234	ENSG00000258779	LINC01568	-	long intergenic non-protein coding RNA 1568	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr16-1417	chr16	74125607	74126607	+	14.1	1000	Intergenic	Intergenic	123313	NR_104657	101928035	Hs.39557	NR_104657	ENSG00000261404	LOC101928035	-	uncharacterized LOC101928035	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr16-1421	chr16	75231539	75232938	+	21.1	1399	Intergenic	Intergenic	8834	NM_001025200	440387	Hs.610926	NM_001025200	ENSG00000168928	CTRB2	-	chymotrypsinogen B2	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr16-1424	chr16	77428099	77429099	+	14.7	1000	"intron (NM_199355, intron 3 of 22)"	"intron (NM_199355, intron 3 of 22)"	40412	NM_001326358	170692	Hs.188746	NM_139054	ENSG00000140873	ADAMTS18	ADAMTS21|KNO2|MMCAT	ADAM metallopeptidase with thrombospondin type 1 motif 18	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr16-1425	chr16	78095518	78096518	+	16	1000	Intergenic	MER106B|DNA|hAT-Charlie	33032	NM_001244755	10143	Hs.177936	NM_005752	ENSG00000166509	CLEC3A	CLECSF1	C-type lectin domain family 3 member A	protein-coding	16	3.88	4.12371134	7.91E-05
chr16-1427	chr16	79329593	79330593	+	14.1	1000	Intergenic	MIR|SINE|MIR	304529	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr16-1428	chr16	79591892	79592892	+	15.4	1000	Intergenic	Intergenic	42230	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr16-1435	chr16	80541678	80542678	+	15.4	1000	"intron (NR_120307, intron 2 of 5)"	AluJb|SINE|Alu	-32453	NM_001305017	83657	Hs.98849	NM_130897	ENSG00000168589	DYNLRB2	DNCL2B|DNLC2B|ROBLD2	dynein light chain roadblock-type 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr16-1437	chr16	80786549	80787549	+	14.7	1000	"intron (NM_152342, intron 1 of 6)"	L1MEg|LINE|L1	51126	NM_152342	124359	Hs.60257	NM_152342	ENSG00000166446	CDYL2	PCCP1	chromodomain Y-like 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr16-1438	chr16	80827796	80828796	+	15.4	1000	"intron (NM_152342, intron 1 of 6)"	"intron (NM_152342, intron 1 of 6)"	9879	NM_152342	124359	Hs.60257	NM_152342	ENSG00000166446	CDYL2	PCCP1	chromodomain Y-like 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr16-1442	chr16	80970041	80971041	+	16	1000	Intergenic	Intergenic	-44048	NR_131948	100996425	Hs.125350	NR_131947	ENSG00000260896	PRCAT47	-	prostate cancer-associated 47	ncRNA	16	2.91	5.498281787	4.98E-06
chr16-1445	chr16	82701965	82703814	+	30.7	1849	"intron (NM_001220488, intron 2 of 14)"	"intron (NM_001220488, intron 2 of 14)"	-19647	NR_107025	102465863		NR_107025	ENSG00000277387	MIR8058	hsa-mir-8058	microRNA 8058	ncRNA	30.72	4.85	6.334020619	3.34E-12
chr16-1448	chr16	83727478	83728478	+	15.4	1000	"intron (NM_001257, intron 10 of 13)"	"intron (NM_001257, intron 10 of 13)"	109603	NR_120308	102724163		NR_120308	ENSG00000260228	LOC102724163	-	uncharacterized LOC102724163	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr16-145	chr16	89005980	89007543	+	30.7	1563	"intron (NM_001290330, intron 1 of 1)"	CpG	316	NM_001290330	100129697	Hs.689377	NM_001290330		LOC100129697	-	uncharacterized LOC100129697	protein-coding	30.72	6.31	4.868462758	6.13E-10
chr16-1452	chr16	84361558	84363200	+	27.5	1642	"intron (NM_001282467, intron 6 of 6)"	AluJb|SINE|Alu	34067	NM_001282466	58189	Hs.36688	NM_021197	ENSG00000103175	WFDC1	PS20	WAP four-disulfide core domain 1	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr16-1454	chr16	84425161	84426161	+	16	1000	"intron (NM_014861, intron 1 of 26)"	"intron (NM_014861, intron 1 of 26)"	-14533	NM_001291454	9914	Hs.6168	NM_014861	ENSG00000064270	ATP2C2	SPCA2	ATPase secretory pathway Ca2+ transporting 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr16-1456	chr16	84458369	84459369	+	16	1000	"intron (NM_001291454, intron 7 of 23)"	L2b|LINE|L2	18675	NM_001291454	9914	Hs.6168	NM_014861	ENSG00000064270	ATP2C2	SPCA2	ATPase secretory pathway Ca2+ transporting 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr16-1471	chr16	85392690	85393690	+	16	1000	Intergenic	MIR|SINE|MIR	-53259	NR_049816	100847022		NR_049816	ENSG00000266307	MIR5093	-	microRNA 5093	ncRNA	16	2.91	5.498281787	4.98E-06
chr16-1476	chr16	85846134	85847134	+	16	1000	Intergenic	AluJr|SINE|Alu	13330	NM_001318797	1327	Hs.433419	NM_001861	ENSG00000131143	COX4I1	COX IV-1|COX4|COX4-1|COXIV|COXIV-1	cytochrome c oxidase subunit 4I1	protein-coding	16	1.94	8.24742268	7.67E-08
chr16-1479	chr16	86033662	86035982	+	35.2	2320	Intergenic	MER5C|DNA|hAT-Charlie	82869	NR_106832	102466732		NR_106832	ENSG00000274134	MIR6774	hsa-mir-6774	microRNA 6774	ncRNA	35.2	7.77	4.53024453	3.74E-10
chr16-1481	chr16	86170521	86172225	+	25.6	1704	Intergenic	MLT1J2|LTR|ERVL-MaLR	-58414	NR_103859	100506542	Hs.111902	NR_103859	ENSG00000269186	LINC01082	TCONS_00024492	long intergenic non-protein coding RNA 1082	ncRNA	25.6	3.88	6.597938144	1.00E-10
chr16-1487	chr16	86307269	86308269	+	14.7	1000	"intron (NR_104139, intron 2 of 5)"	LTR16C|LTR|ERVL	12084	NR_104139	101154687	Hs.640512	NR_104139		LINC01081	TCONS00024764|TCONS_00024764	long intergenic non-protein coding RNA 1081	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr16-1489	chr16	86315176	86316176	+	15.4	1000	"intron (NR_104139, intron 1 of 5)"	"intron (NR_104139, intron 1 of 5)"	4177	NR_104139	101154687	Hs.640512	NR_104139		LINC01081	TCONS00024764|TCONS_00024764	long intergenic non-protein coding RNA 1081	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr16-1490	chr16	86321405	86326067	+	73.6	4662	"intron (NR_038438, intron 1 of 2)"	"intron (NR_038438, intron 1 of 2)"	3699	NR_038438	146513	Hs.434338	NR_038438	ENSG00000268532	LINC02135	-	long intergenic non-protein coding RNA 2135	ncRNA	73.61	14.56	5.055631868	5.44E-22
chr16-1494	chr16	86413497	86414497	+	15.4	1000	Intergenic	MLT1C-int|LTR|ERVL-MaLR	-34712	NR_024406	732275	Hs.558087	NR_024406	ENSG00000168367	LINC00917	-	long intergenic non-protein coding RNA 917	ncRNA	15.36	0.49	31.34693878	1.26E-14
chr16-1506	chr16	86730526	86731793	+	19.2	1267	Intergenic	AluSz|SINE|Alu	24406	NR_135181	101928614	Hs.399823	NR_135181	ENSG00000260026	LOC101928614	-	uncharacterized LOC101928614	ncRNA	19.2	4.37	4.393592677	3.16E-06
chr16-1508	chr16	86786447	86787447	+	16	1000	Intergenic	Intergenic	31250	NR_135183	102724344	Hs.585769	NR_135182	ENSG00000261175	LOC102724344	-	uncharacterized LOC102724344	ncRNA	16	3.4	4.705882353	2.25E-05
chr16-1509	chr16	86796281	86797865	+	24.3	1584	Intergenic	Intergenic	41376	NR_135183	102724344	Hs.585769	NR_135182	ENSG00000261175	LOC102724344	-	uncharacterized LOC102724344	ncRNA	24.32	0.97	25.07216495	2.01E-20
chr16-1513	chr16	87122882	87123882	+	16	1000	Intergenic	Intergenic	31992	NR_126008	440390	Hs.513789	NR_126008	ENSG00000232190	LOC440390	-	uncharacterized LOC440390	ncRNA	16	1.94	8.24742268	7.67E-08
chr16-1516	chr16	87485600	87486852	+	17.3	1252	"intron (NM_015144, intron 2 of 12)"	"intron (NM_015144, intron 2 of 12)"	39234	NM_015144	23174	Hs.156231	NM_015144	ENSG00000140948	ZCCHC14	BDG-29|BDG29	zinc finger CCHC-type containing 14	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr16-1519	chr16	87587166	87588166	+	16	1000	Intergenic	MLT1A0|LTR|ERVL-MaLR	-47775	NR_073379	57338	Hs.592068	NM_020655	ENSG00000154118	JPH3	CAGL237|HDL2|JP-3|JP3|TNRC22	junctophilin 3	protein-coding	16	2.43	6.58436214	7.90E-07
chr16-152	chr16	3060532	3063043	+	42.9	2511	promoter-TSS (NM_020982)	promoter-TSS (NM_020982)	-670	NM_020982	9080	Hs.296949	NM_020982	ENSG00000213937	CLDN9	-	claudin 9	protein-coding	42.89	4.85	8.843298969	3.69E-20
chr16-1520	chr16	87668836	87669836	+	15.4	1000	"intron (NM_020655, intron 1 of 4)"	"intron (NM_020655, intron 1 of 4)"	32843	NM_001271605	57338	Hs.592068	NM_020655	ENSG00000154118	JPH3	CAGL237|HDL2|JP-3|JP3|TNRC22	junctophilin 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr16-1524	chr16	87979829	87980829	+	15.4	1000	Intergenic	Intergenic	-4709	NM_001173540	54971	Hs.461705	NM_017869	ENSG00000172530	BANP	BEND1|SMAR1|SMARBP1	BTG3 associated nuclear protein	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr16-1525	chr16	88271402	88272402	+	16	1000	Intergenic	Intergenic	44015	NR_110944	101928880	Hs.634835	NR_110944	ENSG00000260420	LOC101928880	LA16c-444G7.2	uncharacterized LOC101928880	ncRNA	16	1.46	10.95890411	3.44E-09
chr16-1531	chr16	88935078	88938236	+	54.4	3158	Intergenic	AluSx1|SINE|Alu	-3589	NM_001080487	390748	Hs.730522	NM_001080487	ENSG00000205022	PABPN1L	PABPNL1|ePABP2	"poly(A) binding protein nuclear 1 like, cytoplasmic"	protein-coding	54.41	4.85	11.2185567	3.60E-29
chr16-1533	chr16	116334	119017	+	41.6	2683	"intron (NM_022450, intron 1 of 17)"	"intron (NM_022450, intron 1 of 17)"	4954	NM_022450	64285	Hs.744992	NM_022450	ENSG00000007384	RHBDF1	C16orf8|Dist1|EGFR-RS|gene-89|gene-90|hDist1	rhomboid 5 homolog 1	protein-coding	41.61	9.71	4.285272915	3.58E-11
chr16-1538	chr16	1030359	1031359	+	14.7	1000	promoter-TSS (NM_014587)	promoter-TSS (NM_014587)	459	NR_033645	64788	Hs.71912	NM_022773	ENSG00000103227	LMF1	C16orf26|HMFN1876|JFP11|TMEM112|TMEM112A	lipase maturation factor 1	protein-coding	14.72	0	15.16333034	3.99E-13
chr16-1539	chr16	1046415	1049563	+	48	3148	Intergenic	CpG	16181	NM_014587	30812	Hs.243678	NM_014587	ENSG00000005513	SOX8	-	SRY-box 8	protein-coding	48.01	8.25	5.819393939	1.22E-16
chr16-1541	chr16	1172235	1175905	+	51.2	3670	Intergenic	Intergenic	-27826	NM_207419	390664	Hs.527853	NM_207419	ENSG00000184471	C1QTNF8	CTRP8|UNQ5829	C1q and tumor necrosis factor related protein 8	protein-coding	51.21	6.8	7.530882353	6.93E-22
chr16-1545	chr16	1901315	1902315	+	14.7	1000	"intron (NM_152764, intron 9 of 12)"	"intron (NM_152764, intron 9 of 12)"	20287	NM_152764	254528	Hs.729604	NM_152764	ENSG00000162039	MEIOB	C16orf73|gs129	meiosis specific with OB domains	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr16-1550	chr16	2082053	2083053	+	15.4	1000	promoter-TSS (NM_001252073)	promoter-TSS (NM_001252073)	-712	NM_001252073	9351	Hs.440896	NM_004785	ENSG00000065054	SLC9A3R2	E3KARP|NHE3RF2|NHERF-2|NHERF2|OCTS2|SIP-1|SIP1|TKA-1	SLC9A3 regulator 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr16-1551	chr16	2197013	2198013	+	14.7	1000	promoter-TSS (NM_001308053)	promoter-TSS (NM_001308053)	-632	NM_001308053	25837	Hs.3797	NM_014353	ENSG00000167964	RAB26	V46133	"RAB26, member RAS oncogene family"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr16-1552	chr16	2242620	2243620	+	14.1	1000	"intron (NM_020764, intron 1 of 19)"	AluSp|SINE|Alu	3345	NM_020764	57524	Hs.643537	NM_020764	ENSG00000167971	CASKIN1	ANKS5A	CASK interacting protein 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr16-1557	chr16	2517508	2522460	+	67.2	4952	Intergenic	Intergenic	-1516	NM_006181	4917	Hs.158336	NM_006181	ENSG00000162068	NTN3	NTN2L	netrin 3	protein-coding	67.21	11.16	6.022401434	1.96E-23
chr16-1558	chr16	2792279	2793279	+	15.4	1000	"intron (NR_027274, intron 2 of 5)"	"intron (NR_027274, intron 2 of 5)"	2019	NR_027274	100128788	Hs.311208	NR_027274	ENSG00000205913	SRRM2-AS1	-	SRRM2 antisense RNA 1	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr16-1559	chr16	2835054	2836054	+	14.1	1000	"exon (NM_152891, exon 4 of 6)"	"exon (NM_152891, exon 4 of 6)"	1154	NM_152891	260429	Hs.280658	NM_152891	ENSG00000103355	PRSS33	EOS	"protease, serine 33"	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr16-1563	chr16	3033629	3040724	+	104.3	7095	Intergenic	Intergenic	-1879	NR_033861	283875	Hs.620489	NR_033861		LINC00514	LA16c-380H5.1	long intergenic non-protein coding RNA 514	ncRNA	104.33	14.56	7.165521978	7.81E-41
chr16-1568	chr16	4020247	4021247	+	15.4	1000	"intron (NM_001116, intron 10 of 10)"	MIR3|SINE|MIR	-20302	NR_120311	102724927	Hs.364739	NR_120311	ENSG00000262185	LOC102724927	-	uncharacterized LOC102724927	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr16-1569	chr16	4044701	4045701	+	14.1	1000	"intron (NM_001116, intron 3 of 10)"	AluJb|SINE|Alu	-44756	NR_120311	102724927	Hs.364739	NR_120311	ENSG00000262185	LOC102724927	-	uncharacterized LOC102724927	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr16-1570	chr16	4161120	4162120	+	14.1	1000	"intron (NM_001116, intron 2 of 10)"	"intron (NM_001116, intron 2 of 10)"	4566	NM_001116	115	Hs.391860	NM_001116	ENSG00000162104	ADCY9	AC9|ACIX	adenylate cyclase 9	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr16-1571	chr16	4197845	4198845	+	14.7	1000	Intergenic	L1ME2z|LINE|L1	-32159	NM_001116	115	Hs.391860	NM_001116	ENSG00000162104	ADCY9	AC9|ACIX	adenylate cyclase 9	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr16-1573	chr16	4218812	4219812	+	15.4	1000	Intergenic	MLT1E2|LTR|ERVL-MaLR	-53126	NM_001116	115	Hs.391860	NM_001116	ENSG00000162104	ADCY9	AC9|ACIX	adenylate cyclase 9	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr16-1574	chr16	4251877	4255371	+	48.6	3494	"intron (NM_001323667, intron 3 of 6)"	FRAM|SINE|Alu	38457	NM_001098814	6345	Hs.10041	NM_001098814	ENSG00000185739	SRL	-	sarcalumenin	protein-coding	48.65	9.71	5.010298661	3.28E-15
chr16-1577	chr16	4270350	4272842	+	46.7	2492	"intron (NM_001323667, intron 1 of 6)"	"intron (NM_001323667, intron 1 of 6)"	20485	NM_001098814	6345	Hs.10041	NM_001098814	ENSG00000185739	SRL	-	sarcalumenin	protein-coding	46.73	8.25	5.664242424	7.02E-16
chr16-1579	chr16	4593663	4594663	+	15.4	1000	Intergenic	Intergenic	-5347	NM_001199056	29965	Hs.654653	NM_013399	ENSG00000089486	CDIP1	C16orf5|CDIP|I1|LITAFL	cell death inducing p53 target 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr16-1580	chr16	4645632	4646632	+	14.1	1000	"intron (NM_001145011, intron 14 of 15)"	MLT1D|LTR|ERVL-MaLR	18795	NM_001330467	124402	Hs.513313	NM_145253	ENSG00000153443	UBALD1	FAM100A|PP11303	UBA like domain containing 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr16-1581	chr16	4994145	4995588	+	19.8	1443	Intergenic	Intergenic	-7730	NM_002705	5493	Hs.192233	NM_002705	ENSG00000118898	PPL	-	periplakin	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr16-1586	chr16	5442980	5443980	+	16	1000	Intergenic	Intergenic	222771	NR_110902	101926950	Hs.613285	NR_110902	ENSG00000260338	LINC01570	-	long intergenic non-protein coding RNA 1570	ncRNA	16	3.4	4.705882353	2.25E-05
chr16-1588	chr16	6116850	6117850	+	14.1	1000	"intron (NM_018723, intron 1 of 15)"	"intron (NM_018723, intron 1 of 15)"	47646	NM_001308117	54715	Hs.459842	NM_018723	ENSG00000078328	RBFOX1	2BP1|A2BP1|FOX-1|FOX1|HRNBP1	"RNA binding protein, fox-1 homolog 1"	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr16-1589	chr16	6219172	6220172	+	14.7	1000	"intron (NM_018723, intron 1 of 15)"	MER57A1|LTR|ERV1	149968	NM_001308117	54715	Hs.459842	NM_018723	ENSG00000078328	RBFOX1	2BP1|A2BP1|FOX-1|FOX1|HRNBP1	"RNA binding protein, fox-1 homolog 1"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr16-159	chr16	50292959	50295055	+	44.8	2096	Intergenic	Intergenic	-6444	NM_001286057	113	Hs.513578	NM_001114	ENSG00000121281	ADCY7	AC7	adenylate cyclase 7	protein-coding	44.81	3.88	11.54896907	3.74E-25
chr16-1592	chr16	7603047	7604047	+	14.7	1000	"intron (NM_145892, intron 2 of 12)"	"intron (NM_145892, intron 2 of 12)"	220796	NM_145893	54715	Hs.459842	NM_018723	ENSG00000078328	RBFOX1	2BP1|A2BP1|FOX-1|FOX1|HRNBP1	"RNA binding protein, fox-1 homolog 1"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr16-1593	chr16	7692858	7693858	+	14.1	1000	"intron (NM_145892, intron 8 of 12)"	"intron (NM_145892, intron 8 of 12)"	310607	NM_145893	54715	Hs.459842	NM_018723	ENSG00000078328	RBFOX1	2BP1|A2BP1|FOX-1|FOX1|HRNBP1	"RNA binding protein, fox-1 homolog 1"	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr16-1596	chr16	8483449	8484449	+	15.4	1000	Intergenic	Intergenic	103879	NM_001290098	283953	Hs.150849	NM_001146336	ENSG00000232258	TMEM114	-	transmembrane protein 114	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr16-1597	chr16	8495325	8496325	+	14.7	1000	Intergenic	L1MEc|LINE|L1	92003	NM_001290098	283953	Hs.150849	NM_001146336	ENSG00000232258	TMEM114	-	transmembrane protein 114	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr16-1598	chr16	8556203	8557203	+	14.7	1000	Intergenic	L2a|LINE|L2	31125	NM_001290098	283953	Hs.150849	NM_001146336	ENSG00000232258	TMEM114	-	transmembrane protein 114	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr16-1599	chr16	8597908	8598908	+	14.7	1000	"intron (NR_110736, intron 1 of 1)"	"intron (NR_110736, intron 1 of 1)"	3801	NR_110736	283953	Hs.150849	NM_001146336	ENSG00000232258	TMEM114	-	transmembrane protein 114	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr16-160	chr16	56560060	56561335	+	22.4	1275	Intergenic	LTR33|LTR|ERVL	-6689	NM_031885	583	Hs.333738	NM_031885	ENSG00000125124	BBS2	BBS|RP74	Bardet-Biedl syndrome 2	protein-coding	22.4	0	23.07463312	1.33E-22
chr16-1600	chr16	9352996	9353996	+	15.4	1000	Intergenic	Intergenic	-95949	NR_135195	101927009	Hs.537273	NR_135195	ENSG00000261617	LOC101927009	-	uncharacterized LOC101927009	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr16-1605	chr16	10065959	10066959	+	14.7	1000	"intron (NM_000833, intron 3 of 13)"	L1MEf|LINE|L1	209465	NM_001134408	2903	Hs.411472	NM_000833	ENSG00000183454	GRIN2A	EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A	glutamate ionotropic receptor NMDA type subunit 2A	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr16-1609	chr16	10647496	10648496	+	16.6	1000	"intron (NM_001424, intron 1 of 4)"	AluSx|SINE|Alu	26577	NM_001424	2013	Hs.531561	NM_001424	ENSG00000213853	EMP2	XMP	epithelial membrane protein 2	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr16-1611	chr16	10770087	10771699	+	21.8	1612	"intron (NM_144674, intron 4 of 6)"	AluJb|SINE|Alu	17909	NM_144674	146279	Hs.143519	NM_144674	ENSG00000153060	TEKT5	CT149	tektin 5	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr16-1613	chr16	10782017	10783017	+	13.4	1000	"intron (NM_144674, intron 3 of 6)"	"intron (NM_144674, intron 3 of 6)"	6285	NM_144674	146279	Hs.143519	NM_144674	ENSG00000153060	TEKT5	CT149	tektin 5	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr16-1614	chr16	10885854	10886854	+	15.4	1000	"intron (NM_001318873, intron 2 of 7)"	MER5A1|DNA|hAT-Charlie	26297	NR_134903	780776	Hs.371576	NM_001079512	ENSG00000166676	TVP23A	FAM18A|YDR084C	trans-golgi network vesicle protein 23 homolog A	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr16-1617	chr16	10993004	10994004	+	15.4	1000	"intron (NM_000246, intron 5 of 19)"	L2a|LINE|L2	22449	NM_001286403	4261	Hs.592051	NM_000246	ENSG00000179583	CIITA	C2TA|CIITAIV|MHC2TA|NLRA	class II major histocompatibility complex transactivator	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr16-1619	chr16	11680584	11681584	+	14.1	1000	promoter-TSS (NM_001136473)	promoter-TSS (NM_001136473)	238	NR_024320	9516	Hs.459940	NM_004862	ENSG00000189067	LITAF	PIG7|SIMPLE|TP53I7	lipopolysaccharide induced TNF factor	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr16-1620	chr16	11693936	11694936	+	14.7	1000	Intergenic	LTR27|LTR|ERV1	-13114	NR_024320	9516	Hs.459940	NM_004862	ENSG00000189067	LITAF	PIG7|SIMPLE|TP53I7	lipopolysaccharide induced TNF factor	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr16-1621	chr16	11734298	11735298	+	15.4	1000	Intergenic	AluJb|SINE|Alu	-27491	NM_003498	8303	Hs.618526	NM_003498	ENSG00000184602	SNN	-	stannin	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr16-1622	chr16	12046809	12047809	+	14.7	1000	Intergenic	AluSc8|SINE|Alu	-11655	NM_001192	608	Hs.2556	NM_001192	ENSG00000048462	TNFRSF17	BCM|BCMA|CD269|TNFRSF13A	TNF receptor superfamily member 17	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr16-1626	chr16	13901017	13902297	+	19.2	1280	Intergenic	Intergenic	-112357	NM_005236	2072	Hs.567265	NM_005236	ENSG00000175595	ERCC4	ERCC11|FANCQ|RAD1|XFEPS|XPF	"ERCC excision repair 4, endonuclease catalytic subunit"	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr16-1629	chr16	17024333	17025333	+	14.7	1000	Intergenic	Intergenic	-203528	NR_135179	102723692	Hs.737758	NR_135179	ENSG00000261448	LOC102723692	-	uncharacterized LOC102723692	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr16-1631	chr16	17572472	17573472	+	14.1	1000	Intergenic	Intergenic	-8234	NM_022166	64131	Hs.22907	NM_022166	ENSG00000103489	XYLT1	DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I	xylosyltransferase 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr16-1636	chr16	17873479	17874479	+	15.4	1000	Intergenic	Intergenic	-309241	NM_022166	64131	Hs.22907	NM_022166	ENSG00000103489	XYLT1	DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I	xylosyltransferase 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr16-1641	chr16	19297024	19298024	+	14.7	1000	"intron (NM_001256720, intron 1 of 4)"	MIRb|SINE|MIR	419	NM_001256720	728276	Hs.632180	NM_001256720	ENSG00000261210	CLEC19A	-	C-type lectin domain family 19 member A	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr16-1642	chr16	20126316	20127316	+	14.1	1000	Intergenic	MLT1F2|LTR|ERVL-MaLR	-41716	NM_001318483	124274	Hs.446875	NM_001002911	ENSG00000180269	GPR139	GPRg1|PGR3	G protein-coupled receptor 139	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr16-1646	chr16	21698365	21699365	+	14.7	1000	"exon (NM_001161683, exon 3 of 24)"	"exon (NM_001161683, exon 3 of 24)"	3115	NM_001161683	146183	Hs.408336	NM_144672	ENSG00000155719	OTOA	CT108|DFNB22	otoancorin	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr16-1649	chr16	22639348	22641126	+	28.8	1778	Intergenic	MLT1B|LTR|ERVL-MaLR	83218	NR_003676	653786	Hs.564945	NR_003676	ENSG00000257838	LOC653786	-	otoancorin pseudogene	pseudo	28.8	4.37	6.590389016	1.84E-11
chr16-1656	chr16	23218164	23219164	+	14.1	1000	"intron (NM_001039, intron 6 of 12)"	"intron (NM_001039, intron 6 of 12)"	24624	NM_001039	6340	Hs.371727	NM_001039	ENSG00000166828	SCNN1G	BESC3|ENaCg|ENaCgamma|PHA1|SCNEG	sodium channel epithelial 1 gamma subunit	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr16-166	chr16	72893075	72897064	+	61.4	3989	"intron (NM_001164766, intron 3 of 8)"	"intron (NM_001164766, intron 3 of 8)"	187205	NM_006885	463	Hs.598297	NM_006885	ENSG00000140836	ZFHX3	ATBF1|ATBT|ZNF927	zinc finger homeobox 3	protein-coding	61.45	7.28	8.440934066	5.31E-28
chr16-1660	chr16	24294700	24295700	+	14.1	1000	"intron (NM_006539, intron 1 of 3)"	L1M6|LINE|L1	28326	NM_006539	10368	Hs.7235	NM_006539	ENSG00000006116	CACNG3	-	calcium voltage-gated channel auxiliary subunit gamma 3	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr16-1662	chr16	24629306	24630306	+	15.4	1000	Intergenic	MIR|SINE|MIR	52577	NR_122072	400511	Hs.592028	NR_122072	ENSG00000224310	LINC01567	-	long intergenic non-protein coding RNA 1567	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr16-1666	chr16	26332318	26333318	+	14.7	1000	Intergenic	AluSz|SINE|Alu	296260	NR_036146	100422923		NR_036146	ENSG00000265005	MIR548W	-	microRNA 548w	ncRNA	14.72	0.49	30.04081633	3.99E-13
chr16-1673	chr16	27106323	27107323	+	14.1	1000	Intergenic	L1MDa|LINE|L1	28604	NM_001145545	162083	Hs.120831	NM_182831	ENSG00000234186	C16orf82	TNT	chromosome 16 open reading frame 82	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr16-1676	chr16	27805393	27806393	+	14.1	1000	"intron (NM_001109763, intron 6 of 6)"	AluY|SINE|Alu	93585	NM_144675	146395	Hs.91910	NM_144675	ENSG00000169181	GSG1L	PRO19651	GSG1 like	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr16-1679	chr16	31341351	31342351	+	15.4	1000	"exon (NM_000632, exon 28 of 30)"	"exon (NM_000632, exon 28 of 30)"	-24604	NM_001286375	3687	Hs.248472	NM_000887	ENSG00000140678	ITGAX	CD11C|SLEB6	integrin subunit alpha X	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr16-1689	chr16	47986642	47989968	+	49.3	3326	Intergenic	Intergenic	-67264	NR_110649	100507534	Hs.407601	NR_110649	ENSG00000261325	LOC100507534	-	uncharacterized LOC100507534	ncRNA	49.29	9.71	5.076210093	3.28E-15
chr16-1691	chr16	48112229	48113229	+	14.7	1000	Intergenic	L1PA17|LINE|L1	67952	NM_033226	94160	Hs.410111	NM_033226	ENSG00000140798	ABCC12	MRP9	ATP binding cassette subfamily C member 12	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr16-1693	chr16	48486784	48487784	+	14.1	1000	"intron (NR_039970, intron 2 of 4)"	"intron (NR_039970, intron 2 of 4)"	-68055	NM_003031	6477	Hs.706828	NM_003031	ENSG00000196470	SIAH1	SIAH1A	siah E3 ubiquitin protein ligase 1	protein-coding	14.08	0	14.5040551	3.99E-13
chr16-1694	chr16	49005796	49006796	+	14.1	1000	Intergenic	Intergenic	309446	NM_004352	869	Hs.458423	NM_004352	ENSG00000102924	CBLN1	-	cerebellin 1 precursor	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr16-1699	chr16	49424072	49425072	+	14.7	1000	"intron (NM_144602, intron 3 of 4)"	L1MEc|LINE|L1	16853	NM_144602	123970	Hs.125875	NM_144602	ENSG00000166152	C16orf78	-	chromosome 16 open reading frame 78	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr16-1701	chr16	49449150	49450150	+	14.7	1000	Intergenic	L2b|LINE|L2	41931	NM_144602	123970	Hs.125875	NM_144602	ENSG00000166152	C16orf78	-	chromosome 16 open reading frame 78	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr16-1702	chr16	49451844	49453839	+	30.7	1995	Intergenic	Intergenic	45122	NM_144602	123970	Hs.125875	NM_144602	ENSG00000166152	C16orf78	-	chromosome 16 open reading frame 78	protein-coding	30.72	4.85	6.334020619	3.34E-12
chr16-1706	chr16	49732610	49733610	+	14.1	1000	"intron (NM_001271620, intron 3 of 7)"	"intron (NM_001271620, intron 3 of 7)"	-34968	NM_001330533	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr16-1712	chr16	49900360	49901360	+	15.4	1000	Intergenic	Intergenic	-9030	NM_001271620	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr16-1716	chr16	50280355	50281355	+	14.1	1000	Intergenic	Intergenic	-19596	NM_001286057	113	Hs.513578	NM_001114	ENSG00000121281	ADCY7	AC7	adenylate cyclase 7	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr16-1718	chr16	50467446	50469347	+	29.4	1901	Intergenic	MER41A|LTR|ERV1	-65551	NM_001173984	29117	Hs.437894	NM_013263	ENSG00000166164	BRD7	BP75|CELTIX1|NAG4	bromodomain containing 7	protein-coding	29.44	3.4	8.658823529	1.72E-14
chr16-1726	chr16	50668628	50669628	+	15.4	1000	"3' UTR (NM_033119, exon 10 of 10)"	"3' UTR (NM_033119, exon 10 of 10)"	-33638	NR_110908	101927272	Hs.460777	NR_110908	ENSG00000260249	LOC101927272	-	uncharacterized LOC101927272	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr16-1727	chr16	50686885	50687885	+	15.4	1000	Intergenic	Intergenic	-15381	NR_110908	101927272	Hs.460777	NR_110908	ENSG00000260249	LOC101927272	-	uncharacterized LOC101927272	ncRNA	15.36	0	15.82260557	1.26E-14
chr16-1729	chr16	50730174	50731174	+	15.4	1000	promoter-TSS (NM_022162)	promoter-TSS (NM_022162)	-376	NM_022162	64127	Hs.592072	NM_022162	ENSG00000167207	NOD2	ACUG|BLAU|CARD15|CD|CLR16.3|IBD1|NLRC2|NOD2B|PSORAS1	nucleotide binding oligomerization domain containing 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr16-1732	chr16	51106615	51107615	+	15.4	1000	Intergenic	Intergenic	55446	NR_110913	101927334	Hs.555184	NR_110913	ENSG00000261637	LINC02127	-	long intergenic non-protein coding RNA 2127	ncRNA	15.36	0	15.82260557	1.26E-14
chr16-1734	chr16	51501019	51502019	+	14.1	1000	Intergenic	Intergenic	-294911	NR_110916	101927364	Hs.133120	NR_110916	ENSG00000260057	LINC01571	-	long intergenic non-protein coding RNA 1571	ncRNA	14.08	0.49	28.73469388	3.99E-13
chr16-1736	chr16	52916864	52917864	+	14.7	1000	Intergenic	MLT2F|LTR|ERVL	169421	NR_136518	105371267		NR_136518	ENSG00000277639	LOC105371267	PR-lncRNA-1	p53-regulated lncRNA 1	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr16-1738	chr16	53462145	53463145	+	14.7	1000	Intergenic	L2a|LINE|L2	-5687	NM_001323609	5934	Hs.513609	NM_005611	ENSG00000103479	RBL2	P130|Rb2	RB transcriptional corepressor like 2	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr16-1739	chr16	53565728	53566728	+	14.7	1000	Intergenic	LTR81A|LTR|Gypsy	-29012	NM_001012398	64400	Hs.380897	NM_022476	ENSG00000166971	AKTIP	FT1|FTS	AKT interacting protein	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr16-1740	chr16	55018384	55019384	+	14.7	1000	Intergenic	Intergenic	53773	NM_005853	10265	Hs.435730	NM_005853	ENSG00000176842	IRX5	HMMS|IRX-2a|IRXB2	iroquois homeobox 5	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr16-1741	chr16	55081562	55082873	+	17.9	1311	Intergenic	MER5A|DNA|hAT-Charlie	117106	NM_005853	10265	Hs.435730	NM_005853	ENSG00000176842	IRX5	HMMS|IRX-2a|IRXB2	iroquois homeobox 5	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr16-1742	chr16	55221918	55222918	+	13.4	1000	Intergenic	MamGypLTR1a|LTR|Gypsy	-136053	NM_024335	79190	Hs.369907	NM_024335	ENSG00000159387	IRX6	IRX-3|IRX7|IRXB3	iroquois homeobox 6	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr16-1744	chr16	55503120	55504120	+	14.7	1000	Intergenic	L2b|LINE|L2	-9122	NM_001302508	4313	Hs.513617	NM_004530	ENSG00000087245	MMP2	CLG4|CLG4A|MMP-2|MMP-II|MONA|TBE-1	matrix metallopeptidase 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr16-1745	chr16	56079222	56080222	+	13.4	1000	Intergenic	Intergenic	-89779	NM_001190158	221223	Hs.350800	NM_145024	ENSG00000159398	CES5A	CAUXIN|CES4C1|CES5|CES7|HEL126	carboxylesterase 5A	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr16-1749	chr16	56616823	56618091	+	17.3	1268	Intergenic	MER83|LTR|ERV1	-5810	NM_005954	4504	Hs.73133	NM_005954	ENSG00000087250	MT3	GIF|GIFB|GRIF|ZnMT3	metallothionein 3	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr16-175	chr16	85955726	85957244	+	28.8	1518	TTS (NM_002163)	TTS (NM_002163)	4532	NR_106832	102466732		NR_106832	ENSG00000274134	MIR6774	hsa-mir-6774	microRNA 6774	ncRNA	28.8	5.82	4.948453608	3.50E-09
chr16-177	chr16	87615183	87616743	+	29.4	1560	Intergenic	Intergenic	-19478	NR_073379	57338	Hs.592068	NM_020655	ENSG00000154118	JPH3	CAGL237|HDL2|JP-3|JP3|TNRC22	junctophilin 3	protein-coding	29.44	4.85	6.070103093	2.13E-11
chr16-1770	chr16	57883239	57884239	+	13.4	1000	Intergenic	AluSq|SINE|Alu	39190	NM_001278081	388282	Hs.434720	NM_001278081		LOC388282	-	uncharacterized LOC388282	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr16-1771	chr16	57902912	57903912	+	15.4	1000	Intergenic	Intergenic	58863	NM_001278081	388282	Hs.434720	NM_001278081		LOC388282	-	uncharacterized LOC388282	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr16-1772	chr16	57909752	57910752	+	15.4	1000	Intergenic	Intergenic	65703	NM_001278081	388282	Hs.434720	NM_001278081		LOC388282	-	uncharacterized LOC388282	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr16-1776	chr16	58251660	58252963	+	20.5	1303	Intergenic	HAL1|LINE|L1	-20529	NM_001896	1459	Hs.82201	NM_001896	ENSG00000070770	CSNK2A2	CK2A2|CK2alpha'|CSNK2A1	casein kinase 2 alpha 2	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr16-1777	chr16	58375246	58376891	+	25.6	1645	Intergenic	L1M5|LINE|L1	-47117	NM_001305173	221191	Hs.411239	NM_001080492	ENSG00000103023	PRSS54	CT67|KLKBL4	"protease, serine 54"	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr16-1778	chr16	58804456	58805456	+	15.4	1000	Intergenic	MIR|SINE|MIR	-36695	NM_002080	2806	Hs.599470	NM_002080	ENSG00000125166	GOT2	KAT4|KATIV|KYAT4|mitAAT	glutamic-oxaloacetic transaminase 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr16-1779	chr16	58894805	58895805	+	15.4	1000	Intergenic	Intergenic	-127044	NM_002080	2806	Hs.599470	NM_002080	ENSG00000125166	GOT2	KAT4|KATIV|KYAT4|mitAAT	glutamic-oxaloacetic transaminase 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr16-1780	chr16	65779307	65780307	+	15.4	1000	Intergenic	Intergenic	-169604	NR_027755	283867	Hs.444774	NM_001101346	ENSG00000261742	LINC00922	-	long intergenic non-protein coding RNA 922	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr16-1782	chr16	66143119	66144119	+	14.7	1000	Intergenic	GA-rich|Low_complexity|Low_complexity	-256891	NM_001795	1003	Hs.76206	NM_001795	ENSG00000179776	CDH5	7B4|CD144	cadherin 5	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr16-1786	chr16	66353864	66354864	+	14.7	1000	Intergenic	Intergenic	-46146	NM_001795	1003	Hs.76206	NM_001795	ENSG00000179776	CDH5	7B4|CD144	cadherin 5	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr16-179	chr16	1963715	1965825	+	36.5	2110	"intron (NM_001009606, intron 1 of 1)"	"intron (NM_001009606, intron 1 of 1)"	3554	NM_001009606	64711	Hs.670144	NM_001009606	ENSG00000162040	HS3ST6	3-OST-6|HS3ST5	heparan sulfate-glucosamine 3-sulfotransferase 6	protein-coding	36.48	6.8	5.364705882	3.95E-12
chr16-1790	chr16	66467278	66468278	+	14.1	1000	"intron (NM_001197225, intron 1 of 4)"	"intron (NM_001197225, intron 1 of 4)"	6578	NM_001136106	146227	Hs.97805	NM_001136106	ENSG00000166546	BEAN1	BEAN|SCA31	"brain expressed, associated with NEDD4, 1"	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr16-1791	chr16	66484840	66485840	+	15.4	1000	"intron (NM_001178020, intron 2 of 4)"	L1ME3A|LINE|L1	24140	NM_001136106	146227	Hs.97805	NM_001136106	ENSG00000166546	BEAN1	BEAN|SCA31	"brain expressed, associated with NEDD4, 1"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr16-1793	chr16	67032603	67033862	+	17.3	1259	"intron (NM_173815, intron 2 of 11)"	"intron (NM_173815, intron 2 of 11)"	-1184	NM_001190202	283848	Hs.346947	NM_173815	ENSG00000172824	CES4A	CES6|CES8	carboxylesterase 4A	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr16-1798	chr16	67220405	67223718	+	42.9	3313	"intron (NM_178516, intron 4 of 13)"	AluSz|SINE|Alu	2046	NM_178516	283849	Hs.647356	NM_178516	ENSG00000179044	EXOC3L1	EXOC3L	exocyst complex component 3 like 1	protein-coding	42.89	3.4	12.61470588	8.57E-25
chr16-1805	chr16	67561656	67564660	+	51.8	3004	promoter-TSS (NR_104656)	promoter-TSS (NR_104656)	-382	NM_001193523	79567	Hs.152717	NM_024519	ENSG00000039523	FAM65A	-	family with sequence similarity 65 member A	protein-coding	51.85	7.77	6.673101673	6.93E-20
chr16-1806	chr16	68003499	68004499	+	14.1	1000	Intergenic	AluSq2|SINE|Alu	-1402	NM_001145961	6560	Hs.10094	NM_005072	ENSG00000124067	SLC12A4	CTC-479C5.17|KCC1|hKCC1	solute carrier family 12 member 4	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr16-1811	chr16	68746056	68747056	+	14.7	1000	Intergenic	Intergenic	-24637	NM_001317186	999	Hs.461086	NM_004360	ENSG00000039068	CDH1	Arc-1|CD324|CDHE|ECAD|LCAM|UVO	cadherin 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr16-1816	chr16	73005920	73006920	+	14.7	1000	"intron (NM_006885, intron 1 of 9)"	"intron (NM_006885, intron 1 of 9)"	75854	NM_006885	463	Hs.598297	NM_006885	ENSG00000140836	ZFHX3	ATBF1|ATBT|ZNF927	zinc finger homeobox 3	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr16-1817	chr16	73084512	73086102	+	25	1590	"intron (NM_001164766, intron 1 of 8)"	"intron (NM_001164766, intron 1 of 8)"	-3033	NM_006885	463	Hs.598297	NM_006885	ENSG00000140836	ZFHX3	ATBF1|ATBT|ZNF927	zinc finger homeobox 3	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr16-1819	chr16	73302106	73303106	+	15.4	1000	Intergenic	Intergenic	-118098	NR_038234	100506172	Hs.434230	NR_038234	ENSG00000258779	LINC01568	-	long intergenic non-protein coding RNA 1568	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr16-1822	chr16	74066275	74067275	+	14.1	1000	Intergenic	Intergenic	182645	NR_104657	101928035	Hs.39557	NR_104657	ENSG00000261404	LOC101928035	-	uncharacterized LOC101928035	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr16-1824	chr16	74280212	74281212	+	14.7	1000	Intergenic	MLT2B4|LTR|ERVL	-31292	NR_104657	101928035	Hs.39557	NR_104657	ENSG00000261404	LOC101928035	-	uncharacterized LOC101928035	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr16-1825	chr16	74300573	74301573	+	14.7	1000	Intergenic	Intergenic	-29600	NM_002811	5713	Hs.440604	NM_002811	ENSG00000103035	PSMD7	MOV34|P40|Rpn8|S12	"proteasome 26S subunit, non-ATPase 7"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr16-1830	chr16	75258025	75259025	+	15.4	1000	"intron (NM_001906, intron 6 of 6)"	L2b|LINE|L2	-1756	NR_109777	100506281	Hs.710310	NR_109777		LOC100506281	-	uncharacterized LOC100506281	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr16-1831	chr16	75289409	75290409	+	14.7	1000	"intron (NM_001170720, intron 1 of 7)"	"intron (NM_001170720, intron 1 of 7)"	-4383	NM_014567	9564	Hs.479747	NM_014567	ENSG00000050820	BCAR1	CAS|CAS1|CASS1|CRKAS|P130Cas	"BCAR1, Cas family scaffolding protein"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr16-1832	chr16	77194920	77195920	+	14.1	1000	Intergenic	Intergenic	-29396	NM_014940	22879	Hs.513743	NM_014940	ENSG00000103111	MON1B	HSRG1|SAND2|SRG1	"MON1 homolog B, secretory trafficking associated"	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr16-1833	chr16	77591783	77592783	+	15.4	1000	Intergenic	AluSz6|SINE|Alu	-123272	NM_199355	170692	Hs.188746	NM_139054	ENSG00000140873	ADAMTS18	ADAMTS21|KNO2|MMCAT	ADAM metallopeptidase with thrombospondin type 1 motif 18	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr16-1838	chr16	79313037	79315368	+	35.2	2331	Intergenic	MER115|DNA|hAT-Tip100	320420	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding	35.2	3.88	9.072164948	5.09E-17
chr16-184	chr16	5531556	5532808	+	23	1252	Intergenic	Intergenic	134069	NR_110902	101926950	Hs.613285	NR_110902	ENSG00000260338	LINC01570	-	long intergenic non-protein coding RNA 1570	ncRNA	23.04	3.88	5.93814433	4.22E-09
chr16-1843	chr16	79613773	79614773	+	14.1	1000	Intergenic	Intergenic	20349	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding	14.08	0.49	28.73469388	3.99E-13
chr16-1850	chr16	79901402	79902402	+	14.1	1000	Intergenic	Intergenic	72756	NR_104661	101928248	Hs.659802	NR_104660	ENSG00000260876	LINC01229	-	long intergenic non-protein coding RNA 1229	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr16-1851	chr16	80339448	80340448	+	14.7	1000	"intron (NR_120307, intron 2 of 5)"	MIRb|SINE|MIR	-234683	NM_001305017	83657	Hs.98849	NM_130897	ENSG00000168589	DYNLRB2	DNCL2B|DNLC2B|ROBLD2	dynein light chain roadblock-type 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr16-1857	chr16	81244711	81245711	+	14.1	1000	"intron (NM_001076780, intron 3 of 17)"	"intron (NM_001076780, intron 3 of 17)"	8764	NM_052892	114780	Hs.413525	NM_052892	ENSG00000166473	PKD1L2	PC1L2	polycystin 1 like 2 (gene/pseudogene)	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr16-1859	chr16	81318755	81319755	+	14.1	1000	"intron (NM_017429, intron 9 of 10)"	"intron (NM_017429, intron 9 of 10)"	-29316	NM_022041	8139	Hs.112569	NM_022041	ENSG00000261609	GAN	GAN1|KLHL16	gigaxonin	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr16-186	chr16	27004423	27005686	+	23	1263	Intergenic	MIR3|SINE|MIR	-73165	NM_001145545	162083	Hs.120831	NM_182831	ENSG00000234186	C16orf82	TNT	chromosome 16 open reading frame 82	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr16-1863	chr16	82271873	82272873	+	14.7	1000	Intergenic	L1PB1|LINE|L1	-68544	NM_005792	10200	Hs.344400	NM_005792	ENSG00000135698	MPHOSPH6	MPP|MPP-6|MPP6	M-phase phosphoprotein 6	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr16-1865	chr16	82467912	82468912	+	14.1	1000	Intergenic	Intergenic	-191987	NM_001220490	1012	Hs.654386	NM_001257	ENSG00000140945	CDH13	CDHH|P105	cadherin 13	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr16-1867	chr16	82739764	82740764	+	14.1	1000	"intron (NM_001220488, intron 2 of 14)"	AluSx1|SINE|Alu	17728	NR_107025	102465863		NR_107025	ENSG00000277387	MIR8058	hsa-mir-8058	microRNA 8058	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr16-1870	chr16	83266560	83267560	+	13.4	1000	"intron (NM_001257, intron 5 of 13)"	MLT1D|LTR|ERVL-MaLR	-243157	NR_110937	101928417	Hs.569538	NR_110937	ENSG00000260832	LOC101928417	-	uncharacterized LOC101928417	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr16-1871	chr16	83929334	83930334	+	14.1	1000	Intergenic	L1MB7|LINE|L1	-2896	NM_012213	23417	Hs.644610	NM_012213	ENSG00000103150	MLYCD	MCD	malonyl-CoA decarboxylase	protein-coding	14.08	0.49	28.73469388	3.99E-13
chr16-1873	chr16	84064650	84066229	+	20.5	1579	"intron (NM_001080442, intron 4 of 9)"	"intron (NM_001080442, intron 4 of 9)"	10323	NM_001080442	146167		NM_001080442	ENSG00000166558	SLC38A8	FVH2	solute carrier family 38 member 8	protein-coding	20.48	0.49	41.79591837	5.97E-21
chr16-1875	chr16	84266554	84267554	+	15.4	1000	"intron (NM_172347, intron 2 of 2)"	AluJb|SINE|Alu	6302	NM_172347	93107	Hs.335877	NM_133490	ENSG00000168418	KCNG4	KV6.3|KV6.4	potassium voltage-gated channel modifier subfamily G member 4	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr16-1876	chr16	84269562	84272465	+	37.1	2903	"exon (NM_172347, exon 2 of 3)"	"exon (NM_172347, exon 2 of 3)"	2343	NM_172347	93107	Hs.335877	NM_133490	ENSG00000168418	KCNG4	KV6.3|KV6.4	potassium voltage-gated channel modifier subfamily G member 4	protein-coding	37.12	3.88	9.567010309	5.72E-19
chr16-1882	chr16	84410690	84411690	+	14.7	1000	"intron (NM_014861, intron 1 of 26)"	MLT1B|LTR|ERVL-MaLR	9061	NM_001286527	9914	Hs.6168	NM_014861	ENSG00000064270	ATP2C2	SPCA2	ATPase secretory pathway Ca2+ transporting 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr16-1886	chr16	84520554	84521554	+	14.1	1000	"intron (NM_020947, intron 4 of 7)"	"intron (NM_020947, intron 4 of 7)"	17234	NM_020947	57707	Hs.288274	NM_020947	ENSG00000140950	TLDC1	KIAA1609	TBC/LysM-associated domain containing 1	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr16-189	chr16	48137225	48138475	+	21.1	1250	"intron (NM_033226, intron 20 of 28)"	"intron (NM_033226, intron 20 of 28)"	42831	NM_033226	94160	Hs.410111	NM_033226	ENSG00000140798	ABCC12	MRP9	ATP binding cassette subfamily C member 12	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr16-1890	chr16	84970961	84973871	+	34.6	2910	Intergenic	AluSq2|SINE|Alu	72725	NM_017740	55625	Hs.461610	NM_017740	ENSG00000153786	ZDHHC7	DHHC7|SERZ-B|SERZ1|ZNF370	zinc finger DHHC-type containing 7	protein-coding	34.56	3.88	8.907216495	5.09E-17
chr16-1896	chr16	85144289	85145555	+	17.9	1266	"intron (NM_198491, intron 1 of 7)"	MIR|SINE|MIR	1192	NM_198491	339145	Hs.125713	NM_198491	ENSG00000153789	FAM92B	-	family with sequence similarity 92 member B	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr16-1901	chr16	85266902	85270325	+	39.7	3423	Intergenic	Intergenic	-47951	NR_038859	197196	Hs.679002	NM_153238	ENSG00000179219	LINC00311	NCRNA00311|TMEM148	long intergenic non-protein coding RNA 311	ncRNA	39.69	6.8	5.836764706	2.14E-14
chr16-1902	chr16	85273175	85274175	+	15.4	1000	Intergenic	MIR|SINE|MIR	-42889	NR_038859	197196	Hs.679002	NM_153238	ENSG00000179219	LINC00311	NCRNA00311|TMEM148	long intergenic non-protein coding RNA 311	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr16-191	chr16	50500165	50503278	+	44.8	3113	Intergenic	Intergenic	-80520	NM_033119	85407	Hs.187578	NM_033119	ENSG00000140807	NKD1	Naked1	naked cuticle homolog 1	protein-coding	44.81	8.74	5.127002288	2.02E-14
chr16-1910	chr16	85389950	85390950	+	15.4	1000	Intergenic	Intergenic	-50519	NR_049816	100847022		NR_049816	ENSG00000266307	MIR5093	-	microRNA 5093	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr16-1918	chr16	86061932	86062932	+	15.4	1000	Intergenic	AluJr|SINE|Alu	110479	NR_106832	102466732		NR_106832	ENSG00000274134	MIR6774	hsa-mir-6774	microRNA 6774	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr16-192	chr16	56658727	56661074	+	43.5	2347	"intron (NM_175617, intron 1 of 2)"	"intron (NM_175617, intron 1 of 2)"	315	NM_175617	4493	Hs.744893	NM_175617	ENSG00000169715	MT1E	MT-1E|MT-IE|MT1|MTD	metallothionein 1E	protein-coding	43.53	7.28	5.979395604	6.36E-16
chr16-1920	chr16	86094687	86095687	+	14.1	1000	Intergenic	Intergenic	-134600	NR_103859	100506542	Hs.111902	NR_103859	ENSG00000269186	LINC01082	TCONS_00024492	long intergenic non-protein coding RNA 1082	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr16-1922	chr16	86197202	86198756	+	21.8	1554	Intergenic	MIRc|SINE|MIR	-31808	NR_103859	100506542	Hs.111902	NR_103859	ENSG00000269186	LINC01082	TCONS_00024492	long intergenic non-protein coding RNA 1082	ncRNA	21.76	0.97	22.43298969	1.19E-17
chr16-1925	chr16	86231061	86234467	+	56.3	3406	"intron (NR_103859, intron 1 of 1)"	"intron (NR_103859, intron 1 of 1)"	2977	NR_103859	100506542	Hs.111902	NR_103859	ENSG00000269186	LINC01082	TCONS_00024492	long intergenic non-protein coding RNA 1082	ncRNA	56.33	11.65	4.835193133	8.28E-17
chr16-1926	chr16	86264667	86265667	+	14.7	1000	"intron (NR_104139, intron 3 of 5)"	L1ME3A|LINE|L1	35380	NR_103859	100506542	Hs.111902	NR_103859	ENSG00000269186	LINC01082	TCONS_00024492	long intergenic non-protein coding RNA 1082	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr16-1927	chr16	86276139	86277672	+	25.6	1533	"intron (NR_104139, intron 3 of 5)"	"intron (NR_104139, intron 3 of 5)"	42948	NR_104139	101154687	Hs.640512	NR_104139		LINC01081	TCONS00024764|TCONS_00024764	long intergenic non-protein coding RNA 1081	ncRNA	25.6	0	26.37100928	1.06E-27
chr16-1930	chr16	86333165	86334165	+	14.1	1000	Intergenic	Intergenic	13628	NR_038438	146513	Hs.434338	NR_038438	ENSG00000268532	LINC02135	-	long intergenic non-protein coding RNA 2135	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr16-1935	chr16	86473180	86478762	+	82.6	5582	Intergenic	Intergenic	66495	NR_036444	400550	Hs.448825	NR_033925	ENSG00000268388	FENDRR	FOXF1-AS1|TCONS_00024240|lincFOXF1|onco-lncRNA-21	FOXF1 adjacent non-coding developmental regulatory RNA	ncRNA	82.57	11.65	7.087553648	2.44E-32
chr16-1941	chr16	86542528	86544064	+	24.3	1536	promoter-TSS (NR_033925)	promoter-TSS (NR_033925)	-830	NR_033925	400550	Hs.448825	NR_033925	ENSG00000268388	FENDRR	FOXF1-AS1|TCONS_00024240|lincFOXF1|onco-lncRNA-21	FOXF1 adjacent non-coding developmental regulatory RNA	ncRNA	24.32	0.97	25.07216495	2.01E-20
chr16-1943	chr16	86709535	86710789	+	17.9	1254	Intergenic	Intergenic	45403	NR_135181	101928614	Hs.399823	NR_135181	ENSG00000260026	LOC101928614	-	uncharacterized LOC101928614	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr16-1944	chr16	86713593	86716039	+	35.2	2446	Intergenic	Intergenic	40749	NR_135181	101928614	Hs.399823	NR_135181	ENSG00000260026	LOC101928614	-	uncharacterized LOC101928614	ncRNA	35.2	3.88	9.072164948	5.09E-17
chr16-1947	chr16	86940039	86941876	+	26.9	1837	Intergenic	Intergenic	-150433	NR_126008	440390	Hs.513789	NR_126008	ENSG00000232190	LOC440390	-	uncharacterized LOC440390	ncRNA	26.88	4.37	6.151029748	1.19E-10
chr16-1949	chr16	87100253	87107451	+	110.1	7198	Intergenic	Intergenic	12462	NR_126008	440390	Hs.513789	NR_126008	ENSG00000232190	LOC440390	-	uncharacterized LOC440390	ncRNA	110.09	18.93	5.815636556	7.66E-37
chr16-1952	chr16	87146476	87148103	+	23.7	1627	Intergenic	MER41A|LTR|ERV1	55899	NR_126008	440390	Hs.513789	NR_126008	ENSG00000232190	LOC440390	-	uncharacterized LOC440390	ncRNA	23.68	5.82	4.068728522	1.51E-06
chr16-1961	chr16	87637815	87639380	+	23.7	1565	TTS (NM_001271605)	TTS (NM_001271605)	2104	NM_001271605	57338	Hs.592068	NM_020655	ENSG00000154118	JPH3	CAGL237|HDL2|JP-3|JP3|TNRC22	junctophilin 3	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr16-1963	chr16	87680671	87684110	+	49.9	3439	"intron (NM_020655, intron 2 of 4)"	"intron (NM_020655, intron 2 of 4)"	45897	NM_001271605	57338	Hs.592068	NM_020655	ENSG00000154118	JPH3	CAGL237|HDL2|JP-3|JP3|TNRC22	junctophilin 3	protein-coding	49.93	8.25	6.052121212	3.38E-18
chr16-1966	chr16	87700078	87702622	+	37.8	2544	"intron (NM_020655, intron 2 of 4)"	MER58C|DNA|hAT-Charlie	64857	NM_001271605	57338	Hs.592068	NM_020655	ENSG00000154118	JPH3	CAGL237|HDL2|JP-3|JP3|TNRC22	junctophilin 3	protein-coding	37.76	3.88	9.731958763	5.72E-19
chr16-1969	chr16	88228003	88229849	+	29.4	1846	TTS (NR_110944)	TTS (NR_110944)	1039	NR_110944	101928880	Hs.634835	NR_110944	ENSG00000260420	LOC101928880	LA16c-444G7.2	uncharacterized LOC101928880	ncRNA	29.44	2.91	10.11683849	7.13E-16
chr16-1970	chr16	88298596	88301011	+	39.7	2415	Intergenic	Intergenic	71916	NR_110944	101928880	Hs.634835	NR_110944	ENSG00000260420	LOC101928880	LA16c-444G7.2	uncharacterized LOC101928880	ncRNA	39.69	5.82	6.819587629	3.74E-16
chr16-1979	chr16	88485351	88486351	+	14.7	1000	Intergenic	MIR3|SINE|MIR	-8028	NM_001127464	84627	Hs.54925	NM_001127464	ENSG00000225614	ZNF469	BCS|BCS1	zinc finger protein 469	protein-coding	14.72	0	15.16333034	3.99E-13
chr16-199	chr16	67413052	67416454	+	50.6	3402	"intron (NM_018296, intron 12 of 13)"	MER5A1|DNA|hAT-Charlie	12685	NM_015964	51673	Hs.534458	NM_015964	ENSG00000159713	TPPP3	CGI-38|TPPP/p20|p20|p25gamma	tubulin polymerization promoting protein family member 3	protein-coding	50.57	9.22	5.484815618	1.24E-16
chr16-201	chr16	79291806	79293236	+	25.6	1430	Intergenic	Intergenic	342101	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr16-202	chr16	82954800	82956732	+	37.1	1932	"intron (NM_001220490, intron 2 of 12)"	L1M4|LINE|L1	68137	NR_110937	101928417	Hs.569538	NR_110937	ENSG00000260832	LOC101928417	-	uncharacterized LOC101928417	ncRNA	37.12	5.82	6.378006873	1.70E-14
chr16-203	chr16	84327801	84330212	+	46.7	2411	"intron (NM_021197, intron 1 of 6)"	"intron (NM_021197, intron 1 of 6)"	694	NM_001282466	58189	Hs.36688	NM_021197	ENSG00000103175	WFDC1	PS20	WAP four-disulfide core domain 1	protein-coding	46.73	8.74	5.346681922	3.81E-15
chr16-210	chr16	88162013	88163013	+	21.8	1000	Intergenic	Intergenic	-27922	NR_120310	400553	Hs.592071	NR_120310	ENSG00000205037	LOC400553	-	uncharacterized LOC400553	ncRNA	21.76	3.4	6.4	3.73E-09
chr16-215	chr16	3046919	3050435	+	67.8	3516	promoter-TSS (NR_110947)	promoter-TSS (NR_110947)	-279	NR_110949	101929613	Hs.741644	NR_110947		LOC101929613	LA16c-380H5.3	uncharacterized LOC101929613	ncRNA	67.85	11.65	5.824034335	2.12E-23
chr16-216	chr16	3085560	3091625	+	108.2	6065	"non-coding (NR_047572, exon 8 of 8)"	"non-coding (NR_047572, exon 8 of 8)"	-3050	NM_001103175	146439	Hs.513285	NM_001103175	ENSG00000162069	BICDL2	BICDR-2|BICDR2|CCDC64B	BICD family like cargo adaptor 2	protein-coding	108.17	16.5	6.555757576	1.65E-39
chr16-218	chr16	4174733	4176240	+	26.2	1507	Intergenic	Intergenic	-9300	NM_001116	115	Hs.391860	NM_001116	ENSG00000162104	ADCY9	AC9|ACIX	adenylate cyclase 9	protein-coding	26.24	5.82	4.508591065	7.99E-08
chr16-220	chr16	8589367	8590367	+	20.5	1000	"intron (NR_110736, intron 1 of 1)"	AluSx|SINE|Alu	-2039	NM_001290098	283953	Hs.150849	NM_001146336	ENSG00000232258	TMEM114	-	transmembrane protein 114	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr16-222	chr16	10931728	10934649	+	44.8	2921	Intergenic	LTR16C|LTR|ERVL	-20537	NR_134904	780776	Hs.371576	NM_001079512	ENSG00000166676	TVP23A	FAM18A|YDR084C	trans-golgi network vesicle protein 23 homolog A	protein-coding	44.81	3.88	11.54896907	3.74E-25
chr16-223	chr16	13392151	13393461	+	21.8	1310	Intergenic	Intergenic	397329	NM_001145204	729993	Hs.130661	NM_001145204	ENSG00000237515	SHISA9	CKAMP44	shisa family member 9	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr16-227	chr16	49781134	49785083	+	56.3	3949	"intron (NM_001271620, intron 2 of 7)"	"intron (NM_001271620, intron 2 of 7)"	73541	NM_015069	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	56.33	12.13	4.643858203	3.45E-16
chr16-230	chr16	53539140	53540561	+	26.2	1421	Intergenic	MSTB1|LTR|ERVL-MaLR	-2634	NM_001012398	64400	Hs.380897	NM_022476	ENSG00000166971	AKTIP	FT1|FTS	AKT interacting protein	protein-coding	26.24	3.88	6.762886598	1.00E-10
chr16-236	chr16	58059830	58061259	+	28.2	1429	"intron (NM_002428, intron 1 of 9)"	CpG	1074	NM_002428	4324	Hs.80343	NM_002428	ENSG00000102996	MMP15	MMP-15|MT2-MMP|MT2MMP|MTMMP2|SMCP-2	matrix metallopeptidase 15	protein-coding	28.16	1.94	14.51546392	1.99E-18
chr16-242	chr16	79638945	79640467	+	26.2	1522	Intergenic	Intergenic	-5084	NM_001031804	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding	26.24	4.37	6.004576659	7.40E-10
chr16-256	chr16	88461979	88464407	+	47.4	2428	Intergenic	Intergenic	-30686	NM_001127464	84627	Hs.54925	NM_001127464	ENSG00000225614	ZNF469	BCS|BCS1	zinc finger protein 469	protein-coding	47.37	4.85	9.767010309	4.75E-24
chr16-259	chr16	89111055	89112055	+	20.5	1000	Intergenic	Intergenic	-48662	NM_001243279	197322	Hs.461727	NM_174917	ENSG00000176715	ACSF3	-	acyl-CoA synthetase family member 3	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr16-263	chr16	2245273	2250807	+	82.6	5534	Intergenic	MIRb|SINE|MIR	-1575	NM_020764	57524	Hs.643537	NM_020764	ENSG00000167971	CASKIN1	ANKS5A	CASK interacting protein 1	protein-coding	82.57	12.62	6.542789223	1.95E-30
chr16-269	chr16	3082369	3083369	+	20.5	1000	"intron (NR_047572, intron 2 of 7)"	L2b|LINE|L2	387	NR_047572	100128770	Hs.666223	NR_047572	ENSG00000205890	LOC100128770	-	uncharacterized LOC100128770	ncRNA	20.48	4.37	4.686498856	6.64E-07
chr16-271	chr16	3093928	3094928	+	19.8	1000	Intergenic	L1M5|LINE|L1	-2254	NM_022468	64386	Hs.654979	NM_004142	ENSG00000008516	MMP25	MMP-25|MMP20|MMP20A|MMPL1|MT-MMP 6|MT-MMP6|MT6-MMP|MT6MMP|MTMMP6	matrix metallopeptidase 25	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr16-277	chr16	28054079	28055509	+	25	1430	"intron (NM_001109763, intron 1 of 6)"	L1M6|LINE|L1	20036	NM_001323901	146395	Hs.91910	NM_144675	ENSG00000169181	GSG1L	PRO19651	GSG1 like	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr16-281	chr16	49971736	49972736	+	20.5	1000	Intergenic	Intergenic	-80406	NM_001271620	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr16-283	chr16	55121685	55122960	+	21.1	1275	Intergenic	Intergenic	157211	NM_005853	10265	Hs.435730	NM_005853	ENSG00000176842	IRX5	HMMS|IRX-2a|IRXB2	iroquois homeobox 5	protein-coding	21.12	0.97	21.77319588	2.68E-16
chr16-285	chr16	56676633	56677633	+	19.8	1000	promoter-TSS (NR_027781)	promoter-TSS (NR_027781)	-466	NR_027781	326343	Hs.679600	NM_175620		MT1DP	MTM	"metallothionein 1D, pseudogene"	pseudo	19.84	1.94	10.22680412	9.57E-11
chr16-286	chr16	56701181	56705887	+	79.4	4706	promoter-TSS (NM_005951)	promoter-TSS (NM_005951)	-192	NM_005951	4496	Hs.438462	NM_005951	ENSG00000205358	MT1H	MT-0|MT-1H|MT-IH|MT1	metallothionein 1H	protein-coding	79.37	15.05	5.273754153	6.89E-25
chr16-294	chr16	79623742	79629667	+	78.7	5925	Intergenic	Intergenic	7918	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding	78.73	15.53	5.06954282	1.74E-23
chr16-297	chr16	84914349	84917235	+	48	2886	"intron (NM_031476, intron 13 of 14)"	L1M2|LINE|L1	62205	NM_031476	83716	Hs.513779	NM_031476	ENSG00000103196	CRISPLD2	CRISP11|LCRISP2|LGL1	cysteine rich secretory protein LCCL domain containing 2	protein-coding	48.01	7.77	6.178893179	1.86E-17
chr16-299	chr16	85225634	85229498	+	58.2	3864	Intergenic	L1MD2|LINE|L1	56810	NR_033984	400548	Hs.592054	NR_033984	ENSG00000278214	LINC02139	-	long intergenic non-protein coding RNA 2139	ncRNA	58.25	12.13	4.802143446	7.23E-17
chr16-304	chr16	86256178	86257178	+	19.8	1000	Intergenic	Intergenic	26891	NR_103859	100506542	Hs.111902	NR_103859	ENSG00000269186	LINC01082	TCONS_00024492	long intergenic non-protein coding RNA 1082	ncRNA	19.84	4.85	4.090721649	1.08E-05
chr16-308	chr16	87467365	87468365	+	19.8	1000	"intron (NM_015144, intron 2 of 12)"	"intron (NM_015144, intron 2 of 12)"	42064	NM_022818	81631	Hs.356061	NM_022818	ENSG00000140941	MAP1LC3B	ATG8F|LC3B|MAP1A/1BLC3|MAP1LC3B-a	microtubule associated protein 1 light chain 3 beta	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr16-310	chr16	88454132	88456359	+	33.3	2227	Intergenic	Intergenic	-38634	NM_001127464	84627	Hs.54925	NM_001127464	ENSG00000225614	ZNF469	BCS|BCS1	zinc finger protein 469	protein-coding	33.28	4.85	6.86185567	7.28E-14
chr16-320	chr16	4239692	4241721	+	39	2029	"3' UTR (NM_001098814, exon 6 of 6)"	"3' UTR (NM_001098814, exon 6 of 6)"	51375	NM_001098814	6345	Hs.10041	NM_001098814	ENSG00000185739	SRL	-	sarcalumenin	protein-coding	39.04	8.74	4.466819222	5.52E-11
chr16-325	chr16	9731484	9732734	+	21.8	1250	Intergenic	Intergenic	-182747	NR_126349	104266959	Hs.578888	NR_126349	ENSG00000261075	LINC01195	-	long intergenic non-protein coding RNA 1195	ncRNA	21.76	3.4	6.4	3.73E-09
chr16-326	chr16	10972736	10974966	+	35.2	2230	"intron (NM_000246, intron 1 of 19)"	"intron (NM_000246, intron 1 of 19)"	2796	NM_001286403	4261	Hs.592051	NM_000246	ENSG00000179583	CIITA	C2TA|CIITAIV|MHC2TA|NLRA	class II major histocompatibility complex transactivator	protein-coding	35.2	3.88	9.072164948	5.09E-17
chr16-327	chr16	15950310	15951310	+	17.9	1000	promoter-TSS (NM_001040113)	promoter-TSS (NM_001040113)	77	NM_002474	4629	Hs.460109	NM_002474	ENSG00000133392	MYH11	AAT4|FAA4|SMHC|SMMHC	myosin heavy chain 11	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr16-328	chr16	21574016	21575529	+	28.2	1513	Intergenic	MLT1A|LTR|ERVL-MaLR	-33770	NM_001288659	51108	Hs.279583	NM_016025	ENSG00000197006	METTL9	CGI-81|DREV|DREV1|PAP1	methyltransferase like 9	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr16-332	chr16	48936658	48937930	+	21.1	1272	Intergenic	Intergenic	-293174	NM_153029	9683	Hs.511839	NM_153029	ENSG00000102921	N4BP1	-	NEDD4 binding protein 1	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr16-336	chr16	50457805	50459273	+	21.8	1468	Intergenic	AluJo|SINE|Alu	-55694	NM_001173984	29117	Hs.437894	NM_013263	ENSG00000166164	BRD7	BP75|CELTIX1|NAG4	bromodomain containing 7	protein-coding	21.76	2.43	8.95473251	2.49E-11
chr16-338	chr16	53076861	53078120	+	22.4	1259	"intron (NR_136518, intron 2 of 2)"	"intron (NR_136518, intron 2 of 2)"	9295	NR_136518	105371267		NR_136518	ENSG00000277639	LOC105371267	PR-lncRNA-1	p53-regulated lncRNA 1	ncRNA	22.4	2.91	7.697594502	3.87E-10
chr16-340	chr16	56665455	56670862	+	98.6	5407	TTS (NM_176870)	TTS (NM_176870)	-1493	NR_036677	4498	Hs.736648	NR_036677	ENSG00000255986	MT1JP	MT1|MT1J|MT1NP|MTB	"metallothionein 1J, pseudogene"	pseudo	98.57	12.62	7.810618067	1.37E-41
chr16-344	chr16	57837099	57838099	+	18.6	1000	promoter-TSS (NM_001318710)	promoter-TSS (NM_001318710)	-663	NM_001318710	3801	Hs.23131	NM_005550	ENSG00000140859	KIFC3	-	kinesin family member C3	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr16-347	chr16	66676988	66677988	+	19.8	1000	"intron (NM_178818, intron 1 of 4)"	Arthur1|DNA|hAT-Tip100	38854	NR_037619	123920	Hs.298198	NM_144601	ENSG00000140931	CMTM3	BNAS2|CKLFSF3	CKLF like MARVEL transmembrane domain containing 3	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr16-357	chr16	68684242	68685845	+	28.8	1603	"intron (NM_001793, intron 2 of 15)"	"intron (NM_001793, intron 2 of 15)"	6304	NM_001317196	1001	Hs.191842	NM_001793	ENSG00000062038	CDH3	CDHP|HJMD|PCAD	cadherin 3	protein-coding	28.8	1.94	14.84536082	1.99E-18
chr16-363	chr16	79302833	79304578	+	31.4	1745	Intergenic	Intergenic	330917	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding	31.36	5.82	5.388316151	1.29E-10
chr16-364	chr16	79605244	79606501	+	19.2	1257	Intergenic	Intergenic	28750	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr16-366	chr16	79927683	79928683	+	17.9	1000	Intergenic	Intergenic	99037	NR_104661	101928248	Hs.659802	NR_104660	ENSG00000260876	LINC01229	-	long intergenic non-protein coding RNA 1229	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr16-370	chr16	84382597	84384053	+	21.8	1456	Intergenic	MLT1D|LTR|ERVL-MaLR	-18804	NM_014861	9914	Hs.6168	NM_014861	ENSG00000064270	ATP2C2	SPCA2	ATPase secretory pathway Ca2+ transporting 2	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr16-371	chr16	84472506	84474085	+	25.6	1579	"intron (NM_001291454, intron 10 of 23)"	"intron (NM_001291454, intron 10 of 23)"	33101	NM_001291454	9914	Hs.6168	NM_014861	ENSG00000064270	ATP2C2	SPCA2	ATPase secretory pathway Ca2+ transporting 2	protein-coding	25.6	3.4	7.529411765	9.95E-12
chr16-373	chr16	84900290	84902479	+	41	2189	"intron (NM_031476, intron 7 of 14)"	"intron (NM_031476, intron 7 of 14)"	47797	NM_031476	83716	Hs.513779	NM_031476	ENSG00000103196	CRISPLD2	CRISP11|LCRISP2|LGL1	cysteine rich secretory protein LCCL domain containing 2	protein-coding	40.97	6.8	6.025	3.54E-15
chr16-375	chr16	85100334	85101334	+	17.9	1000	"exon (NM_001297766, exon 2 of 8)"	"exon (NM_001297766, exon 2 of 8)"	4016	NM_001286565	9764	Hs.301658	NM_014732	ENSG00000135709	KIAA0513	-	KIAA0513	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr16-379	chr16	85985563	85991413	+	86.4	5850	Intergenic	MER5B|DNA|hAT-Charlie	36535	NR_106832	102466732		NR_106832	ENSG00000274134	MIR6774	hsa-mir-6774	microRNA 6774	ncRNA	86.41	18.44	4.686008677	8.13E-24
chr16-386	chr16	86681310	86682643	+	23.7	1333	Intergenic	Intergenic	69861	NM_005250	2300	Hs.533830	NM_005250	ENSG00000176678	FOXL1	FKH6|FKHL11|FREAC7	forkhead box L1	protein-coding	23.68	1.94	12.20618557	6.71E-14
chr16-388	chr16	86842734	86844393	+	35.8	1659	Intergenic	Intergenic	87866	NR_135183	102724344	Hs.585769	NR_135182	ENSG00000261175	LOC102724344	-	uncharacterized LOC102724344	ncRNA	35.84	5.82	6.158075601	1.09E-13
chr16-389	chr16	86851500	86852750	+	23	1250	Intergenic	MER5A1|DNA|hAT-Charlie	96428	NR_135183	102724344	Hs.585769	NR_135182	ENSG00000261175	LOC102724344	-	uncharacterized LOC102724344	ncRNA	23.04	3.88	5.93814433	4.22E-09
chr16-393	chr16	88450680	88452006	+	24.3	1326	Intergenic	L3|LINE|CR1	-42536	NM_001127464	84627	Hs.54925	NM_001127464	ENSG00000225614	ZNF469	BCS|BCS1	zinc finger protein 469	protein-coding	24.32	3.4	7.152941176	7.55E-11
chr16-395	chr16	1333549	1336224	+	35.8	2675	Intergenic	Intergenic	-24268	NM_194261	7329	Hs.302903	NM_003345	ENSG00000103275	UBE2I	C358B7.1|P18|UBC9	ubiquitin conjugating enzyme E2 I	protein-coding	35.84	6.31	5.679873217	7.13E-13
chr16-396	chr16	1945613	1946613	+	17.9	1000	Intergenic	Intergenic	-11881	NR_033914	64735	Hs.662737	NR_033914	ENSG00000281219	LINC00254	C16orf32|NCRNA00254	long intergenic non-protein coding RNA 254	ncRNA	17.92	0	18.4597065	9.96E-18
chr16-400	chr16	2774791	2775791	+	19.2	1000	Intergenic	MLT1E2|LTR|ERVL-MaLR	-4739	NM_031948	83886	Hs.332878	NM_031948	ENSG00000172382	PRSS27	CAPH2|MPN	"protease, serine 27"	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr16-409	chr16	3410469	3412022	+	28.2	1553	Intergenic	AluJo|SINE|Alu	5356	NM_012368	4993	Hs.258574	NM_012368	ENSG00000168158	OR2C1	OLFmf3|OR2C2P	olfactory receptor family 2 subfamily C member 1	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr16-410	chr16	4028013	4029013	+	18.6	1000	"intron (NM_001116, intron 8 of 10)"	"intron (NM_001116, intron 8 of 10)"	-28068	NR_120311	102724927	Hs.364739	NR_120311	ENSG00000262185	LOC102724927	-	uncharacterized LOC102724927	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr16-413	chr16	4364175	4367683	+	61.4	3508	"intron (NM_001318918, intron 1 of 7)"	"intron (NM_001318918, intron 1 of 7)"	1167	NM_001318918	84662	Hs.592087	NM_032575	ENSG00000126603	GLIS2	NKL|NPHP7	GLIS family zinc finger 2	protein-coding	61.45	9.71	6.328527291	8.28E-23
chr16-414	chr16	4954919	4956178	+	21.1	1259	"intron (NM_002705, intron 2 of 21)"	L1MB7|LINE|L1	31588	NM_002705	5493	Hs.192233	NM_002705	ENSG00000118898	PPL	-	periplakin	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr16-415	chr16	5478278	5479278	+	19.2	1000	Intergenic	Intergenic	187473	NR_110902	101926950	Hs.613285	NR_110902	ENSG00000260338	LINC01570	-	long intergenic non-protein coding RNA 1570	ncRNA	19.2	2.43	7.901234568	1.91E-09
chr16-417	chr16	14067523	14068523	+	19.2	1000	Intergenic	AluSg|SINE|Alu	41852	NR_110909	101927311		NR_110909	ENSG00000262097	LOC101927311	-	uncharacterized LOC101927311	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr16-422	chr16	22664976	22665976	+	17.9	1000	Intergenic	MLT1A0|LTR|ERVL-MaLR	108457	NR_003676	653786	Hs.564945	NR_003676	ENSG00000257838	LOC653786	-	otoancorin pseudogene	pseudo	17.92	3.88	4.618556701	3.85E-06
chr16-424	chr16	26371144	26372144	+	17.9	1000	Intergenic	MIRb|SINE|MIR	335086	NR_036146	100422923		NR_036146	ENSG00000265005	MIR548W	-	microRNA 548w	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr16-425	chr16	26577929	26579281	+	19.8	1352	Intergenic	Intergenic	-499614	NM_001145545	162083	Hs.120831	NM_182831	ENSG00000234186	C16orf82	TNT	chromosome 16 open reading frame 82	protein-coding	19.84	1.46	13.5890411	1.82E-12
chr16-429	chr16	31386019	31387019	+	18.6	1000	"intron (NM_001286375, intron 20 of 30)"	AluSx1|SINE|Alu	-18114	NM_005353	3681	Hs.679163	NM_005353	ENSG00000156886	ITGAD	ADB2|CD11D	integrin subunit alpha D	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr16-430	chr16	47983620	47984620	+	19.2	1000	Intergenic	Intergenic	-63079	NR_110649	100507534	Hs.407601	NR_110649	ENSG00000261325	LOC100507534	-	uncharacterized LOC100507534	ncRNA	19.2	1.46	13.15068493	1.82E-12
chr16-437	chr16	49918147	49921344	+	41	3197	Intergenic	MER21C|LTR|ERVL	-27915	NM_001271620	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	40.97	6.31	6.492868463	4.76E-16
chr16-440	chr16	56152860	56153860	+	17.9	1000	"intron (NR_027078, intron 2 of 4)"	"intron (NR_027078, intron 2 of 4)"	71646	NR_027078	283856	Hs.707433	NR_027078	ENSG00000246379	LOC283856	-	uncharacterized LOC283856	ncRNA	17.92	2.43	7.374485597	1.53E-08
chr16-442	chr16	56690009	56694361	+	75.5	4352	"intron (NM_005949, intron 1 of 2)"	"intron (NM_005949, intron 1 of 2)"	330	NM_005949	4494	Hs.513626	NM_005949	ENSG00000198417	MT1F	MT1	metallothionein 1F	protein-coding	75.53	11.65	6.483261803	3.63E-28
chr16-443	chr16	56696187	56697578	+	21.8	1391	Intergenic	Intergenic	5027	NM_005949	4494	Hs.513626	NM_005949	ENSG00000198417	MT1F	MT1	metallothionein 1F	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr16-445	chr16	57381993	57382993	+	19.2	1000	Intergenic	L1MB7|LINE|L1	-10202	NM_002990	6367	Hs.534347	NM_002990	ENSG00000102962	CCL22	A-152E5.1|ABCD-1|DC/B-CK|MDC|SCYA22|STCP-1	C-C motif chemokine ligand 22	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr16-446	chr16	58297512	58298512	+	17.9	1000	"intron (NM_014157, intron 6 of 8)"	"intron (NM_014157, intron 6 of 8)"	14172	NM_014157	29070	Hs.11614	NM_014157	ENSG00000103021	CCDC113	HSPC065	coiled-coil domain containing 113	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr16-458	chr16	73390191	73391191	+	19.2	1000	Intergenic	Intergenic	-30013	NR_038234	100506172	Hs.434230	NR_038234	ENSG00000258779	LINC01568	-	long intergenic non-protein coding RNA 1568	ncRNA	19.2	0.97	19.79381443	5.65E-15
chr16-460	chr16	79268521	79269809	+	21.1	1288	Intergenic	Intergenic	365457	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr16-461	chr16	79344192	79345484	+	19.2	1292	Intergenic	Intergenic	289784	NM_005360	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr16-463	chr16	80417333	80419113	+	30.1	1780	"intron (NR_120307, intron 2 of 5)"	"intron (NR_120307, intron 2 of 5)"	-156408	NM_001305017	83657	Hs.98849	NM_130897	ENSG00000168589	DYNLRB2	DNCL2B|DNLC2B|ROBLD2	dynein light chain roadblock-type 2	protein-coding	30.08	3.88	7.75257732	2.58E-13
chr16-465	chr16	82087150	82088150	+	17.9	1000	"intron (NM_002153, intron 1 of 4)"	LTR85a|LTR|Gypsy?	18792	NM_002153	3294	Hs.162795	NM_002153	ENSG00000086696	HSD17B2	EDH17B2|HSD17|SDR9C2	hydroxysteroid 17-beta dehydrogenase 2	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr16-467	chr16	84372636	84373636	+	17.9	1000	Intergenic	Intergenic	-28993	NM_014861	9914	Hs.6168	NM_014861	ENSG00000064270	ATP2C2	SPCA2	ATPase secretory pathway Ca2+ transporting 2	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr16-469	chr16	85061662	85064827	+	48.6	3165	"intron (NM_001286566, intron 1 of 11)"	"intron (NM_001286566, intron 1 of 11)"	1887	NM_014732	9764	Hs.301658	NM_014732	ENSG00000135709	KIAA0513	-	KIAA0513	protein-coding	48.65	10.19	4.774288518	1.45E-14
chr16-470	chr16	85113393	85116837	+	41	3444	"intron (NM_001286566, intron 9 of 11)"	"intron (NM_001286566, intron 9 of 11)"	18297	NM_001286565	9764	Hs.301658	NM_014732	ENSG00000135709	KIAA0513	-	KIAA0513	protein-coding	40.97	5.82	7.0395189	5.30E-17
chr16-472	chr16	85255063	85258407	+	52.5	3344	Intergenic	Intergenic	-59829	NR_038859	197196	Hs.679002	NM_153238	ENSG00000179219	LINC00311	NCRNA00311|TMEM148	long intergenic non-protein coding RNA 311	ncRNA	52.49	7.77	6.755469755	1.02E-20
chr16-478	chr16	85915277	85917450	+	41	2173	Intergenic	Intergenic	-16411	NM_002163	3394	Hs.137427	NM_002163	ENSG00000140968	IRF8	H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8	interferon regulatory factor 8	protein-coding	40.97	5.34	7.672284644	4.72E-18
chr16-484	chr16	86066785	86068301	+	25	1516	Intergenic	Intergenic	115590	NR_106832	102466732		NR_106832	ENSG00000274134	MIR6774	hsa-mir-6774	microRNA 6774	ncRNA	24.96	4.85	5.146391753	2.27E-08
chr16-485	chr16	86089075	86090075	+	18.6	1000	Intergenic	L1ME1|LINE|L1	137622	NR_106832	102466732		NR_106832	ENSG00000274134	MIR6774	hsa-mir-6774	microRNA 6774	ncRNA	18.56	3.4	5.458823529	8.42E-07
chr16-490	chr16	86611357	86612357	+	19.2	1000	promoter-TSS (NM_005250)	promoter-TSS (NM_005250)	-258	NM_005250	2300	Hs.533830	NM_005250	ENSG00000176678	FOXL1	FKH6|FKHL11|FREAC7	forkhead box L1	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr16-491	chr16	86668894	86672991	+	61.4	4097	Intergenic	Intergenic	58827	NM_005250	2300	Hs.533830	NM_005250	ENSG00000176678	FOXL1	FKH6|FKHL11|FREAC7	forkhead box L1	protein-coding	61.45	9.71	6.328527291	8.28E-23
chr16-493	chr16	86744890	86745890	+	17.9	1000	Intergenic	L2a|LINE|L2	10175	NR_135181	101928614	Hs.399823	NR_135181	ENSG00000260026	LOC101928614	-	uncharacterized LOC101928614	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr16-498	chr16	89236199	89240564	+	64.6	4365	"intron (NM_004933, intron 1 of 13)"	"intron (NM_004933, intron 1 of 13)"	218	NM_004933	1013	Hs.148090	NM_004933	ENSG00000129910	CDH15	CDH14|CDH3|CDHM|MCAD|MRD3	cadherin 15	protein-coding	64.65	10.68	6.053370787	1.08E-22
chr16-503	chr16	1273180	1275164	+	32.6	1984	"intron (NM_012467, intron 2 of 5)"	"intron (NM_012467, intron 2 of 5)"	1082	NM_012467	25823	Hs.592076	NM_012467	ENSG00000116176	TPSG1	PRSS31|TMT|trpA	tryptase gamma 1	protein-coding	32.64	3.4	9.6	2.00E-16
chr16-504	chr16	2376949	2377949	+	18.6	1000	"intron (NM_001089, intron 3 of 32)"	"intron (NM_001089, intron 3 of 32)"	13298	NM_001089	21	Hs.26630	NM_001089	ENSG00000167972	ABCA3	ABC-C|ABC3|EST111653|LBM180|SMDP3	ATP binding cassette subfamily A member 3	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr16-505	chr16	2382118	2383674	+	30.7	1556	"intron (NM_001089, intron 1 of 32)"	AluJr|SINE|Alu	7851	NM_001089	21	Hs.26630	NM_001089	ENSG00000167972	ABCA3	ABC-C|ABC3|EST111653|LBM180|SMDP3	ATP binding cassette subfamily A member 3	protein-coding	30.72	5.34	5.752808989	2.29E-11
chr16-510	chr16	4215328	4216647	+	20.5	1319	Intergenic	Intergenic	-49801	NM_001116	115	Hs.391860	NM_001116	ENSG00000162104	ADCY9	AC9|ACIX	adenylate cyclase 9	protein-coding	20.48	2.43	8.427983539	2.25E-10
chr16-516	chr16	8712858	8713858	+	17.3	1000	Intergenic	AluSz|SINE|Alu	-2139	NR_134608	79091	Hs.306380	NM_024109	ENSG00000067365	METTL22	C16orf68	methyltransferase like 22	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr16-517	chr16	9356298	9357298	+	17.9	1000	Intergenic	AluJo|SINE|Alu	-92647	NR_135195	101927009	Hs.537273	NR_135195	ENSG00000261617	LOC101927009	-	uncharacterized LOC101927009	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr16-518	chr16	9994856	9995856	+	17.3	1000	"intron (NM_000833, intron 4 of 13)"	AluSz6|SINE|Alu	280568	NM_001134408	2903	Hs.411472	NM_000833	ENSG00000183454	GRIN2A	EPND|FESD|GluN2A|LKS|NMDAR2A|NR2A	glutamate ionotropic receptor NMDA type subunit 2A	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr16-523	chr16	15666211	15667211	+	17.3	1000	"intron (NM_001142469, intron 3 of 5)"	THE1A|LTR|ERVL-MaLR	38241	NR_106761	102465252		NR_106761	ENSG00000166783	MIR6506	hsa-mir-6506	microRNA 6506	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr16-524	chr16	17886425	17887425	+	17.3	1000	Intergenic	L1M7|LINE|L1	-322187	NM_022166	64131	Hs.22907	NM_022166	ENSG00000103489	XYLT1	DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I	xylosyltransferase 1	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr16-525	chr16	20967658	20968658	+	18.6	1000	"intron (NM_001347886, intron 54 of 61)"	AluSz6|SINE|Alu	55732	NM_001302835	57149	Hs.745012	NM_020424	ENSG00000102897	LYRM1	A211C6.1	LYR motif containing 1	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr16-532	chr16	22863670	22864670	+	17.9	1000	"intron (NM_006043, intron 1 of 1)"	"intron (NM_006043, intron 1 of 1)"	38310	NM_006043	9956	Hs.115830	NM_006043	ENSG00000122254	HS3ST2	30ST2|3OST2	heparan sulfate-glucosamine 3-sulfotransferase 2	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr16-534	chr16	26871685	26872685	+	17.9	1000	Intergenic	LOR1a|LTR|ERV1	-206034	NM_001145545	162083	Hs.120831	NM_182831	ENSG00000234186	C16orf82	TNT	chromosome 16 open reading frame 82	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr16-536	chr16	28012114	28013114	+	17.3	1000	"intron (NM_001109763, intron 1 of 6)"	"intron (NM_001109763, intron 1 of 6)"	62216	NM_001323901	146395	Hs.91910	NM_144675	ENSG00000169181	GSG1L	PRO19651	GSG1 like	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr16-544	chr16	50630870	50632659	+	28.2	1789	"intron (NM_033119, intron 3 of 9)"	"intron (NM_033119, intron 3 of 9)"	49523	NM_033119	85407	Hs.187578	NM_033119	ENSG00000140807	NKD1	Naked1	naked cuticle homolog 1	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr16-545	chr16	50671510	50672510	+	17.9	1000	"3' UTR (NM_033119, exon 10 of 10)"	"3' UTR (NM_033119, exon 10 of 10)"	-30756	NR_110908	101927272	Hs.460777	NR_110908	ENSG00000260249	LOC101927272	-	uncharacterized LOC101927272	ncRNA	17.92	1.46	12.2739726	2.41E-11
chr16-547	chr16	55139068	55140068	+	16	1000	Intergenic	Intergenic	174457	NM_005853	10265	Hs.435730	NM_005853	ENSG00000176842	IRX5	HMMS|IRX-2a|IRXB2	iroquois homeobox 5	protein-coding	16	3.88	4.12371134	7.91E-05
chr16-548	chr16	56608159	56609510	+	25.6	1351	Intergenic	HAL1|LINE|L1	9873	NM_032935	84560	Hs.567624	NM_032935	ENSG00000102891	MT4	MT-4|MT-IV|MTIV	metallothionein 4	protein-coding	25.6	4.37	5.85812357	7.40E-10
chr16-549	chr16	56653402	56654402	+	17.3	1000	Intergenic	AluSx1|SINE|Alu	2529	NR_001447	4500	Hs.647358	NR_001447	ENSG00000260549	MT1L	MT1|MT1R|MTF	metallothionein 1L (gene/pseudogene)	pseudo	17.28	3.88	4.453608247	1.81E-05
chr16-55	chr16	1981685	1982960	+	31.4	1275	Intergenic	Intergenic	11005	NM_016332	51734	Hs.655346	NM_016332	ENSG00000198736	MSRB1	HSPC270|SELR|SELX|SEPX1|SepR	methionine sulfoxide reductase B1	protein-coding	31.36	3.4	9.223529412	1.89E-15
chr16-564	chr16	75224237	75226035	+	31.4	1798	Intergenic	AluSx1|SINE|Alu	15936	NM_001025200	440387	Hs.610926	NM_001025200	ENSG00000168928	CTRB2	-	chymotrypsinogen B2	protein-coding	31.36	7.77	4.036036036	3.04E-08
chr16-565	chr16	75593913	75595437	+	22.4	1524	Intergenic	AluJo|SINE|Alu	-4491	NM_001077418	79583	Hs.156784	NM_001077416	ENSG00000205084	TMEM231	ALYE870|JBTS20|MKS11|PRO1886	transmembrane protein 231	protein-coding	22.4	0.97	23.09278351	1.19E-17
chr16-566	chr16	77404099	77405099	+	17.9	1000	"intron (NM_199355, intron 3 of 22)"	AluSq|SINE|Alu	64412	NM_001326358	170692	Hs.188746	NM_139054	ENSG00000140873	ADAMTS18	ADAMTS21|KNO2|MMCAT	ADAM metallopeptidase with thrombospondin type 1 motif 18	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr16-572	chr16	82949730	82950730	+	17.9	1000	"intron (NM_001220490, intron 2 of 12)"	"intron (NM_001220490, intron 2 of 12)"	73673	NR_110937	101928417	Hs.569538	NR_110937	ENSG00000260832	LOC101928417	-	uncharacterized LOC101928417	ncRNA	17.92	2.43	7.374485597	1.53E-08
chr16-574	chr16	84320243	84323236	+	42.9	2993	Intergenic	MLT1D|LTR|ERVL-MaLR	-6573	NM_021197	58189	Hs.36688	NM_021197	ENSG00000103175	WFDC1	PS20	WAP four-disulfide core domain 1	protein-coding	42.89	8.74	4.907322654	5.23E-13
chr16-584	chr16	85289248	85290248	+	16.6	1000	Intergenic	Intergenic	-26816	NR_038859	197196	Hs.679002	NM_153238	ENSG00000179219	LINC00311	NCRNA00311|TMEM148	long intergenic non-protein coding RNA 311	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr16-587	chr16	85462431	85463431	+	16.6	1000	Intergenic	Intergenic	-123000	NR_049816	100847022		NR_049816	ENSG00000266307	MIR5093	-	microRNA 5093	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr16-588	chr16	85859551	85860551	+	17.9	1000	Intergenic	Intergenic	26747	NM_001318797	1327	Hs.433419	NM_001861	ENSG00000131143	COX4I1	COX IV-1|COX4|COX4-1|COXIV|COXIV-1	cytochrome c oxidase subunit 4I1	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr16-589	chr16	85958898	85960429	+	25.6	1531	Intergenic	Intergenic	7710	NR_106832	102466732		NR_106832	ENSG00000274134	MIR6774	hsa-mir-6774	microRNA 6774	ncRNA	25.6	3.88	6.597938144	1.00E-10
chr16-591	chr16	86174815	86175815	+	17.3	1000	Intergenic	Intergenic	-54472	NR_103859	100506542	Hs.111902	NR_103859	ENSG00000269186	LINC01082	TCONS_00024492	long intergenic non-protein coding RNA 1082	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr16-594	chr16	86527547	86530149	+	42.9	2602	"intron (NR_036444, intron 1 of 3)"	CpG	13618	NR_036444	400550	Hs.448825	NR_033925	ENSG00000268388	FENDRR	FOXF1-AS1|TCONS_00024240|lincFOXF1|onco-lncRNA-21	FOXF1 adjacent non-coding developmental regulatory RNA	ncRNA	42.89	1.94	22.10824742	2.46E-32
chr16-595	chr16	86532088	86539771	+	133.1	7683	"intron (NR_036444, intron 1 of 3)"	"intron (NR_036444, intron 1 of 3)"	6537	NR_036444	400550	Hs.448825	NR_033925	ENSG00000268388	FENDRR	FOXF1-AS1|TCONS_00024240|lincFOXF1|onco-lncRNA-21	FOXF1 adjacent non-coding developmental regulatory RNA	ncRNA	133.14	19.9	6.690452261	1.71E-49
chr16-604	chr16	751614	752614	+	17.9	1000	"intron (NM_153350, intron 1 of 5)"	"intron (NM_153350, intron 1 of 5)"	3711	NM_153350	146330	Hs.513244	NM_153350	ENSG00000127585	FBXL16	C16orf22|Fbl16|c380A1.1	F-box and leucine rich repeat protein 16	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr16-607	chr16	2074347	2079013	+	90.9	4666	promoter-TSS (NM_001130012)	promoter-TSS (NM_001130012)	-189	NM_001130012	9351	Hs.440896	NM_004785	ENSG00000065054	SLC9A3R2	E3KARP|NHE3RF2|NHERF-2|NHERF2|OCTS2|SIP-1|SIP1|TKA-1	SLC9A3 regulator 2	protein-coding	90.89	8.74	10.3993135	2.34E-46
chr16-610	chr16	2367919	2368919	+	16.6	1000	"intron (NM_001089, intron 8 of 32)"	MER3|DNA|hAT-Charlie	22328	NM_001089	21	Hs.26630	NM_001089	ENSG00000167972	ABCA3	ABC-C|ABC3|EST111653|LBM180|SMDP3	ATP binding cassette subfamily A member 3	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr16-611	chr16	2388085	2390730	+	49.3	2645	"intron (NM_001089, intron 1 of 32)"	"intron (NM_001089, intron 1 of 32)"	1340	NM_001089	21	Hs.26630	NM_001089	ENSG00000167972	ABCA3	ABC-C|ABC3|EST111653|LBM180|SMDP3	ATP binding cassette subfamily A member 3	protein-coding	49.29	6.8	7.248529412	3.87E-20
chr16-614	chr16	2843863	2844863	+	17.9	1000	Intergenic	LTR8A|LTR|ERV1	-4123	NM_001135086	360226	Hs.647401	NM_001135086		PRSS41	TESSP1	"protease, serine 41"	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr16-620	chr16	4099239	4100239	+	16.6	1000	"intron (NM_001116, intron 2 of 10)"	"intron (NM_001116, intron 2 of 10)"	66447	NM_001116	115	Hs.391860	NM_001116	ENSG00000162104	ADCY9	AC9|ACIX	adenylate cyclase 9	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr16-624	chr16	5407923	5408923	+	17.9	1000	Intergenic	AT_rich|Low_complexity|Low_complexity	257828	NR_110902	101926950	Hs.613285	NR_110902	ENSG00000260338	LINC01570	-	long intergenic non-protein coding RNA 1570	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr16-625	chr16	5432265	5433265	+	17.9	1000	Intergenic	Intergenic	233486	NR_110902	101926950	Hs.613285	NR_110902	ENSG00000260338	LINC01570	-	long intergenic non-protein coding RNA 1570	ncRNA	17.92	3.4	5.270588235	8.42E-07
chr16-626	chr16	7082542	7083798	+	19.2	1256	"intron (NM_001142334, intron 1 of 13)"	"intron (NM_001142334, intron 1 of 13)"	259360	NM_001142334	54715	Hs.459842	NM_018723	ENSG00000078328	RBFOX1	2BP1|A2BP1|FOX-1|FOX1|HRNBP1	"RNA binding protein, fox-1 homolog 1"	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr16-627	chr16	9313736	9315029	+	21.1	1293	Intergenic	Intergenic	128845	NM_014117	29035	Hs.221497	NM_014117	ENSG00000182831	C16orf72	PRO0149	chromosome 16 open reading frame 72	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr16-628	chr16	10900041	10901041	+	17.3	1000	"intron (NR_134903, intron 1 of 8)"	AluSx1|SINE|Alu	12110	NR_134903	780776	Hs.371576	NM_001079512	ENSG00000166676	TVP23A	FAM18A|YDR084C	trans-golgi network vesicle protein 23 homolog A	protein-coding	17.28	1.46	11.83561644	2.99E-10
chr16-635	chr16	22692907	22693907	+	17.3	1000	Intergenic	Intergenic	-132453	NM_006043	9956	Hs.115830	NM_006043	ENSG00000122254	HS3ST2	30ST2|3OST2	heparan sulfate-glucosamine 3-sulfotransferase 2	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr16-639	chr16	23208022	23211243	+	44.8	3221	"intron (NM_001039, intron 6 of 12)"	"intron (NM_001039, intron 6 of 12)"	15592	NM_001039	6340	Hs.371727	NM_001039	ENSG00000166828	SCNN1G	BESC3|ENaCg|ENaCgamma|PHA1|SCNEG	sodium channel epithelial 1 gamma subunit	protein-coding	44.81	6.31	7.101426307	1.43E-18
chr16-640	chr16	23757016	23758016	+	17.9	1000	Intergenic	L2|LINE|L2	-8432	NM_022097	63928	Hs.178589	NM_022097	ENSG00000166869	CHP2	-	calcineurin like EF-hand protein 2	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr16-644	chr16	26994365	26995365	+	17.9	1000	Intergenic	Intergenic	-83354	NM_001145545	162083	Hs.120831	NM_182831	ENSG00000234186	C16orf82	TNT	chromosome 16 open reading frame 82	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr16-646	chr16	27077469	27078469	+	17.9	1000	promoter-TSS (NM_001145545)	promoter-TSS (NM_001145545)	-250	NM_001145545	162083	Hs.120831	NM_182831	ENSG00000234186	C16orf82	TNT	chromosome 16 open reading frame 82	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr16-648	chr16	27827619	27829957	+	43.5	2338	"intron (NM_001109763, intron 5 of 6)"	MER5C1|DNA|hAT-Charlie	70690	NM_144675	146395	Hs.91910	NM_144675	ENSG00000169181	GSG1L	PRO19651	GSG1 like	protein-coding	43.53	4.85	8.975257732	4.10E-21
chr16-655	chr16	48000674	48001674	+	16.6	1000	Intergenic	Intergenic	-80133	NR_110649	100507534	Hs.407601	NR_110649	ENSG00000261325	LOC100507534	-	uncharacterized LOC100507534	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr16-656	chr16	48242883	48244164	+	20.5	1281	"intron (NM_145186, intron 11 of 28)"	MER1B|DNA|hAT-Charlie	22659	NM_033151	85320	Hs.652267	NM_032583	ENSG00000121270	ABCC11	EWWD|MRP8|WW	ATP binding cassette subfamily C member 11	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr16-657	chr16	49212036	49213036	+	16.6	1000	Intergenic	Intergenic	103206	NM_004352	869	Hs.458423	NM_004352	ENSG00000102924	CBLN1	-	cerebellin 1 precursor	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr16-662	chr16	49721405	49725221	+	50.6	3816	"intron (NM_001271620, intron 3 of 7)"	AluJo|SINE|Alu	-25171	NM_001330533	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	50.57	8.74	5.78604119	2.17E-17
chr16-666	chr16	50490225	50491225	+	17.9	1000	Intergenic	Intergenic	-87880	NM_001173984	29117	Hs.437894	NM_013263	ENSG00000166164	BRD7	BP75|CELTIX1|NAG4	bromodomain containing 7	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr16-671	chr16	55090381	55092251	+	32	1870	Intergenic	Intergenic	126205	NM_005853	10265	Hs.435730	NM_005853	ENSG00000176842	IRX5	HMMS|IRX-2a|IRXB2	iroquois homeobox 5	protein-coding	32	3.4	9.411764706	2.00E-16
chr16-674	chr16	55403388	55404388	+	17.9	1000	Intergenic	Intergenic	45417	NM_024335	79190	Hs.369907	NM_024335	ENSG00000159387	IRX6	IRX-3|IRX7|IRXB3	iroquois homeobox 6	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr16-676	chr16	56178593	56179593	+	16.6	1000	"intron (NR_027078, intron 2 of 4)"	L1ME3C|LINE|L1	45913	NR_027078	283856	Hs.707433	NR_027078	ENSG00000246379	LOC283856	-	uncharacterized LOC283856	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr16-677	chr16	56568150	56569150	+	17.3	1000	Intergenic	AluJb|SINE|Alu	-14642	NM_031885	583	Hs.333738	NM_031885	ENSG00000125124	BBS2	BBS|RP74	Bardet-Biedl syndrome 2	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr16-678	chr16	56623914	56624914	+	17.9	1000	"intron (NM_005954, intron 2 of 2)"	"intron (NM_005954, intron 2 of 2)"	1147	NM_005954	4504	Hs.73133	NM_005954	ENSG00000087250	MT3	GIF|GIFB|GRIF|ZnMT3	metallothionein 3	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr16-684	chr16	56681177	56687245	+	87.7	6068	Intergenic	MLT1A0|LTR|ERVL-MaLR	-1600	NM_005947	4490	Hs.656629	NM_005947	ENSG00000169688	MT1B	MT-1B|MT-IB|MT1|MT1Q|MTP	metallothionein 1B	protein-coding	87.69	16.5	5.314545455	3.95E-27
chr16-689	chr16	56934698	56935698	+	15.4	1000	"intron (NM_001126108, intron 23 of 25)"	L2b|LINE|L2	-2978	NR_106923	102466752		NR_106923	ENSG00000283471	MIR6863	hsa-mir-6863	microRNA 6863	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr16-691	chr16	57644886	57647608	+	43.5	2722	Intergenic	MER63D|DNA|hAT-Blackjack	-7358	NM_001290143	9289	Hs.513633	NM_005682	ENSG00000205336	ADGRG1	BFPP|BPPR|GPR56|TM7LN4|TM7XN1	adhesion G protein-coupled receptor G1	protein-coding	43.53	7.28	5.979395604	6.36E-16
chr16-695	chr16	66325842	66328998	+	47.4	3156	Intergenic	Intergenic	-73090	NM_001795	1003	Hs.76206	NM_001795	ENSG00000179776	CDH5	7B4|CD144	cadherin 5	protein-coding	47.37	10.68	4.435393258	2.70E-13
chr16-696	chr16	66342692	66343954	+	18.6	1262	Intergenic	Intergenic	-57187	NM_001795	1003	Hs.76206	NM_001795	ENSG00000179776	CDH5	7B4|CD144	cadherin 5	protein-coding	18.56	1.46	12.71232877	2.41E-11
chr16-697	chr16	67019012	67020012	+	17.9	1000	Intergenic	Intergenic	-2980	NM_173815	283848	Hs.346947	NM_173815	ENSG00000172824	CES4A	CES6|CES8	carboxylesterase 4A	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr16-698	chr16	67408075	67409075	+	16	1000	"intron (NM_018296, intron 9 of 13)"	AluSx1|SINE|Alu	18863	NM_015964	51673	Hs.534458	NM_015964	ENSG00000159713	TPPP3	CGI-38|TPPP/p20|p20|p25gamma	tubulin polymerization promoting protein family member 3	protein-coding	16	0.97	16.49484536	3.54E-11
chr16-700	chr16	73090935	73091935	+	16.6	1000	"intron (NM_001164766, intron 1 of 8)"	A-rich|Low_complexity|Low_complexity	1099	NM_001164766	463	Hs.598297	NM_006885	ENSG00000140836	ZFHX3	ATBF1|ATBT|ZNF927	zinc finger homeobox 3	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr16-704	chr16	74807278	74808278	+	17.9	1000	"intron (NM_024306, intron 1 of 6)"	"intron (NM_024306, intron 1 of 6)"	951	NM_024306	79152	Hs.461329	NM_024306	ENSG00000103089	FA2H	FAAH|FAH1|FAXDC1|SCS7|SPG35	fatty acid 2-hydroxylase	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr16-706	chr16	78000741	78001741	+	17.9	1000	"intron (NM_020927, intron 7 of 8)"	"intron (NM_020927, intron 7 of 8)"	-55202	NM_005752	10143	Hs.177936	NM_005752	ENSG00000166509	CLEC3A	CLECSF1	C-type lectin domain family 3 member A	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr16-709	chr16	80689540	80690540	+	16.6	1000	"intron (NM_152342, intron 2 of 6)"	"intron (NM_152342, intron 2 of 6)"	-83335	NR_104666	101928276	Hs.149769	NR_104665	ENSG00000260737	LINC01227	-	long intergenic non-protein coding RNA 1227	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr16-715	chr16	84191040	84192040	+	16.6	1000	"intron (NM_178452, intron 5 of 11)"	AluY|SINE|Alu	-1105	NM_001318756	123872	Hs.310164	NM_178452	ENSG00000154099	DNAAF1	CILD13|LRRC50|ODA7|swt	dynein axonemal assembly factor 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr16-716	chr16	84259114	84260114	+	17.9	1000	"intron (NM_172347, intron 2 of 2)"	A-rich|Low_complexity|Low_complexity	13742	NM_172347	93107	Hs.335877	NM_133490	ENSG00000168418	KCNG4	KV6.3|KV6.4	potassium voltage-gated channel modifier subfamily G member 4	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr16-719	chr16	84455537	84456537	+	16.6	1000	"exon (NM_001286527, exon 8 of 28)"	"exon (NM_001286527, exon 8 of 28)"	15843	NM_001291454	9914	Hs.6168	NM_014861	ENSG00000064270	ATP2C2	SPCA2	ATPase secretory pathway Ca2+ transporting 2	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr16-720	chr16	84476598	84478041	+	19.8	1443	"intron (NM_001291454, intron 12 of 23)"	"intron (NM_001291454, intron 12 of 23)"	37125	NM_001291454	9914	Hs.6168	NM_014861	ENSG00000064270	ATP2C2	SPCA2	ATPase secretory pathway Ca2+ transporting 2	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr16-723	chr16	84939278	84941665	+	39.7	2387	"3' UTR (NM_031476, exon 15 of 15)"	"3' UTR (NM_031476, exon 15 of 15)"	86884	NM_031476	83716	Hs.513779	NM_031476	ENSG00000103196	CRISPLD2	CRISP11|LCRISP2|LGL1	cysteine rich secretory protein LCCL domain containing 2	protein-coding	39.69	4.85	8.183505155	2.73E-18
chr16-725	chr16	84951227	84952501	+	23	1274	Intergenic	Intergenic	93277	NM_017740	55625	Hs.461610	NM_017740	ENSG00000153786	ZDHHC7	DHHC7|SERZ-B|SERZ1|ZNF370	zinc finger DHHC-type containing 7	protein-coding	23.04	2.43	9.481481481	2.61E-12
chr16-731	chr16	85311318	85322015	+	136.3	10697	"non-coding (NR_038859, exon 1 of 3)"	"non-coding (NR_038859, exon 1 of 3)"	102	NR_038859	197196	Hs.679002	NM_153238	ENSG00000179219	LINC00311	NCRNA00311|TMEM148	long intergenic non-protein coding RNA 311	ncRNA	136.34	26.21	5.201831362	1.35E-40
chr16-734	chr16	85783043	85790390	+	108.8	7347	Intergenic	Intergenic	-2027	NM_206967	404550	Hs.461655	NM_206967	ENSG00000154102	C16orf74	-	chromosome 16 open reading frame 74	protein-coding	108.81	11.16	9.75	5.70E-53
chr16-735	chr16	85919831	85924161	+	64.6	4330	Intergenic	Intergenic	-10778	NM_002163	3394	Hs.137427	NM_002163	ENSG00000140968	IRF8	H-ICSBP|ICSBP|ICSBP1|IMD32A|IMD32B|IRF-8	interferon regulatory factor 8	protein-coding	64.65	14.56	4.440247253	3.04E-17
chr16-745	chr16	86361514	86363546	+	32	2032	Intergenic	Intergenic	16755	NR_024406	732275	Hs.558087	NR_024406	ENSG00000168367	LINC00917	-	long intergenic non-protein coding RNA 917	ncRNA	32	4.85	6.597938144	5.03E-13
chr16-746	chr16	86377745	86378745	+	17.9	1000	"intron (NR_024406, intron 1 of 6)"	"intron (NR_024406, intron 1 of 6)"	1040	NR_024406	732275	Hs.558087	NR_024406	ENSG00000168367	LINC00917	-	long intergenic non-protein coding RNA 917	ncRNA	17.92	0.97	18.4742268	1.12E-13
chr16-749	chr16	86628714	86629714	+	16	1000	Intergenic	Intergenic	17099	NM_005250	2300	Hs.533830	NM_005250	ENSG00000176678	FOXL1	FKH6|FKHL11|FREAC7	forkhead box L1	protein-coding	16	1.94	8.24742268	7.67E-08
chr16-751	chr16	86856898	86858180	+	21.8	1282	Intergenic	MLT1I|LTR|ERVL-MaLR	101842	NR_135183	102724344	Hs.585769	NR_135182	ENSG00000261175	LOC102724344	-	uncharacterized LOC102724344	ncRNA	21.76	1.94	11.21649485	8.00E-13
chr16-757	chr16	87509075	87510075	+	17.9	1000	"intron (NM_015144, intron 1 of 12)"	L1ME2z|LINE|L1	15885	NM_015144	23174	Hs.156231	NM_015144	ENSG00000140948	ZCCHC14	BDG-29|BDG29	zinc finger CCHC-type containing 14	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr16-761	chr16	88293311	88294311	+	14.1	1000	Intergenic	AluSz|SINE|Alu	65924	NR_110944	101928880	Hs.634835	NR_110944	ENSG00000260420	LOC101928880	LA16c-444G7.2	uncharacterized LOC101928880	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr16-762	chr16	88336574	88337574	+	17.3	1000	Intergenic	Intergenic	109187	NR_110944	101928880	Hs.634835	NR_110944	ENSG00000260420	LOC101928880	LA16c-444G7.2	uncharacterized LOC101928880	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr16-765	chr16	88753159	88755388	+	31.4	2229	TTS (NR_024399)	TTS (NR_024399)	-1391	NM_178310	333929	Hs.673548	NM_178310	ENSG00000185669	SNAI3	SMUC|SNAIL3|ZNF293|Zfp293	snail family transcriptional repressor 3	protein-coding	31.36	5.82	5.388316151	1.29E-10
chr16-769	chr16	1057724	1058724	+	16.6	1000	Intergenic	Intergenic	26416	NM_014587	30812	Hs.243678	NM_014587	ENSG00000005513	SOX8	-	SRY-box 8	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr16-771	chr16	1268863	1270173	+	19.8	1310	"intron (NM_001005407, intron 33 of 33)"	"intron (NM_001005407, intron 33 of 33)"	5736	NM_012467	25823	Hs.592076	NM_012467	ENSG00000116176	TPSG1	PRSS31|TMT|trpA	tryptase gamma 1	protein-coding	19.84	0	20.43753219	2.52E-19
chr16-773	chr16	1910187	1911495	+	19.8	1308	"intron (NM_152764, intron 4 of 12)"	"intron (NM_152764, intron 4 of 12)"	11261	NM_152764	254528	Hs.729604	NM_152764	ENSG00000162039	MEIOB	C16orf73|gs129	meiosis specific with OB domains	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr16-78	chr16	50577661	50579673	+	39	2012	Intergenic	L2b|LINE|L2	-3574	NM_033119	85407	Hs.187578	NM_033119	ENSG00000140807	NKD1	Naked1	naked cuticle homolog 1	protein-coding	39.04	7.77	5.024453024	3.34E-12
chr16-780	chr16	4004032	4005625	+	24.3	1593	Intergenic	Intergenic	-4383	NR_120311	102724927	Hs.364739	NR_120311	ENSG00000262185	LOC102724927	-	uncharacterized LOC102724927	ncRNA	24.32	4.85	5.01443299	2.27E-08
chr16-783	chr16	4183649	4184649	+	15.4	1000	Intergenic	Intergenic	-17963	NM_001116	115	Hs.391860	NM_001116	ENSG00000162104	ADCY9	AC9|ACIX	adenylate cyclase 9	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr16-784	chr16	4290911	4291911	+	16.6	1000	"intron (NM_001323667, intron 1 of 6)"	"intron (NM_001323667, intron 1 of 6)"	670	NM_001098814	6345	Hs.10041	NM_001098814	ENSG00000185739	SRL	-	sarcalumenin	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr16-785	chr16	5184715	5185715	+	16.6	1000	Intergenic	Intergenic	-37394	NM_001289029	196483	Hs.406461	NM_201400	ENSG00000118894	EEF2KMT	FAM86A|SB153|eEF2-KMT	eukaryotic elongation factor 2 lysine methyltransferase	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr16-786	chr16	8407323	8408323	+	16	1000	Intergenic	Intergenic	180005	NM_001290098	283953	Hs.150849	NM_001146336	ENSG00000232258	TMEM114	-	transmembrane protein 114	protein-coding	16	3.88	4.12371134	7.91E-05
chr16-787	chr16	8538283	8540156	+	32.6	1873	Intergenic	Intergenic	48609	NM_001290098	283953	Hs.150849	NM_001146336	ENSG00000232258	TMEM114	-	transmembrane protein 114	protein-coding	32.64	4.37	7.469107551	5.18E-14
chr16-79	chr16	50582545	50587426	+	80	4881	"intron (NM_033119, intron 3 of 9)"	"intron (NM_033119, intron 3 of 9)"	2744	NM_033119	85407	Hs.187578	NM_033119	ENSG00000140807	NKD1	Naked1	naked cuticle homolog 1	protein-coding	80.01	16.5	4.849090909	6.93E-23
chr16-790	chr16	11503466	11504466	+	16.6	1000	Intergenic	AluJo|SINE|Alu	-55150	NR_110907	101927131	Hs.569654	NR_110907	ENSG00000262999	LOC101927131	-	uncharacterized LOC101927131	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr16-792	chr16	13379419	13380690	+	20.5	1271	Intergenic	MER4A1|LTR|ERV1	384577	NM_001145204	729993	Hs.130661	NM_001145204	ENSG00000237515	SHISA9	CKAMP44	shisa family member 9	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr16-796	chr16	17750881	17751881	+	16.6	1000	Intergenic	Intergenic	-186643	NM_022166	64131	Hs.22907	NM_022166	ENSG00000103489	XYLT1	DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I	xylosyltransferase 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr16-797	chr16	21578580	21579580	+	16	1000	Intergenic	AluSz|SINE|Alu	-29462	NM_001288659	51108	Hs.279583	NM_016025	ENSG00000197006	METTL9	CGI-81|DREV|DREV1|PAP1	methyltransferase like 9	protein-coding	16	3.4	4.705882353	2.25E-05
chr16-806	chr16	27094757	27095757	+	15.4	1000	Intergenic	Intergenic	17038	NM_001145545	162083	Hs.120831	NM_182831	ENSG00000234186	C16orf82	TNT	chromosome 16 open reading frame 82	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr16-811	chr16	49058209	49059604	+	22.4	1395	Intergenic	Intergenic	256836	NM_004352	869	Hs.458423	NM_004352	ENSG00000102924	CBLN1	-	cerebellin 1 precursor	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr16-813	chr16	49716173	49717687	+	24.3	1514	"intron (NM_001271620, intron 3 of 7)"	"intron (NM_001271620, intron 3 of 7)"	-18788	NM_001330533	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	24.32	4.37	5.565217391	4.38E-09
chr16-815	chr16	49788984	49791246	+	32	2262	"intron (NM_001271620, intron 2 of 7)"	"intron (NM_001271620, intron 2 of 7)"	66534	NM_015069	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	32	4.85	6.597938144	5.03E-13
chr16-816	chr16	49859961	49863599	+	55.7	3638	"intron (NM_001271620, intron 1 of 7)"	AluJr|SINE|Alu	-5131	NM_015069	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	55.69	8.74	6.371853547	1.56E-20
chr16-818	chr16	49882487	49883487	+	17.3	1000	"intron (NM_001271620, intron 1 of 7)"	"intron (NM_001271620, intron 1 of 7)"	8843	NM_001271620	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr16-819	chr16	49932776	49934046	+	19.2	1270	Intergenic	L2c|LINE|L2	-41581	NM_001271620	23090	Hs.443715	NM_015069	ENSG00000102935	ZNF423	Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ	zinc finger protein 423	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr16-82	chr16	79634778	79636029	+	28.8	1251	promoter-TSS (NM_005360)	promoter-TSS (NM_005360)	-781	NM_001031804	4094	Hs.134859	NM_005360	ENSG00000178573	MAF	AYGRP|CCA4|CTRCT21|c-MAF	MAF bZIP transcription factor	protein-coding	28.8	2.91	9.896907216	7.24E-15
chr16-827	chr16	51149407	51150407	+	16.6	1000	Intergenic	(CTG)n|Simple_repeat|Simple_repeat	34601	NM_001127892	6299	Hs.135787	NM_002968	ENSG00000103449	SALL1	HEL-S-89|HSAL1|Sal-1|TBS|ZNF794	spalt like transcription factor 1	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr16-838	chr16	57313803	57314803	+	17.3	1000	"intron (NM_015993, intron 1 of 3)"	MIRb|SINE|MIR	4281	NM_015993	51090	Hs.632215	NM_015993	ENSG00000102934	PLLP	PMLP|TM4SF11	plasmolipin	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr16-843	chr16	57812064	57813064	+	16.6	1000	"intron (NM_001318714, intron 3 of 20)"	L1MB3|LINE|L1	-3544	NM_001318712	3801	Hs.23131	NM_005550	ENSG00000140859	KIFC3	-	kinesin family member C3	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr16-844	chr16	57992816	57995016	+	38.4	2200	"exon (NM_001135639, exon 10 of 13)"	"exon (NM_001135639, exon 10 of 13)"	11104	NM_001135639	1258	Hs.147062	NM_001297	ENSG00000070729	CNGB1	CNCG2|CNCG3L|CNCG4|CNG4|CNGB1B|GAR1|GARP|GARP2|RCNC2|RCNCb|RCNCbeta|RP45	cyclic nucleotide gated channel beta 1	protein-coding	38.4	1.94	19.79381443	2.32E-28
chr16-85	chr16	88705707	88707349	+	36.5	1642	"3' UTR (NM_013278, exon 3 of 3)"	"3' UTR (NM_013278, exon 3 of 3)"	1527	NM_013278	27189	Hs.278911	NM_013278	ENSG00000124391	IL17C	CX2|IL-17C	interleukin 17C	protein-coding	36.48	6.8	5.364705882	3.95E-12
chr16-850	chr16	66107027	66108027	+	17.3	1000	Intergenic	L1MC2|LINE|L1	-292983	NM_001795	1003	Hs.76206	NM_001795	ENSG00000179776	CDH5	7B4|CD144	cadherin 5	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr16-852	chr16	66300368	66301731	+	22.4	1363	Intergenic	Intergenic	-99461	NM_001795	1003	Hs.76206	NM_001795	ENSG00000179776	CDH5	7B4|CD144	cadherin 5	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr16-854	chr16	66371390	66372777	+	23	1387	Intergenic	LTR16A|LTR|ERVL	-28427	NM_001795	1003	Hs.76206	NM_001795	ENSG00000179776	CDH5	7B4|CD144	cadherin 5	protein-coding	23.04	5.34	4.314606742	4.49E-07
chr16-855	chr16	66727014	66729079	+	33.9	2065	"intron (NM_178818, intron 1 of 4)"	"intron (NM_178818, intron 1 of 4)"	2564	NM_181521	146223	Hs.643961	NM_178818	ENSG00000183723	CMTM4	CKLFSF4	CKLF like MARVEL transmembrane domain containing 4	protein-coding	33.92	4.85	6.993814433	7.28E-14
chr16-860	chr16	67045812	67047899	+	33.3	2087	Intergenic	AluJr|SINE|Alu	12439	NM_001190201	283848	Hs.346947	NM_173815	ENSG00000172824	CES4A	CES6|CES8	carboxylesterase 4A	protein-coding	33.28	4.85	6.86185567	7.28E-14
chr16-864	chr16	67457631	67460026	+	34.6	2395	Intergenic	Intergenic	-6208	NM_000196	3291	Hs.1376	NM_000196	ENSG00000176387	HSD11B2	AME|AME1|HSD11K|HSD2|SDR9C3	hydroxysteroid 11-beta dehydrogenase 2	protein-coding	34.56	4.37	7.908466819	8.51E-16
chr16-865	chr16	71223813	71224813	+	17.9	1000	"intron (NM_001198543, intron 1 of 18)"	L1MC5|LINE|L1	40312	NM_001198542	54768	Hs.351914	NM_017558	ENSG00000157423	HYDIN	CILD5|HYDIN1|HYDIN2|PPP1R31	"HYDIN, axonemal central pair apparatus protein"	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr16-866	chr16	71396987	71398757	+	31.4	1770	"intron (NR_027910, intron 1 of 9)"	MamRep4096|DNA|hAT?	5256	NM_001740	794	Hs.106857	NM_001740	ENSG00000172137	CALB2	CAB29|CAL2|CR	calbindin 2	protein-coding	31.36	3.4	9.223529412	1.89E-15
chr16-867	chr16	71412252	71413252	+	17.3	1000	"intron (NR_027910, intron 4 of 9)"	"intron (NR_027910, intron 4 of 9)"	20136	NM_001740	794	Hs.106857	NM_001740	ENSG00000172137	CALB2	CAB29|CAL2|CR	calbindin 2	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr16-869	chr16	73583882	73584882	+	16.6	1000	Intergenic	Intergenic	163678	NR_038234	100506172	Hs.434230	NR_038234	ENSG00000258779	LINC01568	-	long intergenic non-protein coding RNA 1568	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr16-870	chr16	74303679	74304679	+	16.6	1000	Intergenic	Intergenic	-26494	NM_002811	5713	Hs.440604	NM_002811	ENSG00000103035	PSMD7	MOV34|P40|Rpn8|S12	"proteasome 26S subunit, non-ATPase 7"	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr16-878	chr16	80596979	80597979	+	16.6	1000	promoter-TSS (NR_120307)	promoter-TSS (NR_120307)	-447	NR_120307	102724084	Hs.147884	NR_120307		LOC102724084	-	uncharacterized LOC102724084	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr16-879	chr16	81242100	81243100	+	16.6	1000	"intron (NM_001076780, intron 3 of 17)"	MER5A|DNA|hAT-Charlie	11375	NM_052892	114780	Hs.413525	NM_052892	ENSG00000166473	PKD1L2	PC1L2	polycystin 1 like 2 (gene/pseudogene)	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr16-880	chr16	82018725	82019725	+	14.7	1000	Intergenic	L1ME3C|LINE|L1	25868	NM_145168	93517	Hs.87779	NM_145168	ENSG00000184860	SDR42E1	HSPC105	"short chain dehydrogenase/reductase family 42E, member 1"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr16-881	chr16	82550879	82552131	+	19.8	1252	Intergenic	Intergenic	-108894	NM_001220490	1012	Hs.654386	NM_001257	ENSG00000140945	CDH13	CDHH|P105	cadherin 13	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr16-882	chr16	82958899	82959899	+	17.3	1000	"intron (NM_001220490, intron 2 of 12)"	"intron (NM_001220490, intron 2 of 12)"	64504	NR_110937	101928417	Hs.569538	NR_110937	ENSG00000260832	LOC101928417	-	uncharacterized LOC101928417	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr16-887	chr16	84193720	84194720	+	16.6	1000	"intron (NM_178452, intron 6 of 11)"	"intron (NM_178452, intron 6 of 11)"	1575	NM_001318756	123872	Hs.310164	NM_178452	ENSG00000154099	DNAAF1	CILD13|LRRC50|ODA7|swt	dynein axonemal assembly factor 1	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr16-890	chr16	84715508	84716508	+	15.4	1000	Intergenic	AluJr|SINE|Alu	-17547	NR_073577	9100	Hs.136778	NM_005153	ENSG00000103194	USP10	UBPO	ubiquitin specific peptidase 10	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr16-895	chr16	84948157	84949414	+	19.8	1257	Intergenic	AluY|SINE|Alu	95198	NM_031476	83716	Hs.513779	NM_031476	ENSG00000103196	CRISPLD2	CRISP11|LCRISP2|LGL1	cysteine rich secretory protein LCCL domain containing 2	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr16-896	chr16	85082154	85083154	+	15.4	1000	"intron (NM_001286566, intron 1 of 11)"	"intron (NM_001286566, intron 1 of 11)"	-14164	NM_001286565	9764	Hs.301658	NM_014732	ENSG00000135709	KIAA0513	-	KIAA0513	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr16-898	chr16	85108396	85109836	+	21.8	1440	"intron (NM_001286565, intron 4 of 12)"	"intron (NM_001286565, intron 4 of 12)"	12298	NM_001286565	9764	Hs.301658	NM_014732	ENSG00000135709	KIAA0513	-	KIAA0513	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr16-905	chr16	85276051	85277051	+	16.6	1000	Intergenic	AluJr|SINE|Alu	-40013	NR_038859	197196	Hs.679002	NM_153238	ENSG00000179219	LINC00311	NCRNA00311|TMEM148	long intergenic non-protein coding RNA 311	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr16-909	chr16	85374117	85378045	+	82.6	3928	Intergenic	Intergenic	-36150	NR_049816	100847022		NR_049816	ENSG00000266307	MIR5093	-	microRNA 5093	ncRNA	82.57	10.68	7.731273408	1.96E-34
chr16-919	chr16	86014624	86017187	+	40.3	2563	Intergenic	Intergenic	63952	NR_106832	102466732		NR_106832	ENSG00000274134	MIR6774	hsa-mir-6774	microRNA 6774	ncRNA	40.33	4.85	8.315463918	2.73E-18
chr16-923	chr16	86358545	86359545	+	16	1000	Intergenic	Intergenic	20240	NR_024406	732275	Hs.558087	NR_024406	ENSG00000168367	LINC00917	-	long intergenic non-protein coding RNA 917	ncRNA	16	0.97	16.49484536	3.54E-11
chr16-924	chr16	86399005	86403518	+	62.1	4513	Intergenic	Intergenic	-21976	NR_024406	732275	Hs.558087	NR_024406	ENSG00000168367	LINC00917	-	long intergenic non-protein coding RNA 917	ncRNA	62.09	11.16	5.563620072	2.24E-20
chr16-928	chr16	86440781	86442047	+	17.9	1266	Intergenic	MLT1N2|LTR|ERVL-MaLR	-62129	NR_024406	732275	Hs.558087	NR_024406	ENSG00000168367	LINC00917	-	long intergenic non-protein coding RNA 917	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr16-93	chr16	85386219	85387477	+	27.5	1258	Intergenic	MLT1E1|LTR|ERVL-MaLR	-46917	NR_049816	100847022		NR_049816	ENSG00000266307	MIR5093	-	microRNA 5093	ncRNA	27.52	1.94	14.18556701	2.90E-17
chr16-937	chr16	87463009	87465102	+	33.3	2093	"intron (NM_015144, intron 3 of 12)"	L1MD|LINE|L1	38254	NM_022818	81631	Hs.356061	NM_022818	ENSG00000140941	MAP1LC3B	ATG8F|LC3B|MAP1A/1BLC3|MAP1LC3B-a	microtubule associated protein 1 light chain 3 beta	protein-coding	33.28	4.85	6.86185567	7.28E-14
chr16-940	chr16	87470936	87473954	+	45.4	3018	"intron (NM_015144, intron 2 of 12)"	"intron (NM_015144, intron 2 of 12)"	46644	NM_022818	81631	Hs.356061	NM_022818	ENSG00000140941	MAP1LC3B	ATG8F|LC3B|MAP1A/1BLC3|MAP1LC3B-a	microtubule associated protein 1 light chain 3 beta	protein-coding	45.45	6.8	6.683823529	1.33E-17
chr16-949	chr16	1086871	1089037	+	34.6	2166	Intergenic	MLT1F|LTR|ERVL-MaLR	-34802	NM_001172560	6755	Hs.449840	NM_001053	ENSG00000162009	SSTR5	SS-5-R	somatostatin receptor 5	protein-coding	34.56	5.82	5.93814433	6.75E-13
chr16-953	chr16	1481130	1482130	+	16.6	1000	Intergenic	Intergenic	-10829	NM_001272051	283951	Hs.58373	NM_001010878	ENSG00000174109	C16orf91	CCSMST1|URLC5|gs103	chromosome 16 open reading frame 91	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr16-955	chr16	1938375	1939375	+	16.6	1000	Intergenic	AluSx|SINE|Alu	-4643	NR_033914	64735	Hs.662737	NR_033914	ENSG00000281219	LINC00254	C16orf32|NCRNA00254	long intergenic non-protein coding RNA 254	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr16-958	chr16	2330246	2332596	+	32.6	2350	"exon (NM_001089, exon 27 of 33)"	"exon (NM_001089, exon 27 of 33)"	6800	NR_039868	100616241		NR_039868	ENSG00000264004	MIR4717	-	microRNA 4717	ncRNA	32.64	6.8	4.8	5.32E-10
chr16-960	chr16	2448220	2449220	+	16.6	1000	"intron (NR_003574, intron 9 of 16)"	MER21A|LTR|ERVL	-30672	NM_001323538	899	Hs.1973	NM_001761	ENSG00000162063	CCNF	FBX1|FBXO1	cyclin F	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr16-961	chr16	2864814	2866156	+	21.1	1342	Intergenic	Intergenic	-1679	NM_001270452	10942	Hs.72026	NM_006799	ENSG00000007038	PRSS21	ESP-1|ESP1|TEST1|TESTISIN	"protease, serine 21"	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr16-962	chr16	2869375	2871205	+	30.1	1830	"intron (NM_001270452, intron 4 of 5)"	MIR|SINE|MIR	3126	NM_144957	10942	Hs.72026	NM_006799	ENSG00000007038	PRSS21	ESP-1|ESP1|TEST1|TESTISIN	"protease, serine 21"	protein-coding	30.08	2.91	10.33676976	7.13E-16
chr16-964	chr16	3042795	3043795	+	15.4	1000	"non-coding (NR_033861, exon 5 of 5)"	"non-coding (NR_033861, exon 5 of 5)"	4240	NR_033861	283875	Hs.620489	NR_033861		LINC00514	LA16c-380H5.1	long intergenic non-protein coding RNA 514	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr16-967	chr16	3054664	3056745	+	31.4	2081	Intergenic	AluSp|SINE|Alu	6748	NR_110948	101929613	Hs.741644	NR_110947		LOC101929613	LA16c-380H5.3	uncharacterized LOC101929613	ncRNA	31.36	3.88	8.082474227	3.25E-14
chr16-976	chr16	3290695	3292021	+	17.9	1326	TTS (NM_000243)	TTS (NM_000243)	-5901	NM_001145446	7752	Hs.632222	NM_003454	ENSG00000010539	ZNF200	-	zinc finger protein 200	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr16-979	chr16	4039016	4040016	+	16	1000	"intron (NM_001116, intron 5 of 10)"	AluSx1|SINE|Alu	-39071	NR_120311	102724927	Hs.364739	NR_120311	ENSG00000262185	LOC102724927	-	uncharacterized LOC102724927	ncRNA	16	0.97	16.49484536	3.54E-11
chr16-980	chr16	4153495	4157571	+	53.8	4076	"intron (NM_001116, intron 2 of 10)"	AluSz6|SINE|Alu	10653	NM_001116	115	Hs.391860	NM_001116	ENSG00000162104	ADCY9	AC9|ACIX	adenylate cyclase 9	protein-coding	53.77	8.74	6.152173913	9.88E-20
chr16-983	chr16	4226550	4227550	+	16	1000	Intergenic	Intergenic	-60864	NM_001116	115	Hs.391860	NM_001116	ENSG00000162104	ADCY9	AC9|ACIX	adenylate cyclase 9	protein-coding	16	2.91	5.498281787	4.98E-06
chr16-988	chr16	5044623	5045623	+	16.6	1000	"intron (NM_014692, intron 6 of 15)"	"intron (NM_014692, intron 6 of 15)"	36805	NM_014692	9717	Hs.512856	NM_014692	ENSG00000103184	SEC14L5	PRELID4B	SEC14 like lipid binding 5	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr16-990	chr16	5522055	5523055	+	15.4	1000	Intergenic	Intergenic	143696	NR_110902	101926950	Hs.613285	NR_110902	ENSG00000260338	LINC01570	-	long intergenic non-protein coding RNA 1570	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr16-992	chr16	7320448	7321448	+	16.6	1000	"intron (NM_018723, intron 4 of 15)"	"intron (NM_018723, intron 4 of 15)"	-61803	NM_145891	54715	Hs.459842	NM_018723	ENSG00000078328	RBFOX1	2BP1|A2BP1|FOX-1|FOX1|HRNBP1	"RNA binding protein, fox-1 homolog 1"	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr17_gl000204_random-1	chr17_gl000204_random	73081	77597	+	68.5	4516	NA	L1ME4a|LINE|L1	NA	NA									68.49	10.19	6.721295388	5.43E-26
chr17_gl000204_random-4	chr17_gl000204_random	59664	62197	+	38.4	2533	NA	HAL1|LINE|L1	NA	NA									38.4	2.43	15.80246914	1.30E-25
chr17-1001	chr17	26168939	26170267	+	21.8	1328	Intergenic	AluJr|SINE|Alu	-42048	NM_000625	4843	Hs.709191	NM_000625	ENSG00000007171	NOS2	HEP-NOS|INOS|NOS|NOS2A	nitric oxide synthase 2	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr17-1003	chr17	26750418	26751418	+	17.3	1000	Intergenic	AluSz|SINE|Alu	-17688	NM_001242366	113235	Hs.446689	NM_080669	ENSG00000076351	SLC46A1	G21|HCP1|PCFT	solute carrier family 46 member 1	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr17-1007	chr17	31258481	31259481	+	17.3	1000	"intron (NM_015544, intron 3 of 7)"	"intron (NM_015544, intron 3 of 7)"	4053	NM_001033504	26022	Hs.3447	NM_015544	ENSG00000006042	TMEM98	TADA1	transmembrane protein 98	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr17-1009	chr17	32905325	32908115	+	58.9	2790	promoter-TSS (NM_207454)	promoter-TSS (NM_207454)	-332	NM_207454	400591	Hs.514090	NM_207454		C17orf102	-	chromosome 17 open reading frame 102	protein-coding	58.89	6.31	9.332805071	1.08E-28
chr17-1015	chr17	34391971	34392971	+	17.9	1000	"intron (NM_002988, intron 1 of 2)"	"intron (NM_002988, intron 1 of 2)"	839	NM_002988	6362	Hs.143961	NM_002988	ENSG00000275385	CCL18	AMAC-1|AMAC1|CKb7|DC-CK1|DCCK1|MIP-4|PARC|SCYA18	C-C motif chemokine ligand 18	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr17-1020	chr17	36109197	36110523	+	19.8	1326	Intergenic	L1ME3A|LINE|L1	-4791	NM_001165923	6928	Hs.191144	NM_000458	ENSG00000275410	HNF1B	FJHN|HNF-1-beta|HNF-1B|HNF1beta|HNF2|HPC11|LF-B3|LFB3|MODY5|TCF-2|TCF2|VHNF1	HNF1 homeobox B	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr17-1030	chr17	38599065	38600953	+	41	1888	"exon (NM_001552, exon 1 of 4)"	"exon (NM_001552, exon 1 of 4)"	333	NM_001552	3487	Hs.462998	NM_001552	ENSG00000141753	IGFBP4	BP-4|HT29-IGFBP|IBP4|IGFBP-4	insulin like growth factor binding protein 4	protein-coding	40.97	5.34	7.672284644	4.72E-18
chr17-1034	chr17	39585463	39586463	+	17.3	1000	Intergenic	Intergenic	-5141	NM_003770	8688	Hs.673852	NM_003770	ENSG00000108417	KRT37	HA7|K37|KRTHA7	keratin 37	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr17-1035	chr17	39663718	39664718	+	17.3	1000	Intergenic	Intergenic	-2353	NM_153490	3860	Hs.654550	NM_002274	ENSG00000171401	KRT13	CK13|K13|WSN2	keratin 13	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr17-1046	chr17	42632155	42633155	+	17.9	1000	Intergenic	Intergenic	-2157	NM_001466	2535	Hs.142912	NM_001466	ENSG00000180340	FZD2	Fz2|fz-2|fzE2|hFz2	frizzled class receptor 2	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr17-1050	chr17	46579072	46580394	+	25	1322	Intergenic	Intergenic	28539	NM_002144	3211	Hs.99992	NM_002144	ENSG00000120094	HOXB1	HCFP3|HOX2|HOX2I|Hox-2.9	homeobox B1	protein-coding	24.96	4.37	5.711670481	4.38E-09
chr17-1055	chr17	46711509	46717798	+	110.7	6289	Intergenic	Intergenic	-4732	NR_029582	406972		NR_029582	ENSG00000210741	MIR196A1	MIRN196-1|MIRN196A1|mir-196a-1	microRNA 196a-1	ncRNA	110.73	23.78	4.656433978	6.11E-30
chr17-106	chr17	21246518	21248704	+	56.3	2186	Intergenic	Intergenic	-32088	NM_021012	3768	Hs.200629	NM_021012	ENSG00000184185	KCNJ12	IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x	potassium voltage-gated channel subfamily J member 12	protein-coding	56.33	11.65	4.835193133	8.28E-17
chr17-1072	chr17	48253384	48255024	+	26.2	1640	TTS (NR_135553)	TTS (NR_135553)	-4367	NR_024193	373861	Hs.25934	NM_194072		HILS1	H1.9	"histone linker H1 domain, spermatid-specific 1 (pseudogene)"	pseudo	26.24	5.82	4.508591065	7.99E-08
chr17-1074	chr17	48278211	48284202	+	76.8	5991	Intergenic	Intergenic	-2206	NM_000088	1277	Hs.172928	NM_000088	ENSG00000108821	COL1A1	EDSC|OI1|OI2|OI3|OI4	collagen type I alpha 1 chain	protein-coding	76.81	16.5	4.655151515	1.59E-21
chr17-1079	chr17	49008149	49010829	+	49.9	2680	Intergenic	Intergenic	-64150	NM_001243877	10140	Hs.703321	NM_005749	ENSG00000141232	TOB1	APRO5|APRO6|PIG49|TOB|TROB|TROB1	"transducer of ERBB2, 1"	protein-coding	49.93	7.77	6.425997426	4.59E-19
chr17-108	chr17	21323875	21325129	+	27.5	1254	Intergenic	MIRb|SINE|MIR	16054	NM_001194958	100134444	Hs.200629	NM_001194958	ENSG00000260458	KCNJ18	KIR2.6|TTPP2	potassium voltage-gated channel subfamily J member 18	protein-coding	27.52	5.82	4.728522337	1.71E-08
chr17-1083	chr17	54732566	54733954	+	19.2	1388	Intergenic	MLT1G3|LTR|ERVL-MaLR	62200	NM_005450	9241	Hs.248201	NM_005450	ENSG00000183691	NOG	SYM1|SYNS1|SYNS1A	noggin	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr17-1084	chr17	54755330	54756330	+	18.6	1000	Intergenic	Intergenic	84770	NM_005450	9241	Hs.248201	NM_005450	ENSG00000183691	NOG	SYM1|SYNS1|SYNS1A	noggin	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr17-1090	chr17	63361457	63362857	+	27.5	1400	Intergenic	Intergenic	-91502	NR_131984	105827617		NR_131984	ENSG00000263520	CRAT40	-	cervical cancer-associated transcript 40	ncRNA	27.52	5.82	4.728522337	1.71E-08
chr17-1091	chr17	63434948	63436470	+	27.5	1522	Intergenic	Intergenic	-17950	NR_131984	105827617		NR_131984	ENSG00000263520	CRAT40	-	cervical cancer-associated transcript 40	ncRNA	27.52	4.85	5.674226804	7.61E-10
chr17-1095	chr17	66669839	66671150	+	21.1	1311	"intron (NR_110825, intron 3 of 4)"	LTR82A|LTR|ERVL	46199	NR_110825	101928104	Hs.569826	NR_110825	ENSG00000267659	LINC01482	-	long intergenic non-protein coding RNA 1482	ncRNA	21.12	3.88	5.443298969	1.44E-07
chr17-1099	chr17	71512176	71513442	+	24.3	1266	"non-coding (NR_135635, exon 2 of 2)"	"non-coding (NR_135635, exon 2 of 2)"	2987	NR_135635	101928251	Hs.434726	NR_135635	ENSG00000264985	LOC101928251	-	uncharacterized LOC101928251	ncRNA	24.32	3.88	6.268041237	6.68E-10
chr17-1100	chr17	71519736	71525882	+	97.3	6146	"intron (NM_001144952, intron 1 of 44)"	(TG)n|Simple_repeat|Simple_repeat	12987	NR_135635	101928251	Hs.434726	NR_135635	ENSG00000264985	LOC101928251	-	uncharacterized LOC101928251	ncRNA	97.29	17.96	5.417037862	7.81E-31
chr17-1104	chr17	71629387	71631359	+	34.6	1972	"intron (NM_001144952, intron 1 of 44)"	"intron (NM_001144952, intron 1 of 44)"	9854	NM_001144952	54549	Hs.435719	NM_019064	ENSG00000069188	SDK2	-	sidekick cell adhesion molecule 2	protein-coding	34.56	4.85	7.125773196	1.02E-14
chr17-1106	chr17	71886413	71887413	+	17.3	1000	Intergenic	Intergenic	-62237	NR_027146	283982	Hs.464079	NM_182564		LINC00469	C17orf54	long intergenic non-protein coding RNA 469	ncRNA	17.28	2.43	7.111111111	1.14E-07
chr17-1111	chr17	72664241	72665499	+	22.4	1258	Intergenic	L1MCa|LINE|L1	-2386	NM_175738	326624	Hs.351413	NM_175738	ENSG00000172794	RAB37	-	"RAB37, member RAS oncogene family"	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr17-1115	chr17	74378644	74379968	+	21.8	1324	Intergenic	CpG	-1384	NM_021972	8877	Hs.68061	NM_021972	ENSG00000176170	SPHK1	SPHK	sphingosine kinase 1	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr17-1124	chr17	77143298	77144572	+	19.8	1274	"intron (NM_001082575, intron 4 of 14)"	"intron (NM_001082575, intron 4 of 14)"	72916	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr17-1127	chr17	77244275	77246763	+	42.2	2488	"intron (NM_001082575, intron 3 of 14)"	MER74A|LTR|ERVL	174500	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	42.25	4.85	8.711340206	3.69E-20
chr17-1130	chr17	77402335	77404753	+	48	2418	"intron (NM_001082575, intron 2 of 14)"	"intron (NM_001082575, intron 2 of 14)"	108686	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	48.01	5.82	8.249140893	1.93E-21
chr17-1134	chr17	77830294	77831294	+	16.6	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	-17581	NM_003655	8535	Hs.405046	NM_003655	ENSG00000141582	CBX4	NBP16|PC2	chromobox 4	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr17-1142	chr17	79358655	79363277	+	103.1	4622	Intergenic	CpG	-1806	NM_001272086	100130370	Hs.646594	NM_001272086		LOC100130370	-	uncharacterized LOC100130370	protein-coding	103.05	14.56	7.07760989	5.57E-40
chr17-1146	chr17	81071957	81073762	+	30.7	1805	Intergenic	Intergenic	35292	NM_001004431	284207	Hs.378821	NM_001004431	ENSG00000176845	METRNL	-	"meteorin like, glial cell differentiation regulator"	protein-coding	30.72	5.82	5.278350515	1.29E-10
chr17-1147	chr17	47646	49909	+	35.2	2263	Intergenic	Intergenic	-11735	NR_104420	100506371		NR_104420		LINC02091	-	long intergenic non-protein coding RNA 2091	ncRNA	35.2	4.37	8.054919908	8.51E-16
chr17-1148	chr17	129632	130632	+	16.6	1000	"intron (NM_001190413, intron 4 of 7)"	"intron (NM_001190413, intron 4 of 7)"	-50864	NM_001242780	100506388	Hs.627744	NM_001242780	ENSG00000262061	LOC100506388	-	uncharacterized LOC100506388	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr17-115	chr17	36905025	36907286	+	51.8	2261	Intergenic	CpG-10518	-1597	NM_007144	7703	Hs.371617	NM_007144	ENSG00000277258	PCGF2	MEL-18|RNF110|ZNF144	polycomb group ring finger 2	protein-coding	51.85	5.82	8.908934708	3.04E-24
chr17-1154	chr17	1812910	1813910	+	17.9	1000	Intergenic	Intergenic	80137	NM_002945	6117	Hs.461925	NM_002945	ENSG00000132383	RPA1	HSSB|MST075|REPA1|RF-A|RP-A|RPA70	replication protein A1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr17-1159	chr17	5835638	5836638	+	17.3	1000	Intergenic	Intergenic	-137796	NM_015253	23302	Hs.370166	NM_015253	ENSG00000179314	WSCD1	-	WSC domain containing 1	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr17-1161	chr17	5930986	5931986	+	17.9	1000	Intergenic	Intergenic	-42448	NM_015253	23302	Hs.370166	NM_015253	ENSG00000179314	WSCD1	-	WSC domain containing 1	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr17-1162	chr17	5980646	5983223	+	35.8	2577	"intron (NM_015253, intron 1 of 8)"	L2c|LINE|L2	8000	NM_015253	23302	Hs.370166	NM_015253	ENSG00000179314	WSCD1	-	WSC domain containing 1	protein-coding	35.84	7.77	4.612612613	8.02E-11
chr17-1163	chr17	6056184	6057184	+	17.3	1000	Intergenic	MER20|DNA|hAT-Charlie	82750	NM_015253	23302	Hs.370166	NM_015253	ENSG00000179314	WSCD1	-	WSC domain containing 1	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr17-1166	chr17	7341458	7344651	+	54.4	3193	"exon (NM_004112, exon 1 of 5)"	"exon (NM_004112, exon 1 of 5)"	708	NM_004112	2256	Hs.655193	NM_004112	ENSG00000161958	FGF11	FGF-11|FHF-3|FHF3	fibroblast growth factor 11	protein-coding	54.41	4.37	12.45080092	6.23E-31
chr17-1168	chr17	7533814	7534814	+	17.3	1000	"intron (NM_001289114, intron 3 of 7)"	MIRb|SINE|MIR	902	NM_001040	6462	Hs.632235	NM_001040	ENSG00000129214	SHBG	ABP|SBP|TEBG	sex hormone binding globulin	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr17-1170	chr17	7619067	7621291	+	37.1	2224	promoter-TSS (NM_001303270)	promoter-TSS (NM_001303270)	-493	NM_020877	146754	Hs.367649	NM_020877	ENSG00000183914	DNAH2	DNAHC2|DNHD3	dynein axonemal heavy chain 2	protein-coding	37.12	6.31	5.882725832	1.20E-13
chr17-1173	chr17	7887738	7888738	+	16.6	1000	Intergenic	AluSx|SINE|Alu	-17750	NM_000180	3000	Hs.592109	NM_000180	ENSG00000132518	GUCY2D	CORD5|CORD6|CYGD|GUC1A4|GUC2D|LCA|LCA1|RCD2|RETGC-1|ROS-GC1|ROSGC|retGC	"guanylate cyclase 2D, retinal"	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr17-1180	chr17	10993837	10995506	+	28.2	1669	Intergenic	Intergenic	-150069	NM_207386	388336	Hs.592124	NM_175903	ENSG00000188803	SHISA6	-	shisa family member 6	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr17-1186	chr17	16394128	16395128	+	14.7	1000	"intron (NM_207387, intron 1 of 2)"	"intron (NM_207387, intron 1 of 2)"	877	NM_001113567	388341	Hs.25425	NM_207387	ENSG00000181350	LRRC75A	C17orf76|FAM211A	leucine rich repeat containing 75A	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr17-1190	chr17	19401364	19405073	+	58.9	3709	Intergenic	Intergenic	-33949	NM_018242	55244	Hs.232054	NM_018242	ENSG00000142494	SLC47A1	MATE1	solute carrier family 47 member 1	protein-coding	58.89	13.59	4.333333333	9.00E-16
chr17-1192	chr17	19492481	19493745	+	19.8	1264	Intergenic	Intergenic	32240	NR_003025	677885	Hs.658450	NR_003025	ENSG00000239149	SNORA59A	ACA59	"small nucleolar RNA, H/ACA box 59A"	snoRNA	19.84	1.94	10.22680412	9.57E-11
chr17-1193	chr17	19550304	19553443	+	58.9	3139	promoter-TSS (NM_000382)	promoter-TSS (NM_000382)	-191	NM_000382	224	Hs.499886	NM_000382	ENSG00000072210	ALDH3A2	ALDH10|FALDH|SLS	aldehyde dehydrogenase 3 family member A2	protein-coding	58.89	6.8	8.660294118	2.26E-27
chr17-1195	chr17	19575924	19576924	+	17.3	1000	"intron (NM_000382, intron 9 of 9)"	"intron (NM_000382, intron 9 of 9)"	24360	NM_001031806	224	Hs.499886	NM_000382	ENSG00000072210	ALDH3A2	ALDH10|FALDH|SLS	aldehyde dehydrogenase 3 family member A2	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr17-1196	chr17	19605937	19606937	+	16.6	1000	"exon (NM_001099646, exon 12 of 17)"	"exon (NM_001099646, exon 12 of 17)"	13606	NR_135625	146802	Hs.126830	NM_152908	ENSG00000180638	SLC47A2	MATE2|MATE2-B|MATE2-K|MATE2K	solute carrier family 47 member 2	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr17-1197	chr17	19687822	19688822	+	16.6	1000	"intron (NM_014683, intron 21 of 26)"	"intron (NM_014683, intron 21 of 26)"	-36576	NM_000691	218	Hs.531682	NM_000691	ENSG00000108602	ALDH3A1	ALDH3|ALDHIII	aldehyde dehydrogenase 3 family member A1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr17-1202	chr17	25703472	25704472	+	16.6	1000	Intergenic	AluJb|SINE|Alu	-41059	NR_033892	440419	Hs.385755	NR_033892	ENSG00000266433	TBC1D3P5	-	TBC1 domain family member 3 pseudogene 5	pseudo	16.64	2.91	5.718213058	8.60E-07
chr17-1203	chr17	25813179	25814179	+	17.3	1000	"intron (NM_014238, intron 2 of 20)"	"intron (NM_014238, intron 2 of 20)"	14643	NM_014238	8844	Hs.133534	NM_014238	ENSG00000141068	KSR1	KSR|RSU2	kinase suppressor of ras 1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr17-1207	chr17	26119466	26121989	+	42.2	2523	"intron (NM_000625, intron 2 of 26)"	CpG	6828	NM_000625	4843	Hs.709191	NM_000625	ENSG00000007171	NOS2	HEP-NOS|INOS|NOS|NOS2A	nitric oxide synthase 2	protein-coding	42.25	2.91	14.51890034	7.64E-27
chr17-1210	chr17	26788662	26789662	+	16	1000	Intergenic	Intergenic	-11502	NM_001346683	9058	Hs.102307	NM_003984	ENSG00000007216	SLC13A2	NADC1|NaCT|NaDC-1|SDCT1	solute carrier family 13 member 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-1216	chr17	29901194	29902795	+	24.3	1601	promoter-TSS (NR_039878)	promoter-TSS (NR_039878)	-294	NR_039878	100616449		NR_039878	ENSG00000265976	MIR4725	mir-4725	microRNA 4725	ncRNA	24.32	2.91	8.357388316	5.77E-12
chr17-1219	chr17	31855321	31856321	+	16.6	1000	TTS (NR_037584)	TTS (NR_037584)	4958	NR_037584	100506677	Hs.652571	NR_037584	ENSG00000265544	AA06	AA02|AA04|AA05	uncharacterized LOC100506677	pseudo	16.64	2.91	5.718213058	8.60E-07
chr17-1223	chr17	34119803	34124091	+	73.6	4288	"intron (NM_024302, intron 1 of 7)"	"intron (NM_024302, intron 1 of 7)"	764	NM_024302	79148	Hs.380710	NM_024302	ENSG00000271447	MMP28	EPILYSIN|MM28|MMP-25|MMP-28|MMP25	matrix metallopeptidase 28	protein-coding	73.61	16.5	4.461212121	1.55E-19
chr17-1227	chr17	34436914	34438172	+	19.2	1258	Intergenic	Intergenic	6323	NM_002984	6351	Hs.75703	NM_002984	ENSG00000275302	CCL4	ACT2|AT744.1|G-26|HC21|LAG-1|LAG1|MIP-1-beta|MIP1B|MIP1B1|SCYA2|SCYA4	C-C motif chemokine ligand 4	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr17-1229	chr17	35148309	35149309	+	16	1000	Intergenic	Intergenic	145151	NR_135669	102723471	Hs.567930	NR_135668	ENSG00000277268	LOC102723471	-	uncharacterized LOC102723471	ncRNA	16	3.88	4.12371134	7.91E-05
chr17-1232	chr17	35298252	35299252	+	16	1000	"intron (NM_005568, intron 3 of 4)"	CpG-10485	3980	NM_005568	3975	Hs.443727	NM_005568	ENSG00000273706	LHX1	LIM-1|LIM1	LIM homeobox 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr17-1235	chr17	36174214	36175214	+	17.3	1000	Intergenic	Intergenic	-69645	NM_001165923	6928	Hs.191144	NM_000458	ENSG00000275410	HNF1B	FJHN|HNF-1-beta|HNF-1B|HNF1beta|HNF2|HPC11|LF-B3|LFB3|MODY5|TCF-2|TCF2|VHNF1	HNF1 homeobox B	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr17-1243	chr17	39333880	39334880	+	17.9	1000	promoter-TSS (NM_033062)	promoter-TSS (NM_033062)	80	NM_033062	85291	Hs.380165	NM_033062	ENSG00000244537	KRTAP4-2	KAP4.2|KRTAP4.2	keratin associated protein 4-2	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr17-1249	chr17	39890531	39892525	+	35.2	1994	promoter-TSS (NM_177977)	promoter-TSS (NM_177977)	-630	NM_001079870	9001	Hs.158300	NM_003949	ENSG00000173805	HAP1	HAP2|HIP5|HLP|hHLP1	huntingtin associated protein 1	protein-coding	35.2	1.46	24.10958904	9.94E-28
chr17-125	chr17	74953520	74955040	+	31.4	1520	"intron (NR_136417, intron 2 of 2)"	"intron (NR_136417, intron 2 of 2)"	11001	NR_136417	105371899	Hs.634683	NR_136416	ENSG00000267568	LOC105371899	-	uncharacterized LOC105371899	ncRNA	31.36	2.43	12.90534979	1.22E-18
chr17-1252	chr17	41737128	41738975	+	34.6	1847	"intron (NM_001040002, intron 2 of 3)"	"intron (NM_001040002, intron 2 of 3)"	880	NM_013999	4222	Hs.438	NM_004527	ENSG00000005102	MEOX1	KFS2|MOX1	mesenchyme homeobox 1	protein-coding	34.56	5.34	6.471910112	9.27E-14
chr17-1255	chr17	41885959	41886959	+	17.3	1000	"intron (NM_001330233, intron 18 of 19)"	"intron (NM_001330233, intron 18 of 19)"	24088	NM_001932	4356	Hs.396566	NM_001932	ENSG00000161647	MPP3	DLG3	membrane palmitoylated protein 3	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr17-1257	chr17	41934439	41935698	+	19.2	1259	TTS (NM_001168324)	TTS (NM_001168324)	10552	NM_001168322	146894	Hs.147313	NM_145273	ENSG00000161649	CD300LG	CLM-9|CLM9|NEPMUCIN|TREM-4|TREM4	CD300 molecule like family member g	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr17-1261	chr17	42447893	42448893	+	17.3	1000	Intergenic	Intergenic	-7158	NM_198475	284069	Hs.154001	NM_198475	ENSG00000161682	FAM171A2	-	family with sequence similarity 171 member A2	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr17-1264	chr17	43045974	43048381	+	50.6	2407	Intergenic	Intergenic	-1533	NM_006688	10882	Hs.134012	NM_006688	ENSG00000131094	C1QL1	C1QRF|C1QTNF14|CRF	complement C1q like 1	protein-coding	50.57	5.82	8.689003436	2.68E-23
chr17-1269	chr17	45330533	45332700	+	35.8	2167	"intron (NM_000212, intron 1 of 14)"	CpG	408	NM_000212	3690	Hs.218040	NM_000212	ENSG00000259207	ITGB3	BDPLT16|BDPLT2|CD61|GP3A|GPIIIa|GT	integrin subunit beta 3	protein-coding	35.84	3.88	9.237113402	5.49E-18
chr17-1276	chr17	46619104	46622274	+	57	3170	"exon (NM_002145, exon 2 of 2)"	"exon (NM_002145, exon 2 of 2)"	-1024	NR_102279	100874362	Hs.171806	NR_102279	ENSG00000230148	HOXB-AS1	-	HOXB cluster antisense RNA 1	ncRNA	56.97	8.74	6.518306636	2.41E-21
chr17-128	chr17	77785003	77786787	+	44.2	1784	Intergenic	CpG	-14980	NM_020649	57332	Hs.387258	NM_020649	ENSG00000141570	CBX8	PC3|RC1	chromobox 8	protein-coding	44.17	5.34	8.271535581	7.25E-20
chr17-1280	chr17	46808894	46816104	+	113.3	7210	Intergenic	Intergenic	-6388	NM_006361	10481	Hs.66731	NM_006361	ENSG00000159184	HOXB13	PSGD	homeobox B13	protein-coding	113.29	18.44	6.143709328	3.22E-39
chr17-1284	chr17	47152894	47154399	+	23.7	1505	Intergenic	MER41-int|LTR|ERV1	-56176	NM_001159388	124872	Hs.374679	NM_153446	ENSG00000167080	B4GALNT2	B4GALT|GALGT2	"beta-1,4-N-acetyl-galactosaminyltransferase 2"	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr17-1287	chr17	47507091	47508091	+	16.6	1000	Intergenic	L1ME2|LINE|L1	-15324	NM_002634	5245	Hs.514303	NM_002634	ENSG00000167085	PHB	HEL-215|HEL-S-54e|PHB1	prohibitin	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr17-1297	chr17	48054989	48055989	+	17.3	1000	Intergenic	Intergenic	5359	NM_001934	1748	Hs.591167	NM_001934	ENSG00000108813	DLX4	BP1|DLX7|DLX8|DLX9|OFC15	distal-less homeobox 4	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr17-1299	chr17	48082186	48083186	+	17.9	1000	Intergenic	L1MC4a|LINE|L1	-10098	NM_005220	1747	Hs.134194	NM_005220	ENSG00000064195	DLX3	AI4|TDO	distal-less homeobox 3	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr17-1304	chr17	48384878	48385878	+	17.3	1000	Intergenic	LTR78|LTR|ERV1	-20162	NR_125805	103752589	Hs.612913	NR_125805	ENSG00000251179	TMEM92-AS1	TCONS_00025237|lncRNA-508851	TMEM92 antisense RNA 1	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr17-1308	chr17	48681426	48682426	+	16.6	1000	"intron (NM_001256325, intron 22 of 35)"	"intron (NM_001256325, intron 22 of 35)"	-30292	NM_001144070	8714	Hs.463421	NM_003786	ENSG00000108846	ABCC3	ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2	ATP binding cassette subfamily C member 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr17-1309	chr17	48904732	48905732	+	17.9	1000	Intergenic	Intergenic	-6779	NM_001330341	124857	Hs.211475	NM_175575	ENSG00000173714	WFIKKN2	GASP-1|WFDC20B|WFIKKNRP|hGASP-1	"WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2"	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr17-1317	chr17	55893754	55894754	+	16.6	1000	Intergenic	Intergenic	33179	NM_016070	51649	Hs.5836	NM_016070	ENSG00000181610	MRPS23	CGI-138|HSPC329|MRP-S23	mitochondrial ribosomal protein S23	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr17-1321	chr17	56236081	56237081	+	17.3	1000	TTS (NR_002307)	TTS (NR_002307)	2261	NR_002307	55545	Hs.381329	NR_002307		MSX2P1	HPX5|HSHPX5|MSX2P	msh homeobox 2 pseudogene 1	pseudo	17.28	0.49	35.26530612	3.68E-16
chr17-1329	chr17	64741112	64742112	+	17.9	1000	"intron (NM_002737, intron 13 of 16)"	AluSx1|SINE|Alu	-41578	NR_030364	693219		NR_030364	ENSG00000207943	MIR634	MIRN634|hsa-mir-634	microRNA 634	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr17-1331	chr17	66055587	66056587	+	17.9	1000	Intergenic	Intergenic	24011	NM_001320611	3838	Hs.594238	NM_002266	ENSG00000182481	KPNA2	IPOA1|QIP2|RCH1|SRP1-alpha|SRP1alpha	karyopherin subunit alpha 2	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr17-1335	chr17	66146638	66147638	+	17.3	1000	Intergenic	Intergenic	-47663	NR_027283	440461	Hs.661522	NR_027283		LOC440461	-	Rho GTPase activating protein 27 pseudogene	pseudo	17.28	2.91	5.93814433	8.60E-07
chr17-1337	chr17	70162046	70163301	+	19.8	1255	Intergenic	Intergenic	45512	NM_000346	6662	Hs.647409	NM_000346	ENSG00000125398	SOX9	CMD1|CMPD1|SRA1|SRXX2|SRXY10	SRY-box 9	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr17-1339	chr17	71403845	71405375	+	21.1	1530	"intron (NM_001144952, intron 18 of 44)"	AluY|SINE|Alu	-96467	NM_012121	23580	Hs.3903	NM_012121	ENSG00000179604	CDC42EP4	BORG4|CEP4|KAIA1777	CDC42 effector protein 4	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr17-1347	chr17	71890363	71891623	+	19.8	1260	Intergenic	MLT1L|LTR|ERVL-MaLR	-66317	NR_027146	283982	Hs.464079	NM_182564		LINC00469	C17orf54	long intergenic non-protein coding RNA 469	ncRNA	19.84	3.4	5.835294118	1.47E-07
chr17-1348	chr17	71904632	71905632	+	17.9	1000	Intergenic	Intergenic	-80456	NR_027146	283982	Hs.464079	NM_182564		LINC00469	C17orf54	long intergenic non-protein coding RNA 469	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr17-1350	chr17	72001861	72002861	+	17.9	1000	Intergenic	Intergenic	-177685	NR_027146	283982	Hs.464079	NM_182564		LINC00469	C17orf54	long intergenic non-protein coding RNA 469	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr17-1353	chr17	72350320	72351320	+	17.9	1000	"intron (NM_153209, intron 18 of 19)"	"intron (NM_153209, intron 18 of 19)"	7138	NM_001080466	388419	Hs.211870	NM_001080466	ENSG00000204347	BTBD17	BTBD17A|LGALS3BPL|TANGO10A	BTB domain containing 17	protein-coding	17.92	1.46	12.2739726	2.41E-11
chr17-1355	chr17	72687911	72689192	+	19.8	1281	"intron (NM_175738, intron 1 of 8)"	"intron (NM_175738, intron 1 of 8)"	20588	NM_001289083	146722	Hs.567706	NM_139018	ENSG00000186074	CD300LF	CD300f|CLM-1|CLM1|IREM-1|IREM1|IgSF13|LMIR3|NKIR	CD300 molecule like family member f	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr17-1358	chr17	72891969	72896136	+	67.8	4167	Intergenic	AluSz|SINE|Alu	-4143	NM_178128	283985	Hs.448845	NM_178128	ENSG00000172782	FADS6	FP18279	fatty acid desaturase 6	protein-coding	67.85	9.22	7.359002169	5.67E-28
chr17-1362	chr17	74515953	74516953	+	16.6	1000	Intergenic	Intergenic	-7215	NR_033357	768206	Hs.634380	NM_001077620	ENSG00000214140	PRCD	RP36	progressive rod-cone degeneration	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr17-1364	chr17	74964233	74965233	+	17.3	1000	"intron (NR_136416, intron 1 of 2)"	MIR|SINE|MIR	548	NR_136417	105371899	Hs.634683	NR_136416	ENSG00000267568	LOC105371899	-	uncharacterized LOC105371899	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr17-1365	chr17	75318892	75320633	+	27.5	1741	"intron (NM_006640, intron 1 of 10)"	"intron (NM_006640, intron 1 of 10)"	4165	NM_006640	10801	Hs.440932	NM_006640	ENSG00000184640	9-Sep	AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1	septin 9	protein-coding	27.52	5.82	4.728522337	1.71E-08
chr17-1367	chr17	75950182	75951182	+	16	1000	Intergenic	Intergenic	-49636	NM_018996	57690	Hs.406810	NM_018996	ENSG00000078687	TNRC6C	-	trinucleotide repeat containing 6C	protein-coding	16	3.4	4.705882353	2.25E-05
chr17-1368	chr17	76324041	76326563	+	44.2	2522	Intergenic	L1MC4|LINE|L1	30858	NM_003955	9021	Hs.527973	NM_003955	ENSG00000184557	SOCS3	ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3	suppressor of cytokine signaling 3	protein-coding	44.17	7.77	5.684684685	3.96E-15
chr17-1371	chr17	76489830	76490830	+	17.9	1000	"intron (NR_102401, intron 4 of 5)"	"intron (NR_102401, intron 4 of 5)"	9338	NR_102401	100996295	Hs.615304	NR_102401		DNAH17-AS1	-	DNAH17 antisense RNA 1	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr17-1372	chr17	77018758	77019758	+	17.9	1000	promoter-TSS (NM_030968)	promoter-TSS (NM_030968)	242	NM_153372	114897	Hs.201398	NM_030968	ENSG00000173918	C1QTNF1	CTRP1|GIP|ZSIG37	C1q and tumor necrosis factor related protein 1	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr17-1374	chr17	77120679	77125138	+	71	4459	"intron (NM_001082575, intron 4 of 14)"	L3|LINE|CR1	51889	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	71.05	9.71	7.317198764	1.14E-28
chr17-1384	chr17	77263187	77268828	+	82.6	5641	"intron (NM_001082575, intron 3 of 14)"	"intron (NM_001082575, intron 3 of 14)"	194988	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	82.57	16.5	5.004242424	2.84E-24
chr17-1389	chr17	77444282	77445282	+	17.3	1000	"intron (NM_001082575, intron 2 of 14)"	MLT1C|LTR|ERVL-MaLR	67448	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr17-1399	chr17	78421922	78422922	+	17.9	1000	Intergenic	Intergenic	27982	NM_002522	4884	Hs.514556	NM_002522	ENSG00000171246	NPTX1	NP1	neuronal pentraxin 1	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr17-1402	chr17	79006214	79007214	+	16.6	1000	"non-coding (NR_026857, exon 2 of 2)"	"non-coding (NR_026857, exon 2 of 2)"	1805	NR_026857	440465	Hs.448889	NM_001004336	ENSG00000226137	BAIAP2-AS1	-	BAIAP2 antisense RNA 1 (head to head)	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr17-1412	chr17	81067705	81068705	+	17.9	1000	Intergenic	Intergenic	30638	NM_001004431	284207	Hs.378821	NM_001004431	ENSG00000176845	METRNL	-	"meteorin like, glial cell differentiation regulator"	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr17-1415	chr17	140232	141232	+	16	1000	"intron (NM_006987, intron 5 of 9)"	"intron (NM_006987, intron 5 of 9)"	-40264	NM_001242780	100506388	Hs.627744	NM_001242780	ENSG00000262061	LOC100506388	-	uncharacterized LOC100506388	protein-coding	16	2.91	5.498281787	4.98E-06
chr17-1426	chr17	5675672	5676929	+	17.9	1257	"non-coding (NR_040000, exon 1 of 4)"	"non-coding (NR_040000, exon 1 of 4)"	746	NR_040000	339166	Hs.736088	NR_040000	ENSG00000179314	LOC339166	-	uncharacterized LOC339166	ncRNA	17.92	0.97	18.4742268	1.12E-13
chr17-1427	chr17	6033787	6034787	+	16	1000	Intergenic	MLT1F2|LTR|ERVL-MaLR	60353	NM_015253	23302	Hs.370166	NM_015253	ENSG00000179314	WSCD1	-	WSC domain containing 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-1433	chr17	6642031	6643512	+	26.2	1481	Intergenic	HAL1|LINE|L1	-16385	NR_046397	54739	Hs.441975	NM_017523	ENSG00000132530	XAF1	BIRC4BP|HSXIAPAF1|XIAPAF1	XIAP associated factor 1	protein-coding	26.24	3.88	6.762886598	1.00E-10
chr17-1436	chr17	7641714	7642714	+	16.6	1000	"intron (NM_001303270, intron 9 of 13)"	"intron (NM_001303270, intron 9 of 13)"	-15424	NR_002778	118432	Hs.658086	NR_002778	ENSG00000240480	RPL29P2	RPL29_10_1510	ribosomal protein L29 pseudogene 2	pseudo	16.64	2.91	5.718213058	8.60E-07
chr17-1437	chr17	7722147	7723911	+	32	1764	"intron (NM_020877, intron 72 of 85)"	MER5A1|DNA|hAT-Charlie	-20206	NM_001080424	23135	Hs.223678	NM_001080424	ENSG00000132510	KDM6B	JMJD3	lysine demethylase 6B	protein-coding	32	4.85	6.597938144	5.03E-13
chr17-1447	chr17	11740168	11741168	+	15.4	1000	"intron (NM_001372, intron 49 of 68)"	"intron (NM_001372, intron 49 of 68)"	-45551	NM_004662	1770	Hs.567259	NM_001372	ENSG00000007174	DNAH9	DNAH17L|DNEL1|DYH9|Dnahc9|HL-20|HL20	dynein axonemal heavy chain 9	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr17-1448	chr17	12485808	12486808	+	16.6	1000	"intron (NR_034144, intron 1 of 2)"	L1MC1|LINE|L1	33023	NR_034144	284034	Hs.376614	NR_034144	ENSG00000179136	LINC00670	-	long intergenic non-protein coding RNA 670	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr17-1451	chr17	15161696	15166976	+	77.4	5280	promoter-TSS (NM_153322)	promoter-TSS (NM_153322)	-175	NM_153322	5376	Hs.372031	NM_000304	ENSG00000109099	PMP22	CMT1A|CMT1E|DSS|GAS-3|GAS3|HMSNIA|HNPP|Sp110	peripheral myelin protein 22	protein-coding	77.45	12.62	6.137083994	3.18E-27
chr17-1457	chr17	16942749	16943749	+	17.3	1000	Intergenic	L2c|LINE|L2	-2825	NM_201274	23164	Hs.462341	NM_015134	ENSG00000133030	MPRIP	M-RIP|MRIP|RHOIP3|RIP3|p116Rip	myosin phosphatase Rho interacting protein	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr17-1459	chr17	19215373	19216890	+	21.8	1517	"intron (NM_001102664, intron 3 of 7)"	"intron (NM_001102664, intron 3 of 7)"	-6557	NR_048576	100874018	Hs.621672	NR_048576	ENSG00000235397	EPN2-AS1	-	EPN2 antisense RNA 1	ncRNA	21.76	1.94	11.21649485	8.00E-13
chr17-1461	chr17	19321816	19322816	+	18.6	1000	Intergenic	MLT1J2|LTR|ERVL-MaLR	7825	NM_007148	7732	Hs.189482	NM_007148	ENSG00000128482	RNF112	BFP|ZNF179	ring finger protein 112	protein-coding	18.56	1.46	12.71232877	2.41E-11
chr17-1462	chr17	19324865	19325865	+	16.6	1000	Intergenic	Intergenic	10874	NM_007148	7732	Hs.189482	NM_007148	ENSG00000128482	RNF112	BFP|ZNF179	ring finger protein 112	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr17-1463	chr17	19407097	19412424	+	64	5327	Intergenic	AluSz|SINE|Alu	-27407	NM_018242	55244	Hs.232054	NM_018242	ENSG00000142494	SLC47A1	MATE1	solute carrier family 47 member 1	protein-coding	64.01	14.56	4.396291209	3.04E-17
chr17-1465	chr17	19452574	19453897	+	21.8	1323	"intron (NM_018242, intron 5 of 16)"	"intron (NM_018242, intron 5 of 16)"	-7638	NR_003022	677882	Hs.658450	NR_003022	ENSG00000266079	SNORA59B	ACA59	"small nucleolar RNA, H/ACA box 59B"	snoRNA	21.76	4.37	4.979405034	1.32E-07
chr17-1471	chr17	20862280	20863280	+	15.4	1000	"intron (NR_123730, intron 5 of 5)"	"intron (NR_123730, intron 5 of 5)"	20947	NR_123730	339260	Hs.661076	NR_123730	ENSG00000233098	LOC339260	-	uncharacterized LOC339260	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr17-1472	chr17	21185715	21187017	+	18.6	1302	Intergenic	Intergenic	-1602	NM_001316332	5606	Hs.514012	NM_002756	ENSG00000034152	MAP2K3	MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2	mitogen-activated protein kinase kinase 3	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr17-1480	chr17	25685022	25686022	+	16.6	1000	Intergenic	AluSz|SINE|Alu	-59509	NR_033892	440419	Hs.385755	NR_033892	ENSG00000266433	TBC1D3P5	-	TBC1 domain family member 3 pseudogene 5	pseudo	16.64	0	17.14115603	3.68E-16
chr17-1487	chr17	26565673	26566673	+	16	1000	Intergenic	LTR2C|LTR|ERV1	-8297	NR_002181	23614	Hs.744962	NR_002181	ENSG00000265060	PPY2P	PPY2	"pancreatic polypeptide 2, pseudogene"	pseudo	16	1.46	10.95890411	3.44E-09
chr17-1491	chr17	27507660	27509321	+	26.9	1661	Intergenic	Intergenic	-1083	NM_203318	399687	Hs.462590	NM_078471	ENSG00000196535	MYO18A	MAJN|MYSPDZ|SP-R210|SPR210	myosin XVIIIA	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr17-1493	chr17	30591061	30594809	+	73	3748	promoter-TSS (NM_138328)	promoter-TSS (NM_138328)	-260	NM_001330181	162494	Hs.655027	NM_138328	ENSG00000141314	RHBDL3	RHBDL4|VRHO	rhomboid like 3	protein-coding	72.97	10.19	7.1609421	2.28E-29
chr17-1494	chr17	30897571	30899118	+	25.6	1547	"intron (NM_015194, intron 21 of 21)"	"intron (NM_015194, intron 21 of 21)"	84239	NM_003885	8851	Hs.500015	NM_003885	ENSG00000176749	CDK5R1	CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a	cyclin dependent kinase 5 regulatory subunit 1	protein-coding	25.6	4.85	5.278350515	4.26E-09
chr17-1495	chr17	31818643	31819643	+	17.3	1000	"intron (NM_001094, intron 1 of 9)"	"intron (NM_001094, intron 1 of 9)"	41636	NR_037584	100506677	Hs.652571	NR_037584	ENSG00000265544	AA06	AA02|AA04|AA05	uncharacterized LOC100506677	pseudo	17.28	2.91	5.93814433	8.60E-07
chr17-1500	chr17	32933213	32936119	+	43.5	2906	"intron (NM_001304438, intron 1 of 8)"	MER21C|LTR|ERVL	26898	NM_001304438	124842	Hs.310482	NM_207313	ENSG00000181291	TMEM132E	DFNB99	transmembrane protein 132E	protein-coding	43.53	8.25	5.276363636	2.15E-14
chr17-1504	chr17	33038106	33039106	+	16.6	1000	Intergenic	Intergenic	130838	NM_001304438	124842	Hs.310482	NM_207313	ENSG00000181291	TMEM132E	DFNB99	transmembrane protein 132E	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr17-1506	chr17	33115152	33116152	+	15.4	1000	Intergenic	Intergenic	172876	NM_006584	10693	Hs.73072	NM_006584	ENSG00000132141	CCT6B	CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303	chaperonin containing TCP1 subunit 6B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr17-1507	chr17	33821876	33823309	+	20.5	1433	Intergenic	Intergenic	-7834	NM_001195790	100506736	Hs.447559	NM_001145027	ENSG00000205045	SLFN12L	-	schlafen family member 12 like	protein-coding	20.48	2.43	8.427983539	2.25E-10
chr17-1508	chr17	34395796	34398524	+	45.4	2728	"intron (NM_002988, intron 1 of 2)"	"intron (NM_002988, intron 1 of 2)"	5528	NM_002988	6362	Hs.143961	NM_002988	ENSG00000275385	CCL18	AMAC-1|AMAC1|CKb7|DC-CK1|DCCK1|MIP-4|PARC|SCYA18	C-C motif chemokine ligand 18	protein-coding	45.45	6.8	6.683823529	1.33E-17
chr17-151	chr17	77772219	77775889	+	69.8	3670	Intergenic	CpG-11232	-3139	NM_020649	57332	Hs.387258	NM_020649	ENSG00000141570	CBX8	PC3|RC1	chromobox 8	protein-coding	69.77	16.5	4.228484848	1.29E-17
chr17-1510	chr17	35055704	35056704	+	16.6	1000	Intergenic	Intergenic	98179	NM_024864	79922	Hs.194864	NM_024864	ENSG00000278619	MRM1	-	mitochondrial rRNA methyltransferase 1	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr17-1514	chr17	36028615	36029615	+	16	1000	Intergenic	Intergenic	-25622	NM_007010	11056	Hs.590937	NM_007010	ENSG00000278053	DDX52	HUSSY19|ROK1	DExD-box helicase 52	protein-coding	16	3.4	4.705882353	2.25E-05
chr17-1520	chr17	37182660	37184469	+	30.1	1809	promoter-TSS (NR_135645)	promoter-TSS (NR_135645)	-201	NR_135645	105371766	Hs.311469	NR_135645	ENSG00000266013	LINC02079	-	long intergenic non-protein coding RNA 2079	ncRNA	30.08	3.88	7.75257732	2.58E-13
chr17-1525	chr17	38859109	38861332	+	35.2	2223	promoter-TSS (NM_019016)	promoter-TSS (NM_019016)	-218	NM_019016	192666	Hs.87383	NM_019016	ENSG00000167916	KRT24	K24|KA24	keratin 24	protein-coding	35.2	5.82	6.048109966	6.75E-13
chr17-1527	chr17	38926270	38929847	+	44.2	3577	"exon (NM_181539, exon 1 of 8)"	"exon (NM_181539, exon 1 of 8)"	353	NM_181539	353288	Hs.592133	NM_181539	ENSG00000186393	KRT26	CK26|K25|K25IRS2|K26|KRT25B	keratin 26	protein-coding	44.17	8.74	5.053775744	1.04E-13
chr17-1529	chr17	39166849	39167849	+	16.6	1000	Intergenic	L2c|LINE|L2	-1983	NM_031958	83896	Hs.307027	NM_031958	ENSG00000212901	KRTAP3-1	KAP3.1|KRTAP3.1	keratin associated protein 3-1	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr17-153	chr17	77855063	77856346	+	25.6	1283	Intergenic	L1ME2|LINE|L1	-37452	NR_110851	101928738	Hs.399280	NR_110851	ENSG00000262188	LINC01978	-	long intergenic non-protein coding RNA 1978	ncRNA	25.6	5.34	4.794007491	2.00E-08
chr17-1532	chr17	40827146	40828146	+	16.6	1000	"intron (NM_024927, intron 1 of 12)"	"intron (NM_024927, intron 1 of 12)"	462	NR_073574	79990	Hs.632251	NM_024927	ENSG00000068137	PLEKHH3	-	"pleckstrin homology, MyTH4 and FERM domain containing H3"	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr17-1534	chr17	41777265	41778265	+	17.3	1000	Intergenic	AluSc|SINE|Alu	-38503	NM_001040002	4222	Hs.438	NM_004527	ENSG00000005102	MEOX1	KFS2|MOX1	mesenchyme homeobox 1	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr17-1537	chr17	41880473	41882206	+	31.4	1733	"intron (NM_001330233, intron 19 of 19)"	"intron (NM_001330233, intron 19 of 19)"	23536	NM_001136483	284067	Hs.252707	NM_001136483	ENSG00000231256	C17orf105	-	chromosome 17 open reading frame 105	protein-coding	31.36	5.82	5.388316151	1.29E-10
chr17-1540	chr17	42346194	42347194	+	17.3	1000	Intergenic	Intergenic	-1192	NM_000342	6521	Hs.210751	NM_000342	ENSG00000004939	SLC4A1	AE1|BND3|CD233|CHC|DI|EMPB3|EPB3|FR|RTA1A|SAO|SPH4|SW|WD|WD1|WR	solute carrier family 4 member 1 (Diego blood group)	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr17-1543	chr17	43032311	43033311	+	16	1000	Intergenic	Intergenic	-7732	NM_001264573	146909	Hs.135094	NM_001080443	ENSG00000186185	KIF18B	-	kinesin family member 18B	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-1545	chr17	44862372	44863372	+	16.6	1000	"intron (NM_030753, intron 1 of 4)"	"intron (NM_030753, intron 1 of 4)"	33254	NM_030753	7473	Hs.445884	NM_030753	ENSG00000108379	WNT3	INT4|TETAMS	Wnt family member 3	protein-coding	16.64	0.49	33.95918367	3.68E-16
chr17-1546	chr17	44870678	44871678	+	16.6	1000	"intron (NM_030753, intron 1 of 4)"	MIRc|SINE|MIR	24948	NM_030753	7473	Hs.445884	NM_030753	ENSG00000108379	WNT3	INT4|TETAMS	Wnt family member 3	protein-coding	16.64	0.49	33.95918367	3.68E-16
chr17-1548	chr17	45301781	45302781	+	16	1000	Intergenic	Intergenic	15567	NM_002476	4635	Hs.463300	NM_002476	ENSG00000198336	MYL4	ALC1|AMLC|GT1|PRO1957	myosin light chain 4	protein-coding	16	2.43	6.58436214	7.90E-07
chr17-1554	chr17	46658746	46660064	+	21.1	1318	"intron (NM_001330322, intron 1 of 4)"	CpG	579	NM_001330322	3213	Hs.654560	NM_002146	ENSG00000120093	HOXB3	HOX2|HOX2G|Hox-2.7	homeobox B3	protein-coding	21.12	0.49	43.10204082	5.97E-21
chr17-1571	chr17	47337479	47338479	+	15.4	1000	Intergenic	CpG	12374	NR_034161	124871	Hs.446890	NM_001007529	ENSG00000177369	FLJ40194	-	uncharacterized FLJ40194	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr17-1572	chr17	47587067	47588067	+	16.6	1000	promoter-TSS (NR_106751)	promoter-TSS (NR_106751)	-612	NR_106751	102465141		NR_106751	ENSG00000277478	MIR6165	hsa-mir-6165	microRNA 6165	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr17-1574	chr17	47941585	47942888	+	21.8	1303	Intergenic	Intergenic	-16857	NM_001077504	255061	Hs.652130	NM_170685	ENSG00000176358	TAC4	EK|HK-1|HK1|PPT-C	tachykinin 4 (hemokinin)	protein-coding	21.76	0.97	22.43298969	1.19E-17
chr17-1578	chr17	47986505	47989712	+	65.3	3207	Intergenic	Intergenic	-58454	NM_138281	1748	Hs.591167	NM_001934	ENSG00000108813	DLX4	BP1|DLX7|DLX8|DLX9|OFC15	distal-less homeobox 4	protein-coding	65.29	4.85	13.46185567	5.19E-39
chr17-1579	chr17	48000313	48001948	+	23	1635	Intergenic	Intergenic	-45432	NM_138281	1748	Hs.591167	NM_001934	ENSG00000108813	DLX4	BP1|DLX7|DLX8|DLX9|OFC15	distal-less homeobox 4	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr17-1585	chr17	48629478	48630478	+	15.4	1000	"intron (NM_022827, intron 14 of 16)"	AluJb|SINE|Alu	5528	NM_001258372	64847	Hs.103147	NM_022827	ENSG00000006282	SPATA20	HEL-S-98|SSP411|Tisp78	spermatogenesis associated 20	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr17-1586	chr17	48637290	48640722	+	51.2	3432	"exon (NM_018896, exon 1 of 38)"	"exon (NM_018896, exon 1 of 38)"	463	NR_038439	253962	Hs.558704	NR_038439	ENSG00000250107	CACNA1G-AS1	-	CACNA1G antisense RNA 1	ncRNA	51.21	7.77	6.590733591	6.93E-20
chr17-1588	chr17	49414069	49415069	+	19.2	1000	"non-coding (NR_122104, exon 1 of 3)"	"non-coding (NR_122104, exon 1 of 3)"	493	NR_122104	440446	Hs.626751	NR_122104	ENSG00000225860	LINC02072	-	long intergenic non-protein coding RNA 2072	ncRNA	19.2	4.37	4.393592677	3.16E-06
chr17-1590	chr17	49549937	49550937	+	17.3	1000	Intergenic	Intergenic	136361	NR_122104	440446	Hs.626751	NR_122104	ENSG00000225860	LINC02072	-	long intergenic non-protein coding RNA 2072	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr17-1591	chr17	55897307	55898307	+	15.4	1000	Intergenic	Intergenic	29626	NM_016070	51649	Hs.5836	NM_016070	ENSG00000181610	MRPS23	CGI-138|HSPC329|MRP-S23	mitochondrial ribosomal protein S23	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr17-1592	chr17	56599528	56600528	+	16.6	1000	"intron (NM_004574, intron 5 of 11)"	AluSz|SINE|Alu	2830	NR_110810	101927688	Hs.660034	NR_110810	ENSG00000264672	SEPT4-AS1	-	SEPT4 antisense RNA 1	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr17-1594	chr17	60182891	60185233	+	35.8	2342	Intergenic	Intergenic	-41419	NM_005121	9969	Hs.282678	NM_005121	ENSG00000108510	MED13	ARC250|DRIP250|HSPC221|THRAP1|TRAP240	mediator complex subunit 13	protein-coding	35.84	4.85	7.389690722	1.37E-15
chr17-1598	chr17	64092953	64093953	+	18.6	1000	"intron (NM_001199165, intron 6 of 26)"	L2b|LINE|L2	94534	NM_001302891	201134	Hs.408676	NM_145036	ENSG00000154240	CEP112	CCDC46|MACOCO	centrosomal protein 112	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr17-1599	chr17	64111332	64112332	+	17.3	1000	"intron (NM_001199165, intron 6 of 26)"	LOR1b|LTR|ERV1	76155	NM_001302891	201134	Hs.408676	NM_145036	ENSG00000154240	CEP112	CCDC46|MACOCO	centrosomal protein 112	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr17-1600	chr17	64302692	64303692	+	16	1000	"intron (NM_002737, intron 2 of 16)"	"intron (NM_002737, intron 2 of 16)"	4266	NM_002737	5578	Hs.531704	NM_002737	ENSG00000154229	PRKCA	AAG6|PKC-alpha|PKCA|PRKACA	protein kinase C alpha	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-1602	chr17	64664029	64665029	+	16.6	1000	"intron (NM_002737, intron 5 of 16)"	L1M6|LINE|L1	-118661	NR_030364	693219		NR_030364	ENSG00000207943	MIR634	MIRN634|hsa-mir-634	microRNA 634	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr17-1603	chr17	64897304	64901512	+	65.9	4208	Intergenic	Intergenic	26017	NM_145811	27091	Hs.278907	NM_014404	ENSG00000075429	CACNG5	-	calcium voltage-gated channel auxiliary subunit gamma 5	protein-coding	65.93	13.11	5.028985507	9.49E-20
chr17-1610	chr17	67346621	67347621	+	16.6	1000	Intergenic	Intergenic	-23798	NM_172232	23461	Hs.731824	NM_018672	ENSG00000154265	ABCA5	ABC13|EST90625	ATP binding cassette subfamily A member 5	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr17-1614	chr17	71454144	71455422	+	19.8	1278	"intron (NM_001144952, intron 3 of 44)"	L2|LINE|L2	-55039	NR_135635	101928251	Hs.434726	NR_135635	ENSG00000264985	LOC101928251	-	uncharacterized LOC101928251	ncRNA	19.84	3.4	5.835294118	1.47E-07
chr17-1617	chr17	71607297	71609209	+	30.1	1912	"intron (NM_001144952, intron 1 of 44)"	"intron (NM_001144952, intron 1 of 44)"	31974	NM_001144952	54549	Hs.435719	NM_019064	ENSG00000069188	SDK2	-	sidekick cell adhesion molecule 2	protein-coding	30.08	3.4	8.847058824	1.72E-14
chr17-1620	chr17	71873239	71879063	+	86.4	5824	Intergenic	Intergenic	-51475	NR_027146	283982	Hs.464079	NM_182564		LINC00469	C17orf54	long intergenic non-protein coding RNA 469	ncRNA	86.41	12.62	6.847068146	6.44E-33
chr17-1621	chr17	72022138	72023138	+	17.3	1000	Intergenic	AluSx1|SINE|Alu	-177157	NM_000999	6169	Hs.380953	NM_000999	ENSG00000172809	RPL38	L38	ribosomal protein L38	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr17-1622	chr17	72026971	72029391	+	33.3	2420	Intergenic	Intergenic	-171614	NM_000999	6169	Hs.380953	NM_000999	ENSG00000172809	RPL38	L38	ribosomal protein L38	protein-coding	33.28	7.77	4.283140283	1.68E-09
chr17-1627	chr17	72403447	72404447	+	16.6	1000	Intergenic	Intergenic	-23720	NM_022036	55890	Hs.446438	NM_018653	ENSG00000170412	GPRC5C	RAIG-3|RAIG3	G protein-coupled receptor class C group 5 member C	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr17-1628	chr17	72534283	72535549	+	19.8	1266	Intergenic	Intergenic	-7303	NM_174892	124599	Hs.313343	NM_174892	ENSG00000178789	CD300LB	CD300b|CLM-7|CLM7|CMRF35-A2|IREM-3|IREM3|TREM-5|TREM5	CD300 molecule like family member b	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr17-1631	chr17	72661290	72662601	+	22.4	1311	Intergenic	AluSp|SINE|Alu	-5311	NM_175738	326624	Hs.351413	NM_175738	ENSG00000172794	RAB37	-	"RAB37, member RAS oncogene family"	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr17-1634	chr17	72711947	72713385	+	21.1	1438	"intron (NM_175738, intron 1 of 8)"	MIRb|SINE|MIR	-3527	NM_001289087	146722	Hs.567706	NM_139018	ENSG00000186074	CD300LF	CD300f|CLM-1|CLM1|IREM-1|IREM1|IgSF13|LMIR3|NKIR	CD300 molecule like family member f	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr17-1635	chr17	72727196	72728196	+	16	1000	"intron (NM_175738, intron 2 of 8)"	"intron (NM_175738, intron 2 of 8)"	-5003	NM_001330471	326624	Hs.351413	NM_175738	ENSG00000172794	RAB37	-	"RAB37, member RAS oncogene family"	protein-coding	16	0	16.4818808	1.26E-14
chr17-1639	chr17	73073314	73074314	+	17.3	1000	Intergenic	CpG	-10008	NM_001271765	9121	Hs.592095	NM_004695	ENSG00000170190	SLC16A5	MCT5|MCT6	solute carrier family 16 member 5	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr17-1643	chr17	74855023	74856023	+	15.4	1000	"intron (NR_135283, intron 2 of 2)"	MER34C2|LTR|ERV1	3275	NR_135283	283994	Hs.645372	NR_135283	ENSG00000267535	LINC00868	C17orf52	long intergenic non-protein coding RNA 868	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr17-1648	chr17	77064682	77065682	+	17.3	1000	Intergenic	L1ME3C|LINE|L1	-5837	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr17-1656	chr17	77180586	77186797	+	84.5	6211	"intron (NM_001082575, intron 4 of 14)"	"intron (NM_001082575, intron 4 of 14)"	112672	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	84.49	15.53	5.440437862	4.20E-27
chr17-1662	chr17	77421654	77424362	+	41.6	2708	"intron (NM_001082575, intron 2 of 14)"	AluSq|SINE|Alu	89222	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	41.61	5.34	7.792134831	4.72E-18
chr17-1663	chr17	77449837	77451162	+	21.1	1325	"intron (NM_001082575, intron 2 of 14)"	"intron (NM_001082575, intron 2 of 14)"	61731	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr17-1665	chr17	77537113	77540127	+	41.6	3014	Intergenic	AluSx|SINE|Alu	-26390	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	41.61	6.8	6.119117647	3.54E-15
chr17-1668	chr17	77736262	77737262	+	16.6	1000	Intergenic	L1MB7|LINE|L1	-15215	NM_005189	84733	Hs.368410	NM_005189	ENSG00000173894	CBX2	CDCA6|M33|SRXY5	chromobox 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr17-1673	chr17	77862350	77865418	+	48.6	3068	Intergenic	L1MB5|LINE|L1	-29272	NR_110851	101928738	Hs.399280	NR_110851	ENSG00000262188	LINC01978	-	long intergenic non-protein coding RNA 1978	ncRNA	48.65	6.31	7.709984152	3.34E-21
chr17-1677	chr17	78070450	78071450	+	14.7	1000	"intron (NM_017950, intron 18 of 19)"	"intron (NM_017950, intron 18 of 19)"	-4375	NR_134848	2548	Hs.1437	NM_000152	ENSG00000171298	GAA	LYAG	"glucosidase alpha, acid"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr17-1679	chr17	78435298	78436298	+	17.3	1000	Intergenic	Intergenic	14606	NM_002522	4884	Hs.514556	NM_002522	ENSG00000171246	NPTX1	NP1	neuronal pentraxin 1	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr17-1680	chr17	78487119	78488793	+	26.2	1674	Intergenic	MLT2C1|LTR|ERVL	-30669	NM_020761	57521	Hs.133044	NM_020761	ENSG00000141564	RPTOR	KOG1|Mip1	regulatory associated protein of MTOR complex 1	protein-coding	26.24	4.85	5.410309278	4.26E-09
chr17-1682	chr17	78496077	78497670	+	23.7	1593	Intergenic	Intergenic	-21752	NM_020761	57521	Hs.133044	NM_020761	ENSG00000141564	RPTOR	KOG1|Mip1	regulatory associated protein of MTOR complex 1	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr17-1683	chr17	78998668	79000038	+	22.4	1370	Intergenic	Intergenic	9166	NR_026857	440465	Hs.448889	NM_001004336	ENSG00000226137	BAIAP2-AS1	-	BAIAP2 antisense RNA 1 (head to head)	ncRNA	22.4	0.97	23.09278351	1.19E-17
chr17-1686	chr17	79069983	79071926	+	39	1943	"intron (NM_017451, intron 6 of 14)"	"intron (NM_017451, intron 6 of 14)"	28219	NR_030394	724027		NR_030394	ENSG00000207736	MIR657	MIRN657|hsa-mir-657	microRNA 657	ncRNA	39.04	5.82	6.70790378	2.56E-15
chr17-1689	chr17	79157290	79158809	+	24.3	1519	Intergenic	Intergenic	-18177	NM_001080395	9625	Hs.514575	NM_004920	ENSG00000181409	AATK	AATYK|AATYK1|LMR1|LMTK1|PPP1R77|p35BP	apoptosis associated tyrosine kinase	protein-coding	24.32	5.82	4.178694158	3.56E-07
chr17-169	chr17	42907656	42909174	+	35.2	1518	promoter-TSS (NM_001080383)	promoter-TSS (NM_001080383)	-236	NM_001080383	10052	Hs.712052	NM_005497	ENSG00000182963	GJC1	CX45|GJA7	gap junction protein gamma 1	protein-coding	35.2	1.94	18.1443299	1.63E-24
chr17-1693	chr17	80333014	80334014	+	16.6	1000	TTS (NM_018949)	TTS (NM_018949)	1361	NM_018949	2837	Hs.192720	NM_018949	ENSG00000181408	UTS2R	GPR14|UR-2-R|UTR|UTR2	urotensin 2 receptor	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr17-1700	chr17	110767	111767	+	16	1000	"intron (NM_001190413, intron 4 of 7)"	MLT1A|LTR|ERVL-MaLR	-69729	NM_001242780	100506388	Hs.627744	NM_001242780	ENSG00000262061	LOC100506388	-	uncharacterized LOC100506388	protein-coding	16	0.97	16.49484536	3.54E-11
chr17-1701	chr17	173557	174982	+	17.9	1425	"intron (NM_006987, intron 3 of 9)"	"intron (NM_006987, intron 3 of 9)"	-6727	NM_001242780	100506388	Hs.627744	NM_001242780	ENSG00000262061	LOC100506388	-	uncharacterized LOC100506388	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr17-1703	chr17	831328	832328	+	16	1000	"intron (NM_022463, intron 1 of 7)"	AluSx1|SINE|Alu	18956	NR_135633	101927727	Hs.666198	NR_135633	ENSG00000262003	LOC101927727	-	uncharacterized LOC101927727	ncRNA	16	0.97	16.49484536	3.54E-11
chr17-1704	chr17	836684	837684	+	16	1000	"intron (NM_022463, intron 1 of 7)"	"intron (NM_022463, intron 1 of 7)"	24312	NR_135633	101927727	Hs.666198	NR_135633	ENSG00000262003	LOC101927727	-	uncharacterized LOC101927727	ncRNA	16	3.88	4.12371134	7.91E-05
chr17-1706	chr17	1656855	1659164	+	32.6	2309	"3' UTR (NM_001165921, exon 9 of 9)"	"3' UTR (NM_001165921, exon 9 of 9)"	-7210	NM_002615	5176	Hs.532768	NM_002615	ENSG00000132386	SERPINF1	EPC-1|OI12|OI6|PEDF|PIG35	serpin family F member 1	protein-coding	32.64	7.77	4.200772201	7.28E-09
chr17-1710	chr17	3092545	3093545	+	16	1000	Intergenic	Intergenic	-7766	NM_012352	26189	Hs.532660	NM_012352	ENSG00000172150	OR1A2	OR17-6	olfactory receptor family 1 subfamily A member 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr17-1713	chr17	4485924	4489230	+	48	3306	promoter-TSS (NM_001114974)	promoter-TSS (NM_001114974)	-257	NM_001114974	342527	Hs.441709	NM_198501	ENSG00000188176	SMTNL2	-	smoothelin like 2	protein-coding	48.01	6.8	7.060294118	2.78E-19
chr17-1717	chr17	5535271	5536271	+	16	1000	Intergenic	Intergenic	-47939	NM_033007	22861	Hs.652273	NM_014922	ENSG00000091592	NLRP1	CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|NAC|NALP1|PP1044|SLEV1|VAMAS1	NLR family pyrin domain containing 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-1721	chr17	5927546	5928546	+	16	1000	Intergenic	Intergenic	-45888	NM_015253	23302	Hs.370166	NM_015253	ENSG00000179314	WSCD1	-	WSC domain containing 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-1722	chr17	5939724	5940724	+	16	1000	Intergenic	Intergenic	-33710	NM_015253	23302	Hs.370166	NM_015253	ENSG00000179314	WSCD1	-	WSC domain containing 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr17-1723	chr17	5959485	5960485	+	16	1000	Intergenic	MER45A|DNA|hAT-Tip100	-13949	NM_015253	23302	Hs.370166	NM_015253	ENSG00000179314	WSCD1	-	WSC domain containing 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr17-1728	chr17	6334897	6336671	+	29.4	1774	"intron (NM_001033055, intron 1 of 4)"	L1MC5|LINE|L1	2668	NM_001285402	23746	Hs.279887	NM_014336	ENSG00000129221	AIPL1	AIPL2|LCA4	aryl hydrocarbon receptor interacting protein like 1	protein-coding	29.44	5.82	5.058419244	6.85E-10
chr17-1729	chr17	6582820	6585580	+	37.1	2760	Intergenic	Intergenic	23162	NR_045985	100652883	Hs.549540	NR_045985		ALOX15P1	ALOX15P	arachidonate 15-lipoxygenase pseudogene 1	pseudo	37.12	7.28	5.098901099	3.68E-12
chr17-1739	chr17	7689138	7690138	+	14.1	1000	"exon (NM_020877, exon 40 of 86)"	"exon (NM_020877, exon 40 of 86)"	32000	NR_002778	118432	Hs.658086	NR_002778	ENSG00000240480	RPL29P2	RPL29_10_1510	ribosomal protein L29 pseudogene 2	pseudo	14.08	2.91	4.838487973	2.67E-05
chr17-1744	chr17	7977146	7978146	+	15.4	1000	"intron (NM_001139, intron 12 of 14)"	"intron (NM_001139, intron 12 of 14)"	13375	NM_001139	242	Hs.136574	NM_001139	ENSG00000179477	ALOX12B	12R-LOX|ARCI2	"arachidonate 12-lipoxygenase, 12R type"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr17-1748	chr17	8956436	8957798	+	22.4	1362	"intron (NM_004822, intron 2 of 6)"	"intron (NM_004822, intron 2 of 6)"	32258	NM_004822	9423	Hs.660885	NM_004822	ENSG00000065320	NTN1	NTN1L	netrin 1	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr17-1750	chr17	9009982	9010982	+	16.6	1000	"intron (NM_004822, intron 2 of 6)"	"intron (NM_004822, intron 2 of 6)"	71953	NR_110828	101928266	Hs.639880	NR_110828	ENSG00000262966	LOC101928266	-	uncharacterized LOC101928266	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr17-1751	chr17	9037881	9038881	+	16.6	1000	"intron (NM_004822, intron 2 of 6)"	"intron (NM_004822, intron 2 of 6)"	44054	NR_110828	101928266	Hs.639880	NR_110828	ENSG00000262966	LOC101928266	-	uncharacterized LOC101928266	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr17-1754	chr17	10654665	10655665	+	16	1000	"intron (NR_073456, intron 2 of 3)"	"intron (NR_073456, intron 2 of 3)"	-21519	NM_001330139	388335	Hs.462230	NM_001004313	ENSG00000187824	TMEM220	-	transmembrane protein 220	protein-coding	16	1.46	10.95890411	3.44E-09
chr17-1755	chr17	10689734	10691146	+	21.8	1412	"intron (NR_073458, intron 1 of 3)"	"intron (NR_073458, intron 1 of 3)"	16976	NR_036581	100289255	Hs.306721	NR_036581	ENSG00000263429	LINC00675	-	long intergenic non-protein coding RNA 675	ncRNA	21.76	2.91	7.47766323	3.87E-10
chr17-1756	chr17	10831434	10832434	+	16	1000	Intergenic	Intergenic	-90516	NM_001101387	644139	Hs.553909	NM_001101387	ENSG00000233670	PIRT	-	phosphoinositide interacting regulator of transient receptor potential channels	protein-coding	16	1.94	8.24742268	7.67E-08
chr17-1757	chr17	10834936	10835936	+	16.6	1000	Intergenic	Intergenic	-94018	NM_001101387	644139	Hs.553909	NM_001101387	ENSG00000233670	PIRT	-	phosphoinositide interacting regulator of transient receptor potential channels	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr17-176	chr17	74705022	74706561	+	36.5	1539	promoter-TSS (NR_130926)	promoter-TSS (NR_130926)	-112	NR_130926	439921	Hs.250723	NM_198530	ENSG00000182534	MXRA7	PS1TP1|TMAP1	matrix remodeling associated 7	protein-coding	36.48	5.82	6.268041237	1.09E-13
chr17-1761	chr17	13498929	13499929	+	14.1	1000	"intron (NM_006042, intron 1 of 1)"	"intron (NM_006042, intron 1 of 1)"	5830	NM_006042	9955	Hs.462270	NM_006042	ENSG00000153976	HS3ST3A1	3-OST-3A|3OST3A1	heparan sulfate-glucosamine 3-sulfotransferase 3A1	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr17-1762	chr17	13502921	13503921	+	16.6	1000	"intron (NM_006042, intron 1 of 1)"	"intron (NM_006042, intron 1 of 1)"	1838	NM_006042	9955	Hs.462270	NM_006042	ENSG00000153976	HS3ST3A1	3-OST-3A|3OST3A1	heparan sulfate-glucosamine 3-sulfotransferase 3A1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr17-1763	chr17	14499304	14500304	+	16	1000	Intergenic	MER83|LTR|ERV1	292747	NR_026880	84815	Hs.597458	NM_032729	ENSG00000266709	MGC12916	-	uncharacterized protein MGC12916	ncRNA	16	2.91	5.498281787	4.98E-06
chr17-1766	chr17	15305938	15307474	+	26.2	1536	Intergenic	Intergenic	-61748	NM_031898	64518	Hs.414648	NM_031898	ENSG00000125409	TEKT3	-	tektin 3	protein-coding	26.24	3.4	7.717647059	9.95E-12
chr17-1769	chr17	18036188	18037188	+	16	1000	"exon (NM_016239, exon 11 of 65)"	"exon (NM_016239, exon 11 of 65)"	24668	NM_016239	51168	Hs.462390	NM_016239	ENSG00000091536	MYO15A	DFNB3|MYO15	myosin XVA	protein-coding	16	1.46	10.95890411	3.44E-09
chr17-1771	chr17	19227193	19228193	+	15.4	1000	"intron (NM_001102664, intron 4 of 7)"	AluSp|SINE|Alu	-18119	NR_048576	100874018	Hs.621672	NR_048576	ENSG00000235397	EPN2-AS1	-	EPN2 antisense RNA 1	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr17-1774	chr17	19514190	19515190	+	16	1000	Intergenic	AluSc8|SINE|Alu	-37374	NM_000382	224	Hs.499886	NM_000382	ENSG00000072210	ALDH3A2	ALDH10|FALDH|SLS	aldehyde dehydrogenase 3 family member A2	protein-coding	16	1.94	8.24742268	7.67E-08
chr17-1777	chr17	19651352	19652702	+	19.2	1350	promoter-TSS (NM_000691)	promoter-TSS (NM_000691)	-281	NM_000691	218	Hs.531682	NM_000691	ENSG00000108602	ALDH3A1	ALDH3|ALDHIII	aldehyde dehydrogenase 3 family member A1	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr17-1780	chr17	20076750	20077750	+	16.6	1000	"intron (NM_001033555, intron 1 of 12)"	AluSq|SINE|Alu	17943	NM_001033555	92521	Hs.431045	NM_152904	ENSG00000128487	SPECC1	CYTSB|HCMOGT-1|HCMOGT1|NSP	sperm antigen with calponin homology and coiled-coil domains 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr17-1781	chr17	20184347	20185347	+	16	1000	"intron (NM_001033555, intron 10 of 12)"	"intron (NM_001033555, intron 10 of 12)"	-39640	NR_023380	348254	Hs.462475	NR_023380		CCDC144CP	CCDC144C	"coiled-coil domain containing 144C, pseudogene"	pseudo	16	0.97	16.49484536	3.54E-11
chr17-1782	chr17	20692564	20693916	+	22.4	1352	Intergenic	AluSq2|SINE|Alu	77481	NR_073509	100287072	Hs.676308	NR_073509		LOC100287072	-	ribosomal protein S6 kinase B1 pseudogene	pseudo	22.4	1.94	11.54639175	8.00E-13
chr17-1783	chr17	20805516	20806516	+	14.7	1000	"non-coding (NR_104185, exon 3 of 3)"	"non-coding (NR_104185, exon 3 of 3)"	-6563	NM_001004306	339184	Hs.674830	NM_001004306	ENSG00000205212	CCDC144NL	-	"coiled-coil domain containing 144 family, N-terminal like"	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr17-1788	chr17	21262952	21263952	+	15.4	1000	Intergenic	Intergenic	-16247	NM_021012	3768	Hs.200629	NM_021012	ENSG00000184185	KCNJ12	IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x	potassium voltage-gated channel subfamily J member 12	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr17-1792	chr17	21346835	21347835	+	16.6	1000	Intergenic	Tigger1|DNA|TcMar-Tigger	38887	NM_001194958	100134444	Hs.200629	NM_001194958	ENSG00000260458	KCNJ18	KIR2.6|TTPP2	potassium voltage-gated channel subfamily J member 18	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr17-1802	chr17	26631695	26634614	+	48	2919	"non-coding (NR_028334, exon 2 of 3)"	"non-coding (NR_028334, exon 2 of 3)"	1254	NR_028334	284085	Hs.371796	NM_173624	ENSG00000265480	KRT18P55	-	keratin 18 pseudogene 55	pseudo	48.01	6.8	7.060294118	2.78E-19
chr17-1803	chr17	26838309	26839309	+	15.4	1000	Intergenic	Intergenic	-12150	NM_003593	8456	Hs.58611	NM_003593	ENSG00000109101	FOXN1	FKHL20|RONU|WHN	forkhead box N1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr17-1804	chr17	27331178	27332588	+	24.3	1410	"intron (NM_001290202, intron 1 of 16)"	"intron (NM_001290202, intron 1 of 16)"	1198	NM_001098635	124925	Hs.21837	NM_178860	ENSG00000063015	SEZ6	BSRPC	seizure related 6 homolog	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr17-1805	chr17	27892981	27894362	+	20.5	1381	"exon (NM_198147, exon 1 of 2)"	"exon (NM_198147, exon 1 of 2)"	371	NM_198147	116236	Hs.106510	NM_198147	ENSG00000168792	ABHD15	-	abhydrolase domain containing 15	protein-coding	20.48	1.46	14.02739726	1.29E-13
chr17-1806	chr17	29807676	29809701	+	34.6	2025	"intron (NM_032932, intron 3 of 14)"	"intron (NM_032932, intron 3 of 14)"	-6331	NM_001346749	84440	Hs.406788	NM_032932	ENSG00000131242	RAB11FIP4	FIP4-Rab11|RAB11-FIP4	RAB11 family interacting protein 4	protein-coding	34.56	5.82	5.93814433	6.75E-13
chr17-1808	chr17	30862480	30863480	+	16.6	1000	"intron (NM_015194, intron 21 of 21)"	"intron (NM_015194, intron 21 of 21)"	48875	NM_003885	8851	Hs.500015	NM_003885	ENSG00000176749	CDK5R1	CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a	cyclin dependent kinase 5 regulatory subunit 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr17-1811	chr17	30952979	30953979	+	16.6	1000	"intron (NM_001303279, intron 20 of 21)"	"intron (NM_001303279, intron 20 of 21)"	139374	NM_003885	8851	Hs.500015	NM_003885	ENSG00000176749	CDK5R1	CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a	cyclin dependent kinase 5 regulatory subunit 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr17-1812	chr17	30987878	30989472	+	26.9	1594	"intron (NM_001303279, intron 16 of 21)"	AluJb|SINE|Alu	174570	NM_003885	8851	Hs.500015	NM_003885	ENSG00000176749	CDK5R1	CDK5P35|CDK5R|NCK5A|p23|p25|p35|p35nck5a	cyclin dependent kinase 5 regulatory subunit 1	protein-coding	26.88	2.91	9.237113402	7.03E-14
chr17-1814	chr17	31342340	31343340	+	14.7	1000	"intron (NM_183377, intron 9 of 9)"	"intron (NM_183377, intron 9 of 9)"	22971	NM_001317225	124912	Hs.434112	NM_173847	ENSG00000141316	SPACA3	ALLP17|CT54|LYC3|LYZC|LYZL3|SLLP1	sperm acrosome associated 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr17-1815	chr17	31345818	31346818	+	16.6	1000	"intron (NM_183377, intron 7 of 9)"	(TG)n|Simple_repeat|Simple_repeat	26449	NM_001317225	124912	Hs.434112	NM_173847	ENSG00000141316	SPACA3	ALLP17|CT54|LYC3|LYZC|LYZL3|SLLP1	sperm acrosome associated 3	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr17-1817	chr17	31428120	31429120	+	16	1000	"intron (NM_183377, intron 2 of 9)"	"intron (NM_183377, intron 2 of 9)"	108751	NM_001317225	124912	Hs.434112	NM_173847	ENSG00000141316	SPACA3	ALLP17|CT54|LYC3|LYZC|LYZL3|SLLP1	sperm acrosome associated 3	protein-coding	16	0	16.4818808	1.26E-14
chr17-1818	chr17	31575203	31576575	+	24.3	1372	"intron (NM_001094, intron 1 of 9)"	MLT1D|LTR|ERVL-MaLR	44117	NM_183377	40	Hs.368417	NM_001094	ENSG00000108684	ASIC2	ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1	acid sensing ion channel subunit 2	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr17-1821	chr17	31836573	31837573	+	14.7	1000	"intron (NM_001094, intron 1 of 9)"	MIR3|SINE|MIR	23706	NR_037584	100506677	Hs.652571	NR_037584	ENSG00000265544	AA06	AA02|AA04|AA05	uncharacterized LOC100506677	pseudo	14.72	1.94	7.587628866	6.14E-07
chr17-1822	chr17	32654882	32655882	+	15.4	1000	Intergenic	L1M5|LINE|L1	9316	NM_005623	6355	Hs.271387	NM_005623	ENSG00000108700	CCL8	HC14|MCP-2|MCP2|SCYA10|SCYA8	C-C motif chemokine ligand 8	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr17-1823	chr17	32676422	32677422	+	16.6	1000	Intergenic	L1M1|LINE|L1	-6549	NM_005408	6357	Hs.414629	NM_005408	ENSG00000181374	CCL13	CKb10|MCP-4|NCC-1|NCC1|SCYA13|SCYL1	C-C motif chemokine ligand 13	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr17-1824	chr17	32801520	32802520	+	14.7	1000	Intergenic	MIRc|SINE|MIR	104368	NM_207454	400591	Hs.514090	NM_207454		C17orf102	-	chromosome 17 open reading frame 102	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr17-1826	chr17	32929050	32930050	+	16.6	1000	"intron (NM_001304438, intron 1 of 8)"	"intron (NM_001304438, intron 1 of 8)"	21782	NM_001304438	124842	Hs.310482	NM_207313	ENSG00000181291	TMEM132E	DFNB99	transmembrane protein 132E	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr17-1828	chr17	32963462	32964462	+	16	1000	"intron (NM_001304438, intron 8 of 8)"	"intron (NM_001304438, intron 8 of 8)"	56194	NM_001304438	124842	Hs.310482	NM_207313	ENSG00000181291	TMEM132E	DFNB99	transmembrane protein 132E	protein-coding	16	2.91	5.498281787	4.98E-06
chr17-1829	chr17	32966489	32968019	+	21.8	1530	TTS (NM_001304438)	TTS (NM_001304438)	59486	NM_001304438	124842	Hs.310482	NM_207313	ENSG00000181291	TMEM132E	DFNB99	transmembrane protein 132E	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr17-1832	chr17	33230669	33231669	+	16.6	1000	Intergenic	Intergenic	57359	NM_006584	10693	Hs.73072	NM_006584	ENSG00000132141	CCT6B	CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303	chaperonin containing TCP1 subunit 6B	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr17-1834	chr17	33816351	33818005	+	23.7	1654	Intergenic	Intergenic	-2420	NM_001195790	100506736	Hs.447559	NM_001145027	ENSG00000205045	SLFN12L	-	schlafen family member 12 like	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr17-1836	chr17	34307960	34308960	+	15.4	1000	promoter-TSS (NM_004590)	promoter-TSS (NM_004590)	72	NM_004590	6360	Hs.10458	NM_004590	ENSG00000275152	CCL16	CKb12|HCC-4|ILINCK|LCC-1|LEC|LMC|Mtn-1|NCC-4|NCC4|SCYA16|SCYL4	C-C motif chemokine ligand 16	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr17-1839	chr17	34998222	34999222	+	16.6	1000	Intergenic	CpG	40697	NM_024864	79922	Hs.194864	NM_024864	ENSG00000278619	MRM1	-	mitochondrial rRNA methyltransferase 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr17-1840	chr17	35125403	35126403	+	16.6	1000	Intergenic	Intergenic	167878	NM_024864	79922	Hs.194864	NM_024864	ENSG00000278619	MRM1	-	mitochondrial rRNA methyltransferase 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr17-1841	chr17	35171939	35172939	+	16	1000	Intergenic	Intergenic	121521	NR_135669	102723471	Hs.567930	NR_135668	ENSG00000277268	LOC102723471	-	uncharacterized LOC102723471	ncRNA	16	3.88	4.12371134	7.91E-05
chr17-1842	chr17	35246162	35247162	+	16.6	1000	"intron (NR_135671, intron 1 of 2)"	"intron (NR_135671, intron 1 of 2)"	47298	NR_135669	102723471	Hs.567930	NR_135668	ENSG00000277268	LOC102723471	-	uncharacterized LOC102723471	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr17-1844	chr17	36044701	36048296	+	51.8	3595	TTS (NM_000458)	TTS (NM_000458)	-43005	NM_007010	11056	Hs.590937	NM_007010	ENSG00000278053	DDX52	HUSSY19|ROK1	DExD-box helicase 52	protein-coding	51.85	8.25	6.284848485	5.42E-19
chr17-1848	chr17	36184306	36185306	+	16.6	1000	Intergenic	Intergenic	59557	NR_024178	284100	Hs.434159	NM_001129906	ENSG00000276715	YWHAEP7	-	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 7	pseudo	16.64	2.91	5.718213058	8.60E-07
chr17-185	chr17	8024962	8028312	+	80	3350	"intron (NM_001165967, intron 1 of 3)"	CpG-10133	773	NM_032580	84667	Hs.434828	NM_032580	ENSG00000179111	HES7	SCDO4|bHLHb37	hes family bHLH transcription factor 7	protein-coding	80.01	7.77	10.2972973	2.84E-40
chr17-1853	chr17	36728436	36736626	+	128	8190	"intron (NM_025248, intron 2 of 18)"	"intron (NM_025248, intron 2 of 18)"	29652	NM_025248	80725	Hs.448872	NM_025248	ENSG00000277363	SRCIN1	P140|SNIP	SRC kinase signaling inhibitor 1	protein-coding	128.02	22.33	5.733094492	4.96E-42
chr17-1856	chr17	36835724	36836724	+	16	1000	Intergenic	AluSx|SINE|Alu	-5037	NM_001130677	100170841	Hs.445574	NM_001130677	ENSG00000273604	EPOP	C17orf96|PRR28	elongin BC and polycomb repressive complex 2 associated protein	protein-coding	16	0	16.4818808	1.26E-14
chr17-1859	chr17	37753967	37759375	+	122.9	5408	Intergenic	Intergenic	7504	NM_006160	4761	Hs.322431	NM_006160	ENSG00000171532	NEUROD2	NDRF|bHLHa1	neuronal differentiation 2	protein-coding	122.9	15.53	7.91371539	7.13E-52
chr17-1860	chr17	38618532	38620084	+	27.5	1552	Intergenic	Intergenic	19632	NM_001552	3487	Hs.462998	NM_001552	ENSG00000141753	IGFBP4	BP-4|HT29-IGFBP|IBP4|IGFBP-4	insulin like growth factor binding protein 4	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr17-1862	chr17	38848432	38850007	+	25	1575	Intergenic	Intergenic	10783	NM_019016	192666	Hs.87383	NM_019016	ENSG00000167916	KRT24	K24|KA24	keratin 24	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr17-1868	chr17	39153450	39154450	+	15.4	1000	Intergenic	L2c|LINE|L2	2188	NM_031959	83897	Hs.307026	NM_031959	ENSG00000212900	KRTAP3-2	KAP3.2|KRTAP3.2	keratin associated protein 3-2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr17-1871	chr17	41404600	41405600	+	16.6	1000	Intergenic	HERVK13-int|LTR|ERVK	-24038	NR_047479	100874261	Hs.546898	NR_047479	ENSG00000236383	LINC00854	TMEM106A-AS1	long intergenic non-protein coding RNA 854	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr17-1873	chr17	41656496	41657496	+	16.6	1000	Intergenic	Intergenic	-33196	NM_001079675	2118	Hs.434059	NM_001986	ENSG00000175832	ETV4	E1A-F|E1AF|PEA3|PEAS3	ETS variant 4	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr17-1880	chr17	41994740	41996269	+	23	1529	TTS (NR_026770)	TTS (NR_026770)	928	NR_026770	23591	Hs.721804	NR_026770	ENSG00000267496	FAM215A	APR-2|C17orf88|LINC00530	family with sequence similarity 215 member A (non-protein coding)	ncRNA	23.04	2.91	7.917525773	4.85E-11
chr17-1883	chr17	42383667	42384667	+	15.4	1000	"intron (NR_110802, intron 2 of 3)"	AluSx|SINE|Alu	1632	NR_110802	101926996	Hs.666688	NR_110802		RUNDC3A-AS1	-	RUNDC3A antisense RNA 1	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr17-1884	chr17	42627497	42628497	+	16	1000	Intergenic	AluJr|SINE|Alu	-6815	NM_001466	2535	Hs.142912	NM_001466	ENSG00000180340	FZD2	Fz2|fz-2|fzE2|hFz2	frizzled class receptor 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-1886	chr17	42669424	42670424	+	14.1	1000	Intergenic	AluJr|SINE|Alu	35112	NM_001466	2535	Hs.142912	NM_001466	ENSG00000180340	FZD2	Fz2|fz-2|fzE2|hFz2	frizzled class receptor 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr17-1895	chr17	45371963	45372963	+	16.6	1000	"intron (NM_000212, intron 10 of 14)"	"intron (NM_000212, intron 10 of 14)"	28516	NR_110881	102724508	Hs.661005	NR_110880	ENSG00000263293	THCAT158	-	thyroid cancer-associated transcript 158	ncRNA	16.64	1.46	11.39726027	2.99E-10
chr17-1896	chr17	45810654	45813312	+	41.6	2658	"intron (NM_013351, intron 1 of 5)"	(TG)n|Simple_repeat|Simple_repeat	1373	NM_013351	30009	Hs.272409	NM_013351	ENSG00000073861	TBX21	T-PET|T-bet|TBET|TBLYM	T-box 21	protein-coding	41.61	5.82	7.149484536	5.30E-17
chr17-1898	chr17	46098697	46102123	+	65.9	3426	Intergenic	Intergenic	14203	NR_029687	406943		NR_029687	ENSG00000207947	MIR152	MIRN152|mir-152	microRNA 152	ncRNA	65.93	10.68	6.173220974	1.76E-23
chr17-1900	chr17	46113346	46117138	+	63.4	3792	promoter-TSS (NR_029687)	promoter-TSS (NR_029687)	-74	NM_016429	51226	Hs.408434	NM_016429	ENSG00000005243	COPZ2	zeta2-COP	coatomer protein complex subunit zeta 2	protein-coding	63.37	10.68	5.933520599	6.50E-22
chr17-1918	chr17	46754992	46755992	+	16.6	1000	Intergenic	Intergenic	44390	NM_032391	84366	Hs.116467	NM_032391	ENSG00000159182	PRAC1	C17orf92|PRAC	prostate cancer susceptibility candidate 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr17-1919	chr17	46767349	46768349	+	16	1000	Intergenic	Intergenic	32033	NM_032391	84366	Hs.116467	NM_032391	ENSG00000159182	PRAC1	C17orf92|PRAC	prostate cancer susceptibility candidate 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr17-1924	chr17	46867257	46868257	+	14.7	1000	"intron (NM_001130918, intron 9 of 15)"	"intron (NM_001130918, intron 9 of 15)"	3929	NM_173623	284076	Hs.91930	NM_173623	ENSG00000170703	TTLL6	TTL.6	tubulin tyrosine ligase like 6	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-1926	chr17	47063747	47064747	+	16.6	1000	Intergenic	L1ME3E|LINE|L1	-10527	NM_006546	10642	Hs.144936	NM_006546	ENSG00000159217	IGF2BP1	CRD-BP|CRDBP|IMP-1|IMP1|VICKZ1|ZBP1	insulin like growth factor 2 mRNA binding protein 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr17-1929	chr17	47205101	47206101	+	16.6	1000	Intergenic	LTR19-int|LTR|ERV1	-4221	NM_001159388	124872	Hs.374679	NM_153446	ENSG00000167080	B4GALNT2	B4GALT|GALGT2	"beta-1,4-N-acetyl-galactosaminyltransferase 2"	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr17-1930	chr17	47247512	47248780	+	20.5	1268	TTS (NM_001159388)	TTS (NM_001159388)	37817	NM_153446	124872	Hs.374679	NM_153446	ENSG00000167080	B4GALNT2	B4GALT|GALGT2	"beta-1,4-N-acetyl-galactosaminyltransferase 2"	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr17-1931	chr17	47534658	47535922	+	19.8	1264	TTS (NR_110805)	TTS (NR_110805)	3821	NR_110805	101927207	Hs.638402	NR_110805	ENSG00000249497	LINC02075	-	long intergenic non-protein coding RNA 2075	ncRNA	19.84	4.85	4.090721649	1.08E-05
chr17-1934	chr17	47652684	47656445	+	52.5	3761	"intron (NM_007225, intron 1 of 1)"	"intron (NM_007225, intron 1 of 1)"	1266	NM_007225	11248	Hs.55069	NM_007225	ENSG00000182575	NXPH3	NPH3	neurexophilin 3	protein-coding	52.49	7.77	6.755469755	1.02E-20
chr17-1939	chr17	47979001	47981578	+	40.3	2577	Intergenic	Intergenic	-54910	NM_001077504	255061	Hs.652130	NM_170685	ENSG00000176358	TAC4	EK|HK-1|HK1|PPT-C	tachykinin 4 (hemokinin)	protein-coding	40.33	4.85	8.315463918	2.73E-18
chr17-194	chr17	40911779	40914674	+	59.5	2895	promoter-TSS (NM_005854)	promoter-TSS (NM_005854)	14	NM_005854	10266	Hs.514193	NM_005854	ENSG00000131477	RAMP2	-	receptor activity modifying protein 2	protein-coding	59.53	7.77	7.661518662	5.01E-25
chr17-1942	chr17	48064771	48066514	+	28.2	1743	Intergenic	Intergenic	6946	NM_005220	1747	Hs.134194	NM_005220	ENSG00000064195	DLX3	AI4|TDO	distal-less homeobox 3	protein-coding	28.16	1.94	14.51546392	1.99E-18
chr17-1949	chr17	48389161	48392676	+	53.1	3515	Intergenic	L1ME5|LINE|L1	-25702	NR_125805	103752589	Hs.612913	NR_125805	ENSG00000251179	TMEM92-AS1	TCONS_00025237|lncRNA-508851	TMEM92 antisense RNA 1	ncRNA	53.13	11.65	4.560515021	8.89E-15
chr17-1950	chr17	48483102	48484368	+	16.6	1266	Intergenic	Intergenic	-8821	NM_018509	55379	Hs.370927	NM_018509	ENSG00000108829	LRRC59	PRO1855|p34	leucine rich repeat containing 59	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr17-1952	chr17	48688568	48690529	+	33.3	1961	"intron (NM_001256325, intron 26 of 35)"	"intron (NM_001256325, intron 26 of 35)"	-22670	NM_001144070	8714	Hs.463421	NM_003786	ENSG00000108846	ABCC3	ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2	ATP binding cassette subfamily C member 3	protein-coding	33.28	3.4	9.788235294	2.03E-17
chr17-1956	chr17	48842990	48843990	+	16.6	1000	"intron (NR_073199, intron 2 of 3)"	"intron (NR_073199, intron 2 of 3)"	1386	NR_073199	55018	Hs.389460	NM_017928	ENSG00000167117	LINC00483	C17orf73	long intergenic non-protein coding RNA 483	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr17-1957	chr17	48868935	48869935	+	15.4	1000	Intergenic	MLT1J1-int|LTR|ERVL-MaLR	23424	NR_107026	102466918		NR_107026	ENSG00000278672	MIR8059	hsa-mir-8059	microRNA 8059	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr17-1960	chr17	53617414	53618414	+	16	1000	Intergenic	L3|LINE|CR1	-118573	NM_012329	23531	Hs.463483	NM_012329	ENSG00000108960	MMD	MMA|MMD1|PAQR11	monocyte to macrophage differentiation associated	protein-coding	16	2.91	5.498281787	4.98E-06
chr17-1963	chr17	55793921	55794921	+	15.4	1000	Intergenic	Intergenic	28269	NM_001282544	101927581	Hs.540784	NM_001282544	ENSG00000166329	CCDC182	-	coiled-coil domain containing 182	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr17-1967	chr17	56003784	56005327	+	25.6	1543	"intron (NM_001271875, intron 1 of 10)"	"intron (NM_001271875, intron 1 of 10)"	-23805	NM_001292025	404093	Hs.46679	NM_001271875	ENSG00000180891	CUEDC1	-	CUE domain containing 1	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr17-1969	chr17	56037406	56038406	+	16	1000	Intergenic	AluJo|SINE|Alu	-5222	NM_001271875	404093	Hs.46679	NM_001271875	ENSG00000180891	CUEDC1	-	CUE domain containing 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-1971	chr17	56368402	56369402	+	15.4	1000	Intergenic	L1M5|LINE|L1	-10606	NM_000250	4353	Hs.458272	NM_000250	ENSG00000005381	MPO	-	myeloperoxidase	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr17-1975	chr17	59478575	59490114	+	189.5	11539	"intron (NM_005994, intron 6 of 6)"	"intron (NM_005994, intron 6 of 6)"	-4768	NM_203425	388407	Hs.434459	NM_203425		C17orf82	-	chromosome 17 open reading frame 82	protein-coding	189.46	33.49	5.657211108	1.35E-60
chr17-1979	chr17	59573081	59574662	+	25	1581	Intergenic	Intergenic	40022	NM_018488	9496	Hs.143907	NM_018488	ENSG00000121075	TBX4	ICPPS|SPS	T-box 4	protein-coding	24.96	4.37	5.711670481	4.38E-09
chr17-1980	chr17	60153733	60155356	+	26.2	1623	Intergenic	AluJb|SINE|Alu	-11901	NM_005121	9969	Hs.282678	NM_005121	ENSG00000108510	MED13	ARC250|DRIP250|HSPC221|THRAP1|TRAP240	mediator complex subunit 13	protein-coding	26.24	5.34	4.913857678	2.00E-08
chr17-1982	chr17	61552757	61554426	+	23	1669	promoter-TSS (NM_000789)	promoter-TSS (NM_000789)	-831	NM_000789	1636	Hs.298469	NM_000789	ENSG00000159640	ACE	ACE1|CD143|DCP|DCP1	angiotensin I converting enzyme	protein-coding	23.04	4.37	5.272311213	2.46E-08
chr17-1988	chr17	63367697	63368697	+	16	1000	Intergenic	Intergenic	-85462	NR_131984	105827617		NR_131984	ENSG00000263520	CRAT40	-	cervical cancer-associated transcript 40	ncRNA	16	3.4	4.705882353	2.25E-05
chr17-1990	chr17	63510700	63511700	+	16	1000	Intergenic	Intergenic	46540	NM_004655	8313	Hs.156527	NM_004655	ENSG00000168646	AXIN2	AXIL|ODCRCS	axin 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr17-1991	chr17	63601138	63602138	+	16	1000	Intergenic	Intergenic	-43898	NM_004655	8313	Hs.156527	NM_004655	ENSG00000168646	AXIN2	AXIL|ODCRCS	axin 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr17-1993	chr17	64450804	64452376	+	26.2	1572	"intron (NM_002737, intron 2 of 16)"	"intron (NM_002737, intron 2 of 16)"	-38618	NR_110822	101928001	Hs.650730	NR_110822		PRKCA-AS1	-	PRKCA antisense RNA 1	ncRNA	26.24	4.85	5.410309278	4.26E-09
chr17-1996	chr17	64934741	64935741	+	15.4	1000	Intergenic	Intergenic	-25739	NM_014405	27092	Hs.514423	NM_014405	ENSG00000075461	CACNG4	-	calcium voltage-gated channel auxiliary subunit gamma 4	protein-coding	15.36	0	15.82260557	1.26E-14
chr17-1998	chr17	66598403	66599403	+	16	1000	Intergenic	Intergenic	-1808	NM_017565	54757	Hs.268874	NM_017565	ENSG00000108950	FAM20A	AI1G|AIGFS|FP2747	"FAM20A, golgi associated secretory pathway pseudokinase"	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-2001	chr17	68662337	68663337	+	16	1000	Intergenic	Intergenic	497161	NM_000891	3759	Hs.1547	NM_000891	ENSG00000123700	KCNJ2	ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3	potassium voltage-gated channel subfamily J member 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr17-2005	chr17	71255886	71256886	+	16.6	1000	"intron (NM_001129885, intron 2 of 5)"	"intron (NM_001129885, intron 2 of 5)"	1633	NM_001129885	642843	Hs.534707	NM_001129885	ENSG00000187959	CPSF4L	-	cleavage and polyadenylation specific factor 4 like	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr17-2007	chr17	71467511	71475378	+	106.9	7867	"intron (NM_001144952, intron 2 of 44)"	AluSx1|SINE|Alu	-38378	NR_135635	101928251	Hs.434726	NR_135635	ENSG00000264985	LOC101928251	-	uncharacterized LOC101928251	ncRNA	106.89	23.78	4.494953743	5.91E-28
chr17-2014	chr17	71772716	71773716	+	15.4	1000	"intron (NR_027146, intron 2 of 3)"	"intron (NR_027146, intron 2 of 3)"	-9745	NR_040020	400620	Hs.348644	NR_040020	ENSG00000234721	LINC02092	-	long intergenic non-protein coding RNA 2092	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr17-2015	chr17	71784737	71785737	+	16	1000	"intron (NR_040020, intron 1 of 6)"	LTR40b|LTR|ERVL	2276	NR_040020	400620	Hs.348644	NR_040020	ENSG00000234721	LINC02092	-	long intergenic non-protein coding RNA 2092	ncRNA	16	3.4	4.705882353	2.25E-05
chr17-2016	chr17	71817774	71818774	+	16	1000	"intron (NR_027146, intron 2 of 3)"	"intron (NR_027146, intron 2 of 3)"	6402	NR_027146	283982	Hs.464079	NM_182564		LINC00469	C17orf54	long intergenic non-protein coding RNA 469	ncRNA	16	2.43	6.58436214	7.90E-07
chr17-2023	chr17	72093285	72094285	+	16	1000	Intergenic	MLT1K|LTR|ERVL-MaLR	-106010	NM_000999	6169	Hs.380953	NM_000999	ENSG00000172809	RPL38	L38	ribosomal protein L38	protein-coding	16	3.4	4.705882353	2.25E-05
chr17-2025	chr17	72169855	72170855	+	16	1000	Intergenic	LTR50|LTR|ERVL	-29440	NM_000999	6169	Hs.380953	NM_000999	ENSG00000172809	RPL38	L38	ribosomal protein L38	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-2027	chr17	72179250	72180250	+	16.6	1000	Intergenic	Intergenic	-20045	NM_000999	6169	Hs.380953	NM_000999	ENSG00000172809	RPL38	L38	ribosomal protein L38	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr17-2030	chr17	72362913	72363913	+	16	1000	promoter-TSS (NM_001331077)	promoter-TSS (NM_001331077)	-232	NM_181790	350383	Hs.574368	NM_181790	ENSG00000257008	GPR142	GPRg1b|PGR2	G protein-coupled receptor 142	protein-coding	16	2.91	5.498281787	4.98E-06
chr17-2036	chr17	72854625	72857154	+	53.1	2529	"non-coding (NR_103735, exon 1 of 13)"	"non-coding (NR_103735, exon 1 of 13)"	118	NR_103735	2905	Hs.436980	NM_000835	ENSG00000161509	GRIN2C	GluN2C|NMDAR2C|NR2C	glutamate ionotropic receptor NMDA type subunit 2C	protein-coding	53.13	1.94	27.38659794	1.77E-43
chr17-2037	chr17	72873813	72874813	+	16.6	1000	"3' UTR (NM_178128, exon 7 of 7)"	"3' UTR (NM_178128, exon 7 of 7)"	-5157	NR_047576	2232	Hs.69745	NM_004110	ENSG00000161513	FDXR	ADXR	ferredoxin reductase	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr17-2044	chr17	74679661	74681014	+	21.1	1353	"intron (NM_001008529, intron 3 of 4)"	"intron (NM_001008529, intron 3 of 4)"	4632	NR_130928	439921	Hs.250723	NM_198530	ENSG00000182534	MXRA7	PS1TP1|TMAP1	matrix remodeling associated 7	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr17-2046	chr17	74896212	74897212	+	16	1000	"intron (NM_198955, intron 2 of 15)"	MLT1C|LTR|ERVL-MaLR	27983	NM_198955	146664	Hs.144531	NM_144677	ENSG00000167889	MGAT5B	GnT-IX|GnT-VB	"mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B"	protein-coding	16	2.91	5.498281787	4.98E-06
chr17-2050	chr17	75250503	75251503	+	14.7	1000	Intergenic	Intergenic	-26489	NM_001113491	10801	Hs.440932	NM_006640	ENSG00000184640	9-Sep	AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1	septin 9	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-2055	chr17	76583057	76584057	+	16	1000	Intergenic	PRIMA4_LTR|LTR|ERV1	-10081	NM_173628	8632	Hs.375975	NM_003727	ENSG00000187775	DNAH17	DNAHL1|DNEL2	dynein axonemal heavy chain 17	protein-coding	16	0.97	16.49484536	3.54E-11
chr17-2058	chr17	77203397	77204824	+	22.4	1427	"intron (NM_001082575, intron 4 of 14)"	"intron (NM_001082575, intron 4 of 14)"	133091	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr17-2060	chr17	77216765	77219240	+	36.5	2475	"intron (NM_001082575, intron 4 of 14)"	"intron (NM_001082575, intron 4 of 14)"	146983	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	36.48	4.37	8.347826087	1.03E-16
chr17-2063	chr17	77251633	77255144	+	49.3	3511	"intron (NM_001082575, intron 3 of 14)"	"intron (NM_001082575, intron 3 of 14)"	182369	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	49.29	5.34	9.230337079	1.22E-23
chr17-2067	chr17	77310666	77315916	+	69.8	5250	"intron (NM_001082575, intron 2 of 14)"	MIRb|SINE|MIR	198939	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	69.77	11.16	6.251792115	5.17E-25
chr17-2077	chr17	77670668	77671668	+	16.6	1000	Intergenic	LTR1|LTR|ERV1	9890	NR_039893	100616170		NR_039893	ENSG00000266665	MIR4739	mir-4739	microRNA 4739	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr17-2078	chr17	77710766	77714995	+	67.8	4229	"intron (NM_178543, intron 5 of 5)"	L2a|LINE|L2	8015	NM_178543	339221	Hs.114084	NM_178543	ENSG00000182156	ENPP7	ALK-SMase|E-NPP 7|NPP-7|NPP7	ectonucleotide pyrophosphatase/phosphodiesterase 7	protein-coding	67.85	12.13	5.593569662	1.27E-22
chr17-208	chr17	56232157	56233470	+	25.6	1313	"exon (NM_012374, exon 1 of 1)"	"exon (NM_012374, exon 1 of 1)"	298	NM_012374	26689	Hs.531188	NM_012374	ENSG00000141194	OR4D1	OR17-23|OR4D3|OR4D4P|TPCR16	olfactory receptor family 4 subfamily D member 1	protein-coding	25.6	5.34	4.794007491	2.00E-08
chr17-2081	chr17	77720688	77721940	+	16.6	1252	Intergenic	CpG	16449	NM_178543	339221	Hs.114084	NM_178543	ENSG00000182156	ENPP7	ALK-SMase|E-NPP 7|NPP-7|NPP7	ectonucleotide pyrophosphatase/phosphodiesterase 7	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr17-2087	chr17	77823042	77824042	+	16	1000	Intergenic	Intergenic	-10329	NM_003655	8535	Hs.405046	NM_003655	ENSG00000141582	CBX4	NBP16|PC2	chromobox 4	protein-coding	16	1.94	8.24742268	7.67E-08
chr17-2089	chr17	77877094	77879675	+	39.7	2581	Intergenic	ERV3-16A3_I-int|LTR|ERVL	-14772	NR_110851	101928738	Hs.399280	NR_110851	ENSG00000262188	LINC01978	-	long intergenic non-protein coding RNA 1978	ncRNA	39.69	6.8	5.836764706	2.14E-14
chr17-2090	chr17	77884161	77885690	+	26.2	1529	Intergenic	Intergenic	-8231	NR_110851	101928738	Hs.399280	NR_110851	ENSG00000262188	LINC01978	-	long intergenic non-protein coding RNA 1978	ncRNA	26.24	4.85	5.410309278	4.26E-09
chr17-2092	chr17	77961792	77962792	+	16.6	1000	"intron (NM_019020, intron 3 of 11)"	"intron (NM_019020, intron 3 of 11)"	-37636	NM_001271846	125058	Hs.369819	NM_019020	ENSG00000167291	TBC1D16	-	TBC1 domain family member 16	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr17-2094	chr17	78002687	78004504	+	25	1817	"intron (NM_019020, intron 1 of 11)"	MLT1D|LTR|ERVL-MaLR	6062	NM_019020	125058	Hs.369819	NM_019020	ENSG00000167291	TBC1D16	-	TBC1 domain family member 16	protein-coding	24.96	2.91	8.577319588	5.77E-12
chr17-2101	chr17	78404661	78405661	+	16.6	1000	TTS (NM_001164638)	TTS (NM_001164638)	11943	NR_039883	100616359		NR_039883	ENSG00000264961	MIR4730	-	microRNA 4730	ncRNA	16.64	0	17.14115603	3.68E-16
chr17-2102	chr17	78431253	78432521	+	16.6	1268	Intergenic	Intergenic	18517	NM_002522	4884	Hs.514556	NM_002522	ENSG00000171246	NPTX1	NP1	neuronal pentraxin 1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr17-2104	chr17	78499983	78501468	+	17.9	1485	Intergenic	Intergenic	-17900	NM_020761	57521	Hs.133044	NM_020761	ENSG00000141564	RPTOR	KOG1|Mip1	regulatory associated protein of MTOR complex 1	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr17-2109	chr17	79290509	79291509	+	16	1000	"intron (NM_178520, intron 1 of 2)"	AluSx1|SINE|Alu	-7961	NR_038080	284185	Hs.631762	NM_178519		LINC00482	C17orf55	long intergenic non-protein coding RNA 482	ncRNA	16	3.4	4.705882353	2.25E-05
chr17-211	chr17	74876143	74877397	+	26.2	1254	"intron (NM_198955, intron 1 of 15)"	LTR16C|LTR|ERVL	8041	NM_198955	146664	Hs.144531	NM_144677	ENSG00000167889	MGAT5B	GnT-IX|GnT-VB	"mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B"	protein-coding	26.24	1.94	13.5257732	4.03E-16
chr17-2111	chr17	79302028	79306110	+	78.1	4082	"5' UTR (NM_178520, exon 1 of 3)"	"5' UTR (NM_178520, exon 1 of 3)"	405	NM_178520	284186	Hs.364191	NM_178520	ENSG00000185332	TMEM105	-	transmembrane protein 105	protein-coding	78.09	8.25	9.465454545	8.09E-38
chr17-2113	chr17	79309007	79310007	+	16	1000	Intergenic	Intergenic	-5033	NM_178520	284186	Hs.364191	NM_178520	ENSG00000185332	TMEM105	-	transmembrane protein 105	protein-coding	16	1.94	8.24742268	7.67E-08
chr17-2115	chr17	79337180	79338881	+	32	1701	Intergenic	MLT1C|LTR|ERVL-MaLR	20895	NM_001347841	100130370	Hs.646594	NM_001272086		LOC100130370	-	uncharacterized LOC100130370	protein-coding	32	6.8	4.705882353	5.32E-10
chr17-2122	chr17	81019689	81020689	+	15.4	1000	Intergenic	Intergenic	-10503	NM_001320742	146712	Hs.607824	NM_001009905	ENSG00000175711	B3GNTL1	3-Gn-T8|B3GNT8|BGnT-8|beta-1|beta3Gn-T8|beta3GnTL1	"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr17-2128	chr17	8974	13965	+	77.4	4991	"intron (NM_003585, intron 4 of 5)"	"intron (NM_003585, intron 4 of 5)"	19952	NM_003585	8447	Hs.551705	NM_003585	ENSG00000272636	DOC2B	DOC2BL	double C2 domain beta	protein-coding	77.45	10.68	7.251872659	6.24E-31
chr17-2132	chr17	746912	748294	+	20.5	1382	"intron (NM_022463, intron 1 of 7)"	"intron (NM_022463, intron 1 of 7)"	19748	NM_001205319	64359	Hs.527989	NM_022463	ENSG00000167693	NXN	NRX|TRG-4	nucleoredoxin	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr17-2133	chr17	807531	808531	+	15.4	1000	"intron (NM_022463, intron 1 of 7)"	AluSx|SINE|Alu	-4841	NR_135633	101927727	Hs.666198	NR_135633	ENSG00000262003	LOC101927727	-	uncharacterized LOC101927727	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr17-2135	chr17	1130585	1133982	+	63.4	3397	"exon (NM_001322841, exon 1 of 23)"	"exon (NM_001322841, exon 1 of 23)"	691	NM_001322842	29	Hs.159306	NM_001092	ENSG00000159842	ABR	MDB	active BCR-related	protein-coding	63.37	6.8	9.319117647	3.03E-30
chr17-2136	chr17	1608234	1609234	+	16	1000	"3' UTR (NM_001164407, exon 4 of 4)"	"3' UTR (NM_001164407, exon 4 of 4)"	4928	NM_001164407	727910	Hs.531005	NM_001164407	ENSG00000185561	TLCD2	-	TLC domain containing 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-2139	chr17	3065560	3066560	+	15.4	1000	Intergenic	L2c|LINE|L2	-34751	NM_012352	26189	Hs.532660	NM_012352	ENSG00000172150	OR1A2	OR17-6	olfactory receptor family 1 subfamily A member 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr17-2144	chr17	4492019	4498449	+	99.2	6430	"intron (NM_001114974, intron 1 of 7)"	"intron (NM_001114974, intron 1 of 7)"	7400	NM_001114974	342527	Hs.441709	NM_198501	ENSG00000188176	SMTNL2	-	smoothelin like 2	protein-coding	99.21	16.02	6.192883895	9.43E-35
chr17-2156	chr17	6597149	6598149	+	15.4	1000	"intron (NM_177550, intron 7 of 11)"	"intron (NM_177550, intron 7 of 11)"	19091	NM_001284509	284111	Hs.399496	NM_177550	ENSG00000141485	SLC13A5	EIEE25|NACT|mIndy	solute carrier family 13 member 5	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr17-2157	chr17	6945058	6947809	+	49.9	2751	"intron (NM_153357, intron 1 of 3)"	CpG-10064	809	NM_153357	162515	Hs.336564	NM_153357	ENSG00000174326	SLC16A11	MCT11	solute carrier family 16 member 11	protein-coding	49.93	8.74	5.712814645	2.17E-17
chr17-2158	chr17	6974872	6975872	+	14.7	1000	Intergenic	(CTGGGG)n|Simple_repeat|Simple_repeat	8254	NM_006344	10462	Hs.54403	NM_006344	ENSG00000132514	CLEC10A	CD301|CLECSF13|CLECSF14|HML|HML2|MGL	C-type lectin domain family 10 member A	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr17-2159	chr17	7005441	7006441	+	15.4	1000	"intron (NM_001201352, intron 7 of 8)"	"intron (NM_001201352, intron 7 of 8)"	11688	NM_080914	433	Hs.654440	NM_001181	ENSG00000161944	ASGR2	ASGP-R2|ASGPR2|CLEC4H2|HBXBP|HL-2	asialoglycoprotein receptor 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr17-2160	chr17	7283618	7284618	+	15.4	1000	promoter-TSS (NM_003985)	promoter-TSS (NM_003985)	-175	NM_001251902	8711	Hs.203420	NM_003985	ENSG00000174292	TNK1	-	tyrosine kinase non receptor 1	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr17-2161	chr17	7549485	7552244	+	33.9	2759	"intron (NM_001303263, intron 1 of 5)"	AluSg|SINE|Alu	919	NM_001303263	482	Hs.643540	NM_001678	ENSG00000129244	ATP1B2	AMOG	ATPase Na+/K+ transporting subunit beta 2	protein-coding	33.92	6.8	4.988235294	1.08E-10
chr17-2166	chr17	7925594	7926594	+	15.4	1000	Intergenic	Intergenic	-16264	NM_001039131	247	Hs.111256	NM_001141	ENSG00000179593	ALOX15B	15-LOX-2	"arachidonate 15-lipoxygenase, type B"	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr17-2167	chr17	7932047	7933047	+	14.7	1000	Intergenic	Intergenic	-9811	NM_001039131	247	Hs.111256	NM_001141	ENSG00000179593	ALOX15B	15-LOX-2	"arachidonate 15-lipoxygenase, type B"	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr17-2168	chr17	7990636	7991636	+	15.4	1000	promoter-TSS (NR_036201)	promoter-TSS (NR_036201)	-115	NM_001139	242	Hs.136574	NM_001139	ENSG00000179477	ALOX12B	12R-LOX|ARCI2	"arachidonate 12-lipoxygenase, 12R type"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr17-2169	chr17	8033577	8034577	+	14.7	1000	Intergenic	AluY|SINE|Alu	-6667	NM_001165967	84667	Hs.434828	NM_032580	ENSG00000179111	HES7	SCDO4|bHLHb37	hes family bHLH transcription factor 7	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr17-2172	chr17	8905657	8906657	+	14.1	1000	Intergenic	Intergenic	-18702	NM_004822	9423	Hs.660885	NM_004822	ENSG00000065320	NTN1	NTN1L	netrin 1	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr17-2174	chr17	8976591	8977899	+	19.8	1308	"intron (NM_004822, intron 2 of 6)"	"intron (NM_004822, intron 2 of 6)"	52386	NM_004822	9423	Hs.660885	NM_004822	ENSG00000065320	NTN1	NTN1L	netrin 1	protein-coding	19.84	1.46	13.5890411	1.82E-12
chr17-2181	chr17	10293240	10294240	+	16	1000	TTS (NM_002472)	TTS (NM_002472)	7291	NR_125367	100128560	Hs.661174	NR_125367		MYHAS	-	myosin heavy chain gene cluster antisense RNA	ncRNA	16	2.43	6.58436214	7.90E-07
chr17-2191	chr17	11669868	11670868	+	16	1000	"intron (NM_001372, intron 36 of 68)"	"intron (NM_001372, intron 36 of 68)"	-115851	NM_004662	1770	Hs.567259	NM_001372	ENSG00000007174	DNAH9	DNAH17L|DNEL1|DYH9|Dnahc9|HL-20|HL20	dynein axonemal heavy chain 9	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-2192	chr17	12537920	12538920	+	15.4	1000	"non-coding (NR_034144, exon 3 of 3)"	"non-coding (NR_034144, exon 3 of 3)"	-30787	NM_153604	93649	Hs.462257	NM_153604	ENSG00000141052	MYOCD	MYCD	myocardin	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr17-2193	chr17	13639435	13640435	+	14.1	1000	Intergenic	Intergenic	-134676	NM_006042	9955	Hs.462270	NM_006042	ENSG00000153976	HS3ST3A1	3-OST-3A|3OST3A1	heparan sulfate-glucosamine 3-sulfotransferase 3A1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr17-2195	chr17	15220053	15221053	+	15.4	1000	"intron (NM_031898, intron 5 of 8)"	"intron (NM_031898, intron 5 of 8)"	24405	NM_031898	64518	Hs.414648	NM_031898	ENSG00000125409	TEKT3	-	tektin 3	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr17-2201	chr17	17878925	17879925	+	15.4	1000	"intron (NM_031294, intron 2 of 13)"	"intron (NM_031294, intron 2 of 13)"	3298	NM_001130092	83450	Hs.579264	NM_031294	ENSG00000171962	DRC3	CFAP134|LRRC48	dynein regulatory complex subunit 3	protein-coding	15.36	0	15.82260557	1.26E-14
chr17-2209	chr17	19489117	19490117	+	15.4	1000	Intergenic	AluSx1|SINE|Alu	28744	NR_003025	677885	Hs.658450	NR_003025	ENSG00000239149	SNORA59A	ACA59	"small nucleolar RNA, H/ACA box 59A"	snoRNA	15.36	2.43	6.320987654	7.90E-07
chr17-2212	chr17	19912722	19913722	+	15.4	1000	"intron (NM_001243439, intron 1 of 14)"	CpG	573	NM_001243439	92521	Hs.431045	NM_152904	ENSG00000128487	SPECC1	CYTSB|HCMOGT-1|HCMOGT1|NSP	sperm antigen with calponin homology and coiled-coil domains 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr17-2213	chr17	19981893	19982893	+	14.1	1000	"intron (NM_001243439, intron 1 of 14)"	"intron (NM_001243439, intron 1 of 14)"	-7942	NM_001033553	92521	Hs.431045	NM_152904	ENSG00000128487	SPECC1	CYTSB|HCMOGT-1|HCMOGT1|NSP	sperm antigen with calponin homology and coiled-coil domains 1	protein-coding	14.08	0.49	28.73469388	3.99E-13
chr17-2219	chr17	21253328	21254328	+	14.7	1000	Intergenic	Intergenic	-25871	NM_021012	3768	Hs.200629	NM_021012	ENSG00000184185	KCNJ12	IRK-2|IRK2|KCNJN1|Kir2.2|Kir2.2v|hIRK|hIRK1|hkir2.2x|kcnj12x	potassium voltage-gated channel subfamily J member 12	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr17-2225	chr17	25784462	25788414	+	53.1	3952	Intergenic	Intergenic	-12598	NM_014238	8844	Hs.133534	NM_014238	ENSG00000141068	KSR1	KSR|RSU2	kinase suppressor of ras 1	protein-coding	53.13	11.65	4.560515021	8.89E-15
chr17-2227	chr17	26107858	26108858	+	15.4	1000	"intron (NM_000625, intron 7 of 26)"	"intron (NM_000625, intron 7 of 26)"	19197	NM_000625	4843	Hs.709191	NM_000625	ENSG00000007171	NOS2	HEP-NOS|INOS|NOS|NOS2A	nitric oxide synthase 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr17-2228	chr17	26127282	26128538	+	21.1	1256	promoter-TSS (NM_000625)	promoter-TSS (NM_000625)	-355	NM_000625	4843	Hs.709191	NM_000625	ENSG00000007171	NOS2	HEP-NOS|INOS|NOS|NOS2A	nitric oxide synthase 2	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr17-2233	chr17	26791892	26792892	+	16	1000	Intergenic	MIR3|SINE|MIR	-8272	NM_001346683	9058	Hs.102307	NM_003984	ENSG00000007216	SLC13A2	NADC1|NaCT|NaDC-1|SDCT1	solute carrier family 13 member 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr17-2234	chr17	27297375	27298644	+	19.8	1269	"intron (NM_001290202, intron 3 of 16)"	"intron (NM_001290202, intron 3 of 16)"	-19501	NM_001290131	57649	Hs.444173	NM_020889	ENSG00000109118	PHF12	PF1	PHD finger protein 12	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr17-2238	chr17	30630393	30631393	+	16	1000	"intron (NM_001330181, intron 5 of 7)"	"intron (NM_001330181, intron 5 of 7)"	37698	NM_138328	162494	Hs.655027	NM_138328	ENSG00000141314	RHBDL3	RHBDL4|VRHO	rhomboid like 3	protein-coding	16	0.97	16.49484536	3.54E-11
chr17-2243	chr17	31189608	31190608	+	16	1000	"intron (NM_001303280, intron 1 of 10)"	"intron (NM_001303280, intron 1 of 10)"	14083	NM_001303279	4642	Hs.602063	NM_015194	ENSG00000176658	MYO1D	PPP1R108|myr4	myosin ID	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-2253	chr17	32876833	32877833	+	14.7	1000	Intergenic	L2c|LINE|L2	29055	NM_207454	400591	Hs.514090	NM_207454		C17orf102	-	chromosome 17 open reading frame 102	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-226	chr17	7554554	7556071	+	27.5	1517	"intron (NM_001678, intron 1 of 6)"	CpG	1104	NM_001678	482	Hs.643540	NM_001678	ENSG00000129244	ATP1B2	AMOG	ATPase Na+/K+ transporting subunit beta 2	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr17-2263	chr17	33097300	33100554	+	44.8	3254	Intergenic	Intergenic	189601	NM_006584	10693	Hs.73072	NM_006584	ENSG00000132141	CCT6B	CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303	chaperonin containing TCP1 subunit 6B	protein-coding	44.81	10.68	4.195692884	5.25E-12
chr17-2266	chr17	33127636	33128636	+	15.4	1000	Intergenic	ERV3-16A3_I-int|LTR|ERVL	160392	NM_006584	10693	Hs.73072	NM_006584	ENSG00000132141	CCT6B	CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303	chaperonin containing TCP1 subunit 6B	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr17-2268	chr17	33205006	33209200	+	48	4194	Intergenic	L1MEb|LINE|L1	81425	NM_006584	10693	Hs.73072	NM_006584	ENSG00000132141	CCT6B	CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303	chaperonin containing TCP1 subunit 6B	protein-coding	48.01	10.68	4.495318352	2.70E-13
chr17-2278	chr17	34298776	34299776	+	16	1000	Intergenic	Intergenic	9256	NM_004590	6360	Hs.10458	NM_004590	ENSG00000275152	CCL16	CKb12|HCC-4|ILINCK|LCC-1|LEC|LMC|Mtn-1|NCC-4|NCC4|SCYA16|SCYL4	C-C motif chemokine ligand 16	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-2281	chr17	35241493	35243164	+	26.2	1671	"intron (NR_135671, intron 1 of 2)"	"intron (NR_135671, intron 1 of 2)"	51632	NR_135669	102723471	Hs.567930	NR_135668	ENSG00000277268	LOC102723471	-	uncharacterized LOC102723471	ncRNA	26.24	3.88	6.762886598	1.00E-10
chr17-2285	chr17	35301617	35302617	+	16	1000	TTS (NM_005568)	TTS (NM_005568)	-4058	NM_012138	26574	Hs.195740	NM_012138	ENSG00000275700	AATF	BFR2|CHE-1|CHE1|DED	apoptosis antagonizing transcription factor	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-2294	chr17	36574372	36575372	+	15.4	1000	Intergenic	Intergenic	-9848	NM_001199417	57636	Hs.374446	NM_020876	ENSG00000275832	ARHGAP23	-	Rho GTPase activating protein 23	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr17-230	chr17	32972806	32976293	+	56.3	3487	Intergenic	Intergenic	66781	NM_001304438	124842	Hs.310482	NM_207313	ENSG00000181291	TMEM132E	DFNB99	transmembrane protein 132E	protein-coding	56.33	12.62	4.463549921	1.34E-15
chr17-2300	chr17	37822478	37824581	+	36.5	2103	promoter-TSS (NR_073461)	promoter-TSS (NR_073461)	-705	NR_073461	5409	Hs.1892	NM_002686	ENSG00000141744	PNMT	PENT|PNMTase	phenylethanolamine N-methyltransferase	protein-coding	36.48	5.34	6.831460674	1.37E-14
chr17-2310	chr17	39275367	39276367	+	16	1000	Intergenic	Intergenic	-1261	NM_033059	653240	Hs.307015	NM_033059	ENSG00000212721	KRTAP4-11	KAP4.11|KAP4.14|KRTAP4-14|KRTAP4.14	keratin associated protein 4-11	protein-coding	16	3.4	4.705882353	2.25E-05
chr17-2311	chr17	39498026	39499727	+	30.7	1701	Intergenic	MER11D|LTR|ERVK	8188	NM_004138	3883	Hs.512579	NM_004138	ENSG00000006059	KRT33A	HA3I|Ha-3I|K33A|KRTHA3A|Krt1-3|hHa3-I	keratin 33A	protein-coding	30.72	4.85	6.334020619	3.34E-12
chr17-2315	chr17	39715810	39716810	+	15.4	1000	Intergenic	LTR1C|LTR|ERV1	-5563	NR_038442	147093	Hs.680576	NR_038442	ENSG00000226629	LINC00974	-	long intergenic non-protein coding RNA 974	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr17-2316	chr17	39746183	39747183	+	14.1	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	-3536	NM_000526	3861	Hs.654380	NM_000526	ENSG00000186847	KRT14	CK14|EBS3|EBS4|K14|NFJ	keratin 14	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr17-2317	chr17	39810760	39816150	+	87.7	5390	Intergenic	Intergenic	-17004	NR_033415	284116	Hs.725790	NR_033415	ENSG00000214514	KRT42P	-	keratin 42 pseudogene	pseudo	87.69	11.16	7.857526882	6.82E-37
chr17-2327	chr17	41788097	41794304	+	100.5	6207	Intergenic	CpG	44956	NM_025237	50964	Hs.349204	NM_025237	ENSG00000167941	SOST	CDD|DAND6|SOST1|VBCH	sclerostin	protein-coding	100.49	24.75	4.06020202	1.02E-23
chr17-2332	chr17	41938541	41939541	+	15.4	1000	"intron (NM_145273, intron 6 of 6)"	"intron (NM_145273, intron 6 of 6)"	14525	NM_001168322	146894	Hs.147313	NM_145273	ENSG00000161649	CD300LG	CLM-9|CLM9|NEPMUCIN|TREM-4|TREM4	CD300 molecule like family member g	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr17-2333	chr17	41947260	41948823	+	21.1	1563	Intergenic	Intergenic	23525	NM_001168322	146894	Hs.147313	NM_145273	ENSG00000161649	CD300LG	CLM-9|CLM9|NEPMUCIN|TREM-4|TREM4	CD300 molecule like family member g	protein-coding	21.12	0	21.75608266	5.97E-21
chr17-2340	chr17	42338602	42340258	+	25.6	1656	"intron (NM_000342, intron 3 of 19)"	"intron (NM_000342, intron 3 of 19)"	6072	NM_000342	6521	Hs.210751	NM_000342	ENSG00000004939	SLC4A1	AE1|BND3|CD233|CHC|DI|EMPB3|EPB3|FR|RTA1A|SAO|SPH4|SW|WD|WD1|WR	solute carrier family 4 member 1 (Diego blood group)	protein-coding	25.6	2.91	8.797250859	6.53E-13
chr17-2343	chr17	42442831	42443831	+	16	1000	Intergenic	AluSx1|SINE|Alu	-2096	NM_198475	284069	Hs.154001	NM_198475	ENSG00000161682	FAM171A2	-	family with sequence similarity 171 member A2	protein-coding	16	1.46	10.95890411	3.44E-09
chr17-2344	chr17	42836703	42838476	+	31.4	1773	"intron (NM_001318933, intron 2 of 26)"	"intron (NM_001318933, intron 2 of 26)"	1042	NM_002390	4185	Hs.6088	NM_002390	ENSG00000073670	ADAM11	MDC	ADAM metallopeptidase domain 11	protein-coding	31.36	2.91	10.7766323	6.73E-17
chr17-2345	chr17	42853969	42854969	+	15.4	1000	"intron (NM_001318933, intron 20 of 26)"	"intron (NM_001318933, intron 20 of 26)"	17922	NM_002390	4185	Hs.6088	NM_002390	ENSG00000073670	ADAM11	MDC	ADAM metallopeptidase domain 11	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr17-2346	chr17	42861109	42865108	+	53.8	3999	Intergenic	Intergenic	26561	NM_002390	4185	Hs.6088	NM_002390	ENSG00000073670	ADAM11	MDC	ADAM metallopeptidase domain 11	protein-coding	53.77	12.62	4.260697306	2.65E-14
chr17-2350	chr17	45397490	45398490	+	15.4	1000	"intron (NR_110880, intron 1 of 2)"	L1MA7|LINE|L1	2989	NR_110881	102724508	Hs.661005	NR_110880	ENSG00000263293	THCAT158	-	thyroid cancer-associated transcript 158	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr17-2365	chr17	46685913	46686913	+	15.4	1000	"intron (NM_004502, intron 1 of 1)"	"intron (NM_004502, intron 1 of 1)"	1970	NM_004502	3217	Hs.436181	NM_004502	ENSG00000260027	HOXB7	HHO.C1|HOX2|HOX2C|Hox-2.3	homeobox B7	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr17-2374	chr17	46786151	46787151	+	16	1000	Intergenic	Intergenic	13231	NM_032391	84366	Hs.116467	NM_032391	ENSG00000159182	PRAC1	C17orf92|PRAC	prostate cancer susceptibility candidate 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr17-2377	chr17	46817846	46832844	+	234.9	14998	Intergenic	CpG	-19234	NM_006361	10481	Hs.66731	NM_006361	ENSG00000159184	HOXB13	PSGD	homeobox B13	protein-coding	234.91	57.28	4.101082402	4.84E-54
chr17-2382	chr17	46875304	46877161	+	29.4	1857	"intron (NM_001130918, intron 6 of 15)"	AluJb|SINE|Alu	-4546	NM_173623	284076	Hs.91930	NM_173623	ENSG00000170703	TTLL6	TTL.6	tubulin tyrosine ligase like 6	protein-coding	29.44	2.91	10.11683849	7.13E-16
chr17-2397	chr17	47608498	47609498	+	15.4	1000	"intron (NR_103773, intron 1 of 2)"	L1MC1|LINE|L1	20819	NR_106751	102465141		NR_106751	ENSG00000277478	MIR6165	hsa-mir-6165	microRNA 6165	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr17-2407	chr17	48068075	48072859	+	85.8	4784	"intron (NM_005220, intron 2 of 2)"	"intron (NM_005220, intron 2 of 2)"	2121	NM_005220	1747	Hs.134194	NM_005220	ENSG00000064195	DLX3	AI4|TDO	distal-less homeobox 3	protein-coding	85.77	16.5	5.198181818	2.09E-26
chr17-2411	chr17	48205220	48206765	+	22.4	1545	"intron (NM_174920, intron 1 of 10)"	"intron (NM_174920, intron 1 of 10)"	1254	NM_174920	201191	Hs.567769	NM_174920	ENSG00000167100	SAMD14	-	sterile alpha motif domain containing 14	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr17-2415	chr17	48663530	48664904	+	18.6	1374	"intron (NM_001256325, intron 9 of 35)"	"intron (NM_001256325, intron 9 of 35)"	-24748	NR_038439	253962	Hs.558704	NR_038439	ENSG00000250107	CACNA1G-AS1	-	CACNA1G antisense RNA 1	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr17-242	chr17	49425531	49427044	+	30.7	1513	Intergenic	MIR|SINE|MIR	12211	NR_122104	440446	Hs.626751	NR_122104	ENSG00000225860	LINC02072	-	long intergenic non-protein coding RNA 2072	ncRNA	30.72	6.8	4.517647059	2.53E-09
chr17-2420	chr17	49540555	49541555	+	16	1000	Intergenic	Intergenic	126979	NR_122104	440446	Hs.626751	NR_122104	ENSG00000225860	LINC02072	-	long intergenic non-protein coding RNA 2072	ncRNA	16	2.91	5.498281787	4.98E-06
chr17-2422	chr17	51867693	51868693	+	14.1	1000	Intergenic	Intergenic	-32046	NM_032559	84643	Hs.226805	NM_032559	ENSG00000141200	KIF2B	-	kinesin family member 2B	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr17-2424	chr17	54636379	54637379	+	16	1000	Intergenic	MER82|DNA|TcMar-Tigger	-34181	NM_005450	9241	Hs.248201	NM_005450	ENSG00000183691	NOG	SYM1|SYNS1|SYNS1A	noggin	protein-coding	16	1.94	8.24742268	7.67E-08
chr17-243	chr17	61614596	61618324	+	62.1	3728	"intron (NM_173092, intron 9 of 14)"	MIRc|SINE|MIR	-11336	NM_005828	10238	Hs.410596	NM_005828	ENSG00000136485	DCAF7	AN11|HAN11|SWAN-1|WDR68	DDB1 and CUL4 associated factor 7	protein-coding	62.09	9.22	6.734273319	1.02E-23
chr17-2433	chr17	55978298	55979298	+	14.7	1000	"intron (NM_001271875, intron 1 of 10)"	"intron (NM_001271875, intron 1 of 10)"	1952	NM_001292025	404093	Hs.46679	NM_001271875	ENSG00000180891	CUEDC1	-	CUE domain containing 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-2437	chr17	56339471	56340471	+	16	1000	"intron (NM_006151, intron 9 of 12)"	AluSx1|SINE|Alu	18325	NM_000250	4353	Hs.458272	NM_000250	ENSG00000005381	MPO	-	myeloperoxidase	protein-coding	16	2.91	5.498281787	4.98E-06
chr17-2439	chr17	57423359	57424359	+	14.7	1000	"intron (NM_001005404, intron 1 of 4)"	"intron (NM_001005404, intron 1 of 4)"	14806	NM_001005404	388403	Hs.463613	NM_001005404	ENSG00000175155	YPEL2	FKSG4	yippee like 2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr17-2447	chr17	59596018	59597018	+	15.4	1000	Intergenic	L2c|LINE|L2	62669	NM_018488	9496	Hs.143907	NM_018488	ENSG00000121075	TBX4	ICPPS|SPS	T-box 4	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr17-2455	chr17	62701264	62706706	+	94.1	5442	Intergenic	AluSx1|SINE|Alu	-45599	NM_022739	64750	Hs.515011	NM_022739	ENSG00000108854	SMURF2	-	SMAD specific E3 ubiquitin protein ligase 2	protein-coding	94.09	18.93	4.970417327	2.66E-27
chr17-2459	chr17	63391213	63392661	+	21.1	1448	Intergenic	MLT1A0|LTR|ERVL-MaLR	-61722	NR_131984	105827617		NR_131984	ENSG00000263520	CRAT40	-	cervical cancer-associated transcript 40	ncRNA	21.12	1.94	10.88659794	9.02E-12
chr17-2463	chr17	64217791	64218791	+	16	1000	"intron (NM_000042, intron 4 of 7)"	AluJr4|SINE|Alu	7265	NM_000042	350	Hs.445358	NM_000042	ENSG00000091583	APOH	B2G1|B2GP1|BG	apolipoprotein H	protein-coding	16	3.4	4.705882353	2.25E-05
chr17-2469	chr17	64737116	64738116	+	16	1000	"intron (NM_002737, intron 11 of 16)"	"intron (NM_002737, intron 11 of 16)"	-45574	NR_030364	693219		NR_030364	ENSG00000207943	MIR634	MIRN634|hsa-mir-634	microRNA 634	ncRNA	16	3.88	4.12371134	7.91E-05
chr17-2471	chr17	64941339	64942595	+	24.3	1256	Intergenic	Intergenic	-19013	NM_014405	27092	Hs.514423	NM_014405	ENSG00000075461	CACNG4	-	calcium voltage-gated channel auxiliary subunit gamma 4	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr17-2475	chr17	65003798	65005987	+	30.7	2189	"intron (NM_014405, intron 1 of 3)"	AluSz|SINE|Alu	-35760	NM_000727	786	Hs.147989	NM_000727	ENSG00000108878	CACNG1	CACNLG	calcium voltage-gated channel auxiliary subunit gamma 1	protein-coding	30.72	5.34	5.752808989	2.29E-11
chr17-2478	chr17	66155301	66156754	+	23.7	1453	Intergenic	Intergenic	-38774	NR_027283	440461	Hs.661522	NR_027283		LOC440461	-	Rho GTPase activating protein 27 pseudogene	pseudo	23.68	3.88	6.103092784	4.22E-09
chr17-248	chr17	72983772	72985638	+	37.1	1866	"intron (NM_014603, intron 1 of 4)"	"intron (NM_014603, intron 1 of 4)"	978	NM_014603	30850	Hs.78358	NM_014603	ENSG00000109089	CDR2L	HUMPPA	cerebellar degeneration related protein 2 like	protein-coding	37.12	5.82	6.378006873	1.70E-14
chr17-2480	chr17	68316391	68318118	+	26.9	1727	Intergenic	Intergenic	151578	NM_000891	3759	Hs.1547	NM_000891	ENSG00000123700	KCNJ2	ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3	potassium voltage-gated channel subfamily J member 2	protein-coding	26.88	4.85	5.542268041	7.61E-10
chr17-2482	chr17	68674176	68675176	+	15.4	1000	Intergenic	Intergenic	509000	NM_000891	3759	Hs.1547	NM_000891	ENSG00000123700	KCNJ2	ATFB9|HHBIRK1|HHIRK1|IRK1|KIR2.1|LQT7|SQT3	potassium voltage-gated channel subfamily J member 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr17-2483	chr17	70022976	70023976	+	14.7	1000	Intergenic	MER121|DNA|TcMar?	-1356	NR_110876	102723505	Hs.547482	NR_110876	ENSG00000228639	LINC02095	-	long intergenic non-protein coding RNA 2095	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr17-2484	chr17	70123703	70124703	+	16	1000	Intergenic	MER5A|DNA|hAT-Charlie	7042	NM_000346	6662	Hs.647409	NM_000346	ENSG00000125398	SOX9	CMD1|CMPD1|SRA1|SRXX2|SRXY10	SRY-box 9	protein-coding	16	3.4	4.705882353	2.25E-05
chr17-2486	chr17	70463098	70464699	+	25.6	1601	"intron (NR_137281, intron 1 of 4)"	"intron (NR_137281, intron 1 of 4)"	124946	NR_135222	146795	Hs.651743	NR_135222	ENSG00000264026	LINC02003	-	long intergenic non-protein coding RNA 2003	ncRNA	25.6	1.94	13.19587629	4.03E-16
chr17-2488	chr17	71160453	71162099	+	26.9	1646	"5' UTR (NM_001050, exon 1 of 2)"	"5' UTR (NM_001050, exon 1 of 2)"	116	NM_001050	6752	Hs.514451	NM_001050	ENSG00000180616	SSTR2	-	somatostatin receptor 2	protein-coding	26.88	2.91	9.237113402	7.03E-14
chr17-2489	chr17	71304098	71309518	+	83.2	5420	"intron (NM_012121, intron 1 of 1)"	"intron (NM_012121, intron 1 of 1)"	1335	NM_012121	23580	Hs.3903	NM_012121	ENSG00000179604	CDC42EP4	BORG4|CEP4|KAIA1777	CDC42 effector protein 4	protein-coding	83.21	10.19	8.165848871	1.77E-36
chr17-2490	chr17	71320716	71321983	+	23	1267	Intergenic	Intergenic	-13206	NM_012121	23580	Hs.3903	NM_012121	ENSG00000179604	CDC42EP4	BORG4|CEP4|KAIA1777	CDC42 effector protein 4	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr17-2491	chr17	71383250	71384250	+	16	1000	"intron (NM_001144952, intron 30 of 44)"	"intron (NM_001144952, intron 30 of 44)"	-75607	NM_012121	23580	Hs.3903	NM_012121	ENSG00000179604	CDC42EP4	BORG4|CEP4|KAIA1777	CDC42 effector protein 4	protein-coding	16	0.97	16.49484536	3.54E-11
chr17-2493	chr17	71421301	71422301	+	14.7	1000	"intron (NM_001144952, intron 12 of 44)"	AluSz|SINE|Alu	-88021	NR_135635	101928251	Hs.434726	NR_135635	ENSG00000264985	LOC101928251	-	uncharacterized LOC101928251	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr17-2494	chr17	71432845	71435342	+	33.3	2497	"intron (NM_001144952, intron 7 of 44)"	"intron (NM_001144952, intron 7 of 44)"	-75729	NR_135635	101928251	Hs.434726	NR_135635	ENSG00000264985	LOC101928251	-	uncharacterized LOC101928251	ncRNA	33.28	5.82	5.718213058	4.04E-12
chr17-2502	chr17	71739744	71740744	+	15.4	1000	"intron (NM_001278587, intron 2 of 5)"	"intron (NM_001278587, intron 2 of 5)"	6251	NM_001278587	100134391	Hs.694655	NM_001278587		LOC100134391	-	uncharacterized LOC100134391	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr17-2503	chr17	71781499	71782499	+	14.7	1000	promoter-TSS (NR_040020)	promoter-TSS (NR_040020)	-962	NR_040020	400620	Hs.348644	NR_040020	ENSG00000234721	LINC02092	-	long intergenic non-protein coding RNA 2092	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr17-2506	chr17	72131944	72132944	+	15.4	1000	Intergenic	Intergenic	-67351	NM_000999	6169	Hs.380953	NM_000999	ENSG00000172809	RPL38	L38	ribosomal protein L38	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr17-2510	chr17	72347742	72348742	+	16	1000	"exon (NM_153209, exon 13 of 20)"	"exon (NM_153209, exon 13 of 20)"	9716	NM_001080466	388419	Hs.211870	NM_001080466	ENSG00000204347	BTBD17	BTBD17A|LGALS3BPL|TANGO10A	BTB domain containing 17	protein-coding	16	1.94	8.24742268	7.67E-08
chr17-2511	chr17	72397032	72398890	+	30.7	1858	Intergenic	Intergenic	-29706	NM_022036	55890	Hs.446438	NM_018653	ENSG00000170412	GPRC5C	RAIG-3|RAIG3	G protein-coupled receptor class C group 5 member C	protein-coding	30.72	4.85	6.334020619	3.34E-12
chr17-2514	chr17	72637875	72638875	+	15.4	1000	Intergenic	LTR33|LTR|ERVL	-18478	NM_181449	342510	Hs.158954	NM_181449	ENSG00000186407	CD300E	CD300LE|CLM-2|CLM2|CMRF35-A5|IREM-2|IREM2|PIgR-2|PIgR2	CD300e molecule	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr17-2519	chr17	73592509	73593509	+	16	1000	"intron (NM_001309242, intron 13 of 63)"	"intron (NM_001309242, intron 13 of 63)"	8870	NM_001309242	80022	Hs.390817	NM_001080847	ENSG00000266714	MYO15B	MYO15BP	myosin XVB	protein-coding	16	2.91	5.498281787	4.98E-06
chr17-2520	chr17	74152818	74155338	+	40.3	2520	"intron (NM_001330501, intron 13 of 17)"	L2a|LINE|L2	-16698	NM_001454	2302	Hs.651204	NM_001454	ENSG00000129654	FOXJ1	FKHL13|HFH-4|HFH4	forkhead box J1	protein-coding	40.33	5.82	6.929553265	3.74E-16
chr17-2521	chr17	74224662	74225662	+	15.4	1000	"intron (NM_001330501, intron 1 of 17)"	"intron (NM_001330501, intron 1 of 17)"	11228	NM_052916	114804	Hs.500643	NM_052916	ENSG00000141576	RNF157	-	ring finger protein 157	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr17-2522	chr17	74468061	74470837	+	35.2	2776	"intron (NM_024599, intron 15 of 18)"	"intron (NM_024599, intron 15 of 18)"	5819	NR_110548	15	Hs.431417	NM_001088	ENSG00000129673	AANAT	DSPS|SNAT	aralkylamine N-acetyltransferase	protein-coding	35.2	7.77	4.53024453	3.74E-10
chr17-2524	chr17	74496134	74497423	+	18.6	1289	"intron (NM_024599, intron 1 of 18)"	"intron (NM_024599, intron 1 of 18)"	731	NM_024599	79651	Hs.464157	NM_024599	ENSG00000129667	RHBDF2	RHBDL5|RHBDL6|TEC|TOC|TOCG|iRhom2	rhomboid 5 homolog 2	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr17-2527	chr17	74820012	74821507	+	23.7	1495	Intergenic	AluY|SINE|Alu	25633	NR_110837	101928514	Hs.617206	NR_110837	ENSG00000267065	LINC02080	-	long intergenic non-protein coding RNA 2080	ncRNA	23.68	3.88	6.103092784	4.22E-09
chr17-2529	chr17	75045323	75046782	+	23	1459	Intergenic	MIRc|SINE|MIR	-38673	NM_001204408	6397	Hs.464184	NM_003003	ENSG00000129657	SEC14L1	PRELID4A|SEC14L	SEC14 like lipid binding 1	protein-coding	23.04	0.97	23.75257732	5.03E-19
chr17-253	chr17	1613128	1614128	+	22.4	1000	promoter-TSS (NM_001164407)	promoter-TSS (NM_001164407)	34	NM_001164407	727910	Hs.531005	NM_001164407	ENSG00000185561	TLCD2	-	TLC domain containing 2	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr17-2539	chr17	75885356	75886645	+	20.5	1289	Intergenic	AluSx1|SINE|Alu	-5831	NR_028337	400624	Hs.514521	NM_001001685	ENSG00000204283	LINC01973	-	long intergenic non-protein coding RNA 1973	ncRNA	20.48	2.43	8.427983539	2.25E-10
chr17-254	chr17	2646077	2647077	+	22.4	1000	Intergenic	AluSx3|SINE|Alu	4899	NR_031654	100302208		NR_031654	ENSG00000221200	MIR1253	MIRN1253|hsa-mir-1253	microRNA 1253	ncRNA	22.4	0.97	23.09278351	1.19E-17
chr17-2544	chr17	76930483	76931483	+	14.7	1000	Intergenic	Intergenic	-9511	NM_003255	7077	Hs.633514	NM_003255	ENSG00000035862	TIMP2	CSC-21K|DDC8	TIMP metallopeptidase inhibitor 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-2546	chr17	77107524	77108524	+	15.4	1000	"intron (NM_001082575, intron 5 of 14)"	"intron (NM_001082575, intron 5 of 14)"	37005	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr17-255	chr17	4641443	4648040	+	96	6597	"intron (NM_001136046, intron 2 of 13)"	MER102b|DNA|hAT-Charlie	1431	NM_001136046	84225	Hs.47223	NM_032265	ENSG00000141497	ZMYND15	SPGF14	zinc finger MYND-type containing 15	protein-coding	96.01	17.96	5.345768374	4.24E-30
chr17-2557	chr17	77258575	77261509	+	41	2934	"intron (NM_001082575, intron 3 of 14)"	MLT1C|LTR|ERVL-MaLR	189023	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	40.97	8.25	4.966060606	5.90E-13
chr17-2561	chr17	77318389	77319389	+	16	1000	"intron (NM_001082575, intron 2 of 14)"	"intron (NM_001082575, intron 2 of 14)"	193341	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-2562	chr17	77332480	77333480	+	14.1	1000	"intron (NM_001082575, intron 2 of 14)"	AluSx|SINE|Alu	179250	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr17-2563	chr17	77348526	77349526	+	14.1	1000	"intron (NM_001082575, intron 2 of 14)"	"intron (NM_001082575, intron 2 of 14)"	163204	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr17-2564	chr17	77355141	77356141	+	14.7	1000	"intron (NM_001082575, intron 2 of 14)"	"intron (NM_001082575, intron 2 of 14)"	156589	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr17-2566	chr17	77384700	77385700	+	15.4	1000	"intron (NM_001082575, intron 2 of 14)"	"intron (NM_001082575, intron 2 of 14)"	127030	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr17-2569	chr17	77412179	77414353	+	31.4	2174	"intron (NM_001082575, intron 2 of 14)"	"intron (NM_001082575, intron 2 of 14)"	98964	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	31.36	5.82	5.388316151	1.29E-10
chr17-2578	chr17	77699786	77700786	+	15.4	1000	Intergenic	AluJo|SINE|Alu	-4579	NM_178543	339221	Hs.114084	NM_178543	ENSG00000182156	ENPP7	ALK-SMase|E-NPP 7|NPP-7|NPP7	ectonucleotide pyrophosphatase/phosphodiesterase 7	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr17-2579	chr17	77716947	77718210	+	17.3	1263	Intergenic	Intergenic	12713	NM_178543	339221	Hs.114084	NM_178543	ENSG00000182156	ENPP7	ALK-SMase|E-NPP 7|NPP-7|NPP7	ectonucleotide pyrophosphatase/phosphodiesterase 7	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr17-2583	chr17	77813706	77819070	+	118.4	5364	Intergenic	CpG	-3175	NM_003655	8535	Hs.405046	NM_003655	ENSG00000141582	CBX4	NBP16|PC2	chromobox 4	protein-coding	118.41	16.5	7.176363636	3.30E-46
chr17-2587	chr17	77833179	77836582	+	49.3	3403	Intergenic	AluSx1|SINE|Alu	-21667	NM_003655	8535	Hs.405046	NM_003655	ENSG00000141582	CBX4	NBP16|PC2	chromobox 4	protein-coding	49.29	9.71	5.076210093	3.28E-15
chr17-2588	chr17	77871574	77872574	+	16	1000	Intergenic	AluSx1|SINE|Alu	-21082	NR_110851	101928738	Hs.399280	NR_110851	ENSG00000262188	LINC01978	-	long intergenic non-protein coding RNA 1978	ncRNA	16	2.91	5.498281787	4.98E-06
chr17-2593	chr17	78007161	78011612	+	69.8	4451	"intron (NM_019020, intron 1 of 11)"	CpG	271	NM_019020	125058	Hs.369819	NM_019020	ENSG00000167291	TBC1D16	-	TBC1 domain family member 16	protein-coding	69.77	14.56	4.791895604	6.57E-20
chr17-2596	chr17	78138553	78139553	+	15.4	1000	Intergenic	AluY|SINE|Alu	-4738	NR_047566	79092	Hs.675480	NM_024110	ENSG00000141527	CARD14	BIMP2|CARMA2|PRP|PSORS2|PSS1	caspase recruitment domain family member 14	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr17-2597	chr17	78157770	78158770	+	16	1000	"intron (NM_001257970, intron 4 of 14)"	"intron (NM_001257970, intron 4 of 14)"	-3329	NM_052819	79092	Hs.675480	NM_024110	ENSG00000141527	CARD14	BIMP2|CARMA2|PRP|PSORS2|PSS1	caspase recruitment domain family member 14	protein-coding	16	1.46	10.95890411	3.44E-09
chr17-2599	chr17	78383409	78385143	+	26.9	1734	"intron (NR_029376, intron 1 of 1)"	Harlequin-int|LTR|ERV1	-4691	NM_001164638	284131	Hs.389678	NM_173627	ENSG00000173818	ENDOV	-	endonuclease V	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr17-2601	chr17	78480187	78481187	+	15.4	1000	Intergenic	L1MB2|LINE|L1	-30283	NM_002522	4884	Hs.514556	NM_002522	ENSG00000171246	NPTX1	NP1	neuronal pentraxin 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr17-2608	chr17	79283561	79286129	+	38.4	2568	TTS (NM_178520)	TTS (NM_178520)	-1797	NR_038080	284185	Hs.631762	NM_178519		LINC00482	C17orf55	long intergenic non-protein coding RNA 482	ncRNA	38.4	5.82	6.597938144	2.56E-15
chr17-2615	chr17	146895	147895	+	14.7	1000	"intron (NM_006987, intron 5 of 9)"	MER21B|LTR|ERVL	-33601	NM_001242780	100506388	Hs.627744	NM_001242780	ENSG00000262061	LOC100506388	-	uncharacterized LOC100506388	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-2618	chr17	233583	235629	+	29.4	2046	Intergenic	CpG	-25512	NM_001013672	400566	Hs.499607	NM_001013672	ENSG00000187624	C17orf97	CK20|LIAT1	chromosome 17 open reading frame 97	protein-coding	29.44	1.94	15.17525773	1.31E-19
chr17-2620	chr17	764634	765935	+	21.1	1301	"intron (NM_022463, intron 1 of 7)"	AluSz|SINE|Alu	2067	NM_001205319	64359	Hs.527989	NM_022463	ENSG00000167693	NXN	NRX|TRG-4	nucleoredoxin	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr17-2623	chr17	810881	811881	+	15.4	1000	"intron (NM_022463, intron 1 of 7)"	"intron (NM_022463, intron 1 of 7)"	-1491	NR_135633	101927727	Hs.666198	NR_135633	ENSG00000262003	LOC101927727	-	uncharacterized LOC101927727	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr17-2624	chr17	824624	825624	+	14.7	1000	"intron (NM_022463, intron 1 of 7)"	L2|LINE|L2	12252	NR_135633	101927727	Hs.666198	NR_135633	ENSG00000262003	LOC101927727	-	uncharacterized LOC101927727	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr17-2627	chr17	1044840	1045840	+	15.4	1000	"intron (NM_001322841, intron 1 of 22)"	MER5B|DNA|hAT-Charlie	-15440	NM_001322840	29	Hs.159306	NM_001092	ENSG00000159842	ABR	MDB	active BCR-related	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr17-2632	chr17	1880767	1881767	+	14.1	1000	"intron (NM_178568, intron 1 of 1)"	"intron (NM_178568, intron 1 of 1)"	-39743	NR_135642	105371485	Hs.655867	NR_135642	ENSG00000228133	LOC105371485	-	uncharacterized LOC105371485	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr17-2634	chr17	3383219	3385231	+	30.7	2012	"intron (NM_001128085, intron 2 of 6)"	AluJb|SINE|Alu	4929	NM_000049	443	Hs.171142	NM_000049	ENSG00000108381	ASPA	ACY2|ASP	aspartoacylase	protein-coding	30.72	5.34	5.752808989	2.29E-11
chr17-2635	chr17	3388111	3389647	+	26.9	1536	"intron (NM_001128085, intron 4 of 6)"	"intron (NM_001128085, intron 4 of 6)"	9583	NM_000049	443	Hs.171142	NM_000049	ENSG00000108381	ASPA	ACY2|ASP	aspartoacylase	protein-coding	26.88	2.91	9.237113402	7.03E-14
chr17-2636	chr17	4477458	4478458	+	15.4	1000	Intergenic	MIR|SINE|MIR	-9318	NM_198501	342527	Hs.441709	NM_198501	ENSG00000188176	SMTNL2	-	smoothelin like 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr17-2643	chr17	4549822	4550822	+	14.7	1000	Intergenic	Intergenic	-5362	NM_001140	246	Hs.73809	NM_001140	ENSG00000161905	ALOX15	12-LOX|15-LOX-1|15LOX-1	arachidonate 15-lipoxygenase	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-2645	chr17	5066095	5067095	+	14.1	1000	"intron (NM_004505, intron 25 of 29)"	MSTB2|LTR|ERVL-MaLR	28583	NM_032530	84622	Hs.658402	NM_032530	ENSG00000180626	ZNF594	-	zinc finger protein 594	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr17-2646	chr17	5499227	5500227	+	14.7	1000	Intergenic	Intergenic	-11895	NM_033007	22861	Hs.652273	NM_014922	ENSG00000091592	NLRP1	CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|NAC|NALP1|PP1044|SLEV1|VAMAS1	NLR family pyrin domain containing 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-2647	chr17	5555845	5556845	+	14.7	1000	Intergenic	Intergenic	-68513	NM_033007	22861	Hs.652273	NM_014922	ENSG00000091592	NLRP1	CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|NAC|NALP1|PP1044|SLEV1|VAMAS1	NLR family pyrin domain containing 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-2648	chr17	5586597	5587597	+	12.8	1000	Intergenic	L1ME3A|LINE|L1	-88457	NR_040000	339166	Hs.736088	NR_040000	ENSG00000179314	LOC339166	-	uncharacterized LOC339166	ncRNA	12.8	1.94	6.597938144	4.51E-06
chr17-2649	chr17	5630674	5632026	+	17.3	1352	Intergenic	L1PB1|LINE|L1	-44204	NR_040000	339166	Hs.736088	NR_040000	ENSG00000179314	LOC339166	-	uncharacterized LOC339166	ncRNA	17.28	2.43	7.111111111	1.14E-07
chr17-2652	chr17	6064227	6070152	+	73.6	5925	Intergenic	MIRb|SINE|MIR	93255	NM_015253	23302	Hs.370166	NM_015253	ENSG00000179314	WSCD1	-	WSC domain containing 1	protein-coding	73.61	12.13	6.068425392	1.07E-25
chr17-2656	chr17	6161676	6162676	+	14.1	1000	Intergenic	AluSx3|SINE|Alu	176276	NM_001285402	23746	Hs.279887	NM_014336	ENSG00000129221	AIPL1	AIPL2|LCA4	aryl hydrocarbon receptor interacting protein like 1	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr17-2657	chr17	6311179	6312825	+	21.8	1646	Intergenic	Intergenic	26450	NM_001285402	23746	Hs.279887	NM_014336	ENSG00000129221	AIPL1	AIPL2|LCA4	aryl hydrocarbon receptor interacting protein like 1	protein-coding	21.76	2.43	8.95473251	2.49E-11
chr17-2664	chr17	7319652	7320652	+	15.4	1000	"intron (NM_020795, intron 6 of 6)"	(TCTG)n|Simple_repeat|Simple_repeat	-3527	NM_199339	374768	Hs.710599	NM_199339	ENSG00000181323	SPEM1	C17orf83	spermatid maturation 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr17-2671	chr17	7676678	7677678	+	14.1	1000	"intron (NM_020877, intron 28 of 85)"	AluSx1|SINE|Alu	19540	NR_002778	118432	Hs.658086	NR_002778	ENSG00000240480	RPL29P2	RPL29_10_1510	ribosomal protein L29 pseudogene 2	pseudo	14.08	1.94	7.257731959	6.14E-07
chr17-2672	chr17	7704511	7707758	+	38.4	3247	"intron (NM_020877, intron 58 of 85)"	AluSx|SINE|Alu	-37101	NM_001080424	23135	Hs.223678	NM_001080424	ENSG00000132510	KDM6B	JMJD3	lysine demethylase 6B	protein-coding	38.4	6.31	6.085578447	1.96E-14
chr17-2681	chr17	7987167	7988806	+	23	1639	"intron (NM_001139, intron 2 of 14)"	"intron (NM_001139, intron 2 of 14)"	3035	NM_001139	242	Hs.136574	NM_001139	ENSG00000179477	ALOX12B	12R-LOX|ARCI2	"arachidonate 12-lipoxygenase, 12R type"	protein-coding	23.04	3.4	6.776470588	5.45E-10
chr17-2682	chr17	8305304	8306304	+	14.7	1000	Intergenic	AluSx|SINE|Alu	-4660	NM_001146684	643904	Hs.526550	NM_001146684	ENSG00000189051	RNF222	-	ring finger protein 222	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr17-2685	chr17	8655424	8656424	+	14.7	1000	TTS (NM_001128076)	TTS (NM_001128076)	5953	NM_001128076	388333	Hs.368429	NM_001128076	ENSG00000183318	SPDYE4	-	speedy/RINGO cell cycle regulator family member E4	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr17-2686	chr17	8670460	8671460	+	14.1	1000	Intergenic	AluJb|SINE|Alu	-9083	NM_001128076	388333	Hs.368429	NM_001128076	ENSG00000183318	SPDYE4	-	speedy/RINGO cell cycle regulator family member E4	protein-coding	14.08	0.49	28.73469388	3.99E-13
chr17-2689	chr17	8931437	8932437	+	14.1	1000	"intron (NM_004822, intron 2 of 6)"	"intron (NM_004822, intron 2 of 6)"	7078	NM_004822	9423	Hs.660885	NM_004822	ENSG00000065320	NTN1	NTN1L	netrin 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr17-2690	chr17	8953677	8954677	+	15.4	1000	"intron (NM_004822, intron 2 of 6)"	MIRb|SINE|MIR	29318	NM_004822	9423	Hs.660885	NM_004822	ENSG00000065320	NTN1	NTN1L	netrin 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr17-2692	chr17	9029961	9030961	+	15.4	1000	"intron (NM_004822, intron 2 of 6)"	L2|LINE|L2	51974	NR_110828	101928266	Hs.639880	NR_110828	ENSG00000262966	LOC101928266	-	uncharacterized LOC101928266	ncRNA	15.36	0.49	31.34693878	1.26E-14
chr17-2695	chr17	9633104	9635366	+	29.4	2262	Intergenic	Intergenic	60379	NM_001105571	201140	Hs.61684	NM_001105571	ENSG00000184544	DHRS7C	SDR32C2	dehydrogenase/reductase 7C	protein-coding	29.44	5.34	5.513108614	1.33E-10
chr17-2701	chr17	10321341	10322341	+	15.4	1000	"intron (NM_002472, intron 5 of 39)"	"intron (NM_002472, intron 5 of 39)"	3426	NM_002472	4626	Hs.700484	NM_002472	ENSG00000133020	MYH8	DA7|MyHC-peri|MyHC-pn|gtMHC-F	myosin heavy chain 8	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr17-2705	chr17	10692848	10694774	+	30.1	1926	"intron (NR_073458, intron 1 of 3)"	"intron (NR_073458, intron 1 of 3)"	13605	NR_036581	100289255	Hs.306721	NR_036581	ENSG00000263429	LINC00675	-	long intergenic non-protein coding RNA 675	ncRNA	30.08	1.46	20.60273973	2.52E-22
chr17-2706	chr17	10740911	10742352	+	20.5	1441	promoter-TSS (NM_001101387)	promoter-TSS (NM_001101387)	-213	NM_001101387	644139	Hs.553909	NM_001101387	ENSG00000233670	PIRT	-	phosphoinositide interacting regulator of transient receptor potential channels	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr17-2708	chr17	11078487	11079742	+	19.8	1255	Intergenic	Intergenic	-65626	NM_207386	388336	Hs.592124	NM_175903	ENSG00000188803	SHISA6	-	shisa family member 6	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr17-2710	chr17	11426157	11427157	+	14.7	1000	"intron (NM_001173462, intron 3 of 4)"	"intron (NM_001173462, intron 3 of 4)"	-75091	NM_001372	1770	Hs.567259	NM_001372	ENSG00000007174	DNAH9	DNAH17L|DNEL1|DYH9|Dnahc9|HL-20|HL20	dynein axonemal heavy chain 9	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-2711	chr17	12107630	12108630	+	14.7	1000	Intergenic	AluSc|SINE|Alu	122914	NR_030613	100126313		NR_030613	ENSG00000266297	MIR744	MIRN744|hsa-mir-744|mir-744	microRNA 744	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr17-2712	chr17	12119591	12120591	+	14.1	1000	Intergenic	Intergenic	134875	NR_030613	100126313		NR_030613	ENSG00000266297	MIR744	MIRN744|hsa-mir-744|mir-744	microRNA 744	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr17-2713	chr17	12450714	12451714	+	12.8	1000	Intergenic	Intergenic	-2071	NR_034145	284034	Hs.376614	NR_034144	ENSG00000179136	LINC00670	-	long intergenic non-protein coding RNA 670	ncRNA	12.8	1.94	6.597938144	4.51E-06
chr17-2719	chr17	15211958	15212958	+	13.4	1000	"intron (NM_031898, intron 7 of 8)"	MER63A|DNA|hAT-Blackjack	32500	NM_031898	64518	Hs.414648	NM_031898	ENSG00000125409	TEKT3	-	tektin 3	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr17-2720	chr17	15846546	15849674	+	39.7	3128	promoter-TSS (NM_000676)	promoter-TSS (NM_000676)	-121	NM_000676	136	Hs.167046	NM_000676	ENSG00000170425	ADORA2B	ADORA2	adenosine A2b receptor	protein-coding	39.69	7.77	5.108108108	6.49E-13
chr17-2722	chr17	16480855	16481855	+	14.1	1000	Intergenic	ERV3-16A3_I-int|LTR|ERVL	-8829	NM_001346171	57336	Hs.99724	NM_020653	ENSG00000141040	ZNF287	ZKSCAN13|ZSCAN45	zinc finger protein 287	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr17-2723	chr17	16908525	16909525	+	15.4	1000	Intergenic	LTR16B1|LTR|ERVL	-33623	NM_012452	23495	Hs.158341	NM_012452	ENSG00000240505	TNFRSF13B	CD267|CVID|CVID2|IGAD2|RYZN|TACI|TNFRSF14B	TNF receptor superfamily member 13B	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr17-2725	chr17	18845588	18846588	+	15.4	1000	Intergenic	AluSc8|SINE|Alu	-7901	NM_001282417	125206	Hs.462418	NM_152351	ENSG00000154025	SLC5A10	SGLT-5|SGLT5	solute carrier family 5 member 10	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr17-2728	chr17	19193892	19194892	+	15.4	1000	"intron (NM_014964, intron 4 of 10)"	"intron (NM_014964, intron 4 of 10)"	15182	NR_048576	100874018	Hs.621672	NR_048576	ENSG00000235397	EPN2-AS1	-	EPN2 antisense RNA 1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr17-2732	chr17	19267071	19268343	+	18.6	1272	"intron (NM_001243475, intron 1 of 6)"	"intron (NM_001243475, intron 1 of 6)"	-1656	NM_001321218	27077	Hs.309467	NM_015681	ENSG00000108641	B9D1	B9|EPPB9|JBTS27|MKS9|MKSR1	B9 domain containing 1	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr17-2733	chr17	19312595	19313595	+	14.7	1000	Intergenic	Intergenic	-1396	NM_007148	7732	Hs.189482	NM_007148	ENSG00000128482	RNF112	BFP|ZNF179	ring finger protein 112	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr17-2738	chr17	19509686	19510686	+	13.4	1000	Intergenic	L1MB2|LINE|L1	-41878	NM_000382	224	Hs.499886	NM_000382	ENSG00000072210	ALDH3A2	ALDH10|FALDH|SLS	aldehyde dehydrogenase 3 family member A2	protein-coding	13.44	0	13.84477987	1.16E-11
chr17-2740	chr17	19643531	19645243	+	28.2	1712	"intron (NM_001330150, intron 5 of 9)"	"intron (NM_001330150, intron 5 of 9)"	4385	NM_001135168	218	Hs.531682	NM_000691	ENSG00000108602	ALDH3A1	ALDH3|ALDHIII	aldehyde dehydrogenase 3 family member A1	protein-coding	28.16	3.88	7.257731959	1.97E-12
chr17-2741	chr17	19891764	19892764	+	14.7	1000	Intergenic	Intergenic	-11095	NM_001330152	11216	Hs.642676	NM_007202	ENSG00000108599	AKAP10	AKAP-10|D-AKAP-2|D-AKAP2|PRKA10	A-kinase anchoring protein 10	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-2742	chr17	19903821	19904821	+	13.4	1000	Intergenic	AluSx|SINE|Alu	-8328	NM_001243439	92521	Hs.431045	NM_152904	ENSG00000128487	SPECC1	CYTSB|HCMOGT-1|HCMOGT1|NSP	sperm antigen with calponin homology and coiled-coil domains 1	protein-coding	13.44	1.46	9.205479452	3.57E-07
chr17-2743	chr17	19999808	20000808	+	14.7	1000	"intron (NM_001033553, intron 2 of 14)"	"intron (NM_001033553, intron 2 of 14)"	9973	NM_152904	92521	Hs.431045	NM_152904	ENSG00000128487	SPECC1	CYTSB|HCMOGT-1|HCMOGT1|NSP	sperm antigen with calponin homology and coiled-coil domains 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr17-2749	chr17	21401060	21402060	+	14.1	1000	Intergenic	Intergenic	53381	NM_001113434	339263	Hs.514016	NM_001113434	ENSG00000212719	C17orf51	-	chromosome 17 open reading frame 51	protein-coding	14.08	0.49	28.73469388	3.99E-13
chr17-2750	chr17	21881741	21882741	+	15.4	1000	Intergenic	AT_rich|Low_complexity|Low_complexity	-21821	NR_027084	284124	Hs.310247	NR_027084	ENSG00000276399	FLJ36000	-	uncharacterized FLJ36000	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr17-2752	chr17	25565930	25566930	+	14.7	1000	Intergenic	Intergenic	54592	NR_039748	100616277		NR_039748	ENSG00000263583	MIR4522	-	microRNA 4522	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr17-2753	chr17	25779780	25781152	+	18.6	1372	Intergenic	AluJr|SINE|Alu	-18570	NM_014238	8844	Hs.133534	NM_014238	ENSG00000141068	KSR1	KSR|RSU2	kinase suppressor of ras 1	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr17-2759	chr17	26099010	26100010	+	14.1	1000	"intron (NM_000625, intron 13 of 26)"	"intron (NM_000625, intron 13 of 26)"	28045	NM_000625	4843	Hs.709191	NM_000625	ENSG00000007171	NOS2	HEP-NOS|INOS|NOS|NOS2A	nitric oxide synthase 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr17-276	chr17	45922576	45931530	+	163.9	8954	"intron (NM_199262, intron 1 of 1)"	MIR3|SINE|MIR	1463	NM_001258248	80320	Hs.253603	NM_199262	ENSG00000189120	SP6	EPFN|EPIPROFIN|KLF14	Sp6 transcription factor	protein-coding	163.86	24.75	6.620606061	5.55E-60
chr17-2766	chr17	26322001	26323001	+	15.4	1000	Intergenic	Intergenic	-47187	NM_016231	51701	Hs.208759	NM_016231	ENSG00000087095	NLK	-	nemo like kinase	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr17-2770	chr17	26570720	26572292	+	25.6	1572	Intergenic	Intergenic	-2964	NR_002181	23614	Hs.744962	NR_002181	ENSG00000265060	PPY2P	PPY2	"pancreatic polypeptide 2, pseudogene"	pseudo	25.6	5.82	4.39862543	7.99E-08
chr17-2771	chr17	26603269	26604975	+	26.2	1706	"non-coding (NR_028334, exon 3 of 3)"	"non-coding (NR_028334, exon 3 of 3)"	29652	NR_002181	23614	Hs.744962	NR_002181	ENSG00000265060	PPY2P	PPY2	"pancreatic polypeptide 2, pseudogene"	pseudo	26.24	2.91	9.017182131	6.53E-13
chr17-2774	chr17	27519754	27520754	+	14.7	1000	Intergenic	Intergenic	-12847	NM_203318	399687	Hs.462590	NM_078471	ENSG00000196535	MYO18A	MAJN|MYSPDZ|SP-R210|SPR210	myosin XVIIIA	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-2777	chr17	28561491	28563862	+	45.4	2371	"5' UTR (NM_001045, exon 1 of 15)"	"5' UTR (NM_001045, exon 1 of 15)"	310	NM_001045	6532	Hs.29792	NM_001045	ENSG00000108576	SLC6A4	5-HTT|5-HTTLPR|5HTT|HTT|OCD1|SERT|SERT1|hSERT	solute carrier family 6 member 4	protein-coding	45.45	6.31	7.202852615	1.43E-18
chr17-2779	chr17	29739451	29740451	+	14.1	1000	"intron (NM_032932, intron 1 of 14)"	"intron (NM_032932, intron 1 of 14)"	21309	NM_032932	84440	Hs.406788	NM_032932	ENSG00000131242	RAB11FIP4	FIP4-Rab11|RAB11-FIP4	RAB11 family interacting protein 4	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr17-2781	chr17	29814663	29816291	+	25	1628	"intron (NM_001346748, intron 1 of 12)"	CpG	458	NM_001346747	84440	Hs.406788	NM_032932	ENSG00000131242	RAB11FIP4	FIP4-Rab11|RAB11-FIP4	RAB11 family interacting protein 4	protein-coding	24.96	4.37	5.711670481	4.38E-09
chr17-2784	chr17	30596846	30597846	+	13.4	1000	"intron (NM_138328, intron 2 of 8)"	"intron (NM_138328, intron 2 of 8)"	4151	NM_138328	162494	Hs.655027	NM_138328	ENSG00000141314	RHBDL3	RHBDL4|VRHO	rhomboid like 3	protein-coding	13.44	0	13.84477987	1.16E-11
chr17-2786	chr17	31020069	31021069	+	15.4	1000	"intron (NM_001303279, intron 16 of 21)"	"intron (NM_001303279, intron 16 of 21)"	183622	NM_001303279	4642	Hs.602063	NM_015194	ENSG00000176658	MYO1D	PPP1R108|myr4	myosin ID	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr17-2787	chr17	31235635	31236635	+	15.4	1000	Intergenic	L2b|LINE|L2	-18793	NM_001301746	26022	Hs.3447	NM_015544	ENSG00000006042	TMEM98	TADA1	transmembrane protein 98	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr17-2790	chr17	31408176	31409176	+	14.1	1000	"intron (NM_183377, intron 3 of 9)"	"intron (NM_183377, intron 3 of 9)"	88807	NM_001317225	124912	Hs.434112	NM_173847	ENSG00000141316	SPACA3	ALLP17|CT54|LYC3|LYZC|LYZL3|SLLP1	sperm acrosome associated 3	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr17-2792	chr17	31590158	31591158	+	14.1	1000	"intron (NM_001094, intron 1 of 9)"	"intron (NM_001094, intron 1 of 9)"	29348	NM_183377	40	Hs.368417	NM_001094	ENSG00000108684	ASIC2	ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1	acid sensing ion channel subunit 2	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr17-2793	chr17	31604241	31605241	+	14.1	1000	"intron (NM_001094, intron 1 of 9)"	"intron (NM_001094, intron 1 of 9)"	15265	NM_183377	40	Hs.368417	NM_001094	ENSG00000108684	ASIC2	ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1	acid sensing ion channel subunit 2	protein-coding	14.08	0.49	28.73469388	3.99E-13
chr17-2796	chr17	31898766	31899766	+	12.8	1000	"intron (NM_001094, intron 1 of 9)"	"intron (NM_001094, intron 1 of 9)"	-38487	NR_037584	100506677	Hs.652571	NR_037584	ENSG00000265544	AA06	AA02|AA04|AA05	uncharacterized LOC100506677	pseudo	12.8	1.94	6.597938144	4.51E-06
chr17-2797	chr17	32035335	32036335	+	14.1	1000	"intron (NM_001094, intron 1 of 9)"	"intron (NM_001094, intron 1 of 9)"	-175056	NR_037584	100506677	Hs.652571	NR_037584	ENSG00000265544	AA06	AA02|AA04|AA05	uncharacterized LOC100506677	pseudo	14.08	2.91	4.838487973	2.67E-05
chr17-2798	chr17	32351775	32352775	+	14.1	1000	"intron (NM_001094, intron 1 of 9)"	"intron (NM_001094, intron 1 of 9)"	131550	NM_001094	40	Hs.368417	NM_001094	ENSG00000108684	ASIC2	ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1	acid sensing ion channel subunit 2	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr17-2800	chr17	32438663	32439663	+	15.4	1000	"intron (NM_001094, intron 1 of 9)"	MIRb|SINE|MIR	44662	NM_001094	40	Hs.368417	NM_001094	ENSG00000108684	ASIC2	ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1	acid sensing ion channel subunit 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr17-2802	chr17	32615369	32616369	+	14.7	1000	TTS (NM_002986)	TTS (NM_002986)	3182	NM_002986	6356	Hs.54460	NM_002986	ENSG00000172156	CCL11	SCYA11	C-C motif chemokine ligand 11	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-2807	chr17	32842242	32843242	+	14.7	1000	Intergenic	Intergenic	63646	NM_207454	400591	Hs.514090	NM_207454		C17orf102	-	chromosome 17 open reading frame 102	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr17-2811	chr17	32891490	32893220	+	22.4	1730	Intergenic	Intergenic	14033	NM_207454	400591	Hs.514090	NM_207454		C17orf102	-	chromosome 17 open reading frame 102	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr17-2814	chr17	32946707	32947707	+	15.4	1000	"intron (NM_001304438, intron 1 of 8)"	"intron (NM_001304438, intron 1 of 8)"	39439	NM_001304438	124842	Hs.310482	NM_207313	ENSG00000181291	TMEM132E	DFNB99	transmembrane protein 132E	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr17-2818	chr17	33090130	33091130	+	14.7	1000	Intergenic	L2b|LINE|L2	182862	NM_001304438	124842	Hs.310482	NM_207313	ENSG00000181291	TMEM132E	DFNB99	transmembrane protein 132E	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr17-2820	chr17	33190108	33191683	+	24.3	1575	Intergenic	MIRc|SINE|MIR	97633	NM_006584	10693	Hs.73072	NM_006584	ENSG00000132141	CCT6B	CCT-zeta-2|CCTZ-2|Cctz2|TCP-1-zeta-2|TSA303	chaperonin containing TCP1 subunit 6B	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr17-2824	chr17	33473976	33475431	+	23	1455	promoter-TSS (NM_001033576)	promoter-TSS (NM_001033576)	-133	NM_001033576	146862	Hs.379636	NM_173167	ENSG00000141161	UNC45B	CMYA4|CTRCT43|SMUNC45|UNC-45B|UNC45	unc-45 myosin chaperone B	protein-coding	23.04	5.34	4.314606742	4.49E-07
chr17-2826	chr17	33484841	33485841	+	15.4	1000	"intron (NM_173167, intron 6 of 18)"	"intron (NM_173167, intron 6 of 18)"	10058	NM_173167	146862	Hs.379636	NM_173167	ENSG00000141161	UNC45B	CMYA4|CTRCT43|SMUNC45|UNC-45B|UNC45	unc-45 myosin chaperone B	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr17-2831	chr17	34318462	34319462	+	14.1	1000	"intron (NR_027922, intron 4 of 6)"	AluSx|SINE|Alu	-5198	NM_032962	6358	Hs.272493	NM_004166	ENSG00000276409	CCL14	CC-1|CC-3|CKB1|HCC-1|HCC-1(1-74)|HCC-1/HCC-3|HCC-3|MCIF|NCC-2|NCC2|SCYA14|SCYL2|SY14	C-C motif chemokine ligand 14	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr17-2838	chr17	35095789	35097061	+	16	1272	Intergenic	Intergenic	138400	NM_024864	79922	Hs.194864	NM_024864	ENSG00000278619	MRM1	-	mitochondrial rRNA methyltransferase 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-2840	chr17	35138840	35139840	+	15.4	1000	Intergenic	MIRb|SINE|MIR	154620	NR_135669	102723471	Hs.567930	NR_135668	ENSG00000277268	LOC102723471	-	uncharacterized LOC102723471	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr17-2845	chr17	36009115	36010115	+	14.7	1000	Intergenic	AluJb|SINE|Alu	-6122	NM_007010	11056	Hs.590937	NM_007010	ENSG00000278053	DDX52	HUSSY19|ROK1	DExD-box helicase 52	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr17-2847	chr17	36089764	36090764	+	14.1	1000	"intron (NM_001304286, intron 4 of 6)"	"intron (NM_001304286, intron 4 of 6)"	14805	NM_001304286	6928	Hs.191144	NM_000458	ENSG00000275410	HNF1B	FJHN|HNF-1-beta|HNF-1B|HNF1beta|HNF2|HPC11|LF-B3|LFB3|MODY5|TCF-2|TCF2|VHNF1	HNF1 homeobox B	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr17-2849	chr17	36094203	36096967	+	41	2764	"intron (NM_000458, intron 2 of 8)"	"intron (NM_000458, intron 2 of 8)"	9484	NM_001304286	6928	Hs.191144	NM_000458	ENSG00000275410	HNF1B	FJHN|HNF-1-beta|HNF-1B|HNF1beta|HNF2|HPC11|LF-B3|LFB3|MODY5|TCF-2|TCF2|VHNF1	HNF1 homeobox B	protein-coding	40.97	4.85	8.44742268	3.22E-19
chr17-2857	chr17	36701524	36702524	+	14.1	1000	"intron (NM_025248, intron 17 of 18)"	"intron (NM_025248, intron 17 of 18)"	60159	NM_025248	80725	Hs.448872	NM_025248	ENSG00000277363	SRCIN1	P140|SNIP	SRC kinase signaling inhibitor 1	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr17-2858	chr17	36718486	36725605	+	100.5	7119	"intron (NM_025248, intron 3 of 18)"	"intron (NM_025248, intron 3 of 18)"	40138	NM_025248	80725	Hs.448872	NM_025248	ENSG00000277363	SRCIN1	P140|SNIP	SRC kinase signaling inhibitor 1	protein-coding	100.49	23.78	4.225820017	9.47E-25
chr17-2862	chr17	37264556	37266112	+	23.7	1556	"intron (NM_020405, intron 3 of 13)"	"intron (NM_020405, intron 3 of 13)"	42568	NM_020405	57125	Hs.125036	NM_020405	ENSG00000161381	PLXDC1	TEM3|TEM7	plexin domain containing 1	protein-coding	23.68	0.49	48.32653061	2.80E-24
chr17-2866	chr17	38514998	38515998	+	15.4	1000	Intergenic	AluY|SINE|Alu	5447	NM_152219	125111	Hs.444663	NM_152219	ENSG00000183153	GJD3	CX31.9|Cx30.2|GJA11|GJC1	gap junction protein delta 3	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr17-2868	chr17	38837634	38838634	+	14.7	1000	Intergenic	Intergenic	-16718	NM_152349	125113	Hs.6920	NM_152349	ENSG00000213424	KRT222	KA21|KRT222P	keratin 222	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr17-2876	chr17	38943345	38944345	+	14.1	1000	Intergenic	Intergenic	-5059	NM_181537	342574	Hs.59363	NM_181537	ENSG00000171446	KRT27	K25IRS3|KRT25C	keratin 27	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr17-2878	chr17	39016184	39017184	+	13.4	1000	TTS (NM_000223)	TTS (NM_000223)	6778	NM_000223	3859	Hs.66739	NM_000223	ENSG00000187242	KRT12	K12	keratin 12	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr17-2879	chr17	39023668	39024668	+	15.4	1000	promoter-TSS (NM_000223)	promoter-TSS (NM_000223)	-706	NM_000223	3859	Hs.66739	NM_000223	ENSG00000187242	KRT12	K12	keratin 12	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr17-2882	chr17	39158520	39160101	+	22.4	1581	Intergenic	L2c|LINE|L2	-3172	NM_031959	83897	Hs.307026	NM_031959	ENSG00000212900	KRTAP3-2	KAP3.2|KRTAP3.2	keratin associated protein 3-2	protein-coding	22.4	5.34	4.194756554	1.97E-06
chr17-2884	chr17	39331090	39332090	+	14.7	1000	Intergenic	ERV3-16A3_I-int|LTR|ERVL	2870	NM_033062	85291	Hs.380165	NM_033062	ENSG00000244537	KRTAP4-2	KAP4.2|KRTAP4.2	keratin associated protein 4-2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr17-2890	chr17	39614113	39615113	+	15.4	1000	Intergenic	Intergenic	9025	NM_002278	3882	Hs.41752	NM_002278	ENSG00000108759	KRT32	HA2|HKA2|KRTHA2|hHa2	keratin 32	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr17-2891	chr17	39638647	39639647	+	14.7	1000	Intergenic	AluY|SINE|Alu	-1755	NM_002280	3886	Hs.73082	NM_002280	ENSG00000197079	KRT35	HA5|Ha-5|KRTHA5|hHa5	keratin 35	protein-coding	14.72	0	15.16333034	3.99E-13
chr17-2894	chr17	39728419	39729419	+	15.4	1000	promoter-TSS (NM_000226)	promoter-TSS (NM_000226)	-609	NM_000226	3857	Hs.654569	NM_000226	ENSG00000171403	KRT9	CK-9|EPPK|K9	keratin 9	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr17-2897	chr17	41635581	41637002	+	25	1421	Intergenic	MER58B|DNA|hAT-Charlie	-12491	NM_001079675	2118	Hs.434059	NM_001986	ENSG00000175832	ETV4	E1A-F|E1AF|PEA3|PEAS3	ETS variant 4	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr17-2899	chr17	41727059	41728059	+	14.7	1000	"intron (NM_001040002, intron 2 of 3)"	MIR3|SINE|MIR	11372	NM_013999	4222	Hs.438	NM_004527	ENSG00000005102	MEOX1	KFS2|MOX1	mesenchyme homeobox 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr17-290	chr17	72580271	72584023	+	51.2	3752	"intron (NM_152460, intron 1 of 2)"	HERVK3-int|LTR|ERVK	1090	NM_152460	146723	Hs.350775	NM_152460		C17orf77	-	chromosome 17 open reading frame 77	protein-coding	51.21	12.62	4.057844691	4.76E-13
chr17-2900	chr17	41757508	41762282	+	69.8	4774	Intergenic	MER45A|DNA|hAT-Tip100	-20633	NM_001040002	4222	Hs.438	NM_004527	ENSG00000005102	MEOX1	KFS2|MOX1	mesenchyme homeobox 1	protein-coding	69.77	11.16	6.251792115	5.17E-25
chr17-2903	chr17	41781090	41782090	+	14.7	1000	Intergenic	LTR78|LTR|ERV1	-42328	NM_001040002	4222	Hs.438	NM_004527	ENSG00000005102	MEOX1	KFS2|MOX1	mesenchyme homeobox 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-2905	chr17	41818447	41824285	+	73	5838	Intergenic	Intergenic	14790	NM_025237	50964	Hs.349204	NM_025237	ENSG00000167941	SOST	CDD|DAND6|SOST1|VBCH	sclerostin	protein-coding	72.97	17.96	4.062917595	6.30E-18
chr17-2909	chr17	41904804	41911598	+	110.7	6794	"intron (NM_001330233, intron 5 of 19)"	"intron (NM_001330233, intron 5 of 19)"	2346	NM_001932	4356	Hs.396566	NM_001932	ENSG00000161647	MPP3	DLG3	membrane palmitoylated protein 3	protein-coding	110.73	16.5	6.710909091	3.73E-41
chr17-2912	chr17	41950853	41951853	+	14.1	1000	Intergenic	HERVK3-int|LTR|ERVK	26648	NM_001278376	4355	Hs.514208	NM_005374	ENSG00000108852	MPP2	DLG2	membrane palmitoylated protein 2	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr17-2914	chr17	41981595	41986538	+	89.6	4943	"intron (NM_001278381, intron 1 of 13)"	"intron (NM_001278381, intron 1 of 13)"	1244	NM_001278381	4355	Hs.514208	NM_005374	ENSG00000108852	MPP2	DLG2	membrane palmitoylated protein 2	protein-coding	89.61	14.56	6.154532967	9.40E-32
chr17-2915	chr17	42003793	42005128	+	19.2	1335	Intergenic	Intergenic	9884	NR_026770	23591	Hs.721804	NR_026770	ENSG00000267496	FAM215A	APR-2|C17orf88|LINC00530	family with sequence similarity 215 member A (non-protein coding)	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr17-2916	chr17	42299152	42300152	+	15.4	1000	promoter-TSS (NR_045058)	promoter-TSS (NR_045058)	-658	NR_045058	7343	Hs.89781	NM_014233	ENSG00000108312	UBTF	NOR-90|UBF|UBF-1|UBF1|UBF2	"upstream binding transcription factor, RNA polymerase I"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr17-2919	chr17	42841198	42842198	+	14.7	1000	"intron (NM_001318933, intron 2 of 26)"	"intron (NM_001318933, intron 2 of 26)"	5151	NM_002390	4185	Hs.6088	NM_002390	ENSG00000073670	ADAM11	MDC	ADAM metallopeptidase domain 11	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr17-292	chr17	74911972	74916002	+	64.6	4030	"intron (NM_198955, intron 7 of 15)"	"intron (NM_198955, intron 7 of 15)"	45258	NM_198955	146664	Hs.144531	NM_144677	ENSG00000167889	MGAT5B	GnT-IX|GnT-VB	"mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B"	protein-coding	64.65	15.53	4.162910496	3.66E-16
chr17-2922	chr17	43077942	43078942	+	14.1	1000	Intergenic	Intergenic	-32798	NM_006688	10882	Hs.134012	NM_006688	ENSG00000131094	C1QL1	C1QRF|C1QTNF14|CRF	complement C1q like 1	protein-coding	14.08	0	14.5040551	3.99E-13
chr17-293	chr17	77093921	77096085	+	43.5	2164	"intron (NM_001082575, intron 9 of 14)"	"intron (NM_001082575, intron 9 of 14)"	23984	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	43.53	3.88	11.21907216	4.33E-24
chr17-2930	chr17	46106992	46111730	+	66.6	4738	"intron (NM_016429, intron 8 of 10)"	"intron (NM_016429, intron 8 of 10)"	5252	NR_029687	406943		NR_029687	ENSG00000207947	MIR152	MIRN152|mir-152	microRNA 152	ncRNA	66.57	12.62	5.27496038	3.79E-21
chr17-2938	chr17	46664793	46669326	+	68.5	4533	promoter-TSS (NR_033202)	promoter-TSS (NR_033202)	-723	NR_033201	404266	Hs.660088	NR_033201	ENSG00000233101	HOXB-AS3	-	HOXB cluster antisense RNA 3	ncRNA	68.49	8.25	8.301818182	3.28E-30
chr17-2947	chr17	46720342	46725864	+	96	5522	Intergenic	Intergenic	-13182	NR_029582	406972		NR_029582	ENSG00000210741	MIR196A1	MIRN196-1|MIRN196A1|mir-196a-1	microRNA 196a-1	ncRNA	96.01	16.99	5.65097116	1.39E-31
chr17-2949	chr17	46743400	46744400	+	14.1	1000	Intergenic	Intergenic	-33979	NR_029582	406972		NR_029582	ENSG00000210741	MIR196A1	MIRN196-1|MIRN196A1|mir-196a-1	microRNA 196a-1	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr17-2951	chr17	46795269	46800644	+	85.1	5375	Intergenic	Intergenic	1926	NM_032391	84366	Hs.116467	NM_032391	ENSG00000159182	PRAC1	C17orf92|PRAC	prostate cancer susceptibility candidate 1	protein-coding	85.13	16.99	5.010594467	5.09E-25
chr17-2952	chr17	46802395	46806568	+	67.2	4173	"intron (NM_006361, intron 1 of 1)"	"intron (NM_006361, intron 1 of 1)"	1630	NM_006361	10481	Hs.66731	NM_006361	ENSG00000159184	HOXB13	PSGD	homeobox B13	protein-coding	67.21	11.16	6.022401434	1.96E-23
chr17-2969	chr17	47603165	47604893	+	27.5	1728	"intron (NR_103773, intron 1 of 2)"	"intron (NR_103773, intron 1 of 2)"	15850	NR_106751	102465141		NR_106751	ENSG00000277478	MIR6165	hsa-mir-6165	microRNA 6165	ncRNA	27.52	0	28.34883498	1.92E-29
chr17-2975	chr17	47967269	47972250	+	74.9	4981	Intergenic	L2a|LINE|L2	-44380	NM_001077504	255061	Hs.652130	NM_170685	ENSG00000176358	TAC4	EK|HK-1|HK1|PPT-C	tachykinin 4 (hemokinin)	protein-coding	74.89	17.47	4.286777333	4.48E-19
chr17-2980	chr17	48017075	48018075	+	13.4	1000	Intergenic	Intergenic	-28987	NM_138281	1748	Hs.591167	NM_001934	ENSG00000108813	DLX4	BP1|DLX7|DLX8|DLX9|OFC15	distal-less homeobox 4	protein-coding	13.44	1.46	9.205479452	3.57E-07
chr17-2985	chr17	48396215	48397215	+	14.7	1000	Intergenic	MER41A|LTR|ERV1	-26678	NR_110010	64132	Hs.463416	NM_022167	ENSG00000015532	XYLT2	PXYLT2|SOS|XT-II|XT2|xylT-II	xylosyltransferase 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-2987	chr17	48618220	48619220	+	14.7	1000	"intron (NM_017957, intron 8 of 9)"	"intron (NM_017957, intron 8 of 9)"	-2605	NR_135675	105371824	Hs.683630	NR_135675	ENSG00000250286	LOC105371824	-	uncharacterized LOC105371824	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr17-2988	chr17	48633238	48634238	+	14.7	1000	TTS (NM_001258372)	TTS (NM_001258372)	-4691	NM_001256326	8913	Hs.591169	NM_018896	ENSG00000006283	CACNA1G	Ca(V)T.1|Cav3.1|NBR13|SCA42	calcium voltage-gated channel subunit alpha1 G	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-2990	chr17	48678321	48679582	+	18.6	1261	"intron (NM_001256325, intron 19 of 35)"	"intron (NM_001256325, intron 19 of 35)"	-33267	NM_001144070	8714	Hs.463421	NM_003786	ENSG00000108846	ABCC3	ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2	ATP binding cassette subfamily C member 3	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr17-2993	chr17	48702634	48704313	+	25.6	1679	"exon (NM_018896, exon 38 of 38)"	"exon (NM_018896, exon 38 of 38)"	-8745	NM_001144070	8714	Hs.463421	NM_003786	ENSG00000108846	ABCC3	ABC31|EST90757|MLP2|MOAT-D|MRP3|cMOAT2	ATP binding cassette subfamily C member 3	protein-coding	25.6	4.85	5.278350515	4.26E-09
chr17-3004	chr17	49724796	49725796	+	14.7	1000	"intron (NM_001082533, intron 7 of 9)"	"intron (NM_001082533, intron 7 of 9)"	311220	NR_122104	440446	Hs.626751	NR_122104	ENSG00000225860	LINC02072	-	long intergenic non-protein coding RNA 2072	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr17-3005	chr17	49859976	49860976	+	15.4	1000	"intron (NM_001082533, intron 4 of 9)"	"intron (NM_001082533, intron 4 of 9)"	375656	NM_020178	56934	Hs.463466	NM_020178	ENSG00000154975	CA10	CA-RPX|CARPX|HUCEP-15	carbonic anhydrase 10	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr17-3007	chr17	53549055	53550055	+	14.7	1000	Intergenic	HERVH-int|LTR|ERV1	-50214	NM_012329	23531	Hs.463483	NM_012329	ENSG00000108960	MMD	MMA|MMD1|PAQR11	monocyte to macrophage differentiation associated	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr17-301	chr17	79138640	79142904	+	67.8	4264	promoter-TSS (NM_001080395)	promoter-TSS (NM_001080395)	-900	NM_001080395	9625	Hs.514575	NM_004920	ENSG00000181409	AATK	AATYK|AATYK1|LMR1|LMTK1|PPP1R77|p35BP	apoptosis associated tyrosine kinase	protein-coding	67.85	6.8	9.977941176	3.39E-34
chr17-3012	chr17	55215030	55216030	+	14.1	1000	Intergenic	Intergenic	52395	NM_001242902	8165	Hs.463506	NM_003488	ENSG00000121057	AKAP1	AKAP|AKAP121|AKAP149|AKAP84|D-AKAP1|PPP1R43|PRKA1|SAKAP84|TDRD17	A-kinase anchoring protein 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr17-3019	chr17	56222450	56223450	+	14.7	1000	Intergenic	L1MB7|LINE|L1	-9565	NM_012374	26689	Hs.531188	NM_012374	ENSG00000141194	OR4D1	OR17-23|OR4D3|OR4D4P|TPCR16	olfactory receptor family 4 subfamily D member 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr17-3025	chr17	57408839	57410702	+	30.7	1863	"intron (NM_001005404, intron 1 of 4)"	CpG	717	NM_001005404	388403	Hs.463613	NM_001005404	ENSG00000175155	YPEL2	FKSG4	yippee like 2	protein-coding	30.72	5.82	5.278350515	1.29E-10
chr17-3026	chr17	57463119	57464119	+	14.7	1000	"intron (NM_001005404, intron 2 of 4)"	AluJo|SINE|Alu	20175	NR_039882	100616204		NR_039882	ENSG00000263857	MIR4729	-	microRNA 4729	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr17-3028	chr17	59567409	59568409	+	14.1	1000	Intergenic	Intergenic	34060	NM_018488	9496	Hs.143907	NM_018488	ENSG00000121075	TBX4	ICPPS|SPS	T-box 4	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr17-3030	chr17	60189770	60190770	+	14.1	1000	Intergenic	MIRb|SINE|MIR	-47627	NM_005121	9969	Hs.282678	NM_005121	ENSG00000108510	MED13	ARC250|DRIP250|HSPC221|THRAP1|TRAP240	mediator complex subunit 13	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr17-3031	chr17	60811624	60812624	+	14.7	1000	"intron (NM_001288780, intron 7 of 10)"	"intron (NM_001288780, intron 7 of 10)"	71890	NM_001100875	162333	Hs.665663	NM_152598	ENSG00000173838	10-Mar	MARCH-X|RNF190	membrane associated ring-CH-type finger 10	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-3032	chr17	61040530	61041530	+	14.7	1000	Intergenic	Charlie22a|DNA|hAT-Charlie	19454	NR_030363	693218		NR_030363	ENSG00000207552	MIR633	MIRN633|hsa-mir-633	microRNA 633	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr17-3034	chr17	61566200	61567200	+	14.1	1000	"intron (NM_152830, intron 6 of 13)"	"intron (NM_152830, intron 6 of 13)"	4522	NM_152830	1636	Hs.298469	NM_000789	ENSG00000159640	ACE	ACE1|CD143|DCP|DCP1	angiotensin I converting enzyme	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr17-3035	chr17	61965257	61966257	+	14.7	1000	Intergenic	Intergenic	-6455	NM_022558	2689	Hs.406754	NM_002059	ENSG00000136487	GH2	GH-V|GHB2|GHL|GHV|hGH-V	growth hormone 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr17-3043	chr17	63426474	63427474	+	14.1	1000	Intergenic	Intergenic	-26685	NR_131984	105827617		NR_131984	ENSG00000263520	CRAT40	-	cervical cancer-associated transcript 40	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr17-3046	chr17	64295496	64296496	+	14.7	1000	Intergenic	Intergenic	-2930	NM_002737	5578	Hs.531704	NM_002737	ENSG00000154229	PRKCA	AAG6|PKC-alpha|PKCA|PRKACA	protein kinase C alpha	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr17-3048	chr17	64335254	64336254	+	16	1000	"intron (NM_002737, intron 2 of 16)"	"intron (NM_002737, intron 2 of 16)"	36828	NM_002737	5578	Hs.531704	NM_002737	ENSG00000154229	PRKCA	AAG6|PKC-alpha|PKCA|PRKACA	protein kinase C alpha	protein-coding	16	3.88	4.12371134	7.91E-05
chr17-3050	chr17	64588189	64589189	+	14.1	1000	"intron (NM_002737, intron 3 of 16)"	"intron (NM_002737, intron 3 of 16)"	-175717	NR_110822	101928001	Hs.650730	NR_110822		PRKCA-AS1	-	PRKCA antisense RNA 1	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr17-3051	chr17	64630587	64633654	+	33.3	3067	"intron (NM_002737, intron 3 of 16)"	"intron (NM_002737, intron 3 of 16)"	-151070	NR_030364	693219		NR_030364	ENSG00000207943	MIR634	MIRN634|hsa-mir-634	microRNA 634	ncRNA	33.28	3.88	8.577319588	4.55E-16
chr17-3057	chr17	64984756	64986066	+	20.5	1310	"intron (NM_014405, intron 1 of 3)"	MLT1C|LTR|ERVL-MaLR	24431	NM_014405	27092	Hs.514423	NM_014405	ENSG00000075461	CACNG4	-	calcium voltage-gated channel auxiliary subunit gamma 4	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr17-3059	chr17	65049305	65050305	+	15.4	1000	"intron (NM_000727, intron 1 of 3)"	"intron (NM_000727, intron 1 of 3)"	9153	NM_000727	786	Hs.147989	NM_000727	ENSG00000108878	CACNG1	CACNLG	calcium voltage-gated channel auxiliary subunit gamma 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr17-3061	chr17	66078230	66079556	+	21.1	1326	Intergenic	Intergenic	-18803	NR_027418	100499466	Hs.591212	NR_027418		LINC00674	-	long intergenic non-protein coding RNA 674	ncRNA	21.12	4.37	4.832951945	6.64E-07
chr17-3063	chr17	66086671	66087671	+	15.4	1000	Intergenic	Intergenic	-10525	NR_027418	100499466	Hs.591212	NR_027418		LINC00674	-	long intergenic non-protein coding RNA 674	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr17-3068	chr17	66476595	66477595	+	14.7	1000	"intron (NM_001278433, intron 1 of 10)"	L1MEd|LINE|L1	-23430	NM_001320772	55062	Hs.463964	NM_017983	ENSG00000070540	WIPI1	ATG18|ATG18A|WIPI49	"WD repeat domain, phosphoinositide interacting 1"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr17-3070	chr17	66555058	66556058	+	14.7	1000	promoter-TSS (NR_027751)	promoter-TSS (NR_027751)	-990	NR_027751	54757	Hs.268874	NM_017565	ENSG00000108950	FAM20A	AI1G|AIGFS|FP2747	"FAM20A, golgi associated secretory pathway pseudokinase"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-3074	chr17	66680275	66681275	+	14.7	1000	Intergenic	AluSx|SINE|Alu	56480	NR_110825	101928104	Hs.569826	NR_110825	ENSG00000267659	LINC01482	-	long intergenic non-protein coding RNA 1482	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr17-3075	chr17	66697020	66698020	+	14.7	1000	Intergenic	MLT1E1A|LTR|ERVL-MaLR	73225	NR_110825	101928104	Hs.569826	NR_110825	ENSG00000267659	LINC01482	-	long intergenic non-protein coding RNA 1482	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr17-3077	chr17	67126375	67127375	+	14.1	1000	"intron (NM_080284, intron 6 of 38)"	"intron (NM_080284, intron 6 of 38)"	11140	NM_080284	23460	Hs.709514	NM_080284	ENSG00000154262	ABCA6	EST155051	ATP binding cassette subfamily A member 6	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr17-3083	chr17	68781388	68782730	+	21.1	1342	Intergenic	Intergenic	416261	NR_104152	101928165	Hs.407613	NR_104152	ENSG00000260785	CASC17	LINC00600	cancer susceptibility candidate 17 (non-protein coding)	ncRNA	21.12	0	21.75608266	5.97E-21
chr17-3086	chr17	70451516	70452516	+	14.7	1000	"intron (NR_137281, intron 1 of 4)"	"intron (NR_137281, intron 1 of 4)"	113064	NR_135222	146795	Hs.651743	NR_135222	ENSG00000264026	LINC02003	-	long intergenic non-protein coding RNA 2003	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr17-3087	chr17	70570616	70571616	+	14.7	1000	"intron (NR_137281, intron 1 of 4)"	"intron (NR_137281, intron 1 of 4)"	17827	NR_036488	100499467	Hs.157726	NR_036488		LINC00673	HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1	long intergenic non-protein coding RNA 673	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr17-3088	chr17	70590746	70591746	+	14.1	1000	Intergenic	L1MC3|LINE|L1	-2301	NR_137280	100499467	Hs.157726	NR_036488		LINC00673	HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1	long intergenic non-protein coding RNA 673	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr17-3093	chr17	71331186	71332186	+	14.1	1000	"3' UTR (NM_001144952, exon 45 of 45)"	"3' UTR (NM_001144952, exon 45 of 45)"	-23543	NM_012121	23580	Hs.3903	NM_012121	ENSG00000179604	CDC42EP4	BORG4|CEP4|KAIA1777	CDC42 effector protein 4	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr17-3094	chr17	71338117	71339117	+	14.7	1000	"intron (NM_001144952, intron 44 of 44)"	"intron (NM_001144952, intron 44 of 44)"	-30474	NM_012121	23580	Hs.3903	NM_012121	ENSG00000179604	CDC42EP4	BORG4|CEP4|KAIA1777	CDC42 effector protein 4	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr17-3095	chr17	71367561	71369240	+	24.3	1679	"intron (NM_001144952, intron 36 of 44)"	"intron (NM_001144952, intron 36 of 44)"	-60257	NM_012121	23580	Hs.3903	NM_012121	ENSG00000179604	CDC42EP4	BORG4|CEP4|KAIA1777	CDC42 effector protein 4	protein-coding	24.32	2.91	8.357388316	5.77E-12
chr17-3099	chr17	71478520	71479520	+	15.4	1000	"intron (NM_001144952, intron 2 of 44)"	"intron (NM_001144952, intron 2 of 44)"	-30802	NR_135635	101928251	Hs.434726	NR_135635	ENSG00000264985	LOC101928251	-	uncharacterized LOC101928251	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr17-31	chr17	63555580	63556838	+	34.6	1258	"intron (NM_004655, intron 1 of 10)"	CpG	1531	NM_004655	8313	Hs.156527	NM_004655	ENSG00000168646	AXIN2	AXIL|ODCRCS	axin 2	protein-coding	34.56	0	35.60086253	2.67E-40
chr17-310	chr17	5614553	5617329	+	47.4	2776	Intergenic	MSTB|LTR|ERVL-MaLR	-59613	NR_040000	339166	Hs.736088	NR_040000	ENSG00000179314	LOC339166	-	uncharacterized LOC339166	ncRNA	47.37	7.28	6.506868132	2.47E-18
chr17-3100	chr17	71489413	71490413	+	14.1	1000	"intron (NM_001144952, intron 2 of 44)"	"intron (NM_001144952, intron 2 of 44)"	-19909	NR_135635	101928251	Hs.434726	NR_135635	ENSG00000264985	LOC101928251	-	uncharacterized LOC101928251	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr17-3101	chr17	71516179	71517447	+	17.9	1268	"intron (NM_001144952, intron 1 of 44)"	"intron (NM_001144952, intron 1 of 44)"	6991	NR_135635	101928251	Hs.434726	NR_135635	ENSG00000264985	LOC101928251	-	uncharacterized LOC101928251	ncRNA	17.92	0.97	18.4742268	1.12E-13
chr17-3107	chr17	71598947	71599947	+	14.1	1000	"intron (NM_001144952, intron 1 of 44)"	"intron (NM_001144952, intron 1 of 44)"	40780	NM_001144952	54549	Hs.435719	NM_019064	ENSG00000069188	SDK2	-	sidekick cell adhesion molecule 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr17-3109	chr17	71638688	71639688	+	14.1	1000	"intron (NM_001144952, intron 1 of 44)"	CpG	1039	NM_001144952	54549	Hs.435719	NM_019064	ENSG00000069188	SDK2	-	sidekick cell adhesion molecule 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr17-311	chr17	6589774	6591036	+	21.8	1262	"intron (NM_001143838, intron 10 of 10)"	"intron (NM_001143838, intron 10 of 10)"	26335	NM_001284509	284111	Hs.399496	NM_177550	ENSG00000141485	SLC13A5	EIEE25|NACT|mIndy	solute carrier family 13 member 5	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr17-3110	chr17	71733823	71736124	+	32	2301	"intron (NM_001278587, intron 1 of 5)"	MIRc|SINE|MIR	980	NM_001278587	100134391	Hs.694655	NM_001278587		LOC100134391	-	uncharacterized LOC100134391	protein-coding	32	4.85	6.597938144	5.03E-13
chr17-3112	chr17	71746482	71748792	+	30.7	2310	"intron (NM_001278587, intron 4 of 5)"	"intron (NM_001278587, intron 4 of 5)"	13644	NM_001278587	100134391	Hs.694655	NM_001278587		LOC100134391	-	uncharacterized LOC100134391	protein-coding	30.72	4.85	6.334020619	3.34E-12
chr17-3115	chr17	72006992	72007992	+	14.7	1000	Intergenic	Intergenic	-182816	NR_027146	283982	Hs.464079	NM_182564		LINC00469	C17orf54	long intergenic non-protein coding RNA 469	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr17-3121	chr17	72173338	72174907	+	21.8	1569	Intergenic	Intergenic	-25673	NM_000999	6169	Hs.380953	NM_000999	ENSG00000172809	RPL38	L38	ribosomal protein L38	protein-coding	21.76	3.4	6.4	3.73E-09
chr17-3122	chr17	72314085	72315356	+	18.6	1271	Intergenic	Intergenic	-7631	NM_153209	124602	Hs.372773	NM_153209	ENSG00000196169	KIF19	KIF19A	kinesin family member 19	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr17-3123	chr17	72317666	72318666	+	14.7	1000	Intergenic	L2c|LINE|L2	-4185	NM_153209	124602	Hs.372773	NM_153209	ENSG00000196169	KIF19	KIF19A	kinesin family member 19	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr17-3124	chr17	72321257	72322257	+	14.1	1000	promoter-TSS (NM_153209)	promoter-TSS (NM_153209)	-594	NM_153209	124602	Hs.372773	NM_153209	ENSG00000196169	KIF19	KIF19A	kinesin family member 19	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr17-3128	chr17	72425609	72426609	+	15.4	1000	Intergenic	Intergenic	-1558	NM_022036	55890	Hs.446438	NM_018653	ENSG00000170412	GPRC5C	RAIG-3|RAIG3	G protein-coupled receptor class C group 5 member C	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr17-3135	chr17	72667042	72668042	+	14.7	1000	"5' UTR (NM_175738, exon 1 of 9)"	"5' UTR (NM_175738, exon 1 of 9)"	286	NM_175738	326624	Hs.351413	NM_175738	ENSG00000172794	RAB37	-	"RAB37, member RAS oncogene family"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr17-3144	chr17	73582856	73585088	+	37.8	2232	promoter-TSS (NM_001309242)	promoter-TSS (NM_001309242)	-167	NM_001309242	80022	Hs.390817	NM_001080847	ENSG00000266714	MYO15B	MYO15BP	myosin XVB	protein-coding	37.76	5.82	6.487972509	1.70E-14
chr17-3159	chr17	75596085	75597085	+	15.4	1000	Intergenic	Intergenic	53562	NR_040050	100507351	Hs.514518	NR_040050		LOC100507351	-	uncharacterized LOC100507351	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr17-3160	chr17	75654935	75655935	+	14.1	1000	Intergenic	AluSx1|SINE|Alu	69206	NR_104134	100132174	Hs.640110	NR_104134	ENSG00000267790	LINC01987	-	long intergenic non-protein coding RNA 1987	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr17-3161	chr17	75680051	75681051	+	14.7	1000	Intergenic	L1M5|LINE|L1	44090	NR_104134	100132174	Hs.640110	NR_104134	ENSG00000267790	LINC01987	-	long intergenic non-protein coding RNA 1987	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr17-3171	chr17	76455517	76456517	+	15.4	1000	"exon (NM_173628, exon 60 of 81)"	"exon (NM_173628, exon 60 of 81)"	-24975	NR_102401	100996295	Hs.615304	NR_102401		DNAH17-AS1	-	DNAH17 antisense RNA 1	ncRNA	15.36	0.49	31.34693878	1.26E-14
chr17-3174	chr17	77097999	77098999	+	14.1	1000	"intron (NM_001082575, intron 8 of 14)"	"intron (NM_001082575, intron 8 of 14)"	27480	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr17-3176	chr17	77164705	77167815	+	38.4	3110	"intron (NM_001082575, intron 4 of 14)"	"intron (NM_001082575, intron 4 of 14)"	95241	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	38.4	4.85	7.917525773	2.24E-17
chr17-3179	chr17	77196612	77198217	+	30.1	1605	"intron (NM_001082575, intron 4 of 14)"	"intron (NM_001082575, intron 4 of 14)"	126395	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	30.08	2.91	10.33676976	7.13E-16
chr17-3182	chr17	77229487	77235773	+	78.7	6286	"intron (NM_001082575, intron 3 of 14)"	"intron (NM_001082575, intron 3 of 14)"	161611	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	78.73	15.53	5.06954282	1.74E-23
chr17-3187	chr17	77296321	77297321	+	14.7	1000	"intron (NM_001082575, intron 3 of 14)"	"intron (NM_001082575, intron 3 of 14)"	215409	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr17-3189	chr17	77321111	77322111	+	15.4	1000	"intron (NM_001082575, intron 2 of 14)"	"intron (NM_001082575, intron 2 of 14)"	190619	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr17-3190	chr17	77326213	77327812	+	21.8	1599	"intron (NM_001082575, intron 2 of 14)"	"intron (NM_001082575, intron 2 of 14)"	185218	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	21.76	3.4	6.4	3.73E-09
chr17-3193	chr17	77341680	77342680	+	14.1	1000	"intron (NM_001082575, intron 2 of 14)"	AluSx|SINE|Alu	170050	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr17-3198	chr17	77387748	77389125	+	21.1	1377	"intron (NM_001082575, intron 2 of 14)"	MIR|SINE|MIR	123794	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr17-3199	chr17	77394398	77396004	+	21.8	1606	"intron (NM_001082575, intron 2 of 14)"	MLT1C|LTR|ERVL-MaLR	117029	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr17-3208	chr17	77695724	77696724	+	14.1	1000	Intergenic	Intergenic	-8641	NM_178543	339221	Hs.114084	NM_178543	ENSG00000182156	ENPP7	ALK-SMase|E-NPP 7|NPP-7|NPP7	ectonucleotide pyrophosphatase/phosphodiesterase 7	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr17-3219	chr17	77868415	77869415	+	14.1	1000	Intergenic	Intergenic	-24241	NR_110851	101928738	Hs.399280	NR_110851	ENSG00000262188	LINC01978	-	long intergenic non-protein coding RNA 1978	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr17-322	chr17	37306763	37308076	+	23.7	1313	"intron (NM_020405, intron 1 of 13)"	"intron (NM_020405, intron 1 of 13)"	483	NM_020405	57125	Hs.125036	NM_020405	ENSG00000161381	PLXDC1	TEM3|TEM7	plexin domain containing 1	protein-coding	23.68	4.37	5.418764302	2.46E-08
chr17-3221	chr17	77904331	77905331	+	14.1	1000	Intergenic	Intergenic	-4307	NR_110850	101928766	Hs.630666	NR_110850	ENSG00000262585	LINC01979	-	long intergenic non-protein coding RNA 1979	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr17-3224	chr17	78042112	78043720	+	20.5	1608	"3' UTR (NM_001330508, exon 11 of 11)"	"3' UTR (NM_001330508, exon 11 of 11)"	-32409	NR_134848	2548	Hs.1437	NM_000152	ENSG00000171298	GAA	LYAG	"glucosidase alpha, acid"	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr17-3229	chr17	78219264	78220565	+	23.7	1301	"intron (NM_001166348, intron 10 of 16)"	"intron (NM_001166348, intron 10 of 16)"	-14746	NM_001256071	57674	Hs.195642	NM_020914	ENSG00000173821	RNF213	ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57	ring finger protein 213	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr17-3230	chr17	78439238	78440238	+	14.7	1000	TTS (NM_002522)	TTS (NM_002522)	10666	NM_002522	4884	Hs.514556	NM_002522	ENSG00000171246	NPTX1	NP1	neuronal pentraxin 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr17-3232	chr17	78452308	78454753	+	39.7	2445	Intergenic	AluSz|SINE|Alu	-3126	NM_002522	4884	Hs.514556	NM_002522	ENSG00000171246	NPTX1	NP1	neuronal pentraxin 1	protein-coding	39.69	3.88	10.22938144	5.62E-21
chr17-3237	chr17	79031918	79041907	+	129.9	9989	"intron (NM_017451, intron 3 of 14)"	"intron (NM_017451, intron 3 of 14)"	27965	NM_006340	10458	Hs.128316	NM_006340	ENSG00000175866	BAIAP2	BAP2|FLAF3|IRSP53	BAI1 associated protein 2	protein-coding	129.94	24.75	5.25010101	4.41E-39
chr17-3238	chr17	79104597	79105597	+	14.1	1000	"intron (NM_001080395, intron 2 of 13)"	"intron (NM_001080395, intron 2 of 13)"	651	NM_004920	9625	Hs.514575	NM_004920	ENSG00000181409	AATK	AATYK|AATYK1|LMR1|LMTK1|PPP1R77|p35BP	apoptosis associated tyrosine kinase	protein-coding	14.08	0	14.5040551	3.99E-13
chr17-3239	chr17	79125291	79127182	+	31.4	1891	"intron (NM_001080395, intron 1 of 13)"	AluJb|SINE|Alu	-13071	NR_027255	388428	Hs.591202	NM_207389	ENSG00000225180	AATK-AS1	-	AATK antisense RNA 1	ncRNA	31.36	3.88	8.082474227	3.25E-14
chr17-3248	chr17	79917863	79920929	+	50.6	3066	promoter-TSS (NM_178493)	promoter-TSS (NM_178493)	-339	NM_178493	147111	Hs.106137	NM_178493	ENSG00000185269	NOTUM	hNOTUM	"NOTUM, palmitoleoyl-protein carboxylesterase"	protein-coding	50.57	3.88	13.03350515	1.59E-29
chr17-327	chr17	38894607	38898273	+	55.7	3666	Intergenic	Intergenic	15144	NM_181534	147183	Hs.55412	NM_181534	ENSG00000204897	KRT25	ARWH3|KRT24IRS1|KRT25A	keratin 25	protein-coding	55.69	13.59	4.097866078	6.99E-14
chr17-333	chr17	43036021	43038730	+	51.8	2709	"3' UTR (NM_006688, exon 2 of 2)"	"3' UTR (NM_006688, exon 2 of 2)"	8269	NM_006688	10882	Hs.134012	NM_006688	ENSG00000131094	C1QL1	C1QRF|C1QTNF14|CRF	complement C1q like 1	protein-coding	51.85	2.91	17.81786942	2.53E-35
chr17-336	chr17	45055943	45057487	+	26.9	1544	promoter-TSS (NM_203400)	promoter-TSS (NM_203400)	-101	NM_203400	388394	Hs.367999	NM_203400	ENSG00000179673	RPRML	-	reprimo like	protein-coding	26.88	4.37	6.151029748	1.19E-10
chr17-346	chr17	48286036	48287290	+	23.7	1254	Intergenic	MIR3|SINE|MIR	-5392	NR_110806	101927230	Hs.514326	NR_110806	ENSG00000251085	LINC01969	-	long intergenic non-protein coding RNA 1969	ncRNA	23.68	2.91	8.137457045	4.85E-11
chr17-357	chr17	71917170	71918430	+	24.3	1260	Intergenic	L1MEe|LINE|L1	-93124	NR_027146	283982	Hs.464079	NM_182564		LINC00469	C17orf54	long intergenic non-protein coding RNA 469	ncRNA	24.32	5.34	4.554307116	9.72E-08
chr17-358	chr17	72644449	72647917	+	53.1	3468	Intergenic	Intergenic	-21073	NM_175738	326624	Hs.351413	NM_175738	ENSG00000172794	RAB37	-	"RAB37, member RAS oncogene family"	protein-coding	53.13	12.62	4.209984152	1.13E-13
chr17-359	chr17	72691621	72693143	+	28.2	1522	"intron (NM_001289082, intron 4 of 6)"	"intron (NM_001289082, intron 4 of 6)"	16757	NM_001289083	146722	Hs.567706	NM_139018	ENSG00000186074	CD300LF	CD300f|CLM-1|CLM1|IREM-1|IREM1|IgSF13|LMIR3|NKIR	CD300 molecule like family member f	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr17-360	chr17	74214560	74215818	+	24.3	1258	"intron (NM_001330501, intron 1 of 17)"	"intron (NM_001330501, intron 1 of 17)"	21201	NM_052916	114804	Hs.500643	NM_052916	ENSG00000141576	RNF157	-	ring finger protein 157	protein-coding	24.32	2.43	10.00823045	2.59E-13
chr17-362	chr17	75791641	75792641	+	21.1	1000	Intergenic	Intergenic	-67500	NR_104134	100132174	Hs.640110	NR_104134	ENSG00000267790	LINC01987	-	long intergenic non-protein coding RNA 1987	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr17-374	chr17	6633072	6634072	+	20.5	1000	Intergenic	L1M1|LINE|L1	-16832	NM_177550	284111	Hs.399496	NM_177550	ENSG00000141485	SLC13A5	EIEE25|NACT|mIndy	solute carrier family 13 member 5	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr17-376	chr17	10895983	10897239	+	20.5	1256	Intergenic	Intergenic	-155193	NM_001101387	644139	Hs.553909	NM_001101387	ENSG00000233670	PIRT	-	phosphoinositide interacting regulator of transient receptor potential channels	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr17-380	chr17	21305509	21307981	+	39.7	2472	"intron (NM_021012, intron 1 of 2)"	L1M5|LINE|L1	-1703	NM_001194958	100134444	Hs.200629	NM_001194958	ENSG00000260458	KCNJ18	KIR2.6|TTPP2	potassium voltage-gated channel subfamily J member 18	protein-coding	39.69	9.71	4.08753862	1.52E-10
chr17-381	chr17	25845645	25848762	+	56.3	3117	"intron (NM_014238, intron 2 of 20)"	MIRb|SINE|MIR	48167	NM_014238	8844	Hs.133534	NM_014238	ENSG00000141068	KSR1	KSR|RSU2	kinase suppressor of ras 1	protein-coding	56.33	9.22	6.109544469	1.80E-20
chr17-382	chr17	30641628	30642878	+	23.7	1250	"intron (NM_001330181, intron 6 of 7)"	"intron (NM_001330181, intron 6 of 7)"	26975	NM_022344	64149	Hs.655257	NM_022344	ENSG00000108666	C17orf75	NJMU-R1|SRI2	chromosome 17 open reading frame 75	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr17-384	chr17	36298610	36299610	+	21.1	1000	Intergenic	AluJr|SINE|Alu	15091	NM_001291466	102723859	Hs.454716	NM_001291466	ENSG00000278599	TBC1D3E	TBC1DE3	TBC1 domain family member 3E	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr17-39	chr17	46693469	46706342	+	260.5	12873	"3' UTR (NM_024017, exon 2 of 2)"	"3' UTR (NM_024017, exon 2 of 2)"	3930	NM_024017	3219	Hs.463350	NM_024017	ENSG00000170689	HOXB9	HOX-2.5|HOX2|HOX2E	homeobox B9	protein-coding	260.51	36.89	7.061805367	1.11E-98
chr17-402	chr17	46671944	46677716	+	114.6	5772	"intron (NM_018952, intron 3 of 3)"	"intron (NM_018952, intron 3 of 3)"	1510	NR_110330	404266	Hs.660088	NR_033201	ENSG00000233101	HOXB-AS3	-	HOXB cluster antisense RNA 3	ncRNA	114.57	19.9	5.757286432	1.46E-37
chr17-406	chr17	46707852	46709102	+	23.7	1250	Intergenic	Intergenic	1444	NR_029582	406972		NR_029582	ENSG00000210741	MIR196A1	MIRN196-1|MIRN196A1|mir-196a-1	microRNA 196a-1	ncRNA	23.68	1.94	12.20618557	6.71E-14
chr17-409	chr17	46862540	46865331	+	46.7	2791	"intron (NM_001130918, intron 11 of 15)"	"intron (NM_001130918, intron 11 of 15)"	7751	NM_173623	284076	Hs.91930	NM_173623	ENSG00000170703	TTLL6	TTL.6	tubulin tyrosine ligase like 6	protein-coding	46.73	3.88	12.04381443	3.15E-26
chr17-415	chr17	48264576	48272415	+	134.4	7839	"intron (NM_000088, intron 32 of 50)"	"intron (NM_000088, intron 32 of 50)"	10505	NM_000088	1277	Hs.172928	NM_000088	ENSG00000108821	COL1A1	EDSC|OI1|OI2|OI3|OI4	collagen type I alpha 1 chain	protein-coding	134.42	15.53	8.655505473	3.68E-60
chr17-419	chr17	48874600	48875906	+	28.8	1306	Intergenic	L1PA5|LINE|L1	29242	NR_107026	102466918		NR_107026	ENSG00000278672	MIR8059	hsa-mir-8059	microRNA 8059	ncRNA	28.8	3.88	7.422680412	1.97E-12
chr17-425	chr17	56607604	56610881	+	78.7	3277	"intron (NM_001198713, intron 1 of 11)"	CpG	203	NR_104197	5414	Hs.287518	NM_004574	ENSG00000108387	4-Sep	ARTS|BRADEION|CE5B3|H5|MART|PNUTL2|SEP4|hCDCREL-2|hucep-7	septin 4	protein-coding	78.73	7.77	10.13256113	2.91E-39
chr17-433	chr17	74134679	74135933	+	25.6	1254	"intron (NM_001454, intron 2 of 2)"	"intron (NM_001454, intron 2 of 2)"	-1331	NR_040017	100507218	Hs.654866	NR_040017	ENSG00000267128	RNF157-AS1	-	RNF157 antisense RNA 1	ncRNA	25.6	3.88	6.597938144	1.00E-10
chr17-434	chr17	74579927	74585614	+	130.6	5687	promoter-TSS (NM_006456)	promoter-TSS (NM_006456)	-625	NM_006456	10610	Hs.592105	NM_006456	ENSG00000070731	ST6GALNAC2	SAITL1|SIAT7|SIAT7B|SIATL1|ST6GalNAII|STHM	"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2"	protein-coding	130.58	14.56	8.968406593	6.82E-60
chr17-439	chr17	77431828	77435875	+	62.1	4047	"intron (NM_001082575, intron 2 of 14)"	"intron (NM_001082575, intron 2 of 14)"	78379	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	62.09	10.68	5.813670412	3.83E-21
chr17-44	chr17	72196461	72198697	+	51.8	2236	Intergenic	Intergenic	-2216	NM_000999	6169	Hs.380953	NM_000999	ENSG00000172809	RPL38	L38	ribosomal protein L38	protein-coding	51.85	7.28	7.122252747	7.57E-21
chr17-440	chr17	77461399	77462399	+	21.1	1000	"intron (NM_001082575, intron 2 of 14)"	"intron (NM_001082575, intron 2 of 14)"	50331	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	21.12	0.97	21.77319588	2.68E-16
chr17-441	chr17	77643506	77645607	+	37.1	2101	Intergenic	Intergenic	36502	NR_039893	100616170		NR_039893	ENSG00000266665	MIR4739	mir-4739	microRNA 4739	ncRNA	37.12	6.31	5.882725832	1.20E-13
chr17-444	chr17	78161363	78162627	+	25.6	1264	"intron (NM_052819, intron 1 of 9)"	"intron (NM_052819, intron 1 of 9)"	396	NM_052819	79092	Hs.675480	NM_024110	ENSG00000141527	CARD14	BIMP2|CARMA2|PRP|PSORS2|PSS1	caspase recruitment domain family member 14	protein-coding	25.6	2.91	8.797250859	6.53E-13
chr17-445	chr17	78387115	78388458	+	23	1343	"intron (NR_029376, intron 1 of 1)"	LTR46|LTR|ERV1	-1181	NM_001164638	284131	Hs.389678	NM_173627	ENSG00000173818	ENDOV	-	endonuclease V	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr17-457	chr17	10239894	10245412	+	78.1	5518	"intron (NM_003802, intron 18 of 40)"	"intron (NM_003802, intron 18 of 40)"	33669	NM_003802	8735	Hs.711142	NM_003802	ENSG00000006788	MYH13	MyHC-IIL|MyHC-eo	myosin heavy chain 13	protein-coding	78.09	18.44	4.234815618	6.70E-20
chr17-462	chr17	19474366	19475366	+	21.1	1000	"exon (NM_018242, exon 15 of 17)"	"exon (NM_018242, exon 15 of 17)"	13993	NR_003025	677885	Hs.658450	NR_003025	ENSG00000239149	SNORA59A	ACA59	"small nucleolar RNA, H/ACA box 59A"	snoRNA	21.12	4.85	4.354639175	2.52E-06
chr17-468	chr17	26606837	26608087	+	19.8	1250	"intron (NR_028334, intron 2 of 2)"	"intron (NR_028334, intron 2 of 2)"	26946	NR_028334	284085	Hs.371796	NM_173624	ENSG00000265480	KRT18P55	-	keratin 18 pseudogene 55	pseudo	19.84	2.43	8.164609053	1.91E-09
chr17-472	chr17	32565007	32566007	+	19.8	1000	Intergenic	AT_rich|Low_complexity|Low_complexity	-16789	NM_002982	6347	Hs.303649	NM_002982	ENSG00000108691	CCL2	GDCF-2|HC11|HSMCR30|MCAF|MCP-1|MCP1|SCYA2|SMC-CF	C-C motif chemokine ligand 2	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr17-488	chr17	39758616	39759866	+	26.2	1250	Intergenic	Intergenic	9838	NM_005557	3868	Hs.655160	NM_005557	ENSG00000186832	KRT16	CK16|FNEPPK|K16|K1CP|KRT16A|NEPPK|PC1	keratin 16	protein-coding	26.24	2.91	9.017182131	6.53E-13
chr17-489	chr17	39773882	39774882	+	21.1	1000	Intergenic	Intergenic	-5303	NM_005557	3868	Hs.655160	NM_005557	ENSG00000186832	KRT16	CK16|FNEPPK|K16|K1CP|KRT16A|NEPPK|PC1	keratin 16	protein-coding	21.12	0.97	21.77319588	2.68E-16
chr17-50	chr17	62710451	62711707	+	30.1	1256	Intergenic	ERVL-E-int|LTR|ERVL	-52693	NM_022739	64750	Hs.515011	NM_022739	ENSG00000108854	SMURF2	-	SMAD specific E3 ubiquitin protein ligase 2	protein-coding	30.08	1.94	15.50515464	1.31E-19
chr17-517	chr17	66127873	66129224	+	23.7	1351	"non-coding (NR_027418, exon 6 of 6)"	"non-coding (NR_027418, exon 6 of 6)"	30852	NR_027418	100499466	Hs.591212	NR_027418		LINC00674	-	long intergenic non-protein coding RNA 674	ncRNA	23.68	3.88	6.103092784	4.22E-09
chr17-522	chr17	71729470	71730470	+	20.5	1000	Intergenic	L2|LINE|L2	-4023	NM_001278587	100134391	Hs.694655	NM_001278587		LOC100134391	-	uncharacterized LOC100134391	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr17-526	chr17	75325583	75326838	+	21.8	1255	"intron (NM_006640, intron 1 of 10)"	"intron (NM_006640, intron 1 of 10)"	10613	NM_006640	10801	Hs.440932	NM_006640	ENSG00000184640	9-Sep	AF17q25|MSF|MSF1|NAPB|PNUTL4|SINT1|SeptD1	septin 9	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr17-534	chr17	77375611	77378090	+	44.8	2479	"intron (NM_001082575, intron 2 of 14)"	"intron (NM_001082575, intron 2 of 14)"	135380	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	44.81	6.8	6.589705882	1.33E-17
chr17-542	chr17	79011438	79012438	+	20.5	1000	"intron (NM_017451, intron 1 of 14)"	"intron (NM_017451, intron 1 of 14)"	2991	NM_006340	10458	Hs.128316	NM_006340	ENSG00000175866	BAIAP2	BAP2|FLAF3|IRSP53	BAI1 associated protein 2	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr17-543	chr17	79024802	79026060	+	23.7	1258	"intron (NM_017451, intron 1 of 14)"	AluSc|SINE|Alu	16484	NM_006340	10458	Hs.128316	NM_006340	ENSG00000175866	BAIAP2	BAP2|FLAF3|IRSP53	BAI1 associated protein 2	protein-coding	23.68	1.94	12.20618557	6.71E-14
chr17-546	chr17	79081629	79082884	+	21.1	1255	"intron (NM_017451, intron 12 of 14)"	"intron (NM_017451, intron 12 of 14)"	16917	NR_030394	724027		NR_030394	ENSG00000207736	MIR657	MIRN657|hsa-mir-657	microRNA 657	ncRNA	21.12	1.94	10.88659794	9.02E-12
chr17-550	chr17	819276	820544	+	23	1268	"intron (NM_022463, intron 1 of 7)"	AluSx1|SINE|Alu	7038	NR_135633	101927727	Hs.666198	NR_135633	ENSG00000262003	LOC101927727	-	uncharacterized LOC101927727	ncRNA	23.04	3.4	6.776470588	5.45E-10
chr17-552	chr17	2628005	2629318	+	25.6	1313	Intergenic	AluSx1|SINE|Alu	13058	NR_136412	105371592	Hs.731739	NR_136412	ENSG00000262050	LOC105371592	-	uncharacterized LOC105371592	ncRNA	25.6	4.85	5.278350515	4.26E-09
chr17-553	chr17	2757513	2758894	+	25.6	1381	"intron (NM_001330058, intron 2 of 24)"	"intron (NM_001330058, intron 2 of 24)"	58471	NM_001100398	23108	Hs.499659	NM_015085	ENSG00000132359	RAP1GAP2	GARNL4|RAP1GA3	RAP1 GTPase activating protein 2	protein-coding	25.6	5.34	4.794007491	2.00E-08
chr17-554	chr17	6609274	6610560	+	21.1	1286	"intron (NM_177550, intron 3 of 11)"	"intron (NM_177550, intron 3 of 11)"	6823	NM_001284509	284111	Hs.399496	NM_177550	ENSG00000141485	SLC13A5	EIEE25|NACT|mIndy	solute carrier family 13 member 5	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr17-555	chr17	8015286	8016286	+	19.8	1000	"intron (NM_001165960, intron 6 of 15)"	"intron (NM_001165960, intron 6 of 15)"	6074	NM_021628	59344	Hs.232770	NM_021628	ENSG00000179148	ALOXE3	ARCI3|E-LOX|eLOX-3|eLOX3	arachidonate lipoxygenase 3	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr17-556	chr17	8248856	8250119	+	24.3	1263	TTS (NM_001319953)	TTS (NM_001319953)	6299	NM_153007	146852	Hs.186045	NM_153007	ENSG00000184650	ODF4	CT134|CT136|OPPO1	outer dense fiber of sperm tails 4	protein-coding	24.32	2.91	8.357388316	5.77E-12
chr17-558	chr17	9540324	9541324	+	19.2	1000	"intron (NM_001080556, intron 10 of 12)"	"intron (NM_001080556, intron 10 of 12)"	-8030	NM_153210	124739	Hs.709621	NM_153210	ENSG00000154914	USP43	-	ubiquitin specific peptidase 43	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr17-563	chr17	19699459	19701101	+	26.9	1642	"intron (NM_014683, intron 18 of 26)"	MIRb|SINE|MIR	-48534	NM_000691	218	Hs.531682	NM_000691	ENSG00000108602	ALDH3A1	ALDH3|ALDHIII	aldehyde dehydrogenase 3 family member A1	protein-coding	26.88	2.91	9.237113402	7.03E-14
chr17-572	chr17	31667765	31668765	+	19.2	1000	"intron (NM_001094, intron 1 of 9)"	MER5A|DNA|hAT-Charlie	-48259	NM_183377	40	Hs.368417	NM_001094	ENSG00000108684	ASIC2	ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1	acid sensing ion channel subunit 2	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr17-573	chr17	32199696	32200696	+	19.8	1000	"intron (NM_001094, intron 1 of 9)"	"intron (NM_001094, intron 1 of 9)"	283629	NM_001094	40	Hs.368417	NM_001094	ENSG00000108684	ASIC2	ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1	acid sensing ion channel subunit 2	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr17-578	chr17	36101696	36103003	+	23	1307	"intron (NM_001304286, intron 1 of 6)"	CpG	2720	NM_001304286	6928	Hs.191144	NM_000458	ENSG00000275410	HNF1B	FJHN|HNF-1-beta|HNF-1B|HNF1beta|HNF2|HPC11|LF-B3|LFB3|MODY5|TCF-2|TCF2|VHNF1	HNF1 homeobox B	protein-coding	23.04	0.97	23.75257732	5.03E-19
chr17-579	chr17	36121519	36122519	+	20.5	1000	Intergenic	AluY|SINE|Alu	-16950	NM_001165923	6928	Hs.191144	NM_000458	ENSG00000275410	HNF1B	FJHN|HNF-1-beta|HNF-1B|HNF1beta|HNF2|HPC11|LF-B3|LFB3|MODY5|TCF-2|TCF2|VHNF1	HNF1 homeobox B	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr17-583	chr17	36759877	36763376	+	46.7	3499	"intron (NM_025248, intron 1 of 18)"	"intron (NM_025248, intron 1 of 18)"	557	NM_025248	80725	Hs.448872	NM_025248	ENSG00000277363	SRCIN1	P140|SNIP	SRC kinase signaling inhibitor 1	protein-coding	46.73	2.43	19.23045267	4.26E-33
chr17-584	chr17	36766215	36768925	+	37.8	2710	Intergenic	AluSx|SINE|Alu	-5387	NM_025248	80725	Hs.448872	NM_025248	ENSG00000277363	SRCIN1	P140|SNIP	SRC kinase signaling inhibitor 1	protein-coding	37.76	3.88	9.731958763	5.72E-19
chr17-585	chr17	37893728	37896354	+	35.8	2626	promoter-TSS (NM_001242442)	promoter-TSS (NM_001242442)	17	NM_001242442	2886	Hs.86859	NM_005310	ENSG00000141738	GRB7	-	growth factor receptor bound protein 7	protein-coding	35.84	6.31	5.679873217	7.13E-13
chr17-587	chr17	39093637	39094637	+	19.2	1000	promoter-TSS (NM_001282433)	promoter-TSS (NM_001282433)	-242	NM_015515	25984	Hs.9029	NM_015515	ENSG00000108244	KRT23	CK23|HAIK1|K23	keratin 23	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr17-589	chr17	39659023	39660846	+	35.8	1823	"exon (NM_002274, exon 2 of 7)"	"exon (NM_002274, exon 2 of 7)"	1931	NM_002274	3860	Hs.654550	NM_002274	ENSG00000171401	KRT13	CK13|K13|WSN2	keratin 13	protein-coding	35.84	1.46	24.54794521	4.03E-29
chr17-592	chr17	41630246	41632814	+	39.7	2568	Intergenic	AluSp|SINE|Alu	-7730	NM_001079675	2118	Hs.434059	NM_001986	ENSG00000175832	ETV4	E1A-F|E1AF|PEA3|PEAS3	ETS variant 4	protein-coding	39.69	5.82	6.819587629	3.74E-16
chr17-593	chr17	41774587	41775587	+	19.2	1000	Intergenic	Intergenic	-35825	NM_001040002	4222	Hs.438	NM_004527	ENSG00000005102	MEOX1	KFS2|MOX1	mesenchyme homeobox 1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr17-596	chr17	41941179	41942179	+	20.5	1000	TTS (NM_145273)	TTS (NM_145273)	17163	NM_001168322	146894	Hs.147313	NM_145273	ENSG00000161649	CD300LG	CLM-9|CLM9|NEPMUCIN|TREM-4|TREM4	CD300 molecule like family member g	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr17-606	chr17	46571631	46572631	+	20.5	1000	Intergenic	L2c|LINE|L2	36141	NM_002144	3211	Hs.99992	NM_002144	ENSG00000120094	HOXB1	HCFP3|HOX2|HOX2I|Hox-2.9	homeobox B1	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr17-610	chr17	47555762	47556762	+	19.8	1000	Intergenic	G-rich|Low_complexity|Low_complexity	-16393	NM_002507	4804	Hs.415768	NM_002507	ENSG00000064300	NGFR	CD271|Gp80-LNGFR|TNFRSF16|p75(NTR)|p75NTR	nerve growth factor receptor	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr17-614	chr17	48672362	48674748	+	42.2	2386	"intron (NM_001256325, intron 14 of 35)"	"intron (NM_001256325, intron 14 of 35)"	-34086	NR_038439	253962	Hs.558704	NR_038439	ENSG00000250107	CACNA1G-AS1	-	CACNA1G antisense RNA 1	ncRNA	42.25	4.85	8.711340206	3.69E-20
chr17-618	chr17	56312123	56314034	+	37.1	1911	Intergenic	AluJb|SINE|Alu	-2709	NR_027647	4025	Hs.234742	NM_006151	ENSG00000167419	LPO	SPO	lactoperoxidase	protein-coding	37.12	3.4	10.91764706	1.72E-20
chr17-619	chr17	57420730	57421730	+	20.5	1000	"intron (NM_001005404, intron 1 of 4)"	L2b|LINE|L2	12177	NM_001005404	388403	Hs.463613	NM_001005404	ENSG00000175155	YPEL2	FKSG4	yippee like 2	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr17-621	chr17	63358520	63359520	+	20.5	1000	Intergenic	Intergenic	-94639	NR_131984	105827617		NR_131984	ENSG00000263520	CRAT40	-	cervical cancer-associated transcript 40	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr17-622	chr17	63454852	63455852	+	19.8	1000	TTS (NR_131984)	TTS (NR_131984)	1693	NR_131984	105827617		NR_131984	ENSG00000263520	CRAT40	-	cervical cancer-associated transcript 40	ncRNA	19.84	0.97	20.45360825	5.65E-15
chr17-623	chr17	66090314	66091827	+	23	1513	Intergenic	Intergenic	-6626	NR_027418	100499466	Hs.591212	NR_027418		LINC00674	-	long intergenic non-protein coding RNA 674	ncRNA	23.04	4.37	5.272311213	2.46E-08
chr17-624	chr17	70618604	70620884	+	37.8	2280	"intron (NR_033876, intron 2 of 4)"	"intron (NR_033876, intron 2 of 4)"	16867	NR_033876	400619	Hs.447555	NR_033876	ENSG00000227036	LINC00511	LCAL5|onco-lncRNA-12	long intergenic non-protein coding RNA 511	ncRNA	37.76	7.77	4.85971686	1.66E-11
chr17-637	chr17	77110406	77113329	+	53.1	2923	"intron (NM_001082575, intron 4 of 14)"	"intron (NM_001082575, intron 4 of 14)"	40848	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	53.13	7.28	7.298076923	1.05E-21
chr17-645	chr17	77779682	77783372	+	65.3	3690	Intergenic	MIRb|SINE|MIR	-10612	NM_020649	57332	Hs.387258	NM_020649	ENSG00000141570	CBX8	PC3|RC1	chromobox 8	protein-coding	65.29	9.71	6.723995881	2.86E-25
chr17-648	chr17	78151539	78154655	+	56.3	3116	"intron (NM_001257970, intron 1 of 14)"	L1ME3E|LINE|L1	790	NM_024110	79092	Hs.675480	NM_024110	ENSG00000141527	CARD14	BIMP2|CARMA2|PRP|PSORS2|PSS1	caspase recruitment domain family member 14	protein-coding	56.33	11.65	4.835193133	8.28E-17
chr17-652	chr17	79485668	79489971	+	70.4	4303	Intergenic	HAL1|LINE|L1	-7598	NM_001077182	25794	Hs.118555	NM_012418	ENSG00000186765	FSCN2	RFSN|RP30	"fascin actin-bundling protein 2, retinal"	protein-coding	70.41	16.02	4.395131086	8.41E-19
chr17-653	chr17	79886194	79887194	+	20.5	1000	"intron (NR_015454, intron 1 of 1)"	CpG-11376	989	NR_015454	92659	Hs.336958	NR_015454	ENSG00000265688	MAFG-AS1	-	MAFG antisense RNA 1 (head to head)	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr17-664	chr17	9000334	9002016	+	28.8	1682	"intron (NM_004822, intron 2 of 6)"	L1MC4a|LINE|L1	76316	NM_004822	9423	Hs.660885	NM_004822	ENSG00000065320	NTN1	NTN1L	netrin 1	protein-coding	28.8	5.34	5.393258427	7.39E-10
chr17-672	chr17	19656782	19658163	+	22.4	1381	Intergenic	L1M5|LINE|L1	-5726	NM_000691	218	Hs.531682	NM_000691	ENSG00000108602	ALDH3A1	ALDH3|ALDHIII	aldehyde dehydrogenase 3 family member A1	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr17-674	chr17	21155378	21156378	+	16.6	1000	"intron (NM_152914, intron 1 of 2)"	"intron (NM_152914, intron 1 of 2)"	700	NM_152914	256302	Hs.654713	NM_152914	ENSG00000274180	NATD1	C17orf103|Gtlf3b	N-acetyltransferase domain containing 1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr17-677	chr17	25777171	25778171	+	19.2	1000	Intergenic	L2c|LINE|L2	-21365	NM_014238	8844	Hs.133534	NM_014238	ENSG00000141068	KSR1	KSR|RSU2	kinase suppressor of ras 1	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr17-683	chr17	34336961	34337961	+	17.3	1000	Intergenic	HUERS-P2-int|LTR|ERV1	7544	NM_005064	6368	Hs.169191	NM_005064	ENSG00000274736	CCL23	CK-BETA-8|CKb8|Ckb-8|Ckb-8-1|MIP-3|MIP3|MPIF-1|SCYA23|hmrp-2a	C-C motif chemokine ligand 23	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr17-690	chr17	36825114	36829639	+	71.7	4525	TTS (NM_001130677)	TTS (NM_001130677)	3811	NM_001130677	100170841	Hs.445574	NM_001130677	ENSG00000273604	EPOP	C17orf96|PRR28	elongin BC and polycomb repressive complex 2 associated protein	protein-coding	71.69	10.68	6.712546816	1.53E-27
chr17-693	chr17	38216495	38217756	+	20.5	1261	Intergenic	Intergenic	-1321	NM_001190919	7067	Hs.724	NM_003250	ENSG00000126351	THRA	AR7|CHNG6|EAR7|ERB-T-1|ERBA|ERBA1|NR1A1|THRA1|THRA2|c-ERBA-1	"thyroid hormone receptor, alpha"	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr17-697	chr17	39623840	39624840	+	19.2	1000	promoter-TSS (NM_002278)	promoter-TSS (NM_002278)	-702	NM_002278	3882	Hs.41752	NM_002278	ENSG00000108759	KRT32	HA2|HKA2|KRTHA2|hHa2	keratin 32	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr17-699	chr17	40570121	40576094	+	105	5973	"intron (NM_012232, intron 1 of 1)"	"intron (NM_012232, intron 1 of 1)"	2231	NM_012232	284119	Hs.437191	NM_012232	ENSG00000177469	PTRF	CAVIN|CAVIN1|CGL4|FKSG13|cavin-1	polymerase I and transcript release factor	protein-coding	104.97	17.47	6.008586148	3.57E-36
chr17-700	chr17	41557238	41558238	+	17.9	1000	Intergenic	Intergenic	-3495	NM_001322219	1659	Hs.463105	NM_004941	ENSG00000067596	DHX8	DDX8|HRH1|PRP22|PRPF22	DEAH-box helicase 8	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr17-702	chr17	41705306	41706306	+	19.2	1000	Intergenic	Intergenic	33125	NM_013999	4222	Hs.438	NM_004527	ENSG00000005102	MEOX1	KFS2|MOX1	mesenchyme homeobox 1	protein-coding	19.2	2.43	7.901234568	1.91E-09
chr17-704	chr17	42019023	42020623	+	30.1	1600	promoter-TSS (NM_002722)	promoter-TSS (NM_002722)	12	NM_002722	5539	Hs.558368	NM_002722	ENSG00000108849	PPY	PNP|PP	pancreatic polypeptide	protein-coding	30.08	3.88	7.75257732	2.58E-13
chr17-705	chr17	42060598	42065841	+	83.9	5243	"intron (NM_004160, intron 1 of 6)"	L1ME4a|LINE|L1	18618	NM_004160	5697	Hs.169249	NM_004160	ENSG00000131096	PYY	PYY-I|PYY1	peptide YY	protein-coding	83.85	13.11	6.395881007	2.36E-30
chr17-709	chr17	42997187	42998187	+	18.6	1000	Intergenic	MARNA|DNA|TcMar-Mariner	-4767	NM_001242376	2670	Hs.514227	NM_002055	ENSG00000131095	GFAP	ALXDRD	glial fibrillary acidic protein	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr17-711	chr17	44971442	44976751	+	76.2	5309	Intergenic	Intergenic	-26387	NM_001012511	9570	Hs.463278	NM_004287	ENSG00000108433	GOSR2	Bos1|EPM6|GS27	golgi SNAP receptor complex member 2	protein-coding	76.17	13.59	5.604856512	7.31E-25
chr17-725	chr17	46777647	46779920	+	41.6	2273	Intergenic	L1MD1|LINE|L1	21099	NM_032391	84366	Hs.116467	NM_032391	ENSG00000159182	PRAC1	C17orf92|PRAC	prostate cancer susceptibility candidate 1	protein-coding	41.61	8.74	4.760869565	2.55E-12
chr17-731	chr17	46840645	46841645	+	19.2	1000	"intron (NM_001130918, intron 15 of 15)"	AluSx|SINE|Alu	30541	NM_173623	284076	Hs.91930	NM_173623	ENSG00000170703	TTLL6	TTL.6	tubulin tyrosine ligase like 6	protein-coding	19.2	1.46	13.15068493	1.82E-12
chr17-734	chr17	47543791	47550031	+	89	6240	Intergenic	Intergenic	-7800	NR_110805	101927207	Hs.638402	NR_110805	ENSG00000249497	LINC02075	-	long intergenic non-protein coding RNA 2075	ncRNA	88.97	18.44	4.82483731	3.57E-25
chr17-735	chr17	47573873	47577440	+	55	3567	"intron (NM_002507, intron 1 of 5)"	"intron (NM_002507, intron 1 of 5)"	3001	NM_002507	4804	Hs.415768	NM_002507	ENSG00000064300	NGFR	CD271|Gp80-LNGFR|TNFRSF16|p75(NTR)|p75NTR	nerve growth factor receptor	protein-coding	55.05	11.65	4.725321888	4.03E-16
chr17-739	chr17	47992556	47993825	+	22.4	1269	Intergenic	Intergenic	-53372	NM_138281	1748	Hs.591167	NM_001934	ENSG00000108813	DLX4	BP1|DLX7|DLX8|DLX9|OFC15	distal-less homeobox 4	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr17-743	chr17	48194182	48198587	+	63.4	4405	"intron (NM_174920, intron 2 of 10)"	"intron (NM_174920, intron 2 of 10)"	10862	NM_174920	201191	Hs.567769	NM_174920	ENSG00000167100	SAMD14	-	sterile alpha motif domain containing 14	protein-coding	63.37	12.62	5.021394612	5.31E-19
chr17-750	chr17	48608650	48610933	+	46.7	2283	promoter-TSS (NM_017957)	promoter-TSS (NM_017957)	-257	NM_017957	55040	Hs.670090	NM_017957	ENSG00000049283	EPN3	-	epsin 3	protein-coding	46.73	8.25	5.664242424	7.02E-16
chr17-751	chr17	48656813	48657813	+	19.2	1000	"intron (NM_001256325, intron 9 of 35)"	"intron (NM_001256325, intron 9 of 35)"	-17844	NR_038439	253962	Hs.558704	NR_038439	ENSG00000250107	CACNA1G-AS1	-	CACNA1G antisense RNA 1	ncRNA	19.2	0.97	19.79381443	5.65E-15
chr17-755	chr17	55122847	55123847	+	18.6	1000	"non-coding (NR_002818, exon 1 of 1)"	"non-coding (NR_002818, exon 1 of 1)"	508	NR_002818	376412	Hs.132299	NR_002818	ENSG00000261192	RNF126P1	-	ring finger protein 126 pseudogene 1	pseudo	18.56	0.97	19.13402062	1.12E-13
chr17-769	chr17	72046193	72048111	+	33.3	1918	Intergenic	Intergenic	-152643	NM_000999	6169	Hs.380953	NM_000999	ENSG00000172809	RPL38	L38	ribosomal protein L38	protein-coding	33.28	6.8	4.894117647	1.08E-10
chr17-770	chr17	72052862	72054114	+	22.4	1252	Intergenic	MLT1F2|LTR|ERVL-MaLR	-146307	NM_000999	6169	Hs.380953	NM_000999	ENSG00000172809	RPL38	L38	ribosomal protein L38	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr17-771	chr17	72083434	72084434	+	19.2	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	-115861	NM_000999	6169	Hs.380953	NM_000999	ENSG00000172809	RPL38	L38	ribosomal protein L38	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr17-772	chr17	72152850	72153850	+	17.3	1000	Intergenic	L3|LINE|CR1	-46445	NM_000999	6169	Hs.380953	NM_000999	ENSG00000172809	RPL38	L38	ribosomal protein L38	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr17-773	chr17	72677757	72678757	+	19.2	1000	"intron (NM_175738, intron 1 of 8)"	MIRc|SINE|MIR	11001	NM_175738	326624	Hs.351413	NM_175738	ENSG00000172794	RAB37	-	"RAB37, member RAS oncogene family"	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr17-774	chr17	72887359	72888631	+	20.5	1272	"intron (NM_178128, intron 3 of 6)"	"intron (NM_178128, intron 3 of 6)"	1914	NM_178128	283985	Hs.448845	NM_178128	ENSG00000172782	FADS6	FP18279	fatty acid desaturase 6	protein-coding	20.48	0.49	41.79591837	5.97E-21
chr17-775	chr17	72971155	72972155	+	19.2	1000	"non-coding (NR_110878, exon 3 of 3)"	"non-coding (NR_110878, exon 3 of 3)"	-2755	NM_030630	283987	Hs.11067	NM_030630	ENSG00000167861	HID1	C17orf28|DMC1|HID-1	HID1 domain containing	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr17-776	chr17	74126493	74127920	+	21.8	1427	Intergenic	Intergenic	-9431	NR_040017	100507218	Hs.654866	NR_040017	ENSG00000267128	RNF157-AS1	-	RNF157 antisense RNA 1	ncRNA	21.76	1.94	11.21649485	8.00E-13
chr17-780	chr17	74929777	74931044	+	22.4	1267	"intron (NM_198955, intron 10 of 15)"	MIRb|SINE|MIR	34871	NR_136417	105371899	Hs.634683	NR_136416	ENSG00000267568	LOC105371899	-	uncharacterized LOC105371899	ncRNA	22.4	3.4	6.588235294	3.73E-09
chr17-781	chr17	75651182	75652956	+	30.7	1774	Intergenic	Intergenic	72572	NR_104134	100132174	Hs.640110	NR_104134	ENSG00000267790	LINC01987	-	long intergenic non-protein coding RNA 1987	ncRNA	30.72	4.85	6.334020619	3.34E-12
chr17-782	chr17	76355230	76356697	+	21.8	1467	promoter-TSS (NR_110845)	promoter-TSS (NR_110845)	197	NM_003955	9021	Hs.527973	NM_003955	ENSG00000184557	SOCS3	ATOD4|CIS3|Cish3|SOCS-3|SSI-3|SSI3	suppressor of cytokine signaling 3	protein-coding	21.76	0	22.41535789	1.33E-22
chr17-788	chr17	77529499	77532773	+	49.3	3274	Intergenic	MLT1L|LTR|ERVL-MaLR	-18906	NM_001082575	146713	Hs.135229	NM_001025448	ENSG00000167281	RBFOX3	FOX-3|FOX3|HRNBP3|NEUN	"RNA binding protein, fox-1 homolog 3"	protein-coding	49.29	5.34	9.230337079	1.22E-23
chr17-795	chr17	79055019	79056396	+	23.7	1377	"intron (NM_017451, intron 3 of 14)"	"intron (NM_017451, intron 3 of 14)"	43466	NR_030394	724027		NR_030394	ENSG00000207736	MIR657	MIRN657|hsa-mir-657	microRNA 657	ncRNA	23.68	1.94	12.20618557	6.71E-14
chr17-801	chr17	80293861	80295119	+	23	1258	Intergenic	Intergenic	-2569	NM_003004	6398	Hs.558009	NM_003004	ENSG00000141574	SECTM1	K12	secreted and transmembrane 1	protein-coding	23.04	4.37	5.272311213	2.46E-08
chr17-804	chr17	840480	841735	+	23	1255	"intron (NM_022463, intron 1 of 7)"	"intron (NM_022463, intron 1 of 7)"	28235	NR_135633	101927727	Hs.666198	NR_135633	ENSG00000262003	LOC101927727	-	uncharacterized LOC101927727	ncRNA	23.04	2.43	9.481481481	2.61E-12
chr17-806	chr17	1927119	1929105	+	35.2	1986	"intron (NM_178568, intron 1 of 1)"	CpG	527	NM_178568	146760	Hs.22917	NM_178568	ENSG00000185924	RTN4RL1	NGRH2|NgR3	reticulon 4 receptor like 1	protein-coding	35.2	2.91	12.09621993	4.47E-20
chr17-811	chr17	5860352	5862404	+	36.5	2052	Intergenic	Intergenic	-112556	NM_015253	23302	Hs.370166	NM_015253	ENSG00000179314	WSCD1	-	WSC domain containing 1	protein-coding	36.48	4.85	7.521649485	1.37E-15
chr17-815	chr17	7948331	7950947	+	39.7	2616	"intron (NM_001039131, intron 8 of 11)"	"intron (NM_001039131, intron 8 of 11)"	7281	NM_001141	247	Hs.111256	NM_001141	ENSG00000179593	ALOX15B	15-LOX-2	"arachidonate 15-lipoxygenase, type B"	protein-coding	39.69	3.88	10.22938144	5.62E-21
chr17-818	chr17	10212835	10213835	+	17.3	1000	"intron (NM_003802, intron 33 of 40)"	FLAM_C|SINE|Alu	62987	NM_003802	8735	Hs.711142	NM_003802	ENSG00000006788	MYH13	MyHC-IIL|MyHC-eo	myosin heavy chain 13	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr17-819	chr17	10696778	10698051	+	19.8	1273	TTS (NR_036581)	TTS (NR_036581)	10002	NR_036581	100289255	Hs.306721	NR_036581	ENSG00000263429	LINC00675	-	long intergenic non-protein coding RNA 675	ncRNA	19.84	4.85	4.090721649	1.08E-05
chr17-820	chr17	10754475	10755739	+	22.4	1264	Intergenic	MLT1J|LTR|ERVL-MaLR	-13689	NM_001101387	644139	Hs.553909	NM_001101387	ENSG00000233670	PIRT	-	phosphoinositide interacting regulator of transient receptor potential channels	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr17-821	chr17	14199050	14205664	+	107.5	6614	Intergenic	Intergenic	-2010	NM_006041	9953	Hs.48384	NM_006041	ENSG00000125430	HS3ST3B1	3-OST-3B|3OST3B1|h3-OST-3B	heparan sulfate-glucosamine 3-sulfotransferase 3B1	protein-coding	107.53	18.44	5.831344902	4.22E-36
chr17-825	chr17	15247195	15248195	+	18.6	1000	Intergenic	AluSp|SINE|Alu	-2737	NM_031898	64518	Hs.414648	NM_031898	ENSG00000125409	TEKT3	-	tektin 3	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr17-828	chr17	21221722	21222722	+	19.2	1000	Intergenic	MSTD|LTR|ERVL-MaLR	30874	NM_002756	5606	Hs.514012	NM_002756	ENSG00000034152	MAP2K3	MAPKK3|MEK3|MKK3|PRKMK3|SAPKK-2|SAPKK2	mitogen-activated protein kinase kinase 3	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr17-844	chr17	28889664	28890664	+	19.2	1000	"intron (NM_015594, intron 4 of 4)"	"intron (NM_015594, intron 4 of 4)"	3580	NM_015594	26083	Hs.241421	NM_015594	ENSG00000266733	TBC1D29	-	TBC1 domain family member 29	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr17-845	chr17	29826425	29827709	+	21.1	1284	"intron (NM_001346748, intron 1 of 12)"	"intron (NM_001346748, intron 1 of 12)"	12048	NM_001346747	84440	Hs.406788	NM_032932	ENSG00000131242	RAB11FIP4	FIP4-Rab11|RAB11-FIP4	RAB11 family interacting protein 4	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr17-849	chr17	32190813	32191813	+	19.2	1000	"intron (NM_001094, intron 1 of 9)"	MER113|DNA|hAT-Charlie	292512	NM_001094	40	Hs.368417	NM_001094	ENSG00000108684	ASIC2	ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1	acid sensing ion channel subunit 2	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr17-850	chr17	32885906	32887166	+	23	1260	Intergenic	Tigger3|DNA|TcMar-Tigger	19852	NM_207454	400591	Hs.514090	NM_207454		C17orf102	-	chromosome 17 open reading frame 102	protein-coding	23.04	2.43	9.481481481	2.61E-12
chr17-851	chr17	32953155	32954419	+	22.4	1264	"exon (NM_001304438, exon 2 of 9)"	"exon (NM_001304438, exon 2 of 9)"	46019	NM_001304438	124842	Hs.310482	NM_207313	ENSG00000181291	TMEM132E	DFNB99	transmembrane protein 132E	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr17-856	chr17	35287316	35296360	+	153	9044	"intron (NR_135668, intron 1 of 1)"	"intron (NR_135668, intron 1 of 1)"	2122	NR_135669	102723471	Hs.567930	NR_135668	ENSG00000277268	LOC102723471	-	uncharacterized LOC102723471	ncRNA	152.98	24.27	6.303255047	1.42E-53
chr17-859	chr17	37293868	37294868	+	17.9	1000	"intron (NM_020405, intron 2 of 13)"	AluJb|SINE|Alu	13534	NM_020405	57125	Hs.125036	NM_020405	ENSG00000161381	PLXDC1	TEM3|TEM7	plexin domain containing 1	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr17-861	chr17	38953704	38955166	+	22.4	1462	"intron (NM_181535, intron 3 of 7)"	"intron (NM_181535, intron 3 of 7)"	1776	NM_181535	162605	Hs.59736	NM_181535	ENSG00000173908	KRT28	K25IRS4|KRT25D	keratin 28	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr17-864	chr17	39778503	39779768	+	21.8	1265	"intron (NM_000422, intron 2 of 7)"	"intron (NM_000422, intron 2 of 7)"	1747	NM_000422	3872	Hs.2785	NM_000422	ENSG00000128422	KRT17	39.1|CK-17|K17|PC|PC2|PCHC1	keratin 17	protein-coding	21.76	2.43	8.95473251	2.49E-11
chr17-866	chr17	41623775	41625297	+	21.1	1522	promoter-TSS (NM_001079675)	promoter-TSS (NM_001079675)	-736	NM_001079675	2118	Hs.434059	NM_001986	ENSG00000175832	ETV4	E1A-F|E1AF|PEA3|PEAS3	ETS variant 4	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr17-870	chr17	42391519	42392519	+	16.6	1000	"intron (NM_001144825, intron 4 of 10)"	"intron (NM_001144825, intron 4 of 10)"	6092	NM_006695	10900	Hs.500197	NM_006695	ENSG00000108309	RUNDC3A	RAP2IP|RPIP-8|RPIP8	RUN domain containing 3A	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr17-871	chr17	42673663	42674663	+	18.6	1000	Intergenic	AluSx|SINE|Alu	39351	NM_001466	2535	Hs.142912	NM_001466	ENSG00000180340	FZD2	Fz2|fz-2|fzE2|hFz2	frizzled class receptor 2	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr17-891	chr17	47198133	47199401	+	23	1268	Intergenic	Intergenic	-11055	NM_001159388	124872	Hs.374679	NM_153446	ENSG00000167080	B4GALNT2	B4GALT|GALGT2	"beta-1,4-N-acetyl-galactosaminyltransferase 2"	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr17-895	chr17	47963005	47964366	+	22.4	1361	Intergenic	Intergenic	-38306	NM_001077504	255061	Hs.652130	NM_170685	ENSG00000176358	TAC4	EK|HK-1|HK1|PPT-C	tachykinin 4 (hemokinin)	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr17-898	chr17	48401741	48403027	+	17.9	1286	Intergenic	MLT2B3|LTR|ERVL	-21009	NR_110010	64132	Hs.463416	NM_022167	ENSG00000015532	XYLT2	PXYLT2|SOS|XT-II|XT2|xylT-II	xylosyltransferase 2	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr17-900	chr17	56031153	56035578	+	72.3	4425	promoter-TSS (NM_001271875)	promoter-TSS (NM_001271875)	-681	NM_001271875	404093	Hs.46679	NM_001271875	ENSG00000180891	CUEDC1	-	CUE domain containing 1	protein-coding	72.33	9.71	7.449021627	1.54E-29
chr17-903	chr17	59504837	59505837	+	17.9	1000	Intergenic	THE1D|LTR|ERVL-MaLR	16225	NM_203425	388407	Hs.434459	NM_203425		C17orf82	-	chromosome 17 open reading frame 82	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr17-904	chr17	60172362	60173362	+	17.9	1000	Intergenic	AluSq|SINE|Alu	-30219	NM_005121	9969	Hs.282678	NM_005121	ENSG00000108510	MED13	ARC250|DRIP250|HSPC221|THRAP1|TRAP240	mediator complex subunit 13	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr17-906	chr17	61978616	61979937	+	23	1321	Intergenic	Intergenic	-5255	NM_001317	1442	Hs.654390	NM_001317	ENSG00000136488	CSH1	CS-1|CSA|CSMT|GHB3|PL|hCS-1|hCS-A	chorionic somatomammotropin hormone 1	protein-coding	23.04	3.4	6.776470588	5.45E-10
chr17-916	chr17	64978284	64982336	+	56.3	4052	"intron (NM_014405, intron 1 of 3)"	AluJr|SINE|Alu	19330	NM_014405	27092	Hs.514423	NM_014405	ENSG00000075461	CACNG4	-	calcium voltage-gated channel auxiliary subunit gamma 4	protein-coding	56.33	10.68	5.274344569	3.77E-18
chr17-918	chr17	65991725	65995388	+	48	3663	Intergenic	AluSx3|SINE|Alu	-3791	NM_181656	284018	Hs.90790	NM_181655	ENSG00000186665	C17orf58	-	chromosome 17 open reading frame 58	protein-coding	48.01	11.16	4.301971326	9.69E-13
chr17-920	chr17	66096548	66097814	+	22.4	1266	promoter-TSS (NR_027418)	promoter-TSS (NR_027418)	-515	NR_027418	100499466	Hs.591212	NR_027418		LINC00674	-	long intergenic non-protein coding RNA 674	ncRNA	22.4	1.94	11.54639175	8.00E-13
chr17-921	chr17	66143063	66144387	+	22.4	1324	Intergenic	Intergenic	46029	NR_027418	100499466	Hs.591212	NR_027418		LINC00674	-	long intergenic non-protein coding RNA 674	ncRNA	22.4	3.88	5.773195876	2.53E-08
chr17-923	chr17	70608488	70609488	+	17.3	1000	"intron (NR_033876, intron 3 of 4)"	"intron (NR_033876, intron 3 of 4)"	-20043	NR_137280	100499467	Hs.157726	NR_036488		LINC00673	HI-LNC75|HILNC75|LUCAIR1|SLNCR|SLNCR1	long intergenic non-protein coding RNA 673	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr17-925	chr17	71344296	71345554	+	21.8	1258	"intron (NM_001144952, intron 43 of 44)"	"intron (NM_001144952, intron 43 of 44)"	-36782	NM_012121	23580	Hs.3903	NM_012121	ENSG00000179604	CDC42EP4	BORG4|CEP4|KAIA1777	CDC42 effector protein 4	protein-coding	21.76	2.43	8.95473251	2.49E-11
chr17-926	chr17	71351926	71353189	+	19.8	1263	"intron (NM_001144952, intron 40 of 44)"	"intron (NM_001144952, intron 40 of 44)"	-44414	NM_012121	23580	Hs.3903	NM_012121	ENSG00000179604	CDC42EP4	BORG4|CEP4|KAIA1777	CDC42 effector protein 4	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr17-928	chr17	71492926	71495385	+	46.7	2459	"intron (NM_001144952, intron 2 of 44)"	"intron (NM_001144952, intron 2 of 44)"	-15667	NR_135635	101928251	Hs.434726	NR_135635	ENSG00000264985	LOC101928251	-	uncharacterized LOC101928251	ncRNA	46.73	5.82	8.029209622	1.58E-20
chr17-93	chr17	46680641	46683973	+	61.4	3332	promoter-TSS (NM_018952)	promoter-TSS (NM_018952)	27	NM_018952	3216	Hs.98428	NM_018952	ENSG00000108511	HOXB6	HOX2|HOX2B|HU-2|Hox-2.2	homeobox B6	protein-coding	61.45	8.74	7.030892449	1.11E-24
chr17-934	chr17	72917957	72919234	+	19.8	1277	"intron (NM_173477, intron 1 of 2)"	"intron (NM_173477, intron 1 of 2)"	763	NM_001282489	124590	Hs.376688	NM_173477	ENSG00000182040	USH1G	ANKS4A|SANS	USH1 protein network component sans	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr17-939	chr17	74886419	74887419	+	17.9	1000	"intron (NM_198955, intron 2 of 15)"	MLT1A0|LTR|ERVL-MaLR	18190	NM_198955	146664	Hs.144531	NM_144677	ENSG00000167889	MGAT5B	GnT-IX|GnT-VB	"mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B"	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr17-942	chr17	75551359	75553008	+	29.4	1649	"intron (NR_040050, intron 1 of 1)"	"intron (NR_040050, intron 1 of 1)"	9160	NR_040050	100507351	Hs.514518	NR_040050		LOC100507351	-	uncharacterized LOC100507351	ncRNA	29.44	6.31	4.665610143	3.01E-09
chr17-947	chr17	76360108	76363678	+	76.2	3570	TTS (NR_110845)	TTS (NR_110845)	4810	NR_110846	101928674	Hs.637297	NR_110845	ENSG00000266970	LOC101928674	-	uncharacterized LOC101928674	ncRNA	76.17	12.13	6.279472383	2.78E-27
chr17-948	chr17	77171433	77174515	+	60.2	3082	"intron (NM_001082575, intron 4 of 14)"	"intron (NM_001082575, intron 4 of 14)"	101955	NM_001042573	64772	Hs.29288	NM_022759	ENSG00000167280	ENGASE	-	endo-beta-N-acetylglucosaminidase	protein-coding	60.17	6.8	8.848529412	2.54E-28
chr17-955	chr17	77743386	77748450	+	73	5064	Intergenic	AluSp|SINE|Alu	-6059	NM_005189	84733	Hs.368410	NM_005189	ENSG00000173894	CBX2	CDCA6|M33|SRXY5	chromobox 2	protein-coding	72.97	11.65	6.263519313	1.51E-26
chr17-961	chr17	79275842	79277961	+	38.4	2119	"non-coding (NR_038080, exon 4 of 4)"	"non-coding (NR_038080, exon 4 of 4)"	6147	NR_038080	284185	Hs.631762	NM_178519		LINC00482	C17orf55	long intergenic non-protein coding RNA 482	ncRNA	38.4	4.85	7.917525773	2.24E-17
chr17-965	chr17	80287945	80292170	+	73	4225	"intron (NM_003004, intron 1 of 4)"	"intron (NM_003004, intron 1 of 4)"	1864	NM_003004	6398	Hs.558009	NM_003004	ENSG00000141574	SECTM1	K12	secreted and transmembrane 1	protein-coding	72.97	8.74	8.348970252	1.06E-32
chr17-966	chr17	81033901	81040052	+	92.2	6151	promoter-TSS (NM_001004431)	promoter-TSS (NM_001004431)	-591	NM_001004431	284207	Hs.378821	NM_001004431	ENSG00000176845	METRNL	-	"meteorin like, glial cell differentiation regulator"	protein-coding	92.17	9.71	9.492276004	2.07E-44
chr17-968	chr17	1954375	1955629	+	21.1	1254	Intergenic	CpG	-1328	NR_029625	406994		NR_029625	ENSG00000267195	MIR212	MIRN212|mir-212	microRNA 212	ncRNA	21.12	1.94	10.88659794	9.02E-12
chr17-970	chr17	3431430	3432430	+	17.9	1000	"intron (NM_001258205, intron 10 of 17)"	"intron (NM_001258205, intron 10 of 17)"	-14784	NM_001321336	84690	Hs.351068	NM_032598	ENSG00000141255	SPATA22	NYD-SP20|NYDSP20	spermatogenesis associated 22	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr17-973	chr17	5520040	5521558	+	26.9	1518	Intergenic	HAL1|LINE|L1	-32967	NM_033007	22861	Hs.652273	NM_014922	ENSG00000091592	NLRP1	CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|NAC|NALP1|PP1044|SLEV1|VAMAS1	NLR family pyrin domain containing 1	protein-coding	26.88	3.4	7.905882353	1.25E-12
chr17-974	chr17	5545322	5546583	+	17.9	1261	Intergenic	Intergenic	-58120	NM_033007	22861	Hs.652273	NM_014922	ENSG00000091592	NLRP1	CARD7|CIDED|CLR17.1|DEFCAP|DEFCAP-L/S|NAC|NALP1|PP1044|SLEV1|VAMAS1	NLR family pyrin domain containing 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr17-976	chr17	5667985	5668985	+	16.6	1000	Intergenic	Intergenic	-7069	NR_040000	339166	Hs.736088	NR_040000	ENSG00000179314	LOC339166	-	uncharacterized LOC339166	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr17-981	chr17	7671345	7672345	+	16	1000	"intron (NM_020877, intron 24 of 85)"	L1MA8|LINE|L1	14207	NR_002778	118432	Hs.658086	NR_002778	ENSG00000240480	RPL29P2	RPL29_10_1510	ribosomal protein L29 pseudogene 2	pseudo	16	3.88	4.12371134	7.91E-05
chr17-982	chr17	7680042	7681371	+	21.8	1329	"intron (NM_020877, intron 32 of 85)"	"intron (NM_020877, intron 32 of 85)"	23068	NR_002778	118432	Hs.658086	NR_002778	ENSG00000240480	RPL29P2	RPL29_10_1510	ribosomal protein L29 pseudogene 2	pseudo	21.76	2.43	8.95473251	2.49E-11
chr17-983	chr17	8215737	8217224	+	22.4	1487	"exon (NM_173728, exon 3 of 16)"	"exon (NM_173728, exon 3 of 16)"	2340	NM_025014	22899	Hs.443109	NM_025014	ENSG00000198844	ARHGEF15	ARGEF15|E5|Ephexin5|Vsm-RhoGEF	Rho guanine nucleotide exchange factor 15	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr17-985	chr17	9778134	9779753	+	25.6	1619	"intron (NM_004246, intron 10 of 12)"	"intron (NM_004246, intron 10 of 12)"	29741	NM_002903	5957	Hs.80539	NM_002903	ENSG00000109047	RCVRN	RCV1	recoverin	protein-coding	25.6	2.91	8.797250859	6.53E-13
chr17-990	chr17	16823387	16824387	+	16.6	1000	Intergenic	Intergenic	51515	NM_012452	23495	Hs.158341	NM_012452	ENSG00000240505	TNFRSF13B	CD267|CVID|CVID2|IGAD2|RYZN|TACI|TNFRSF14B	TNF receptor superfamily member 13B	protein-coding	16.64	0	17.14115603	3.68E-16
chr17-992	chr17	19317563	19320302	+	39.7	2739	"intron (NM_007148, intron 13 of 13)"	"intron (NM_007148, intron 13 of 13)"	4441	NM_007148	7732	Hs.189482	NM_007148	ENSG00000128482	RNF112	BFP|ZNF179	ring finger protein 112	protein-coding	39.69	7.77	5.108108108	6.49E-13
chr17-997	chr17	21412630	21415643	+	50.6	3013	Intergenic	L1MA7|LINE|L1	40805	NM_001113434	339263	Hs.514016	NM_001113434	ENSG00000212719	C17orf51	-	chromosome 17 open reading frame 51	protein-coding	50.57	6.8	7.436764706	5.24E-21
chr18-100	chr18	45985020	45987800	+	44.8	2780	Intergenic	THE1B|LTR|ERVL-MaLR	-50617	NM_001318841	201501	Hs.515388	NM_001039360	ENSG00000184828	ZBTB7C	APM-1|APM1|ZBTB36|ZNF857C	zinc finger and BTB domain containing 7C	protein-coding	44.81	9.22	4.860086768	9.30E-14
chr18-101	chr18	46067088	46068088	+	18.6	1000	"intron (NM_001142397, intron 2 of 12)"	CpG-11781	2161	NM_001142397	9811	Hs.145230	NM_014772	ENSG00000134030	CTIF	Gm672|KIAA0427	cap binding complex dependent translation initiation factor	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr18-107	chr18	61627334	61628334	+	17.9	1000	TTS (NM_001123366)	TTS (NM_001123366)	-9429	NM_001031848	5271	Hs.368077	NM_002640	ENSG00000166401	SERPINB8	CAP2|PI8|PSS5	serpin family B member 8	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr18-108	chr18	61681626	61682626	+	17.9	1000	Intergenic	Intergenic	44863	NM_198833	5271	Hs.368077	NM_002640	ENSG00000166401	SERPINB8	CAP2|PI8|PSS5	serpin family B member 8	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr18-112	chr18	75203315	75204597	+	20.5	1282	Intergenic	Intergenic	241948	NM_001480	2587	Hs.272191	NM_001480	ENSG00000166573	GALR1	GALNR|GALNR1	galanin receptor 1	protein-coding	20.48	0	21.09680742	5.97E-21
chr18-115	chr18	479607	481614	+	33.3	2007	"intron (NM_130386, intron 2 of 9)"	"intron (NM_130386, intron 2 of 9)"	20119	NM_130386	81035	Hs.464422	NM_030781	ENSG00000158270	COLEC12	CLP1|NSR2|SCARA4|SRCL	collectin subfamily member 12	protein-coding	33.28	7.77	4.283140283	1.68E-09
chr18-116	chr18	2845488	2848211	+	44.2	2723	promoter-TSS (NM_032048)	promoter-TSS (NM_032048)	-179	NM_032048	84034	Hs.532815	NM_032048	ENSG00000132205	EMILIN2	EMILIN-2|FOAP-10	elastin microfibril interfacer 2	protein-coding	44.17	6.31	7	1.02E-17
chr18-118	chr18	7567154	7569656	+	35.2	2502	"intron (NM_001105244, intron 1 of 32)"	CpG	1091	NM_001105244	5797	Hs.49774	NM_002845	ENSG00000173482	PTPRM	PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu	"protein tyrosine phosphatase, receptor type M"	protein-coding	35.2	2.43	14.48559671	4.68E-22
chr18-120	chr18	10067011	10068011	+	17.9	1000	Intergenic	Intergenic	153556	NM_003574	9218	Hs.165195	NM_003574	ENSG00000101558	VAPA	VAP-33|VAP-A|VAP33|hVAP-33	VAMP associated protein A	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr18-121	chr18	13824713	13826060	+	21.8	1347	promoter-TSS (NM_005913)	promoter-TSS (NM_005913)	-157	NM_005913	4161	Hs.248145	NM_005913	ENSG00000176136	MC5R	MC2	melanocortin 5 receptor	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr18-124	chr18	20139813	20140813	+	15.4	1000	Intergenic	Intergenic	-142435	NM_172241	64693	Hs.406709	NM_022663	ENSG00000212710	CTAGE1	CT21.1|CT21.2|CTAGE|CTAGE-1|CTAGE-2	cutaneous T-cell lymphoma-associated antigen 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr18-131	chr18	45684613	45685613	+	16	1000	"intron (NM_001318841, intron 3 of 4)"	"intron (NM_001318841, intron 3 of 4)"	-21433	NM_001039360	201501	Hs.515388	NM_001039360	ENSG00000184828	ZBTB7C	APM-1|APM1|ZBTB36|ZNF857C	zinc finger and BTB domain containing 7C	protein-coding	16	2.43	6.58436214	7.90E-07
chr18-132	chr18	45688945	45689945	+	17.3	1000	"intron (NM_001318841, intron 3 of 4)"	"intron (NM_001318841, intron 3 of 4)"	-25765	NM_001039360	201501	Hs.515388	NM_001039360	ENSG00000184828	ZBTB7C	APM-1|APM1|ZBTB36|ZNF857C	zinc finger and BTB domain containing 7C	protein-coding	17.28	0	17.80043126	3.68E-16
chr18-135	chr18	45929126	45930126	+	17.9	1000	"intron (NM_001318841, intron 1 of 4)"	"intron (NM_001318841, intron 1 of 4)"	6167	NM_001318841	201501	Hs.515388	NM_001039360	ENSG00000184828	ZBTB7C	APM-1|APM1|ZBTB36|ZNF857C	zinc finger and BTB domain containing 7C	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr18-136	chr18	46139823	46140823	+	17.9	1000	"intron (NM_001142397, intron 2 of 12)"	"intron (NM_001142397, intron 2 of 12)"	-56648	NR_039897	100616366		NR_039897	ENSG00000266276	MIR4743	-	microRNA 4743	ncRNA	17.92	0.97	18.4742268	1.12E-13
chr18-138	chr18	46244551	46246190	+	23	1639	"intron (NM_014772, intron 7 of 11)"	L3|LINE|CR1	48399	NR_039897	100616366		NR_039897	ENSG00000266276	MIR4743	-	microRNA 4743	ncRNA	23.04	2.91	7.917525773	4.85E-11
chr18-139	chr18	46344541	46345541	+	17.3	1000	"intron (NM_014772, intron 10 of 11)"	"intron (NM_014772, intron 10 of 11)"	124136	NM_001190823	4092	Hs.465087	NM_005904	ENSG00000101665	SMAD7	CRCS3|MADH7|MADH8	SMAD family member 7	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr18-142	chr18	54819242	54820242	+	17.9	1000	Intergenic	Intergenic	5449	NM_001257964	284257	Hs.127882	NM_001257964	ENSG00000228075	BOD1L2	BOD1P|FAM44C	biorientation of chromosomes in cell division 1 like 2	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr18-144	chr18	55711782	55714605	+	37.8	2823	"intron (NM_001144967, intron 1 of 30)"	"intron (NM_001144967, intron 1 of 30)"	-1265	NM_001144964	23327	Hs.185677	NM_015277	ENSG00000049759	NEDD4L	NEDD4-2|NEDD4.2|PVNH7|RSP5|hNEDD4-2	"neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase"	protein-coding	37.76	1.94	19.46391753	4.60E-27
chr18-148	chr18	76577494	76578494	+	16.6	1000	Intergenic	Intergenic	-162281	NM_171999	27164	Hs.700557	NM_171999	ENSG00000256463	SALL3	ZNF796	spalt like transcription factor 3	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr18-149	chr18	77946550	77948067	+	28.2	1517	"intron (NM_032510, intron 2 of 2)"	"intron (NM_032510, intron 2 of 2)"	41501	NR_028340	100130522	Hs.352602	NM_001145731	ENSG00000267270	PARD6G-AS1	-	PARD6G antisense RNA 1	ncRNA	28.16	4.85	5.806185567	1.30E-10
chr18-152	chr18	574333	575333	+	16	1000	Intergenic	Intergenic	-5510	NM_004066	1068	Hs.122511	NM_004066	ENSG00000177143	CETN1	CEN1|CETN	centrin 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr18-155	chr18	2107371	2108371	+	16	1000	Intergenic	AluSz6|SINE|Alu	463631	NM_022840	64863	Hs.126888	NM_022840	ENSG00000101574	METTL4	HsT661	methyltransferase like 4	protein-coding	16	1.94	8.24742268	7.67E-08
chr18-156	chr18	10035280	10036648	+	22.4	1368	Intergenic	Intergenic	122009	NM_003574	9218	Hs.165195	NM_003574	ENSG00000101558	VAPA	VAP-33|VAP-A|VAP33|hVAP-33	VAMP associated protein A	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr18-158	chr18	11865366	11866366	+	16.6	1000	"intron (NM_001142339, intron 8 of 12)"	"intron (NM_001142339, intron 8 of 12)"	8429	NM_001261444	2774	Hs.136295	NM_002071	ENSG00000141404	GNAL	DYT25	G protein subunit alpha L	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr18-159	chr18	19737239	19738239	+	15.4	1000	Intergenic	AluSx|SINE|Alu	11190	NR_102763	100128893	Hs.514745	NR_102763	ENSG00000266010	GATA6-AS1	BM742401|locus5689	GATA6 antisense RNA 1 (head to head)	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr18-164	chr18	22036731	22037731	+	17.3	1000	Intergenic	AluSz|SINE|Alu	-3362	NM_001143828	59340	Hs.287388	NM_021624	ENSG00000134489	HRH4	AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R	histamine receptor H4	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr18-165	chr18	24656087	24657087	+	17.3	1000	"intron (NM_031422, intron 2 of 5)"	"intron (NM_031422, intron 2 of 5)"	108715	NM_001256316	83539	Hs.44584	NM_031422	ENSG00000154080	CHST9	GALNAC4ST-2|GalNAc4ST2	carbohydrate sulfotransferase 9	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr18-169	chr18	35076788	35078108	+	20.5	1320	"intron (NM_001025087, intron 1 of 12)"	AluSg|SINE|Alu	-30981	NR_132967	106635546		NR_132967		SNORA111	-	"small nucleolar RNA, H/ACA box 111"	snoRNA	20.48	4.37	4.686498856	6.64E-07
chr18-171	chr18	43136399	43137704	+	20.5	1305	"intron (NM_001242692, intron 2 of 20)"	"intron (NM_001242692, intron 2 of 20)"	-50050	NR_110899	101927980	Hs.591058	NR_110899		SLC14A2-AS1	-	SLC14A2 antisense RNA 1	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr18-172	chr18	43215351	43216351	+	15.4	1000	"intron (NM_007163, intron 5 of 19)"	L2a|LINE|L2	21085	NM_007163	8170	Hs.710927	NM_007163	ENSG00000132874	SLC14A2	HUT2|UT-A2|UT2|UTA|UTR|hUT-A6	solute carrier family 14 member 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr18-174	chr18	45218806	45219806	+	16.6	1000	Intergenic	MIRb|SINE|MIR	237664	NM_005901	4087	Hs.12253	NM_005901	ENSG00000175387	SMAD2	JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2	SMAD family member 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr18-175	chr18	45598450	45601108	+	43.5	2658	"intron (NM_001318841, intron 3 of 4)"	"intron (NM_001318841, intron 3 of 4)"	63901	NM_001039360	201501	Hs.515388	NM_001039360	ENSG00000184828	ZBTB7C	APM-1|APM1|ZBTB36|ZNF857C	zinc finger and BTB domain containing 7C	protein-coding	43.53	7.77	5.602316602	3.96E-15
chr18-176	chr18	46187126	46188794	+	24.3	1668	"intron (NM_014772, intron 3 of 11)"	"intron (NM_014772, intron 3 of 11)"	-9011	NR_039897	100616366		NR_039897	ENSG00000266276	MIR4743	-	microRNA 4743	ncRNA	24.32	0.97	25.07216495	2.01E-20
chr18-177	chr18	46235824	46236824	+	17.3	1000	"intron (NM_014772, intron 6 of 11)"	"intron (NM_014772, intron 6 of 11)"	39353	NR_039897	100616366		NR_039897	ENSG00000266276	MIR4743	-	microRNA 4743	ncRNA	17.28	0	17.80043126	3.68E-16
chr18-180	chr18	47092805	47094715	+	30.7	1910	"intron (NM_006033, intron 2 of 9)"	"intron (NM_006033, intron 2 of 9)"	5359	NM_001308006	9388	Hs.465102	NM_006033	ENSG00000101670	LIPG	EDL|EL|PRO719	"lipase G, endothelial type"	protein-coding	30.72	1.94	15.83505155	8.26E-21
chr18-181	chr18	47096537	47097537	+	16	1000	"intron (NM_001308006, intron 4 of 8)"	AluSg|SINE|Alu	8636	NM_001308006	9388	Hs.465102	NM_006033	ENSG00000101670	LIPG	EDL|EL|PRO719	"lipase G, endothelial type"	protein-coding	16	3.88	4.12371134	7.91E-05
chr18-182	chr18	47927935	47928935	+	16	1000	Intergenic	HERVS71-int|LTR|ERV1	27043	NM_001039535	220134	Hs.134726	NM_145060	ENSG00000154839	SKA1	C18orf24	spindle and kinetochore associated complex subunit 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr18-184	chr18	52397719	52398719	+	16.6	1000	Intergenic	Intergenic	-97489	NM_004163	5874	Hs.25318	NM_004163	ENSG00000041353	RAB27B	C25KG	"RAB27B, member RAS oncogene family"	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr18-185	chr18	54796518	54797518	+	16.6	1000	Intergenic	MIR3|SINE|MIR	-17275	NM_001257964	284257	Hs.127882	NM_001257964	ENSG00000228075	BOD1L2	BOD1P|FAM44C	biorientation of chromosomes in cell division 1 like 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr18-188	chr18	55468939	55471848	+	57.6	2909	promoter-TSS (NM_005603)	promoter-TSS (NM_005603)	-66	NM_005603	5205	Hs.216623	NM_005603	ENSG00000081923	ATP8B1	ATPIC|BRIC|FIC1|ICP1|PFIC|PFIC1	ATPase phospholipid transporting 8B1	protein-coding	57.61	7.28	7.913461538	3.02E-25
chr18-191	chr18	56273376	56274798	+	19.8	1422	"intron (NM_052947, intron 3 of 12)"	"intron (NM_052947, intron 3 of 12)"	6235	NR_132963	106635543		NR_132963		SNORA108	-	"small nucleolar RNA, H/ACA box 108"	snoRNA	19.84	0.97	20.45360825	5.65E-15
chr18-192	chr18	56978459	56979459	+	16.6	1000	"intron (NM_181654, intron 2 of 2)"	"intron (NM_181654, intron 2 of 2)"	6922	NM_181654	339302	Hs.449884	NM_181654	ENSG00000166569	CPLX4	CPX-IV|CPXIV	complexin 4	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr18-194	chr18	72135328	72136587	+	20.5	1259	Intergenic	Intergenic	-11454	NM_001044369	125704	Hs.371690	NM_001044369	ENSG00000187773	FAM69C	C18orf51	family with sequence similarity 69 member C	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr18-200	chr18	2323403	2324403	+	15.4	1000	Intergenic	Intergenic	247599	NM_022840	64863	Hs.126888	NM_022840	ENSG00000101574	METTL4	HsT661	methyltransferase like 4	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr18-202	chr18	3068454	3069454	+	15.4	1000	"intron (NM_019856, intron 36 of 36)"	L1MD2|LINE|L1	-57009	NM_014646	9663	Hs.132342	NM_014646	ENSG00000101577	LPIN2	-	lipin 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr18-203	chr18	3726458	3727458	+	16.6	1000	"intron (NM_001308390, intron 4 of 10)"	"intron (NM_001308390, intron 4 of 10)"	118400	NM_001242766	9229	Hs.594640	NM_004746	ENSG00000170579	DLGAP1	DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1	DLG associated protein 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr18-204	chr18	3966376	3967376	+	16	1000	"intron (NR_102696, intron 1 of 4)"	L2a|LINE|L2	4523	NR_102696	101410534	Hs.141055	NR_102696	ENSG00000263878	DLGAP1-AS4	-	DLGAP1 antisense RNA 4	ncRNA	16	3.88	4.12371134	7.91E-05
chr18-205	chr18	7134554	7135811	+	16.6	1257	Intergenic	Intergenic	-17369	NM_005559	284217	Hs.270364	NM_005559	ENSG00000101680	LAMA1	LAMA|PTBHS|S-LAM-alpha	laminin subunit alpha 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr18-207	chr18	9802298	9803718	+	18.6	1420	"intron (NM_006868, intron 3 of 6)"	"intron (NM_006868, intron 3 of 6)"	-82715	NM_032243	84203	Hs.98712	NM_032243	ENSG00000168454	TXNDC2	SPTRX|SPTRX1	thioredoxin domain containing 2	protein-coding	18.56	1.46	12.71232877	2.41E-11
chr18-208	chr18	9987155	9988155	+	16	1000	Intergenic	Intergenic	73700	NM_003574	9218	Hs.165195	NM_003574	ENSG00000101558	VAPA	VAP-33|VAP-A|VAP33|hVAP-33	VAMP associated protein A	protein-coding	16	2.91	5.498281787	4.98E-06
chr18-209	chr18	11658973	11659973	+	16.6	1000	Intergenic	Intergenic	-4533	NR_106975	102465690		NR_106975	ENSG00000283492	MIR7153	hsa-mir-7153|mir-7153	microRNA 7153	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr18-212	chr18	19473292	19474292	+	16	1000	Intergenic	Intergenic	-62425	NR_110369	102723167	Hs.658808	NR_110369	ENSG00000265142	MIR133A1HG	MIR1-2HG	MIR133A1 host gene	ncRNA	16	2.91	5.498281787	4.98E-06
chr18-214	chr18	19893600	19894866	+	19.2	1266	Intergenic	Intergenic	103645	NM_172241	64693	Hs.406709	NM_022663	ENSG00000212710	CTAGE1	CT21.1|CT21.2|CTAGE|CTAGE-1|CTAGE-2	cutaneous T-cell lymphoma-associated antigen 1	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr18-216	chr18	21268993	21269993	+	14.7	1000	promoter-TSS (NR_130106)	promoter-TSS (NR_130106)	86	NM_001127717	3909	Hs.436367	NM_000227	ENSG00000053747	LAMA3	BM600|E170|LAMNA|LOCS	laminin subunit alpha 3	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr18-217	chr18	22400116	22401116	+	16.6	1000	Intergenic	Intergenic	94871	NR_134604	105372028	Hs.569901	NR_134604	ENSG00000266573	LOC105372028	-	uncharacterized LOC105372028	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr18-220	chr18	39495976	39496976	+	16	1000	Intergenic	Intergenic	-38687	NM_002647	5289	Hs.464971	NM_002647	ENSG00000078142	PIK3C3	VPS34|Vps34|hVps34	phosphatidylinositol 3-kinase catalytic subunit type 3	protein-coding	16	2.43	6.58436214	7.90E-07
chr18-221	chr18	44780743	44781743	+	16.6	1000	Intergenic	Intergenic	-5689	NM_001278063	652991	Hs.585834	NM_001037802	ENSG00000215474	SKOR2	CH18515|CORL2|FUSSEL18	SKI family transcriptional corepressor 2	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr18-223	chr18	45576509	45577509	+	16	1000	"intron (NM_001318841, intron 3 of 4)"	"intron (NM_001318841, intron 3 of 4)"	86671	NM_001039360	201501	Hs.515388	NM_001039360	ENSG00000184828	ZBTB7C	APM-1|APM1|ZBTB36|ZNF857C	zinc finger and BTB domain containing 7C	protein-coding	16	1.46	10.95890411	3.44E-09
chr18-225	chr18	45938086	45941706	+	41.6	3620	Intergenic	MER31B|LTR|ERV1	-4103	NM_001318841	201501	Hs.515388	NM_001039360	ENSG00000184828	ZBTB7C	APM-1|APM1|ZBTB36|ZNF857C	zinc finger and BTB domain containing 7C	protein-coding	41.61	7.77	5.355212355	1.22E-13
chr18-228	chr18	46272462	46273789	+	21.8	1327	"intron (NM_014772, intron 7 of 11)"	"intron (NM_014772, intron 7 of 11)"	76154	NR_039897	100616366		NR_039897	ENSG00000266276	MIR4743	-	microRNA 4743	ncRNA	21.76	3.88	5.608247423	2.53E-08
chr18-230	chr18	46470796	46472052	+	18.6	1256	"intron (NM_005904, intron 2 of 3)"	"intron (NM_005904, intron 2 of 3)"	-2247	NM_001190823	4092	Hs.465087	NM_005904	ENSG00000101665	SMAD7	CRCS3|MADH7|MADH8	SMAD family member 7	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr18-235	chr18	56971979	56973235	+	19.2	1256	"intron (NM_181654, intron 2 of 2)"	(CAAA)n|Simple_repeat|Simple_repeat	13274	NM_181654	339302	Hs.449884	NM_181654	ENSG00000166569	CPLX4	CPX-IV|CPXIV	complexin 4	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr18-237	chr18	60278491	60279491	+	15.4	1000	Intergenic	Intergenic	88333	NR_126534	54877	Hs.114191	NM_017742	ENSG00000141664	ZCCHC2	C18orf49	zinc finger CCHC-type containing 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr18-238	chr18	61877155	61878155	+	16.6	1000	"intron (NR_033881, intron 2 of 9)"	"intron (NR_033881, intron 2 of 9)"	49635	NR_033983	400654	Hs.434235	NR_033983	ENSG00000266952	LINC01538	-	long intergenic non-protein coding RNA 1538	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr18-239	chr18	74081238	74082238	+	16	1000	"intron (NM_014643, intron 7 of 7)"	"intron (NM_014643, intron 7 of 7)"	-121870	NR_136504	101927989	Hs.665186	NR_136504	ENSG00000265778	LOC101927989	-	uncharacterized LOC101927989	ncRNA	16	2.91	5.498281787	4.98E-06
chr18-242	chr18	77967274	77968274	+	14.7	1000	"intron (NM_032510, intron 1 of 2)"	"intron (NM_032510, intron 1 of 2)"	37623	NM_032510	84552	Hs.654920	NM_032510	ENSG00000178184	PARD6G	PAR-6G|PAR6gamma	par-6 family cell polarity regulator gamma	protein-coding	14.72	0	15.16333034	3.99E-13
chr18-244	chr18	387104	388375	+	17.3	1271	"intron (NM_130386, intron 2 of 9)"	"intron (NM_130386, intron 2 of 9)"	112990	NM_130386	81035	Hs.464422	NM_030781	ENSG00000158270	COLEC12	CLP1|NSR2|SCARA4|SRCL	collectin subfamily member 12	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr18-246	chr18	860576	861576	+	14.7	1000	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-43868	NM_001099733	116	Hs.531719	NM_001117	ENSG00000141433	ADCYAP1	PACAP	adenylate cyclase activating polypeptide 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr18-250	chr18	2364973	2365973	+	15.4	1000	Intergenic	Intergenic	206029	NM_022840	64863	Hs.126888	NM_022840	ENSG00000101574	METTL4	HsT661	methyltransferase like 4	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr18-253	chr18	3661722	3662722	+	15.4	1000	"intron (NM_001308390, intron 4 of 10)"	MLT1H1-int|LTR|ERVL-MaLR	58487	NR_119377	84777	Hs.659053	NM_032691		DLGAP1-AS2	-	DLGAP1 antisense RNA 2	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr18-254	chr18	3766319	3767319	+	15.4	1000	"intron (NM_001003809, intron 2 of 9)"	L1MD1|LINE|L1	78539	NM_001242766	9229	Hs.594640	NM_004746	ENSG00000170579	DLGAP1	DAP-1|DAP-1-ALPHA|DAP-1-BETA|DAP1|DLGAP1A|DLGAP1B|GKAP|SAPAP1	DLG associated protein 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr18-260	chr18	10202563	10203563	+	16	1000	Intergenic	Intergenic	211304	NR_110775	101927350	Hs.572523	NR_110775	ENSG00000260913	LINC01254	-	long intergenic non-protein coding RNA 1254	ncRNA	16	1.46	10.95890411	3.44E-09
chr18-261	chr18	11695809	11696809	+	16	1000	"intron (NM_182978, intron 1 of 11)"	AluY|SINE|Alu	7295	NM_182978	2774	Hs.136295	NM_002071	ENSG00000141404	GNAL	DYT25	G protein subunit alpha L	protein-coding	16	3.4	4.705882353	2.25E-05
chr18-262	chr18	11785355	11786355	+	15.4	1000	"intron (NM_001142339, intron 5 of 12)"	"intron (NM_001142339, intron 5 of 12)"	34384	NM_001142339	2774	Hs.136295	NM_002071	ENSG00000141404	GNAL	DYT25	G protein subunit alpha L	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr18-265	chr18	18906042	18907042	+	16	1000	"intron (NM_001142966, intron 1 of 32)"	"intron (NM_001142966, intron 1 of 32)"	84339	NM_001142966	80000	Hs.149020	NM_024935	ENSG00000141449	GREB1L	C18orf6|KIAA1772	growth regulation by estrogen in breast cancer 1 like	protein-coding	16	2.91	5.498281787	4.98E-06
chr18-266	chr18	18963723	18964723	+	15.4	1000	"exon (NM_001142966, exon 4 of 33)"	"exon (NM_001142966, exon 4 of 33)"	142020	NM_001142966	80000	Hs.149020	NM_024935	ENSG00000141449	GREB1L	C18orf6|KIAA1772	growth regulation by estrogen in breast cancer 1 like	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr18-270	chr18	29307540	29308982	+	19.2	1442	Intergenic	Intergenic	32582	NM_001034172	147407	Hs.567708	NM_001034172	ENSG00000141437	SLC25A52	MCART2	solute carrier family 25 member 52	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr18-271	chr18	29787532	29789229	+	22.4	1697	"intron (NM_001308171, intron 9 of 14)"	"intron (NM_001308171, intron 9 of 14)"	18393	NM_001308171	4225	Hs.194777	NM_005925	ENSG00000141434	MEP1B	-	meprin A subunit beta	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr18-272	chr18	32957192	32958851	+	26.2	1659	promoter-TSS (NM_001322290)	promoter-TSS (NM_001322290)	-720	NM_001322286	252884	Hs.351005	NM_145756	ENSG00000186496	ZNF396	ZSCAN14	zinc finger protein 396	protein-coding	26.24	1.94	13.5257732	4.03E-16
chr18-278	chr18	43912648	43913648	+	14.7	1000	Intergenic	Intergenic	-1039	NM_152470	494470	Hs.501114	NM_152470	ENSG00000141622	RNF165	ARKL2|RNF111L2	ring finger protein 165	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr18-280	chr18	44868908	44869908	+	15.4	1000	Intergenic	MER21C|LTR|ERVL	-37459	NR_039753	100616264		NR_039753	ENSG00000266582	MIR4527	-	microRNA 4527	ncRNA	15.36	0	15.82260557	1.26E-14
chr18-281	chr18	45107772	45108772	+	15.4	1000	Intergenic	Intergenic	201405	NR_039753	100616264		NR_039753	ENSG00000266582	MIR4527	-	microRNA 4527	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr18-282	chr18	45262779	45263779	+	16	1000	Intergenic	MLT1I|LTR|ERVL-MaLR	193691	NM_005901	4087	Hs.12253	NM_005901	ENSG00000175387	SMAD2	JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2	SMAD family member 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr18-286	chr18	45714844	45715844	+	14.1	1000	"intron (NM_001318841, intron 2 of 4)"	"intron (NM_001318841, intron 2 of 4)"	-51664	NM_001039360	201501	Hs.515388	NM_001039360	ENSG00000184828	ZBTB7C	APM-1|APM1|ZBTB36|ZNF857C	zinc finger and BTB domain containing 7C	protein-coding	14.08	0	14.5040551	3.99E-13
chr18-293	chr18	46474521	46476965	+	44.2	2444	promoter-TSS (NM_001190822)	promoter-TSS (NM_001190822)	-40	NM_001190822	4092	Hs.465087	NM_005904	ENSG00000101665	SMAD7	CRCS3|MADH7|MADH8	SMAD family member 7	protein-coding	44.17	7.28	6.067307692	6.36E-16
chr18-294	chr18	46514220	46515220	+	15.4	1000	Intergenic	AluSx1|SINE|Alu	-37639	NM_001190821	4092	Hs.465087	NM_005904	ENSG00000101665	SMAD7	CRCS3|MADH7|MADH8	SMAD family member 7	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr18-295	chr18	46533327	46534327	+	15.4	1000	Intergenic	MIRb|SINE|MIR	42311	NR_039898	100616420		NR_039898	ENSG00000263849	MIR4744	-	microRNA 4744	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr18-299	chr18	47539509	47540509	+	15.4	1000	"intron (NM_001080467, intron 4 of 39)"	"intron (NM_001080467, intron 4 of 39)"	112924	NR_036204	100422865		NR_036204	ENSG00000283343	MIR4320	-	microRNA 4320	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr18-300	chr18	48757452	48758452	+	14.7	1000	Intergenic	HERVL-int|LTR|ERVL	-33901	NM_016626	51320	Hs.465144	NM_016626	ENSG00000176624	MEX3C	BM-013|MEX-3C|RKHD2|RNF194	mex-3 RNA binding family member C	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr18-309	chr18	61513062	61514600	+	23.7	1538	Intergenic	Intergenic	-41108	NM_002575	5055	Hs.594481	NM_002575	ENSG00000197632	SERPINB2	HsT1201|PAI|PAI-2|PAI2|PLANH2	serpin family B member 2	protein-coding	23.68	2.43	9.744855967	2.61E-12
chr18-313	chr18	71938275	71940194	+	29.4	1919	"intron (NM_148923, intron 1 of 4)"	LTR10E|LTR|ERV1	20017	NM_001914	1528	Hs.465413	NM_001914	ENSG00000166347	CYB5A	CYB5|MCB5	cytochrome b5 type A	protein-coding	29.44	4.85	6.070103093	2.13E-11
chr18-315	chr18	72048883	72050333	+	21.1	1450	Intergenic	Intergenic	-27075	NR_131977	101927606	Hs.623809	NR_131977	ENSG00000259779	LINC01922	-	long intergenic non-protein coding RNA 1922	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr18-319	chr18	76386903	76388789	+	28.2	1886	Intergenic	Intergenic	-352429	NM_171999	27164	Hs.700557	NM_171999	ENSG00000256463	SALL3	ZNF796	spalt like transcription factor 3	protein-coding	28.16	5.82	4.838487973	3.50E-09
chr18-321	chr18	76432986	76433986	+	15.4	1000	Intergenic	MLT1B|LTR|ERVL-MaLR	-306789	NM_171999	27164	Hs.700557	NM_171999	ENSG00000256463	SALL3	ZNF796	spalt like transcription factor 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr18-322	chr18	76483436	76484436	+	15.4	1000	Intergenic	MER4B|LTR|ERV1	-256339	NM_171999	27164	Hs.700557	NM_171999	ENSG00000256463	SALL3	ZNF796	spalt like transcription factor 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr18-325	chr18	1248020	1249270	+	18.6	1250	Intergenic	Intergenic	110985	NR_023927	56651	Hs.541165	NM_031416		LINC00470	C18orf2	long intergenic non-protein coding RNA 470	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr18-326	chr18	3119808	3120808	+	15.4	1000	"intron (NM_019856, intron 18 of 36)"	MLT1E1|LTR|ERVL-MaLR	99798	NM_019856	8736	Hs.464469	NM_003803	ENSG00000101605	MYOM1	SKELEMIN	myomesin 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr18-327	chr18	3449906	3453185	+	46.7	3279	"5' UTR (NM_173210, exon 1 of 3)"	"5' UTR (NM_173210, exon 1 of 3)"	142	NM_173210	7050	Hs.373550	NM_003244	ENSG00000177426	TGIF1	HPE4|TGIF	TGFB induced factor homeobox 1	protein-coding	46.73	10.68	4.375468165	1.21E-12
chr18-329	chr18	5960976	5961976	+	15.4	1000	"intron (NM_001330559, intron 17 of 18)"	"intron (NM_001330559, intron 17 of 18)"	-69373	NM_001080209	645369	Hs.346566	NM_001080209	ENSG00000206432	TMEM200C	TTMA	transmembrane protein 200C	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr18-330	chr18	6279770	6280770	+	15.4	1000	"intron (NM_001330559, intron 4 of 18)"	"intron (NM_001330559, intron 4 of 18)"	23527	NR_110765	101927150		NR_110765		L3MBTL4-AS1	-	L3MBTL4 antisense RNA 1	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr18-331	chr18	6966635	6967635	+	14.7	1000	"intron (NM_005559, intron 48 of 62)"	"intron (NM_005559, intron 48 of 62)"	12459	NR_126040	101927188	Hs.680444	NR_126040	ENSG00000265069	LOC101927188	-	uncharacterized LOC101927188	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr18-335	chr18	8853774	8854774	+	12.8	1000	Intergenic	Intergenic	136905	NM_015210	23255	Hs.707920	NM_015210	ENSG00000168502	MTCL1	CCDC165|KIAA0802|SOGA2	microtubule crosslinking factor 1	protein-coding	12.8	2.43	5.267489712	2.99E-05
chr18-338	chr18	10131383	10132698	+	20.5	1315	Intergenic	CpG	218085	NM_003574	9218	Hs.165195	NM_003574	ENSG00000101558	VAPA	VAP-33|VAP-A|VAP33|hVAP-33	VAMP associated protein A	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr18-339	chr18	10190079	10191079	+	14.1	1000	Intergenic	MIRb|SINE|MIR	223788	NR_110775	101927350	Hs.572523	NR_110775	ENSG00000260913	LINC01254	-	long intergenic non-protein coding RNA 1254	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr18-341	chr18	10677445	10678445	+	14.7	1000	"intron (NM_022068, intron 48 of 51)"	"intron (NM_022068, intron 48 of 51)"	16015	NR_110777	101927410	Hs.436902	NR_110777	ENSG00000260779	LOC101927410	-	uncharacterized LOC101927410	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr18-342	chr18	10698737	10699737	+	14.7	1000	"intron (NM_022068, intron 39 of 51)"	"intron (NM_022068, intron 39 of 51)"	37307	NR_110777	101927410	Hs.436902	NR_110777	ENSG00000260779	LOC101927410	-	uncharacterized LOC101927410	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr18-347	chr18	11663677	11664677	+	14.7	1000	Intergenic	Intergenic	-9237	NR_106975	102465690		NR_106975	ENSG00000283492	MIR7153	hsa-mir-7153|mir-7153	microRNA 7153	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr18-348	chr18	11669638	11670638	+	14.7	1000	Intergenic	Intergenic	-15198	NR_106975	102465690		NR_106975	ENSG00000283492	MIR7153	hsa-mir-7153|mir-7153	microRNA 7153	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr18-350	chr18	12151453	12152453	+	13.4	1000	Intergenic	L1PA14|LINE|L1	-48825	NR_049896	497259	Hs.451609	NR_049896		C18orf61	-	uncharacterized LOC497259	ncRNA	13.44	0.49	27.42857143	1.16E-11
chr18-352	chr18	19769205	19773615	+	55	4410	"intron (NM_005257, intron 6 of 6)"	"intron (NM_005257, intron 6 of 6)"	22012	NM_005257	2627	Hs.514746	NM_005257	ENSG00000141448	GATA6	-	GATA binding protein 6	protein-coding	55.05	11.16	4.932795699	9.34E-17
chr18-354	chr18	20011208	20012208	+	14.7	1000	Intergenic	Intergenic	-13830	NM_172241	64693	Hs.406709	NM_022663	ENSG00000212710	CTAGE1	CT21.1|CT21.2|CTAGE|CTAGE-1|CTAGE-2	cutaneous T-cell lymphoma-associated antigen 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr18-355	chr18	20714592	20717113	+	37.8	2521	"exon (NM_001100619, exon 1 of 10)"	"exon (NM_001100619, exon 1 of 10)"	125	NM_001100619	91768	Hs.11108	NM_138375	ENSG00000134508	CABLES1	CABL1|CABLES|HsT2563|IK3-1	Cdk5 and Abl enzyme substrate 1	protein-coding	37.76	2.91	12.97594502	2.83E-22
chr18-358	chr18	21237537	21241804	+	56.3	4267	"intron (NM_173505, intron 1 of 9)"	AluSc|SINE|Alu	3179	NM_001308238	147463	Hs.355689	NM_173505	ENSG00000154065	ANKRD29	-	ankyrin repeat domain 29	protein-coding	56.33	12.62	4.463549921	1.34E-15
chr18-362	chr18	24765154	24766470	+	20.5	1316	promoter-TSS (NM_001256316)	promoter-TSS (NM_001256316)	-510	NM_031422	83539	Hs.44584	NM_031422	ENSG00000154080	CHST9	GALNAC4ST-2|GalNAc4ST2	carbohydrate sulfotransferase 9	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr18-366	chr18	32317454	32318454	+	13.4	1000	"intron (NM_001198941, intron 1 of 14)"	L2c|LINE|L2	-17986	NM_001390	1837	Hs.643454	NM_001390	ENSG00000134769	DTNA	D18S892E|DRP3|DTN|DTN-A|LVNC1	dystrobrevin alpha	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr18-367	chr18	32463511	32464789	+	16.6	1278	"intron (NM_001198938, intron 19 of 19)"	"intron (NM_001198938, intron 19 of 19)"	65848	NM_032980	1837	Hs.643454	NM_001390	ENSG00000134769	DTNA	D18S892E|DRP3|DTN|DTN-A|LVNC1	dystrobrevin alpha	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr18-371	chr18	34930257	34931257	+	15.4	1000	"intron (NM_001025087, intron 2 of 12)"	"intron (NM_001025087, intron 2 of 12)"	76334	NR_134588	105372068	Hs.569903	NR_134588	ENSG00000267202	LOC105372068	-	uncharacterized LOC105372068	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr18-373	chr18	35148853	35149853	+	14.7	1000	Intergenic	Intergenic	-3353	NM_020180	56853	Hs.435976	NM_020180	ENSG00000101489	CELF4	BRUNOL4|CELF-4	"CUGBP, Elav-like family member 4"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr18-375	chr18	39399774	39400774	+	14.1	1000	Intergenic	Intergenic	-134889	NM_002647	5289	Hs.464971	NM_002647	ENSG00000078142	PIK3C3	VPS34|Vps34|hVps34	phosphatidylinositol 3-kinase catalytic subunit type 3	protein-coding	14.08	0	14.5040551	3.99E-13
chr18-376	chr18	39483226	39484226	+	15.4	1000	Intergenic	MLT1A0-int|LTR|ERVL-MaLR	-51437	NM_002647	5289	Hs.464971	NM_002647	ENSG00000078142	PIK3C3	VPS34|Vps34|hVps34	phosphatidylinositol 3-kinase catalytic subunit type 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr18-380	chr18	44109300	44110300	+	14.1	1000	"intron (NM_144612, intron 28 of 39)"	"intron (NM_144612, intron 28 of 39)"	-10751	NM_001145473	125336	Hs.345877	NM_144612	ENSG00000167210	LOXHD1	DFNB77|LH2D1	lipoxygenase homology domains 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr18-382	chr18	44299436	44300436	+	15.4	1000	"intron (NM_013305, intron 1 of 6)"	AluSz|SINE|Alu	37196	NM_013305	29906	Hs.465025	NM_013305	ENSG00000101638	ST8SIA5	SIAT8-E|SIAT8E|ST8SiaV	"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5"	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr18-386	chr18	45245953	45246953	+	14.7	1000	Intergenic	Intergenic	210517	NM_005901	4087	Hs.12253	NM_005901	ENSG00000175387	SMAD2	JV18|JV18-1|MADH2|MADR2|hMAD-2|hSMAD2	SMAD family member 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr18-391	chr18	45949034	45950034	+	15.4	1000	Intergenic	Intergenic	-13741	NM_001318841	201501	Hs.515388	NM_001039360	ENSG00000184828	ZBTB7C	APM-1|APM1|ZBTB36|ZNF857C	zinc finger and BTB domain containing 7C	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr18-392	chr18	45967317	45968850	+	21.8	1533	Intergenic	Intergenic	-32290	NM_001318841	201501	Hs.515388	NM_001039360	ENSG00000184828	ZBTB7C	APM-1|APM1|ZBTB36|ZNF857C	zinc finger and BTB domain containing 7C	protein-coding	21.76	2.43	8.95473251	2.49E-11
chr18-393	chr18	46007741	46008741	+	13.4	1000	Intergenic	L1MA5|LINE|L1	-57186	NM_014772	9811	Hs.145230	NM_014772	ENSG00000134030	CTIF	Gm672|KIAA0427	cap binding complex dependent translation initiation factor	protein-coding	13.44	0	13.84477987	1.16E-11
chr18-394	chr18	46074140	46075434	+	21.1	1294	"intron (NM_001142397, intron 2 of 12)"	"intron (NM_001142397, intron 2 of 12)"	9360	NM_001142397	9811	Hs.145230	NM_014772	ENSG00000134030	CTIF	Gm672|KIAA0427	cap binding complex dependent translation initiation factor	protein-coding	21.12	2.43	8.691358025	2.25E-10
chr18-395	chr18	46308424	46309764	+	21.8	1340	"intron (NM_014772, intron 9 of 11)"	"intron (NM_014772, intron 9 of 11)"	112123	NR_039897	100616366		NR_039897	ENSG00000266276	MIR4743	-	microRNA 4743	ncRNA	21.76	1.94	11.21649485	8.00E-13
chr18-398	chr18	47088856	47089856	+	14.7	1000	"intron (NM_006033, intron 1 of 9)"	CT-rich|Low_complexity|Low_complexity	955	NM_001308006	9388	Hs.465102	NM_006033	ENSG00000101670	LIPG	EDL|EL|PRO719	"lipase G, endothelial type"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr18-399	chr18	47252215	47253215	+	14.1	1000	Intergenic	Intergenic	87536	NM_006111	10449	Hs.200136	NM_006111	ENSG00000167315	ACAA2	DSAEC	acetyl-CoA acyltransferase 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr18-401	chr18	47693319	47694319	+	14.1	1000	"intron (NM_001080467, intron 1 of 39)"	"intron (NM_001080467, intron 1 of 39)"	27632	NM_001080467	4645	Hs.720076	NM_001080467	ENSG00000167306	MYO5B	-	myosin VB	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr18-402	chr18	48161107	48162107	+	14.7	1000	"intron (NM_001292039, intron 1 of 4)"	L2b|LINE|L2	75123	NM_001292039	5596	Hs.433728	NM_002747	ENSG00000141639	MAPK4	ERK-4|ERK4|PRKM4|p63-MAPK|p63MAPK	mitogen-activated protein kinase 4	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr18-405	chr18	48286188	48288424	+	33.3	2236	Intergenic	MLT1A0|LTR|ERVL-MaLR	59128	NM_001127176	83876	Hs.30495	NM_031939	ENSG00000134042	MRO	B29|C18orf3	maestro	protein-coding	33.28	5.82	5.718213058	4.04E-12
chr18-408	chr18	55098995	55100718	+	24.3	1723	Intergenic	Intergenic	-3061	NM_004852	9480	Hs.194725	NM_004852	ENSG00000119547	ONECUT2	OC-2|OC2	one cut homeobox 2	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr18-413	chr18	56456643	56457643	+	14.1	1000	Intergenic	Intergenic	-72689	NM_001318726	55205	Hs.529023	NM_018181	ENSG00000074657	ZNF532	-	zinc finger protein 532	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr18-415	chr18	56498082	56499082	+	15.4	1000	Intergenic	MIRb|SINE|MIR	-31250	NM_001318726	55205	Hs.529023	NM_018181	ENSG00000074657	ZNF532	-	zinc finger protein 532	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr18-416	chr18	56569493	56570493	+	14.7	1000	"intron (NM_001318726, intron 2 of 9)"	AluSp|SINE|Alu	38670	NM_001318728	55205	Hs.529023	NM_018181	ENSG00000074657	ZNF532	-	zinc finger protein 532	protein-coding	14.72	0	15.16333034	3.99E-13
chr18-417	chr18	56949557	56950557	+	14.7	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	-9432	NM_013435	30062	Hs.278957	NM_013435	ENSG00000134438	RAX	MCOP3|RX	retina and anterior neural fold homeobox	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr18-418	chr18	57046744	57047744	+	14.7	1000	Intergenic	L1MB5|LINE|L1	-20736	NM_005570	3998	Hs.465295	NM_005570	ENSG00000074695	LMAN1	ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58	"lectin, mannose binding 1"	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr18-419	chr18	57183656	57184656	+	14.7	1000	"intron (NM_133459, intron 2 of 10)"	"intron (NM_133459, intron 2 of 10)"	-157648	NM_005570	3998	Hs.465295	NM_005570	ENSG00000074695	LMAN1	ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58	"lectin, mannose binding 1"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr18-420	chr18	57199594	57200594	+	15.4	1000	"intron (NM_133459, intron 2 of 10)"	"intron (NM_133459, intron 2 of 10)"	164550	NM_133459	147372	Hs.34333	NM_133459	ENSG00000183287	CCBE1	HKLLS1	collagen and calcium binding EGF domains 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr18-421	chr18	57263747	57265271	+	23.7	1524	"intron (NM_133459, intron 2 of 10)"	MIR|SINE|MIR	100135	NM_133459	147372	Hs.34333	NM_133459	ENSG00000183287	CCBE1	HKLLS1	collagen and calcium binding EGF domains 1	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr18-422	chr18	58984050	58985050	+	14.1	1000	Intergenic	Intergenic	-16265	NM_031891	28316	Hs.671510	NM_031891	ENSG00000101542	CDH20	CDH7L3|Cdh7	cadherin 20	protein-coding	14.08	0	14.5040551	3.99E-13
chr18-423	chr18	59677779	59678779	+	14.7	1000	Intergenic	L2a|LINE|L2	-117975	NM_173557	220441	Hs.165062	NM_173557	ENSG00000176641	RNF152	-	ring finger protein 152	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr18-424	chr18	60023856	60024856	+	15.4	1000	"intron (NM_001278268, intron 4 of 9)"	"intron (NM_001278268, intron 4 of 9)"	31836	NM_001270949	8792	Hs.204044	NM_003839	ENSG00000141655	TNFRSF11A	CD265|FEO|LOH18CR1|ODFR|OFE|OPTB7|OSTS|PDB2|RANK|TRANCER	TNF receptor superfamily member 11a	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr18-426	chr18	61255455	61256713	+	20.5	1258	"intron (NM_012397, intron 2 of 7)"	"intron (NM_012397, intron 2 of 7)"	1550	NM_012397	5275	Hs.241407	NM_012397	ENSG00000197641	SERPINB13	HSHUR7SEQ|HUR7|PI13|headpin	serpin family B member 13	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr18-427	chr18	61583236	61584236	+	14.1	1000	"intron (NM_005024, intron 2 of 7)"	"intron (NM_005024, intron 2 of 7)"	8512	NM_005024	5273	Hs.158339	NM_005024	ENSG00000242550	SERPINB10	PI-10|PI10	serpin family B member 10	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr18-431	chr18	72036087	72037087	+	15.4	1000	Intergenic	Intergenic	-40096	NR_131977	101927606	Hs.623809	NR_131977	ENSG00000259779	LINC01922	-	long intergenic non-protein coding RNA 1922	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr18-434	chr18	72820708	72821708	+	15.4	1000	Intergenic	Intergenic	96260	NM_001306093	284273	Hs.465433	NM_175907	ENSG00000180011	ZADH2	PRG-3	zinc binding alcohol dehydrogenase domain containing 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr18-437	chr18	74182735	74183735	+	15.4	1000	"intron (NM_014643, intron 1 of 7)"	"intron (NM_014643, intron 1 of 7)"	-20373	NR_136504	101927989	Hs.665186	NR_136504	ENSG00000265778	LOC101927989	-	uncharacterized LOC101927989	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr18-438	chr18	74202183	74203183	+	14.1	1000	promoter-TSS (NR_136504)	promoter-TSS (NR_136504)	-925	NR_136504	101927989	Hs.665186	NR_136504	ENSG00000265778	LOC101927989	-	uncharacterized LOC101927989	ncRNA	14.08	0	14.5040551	3.99E-13
chr18-44	chr18	46501383	46502909	+	26.9	1526	Intergenic	CpG	-25065	NM_001190821	4092	Hs.465087	NM_005904	ENSG00000101665	SMAD7	CRCS3|MADH7|MADH8	SMAD family member 7	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr18-440	chr18	74255045	74256045	+	14.1	1000	"intron (NR_015417, intron 2 of 2)"	"intron (NR_015417, intron 2 of 2)"	14933	NR_015417	284276	Hs.390287	NR_015417	ENSG00000263812	LINC00908	-	long intergenic non-protein coding RNA 908	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr18-441	chr18	76116570	76117570	+	14.7	1000	Intergenic	Intergenic	-411387	NR_104127	101927715	Hs.385670	NR_104127		LINC01029	-	long intergenic non-protein coding RNA 1029	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr18-442	chr18	76620026	76621026	+	14.7	1000	Intergenic	Intergenic	-119749	NM_171999	27164	Hs.700557	NM_171999	ENSG00000256463	SALL3	ZNF796	spalt like transcription factor 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr18-443	chr18	76651276	76652781	+	21.8	1505	Intergenic	L1ME3A|LINE|L1	-88247	NM_171999	27164	Hs.700557	NM_171999	ENSG00000256463	SALL3	ZNF796	spalt like transcription factor 3	protein-coding	21.76	4.37	4.979405034	1.32E-07
chr18-444	chr18	77414141	77415141	+	14.1	1000	"intron (NR_136643, intron 2 of 4)"	L1ME3F|LINE|L1	25104	NR_136643	284241		NR_136643	ENSG00000178412	LOC284241	-	uncharacterized LOC284241	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr18-45	chr18	47045187	47046187	+	20.5	1000	Intergenic	Intergenic	-26752	NM_001199345	6139	Hs.293653	NM_000985	ENSG00000215472	RPL17	L17|PD-1|RPL23	ribosomal protein L17	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr18-46	chr18	56080427	56081793	+	26.2	1366	Intergenic	Intergenic	-37196	NR_029667	406906		NR_029667	ENSG00000267391	MIR122	MIR122A|MIRN122|MIRN122A|hsa-mir-122|miRNA122|miRNA122A|mir-122	microRNA 122	ncRNA	26.24	5.82	4.508591065	7.99E-08
chr18-48	chr18	44253993	44254993	+	20.5	1000	Intergenic	Intergenic	-17497	NM_144612	125336	Hs.345877	NM_144612	ENSG00000167210	LOXHD1	DFNB77|LH2D1	lipoxygenase homology domains 1	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr18-51	chr18	56511414	56512414	+	21.1	1000	Intergenic	AluSz|SINE|Alu	-17918	NM_001318726	55205	Hs.529023	NM_018181	ENSG00000074657	ZNF532	-	zinc finger protein 532	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr18-52	chr18	8703285	8704537	+	21.8	1252	"intron (NR_120598, intron 1 of 1)"	"intron (NR_120598, intron 1 of 1)"	3708	NR_120598	100287082	Hs.439434	NR_120598	ENSG00000265962	GACAT2	MTCL1-AS1|MTCL1AS1	gastric cancer associated transcript 2 (non-protein coding)	ncRNA	21.76	3.88	5.608247423	2.53E-08
chr18-54	chr18	45696735	45698018	+	21.8	1283	"intron (NM_001318841, intron 3 of 4)"	"intron (NM_001318841, intron 3 of 4)"	-33696	NM_001039360	201501	Hs.515388	NM_001039360	ENSG00000184828	ZBTB7C	APM-1|APM1|ZBTB36|ZNF857C	zinc finger and BTB domain containing 7C	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr18-56	chr18	46383170	46384170	+	19.2	1000	"intron (NM_014772, intron 10 of 11)"	"intron (NM_014772, intron 10 of 11)"	85507	NM_001190823	4092	Hs.465087	NM_005904	ENSG00000101665	SMAD7	CRCS3|MADH7|MADH8	SMAD family member 7	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr18-58	chr18	59558547	59562617	+	63.4	4070	promoter-TSS (NM_173557)	promoter-TSS (NM_173557)	-278	NM_173557	220441	Hs.165062	NM_173557	ENSG00000176641	RNF152	-	ring finger protein 152	protein-coding	63.37	10.19	6.218842002	9.63E-23
chr18-59	chr18	77155863	77156863	+	19.8	1000	"intron (NM_172388, intron 1 of 8)"	CpG-11956	591	NM_001278670	4772	Hs.534074	NM_006162	ENSG00000131196	NFATC1	NF-ATC|NF-ATc1.2|NFAT2|NFATc	nuclear factor of activated T-cells 1	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr18-61	chr18	8561256	8562256	+	18.6	1000	Intergenic	Intergenic	-47687	NM_001025300	201475	Hs.270074	NM_001025300	ENSG00000206418	RAB12	-	"RAB12, member RAS oncogene family"	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr18-63	chr18	21198718	21200485	+	39.7	1767	"intron (NM_173505, intron 6 of 9)"	CpG-11685	-33020	NM_000271	4864	Hs.464779	NM_000271	ENSG00000141458	NPC1	NPC	NPC intracellular cholesterol transporter 1	protein-coding	39.69	5.82	6.819587629	3.74E-16
chr18-64	chr18	35041682	35043217	+	23.7	1535	"intron (NM_001025087, intron 2 of 12)"	"intron (NM_001025087, intron 2 of 12)"	4018	NR_132967	106635546		NR_132967		SNORA111	-	"small nucleolar RNA, H/ACA box 111"	snoRNA	23.68	3.88	6.103092784	4.22E-09
chr18-66	chr18	45661861	45663129	+	23	1268	"intron (NM_001318841, intron 3 of 4)"	CpG	1185	NM_001039360	201501	Hs.515388	NM_001039360	ENSG00000184828	ZBTB7C	APM-1|APM1|ZBTB36|ZNF857C	zinc finger and BTB domain containing 7C	protein-coding	23.04	5.34	4.314606742	4.49E-07
chr18-69	chr18	61100244	61101244	+	19.2	1000	Intergenic	Intergenic	-10992	NM_004869	9525	Hs.126550	NM_004869	ENSG00000119541	VPS4B	MIG1|SKD1|SKD1B|VPS4-2	vacuolar protein sorting 4 homolog B	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr18-70	chr18	383484	384771	+	21.8	1287	"intron (NM_130386, intron 2 of 9)"	MER5B|DNA|hAT-Charlie	-116068	NM_005131	9984	Hs.712543	NM_005131	ENSG00000079134	THOC1	HPR1|P84|P84N5	THO complex 1	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr18-72	chr18	958315	959315	+	19.2	1000	Intergenic	Intergenic	53618	NM_001117	116	Hs.531719	NM_001117	ENSG00000141433	ADCYAP1	PACAP	adenylate cyclase activating polypeptide 1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr18-75	chr18	19545942	19546942	+	19.2	1000	Intergenic	Intergenic	-135075	NR_110369	102723167	Hs.658808	NR_110369	ENSG00000265142	MIR133A1HG	MIR1-2HG	MIR133A1 host gene	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr18-77	chr18	35118324	35119324	+	18.6	1000	"intron (NM_001025087, intron 1 of 12)"	"intron (NM_001025087, intron 1 of 12)"	27176	NM_001025089	56853	Hs.435976	NM_020180	ENSG00000101489	CELF4	BRUNOL4|CELF-4	"CUGBP, Elav-like family member 4"	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr18-78	chr18	45923144	45924397	+	19.8	1253	"intron (NM_001318841, intron 1 of 4)"	"intron (NM_001318841, intron 1 of 4)"	12023	NM_001318841	201501	Hs.515388	NM_001039360	ENSG00000184828	ZBTB7C	APM-1|APM1|ZBTB36|ZNF857C	zinc finger and BTB domain containing 7C	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr18-82	chr18	54781352	54782352	+	18.6	1000	Intergenic	Intergenic	-32441	NM_001257964	284257	Hs.127882	NM_001257964	ENSG00000228075	BOD1L2	BOD1P|FAM44C	biorientation of chromosomes in cell division 1 like 2	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr18-84	chr18	57082496	57083496	+	18.6	1000	Intergenic	Intergenic	-56488	NM_005570	3998	Hs.465295	NM_005570	ENSG00000074695	LMAN1	ERGIC-53|ERGIC53|F5F8D|FMFD1|MCFD1|MR60|gp58	"lectin, mannose binding 1"	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr18-86	chr18	73264382	73265382	+	17.9	1000	Intergenic	Intergenic	-125224	NM_001037331	284274	Hs.666744	NM_001037331	ENSG00000206026	SMIM21	C18orf62	small integral membrane protein 21	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr18-87	chr18	74444337	74445337	+	17.9	1000	Intergenic	HUERS-P1-int|LTR|ERV1	42851	NR_122073	400661	Hs.514963	NR_122073	ENSG00000276397	LINC01879	-	long intergenic non-protein coding RNA 1879	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr18-88	chr18	74715869	74717139	+	21.1	1270	"intron (NM_001025101, intron 4 of 8)"	"intron (NM_001025101, intron 4 of 8)"	12551	NM_002385	4155	Hs.551713	NM_002385	ENSG00000197971	MBP	-	myelin basic protein	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr18-90	chr18	8606926	8608633	+	28.8	1707	Intergenic	MIRc|SINE|MIR	-1664	NM_001025300	201475	Hs.270074	NM_001025300	ENSG00000206418	RAB12	-	"RAB12, member RAS oncogene family"	protein-coding	28.8	6.31	4.564183835	1.42E-08
chr18-91	chr18	11763506	11764942	+	20.5	1436	"intron (NM_001142339, intron 5 of 12)"	AluSx1|SINE|Alu	12753	NM_001142339	2774	Hs.136295	NM_002071	ENSG00000141404	GNAL	DYT25	G protein subunit alpha L	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr18-92	chr18	13800695	13801695	+	17.9	1000	Intergenic	CpG	-24348	NM_005913	4161	Hs.248145	NM_005913	ENSG00000176136	MC5R	MC2	melanocortin 5 receptor	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr18-95	chr18	43354714	43357047	+	41.6	2333	Intergenic	Intergenic	48962	NM_001146037	6563	Hs.101307	NM_015865	ENSG00000141469	SLC14A1	HUT11|HsT1341|JK|RACH1|RACH2|UT-B1|UT1|UTE	solute carrier family 14 member 1 (Kidd blood group)	protein-coding	41.61	3.88	10.7242268	5.31E-22
chr18-96	chr18	44170068	44171068	+	17.9	1000	"intron (NM_144612, intron 12 of 39)"	MADE1|DNA|TcMar-Mariner	-31298	NM_001145472	125336	Hs.345877	NM_144612	ENSG00000167210	LOXHD1	DFNB77|LH2D1	lipoxygenase homology domains 1	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr18-97	chr18	45009804	45010804	+	17.3	1000	Intergenic	MIRc|SINE|MIR	103437	NR_039753	100616264		NR_039753	ENSG00000266582	MIR4527	-	microRNA 4527	ncRNA	17.28	1.46	11.83561644	2.99E-10
chr19-100	chr19	2644682	2645682	+	22.4	1000	"intron (NM_052847, intron 2 of 4)"	AluJo|SINE|Alu	14469	NR_107004	102465838		NR_107004	ENSG00000277904	MIR7850	hsa-mir-7850	microRNA 7850	ncRNA	22.4	5.34	4.194756554	1.97E-06
chr19-1003	chr19	30362631	30364208	+	21.8	1577	Intergenic	CpG	-51132	NM_001252641	8725	Hs.466391	NM_003796	ENSG00000105176	URI1	C19orf2|NNX3|PPP1R19|RMP|URI	"URI1, prefoldin like chaperone"	protein-coding	21.76	3.4	6.4	3.73E-09
chr19-1005	chr19	30700101	30701101	+	15.4	1000	Intergenic	Intergenic	-162699	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr19-1009	chr19	30875808	30876808	+	15.4	1000	"intron (NM_014717, intron 1 of 4)"	"intron (NM_014717, intron 1 of 4)"	13008	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr19-1011	chr19	30942131	30943131	+	14.7	1000	"intron (NM_014717, intron 2 of 4)"	"intron (NM_014717, intron 2 of 4)"	79331	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr19-1012	chr19	31039449	31040449	+	14.7	1000	"exon (NM_014717, exon 4 of 5)"	"exon (NM_014717, exon 4 of 5)"	176649	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr19-1013	chr19	31121606	31122606	+	15.4	1000	Intergenic	Intergenic	258806	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr19-1016	chr19	31233495	31235037	+	24.3	1542	Intergenic	Intergenic	370966	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	24.32	2.91	8.357388316	5.77E-12
chr19-1017	chr19	31563788	31564788	+	15.4	1000	Intergenic	Intergenic	276143	NR_138034	57616	Hs.278436	NM_020856	ENSG00000121297	TSHZ3	TSH3|ZNF537	teashirt zinc finger homeobox 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr19-1021	chr19	31958034	31959034	+	14.1	1000	Intergenic	L1MC|LINE|L1	-118103	NM_020856	57616	Hs.278436	NM_020856	ENSG00000121297	TSHZ3	TSH3|ZNF537	teashirt zinc finger homeobox 3	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr19-1022	chr19	32025526	32026526	+	14.7	1000	Intergenic	Intergenic	-53069	NM_001278577	100507527	Hs.432564	NM_001205273		THEG5	-	testis highly expressed protein 5	protein-coding	14.72	0	15.16333034	3.99E-13
chr19-1026	chr19	32527730	32528730	+	14.1	1000	"intron (NR_110675, intron 2 of 4)"	"intron (NR_110675, intron 2 of 4)"	11462	NR_110675	100996665	Hs.443685	NR_110673	ENSG00000267779	LINC01533	CTC-360P9.3	long intergenic non-protein coding RNA 1533	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr19-1028	chr19	32558073	32559073	+	14.7	1000	Intergenic	Intergenic	38249	NR_110694	101927411	Hs.515337	NR_110694	ENSG00000267204	LINC01782	-	long intergenic non-protein coding RNA 1782	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr19-1029	chr19	32744553	32745553	+	15.4	1000	Intergenic	Intergenic	-91461	NM_014910	22847	Hs.205392	NM_014910	ENSG00000168813	ZNF507	-	zinc finger protein 507	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr19-1030	chr19	33221908	33222908	+	14.7	1000	"intron (NM_001110822, intron 1 of 12)"	"intron (NM_001110822, intron 1 of 12)"	11729	NM_001110822	91646	Hs.646351	NM_001015890	ENSG00000173809	TDRD12	ECAT8	tudor domain containing 12	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr19-1032	chr19	33318276	33319276	+	15.4	1000	Intergenic	Intergenic	41907	NM_001243036	11136	Hs.743345	NM_014270	ENSG00000021488	SLC7A9	BAT1|CSNU3	solute carrier family 7 member 9	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr19-1036	chr19	34340344	34341344	+	15.4	1000	Intergenic	L1M2|LINE|L1	53093	NM_024076	79047	Hs.221873	NM_024076	ENSG00000153885	KCTD15	-	potassium channel tetramerization domain containing 15	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr19-1037	chr19	34402265	34403265	+	14.7	1000	Intergenic	Intergenic	115014	NM_024076	79047	Hs.221873	NM_024076	ENSG00000153885	KCTD15	-	potassium channel tetramerization domain containing 15	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr19-1045	chr19	35361670	35362670	+	14.7	1000	Intergenic	L1MD3|LINE|L1	27677	NR_046222	100652909	Hs.374015	NR_046222	ENSG00000271649	LINC00904	-	long intergenic non-protein coding RNA 904	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr19-1049	chr19	35607410	35611665	+	64	4255	"intron (NM_001136007, intron 3 of 10)"	"intron (NM_001136007, intron 3 of 10)"	2805	NM_021910	5349	Hs.301350	NM_005971	ENSG00000089356	FXYD3	MAT8|PLML	FXYD domain containing ion transport regulator 3	protein-coding	64.01	13.11	4.882532418	4.75E-19
chr19-1053	chr19	35738275	35740772	+	41.6	2497	promoter-TSS (NM_001260490)	promoter-TSS (NM_001260490)	-36	NM_205835	51599	Hs.466507	NM_015925	ENSG00000105699	LSR	ILDR3|LISCH7	lipolysis stimulated lipoprotein receptor	protein-coding	41.61	5.82	7.149484536	5.30E-17
chr19-1056	chr19	35888850	35889850	+	14.7	1000	Intergenic	L2a|LINE|L2	-7159	NR_040046	100128682	Hs.570008	NR_040046	ENSG00000205786	LINC01531	-	long intergenic non-protein coding RNA 1531	ncRNA	14.72	0	15.16333034	3.99E-13
chr19-1059	chr19	35998794	36001801	+	53.1	3007	"intron (NM_001126056, intron 6 of 17)"	"intron (NM_001126056, intron 6 of 17)"	1094	NM_001126059	93099	Hs.417795	NM_033317	ENSG00000161249	DMKN	UNQ729|ZD52F10	dermokine	protein-coding	53.13	10.68	4.974719101	5.24E-16
chr19-1062	chr19	38387760	38388760	+	14.7	1000	"intron (NM_031951, intron 2 of 5)"	AluSx3|SINE|Alu	9086	NM_031951	83889	Hs.664194	NM_031951	ENSG00000171804	WDR87	NYD-SP11	WD repeat domain 87	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr19-1064	chr19	40036263	40037263	+	15.4	1000	Intergenic	L1M2|LINE|L1	-5925	NM_153232	163126	Hs.18949	NM_153232	ENSG00000176396	EID2	CRI2|EID-2	EP300 interacting inhibitor of differentiation 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr19-1066	chr19	40228894	40230147	+	17.9	1253	promoter-TSS (NM_001828)	promoter-TSS (NM_001828)	-851	NM_001828	1178	Hs.889	NM_001828	ENSG00000105205	CLC	GAL10|Gal-10|LGALS10|LGALS10A|LPPL_HUMAN	Charcot-Leyden crystal galectin	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr19-1070	chr19	41532975	41533975	+	16.6	1000	Intergenic	Intergenic	36271	NM_000767	1555	Hs.1360	NM_000767	ENSG00000197408	CYP2B6	CPB6|CYP2B|CYP2B7|CYP2B7P|CYPIIB6|EFVM|IIB1|P450	cytochrome P450 family 2 subfamily B member 6	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr19-1075	chr19	41987123	41988123	+	14.7	1000	"intron (NR_136334, intron 1 of 2)"	L1M2|LINE|L1	18936	NR_136334	100505495	Hs.648878	NR_040109	ENSG00000267107	PCAT19	LINC01190	prostate cancer associated transcript 19 (non-protein coding)	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr19-1079	chr19	42045834	42046834	+	15.4	1000	Intergenic	LTR1|LTR|ERV1	4474	NR_110724	101927931	Hs.158951	NR_110724	ENSG00000270164	LINC01480	-	long intergenic non-protein coding RNA 1480	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr19-108	chr19	30087931	30089698	+	31.4	1767	Intergenic	AluSz|SINE|Alu	-8356	NM_006627	10775	Hs.412870	NM_006627	ENSG00000105171	POP4	RPP29	"POP4 homolog, ribonuclease P/MRP subunit"	protein-coding	31.36	1.94	16.16494845	8.26E-21
chr19-1080	chr19	42177343	42178343	+	14.7	1000	"3' UTR (NM_006890, exon 5 of 5)"	"3' UTR (NM_006890, exon 5 of 5)"	14363	NM_001291485	1087	Hs.74466	NM_006890	ENSG00000007306	CEACAM7	CGM2	carcinoembryonic antigen related cell adhesion molecule 7	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr19-1086	chr19	42279095	42280351	+	17.3	1256	Intergenic	AluJb|SINE|Alu	20295	NM_002483	4680	Hs.466814	NM_002483	ENSG00000086548	CEACAM6	CD66c|CEAL|NCA	carcinoembryonic antigen related cell adhesion molecule 6	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr19-1092	chr19	42890800	42892075	+	19.2	1275	"intron (NM_032488, intron 3 of 3)"	CpG	3007	NM_032488	84518	Hs.148590	NM_032488	ENSG00000105427	CNFN	PLAC8L2	cornifelin	protein-coding	19.2	2.43	7.901234568	1.91E-09
chr19-1097	chr19	42956266	42958089	+	26.9	1823	"intron (NR_073179, intron 1 of 1)"	"intron (NR_073179, intron 1 of 1)"	-9977	NM_198477	284340	Hs.445586	NM_198477	ENSG00000189377	CXCL17	DMC|Dcip1|UNQ473|VCC-1|VCC1	C-X-C motif chemokine ligand 17	protein-coding	26.88	4.85	5.542268041	7.61E-10
chr19-110	chr19	32811200	32812466	+	23	1266	Intergenic	MIR|SINE|MIR	-24681	NM_014910	22847	Hs.205392	NM_014910	ENSG00000168813	ZNF507	-	zinc finger protein 507	protein-coding	23.04	1.46	15.78082192	5.41E-16
chr19-1103	chr19	43078777	43079777	+	14.7	1000	"intron (NR_073180, intron 2 of 2)"	LTR49-int|LTR|ERV1	19805	NM_001816	1088	Hs.41	NM_001816	ENSG00000124469	CEACAM8	CD66b|CD67|CGM6|NCA-95	carcinoembryonic antigen related cell adhesion molecule 8	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr19-1105	chr19	43194425	43195425	+	14.1	1000	Intergenic	L1MB4|LINE|L1	49743	NM_021016	5671	Hs.654413	NM_021016	ENSG00000221826	PSG3	-	pregnancy specific beta-1-glycoprotein 3	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr19-1107	chr19	45199519	45200519	+	14.1	1000	Intergenic	AluJo|SINE|Alu	-2402	NM_001039213	388551	Hs.456381	NM_001039213	ENSG00000213892	CEACAM16	CEAL2|DFNA4B	carcinoembryonic antigen related cell adhesion molecule 16	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr19-1108	chr19	45338936	45339936	+	13.4	1000	Intergenic	AluJr|SINE|Alu	-9957	NM_002856	5819	Hs.655455	NM_002856	ENSG00000130202	NECTIN2	CD112|HVEB|PRR2|PVRL2|PVRR2	nectin cell adhesion molecule 2	protein-coding	13.44	2.43	5.530864198	2.99E-05
chr19-1117	chr19	46711416	46712416	+	14.7	1000	Intergenic	THE1D|LTR|ERVL-MaLR	-1583	NR_027003	93429	Hs.569940	NR_027003	ENSG00000268460	LOC93429	-	uncharacterized LOC93429	ncRNA	14.72	0	15.16333034	3.99E-13
chr19-1123	chr19	46972494	46975560	+	45.4	3066	"exon (NM_018215, exon 2 of 3)"	"exon (NM_018215, exon 2 of 3)"	793	NM_018215	55228	Hs.8395	NM_018215	ENSG00000182013	PNMAL1	-	paraneoplastic Ma antigen family like 1	protein-coding	45.45	3.88	11.71391753	3.74E-25
chr19-1126	chr19	47137818	47138818	+	15.4	1000	promoter-TSS (NM_033258)	promoter-TSS (NM_033258)	-379	NM_033258	94235	Hs.283961	NM_033258	ENSG00000167414	GNG8	-	G protein subunit gamma 8	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr19-1131	chr19	48053031	48054031	+	15.4	1000	"intron (NM_001277075, intron 1 of 14)"	AluSz|SINE|Alu	5582	NM_001277075	84215	Hs.14161	NM_032255	ENSG00000118156	ZNF541	-	zinc finger protein 541	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr19-1132	chr19	48146645	48147645	+	14.1	1000	"intron (NM_015711, intron 1 of 14)"	MIR|SINE|MIR	35692	NM_015711	29998	Hs.97244	NM_015711	ENSG00000063169	GLTSCR1	-	glioma tumor suppressor candidate region gene 1	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr19-1133	chr19	48161365	48162365	+	14.7	1000	"intron (NM_015711, intron 1 of 14)"	AluSz|SINE|Alu	50412	NM_015711	29998	Hs.97244	NM_015711	ENSG00000063169	GLTSCR1	-	glioma tumor suppressor candidate region gene 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr19-1136	chr19	49054410	49055410	+	14.1	1000	promoter-TSS (NM_177973)	promoter-TSS (NM_177973)	-519	NM_177973	6820	Hs.369331	NM_004605	ENSG00000088002	SULT2B1	HSST2	sulfotransferase family 2B member 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr19-1141	chr19	51067503	51068503	+	14.7	1000	"intron (NM_001080457, intron 1 of 2)"	"intron (NM_001080457, intron 1 of 2)"	3299	NM_001080457	94030	Hs.120873	NM_001080457	ENSG00000131409	LRRC4B	HSM|LRIG4	leucine rich repeat containing 4B	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr19-1144	chr19	51142114	51144072	+	27.5	1958	promoter-TSS (NM_001160329)	promoter-TSS (NM_001160329)	-1	NM_001160329	84258	Hs.515554	NM_032298	ENSG00000213023	SYT3	SytIII	synaptotagmin 3	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr19-1147	chr19	51364273	51365273	+	15.4	1000	TTS (NM_001648)	TTS (NM_001648)	6602	NM_001648	354	Hs.171995	NM_001648	ENSG00000142515	KLK3	APS|KLK2A1|PSA|hK3	kallikrein related peptidase 3	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr19-1148	chr19	51419557	51420557	+	14.7	1000	Intergenic	Intergenic	-6063	NM_001302961	9622	Hs.218366	NM_004917	ENSG00000167749	KLK4	AI2A1|ARM1|EMSP|EMSP1|KLK-L1|PRSS17|PSTS|kallikrein	kallikrein related peptidase 4	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr19-1149	chr19	51493754	51494754	+	15.4	1000	Intergenic	Intergenic	-6934	NM_001207053	5650	Hs.151254	NM_005046	ENSG00000169035	KLK7	PRSS6|SCCE|hK7	kallikrein related peptidase 7	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr19-115	chr19	46101783	46103165	+	26.9	1382	"intron (NM_005282, intron 1 of 1)"	"intron (NM_005282, intron 1 of 1)"	2992	NM_005282	2828	Hs.17170	NM_005282	ENSG00000177464	GPR4	-	G protein-coupled receptor 4	protein-coding	26.88	0	27.68955974	1.92E-29
chr19-1152	chr19	51665694	51666694	+	14.1	1000	"intron (NR_110732, intron 2 of 4)"	L2|LINE|L2	-4391	NR_047529	284367	Hs.132045	NR_002804	ENSG00000171101	SIGLEC17P	HSPC078|SIGLECP2|SIGLECP3	"sialic acid binding Ig like lectin 17, pseudogene"	pseudo	14.08	1.94	7.257731959	6.14E-07
chr19-1156	chr19	51932901	51933901	+	14.7	1000	Intergenic	AluSx1|SINE|Alu	-12344	NM_001171157	89790	Hs.284813	NM_033130	ENSG00000142512	SIGLEC10	PRO940|SIGLEC-10|SLG2	sialic acid binding Ig like lectin 10	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr19-1157	chr19	52129151	52130151	+	14.7	1000	"intron (NM_003830, intron 7 of 8)"	L1MB8|LINE|L1	4076	NM_003830	8778	Hs.310333	NM_003830	ENSG00000105501	SIGLEC5	CD170|CD33L2|OB-BP2|OBBP2|SIGLEC-5	sialic acid binding Ig like lectin 5	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr19-116	chr19	47527504	47529019	+	27.5	1515	"intron (NM_002517, intron 3 of 11)"	AluSq|SINE|Alu	5160	NM_002517	4861	Hs.79564	NM_002517	ENSG00000130751	NPAS1	MOP5|PASD5|bHLHe11	neuronal PAS domain protein 1	protein-coding	27.52	1.94	14.18556701	2.90E-17
chr19-1163	chr19	54011248	54012248	+	15.4	1000	Intergenic	Intergenic	-12429	NM_018555	55422	Hs.185674	NM_018555	ENSG00000130844	ZNF331	RITA|ZNF361|ZNF463	zinc finger protein 331	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr19-1172	chr19	55880035	55884402	+	60.8	4367	promoter-TSS (NM_001267718)	promoter-TSS (NM_001267718)	-387	NM_000641	3589	Hs.467304	NM_000641	ENSG00000095752	IL11	AGIF|IL-11	interleukin 11	protein-coding	60.81	9.22	6.595444685	6.84E-23
chr19-118	chr19	49924276	49925661	+	25.6	1385	TTS (NM_178449)	TTS (NM_178449)	1730	NM_178449	113091	Hs.339845	NM_178449	ENSG00000142538	PTH2	TIP39	parathyroid hormone 2	protein-coding	25.6	4.85	5.278350515	4.26E-09
chr19-141	chr19	2493851	2496151	+	44.8	2300	Intergenic	CpG	18878	NM_015675	4616	Hs.110571	NM_015675	ENSG00000099860	GADD45B	GADD45BETA|MYD118	growth arrest and DNA damage inducible beta	protein-coding	44.81	0.97	46.19587629	2.83E-45
chr19-153	chr19	30269111	30270400	+	22.4	1289	Intergenic	Intergenic	-33146	NM_001322261	898	Hs.244723	NM_001238	ENSG00000105173	CCNE1	CCNE|pCCNE1	cyclin E1	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr19-154	chr19	31864976	31866393	+	23.7	1417	Intergenic	Intergenic	-25253	NM_020856	57616	Hs.278436	NM_020856	ENSG00000121297	TSHZ3	TSH3|ZNF537	teashirt zinc finger homeobox 3	protein-coding	23.68	5.34	4.434456929	4.49E-07
chr19-157	chr19	42439596	42441384	+	32	1788	Intergenic	Intergenic	7518	NR_135626	100505585		NR_135626	ENSG00000076928	LOC100505585	-	uncharacterized LOC100505585	ncRNA	32	4.85	6.597938144	5.03E-13
chr19-158	chr19	43000514	43003575	+	41.6	3061	"intron (NR_073180, intron 2 of 2)"	"intron (NR_073180, intron 2 of 2)"	30617	NM_001712	634	Hs.512682	NM_001712	ENSG00000079385	CEACAM1	BGP|BGP1|BGPI	carcinoembryonic antigen related cell adhesion molecule 1	protein-coding	41.61	8.74	4.760869565	2.55E-12
chr19-159	chr19	43134488	43135744	+	23.7	1256	"intron (NR_073180, intron 2 of 2)"	MIR|SINE|MIR	-36034	NM_001816	1088	Hs.41	NM_001816	ENSG00000124469	CEACAM8	CD66b|CD67|CGM6|NCA-95	carcinoembryonic antigen related cell adhesion molecule 8	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr19-160	chr19	49928334	49932065	+	64	3731	"exon (NM_001195256, exon 1 of 3)"	"exon (NM_001195256, exon 1 of 3)"	511	NM_001195256	100507003	Hs.553831	NM_001195256	ENSG00000261949	GFY	Goofy	golgi associated olfactory signaling regulator	protein-coding	64.01	9.71	6.592173018	1.93E-24
chr19-161	chr19	51742223	51743934	+	29.4	1711	"3' UTR (NM_001772, exon 7 of 7)"	"3' UTR (NM_001772, exon 7 of 7)"	-11254	NR_102324	284369	Hs.381087	NM_173635	ENSG00000179213	SIGLECL1	C19orf75|SIGLEC23P|SIGLECP7	SIGLEC family like 1	protein-coding	29.44	3.88	7.587628866	2.58E-13
chr19-164	chr19	3027289	3030419	+	62.1	3130	"intron (NM_001144761, intron 2 of 19)"	CpG-12459	311	NM_003260	7089	Hs.332173	NM_003260	ENSG00000065717	TLE2	ESG|ESG2|GRG2	transducin like enhancer of split 2	protein-coding	62.09	6.31	9.839936609	1.16E-30
chr19-165	chr19	7659715	7660715	+	19.8	1000	promoter-TSS (NM_020902)	promoter-TSS (NM_020902)	-573	NM_020902	57662	Hs.17686	NM_020902	ENSG00000076826	CAMSAP3	KIAA1543|NEZHA|PPP1R80	calmodulin regulated spectrin associated protein family member 3	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr19-166	chr19	10139118	10141264	+	40.3	2146	Intergenic	HERVH-int|LTR|ERV1	-8839	NR_049855	100847093		NR_049855	ENSG00000266204	MIR5589	-	microRNA 5589	ncRNA	40.33	9.71	4.153450051	1.52E-10
chr19-169	chr19	18720303	18726064	+	114.6	5761	promoter-TSS (NM_012109)	promoter-TSS (NM_012109)	-499	NM_012109	25789	Hs.329850	NM_012109	ENSG00000105696	TMEM59L	BSMAP|C19orf4	transmembrane protein 59 like	protein-coding	114.57	9.71	11.79917611	6.82E-62
chr19-175	chr19	41634718	41635996	+	23.7	1278	Intergenic	AluJo|SINE|Alu	15020	NR_135528	1572	Hs.558318	NM_000774	ENSG00000197446	CYP2F1	C2F1|CYP2F|CYPIIF1	cytochrome P450 family 2 subfamily F member 1	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr19-177	chr19	42180857	42181857	+	19.8	1000	"exon (NM_006890, exon 4 of 5)"	"exon (NM_006890, exon 4 of 5)"	10849	NM_001291485	1087	Hs.74466	NM_006890	ENSG00000007306	CEACAM7	CGM2	carcinoembryonic antigen related cell adhesion molecule 7	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr19-182	chr19	43833943	43835889	+	35.2	1946	Intergenic	Intergenic	-18292	NR_026881	23574	Hs.721578	NR_026881		PRG1	-	p53-responsive gene 1	ncRNA	35.2	4.85	7.257731959	1.02E-14
chr19-190	chr19	49559446	49563409	+	69.1	3963	Intergenic	CpG	-2430	NM_033142	94027	Hs.681647	NM_033142	ENSG00000196337	CGB7	CG-beta-a|CGB6	chorionic gonadotropin beta subunit 7	protein-coding	69.13	10.68	6.472846442	6.80E-26
chr19-195	chr19	51795904	51797161	+	23	1257	Intergenic	Intergenic	-18570	NM_001101372	402665	Hs.546636	NM_001101372	ENSG00000142549	IGLON5	-	IgLON family member 5	protein-coding	23.04	0	23.73390835	2.80E-24
chr19-207	chr19	18060502	18064848	+	83.9	4346	"intron (NM_002248, intron 1 of 10)"	MIR3|SINE|MIR	564	NM_002248	3780	Hs.158173	NM_002248	ENSG00000105642	KCNN1	KCa2.1|SK1|SKCA1|hSK1	potassium calcium-activated channel subfamily N member 1	protein-coding	83.85	13.59	6.169977925	1.73E-29
chr19-210	chr19	18712919	18716220	+	57.6	3301	"intron (NM_004750, intron 1 of 8)"	"intron (NM_004750, intron 1 of 8)"	3091	NM_004750	9244	Hs.114948	NM_004750	ENSG00000006016	CRLF1	CISS|CISS1|CLF|CLF-1|NR6|zcytor5	cytokine receptor like factor 1	protein-coding	57.61	11.16	5.16218638	3.55E-18
chr19-212	chr19	29140586	29141586	+	17.9	1000	"intron (NR_110759, intron 5 of 9)"	"intron (NR_110759, intron 5 of 9)"	43491	NR_135636	102724908		NR_135636	ENSG00000266976	LOC102724908	-	uncharacterized LOC102724908	ncRNA	17.92	0.97	18.4742268	1.12E-13
chr19-213	chr19	29552462	29554889	+	41.6	2427	Intergenic	Intergenic	60213	NR_040036	100505835	Hs.176539	NR_040036	ENSG00000267014	LINC01532	-	long intergenic non-protein coding RNA 1532	ncRNA	41.61	3.88	10.7242268	5.31E-22
chr19-214	chr19	30651459	30653195	+	29.4	1736	Intergenic	Intergenic	-210973	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	29.44	3.4	8.658823529	1.72E-14
chr19-216	chr19	30853416	30854416	+	19.2	1000	Intergenic	AluSg|SINE|Alu	-9384	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	19.2	1.46	13.15068493	1.82E-12
chr19-217	chr19	30939182	30940457	+	20.5	1275	"intron (NM_014717, intron 2 of 4)"	"intron (NM_014717, intron 2 of 4)"	76519	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr19-219	chr19	33529517	33530517	+	19.2	1000	"intron (NM_033103, intron 2 of 14)"	"intron (NM_033103, intron 2 of 14)"	25807	NM_033103	85415	Hs.466435	NM_033103	ENSG00000131941	RHPN2	P76RBE|RHOBP	rhophilin Rho GTPase binding protein 2	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr19-228	chr19	42275513	42276513	+	18.6	1000	TTS (NM_002483)	TTS (NM_002483)	16585	NM_002483	4680	Hs.466814	NM_002483	ENSG00000086548	CEACAM6	CD66c|CEAL|NCA	carcinoembryonic antigen related cell adhesion molecule 6	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr19-233	chr19	48023087	48025005	+	34.6	1918	"3' UTR (NM_001277075, exon 15 of 15)"	"3' UTR (NM_001277075, exon 15 of 15)"	-5531	NM_003827	8775	Hs.126938	NM_003827	ENSG00000105402	NAPA	SNAPA	NSF attachment protein alpha	protein-coding	34.56	4.85	7.125773196	1.02E-14
chr19-234	chr19	49273035	49274439	+	26.9	1404	Intergenic	Intergenic	14921	NM_019113	26291	Hs.283015	NM_019113	ENSG00000105550	FGF21	-	fibroblast growth factor 21	protein-coding	26.88	4.85	5.542268041	7.61E-10
chr19-237	chr19	51085647	51086647	+	19.8	1000	Intergenic	L1MEc|LINE|L1	-14845	NM_001080457	94030	Hs.120873	NM_001080457	ENSG00000131409	LRRC4B	HSM|LRIG4	leucine rich repeat containing 4B	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr19-238	chr19	51656479	51659809	+	57.6	3330	"intron (NR_110732, intron 3 of 4)"	MIR|SINE|MIR	-12441	NR_047529	284367	Hs.132045	NR_002804	ENSG00000171101	SIGLEC17P	HSPC078|SIGLECP2|SIGLECP3	"sialic acid binding Ig like lectin 17, pseudogene"	pseudo	57.61	7.77	7.414414414	3.81E-24
chr19-240	chr19	51981593	51982593	+	19.8	1000	"intron (NM_001278392, intron 1 of 5)"	"intron (NM_001278392, intron 1 of 5)"	196	NM_001278392	729767	Hs.653111	NM_001080405	ENSG00000213822	CEACAM18	-	carcinoembryonic antigen related cell adhesion molecule 18	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr19-242	chr19	54741020	54742299	+	24.3	1279	"intron (NR_104098, intron 9 of 9)"	L1ME3B|LINE|L1	4951	NM_024318	79168	Hs.688335	NM_024318	ENSG00000244482	LILRA6	CD85b|ILT-8|ILT5|ILT8|LILRB3|LILRB6	leukocyte immunoglobulin like receptor A6	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr19-244	chr19	1235661	1239131	+	61.4	3470	"intron (NM_152769, intron 1 of 8)"	CpG	594	NM_152769	255057	Hs.346575	NM_152769	ENSG00000099625	CBARP	BARP|C19orf26|DOS	CACN beta subunit associated regulatory protein	protein-coding	61.45	9.22	6.664859002	1.02E-23
chr19-249	chr19	2515690	2516690	+	18.6	1000	"intron (NM_052847, intron 4 of 4)"	AluJb|SINE|Alu	40067	NM_015675	4616	Hs.110571	NM_015675	ENSG00000099860	GADD45B	GADD45BETA|MYD118	growth arrest and DNA damage inducible beta	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr19-251	chr19	6500942	6502672	+	33.9	1730	"intron (NM_006087, intron 1 of 3)"	"intron (NM_006087, intron 1 of 3)"	788	NM_006087	10382	Hs.110837	NM_006087	ENSG00000104833	TUBB4A	DYT4|TUBB4|beta-5	tubulin beta 4A class IVa	protein-coding	33.92	3.4	9.976470588	2.03E-17
chr19-255	chr19	8407235	8408912	+	30.1	1677	promoter-TSS (NM_198471)	promoter-TSS (NM_198471)	73	NM_198471	256949	Hs.745036	NM_198471	ENSG00000186994	KANK3	ANKRD47	KN motif and ankyrin repeat domains 3	protein-coding	30.08	5.82	5.16838488	6.85E-10
chr19-263	chr19	29967768	29968768	+	19.2	1000	"intron (NR_040029, intron 1 of 9)"	MER87|LTR|ERV1	48391	NR_040029	284395	Hs.631601	NR_040029	ENSG00000264515	LOC284395	-	uncharacterized LOC284395	ncRNA	19.2	3.4	5.647058824	1.47E-07
chr19-269	chr19	34494728	34495728	+	18.6	1000	Intergenic	Intergenic	-168124	NM_015578	26065	Hs.744009	NM_015578	ENSG00000257103	LSM14A	C19orf13|FAM61A|RAP55|RAP55A	"LSM14A, mRNA processing body assembly factor"	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr19-276	chr19	40182474	40183474	+	18.6	1000	Intergenic	Intergenic	-11972	NM_020129	56891	Hs.24236	NM_020129	ENSG00000006659	LGALS14	CLC2|PPL13	galectin 14	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr19-277	chr19	41520185	41521185	+	18.6	1000	"intron (NM_000767, intron 8 of 8)"	(GA)n|Simple_repeat|Simple_repeat	23481	NM_000767	1555	Hs.1360	NM_000767	ENSG00000197408	CYP2B6	CPB6|CYP2B|CYP2B7|CYP2B7P|CYPIIB6|EFVM|IIB1|P450	cytochrome P450 family 2 subfamily B member 6	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr19-281	chr19	42329871	42331122	+	21.1	1251	Intergenic	L1M3f|LINE|L1	17298	NM_001291419	147719	Hs.98660	NM_173506	ENSG00000273111	LYPD4	SMR	LY6/PLAUR domain containing 4	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr19-286	chr19	43172927	43174190	+	22.4	1263	Intergenic	Intergenic	71110	NM_021016	5671	Hs.654413	NM_021016	ENSG00000221826	PSG3	-	pregnancy specific beta-1-glycoprotein 3	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr19-288	chr19	46906873	46908381	+	25	1508	Intergenic	Intergenic	9292	NM_032040	83987	Hs.97876	NM_032040	ENSG00000169515	CCDC8	3M3|PPP1R20|p90	coiled-coil domain containing 8	protein-coding	24.96	5.34	4.674157303	9.72E-08
chr19-290	chr19	46949781	46950781	+	17.9	1000	Intergenic	Intergenic	24539	NM_018215	55228	Hs.8395	NM_018215	ENSG00000182013	PNMAL1	-	paraneoplastic Ma antigen family like 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr19-294	chr19	49255175	49260186	+	89	5011	promoter-TSS (NM_001329877)	promoter-TSS (NM_001329877)	-763	NM_001329877	2523	Hs.69747	NM_000148	ENSG00000174951	FUT1	H|HH|HSC	fucosyltransferase 1 (H blood group)	protein-coding	88.97	16.5	5.392121212	7.36E-28
chr19-298	chr19	51471976	51472976	+	19.2	1000	promoter-TSS (NM_001319949)	promoter-TSS (NM_001319949)	-248	NM_001012965	5653	Hs.79361	NM_002774	ENSG00000167755	KLK6	Bssp|Klk7|PRSS18|PRSS9|SP59|hK6	kallikrein related peptidase 6	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr19-302	chr19	51766565	51768845	+	39	2280	"intron (NR_102324, intron 2 of 4)"	"intron (NR_102324, intron 2 of 4)"	568	NM_001308437	284369	Hs.381087	NM_173635	ENSG00000179213	SIGLECL1	C19orf75|SIGLEC23P|SIGLECP7	SIGLEC family like 1	protein-coding	39.04	6.8	5.741176471	1.26E-13
chr19-306	chr19	55633845	55636379	+	41	2534	promoter-TSS (NR_107015)	promoter-TSS (NR_107015)	-452	NR_107015	102466872		NR_107015	ENSG00000275863	MIR7975	hsa-mir-7975	microRNA 7975	ncRNA	40.97	8.74	4.687643021	2.55E-12
chr19-309	chr19	56278255	56279255	+	18.6	1000	Intergenic	Intergenic	-4416	NM_001277397	729974		NM_001277397	ENSG00000229292	RFPL4AL1	-	ret finger protein like 4A like 1	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr19-310	chr19	587967	589580	+	27.5	1613	Intergenic	Intergenic	-1120	NM_001194	610	Hs.124161	NM_001194	ENSG00000099822	HCN2	BCNG-2|BCNG2|HAC-1	hyperpolarization activated cyclic nucleotide gated potassium channel 2	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr19-315	chr19	1469048	1470850	+	34.6	1802	"exon (NM_005883, exon 15 of 15)"	"exon (NM_005883, exon 15 of 15)"	9279	NM_152482	148223	Hs.532840	NM_152482	ENSG00000119559	C19orf25	-	chromosome 19 open reading frame 25	protein-coding	34.56	4.85	7.125773196	1.02E-14
chr19-317	chr19	2303367	2305796	+	39.7	2429	"intron (NM_001101391, intron 1 of 1)"	MLT1D|LTR|ERVL-MaLR	3575	NM_001101391	645191	Hs.371587	NM_001101391	ENSG00000220008	LINGO3	LERN2|LRRN6B	leucine rich repeat and Ig domain containing 3	protein-coding	39.69	4.85	8.183505155	2.73E-18
chr19-321	chr19	7859441	7862869	+	49.3	3428	Intergenic	HERVKC4-int|LTR|ERVK	8785	NR_002931	440508	Hs.568222	NR_002931		CLEC4GP1	-	C-type lectin domain family 4 member G pseudogene 1	pseudo	49.29	9.71	5.076210093	3.28E-15
chr19-322	chr19	7980546	7982485	+	35.8	1939	"exon (NM_001195259, exon 2 of 6)"	"exon (NM_001195259, exon 2 of 6)"	483	NM_001195259	100507588	Hs.646773	NM_001195259	ENSG00000260001	TGFBR3L	TGFR-3L	transforming growth factor beta receptor 3 like	protein-coding	35.84	6.31	5.679873217	7.13E-13
chr19-323	chr19	11399960	11401725	+	28.2	1765	Intergenic	AluSx|SINE|Alu	-5973	NM_001282509	26526	Hs.579784	NM_012466	ENSG00000130167	TSPAN16	TM-8|TM4-B|TM4SF16	tetraspanin 16	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr19-324	chr19	11689042	11690042	+	17.9	1000	promoter-TSS (NM_001322023)	promoter-TSS (NM_001322023)	53	NM_001111034	54	Hs.1211	NM_001611	ENSG00000102575	ACP5	HPAP|TRACP5a|TRACP5b|TRAP|TrATPase	"acid phosphatase 5, tartrate resistant"	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr19-33	chr19	33166957	33168208	+	29.4	1251	"exon (NM_207391, exon 1 of 1)"	"exon (NM_207391, exon 1 of 1)"	1269	NM_207391	388531	Hs.528491	NM_207391	ENSG00000186326	RGS9BP	PERRS|R9AP|RGS9	regulator of G-protein signaling 9 binding protein	protein-coding	29.44	2.43	12.11522634	1.54E-17
chr19-332	chr19	29404625	29406160	+	23	1535	Intergenic	Intergenic	-50646	NR_027318	148145	Hs.112651	NR_027318	ENSG00000267339	LINC00906	-	long intergenic non-protein coding RNA 906	ncRNA	23.04	2.91	7.917525773	4.85E-11
chr19-334	chr19	30756207	30757207	+	18.6	1000	Intergenic	Intergenic	-106593	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr19-335	chr19	31603586	31604869	+	24.3	1283	Intergenic	Intergenic	236204	NR_138034	57616	Hs.278436	NM_020856	ENSG00000121297	TSHZ3	TSH3|ZNF537	teashirt zinc finger homeobox 3	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr19-337	chr19	31851150	31852681	+	24.3	1531	Intergenic	Intergenic	-11484	NM_020856	57616	Hs.278436	NM_020856	ENSG00000121297	TSHZ3	TSH3|ZNF537	teashirt zinc finger homeobox 3	protein-coding	24.32	1.94	12.53608247	5.33E-15
chr19-339	chr19	33854745	33855745	+	17.3	1000	Intergenic	Intergenic	-9330	NM_001806	1054	Hs.429666	NM_001806	ENSG00000153879	CEBPG	GPE1BP|IG/EBP-1	CCAAT/enhancer binding protein gamma	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr19-345	chr19	35721393	35723019	+	28.8	1626	Intergenic	L1M5|LINE|L1	-2578	NM_152481	148109	Hs.128069	NM_152481	ENSG00000177558	FAM187B	TMEM162	family with sequence similarity 187 member B	protein-coding	28.8	5.34	5.393258427	7.39E-10
chr19-346	chr19	35817312	35818667	+	23.7	1355	Intergenic	L1MB8|LINE|L1	-2080	NM_001278417	933	Hs.579691	NM_001771	ENSG00000012124	CD22	SIGLEC-2|SIGLEC2	CD22 molecule	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr19-349	chr19	41698886	41700136	+	16.6	1250	"intron (NM_030622, intron 1 of 8)"	"intron (NM_030622, intron 1 of 8)"	399	NM_030622	29785	Hs.98370	NM_030622	ENSG00000167600	CYP2S1	CYPIIS1	cytochrome P450 family 2 subfamily S member 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr19-356	chr19	44206890	44208277	+	19.8	1387	Intergenic	Intergenic	-12631	NM_019612	56269	Hs.515444	NM_019612	ENSG00000124449	IRGC	CINEMA|IFGGE|IRGC1|Iigp5|R30953_1	immunity related GTPase cinema	protein-coding	19.84	1.46	13.5890411	1.82E-12
chr19-358	chr19	46733157	46734493	+	21.1	1336	"intron (NM_198541, intron 3 of 3)"	"intron (NM_198541, intron 3 of 3)"	816	NM_198541	374918	Hs.546554	NM_198541	ENSG00000188293	IGFL1	APRG644|UNQ644	IGF like family member 1	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr19-359	chr19	47010489	47011836	+	25	1347	"intron (NM_001205281, intron 3 of 3)"	"intron (NM_001205281, intron 3 of 3)"	-11993	NM_020709	57469	Hs.7193	NM_020709	ENSG00000204851	PNMAL2	-	paraneoplastic Ma antigen family like 2	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr19-361	chr19	48895338	48900239	+	84.5	4901	promoter-TSS (NM_000836)	promoter-TSS (NM_000836)	-344	NM_000836	2906	Hs.445015	NM_000836	ENSG00000105464	GRIN2D	EB11|EIEE46|GluN2D|NMDAR2D|NR2D	glutamate ionotropic receptor NMDA type subunit 2D	protein-coding	84.49	9.71	8.701338826	1.24E-38
chr19-362	chr19	49567890	49568890	+	17.9	1000	Intergenic	Intergenic	-1266	NM_006179	4909	Hs.266902	NM_006179	ENSG00000225950	NTF4	GLC10|GLC1O|NT-4|NT-4/5|NT-5|NT4|NT5|NTF5	neurotrophin 4	protein-coding	17.92	1.46	12.2739726	2.41E-11
chr19-367	chr19	51414576	51415830	+	18.6	1254	Intergenic	MIRb|SINE|MIR	-1209	NM_001302961	9622	Hs.218366	NM_004917	ENSG00000167749	KLK4	AI2A1|ARM1|EMSP|EMSP1|KLK-L1|PRSS17|PSTS|kallikrein	kallikrein related peptidase 4	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr19-369	chr19	51801508	51803248	+	29.4	1740	Intergenic	MIR|SINE|MIR	-12724	NM_001101372	402665	Hs.546636	NM_001101372	ENSG00000142549	IGLON5	-	IgLON family member 5	protein-coding	29.44	2.43	12.11522634	1.54E-17
chr19-371	chr19	52182931	52183931	+	17.9	1000	Intergenic	Intergenic	-9256	NM_001316994	147650	Hs.467174	NM_207324	ENSG00000182310	SPACA6	LET7EH|LINC00085|NCRNA00085|SPACA6P	sperm acrosome associated 6	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr19-372	chr19	52240763	52242380	+	27.5	1617	Intergenic	AluJr|SINE|Alu	13579	NM_001193306	2357	Hs.753	NM_002029	ENSG00000171051	FPR1	FMLP|FPR	formyl peptide receptor 1	protein-coding	27.52	4.37	6.297482838	1.19E-10
chr19-375	chr19	54757406	54758662	+	19.8	1256	"intron (NM_001081442, intron 7 of 12)"	"intron (NM_001081442, intron 7 of 12)"	3137	NM_001081443	10990	Hs.655338	NM_006840	ENSG00000105609	LILRB5	CD85C|LIR-8|LIR8	leukocyte immunoglobulin like receptor B5	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr19-376	chr19	55048852	55049852	+	18.6	1000	"intron (NR_136268, intron 6 of 8)"	MIR3|SINE|MIR	5443	NR_104096	90011	Hs.288520	NM_033206	ENSG00000104970	KIR3DX1	KIR3DL0|LENG12	"killer cell immunoglobulin like receptor, three Ig domains X1"	pseudo	18.56	3.88	4.783505155	3.85E-06
chr19-378	chr19	57469814	57470814	+	16.6	1000	Intergenic	Intergenic	118044	NR_024059	100073347	Hs.467337	NR_024059	ENSG00000268654	MIMT1	LINC00067|MIM1|NCRNA00067	MER1 repeat containing imprinted transcript 1 (non-protein coding)	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr19-380	chr19	1321941	1322941	+	16	1000	Intergenic	Intergenic	-32535	NM_032853	84939	Hs.515016	NM_032853	ENSG00000160953	MUM1	EXPAND1|HSPC211|MUM-1	melanoma associated antigen (mutated) 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr19-384	chr19	2500254	2501710	+	23.7	1456	Intergenic	Intergenic	24859	NM_015675	4616	Hs.110571	NM_015675	ENSG00000099860	GADD45B	GADD45BETA|MYD118	growth arrest and DNA damage inducible beta	protein-coding	23.68	1.94	12.20618557	6.71E-14
chr19-386	chr19	2981526	2984497	+	44.8	2971	"intron (NM_024760, intron 4 of 15)"	"intron (NM_024760, intron 4 of 15)"	5475	NM_001143986	79816	Hs.334507	NM_024760	ENSG00000104953	TLE6	GRG6|PREMBL	transducin like enhancer of split 6	protein-coding	44.81	7.28	6.15521978	1.03E-16
chr19-389	chr19	5346906	5347906	+	17.3	1000	Intergenic	L1M4|LINE|L1	-6592	NM_130855	5802	Hs.744928	NM_002850	ENSG00000105426	PTPRS	PTPSIGMA|R-PTP-S|R-PTP-sigma	"protein tyrosine phosphatase, receptor type S"	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr19-392	chr19	10069110	10070110	+	17.9	1000	TTS (NM_015719)	TTS (NM_015719)	-22382	NM_058164	93145	Hs.169743	NM_058164	ENSG00000105088	OLFM2	NOE2|NOELIN2|NOELIN2_V1|OlfC	olfactomedin 2	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr19-395	chr19	13207596	13208846	+	17.3	1250	"3' UTR (NM_001271044, exon 10 of 10)"	"3' UTR (NM_001271044, exon 10 of 10)"	5753	NM_005583	4066	Hs.46446	NM_005583	ENSG00000104903	LYL1	bHLHa18	"LYL1, basic helix-loop-helix family member"	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr19-400	chr19	17558739	17559739	+	16.6	1000	"exon (NM_001190844, exon 1 of 3)"	"exon (NM_001190844, exon 1 of 3)"	137	NM_001190844	100130519	Hs.436603	NM_001190844	ENSG00000188051	TMEM221	-	transmembrane protein 221	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr19-401	chr19	17907235	17908235	+	17.9	1000	"intron (NM_014256, intron 1 of 2)"	"intron (NM_014256, intron 1 of 2)"	1816	NM_014256	10331	Hs.69009	NM_014256	ENSG00000179913	B3GNT3	B3GAL-T8|B3GN-T3|B3GNT-3|HP10328|TMEM3|beta3Gn-T3	"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3"	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr19-411	chr19	30119520	30120520	+	16.6	1000	Intergenic	Intergenic	22850	NR_027368	10775	Hs.412870	NM_006627	ENSG00000105171	POP4	RPP29	"POP4 homolog, ribonuclease P/MRP subunit"	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr19-413	chr19	30746253	30747253	+	17.3	1000	Intergenic	Intergenic	-116547	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr19-415	chr19	31182694	31183945	+	19.8	1251	Intergenic	Intergenic	320019	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr19-417	chr19	33787795	33789403	+	25	1608	Intergenic	Intergenic	4871	NM_001287424	1050	Hs.76171	NM_004364	ENSG00000245848	CEBPA	C/EBP-alpha|CEBP	CCAAT/enhancer binding protein alpha	protein-coding	24.96	2.91	8.577319588	5.77E-12
chr19-418	chr19	34470938	34471938	+	17.3	1000	Intergenic	Intergenic	183687	NM_024076	79047	Hs.221873	NM_024076	ENSG00000153885	KCTD15	-	potassium channel tetramerization domain containing 15	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr19-419	chr19	35521288	35526039	+	74.9	4751	"intron (NM_199037, intron 2 of 2)"	"intron (NM_199037, intron 2 of 2)"	1391	NM_001321605	6324	Hs.436646	NM_001037	ENSG00000105711	SCN1B	ATFB13|BRGDA5|GEFSP1	sodium voltage-gated channel beta subunit 1	protein-coding	74.89	9.71	7.712667353	2.67E-31
chr19-422	chr19	36205567	36206867	+	23	1300	"exon (NM_014383, exon 3 of 7)"	"exon (NM_014383, exon 3 of 7)"	-2704	NM_014727	9757	Hs.92236	NM_014727	ENSG00000272333	KMT2B	CXXC10|HRX2|MLL1B|MLL2|MLL4|TRX2|WBP-7|WBP7	lysine methyltransferase 2B	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr19-423	chr19	39525072	39526072	+	17.9	1000	Intergenic	AluJb|SINE|Alu	-2336	NM_178820	126433	Hs.187461	NM_178820	ENSG00000161243	FBXO27	FBG5|Fbx27	F-box protein 27	protein-coding	17.92	1.46	12.2739726	2.41E-11
chr19-424	chr19	41707370	41708370	+	17.3	1000	"intron (NM_030622, intron 6 of 8)"	"intron (NM_030622, intron 6 of 8)"	8758	NM_030622	29785	Hs.98370	NM_030622	ENSG00000167600	CYP2S1	CYPIIS1	cytochrome P450 family 2 subfamily S member 1	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr19-432	chr19	42896425	42897425	+	17.3	1000	Intergenic	Intergenic	-2481	NM_032488	84518	Hs.148590	NM_032488	ENSG00000105427	CNFN	PLAC8L2	cornifelin	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr19-433	chr19	42899353	42900353	+	17.9	1000	Intergenic	Intergenic	-1427	NR_126041	101930071	Hs.567935	NR_126041	ENSG00000213904	LOC101930071	-	uncharacterized LOC101930071	ncRNA	17.92	2.43	7.374485597	1.53E-08
chr19-436	chr19	43068193	43069767	+	26.2	1574	"intron (NR_073180, intron 2 of 2)"	"intron (NR_073180, intron 2 of 2)"	30102	NM_001816	1088	Hs.41	NM_001816	ENSG00000124469	CEACAM8	CD66b|CD67|CGM6|NCA-95	carcinoembryonic antigen related cell adhesion molecule 8	protein-coding	26.24	0.97	27.05154639	7.61E-22
chr19-438	chr19	43923374	43924374	+	16.6	1000	Intergenic	MER4B|LTR|ERV1	4839	NM_001130011	83639	Hs.97978	NM_031451	ENSG00000131126	TEX101	CT131|GTPR867|NYD-SP8|PRO1884|SGRG|SPATA44|TES101RP	testis expressed 101	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr19-439	chr19	46543137	46544137	+	16.6	1000	"exon (NM_001002923, exon 3 of 4)"	"exon (NM_001002923, exon 3 of 4)"	637	NM_001002923	444882	Hs.531310	NM_001002923	ENSG00000204869	IGFL4	-	IGF like family member 4	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr19-44	chr19	30567897	30569150	+	28.2	1253	Intergenic	Intergenic	135377	NM_003796	8725	Hs.466391	NM_003796	ENSG00000105176	URI1	C19orf2|NNX3|PPP1R19|RMP|URI	"URI1, prefoldin like chaperone"	protein-coding	28.16	1.46	19.28767123	5.10E-21
chr19-441	chr19	46604031	46605031	+	17.3	1000	Intergenic	L1PA10|LINE|L1	23400	NM_207393	388555	Hs.365496	NM_207393	ENSG00000188624	IGFL3	UNQ483	IGF like family member 3	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr19-445	chr19	48166030	48167030	+	17.9	1000	"intron (NM_015711, intron 1 of 14)"	AluSz|SINE|Alu	-50071	NM_014601	30846	Hs.744963	NM_014601	ENSG00000024422	EHD2	PAST2	EH domain containing 2	protein-coding	17.92	0	18.4597065	9.96E-18
chr19-452	chr19	51063451	51064710	+	20.5	1259	"intron (NM_001080457, intron 1 of 2)"	AluSz|SINE|Alu	7222	NM_001080457	94030	Hs.120873	NM_001080457	ENSG00000131409	LRRC4B	HSM|LRIG4	leucine rich repeat containing 4B	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr19-454	chr19	51572189	51573189	+	17.9	1000	Intergenic	L2a|LINE|L2	-4322	NM_015596	26085	Hs.165296	NM_015596	ENSG00000167759	KLK13	KLK-L4|KLKL4	kallikrein related peptidase 13	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr19-456	chr19	51929344	51930344	+	17.3	1000	Intergenic	Intergenic	-8787	NM_001171157	89790	Hs.284813	NM_033130	ENSG00000142512	SIGLEC10	PRO940|SIGLEC-10|SLG2	sialic acid binding Ig like lectin 10	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr19-458	chr19	54763398	54764656	+	19.8	1258	Intergenic	L1M1|LINE|L1	-2856	NM_006840	10990	Hs.655338	NM_006840	ENSG00000105609	LILRB5	CD85C|LIR-8|LIR8	leukocyte immunoglobulin like receptor B5	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr19-461	chr19	55401075	55402075	+	16.6	1000	"3' UTR (NM_002000, exon 5 of 5)"	"3' UTR (NM_002000, exon 5 of 5)"	-15933	NM_001242356	9437	Hs.97084	NM_004829	ENSG00000189430	NCR1	CD335|LY94|NK-p46|NKP46	natural cytotoxicity triggering receptor 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr19-471	chr19	1764792	1767140	+	32.6	2348	"intron (NM_001080488, intron 1 of 1)"	"intron (NM_001080488, intron 1 of 1)"	12304	NM_001080488	390874	Hs.654347	NM_001080488	ENSG00000205922	ONECUT3	OC3	one cut homeobox 3	protein-coding	32.64	1.94	16.82474227	5.00E-22
chr19-473	chr19	2608215	2610471	+	41	2256	"intron (NM_052847, intron 2 of 4)"	MER96B|DNA|hAT	-21370	NR_107004	102465838		NR_107004	ENSG00000277904	MIR7850	hsa-mir-7850	microRNA 7850	ncRNA	40.97	4.85	8.44742268	3.22E-19
chr19-476	chr19	2656753	2657753	+	15.4	1000	"intron (NM_052847, intron 1 of 4)"	AluJb|SINE|Alu	26540	NR_107004	102465838		NR_107004	ENSG00000277904	MIR7850	hsa-mir-7850	microRNA 7850	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr19-480	chr19	10098116	10099116	+	16	1000	"intron (NM_015719, intron 27 of 66)"	AluJr|SINE|Alu	22531	NM_015719	50509	Hs.235368	NM_015719	ENSG00000080573	COL5A3	-	collagen type V alpha 3 chain	protein-coding	16	3.88	4.12371134	7.91E-05
chr19-481	chr19	10124779	10125779	+	17.3	1000	"intron (NM_015725, intron 1 of 5)"	AluSx|SINE|Alu	1354	NM_015725	50700	Hs.675522	NM_015725	ENSG00000080511	RDH8	PRRDH|SDR28C2	retinol dehydrogenase 8 (all-trans)	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr19-484	chr19	13123479	13128547	+	87.1	5068	"intron (NM_002501, intron 1 of 9)"	"intron (NM_002501, intron 1 of 9)"	-8772	NM_001271044	4784	Hs.257970	NM_002501	ENSG00000008441	NFIX	CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2	nuclear factor I X	protein-coding	87.05	12.62	6.8977813	9.31E-34
chr19-485	chr19	13167284	13171047	+	45.4	3763	"intron (NM_001271043, intron 2 of 10)"	"intron (NM_001271043, intron 2 of 10)"	33770	NM_001271043	4784	Hs.257970	NM_002501	ENSG00000008441	NFIX	CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2	nuclear factor I X	protein-coding	45.45	11.16	4.072580645	1.73E-11
chr19-487	chr19	13953398	13954398	+	16	1000	Intergenic	Intergenic	-6425	NR_029495	407010		NR_029495	ENSG00000207980	MIR23A	MIRN23A|hsa-mir-23a|miRNA23A|mir-23a	microRNA 23a	ncRNA	16	3.4	4.705882353	2.25E-05
chr19-491	chr19	18496065	18497065	+	16	1000	promoter-TSS (NR_036156)	promoter-TSS (NR_036156)	-205	NM_004864	9518	Hs.616962	NM_004864	ENSG00000130513	GDF15	GDF-15|MIC-1|MIC1|NAG-1|PDF|PLAB|PTGFB	growth differentiation factor 15	protein-coding	16	3.88	4.12371134	7.91E-05
chr19-495	chr19	18906081	18907081	+	16.6	1000	Intergenic	Intergenic	-4467	NM_000095	1311	Hs.1584	NM_000095	ENSG00000105664	COMP	EDM1|EPD1|MED|PSACH|THBS5|TSP5	cartilage oligomeric matrix protein	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr19-500	chr19	29379137	29380137	+	16	1000	Intergenic	Intergenic	-76401	NR_027318	148145	Hs.112651	NR_027318	ENSG00000267339	LINC00906	-	long intergenic non-protein coding RNA 906	ncRNA	16	3.88	4.12371134	7.91E-05
chr19-502	chr19	29472332	29473332	+	16.6	1000	Intergenic	Intergenic	13457	NR_110760	102724958	Hs.112651	NR_110760		LOC102724958	-	uncharacterized LOC102724958	ncRNA	16.64	1.46	11.39726027	2.99E-10
chr19-503	chr19	30241030	30242030	+	16.6	1000	Intergenic	Intergenic	-34834	NM_001256047	83636	Hs.529094	NM_031448	ENSG00000131943	C19orf12	MPAN|NBIA3|NBIA4|SPG43	chromosome 19 open reading frame 12	protein-coding	16.64	0	17.14115603	3.68E-16
chr19-505	chr19	30255531	30256531	+	16.6	1000	Intergenic	AluJo|SINE|Alu	-46870	NM_001322261	898	Hs.244723	NM_001238	ENSG00000105173	CCNE1	CCNE|pCCNE1	cyclin E1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr19-507	chr19	30842836	30843836	+	16.6	1000	Intergenic	Intergenic	-19964	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	16.64	0	17.14115603	3.68E-16
chr19-508	chr19	30863510	30864841	+	24.3	1331	"intron (NM_014717, intron 1 of 4)"	"intron (NM_014717, intron 1 of 4)"	875	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	24.32	5.34	4.554307116	9.72E-08
chr19-510	chr19	31655764	31656764	+	16.6	1000	"intron (NR_138035, intron 2 of 3)"	"intron (NR_138035, intron 2 of 3)"	184167	NR_138034	57616	Hs.278436	NM_020856	ENSG00000121297	TSHZ3	TSH3|ZNF537	teashirt zinc finger homeobox 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr19-513	chr19	33301687	33302687	+	17.9	1000	Intergenic	Intergenic	58496	NM_001243036	11136	Hs.743345	NM_014270	ENSG00000021488	SLC7A9	BAT1|CSNU3	solute carrier family 7 member 9	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr19-514	chr19	33756692	33757944	+	19.2	1252	Intergenic	AluJb|SINE|Alu	36152	NM_001287424	1050	Hs.76171	NM_004364	ENSG00000245848	CEBPA	C/EBP-alpha|CEBP	CCAAT/enhancer binding protein alpha	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr19-515	chr19	33783386	33784386	+	16.6	1000	Intergenic	Intergenic	9584	NM_001287424	1050	Hs.76171	NM_004364	ENSG00000245848	CEBPA	C/EBP-alpha|CEBP	CCAAT/enhancer binding protein alpha	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr19-516	chr19	34227228	34230031	+	39	2803	"intron (NM_001127896, intron 2 of 3)"	"intron (NM_001127896, intron 2 of 3)"	53195	NM_022467	64377	Hs.165724	NM_022467	ENSG00000124302	CHST8	GALNAC4ST1|GalNAc4ST|PSS3	carbohydrate sulfotransferase 8	protein-coding	39.04	6.8	5.741176471	1.26E-13
chr19-519	chr19	34649219	34650543	+	18.6	1324	Intergenic	AluSx1|SINE|Alu	-13471	NM_015578	26065	Hs.744009	NM_015578	ENSG00000257103	LSM14A	C19orf13|FAM61A|RAP55|RAP55A	"LSM14A, mRNA processing body assembly factor"	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr19-521	chr19	35531419	35532702	+	19.2	1283	TTS (NM_001321605)	TTS (NM_001321605)	650	NM_182983	3249	Hs.182385	NM_002151	ENSG00000105707	HPN	TMPRSS1	hepsin	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr19-526	chr19	39501032	39502032	+	17.3	1000	Intergenic	MER66B|LTR|ERV1	21704	NM_178820	126433	Hs.187461	NM_178820	ENSG00000161243	FBXO27	FBG5|Fbx27	F-box protein 27	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr19-528	chr19	41493826	41494826	+	16	1000	Intergenic	L1M2|LINE|L1	-2878	NM_000767	1555	Hs.1360	NM_000767	ENSG00000197408	CYP2B6	CPB6|CYP2B|CYP2B7|CYP2B7P|CYPIIB6|EFVM|IIB1|P450	cytochrome P450 family 2 subfamily B member 6	protein-coding	16	0.97	16.49484536	3.54E-11
chr19-530	chr19	41560817	41562459	+	23	1642	Intergenic	Intergenic	-32718	NM_000766	1553	Hs.567252	NM_000766	ENSG00000197838	CYP2A13	CPAD|CYP2A|CYPIIA13	cytochrome P450 family 2 subfamily A member 13	protein-coding	23.04	4.37	5.272311213	2.46E-08
chr19-531	chr19	41725571	41727531	+	35.2	1960	"exon (NM_001699, exon 2 of 19)"	"exon (NM_001699, exon 2 of 19)"	1447	NM_001699	558	Hs.590970	NM_001699	ENSG00000167601	AXL	ARK|JTK11|Tyro7|UFO	AXL receptor tyrosine kinase	protein-coding	35.2	3.88	9.072164948	5.09E-17
chr19-533	chr19	41990678	41991678	+	17.3	1000	"intron (NR_136334, intron 1 of 2)"	L2a|LINE|L2	15381	NR_136334	100505495	Hs.648878	NR_040109	ENSG00000267107	PCAT19	LINC01190	prostate cancer associated transcript 19 (non-protein coding)	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr19-542	chr19	42948051	42949051	+	16.6	1000	"intron (NR_073179, intron 1 of 1)"	"intron (NR_073179, intron 1 of 1)"	-1351	NM_198477	284340	Hs.445586	NM_198477	ENSG00000189377	CXCL17	DMC|Dcip1|UNQ473|VCC-1|VCC1	C-X-C motif chemokine ligand 17	protein-coding	16.64	0	17.14115603	3.68E-16
chr19-546	chr19	46675632	46676632	+	17.3	1000	Intergenic	AluJb|SINE|Alu	24632	NM_001135113	147920	Hs.99376	NM_001002915	ENSG00000204866	IGFL2	UNQ645|VPRI645	IGF like family member 2	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr19-547	chr19	46684677	46685932	+	19.8	1255	Intergenic	L1MEf|LINE|L1	21015	NR_135234	645553	Hs.613068	NR_135234		IGFL2-AS1	-	IGFL2 antisense RNA 1	ncRNA	19.84	4.85	4.090721649	1.08E-05
chr19-55	chr19	1755256	1758547	+	54.4	3291	"intron (NM_001080488, intron 1 of 1)"	"intron (NM_001080488, intron 1 of 1)"	3239	NM_001080488	390874	Hs.654347	NM_001080488	ENSG00000205922	ONECUT3	OC3	one cut homeobox 3	protein-coding	54.41	8.74	6.225400458	9.88E-20
chr19-552	chr19	47531362	47532362	+	17.3	1000	"intron (NM_002517, intron 3 of 11)"	MIR|SINE|MIR	-6725	NM_001321086	4861	Hs.79564	NM_002517	ENSG00000130751	NPAS1	MOP5|PASD5|bHLHe11	neuronal PAS domain protein 1	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr19-553	chr19	47922321	47927349	+	67.2	5028	"intron (NM_001346148, intron 1 of 12)"	"intron (NM_001346148, intron 1 of 12)"	655	NM_001346148	56917	Hs.380923	NM_020160	ENSG00000105419	MEIS3	MRG2	Meis homeobox 3	protein-coding	67.21	8.25	8.146666667	2.70E-29
chr19-555	chr19	48026720	48027720	+	16.6	1000	"intron (NM_001277075, intron 12 of 14)"	L1ME1|LINE|L1	-8705	NM_003827	8775	Hs.126938	NM_003827	ENSG00000105402	NAPA	SNAPA	NSF attachment protein alpha	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr19-556	chr19	48065526	48066526	+	16.6	1000	Intergenic	L1MB5|LINE|L1	-6913	NM_001277075	84215	Hs.14161	NM_032255	ENSG00000118156	ZNF541	-	zinc finger protein 541	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr19-564	chr19	51641150	51642150	+	16.6	1000	Intergenic	Intergenic	-3908	NM_001277201	27036	Hs.655393	NM_014385	ENSG00000168995	SIGLEC7	AIRM1|CD328|CDw328|D-siglec|QA79|SIGLEC-7|SIGLEC19P|SIGLECP2|p75|p75/AIRM1	sialic acid binding Ig like lectin 7	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr19-568	chr19	52009500	52010798	+	19.2	1298	Intergenic	MSTA|LTR|ERVL-MaLR	-5106	NM_053003	89858	Hs.249741	NM_033329	ENSG00000254521	SIGLEC12	S2V|SIGLECL1|SLG|Siglec-XII	sialic acid binding Ig like lectin 12 (gene/pseudogene)	protein-coding	19.2	2.43	7.901234568	1.91E-09
chr19-57	chr19	14316137	14317137	+	25	1000	"intron (NM_001008701, intron 1 of 23)"	CpG	360	NM_001008701	22859	Hs.94229	NM_014921	ENSG00000072071	ADGRL1	CIRL1|CL1|LEC2|LPHN1	adhesion G protein-coupled receptor L1	protein-coding	24.96	1.94	12.86597938	5.33E-15
chr19-570	chr19	52223936	52224936	+	16	1000	"intron (NM_001523, intron 1 of 4)"	MIR|SINE|MIR	2809	NM_001523	3036	Hs.57697	NM_001523	ENSG00000105509	HAS1	HAS	hyaluronan synthase 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr19-573	chr19	54760210	54761210	+	16.6	1000	"intron (NM_001081442, intron 2 of 12)"	"intron (NM_001081442, intron 2 of 12)"	461	NM_001081443	10990	Hs.655338	NM_006840	ENSG00000105609	LILRB5	CD85C|LIR-8|LIR8	leukocyte immunoglobulin like receptor B5	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr19-574	chr19	54774240	54775520	+	20.5	1280	Intergenic	Intergenic	9519	NM_001278405	10288	Hs.655652	NM_005874	ENSG00000131042	LILRB2	CD85D|ILT-4|ILT4|LIR-2|LIR2|MIR-10|MIR10	leukocyte immunoglobulin like receptor B2	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr19-575	chr19	54824269	54825909	+	27.5	1640	promoter-TSS (NM_181986)	promoter-TSS (NM_181986)	-680	NM_181986	353514	Hs.710986	NM_021250	ENSG00000187116	LILRA5	CD85|CD85F|ILT-11|ILT11|LILRB7|LIR-9|LIR9	leukocyte immunoglobulin like receptor A5	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr19-58	chr19	18220736	18222247	+	27.5	1511	"intron (NM_015016, intron 2 of 26)"	"intron (NM_015016, intron 2 of 26)"	-11865	NM_001290024	3594	Hs.567294	NM_005535	ENSG00000096996	IL12RB1	CD212|IL-12R-BETA1|IL12RB|IMD30	interleukin 12 receptor subunit beta 1	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr19-580	chr19	55962976	55963976	+	16.6	1000	TTS (NM_001136201)	TTS (NM_001136201)	-9246	NM_001145176	729956	Hs.6664	NM_175908	ENSG00000187902	SHISA7	-	shisa family member 7	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr19-586	chr19	1449589	1451997	+	36.5	2408	"intron (NM_005883, intron 1 of 14)"	L2b|LINE|L2	645	NM_005883	10297	Hs.446376	NM_005883	ENSG00000115266	APC2	APCL|SOTOS3	"APC2, WNT signaling pathway regulator"	protein-coding	36.48	4.85	7.521649485	1.37E-15
chr19-592	chr19	2558305	2559305	+	16.6	1000	"intron (NM_052847, intron 2 of 4)"	AluSx|SINE|Alu	-71908	NR_107004	102465838		NR_107004	ENSG00000277904	MIR7850	hsa-mir-7850	microRNA 7850	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr19-596	chr19	2693941	2695619	+	27.5	1678	"intron (NM_052847, intron 1 of 4)"	MER20|DNA|hAT-Charlie	7966	NM_052847	2788	Hs.515544	NM_052847	ENSG00000176533	GNG7	-	G protein subunit gamma 7	protein-coding	27.52	4.37	6.297482838	1.19E-10
chr19-600	chr19	4583559	4585050	+	26.2	1491	Intergenic	CpG	-24533	NM_032108	10501	Hs.465642	NM_020241	ENSG00000167680	SEMA6B	SEM-SEMA-Y|SEMA-VIB|SEMAN|semaZ	semaphorin 6B	protein-coding	26.24	2.91	9.017182131	6.53E-13
chr19-602	chr19	6587620	6591516	+	66.6	3896	"intron (NM_001330332, intron 2 of 3)"	AluSx1|SINE|Alu	1595	NM_001330332	970	Hs.501497	NM_001252	ENSG00000125726	CD70	CD27-L|CD27L|CD27LG|TNFSF7|TNLG8A	CD70 molecule	protein-coding	66.57	12.13	5.488046167	7.13E-22
chr19-605	chr19	8244824	8245824	+	16	1000	Intergenic	L1M5|LINE|L1	-28893	NM_024552	79603	Hs.515111	NM_024552	ENSG00000090661	CERS4	LASS4|Trh1	ceramide synthase 4	protein-coding	16	1.94	8.24742268	7.67E-08
chr19-606	chr19	8427906	8429680	+	27.5	1774	promoter-TSS (NR_104213)	promoter-TSS (NR_104213)	-218	NR_104213	51129	Hs.9613	NM_016109	ENSG00000167772	ANGPTL4	ARP4|FIAF|HARP|HFARP|NL2|PGAR|TGQTL|UNQ171|pp1158	angiopoietin like 4	protein-coding	27.52	2.91	9.457044674	7.03E-14
chr19-609	chr19	10340484	10341484	+	16	1000	promoter-TSS (NR_036206)	promoter-TSS (NR_036206)	-105	NR_036206	100422925		NR_036206	ENSG00000264266	MIR4322	-	microRNA 4322	ncRNA	16	3.4	4.705882353	2.25E-05
chr19-613	chr19	13624365	13625365	+	16.6	1000	Intergenic	AluJb|SINE|Alu	-7591	NM_023035	773	Hs.501632	NM_000068	ENSG00000141837	CACNA1A	APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6	calcium voltage-gated channel subunit alpha1 A	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr19-614	chr19	14737619	14738902	+	19.8	1283	"intron (NM_032571, intron 14 of 15)"	AluSx|SINE|Alu	5235	NR_132784	106635534		NR_132784		SNORA104	-	"small nucleolar RNA, H/ACA box 104"	snoRNA	19.84	2.43	8.164609053	1.91E-09
chr19-615	chr19	15104215	15105475	+	21.8	1260	"intron (NR_073589, intron 1 of 8)"	"intron (NR_073589, intron 1 of 8)"	-14298	NM_001272087	6511	Hs.515217	NM_005071	ENSG00000105143	SLC1A6	EAAT4	solute carrier family 1 member 6	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr19-616	chr19	15689926	15691212	+	19.8	1286	Intergenic	AluSz|SINE|Alu	-35460	NM_007253	11283	Hs.268554	NM_007253	ENSG00000186526	CYP4F8	CPF8|CYPIVF8	cytochrome P450 family 4 subfamily F member 8	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr19-619	chr19	18104796	18105796	+	16	1000	"intron (NM_002248, intron 10 of 10)"	"intron (NM_002248, intron 10 of 10)"	-6645	NM_001025604	27106	Hs.515249	NM_015683	ENSG00000105643	ARRDC2	CLONE24945|PP2703	arrestin domain containing 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr19-621	chr19	18320688	18321688	+	16.6	1000	"3' UTR (NM_000923, exon 16 of 16)"	"3' UTR (NM_000923, exon 16 of 16)"	5648	NR_134910	102725254	Hs.437211	NR_134910	ENSG00000268650	LOC102725254	-	uncharacterized LOC102725254	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr19-624	chr19	19366127	19367127	+	16	1000	"3' UTR (NM_023002, exon 5 of 5)"	"3' UTR (NM_023002, exon 5 of 5)"	6969	NM_023002	404037	Hs.367829	NM_023002	ENSG00000187664	HAPLN4	BRAL2	hyaluronan and proteoglycan link protein 4	protein-coding	16	1.94	8.24742268	7.67E-08
chr19-628	chr19	28921421	28922421	+	16	1000	Intergenic	Intergenic	-175674	NR_135636	102724908		NR_135636	ENSG00000266976	LOC102724908	-	uncharacterized LOC102724908	ncRNA	16	1.94	8.24742268	7.67E-08
chr19-629	chr19	28938440	28939440	+	16.6	1000	"intron (NR_110759, intron 7 of 9)"	MER51-int|LTR|ERV1	-158655	NR_135636	102724908		NR_135636	ENSG00000266976	LOC102724908	-	uncharacterized LOC102724908	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr19-630	chr19	29361194	29367713	+	96	6519	Intergenic	Intergenic	-91585	NR_027318	148145	Hs.112651	NR_027318	ENSG00000267339	LINC00906	-	long intergenic non-protein coding RNA 906	ncRNA	96.01	13.59	7.064753495	1.02E-37
chr19-636	chr19	29858237	29859661	+	19.8	1424	"intron (NR_040029, intron 9 of 9)"	"intron (NR_040029, intron 9 of 9)"	-154813	NM_006003	7386	Hs.743307	NM_006003	ENSG00000169021	UQCRFS1	RIP1|RIS1|RISP|UQCR5	"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1"	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr19-637	chr19	29987970	29988970	+	15.4	1000	"intron (NR_040029, intron 1 of 9)"	"intron (NR_040029, intron 1 of 9)"	28189	NR_040029	284395	Hs.631601	NR_040029	ENSG00000264515	LOC284395	-	uncharacterized LOC284395	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr19-639	chr19	30227453	30228453	+	15.4	1000	Intergenic	Intergenic	-21257	NM_001256047	83636	Hs.529094	NM_031448	ENSG00000131943	C19orf12	MPAN|NBIA3|NBIA4|SPG43	chromosome 19 open reading frame 12	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr19-645	chr19	30599272	30602233	+	44.8	2961	Intergenic	MIR|SINE|MIR	167606	NM_003796	8725	Hs.466391	NM_003796	ENSG00000105176	URI1	C19orf2|NNX3|PPP1R19|RMP|URI	"URI1, prefoldin like chaperone"	protein-coding	44.81	7.77	5.767052767	6.82E-16
chr19-649	chr19	31307646	31310967	+	44.8	3321	Intergenic	Intergenic	446006	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	44.81	9.22	4.860086768	9.30E-14
chr19-655	chr19	32681087	32682087	+	16	1000	Intergenic	Intergenic	-84765	NR_110694	101927411	Hs.515337	NR_110694	ENSG00000267204	LINC01782	-	long intergenic non-protein coding RNA 1782	ncRNA	16	2.91	5.498281787	4.98E-06
chr19-656	chr19	32798663	32799663	+	16	1000	Intergenic	Intergenic	-37351	NM_014910	22847	Hs.205392	NM_014910	ENSG00000168813	ZNF507	-	zinc finger protein 507	protein-coding	16	2.91	5.498281787	4.98E-06
chr19-657	chr19	33064828	33065828	+	16	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	-6766	NM_004708	9141	Hs.443831	NM_004708	ENSG00000105185	PDCD5	TFAR19	programmed cell death 5	protein-coding	16	3.4	4.705882353	2.25E-05
chr19-659	chr19	33287637	33288637	+	16	1000	Intergenic	AluSx|SINE|Alu	72546	NM_001243036	11136	Hs.743345	NM_014270	ENSG00000021488	SLC7A9	BAT1|CSNU3	solute carrier family 7 member 9	protein-coding	16	3.88	4.12371134	7.91E-05
chr19-661	chr19	33702963	33704248	+	22.4	1285	"intron (NM_019849, intron 3 of 10)"	"intron (NM_019849, intron 3 of 10)"	13151	NM_019849	56301	Hs.58679	NM_019849	ENSG00000130876	SLC7A10	ASC1|HASC-1|asc-1	solute carrier family 7 member 10	protein-coding	22.4	0.97	23.09278351	1.19E-17
chr19-662	chr19	33712149	33713149	+	15.4	1000	"intron (NM_019849, intron 1 of 10)"	"intron (NM_019849, intron 1 of 10)"	4107	NM_019849	56301	Hs.58679	NM_019849	ENSG00000130876	SLC7A10	ASC1|HASC-1|asc-1	solute carrier family 7 member 10	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr19-663	chr19	33774272	33775272	+	16	1000	Intergenic	MLT1K|LTR|ERVL-MaLR	18698	NM_001287424	1050	Hs.76171	NM_004364	ENSG00000245848	CEBPA	C/EBP-alpha|CEBP	CCAAT/enhancer binding protein alpha	protein-coding	16	1.94	8.24742268	7.67E-08
chr19-669	chr19	34357330	34358330	+	15.4	1000	Intergenic	Intergenic	70079	NM_024076	79047	Hs.221873	NM_024076	ENSG00000153885	KCTD15	-	potassium channel tetramerization domain containing 15	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr19-670	chr19	34555477	34556743	+	20.5	1266	Intergenic	Intergenic	-107242	NM_015578	26065	Hs.744009	NM_015578	ENSG00000257103	LSM14A	C19orf13|FAM61A|RAP55|RAP55A	"LSM14A, mRNA processing body assembly factor"	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr19-671	chr19	34572801	34576384	+	42.2	3583	Intergenic	AluSx1|SINE|Alu	-88760	NM_015578	26065	Hs.744009	NM_015578	ENSG00000257103	LSM14A	C19orf13|FAM61A|RAP55|RAP55A	"LSM14A, mRNA processing body assembly factor"	protein-coding	42.25	9.71	4.351184346	8.16E-12
chr19-672	chr19	34618749	34620266	+	25	1517	Intergenic	Intergenic	-43845	NM_015578	26065	Hs.744009	NM_015578	ENSG00000257103	LSM14A	C19orf13|FAM61A|RAP55|RAP55A	"LSM14A, mRNA processing body assembly factor"	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr19-675	chr19	35820661	35821661	+	17.9	1000	"intron (NM_001278417, intron 1 of 12)"	AluSx|SINE|Alu	1089	NM_001771	933	Hs.579691	NM_001771	ENSG00000012124	CD22	SIGLEC-2|SIGLEC2	CD22 molecule	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr19-677	chr19	35978631	35981121	+	37.1	2490	"intron (NM_207392, intron 1 of 5)"	"intron (NM_207392, intron 1 of 5)"	1557	NM_207392	388533	Hs.112457	NM_207392	ENSG00000188508	KRTDAP	KDAP|UNQ467	keratinocyte differentiation associated protein	protein-coding	37.12	7.28	5.098901099	3.68E-12
chr19-681	chr19	40274883	40275883	+	16.6	1000	"intron (NM_001143832, intron 2 of 2)"	"intron (NM_001143832, intron 2 of 2)"	8149	NM_001143832	342900	Hs.451638	NM_001143832	ENSG00000213921	LEUTX	-	leucine twenty homeobox	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr19-682	chr19	40641890	40642890	+	16	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	-45545	NM_001142579	284323	Hs.115140	NM_001010880	ENSG00000197782	ZNF780A	ZNF780	zinc finger protein 780A	protein-coding	16	2.43	6.58436214	7.90E-07
chr19-684	chr19	41982953	41984694	+	31.4	1741	"intron (NR_136334, intron 2 of 2)"	MSTA|LTR|ERVL-MaLR	22736	NR_136334	100505495	Hs.648878	NR_040109	ENSG00000267107	PCAT19	LINC01190	prostate cancer associated transcript 19 (non-protein coding)	ncRNA	31.36	2.91	10.7766323	6.73E-17
chr19-688	chr19	42132465	42133465	+	16.6	1000	"intron (NM_001817, intron 1 of 6)"	"intron (NM_001817, intron 1 of 6)"	477	NM_001817	1089	Hs.12	NM_001817	ENSG00000105352	CEACAM4	CGM7|CGM7_HUMAN|NCA	carcinoembryonic antigen related cell adhesion molecule 4	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr19-69	chr19	42028396	42029968	+	30.7	1572	Intergenic	SATR1|Satellite|Satellite	-12678	NR_110724	101927931	Hs.158951	NR_110724	ENSG00000270164	LINC01480	-	long intergenic non-protein coding RNA 1480	ncRNA	30.72	7.28	4.21978022	9.24E-09
chr19-691	chr19	42217292	42218581	+	20.5	1289	"intron (NM_004363, intron 2 of 9)"	AluSx1|SINE|Alu	5432	NM_001291484	1048	Hs.709196	NM_004363	ENSG00000105388	CEACAM5	CD66e|CEA	carcinoembryonic antigen related cell adhesion molecule 5	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr19-694	chr19	42342455	42343455	+	16.6	1000	"exon (NM_173506, exon 3 of 5)"	"exon (NM_173506, exon 3 of 5)"	4839	NM_001291419	147719	Hs.98660	NM_173506	ENSG00000273111	LYPD4	SMR	LY6/PLAUR domain containing 4	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr19-697	chr19	42679347	42681043	+	27.5	1696	Intergenic	Intergenic	41749	NM_001270615	162989	Hs.515432	NM_133328	ENSG00000160570	DEDD2	FLAME-3|FLAME3	death effector domain containing 2	protein-coding	27.52	5.82	4.728522337	1.71E-08
chr19-70	chr19	42249254	42250907	+	34.6	1653	Intergenic	Intergenic	-9348	NM_002483	4680	Hs.466814	NM_002483	ENSG00000086548	CEACAM6	CD66c|CEAL|NCA	carcinoembryonic antigen related cell adhesion molecule 6	protein-coding	34.56	5.82	5.93814433	6.75E-13
chr19-700	chr19	43011681	43013239	+	23.7	1558	"3' UTR (NM_001024912, exon 8 of 8)"	"3' UTR (NM_001024912, exon 8 of 8)"	20201	NM_001712	634	Hs.512682	NM_001712	ENSG00000079385	CEACAM1	BGP|BGP1|BGPI	carcinoembryonic antigen related cell adhesion molecule 1	protein-coding	23.68	5.34	4.434456929	4.49E-07
chr19-702	chr19	43766438	43767438	+	16.6	1000	"intron (NM_002784, intron 2 of 5)"	"intron (NM_002784, intron 2 of 5)"	6777	NM_001301708	5678	Hs.502092	NM_002784	ENSG00000183668	PSG9	PS34|PSBG-11|PSBG-9|PSG11|PSGII	pregnancy specific beta-1-glycoprotein 9	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr19-703	chr19	45662603	45663603	+	16	1000	"intron (NM_198478, intron 1 of 3)"	"intron (NM_198478, intron 1 of 3)"	305	NM_198478	284353	Hs.299256	NM_198478		NKPD1	-	"NTPase, KAP family P-loop domain containing 1"	protein-coding	16	2.91	5.498281787	4.98E-06
chr19-704	chr19	46259392	46260392	+	16	1000	"intron (NM_001310124, intron 8 of 14)"	AluJo|SINE|Alu	12605	NM_175875	147912	Hs.43314	NM_175875	ENSG00000177045	SIX5	BOR2|DMAHP	SIX homeobox 5	protein-coding	16	3.88	4.12371134	7.91E-05
chr19-705	chr19	46493164	46494706	+	23.7	1542	Intergenic	L1MB5|LINE|L1	-4784	NM_001267723	729440	Hs.515479	NM_001080402	ENSG00000104983	CCDC61	-	coiled-coil domain containing 61	protein-coding	23.68	1.94	12.20618557	6.71E-14
chr19-708	chr19	46633107	46634107	+	16	1000	Intergenic	Intergenic	-5676	NM_207393	388555	Hs.365496	NM_207393	ENSG00000188624	IGFL3	UNQ483	IGF like family member 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr19-709	chr19	46668462	46669462	+	15.4	1000	Intergenic	HERVL32-int|LTR|ERVL	17462	NM_001135113	147920	Hs.99376	NM_001002915	ENSG00000204866	IGFL2	UNQ645|VPRI645	IGF like family member 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr19-713	chr19	46725865	46727395	+	25	1530	Intergenic	MER21C|LTR|ERVL	-6379	NM_198541	374918	Hs.546554	NM_198541	ENSG00000188293	IGFL1	APRG644|UNQ644	IGF like family member 1	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr19-719	chr19	48033954	48034954	+	15.4	1000	"intron (NM_001277075, intron 10 of 14)"	"intron (NM_001277075, intron 10 of 14)"	-15939	NM_003827	8775	Hs.126938	NM_003827	ENSG00000105402	NAPA	SNAPA	NSF attachment protein alpha	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr19-720	chr19	48045466	48046466	+	15.4	1000	"intron (NM_001277075, intron 3 of 14)"	AluSg7|SINE|Alu	13147	NM_001277075	84215	Hs.14161	NM_032255	ENSG00000118156	ZNF541	-	zinc finger protein 541	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr19-722	chr19	49061180	49062180	+	15.4	1000	"intron (NM_177973, intron 1 of 6)"	CpG	6251	NM_177973	6820	Hs.369331	NM_004605	ENSG00000088002	SULT2B1	HSST2	sulfotransferase family 2B member 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr19-726	chr19	50854098	50855098	+	16.6	1000	Intergenic	AluSp|SINE|Alu	-6593	NR_002798	256236	Hs.636624	NR_002798	ENSG00000131401	NAPSB	NAP1L|NAP2|NAPB|NAPSBP	"napsin B aspartic peptidase, pseudogene"	pseudo	16.64	3.4	4.894117647	4.51E-06
chr19-727	chr19	51037106	51038106	+	17.3	1000	"intron (NM_001080457, intron 2 of 2)"	"intron (NM_001080457, intron 2 of 2)"	-19659	NM_001024656	554235	Hs.436338	NM_001024656	ENSG00000204653	ASPDH	-	aspartate dehydrogenase domain containing	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr19-731	chr19	51806988	51807988	+	16	1000	Intergenic	L1MA5A|LINE|L1	-7614	NM_001101372	402665	Hs.546636	NM_001101372	ENSG00000142549	IGLON5	-	IgLON family member 5	protein-coding	16	3.88	4.12371134	7.91E-05
chr19-733	chr19	54290646	54291905	+	17.3	1259	promoter-TSS (NR_039909)	promoter-TSS (NR_039909)	131	NR_029865	442917		NR_029865	ENSG00000199095	MIR372	MIRN372|hsa-mir-372	microRNA 372	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr19-741	chr19	55172680	55173680	+	15.4	1000	Intergenic	AluSx1|SINE|Alu	-1091	NM_001278429	11006	Hs.67846	NM_006847	ENSG00000186818	LILRB4	CD85K|ILT-3|ILT3|LIR-5|LIR5	leukocyte immunoglobulin like receptor B4	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr19-743	chr19	56063195	56064447	+	19.8	1252	Intergenic	FAM|SINE|Alu	-6912	NM_001199824	100130827	Hs.712129	NM_001199824	ENSG00000231274	SBK3	SGK110	SH3 domain binding kinase family member 3	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr19-745	chr19	56257193	56258193	+	16.6	1000	Intergenic	Intergenic	-7925	NM_176820	338321	Hs.661568	NM_176820	ENSG00000185792	NLRP9	CLR19.1|NALP9|NOD6|PAN12	NLR family pyrin domain containing 9	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr19-746	chr19	266289	267289	+	15.4	1000	Intergenic	Intergenic	24380	NM_177543	8612	Hs.465506	NM_003712	ENSG00000141934	PLPP2	LPP2|PAP-2c|PAP2-g|PPAP2C	phospholipid phosphatase 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr19-747	chr19	592294	593294	+	16	1000	"intron (NM_001194, intron 1 of 7)"	"intron (NM_001194, intron 1 of 7)"	2901	NM_001194	610	Hs.124161	NM_001194	ENSG00000099822	HCN2	BCNG-2|BCNG2|HAC-1	hyperpolarization activated cyclic nucleotide gated potassium channel 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr19-749	chr19	916845	918848	+	30.7	2003	"intron (NM_032551, intron 1 of 4)"	CpG	504	NM_032551	84634	Hs.208229	NM_032551	ENSG00000116014	KISS1R	AXOR12|CPPB1|GPR54|HH8|HOT7T175|KISS-1R	KISS1 receptor	protein-coding	30.72	6.8	4.517647059	2.53E-09
chr19-755	chr19	2253040	2254307	+	21.8	1267	"exon (NM_144616, exon 5 of 7)"	"exon (NM_144616, exon 5 of 7)"	2749	NM_144616	126306	Hs.330742	NM_144616	ENSG00000167476	JSRP1	JP-45|JP45	junctional sarcoplasmic reticulum protein 1	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr19-756	chr19	2287886	2288886	+	16	1000	Intergenic	Intergenic	-6205	NM_198532	374872	Hs.511803	NM_198532	ENSG00000188305	C19orf35	-	chromosome 19 open reading frame 35	protein-coding	16	3.88	4.12371134	7.91E-05
chr19-757	chr19	2605624	2606624	+	16	1000	"intron (NM_052847, intron 2 of 4)"	AluJo|SINE|Alu	-24589	NR_107004	102465838		NR_107004	ENSG00000277904	MIR7850	hsa-mir-7850	microRNA 7850	ncRNA	16	2.43	6.58436214	7.90E-07
chr19-761	chr19	3008702	3009702	+	16	1000	"intron (NM_001144761, intron 14 of 19)"	"intron (NM_001144761, intron 14 of 19)"	19963	NM_003260	7089	Hs.332173	NM_003260	ENSG00000065717	TLE2	ESG|ESG2|GRG2	transducin like enhancer of split 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr19-762	chr19	3093103	3094103	+	14.7	1000	promoter-TSS (NM_002067)	promoter-TSS (NM_002067)	-805	NM_002067	2767	Hs.650575	NM_002067	ENSG00000088256	GNA11	FBH|FBH2|FHH2|GNA-11|HHC2|HYPOC2	G protein subunit alpha 11	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr19-764	chr19	3865458	3866712	+	17.9	1254	"intron (NR_027149, intron 1 of 2)"	AluSz|SINE|Alu	2942	NM_001145640	23217	Hs.65750	NM_015174	ENSG00000105278	ZFR2	KIAA1086	zinc finger RNA binding protein 2	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr19-767	chr19	5491778	5492778	+	14.7	1000	Intergenic	MIR3|SINE|MIR	36852	NM_181710	148066	Hs.126496	NM_181710	ENSG00000105428	ZNRF4	RNF204|SPERIZIN|Ssrzf1|spzn	zinc and ring finger 4	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr19-769	chr19	6597745	6599029	+	19.2	1284	Intergenic	Harlequin-int|LTR|ERV1	-7224	NM_001252	970	Hs.501497	NM_001252	ENSG00000125726	CD70	CD27-L|CD27L|CD27LG|TNFSF7|TNLG8A	CD70 molecule	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr19-770	chr19	6608798	6610253	+	21.8	1455	Intergenic	Intergenic	-18362	NM_001252	970	Hs.501497	NM_001252	ENSG00000125726	CD70	CD27-L|CD27L|CD27LG|TNFSF7|TNLG8A	CD70 molecule	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr19-772	chr19	6623749	6624749	+	13.4	1000	Intergenic	AluSg|SINE|Alu	-33086	NM_001252	970	Hs.501497	NM_001252	ENSG00000125726	CD70	CD27-L|CD27L|CD27LG|TNFSF7|TNLG8A	CD70 molecule	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr19-774	chr19	8249384	8250384	+	14.1	1000	Intergenic	AluSx|SINE|Alu	-24333	NM_024552	79603	Hs.515111	NM_024552	ENSG00000090661	CERS4	LASS4|Trh1	ceramide synthase 4	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr19-775	chr19	9147584	9148584	+	14.7	1000	Intergenic	MER39|LTR|ERV1	-55837	NM_001004456	125963	Hs.553577	NM_001004456	ENSG00000170929	OR1M1	OR19-5|OR19-6	olfactory receptor family 1 subfamily M member 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr19-776	chr19	9221125	9222125	+	15.4	1000	Intergenic	L1M4c|LINE|L1	4814	NM_001005192	125962	Hs.553576	NM_001005192	ENSG00000161807	OR7G1	OR19-15|OR19-8|OR7G1P	olfactory receptor family 7 subfamily G member 1	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr19-779	chr19	12944370	12948361	+	75.5	3991	promoter-TSS (NM_001270442)	promoter-TSS (NM_001270442)	-123	NM_031429	83546	Hs.21162	NM_031429	ENSG00000132026	RTBDN	-	retbindin	protein-coding	75.53	10.68	7.072097378	4.50E-30
chr19-783	chr19	13337093	13338093	+	16	1000	"intron (NM_001127221, intron 37 of 46)"	"intron (NM_001127221, intron 37 of 46)"	76311	NM_004907	9592	Hs.501629	NM_004907	ENSG00000160888	IER2	ETR101	immediate early response 2	protein-coding	16	0.49	32.65306122	1.26E-14
chr19-785	chr19	14416918	14418209	+	19.2	1291	"intron (NR_134908, intron 3 of 3)"	MER58B|DNA|hAT-Charlie	-26992	NR_134916	101928845	Hs.531617	NR_134916	ENSG00000267147	LINC01842	-	long intergenic non-protein coding RNA 1842	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr19-786	chr19	15193305	15194305	+	16	1000	Intergenic	AluJo|SINE|Alu	-4072	NM_001004713	126370	Hs.631610	NM_001004713	ENSG00000094661	OR1I1	OR19-20|OR1I1P|OR1I1Q	olfactory receptor family 1 subfamily I member 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr19-788	chr19	15725559	15726559	+	15.4	1000	promoter-TSS (NM_007253)	promoter-TSS (NM_007253)	30	NM_007253	11283	Hs.268554	NM_007253	ENSG00000186526	CYP4F8	CPF8|CYPIVF8	cytochrome P450 family 4 subfamily F member 8	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr19-79	chr19	36450200	36452527	+	41	2327	"non-coding (NR_136525, exon 4 of 5)"	"non-coding (NR_136525, exon 4 of 5)"	13346	NR_136525	105372383	Hs.641592	NR_136525		LOC105372383	-	uncharacterized LOC105372383	ncRNA	40.97	6.8	6.025	3.54E-15
chr19-790	chr19	16373372	16374372	+	16.6	1000	Intergenic	AluSx1|SINE|Alu	-61765	NM_016270	10365	Hs.685136	NM_016270	ENSG00000127528	KLF2	LKLF	Kruppel like factor 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr19-794	chr19	18925666	18926666	+	15.4	1000	Intergenic	AluSp|SINE|Alu	-16578	NM_001297549	5976	Hs.515266	NM_002911	ENSG00000005007	UPF1	HUPF1|NORF1|RENT1|pNORF1|smg-2	"UPF1, RNA helicase and ATPase"	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr19-798	chr19	28748801	28749801	+	14.7	1000	Intergenic	AluY|SINE|Alu	-348294	NR_135636	102724908		NR_135636	ENSG00000266976	LOC102724908	-	uncharacterized LOC102724908	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr19-799	chr19	28790260	28791260	+	16	1000	Intergenic	Intergenic	-306835	NR_135636	102724908		NR_135636	ENSG00000266976	LOC102724908	-	uncharacterized LOC102724908	ncRNA	16	3.88	4.12371134	7.91E-05
chr19-800	chr19	28812888	28814472	+	23	1584	Intergenic	L1M4|LINE|L1	-283915	NR_135636	102724908		NR_135636	ENSG00000266976	LOC102724908	-	uncharacterized LOC102724908	ncRNA	23.04	3.88	5.93814433	4.22E-09
chr19-801	chr19	28930403	28931403	+	14.7	1000	"intron (NR_110759, intron 7 of 9)"	"intron (NR_110759, intron 7 of 9)"	-166692	NR_135636	102724908		NR_135636	ENSG00000266976	LOC102724908	-	uncharacterized LOC102724908	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr19-807	chr19	29408339	29409339	+	14.1	1000	Intergenic	Intergenic	-47199	NR_027318	148145	Hs.112651	NR_027318	ENSG00000267339	LINC00906	-	long intergenic non-protein coding RNA 906	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr19-808	chr19	29610983	29611983	+	15.4	1000	Intergenic	Intergenic	92653	NM_006003	7386	Hs.743307	NM_006003	ENSG00000169021	UQCRFS1	RIP1|RIS1|RISP|UQCR5	"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1"	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr19-809	chr19	29709008	29710008	+	14.1	1000	Intergenic	L2a|LINE|L2	-5372	NM_006003	7386	Hs.743307	NM_006003	ENSG00000169021	UQCRFS1	RIP1|RIS1|RISP|UQCR5	"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1"	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr19-811	chr19	30081749	30082749	+	16	1000	Intergenic	Intergenic	-14921	NM_006627	10775	Hs.412870	NM_006627	ENSG00000105171	POP4	RPP29	"POP4 homolog, ribonuclease P/MRP subunit"	protein-coding	16	1.46	10.95890411	3.44E-09
chr19-813	chr19	30596063	30597063	+	15.4	1000	Intergenic	X7A_LINE|LINE|CR1	163417	NM_003796	8725	Hs.466391	NM_003796	ENSG00000105176	URI1	C19orf2|NNX3|PPP1R19|RMP|URI	"URI1, prefoldin like chaperone"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr19-815	chr19	30728178	30729178	+	16	1000	Intergenic	Intergenic	-134622	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	16	2.91	5.498281787	4.98E-06
chr19-816	chr19	30818454	30819454	+	15.4	1000	Intergenic	MIRb|SINE|MIR	-44346	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr19-818	chr19	31043679	31045049	+	21.8	1370	"intron (NM_014717, intron 4 of 4)"	"intron (NM_014717, intron 4 of 4)"	181064	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr19-819	chr19	31130723	31131723	+	14.7	1000	Intergenic	L1MEg|LINE|L1	267923	NM_014717	9745	Hs.378901	NM_014717	ENSG00000198597	ZNF536	-	zinc finger protein 536	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr19-824	chr19	31844364	31847517	+	47.4	3153	Intergenic	Intergenic	-5509	NM_020856	57616	Hs.278436	NM_020856	ENSG00000121297	TSHZ3	TSH3|ZNF537	teashirt zinc finger homeobox 3	protein-coding	47.37	8.74	5.419908467	6.98E-16
chr19-828	chr19	33315284	33316631	+	19.8	1347	Intergenic	Intergenic	44726	NM_001243036	11136	Hs.743345	NM_014270	ENSG00000021488	SLC7A9	BAT1|CSNU3	solute carrier family 7 member 9	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr19-830	chr19	34104948	34105948	+	15.4	1000	Intergenic	Intergenic	-7413	NM_001127895	64377	Hs.165724	NM_022467	ENSG00000124302	CHST8	GALNAC4ST1|GalNAc4ST|PSS3	carbohydrate sulfotransferase 8	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr19-831	chr19	34189346	34190346	+	16	1000	"intron (NM_001127896, intron 2 of 3)"	"intron (NM_001127896, intron 2 of 3)"	14412	NM_022467	64377	Hs.165724	NM_022467	ENSG00000124302	CHST8	GALNAC4ST1|GalNAc4ST|PSS3	carbohydrate sulfotransferase 8	protein-coding	16	2.43	6.58436214	7.90E-07
chr19-832	chr19	34269781	34270781	+	15.4	1000	Intergenic	Intergenic	-17470	NM_001129994	79047	Hs.221873	NM_024076	ENSG00000153885	KCTD15	-	potassium channel tetramerization domain containing 15	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr19-834	chr19	34424626	34425898	+	21.8	1272	Intergenic	Intergenic	137511	NM_024076	79047	Hs.221873	NM_024076	ENSG00000153885	KCTD15	-	potassium channel tetramerization domain containing 15	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr19-836	chr19	34546562	34547562	+	16	1000	Intergenic	Intergenic	-116290	NM_015578	26065	Hs.744009	NM_015578	ENSG00000257103	LSM14A	C19orf13|FAM61A|RAP55|RAP55A	"LSM14A, mRNA processing body assembly factor"	protein-coding	16	3.88	4.12371134	7.91E-05
chr19-841	chr19	35772815	35774578	+	25	1763	"intron (NM_021175, intron 1 of 2)"	"intron (NM_021175, intron 1 of 2)"	447	NM_021175	57817	Hs.8821	NM_021175	ENSG00000105697	HAMP	HEPC|HFE2B|LEAP1|PLTR	hepcidin antimicrobial peptide	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr19-855	chr19	41962863	41963863	+	16	1000	"intron (NR_136334, intron 2 of 2)"	MER21-int|LTR|ERVL	14300	NM_001130514	100170765	Hs.649452	NM_001130514	ENSG00000204978	ERICH4	C19orf69	glutamate rich 4	protein-coding	16	3.4	4.705882353	2.25E-05
chr19-858	chr19	42078918	42079918	+	15.4	1000	"intron (NM_001288773, intron 2 of 7)"	"intron (NM_001288773, intron 2 of 7)"	-3113	NM_001098506	90273	Hs.655885	NM_033543	ENSG00000007129	CEACAM21	CEACAM3|R29124_1	carcinoembryonic antigen related cell adhesion molecule 21	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr19-861	chr19	42263357	42264710	+	17.9	1353	"intron (NM_002483, intron 2 of 5)"	L1MA10|LINE|L1	4605	NM_002483	4680	Hs.466814	NM_002483	ENSG00000086548	CEACAM6	CD66c|CEAL|NCA	carcinoembryonic antigen related cell adhesion molecule 6	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr19-863	chr19	42353170	42359584	+	105	6414	TTS (NM_001040283)	TTS (NM_001040283)	7291	NM_001040283	63946	Hs.350507	NM_033052	ENSG00000142025	DMRTC2	-	DMRT like family C2	protein-coding	104.97	22.81	4.601928979	1.83E-28
chr19-864	chr19	42361499	42362499	+	16	1000	Intergenic	MIRb|SINE|MIR	-1989	NM_001022	6223	Hs.438429	NM_001022	ENSG00000105372	RPS19	DBA|DBA1|S19	ribosomal protein S19	protein-coding	16	1.94	8.24742268	7.67E-08
chr19-866	chr19	43117534	43118534	+	15.4	1000	"intron (NR_073180, intron 2 of 2)"	MER50|LTR|ERV1	-18952	NM_001816	1088	Hs.41	NM_001816	ENSG00000124469	CEACAM8	CD66b|CD67|CGM6|NCA-95	carcinoembryonic antigen related cell adhesion molecule 8	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr19-868	chr19	45974633	45976485	+	31.4	1852	"intron (NM_006732, intron 3 of 3)"	"intron (NM_006732, intron 3 of 3)"	4306	NM_006732	2354	Hs.590958	NM_006732	ENSG00000125740	FOSB	AP-1|G0S3|GOS3|GOSB	"FosB proto-oncogene, AP-1 transcription factor subunit"	protein-coding	31.36	4.37	7.176201373	3.82E-13
chr19-869	chr19	45978972	45979972	+	14.1	1000	Intergenic	Intergenic	8219	NM_006732	2354	Hs.590958	NM_006732	ENSG00000125740	FOSB	AP-1|G0S3|GOS3|GOSB	"FosB proto-oncogene, AP-1 transcription factor subunit"	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr19-873	chr19	46548006	46549006	+	15.4	1000	Intergenic	AluSg|SINE|Alu	-4232	NM_001002923	444882	Hs.531310	NM_001002923	ENSG00000204869	IGFL4	-	IGF like family member 4	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr19-874	chr19	46579525	46580525	+	15.4	1000	"intron (NR_125344, intron 1 of 1)"	"intron (NR_125344, intron 1 of 1)"	862	NR_125344	400706	Hs.630811	NR_125344	ENSG00000204869	LOC400706	-	uncharacterized LOC400706	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr19-880	chr19	46984773	46986093	+	22.4	1320	"intron (NM_001205281, intron 3 of 3)"	"intron (NM_001205281, intron 3 of 3)"	-10613	NM_001103149	55228	Hs.8395	NM_018215	ENSG00000182013	PNMAL1	-	paraneoplastic Ma antigen family like 1	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr19-881	chr19	47161283	47163538	+	32.6	2255	"intron (NM_145056, intron 1 of 3)"	"intron (NM_145056, intron 1 of 3)"	-1211	NR_040042	100506068	Hs.434327	NR_040041	ENSG00000245598	DACT3-AS1	-	DACT3 antisense RNA 1	ncRNA	32.64	4.85	6.729896907	5.03E-13
chr19-887	chr19	48480555	48481555	+	15.4	1000	"intron (NM_001128326, intron 3 of 5)"	"intron (NM_001128326, intron 3 of 5)"	14372	NM_001128326	100131137	Hs.651072	NM_001128326	ENSG00000188334	BSPH1	BSP1|ELSPBP2	binder of sperm protein homolog 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr19-894	chr19	50810252	50812067	+	33.3	1815	"intron (NM_001077186, intron 40 of 41)"	L2a|LINE|L2	21475	NM_004977	3748	Hs.467146	NM_004977	ENSG00000131398	KCNC3	KSHIIID|KV3.3|SCA13	potassium voltage-gated channel subfamily C member 3	protein-coding	33.28	5.82	5.718213058	4.04E-12
chr19-896	chr19	51372586	51373951	+	23	1365	Intergenic	Intergenic	-3421	NR_045762	3817	Hs.515560	NM_005551	ENSG00000167751	KLK2	KLK2A2|hGK-1|hK2	kallikrein related peptidase 2	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr19-897	chr19	51423294	51424294	+	14.7	1000	Intergenic	Intergenic	-9800	NM_001302961	9622	Hs.218366	NM_004917	ENSG00000167749	KLK4	AI2A1|ARM1|EMSP|EMSP1|KLK-L1|PRSS17|PSTS|kallikrein	kallikrein related peptidase 4	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr19-898	chr19	51692480	51693480	+	14.1	1000	Intergenic	MER96B|DNA|hAT	-7758	NR_110732	101928517	Hs.707693	NR_110732	ENSG00000269072	LOC101928517	-	uncharacterized LOC101928517	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr19-901	chr19	52025643	52026643	+	14.1	1000	"intron (NM_001177549, intron 5 of 5)"	AluJb|SINE|Alu	8967	NM_001245	946	Hs.720304	NM_001245	ENSG00000105492	SIGLEC6	CD327|CD33L|CD33L1|CD33L2|CDW327|OBBP1	sialic acid binding Ig like lectin 6	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr19-903	chr19	52191014	52192014	+	15.4	1000	"non-coding (NR_108100, exon 2 of 2)"	"non-coding (NR_108100, exon 2 of 2)"	-1173	NM_001316994	147650	Hs.467174	NM_207324	ENSG00000182310	SPACA6	LET7EH|LINC00085|NCRNA00085|SPACA6P	sperm acrosome associated 6	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr19-904	chr19	52253272	52254272	+	16	1000	"intron (NM_001193306, intron 1 of 2)"	"intron (NM_001193306, intron 1 of 2)"	1378	NM_001193306	2357	Hs.753	NM_002029	ENSG00000171051	FPR1	FMLP|FPR	formyl peptide receptor 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr19-907	chr19	54332329	54333329	+	16	1000	Intergenic	MIRc|SINE|MIR	-5172	NM_001277129	91662	Hs.631573	NM_033297	ENSG00000142405	NLRP12	CLR19.3|FCAS2|NALP12|PAN6|PYPAF7|RNO|RNO2	NLR family pyrin domain containing 12	protein-coding	16	1.94	8.24742268	7.67E-08
chr19-91	chr19	41105691	41108143	+	51.8	2452	promoter-TSS (NM_001042545)	promoter-TSS (NM_001042545)	-360	NM_001042545	8425	Hs.466766	NM_003573	ENSG00000090006	LTBP4	ARCL1C|LTBP-4|LTBP4L|LTBP4S	latent transforming growth factor beta binding protein 4	protein-coding	51.85	6.8	7.625	6.93E-22
chr19-912	chr19	55108064	55109696	+	23	1632	"intron (NR_103502, intron 6 of 6)"	"intron (NR_103502, intron 6 of 6)"	3218	NM_001278319	11024	Hs.710507	NM_006863	ENSG00000104974	LILRA1	CD85I|LIR-6|LIR6	leukocyte immunoglobulin like receptor A1	protein-coding	23.04	0.97	23.75257732	5.03E-19
chr19-916	chr19	55145362	55147839	+	32	2477	TTS (NM_001278399)	TTS (NM_001278399)	4632	NM_001081637	10859	Hs.667388	NM_006669	ENSG00000104972	LILRB1	CD85J|ILT-2|ILT2|LIR-1|LIR1|MIR-7|MIR7|PIR-B|PIRB	leukocyte immunoglobulin like receptor B1	protein-coding	32	1.94	16.49484536	5.00E-22
chr19-923	chr19	1287443	1290928	+	40.3	3485	"intron (NM_001405, intron 1 of 3)"	"intron (NM_001405, intron 1 of 3)"	3032	NM_001405	1943	Hs.741510	NM_001405	ENSG00000099617	EFNA2	ELF-1|EPLG6|HEK7-L|LERK-6|LERK6	ephrin A2	protein-coding	40.33	5.82	6.929553265	3.74E-16
chr19-925	chr19	1747800	1752831	+	63.4	5031	Intergenic	Intergenic	-3347	NM_001080488	390874	Hs.654347	NM_001080488	ENSG00000205922	ONECUT3	OC3	one cut homeobox 3	protein-coding	63.37	12.62	5.021394612	5.31E-19
chr19-928	chr19	2512242	2513884	+	27.5	1642	"3' UTR (NM_052847, exon 5 of 5)"	"3' UTR (NM_052847, exon 5 of 5)"	36940	NM_015675	4616	Hs.110571	NM_015675	ENSG00000099860	GADD45B	GADD45BETA|MYD118	growth arrest and DNA damage inducible beta	protein-coding	27.52	1.94	14.18556701	2.90E-17
chr19-933	chr19	2662143	2663625	+	24.3	1482	"intron (NM_052847, intron 1 of 4)"	MER21B|LTR|ERVL	32171	NR_107004	102465838		NR_107004	ENSG00000277904	MIR7850	hsa-mir-7850	microRNA 7850	ncRNA	24.32	2.91	8.357388316	5.77E-12
chr19-935	chr19	2674550	2675550	+	15.4	1000	"intron (NM_052847, intron 1 of 4)"	"intron (NM_052847, intron 1 of 4)"	27696	NM_052847	2788	Hs.515544	NM_052847	ENSG00000176533	GNG7	-	G protein subunit gamma 7	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr19-936	chr19	2699787	2700787	+	15.4	1000	"intron (NM_052847, intron 1 of 4)"	AluSx|SINE|Alu	2459	NM_052847	2788	Hs.515544	NM_052847	ENSG00000176533	GNG7	-	G protein subunit gamma 7	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr19-939	chr19	2991445	2992445	+	15.4	1000	"exon (NM_001143986, exon 14 of 17)"	"exon (NM_001143986, exon 14 of 17)"	14409	NM_001143986	79816	Hs.334507	NM_024760	ENSG00000104953	TLE6	GRG6|PREMBL	transducin like enhancer of split 6	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr19-941	chr19	3708605	3709866	+	19.8	1261	"intron (NM_001267560, intron 1 of 20)"	AluSq|SINE|Alu	900	NM_001267560	27134	Hs.25527	NM_014428	ENSG00000105289	TJP3	ZO-3|ZO3	tight junction protein 3	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr19-942	chr19	3931261	3932261	+	15.4	1000	"intron (NR_031672, intron 2 of 2)"	MER31A|LTR|ERV1	-1340	NM_001289117	27231	Hs.135458	NM_014446	ENSG00000077009	NMRK2	ITGB1BP3|MIBP|NRK2	nicotinamide riboside kinase 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr19-943	chr19	4277474	4278474	+	14.7	1000	promoter-TSS (NM_020209)	promoter-TSS (NM_020209)	-624	NM_020209	56961	Hs.7423	NM_020209	ENSG00000105251	SHD	-	Src homology 2 domain containing transforming protein D	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr19-944	chr19	5849426	5850426	+	15.4	1000	"intron (NR_110740, intron 1 of 3)"	LTR7B|LTR|ERV1	1559	NM_000149	2525	Hs.169238	NM_000149	ENSG00000171124	FUT3	CD174|FT3B|FucT-III|LE|Les	fucosyltransferase 3 (Lewis blood group)	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr19-945	chr19	6178370	6179370	+	15.4	1000	"intron (NM_001321384, intron 8 of 14)"	LTR16A1|LTR|ERVL	43226	NM_001289177	81616	Hs.465720	NM_030924	ENSG00000130377	ACSBG2	BGR|BRGL|PRTD-NY3|PRTDNY3	acyl-CoA synthetase bubblegum family member 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr19-955	chr19	10046088	10047088	+	14.7	1000	"intron (NM_058164, intron 1 of 5)"	"intron (NM_058164, intron 1 of 5)"	640	NM_058164	93145	Hs.169743	NM_058164	ENSG00000105088	OLFM2	NOE2|NOELIN2|NOELIN2_V1|OlfC	olfactomedin 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr19-956	chr19	10091318	10092318	+	15.4	1000	"intron (NM_015719, intron 32 of 66)"	"intron (NM_015719, intron 32 of 66)"	29329	NM_015719	50509	Hs.235368	NM_015719	ENSG00000080573	COL5A3	-	collagen type V alpha 3 chain	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr19-958	chr19	10143766	10144766	+	14.1	1000	Intergenic	LTR7C|LTR|ERV1	-4764	NR_049855	100847093		NR_049855	ENSG00000266204	MIR5589	-	microRNA 5589	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr19-959	chr19	11394420	11395420	+	15.4	1000	Intergenic	AluSz6|SINE|Alu	-11895	NM_001282509	26526	Hs.579784	NM_012466	ENSG00000130167	TSPAN16	TM-8|TM4-B|TM4SF16	tetraspanin 16	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr19-966	chr19	13671745	13672745	+	15.4	1000	Intergenic	THE1B|LTR|ERVL-MaLR	-54971	NM_023035	773	Hs.501632	NM_000068	ENSG00000141837	CACNA1A	APCA|BI|CACNL1A4|CAV2.1|EA2|EIEE42|FHM|HPCA|MHP|MHP1|SCA6	calcium voltage-gated channel subunit alpha1 A	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr19-967	chr19	13737991	13738991	+	15.4	1000	Intergenic	Intergenic	-104083	NM_001320565	81576	Hs.24998	NM_030818	ENSG00000104957	CCDC130	-	coiled-coil domain containing 130	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr19-969	chr19	13975104	13976104	+	15.4	1000	Intergenic	Intergenic	-9909	NR_029613	406957		NR_029613	ENSG00000207613	MIR181C	MIRN181C|mir-181c	microRNA 181c	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr19-970	chr19	14942060	14943060	+	14.1	1000	Intergenic	Intergenic	-3284	NM_017506	26659	Hs.137573	NM_017506	ENSG00000188269	OR7A5	HTPCR2	olfactory receptor family 7 subfamily A member 5	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr19-971	chr19	15149402	15150402	+	15.4	1000	Intergenic	AluSx4|SINE|Alu	-10389	NM_012114	23581	Hs.466057	NM_012114	ENSG00000105141	CASP14	-	caspase 14	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr19-976	chr19	15618658	15619658	+	15.4	1000	promoter-TSS (NM_173483)	promoter-TSS (NM_173483)	-178	NM_173483	126410	Hs.156452	NM_173483	ENSG00000171954	CYP4F22	ARCI5|INLNE|LI3	cytochrome P450 family 4 subfamily F member 22	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr19-981	chr19	17712664	17715233	+	35.2	2569	"3' UTR (NM_001080421, exon 42 of 42)"	"3' UTR (NM_001080421, exon 42 of 42)"	47545	NM_024656	79709	Hs.418795	NM_024656	ENSG00000130309	COLGALT1	GLT25D1	collagen beta(1-O)galactosyltransferase 1	protein-coding	35.2	5.82	6.048109966	6.75E-13
chr19-985	chr19	18440959	18441959	+	14.7	1000	Intergenic	Intergenic	-7458	NM_001252129	25804	Hs.515255	NM_012321	ENSG00000130520	LSM4	GRP|YER112W	"LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr19-989	chr19	23598239	23599239	+	15.4	1000	"non-coding (NR_126448, exon 1 of 6)"	"non-coding (NR_126448, exon 1 of 6)"	137	NR_126449	104472717	Hs.162105	NR_126448	ENSG00000269416	LINC01224	-	long intergenic non-protein coding RNA 1224	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr19-991	chr19	28618387	28619387	+	15.4	1000	Intergenic	Intergenic	-334039	NR_027301	148189	Hs.706547	NR_027301	ENSG00000261824	LINC00662	-	long intergenic non-protein coding RNA 662	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr19-998	chr19	30023081	30024081	+	14.7	1000	"intron (NM_001146339, intron 4 of 4)"	MIRc|SINE|MIR	6090	NM_001146339	342865	Hs.451618	NM_001146339	ENSG00000187135	VSTM2B	-	V-set and transmembrane domain containing 2B	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr19-999	chr19	30232854	30234317	+	21.8	1463	Intergenic	Intergenic	-26889	NM_001256047	83636	Hs.529094	NM_031448	ENSG00000131943	C19orf12	MPAN|NBIA3|NBIA4|SPG43	chromosome 19 open reading frame 12	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr2-1000	chr2	235757924	235759186	+	21.1	1262	Intergenic	Intergenic	-102073	NM_014521	23677	Hs.516777	NM_014521	ENSG00000130147	SH3BP4	BOG25|TTP	SH3 domain binding protein 4	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr2-1008	chr2	236603144	236604144	+	18.6	1000	"intron (NM_001037131, intron 1 of 17)"	"intron (NM_001037131, intron 1 of 17)"	189249	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr2-1010	chr2	236644188	236645188	+	18.6	1000	"intron (NM_001037131, intron 3 of 17)"	"intron (NM_001037131, intron 3 of 17)"	230293	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	18.56	4.37	4.247139588	1.41E-05
chr2-1011	chr2	236656532	236660382	+	62.1	3850	"intron (NM_001037131, intron 5 of 17)"	L2a|LINE|L2	244062	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	62.09	8.74	7.104118993	1.11E-24
chr2-1014	chr2	237704073	237705073	+	18.6	1000	Intergenic	Intergenic	226193	NM_020311	57007	Hs.471751	NM_020311	ENSG00000144476	ACKR3	CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1	atypical chemokine receptor 3	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr2-1021	chr2	922009	923626	+	26.2	1617	Intergenic	MER5A|DNA|hAT-Charlie	-21680	NR_110179	101060385	Hs.385965	NR_110179	ENSG00000228799	LINC01939	-	long intergenic non-protein coding RNA 1939	ncRNA	26.24	1.94	13.5257732	4.03E-16
chr2-1022	chr2	1500501	1501501	+	18.6	1000	"intron (NM_175721, intron 12 of 14)"	"intron (NM_175721, intron 12 of 14)"	82821	NM_175721	7173	Hs.467554	NM_000547	ENSG00000115705	TPO	MSA|TDH2A|TPX	thyroid peroxidase	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr2-1023	chr2	1578190	1579750	+	27.5	1560	Intergenic	Intergenic	160790	NM_175721	7173	Hs.467554	NM_000547	ENSG00000115705	TPO	MSA|TDH2A|TPX	thyroid peroxidase	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr2-1027	chr2	1905106	1906393	+	19.8	1287	"intron (NM_001329845, intron 14 of 24)"	"intron (NM_001329845, intron 14 of 24)"	-157430	NM_012293	7837	Hs.332197	NM_012293	ENSG00000130508	PXDN	COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO	peroxidasin	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr2-103	chr2	238173037	238174321	+	27.5	1284	Intergenic	Intergenic	149171	NM_057167	1293	Hs.233240	NM_004369	ENSG00000163359	COL6A3	BTHLM1|DYT27|UCMD1	collagen type VI alpha 3 chain	protein-coding	27.52	5.82	4.728522337	1.71E-08
chr2-1030	chr2	2542287	2543548	+	20.5	1261	Intergenic	Tigger9b|DNA|TcMar-Tigger	-207832	NM_015025	23040	Hs.434418	NM_015025	ENSG00000186487	MYT1L	MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L	myelin transcription factor 1 like	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr2-1031	chr2	2912408	2913661	+	19.2	1253	"intron (NR_110228, intron 5 of 6)"	"intron (NR_110228, intron 5 of 6)"	216764	NR_110228	101927554	Hs.638446	NR_110228	ENSG00000234423	LINC01250	-	long intergenic non-protein coding RNA 1250	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr2-1032	chr2	3814283	3815283	+	17.9	1000	"intron (NM_001287444, intron 6 of 10)"	"intron (NM_001287444, intron 6 of 10)"	63601	NM_001287444	728597	Hs.304233	NM_001287444	ENSG00000214866	DCDC2C	-	doublecortin domain containing 2C	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr2-1033	chr2	6903874	6904874	+	17.9	1000	"intron (NR_038369, intron 1 of 5)"	MLT1K|LTR|ERVL-MaLR	6068	NR_038369	400941	Hs.446195	NM_001001695	ENSG00000205837	LINC00487	-	long intergenic non-protein coding RNA 487	ncRNA	17.92	3.4	5.270588235	8.42E-07
chr2-1034	chr2	7406294	7407551	+	19.8	1257	Intergenic	Intergenic	-154470	NR_038432	100506274	Hs.177930	NR_038432	ENSG00000229727	LOC100506274	-	uncharacterized LOC100506274	ncRNA	19.84	3.88	5.113402062	7.67E-07
chr2-1038	chr2	9508725	9510053	+	18.6	1328	"intron (NM_001135191, intron 16 of 26)"	AluSq|SINE|Alu	53400	NR_134951	9270	Hs.467662	NM_004763	ENSG00000119185	ITGB1BP1	ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B	integrin subunit beta 1 binding protein 1	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr2-1040	chr2	9926029	9927029	+	17.9	1000	Intergenic	AluJo|SINE|Alu	-57042	NM_001318977	9014	Hs.584833	NM_005680	ENSG00000115750	TAF1B	MGC:9349|RAF1B|RAFI63|SL1|TAFI63	"TATA-box binding protein associated factor, RNA polymerase I subunit B"	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr2-1041	chr2	10217389	10221540	+	73	4151	"intron (NM_001037160, intron 1 of 2)"	"intron (NM_001037160, intron 1 of 2)"	1074	NM_001037160	192668	Hs.27092	NM_001037160	ENSG00000205795	CYS1	-	cystin 1	protein-coding	72.97	10.19	7.1609421	2.28E-29
chr2-1044	chr2	11184183	11185183	+	17.9	1000	Intergenic	MSTA|LTR|ERVL-MaLR	87619	NR_040080	285150	Hs.329841	NM_182586	ENSG00000145063	FLJ33534	-	uncharacterized LOC285150	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr2-1049	chr2	12644212	12645212	+	18.6	1000	"intron (NR_110196, intron 4 of 5)"	MIRb|SINE|MIR	-212286	NR_027303	28951	Hs.467751	NM_021643	ENSG00000071575	TRIB2	C5FW|GS3955|TRB2	tribbles pseudokinase 2	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr2-1054	chr2	15943164	15944164	+	17.9	1000	Intergenic	MIRb|SINE|MIR	112758	NR_110201	101926966	Hs.502835	NR_110201	ENSG00000231031	LINC01804	-	long intergenic non-protein coding RNA 1804	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr2-1058	chr2	23679695	23680695	+	18.6	1000	"intron (NM_052920, intron 1 of 13)"	"intron (NM_052920, intron 1 of 13)"	71897	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr2-1061	chr2	23789403	23791301	+	34.6	1898	"intron (NM_052920, intron 3 of 13)"	"intron (NM_052920, intron 3 of 13)"	182054	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	34.56	7.77	4.447876448	3.74E-10
chr2-1063	chr2	25277104	25278104	+	17.3	1000	"intron (NM_001319099, intron 1 of 22)"	"intron (NM_001319099, intron 1 of 22)"	12272	NM_001319099	22979	Hs.4892	NM_014971	ENSG00000084710	EFR3B	KIAA0953	EFR3 homolog B	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr2-1064	chr2	26396123	26397654	+	26.2	1531	"intron (NM_001168241, intron 1 of 5)"	CpG	928	NM_001168241	150946	Hs.187912	NM_001168241	ENSG00000157833	GAREM2	FAM59B|GAREML	GRB2 associated regulator of MAPK1 subtype 2	protein-coding	26.24	1.94	13.5257732	4.03E-16
chr2-1067	chr2	27066085	27067085	+	17.3	1000	Intergenic	Intergenic	-4384	NM_020134	56896	Hs.299315	NM_020134	ENSG00000157851	DPYSL5	CRAM|CRMP-5|CRMP5|Ulip6	dihydropyrimidinase like 5	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr2-1069	chr2	28857007	28858301	+	24.3	1294	"intron (NR_138141, intron 34 of 35)"	AluJb|SINE|Alu	68430	NR_138141	151056	Hs.444933	NM_153021	ENSG00000163803	PLB1	PLB|PLB/LIP	phospholipase B1	protein-coding	24.32	2.91	8.357388316	5.77E-12
chr2-1072	chr2	29759777	29760777	+	17.3	1000	"intron (NM_004304, intron 3 of 28)"	MSTB-int|LTR|ERVL-MaLR	-62034	NR_136317	105374389	Hs.196534	NR_136317		LOC105374389	-	uncharacterized LOC105374389	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr2-1073	chr2	30190852	30192107	+	19.2	1255	Intergenic	Intergenic	-47002	NM_004304	238	Hs.654469	NM_004304	ENSG00000171094	ALK	CD246|NBLST3	anaplastic lymphoma receptor tyrosine kinase	protein-coding	19.2	0	19.77825696	2.52E-19
chr2-1078	chr2	38249557	38251151	+	27.5	1594	"intron (NM_144713, intron 10 of 10)"	MIR|SINE|MIR	13130	NR_102712	101410544	Hs.591566	NR_102712		RMDN2-AS1	-	RMDN2 antisense RNA 1	ncRNA	27.52	2.91	9.457044674	7.03E-14
chr2-1086	chr2	45321913	45323254	+	24.3	1341	Intergenic	Intergenic	-86041	NM_016932	10736	Hs.101937	NM_016932	ENSG00000170577	SIX2	-	SIX homeobox 2	protein-coding	24.32	4.37	5.565217391	4.38E-09
chr2-1089	chr2	45872144	45873409	+	22.4	1265	Intergenic	Intergenic	-6267	NM_005400	5581	Hs.580351	NM_005400	ENSG00000171132	PRKCE	PKCE|nPKC-epsilon	protein kinase C epsilon	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr2-1094	chr2	61085954	61086954	+	17.9	1000	"intron (NR_033980, intron 1 of 2)"	"intron (NR_033980, intron 1 of 2)"	21995	NR_033980	400957	Hs.170358	NR_033980	ENSG00000228414	LINC01185	-	long intergenic non-protein coding RNA 1185	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr2-1097	chr2	64705114	64706114	+	18.6	1000	Intergenic	Intergenic	24287	NM_014181	29094	Hs.372208	NM_014181	ENSG00000119862	LGALSL	GRP|HSPC159	galectin like	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr2-1099	chr2	66809997	66810997	+	17.9	1000	"intron (NR_110156, intron 1 of 5)"	"intron (NR_110156, intron 1 of 5)"	9335	NR_110156	100507073	Hs.667940	NR_110156	ENSG00000232046	LINC01798	-	long intergenic non-protein coding RNA 1798	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr2-1107	chr2	73307450	73308738	+	21.8	1288	"intron (NM_015470, intron 3 of 4)"	"intron (NM_015470, intron 3 of 4)"	-9129	NM_001330400	94097	Hs.368171	NM_144579	ENSG00000144040	SFXN5	BBG-TCC	sideroflexin 5	protein-coding	21.76	0.97	22.43298969	1.19E-17
chr2-1108	chr2	73314658	73315913	+	23.7	1255	"exon (NM_015470, exon 3 of 5)"	"exon (NM_015470, exon 3 of 5)"	-16320	NM_001330400	94097	Hs.368171	NM_144579	ENSG00000144040	SFXN5	BBG-TCC	sideroflexin 5	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr2-1110	chr2	73423081	73424786	+	30.1	1705	Intergenic	AluSq2|SINE|Alu	-5453	NM_001134462	344022	Hs.694384	NM_001134462	ENSG00000214513	NOTO	-	notochord homeobox	protein-coding	30.08	6.31	4.76703645	3.01E-09
chr2-1116	chr2	84744124	84745124	+	17.3	1000	"intron (NM_001370, intron 1 of 76)"	"intron (NM_001370, intron 1 of 76)"	1045	NM_001370	1768	Hs.249972	NM_001370	ENSG00000115423	DNAH6	DNHL1|Dnahc6|HL-2|HL2	dynein axonemal heavy chain 6	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr2-1122	chr2	86571256	86572659	+	22.4	1403	Intergenic	Intergenic	-6751	NM_001164730	65055	Hs.368884	NM_022912	ENSG00000068615	REEP1	C2orf23|HMN5B|SPG31|Yip2a	receptor accessory protein 1	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr2-1123	chr2	88746918	88747918	+	17.3	1000	TTS (NM_001135649)	TTS (NM_001135649)	4635	NM_001135649	344167	Hs.716722	NM_001135649	ENSG00000214336	FOXI3	-	forkhead box I3	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr2-1133	chr2	99552801	99553801	+	17.9	1000	promoter-TSS (NM_207362)	promoter-TSS (NM_207362)	-617	NM_207362	343990	Hs.469398	NM_207362	ENSG00000196872	KIAA1211L	C2orf55	KIAA1211 like	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr2-1134	chr2	101408764	101412042	+	39.7	3278	Intergenic	Intergenic	-26210	NM_002518	4862	Hs.156832	NM_002518	ENSG00000170485	NPAS2	MOP4|PASD4|bHLHe9	neuronal PAS domain protein 2	protein-coding	39.69	5.82	6.819587629	3.74E-16
chr2-1135	chr2	101423636	101424942	+	17.3	1306	Intergenic	Intergenic	-12324	NM_002518	4862	Hs.156832	NM_002518	ENSG00000170485	NPAS2	MOP4|PASD4|bHLHe9	neuronal PAS domain protein 2	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr2-1136	chr2	101452201	101453201	+	18.6	1000	"intron (NM_002518, intron 1 of 20)"	"intron (NM_002518, intron 1 of 20)"	16088	NM_002518	4862	Hs.156832	NM_002518	ENSG00000170485	NPAS2	MOP4|PASD4|bHLHe9	neuronal PAS domain protein 2	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr2-1138	chr2	101589660	101590924	+	21.1	1264	"intron (NR_110213, intron 2 of 2)"	"intron (NR_110213, intron 2 of 2)"	3331	NR_110213	101927142	Hs.656556	NR_110213		LOC101927142	-	uncharacterized LOC101927142	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr2-1140	chr2	101812173	101813429	+	19.2	1256	Intergenic	Intergenic	44679	NR_135594	100506286	Hs.679790	NR_135594	ENSG00000272902	TBC1D8-AS1	-	TBC1 domain family member 8 antisense RNA 1	ncRNA	19.2	4.37	4.393592677	3.16E-06
chr2-1143	chr2	104408861	104409861	+	16.6	1000	Intergenic	Intergenic	615429	NR_037885	100287010	Hs.694603	NR_037885		LOC100287010	-	uncharacterized LOC100287010	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr2-1145	chr2	109893453	109894453	+	17.9	1000	"intron (NM_001099289, intron 1 of 9)"	"intron (NM_001099289, intron 1 of 9)"	36128	NR_036224	100423027		NR_036224	ENSG00000265965	MIR4266	-	microRNA 4266	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr2-1146	chr2	110424196	110425196	+	17.3	1000	Intergenic	Intergenic	52785	NM_023016	65124	Hs.355455	NM_023016	ENSG00000198142	SOWAHC	ANKRD57|C2orf26	sosondowah ankyrin repeat domain family member C	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr2-1151	chr2	119968257	119969257	+	17.3	1000	Intergenic	LTR48|LTR|ERV1	-12627	NM_001008410	55240	Hs.647822	NM_018234	ENSG00000115107	STEAP3	AHMIO2|STMP3|TSAP6|dudlin-2|dudulin-2|pHyde	STEAP3 metalloreductase	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr2-1152	chr2	121004981	121005981	+	17.3	1000	Intergenic	Intergenic	-4933	NM_002881	5899	Hs.469820	NM_002881	ENSG00000144118	RALB	-	RAS like proto-oncogene B	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr2-1154	chr2	127409317	127410597	+	23.7	1280	Intergenic	MLT2A1|LTR|ERVL	-3554	NM_001256584	2995	Hs.59138	NM_002101	ENSG00000136732	GYPC	CD236|CD236R|GE|GPC|GPD|GYPD|PAS-2|PAS-2'	glycophorin C (Gerbich blood group)	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr2-1156	chr2	127900381	127901653	+	20.5	1272	Intergenic	Intergenic	-36114	NM_139344	274	Hs.193163	NM_004305	ENSG00000136717	BIN1	AMPH2|AMPHL|SH3P9	bridging integrator 1	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr2-1159	chr2	129739920	129742605	+	40.3	2685	Intergenic	Intergenic	119088	NR_110278	101927881	Hs.570247	NR_110278		LOC101927881	-	uncharacterized LOC101927881	ncRNA	40.33	6.8	5.930882353	2.14E-14
chr2-1160	chr2	130647145	130648145	+	17.9	1000	Intergenic	MLT1A-int|LTR|ERVL-MaLR	-33105	NR_110285	101927924	Hs.570248	NR_110285	ENSG00000237574	LINC01856	-	long intergenic non-protein coding RNA 1856	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr2-1162	chr2	131763993	131764993	+	18.6	1000	"intron (NM_015320, intron 4 of 13)"	"intron (NM_015320, intron 4 of 13)"	86038	NM_001321748	130074	Hs.534679	NM_001009993	ENSG00000152102	FAM168B	MANI	family with sequence similarity 168 member B	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr2-1166	chr2	135554025	135555025	+	17.3	1000	Intergenic	MIR3|SINE|MIR	-41661	NM_138326	130013	Hs.655728	NM_138326	ENSG00000153086	ACMSD	-	aminocarboxymuconate semialdehyde decarboxylase	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr2-1170	chr2	146020673	146021935	+	18.6	1262	Intergenic	Intergenic	595770	NR_033870	401014	Hs.742290	NR_033870	ENSG00000226674	TEX41	DKFZp686O1327|LINC00953	testis expressed 41 (non-protein coding)	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr2-1171	chr2	159049523	159050523	+	16.6	1000	"intron (NM_138803, intron 11 of 13)"	"intron (NM_138803, intron 11 of 13)"	26861	NR_038850	554201	Hs.570262	NR_038850	ENSG00000227480	CCDC148-AS1	-	CCDC148 antisense RNA 1	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr2-1172	chr2	169205493	169206785	+	20.5	1292	Intergenic	Intergenic	-102034	NM_013233	27347	Hs.276271	NM_013233	ENSG00000198648	STK39	DCHT|PASK|SPAK	serine/threonine kinase 39	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr2-1174	chr2	171220026	171221026	+	18.6	1000	"intron (NM_001083615, intron 8 of 33)"	"intron (NM_001083615, intron 8 of 33)"	-13073	NR_110576	101929753	Hs.534101	NR_110576		LOC101929753	-	uncharacterized LOC101929753	ncRNA	18.56	2.43	7.637860082	1.53E-08
chr2-1176	chr2	171254816	171256067	+	22.4	1251	"intron (NM_001083615, intron 16 of 33)"	MER8|DNA|TcMar-Tigger	-47988	NR_110576	101929753	Hs.534101	NR_110576		LOC101929753	-	uncharacterized LOC101929753	ncRNA	22.4	4.37	5.125858124	1.32E-07
chr2-1178	chr2	171663955	171665363	+	19.2	1408	Intergenic	Intergenic	-8541	NM_000817	2571	Hs.420036	NM_000817	ENSG00000128683	GAD1	CPSQ1|GAD|SCP	glutamate decarboxylase 1	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr2-1183	chr2	175569278	175570278	+	17.9	1000	Intergenic	Intergenic	-22151	NM_001077269	7456	Hs.128067	NM_003387	ENSG00000115935	WIPF1	PRPL-2|WAS2|WASPIP|WIP	WAS/WASL interacting protein family member 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr2-1192	chr2	177010941	177014244	+	54.4	3303	Intergenic	CpG	-2439	NR_029609	406903		NR_029609	ENSG00000207744	MIR10B	MIRN10B|hsa-mir-10b|miRNA10B|mir-10b	microRNA 10b	ncRNA	54.41	9.71	5.603501545	3.95E-18
chr2-1194	chr2	177469229	177472354	+	41	3125	Intergenic	LTR16E2|LTR|ERVL	-5011	NR_031648	100302142		NR_031648	ENSG00000283203	MIR1246	MIRN1246|hsa-mir-1246	microRNA 1246	ncRNA	40.97	9.22	4.443600868	9.99E-12
chr2-1196	chr2	177598135	177599398	+	21.1	1263	Intergenic	L1ME3A|LINE|L1	96284	NR_110599	102724224	Hs.663125	NR_110599	ENSG00000224577	LINC01117	-	long intergenic non-protein coding RNA 1117	ncRNA	21.12	4.85	4.354639175	2.52E-06
chr2-12	chr2	91634751	91636009	+	49.9	1258	Intergenic	CpG	212595	NR_027238	654342	Hs.469287	NR_027238		LOC654342	-	lymphocyte-specific protein 1 pseudogene	pseudo	49.93	1.94	25.7371134	1.27E-40
chr2-1201	chr2	201171706	201173122	+	23	1416	"intron (NM_001100423, intron 1 of 12)"	CpG	1058	NM_001100423	26010	Hs.120323	NM_015535	ENSG00000196141	SPATS2L	DNAPTP6|SGNP	spermatogenesis associated serine rich 2 like	protein-coding	23.04	0.97	23.75257732	5.03E-19
chr2-1210	chr2	219658664	219659664	+	17.9	1000	"intron (NM_000784, intron 1 of 8)"	MER61-int|LTR|ERV1	12692	NM_000784	1593	Hs.516700	NM_000784	ENSG00000135929	CYP27A1	CP27|CTX|CYP27	cytochrome P450 family 27 subfamily A member 1	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr2-1218	chr2	223161745	223167010	+	73	5265	promoter-TSS (NM_181458)	promoter-TSS (NM_181458)	-662	NM_181461	5077	Hs.42146	NM_000438	ENSG00000135903	PAX3	CDHS|HUP2|WS1|WS3	paired box 3	protein-coding	72.97	8.74	8.348970252	1.06E-32
chr2-1220	chr2	224907253	224908253	+	17.9	1000	Intergenic	Intergenic	-3717	NM_006216	5270	Hs.38449	NM_006216	ENSG00000135919	SERPINE2	GDN|GDNPF|PI-7|PI7|PN-1|PN1|PNI	serpin family E member 2	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr2-1221	chr2	227996561	227997561	+	16.6	1000	"intron (NM_000092, intron 4 of 47)"	L2b|LINE|L2	32214	NM_000092	1286	Hs.591645	NM_000092	ENSG00000081052	COL4A4	CA44	collagen type IV alpha 4 chain	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr2-1224	chr2	233338803	233340688	+	32	1885	Intergenic	L3|LINE|CR1	12824	NM_004826	9427	Hs.26880	NM_004826	ENSG00000171551	ECEL1	DA5D|DINE|ECEX|XCE	endothelin converting enzyme like 1	protein-coding	32	1.94	16.49484536	5.00E-22
chr2-1226	chr2	233906698	233908145	+	22.4	1447	Intergenic	Intergenic	10039	NM_005383	4759	Hs.532681	NM_005383	ENSG00000115488	NEU2	SIAL2	neuraminidase 2	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr2-1227	chr2	234606959	234608221	+	20.5	1262	"intron (NM_001072, intron 1 of 4)"	"intron (NM_001072, intron 1 of 4)"	6078	NM_001072	54578	Hs.554822	NM_001072	ENSG00000167165	UGT1A6	GNT1|HLUGP|HLUGP1|UDPGT|UDPGT 1-6|UGT1|UGT1A6S|UGT1F	UDP glucuronosyltransferase family 1 member A6	protein-coding	20.48	1.46	14.02739726	1.29E-13
chr2-1229	chr2	235538833	235539833	+	18.6	1000	Intergenic	Intergenic	-51979	NR_132376	106144537	Hs.580616	NR_132376	ENSG00000280744	LINC01173	-	long intergenic non-protein coding RNA 1173	ncRNA	18.56	4.37	4.247139588	1.41E-05
chr2-1233	chr2	236150218	236152036	+	31.4	1818	Intergenic	Intergenic	-251606	NM_001037131	116987	Hs.435039	NM_014914	ENSG00000157985	AGAP1	AGAP-1|CENTG2|GGAP1|cnt-g2	"ArfGAP with GTPase domain, ankyrin repeat and PH domain 1"	protein-coding	31.36	6.31	4.969889065	6.13E-10
chr2-1234	chr2	236478198	236479198	+	17.9	1000	"intron (NM_001037131, intron 1 of 17)"	"intron (NM_001037131, intron 1 of 17)"	64303	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	17.92	3.4	5.270588235	8.42E-07
chr2-1240	chr2	237766058	237767579	+	24.3	1521	Intergenic	Intergenic	197992	NR_135202	93463	Hs.652810	NR_135202	ENSG00000124835	LOC93463	-	uncharacterized LOC93463	ncRNA	24.32	3.88	6.268041237	6.68E-10
chr2-1241	chr2	237947418	237948418	+	17.9	1000	Intergenic	Intergenic	16892	NR_135202	93463	Hs.652810	NR_135202	ENSG00000124835	LOC93463	-	uncharacterized LOC93463	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr2-1245	chr2	238287627	238288627	+	17.3	1000	"intron (NM_057167, intron 4 of 42)"	"intron (NM_057167, intron 4 of 42)"	34723	NM_057167	1293	Hs.233240	NM_004369	ENSG00000163359	COL6A3	BTHLM1|DYT27|UCMD1	collagen type VI alpha 3 chain	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr2-1248	chr2	239144705	239145705	+	17.9	1000	Intergenic	Intergenic	3560	NM_001142853	55502	Hs.42949	NM_018645	ENSG00000144485	HES6	C-HAIRY1|HES-6|bHLHb41|bHLHc23	hes family bHLH transcription factor 6	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr2-125	chr2	978705	980504	+	37.1	1799	"intron (NM_018968, intron 1 of 16)"	"intron (NM_018968, intron 1 of 16)"	-32526	NR_136151	101060391	Hs.120377	NR_136151		LOC101060391	-	uncharacterized LOC101060391	ncRNA	37.12	6.8	5.458823529	7.17E-13
chr2-1250	chr2	239837715	239839210	+	23.7	1495	Intergenic	Intergenic	9503	NR_034162	401039	Hs.516791	NM_001001698	ENSG00000227744	LINC01940	-	long intergenic non-protein coding RNA 1940	ncRNA	23.68	4.37	5.418764302	2.46E-08
chr2-1252	chr2	241115280	241118467	+	62.1	3187	Intergenic	L1M5|LINE|L1	-36800	NM_148961	150677	Hs.148586	NM_148961	ENSG00000178602	OTOS	OTOSP	otospiralin	protein-coding	62.09	6.31	9.839936609	1.16E-30
chr2-1257	chr2	241684309	241685966	+	28.2	1657	"intron (NM_001330290, intron 30 of 47)"	"intron (NM_001330290, intron 30 of 47)"	53875	NM_198998	375318	Hs.534650	NM_198998	ENSG00000184945	AQP12A	AQP-12|AQP12|AQPX2	aquaporin 12A	protein-coding	28.16	3.88	7.257731959	1.97E-12
chr2-1259	chr2	241796896	241797896	+	17.9	1000	Intergenic	Intergenic	-10766	NM_000030	189	Hs.144567	NM_000030	ENSG00000172482	AGXT	AGT|AGT1|AGXT1|PH1|SPAT|SPT|TLH6	alanine-glyoxylate aminotransferase	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr2-1267	chr2	917169	918615	+	19.8	1446	Intergenic	Intergenic	-16755	NR_110179	101060385	Hs.385965	NR_110179	ENSG00000228799	LINC01939	-	long intergenic non-protein coding RNA 1939	ncRNA	19.84	1.46	13.5890411	1.82E-12
chr2-1270	chr2	1882637	1889081	+	96	6444	"intron (NM_001329845, intron 18 of 24)"	MIRc|SINE|MIR	-137540	NM_012293	7837	Hs.332197	NM_012293	ENSG00000130508	PXDN	COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO	peroxidasin	protein-coding	96.01	20.39	4.708680726	8.84E-27
chr2-1273	chr2	1932024	1934400	+	35.2	2376	"intron (NM_001329845, intron 9 of 24)"	"intron (NM_001329845, intron 9 of 24)"	-184893	NM_012293	7837	Hs.332197	NM_012293	ENSG00000130508	PXDN	COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO	peroxidasin	protein-coding	35.2	6.31	5.57844691	4.08E-12
chr2-1274	chr2	1967744	1969488	+	28.8	1744	"intron (NM_001329845, intron 8 of 24)"	"intron (NM_001329845, intron 8 of 24)"	-220297	NM_012293	7837	Hs.332197	NM_012293	ENSG00000130508	PXDN	COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO	peroxidasin	protein-coding	28.8	3.4	8.470588235	1.50E-13
chr2-1277	chr2	2367063	2368063	+	17.9	1000	Intergenic	Intergenic	-32478	NM_015025	23040	Hs.434418	NM_015025	ENSG00000186487	MYT1L	MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L	myelin transcription factor 1 like	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr2-1278	chr2	2473291	2477060	+	57.6	3769	Intergenic	Intergenic	-140090	NM_015025	23040	Hs.434418	NM_015025	ENSG00000186487	MYT1L	MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L	myelin transcription factor 1 like	protein-coding	57.61	10.19	5.653581943	1.24E-19
chr2-1279	chr2	2631661	2632661	+	17.9	1000	Intergenic	L1ME3A|LINE|L1	-297076	NM_015025	23040	Hs.434418	NM_015025	ENSG00000186487	MYT1L	MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L	myelin transcription factor 1 like	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr2-1282	chr2	5688499	5690334	+	28.2	1835	Intergenic	Intergenic	141834	NR_110580	102723818	Hs.128107	NR_110580		LINC01248	-	long intergenic non-protein coding RNA 1248	ncRNA	28.16	4.85	5.806185567	1.30E-10
chr2-1285	chr2	7548386	7549386	+	17.9	1000	Intergenic	MIRb|SINE|MIR	-12506	NR_038432	100506274	Hs.177930	NR_038432	ENSG00000229727	LOC100506274	-	uncharacterized LOC100506274	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr2-1286	chr2	8697082	8698082	+	17.9	1000	Intergenic	Intergenic	26340	NR_110257	101929567	Hs.634706	NR_110257	ENSG00000236008	LINC01814	-	long intergenic non-protein coding RNA 1814	ncRNA	17.92	3.4	5.270588235	8.42E-07
chr2-1287	chr2	8817620	8820437	+	34.6	2817	TTS (NR_110153)	TTS (NR_110153)	2963	NR_110153	100506299	Hs.439031	NR_110153	ENSG00000235092	ID2-AS1	-	ID2 antisense RNA 1 (head to head)	ncRNA	34.56	1.94	17.81443299	1.63E-24
chr2-1290	chr2	9486852	9487852	+	16	1000	"intron (NM_001135191, intron 11 of 26)"	"intron (NM_001135191, intron 11 of 26)"	75437	NR_134951	9270	Hs.467662	NM_004763	ENSG00000119185	ITGB1BP1	ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B	integrin subunit beta 1 binding protein 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr2-1291	chr2	9513318	9514318	+	16.6	1000	"intron (NM_001135191, intron 16 of 26)"	"intron (NM_001135191, intron 16 of 26)"	48971	NR_134951	9270	Hs.467662	NM_004763	ENSG00000119185	ITGB1BP1	ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B	integrin subunit beta 1 binding protein 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-1292	chr2	10090203	10093061	+	33.9	2858	promoter-TSS (NM_198182)	promoter-TSS (NM_198182)	-160	NM_198182	29841	Hs.418493	NM_198182	ENSG00000134317	GRHL1	LBP32|MGR|NH32|TFCP2L2	grainyhead like transcription factor 1	protein-coding	33.92	0.97	34.96907216	8.73E-31
chr2-1312	chr2	20057304	20058304	+	17.9	1000	Intergenic	Intergenic	-10811	NR_033875	400946	Hs.289062	NR_033875	ENSG00000228784	LINC00954	-	long intergenic non-protein coding RNA 954	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr2-1314	chr2	20289025	20290025	+	16.6	1000	Intergenic	LTR8A|LTR|ERV1	-37736	NM_014713	9741	Hs.467807	NM_014713	ENSG00000068697	LAPTM4A	HUMORF13|LAPTM4|MBNT|Mtrp	lysosomal protein transmembrane 4 alpha	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-1318	chr2	20739341	20740341	+	17.3	1000	Intergenic	Intergenic	52467	NR_046836	100874343	Hs.591546	NR_046836	ENSG00000231948	HS1BP3-IT1	-	HS1BP3 intronic transcript 1	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr2-1320	chr2	23745188	23746592	+	19.2	1404	"intron (NM_052920, intron 2 of 13)"	"intron (NM_052920, intron 2 of 13)"	137592	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	19.2	2.43	7.901234568	1.91E-09
chr2-1322	chr2	23773693	23774693	+	17.9	1000	"intron (NM_052920, intron 2 of 13)"	"intron (NM_052920, intron 2 of 13)"	165895	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr2-1335	chr2	27497791	27499044	+	18.6	1253	promoter-TSS (NM_001318949)	promoter-TSS (NM_001318949)	128	NM_173650	285126	Hs.116303	NM_173650	ENSG00000163793	DNAJC5G	CSP-gamma	DnaJ heat shock protein family (Hsp40) member C5 gamma	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr2-1337	chr2	29484002	29485262	+	18.6	1260	"intron (NM_004304, intron 11 of 28)"	"intron (NM_004304, intron 11 of 28)"	146340	NM_024692	79745	Hs.122927	NM_024692	ENSG00000115295	CLIP4	RSNL2	CAP-Gly domain containing linker protein family member 4	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr2-1339	chr2	29814875	29815875	+	17.9	1000	"intron (NM_004304, intron 3 of 28)"	"intron (NM_004304, intron 3 of 28)"	-117132	NR_136317	105374389	Hs.196534	NR_136317		LOC105374389	-	uncharacterized LOC105374389	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr2-1343	chr2	30581546	30582546	+	16.6	1000	Intergenic	MamRep137|DNA|TcMar?	12534	NR_122048	285043	Hs.429119	NR_122048		LOC285043	-	uncharacterized LOC285043	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr2-1344	chr2	30668467	30669467	+	16.6	1000	Intergenic	Intergenic	-1125	NM_001002257	253558	Hs.468048	NM_182551	ENSG00000172954	LCLAT1	1AGPAT8|AGPAT8|ALCAT1|HSRG1849|LYCAT|UNQ1849	lysocardiolipin acyltransferase 1	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr2-1347	chr2	36677471	36678471	+	17.9	1000	"intron (NM_016441, intron 4 of 16)"	"intron (NM_016441, intron 4 of 16)"	94601	NM_016441	51232	Hs.699247	NM_016441	ENSG00000150938	CRIM1	CRIM-1|S52	cysteine rich transmembrane BMP regulator 1	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr2-1350	chr2	37612714	37613714	+	17.3	1000	Intergenic	Charlie15a|DNA|hAT-Charlie	41461	NM_012413	25797	Hs.79033	NM_012413	ENSG00000115828	QPCT	GCT|QC|sQC	glutaminyl-peptide cyclotransferase	protein-coding	17.28	0.49	35.26530612	3.68E-16
chr2-1351	chr2	37846761	37847761	+	17.3	1000	Intergenic	Intergenic	52081	NM_006449	10602	Hs.369574	NM_006449	ENSG00000163171	CDC42EP3	BORG2|CEP3|UB1	CDC42 effector protein 3	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr2-1353	chr2	38422998	38425900	+	39	2902	Intergenic	MER81|DNA|hAT-Blackjack	66202	NR_027252	285154	Hs.353894	NM_173652	ENSG00000232973	CYP1B1-AS1	C2orf58	CYP1B1 antisense RNA 1	ncRNA	39.04	7.28	5.362637363	6.93E-13
chr2-1354	chr2	38509293	38510293	+	16.6	1000	Intergenic	AluSx1|SINE|Alu	93879	NM_001330460	64225	Hs.594950	NM_022374	ENSG00000119787	ATL2	ARL3IP2|ARL6IP2|aip-2|atlastin2	atlastin GTPase 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr2-1355	chr2	42126380	42127380	+	17.3	1000	Intergenic	Charlie8|DNA|hAT-Charlie	22185	NR_033996	388942	Hs.631883	NR_033996	ENSG00000214691	LINC01913	-	long intergenic non-protein coding RNA 1913	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr2-1361	chr2	45395602	45398763	+	55.7	3161	Intergenic	CpG	84898	NR_033831	400952	Hs.468368	NR_033831	ENSG00000205054	LINC01121	UNQ6975	long intergenic non-protein coding RNA 1121	ncRNA	55.69	5.82	9.568728522	3.84E-27
chr2-1365	chr2	46568239	46570212	+	37.1	1973	"intron (NM_001430, intron 1 of 15)"	MER5B|DNA|hAT-Charlie	44684	NM_001430	2034	Hs.468410	NM_001430	ENSG00000116016	EPAS1	ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73	endothelial PAS domain protein 1	protein-coding	37.12	3.88	9.567010309	5.72E-19
chr2-1371	chr2	66800425	66801425	+	16.6	1000	promoter-TSS (NR_110156)	promoter-TSS (NR_110156)	-237	NR_110156	100507073	Hs.667940	NR_110156	ENSG00000232046	LINC01798	-	long intergenic non-protein coding RNA 1798	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr2-1373	chr2	68005770	68006770	+	16.6	1000	Intergenic	L1M1|LINE|L1	46424	NR_110271	101927701	Hs.348697	NR_110271	ENSG00000237013	LINC01812	-	long intergenic non-protein coding RNA 1812	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr2-1374	chr2	68583054	68584054	+	17.9	1000	Intergenic	LTR78|LTR|ERV1	-8768	NM_002664	5341	Hs.468840	NM_002664	ENSG00000115956	PLEK	P47	pleckstrin	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr2-1376	chr2	70554000	70555000	+	17.9	1000	Intergenic	MLT1B|LTR|ERVL-MaLR	-25280	NM_032822	84908	Hs.516077	NM_032822	ENSG00000035141	FAM136A	-	family with sequence similarity 136 member A	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr2-1378	chr2	70837597	70838597	+	17.3	1000	Intergenic	Intergenic	-56950	NM_001099691	7039	Hs.170009	NM_003236	ENSG00000163235	TGFA	TFGA	transforming growth factor alpha	protein-coding	17.28	1.46	11.83561644	2.99E-10
chr2-1379	chr2	70904748	70906119	+	20.5	1371	"intron (NM_017482, intron 11 of 12)"	"intron (NM_017482, intron 11 of 12)"	89414	NM_001185054	119	Hs.66187	NM_001617	ENSG00000075340	ADD2	ADDB	adducin 2	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr2-1382	chr2	71132312	71134107	+	28.8	1795	"intron (NM_012476, intron 1 of 2)"	"intron (NM_012476, intron 1 of 2)"	5489	NM_012476	25806	Hs.249170	NM_012476	ENSG00000116035	VAX2	DRES93	ventral anterior homeobox 2	protein-coding	28.8	3.88	7.422680412	1.97E-12
chr2-1387	chr2	73341092	73342642	+	26.9	1550	Intergenic	MER1A|DNA|hAT-Charlie	-1721	NM_015470	26056	Hs.24557	NM_015470	ENSG00000135631	RAB11FIP5	GAF1|RIP11|pp75	RAB11 family interacting protein 5	protein-coding	26.88	1.94	13.8556701	2.90E-17
chr2-1389	chr2	74499709	74500709	+	16.6	1000	"intron (NM_021196, intron 3 of 25)"	MER5B|DNA|hAT-Charlie	41943	NM_021196	57835	Hs.594099	NM_021196	ENSG00000188687	SLC4A5	NBC4|NBCe2	solute carrier family 4 member 5	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr2-1392	chr2	75425323	75428617	+	64	3294	promoter-TSS (NM_001058)	promoter-TSS (NM_001058)	-325	NM_001058	6869	Hs.633301	NM_001058	ENSG00000115353	TACR1	NK1R|NKIR|SPR|TAC1R	tachykinin receptor 1	protein-coding	64.01	7.77	8.238095238	1.21E-28
chr2-1393	chr2	75769228	75770228	+	17.3	1000	"non-coding (NR_110281, exon 3 of 3)"	"non-coding (NR_110281, exon 3 of 3)"	18364	NM_001135032	84141	Hs.302346	NM_032181	ENSG00000115363	EVA1A	FAM176A|TMEM166	"eva-1 homolog A, regulator of programmed cell death"	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr2-1397	chr2	84775521	84776782	+	20.5	1261	"intron (NM_001370, intron 8 of 76)"	"intron (NM_001370, intron 8 of 76)"	32572	NM_001370	1768	Hs.249972	NM_001370	ENSG00000115423	DNAH6	DNHL1|Dnahc6|HL-2|HL2	dynein axonemal heavy chain 6	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr2-1400	chr2	86023358	86024692	+	23	1334	Intergenic	Intergenic	-13225	NR_106719	102466516		NR_106719	ENSG00000278783	MIR6071	hsa-mir-6071	microRNA 6071	ncRNA	23.04	3.88	5.93814433	4.22E-09
chr2-1417	chr2	95708953	95709953	+	17.3	1000	"intron (NM_022440, intron 1 of 1)"	"intron (NM_022440, intron 1 of 1)"	18053	NM_022438	4118	Hs.80395	NM_002371	ENSG00000172005	MAL	-	"mal, T-cell differentiation protein"	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr2-1425	chr2	97650412	97651412	+	17.9	1000	"intron (NM_001122646, intron 1 of 16)"	"intron (NM_001122646, intron 1 of 16)"	1389	NM_001122646	51252	Hs.107922	NM_016490	ENSG00000168754	FAM178B	-	family with sequence similarity 178 member B	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr2-1428	chr2	98024048	98025048	+	16.6	1000	Intergenic	Intergenic	65072	NR_130704	100506123	Hs.720604	NR_040097		LOC100506123	-	uncharacterized LOC100506123	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr2-1429	chr2	98776507	98777507	+	17.3	1000	"intron (NM_001345864, intron 1 of 21)"	"intron (NM_001345864, intron 1 of 21)"	11049	NM_001345864	200403	Hs.269977	NM_144992	ENSG00000168658	VWA3B	SCAR22	von Willebrand factor A domain containing 3B	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr2-1436	chr2	101555702	101556702	+	17.3	1000	"intron (NM_002518, intron 5 of 20)"	"intron (NM_002518, intron 5 of 20)"	37421	NR_110213	101927142	Hs.656556	NR_110213		LOC101927142	-	uncharacterized LOC101927142	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr2-1441	chr2	103235402	103236402	+	17.3	1000	promoter-TSS (NM_003048)	promoter-TSS (NM_003048)	-91	NM_003048	6549	Hs.250083	NM_003048	ENSG00000115616	SLC9A2	NHE2	solute carrier family 9 member A2	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr2-1442	chr2	105487390	105488943	+	24.3	1553	"intron (NR_110374, intron 1 of 1)"	"intron (NR_110374, intron 1 of 1)"	887	NR_110374	102682016	Hs.638438	NR_110373	ENSG00000229743	LINC01159	linc-Brn1b	long intergenic non-protein coding RNA 1159	ncRNA	24.32	2.91	8.357388316	5.77E-12
chr2-1444	chr2	107197615	107198615	+	17.3	1000	Intergenic	Intergenic	-113314	NM_001144013	653489	Hs.726367	NM_001144013	ENSG00000153165	RGPD3	RGP3	RANBP2-like and GRIP domain containing 3	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr2-1446	chr2	109746366	109747366	+	17.3	1000	promoter-TSS (NR_029193)	promoter-TSS (NR_029193)	-291	NR_029193	100287216	Hs.171244	NR_029193		SH3RF3-AS1	-	SH3RF3 antisense RNA 1	ncRNA	17.28	0	17.80043126	3.68E-16
chr2-1449	chr2	110261149	110262149	+	17.9	1000	"3' UTR (NM_001099289, exon 10 of 10)"	"3' UTR (NM_001099289, exon 10 of 10)"	109585	NM_001321515	151011	Hs.469615	NM_144710	ENSG00000186522	10-Sep	-	septin 10	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr2-1450	chr2	110402245	110403626	+	20.5	1381	Intergenic	Intergenic	31024	NM_023016	65124	Hs.355455	NM_023016	ENSG00000198142	SOWAHC	ANKRD57|C2orf26	sosondowah ankyrin repeat domain family member C	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr2-1451	chr2	111562591	111563861	+	18.6	1270	"intron (NM_001142807, intron 9 of 17)"	"intron (NM_001142807, intron 9 of 17)"	73076	NM_001142807	55289	Hs.253320	NM_018308	ENSG00000153093	ACOXL	-	acyl-CoA oxidase-like	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr2-1452	chr2	111709315	111710315	+	17.3	1000	"intron (NM_001142807, intron 12 of 17)"	L1MEe|LINE|L1	163350	NR_122074	400997	Hs.652337	NR_122074	ENSG00000204581	ACOXL-AS1	-	ACOXL antisense RNA 1	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr2-1453	chr2	111793481	111802357	+	113.9	8876	"intron (NM_001142807, intron 15 of 17)"	"intron (NM_001142807, intron 15 of 17)"	75246	NR_122074	400997	Hs.652337	NR_122074	ENSG00000204581	ACOXL-AS1	-	ACOXL antisense RNA 1	ncRNA	113.93	28.15	4.047246892	6.50E-27
chr2-1455	chr2	111873595	111878506	+	96	4911	TTS (NM_001142807)	TTS (NM_001142807)	-2441	NM_138622	10018	Hs.469658	NM_006538	ENSG00000153094	BCL2L11	BAM|BIM|BOD	BCL2 like 11	protein-coding	96.01	21.36	4.494850187	1.37E-25
chr2-1457	chr2	113712392	113713392	+	17.3	1000	Intergenic	Intergenic	-22704	NM_001278568	56300	Hs.211238	NM_019618	ENSG00000136688	IL36G	IL-1F9|IL-1H1|IL-1RP2|IL1E|IL1F9|IL1H1|IL1RP2	"interleukin 36, gamma"	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr2-1458	chr2	113826463	113827463	+	17.3	1000	"intron (NM_173161, intron 1 of 4)"	"intron (NM_173161, intron 1 of 4)"	1416	NM_173161	84639	Hs.306974	NM_032556	ENSG00000136697	IL1F10	FIL1-theta|FKSG75|IL-1HY2|IL-38|IL1-theta|IL1HY2	interleukin 1 family member 10 (theta)	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr2-1459	chr2	118423147	118424403	+	21.8	1256	Intergenic	Intergenic	-148480	NM_006773	8886	Hs.744922	NM_006773	ENSG00000088205	DDX18	MrDb	DEAD-box helicase 18	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr2-1463	chr2	121206530	121207530	+	17.9	1000	Intergenic	Intergenic	16895	NR_027181	84931	Hs.334519	NM_032845	ENSG00000280409	LINC01101	-	long intergenic non-protein coding RNA 1101	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr2-1464	chr2	121321996	121322996	+	17.9	1000	Intergenic	Intergenic	-98571	NR_027181	84931	Hs.334519	NM_032845	ENSG00000280409	LINC01101	-	long intergenic non-protein coding RNA 1101	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr2-1468	chr2	121643881	121644881	+	17.3	1000	"intron (NM_005270, intron 1 of 12)"	"intron (NM_005270, intron 1 of 12)"	89514	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr2-1472	chr2	122621624	122622624	+	17.3	1000	Intergenic	Intergenic	109003	NR_048557	7247	Hs.75066	NM_004622	ENSG00000211460	TSN	BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN	translin	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr2-1473	chr2	122785990	122786990	+	17.9	1000	Intergenic	Intergenic	273369	NR_048557	7247	Hs.75066	NM_004622	ENSG00000211460	TSN	BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN	translin	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr2-1474	chr2	122915001	122916374	+	23	1373	Intergenic	Intergenic	402566	NR_048557	7247	Hs.75066	NM_004622	ENSG00000211460	TSN	BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN	translin	protein-coding	23.04	4.37	5.272311213	2.46E-08
chr2-1476	chr2	128326586	128327586	+	16.6	1000	"intron (NM_001080527, intron 5 of 46)"	"intron (NM_001080527, intron 5 of 46)"	1451	NR_132317	105373609	Hs.677195	NR_132317		LOC105373609	-	uncharacterized LOC105373609	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr2-1477	chr2	128339172	128340506	+	21.8	1334	"intron (NM_001080527, intron 11 of 46)"	"intron (NM_001080527, intron 11 of 46)"	-11302	NR_132317	105373609	Hs.677195	NR_132317		LOC105373609	-	uncharacterized LOC105373609	ncRNA	21.76	4.85	4.486597938	5.54E-07
chr2-1483	chr2	132179038	132181325	+	37.1	2287	Intergenic	Intergenic	19707	NR_036499	389043	Hs.586791	NR_036499		LINC01120	-	long intergenic non-protein coding RNA 1120	ncRNA	37.12	5.34	6.951310861	1.96E-15
chr2-1485	chr2	132313127	132314127	+	16.6	1000	Intergenic	L1PA16|LINE|L1	28220	NM_001258304	90557	Hs.351461	NM_138770	ENSG00000163040	CCDC74A	-	coiled-coil domain containing 74A	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-1488	chr2	135495004	135496479	+	23.7	1475	Intergenic	Intergenic	-19170	NM_030923	81615	Hs.369471	NM_030923	ENSG00000152128	TMEM163	DC29|SV31	transmembrane protein 163	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr2-149	chr2	90449032	90451379	+	48.6	2347	Intergenic	CpG	1338321	NR_039635	100616399		NR_039635	ENSG00000265510	MIR4436A	mir-4436a	microRNA 4436a	ncRNA	48.65	6.31	7.709984152	3.34E-21
chr2-1490	chr2	145287175	145288175	+	17.3	1000	"intron (NR_110570, intron 1 of 2)"	"intron (NR_110570, intron 1 of 2)"	-5664	NR_136320	105373656	Hs.734683	NR_136320		LOC105373656	-	uncharacterized LOC105373656	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr2-1491	chr2	146055299	146056299	+	17.3	1000	Intergenic	Intergenic	630265	NR_033870	401014	Hs.742290	NR_033870	ENSG00000226674	TEX41	DKFZp686O1327|LINC00953	testis expressed 41 (non-protein coding)	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr2-1492	chr2	152756442	152757442	+	17.3	1000	"intron (NM_001145798, intron 2 of 12)"	L2c|LINE|L2	71624	NM_001330118	785	Hs.120725	NM_000726	ENSG00000182389	CACNB4	CAB4|CACNLB4|EA5|EIG9|EJM|EJM4|EJM6	calcium voltage-gated channel auxiliary subunit beta 4	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr2-1494	chr2	170547122	170548122	+	16.6	1000	"intron (NM_001085447, intron 1 of 8)"	L1MB7|LINE|L1	3309	NM_001085447	129881	Hs.370111	NM_001085447	ENSG00000154479	CCDC173	C2orf77	coiled-coil domain containing 173	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr2-151	chr2	91820646	91821646	+	25	1000	Intergenic	MER39|LTR|ERV1	26829	NR_027238	654342	Hs.469287	NR_027238		LOC654342	-	lymphocyte-specific protein 1 pseudogene	pseudo	24.96	5.82	4.288659794	3.56E-07
chr2-1516	chr2	192109157	192110157	+	17.9	1000	promoter-TSS (NM_012223)	promoter-TSS (NM_012223)	-345	NM_001130158	4430	Hs.439620	NM_012223	ENSG00000128641	MYO1B	MMI-alpha|MMIa|MYH-1c|myr1	myosin IB	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr2-1518	chr2	197457508	197459349	+	30.7	1841	Intergenic	CpG	-1093	NM_020760	57520	Hs.654742	NM_020760	ENSG00000138411	HECW2	NEDL2	"HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2"	protein-coding	30.72	2.91	10.55670103	6.73E-17
chr2-1524	chr2	204984918	204985918	+	17.9	1000	Intergenic	Intergenic	183947	NM_012092	29851	Hs.56247	NM_012092	ENSG00000163600	ICOS	AILIM|CD278|CVID1	inducible T-cell costimulator	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr2-1525	chr2	206593705	206596348	+	39.7	2643	"intron (NM_018534, intron 7 of 15)"	"intron (NM_018534, intron 7 of 15)"	47802	NM_201264	8828	Hs.471200	NM_003872	ENSG00000118257	NRP2	NP2|NPN2|PRO2714|VEGF165R2	neuropilin 2	protein-coding	39.69	3.88	10.22938144	5.62E-21
chr2-153	chr2	97646038	97647292	+	28.2	1254	"intron (NM_001122646, intron 1 of 16)"	L1M5|LINE|L1	5636	NM_001122646	51252	Hs.107922	NM_016490	ENSG00000168754	FAM178B	-	family with sequence similarity 178 member B	protein-coding	28.16	3.4	8.282352941	1.50E-13
chr2-1538	chr2	217814295	217815295	+	17.3	1000	Intergenic	Intergenic	79300	NR_130782	101928327	Hs.350698	NR_130782	ENSG00000223874	LINC01921	-	long intergenic non-protein coding RNA 1921	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr2-1540	chr2	218960155	218961155	+	17.3	1000	Intergenic	LTR5B|LTR|ERVK	26917	NM_198483	285180	Hs.570069	NM_198483	ENSG00000188282	RUFY4	ZFYVE31	RUN and FYVE domain containing 4	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr2-1546	chr2	219843130	219844130	+	17.9	1000	TTS (NR_015390)	TTS (NR_015390)	2624	NR_024385	151300	Hs.420716	NR_015390		LINC00608	-	long intergenic non-protein coding RNA 608	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr2-155	chr2	130479460	130481573	+	40.3	2113	Intergenic	Intergenic	-200234	NR_110285	101927924	Hs.570248	NR_110285	ENSG00000237574	LINC01856	-	long intergenic non-protein coding RNA 1856	ncRNA	40.33	2.91	13.85910653	1.57E-24
chr2-1554	chr2	220376609	220377609	+	17.9	1000	Intergenic	Intergenic	-1783	NM_182847	55515	Hs.87469	NM_018674	ENSG00000072182	ASIC4	ACCN4|BNAC4	acid sensing ion channel subunit family member 4	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr2-1556	chr2	220529130	220530130	+	16.6	1000	Intergenic	Intergenic	37338	NR_048551	6508	Hs.1176	NM_005070	ENSG00000114923	SLC4A3	AE3|CAE3/BAE3|SLC2C	solute carrier family 4 member 3	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr2-1558	chr2	220560529	220561529	+	16	1000	Intergenic	Intergenic	68737	NR_048551	6508	Hs.1176	NM_005070	ENSG00000114923	SLC4A3	AE3|CAE3/BAE3|SLC2C	solute carrier family 4 member 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-1559	chr2	222500753	222502300	+	21.1	1547	Intergenic	L1MC5|LINE|L1	-62604	NM_001304536	2043	Hs.371218	NM_004438	ENSG00000116106	EPHA4	HEK8|SEK|TYRO1	EPH receptor A4	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr2-1562	chr2	223168865	223170480	+	25.6	1615	"3' UTR (NM_153038, exon 2 of 2)"	"3' UTR (NM_153038, exon 2 of 2)"	-5957	NM_181461	5077	Hs.42146	NM_000438	ENSG00000135903	PAX3	CDHS|HUP2|WS1|WS3	paired box 3	protein-coding	25.6	1.94	13.19587629	4.03E-16
chr2-1563	chr2	228010996	228011996	+	19.2	1000	"intron (NM_000092, intron 2 of 47)"	MLT1D|LTR|ERVL-MaLR	17779	NM_000092	1286	Hs.591645	NM_000092	ENSG00000081052	COL4A4	CA44	collagen type IV alpha 4 chain	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr2-1568	chr2	233288399	233289720	+	17.3	1321	Intergenic	AluSz|SINE|Alu	17507	NM_031313	251	Hs.333509	NM_031313	ENSG00000163286	ALPPL2	ALPG|ALPPL|GCAP	"alkaline phosphatase, placental like 2"	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr2-1573	chr2	234965374	234966374	+	16.6	1000	"intron (NM_006944, intron 2 of 7)"	L2a|LINE|L2	6528	NM_006944	6694	Hs.444488	NM_006944	ENSG00000072080	SPP2	SPP-24|SPP24	secreted phosphoprotein 2	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr2-1578	chr2	235721964	235725186	+	46.1	3222	Intergenic	MSTB|LTR|ERVL-MaLR	132263	NR_132376	106144537	Hs.580616	NR_132376	ENSG00000280744	LINC01173	-	long intergenic non-protein coding RNA 1173	ncRNA	46.09	5.82	7.919243986	1.58E-20
chr2-1580	chr2	235793749	235794749	+	17.3	1000	Intergenic	Intergenic	-66379	NM_014521	23677	Hs.516777	NM_014521	ENSG00000130147	SH3BP4	BOG25|TTP	SH3 domain binding protein 4	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr2-1582	chr2	235916276	235917899	+	25.6	1623	"intron (NM_014521, intron 2 of 5)"	"intron (NM_014521, intron 2 of 5)"	56459	NM_014521	23677	Hs.516777	NM_014521	ENSG00000130147	SH3BP4	BOG25|TTP	SH3 domain binding protein 4	protein-coding	25.6	0.97	26.39175258	7.61E-22
chr2-1584	chr2	235942570	235944917	+	37.1	2347	"exon (NM_014521, exon 3 of 6)"	"exon (NM_014521, exon 3 of 6)"	83115	NM_014521	23677	Hs.516777	NM_014521	ENSG00000130147	SH3BP4	BOG25|TTP	SH3 domain binding protein 4	protein-coding	37.12	4.85	7.653608247	1.78E-16
chr2-1589	chr2	236598533	236601399	+	43.5	2866	"intron (NM_001037131, intron 1 of 17)"	"intron (NM_001037131, intron 1 of 17)"	185571	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	43.53	7.28	5.979395604	6.36E-16
chr2-1595	chr2	237027414	237029344	+	33.3	1930	"intron (NM_001037131, intron 16 of 17)"	"intron (NM_001037131, intron 16 of 17)"	48273	NM_001485	2637	Hs.184945	NM_001485	ENSG00000168505	GBX2	-	gastrulation brain homeobox 2	protein-coding	33.28	3.88	8.577319588	4.55E-16
chr2-160	chr2	220119246	220121334	+	47.4	2088	promoter-TSS (NM_001278552)	promoter-TSS (NM_001278552)	-960	NM_001278552	7277	Hs.75318	NM_006000	ENSG00000127824	TUBA4A	ALS22|H2-ALPHA|TUBA1	tubulin alpha 4a	protein-coding	47.37	5.82	8.139175258	1.93E-21
chr2-1601	chr2	237520602	237521602	+	17.9	1000	Intergenic	Intergenic	42722	NM_020311	57007	Hs.471751	NM_020311	ENSG00000144476	ACKR3	CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1	atypical chemokine receptor 3	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr2-1606	chr2	238320264	238321873	+	26.9	1609	"intron (NM_057167, intron 1 of 42)"	"intron (NM_057167, intron 1 of 42)"	1782	NM_057167	1293	Hs.233240	NM_004369	ENSG00000163359	COL6A3	BTHLM1|DYT27|UCMD1	collagen type VI alpha 3 chain	protein-coding	26.88	2.91	9.237113402	7.03E-14
chr2-1607	chr2	238389849	238391264	+	21.1	1415	Intergenic	Intergenic	-4497	NM_001281474	79083	Hs.102406	NM_024101	ENSG00000115648	MLPH	SLAC2-A	melanophilin	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr2-161	chr2	1453126	1454376	+	27.5	1250	"intron (NM_175721, intron 4 of 14)"	"intron (NM_175721, intron 4 of 14)"	35571	NM_175721	7173	Hs.467554	NM_000547	ENSG00000115705	TPO	MSA|TDH2A|TPX	thyroid peroxidase	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr2-1612	chr2	238440770	238441770	+	17.3	1000	"intron (NM_001281473, intron 7 of 12)"	"intron (NM_001281473, intron 7 of 12)"	21696	NR_106869	102465486		NR_106869	ENSG00000277842	MIR6811	hsa-mir-6811	microRNA 6811	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr2-1619	chr2	240698153	240699153	+	17.3	1000	"intron (NR_037808, intron 1 of 2)"	HAL1|LINE|L1	14099	NR_037808	150935	Hs.555582	NR_037808		LOC150935	-	uncharacterized LOC150935	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr2-162	chr2	16847241	16848770	+	31.4	1529	promoter-TSS (NM_030797)	promoter-TSS (NM_030797)	-871	NM_030797	81553	Hs.467769	NM_030797	ENSG00000197872	FAM49A	-	family with sequence similarity 49 member A	protein-coding	31.36	2.91	10.7766323	6.73E-17
chr2-1620	chr2	241093754	241094754	+	17.3	1000	Intergenic	Intergenic	-14181	NM_148961	150677	Hs.148586	NM_148961	ENSG00000178602	OTOS	OTOSP	otospiralin	protein-coding	17.28	1.46	11.83561644	2.99E-10
chr2-1623	chr2	241375416	241376997	+	23.7	1581	"intron (NM_002081, intron 1 of 8)"	CpG	1091	NM_002081	2817	Hs.328232	NM_002081	ENSG00000063660	GPC1	glypican	glypican 1	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr2-1625	chr2	241654517	241659201	+	64.6	4684	"intron (NM_001330290, intron 47 of 47)"	"intron (NM_001330290, intron 47 of 47)"	25597	NM_198998	375318	Hs.534650	NM_198998	ENSG00000184945	AQP12A	AQP-12|AQP12|AQPX2	aquaporin 12A	protein-coding	64.65	10.68	6.053370787	1.08E-22
chr2-1627	chr2	357125	359490	+	37.8	2365	Intergenic	Intergenic	-69999	NM_001002919	285016	Hs.355207	NM_001002919	ENSG00000189292	FAM150B	AUGA|PRO1097|RGPG542	family with sequence similarity 150 member B	protein-coding	37.76	5.34	7.071161049	1.96E-15
chr2-1628	chr2	692082	693347	+	16.6	1265	Intergenic	Intergenic	-15275	NM_152834	129787	Hs.43899	NM_152834	ENSG00000151353	TMEM18	-	transmembrane protein 18	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-1635	chr2	1857523	1860687	+	42.9	3164	"intron (NM_001329845, intron 18 of 24)"	"intron (NM_001329845, intron 18 of 24)"	-110786	NM_012293	7837	Hs.332197	NM_012293	ENSG00000130508	PXDN	COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO	peroxidasin	protein-coding	42.89	9.71	4.417095778	8.16E-12
chr2-1636	chr2	1862827	1864138	+	21.1	1311	"intron (NM_001329845, intron 18 of 24)"	"intron (NM_001329845, intron 18 of 24)"	-115163	NM_012293	7837	Hs.332197	NM_012293	ENSG00000130508	PXDN	COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO	peroxidasin	protein-coding	21.12	0.97	21.77319588	2.68E-16
chr2-1643	chr2	3097602	3098602	+	17.3	1000	"intron (NR_110228, intron 3 of 6)"	"intron (NR_110228, intron 3 of 6)"	31696	NR_110228	101927554	Hs.638446	NR_110228	ENSG00000234423	LINC01250	-	long intergenic non-protein coding RNA 1250	ncRNA	17.28	2.43	7.111111111	1.14E-07
chr2-1647	chr2	6650176	6651176	+	15.4	1000	Intergenic	Intergenic	123243	NR_110500	102800315	Hs.729713	NR_110498	ENSG00000236172	LINC01246	-	long intergenic non-protein coding RNA 1246	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr2-1648	chr2	8548744	8550259	+	24.3	1515	Intergenic	Intergenic	-80952	NR_034135	339789	Hs.565619	NM_207358	ENSG00000236790	LINC00299	C2orf46|NCRNA00299	long intergenic non-protein coding RNA 299	ncRNA	24.32	2.91	8.357388316	5.77E-12
chr2-1650	chr2	8676240	8677821	+	25.6	1581	Intergenic	Intergenic	46892	NR_110257	101929567	Hs.634706	NR_110257	ENSG00000236008	LINC01814	-	long intergenic non-protein coding RNA 1814	ncRNA	25.6	2.91	8.797250859	6.53E-13
chr2-1656	chr2	9371702	9372702	+	16.6	1000	"intron (NM_001135191, intron 1 of 26)"	"intron (NM_001135191, intron 1 of 26)"	25308	NM_003887	8853	Hs.555902	NM_003887	ENSG00000151693	ASAP2	AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 2"	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr2-1663	chr2	9861895	9863533	+	24.3	1638	Intergenic	Intergenic	-91530	NM_006826	10971	Hs.74405	NM_006826	ENSG00000134308	YWHAQ	14-3-3|1C5|HS1	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr2-1664	chr2	9883245	9884527	+	16	1282	Intergenic	MLT1C|LTR|ERVL-MaLR	-99685	NM_001318977	9014	Hs.584833	NM_005680	ENSG00000115750	TAF1B	MGC:9349|RAF1B|RAFI63|SL1|TAFI63	"TATA-box binding protein associated factor, RNA polymerase I subunit B"	protein-coding	16	1.94	8.24742268	7.67E-08
chr2-1665	chr2	10175185	10176185	+	16.6	1000	Intergenic	AluSx|SINE|Alu	7843	NR_135558	101929882	Hs.405158	NR_135558		LOC101929882	-	uncharacterized LOC101929882	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr2-1666	chr2	10195488	10196997	+	23.7	1509	TTS (NM_001037160)	TTS (NM_001037160)	11870	NM_001177718	8462	Hs.12229	NM_003597	ENSG00000172059	KLF11	FKLF|FKLF1|MODY7|TIEG2|Tieg3	Kruppel like factor 11	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr2-1667	chr2	10214548	10215548	+	16	1000	"intron (NM_001037160, intron 1 of 2)"	AluSz|SINE|Alu	5490	NM_001037160	192668	Hs.27092	NM_001037160	ENSG00000205795	CYS1	-	cystin 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr2-1670	chr2	10509911	10511168	+	19.2	1257	"intron (NM_001258359, intron 1 of 4)"	"intron (NM_001258359, intron 1 of 4)"	1649	NM_001258359	3241	Hs.580427	NM_002149	ENSG00000115756	HPCAL1	BDR1|HLP2|VILIP-3	hippocalcin like 1	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr2-1677	chr2	11117336	11118720	+	19.2	1384	Intergenic	Intergenic	65965	NM_002236	3754	Hs.23735	NM_002236	ENSG00000162975	KCNF1	IK8|KCNF|KV5.1|kH1	potassium voltage-gated channel modifier subfamily F member 1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr2-1678	chr2	11866232	11867232	+	16	1000	"intron (NM_001261429, intron 1 of 9)"	"intron (NM_001261429, intron 1 of 9)"	2272	NM_001261429	23175	Hs.467740	NM_145693	ENSG00000134324	LPIN1	PAP1	lipin 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-1680	chr2	12318369	12319369	+	17.9	1000	"intron (NR_110196, intron 3 of 5)"	MIR|SINE|MIR	-20387	NR_037452	100500884		NR_037452	ENSG00000264089	MIR3681	-	microRNA 3681	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr2-1682	chr2	15886973	15887973	+	16.6	1000	Intergenic	Intergenic	56567	NR_110201	101926966	Hs.502835	NR_110201	ENSG00000231031	LINC01804	-	long intergenic non-protein coding RNA 1804	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr2-1683	chr2	16067001	16068289	+	19.2	1288	"intron (NR_125783, intron 2 of 2)"	MIRb|SINE|MIR	7124	NR_125783	103752554	Hs.269571	NR_125783	ENSG00000223850	MYCNUT	MYCNUN|lncUSMycN	MYCN upstream transcript (non-protein coding)	ncRNA	19.2	0.97	19.79381443	5.65E-15
chr2-1684	chr2	16071884	16072884	+	16.6	1000	"intron (NR_125783, intron 2 of 2)"	"intron (NR_125783, intron 2 of 2)"	-8176	NM_001293233	4613	Hs.25960	NM_005378	ENSG00000134323	MYCN	MODED|N-myc|NMYC|ODED|bHLHe37	v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr2-1687	chr2	20407248	20409270	+	36.5	2022	"intron (NM_001006946, intron 2 of 5)"	"intron (NM_001006946, intron 2 of 5)"	16668	NM_002997	6382	Hs.224607	NM_002997	ENSG00000115884	SDC1	CD138|SDC|SYND1|syndecan	syndecan 1	protein-coding	36.48	7.77	4.694980695	8.02E-11
chr2-1689	chr2	20731651	20734251	+	37.1	2600	Intergenic	Intergenic	59357	NR_046836	100874343	Hs.591546	NR_046836	ENSG00000231948	HS1BP3-IT1	-	HS1BP3 intronic transcript 1	ncRNA	37.12	4.37	8.494279176	1.21E-17
chr2-1694	chr2	23866253	23867818	+	32	1565	"intron (NM_052920, intron 5 of 13)"	"intron (NM_052920, intron 5 of 13)"	258737	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	32	4.85	6.597938144	5.03E-13
chr2-1695	chr2	23890489	23891760	+	18.6	1271	"intron (NM_052920, intron 5 of 13)"	"intron (NM_052920, intron 5 of 13)"	258860	NR_125717	54454	Hs.467862	NM_017552	ENSG00000119778	ATAD2B	-	"ATPase family, AAA domain containing 2B"	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr2-1697	chr2	26393056	26394056	+	16	1000	Intergenic	AluSz|SINE|Alu	-2404	NM_001168241	150946	Hs.187912	NM_001168241	ENSG00000157833	GAREM2	FAM59B|GAREML	GRB2 associated regulator of MAPK1 subtype 2	protein-coding	16	0.97	16.49484536	3.54E-11
chr2-1701	chr2	26923488	26924488	+	17.3	1000	"intron (NM_002246, intron 1 of 1)"	MER5A1|DNA|hAT-Charlie	8407	NM_002246	3777	Hs.24040	NM_002246	ENSG00000171303	KCNK3	K2p3.1|OAT1|PPH4|TASK|TASK-1|TBAK1	potassium two pore domain channel subfamily K member 3	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr2-1702	chr2	26952891	26953891	+	16.6	1000	"3' UTR (NM_002246, exon 2 of 2)"	"3' UTR (NM_002246, exon 2 of 2)"	-33751	NM_017877	54978	Hs.1594	NM_017877	ENSG00000213699	SLC35F6	ANT2BP|C2orf18|TANGO9	solute carrier family 35 member F6	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr2-1704	chr2	27127617	27128617	+	16.6	1000	"intron (NM_020134, intron 2 of 12)"	"intron (NM_020134, intron 2 of 12)"	56825	NM_001253724	56896	Hs.299315	NM_020134	ENSG00000157851	DPYSL5	CRAM|CRMP-5|CRMP5|Ulip6	dihydropyrimidinase like 5	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr2-1705	chr2	27396685	27397976	+	20.5	1291	Intergenic	L2|LINE|L2	25385	NM_175769	150921	Hs.591583	NM_175769	ENSG00000163792	TCF23	OUT|TCF-23|bHLHa24	transcription factor 23	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr2-1708	chr2	28747521	28750795	+	47.4	3274	"intron (NM_153021, intron 6 of 57)"	"intron (NM_153021, intron 6 of 57)"	30220	NM_153021	151056	Hs.444933	NM_153021	ENSG00000163803	PLB1	PLB|PLB/LIP	phospholipase B1	protein-coding	47.37	10.68	4.435393258	2.70E-13
chr2-1710	chr2	29431733	29432733	+	16	1000	"intron (NM_004304, intron 25 of 28)"	AluSp|SINE|Alu	93941	NM_024692	79745	Hs.122927	NM_024692	ENSG00000115295	CLIP4	RSNL2	CAP-Gly domain containing linker protein family member 4	protein-coding	16	1.94	8.24742268	7.67E-08
chr2-1713	chr2	30271820	30272820	+	16	1000	Intergenic	Intergenic	-97430	NM_001127400	51646	Hs.515890	NM_016061	ENSG00000119801	YPEL5	CGI-127	yippee like 5	protein-coding	16	2.91	5.498281787	4.98E-06
chr2-1714	chr2	30307610	30311316	+	56.3	3706	Intergenic	PABL_A|LTR|ERV1	-60287	NM_001127400	51646	Hs.515890	NM_016061	ENSG00000119801	YPEL5	CGI-127	yippee like 5	protein-coding	56.33	9.71	5.801235839	1.19E-19
chr2-1718	chr2	31357129	31361963	+	76.2	4834	"intron (NM_001253826, intron 1 of 15)"	"intron (NM_001253826, intron 1 of 15)"	2046	NM_001329095	79623	Hs.468058	NM_024572	ENSG00000158089	GALNT14	GALNT15|GalNac-T10|GalNac-T14	polypeptide N-acetylgalactosaminyltransferase 14	protein-coding	76.17	8.74	8.715102975	1.44E-34
chr2-1719	chr2	36583633	36585999	+	36.5	2366	"intron (NM_016441, intron 1 of 16)"	CpG	1446	NM_016441	51232	Hs.699247	NM_016441	ENSG00000150938	CRIM1	CRIM-1|S52	cysteine rich transmembrane BMP regulator 1	protein-coding	36.48	4.85	7.521649485	1.37E-15
chr2-1726	chr2	42284253	42287408	+	46.1	3155	TTS (NM_138370)	TTS (NM_138370)	10669	NM_138370	91461	Hs.408542	NM_138370	ENSG00000162878	PKDCC	SGK493|Vlk	"protein kinase domain containing, cytoplasmic"	protein-coding	46.09	4.37	10.54691076	1.51E-24
chr2-1733	chr2	45202425	45203425	+	14.7	1000	Intergenic	Intergenic	33617	NM_016932	10736	Hs.101937	NM_016932	ENSG00000170577	SIX2	-	SIX homeobox 2	protein-coding	14.72	0	15.16333034	3.99E-13
chr2-1734	chr2	45231082	45232360	+	22.4	1278	TTS (NM_016932)	TTS (NM_016932)	4821	NM_016932	10736	Hs.101937	NM_016932	ENSG00000170577	SIX2	-	SIX homeobox 2	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr2-1740	chr2	46017424	46018424	+	17.9	1000	"intron (NM_005400, intron 1 of 14)"	"intron (NM_005400, intron 1 of 14)"	138881	NM_005400	5581	Hs.580351	NM_005400	ENSG00000171132	PRKCE	PKCE|nPKC-epsilon	protein kinase C epsilon	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr2-1741	chr2	46092476	46093915	+	23.7	1439	"intron (NM_005400, intron 2 of 14)"	AluJb|SINE|Alu	214152	NM_005400	5581	Hs.580351	NM_005400	ENSG00000171132	PRKCE	PKCE|nPKC-epsilon	protein kinase C epsilon	protein-coding	23.68	3.4	6.964705882	5.45E-10
chr2-1743	chr2	46177651	46178651	+	16.6	1000	"intron (NM_005400, intron 2 of 14)"	"intron (NM_005400, intron 2 of 14)"	299108	NM_005400	5581	Hs.580351	NM_005400	ENSG00000171132	PRKCE	PKCE|nPKC-epsilon	protein kinase C epsilon	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr2-1744	chr2	46263140	46264140	+	17.3	1000	"intron (NM_005400, intron 10 of 14)"	AluJr|SINE|Alu	-260901	NM_001430	2034	Hs.468410	NM_001430	ENSG00000116016	EPAS1	ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73	endothelial PAS domain protein 1	protein-coding	17.28	1.46	11.83561644	2.99E-10
chr2-1748	chr2	46604311	46605574	+	19.2	1263	"intron (NM_001430, intron 9 of 15)"	"intron (NM_001430, intron 9 of 15)"	-51387	NR_103805	101805491	Hs.304781	NR_103805	ENSG00000187600	LOC101805491	-	uncharacterized LOC101805491	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr2-1751	chr2	48344922	48345922	+	16.6	1000	Intergenic	Intergenic	-196373	NM_002158	3344	Hs.468478	NM_002158	ENSG00000170802	FOXN2	HTLF	forkhead box N2	protein-coding	16.64	0.49	33.95918367	3.68E-16
chr2-1753	chr2	54682210	54683210	+	16.6	1000	promoter-TSS (NM_003128)	promoter-TSS (NM_003128)	-744	NM_003128	6711	Hs.503178	NM_003128	ENSG00000115306	SPTBN1	ELF|HEL102|SPTB2|betaSpII	"spectrin beta, non-erythrocytic 1"	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-1756	chr2	60807818	60809314	+	19.2	1496	Intergenic	Intergenic	-27933	NM_138559	53335	Hs.370549	NM_018014	ENSG00000119866	BCL11A	BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856	B-cell CLL/lymphoma 11A	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr2-1758	chr2	62016111	62018276	+	39.7	2165	Intergenic	AluJb|SINE|Alu	64085	NR_037710	84140	Hs.440466	NM_032180	ENSG00000170264	FAM161A	RP28	family with sequence similarity 161 member A	protein-coding	39.69	6.31	6.290015848	3.11E-15
chr2-1761	chr2	64582036	64583036	+	16	1000	Intergenic	Intergenic	-14554	NR_106995	102465833		NR_106995	ENSG00000264297	MIR4433B	hsa-mir-4433b	microRNA 4433b	ncRNA	16	3.88	4.12371134	7.91E-05
chr2-1763	chr2	64726529	64727862	+	21.1	1333	Intergenic	MSTB|LTR|ERVL-MaLR	24094	NR_136167	101927402	Hs.187018	NR_136167	ENSG00000260101	LOC101927402	-	uncharacterized LOC101927402	ncRNA	21.12	3.88	5.443298969	1.44E-07
chr2-1764	chr2	65085782	65088601	+	45.4	2819	"intron (NR_110224, intron 1 of 4)"	"intron (NR_110224, intron 1 of 4)"	3574	NR_110224	101927438	Hs.580313	NR_110224	ENSG00000234572	LINC01800	-	long intergenic non-protein coding RNA 1800	ncRNA	45.45	9.71	4.680741504	3.88E-13
chr2-1767	chr2	66918015	66919531	+	23	1516	"intron (NR_110156, intron 4 of 5)"	"intron (NR_110156, intron 4 of 5)"	11586	NR_110264	101927577	Hs.380543	NR_110264	ENSG00000237179	LINC01797	-	long intergenic non-protein coding RNA 1797	ncRNA	23.04	5.34	4.314606742	4.49E-07
chr2-1768	chr2	67739771	67740771	+	16.6	1000	Intergenic	Intergenic	115829	NM_019002	54465	Hs.353022	NM_019002	ENSG00000143971	ETAA1	ETAA16	Ewing tumor associated antigen 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-1769	chr2	68572289	68573289	+	17.3	1000	Intergenic	Intergenic	-19533	NM_002664	5341	Hs.468840	NM_002664	ENSG00000115956	PLEK	P47	pleckstrin	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr2-1770	chr2	68591032	68592304	+	21.1	1272	promoter-TSS (NM_002664)	promoter-TSS (NM_002664)	-654	NM_002664	5341	Hs.468840	NM_002664	ENSG00000115956	PLEK	P47	pleckstrin	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr2-1777	chr2	70885100	70886951	+	28.8	1851	Intergenic	AluSq4|SINE|Alu	-104878	NM_001099691	7039	Hs.170009	NM_003236	ENSG00000163235	TGFA	TFGA	transforming growth factor alpha	protein-coding	28.8	3.88	7.422680412	1.97E-12
chr2-1781	chr2	71792466	71793466	+	15.4	1000	"intron (NM_001130978, intron 24 of 55)"	MIR|SINE|MIR	99134	NM_001130987	8291	Hs.252180	NM_003494	ENSG00000135636	DYSF	FER1L1|LGMD2B|MMD1	dysferlin	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-1782	chr2	72175626	72176626	+	16.6	1000	Intergenic	Intergenic	198865	NM_001277742	56603	Hs.91546	NM_019885	ENSG00000003137	CYP26B1	CYP26A2|P450RAI-2|P450RAI2|RHFCA	cytochrome P450 family 26 subfamily B member 1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr2-1783	chr2	73114126	73115543	+	24.3	1417	"exon (NM_003124, exon 1 of 3)"	"exon (NM_003124, exon 1 of 3)"	322	NM_003124	6697	Hs.301540	NM_003124	ENSG00000116096	SPR	SDR38C1	"sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)"	protein-coding	24.32	2.43	10.00823045	2.59E-13
chr2-1789	chr2	73401905	73407153	+	77.4	5248	Intergenic	CpG	-24857	NM_001134462	344022	Hs.694384	NM_001134462	ENSG00000214513	NOTO	-	notochord homeobox	protein-coding	77.45	14.08	5.500710227	7.30E-25
chr2-1792	chr2	74566573	74567573	+	16.6	1000	"intron (NM_133478, intron 2 of 30)"	L1MB3|LINE|L1	3461	NM_133478	57835	Hs.594099	NM_021196	ENSG00000188687	SLC4A5	NBC4|NBCe2	solute carrier family 4 member 5	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr2-1794	chr2	74794509	74796058	+	25	1549	"intron (NM_001321739, intron 7 of 10)"	"intron (NM_001321739, intron 7 of 10)"	13996	NM_001318868	1796	Hs.103854	NM_001381	ENSG00000115325	DOK1	P62DOK|pp62	docking protein 1	protein-coding	24.96	5.34	4.674157303	9.72E-08
chr2-1798	chr2	75775334	75776334	+	16.6	1000	"intron (NM_032181, intron 1 of 3)"	L2c|LINE|L2	12258	NM_001135032	84141	Hs.302346	NM_032181	ENSG00000115363	EVA1A	FAM176A|TMEM166	"eva-1 homolog A, regulator of programmed cell death"	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-1799	chr2	75778880	75780218	+	19.8	1338	"intron (NM_032181, intron 1 of 3)"	L2b|LINE|L2	8543	NM_001135032	84141	Hs.302346	NM_032181	ENSG00000115363	EVA1A	FAM176A|TMEM166	"eva-1 homolog A, regulator of programmed cell death"	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr2-1800	chr2	79425406	79426406	+	17.3	1000	Intergenic	Intergenic	-39026	NM_138937	5068	Hs.567312	NM_002580	ENSG00000172016	REG3A	HIP|HIP/PAP|INGAP|PAP|PAP-H|PAP1|PBCGF|REG-III|REG3	regenerating family member 3 alpha	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr2-1802	chr2	80691266	80692266	+	17.3	1000	"intron (NM_001282597, intron 9 of 18)"	"intron (NM_001282597, intron 9 of 18)"	151262	NM_001282599	1496	Hs.167368	NM_004389	ENSG00000066032	CTNNA2	CAP-R|CAPR|CT114|CTNR	catenin alpha 2	protein-coding	17.28	1.46	11.83561644	2.99E-10
chr2-1803	chr2	85076000	85077000	+	16.6	1000	"intron (NM_001307978, intron 2 of 4)"	"intron (NM_001307978, intron 2 of 4)"	31869	NM_001307978	129293	Hs.469134	NM_001080824	ENSG00000186854	TRABD2A	C2orf89|TIKI1	TraB domain containing 2A	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-1806	chr2	85368250	85369250	+	15.4	1000	"intron (NM_031283, intron 3 of 11)"	"intron (NM_031283, intron 3 of 11)"	8167	NM_031283	83439	Hs.516297	NM_031283	ENSG00000152284	TCF7L1	TCF-3|TCF3	transcription factor 7 like 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-1808	chr2	85943763	85944763	+	16.6	1000	Intergenic	L1MA7|LINE|L1	22849	NM_006433	10578	Hs.105806	NM_006433	ENSG00000115523	GNLY	D2S69E|LAG-2|LAG2|NKG5|TLA519	granulysin	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr2-1810	chr2	85985818	85987081	+	19.2	1263	"intron (NM_032827, intron 1 of 2)"	"intron (NM_032827, intron 1 of 2)"	5540	NM_032827	84913	Hs.135569	NM_032827	ENSG00000168874	ATOH8	HATH6|bHLHa21	atonal bHLH transcription factor 8	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr2-1814	chr2	86528373	86529373	+	16.6	1000	"intron (NM_001164730, intron 1 of 6)"	"intron (NM_001164730, intron 1 of 6)"	35904	NM_022912	65055	Hs.368884	NM_022912	ENSG00000068615	REEP1	C2orf23|HMN5B|SPG31|Yip2a	receptor accessory protein 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-1817	chr2	86654304	86655304	+	16.6	1000	Intergenic	Intergenic	-13467	NM_018433	55818	Hs.557425	NM_018433	ENSG00000115548	KDM3A	JHDM2A|JHMD2A|JMJD1|JMJD1A|TSGA	lysine demethylase 3A	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr2-1835	chr2	97630862	97635065	+	69.8	4203	"intron (NM_001122646, intron 5 of 16)"	"intron (NM_001122646, intron 5 of 16)"	19338	NM_001122646	51252	Hs.107922	NM_016490	ENSG00000168754	FAM178B	-	family with sequence similarity 178 member B	protein-coding	69.77	12.13	5.751854905	2.22E-23
chr2-1841	chr2	98830907	98831907	+	17.3	1000	"intron (NM_001345864, intron 7 of 21)"	L1MC4a|LINE|L1	65449	NM_001345864	200403	Hs.269977	NM_144992	ENSG00000168658	VWA3B	SCAR22	von Willebrand factor A domain containing 3B	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr2-1842	chr2	99007001	99008001	+	16	1000	"intron (NM_001079878, intron 5 of 6)"	"intron (NM_001079878, intron 5 of 6)"	44883	NM_001298	1261	Hs.234785	NM_001298	ENSG00000144191	CNGA3	ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3	cyclic nucleotide gated channel alpha 3	protein-coding	16	0.49	32.65306122	1.26E-14
chr2-1845	chr2	101255832	101257698	+	30.1	1866	Intergenic	Intergenic	77347	NM_024065	79031	Hs.469459	NM_024065	ENSG00000115539	PDCL3	HTPHLP|PHLP2A|PHLP3|VIAF|VIAF1	phosducin like 3	protein-coding	30.08	5.82	5.16838488	6.85E-10
chr2-1852	chr2	102002547	102004533	+	39	1986	"exon (NM_153836, exon 1 of 4)"	"exon (NM_153836, exon 1 of 4)"	425	NM_153836	200407	Hs.732289	NM_153836	ENSG00000175874	CREG2	-	cellular repressor of E1A stimulated genes 2	protein-coding	39.04	6.8	5.741176471	1.26E-13
chr2-1856	chr2	102792952	102793952	+	16.6	1000	"3' UTR (NM_001288706, exon 12 of 12)"	"3' UTR (NM_001288706, exon 12 of 12)"	-9981	NM_003854	8808	Hs.659863	NM_003854	ENSG00000115598	IL1RL2	IL-1Rrp2|IL-36R|IL1R-rp2|IL1RRP2	interleukin 1 receptor like 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-1857	chr2	105517122	105518122	+	16	1000	Intergenic	Intergenic	-28569	NR_110373	102682016	Hs.638438	NR_110373	ENSG00000229743	LINC01159	linc-Brn1b	long intergenic non-protein coding RNA 1159	ncRNA	16	0	16.4818808	1.26E-14
chr2-1858	chr2	105567874	105568874	+	16	1000	"intron (NR_110603, intron 1 of 2)"	L1MB2|LINE|L1	-79321	NR_110373	102682016	Hs.638438	NR_110373	ENSG00000229743	LINC01159	linc-Brn1b	long intergenic non-protein coding RNA 1159	ncRNA	16	3.4	4.705882353	2.25E-05
chr2-1859	chr2	106015238	106016238	+	16	1000	promoter-TSS (NM_001318896)	promoter-TSS (NM_001318896)	-57	NM_001318895	2274	Hs.443687	NM_001450	ENSG00000115641	FHL2	AAG11|DRAL|FHL-2|SLIM-3|SLIM3	four and a half LIM domains 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr2-1861	chr2	109872269	109875067	+	39.7	2798	"intron (NM_001099289, intron 1 of 9)"	"intron (NM_001099289, intron 1 of 9)"	56413	NR_036224	100423027		NR_036224	ENSG00000265965	MIR4266	-	microRNA 4266	ncRNA	39.69	5.82	6.819587629	3.74E-16
chr2-1864	chr2	110918573	110920464	+	27.5	1891	"intron (NM_001128179, intron 7 of 17)"	"intron (NM_001128179, intron 7 of 17)"	43121	NM_001128179	4867	Hs.280388	NM_000272	ENSG00000144061	NPHP1	JBTS4|NPH1|SLSN1	nephrocystin 1	protein-coding	27.52	5.82	4.728522337	1.71E-08
chr2-1867	chr2	112711754	112713018	+	16.6	1264	"intron (NM_006343, intron 4 of 18)"	"intron (NM_006343, intron 4 of 18)"	56195	NM_006343	10461	Hs.306178	NM_006343	ENSG00000153208	MERTK	MER|RP38|Tyro12|c-Eyk|c-mer	"MER proto-oncogene, tyrosine kinase"	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-1872	chr2	119731175	119732175	+	16.6	1000	"intron (NM_006770, intron 4 of 16)"	MIRb|SINE|MIR	31930	NM_006770	8685	Hs.67726	NM_006770	ENSG00000019169	MARCO	SCARA2	macrophage receptor with collagenous structure	protein-coding	16.64	0.49	33.95918367	3.68E-16
chr2-1873	chr2	120008020	120010740	+	38.4	2720	"intron (NM_001008410, intron 3 of 4)"	L2b|LINE|L2	-2733	NR_046721	100874111	Hs.704682	NR_046721	ENSG00000229867	STEAP3-AS1	-	STEAP3 antisense RNA 1	ncRNA	38.4	7.77	4.942084942	3.34E-12
chr2-1879	chr2	121494732	121497760	+	48	3028	Intergenic	Intergenic	-58621	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding	48.01	6.8	7.060294118	2.78E-19
chr2-1882	chr2	121550875	121551875	+	16	1000	Intergenic	Intergenic	-3492	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-1883	chr2	121553667	121554667	+	16.6	1000	promoter-TSS (NM_005270)	promoter-TSS (NM_005270)	-700	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr2-1884	chr2	121687644	121690744	+	45.4	3100	"intron (NM_005270, intron 2 of 12)"	"intron (NM_005270, intron 2 of 12)"	134327	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding	45.45	8.74	5.200228833	2.02E-14
chr2-1887	chr2	121878415	121879415	+	16.6	1000	Intergenic	Intergenic	163863	NM_014553	29842	Hs.156471	NM_014553	ENSG00000115112	TFCP2L1	CRTR1|LBP-9|LBP9	transcription factor CP2 like 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr2-1889	chr2	121971901	121975157	+	46.7	3256	TTS (NM_014553)	TTS (NM_014553)	69249	NM_014553	29842	Hs.156471	NM_014553	ENSG00000115112	TFCP2L1	CRTR1|LBP-9|LBP9	transcription factor CP2 like 1	protein-coding	46.73	9.71	4.812564367	8.12E-14
chr2-1892	chr2	127862891	127867326	+	78.7	4435	promoter-TSS (NM_139348)	promoter-TSS (NM_139348)	-205	NM_139344	274	Hs.193163	NM_004305	ENSG00000136717	BIN1	AMPH2|AMPHL|SH3P9	bridging integrator 1	protein-coding	78.73	12.62	6.238510301	5.12E-28
chr2-1895	chr2	128429219	128434902	+	95.4	5683	"intron (NM_001136037, intron 1 of 10)"	"intron (NM_001136037, intron 1 of 10)"	704	NM_001161403	55679	Hs.469881	NM_017980	ENSG00000072163	LIMS2	LGMD2W|PINCH-2|PINCH2	LIM zinc finger domain containing 2	protein-coding	95.37	21.36	4.46488764	6.19E-25
chr2-1897	chr2	129368598	129369852	+	16.6	1254	Intergenic	Intergenic	-252949	NR_110278	101927881	Hs.570247	NR_110278		LOC101927881	-	uncharacterized LOC101927881	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr2-1898	chr2	130678150	130679150	+	16	1000	Intergenic	AluSg|SINE|Alu	-2100	NR_110285	101927924	Hs.570248	NR_110285	ENSG00000237574	LINC01856	-	long intergenic non-protein coding RNA 1856	ncRNA	16	3.4	4.705882353	2.25E-05
chr2-1899	chr2	131691972	131693688	+	28.2	1716	"intron (NM_015320, intron 3 of 13)"	AluJb|SINE|Alu	17860	NM_032995	50649	Hs.469935	NM_015320	ENSG00000136002	ARHGEF4	ASEF|ASEF1|GEF4|STM6	Rho guanine nucleotide exchange factor 4	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr2-1901	chr2	132183146	132184912	+	29.4	1766	Intergenic	LTR89|LTR|ERVL?	18438	NR_002826	401010	Hs.452369	NR_002826		NOC2LP2	-	NOC2 like nucleolar associated transcriptional repressor pseudogene 2	pseudo	29.44	4.85	6.070103093	2.13E-11
chr2-1905	chr2	135268421	135269421	+	16.6	1000	"intron (NM_030923, intron 4 of 7)"	L2a|LINE|L2	207650	NM_030923	81615	Hs.369471	NM_030923	ENSG00000152128	TMEM163	DC29|SV31	transmembrane protein 163	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-1906	chr2	135430278	135431278	+	16.6	1000	"intron (NM_030923, intron 2 of 7)"	Charlie4z|DNA|hAT-Charlie	45793	NM_030923	81615	Hs.369471	NM_030923	ENSG00000152128	TMEM163	DC29|SV31	transmembrane protein 163	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-1909	chr2	136830564	136831564	+	17.3	1000	Intergenic	HERVK3-int|LTR|ERVK	42749	NM_001008540	7852	Hs.593413	NM_003467	ENSG00000121966	CXCR4	CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS	C-X-C motif chemokine receptor 4	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr2-1910	chr2	137292016	137293016	+	17.3	1000	Intergenic	Intergenic	-230616	NM_001316349	80731	Hs.68533	NM_001080427	ENSG00000144229	THSD7B	-	thrombospondin type 1 domain containing 7B	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr2-1914	chr2	149861779	149862779	+	14.7	1000	"intron (NM_004522, intron 22 of 25)"	"intron (NM_004522, intron 22 of 25)"	-32702	NM_177964	130576	Hs.357567	NM_177964	ENSG00000150556	LYPD6B	CT116|LYPD7	LY6/PLAUR domain containing 6B	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-1921	chr2	170213875	170214875	+	16	1000	"intron (NM_004525, intron 1 of 78)"	"intron (NM_004525, intron 1 of 78)"	4747	NM_004525	4036	Hs.657729	NM_004525	ENSG00000081479	LRP2	DBS|GP330	LDL receptor related protein 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr2-1922	chr2	170217450	170219619	+	39	2169	"intron (NM_004525, intron 1 of 78)"	CpG	588	NM_004525	4036	Hs.657729	NM_004525	ENSG00000081479	LRP2	DBS|GP330	LDL receptor related protein 2	protein-coding	39.04	3.88	10.06185567	5.77E-20
chr2-1926	chr2	171322053	171323915	+	29.4	1862	"intron (NM_001083615, intron 24 of 33)"	"intron (NM_001083615, intron 24 of 33)"	-115531	NR_110576	101929753	Hs.534101	NR_110576		LOC101929753	-	uncharacterized LOC101929753	ncRNA	29.44	4.85	6.070103093	2.13E-11
chr2-1927	chr2	171432216	171433604	+	19.8	1388	"intron (NM_001083615, intron 31 of 33)"	LTR50|LTR|ERVL	138167	NR_027433	440925	Hs.668461	NM_001013712	ENSG00000222033	LINC01124	-	long intergenic non-protein coding RNA 1124	ncRNA	19.84	1.94	10.22680412	9.57E-11
chr2-1933	chr2	173598503	173599503	+	17.3	1000	"intron (NR_026995, intron 3 of 3)"	"intron (NR_026995, intron 3 of 3)"	-1522	NM_007023	11069	Hs.470646	NM_007023	ENSG00000091428	RAPGEF4	CAMP-GEFII|CGEF2|EPAC|EPAC 2|EPAC2|Nbla00496	Rap guanine nucleotide exchange factor 4	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr2-1940	chr2	176946533	176947791	+	19.8	1258	"exon (NM_001080458, exon 2 of 3)"	"exon (NM_001080458, exon 2 of 3)"	1528	NM_001080458	344191	Hs.452341	NM_001080458	ENSG00000174279	EVX2	EVX-2	even-skipped homeobox 2	protein-coding	19.84	1.46	13.5890411	1.82E-12
chr2-1950	chr2	177768971	177769971	+	16.6	1000	Intergenic	Intergenic	266989	NR_110599	102724224	Hs.663125	NR_110599	ENSG00000224577	LINC01117	-	long intergenic non-protein coding RNA 1117	ncRNA	16.64	0	17.14115603	3.68E-16
chr2-1951	chr2	178775699	178776699	+	16.6	1000	"intron (NM_001077197, intron 3 of 20)"	"intron (NM_001077197, intron 3 of 20)"	11365	NM_001077358	50940	Hs.570273	NM_016953	ENSG00000128655	PDE11A	PPNAD2	phosphodiesterase 11A	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr2-196	chr2	86505970	86507227	+	25	1257	"intron (NM_001164731, intron 1 of 5)"	MLT1D|LTR|ERVL-MaLR	58179	NM_022912	65055	Hs.368884	NM_022912	ENSG00000068615	REEP1	C2orf23|HMN5B|SPG31|Yip2a	receptor accessory protein 1	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr2-1960	chr2	206478347	206479696	+	19.2	1349	"intron (NM_205863, intron 21 of 21)"	"intron (NM_205863, intron 21 of 21)"	-68203	NM_201266	8828	Hs.471200	NM_003872	ENSG00000118257	NRP2	NP2|NPN2|PRO2714|VEGF165R2	neuropilin 2	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr2-1962	chr2	206620027	206621027	+	16	1000	"intron (NM_018534, intron 12 of 15)"	"intron (NM_018534, intron 12 of 15)"	73303	NM_201264	8828	Hs.471200	NM_003872	ENSG00000118257	NRP2	NP2|NPN2|PRO2714|VEGF165R2	neuropilin 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr2-1963	chr2	206713783	206714783	+	16.6	1000	Intergenic	Intergenic	167059	NM_201264	8828	Hs.471200	NM_003872	ENSG00000118257	NRP2	NP2|NPN2|PRO2714|VEGF165R2	neuropilin 2	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr2-1964	chr2	207306257	207308090	+	28.2	1833	Intergenic	Intergenic	-1195	NM_003812	8745	Hs.370287	NM_003812	ENSG00000114948	ADAM23	MDC-3|MDC3	ADAM metallopeptidase domain 23	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr2-1967	chr2	207397078	207398078	+	16.6	1000	"intron (NM_003812, intron 4 of 25)"	L1ME4a|LINE|L1	89210	NM_003812	8745	Hs.370287	NM_003812	ENSG00000114948	ADAM23	MDC-3|MDC3	ADAM metallopeptidase domain 23	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-1970	chr2	207894634	207895634	+	16.6	1000	Intergenic	L1MA5|LINE|L1	79663	NR_036227	100423036		NR_036227	ENSG00000253008	MIR2355	mir-2355	microRNA 2355	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr2-1972	chr2	216299771	216302097	+	33.3	2326	promoter-TSS (NM_002026)	promoter-TSS (NM_002026)	-141	NM_001306129	2335	Hs.203717	NM_002026	ENSG00000115414	FN1	CIG|ED-B|FINC|FN|FNZ|GFND|GFND2|LETS|MSF	fibronectin 1	protein-coding	33.28	3.88	8.577319588	4.55E-16
chr2-1973	chr2	216534509	216535509	+	16	1000	"intron (NR_037195, intron 5 of 9)"	"intron (NR_037195, intron 5 of 9)"	-47757	NR_132383	105373869	Hs.152812	NR_132383		LINC01614	LCAL4	long intergenic non-protein coding RNA 1614	ncRNA	16	3.88	4.12371134	7.91E-05
chr2-1974	chr2	216547934	216548934	+	19.2	1000	"intron (NR_037195, intron 5 of 9)"	"intron (NR_037195, intron 5 of 9)"	-34332	NR_132383	105373869	Hs.152812	NR_132383		LINC01614	LCAL4	long intergenic non-protein coding RNA 1614	ncRNA	19.2	4.37	4.393592677	3.16E-06
chr2-1975	chr2	217196836	217197836	+	16.6	1000	"intron (NM_020814, intron 1 of 3)"	L1MEg|LINE|L1	39414	NM_020814	57574	Hs.170388	NM_020814	ENSG00000144583	4-Mar	MARCH-IV|RNF174	membrane associated ring-CH-type finger 4	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-1978	chr2	217691427	217692719	+	22.4	1292	Intergenic	Intergenic	32709	NM_003284	7141	Hs.3017	NM_003284	ENSG00000118245	TNP1	TP1	transition protein 1	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr2-1979	chr2	217789941	217790941	+	16.6	1000	Intergenic	L1MB5|LINE|L1	54946	NR_130782	101928327	Hs.350698	NR_130782	ENSG00000223874	LINC01921	-	long intergenic non-protein coding RNA 1921	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr2-1981	chr2	217874967	217875967	+	16	1000	Intergenic	LTR33|LTR|ERVL	139972	NR_130782	101928327	Hs.350698	NR_130782	ENSG00000223874	LINC01921	-	long intergenic non-protein coding RNA 1921	ncRNA	16	2.91	5.498281787	4.98E-06
chr2-1982	chr2	218563264	218566117	+	36.5	2853	"intron (NR_026597, intron 1 of 12)"	"intron (NR_026597, intron 1 of 12)"	56626	NR_026597	729582	Hs.572788	NR_026597		DIRC3	-	disrupted in renal carcinoma 3	ncRNA	36.48	6.8	5.364705882	3.95E-12
chr2-1984	chr2	218721559	218722559	+	15.4	1000	"intron (NM_001308023, intron 15 of 29)"	MIR3|SINE|MIR	43292	NR_106867	102465485		NR_106867	ENSG00000275458	MIR6809	hsa-mir-6809	microRNA 6809	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr2-1985	chr2	218815919	218816919	+	16	1000	Intergenic	Intergenic	-7623	NM_022648	7145	Hs.471381	NM_022648	ENSG00000079308	TNS1	MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS	tensin 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr2-1989	chr2	219845717	219849801	+	76.2	4084	"intron (NM_017521, intron 2 of 2)"	"intron (NM_017521, intron 2 of 2)"	2620	NM_017521	54738	Hs.234759	NM_017521	ENSG00000163497	FEV	HSRNAFEV|PET-1	"FEV, ETS transcription factor"	protein-coding	76.17	15.53	4.90470058	4.37E-22
chr2-1993	chr2	220436326	220437326	+	15.4	1000	promoter-TSS (NM_001173408)	promoter-TSS (NM_001173408)	-128	NM_002191	3623	Hs.407506	NM_002191	ENSG00000123999	INHA	-	inhibin alpha subunit	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-1994	chr2	220532664	220534703	+	33.9	2039	Intergenic	Intergenic	41391	NR_048551	6508	Hs.1176	NM_005070	ENSG00000114923	SLC4A3	AE3|CAE3/BAE3|SLC2C	solute carrier family 4 member 3	protein-coding	33.92	5.82	5.828178694	4.04E-12
chr2-1997	chr2	223104098	223106622	+	35.8	2524	"intron (NM_181457, intron 4 of 7)"	"intron (NM_181457, intron 4 of 7)"	-57506	NM_153038	151278	Hs.350729	NM_153038	ENSG00000163081	CCDC140	-	coiled-coil domain containing 140	protein-coding	35.84	3.88	9.237113402	5.49E-18
chr2-20	chr2	54935250	54937079	+	48.6	1829	Intergenic	MER52D|LTR|ERV1	-15985	NM_001039753	400954	Hs.656692	NM_001039753	ENSG00000214595	EML6	-	echinoderm microtubule associated protein like 6	protein-coding	48.65	5.82	8.359106529	2.31E-22
chr2-2000	chr2	227980137	227981676	+	24.3	1539	"intron (NM_000092, intron 7 of 47)"	LOR1b|LTR|ERV1	48369	NM_000092	1286	Hs.591645	NM_000092	ENSG00000081052	COL4A4	CA44	collagen type IV alpha 4 chain	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr2-2001	chr2	228027832	228029150	+	19.2	1318	promoter-TSS (NM_000091)	promoter-TSS (NM_000091)	784	NM_000092	1286	Hs.591645	NM_000092	ENSG00000081052	COL4A4	CA44	collagen type IV alpha 4 chain	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr2-2002	chr2	228999205	229000205	+	16.6	1000	"intron (NM_001142644, intron 1 of 11)"	"intron (NM_001142644, intron 1 of 11)"	46656	NM_001142644	80309	Hs.436306	NM_030623	ENSG00000153820	SPHKAP	SKIP	"SPHK1 interactor, AKAP domain containing"	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr2-2005	chr2	231912274	231914175	+	33.9	1901	"3' UTR (NM_001144994, exon 3 of 3)"	"3' UTR (NM_001144994, exon 3 of 3)"	-8354	NM_001191037	5707	Hs.3887	NM_002807	ENSG00000173692	PSMD1	P112|Rpn2|S1	"proteasome 26S subunit, non-ATPase 1"	protein-coding	33.92	4.85	6.993814433	7.28E-14
chr2-2011	chr2	234893447	234897444	+	53.8	3997	"intron (NM_024080, intron 21 of 25)"	L1ME4a|LINE|L1	-63901	NM_006944	6694	Hs.444488	NM_006944	ENSG00000072080	SPP2	SPP-24|SPP24	secreted phosphoprotein 2	protein-coding	53.77	7.28	7.385989011	1.41E-22
chr2-2014	chr2	235034858	235035858	+	15.4	1000	Intergenic	Intergenic	76012	NM_006944	6694	Hs.444488	NM_006944	ENSG00000072080	SPP2	SPP-24|SPP24	secreted phosphoprotein 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr2-2020	chr2	235716608	235717886	+	19.2	1278	Intergenic	AluJb|SINE|Alu	125935	NR_132376	106144537	Hs.580616	NR_132376	ENSG00000280744	LINC01173	-	long intergenic non-protein coding RNA 1173	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr2-2022	chr2	235932379	235934145	+	27.5	1766	"intron (NM_014521, intron 2 of 5)"	"intron (NM_014521, intron 2 of 5)"	72634	NM_014521	23677	Hs.516777	NM_014521	ENSG00000130147	SH3BP4	BOG25|TTP	SH3 domain binding protein 4	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr2-2026	chr2	236665377	236666633	+	17.9	1256	"intron (NM_001037131, intron 6 of 17)"	"intron (NM_001037131, intron 6 of 17)"	251610	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	17.92	2.43	7.374485597	1.53E-08
chr2-2029	chr2	236857745	236858745	+	16.6	1000	"intron (NM_001037131, intron 12 of 17)"	Tigger8|DNA|TcMar-Tigger	218407	NM_001485	2637	Hs.184945	NM_001485	ENSG00000168505	GBX2	-	gastrulation brain homeobox 2	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr2-2030	chr2	236961390	236962390	+	17.3	1000	"intron (NM_001037131, intron 16 of 17)"	"intron (NM_001037131, intron 16 of 17)"	114762	NM_001485	2637	Hs.184945	NM_001485	ENSG00000168505	GBX2	-	gastrulation brain homeobox 2	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr2-2032	chr2	237239865	237240865	+	16.6	1000	"intron (NM_024726, intron 17 of 18)"	"intron (NM_024726, intron 17 of 18)"	-67377	NM_212556	401036	Hs.639909	NM_212556	ENSG00000182177	ASB18	ASB-18	ankyrin repeat and SOCS box containing 18	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr2-2036	chr2	237621110	237622370	+	18.6	1260	Intergenic	MER113|DNA|hAT-Charlie	143360	NM_020311	57007	Hs.471751	NM_020311	ENSG00000144476	ACKR3	CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1	atypical chemokine receptor 3	protein-coding	18.56	1.46	12.71232877	2.41E-11
chr2-2037	chr2	237680020	237681020	+	16.6	1000	Intergenic	Intergenic	202140	NM_020311	57007	Hs.471751	NM_020311	ENSG00000144476	ACKR3	CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1	atypical chemokine receptor 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr2-2039	chr2	237868141	237869141	+	16.6	1000	Intergenic	Intergenic	96169	NR_135202	93463	Hs.652810	NR_135202	ENSG00000124835	LOC93463	-	uncharacterized LOC93463	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr2-2044	chr2	238460034	238461034	+	17.3	1000	"intron (NR_104019, intron 15 of 16)"	AluSz|SINE|Alu	-14683	NM_015893	51052	Hs.247710	NM_015893	ENSG00000071677	PRLH	PRH|PRRP	prolactin releasing hormone	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr2-2047	chr2	239208953	239210236	+	23.7	1283	Intergenic	L4|LINE|RTE	-12387	NM_022817	8864	Hs.58756	NM_003894	ENSG00000132326	PER2	FASPS|FASPS1	period circadian clock 2	protein-coding	23.68	4.37	5.418764302	2.46E-08
chr2-2049	chr2	239466914	239468308	+	19.8	1394	Intergenic	Intergenic	-3471	NR_037809	151171	Hs.652076	NR_037809	ENSG00000225493	LINC01107	-	long intergenic non-protein coding RNA 1107	ncRNA	19.84	4.85	4.090721649	1.08E-05
chr2-2050	chr2	239576020	239577020	+	17.3	1000	Intergenic	Intergenic	-112380	NR_037809	151171	Hs.652076	NR_037809	ENSG00000225493	LINC01107	-	long intergenic non-protein coding RNA 1107	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr2-2053	chr2	239906653	239907653	+	16.6	1000	Intergenic	Intergenic	-59188	NR_034162	401039	Hs.516791	NM_001001698	ENSG00000227744	LINC01940	-	long intergenic non-protein coding RNA 1940	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr2-2055	chr2	240971386	240972386	+	16.6	1000	Intergenic	Intergenic	-2040	NM_001005853	389090	Hs.531343	NM_001005853	ENSG00000182083	OR6B2	OR2-1|OR6B2P	olfactory receptor family 6 subfamily B member 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-2059	chr2	241257136	241258136	+	16.6	1000	Intergenic	MSTA|LTR|ERVL-MaLR	-117479	NM_002081	2817	Hs.328232	NM_002081	ENSG00000063660	GPC1	glypican	glypican 1	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr2-2061	chr2	241279868	241280868	+	16.6	1000	Intergenic	Intergenic	-94747	NM_002081	2817	Hs.328232	NM_002081	ENSG00000063660	GPC1	glypican	glypican 1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr2-2062	chr2	241307403	241311076	+	48.6	3673	Intergenic	Intergenic	-65876	NM_002081	2817	Hs.328232	NM_002081	ENSG00000063660	GPC1	glypican	glypican 1	protein-coding	48.65	9.22	5.276572668	6.74E-16
chr2-2063	chr2	241342844	241346051	+	42.9	3207	Intergenic	Intergenic	-30668	NM_002081	2817	Hs.328232	NM_002081	ENSG00000063660	GPC1	glypican	glypican 1	protein-coding	42.89	8.74	4.907322654	5.23E-13
chr2-2065	chr2	241387930	241391752	+	60.8	3822	"non-coding (NR_024014, exon 2 of 2)"	"non-coding (NR_024014, exon 2 of 2)"	-5577	NR_029702	406941		NR_029702	ENSG00000207611	MIR149	MIRN149|mir-149	microRNA 149	ncRNA	60.81	9.22	6.595444685	6.84E-23
chr2-2069	chr2	241810021	241811400	+	19.8	1379	"intron (NM_000030, intron 3 of 10)"	"intron (NM_000030, intron 3 of 10)"	2548	NM_000030	189	Hs.144567	NM_000030	ENSG00000172482	AGXT	AGT|AGT1|AGXT1|PH1|SPAT|SPT|TLH6	alanine-glyoxylate aminotransferase	protein-coding	19.84	1.46	13.5890411	1.82E-12
chr2-2071	chr2	241909911	241910911	+	16.6	1000	Intergenic	MLT1E3|LTR|ERVL-MaLR	-3543	NR_033841	200772	Hs.647893	NR_033841	ENSG00000233392	LOC200772	-	uncharacterized LOC200772	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr2-2073	chr2	882111	883111	+	16	1000	Intergenic	Intergenic	-18499	NR_111963	339822	Hs.651879	NR_033880	ENSG00000237667	LINC01115	-	long intergenic non-protein coding RNA 1115	ncRNA	16	3.88	4.12371134	7.91E-05
chr2-2075	chr2	1374769	1375769	+	16	1000	Intergenic	Intergenic	-41964	NM_001206744	7173	Hs.467554	NM_000547	ENSG00000115705	TPO	MSA|TDH2A|TPX	thyroid peroxidase	protein-coding	16	2.43	6.58436214	7.90E-07
chr2-2076	chr2	1546572	1547572	+	14.1	1000	TTS (NM_175719)	TTS (NM_175719)	128892	NM_175721	7173	Hs.467554	NM_000547	ENSG00000115705	TPO	MSA|TDH2A|TPX	thyroid peroxidase	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr2-2083	chr2	2256174	2257756	+	23.7	1582	"intron (NM_001329845, intron 2 of 24)"	"intron (NM_001329845, intron 2 of 24)"	-66039	NR_024468	730811	Hs.629472	NR_024468	ENSG00000225619	MYT1L-AS1	-	MYT1L antisense RNA 1	ncRNA	23.68	3.88	6.103092784	4.22E-09
chr2-2089	chr2	2468559	2469559	+	16.6	1000	Intergenic	Intergenic	-133974	NM_015025	23040	Hs.434418	NM_015025	ENSG00000186487	MYT1L	MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L	myelin transcription factor 1 like	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr2-2092	chr2	2704789	2705789	+	15.4	1000	Intergenic	Intergenic	-370204	NM_015025	23040	Hs.434418	NM_015025	ENSG00000186487	MYT1L	MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L	myelin transcription factor 1 like	protein-coding	15.36	0	15.82260557	1.26E-14
chr2-2093	chr2	2713124	2714124	+	15.4	1000	Intergenic	Intergenic	-378539	NM_015025	23040	Hs.434418	NM_015025	ENSG00000186487	MYT1L	MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L	myelin transcription factor 1 like	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-2094	chr2	2809750	2810750	+	16	1000	Intergenic	L1ME4a|LINE|L1	319548	NR_110228	101927554	Hs.638446	NR_110228	ENSG00000234423	LINC01250	-	long intergenic non-protein coding RNA 1250	ncRNA	16	1.46	10.95890411	3.44E-09
chr2-2095	chr2	2880245	2881245	+	16.6	1000	Intergenic	Intergenic	249053	NR_110228	101927554	Hs.638446	NR_110228	ENSG00000234423	LINC01250	-	long intergenic non-protein coding RNA 1250	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr2-2097	chr2	3100311	3101311	+	15.4	1000	"intron (NR_110228, intron 3 of 6)"	L1ME3C|LINE|L1	28987	NR_110228	101927554	Hs.638446	NR_110228	ENSG00000234423	LINC01250	-	long intergenic non-protein coding RNA 1250	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr2-2098	chr2	3960811	3961811	+	16	1000	Intergenic	Intergenic	60311	NR_037881	100505964	Hs.190267	NR_037881	ENSG00000237401	LINC01304	-	long intergenic non-protein coding RNA 1304	ncRNA	16	3.4	4.705882353	2.25E-05
chr2-210	chr2	134533914	134535739	+	39.7	1825	Intergenic	Intergenic	-208795	NM_207363	344148	Hs.537329	NM_207363	ENSG00000176771	NCKAP5	ERIH1|ERIH2|NAP5	NCK associated protein 5	protein-coding	39.69	5.82	6.819587629	3.74E-16
chr2-2100	chr2	6913790	6914790	+	16	1000	Intergenic	Intergenic	-3848	NR_038369	400941	Hs.446195	NM_001001695	ENSG00000205837	LINC00487	-	long intergenic non-protein coding RNA 487	ncRNA	16	3.4	4.705882353	2.25E-05
chr2-2107	chr2	8708948	8709948	+	14.7	1000	"intron (NR_110257, intron 5 of 5)"	G-rich|Low_complexity|Low_complexity	14474	NR_110257	101929567	Hs.634706	NR_110257	ENSG00000236008	LINC01814	-	long intergenic non-protein coding RNA 1814	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr2-2108	chr2	8776141	8777644	+	23	1503	Intergenic	Intergenic	45099	NR_110153	100506299	Hs.439031	NR_110153	ENSG00000235092	ID2-AS1	-	ID2 antisense RNA 1 (head to head)	ncRNA	23.04	1.94	11.87628866	6.71E-14
chr2-2109	chr2	8782115	8783115	+	14.7	1000	Intergenic	Intergenic	39376	NR_110153	100506299	Hs.439031	NR_110153	ENSG00000235092	ID2-AS1	-	ID2 antisense RNA 1 (head to head)	ncRNA	14.72	0.49	30.04081633	3.99E-13
chr2-211	chr2	136805793	136808124	+	51.2	2331	Intergenic	Intergenic	-63704	NM_001293312	1615	Hs.503787	NM_001349	ENSG00000115866	DARS	HBSL|aspRS	aspartyl-tRNA synthetase	protein-coding	51.21	12.62	4.057844691	4.76E-13
chr2-2110	chr2	8822422	8823422	+	16	1000	promoter-TSS (NR_110154)	promoter-TSS (NR_110154)	809	NM_002166	3398	Hs.180919	NM_002166	ENSG00000115738	ID2	GIG8|ID2A|ID2H|bHLHb26	"inhibitor of DNA binding 2, HLH protein"	protein-coding	16	1.46	10.95890411	3.44E-09
chr2-2112	chr2	9171035	9172035	+	16.6	1000	Intergenic	Intergenic	-27656	NR_135604	129642	Hs.467634	NM_138799	ENSG00000143797	MBOAT2	LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2	membrane bound O-acyltransferase domain containing 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr2-2116	chr2	9366941	9367941	+	16	1000	"intron (NM_001135191, intron 1 of 26)"	"intron (NM_001135191, intron 1 of 26)"	20547	NM_003887	8853	Hs.555902	NM_003887	ENSG00000151693	ASAP2	AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 2"	protein-coding	16	1.94	8.24742268	7.67E-08
chr2-2117	chr2	9377625	9378625	+	16.6	1000	"intron (NM_001135191, intron 1 of 26)"	"intron (NM_001135191, intron 1 of 26)"	31231	NM_003887	8853	Hs.555902	NM_003887	ENSG00000151693	ASAP2	AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 2"	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr2-2118	chr2	9398618	9399618	+	16.6	1000	"intron (NM_001135191, intron 1 of 26)"	"intron (NM_001135191, intron 1 of 26)"	52224	NM_003887	8853	Hs.555902	NM_003887	ENSG00000151693	ASAP2	AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 2"	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr2-2125	chr2	9908659	9909659	+	16.6	1000	Intergenic	Intergenic	-74412	NM_001318977	9014	Hs.584833	NM_005680	ENSG00000115750	TAF1B	MGC:9349|RAF1B|RAFI63|SL1|TAFI63	"TATA-box binding protein associated factor, RNA polymerase I subunit B"	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr2-2127	chr2	9936773	9938131	+	22.4	1358	Intergenic	MER115|DNA|hAT-Tip100	-46119	NM_001318977	9014	Hs.584833	NM_005680	ENSG00000115750	TAF1B	MGC:9349|RAF1B|RAFI63|SL1|TAFI63	"TATA-box binding protein associated factor, RNA polymerase I subunit B"	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr2-2131	chr2	10178188	10181456	+	55	3268	Intergenic	L1MC4a|LINE|L1	3706	NR_135558	101929882	Hs.405158	NR_135558		LOC101929882	-	uncharacterized LOC101929882	ncRNA	55.05	9.71	5.669412976	6.93E-19
chr2-2140	chr2	10468619	10469619	+	16.6	1000	"intron (NM_134421, intron 1 of 5)"	FLAM_C|SINE|Alu	-1170	NM_001258357	3241	Hs.580427	NM_002149	ENSG00000115756	HPCAL1	BDR1|HLP2|VILIP-3	hippocalcin like 1	protein-coding	16.64	0.49	33.95918367	3.68E-16
chr2-2142	chr2	10636582	10637582	+	16.6	1000	Intergenic	Intergenic	47228	NR_110597	101929715	Hs.634550	NR_110597		LOC101929715	-	uncharacterized LOC101929715	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr2-2144	chr2	10864989	10865989	+	16	1000	"intron (NM_144583, intron 2 of 12)"	AluSz|SINE|Alu	3714	NM_144583	245973	Hs.580464	NM_144583	ENSG00000143882	ATP6V1C2	ATP6C2|VMA5	ATPase H+ transporting V1 subunit C2	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-2149	chr2	11034567	11035567	+	15.4	1000	Intergenic	Intergenic	16674	NR_110575	101929733	Hs.736697	NR_110575	ENSG00000271952	LINC01954	-	long intergenic non-protein coding RNA 1954	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr2-2150	chr2	11292106	11293106	+	16	1000	Intergenic	LTR8|LTR|ERV1	-2892	NM_152391	130814	Hs.274415	NM_152391	ENSG00000162976	PQLC3	C2orf22	PQ loop repeat containing 3	protein-coding	16	3.4	4.705882353	2.25E-05
chr2-2151	chr2	11818386	11819788	+	21.1	1402	"intron (NM_001261428, intron 1 of 21)"	"intron (NM_001261428, intron 1 of 21)"	1382	NM_001261428	23175	Hs.467740	NM_145693	ENSG00000134324	LPIN1	PAP1	lipin 1	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr2-2152	chr2	12194475	12195475	+	16.6	1000	"intron (NR_110196, intron 2 of 5)"	"intron (NR_110196, intron 2 of 5)"	47733	NR_110196	100506457	Hs.197824	NR_110196	ENSG00000224184	MIR3681HG	-	MIR3681 host gene	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr2-2153	chr2	12854335	12855335	+	16	1000	Intergenic	Intergenic	-2163	NR_027303	28951	Hs.467751	NM_021643	ENSG00000071575	TRIB2	C5FW|GS3955|TRB2	tribbles pseudokinase 2	protein-coding	16	1.46	10.95890411	3.44E-09
chr2-2159	chr2	16076655	16077938	+	16	1283	"non-coding (NR_110230, exon 4 of 4)"	"non-coding (NR_110230, exon 4 of 4)"	-3264	NM_001293233	4613	Hs.25960	NM_005378	ENSG00000134323	MYCN	MODED|N-myc|NMYC|ODED|bHLHe37	v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog	protein-coding	16	0.97	16.49484536	3.54E-11
chr2-2162	chr2	16080752	16082058	+	18.6	1306	"intron (NM_001329968, intron 1 of 2)"	CpG	440	NM_006316	10408	Hs.651453	NM_006316	ENSG00000233718	MYCNOS	MYCN-AS1|N-CYM|NCYM|NYCM	MYCN opposite strand	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr2-2165	chr2	16405357	16406357	+	14.7	1000	Intergenic	MIRb|SINE|MIR	215308	NR_126559	104797537	Hs.435748	NR_126559	ENSG00000236289	GACAT3	LINC01458|lncRNA-AC130710	gastric cancer associated transcript 3 (non-protein coding)	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr2-2166	chr2	16735574	16736881	+	19.8	1307	"intron (NM_030797, intron 11 of 11)"	MIRb|SINE|MIR	110907	NM_030797	81553	Hs.467769	NM_030797	ENSG00000197872	FAM49A	-	family with sequence similarity 49 member A	protein-coding	19.84	1.46	13.5890411	1.82E-12
chr2-2168	chr2	16937205	16938205	+	16.6	1000	Intergenic	Intergenic	-90571	NM_030797	81553	Hs.467769	NM_030797	ENSG00000197872	FAM49A	-	family with sequence similarity 49 member A	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr2-2169	chr2	19932968	19933968	+	16	1000	Intergenic	Intergenic	-135147	NR_033875	400946	Hs.289062	NR_033875	ENSG00000228784	LINC00954	-	long intergenic non-protein coding RNA 954	ncRNA	16	3.4	4.705882353	2.25E-05
chr2-217	chr2	233285239	233286506	+	26.9	1267	Intergenic	CpG	14320	NM_031313	251	Hs.333509	NM_031313	ENSG00000163286	ALPPL2	ALPG|ALPPL|GCAP	"alkaline phosphatase, placental like 2"	protein-coding	26.88	4.37	6.151029748	1.19E-10
chr2-2170	chr2	20053872	20054872	+	16.6	1000	Intergenic	Intergenic	-14243	NR_033875	400946	Hs.289062	NR_033875	ENSG00000228784	LINC00954	-	long intergenic non-protein coding RNA 954	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr2-2171	chr2	20162458	20163458	+	16	1000	"intron (NM_001006657, intron 10 of 27)"	HAL1|LINE|L1	26926	NM_001006657	57539	Hs.205427	NM_020779	ENSG00000118965	WDR35	CED2|IFT121|IFTA1|SRTD7	WD repeat domain 35	protein-coding	16	0.97	16.49484536	3.54E-11
chr2-2177	chr2	20587952	20589477	+	23	1525	Intergenic	LTR47B|LTR|ERVL	-38103	NM_015317	23369	Hs.467824	NM_015317	ENSG00000055917	PUM2	PUMH2|PUML2	pumilio RNA binding family member 2	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr2-2179	chr2	20598710	20599710	+	15.4	1000	Intergenic	Intergenic	-47622	NM_004040	388	Hs.502876	NM_004040	ENSG00000143878	RHOB	ARH6|ARHB|MST081|MSTP081|RHOH6	ras homolog family member B	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-2181	chr2	21140295	21141295	+	16.6	1000	Intergenic	MIRb|SINE|MIR	-117905	NM_001282722	60526	Hs.187823	NM_021925	ENSG00000118961	LDAH	C2orf43|hLDAH	lipid droplet associated hydrolase	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr2-2186	chr2	23730429	23731429	+	14.7	1000	"intron (NM_052920, intron 2 of 13)"	"intron (NM_052920, intron 2 of 13)"	122631	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-2187	chr2	23760394	23761678	+	22.4	1284	"intron (NM_052920, intron 2 of 13)"	MIRc|SINE|MIR	152738	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr2-2188	chr2	23808150	23811596	+	48	3446	"intron (NM_052920, intron 3 of 13)"	"intron (NM_052920, intron 3 of 13)"	201575	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	48.01	8.74	5.493135011	6.98E-16
chr2-2190	chr2	23857890	23858890	+	16	1000	"intron (NM_052920, intron 3 of 13)"	"intron (NM_052920, intron 3 of 13)"	250092	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	16	0.97	16.49484536	3.54E-11
chr2-2193	chr2	26784017	26787042	+	57	3025	"exon (NM_001105519, exon 1 of 4)"	"exon (NM_001105519, exon 1 of 4)"	102	NM_001105519	339778	Hs.407083	NM_001105519	ENSG00000173557	C2orf70	-	chromosome 2 open reading frame 70	protein-coding	56.97	5.82	9.788659794	3.96E-28
chr2-2196	chr2	26793929	26796336	+	45.4	2407	"intron (NM_001322426, intron 2 of 4)"	L1ME4a|LINE|L1	9705	NM_001105519	339778	Hs.407083	NM_001105519	ENSG00000173557	C2orf70	-	chromosome 2 open reading frame 70	protein-coding	45.45	9.71	4.680741504	3.88E-13
chr2-2197	chr2	26853833	26858766	+	75.5	4933	"intron (NM_001029881, intron 2 of 6)"	"intron (NM_001029881, intron 2 of 6)"	7937	NM_001029881	130106	Hs.591579	NM_001029881	ENSG00000157884	CIB4	KIP4	calcium and integrin binding family member 4	protein-coding	75.53	16.02	4.714731586	1.85E-21
chr2-220	chr2	20402169	20404081	+	35.8	1912	"intron (NM_001006946, intron 4 of 5)"	"intron (NM_001006946, intron 4 of 5)"	21802	NM_002997	6382	Hs.224607	NM_002997	ENSG00000115884	SDC1	CD138|SDC|SYND1|syndecan	syndecan 1	protein-coding	35.84	3.88	9.237113402	5.49E-18
chr2-2201	chr2	26891274	26892274	+	16.6	1000	Intergenic	Intergenic	-23807	NM_002246	3777	Hs.24040	NM_002246	ENSG00000171303	KCNK3	K2p3.1|OAT1|PPH4|TASK|TASK-1|TBAK1	potassium two pore domain channel subfamily K member 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr2-2205	chr2	27308132	27309132	+	16.6	1000	promoter-TSS (NM_006488)	promoter-TSS (NM_006488)	-979	NM_006488	3795	Hs.567297	NM_000221	ENSG00000138030	KHK	-	ketohexokinase	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr2-2207	chr2	27405490	27406490	+	16.6	1000	Intergenic	L1MB7|LINE|L1	-28909	NM_080592	51374	Hs.9527	NM_016085	ENSG00000138085	ATRAID	APR--3|APR-3|APR3|C2orf28|HSPC013|PRO240|p18	all-trans retinoic acid induced differentiation factor	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-2212	chr2	28890742	28891742	+	16.6	1000	Intergenic	Intergenic	-83372	NM_206876	5500	Hs.702907	NM_002709	ENSG00000213639	PPP1CB	HEL-S-80p|PP-1B|PP1B|PP1beta|PPP1CD	protein phosphatase 1 catalytic subunit beta	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr2-2213	chr2	29220702	29221702	+	16.6	1000	"intron (NM_001321538, intron 3 of 18)"	"intron (NM_001321538, intron 3 of 18)"	17038	NM_199280	165186	Hs.525977	NM_199280	ENSG00000189350	FAM179A	-	family with sequence similarity 179 member A	protein-coding	16.64	0.49	33.95918367	3.68E-16
chr2-2216	chr2	29540565	29541565	+	15.4	1000	"intron (NM_004304, intron 8 of 28)"	"intron (NM_004304, intron 8 of 28)"	157178	NR_136317	105374389	Hs.196534	NR_136317		LOC105374389	-	uncharacterized LOC105374389	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr2-2218	chr2	29884736	29885736	+	14.7	1000	"intron (NM_004304, intron 3 of 28)"	LTR85a|LTR|Gypsy?	-186993	NR_136317	105374389	Hs.196534	NR_136317		LOC105374389	-	uncharacterized LOC105374389	ncRNA	14.72	0	15.16333034	3.99E-13
chr2-2219	chr2	30038779	30039779	+	16.6	1000	"intron (NM_004304, intron 1 of 28)"	MIRc|SINE|MIR	105198	NM_004304	238	Hs.654469	NM_004304	ENSG00000171094	ALK	CD246|NBLST3	anaplastic lymphoma receptor tyrosine kinase	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr2-222	chr2	38659278	38660837	+	32	1559	Intergenic	Intergenic	-54331	NM_001330462	64225	Hs.594950	NM_022374	ENSG00000119787	ATL2	ARL3IP2|ARL6IP2|aip-2|atlastin2	atlastin GTPase 2	protein-coding	32	6.31	5.071315372	1.20E-10
chr2-2221	chr2	30246720	30247720	+	16	1000	Intergenic	Intergenic	-102743	NM_004304	238	Hs.654469	NM_004304	ENSG00000171094	ALK	CD246|NBLST3	anaplastic lymphoma receptor tyrosine kinase	protein-coding	16	2.91	5.498281787	4.98E-06
chr2-2224	chr2	30320128	30321128	+	15.4	1000	Intergenic	MLT1I|LTR|ERVL-MaLR	-49122	NM_001127400	51646	Hs.515890	NM_016061	ENSG00000119801	YPEL5	CGI-127	yippee like 5	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-2225	chr2	30982624	30983882	+	19.2	1258	"intron (NM_144575, intron 7 of 22)"	"intron (NM_144575, intron 7 of 22)"	47058	NM_144575	92291	Hs.660911	NM_144575	ENSG00000162949	CAPN13	-	calpain 13	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr2-2226	chr2	31188629	31189629	+	16	1000	"exon (NM_001329096, exon 5 of 17)"	"exon (NM_001329096, exon 5 of 17)"	-158818	NM_144575	92291	Hs.660911	NM_144575	ENSG00000162949	CAPN13	-	calpain 13	protein-coding	16	2.91	5.498281787	4.98E-06
chr2-2231	chr2	37781338	37782338	+	16	1000	Intergenic	L2|LINE|L2	117504	NM_006449	10602	Hs.369574	NM_006449	ENSG00000163171	CDC42EP3	BORG2|CEP3|UB1	CDC42 effector protein 3	protein-coding	16	3.4	4.705882353	2.25E-05
chr2-2232	chr2	37895921	37900640	+	71	4719	"intron (NM_001270436, intron 1 of 1)"	CpG	1062	NM_006449	10602	Hs.369574	NM_006449	ENSG00000163171	CDC42EP3	BORG2|CEP3|UB1	CDC42 effector protein 3	protein-coding	71.05	6.8	10.44852941	3.21E-36
chr2-2234	chr2	37985123	37986123	+	16.6	1000	Intergenic	Intergenic	71231	NR_110011	101929559	Hs.468200	NR_110011	ENSG00000237803	LINC00211	NCRNA00211	long intergenic non-protein coding RNA 211	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr2-2238	chr2	38391687	38392687	+	15.4	1000	"intron (NR_027252, intron 2 of 2)"	L2c|LINE|L2	33940	NR_027252	285154	Hs.353894	NM_173652	ENSG00000232973	CYP1B1-AS1	C2orf58	CYP1B1 antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr2-2239	chr2	38490997	38491997	+	16	1000	Intergenic	Intergenic	112175	NM_001330460	64225	Hs.594950	NM_022374	ENSG00000119787	ATL2	ARL3IP2|ARL6IP2|aip-2|atlastin2	atlastin GTPase 2	protein-coding	16	0.97	16.49484536	3.54E-11
chr2-2243	chr2	38762239	38763239	+	16.6	1000	Intergenic	Intergenic	-19857	NR_110259	101929596	Hs.537341	NR_110259		LOC101929596	-	uncharacterized LOC101929596	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr2-2244	chr2	40677414	40681590	+	58.9	4176	"intron (NM_001112802, intron 1 of 7)"	"intron (NM_001112802, intron 1 of 7)"	-22058	NM_001252624	6546	Hs.31961	NM_021097	ENSG00000183023	SLC8A1	NCX1	solute carrier family 8 member A1	protein-coding	58.89	6.8	8.660294118	2.26E-27
chr2-2246	chr2	42071413	42072413	+	16.6	1000	Intergenic	Intergenic	-32782	NR_033996	388942	Hs.631883	NR_033996	ENSG00000214691	LINC01913	-	long intergenic non-protein coding RNA 1913	ncRNA	16.64	0	17.14115603	3.68E-16
chr2-2248	chr2	42154606	42155606	+	16.6	1000	Intergenic	Intergenic	5757	NR_110263	101929723	Hs.369330	NR_110262	ENSG00000234362	LINC01914	-	long intergenic non-protein coding RNA 1914	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr2-2249	chr2	42187655	42188655	+	16	1000	Intergenic	Intergenic	-7212	NM_001242815	400950	Hs.738713	NM_001242815	ENSG00000205086	C2orf91	-	chromosome 2 open reading frame 91	protein-coding	16	3.4	4.705882353	2.25E-05
chr2-2253	chr2	45227890	45229331	+	23.7	1441	Intergenic	CpG	7932	NM_016932	10736	Hs.101937	NM_016932	ENSG00000170577	SIX2	-	SIX homeobox 2	protein-coding	23.68	0.97	24.41237113	5.03E-19
chr2-2255	chr2	45483938	45485445	+	24.3	1507	Intergenic	Intergenic	-2611	NR_033831	400952	Hs.468368	NR_033831	ENSG00000205054	LINC01121	UNQ6975	long intergenic non-protein coding RNA 1121	ncRNA	24.32	4.85	5.01443299	2.27E-08
chr2-2259	chr2	45875898	45879662	+	55.7	3764	Intergenic	CpG	-1263	NM_005400	5581	Hs.580351	NM_005400	ENSG00000171132	PRKCE	PKCE|nPKC-epsilon	protein kinase C epsilon	protein-coding	55.69	5.34	10.42883895	1.32E-28
chr2-2260	chr2	45905991	45906991	+	16	1000	"intron (NM_005400, intron 1 of 14)"	"intron (NM_005400, intron 1 of 14)"	27448	NM_005400	5581	Hs.580351	NM_005400	ENSG00000171132	PRKCE	PKCE|nPKC-epsilon	protein kinase C epsilon	protein-coding	16	1.94	8.24742268	7.67E-08
chr2-2265	chr2	46724518	46728220	+	69.1	3702	Intergenic	Charlie2b|DNA|hAT-Charlie	19665	NM_001145051	388946	Hs.733348	NM_001145051	ENSG00000187600	TMEM247	-	transmembrane protein 247	protein-coding	69.13	8.25	8.379393939	3.91E-31
chr2-2266	chr2	46893249	46894249	+	14.7	1000	Intergenic	Intergenic	-32350	NM_014011	9655	Hs.468426	NM_014011	ENSG00000171150	SOCS5	CIS6|CISH6|Cish5|SOCS-5	suppressor of cytokine signaling 5	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-2268	chr2	47081204	47082204	+	16.6	1000	"intron (NR_024452, intron 1 of 2)"	MamRep605|Unknown|Unknown	26701	NR_024452	100134259	Hs.114449	NR_024452	ENSG00000239332	LINC01119	-	long intergenic non-protein coding RNA 1119	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr2-2269	chr2	47088229	47089860	+	26.2	1631	Intergenic	Intergenic	34041	NR_024452	100134259	Hs.114449	NR_024452	ENSG00000239332	LINC01119	-	long intergenic non-protein coding RNA 1119	ncRNA	26.24	4.37	6.004576659	7.40E-10
chr2-2270	chr2	47113525	47115076	+	26.2	1551	Intergenic	Intergenic	28707	NM_139279	90411	Hs.662152	NM_139279	ENSG00000180398	MCFD2	F5F8D|F5F8D2|LMAN1IP|SDNSF	multiple coagulation factor deficiency 2	protein-coding	26.24	5.34	4.913857678	2.00E-08
chr2-2272	chr2	47932818	47933818	+	16.6	1000	Intergenic	MER33|DNA|hAT-Charlie	-76903	NM_001281492	2956	Hs.445052	NM_000179	ENSG00000116062	MSH6	GTBP|GTMBP|HNPCC5|HSAP|p160	mutS homolog 6	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-2280	chr2	60961944	60962944	+	16	1000	Intergenic	Intergenic	-20921	NM_022894	64895	Hs.387471	NM_022894	ENSG00000115421	PAPOLG	-	poly(A) polymerase gamma	protein-coding	16	2.91	5.498281787	4.98E-06
chr2-2281	chr2	64473462	64474462	+	13.4	1000	"intron (NR_120420, intron 2 of 4)"	"intron (NR_120420, intron 2 of 4)"	18427	NR_120420	100507006	Hs.442789	NR_120420		LOC100507006	-	uncharacterized LOC100507006	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr2-2286	chr2	64694462	64695462	+	16	1000	Intergenic	Intergenic	13635	NM_014181	29094	Hs.372208	NM_014181	ENSG00000119862	LGALSL	GRP|HSPC159	galectin like	protein-coding	16	1.94	8.24742268	7.67E-08
chr2-2287	chr2	64990743	64991743	+	16.6	1000	Intergenic	Intergenic	99522	NR_110224	101927438	Hs.580313	NR_110224	ENSG00000234572	LINC01800	-	long intergenic non-protein coding RNA 1800	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr2-2288	chr2	65007542	65008542	+	16	1000	Intergenic	Intergenic	82723	NR_110224	101927438	Hs.580313	NR_110224	ENSG00000234572	LINC01800	-	long intergenic non-protein coding RNA 1800	ncRNA	16	2.43	6.58436214	7.90E-07
chr2-2290	chr2	65777017	65778017	+	16	1000	Intergenic	Intergenic	-117861	NM_181784	200734	Hs.59332	NM_181784	ENSG00000198369	SPRED2	Spred-2	sprouty related EVH1 domain containing 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-2298	chr2	70536862	70538436	+	26.2	1574	Intergenic	AluSc|SINE|Alu	-8429	NM_032822	84908	Hs.516077	NM_032822	ENSG00000035141	FAM136A	-	family with sequence similarity 136 member A	protein-coding	26.24	3.4	7.717647059	9.95E-12
chr2-2302	chr2	70677229	70678229	+	16.6	1000	"3' UTR (NM_001308158, exon 6 of 6)"	"3' UTR (NM_001308158, exon 6 of 6)"	31043	NR_046798	100874273	Hs.682157	NR_046798	ENSG00000224606	TGFA-IT1	-	TGFA intronic transcript 1	ncRNA	16.64	1.46	11.39726027	2.99E-10
chr2-2303	chr2	70771938	70772938	+	16	1000	"intron (NM_003236, intron 1 of 5)"	"intron (NM_003236, intron 1 of 5)"	8332	NM_001308158	7039	Hs.170009	NM_003236	ENSG00000163235	TGFA	TFGA	transforming growth factor alpha	protein-coding	16	3.4	4.705882353	2.25E-05
chr2-2308	chr2	71512415	71513828	+	18.6	1413	Intergenic	Intergenic	-45764	NM_014497	27332	Hs.434401	NM_014497	ENSG00000075292	ZNF638	NP220|ZFML|Zfp638	zinc finger protein 638	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr2-2310	chr2	71691415	71696846	+	76.8	5431	"intron (NM_001130455, intron 1 of 54)"	"intron (NM_001130455, intron 1 of 54)"	298	NM_001130987	8291	Hs.252180	NM_003494	ENSG00000135636	DYSF	FER1L1|LGMD2B|MMD1	dysferlin	protein-coding	76.81	12.62	6.08637084	3.18E-27
chr2-2313	chr2	71706101	71707101	+	16.6	1000	"intron (NM_001130455, intron 1 of 54)"	"intron (NM_001130455, intron 1 of 54)"	12769	NM_001130987	8291	Hs.252180	NM_003494	ENSG00000135636	DYSF	FER1L1|LGMD2B|MMD1	dysferlin	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr2-2314	chr2	72005652	72006652	+	16.6	1000	Intergenic	Intergenic	312320	NM_001130987	8291	Hs.252180	NM_003494	ENSG00000135636	DYSF	FER1L1|LGMD2B|MMD1	dysferlin	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr2-2315	chr2	72113164	72114164	+	15.4	1000	Intergenic	Intergenic	261327	NM_001277742	56603	Hs.91546	NM_019885	ENSG00000003137	CYP26B1	CYP26A2|P450RAI-2|P450RAI2|RHFCA	cytochrome P450 family 26 subfamily B member 1	protein-coding	15.36	0	15.82260557	1.26E-14
chr2-2321	chr2	73418300	73419300	+	16	1000	Intergenic	L2c|LINE|L2	-10586	NM_001134462	344022	Hs.694384	NM_001134462	ENSG00000214513	NOTO	-	notochord homeobox	protein-coding	16	1.94	8.24742268	7.67E-08
chr2-2328	chr2	74974179	74975179	+	16	1000	Intergenic	Intergenic	-85103	NM_000189	3099	Hs.406266	NM_000189	ENSG00000159399	HK2	HKII|HXK2	hexokinase 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr2-2329	chr2	75037374	75038374	+	15.4	1000	Intergenic	Intergenic	-21908	NM_000189	3099	Hs.406266	NM_000189	ENSG00000159399	HK2	HKII|HXK2	hexokinase 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-2332	chr2	85359250	85360605	+	21.8	1355	promoter-TSS (NM_031283)	promoter-TSS (NM_031283)	-656	NM_031283	83439	Hs.516297	NM_031283	ENSG00000152284	TCF7L1	TCF-3|TCF3	transcription factor 7 like 1	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr2-2334	chr2	85390864	85391864	+	16	1000	"intron (NM_031283, intron 3 of 11)"	"intron (NM_031283, intron 3 of 11)"	30781	NM_031283	83439	Hs.516297	NM_031283	ENSG00000152284	TCF7L1	TCF-3|TCF3	transcription factor 7 like 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr2-2335	chr2	85403808	85404808	+	15.4	1000	"intron (NM_031283, intron 3 of 11)"	MLT1A0|LTR|ERVL-MaLR	-36467	NR_136323	102724579	Hs.669216	NR_136323		LOC102724579	-	uncharacterized LOC102724579	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr2-2336	chr2	85416572	85417572	+	14.1	1000	"intron (NM_031283, intron 3 of 11)"	"intron (NM_031283, intron 3 of 11)"	-23703	NR_136323	102724579	Hs.669216	NR_136323		LOC102724579	-	uncharacterized LOC102724579	ncRNA	14.08	0	14.5040551	3.99E-13
chr2-2337	chr2	85430170	85431170	+	16.6	1000	"intron (NM_031283, intron 3 of 11)"	AluJr|SINE|Alu	-10105	NR_136323	102724579	Hs.669216	NR_136323		LOC102724579	-	uncharacterized LOC102724579	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr2-2339	chr2	85507595	85508595	+	15.4	1000	"intron (NM_031283, intron 3 of 11)"	MIRc|SINE|MIR	47324	NM_001206840	10618	Hs.593382	NM_006464	ENSG00000152291	TGOLN2	TGN38|TGN46|TGN48|TGN51|TTGN2	trans-golgi network protein 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-2342	chr2	85900800	85901800	+	16.6	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	-5436	NM_198843	6439	Hs.512690	NM_000542	ENSG00000168878	SFTPB	PSP-B|SFTB3|SFTP3|SMDP1|SP-B	surfactant protein B	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-2343	chr2	85915837	85916837	+	15.4	1000	Intergenic	AluSp|SINE|Alu	-5077	NM_012483	10578	Hs.105806	NM_006433	ENSG00000115523	GNLY	D2S69E|LAG-2|LAG2|NKG5|TLA519	granulysin	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-2347	chr2	85960272	85961272	+	16	1000	Intergenic	Intergenic	-20137	NM_032827	84913	Hs.135569	NM_032827	ENSG00000168874	ATOH8	HATH6|bHLHa21	atonal bHLH transcription factor 8	protein-coding	16	3.4	4.705882353	2.25E-05
chr2-2351	chr2	86147555	86148555	+	16	1000	Intergenic	MLT1J|LTR|ERVL-MaLR	31652	NR_110569	101928113	Hs.625888	NR_110569		ST3GAL5-AS1	-	ST3GAL5 antisense RNA 1 (head to head)	ncRNA	16	1.94	8.24742268	7.67E-08
chr2-2373	chr2	95604954	95605954	+	16.6	1000	"intron (NR_037597, intron 1 of 9)"	"intron (NR_037597, intron 1 of 9)"	7633	NR_037597	442028	Hs.611545	NR_037597	ENSG00000259848	LOC442028	-	uncharacterized LOC442028	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr2-2375	chr2	97548782	97550071	+	20.5	1289	"intron (NM_016490, intron 2 of 4)"	"intron (NM_016490, intron 2 of 4)"	11473	NM_001172667	51252	Hs.107922	NM_016490	ENSG00000168754	FAM178B	-	family with sequence similarity 178 member B	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr2-2376	chr2	97597262	97598262	+	16	1000	"intron (NM_001122646, intron 8 of 16)"	"intron (NM_001122646, intron 8 of 16)"	12919	NR_110209	101927053	Hs.677537	NR_110209		LOC101927053	-	uncharacterized LOC101927053	ncRNA	16	0.97	16.49484536	3.54E-11
chr2-2380	chr2	98779220	98780483	+	21.1	1263	"intron (NM_001345864, intron 2 of 21)"	AluSc5|SINE|Alu	13893	NM_001345864	200403	Hs.269977	NM_144992	ENSG00000168658	VWA3B	SCAR22	von Willebrand factor A domain containing 3B	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr2-2382	chr2	98867711	98868711	+	19.2	1000	"intron (NM_001345864, intron 14 of 21)"	"intron (NM_001345864, intron 14 of 21)"	-94407	NM_001079878	1261	Hs.234785	NM_001298	ENSG00000144191	CNGA3	ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3	cyclic nucleotide gated channel alpha 3	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr2-2383	chr2	98926275	98927275	+	16	1000	"intron (NM_001345864, intron 20 of 21)"	"intron (NM_001345864, intron 20 of 21)"	-35843	NM_001079878	1261	Hs.234785	NM_001298	ENSG00000144191	CNGA3	ACHM2|CCNC1|CCNCa|CCNCalpha|CNCG3|CNG3	cyclic nucleotide gated channel alpha 3	protein-coding	16	1.94	8.24742268	7.67E-08
chr2-2385	chr2	99497373	99498760	+	19.2	1387	"intron (NM_207362, intron 1 of 9)"	"intron (NM_207362, intron 1 of 9)"	54618	NM_207362	343990	Hs.469398	NM_207362	ENSG00000196872	KIAA1211L	C2orf55	KIAA1211 like	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr2-2394	chr2	101598180	101599962	+	28.2	1782	"intron (NM_002518, intron 16 of 20)"	"intron (NM_002518, intron 16 of 20)"	-5448	NR_110213	101927142	Hs.656556	NR_110213		LOC101927142	-	uncharacterized LOC101927142	ncRNA	28.16	4.37	6.443935927	1.84E-11
chr2-2395	chr2	101615863	101616863	+	16	1000	Intergenic	Intergenic	-2328	NM_000993	6160	Hs.469473	NM_000993	ENSG00000071082	RPL31	L31	ribosomal protein L31	protein-coding	16	0.97	16.49484536	3.54E-11
chr2-2396	chr2	101765539	101767399	+	28.8	1860	"intron (NR_138475, intron 1 of 18)"	"intron (NR_138475, intron 1 of 18)"	1440	NM_001102426	11138	Hs.442657	NM_007063	ENSG00000204634	TBC1D8	AD3|GRAMD8|HBLP1|TBC1D8A|VRP	TBC1 domain family member 8	protein-coding	28.8	3.88	7.422680412	1.97E-12
chr2-2406	chr2	105451144	105452611	+	17.9	1467	"intron (NR_037883, intron 1 of 3)"	MIRb|SINE|MIR	16057	NR_037883	100506421	Hs.437281	NR_037883	ENSG00000233639	LINC01158	PANTR1|linc-Brn1a|linc-POU3F3	long intergenic non-protein coding RNA 1158	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr2-2410	chr2	108956919	108958492	+	21.8	1573	"intron (NR_037191, intron 3 of 3)"	L1PA10|LINE|L1	19011	NR_037191	151234	Hs.447681	NR_037191	ENSG00000237223	SULT1C2P1	SULT1C1P	sulfotransferase family 1C member 2 pseudogene 1	pseudo	21.76	2.43	8.95473251	2.49E-11
chr2-2411	chr2	109832052	109833052	+	16	1000	"intron (NM_001099289, intron 1 of 9)"	"intron (NM_001099289, intron 1 of 9)"	-74508	NR_036223	100422863		NR_036223	ENSG00000264934	MIR4265	-	microRNA 4265	ncRNA	16	1.94	8.24742268	7.67E-08
chr2-2412	chr2	109856086	109857086	+	16.6	1000	"intron (NM_001099289, intron 1 of 9)"	MIR3|SINE|MIR	73495	NR_036224	100423027		NR_036224	ENSG00000265965	MIR4266	-	microRNA 4266	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr2-2414	chr2	110313189	110314189	+	16	1000	"intron (NM_144710, intron 8 of 10)"	"intron (NM_144710, intron 8 of 10)"	57545	NM_001321515	151011	Hs.469615	NM_144710	ENSG00000186522	10-Sep	-	septin 10	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-2423	chr2	111817178	111818471	+	19.8	1293	"intron (NM_001142807, intron 16 of 17)"	L1MD1|LINE|L1	55341	NR_122074	400997	Hs.652337	NR_122074	ENSG00000204581	ACOXL-AS1	-	ACOXL antisense RNA 1	ncRNA	19.84	3.4	5.835294118	1.47E-07
chr2-2427	chr2	113605723	113606723	+	16.6	1000	Intergenic	Intergenic	-11867	NM_000576	3553	Hs.126256	NM_000576	ENSG00000125538	IL1B	IL-1|IL1-BETA|IL1F2	interleukin 1 beta	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr2-2431	chr2	114074272	114075272	+	15.4	1000	Intergenic	Intergenic	-38274	NM_003466	7849	Hs.469728	NM_003466	ENSG00000125618	PAX8	-	paired box 8	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-2433	chr2	119896181	119897181	+	14.7	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	19790	NM_182528	165257	Hs.433493	NM_182528	ENSG00000144119	C1QL2	C1QTNF10|CTRP10	complement C1q like 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-2435	chr2	120175419	120176419	+	16	1000	Intergenic	Intergenic	-13527	NM_183240	140738	Hs.26216	NM_183240	ENSG00000171227	TMEM37	PR|PR1	transmembrane protein 37	protein-coding	16	0	16.4818808	1.26E-14
chr2-2436	chr2	120189478	120191231	+	25	1753	"intron (NM_183240, intron 1 of 1)"	MIRb|SINE|MIR	908	NM_183240	140738	Hs.26216	NM_183240	ENSG00000171227	TMEM37	PR|PR1	transmembrane protein 37	protein-coding	24.96	0.97	25.73195876	2.01E-20
chr2-2437	chr2	120199940	120201210	+	19.2	1270	"intron (NM_002980, intron 11 of 12)"	MIRb|SINE|MIR	11129	NM_183240	140738	Hs.26216	NM_183240	ENSG00000171227	TMEM37	PR|PR1	transmembrane protein 37	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr2-2440	chr2	121175720	121176720	+	16.6	1000	Intergenic	Intergenic	47705	NR_027181	84931	Hs.334519	NM_032845	ENSG00000280409	LINC01101	-	long intergenic non-protein coding RNA 1101	ncRNA	16.64	1.46	11.39726027	2.99E-10
chr2-2441	chr2	121181382	121182382	+	14.7	1000	Intergenic	MLT1H1|LTR|ERVL-MaLR	42043	NR_027181	84931	Hs.334519	NM_032845	ENSG00000280409	LINC01101	-	long intergenic non-protein coding RNA 1101	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr2-2442	chr2	121300852	121301852	+	16.6	1000	Intergenic	MER45B|DNA|hAT-Tip100	-77427	NR_027181	84931	Hs.334519	NM_032845	ENSG00000280409	LINC01101	-	long intergenic non-protein coding RNA 1101	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr2-2444	chr2	121353795	121355058	+	18.6	1263	Intergenic	Intergenic	-130501	NR_027181	84931	Hs.334519	NM_032845	ENSG00000280409	LINC01101	-	long intergenic non-protein coding RNA 1101	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr2-2446	chr2	121402281	121403281	+	16.6	1000	Intergenic	AluJr|SINE|Alu	-152086	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr2-2450	chr2	121988137	121989137	+	16.6	1000	"intron (NM_014553, intron 13 of 14)"	MIR|SINE|MIR	54141	NM_014553	29842	Hs.156471	NM_014553	ENSG00000115112	TFCP2L1	CRTR1|LBP-9|LBP9	transcription factor CP2 like 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr2-2452	chr2	122027749	122028749	+	15.4	1000	"intron (NM_014553, intron 2 of 14)"	L1MC4a|LINE|L1	14529	NM_014553	29842	Hs.156471	NM_014553	ENSG00000115112	TFCP2L1	CRTR1|LBP-9|LBP9	transcription factor CP2 like 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr2-2456	chr2	127669293	127670293	+	15.4	1000	Intergenic	Intergenic	13331	NR_136239	101929926	Hs.98984	NM_001322244	ENSG00000237524	LOC101929926	-	uncharacterized LOC101929926	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-2457	chr2	127690649	127691910	+	19.2	1261	Intergenic	Intergenic	34817	NR_136239	101929926	Hs.98984	NM_001322244	ENSG00000237524	LOC101929926	-	uncharacterized LOC101929926	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr2-2458	chr2	127721999	127722999	+	16.6	1000	Intergenic	AluSz|SINE|Alu	66037	NR_136239	101929926	Hs.98984	NM_001322244	ENSG00000237524	LOC101929926	-	uncharacterized LOC101929926	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr2-2459	chr2	127731685	127732685	+	16.6	1000	Intergenic	Intergenic	75723	NR_136239	101929926	Hs.98984	NM_001322244	ENSG00000237524	LOC101929926	-	uncharacterized LOC101929926	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr2-2460	chr2	127744747	127745747	+	16	1000	Intergenic	AluJr4|SINE|Alu	88785	NR_136239	101929926	Hs.98984	NM_001322244	ENSG00000237524	LOC101929926	-	uncharacterized LOC101929926	protein-coding	16	2.91	5.498281787	4.98E-06
chr2-2465	chr2	129083203	129084203	+	16	1000	Intergenic	Intergenic	-7532	NM_004807	9394	Hs.512841	NM_004807	ENSG00000136720	HS6ST1	HH15|HS6ST	heparan sulfate 6-O-sulfotransferase 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr2-247	chr2	128437035	128438383	+	23	1348	"intron (NM_001161404, intron 1 of 9)"	"intron (NM_001161404, intron 1 of 9)"	1651	NM_001161404	55679	Hs.469881	NM_017980	ENSG00000072163	LIMS2	LGMD2W|PINCH-2|PINCH2	LIM zinc finger domain containing 2	protein-coding	23.04	3.4	6.776470588	5.45E-10
chr2-2470	chr2	130537971	130538971	+	16.6	1000	Intergenic	Intergenic	-142279	NR_110285	101927924	Hs.570248	NR_110285	ENSG00000237574	LINC01856	-	long intergenic non-protein coding RNA 1856	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr2-2472	chr2	131558461	131559461	+	16.6	1000	Intergenic	ERVL-B4-int|LTR|ERVL	45097	NM_001105195	205147	Hs.369289	NM_152698	ENSG00000178171	AMER3	FAM123C	APC membrane recruitment protein 3	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-2473	chr2	131601039	131602039	+	16.6	1000	Intergenic	Intergenic	-72685	NM_015320	50649	Hs.469935	NM_015320	ENSG00000136002	ARHGEF4	ASEF|ASEF1|GEF4|STM6	Rho guanine nucleotide exchange factor 4	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr2-2474	chr2	131773789	131775072	+	20.5	1283	"intron (NM_015320, intron 4 of 13)"	"intron (NM_015320, intron 4 of 13)"	76101	NM_001321748	130074	Hs.534679	NM_001009993	ENSG00000152102	FAM168B	MANI	family with sequence similarity 168 member B	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr2-2476	chr2	132794544	132796340	+	35.8	1796	Intergenic	CpG	124083	NR_027019	554226	Hs.380689	NR_027019	ENSG00000163046	ANKRD30BL	ANKRD30BP3|NCRNA00164	ankyrin repeat domain 30B like	pseudo	35.84	1.94	18.4742268	8.81E-26
chr2-2477	chr2	134765831	134768259	+	32.6	2428	Intergenic	L1ME4a|LINE|L1	-117651	NR_037450	100500878		NR_037450	ENSG00000263813	MIR3679	mir-3679	microRNA 3679	ncRNA	32.64	7.77	4.200772201	7.28E-09
chr2-2481	chr2	136810630	136811630	+	16.6	1000	Intergenic	AluSx|SINE|Alu	62683	NM_001008540	7852	Hs.593413	NM_003467	ENSG00000121966	CXCR4	CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS	C-X-C motif chemokine receptor 4	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-2484	chr2	143662211	143663211	+	16	1000	"intron (NM_001199241, intron 3 of 14)"	HERV17-int|LTR|ERV1	27516	NM_001199241	8942	Hs.470126	NM_003937	ENSG00000115919	KYNU	KYNUU	kynureninase	protein-coding	16	2.43	6.58436214	7.90E-07
chr2-2486	chr2	145731759	145732759	+	15.4	1000	"intron (NR_033870, intron 3 of 4)"	"intron (NR_033870, intron 3 of 4)"	306725	NR_033870	401014	Hs.742290	NR_033870	ENSG00000226674	TEX41	DKFZp686O1327|LINC00953	testis expressed 41 (non-protein coding)	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr2-2487	chr2	146008053	146009463	+	21.8	1410	Intergenic	Intergenic	583224	NR_033870	401014	Hs.742290	NR_033870	ENSG00000226674	TEX41	DKFZp686O1327|LINC00953	testis expressed 41 (non-protein coding)	ncRNA	21.76	2.91	7.47766323	3.87E-10
chr2-2489	chr2	149801210	149802210	+	16	1000	"intron (NM_004522, intron 7 of 25)"	L1MB3|LINE|L1	-2634	NR_111932	3800	Hs.435557	NM_004522	ENSG00000168280	KIF5C	CDCBM2|KINN|NKHC|NKHC-2|NKHC2	kinesin family member 5C	protein-coding	16	1.94	8.24742268	7.67E-08
chr2-2492	chr2	150020703	150021971	+	19.2	1268	"intron (NM_001317002, intron 4 of 7)"	"intron (NM_001317002, intron 4 of 7)"	46649	NM_001317002	130576	Hs.357567	NM_177964	ENSG00000150556	LYPD6B	CT116|LYPD7	LY6/PLAUR domain containing 6B	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr2-2493	chr2	152955232	152956232	+	14.7	1000	promoter-TSS (NM_001005746)	promoter-TSS (NM_001005746)	-51	NM_000726	785	Hs.120725	NM_000726	ENSG00000182389	CACNB4	CAB4|CACNLB4|EA5|EIG9|EJM|EJM4|EJM6	calcium voltage-gated channel auxiliary subunit beta 4	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr2-2498	chr2	169217862	169218862	+	17.3	1000	Intergenic	L3|LINE|CR1	-94397	NM_203463	253782	Hs.506829	NM_203463	ENSG00000172292	CERS6	CERS5|LASS6	ceramide synthase 6	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr2-2499	chr2	170284784	170285784	+	15.4	1000	Intergenic	L1MB7|LINE|L1	-50722	NM_152384	129880	Hs.233398	NM_152384	ENSG00000163093	BBS5	-	Bardet-Biedl syndrome 5	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-2505	chr2	171378026	171379026	+	16.6	1000	"intron (NM_001083615, intron 29 of 33)"	"intron (NM_001083615, intron 29 of 33)"	-171073	NR_110576	101929753	Hs.534101	NR_110576		LOC101929753	-	uncharacterized LOC101929753	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr2-2509	chr2	172948118	172949528	+	22.4	1410	Intergenic	Intergenic	-1385	NM_178120	1745	Hs.407015	NM_178120	ENSG00000144355	DLX1	-	distal-less homeobox 1	protein-coding	22.4	1.46	15.34246575	8.59E-15
chr2-2519	chr2	176937074	176938726	+	28.2	1652	Intergenic	Intergenic	10790	NM_001080458	344191	Hs.452341	NM_001080458	ENSG00000174279	EVX2	EVX-2	even-skipped homeobox 2	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr2-2521	chr2	176957339	176960503	+	53.8	3164	"intron (NM_000523, intron 1 of 1)"	"intron (NM_000523, intron 1 of 1)"	1389	NM_000523	3239	Hs.152414	NM_000523	ENSG00000128714	HOXD13	BDE|BDSD|HOX4I|SPD|SPD1	homeobox D13	protein-coding	53.77	0.97	55.43298969	3.00E-57
chr2-2523	chr2	176963075	176967692	+	60.2	4617	"exon (NM_021193, exon 2 of 2)"	"exon (NM_021193, exon 2 of 2)"	853	NM_021193	3238	Hs.450028	NM_021193	ENSG00000170178	HOXD12	HOX4H	homeobox D12	protein-coding	60.17	14.56	4.132554945	2.47E-15
chr2-2525	chr2	176981385	176990391	+	129.9	9006	Intergenic	Intergenic	-1525	NM_014213	3235	Hs.236646	NM_014213	ENSG00000128709	HOXD9	HOX4|HOX4C|Hox-4.3|Hox-5.2	homeobox D9	protein-coding	129.94	24.27	5.353934899	8.67E-40
chr2-2529	chr2	177029682	177031792	+	35.2	2110	"intron (NM_006898, intron 1 of 2)"	"intron (NM_006898, intron 1 of 2)"	1932	NM_006898	3232	Hs.93574	NM_006898	ENSG00000128652	HOXD3	HOX1D|HOX4|HOX4A|Hox-4.1	homeobox D3	protein-coding	35.2	4.85	7.257731959	1.02E-14
chr2-2530	chr2	177456075	177457075	+	14.7	1000	Intergenic	Intergenic	9205	NR_031648	100302142		NR_031648	ENSG00000283203	MIR1246	MIRN1246|hsa-mir-1246	microRNA 1246	ncRNA	14.72	0	15.16333034	3.99E-13
chr2-2532	chr2	177507956	177508956	+	16	1000	"intron (NR_110599, intron 2 of 3)"	"intron (NR_110599, intron 2 of 3)"	5974	NR_110599	102724224	Hs.663125	NR_110599	ENSG00000224577	LINC01117	-	long intergenic non-protein coding RNA 1117	ncRNA	16	2.91	5.498281787	4.98E-06
chr2-2534	chr2	177590374	177591374	+	16	1000	Intergenic	Intergenic	88392	NR_110599	102724224	Hs.663125	NR_110599	ENSG00000224577	LINC01117	-	long intergenic non-protein coding RNA 1117	ncRNA	16	1.94	8.24742268	7.67E-08
chr2-2535	chr2	177625693	177628383	+	35.8	2690	Intergenic	L1MC|LINE|L1	124556	NR_110599	102724224	Hs.663125	NR_110599	ENSG00000224577	LINC01117	-	long intergenic non-protein coding RNA 1117	ncRNA	35.84	5.82	6.158075601	1.09E-13
chr2-2539	chr2	177971594	177972594	+	16	1000	Intergenic	MSTD|LTR|ERVL-MaLR	-105328	NM_001330247	220988	Hs.516539	NM_194247	ENSG00000170144	HNRNPA3	2610510D13Rik|D10S102|FBRNP|HNRPA3	heterogeneous nuclear ribonucleoprotein A3	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-2547	chr2	201568582	201569582	+	16.6	1000	"intron (NR_135011, intron 2 of 31)"	"intron (NR_135011, intron 2 of 31)"	8636	NR_135012	107161151	Hs.148269	NR_135011		AOX3P-AOX2P	AOX3/AOX3L1	AOX3P-AOX2P readthrough	pseudo	16.64	3.4	4.894117647	4.51E-06
chr2-2548	chr2	201585307	201586307	+	15.4	1000	"intron (NR_037886, intron 1 of 2)"	L1PA14|LINE|L1	14093	NR_037886	100507140	Hs.382116	NR_037886	ENSG00000237166	LINC01792	-	long intergenic non-protein coding RNA 1792	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr2-2549	chr2	201643816	201645278	+	25.6	1462	TTS (NR_110275)	TTS (NR_110275)	-31722	NM_014670	9689	Hs.355983	NM_014670	ENSG00000082153	BZW1	BZAP45|Nbla10236	basic leucine zipper and W2 domains 1	protein-coding	25.6	2.43	10.53497942	2.44E-14
chr2-2551	chr2	206633953	206635341	+	21.1	1388	"intron (NM_201266, intron 15 of 16)"	"intron (NM_201266, intron 15 of 16)"	87423	NM_201264	8828	Hs.471200	NM_003872	ENSG00000118257	NRP2	NP2|NPN2|PRO2714|VEGF165R2	neuropilin 2	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr2-2553	chr2	207386957	207387957	+	16.6	1000	"intron (NM_003812, intron 3 of 25)"	"intron (NM_003812, intron 3 of 25)"	79089	NM_003812	8745	Hs.370287	NM_003812	ENSG00000114948	ADAM23	MDC-3|MDC3	ADAM metallopeptidase domain 23	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr2-2554	chr2	207393135	207394135	+	16.6	1000	"intron (NM_003812, intron 3 of 25)"	MIR|SINE|MIR	85267	NM_003812	8745	Hs.370287	NM_003812	ENSG00000114948	ADAM23	MDC-3|MDC3	ADAM metallopeptidase domain 23	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr2-2556	chr2	216294301	216295301	+	16.6	1000	"intron (NM_054034, intron 5 of 12)"	"intron (NM_054034, intron 5 of 12)"	5990	NM_212478	2335	Hs.203717	NM_002026	ENSG00000115414	FN1	CIG|ED-B|FINC|FN|FNZ|GFND|GFND2|LETS|MSF	fibronectin 1	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr2-2559	chr2	217235098	217237812	+	42.2	2714	"5' UTR (NM_020814, exon 1 of 4)"	"5' UTR (NM_020814, exon 1 of 4)"	295	NM_020814	57574	Hs.170388	NM_020814	ENSG00000144583	4-Mar	MARCH-IV|RNF174	membrane associated ring-CH-type finger 4	protein-coding	42.25	6.31	6.695721078	7.07E-17
chr2-256	chr2	217558675	217560556	+	45.4	1881	"5' UTR (NM_000599, exon 1 of 4)"	"5' UTR (NM_000599, exon 1 of 4)"	657	NM_000599	3488	Hs.607212	NM_000599	ENSG00000115461	IGFBP5	IBP5	insulin like growth factor binding protein 5	protein-coding	45.45	5.34	8.511235955	8.61E-21
chr2-2560	chr2	217616495	217617813	+	18.6	1318	Intergenic	Intergenic	-56882	NM_000599	3488	Hs.607212	NM_000599	ENSG00000115461	IGFBP5	IBP5	insulin like growth factor binding protein 5	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr2-2561	chr2	217640323	217641911	+	25	1588	Intergenic	Intergenic	-80845	NM_000599	3488	Hs.607212	NM_000599	ENSG00000115461	IGFBP5	IBP5	insulin like growth factor binding protein 5	protein-coding	24.96	5.82	4.288659794	3.56E-07
chr2-2563	chr2	217653758	217654758	+	15.4	1000	Intergenic	Intergenic	70524	NM_003284	7141	Hs.3017	NM_003284	ENSG00000118245	TNP1	TP1	transition protein 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-2564	chr2	217679772	217680772	+	16	1000	Intergenic	MER53|DNA|hAT	44510	NM_003284	7141	Hs.3017	NM_003284	ENSG00000118245	TNP1	TP1	transition protein 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr2-2568	chr2	217934813	217935813	+	16	1000	Intergenic	Intergenic	199818	NR_130782	101928327	Hs.350698	NR_130782	ENSG00000223874	LINC01921	-	long intergenic non-protein coding RNA 1921	ncRNA	16	0	16.4818808	1.26E-14
chr2-2569	chr2	218137223	218138223	+	15.4	1000	Intergenic	Intergenic	-9733	NR_133642	105373877		NR_133642		DIRC3-AS1	-	DIRC3 antisense RNA 1	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr2-2570	chr2	218143876	218144876	+	16	1000	Intergenic	MamRep38|DNA|hAT	-3080	NR_133642	105373877		NR_133642		DIRC3-AS1	-	DIRC3 antisense RNA 1	ncRNA	16	1.94	8.24742268	7.67E-08
chr2-2574	chr2	218902684	218903684	+	16	1000	"intron (NR_034176, intron 2 of 13)"	"intron (NR_034176, intron 2 of 13)"	3527	NR_034176	285180	Hs.570069	NM_198483	ENSG00000188282	RUFY4	ZFYVE31	RUN and FYVE domain containing 4	protein-coding	16	3.4	4.705882353	2.25E-05
chr2-2575	chr2	219048005	219049005	+	16	1000	Intergenic	LTR1D|LTR|ERV1	-16789	NM_000634	3577	Hs.194778	NM_000634	ENSG00000163464	CXCR1	C-C|C-C-CKR-1|CD128|CD181|CDw128a|CKR-1|CMKAR1|IL8R1|IL8RA|IL8RBA	C-X-C motif chemokine receptor 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr2-2576	chr2	219669245	219670245	+	16.6	1000	"intron (NM_000784, intron 1 of 8)"	MLT1B|LTR|ERVL-MaLR	-18068	NR_128707	103504730		NR_128707	ENSG00000283639	MIR9500	hsa-mir-9500	microRNA 9500	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr2-2577	chr2	219683366	219684366	+	16	1000	Intergenic	Intergenic	-3947	NR_128707	103504730		NR_128707	ENSG00000283639	MIR9500	hsa-mir-9500	microRNA 9500	ncRNA	16	3.88	4.12371134	7.91E-05
chr2-2578	chr2	219717754	219719601	+	30.7	1847	Intergenic	L2b|LINE|L2	-5869	NM_006522	7475	Hs.29764	NM_006522	ENSG00000115596	WNT6	-	Wnt family member 6	protein-coding	30.72	4.85	6.334020619	3.34E-12
chr2-2579	chr2	219723430	219724430	+	16.6	1000	promoter-TSS (NM_006522)	promoter-TSS (NM_006522)	-616	NM_006522	7475	Hs.29764	NM_006522	ENSG00000115596	WNT6	-	Wnt family member 6	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr2-2583	chr2	219919643	219920643	+	16	1000	"exon (NM_002181, exon 3 of 3)"	"exon (NM_002181, exon 3 of 3)"	3329	NR_036081	100422957		NR_036081	ENSG00000264755	MIR3131	mir-3131	microRNA 3131	ncRNA	16	1.46	10.95890411	3.44E-09
chr2-2586	chr2	220215250	220217214	+	31.4	1964	Intergenic	L2a|LINE|L2	-18333	NM_001007089	389075	Hs.290551	NM_001007089	ENSG00000182698	RESP18	-	regulated endocrine specific protein 18	protein-coding	31.36	4.37	7.176201373	3.82E-13
chr2-2587	chr2	220271792	220273126	+	21.1	1334	Intergenic	MIR3|SINE|MIR	-7715	NM_001319117	23549	Hs.258551	NM_012100	ENSG00000123992	DNPEP	ASPEP|DAP	aspartyl aminopeptidase	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr2-2589	chr2	220299865	220300865	+	15.4	1000	"intron (NM_005876, intron 1 of 40)"	"intron (NM_005876, intron 1 of 40)"	665	NM_005876	10290	Hs.21639	NM_005876	ENSG00000072195	SPEG	APEG-1|APEG1|BPEG|CNM5|SPEGalpha|SPEGbeta	SPEG complex locus	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-2591	chr2	220426906	220427906	+	16	1000	"intron (NM_015311, intron 7 of 20)"	"intron (NM_015311, intron 7 of 20)"	8862	NM_001173408	23363	Hs.526594	NM_015311	ENSG00000124006	OBSL1	-	obscurin like 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr2-2594	chr2	220508215	220509761	+	23.7	1546	Intergenic	Intergenic	16696	NR_048551	6508	Hs.1176	NM_005070	ENSG00000114923	SLC4A3	AE3|CAE3/BAE3|SLC2C	solute carrier family 4 member 3	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr2-2597	chr2	220555675	220556675	+	16.6	1000	Intergenic	Intergenic	63883	NR_048551	6508	Hs.1176	NM_005070	ENSG00000114923	SLC4A3	AE3|CAE3/BAE3|SLC2C	solute carrier family 4 member 3	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr2-2598	chr2	220591124	220592124	+	14.7	1000	Intergenic	Intergenic	99332	NR_048551	6508	Hs.1176	NM_005070	ENSG00000114923	SLC4A3	AE3|CAE3/BAE3|SLC2C	solute carrier family 4 member 3	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr2-2601	chr2	220954719	220955719	+	16	1000	Intergenic	MER113A|DNA|hAT-Charlie	-183933	NR_036228	100422959		NR_036228	ENSG00000266518	MIR4268	-	microRNA 4268	ncRNA	16	1.94	8.24742268	7.67E-08
chr2-2604	chr2	222508455	222509455	+	16.6	1000	Intergenic	Intergenic	-70033	NM_001304536	2043	Hs.371218	NM_004438	ENSG00000116106	EPHA4	HEK8|SEK|TYRO1	EPH receptor A4	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr2-2608	chr2	223184841	223186168	+	17.9	1327	"non-coding (NR_136639, exon 1 of 2)"	"non-coding (NR_136639, exon 1 of 2)"	124	NR_136641	440934	Hs.732732	NR_136638	ENSG00000237732	LOC440934	-	uncharacterized LOC440934	ncRNA	17.92	2.43	7.374485597	1.53E-08
chr2-2609	chr2	224969866	224970866	+	16	1000	Intergenic	ERVL-B4-int|LTR|ERVL	-66330	NM_006216	5270	Hs.38449	NM_006216	ENSG00000135919	SERPINE2	GDN|GDNPF|PI-7|PI7|PN-1|PN1|PNI	serpin family E member 2	protein-coding	16	0.97	16.49484536	3.54E-11
chr2-2610	chr2	225171937	225173774	+	33.3	1837	Intergenic	MER1B|DNA|hAT-Charlie	93856	NM_024785	79843	Hs.147585	NM_024785	ENSG00000124019	FAM124B	-	family with sequence similarity 124 member B	protein-coding	33.28	3.88	8.577319588	4.55E-16
chr2-2614	chr2	227355918	227357224	+	20.5	1306	Intergenic	Intergenic	166938	NR_049887	100847053		NR_049887	ENSG00000263363	MIR5702	-	microRNA 5702	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr2-2617	chr2	230447203	230448203	+	15.4	1000	"intron (NM_139072, intron 4 of 12)"	"intron (NM_139072, intron 4 of 12)"	131583	NM_139072	92737	Hs.234074	NM_139072	ENSG00000187957	DNER	UNQ26|bet	delta/notch like EGF repeat containing	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-2621	chr2	231763757	231764757	+	16	1000	"intron (NR_038238, intron 3 of 3)"	"intron (NR_038238, intron 3 of 3)"	12996	NR_038238	151484	Hs.559309	NR_038238	ENSG00000232520	LOC151484	-	uncharacterized LOC151484	ncRNA	16	2.91	5.498281787	4.98E-06
chr2-2623	chr2	231853065	231854065	+	16.6	1000	"intron (NR_033879, intron 4 of 5)"	"intron (NR_033879, intron 4 of 5)"	7182	NR_033879	348761	Hs.404807	NR_033879	ENSG00000238062	SPATA3-AS1	-	SPATA3 antisense RNA 1 (head to head)	ncRNA	16.64	1.46	11.39726027	2.99E-10
chr2-2625	chr2	232276585	232279162	+	37.1	2577	Intergenic	AluJb|SINE|Alu	17538	NM_145236	93010	Hs.299329	NM_145236	ENSG00000156966	B3GNT7	beta3GnT7	"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7"	protein-coding	37.12	4.37	8.494279176	1.21E-17
chr2-2632	chr2	233249198	233250679	+	23	1481	TTS (NR_028501)	TTS (NR_028501)	1816	NR_028501	347694	Hs.452575	NR_028501	ENSG00000244280	ECEL1P2	ECEL2	endothelin converting enzyme like 1 pseudogene 2	pseudo	23.04	2.91	7.917525773	4.85E-11
chr2-2634	chr2	233318665	233321223	+	36.5	2558	promoter-TSS (NM_001631)	promoter-TSS (NM_001631)	-878	NM_001631	248	Hs.37009	NM_001631	ENSG00000163295	ALPI	IAP	"alkaline phosphatase, intestinal"	protein-coding	36.48	1.94	18.80412371	8.81E-26
chr2-2636	chr2	233344324	233345759	+	22.4	1435	"intron (NM_004826, intron 17 of 17)"	"intron (NM_004826, intron 17 of 17)"	7528	NM_004826	9427	Hs.26880	NM_004826	ENSG00000171551	ECEL1	DA5D|DINE|ECEX|XCE	endothelin converting enzyme like 1	protein-coding	22.4	0.97	23.09278351	1.19E-17
chr2-2639	chr2	233837918	233839571	+	23.7	1653	"intron (NM_019850, intron 2 of 14)"	"intron (NM_019850, intron 2 of 14)"	-38580	NR_136325	101928881	Hs.570311	NR_136325	ENSG00000222001	LOC101928881	-	uncharacterized LOC101928881	ncRNA	23.68	4.85	4.882474227	1.15E-07
chr2-2640	chr2	234810117	234811117	+	16	1000	Intergenic	Intergenic	-15426	NM_024080	79054	Hs.366053	NM_024080	ENSG00000144481	TRPM8	LTRPC6|TRPP8	transient receptor potential cation channel subfamily M member 8	protein-coding	16	3.4	4.705882353	2.25E-05
chr2-2641	chr2	234846216	234848363	+	30.1	2147	"intron (NM_024080, intron 4 of 25)"	MER4A1|LTR|ERV1	21246	NM_024080	79054	Hs.366053	NM_024080	ENSG00000144481	TRPM8	LTRPC6|TRPP8	transient receptor potential cation channel subfamily M member 8	protein-coding	30.08	2.43	12.37860082	1.54E-17
chr2-2642	chr2	234855930	234857274	+	19.8	1344	"intron (NM_024080, intron 8 of 25)"	"intron (NM_024080, intron 8 of 25)"	30559	NM_024080	79054	Hs.366053	NM_024080	ENSG00000144481	TRPM8	LTRPC6|TRPP8	transient receptor potential cation channel subfamily M member 8	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr2-265	chr2	10443081	10448257	+	88.3	5176	"intron (NM_134421, intron 1 of 5)"	"intron (NM_134421, intron 1 of 5)"	1843	NM_134421	3241	Hs.580427	NM_002149	ENSG00000115756	HPCAL1	BDR1|HLP2|VILIP-3	hippocalcin like 1	protein-coding	88.33	14.08	6.2734375	8.12E-32
chr2-2653	chr2	235898582	235902796	+	51.8	4214	"intron (NM_014521, intron 1 of 5)"	"intron (NM_014521, intron 1 of 5)"	40061	NM_014521	23677	Hs.516777	NM_014521	ENSG00000130147	SH3BP4	BOG25|TTP	SH3 domain binding protein 4	protein-coding	51.85	11.16	4.646057348	1.06E-14
chr2-2654	chr2	236004429	236009429	+	64.6	5000	Intergenic	Intergenic	146301	NM_014521	23677	Hs.516777	NM_014521	ENSG00000130147	SH3BP4	BOG25|TTP	SH3 domain binding protein 4	protein-coding	64.65	16.02	4.035580524	1.18E-15
chr2-2657	chr2	236137903	236138903	+	16.6	1000	Intergenic	Intergenic	-264330	NM_001037131	116987	Hs.435039	NM_014914	ENSG00000157985	AGAP1	AGAP-1|CENTG2|GGAP1|cnt-g2	"ArfGAP with GTPase domain, ankyrin repeat and PH domain 1"	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr2-2658	chr2	236406111	236409340	+	41.6	3229	"intron (NM_001037131, intron 1 of 17)"	"intron (NM_001037131, intron 1 of 17)"	4992	NM_001244888	116987	Hs.435039	NM_014914	ENSG00000157985	AGAP1	AGAP-1|CENTG2|GGAP1|cnt-g2	"ArfGAP with GTPase domain, ankyrin repeat and PH domain 1"	protein-coding	41.61	5.82	7.149484536	5.30E-17
chr2-2664	chr2	236750110	236752807	+	37.8	2697	"intron (NM_001037131, intron 9 of 17)"	AluSx|SINE|Alu	325194	NM_001485	2637	Hs.184945	NM_001485	ENSG00000168505	GBX2	-	gastrulation brain homeobox 2	protein-coding	37.76	4.85	7.78556701	1.78E-16
chr2-2666	chr2	236868150	236869427	+	21.1	1277	"intron (NM_001037131, intron 12 of 17)"	"intron (NM_001037131, intron 12 of 17)"	207864	NM_001485	2637	Hs.184945	NM_001485	ENSG00000168505	GBX2	-	gastrulation brain homeobox 2	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr2-2671	chr2	237010080	237013750	+	42.9	3670	"intron (NM_001037131, intron 16 of 17)"	"intron (NM_001037131, intron 16 of 17)"	64737	NM_001485	2637	Hs.184945	NM_001485	ENSG00000168505	GBX2	-	gastrulation brain homeobox 2	protein-coding	42.89	6.8	6.307352941	5.66E-16
chr2-2673	chr2	237227073	237228073	+	16.6	1000	Intergenic	Intergenic	-54585	NM_212556	401036	Hs.639909	NM_212556	ENSG00000182177	ASB18	ASB-18	ankyrin repeat and SOCS box containing 18	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr2-2674	chr2	237247986	237249792	+	28.2	1806	"intron (NM_024726, intron 16 of 18)"	AluSz6|SINE|Alu	-75901	NM_212556	401036	Hs.639909	NM_212556	ENSG00000182177	ASB18	ASB-18	ankyrin repeat and SOCS box containing 18	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr2-2676	chr2	237509692	237513605	+	57	3913	Intergenic	Intergenic	33268	NM_020311	57007	Hs.471751	NM_020311	ENSG00000144476	ACKR3	CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1	atypical chemokine receptor 3	protein-coding	56.97	10.19	5.59077527	7.03E-19
chr2-2677	chr2	237536298	237537298	+	15.4	1000	Intergenic	Intergenic	58418	NM_020311	57007	Hs.471751	NM_020311	ENSG00000144476	ACKR3	CMKOR1|CXC-R7|CXCR-7|CXCR7|GPR159|RDC-1|RDC1	atypical chemokine receptor 3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-2679	chr2	237825534	237826534	+	16.6	1000	Intergenic	LTR8|LTR|ERV1	138776	NR_135202	93463	Hs.652810	NR_135202	ENSG00000124835	LOC93463	-	uncharacterized LOC93463	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr2-2683	chr2	238261304	238263859	+	39	2555	"intron (NM_057167, intron 23 of 42)"	MER4A1_|LTR|ERV1	60269	NM_057167	1293	Hs.233240	NM_004369	ENSG00000163359	COL6A3	BTHLM1|DYT27|UCMD1	collagen type VI alpha 3 chain	protein-coding	39.04	5.82	6.70790378	2.56E-15
chr2-2690	chr2	238785699	238786699	+	16.6	1000	"intron (NM_001308353, intron 3 of 3)"	"intron (NM_001308353, intron 3 of 3)"	18012	NM_001308353	10267	Hs.471783	NM_005855	ENSG00000132329	RAMP1	-	receptor activity modifying protein 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr2-2693	chr2	239470874	239471874	+	16.6	1000	Intergenic	MSTC|LTR|ERVL-MaLR	-7234	NR_037809	151171	Hs.652076	NR_037809	ENSG00000225493	LINC01107	-	long intergenic non-protein coding RNA 1107	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr2-2695	chr2	239595893	239598153	+	32.6	2260	Intergenic	L1M5|LINE|L1	-132883	NR_037809	151171	Hs.652076	NR_037809	ENSG00000225493	LINC01107	-	long intergenic non-protein coding RNA 1107	ncRNA	32.64	3.88	8.412371134	3.92E-15
chr2-2696	chr2	239762424	239764879	+	40.3	2455	"intron (NM_001271893, intron 1 of 1)"	"intron (NM_001271893, intron 1 of 1)"	6978	NM_001271893	117581	Hs.422585	NM_057179	ENSG00000233608	TWIST2	AMS|BBRSAY|DERMO1|FFDD3|SETLSS|bHLHa39	twist family bHLH transcription factor 2	protein-coding	40.33	7.77	5.19047619	6.49E-13
chr2-270	chr2	27939135	27940958	+	32	1823	Intergenic	Intergenic	-1447	NR_135200	100129995	Hs.515878	NR_135200	ENSG00000205334	LINC01460	-	long intergenic non-protein coding RNA 1460	ncRNA	32	4.85	6.597938144	5.03E-13
chr2-2701	chr2	240627482	240628482	+	16	1000	Intergenic	CT-rich|Low_complexity|Low_complexity	-56572	NR_037808	150935	Hs.555582	NR_037808		LOC150935	-	uncharacterized LOC150935	ncRNA	16	2.91	5.498281787	4.98E-06
chr2-2702	chr2	240648486	240649486	+	16.6	1000	Intergenic	Intergenic	-35568	NR_037808	150935	Hs.555582	NR_037808		LOC150935	-	uncharacterized LOC150935	ncRNA	16.64	1.46	11.39726027	2.99E-10
chr2-2705	chr2	240729724	240730724	+	16	1000	Intergenic	L1ME3E|LINE|L1	45670	NR_037808	150935	Hs.555582	NR_037808		LOC150935	-	uncharacterized LOC150935	ncRNA	16	1.94	8.24742268	7.67E-08
chr2-2706	chr2	240978348	240979348	+	15.4	1000	Intergenic	L1MA4|LINE|L1	6641	NM_173351	150681	Hs.626616	NM_173351	ENSG00000178586	OR6B3	OR6B3P|OR6B3Q	olfactory receptor family 6 subfamily B member 3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-2711	chr2	241135914	241136914	+	16	1000	Intergenic	Intergenic	-56341	NM_148961	150677	Hs.148586	NM_148961	ENSG00000178602	OTOS	OTOSP	otospiralin	protein-coding	16	1.94	8.24742268	7.67E-08
chr2-2712	chr2	241142285	241143285	+	16.6	1000	Intergenic	Intergenic	-62712	NM_148961	150677	Hs.148586	NM_148961	ENSG00000178602	OTOS	OTOSP	otospiralin	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr2-2715	chr2	241296088	241297088	+	16.6	1000	Intergenic	Intergenic	-78527	NM_002081	2817	Hs.328232	NM_002081	ENSG00000063660	GPC1	glypican	glypican 1	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr2-2718	chr2	241586545	241587545	+	16.6	1000	Intergenic	CpG	22383	NM_005301	2859	Hs.112218	NM_005301	ENSG00000178623	GPR35	-	G protein-coupled receptor 35	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr2-2719	chr2	241690169	241691565	+	17.9	1396	"intron (NM_001330290, intron 26 of 47)"	"intron (NM_001330290, intron 26 of 47)"	59605	NM_198998	375318	Hs.534650	NM_198998	ENSG00000184945	AQP12A	AQP-12|AQP12|AQPX2	aquaporin 12A	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr2-2723	chr2	241837162	241838162	+	15.4	1000	Intergenic	Intergenic	-2089	NM_001085437	79919	Hs.193745	NM_024861	ENSG00000172478	C2orf54	-	chromosome 2 open reading frame 54	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-2726	chr2	241895216	241899508	+	60.8	4292	"intron (NR_033841, intron 5 of 8)"	"intron (NR_033841, intron 5 of 8)"	9506	NR_033841	200772	Hs.647893	NR_033841	ENSG00000233392	LOC200772	-	uncharacterized LOC200772	ncRNA	60.81	4.85	12.53814433	1.52E-34
chr2-2727	chr2	242786463	242787772	+	19.8	1309	Intergenic	Intergenic	13941	NM_005018	5133	Hs.158297	NM_005018	ENSG00000188389	PDCD1	CD279|PD-1|PD1|SLEB2|hPD-1|hPD-l|hSLE1	programmed cell death 1	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr2-273	chr2	46523028	46527310	+	105	4282	"intron (NM_001430, intron 1 of 15)"	CpG	628	NM_001430	2034	Hs.468410	NM_001430	ENSG00000116016	EPAS1	ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73	endothelial PAS domain protein 1	protein-coding	104.97	15.05	6.974750831	1.09E-40
chr2-2732	chr2	1083082	1084707	+	25	1625	"intron (NM_018968, intron 2 of 16)"	"intron (NM_018968, intron 2 of 16)"	-136816	NR_136151	101060391	Hs.120377	NR_136151		LOC101060391	-	uncharacterized LOC101060391	ncRNA	24.96	2.91	8.577319588	5.77E-12
chr2-2734	chr2	1096631	1099554	+	39.7	2923	"intron (NM_018968, intron 4 of 16)"	"intron (NM_018968, intron 4 of 16)"	-151014	NR_136151	101060391	Hs.120377	NR_136151		LOC101060391	-	uncharacterized LOC101060391	ncRNA	39.69	9.22	4.304772234	4.47E-11
chr2-2738	chr2	1424606	1425606	+	14.7	1000	"intron (NM_175721, intron 1 of 14)"	"intron (NM_175721, intron 1 of 14)"	6926	NM_175721	7173	Hs.467554	NM_000547	ENSG00000115705	TPO	MSA|TDH2A|TPX	thyroid peroxidase	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr2-2739	chr2	1557738	1558738	+	16	1000	Intergenic	Intergenic	140058	NM_175721	7173	Hs.467554	NM_000547	ENSG00000115705	TPO	MSA|TDH2A|TPX	thyroid peroxidase	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-2746	chr2	2177428	2179300	+	31.4	1872	"intron (NM_001329845, intron 2 of 24)"	"intron (NM_001329845, intron 2 of 24)"	-144640	NR_024468	730811	Hs.629472	NR_024468	ENSG00000225619	MYT1L-AS1	-	MYT1L antisense RNA 1	ncRNA	31.36	6.8	4.611764706	2.53E-09
chr2-2748	chr2	2230550	2231550	+	16	1000	"intron (NM_001329845, intron 2 of 24)"	L2|LINE|L2	-91954	NR_024468	730811	Hs.629472	NR_024468	ENSG00000225619	MYT1L-AS1	-	MYT1L antisense RNA 1	ncRNA	16	3.4	4.705882353	2.25E-05
chr2-2749	chr2	2519494	2520494	+	16	1000	Intergenic	Intergenic	-184909	NM_015025	23040	Hs.434418	NM_015025	ENSG00000186487	MYT1L	MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L	myelin transcription factor 1 like	protein-coding	16	1.46	10.95890411	3.44E-09
chr2-2757	chr2	3755515	3756877	+	20.5	1362	"intron (NM_001287444, intron 2 of 10)"	"intron (NM_001287444, intron 2 of 10)"	5014	NM_001287444	728597	Hs.304233	NM_001287444	ENSG00000214866	DCDC2C	-	doublecortin domain containing 2C	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr2-2763	chr2	6449318	6450882	+	23	1564	Intergenic	Intergenic	65454	NR_110251	101929390	Hs.434407	NR_110251	ENSG00000227007	LINC01247	-	long intergenic non-protein coding RNA 1247	ncRNA	23.04	0.97	23.75257732	5.03E-19
chr2-2766	chr2	6543323	6544323	+	14.1	1000	Intergenic	Tigger1|DNA|TcMar-Tigger	-28269	NR_110251	101929390	Hs.434407	NR_110251	ENSG00000227007	LINC01247	-	long intergenic non-protein coding RNA 1247	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr2-2768	chr2	6658618	6659618	+	16	1000	Intergenic	MLT2D|LTR|ERVL	114801	NR_110500	102800315	Hs.729713	NR_110498	ENSG00000236172	LINC01246	-	long intergenic non-protein coding RNA 1246	ncRNA	16	1.94	8.24742268	7.67E-08
chr2-2769	chr2	8597170	8598170	+	15.4	1000	Intergenic	Intergenic	126252	NR_110257	101929567	Hs.634706	NR_110257	ENSG00000236008	LINC01814	-	long intergenic non-protein coding RNA 1814	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr2-2770	chr2	9153320	9154988	+	23.7	1668	Intergenic	HAL1|LINE|L1	-10275	NR_135604	129642	Hs.467634	NM_138799	ENSG00000143797	MBOAT2	LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2	membrane bound O-acyltransferase domain containing 2	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr2-2773	chr2	9236169	9237169	+	15.4	1000	Intergenic	Intergenic	-92790	NR_135604	129642	Hs.467634	NM_138799	ENSG00000143797	MBOAT2	LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2	membrane bound O-acyltransferase domain containing 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-2774	chr2	9241478	9243427	+	30.1	1949	Intergenic	MIR|SINE|MIR	-98573	NR_135604	129642	Hs.467634	NM_138799	ENSG00000143797	MBOAT2	LPAAT|LPCAT4|LPEAT|LPLAT 2|OACT2	membrane bound O-acyltransferase domain containing 2	protein-coding	30.08	2.91	10.33676976	7.13E-16
chr2-2776	chr2	9246137	9247137	+	14.1	1000	Intergenic	Intergenic	-100257	NM_001135191	8853	Hs.555902	NM_003887	ENSG00000151693	ASAP2	AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 2"	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr2-2777	chr2	9307729	9308729	+	14.7	1000	Intergenic	MER41B|LTR|ERV1	-38665	NM_001135191	8853	Hs.555902	NM_003887	ENSG00000151693	ASAP2	AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 2"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-2778	chr2	9358508	9359508	+	15.4	1000	"intron (NM_001135191, intron 1 of 26)"	"intron (NM_001135191, intron 1 of 26)"	12114	NM_003887	8853	Hs.555902	NM_003887	ENSG00000151693	ASAP2	AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 2"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-2779	chr2	9418924	9419924	+	14.7	1000	"intron (NM_001135191, intron 1 of 26)"	"intron (NM_001135191, intron 1 of 26)"	72530	NM_003887	8853	Hs.555902	NM_003887	ENSG00000151693	ASAP2	AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 2"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-2785	chr2	9950382	9951382	+	16	1000	Intergenic	AluSc5|SINE|Alu	-32689	NM_001318977	9014	Hs.584833	NM_005680	ENSG00000115750	TAF1B	MGC:9349|RAF1B|RAFI63|SL1|TAFI63	"TATA-box binding protein associated factor, RNA polymerase I subunit B"	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-2788	chr2	10200447	10206024	+	76.2	5577	"intron (NM_001037160, intron 2 of 2)"	"intron (NM_001037160, intron 2 of 2)"	17303	NM_001037160	192668	Hs.27092	NM_001037160	ENSG00000205795	CYS1	-	cystin 1	protein-coding	76.17	16.5	4.616363636	7.44E-21
chr2-2791	chr2	10384406	10385406	+	16.6	1000	Intergenic	L1MD2|LINE|L1	-52109	NR_036222	100422929		NR_036222	ENSG00000265418	MIR4261	-	microRNA 4261	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr2-2793	chr2	10641164	10647726	+	92.2	6562	Intergenic	AluSg|SINE|Alu	54591	NR_110597	101929715	Hs.634550	NR_110597		LOC101929715	-	uncharacterized LOC101929715	ncRNA	92.17	20.39	4.520353114	8.96E-25
chr2-2798	chr2	10997726	11003330	+	89.6	5604	Intergenic	MER44B|DNA|TcMar-Tigger	-17865	NR_110575	101929733	Hs.736697	NR_110575	ENSG00000271952	LINC01954	-	long intergenic non-protein coding RNA 1954	ncRNA	89.61	13.11	6.835240275	1.80E-34
chr2-2801	chr2	11155165	11156165	+	16	1000	Intergenic	Intergenic	103602	NM_002236	3754	Hs.23735	NM_002236	ENSG00000162975	KCNF1	IK8|KCNF|KV5.1|kH1	potassium voltage-gated channel modifier subfamily F member 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr2-2804	chr2	11158142	11159142	+	14.7	1000	Intergenic	Intergenic	106579	NM_002236	3754	Hs.23735	NM_002236	ENSG00000162975	KCNF1	IK8|KCNF|KV5.1|kH1	potassium voltage-gated channel modifier subfamily F member 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr2-2805	chr2	11166263	11167263	+	14.7	1000	Intergenic	Intergenic	105539	NR_040080	285150	Hs.329841	NM_182586	ENSG00000145063	FLJ33534	-	uncharacterized LOC285150	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr2-2807	chr2	11493272	11494272	+	14.7	1000	Intergenic	Intergenic	-8239	NM_001321643	9475	Hs.681743	NM_004850	ENSG00000134318	ROCK2	ROCK-II	Rho associated coiled-coil containing protein kinase 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-2811	chr2	12062325	12063325	+	14.7	1000	Intergenic	Intergenic	-84417	NR_110197	100506457	Hs.197824	NR_110196	ENSG00000224184	MIR3681HG	-	MIR3681 host gene	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr2-2814	chr2	15884239	15885239	+	14.7	1000	Intergenic	Intergenic	53833	NR_110201	101926966	Hs.502835	NR_110201	ENSG00000231031	LINC01804	-	long intergenic non-protein coding RNA 1804	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr2-2818	chr2	16942010	16943010	+	15.4	1000	Intergenic	Intergenic	-95376	NM_030797	81553	Hs.467769	NM_030797	ENSG00000197872	FAM49A	-	family with sequence similarity 49 member A	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-2820	chr2	20411789	20412789	+	16	1000	"intron (NM_001006946, intron 2 of 5)"	"intron (NM_001006946, intron 2 of 5)"	12638	NM_002997	6382	Hs.224607	NM_002997	ENSG00000115884	SDC1	CD138|SDC|SYND1|syndecan	syndecan 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-2821	chr2	20422168	20427178	+	78.7	5010	"5' UTR (NM_002997, exon 1 of 5)"	"5' UTR (NM_002997, exon 1 of 5)"	254	NM_002997	6382	Hs.224607	NM_002997	ENSG00000115884	SDC1	CD138|SDC|SYND1|syndecan	syndecan 1	protein-coding	78.73	9.71	8.108135942	5.35E-34
chr2-2825	chr2	20785897	20787875	+	32	1978	Intergenic	L1ME4a|LINE|L1	5422	NR_046836	100874343	Hs.591546	NR_046836	ENSG00000231948	HS1BP3-IT1	-	HS1BP3 intronic transcript 1	ncRNA	32	4.37	7.322654462	5.18E-14
chr2-2828	chr2	23763620	23764620	+	14.7	1000	"intron (NM_052920, intron 2 of 13)"	(TGGA)n|Simple_repeat|Simple_repeat	155822	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr2-2832	chr2	23801728	23802728	+	16	1000	"intron (NM_052920, intron 3 of 13)"	L2|LINE|L2	193930	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	16	2.91	5.498281787	4.98E-06
chr2-2835	chr2	24272151	24273861	+	30.7	1710	"intron (NM_054033, intron 1 of 3)"	CpG	435	NM_004116	2281	Hs.709461	NM_004116	ENSG00000119782	FKBP1B	FKBP12.6|FKBP1L|OTK4|PKBP1L|PPIase	FK506 binding protein 1B	protein-coding	30.72	2.91	10.55670103	6.73E-17
chr2-2836	chr2	25219660	25220660	+	15.4	1000	"intron (NR_034113, intron 1 of 2)"	"intron (NR_034113, intron 1 of 2)"	25179	NR_034113	729723	Hs.436366	NR_034113	ENSG00000224165	DNAJC27-AS1	-	DNAJC27 antisense RNA 1	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr2-2838	chr2	26720961	26721961	+	15.4	1000	"intron (NM_001287489, intron 8 of 45)"	"intron (NM_001287489, intron 8 of 45)"	-20551	NM_004802	9381	Hs.91608	NM_004802	ENSG00000115155	OTOF	AUNB1|DFNB6|DFNB9|FER1L2|NSRD9	otoferlin	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr2-2840	chr2	27135041	27136336	+	20.5	1295	"intron (NM_020134, intron 2 of 12)"	"intron (NM_020134, intron 2 of 12)"	-57551	NM_012326	22924	Hs.515860	NM_012326	ENSG00000084764	MAPRE3	EB3|EBF3|EBF3-S|RP3	microtubule associated protein RP/EB family member 3	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr2-2844	chr2	27485513	27488425	+	62.1	2912	"intron (NM_001318949, intron 1 of 8)"	CpG-14833	-1009	NM_003459	7781	Hs.467981	NM_003459	ENSG00000115194	SLC30A3	ZNT3	solute carrier family 30 member 3	protein-coding	62.09	8.74	7.104118993	1.11E-24
chr2-2845	chr2	27718674	27720056	+	20.5	1382	promoter-TSS (NM_001486)	promoter-TSS (NM_001486)	-341	NM_001486	2646	Hs.89771	NM_001486	ENSG00000084734	GCKR	FGQTL5|GKRP	glucokinase regulator	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr2-2846	chr2	27935221	27936221	+	15.4	1000	"intron (NR_135200, intron 1 of 1)"	L2|LINE|L2	2878	NR_135200	100129995	Hs.515878	NR_135200	ENSG00000205334	LINC01460	-	long intergenic non-protein coding RNA 1460	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr2-2851	chr2	29507268	29508268	+	15.4	1000	"intron (NM_004304, intron 9 of 28)"	"intron (NM_004304, intron 9 of 28)"	169476	NM_024692	79745	Hs.122927	NM_024692	ENSG00000115295	CLIP4	RSNL2	CAP-Gly domain containing linker protein family member 4	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr2-2853	chr2	29639485	29641472	+	35.8	1987	"intron (NM_004304, intron 4 of 28)"	"intron (NM_004304, intron 4 of 28)"	57765	NR_136317	105374389	Hs.196534	NR_136317		LOC105374389	-	uncharacterized LOC105374389	ncRNA	35.84	4.37	8.201372998	1.03E-16
chr2-2856	chr2	29701952	29702952	+	16	1000	"intron (NM_004304, intron 4 of 28)"	"intron (NM_004304, intron 4 of 28)"	-4209	NR_136317	105374389	Hs.196534	NR_136317		LOC105374389	-	uncharacterized LOC105374389	ncRNA	16	3.4	4.705882353	2.25E-05
chr2-286	chr2	121317966	121319217	+	25.6	1251	Intergenic	MIR3|SINE|MIR	-94666	NR_027181	84931	Hs.334519	NM_032845	ENSG00000280409	LINC01101	-	long intergenic non-protein coding RNA 1101	ncRNA	25.6	2.91	8.797250859	6.53E-13
chr2-2860	chr2	30425519	30427413	+	33.9	1894	Intergenic	Intergenic	-27931	NM_030915	81606	Hs.567598	NM_030915	ENSG00000213626	LBH	-	limb bud and heart development	protein-coding	33.92	5.82	5.828178694	4.04E-12
chr2-2861	chr2	30452385	30454205	+	32.6	1820	Intergenic	Intergenic	-1102	NM_030915	81606	Hs.567598	NM_030915	ENSG00000213626	LBH	-	limb bud and heart development	protein-coding	32.64	6.8	4.8	5.32E-10
chr2-2864	chr2	31152828	31153828	+	15.4	1000	"intron (NM_001329097, intron 10 of 12)"	"intron (NM_001329097, intron 10 of 12)"	-123017	NM_144575	92291	Hs.660911	NM_144575	ENSG00000162949	CAPN13	-	calpain 13	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr2-2867	chr2	33171594	33173833	+	35.2	2239	"exon (NM_206943, exon 1 of 34)"	"exon (NM_206943, exon 1 of 34)"	344	NM_206943	4052	Hs.619315	NM_000627	ENSG00000049323	LTBP1	-	latent transforming growth factor beta binding protein 1	protein-coding	35.2	4.85	7.257731959	1.02E-14
chr2-2868	chr2	33689453	33690453	+	15.4	1000	"intron (NM_170672, intron 2 of 18)"	Tigger1|DNA|TcMar-Tigger	-11368	NM_001139488	25780	Hs.143674	NM_015376	ENSG00000152689	RASGRP3	GRP3	RAS guanyl releasing protein 3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-2873	chr2	36667031	36668031	+	15.4	1000	"intron (NM_016441, intron 2 of 16)"	"intron (NM_016441, intron 2 of 16)"	84161	NM_016441	51232	Hs.699247	NM_016441	ENSG00000150938	CRIM1	CRIM-1|S52	cysteine rich transmembrane BMP regulator 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr2-2875	chr2	36912227	36913227	+	15.4	1000	Intergenic	Intergenic	-11106	NM_053276	5212	Hs.137415	NM_053276	ENSG00000205221	VIT	-	vitrin	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-2876	chr2	36964807	36965807	+	16	1000	"intron (NM_053276, intron 3 of 15)"	"intron (NM_053276, intron 3 of 15)"	41474	NM_001177969	5212	Hs.137415	NM_053276	ENSG00000205221	VIT	-	vitrin	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-2878	chr2	37887286	37888286	+	16	1000	"intron (NM_001270436, intron 1 of 1)"	"intron (NM_001270436, intron 1 of 1)"	11556	NM_006449	10602	Hs.369574	NM_006449	ENSG00000163171	CDC42EP3	BORG2|CEP3|UB1	CDC42 effector protein 3	protein-coding	16	1.94	8.24742268	7.67E-08
chr2-2880	chr2	38115704	38116704	+	15.4	1000	Intergenic	AluSx3|SINE|Alu	-13198	NR_110012	101929559	Hs.468200	NR_110011	ENSG00000237803	LINC00211	NCRNA00211	long intergenic non-protein coding RNA 211	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr2-2881	chr2	38344148	38345148	+	16	1000	Intergenic	MLT1L|LTR|ERVL-MaLR	-13599	NR_027252	285154	Hs.353894	NM_173652	ENSG00000232973	CYP1B1-AS1	C2orf58	CYP1B1 antisense RNA 1	ncRNA	16	1.94	8.24742268	7.67E-08
chr2-2885	chr2	39134049	39135049	+	16	1000	Intergenic	Intergenic	-11955	NM_001145451	100271715	Hs.99841	NM_001145451	ENSG00000214694	ARHGEF33	-	Rho guanine nucleotide exchange factor 33	protein-coding	16	2.43	6.58436214	7.90E-07
chr2-2887	chr2	42081663	42083233	+	26.2	1570	Intergenic	Intergenic	-22247	NR_033996	388942	Hs.631883	NR_033996	ENSG00000214691	LINC01913	-	long intergenic non-protein coding RNA 1913	ncRNA	26.24	3.88	6.762886598	1.00E-10
chr2-2893	chr2	42295920	42296920	+	14.1	1000	Intergenic	Intergenic	21259	NM_138370	91461	Hs.408542	NM_138370	ENSG00000162878	PKDCC	SGK493|Vlk	"protein kinase domain containing, cytoplasmic"	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr2-2894	chr2	43093641	43094641	+	15.4	1000	Intergenic	MIR3|SINE|MIR	-74390	NM_012205	23498	Hs.368805	NM_012205	ENSG00000162882	HAAO	3-HAO|HAO	"3-hydroxyanthranilate 3,4-dioxygenase"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-2895	chr2	45028988	45034184	+	89	5196	Intergenic	Intergenic	137060	NR_103785	100506108	Hs.503113	NR_103785	ENSG00000236502	SIX3-AS1	SIX3OS	SIX3 antisense RNA 1	ncRNA	88.97	16.5	5.392121212	7.36E-28
chr2-29	chr2	91669554	91671620	+	75.5	2066	Intergenic	CpG	177388	NR_027238	654342	Hs.469287	NR_027238		LOC654342	-	lymphocyte-specific protein 1 pseudogene	pseudo	75.53	5.82	12.97766323	5.47E-44
chr2-2906	chr2	45492038	45493038	+	16	1000	Intergenic	Intergenic	-10458	NR_033831	400952	Hs.468368	NR_033831	ENSG00000205054	LINC01121	UNQ6975	long intergenic non-protein coding RNA 1121	ncRNA	16	3.4	4.705882353	2.25E-05
chr2-2913	chr2	45932735	45933735	+	14.7	1000	"intron (NM_005400, intron 1 of 14)"	"intron (NM_005400, intron 1 of 14)"	54192	NM_005400	5581	Hs.580351	NM_005400	ENSG00000171132	PRKCE	PKCE|nPKC-epsilon	protein kinase C epsilon	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-2916	chr2	46066117	46067117	+	15.4	1000	"intron (NM_005400, intron 1 of 14)"	"intron (NM_005400, intron 1 of 14)"	187574	NM_005400	5581	Hs.580351	NM_005400	ENSG00000171132	PRKCE	PKCE|nPKC-epsilon	protein kinase C epsilon	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-2920	chr2	46272468	46273468	+	16	1000	"intron (NM_005400, intron 10 of 14)"	AluSz|SINE|Alu	-251573	NM_001430	2034	Hs.468410	NM_001430	ENSG00000116016	EPAS1	ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73	endothelial PAS domain protein 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-2921	chr2	46458692	46460564	+	28.2	1872	Intergenic	AluSx1|SINE|Alu	-64913	NM_001430	2034	Hs.468410	NM_001430	ENSG00000116016	EPAS1	ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73	endothelial PAS domain protein 1	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr2-2922	chr2	46529755	46531180	+	22.4	1425	"intron (NM_001430, intron 1 of 15)"	"intron (NM_001430, intron 1 of 15)"	5926	NM_001430	2034	Hs.468410	NM_001430	ENSG00000116016	EPAS1	ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73	endothelial PAS domain protein 1	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr2-2926	chr2	46707585	46708585	+	15.4	1000	"intron (NM_001145051, intron 2 of 2)"	"intron (NM_001145051, intron 2 of 2)"	1381	NM_001145051	388946	Hs.733348	NM_001145051	ENSG00000187600	TMEM247	-	transmembrane protein 247	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-2928	chr2	47008391	47009391	+	15.4	1000	Intergenic	Intergenic	-34916	NR_034099	388948	Hs.728895	NR_034099	ENSG00000222005	LINC01118	-	long intergenic non-protein coding RNA 1118	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr2-2930	chr2	47463646	47464646	+	14.7	1000	"intron (NR_110207, intron 1 of 2)"	"intron (NR_110207, intron 1 of 2)"	-60071	NM_001305625	805	Hs.468442	NM_001743	ENSG00000143933	CALM2	CAMII|LQT15|PHKD|PHKD2|caM	calmodulin 2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr2-2931	chr2	47476902	47477902	+	14.7	1000	"intron (NR_110207, intron 1 of 2)"	"intron (NR_110207, intron 1 of 2)"	-73327	NM_001305625	805	Hs.468442	NM_001743	ENSG00000143933	CALM2	CAMII|LQT15|PHKD|PHKD2|caM	calmodulin 2	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr2-2935	chr2	55166229	55167229	+	16.6	1000	"intron (NM_001039753, intron 27 of 40)"	"intron (NM_001039753, intron 27 of 40)"	70741	NM_007008	57142	Hs.637850	NM_007008	ENSG00000115310	RTN4	ASY|NI220/250|NOGO|NOGO-A|NOGOC|NSP|NSP-CL|Nbla00271|Nbla10545|Nogo-B|Nogo-C|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C	reticulon 4	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-2939	chr2	60805177	60806177	+	15.4	1000	Intergenic	Intergenic	-25044	NM_138559	53335	Hs.370549	NM_018014	ENSG00000119866	BCL11A	BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856	B-cell CLL/lymphoma 11A	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-2940	chr2	61056841	61057841	+	15.4	1000	Intergenic	Intergenic	51108	NR_033980	400957	Hs.170358	NR_033980	ENSG00000228414	LINC01185	-	long intergenic non-protein coding RNA 1185	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr2-2941	chr2	64512283	64513283	+	15.4	1000	Intergenic	MER5A1|DNA|hAT-Charlie	-55110	NR_039632	100616265		NR_039632	ENSG00000283222	MIR4433A	MIR4433|hsa-mir-4433a	microRNA 4433a	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr2-2943	chr2	64612090	64613090	+	15.4	1000	Intergenic	Intergenic	-44608	NR_106995	102465833		NR_106995	ENSG00000264297	MIR4433B	hsa-mir-4433b	microRNA 4433b	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr2-2944	chr2	64671015	64672015	+	15.4	1000	Intergenic	L2b|LINE|L2	-9812	NM_014181	29094	Hs.372208	NM_014181	ENSG00000119862	LGALSL	GRP|HSPC159	galectin like	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr2-295	chr2	176977007	176978576	+	30.1	1569	Intergenic	Intergenic	-3701	NM_002148	3236	Hs.123070	NM_002148	ENSG00000128710	HOXD10	HOX4|HOX4D|HOX4E|Hox-4.4	homeobox D10	protein-coding	30.08	6.8	4.423529412	1.16E-08
chr2-2950	chr2	65664200	65665923	+	27.5	1723	Intergenic	Intergenic	-5405	NM_181784	200734	Hs.59332	NM_181784	ENSG00000198369	SPRED2	Spred-2	sprouty related EVH1 domain containing 2	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr2-2951	chr2	65677745	65678745	+	14.1	1000	Intergenic	L2a|LINE|L2	-18589	NM_181784	200734	Hs.59332	NM_181784	ENSG00000198369	SPRED2	Spred-2	sprouty related EVH1 domain containing 2	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr2-2954	chr2	66668312	66669737	+	19.2	1425	"intron (NM_002398, intron 5 of 12)"	"intron (NM_002398, intron 5 of 12)"	-1562	NR_046625	100873998	Hs.734698	NR_046625	ENSG00000230749	MEIS1-AS2	MEIS1-AS1	MEIS1 antisense RNA 2	ncRNA	19.2	0.97	19.79381443	5.65E-15
chr2-2956	chr2	66804374	66805633	+	19.2	1259	"intron (NR_110156, intron 1 of 5)"	"intron (NR_110156, intron 1 of 5)"	3841	NR_110156	100507073	Hs.667940	NR_110156	ENSG00000232046	LINC01798	-	long intergenic non-protein coding RNA 1798	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr2-2963	chr2	68951085	68952085	+	14.1	1000	Intergenic	Intergenic	-10328	NM_001007231	9938	Hs.531807	NM_014882	ENSG00000163219	ARHGAP25	HEL-S-308|KAIA0053	Rho GTPase activating protein 25	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr2-2964	chr2	69216823	69217823	+	15.4	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	15618	NM_019617	56287	Hs.69319	NM_019617	ENSG00000169605	GKN1	AMP18|BRICD1|CA11|FOV|foveolin	gastrokine 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-2966	chr2	69497977	69498977	+	15.4	1000	Intergenic	Intergenic	115909	NM_001244710	2673	Hs.580300	NM_002056	ENSG00000198380	GFPT1	CMS12|CMSTA1|GFA|GFAT|GFAT 1|GFAT1|GFAT1m|GFPT|GFPT1L|MSLG	glutamine--fructose-6-phosphate transaminase 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-2969	chr2	70779932	70782605	+	36.5	2673	promoter-TSS (NM_001308158)	promoter-TSS (NM_001308158)	-121	NM_001099691	7039	Hs.170009	NM_003236	ENSG00000163235	TGFA	TFGA	transforming growth factor alpha	protein-coding	36.48	4.85	7.521649485	1.37E-15
chr2-2970	chr2	70867882	70868882	+	14.1	1000	Intergenic	Intergenic	-87235	NM_001099691	7039	Hs.170009	NM_003236	ENSG00000163235	TGFA	TFGA	transforming growth factor alpha	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr2-2972	chr2	71048891	71050251	+	21.8	1360	Intergenic	Intergenic	-1839	NM_001321308	165530	Hs.681239	NM_173535	ENSG00000152672	CLEC4F	CLECSF13|KCLR	C-type lectin domain family 4 member F	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr2-2974	chr2	71118119	71119773	+	23.7	1654	Intergenic	Intergenic	3945	NR_126384	104355141	Hs.291539	NR_126384	ENSG00000237751	LINC01143	-	long intergenic non-protein coding RNA 1143	ncRNA	23.68	4.37	5.418764302	2.46E-08
chr2-2978	chr2	71812465	71813465	+	14.7	1000	"intron (NM_001130978, intron 30 of 55)"	"intron (NM_001130978, intron 30 of 55)"	119133	NM_001130987	8291	Hs.252180	NM_003494	ENSG00000135636	DYSF	FER1L1|LGMD2B|MMD1	dysferlin	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr2-2979	chr2	71857147	71858147	+	15.4	1000	"intron (NM_001130978, intron 41 of 55)"	"intron (NM_001130978, intron 41 of 55)"	163815	NM_001130987	8291	Hs.252180	NM_003494	ENSG00000135636	DYSF	FER1L1|LGMD2B|MMD1	dysferlin	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-2980	chr2	71864772	71865772	+	16	1000	"intron (NM_001130978, intron 41 of 55)"	"intron (NM_001130978, intron 41 of 55)"	171440	NM_001130987	8291	Hs.252180	NM_003494	ENSG00000135636	DYSF	FER1L1|LGMD2B|MMD1	dysferlin	protein-coding	16	3.4	4.705882353	2.25E-05
chr2-2987	chr2	73322489	73323489	+	14.7	1000	"intron (NM_015470, intron 1 of 4)"	"intron (NM_015470, intron 1 of 4)"	17157	NM_015470	26056	Hs.24557	NM_015470	ENSG00000135631	RAB11FIP5	GAF1|RIP11|pp75	RAB11 family interacting protein 5	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-2988	chr2	73349692	73350962	+	19.2	1270	Intergenic	Intergenic	-10181	NM_015470	26056	Hs.24557	NM_015470	ENSG00000135631	RAB11FIP5	GAF1|RIP11|pp75	RAB11 family interacting protein 5	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr2-2989	chr2	73596520	73597520	+	15.4	1000	Intergenic	L2a|LINE|L2	-15866	NM_015120	7840	Hs.184720	NM_015120	ENSG00000116127	ALMS1	ALSS	"ALMS1, centrosome and basal body associated protein"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-299	chr2	238469679	238470935	+	22.4	1256	Intergenic	Intergenic	-4910	NM_015893	51052	Hs.247710	NM_015893	ENSG00000071677	PRLH	PRH|PRRP	prolactin releasing hormone	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr2-2990	chr2	74641789	74643461	+	27.5	1672	"exon (NM_001145054, exon 4 of 4)"	"exon (NM_001145054, exon 4 of 4)"	2219	NM_001145054	388963	Hs.445377	NM_001145054	ENSG00000159239	C2orf81	hCG40743	chromosome 2 open reading frame 81	protein-coding	27.52	4.37	6.297482838	1.19E-10
chr2-2992	chr2	74810085	74811085	+	14.7	1000	"intron (NM_001281295, intron 4 of 6)"	"intron (NM_001281295, intron 4 of 6)"	29298	NM_001318868	1796	Hs.103854	NM_001381	ENSG00000115325	DOK1	P62DOK|pp62	docking protein 1	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr2-3004	chr2	75848679	75851022	+	37.1	2343	Intergenic	Intergenic	-24059	NM_014763	9801	Hs.44024	NM_014763	ENSG00000115364	MRPL19	L19mt|MRP-L15|MRP-L19|MRPL15|RLX1|RPML15	mitochondrial ribosomal protein L19	protein-coding	37.12	7.28	5.098901099	3.68E-12
chr2-3007	chr2	85060567	85061567	+	15.4	1000	"intron (NM_001277053, intron 4 of 6)"	"intron (NM_001277053, intron 4 of 6)"	47302	NM_001307978	129293	Hs.469134	NM_001080824	ENSG00000186854	TRABD2A	C2orf89|TIKI1	TraB domain containing 2A	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-3010	chr2	85086152	85088107	+	35.2	1955	"intron (NM_001307978, intron 2 of 4)"	AluJo|SINE|Alu	21240	NM_001307978	129293	Hs.469134	NM_001080824	ENSG00000186854	TRABD2A	C2orf89|TIKI1	TraB domain containing 2A	protein-coding	35.2	5.82	6.048109966	6.75E-13
chr2-3011	chr2	85097976	85099761	+	29.4	1785	"intron (NM_001307978, intron 1 of 4)"	AluSg|SINE|Alu	9501	NM_001307978	129293	Hs.469134	NM_001080824	ENSG00000186854	TRABD2A	C2orf89|TIKI1	TraB domain containing 2A	protein-coding	29.44	1.94	15.17525773	1.31E-19
chr2-3014	chr2	85522383	85523383	+	14.1	1000	"intron (NM_031283, intron 4 of 11)"	L1MC4|LINE|L1	32536	NM_001206840	10618	Hs.593382	NM_006464	ENSG00000152291	TGOLN2	TGN38|TGN46|TGN48|TGN51|TTGN2	trans-golgi network protein 2	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr2-3019	chr2	86554328	86555328	+	16	1000	"intron (NM_001164730, intron 1 of 6)"	AluY|SINE|Alu	9949	NM_022912	65055	Hs.368884	NM_022912	ENSG00000068615	REEP1	C2orf23|HMN5B|SPG31|Yip2a	receptor accessory protein 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr2-302	chr2	241648680	241649680	+	23	1000	Intergenic	MER68|LTR|ERVL	17918	NM_198998	375318	Hs.534650	NM_198998	ENSG00000184945	AQP12A	AQP-12|AQP12|AQPX2	aquaporin 12A	protein-coding	23.04	0.97	23.75257732	5.03E-19
chr2-3022	chr2	88739914	88740914	+	15.4	1000	Intergenic	FLAM_C|SINE|Alu	11639	NM_001135649	344167	Hs.716722	NM_001135649	ENSG00000214336	FOXI3	-	forkhead box I3	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr2-3037	chr2	95689181	95694392	+	92.2	5211	"intron (NM_022440, intron 1 of 1)"	CpG	386	NM_022438	4118	Hs.80395	NM_002371	ENSG00000172005	MAL	-	"mal, T-cell differentiation protein"	protein-coding	92.17	13.59	6.782192789	3.47E-35
chr2-3042	chr2	97588125	97589125	+	15.4	1000	"intron (NM_001122646, intron 10 of 16)"	AluSq2|SINE|Alu	3782	NR_110209	101927053	Hs.677537	NR_110209		LOC101927053	-	uncharacterized LOC101927053	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr2-3046	chr2	97660439	97662680	+	42.9	2241	Intergenic	MIRc|SINE|MIR	-9258	NM_001122646	51252	Hs.107922	NM_016490	ENSG00000168754	FAM178B	-	family with sequence similarity 178 member B	protein-coding	42.89	10.19	4.209028459	2.83E-11
chr2-3047	chr2	98656251	98657251	+	14.7	1000	Intergenic	Intergenic	-44397	NM_015348	23505	Hs.469376	NM_015348	ENSG00000075568	TMEM131	CC28|PRO1048|RW1|YR-23	transmembrane protein 131	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-3049	chr2	100115790	100116790	+	16	1000	Intergenic	HERVIP10FH-int|LTR|ERV1	-9772	NR_135650	51455	Hs.443077	NM_016316	ENSG00000135945	REV1	AIBP80|REV1L	"REV1, DNA directed polymerase"	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-3051	chr2	101385668	101387105	+	20.5	1437	Intergenic	AluSx1|SINE|Alu	-50227	NM_002518	4862	Hs.156832	NM_002518	ENSG00000170485	NPAS2	MOP4|PASD4|bHLHe9	neuronal PAS domain protein 2	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr2-3053	chr2	101405608	101406608	+	14.7	1000	Intergenic	Intergenic	-30505	NM_002518	4862	Hs.156832	NM_002518	ENSG00000170485	NPAS2	MOP4|PASD4|bHLHe9	neuronal PAS domain protein 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr2-3055	chr2	101501152	101503272	+	36.5	2120	"intron (NM_002518, intron 1 of 20)"	AluSx|SINE|Alu	65599	NM_002518	4862	Hs.156832	NM_002518	ENSG00000170485	NPAS2	MOP4|PASD4|bHLHe9	neuronal PAS domain protein 2	protein-coding	36.48	6.8	5.364705882	3.95E-12
chr2-3057	chr2	101586320	101587320	+	19.8	1000	"intron (NM_002518, intron 11 of 20)"	"intron (NM_002518, intron 11 of 20)"	6803	NR_110213	101927142	Hs.656556	NR_110213		LOC101927142	-	uncharacterized LOC101927142	ncRNA	19.84	3.88	5.113402062	7.67E-07
chr2-3059	chr2	102596155	102597155	+	15.4	1000	Intergenic	Intergenic	-3272	NR_103791	100506328	Hs.516245	NR_103791		LINC01127	-	long intergenic non-protein coding RNA 1127	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr2-3062	chr2	102680149	102683152	+	44.2	3003	Intergenic	Intergenic	-5186	NM_001288706	3554	Hs.701982	NM_000877	ENSG00000115594	IL1R1	CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80	interleukin 1 receptor type 1	protein-coding	44.17	7.77	5.684684685	3.96E-15
chr2-3063	chr2	102736362	102738505	+	32	2143	"intron (NM_001320980, intron 1 of 11)"	"intron (NM_001320980, intron 1 of 11)"	16399	NM_001320986	3554	Hs.701982	NM_000877	ENSG00000115594	IL1R1	CD121A|D2S1473|IL-1R-alpha|IL1R|IL1RA|P80	interleukin 1 receptor type 1	protein-coding	32	1.94	16.49484536	5.00E-22
chr2-3067	chr2	102972166	102973663	+	24.3	1497	"intron (NM_001282399, intron 1 of 10)"	"intron (NM_001282399, intron 1 of 10)"	171	NM_003855	8809	Hs.469521	NM_003855	ENSG00000115604	IL18R1	CD218a|CDw218a|IL-1Rrp|IL18RA|IL1RRP	interleukin 18 receptor 1	protein-coding	24.32	2.91	8.357388316	5.77E-12
chr2-3070	chr2	105362437	105363437	+	15.4	1000	TTS (NR_038231)	TTS (NR_038231)	11240	NR_038231	284998	Hs.410180	NR_038231	ENSG00000234177	LINC01114	PANCAT	long intergenic non-protein coding RNA 1114	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr2-3071	chr2	105469469	105470469	+	15.4	1000	promoter-TSS (NR_131233)	promoter-TSS (NR_131233)	-328	NR_131233	100506421	Hs.437281	NR_037883	ENSG00000233639	LINC01158	PANTR1|linc-Brn1a|linc-POU3F3	long intergenic non-protein coding RNA 1158	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr2-3073	chr2	105536191	105537191	+	15.4	1000	Intergenic	AluSx|SINE|Alu	-47638	NR_110373	102682016	Hs.638438	NR_110373	ENSG00000229743	LINC01159	linc-Brn1b	long intergenic non-protein coding RNA 1159	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr2-3078	chr2	106251798	106252798	+	16	1000	Intergenic	Intergenic	-25282	NR_038891	285000	Hs.737917	NR_038891		LOC285000	-	uncharacterized LOC285000	ncRNA	16	0.97	16.49484536	3.54E-11
chr2-3081	chr2	109667154	109668154	+	14.7	1000	Intergenic	Intergenic	-61826	NM_022336	10913	Hs.171971	NM_022336	ENSG00000135960	EDAR	DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1	ectodysplasin A receptor	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3082	chr2	109769077	109770077	+	16	1000	"intron (NM_001099289, intron 1 of 9)"	"intron (NM_001099289, intron 1 of 9)"	-11533	NR_036223	100422863		NR_036223	ENSG00000264934	MIR4265	-	microRNA 4265	ncRNA	16	2.91	5.498281787	4.98E-06
chr2-3086	chr2	110334674	110335674	+	15.4	1000	"intron (NM_001321505, intron 1 of 7)"	AluSx1|SINE|Alu	36060	NM_001321515	151011	Hs.469615	NM_144710	ENSG00000186522	10-Sep	-	septin 10	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr2-3093	chr2	113598661	113599661	+	15.4	1000	Intergenic	Intergenic	-4805	NM_000576	3553	Hs.126256	NM_000576	ENSG00000125538	IL1B	IL-1|IL1-BETA|IL1F2	interleukin 1 beta	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr2-3095	chr2	114036470	114038010	+	23	1540	promoter-TSS (NM_003466)	promoter-TSS (NM_003466)	-742	NM_003466	7849	Hs.469728	NM_003466	ENSG00000125618	PAX8	-	paired box 8	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr2-3097	chr2	114046994	114047994	+	15.4	1000	Intergenic	Intergenic	-10996	NM_003466	7849	Hs.469728	NM_003466	ENSG00000125618	PAX8	-	paired box 8	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr2-3098	chr2	114049506	114050506	+	13.4	1000	Intergenic	L2b|LINE|L2	-13508	NM_003466	7849	Hs.469728	NM_003466	ENSG00000125618	PAX8	-	paired box 8	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr2-3100	chr2	114100593	114103756	+	42.9	3163	Intergenic	L2b|LINE|L2	-65676	NM_003466	7849	Hs.469728	NM_003466	ENSG00000125618	PAX8	-	paired box 8	protein-coding	42.89	8.74	4.907322654	5.23E-13
chr2-3103	chr2	120186626	120187886	+	16	1260	Intergenic	Intergenic	-2190	NM_183240	140738	Hs.26216	NM_183240	ENSG00000171227	TMEM37	PR|PR1	transmembrane protein 37	protein-coding	16	2.43	6.58436214	7.90E-07
chr2-3104	chr2	120195402	120196402	+	15.4	1000	"3' UTR (NM_183240, exon 2 of 2)"	"3' UTR (NM_183240, exon 2 of 2)"	6456	NM_183240	140738	Hs.26216	NM_183240	ENSG00000171227	TMEM37	PR|PR1	transmembrane protein 37	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-3108	chr2	121325905	121326905	+	15.4	1000	Intergenic	Intergenic	-102480	NR_027181	84931	Hs.334519	NM_032845	ENSG00000280409	LINC01101	-	long intergenic non-protein coding RNA 1101	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr2-3110	chr2	121390622	121391872	+	20.5	1250	Intergenic	Intergenic	-163620	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr2-3114	chr2	121547499	121549277	+	28.2	1778	Intergenic	Intergenic	-6479	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr2-3115	chr2	121634016	121635016	+	14.7	1000	"intron (NM_005270, intron 1 of 12)"	Arthur1A|DNA|hAT-Tip100	79649	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3116	chr2	121637048	121638572	+	22.4	1524	"intron (NM_005270, intron 1 of 12)"	"intron (NM_005270, intron 1 of 12)"	82943	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding	22.4	0.97	23.09278351	1.19E-17
chr2-3118	chr2	121819253	121820828	+	25.6	1575	Intergenic	Intergenic	222738	NM_014553	29842	Hs.156471	NM_014553	ENSG00000115112	TFCP2L1	CRTR1|LBP-9|LBP9	transcription factor CP2 like 1	protein-coding	25.6	5.82	4.39862543	7.99E-08
chr2-312	chr2	30187160	30188160	+	21.8	1000	Intergenic	Intergenic	-43183	NM_004304	238	Hs.654469	NM_004304	ENSG00000171094	ALK	CD246|NBLST3	anaplastic lymphoma receptor tyrosine kinase	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr2-3120	chr2	121826162	121827162	+	16	1000	Intergenic	Intergenic	216116	NM_014553	29842	Hs.156471	NM_014553	ENSG00000115112	TFCP2L1	CRTR1|LBP-9|LBP9	transcription factor CP2 like 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-3122	chr2	122545021	122546021	+	15.4	1000	Intergenic	AluSx|SINE|Alu	32400	NR_048557	7247	Hs.75066	NM_004622	ENSG00000211460	TSN	BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN	translin	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-3130	chr2	127920165	127921165	+	16	1000	Intergenic	MER4D1|LTR|ERV1	42678	NM_001001665	339761	Hs.407639	NM_001001665	ENSG00000186684	CYP27C1	-	cytochrome P450 family 27 subfamily C member 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr2-3131	chr2	128579173	128580173	+	14.7	1000	Intergenic	HUERS-P3-int|LTR|ERV1	-10912	NM_001006623	55339	Hs.554831	NM_018383	ENSG00000136709	WDR33	NET14|WDC146	WD repeat domain 33	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-3136	chr2	130548078	130549078	+	16	1000	Intergenic	Intergenic	-132172	NR_110285	101927924	Hs.570248	NR_110285	ENSG00000237574	LINC01856	-	long intergenic non-protein coding RNA 1856	ncRNA	16	3.88	4.12371134	7.91E-05
chr2-3137	chr2	130565897	130567520	+	24.3	1623	Intergenic	L1ME4a|LINE|L1	-114042	NR_110285	101927924	Hs.570248	NR_110285	ENSG00000237574	LINC01856	-	long intergenic non-protein coding RNA 1856	ncRNA	24.32	4.37	5.565217391	4.38E-09
chr2-3139	chr2	131510084	131511084	+	15.4	1000	Intergenic	L1MB4|LINE|L1	-2493	NM_152698	205147	Hs.369289	NM_152698	ENSG00000178171	AMER3	FAM123C	APC membrane recruitment protein 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-314	chr2	38322170	38323742	+	30.1	1572	Intergenic	Intergenic	-19633	NM_000104	1545	Hs.154654	NM_000104	ENSG00000138061	CYP1B1	CP1B|CYPIB1|GLC3A|P4501B1	cytochrome P450 family 1 subfamily B member 1	protein-coding	30.08	4.85	6.202061856	2.13E-11
chr2-3144	chr2	135240131	135241131	+	14.7	1000	"intron (NM_030923, intron 5 of 7)"	"intron (NM_030923, intron 5 of 7)"	228801	NM_002410	4249	Hs.4988	NM_002410	ENSG00000152127	MGAT5	GNT-V|GNT-VA	"mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-3145	chr2	135390179	135391179	+	16	1000	"intron (NM_030923, intron 2 of 7)"	MLT1A0|LTR|ERVL-MaLR	85892	NM_030923	81615	Hs.369471	NM_030923	ENSG00000152128	TMEM163	DC29|SV31	transmembrane protein 163	protein-coding	16	2.91	5.498281787	4.98E-06
chr2-3149	chr2	135534198	135535198	+	14.7	1000	Intergenic	Intergenic	-58127	NM_030923	81615	Hs.369471	NM_030923	ENSG00000152128	TMEM163	DC29|SV31	transmembrane protein 163	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr2-3152	chr2	137174940	137175940	+	15.4	1000	Intergenic	Intergenic	-299715	NM_003467	7852	Hs.593413	NM_003467	ENSG00000121966	CXCR4	CD184|D2S201E|FB22|HM89|HSY3RR|LAP-3|LAP3|LCR1|LESTR|NPY3R|NPYR|NPYRL|NPYY3R|WHIM|WHIMS	C-X-C motif chemokine receptor 4	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-3156	chr2	145271029	145277044	+	90.3	6015	"intron (NR_033258, intron 2 of 2)"	CpG	-3145	NR_040248	100303491	Hs.560789	NR_040248	ENSG00000238057	ZEB2-AS1	ZEB2-AS|ZEB2AS|ZEB2NAT	ZEB2 antisense RNA 1	ncRNA	90.25	15.05	5.996677741	6.43E-31
chr2-3160	chr2	149805584	149806584	+	15.4	1000	"intron (NR_111932, intron 1 of 19)"	"intron (NR_111932, intron 1 of 19)"	1740	NR_111932	3800	Hs.435557	NM_004522	ENSG00000168280	KIF5C	CDCBM2|KINN|NKHC|NKHC-2|NKHC2	kinesin family member 5C	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-3162	chr2	149856573	149857573	+	16	1000	"intron (NM_004522, intron 20 of 25)"	"intron (NM_004522, intron 20 of 25)"	-37908	NM_177964	130576	Hs.357567	NM_177964	ENSG00000150556	LYPD6B	CT116|LYPD7	LY6/PLAUR domain containing 6B	protein-coding	16	1.94	8.24742268	7.67E-08
chr2-3163	chr2	150012252	150015492	+	45.4	3240	"intron (NM_001317004, intron 3 of 6)"	"intron (NM_001317004, intron 3 of 6)"	39184	NM_001317002	130576	Hs.357567	NM_177964	ENSG00000150556	LYPD6B	CT116|LYPD7	LY6/PLAUR domain containing 6B	protein-coding	45.45	11.16	4.072580645	1.73E-11
chr2-3174	chr2	171098882	171099882	+	16	1000	"intron (NM_001083615, intron 7 of 33)"	"intron (NM_001083615, intron 7 of 33)"	64727	NR_045683	140469	Hs.671900	NM_138995	ENSG00000071909	MYO3B	-	myosin IIIB	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-3175	chr2	171113068	171114068	+	14.7	1000	"intron (NM_001083615, intron 7 of 33)"	L1PA16|LINE|L1	78913	NR_045683	140469	Hs.671900	NM_138995	ENSG00000071909	MYO3B	-	myosin IIIB	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr2-3179	chr2	171259334	171260645	+	19.2	1311	"intron (NM_001083615, intron 19 of 33)"	"intron (NM_001083615, intron 19 of 33)"	-52536	NR_110576	101929753	Hs.534101	NR_110576		LOC101929753	-	uncharacterized LOC101929753	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr2-3181	chr2	171357822	171358822	+	16	1000	"exon (NM_138995, exon 28 of 35)"	"exon (NM_138995, exon 28 of 35)"	-150869	NR_110576	101929753	Hs.534101	NR_110576		LOC101929753	-	uncharacterized LOC101929753	ncRNA	16	2.91	5.498281787	4.98E-06
chr2-3184	chr2	171459038	171460321	+	19.8	1283	"intron (NM_001083615, intron 31 of 33)"	"intron (NM_001083615, intron 31 of 33)"	111398	NR_027433	440925	Hs.668461	NM_001013712	ENSG00000222033	LINC01124	-	long intergenic non-protein coding RNA 1124	ncRNA	19.84	0.49	40.48979592	2.52E-19
chr2-3187	chr2	172951683	172966708	+	281	15025	Intergenic	Intergenic	8283	NM_004405	1746	Hs.419	NM_004405	ENSG00000115844	DLX2	TES-1|TES1	distal-less homeobox 2	protein-coding	281	50.48	5.566561014	2.73E-87
chr2-3196	chr2	175575191	175580559	+	66.6	5368	Intergenic	MLT1F2|LTR|ERVL-MaLR	-30248	NM_001077269	7456	Hs.128067	NM_003387	ENSG00000115935	WIPF1	PRPL-2|WAS2|WASPIP|WIP	WAS/WASL interacting protein family member 1	protein-coding	66.57	13.59	4.898454746	8.51E-20
chr2-3198	chr2	176421764	176425480	+	46.1	3716	Intergenic	Intergenic	-377132	NM_001190329	518	Hs.429	NM_001689	ENSG00000154518	ATP5G3	P3	"ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9)"	protein-coding	46.09	10.68	4.315543071	1.21E-12
chr2-3204	chr2	176730139	176731139	+	16	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	136434	NM_001305010	80856	Hs.209561	NM_030650	ENSG00000144320	LNPK	KIAA1715|LNP|LNP1|Ul|ulnaless	"lunapark, ER junction formation factor"	protein-coding	16	3.4	4.705882353	2.25E-05
chr2-3205	chr2	176952402	176954467	+	35.8	2065	Intergenic	Intergenic	-4098	NM_000523	3239	Hs.152414	NM_000523	ENSG00000128714	HOXD13	BDE|BDSD|HOX4I|SPD|SPD1	homeobox D13	protein-coding	35.84	6.8	5.270588235	3.95E-12
chr2-3212	chr2	177037779	177038779	+	15.4	1000	TTS (NM_006898)	TTS (NM_006898)	4578	NR_110458	401022	Hs.98661	NR_033979	ENSG00000224189	HAGLR	HOXD-AS1|Mdgt	HOXD antisense growth-associated long non-coding RNA	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr2-3214	chr2	177533963	177534963	+	16	1000	Intergenic	Intergenic	31981	NR_110599	102724224	Hs.663125	NR_110599	ENSG00000224577	LINC01117	-	long intergenic non-protein coding RNA 1117	ncRNA	16	2.43	6.58436214	7.90E-07
chr2-3216	chr2	177617408	177619055	+	25.6	1647	Intergenic	MIRc|SINE|MIR	115749	NR_110599	102724224	Hs.663125	NR_110599	ENSG00000224577	LINC01117	-	long intergenic non-protein coding RNA 1117	ncRNA	25.6	3.88	6.597938144	1.00E-10
chr2-322	chr2	71922452	71923706	+	23	1254	Intergenic	Intergenic	229247	NM_001130987	8291	Hs.252180	NM_003494	ENSG00000135636	DYSF	FER1L1|LGMD2B|MMD1	dysferlin	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr2-3222	chr2	177871235	177872235	+	15.4	1000	Intergenic	Tigger1|DNA|TcMar-Tigger	-205687	NM_001330247	220988	Hs.516539	NM_194247	ENSG00000170144	HNRNPA3	2610510D13Rik|D10S102|FBRNP|HNRPA3	heterogeneous nuclear ribonucleoprotein A3	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr2-3226	chr2	178950149	178951149	+	15.4	1000	"intron (NM_001077197, intron 2 of 20)"	"intron (NM_001077197, intron 2 of 20)"	-13167	NM_016953	50940	Hs.570273	NM_016953	ENSG00000128655	PDE11A	PPNAD2	phosphodiesterase 11A	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-3230	chr2	183903919	183904919	+	15.4	1000	promoter-TSS (NM_013436)	promoter-TSS (NM_013436)	-833	NM_013436	10787	Hs.603732	NM_013436	ENSG00000061676	NCKAP1	HEM2|NAP1|NAP125|p125Nap1	NCK associated protein 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr2-3231	chr2	192592224	192593224	+	15.4	1000	Intergenic	MER39|LTR|ERV1	37817	NR_131917	105747689	Hs.104972	NR_131917		LOC105747689	-	uncharacterized LOC105747689	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr2-3244	chr2	202889798	202890798	+	15.4	1000	Intergenic	MLT1J|LTR|ERVL-MaLR	-9012	NM_003507	8324	Hs.173859	NM_003507	ENSG00000155760	FZD7	FzE3	frizzled class receptor 7	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-3245	chr2	202973435	202974435	+	16	1000	"intron (NM_001277372, intron 9 of 23)"	"intron (NM_001277372, intron 9 of 23)"	7846	NR_135243	729224	Hs.623895	NR_135243		LOC729224	-	uncharacterized LOC729224	ncRNA	16	1.46	10.95890411	3.44E-09
chr2-3246	chr2	203013206	203014206	+	15.4	1000	"intron (NM_001277372, intron 13 of 23)"	"intron (NM_001277372, intron 13 of 23)"	-31925	NR_135244	729224	Hs.623895	NR_135243		LOC729224	-	uncharacterized LOC729224	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr2-3248	chr2	205154487	205155487	+	15.4	1000	Intergenic	L2b|LINE|L2	-255529	NM_152526	117583	Hs.657382	NM_057177	ENSG00000116117	PARD3B	ALS2CR19|PAR3B|PAR3L|PAR3beta	par-3 family cell polarity regulator beta	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-3249	chr2	205408233	205410874	+	44.8	2641	promoter-TSS (NM_001302769)	promoter-TSS (NM_001302769)	-963	NM_152526	117583	Hs.657382	NM_057177	ENSG00000116117	PARD3B	ALS2CR19|PAR3B|PAR3L|PAR3beta	par-3 family cell polarity regulator beta	protein-coding	44.81	5.82	7.699312715	1.25E-19
chr2-3254	chr2	206670842	206671842	+	15.4	1000	Intergenic	Intergenic	124118	NM_201264	8828	Hs.471200	NM_003872	ENSG00000118257	NRP2	NP2|NPN2|PRO2714|VEGF165R2	neuropilin 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-3256	chr2	207919575	207920575	+	15.4	1000	Intergenic	Intergenic	54722	NR_036227	100423036		NR_036227	ENSG00000253008	MIR2355	mir-2355	microRNA 2355	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr2-3257	chr2	208030822	208031822	+	15.4	1000	promoter-TSS (NR_073108)	promoter-TSS (NR_073108)	198	NR_106999	102465835		NR_106999	ENSG00000277590	MIR7845	hsa-mir-7845	microRNA 7845	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr2-3259	chr2	210761202	210762471	+	16	1269	"intron (NM_032504, intron 27 of 63)"	"intron (NM_032504, intron 27 of 63)"	-105453	NM_001318927	6120	Hs.282260	NM_006916	ENSG00000197713	RPE	RPE2-1	ribulose-5-phosphate-3-epimerase	protein-coding	16	1.94	8.24742268	7.67E-08
chr2-326	chr2	75791991	75793548	+	27.5	1557	"intron (NM_032181, intron 1 of 3)"	"intron (NM_032181, intron 1 of 3)"	4079	NM_032181	84141	Hs.302346	NM_032181	ENSG00000115363	EVA1A	FAM176A|TMEM166	"eva-1 homolog A, regulator of programmed cell death"	protein-coding	27.52	2.91	9.457044674	7.03E-14
chr2-3261	chr2	215993906	215994906	+	14.1	1000	"intron (NR_103740, intron 1 of 54)"	L1PA15-16|LINE|L1	8745	NM_173076	26154	Hs.134585	NM_015657	ENSG00000144452	ABCA12	ARCI4A|ARCI4B|ICR2B|LI2	ATP binding cassette subfamily A member 12	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr2-3263	chr2	216479704	216480704	+	14.1	1000	"non-coding (NR_037195, exon 9 of 10)"	"non-coding (NR_037195, exon 9 of 10)"	-102562	NR_132383	105373869	Hs.152812	NR_132383		LINC01614	LCAL4	long intergenic non-protein coding RNA 1614	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr2-3265	chr2	216606259	216607259	+	16	1000	"intron (NR_037195, intron 4 of 9)"	"intron (NR_037195, intron 4 of 9)"	23993	NR_132383	105373869	Hs.152812	NR_132383		LINC01614	LCAL4	long intergenic non-protein coding RNA 1614	ncRNA	16	3.88	4.12371134	7.91E-05
chr2-3267	chr2	217620812	217622101	+	21.1	1289	Intergenic	Intergenic	-61184	NM_000599	3488	Hs.607212	NM_000599	ENSG00000115461	IGFBP5	IBP5	insulin like growth factor binding protein 5	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr2-3268	chr2	217628391	217629391	+	14.7	1000	Intergenic	Intergenic	-68619	NM_000599	3488	Hs.607212	NM_000599	ENSG00000115461	IGFBP5	IBP5	insulin like growth factor binding protein 5	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr2-3273	chr2	218113971	218115244	+	19.2	1273	Intergenic	Intergenic	-32849	NR_133642	105373877		NR_133642		DIRC3-AS1	-	DIRC3 antisense RNA 1	ncRNA	19.2	3.4	5.647058824	1.47E-07
chr2-3275	chr2	218768940	218770471	+	23.7	1531	"intron (NM_001308023, intron 3 of 29)"	MIRb|SINE|MIR	-4354	NR_106867	102465485		NR_106867	ENSG00000275458	MIR6809	hsa-mir-6809	microRNA 6809	ncRNA	23.68	2.91	8.137457045	4.85E-11
chr2-329	chr2	89887538	89890798	+	67.2	3260	Intergenic	Intergenic	777284	NR_039635	100616399		NR_039635	ENSG00000265510	MIR4436A	mir-4436a	microRNA 4436a	ncRNA	67.21	14.56	4.616071429	1.47E-18
chr2-3290	chr2	220346958	220348293	+	21.8	1335	"intron (NM_005876, intron 29 of 40)"	"intron (NM_005876, intron 29 of 40)"	-13452	NM_001286811	100996693	Hs.21639	NM_001286811	ENSG00000072195	LOC100996693	-	CAVP-target protein-like	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr2-3292	chr2	220396283	220398326	+	33.9	2043	"intron (NM_182847, intron 4 of 8)"	"intron (NM_182847, intron 4 of 8)"	10515	NM_001195731	79586	Hs.516711	NM_024536	ENSG00000123989	CHPF	CHSY2|CSS2	chondroitin polymerizing factor	protein-coding	33.92	3.4	9.976470588	2.03E-17
chr2-3294	chr2	220867659	220868659	+	15.4	1000	Intergenic	MIR3|SINE|MIR	-96873	NR_036228	100422959		NR_036228	ENSG00000266518	MIR4268	-	microRNA 4268	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr2-3299	chr2	223145541	223146541	+	14.7	1000	"intron (NM_181457, intron 4 of 7)"	"intron (NM_181457, intron 4 of 7)"	-16825	NM_153038	151278	Hs.350729	NM_153038	ENSG00000163081	CCDC140	-	coiled-coil domain containing 140	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3304	chr2	225087054	225088054	+	14.7	1000	Intergenic	Intergenic	179157	NM_024785	79843	Hs.147585	NM_024785	ENSG00000124019	FAM124B	-	family with sequence similarity 124 member B	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-3306	chr2	225186843	225187843	+	15.4	1000	Intergenic	L2b|LINE|L2	79368	NM_024785	79843	Hs.147585	NM_024785	ENSG00000124019	FAM124B	-	family with sequence similarity 124 member B	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr2-3308	chr2	227919739	227920739	+	14.7	1000	"intron (NM_000092, intron 30 of 47)"	AluJr|SINE|Alu	109036	NM_000092	1286	Hs.591645	NM_000092	ENSG00000081052	COL4A4	CA44	collagen type IV alpha 4 chain	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr2-3310	chr2	228078553	228079553	+	14.7	1000	"intron (NM_000091, intron 1 of 51)"	"intron (NM_000091, intron 1 of 51)"	49772	NM_000091	1285	Hs.570065	NM_000091	ENSG00000169031	COL4A3	-	collagen type IV alpha 3 chain	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr2-3311	chr2	229973388	229974388	+	15.4	1000	"intron (NM_001330157, intron 1 of 1)"	"intron (NM_001330157, intron 1 of 1)"	122920	NM_001330156	55022	Hs.745038	NM_017933	ENSG00000153823	PID1	HMFN2073|NYGGF4|P-CLI1|PCLI1	phosphotyrosine interaction domain containing 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-3315	chr2	230469165	230470998	+	28.2	1833	"intron (NM_139072, intron 1 of 12)"	"intron (NM_139072, intron 1 of 12)"	109205	NM_139072	92737	Hs.234074	NM_139072	ENSG00000187957	DNER	UNQ26|bet	delta/notch like EGF repeat containing	protein-coding	28.16	3.88	7.257731959	1.97E-12
chr2-3321	chr2	232395779	232396779	+	15.4	1000	Intergenic	MER5A|DNA|hAT-Charlie	-1097	NM_006056	10316	Hs.471619	NM_006056	ENSG00000171596	NMUR1	(FM-3)|FM-3|FM3|GPC-R|GPR66|NMU1R	neuromedin U receptor 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-3329	chr2	233780046	233781655	+	27.5	1609	"intron (NM_019850, intron 5 of 14)"	"intron (NM_019850, intron 5 of 14)"	12011	NM_001114090	25791	Hs.97316	NM_019850	ENSG00000066248	NGEF	ARHGEF27|EPHEXIN	neuronal guanine nucleotide exchange factor	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr2-3332	chr2	234717374	234718765	+	20.5	1391	"intron (NM_001287395, intron 22 of 41)"	"intron (NM_001287395, intron 22 of 41)"	33744	NM_001287395	339766	Hs.361778	NM_001287395	ENSG00000185038	MROH2A	HEATR7B1	maestro heat like repeat family member 2A	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr2-3340	chr2	234910351	234911609	+	21.1	1258	"intron (NM_024080, intron 22 of 25)"	"intron (NM_024080, intron 22 of 25)"	-48366	NM_006944	6694	Hs.444488	NM_006944	ENSG00000072080	SPP2	SPP-24|SPP24	secreted phosphoprotein 2	protein-coding	21.12	0	21.75608266	5.97E-21
chr2-3343	chr2	235455778	235456778	+	13.4	1000	Intergenic	Intergenic	-50581	NM_001282431	10123	Hs.111554	NM_005737	ENSG00000188042	ARL4C	ARL7|LAK	ADP ribosylation factor like GTPase 4C	protein-coding	13.44	2.43	5.530864198	2.99E-05
chr2-3346	chr2	235498401	235499401	+	14.7	1000	Intergenic	MER90a|LTR|ERV1	-92411	NR_132376	106144537	Hs.580616	NR_132376	ENSG00000280744	LINC01173	-	long intergenic non-protein coding RNA 1173	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr2-3349	chr2	235637583	235638583	+	14.7	1000	Intergenic	L1ME3A|LINE|L1	46771	NR_132376	106144537	Hs.580616	NR_132376	ENSG00000280744	LINC01173	-	long intergenic non-protein coding RNA 1173	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr2-3351	chr2	235909874	235910874	+	15.4	1000	"intron (NM_014521, intron 2 of 5)"	"intron (NM_014521, intron 2 of 5)"	49746	NM_014521	23677	Hs.516777	NM_014521	ENSG00000130147	SH3BP4	BOG25|TTP	SH3 domain binding protein 4	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-3352	chr2	235936113	235939136	+	36.5	3023	"intron (NM_014521, intron 2 of 5)"	L2a|LINE|L2	76996	NM_014521	23677	Hs.516777	NM_014521	ENSG00000130147	SH3BP4	BOG25|TTP	SH3 domain binding protein 4	protein-coding	36.48	8.74	4.173913043	1.05E-09
chr2-3354	chr2	235971170	235972170	+	15.4	1000	Intergenic	AluSz|SINE|Alu	111042	NM_014521	23677	Hs.516777	NM_014521	ENSG00000130147	SH3BP4	BOG25|TTP	SH3 domain binding protein 4	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-3360	chr2	236540771	236541771	+	16	1000	"intron (NM_001037131, intron 1 of 17)"	"intron (NM_001037131, intron 1 of 17)"	126876	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	16	1.94	8.24742268	7.67E-08
chr2-3363	chr2	236582801	236583801	+	16	1000	"intron (NM_001037131, intron 1 of 17)"	"intron (NM_001037131, intron 1 of 17)"	168906	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	16	2.43	6.58436214	7.90E-07
chr2-3367	chr2	236832696	236834276	+	25	1580	"intron (NM_014914, intron 11 of 16)"	LTR40b|LTR|ERVL	243166	NM_001485	2637	Hs.184945	NM_001485	ENSG00000168505	GBX2	-	gastrulation brain homeobox 2	protein-coding	24.96	2.91	8.577319588	5.77E-12
chr2-3369	chr2	236922583	236924113	+	21.1	1530	"intron (NM_001037131, intron 13 of 17)"	"intron (NM_001037131, intron 13 of 17)"	153304	NM_001485	2637	Hs.184945	NM_001485	ENSG00000168505	GBX2	-	gastrulation brain homeobox 2	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr2-3370	chr2	236943277	236944277	+	16	1000	"intron (NM_001037131, intron 13 of 17)"	"intron (NM_001037131, intron 13 of 17)"	132875	NM_001485	2637	Hs.184945	NM_001485	ENSG00000168505	GBX2	-	gastrulation brain homeobox 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-3380	chr2	237809484	237810484	+	16	1000	Intergenic	L1ME3A|LINE|L1	154826	NR_135202	93463	Hs.652810	NR_135202	ENSG00000124835	LOC93463	-	uncharacterized LOC93463	ncRNA	16	2.91	5.498281787	4.98E-06
chr2-3382	chr2	238176752	238177752	+	16	1000	Intergenic	MIR|SINE|MIR	145598	NM_057167	1293	Hs.233240	NM_004369	ENSG00000163359	COL6A3	BTHLM1|DYT27|UCMD1	collagen type VI alpha 3 chain	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-3386	chr2	238269383	238270672	+	21.1	1289	"intron (NM_057167, intron 14 of 42)"	"intron (NM_057167, intron 14 of 42)"	52823	NM_057167	1293	Hs.233240	NM_004369	ENSG00000163359	COL6A3	BTHLM1|DYT27|UCMD1	collagen type VI alpha 3 chain	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr2-3389	chr2	238385622	238386622	+	15.4	1000	Intergenic	ERV3-16A3_I-int|LTR|ERVL	-8931	NM_001281474	79083	Hs.102406	NM_024101	ENSG00000115648	MLPH	SLAC2-A	melanophilin	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-3390	chr2	238419274	238420274	+	16	1000	TTS (NR_106869)	TTS (NR_106869)	200	NR_106869	102465486		NR_106869	ENSG00000277842	MIR6811	hsa-mir-6811	microRNA 6811	ncRNA	16	3.88	4.12371134	7.91E-05
chr2-3391	chr2	239028490	239029490	+	15.4	1000	"intron (NM_194312, intron 5 of 8)"	"intron (NM_194312, intron 5 of 8)"	-7041	NM_001308370	339768	Hs.127724	NM_194312	ENSG00000144488	ESPNL	-	espin-like	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-3392	chr2	239202710	239203710	+	16	1000	Intergenic	MIRb|SINE|MIR	-6003	NM_022817	8864	Hs.58756	NM_003894	ENSG00000132326	PER2	FASPS|FASPS1	period circadian clock 2	protein-coding	16	2.43	6.58436214	7.90E-07
chr2-3396	chr2	239613077	239614077	+	15.4	1000	Intergenic	HERV16-int|LTR|ERVL	-143096	NM_057179	117581	Hs.422585	NM_057179	ENSG00000233608	TWIST2	AMS|BBRSAY|DERMO1|FFDD3|SETLSS|bHLHa39	twist family bHLH transcription factor 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-3399	chr2	241037495	241038495	+	16	1000	Intergenic	L1PB3|LINE|L1	37752	NM_001163424	150678	Hs.293884	NM_138336	ENSG00000172428	COPS9	CSNAP|MYEOV2	COP9 signalosome subunit 9	protein-coding	16	3.88	4.12371134	7.91E-05
chr2-340	chr2	96010400	96011907	+	31.4	1507	"intron (NM_013434, intron 2 of 8)"	CpG	-1615	NM_001034914	30818	Hs.437376	NM_013434	ENSG00000115041	KCNIP3	CSEN|DREAM|KCHIP3	potassium voltage-gated channel interacting protein 3	protein-coding	31.36	7.77	4.036036036	3.04E-08
chr2-3404	chr2	241123022	241124634	+	28.2	1612	Intergenic	Intergenic	-43755	NM_148961	150677	Hs.148586	NM_148961	ENSG00000178602	OTOS	OTOSP	otospiralin	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr2-3405	chr2	241127510	241130810	+	58.9	3300	Intergenic	Intergenic	-49087	NM_148961	150677	Hs.148586	NM_148961	ENSG00000178602	OTOS	OTOSP	otospiralin	protein-coding	58.89	8.74	6.73798627	5.39E-23
chr2-3406	chr2	241207877	241208877	+	16.6	1000	Intergenic	L1PA16|LINE|L1	-128304	NM_148961	150677	Hs.148586	NM_148961	ENSG00000178602	OTOS	OTOSP	otospiralin	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr2-3408	chr2	241394218	241395218	+	14.7	1000	promoter-TSS (NR_029702)	promoter-TSS (NR_029702)	-700	NR_029702	406941		NR_029702	ENSG00000207611	MIR149	MIRN149|mir-149	microRNA 149	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr2-3417	chr2	242473973	242474973	+	14.7	1000	Intergenic	Intergenic	-23673	NM_032515	666	Hs.293753	NM_032515	ENSG00000176720	BOK	BCL2L9|BOKL	"BOK, BCL2 family apoptosis regulator"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-3422	chr2	366784	368063	+	17.3	1279	Intergenic	Intergenic	-79115	NM_001002919	285016	Hs.355207	NM_001002919	ENSG00000189292	FAM150B	AUGA|PRO1097|RGPG542	family with sequence similarity 150 member B	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr2-3424	chr2	465619	466619	+	14.1	1000	Intergenic	Intergenic	-92082	NR_136168	105373352		NR_136168		LOC105373352	-	uncharacterized LOC105373352	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr2-3426	chr2	587452	588452	+	19.2	1000	Intergenic	Intergenic	29751	NR_136169	105373352		NR_136168		LOC105373352	-	uncharacterized LOC105373352	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr2-3432	chr2	1286642	1287642	+	15.4	1000	"intron (NM_018968, intron 14 of 16)"	"intron (NM_018968, intron 14 of 16)"	-130091	NM_001206744	7173	Hs.467554	NM_000547	ENSG00000115705	TPO	MSA|TDH2A|TPX	thyroid peroxidase	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-3435	chr2	1562877	1563877	+	15.4	1000	Intergenic	MIR|SINE|MIR	145197	NM_175721	7173	Hs.467554	NM_000547	ENSG00000115705	TPO	MSA|TDH2A|TPX	thyroid peroxidase	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-3436	chr2	1586219	1587469	+	21.1	1250	Intergenic	Intergenic	161475	NM_012293	7837	Hs.332197	NM_012293	ENSG00000130508	PXDN	COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO	peroxidasin	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr2-3437	chr2	1847909	1852322	+	65.9	4413	"intron (NM_001329845, intron 19 of 24)"	"intron (NM_001329845, intron 19 of 24)"	-101796	NM_012293	7837	Hs.332197	NM_012293	ENSG00000130508	PXDN	COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO	peroxidasin	protein-coding	65.93	9.71	6.789907312	2.86E-25
chr2-3443	chr2	1917718	1918718	+	13.4	1000	"intron (NM_001329845, intron 11 of 24)"	"intron (NM_001329845, intron 11 of 24)"	-169899	NM_012293	7837	Hs.332197	NM_012293	ENSG00000130508	PXDN	COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO	peroxidasin	protein-coding	13.44	2.43	5.530864198	2.99E-05
chr2-3445	chr2	1981987	1982987	+	14.7	1000	"intron (NM_001329845, intron 8 of 24)"	"intron (NM_001329845, intron 8 of 24)"	-234168	NM_012293	7837	Hs.332197	NM_012293	ENSG00000130508	PXDN	COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO	peroxidasin	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-3448	chr2	2109438	2110438	+	14.1	1000	"intron (NM_001329845, intron 3 of 24)"	"intron (NM_001329845, intron 3 of 24)"	-213066	NR_024468	730811	Hs.629472	NR_024468	ENSG00000225619	MYT1L-AS1	-	MYT1L antisense RNA 1	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr2-3453	chr2	2686568	2687568	+	15.4	1000	Intergenic	Intergenic	-351983	NM_015025	23040	Hs.434418	NM_015025	ENSG00000186487	MYT1L	MRD39|NZF1|ZC2H2C2|ZC2HC4B|myT1-L	myelin transcription factor 1 like	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-3456	chr2	3683600	3684600	+	14.7	1000	"intron (NM_199235, intron 4 of 7)"	"intron (NM_199235, intron 4 of 7)"	-21686	NM_018436	55821	Hs.97899	NM_018436	ENSG00000151360	ALLC	ALC	allantoicase	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3457	chr2	3791422	3792422	+	14.7	1000	"intron (NM_001287444, intron 4 of 10)"	"intron (NM_001287444, intron 4 of 10)"	40740	NM_001287444	728597	Hs.304233	NM_001287444	ENSG00000214866	DCDC2C	-	doublecortin domain containing 2C	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr2-3461	chr2	6163508	6164508	+	14.7	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	41898	NR_026833	400940	Hs.378814	NM_207479		LOC400940	-	uncharacterized LOC400940	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr2-3462	chr2	6551018	6552018	+	15.4	1000	Intergenic	AluSq|SINE|Alu	-35964	NR_110251	101929390	Hs.434407	NR_110251	ENSG00000227007	LINC01247	-	long intergenic non-protein coding RNA 1247	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr2-3468	chr2	7379636	7380636	+	14.1	1000	Intergenic	Intergenic	-162125	NR_110252	101929452		NR_110252	ENSG00000223884	LOC101929452	-	uncharacterized LOC101929452	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr2-3470	chr2	7563533	7565298	+	29.4	1765	"intron (NR_038432, intron 1 of 5)"	"intron (NR_038432, intron 1 of 5)"	3023	NR_038432	100506274	Hs.177930	NR_038432	ENSG00000229727	LOC100506274	-	uncharacterized LOC100506274	ncRNA	29.44	3.88	7.587628866	2.58E-13
chr2-3471	chr2	7612423	7613423	+	13.4	1000	Intergenic	Intergenic	51531	NR_038432	100506274	Hs.177930	NR_038432	ENSG00000229727	LOC100506274	-	uncharacterized LOC100506274	ncRNA	13.44	0	13.84477987	1.16E-11
chr2-3472	chr2	8040056	8041056	+	14.7	1000	promoter-TSS (NR_110256)	promoter-TSS (NR_110256)	-770	NR_110256	101929551	Hs.116006	NR_110256	ENSG00000226506	LOC101929551	-	uncharacterized LOC101929551	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr2-3473	chr2	8520559	8521559	+	15.4	1000	Intergenic	MER57C2|LTR|ERV1	-52510	NR_034135	339789	Hs.565619	NM_207358	ENSG00000236790	LINC00299	C2orf46|NCRNA00299	long intergenic non-protein coding RNA 299	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr2-348	chr2	177686333	177689686	+	49.9	3353	Intergenic	Intergenic	185527	NR_110599	102724224	Hs.663125	NR_110599	ENSG00000224577	LINC01117	-	long intergenic non-protein coding RNA 1117	ncRNA	49.93	7.28	6.858516484	5.35E-20
chr2-3480	chr2	9386777	9387777	+	14.7	1000	"intron (NM_001135191, intron 1 of 26)"	"intron (NM_001135191, intron 1 of 26)"	40383	NM_003887	8853	Hs.555902	NM_003887	ENSG00000151693	ASAP2	AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 2"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3482	chr2	9437870	9438870	+	14.7	1000	"intron (NM_001135191, intron 3 of 26)"	"intron (NM_001135191, intron 3 of 26)"	91476	NM_003887	8853	Hs.555902	NM_003887	ENSG00000151693	ASAP2	AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 2"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3483	chr2	9516930	9518206	+	20.5	1276	"intron (NM_001135191, intron 18 of 26)"	"intron (NM_001135191, intron 18 of 26)"	45221	NR_134951	9270	Hs.467662	NM_004763	ENSG00000119185	ITGB1BP1	ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B	integrin subunit beta 1 binding protein 1	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr2-3485	chr2	9832736	9836844	+	48.6	4108	Intergenic	Intergenic	-63606	NM_006826	10971	Hs.74405	NM_006826	ENSG00000134308	YWHAQ	14-3-3|1C5|HS1	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta	protein-coding	48.65	9.22	5.276572668	6.74E-16
chr2-3488	chr2	9914113	9915113	+	14.1	1000	Intergenic	Intergenic	-68958	NM_001318977	9014	Hs.584833	NM_005680	ENSG00000115750	TAF1B	MGC:9349|RAF1B|RAFI63|SL1|TAFI63	"TATA-box binding protein associated factor, RNA polymerase I subunit B"	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr2-3489	chr2	9932429	9933429	+	14.1	1000	Intergenic	Intergenic	-50642	NM_001318977	9014	Hs.584833	NM_005680	ENSG00000115750	TAF1B	MGC:9349|RAF1B|RAFI63|SL1|TAFI63	"TATA-box binding protein associated factor, RNA polymerase I subunit B"	protein-coding	14.08	0	14.5040551	3.99E-13
chr2-3491	chr2	9976428	9977428	+	14.7	1000	Intergenic	Intergenic	-6643	NM_001318977	9014	Hs.584833	NM_005680	ENSG00000115750	TAF1B	MGC:9349|RAF1B|RAFI63|SL1|TAFI63	"TATA-box binding protein associated factor, RNA polymerase I subunit B"	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr2-3492	chr2	10161936	10164635	+	34.6	2699	Intergenic	Intergenic	20243	NR_135558	101929882	Hs.405158	NR_135558		LOC101929882	-	uncharacterized LOC101929882	ncRNA	34.56	5.34	6.471910112	9.27E-14
chr2-3504	chr2	10665593	10666865	+	16.6	1272	Intergenic	Intergenic	76375	NR_110597	101929715	Hs.634550	NR_110597		LOC101929715	-	uncharacterized LOC101929715	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr2-3507	chr2	10956432	10957874	+	20.5	1442	"intron (NM_001282705, intron 2 of 13)"	"intron (NM_001282705, intron 2 of 13)"	-4188	NM_001282707	10130	Hs.212102	NM_005742	ENSG00000143870	PDIA6	ERP5|P5|TXNDC7	protein disulfide isomerase family A member 6	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr2-3511	chr2	11109908	11110908	+	14.1	1000	Intergenic	L2a|LINE|L2	58345	NM_002236	3754	Hs.23735	NM_002236	ENSG00000162975	KCNF1	IK8|KCNF|KV5.1|kH1	potassium voltage-gated channel modifier subfamily F member 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr2-3515	chr2	11534069	11535948	+	26.9	1879	"intron (NR_047499, intron 1 of 2)"	Arthur1B|DNA|hAT-Tip100	901	NR_047499	100874055	Hs.102428	NR_047499	ENSG00000224177	LINC00570	ncRNA-a5	long intergenic non-protein coding RNA 570	ncRNA	26.88	0.97	27.71134021	2.75E-23
chr2-3517	chr2	14433233	14434233	+	14.7	1000	"intron (NR_103814, intron 2 of 3)"	"intron (NR_103814, intron 2 of 3)"	107349	NR_103814	100499171	Hs.565606	NR_103814	ENSG00000230448	LINC00276	NCRNA00276	long intergenic non-protein coding RNA 276	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr2-3519	chr2	15844228	15845228	+	14.7	1000	"intron (NR_110201, intron 4 of 5)"	"intron (NR_110201, intron 4 of 5)"	13822	NR_110201	101926966	Hs.502835	NR_110201	ENSG00000231031	LINC01804	-	long intergenic non-protein coding RNA 1804	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr2-3524	chr2	15892543	15893543	+	16.6	1000	Intergenic	Intergenic	62137	NR_110201	101926966	Hs.502835	NR_110201	ENSG00000231031	LINC01804	-	long intergenic non-protein coding RNA 1804	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr2-353	chr2	220280124	220281678	+	23	1554	Intergenic	Intergenic	-2198	NM_001927	1674	Hs.594952	NM_001927	ENSG00000175084	DES	CSM1|CSM2|LGMD2R	desmin	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr2-3530	chr2	16389817	16390817	+	14.7	1000	Intergenic	Intergenic	199768	NR_126559	104797537	Hs.435748	NR_126559	ENSG00000236289	GACAT3	LINC01458|lncRNA-AC130710	gastric cancer associated transcript 3 (non-protein coding)	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr2-3533	chr2	16815357	16818515	+	41	3158	"intron (NM_030797, intron 1 of 11)"	"intron (NM_030797, intron 1 of 11)"	30198	NM_030797	81553	Hs.467769	NM_030797	ENSG00000197872	FAM49A	-	family with sequence similarity 49 member A	protein-coding	40.97	6.8	6.025	3.54E-15
chr2-3536	chr2	19769569	19770569	+	15.4	1000	Intergenic	AluSc|SINE|Alu	-211697	NM_145260	130497	Hs.123933	NM_145260	ENSG00000143867	OSR1	ODD	odd-skipped related transciption factor 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-3542	chr2	20265668	20266668	+	14.1	1000	Intergenic	Intergenic	-14379	NM_014713	9741	Hs.467807	NM_014713	ENSG00000068697	LAPTM4A	HUMORF13|LAPTM4|MBNT|Mtrp	lysosomal protein transmembrane 4 alpha	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr2-3543	chr2	20276144	20277814	+	21.1	1670	Intergenic	Intergenic	-25190	NM_014713	9741	Hs.467807	NM_014713	ENSG00000068697	LAPTM4A	HUMORF13|LAPTM4|MBNT|Mtrp	lysosomal protein transmembrane 4 alpha	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr2-3545	chr2	20380843	20381843	+	14.7	1000	Intergenic	AluSz6|SINE|Alu	43584	NM_002997	6382	Hs.224607	NM_002997	ENSG00000115884	SDC1	CD138|SDC|SYND1|syndecan	syndecan 1	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr2-3551	chr2	20432238	20433238	+	14.7	1000	Intergenic	Intergenic	-7544	NM_001006946	6382	Hs.224607	NM_002997	ENSG00000115884	SDC1	CD138|SDC|SYND1|syndecan	syndecan 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3554	chr2	20705781	20706781	+	15.4	1000	Intergenic	Intergenic	59449	NM_004040	388	Hs.502876	NM_004040	ENSG00000143878	RHOB	ARH6|ARHB|MST081|MSTP081|RHOH6	ras homolog family member B	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-3559	chr2	20770283	20771283	+	15.4	1000	Intergenic	Intergenic	21525	NR_046836	100874343	Hs.591546	NR_046836	ENSG00000231948	HS1BP3-IT1	-	HS1BP3 intronic transcript 1	ncRNA	15.36	0	15.82260557	1.26E-14
chr2-356	chr2	234914721	234916057	+	26.2	1336	"intron (NM_024080, intron 22 of 25)"	"intron (NM_024080, intron 22 of 25)"	-43957	NM_006944	6694	Hs.444488	NM_006944	ENSG00000072080	SPP2	SPP-24|SPP24	secreted phosphoprotein 2	protein-coding	26.24	6.31	4.158478605	2.77E-07
chr2-3560	chr2	22898440	22899440	+	14.1	1000	Intergenic	Intergenic	139589	NR_110577	102723362	Hs.502887	NR_110577	ENSG00000233587	LINC01884	-	long intergenic non-protein coding RNA 1884	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr2-3561	chr2	23260678	23261678	+	14.7	1000	Intergenic	MLT1B|LTR|ERVL-MaLR	-347120	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-3563	chr2	23553507	23554507	+	14.7	1000	Intergenic	Intergenic	-54291	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-3565	chr2	23595813	23596813	+	14.7	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	-11985	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-3566	chr2	23689006	23690570	+	21.1	1564	"intron (NM_052920, intron 1 of 13)"	"intron (NM_052920, intron 1 of 13)"	81490	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr2-3568	chr2	23700193	23701193	+	14.7	1000	"intron (NM_052920, intron 2 of 13)"	"intron (NM_052920, intron 2 of 13)"	92395	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-3573	chr2	23778330	23779330	+	15.4	1000	"intron (NM_052920, intron 2 of 13)"	"intron (NM_052920, intron 2 of 13)"	170532	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-3574	chr2	23784888	23786162	+	17.3	1274	"intron (NM_052920, intron 3 of 13)"	"intron (NM_052920, intron 3 of 13)"	177227	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr2-3580	chr2	25269472	25270472	+	14.7	1000	"intron (NM_001319099, intron 1 of 22)"	"intron (NM_001319099, intron 1 of 22)"	4640	NM_001319099	22979	Hs.4892	NM_014971	ENSG00000084710	EFR3B	KIAA0953	EFR3 homolog B	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-3582	chr2	25389726	25392108	+	33.3	2382	"intron (NM_001035256, intron 1 of 3)"	AluSp|SINE|Alu	803	NM_000939	5443	Hs.1897	NM_000939	ENSG00000115138	POMC	ACTH|CLIP|LPH|MSH|NPP|POC	proopiomelanocortin	protein-coding	33.28	2.43	13.69547325	6.68E-21
chr2-3587	chr2	26806689	26807689	+	15.4	1000	"intron (NM_001029881, intron 4 of 6)"	"intron (NM_001029881, intron 4 of 6)"	21762	NM_001105519	339778	Hs.407083	NM_001105519	ENSG00000173557	C2orf70	-	chromosome 2 open reading frame 70	protein-coding	15.36	0	15.82260557	1.26E-14
chr2-3588	chr2	26898183	26899562	+	21.8	1379	Intergenic	Intergenic	-16709	NM_002246	3777	Hs.24040	NM_002246	ENSG00000171303	KCNK3	K2p3.1|OAT1|PPH4|TASK|TASK-1|TBAK1	potassium two pore domain channel subfamily K member 3	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr2-3589	chr2	26909885	26910885	+	14.1	1000	Intergenic	Intergenic	-5196	NM_002246	3777	Hs.24040	NM_002246	ENSG00000171303	KCNK3	K2p3.1|OAT1|PPH4|TASK|TASK-1|TBAK1	potassium two pore domain channel subfamily K member 3	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr2-3590	chr2	26912726	26913726	+	14.7	1000	Intergenic	Intergenic	-2355	NM_002246	3777	Hs.24040	NM_002246	ENSG00000171303	KCNK3	K2p3.1|OAT1|PPH4|TASK|TASK-1|TBAK1	potassium two pore domain channel subfamily K member 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3595	chr2	27147572	27148572	+	15.4	1000	"intron (NM_020134, intron 3 of 12)"	"intron (NM_020134, intron 3 of 12)"	-45167	NM_012326	22924	Hs.515860	NM_012326	ENSG00000084764	MAPRE3	EB3|EBF3|EBF3-S|RP3	microtubule associated protein RP/EB family member 3	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr2-3596	chr2	27220387	27221643	+	18.6	1256	"intron (NM_012326, intron 1 of 6)"	L3|LINE|CR1	-16607	NM_001303050	22924	Hs.515860	NM_012326	ENSG00000084764	MAPRE3	EB3|EBF3|EBF3-S|RP3	microtubule associated protein RP/EB family member 3	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr2-3598	chr2	27361015	27362360	+	19.8	1345	"intron (NM_178553, intron 2 of 2)"	"intron (NM_178553, intron 2 of 2)"	645	NM_178553	339779	Hs.136555	NM_178553	ENSG00000186143	PRR30	C2orf53	proline rich 30	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr2-3600	chr2	27511677	27512677	+	14.7	1000	"intron (NM_032546, intron 1 of 9)"	MER106A|DNA|hAT-Charlie	6880	NM_032546	57159	Hs.516036	NM_032546	ENSG00000138100	TRIM54	MURF|MURF-3|RNF30|muRF3	tripartite motif containing 54	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr2-3605	chr2	29211264	29213703	+	41	2439	"intron (NM_001321538, intron 1 of 18)"	AluJb|SINE|Alu	8319	NM_199280	165186	Hs.525977	NM_199280	ENSG00000189350	FAM179A	-	family with sequence similarity 179 member A	protein-coding	40.97	3.4	12.05	1.07E-23
chr2-3609	chr2	29534120	29536573	+	35.8	2453	"intron (NM_004304, intron 8 of 28)"	"intron (NM_004304, intron 8 of 28)"	162897	NR_136317	105374389	Hs.196534	NR_136317		LOC105374389	-	uncharacterized LOC105374389	ncRNA	35.84	5.82	6.158075601	1.09E-13
chr2-3615	chr2	29623791	29624791	+	15.4	1000	"intron (NM_004304, intron 4 of 28)"	"intron (NM_004304, intron 4 of 28)"	73952	NR_136317	105374389	Hs.196534	NR_136317		LOC105374389	-	uncharacterized LOC105374389	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr2-3625	chr2	30416707	30417707	+	14.1	1000	Intergenic	Intergenic	-37190	NM_030915	81606	Hs.567598	NM_030915	ENSG00000213626	LBH	-	limb bud and heart development	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr2-3626	chr2	30442730	30443730	+	15.4	1000	Intergenic	MIR3|SINE|MIR	-11167	NM_030915	81606	Hs.567598	NM_030915	ENSG00000213626	LBH	-	limb bud and heart development	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-3627	chr2	30912493	30913493	+	14.7	1000	Intergenic	L2b|LINE|L2	117318	NM_144575	92291	Hs.660911	NM_144575	ENSG00000162949	CAPN13	-	calpain 13	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr2-3632	chr2	33162358	33163358	+	14.1	1000	TTS (NR_027099)	TTS (NR_027099)	-9511	NM_206943	4052	Hs.619315	NM_000627	ENSG00000049323	LTBP1	-	latent transforming growth factor beta binding protein 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr2-3636	chr2	36968676	36969676	+	15.4	1000	"intron (NM_053276, intron 3 of 15)"	L3|LINE|CR1	45343	NM_001177969	5212	Hs.137415	NM_053276	ENSG00000205221	VIT	-	vitrin	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr2-3638	chr2	37572954	37573954	+	14.7	1000	"intron (NM_012413, intron 1 of 6)"	"intron (NM_012413, intron 1 of 6)"	1701	NM_012413	25797	Hs.79033	NM_012413	ENSG00000115828	QPCT	GCT|QC|sQC	glutaminyl-peptide cyclotransferase	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr2-3648	chr2	38486550	38487550	+	14.1	1000	Intergenic	MER45B|DNA|hAT-Tip100	116622	NM_001330460	64225	Hs.594950	NM_022374	ENSG00000119787	ATL2	ARL3IP2|ARL6IP2|aip-2|atlastin2	atlastin GTPase 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr2-3651	chr2	38754763	38755763	+	14.7	1000	Intergenic	Intergenic	-12381	NR_110259	101929596	Hs.537341	NR_110259		LOC101929596	-	uncharacterized LOC101929596	ncRNA	14.72	0.49	30.04081633	3.99E-13
chr2-3653	chr2	39894817	39895817	+	14.7	1000	"intron (NM_152390, intron 1 of 3)"	L3|LINE|CR1	2282	NM_152390	130733	Hs.40808	NM_152390	ENSG00000152154	TMEM178A	TMEM178	transmembrane protein 178A	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-3655	chr2	40373849	40374849	+	15.4	1000	"intron (NM_001112802, intron 6 of 7)"	"intron (NM_001112802, intron 6 of 7)"	229575	NR_038441	100128590	Hs.744988	NR_038441	ENSG00000227028	SLC8A1-AS1	-	SLC8A1 antisense RNA 1	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr2-3659	chr2	41957296	41958296	+	14.7	1000	Intergenic	Charlie15a|DNA|hAT-Charlie	-146899	NR_033996	388942	Hs.631883	NR_033996	ENSG00000214691	LINC01913	-	long intergenic non-protein coding RNA 1913	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr2-3660	chr2	42052901	42055159	+	30.1	2258	Intergenic	L2c|LINE|L2	-50665	NR_033996	388942	Hs.631883	NR_033996	ENSG00000214691	LINC01913	-	long intergenic non-protein coding RNA 1913	ncRNA	30.08	4.85	6.202061856	2.13E-11
chr2-3663	chr2	42094389	42095389	+	14.7	1000	Intergenic	Intergenic	-9806	NR_033996	388942	Hs.631883	NR_033996	ENSG00000214691	LINC01913	-	long intergenic non-protein coding RNA 1913	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr2-3667	chr2	42289550	42292380	+	41.6	2830	Intergenic	CR1_Mam|LINE|CR1	15804	NM_138370	91461	Hs.408542	NM_138370	ENSG00000162878	PKDCC	SGK493|Vlk	"protein kinase domain containing, cytoplasmic"	protein-coding	41.61	9.22	4.513015184	9.99E-12
chr2-3669	chr2	42370321	42371321	+	14.7	1000	"intron (NR_110584, intron 3 of 3)"	"intron (NR_110584, intron 3 of 3)"	-25657	NM_001145076	27436	Hs.713173	NM_019063	ENSG00000143924	EML4	C2orf2|ELP120|EMAP-4|EMAPL4|ROPP120	echinoderm microtubule associated protein like 4	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-367	chr2	25265047	25266934	+	39.7	1887	"intron (NM_001319099, intron 1 of 22)"	"intron (NM_001319099, intron 1 of 22)"	658	NM_001319099	22979	Hs.4892	NM_014971	ENSG00000084710	EFR3B	KIAA0953	EFR3 homolog B	protein-coding	39.69	1.94	20.45876289	1.13E-29
chr2-3670	chr2	43844727	43845727	+	14.7	1000	Intergenic	L2c|LINE|L2	-19212	NM_172069	130271	Hs.164162	NM_172069	ENSG00000152527	PLEKHH2	PLEKHH1L	"pleckstrin homology, MyTH4 and FERM domain containing H2"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3672	chr2	44050870	44051870	+	15.4	1000	"exon (NM_022436, exon 8 of 13)"	"exon (NM_022436, exon 8 of 13)"	14588	NM_022436	64240	Hs.132992	NM_022436	ENSG00000138075	ABCG5	STSL	ATP binding cassette subfamily G member 5	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-3677	chr2	45188533	45189533	+	14.1	1000	Intergenic	MER5A|DNA|hAT-Charlie	19996	NM_005413	6496	Hs.567336	NM_005413	ENSG00000138083	SIX3	HPE2	SIX homeobox 3	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr2-3678	chr2	45388714	45389714	+	13.4	1000	Intergenic	Intergenic	92866	NR_033831	400952	Hs.468368	NR_033831	ENSG00000205054	LINC01121	UNQ6975	long intergenic non-protein coding RNA 1121	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr2-3681	chr2	45458219	45459219	+	14.7	1000	"intron (NR_033831, intron 1 of 5)"	"intron (NR_033831, intron 1 of 5)"	23361	NR_033831	400952	Hs.468368	NR_033831	ENSG00000205054	LINC01121	UNQ6975	long intergenic non-protein coding RNA 1121	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr2-3682	chr2	45527494	45528494	+	14.7	1000	Intergenic	Intergenic	-45914	NR_033831	400952	Hs.468368	NR_033831	ENSG00000205054	LINC01121	UNQ6975	long intergenic non-protein coding RNA 1121	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr2-3684	chr2	45861950	45862950	+	15.4	1000	Intergenic	Intergenic	-16593	NM_005400	5581	Hs.580351	NM_005400	ENSG00000171132	PRKCE	PKCE|nPKC-epsilon	protein kinase C epsilon	protein-coding	15.36	0	15.82260557	1.26E-14
chr2-3685	chr2	45910444	45911444	+	14.7	1000	"intron (NM_005400, intron 1 of 14)"	"intron (NM_005400, intron 1 of 14)"	31901	NM_005400	5581	Hs.580351	NM_005400	ENSG00000171132	PRKCE	PKCE|nPKC-epsilon	protein kinase C epsilon	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-3686	chr2	46116722	46117722	+	14.7	1000	"intron (NM_005400, intron 2 of 14)"	"intron (NM_005400, intron 2 of 14)"	238179	NM_005400	5581	Hs.580351	NM_005400	ENSG00000171132	PRKCE	PKCE|nPKC-epsilon	protein kinase C epsilon	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr2-3687	chr2	46188383	46190146	+	29.4	1763	"intron (NM_005400, intron 2 of 14)"	"intron (NM_005400, intron 2 of 14)"	310221	NM_005400	5581	Hs.580351	NM_005400	ENSG00000171132	PRKCE	PKCE|nPKC-epsilon	protein kinase C epsilon	protein-coding	29.44	5.82	5.058419244	6.85E-10
chr2-3688	chr2	46195231	46200987	+	72.3	5756	"intron (NM_005400, intron 2 of 14)"	"intron (NM_005400, intron 2 of 14)"	319066	NM_005400	5581	Hs.580351	NM_005400	ENSG00000171132	PRKCE	PKCE|nPKC-epsilon	protein kinase C epsilon	protein-coding	72.33	17.47	4.140240412	8.04E-18
chr2-3691	chr2	46285960	46288972	+	42.9	3012	"intron (NM_005400, intron 10 of 14)"	"intron (NM_005400, intron 10 of 14)"	-237075	NM_001430	2034	Hs.468410	NM_001430	ENSG00000116016	EPAS1	ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73	endothelial PAS domain protein 1	protein-coding	42.89	7.77	5.51994852	2.23E-14
chr2-3694	chr2	46514866	46515866	+	15.4	1000	Intergenic	Intergenic	-9175	NM_001430	2034	Hs.468410	NM_001430	ENSG00000116016	EPAS1	ECYT4|HIF2A|HLF|MOP2|PASD2|bHLHe73	endothelial PAS domain protein 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-3701	chr2	46714642	46715642	+	14.7	1000	Intergenic	Intergenic	8438	NM_001145051	388946	Hs.733348	NM_001145051	ENSG00000187600	TMEM247	-	transmembrane protein 247	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3703	chr2	47424308	47425308	+	14.7	1000	"intron (NR_110208, intron 4 of 4)"	"intron (NR_110208, intron 4 of 4)"	-20733	NM_001305625	805	Hs.468442	NM_001743	ENSG00000143933	CALM2	CAMII|LQT15|PHKD|PHKD2|caM	calmodulin 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3704	chr2	47795884	47797720	+	28.8	1836	"intron (NM_022055, intron 1 of 1)"	"intron (NM_022055, intron 1 of 1)"	668	NM_022055	56660	Hs.591586	NM_022055	ENSG00000184261	KCNK12	K2p12.1|THIK-2|THIK2	potassium two pore domain channel subfamily K member 12	protein-coding	28.8	1.94	14.84536082	1.99E-18
chr2-3705	chr2	47925855	47926855	+	15.4	1000	Intergenic	LTR49|LTR|ERV1	-83866	NM_001281492	2956	Hs.445052	NM_000179	ENSG00000116062	MSH6	GTBP|GTMBP|HNPCC5|HSAP|p160	mutS homolog 6	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr2-3709	chr2	49139271	49140570	+	19.2	1299	Intergenic	Intergenic	-146822	NR_107011	102465854		NR_107011	ENSG00000212036	MIR548BA	hsa-mir-548ba	microRNA 548ba	ncRNA	19.2	0.97	19.79381443	5.65E-15
chr2-3710	chr2	54628279	54629279	+	14.7	1000	Intergenic	Intergenic	-54675	NM_003128	6711	Hs.503178	NM_003128	ENSG00000115306	SPTBN1	ELF|HEL102|SPTB2|betaSpII	"spectrin beta, non-erythrocytic 1"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-372	chr2	29802518	29803799	+	22.4	1281	"intron (NM_004304, intron 3 of 28)"	"intron (NM_004304, intron 3 of 28)"	-104915	NR_136317	105374389	Hs.196534	NR_136317		LOC105374389	-	uncharacterized LOC105374389	ncRNA	22.4	2.43	9.218106996	2.49E-11
chr2-3729	chr2	64627164	64628164	+	14.1	1000	Intergenic	Intergenic	-53663	NM_014181	29094	Hs.372208	NM_014181	ENSG00000119862	LGALSL	GRP|HSPC159	galectin like	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr2-3734	chr2	64680054	64681054	+	14.1	1000	promoter-TSS (NM_014181)	promoter-TSS (NM_014181)	-773	NM_014181	29094	Hs.372208	NM_014181	ENSG00000119862	LGALSL	GRP|HSPC159	galectin like	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr2-3737	chr2	64836595	64837595	+	15.4	1000	"intron (NR_034023, intron 1 of 3)"	"intron (NR_034023, intron 1 of 3)"	2649	NR_034023	339807	Hs.434736	NR_034023	ENSG00000233694	LOC339807	-	uncharacterized LOC339807	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr2-3740	chr2	65917933	65918933	+	14.7	1000	Intergenic	Intergenic	-258777	NM_181784	200734	Hs.59332	NM_181784	ENSG00000198369	SPRED2	Spred-2	sprouty related EVH1 domain containing 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr2-3746	chr2	68142452	68143452	+	14.7	1000	Intergenic	Intergenic	-90258	NR_110271	101927701	Hs.348697	NR_110271	ENSG00000237013	LINC01812	-	long intergenic non-protein coding RNA 1812	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr2-3748	chr2	68605453	68607185	+	26.9	1732	"intron (NM_002664, intron 1 of 8)"	"intron (NM_002664, intron 1 of 8)"	13997	NM_002664	5341	Hs.468840	NM_002664	ENSG00000115956	PLEK	P47	pleckstrin	protein-coding	26.88	4.85	5.542268041	7.61E-10
chr2-3749	chr2	68882503	68885733	+	49.9	3230	Intergenic	Intergenic	13398	NM_138964	10887	Hs.683430	NM_138964	ENSG00000169618	PROKR1	GPR73|GPR73a|PK-R1|PKR1|ZAQ	prokineticin receptor 1	protein-coding	49.93	7.77	6.425997426	4.59E-19
chr2-3751	chr2	70625121	70626411	+	19.2	1290	Intergenic	Intergenic	83006	NR_046798	100874273	Hs.682157	NR_046798	ENSG00000224606	TGFA-IT1	-	TGFA intronic transcript 1	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr2-3762	chr2	71121287	71125952	+	88.3	4665	Intergenic	Intergenic	-4101	NM_012476	25806	Hs.249170	NM_012476	ENSG00000116035	VAX2	DRES93	ventral anterior homeobox 2	protein-coding	88.33	13.11	6.737604882	1.24E-33
chr2-3764	chr2	71396302	71397302	+	16	1000	Intergenic	LTR16C|LTR|ERVL	39358	NM_005791	10199	Hs.656208	NM_005791	ENSG00000124383	MPHOSPH10	CT90|MPP10|MPP10P|PPP1R106	M-phase phosphoprotein 10	protein-coding	16	3.4	4.705882353	2.25E-05
chr2-3768	chr2	71919057	71920057	+	14.7	1000	Intergenic	Intergenic	225725	NM_001130987	8291	Hs.252180	NM_003494	ENSG00000135636	DYSF	FER1L1|LGMD2B|MMD1	dysferlin	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3771	chr2	72372486	72377252	+	65.9	4766	"exon (NM_001277742, exon 1 of 5)"	"exon (NM_001277742, exon 1 of 5)"	122	NM_001277742	56603	Hs.91546	NM_019885	ENSG00000003137	CYP26B1	CYP26A2|P450RAI-2|P450RAI2|RHFCA	cytochrome P450 family 26 subfamily B member 1	protein-coding	65.93	8.25	7.991515152	2.19E-28
chr2-3774	chr2	73139746	73155077	+	242	15331	"intron (NM_004097, intron 1 of 2)"	CpG-15106	2807	NM_004097	2016	Hs.516090	NM_004097	ENSG00000135638	EMX1	-	empty spiracles homeobox 1	protein-coding	241.95	35.43	6.82895851	8.04E-90
chr2-3778	chr2	73227676	73228676	+	15.4	1000	"intron (NR_138476, intron 7 of 14)"	"intron (NR_138476, intron 7 of 14)"	58146	NM_001330406	94097	Hs.368171	NM_144579	ENSG00000144040	SFXN5	BBG-TCC	sideroflexin 5	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-3784	chr2	73523195	73525139	+	28.8	1944	Intergenic	Intergenic	-3338	NM_001965	1961	Hs.3052	NM_001965	ENSG00000135625	EGR4	NGFI-C|NGFIC|PAT133	early growth response 4	protein-coding	28.8	4.37	6.590389016	1.84E-11
chr2-3790	chr2	74826882	74827882	+	14.7	1000	"intron (NM_001281295, intron 4 of 6)"	MIR|SINE|MIR	46095	NM_001318868	1796	Hs.103854	NM_001381	ENSG00000115325	DOK1	P62DOK|pp62	docking protein 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr2-3791	chr2	74954954	74955954	+	15.4	1000	Intergenic	L1MA4|LINE|L1	74099	NR_073398	10505	Hs.25887	NM_004263	ENSG00000135622	SEMA4F	M-SEMA|PRO2353|S4F|SEMAM|SEMAW|m-Sema-M	ssemaphorin 4F	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr2-3799	chr2	85316963	85317963	+	14.1	1000	Intergenic	AluSc|SINE|Alu	-43120	NM_031283	83439	Hs.516297	NM_031283	ENSG00000152284	TCF7L1	TCF-3|TCF3	transcription factor 7 like 1	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr2-3805	chr2	85978910	85982886	+	80.7	3976	promoter-TSS (NM_032827)	promoter-TSS (NM_032827)	-11	NM_032827	84913	Hs.135569	NM_032827	ENSG00000168874	ATOH8	HATH6|bHLHa21	atonal bHLH transcription factor 8	protein-coding	80.65	10.68	7.551498127	1.51E-33
chr2-3807	chr2	86010484	86014302	+	58.9	3818	"intron (NM_032827, intron 2 of 2)"	"intron (NM_032827, intron 2 of 2)"	-1593	NR_106719	102466516		NR_106719	ENSG00000278783	MIR6071	hsa-mir-6071	microRNA 6071	ncRNA	58.89	11.16	5.27688172	6.70E-19
chr2-3809	chr2	86019386	86020386	+	13.4	1000	Intergenic	MamRep564|Unknown|Unknown	-9086	NR_106719	102466516		NR_106719	ENSG00000278783	MIR6071	hsa-mir-6071	microRNA 6071	ncRNA	13.44	2.43	5.530864198	2.99E-05
chr2-3811	chr2	86131034	86132034	+	14.7	1000	Intergenic	Intergenic	15131	NR_110569	101928113	Hs.625888	NR_110569		ST3GAL5-AS1	-	ST3GAL5 antisense RNA 1 (head to head)	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr2-3815	chr2	86503314	86504314	+	15.4	1000	"intron (NM_001164731, intron 1 of 5)"	ERVL-E-int|LTR|ERVL	60963	NM_022912	65055	Hs.368884	NM_022912	ENSG00000068615	REEP1	C2orf23|HMN5B|SPG31|Yip2a	receptor accessory protein 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-3816	chr2	86518849	86519849	+	14.7	1000	"intron (NM_001164730, intron 1 of 6)"	MIRb|SINE|MIR	45428	NM_022912	65055	Hs.368884	NM_022912	ENSG00000068615	REEP1	C2orf23|HMN5B|SPG31|Yip2a	receptor accessory protein 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3817	chr2	86562590	86565830	+	57.6	3240	"intron (NM_001164730, intron 1 of 6)"	GC_rich|Low_complexity|Low_complexity	567	NM_022912	65055	Hs.368884	NM_022912	ENSG00000068615	REEP1	C2orf23|HMN5B|SPG31|Yip2a	receptor accessory protein 1	protein-coding	57.61	7.77	7.414414414	3.81E-24
chr2-3819	chr2	88516834	88517834	+	14.1	1000	Intergenic	AluSz|SINE|Alu	44676	NM_018271	55258	Hs.739080	NM_018271	ENSG00000144115	THNSL2	SOFAT|THS2|TSH2	threonine synthase like 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr2-382	chr2	66356852	66357852	+	21.1	1000	Intergenic	Intergenic	228108	NR_039938	100616464		NR_039938	ENSG00000264525	MIR4778	-	microRNA 4778	ncRNA	21.12	3.4	6.211764706	2.41E-08
chr2-3820	chr2	88678988	88679988	+	14.7	1000	Intergenic	AluSg7|SINE|Alu	72565	NM_001135649	344167	Hs.716722	NM_001135649	ENSG00000214336	FOXI3	-	forkhead box I3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-3822	chr2	88749677	88750677	+	15.4	1000	"intron (NM_001135649, intron 2 of 2)"	"intron (NM_001135649, intron 2 of 2)"	1876	NM_001135649	344167	Hs.716722	NM_001135649	ENSG00000214336	FOXI3	-	forkhead box I3	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr2-3823	chr2	88812679	88813679	+	15.4	1000	Intergenic	AluSx1|SINE|Alu	-10990	NM_152670	200523	Hs.132104	NM_152670	ENSG00000172073	TEX37	C2orf51|TSC21	testis expressed 37	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-3824	chr2	89111139	89112139	+	14.1	1000	promoter-TSS (NR_039635)	promoter-TSS (NR_039635)	-245	NR_039635	100616399		NR_039635	ENSG00000265510	MIR4436A	mir-4436a	microRNA 4436a	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr2-3832	chr2	95683388	95684388	+	12.8	1000	Intergenic	Intergenic	-7512	NM_022439	4118	Hs.80395	NM_002371	ENSG00000172005	MAL	-	"mal, T-cell differentiation protein"	protein-coding	12.8	0.97	13.19587629	8.12E-09
chr2-3834	chr2	96226880	96227880	+	15.4	1000	Intergenic	AluSx3|SINE|Alu	-30386	NM_138800	129868	Hs.232026	NM_138800	ENSG00000144015	TRIM43	TRIM43A	tripartite motif containing 43	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr2-3836	chr2	96758929	96759929	+	14.1	1000	Intergenic	Intergenic	22555	NM_000682	151	Hs.247686	NM_000682	ENSG00000274286	ADRA2B	ADRA2L1|ADRA2RL1|ADRARL1|ALPHA2BAR|FAME2|alpha-2BAR	adrenoceptor alpha 2B	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr2-3837	chr2	96763388	96764388	+	14.1	1000	Intergenic	MIR3|SINE|MIR	18096	NM_000682	151	Hs.247686	NM_000682	ENSG00000274286	ADRA2B	ADRA2L1|ADRA2RL1|ADRARL1|ALPHA2BAR|FAME2|alpha-2BAR	adrenoceptor alpha 2B	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr2-3838	chr2	97090469	97091469	+	14.1	1000	Intergenic	Intergenic	80153	NM_001285486	93082	Hs.149219	NM_001080535	ENSG00000163121	NEURL3	LINCR	neuralized E3 ubiquitin protein ligase 3	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr2-3840	chr2	97160720	97161720	+	14.7	1000	Intergenic	L1M4|LINE|L1	9902	NM_001285486	93082	Hs.149219	NM_001080535	ENSG00000163121	NEURL3	LINCR	neuralized E3 ubiquitin protein ligase 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3842	chr2	97169882	97170882	+	14.1	1000	"5' UTR (NM_001285486, exon 2 of 6)"	"5' UTR (NM_001285486, exon 2 of 6)"	740	NM_001285486	93082	Hs.149219	NM_001080535	ENSG00000163121	NEURL3	LINCR	neuralized E3 ubiquitin protein ligase 3	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr2-3850	chr2	97624897	97625897	+	14.1	1000	"intron (NM_001122646, intron 6 of 16)"	"intron (NM_001122646, intron 6 of 16)"	26904	NM_001122646	51252	Hs.107922	NM_016490	ENSG00000168754	FAM178B	-	family with sequence similarity 178 member B	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr2-3856	chr2	98825755	98826755	+	14.7	1000	"intron (NM_001345864, intron 6 of 21)"	L1MDa|LINE|L1	60297	NM_001345864	200403	Hs.269977	NM_144992	ENSG00000168658	VWA3B	SCAR22	von Willebrand factor A domain containing 3B	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3864	chr2	101102947	101103947	+	14.7	1000	Intergenic	Intergenic	16503	NM_001011717	129521	Hs.567676	NM_001011717	ENSG00000204640	NMS	-	neuromedin S	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr2-3866	chr2	101242333	101243333	+	15.4	1000	Intergenic	L2b|LINE|L2	63415	NM_024065	79031	Hs.469459	NM_024065	ENSG00000115539	PDCL3	HTPHLP|PHLP2A|PHLP3|VIAF|VIAF1	phosducin like 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-387	chr2	73389473	73390733	+	23.7	1260	Intergenic	Intergenic	-39283	NM_001134462	344022	Hs.694384	NM_001134462	ENSG00000214513	NOTO	-	notochord homeobox	protein-coding	23.68	2.43	9.744855967	2.61E-12
chr2-3872	chr2	101572428	101574123	+	25	1695	"intron (NM_002518, intron 7 of 20)"	"intron (NM_002518, intron 7 of 20)"	20348	NR_110213	101927142	Hs.656556	NR_110213		LOC101927142	-	uncharacterized LOC101927142	ncRNA	24.96	2.91	8.577319588	5.77E-12
chr2-3878	chr2	102609669	102611275	+	23.7	1606	"intron (NM_001261419, intron 1 of 6)"	"intron (NM_001261419, intron 1 of 6)"	2166	NM_001261419	7850	Hs.25333	NM_004633	ENSG00000115590	IL1R2	CD121b|CDw121b|IL-1R-2|IL-1RT-2|IL-1RT2|IL1R2c|IL1RB	interleukin 1 receptor type 2	protein-coding	23.68	5.34	4.434456929	4.49E-07
chr2-3883	chr2	102896218	102897218	+	15.4	1000	Intergenic	Intergenic	-31244	NM_001282408	9173	Hs.66	NM_003856	ENSG00000115602	IL1RL1	DER4|FIT-1|IL33R|ST2|ST2L|ST2V|T1	interleukin 1 receptor like 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-3885	chr2	105097895	105098895	+	14.1	1000	"intron (NR_015399, intron 1 of 3)"	"intron (NR_015399, intron 1 of 3)"	28572	NR_110113	101927360	Hs.650324	NR_110113	ENSG00000234781	LINC01103	-	long intergenic non-protein coding RNA 1103	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr2-3886	chr2	105278301	105279301	+	14.1	1000	Intergenic	Intergenic	95376	NR_038231	284998	Hs.410180	NR_038231	ENSG00000234177	LINC01114	PANCAT	long intergenic non-protein coding RNA 1114	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr2-389	chr2	74725380	74730680	+	83.2	5300	"intron (NM_001009812, intron 1 of 1)"	"intron (NM_001009812, intron 1 of 1)"	-1345	NM_001282430	85474	Hs.516124	NM_001009812	ENSG00000179528	LBX2	LP3727	ladybird homeobox 2	protein-coding	83.21	10.68	7.791198502	2.51E-35
chr2-3891	chr2	105475712	105476712	+	15.4	1000	Intergenic	Intergenic	5686	NM_006236	5455	Hs.248158	NM_006236	ENSG00000198914	POU3F3	BRN1|OTF8|brain-1|oct-8	POU class 3 homeobox 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-3893	chr2	105514378	105515378	+	14.1	1000	Intergenic	Intergenic	-25825	NR_110373	102682016	Hs.638438	NR_110373	ENSG00000229743	LINC01159	linc-Brn1b	long intergenic non-protein coding RNA 1159	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr2-3895	chr2	105759382	105761595	+	30.7	2213	promoter-TSS (NR_136172)	promoter-TSS (NR_136172)	-83	NR_136172	105373984	Hs.570237	NR_136172	ENSG00000226508	LINC01918	-	long intergenic non-protein coding RNA 1918	ncRNA	30.72	4.85	6.334020619	3.34E-12
chr2-3897	chr2	105763228	105764228	+	14.7	1000	Intergenic	L2c|LINE|L2	3157	NR_136172	105373984	Hs.570237	NR_136172	ENSG00000226508	LINC01918	-	long intergenic non-protein coding RNA 1918	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr2-3903	chr2	106025091	106026091	+	15.4	1000	"intron (NM_201557, intron 1 of 5)"	"intron (NM_201557, intron 1 of 5)"	-9467	NM_001318894	2274	Hs.443687	NM_001450	ENSG00000115641	FHL2	AAG11|DRAL|FHL-2|SLIM-3|SLIM3	four and a half LIM domains 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-3904	chr2	106112634	106113634	+	15.4	1000	Intergenic	Intergenic	-57904	NM_201557	2274	Hs.443687	NM_001450	ENSG00000115641	FHL2	AAG11|DRAL|FHL-2|SLIM-3|SLIM3	four and a half LIM domains 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-3905	chr2	106232655	106234851	+	30.7	2196	Intergenic	Intergenic	-6737	NR_038891	285000	Hs.737917	NR_038891		LOC285000	-	uncharacterized LOC285000	ncRNA	30.72	4.37	7.029748284	3.82E-13
chr2-3907	chr2	106239836	106242010	+	32	2174	Intergenic	MLT1D|LTR|ERVL-MaLR	-13907	NR_038891	285000	Hs.737917	NR_038891		LOC285000	-	uncharacterized LOC285000	ncRNA	32	3.88	8.24742268	3.92E-15
chr2-3908	chr2	107157308	107158308	+	14.1	1000	Intergenic	Intergenic	-73007	NM_001144013	653489	Hs.726367	NM_001144013	ENSG00000153165	RGPD3	RGP3	RANBP2-like and GRIP domain containing 3	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr2-3910	chr2	109653035	109654035	+	15.4	1000	Intergenic	AluSz|SINE|Alu	-47707	NM_022336	10913	Hs.171971	NM_022336	ENSG00000135960	EDAR	DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1	ectodysplasin A receptor	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr2-3912	chr2	109928960	109929960	+	14.7	1000	TTS (NR_036224)	TTS (NR_036224)	621	NR_036224	100423027		NR_036224	ENSG00000265965	MIR4266	-	microRNA 4266	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr2-3913	chr2	109987013	109988013	+	14.7	1000	"intron (NM_001099289, intron 2 of 9)"	"intron (NM_001099289, intron 2 of 9)"	-57432	NR_036224	100423027		NR_036224	ENSG00000265965	MIR4266	-	microRNA 4266	ncRNA	14.72	0	15.16333034	3.99E-13
chr2-3914	chr2	110099343	110100343	+	14.7	1000	"intron (NM_001099289, intron 8 of 9)"	"intron (NM_001099289, intron 8 of 9)"	-169762	NR_036224	100423027		NR_036224	ENSG00000265965	MIR4266	-	microRNA 4266	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr2-3918	chr2	110862599	110863599	+	15.4	1000	"intron (NM_005434, intron 1 of 3)"	"intron (NM_005434, intron 1 of 3)"	11044	NM_005434	7851	Hs.185055	NM_005434	ENSG00000144063	MALL	BENE	"mal, T-cell differentiation protein like"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-3919	chr2	110882344	110883344	+	14.7	1000	"intron (NM_001128179, intron 17 of 17)"	"intron (NM_001128179, intron 17 of 17)"	-8701	NM_005434	7851	Hs.185055	NM_005434	ENSG00000144063	MALL	BENE	"mal, T-cell differentiation protein like"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-3920	chr2	110902753	110903753	+	15.4	1000	"intron (NM_001128179, intron 12 of 17)"	"intron (NM_001128179, intron 12 of 17)"	-29110	NM_005434	7851	Hs.185055	NM_005434	ENSG00000144063	MALL	BENE	"mal, T-cell differentiation protein like"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-3921	chr2	111554990	111555990	+	14.7	1000	"intron (NM_001142807, intron 5 of 17)"	"intron (NM_001142807, intron 5 of 17)"	65340	NM_001142807	55289	Hs.253320	NM_018308	ENSG00000153093	ACOXL	-	acyl-CoA oxidase-like	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3923	chr2	111624319	111626502	+	32	2183	"intron (NM_001142807, intron 10 of 17)"	AluSg4|SINE|Alu	135260	NM_001142807	55289	Hs.253320	NM_018308	ENSG00000153093	ACOXL	-	acyl-CoA oxidase-like	protein-coding	32	6.31	5.071315372	1.20E-10
chr2-3934	chr2	112667269	112668269	+	14.1	1000	"intron (NM_006343, intron 1 of 18)"	AluJr|SINE|Alu	11578	NM_006343	10461	Hs.306178	NM_006343	ENSG00000153208	MERTK	MER|RP38|Tyro12|c-Eyk|c-mer	"MER proto-oncogene, tyrosine kinase"	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr2-3935	chr2	112716810	112717810	+	14.7	1000	"intron (NM_006343, intron 4 of 18)"	AluJb|SINE|Alu	61119	NM_006343	10461	Hs.306178	NM_006343	ENSG00000153208	MERTK	MER|RP38|Tyro12|c-Eyk|c-mer	"MER proto-oncogene, tyrosine kinase"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-3937	chr2	113819459	113820459	+	14.7	1000	"intron (NM_012275, intron 4 of 4)"	"intron (NM_012275, intron 4 of 4)"	3274	NM_012275	26525	Hs.516301	NM_012275	ENSG00000136695	IL36RN	FIL1|FIL1(DELTA)|FIL1D|IL-36Ra|IL1F5|IL1HY1|IL1L1|IL1RP3|IL36RA|PSORP|PSORS14	interleukin 36 receptor antagonist	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr2-3938	chr2	113882460	113883460	+	14.7	1000	"intron (NM_173843, intron 2 of 5)"	MIRb|SINE|MIR	-2178	NM_173842	3557	Hs.81134	NM_000577	ENSG00000136689	IL1RN	DIRA|ICIL-1RA|IL-1RN|IL-1ra|IL-1ra3|IL1F3|IL1RA|IRAP|MVCD4	interleukin 1 receptor antagonist	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr2-3939	chr2	114029632	114030632	+	15.4	1000	"intron (NM_013992, intron 2 of 8)"	"intron (NM_013992, intron 2 of 8)"	6366	NM_013952	7849	Hs.469728	NM_003466	ENSG00000125618	PAX8	-	paired box 8	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-394	chr2	85106860	85108723	+	44.8	1863	"intron (NM_001307978, intron 1 of 4)"	CpG	578	NM_001307978	129293	Hs.469134	NM_001080824	ENSG00000186854	TRABD2A	C2orf89|TIKI1	TraB domain containing 2A	protein-coding	44.81	5.82	7.699312715	1.25E-19
chr2-3943	chr2	118433874	118434874	+	15.4	1000	Intergenic	AluY|SINE|Alu	-137881	NM_006773	8886	Hs.744922	NM_006773	ENSG00000088205	DDX18	MrDb	DEAD-box helicase 18	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-3945	chr2	119594020	119596250	+	30.7	2230	Intergenic	Intergenic	10624	NM_001426	2019	Hs.271977	NM_001426	ENSG00000163064	EN1	-	engrailed homeobox 1	protein-coding	30.72	0.97	31.67010309	9.87E-28
chr2-3948	chr2	119934652	119935652	+	14.7	1000	Intergenic	Intergenic	-18681	NM_182528	165257	Hs.433493	NM_182528	ENSG00000144119	C1QL2	C1QTNF10|CTRP10	complement C1q like 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3953	chr2	120427460	120428460	+	14.7	1000	Intergenic	Intergenic	-8783	NM_001105198	80775	Hs.439991	NM_030577	ENSG00000144120	TMEM177	-	transmembrane protein 177	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-3960	chr2	121434539	121435539	+	14.7	1000	Intergenic	L1MC4a|LINE|L1	-119828	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr2-3962	chr2	121577936	121579252	+	24.3	1316	"intron (NM_005270, intron 1 of 12)"	"intron (NM_005270, intron 1 of 12)"	23727	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding	24.32	0.49	49.63265306	5.59E-26
chr2-3964	chr2	121628101	121629101	+	14.7	1000	"intron (NM_005270, intron 1 of 12)"	"intron (NM_005270, intron 1 of 12)"	73734	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr2-3969	chr2	121787318	121789143	+	25	1825	Intergenic	Intergenic	233363	NM_005270	2736	Hs.111867	NM_005270	ENSG00000074047	GLI2	CJS|HPE9|PHS2|THP1|THP2	GLI family zinc finger 2	protein-coding	24.96	2.43	10.27160494	2.59E-13
chr2-3978	chr2	122000847	122003062	+	33.9	2215	"intron (NM_014553, intron 6 of 14)"	"intron (NM_014553, intron 6 of 14)"	40824	NM_014553	29842	Hs.156471	NM_014553	ENSG00000115112	TFCP2L1	CRTR1|LBP-9|LBP9	transcription factor CP2 like 1	protein-coding	33.92	3.4	9.976470588	2.03E-17
chr2-3979	chr2	122607164	122608164	+	14.1	1000	Intergenic	AluSx1|SINE|Alu	94543	NR_048557	7247	Hs.75066	NM_004622	ENSG00000211460	TSN	BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN	translin	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr2-3980	chr2	122709685	122710685	+	15.4	1000	Intergenic	MIRb|SINE|MIR	197064	NR_048557	7247	Hs.75066	NM_004622	ENSG00000211460	TSN	BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN	translin	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-3981	chr2	122790464	122791464	+	14.7	1000	Intergenic	Intergenic	277843	NR_048557	7247	Hs.75066	NM_004622	ENSG00000211460	TSN	BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN	translin	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr2-3984	chr2	122996850	122998444	+	20.5	1594	Intergenic	Intergenic	484526	NR_048557	7247	Hs.75066	NM_004622	ENSG00000211460	TSN	BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN	translin	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr2-3986	chr2	123450869	123451869	+	14.7	1000	Intergenic	Intergenic	938248	NR_048557	7247	Hs.75066	NM_004622	ENSG00000211460	TSN	BCLF-1|C3PO|RCHF1|REHF-1|TBRBP|TRSLN	translin	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-3988	chr2	127623843	127624843	+	14.1	1000	Intergenic	THE1A-int|LTR|ERVL-MaLR	-32119	NM_001322244	101929926	Hs.98984	NM_001322244	ENSG00000237524	LOC101929926	-	uncharacterized LOC101929926	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr2-3990	chr2	127728008	127729576	+	24.3	1568	Intergenic	Intergenic	72330	NR_136239	101929926	Hs.98984	NM_001322244	ENSG00000237524	LOC101929926	-	uncharacterized LOC101929926	protein-coding	24.32	0.97	25.07216495	2.01E-20
chr2-3992	chr2	127735507	127737338	+	29.4	1831	Intergenic	Intergenic	79960	NR_136239	101929926	Hs.98984	NM_001322244	ENSG00000237524	LOC101929926	-	uncharacterized LOC101929926	protein-coding	29.44	3.88	7.587628866	2.58E-13
chr2-3993	chr2	127762508	127763815	+	20.5	1307	Intergenic	LTR39|LTR|ERV1	76480	NM_001320634	274	Hs.193163	NM_004305	ENSG00000136717	BIN1	AMPH2|AMPHL|SH3P9	bridging integrator 1	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr2-3995	chr2	127846805	127847805	+	15.4	1000	"intron (NM_139351, intron 1 of 12)"	"intron (NM_139351, intron 1 of 12)"	-5179	NM_001320642	274	Hs.193163	NM_004305	ENSG00000136717	BIN1	AMPH2|AMPHL|SH3P9	bridging integrator 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr2-3997	chr2	127870381	127871381	+	14.1	1000	Intergenic	AluJb|SINE|Alu	-5978	NM_139344	274	Hs.193163	NM_004305	ENSG00000136717	BIN1	AMPH2|AMPHL|SH3P9	bridging integrator 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr2-4002	chr2	129885940	129886940	+	14.7	1000	Intergenic	LOR1-int|LTR|ERV1	145024	NR_122041	151121	Hs.531687	NM_001033657	ENSG00000204460	LINC01854	-	long intergenic non-protein coding RNA 1854	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr2-4006	chr2	129933375	129934851	+	19.8	1476	Intergenic	Intergenic	97351	NR_122041	151121	Hs.531687	NM_001033657	ENSG00000204460	LINC01854	-	long intergenic non-protein coding RNA 1854	ncRNA	19.84	4.37	4.540045767	3.16E-06
chr2-4009	chr2	130242554	130243554	+	12.8	1000	Intergenic	Intergenic	-211590	NR_122040	151121	Hs.531687	NM_001033657	ENSG00000204460	LINC01854	-	long intergenic non-protein coding RNA 1854	ncRNA	12.8	1.94	6.597938144	4.51E-06
chr2-4019	chr2	131594307	131595307	+	14.1	1000	Intergenic	CpG	-79417	NM_015320	50649	Hs.469935	NM_015320	ENSG00000136002	ARHGEF4	ASEF|ASEF1|GEF4|STM6	Rho guanine nucleotide exchange factor 4	protein-coding	14.08	0	14.5040551	3.99E-13
chr2-4021	chr2	131755611	131756611	+	14.1	1000	"intron (NM_015320, intron 4 of 13)"	L1MC2|LINE|L1	81141	NM_032995	50649	Hs.469935	NM_015320	ENSG00000136002	ARHGEF4	ASEF|ASEF1|GEF4|STM6	Rho guanine nucleotide exchange factor 4	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr2-4022	chr2	132169209	132170209	+	15.4	1000	Intergenic	Intergenic	9235	NR_036499	389043	Hs.586791	NR_036499		LINC01120	-	long intergenic non-protein coding RNA 1120	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr2-4025	chr2	132334145	132335145	+	15.4	1000	Intergenic	Intergenic	-19702	NR_033885	440915	Hs.631267	NM_001017421		POTEKP	ACT|ACTBL3|POTE2delta|POTEK	"POTE ankyrin domain family member K, pseudogene"	pseudo	15.36	1.94	7.917525773	7.67E-08
chr2-4026	chr2	133173034	133174034	+	14.7	1000	promoter-TSS (NM_001508)	promoter-TSS (NM_001508)	-613	NM_001508	2863	Hs.432395	NM_001508	ENSG00000183840	GPR39	-	G protein-coupled receptor 39	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-4027	chr2	133520896	133521896	+	15.4	1000	"intron (NM_207481, intron 14 of 17)"	L2c|LINE|L2	-92244	NM_001077427	116372	Hs.432395	NM_144586	ENSG00000150551	LYPD1	LYPDC1|PHTS	LY6/PLAUR domain containing 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-4028	chr2	133811218	133812218	+	14.7	1000	"intron (NM_207481, intron 6 of 17)"	"intron (NM_207481, intron 6 of 17)"	138588	NR_135572	101928185	Hs.680114	NR_135572	ENSG00000233729	LOC101928185	-	uncharacterized LOC101928185	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr2-4029	chr2	134606661	134607661	+	14.7	1000	Intergenic	Intergenic	-277535	NR_037450	100500878		NR_037450	ENSG00000263813	MIR3679	mir-3679	microRNA 3679	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr2-4030	chr2	134727425	134728425	+	14.1	1000	Intergenic	Intergenic	-156771	NR_037450	100500878		NR_037450	ENSG00000263813	MIR3679	mir-3679	microRNA 3679	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr2-4032	chr2	135248599	135249599	+	14.7	1000	"intron (NM_030923, intron 5 of 7)"	"intron (NM_030923, intron 5 of 7)"	227472	NM_030923	81615	Hs.369471	NM_030923	ENSG00000152128	TMEM163	DC29|SV31	transmembrane protein 163	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-4033	chr2	135280404	135281404	+	14.7	1000	"intron (NM_030923, intron 4 of 7)"	"intron (NM_030923, intron 4 of 7)"	195667	NM_030923	81615	Hs.369471	NM_030923	ENSG00000152128	TMEM163	DC29|SV31	transmembrane protein 163	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr2-4034	chr2	135287933	135288933	+	15.4	1000	"intron (NM_030923, intron 4 of 7)"	"intron (NM_030923, intron 4 of 7)"	188138	NM_030923	81615	Hs.369471	NM_030923	ENSG00000152128	TMEM163	DC29|SV31	transmembrane protein 163	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-4044	chr2	143692780	143693780	+	15.4	1000	"intron (NM_001199241, intron 5 of 14)"	HERVH48-int|LTR|ERV1	58085	NM_001199241	8942	Hs.470126	NM_003937	ENSG00000115919	KYNU	KYNUU	kynureninase	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr2-4045	chr2	145138633	145139633	+	14.7	1000	Intergenic	Intergenic	-49032	NM_001284234	79712	Hs.44780	NM_024659	ENSG00000121964	GTDC1	Hmat-Xa|mat-Xa	glycosyltransferase like domain containing 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr2-4047	chr2	145495869	145496869	+	14.7	1000	"intron (NR_033870, intron 1 of 4)"	ERVL-E-int|LTR|ERVL	70835	NR_033870	401014	Hs.742290	NR_033870	ENSG00000226674	TEX41	DKFZp686O1327|LINC00953	testis expressed 41 (non-protein coding)	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr2-4051	chr2	146084043	146085043	+	14.7	1000	Intergenic	MER58A|DNA|hAT-Charlie	659009	NR_033870	401014	Hs.742290	NR_033870	ENSG00000226674	TEX41	DKFZp686O1327|LINC00953	testis expressed 41 (non-protein coding)	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr2-4052	chr2	146086562	146087562	+	15.4	1000	Intergenic	Intergenic	661528	NR_033870	401014	Hs.742290	NR_033870	ENSG00000226674	TEX41	DKFZp686O1327|LINC00953	testis expressed 41 (non-protein coding)	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr2-4053	chr2	149881159	149882881	+	24.3	1722	"non-coding (NR_111932, exon 20 of 20)"	"non-coding (NR_111932, exon 20 of 20)"	-12961	NM_177964	130576	Hs.357567	NM_177964	ENSG00000150556	LYPD6B	CT116|LYPD7	LY6/PLAUR domain containing 6B	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr2-4056	chr2	150075773	150076773	+	14.7	1000	Intergenic	Intergenic	101585	NM_001317002	130576	Hs.357567	NM_177964	ENSG00000150556	LYPD6B	CT116|LYPD7	LY6/PLAUR domain containing 6B	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-4057	chr2	150101895	150102895	+	14.7	1000	Intergenic	CR1_Mam|LINE|CR1	-84104	NM_001195685	130574	Hs.21929	NM_194317	ENSG00000187123	LYPD6	-	LY6/PLAUR domain containing 6	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-4058	chr2	152706933	152707933	+	14.7	1000	"intron (NM_000726, intron 12 of 13)"	"intron (NM_000726, intron 12 of 13)"	-22424	NM_012097	26225	Hs.470233	NM_012097	ENSG00000162980	ARL5A	ARFLP5|ARL5	ADP ribosylation factor like GTPase 5A	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-4061	chr2	153192171	153193658	+	21.8	1487	"intron (NM_052905, intron 1 of 25)"	CpG	1163	NM_052905	114793	Hs.654630	NM_052905	ENSG00000157827	FMNL2	FHOD2	formin like 2	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr2-4062	chr2	153314455	153315455	+	14.7	1000	"intron (NM_052905, intron 1 of 25)"	"intron (NM_052905, intron 1 of 25)"	123204	NM_052905	114793	Hs.654630	NM_052905	ENSG00000157827	FMNL2	FHOD2	formin like 2	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr2-4063	chr2	159608922	159609922	+	15.4	1000	Intergenic	MLT1L|LTR|ERVL-MaLR	-17908	NR_135242	100129029	Hs.630724	NR_135242	ENSG00000204380	PKP4-AS1	-	PKP4 antisense RNA 1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr2-4064	chr2	164801481	164802481	+	13.4	1000	Intergenic	Intergenic	-209464	NM_001321825	55137	Hs.593650	NM_018086	ENSG00000182263	FIGN	-	"fidgetin, microtubule severing factor"	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr2-4072	chr2	171162363	171163363	+	14.1	1000	"intron (NM_001083615, intron 7 of 33)"	MLT1H1|LTR|ERVL-MaLR	44590	NR_110576	101929753	Hs.534101	NR_110576		LOC101929753	-	uncharacterized LOC101929753	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr2-4075	chr2	171231607	171232607	+	14.1	1000	"intron (NM_001083615, intron 9 of 33)"	"intron (NM_001083615, intron 9 of 33)"	-24654	NR_110576	101929753	Hs.534101	NR_110576		LOC101929753	-	uncharacterized LOC101929753	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr2-4078	chr2	171251392	171252392	+	15.4	1000	"intron (NM_001083615, intron 16 of 33)"	"intron (NM_001083615, intron 16 of 33)"	-44439	NR_110576	101929753	Hs.534101	NR_110576		LOC101929753	-	uncharacterized LOC101929753	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr2-4080	chr2	171274658	171275658	+	15.4	1000	"intron (NM_001083615, intron 22 of 33)"	"intron (NM_001083615, intron 22 of 33)"	-67705	NR_110576	101929753	Hs.534101	NR_110576		LOC101929753	-	uncharacterized LOC101929753	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr2-4083	chr2	171373715	171374715	+	15.4	1000	"intron (NM_001083615, intron 28 of 33)"	"intron (NM_001083615, intron 28 of 33)"	-166762	NR_110576	101929753	Hs.534101	NR_110576		LOC101929753	-	uncharacterized LOC101929753	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr2-4089	chr2	171678111	171679111	+	15.4	1000	"exon (NM_013445, exon 3 of 7)"	"exon (NM_013445, exon 3 of 7)"	5411	NM_013445	2571	Hs.420036	NM_000817	ENSG00000128683	GAD1	CPSQ1|GAD|SCP	glutamate decarboxylase 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-4091	chr2	171768762	171769762	+	15.4	1000	Intergenic	AluSx4|SINE|Alu	-15686	NM_001201428	26003	Hs.431317	NM_015530	ENSG00000115806	GORASP2	GOLPH6|GRASP55|GRS2|p59	golgi reassembly stacking protein 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-4092	chr2	175190605	175197453	+	122.9	6848	"non-coding (NR_038897, exon 3 of 3)"	"non-coding (NR_038897, exon 3 of 3)"	3274	NR_038897	285084	Hs.275398	NR_038897	ENSG00000231453	LINC01305	-	long intergenic non-protein coding RNA 1305	ncRNA	122.9	19.9	6.175879397	5.27E-43
chr2-4096	chr2	175599906	175600906	+	14.7	1000	Intergenic	Intergenic	28794	NM_001039523	1134	Hs.434479	NM_000079	ENSG00000138435	CHRNA1	ACHRA|ACHRD|CHRNA|CMS1A|CMS1B|CMS2A|FCCMS|SCCMS	cholinergic receptor nicotinic alpha 1 subunit	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-4097	chr2	175604384	175605781	+	23	1397	Intergenic	AluSx|SINE|Alu	24118	NM_001039523	1134	Hs.434479	NM_000079	ENSG00000138435	CHRNA1	ACHRA|ACHRD|CHRNA|CMS1A|CMS1B|CMS2A|FCCMS|SCCMS	cholinergic receptor nicotinic alpha 1 subunit	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr2-4098	chr2	175610068	175612238	+	33.9	2170	Intergenic	Intergenic	18047	NM_001039523	1134	Hs.434479	NM_000079	ENSG00000138435	CHRNA1	ACHRA|ACHRD|CHRNA|CMS1A|CMS1B|CMS2A|FCCMS|SCCMS	cholinergic receptor nicotinic alpha 1 subunit	protein-coding	33.92	6.31	5.375594295	2.25E-11
chr2-4100	chr2	176159455	176160455	+	15.4	1000	Intergenic	Intergenic	-113465	NM_001190329	518	Hs.429	NM_001689	ENSG00000154518	ATP5G3	P3	"ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9)"	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr2-4102	chr2	176265578	176266578	+	14.7	1000	Intergenic	Intergenic	-219588	NM_001190329	518	Hs.429	NM_001689	ENSG00000154518	ATP5G3	P3	"ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9)"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-4103	chr2	176283272	176284272	+	14.1	1000	Intergenic	Intergenic	-237282	NM_001190329	518	Hs.429	NM_001689	ENSG00000154518	ATP5G3	P3	"ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9)"	protein-coding	14.08	0	14.5040551	3.99E-13
chr2-4118	chr2	176995325	176996588	+	18.6	1263	"intron (NM_001199746, intron 1 of 1)"	"intron (NM_001199746, intron 1 of 1)"	1488	NM_019558	3234	Hs.301963	NM_019558	ENSG00000175879	HOXD8	HOX4|HOX4E|HOX5.4	homeobox D8	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr2-4125	chr2	177025746	177027691	+	36.5	1945	Intergenic	Intergenic	-2087	NM_006898	3232	Hs.93574	NM_006898	ENSG00000128652	HOXD3	HOX1D|HOX4|HOX4A|Hox-4.1	homeobox D3	protein-coding	36.48	2.91	12.53608247	3.62E-21
chr2-4129	chr2	177500577	177501577	+	14.1	1000	"intron (NR_040001, intron 1 of 2)"	"intron (NR_040001, intron 1 of 2)"	1225	NR_040001	375295	Hs.636452	NR_040001		LINC01116	-	long intergenic non-protein coding RNA 1116	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr2-4135	chr2	177673391	177674391	+	15.4	1000	Intergenic	Intergenic	171409	NR_110599	102724224	Hs.663125	NR_110599	ENSG00000224577	LINC01117	-	long intergenic non-protein coding RNA 1117	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr2-4142	chr2	178689418	178690418	+	14.7	1000	"intron (NM_001077358, intron 5 of 18)"	"intron (NM_001077358, intron 5 of 18)"	63548	NM_001077196	50940	Hs.570273	NM_016953	ENSG00000128655	PDE11A	PPNAD2	phosphodiesterase 11A	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-4144	chr2	178936121	178937990	+	26.9	1869	"exon (NM_016953, exon 1 of 20)"	"exon (NM_016953, exon 1 of 20)"	427	NM_016953	50940	Hs.570273	NM_016953	ENSG00000128655	PDE11A	PPNAD2	phosphodiesterase 11A	protein-coding	26.88	2.91	9.237113402	7.03E-14
chr2-4152	chr2	189101101	189102101	+	15.4	1000	"intron (NR_126396, intron 1 of 2)"	MER41-int|LTR|ERV1	50817	NR_126396	104355152		NR_126396	ENSG00000231689	LINC01090	-	long intergenic non-protein coding RNA 1090	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr2-4154	chr2	192600998	192603210	+	38.4	2212	Intergenic	Intergenic	47197	NR_131917	105747689	Hs.104972	NR_131917		LOC105747689	-	uncharacterized LOC105747689	ncRNA	38.4	8.25	4.654545455	1.43E-11
chr2-4157	chr2	199183893	199185236	+	21.1	1343	"intron (NR_110267, intron 2 of 2)"	"intron (NR_110267, intron 2 of 2)"	55257	NR_110267	101927619	Hs.632942	NR_110267		LINC01923	-	long intergenic non-protein coding RNA 1923	ncRNA	21.12	3.88	5.443298969	1.44E-07
chr2-4158	chr2	200328733	200332896	+	53.1	4163	promoter-TSS (NM_001172517)	promoter-TSS (NM_001172517)	-983	NM_001172517	23314	Hs.516617	NM_015265	ENSG00000119042	SATB2	GLSS	SATB homeobox 2	protein-coding	53.13	6.8	7.813235294	8.94E-23
chr2-4161	chr2	200683722	200684722	+	14.1	1000	"intron (NR_034096, intron 3 of 3)"	"intron (NR_034096, intron 3 of 3)"	31674	NR_034096	348751	Hs.734578	NR_034096	ENSG00000226124	FTCDNL1	FONG	formiminotransferase cyclodeaminase N-terminal like	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr2-4162	chr2	200714124	200716341	+	39.7	2217	"intron (NR_034096, intron 1 of 3)"	"intron (NR_034096, intron 1 of 3)"	664	NR_034096	348751	Hs.734578	NR_034096	ENSG00000226124	FTCDNL1	FONG	formiminotransferase cyclodeaminase N-terminal like	ncRNA	39.69	4.85	8.183505155	2.73E-18
chr2-4166	chr2	201526340	201527340	+	14.7	1000	"intron (NM_001159, intron 30 of 34)"	"intron (NM_001159, intron 30 of 34)"	-33606	NR_135011	107161151	Hs.148269	NR_135011		AOX3P-AOX2P	AOX3/AOX3L1	AOX3P-AOX2P readthrough	pseudo	14.72	1.94	7.587628866	6.14E-07
chr2-4170	chr2	204964140	204965140	+	14.1	1000	Intergenic	AluSp|SINE|Alu	163169	NM_012092	29851	Hs.56247	NM_012092	ENSG00000163600	ICOS	AILIM|CD278|CVID1	inducible T-cell costimulator	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr2-4171	chr2	205013472	205014472	+	15.4	1000	Intergenic	L1MA9|LINE|L1	212501	NM_012092	29851	Hs.56247	NM_012092	ENSG00000163600	ICOS	AILIM|CD278|CVID1	inducible T-cell costimulator	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-4173	chr2	205400595	205401595	+	15.4	1000	Intergenic	MER39|LTR|ERV1	-9421	NM_152526	117583	Hs.657382	NM_057177	ENSG00000116117	PARD3B	ALS2CR19|PAR3B|PAR3L|PAR3beta	par-3 family cell polarity regulator beta	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr2-4175	chr2	206610329	206611329	+	15.4	1000	"intron (NM_018534, intron 10 of 15)"	"intron (NM_018534, intron 10 of 15)"	63605	NM_201264	8828	Hs.471200	NM_003872	ENSG00000118257	NRP2	NP2|NPN2|PRO2714|VEGF165R2	neuropilin 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr2-4177	chr2	206674974	206675974	+	14.7	1000	Intergenic	MSTA|LTR|ERVL-MaLR	128250	NM_201264	8828	Hs.471200	NM_003872	ENSG00000118257	NRP2	NP2|NPN2|PRO2714|VEGF165R2	neuropilin 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr2-4178	chr2	206727108	206728108	+	14.7	1000	Intergenic	AluSz|SINE|Alu	180384	NM_201264	8828	Hs.471200	NM_003872	ENSG00000118257	NRP2	NP2|NPN2|PRO2714|VEGF165R2	neuropilin 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-4179	chr2	206743720	206744720	+	14.7	1000	Intergenic	Intergenic	196996	NM_201264	8828	Hs.471200	NM_003872	ENSG00000118257	NRP2	NP2|NPN2|PRO2714|VEGF165R2	neuropilin 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-4180	chr2	206772825	206775154	+	30.7	2329	Intergenic	Intergenic	176917	NM_017759	54891	Hs.445036	NM_017759	ENSG00000114933	INO80D	-	INO80 complex subunit D	protein-coding	30.72	4.85	6.334020619	3.34E-12
chr2-4183	chr2	207123666	207124666	+	14.1	1000	"intron (NR_104359, intron 4 of 5)"	AluJr|SINE|Alu	-15199	NM_020923	57683	Hs.110489	NM_020923	ENSG00000204186	ZDBF2	-	zinc finger DBF-type containing 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr2-4185	chr2	207313552	207314552	+	15.4	1000	"intron (NM_003812, intron 2 of 25)"	"intron (NM_003812, intron 2 of 25)"	5684	NM_003812	8745	Hs.370287	NM_003812	ENSG00000114948	ADAM23	MDC-3|MDC3	ADAM metallopeptidase domain 23	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-419	chr2	152889122	152890122	+	21.1	1000	"intron (NM_001145798, intron 2 of 12)"	L2a|LINE|L2	-59022	NM_001005747	785	Hs.120725	NM_000726	ENSG00000182389	CACNB4	CAB4|CACNLB4|EA5|EIG9|EJM|EJM4|EJM6	calcium voltage-gated channel auxiliary subunit beta 4	protein-coding	21.12	2.43	8.691358025	2.25E-10
chr2-4191	chr2	211066109	211067109	+	14.7	1000	"intron (NM_001608, intron 8 of 10)"	L2|LINE|L2	23606	NM_001608	33	Hs.471277	NM_001608	ENSG00000115361	ACADL	ACAD4|LCAD	"acyl-CoA dehydrogenase, long chain"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-4193	chr2	213400523	213402509	+	33.9	1986	"intron (NM_005235, intron 1 of 27)"	"intron (NM_005235, intron 1 of 27)"	1836	NM_001042599	2066	Hs.390729	NM_005235	ENSG00000178568	ERBB4	ALS19|HER4|p180erbB4	erb-b2 receptor tyrosine kinase 4	protein-coding	33.92	6.31	5.375594295	2.25E-11
chr2-420	chr2	157177591	157179831	+	47.4	2240	Intergenic	Intergenic	10576	NM_006186	4929	Hs.563344	NM_006186	ENSG00000153234	NR4A2	HZF-3|NOT|NURR1|RNR1|TINUR	nuclear receptor subfamily 4 group A member 2	protein-coding	47.37	9.71	4.878475798	1.65E-14
chr2-4201	chr2	216763572	216764572	+	15.4	1000	Intergenic	Intergenic	-55813	NR_037195	646324	Hs.655713	NR_037195	ENSG00000235770	LINC00607	-	long intergenic non-protein coding RNA 607	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr2-4202	chr2	217239785	217240785	+	14.1	1000	Intergenic	Intergenic	-3535	NM_020814	57574	Hs.170388	NM_020814	ENSG00000144583	4-Mar	MARCH-IV|RNF174	membrane associated ring-CH-type finger 4	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr2-4203	chr2	217453087	217454087	+	14.1	1000	Intergenic	Intergenic	18074	NR_110392	101928232	Hs.694592	NR_110392		LINC01280	-	long intergenic non-protein coding RNA 1280	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr2-4206	chr2	217798898	217799898	+	14.7	1000	Intergenic	Intergenic	63903	NR_130782	101928327	Hs.350698	NR_130782	ENSG00000223874	LINC01921	-	long intergenic non-protein coding RNA 1921	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr2-421	chr2	158484094	158485480	+	21.1	1386	"intron (NM_001111032, intron 1 of 7)"	"intron (NM_001111032, intron 1 of 7)"	612	NM_001111032	130399	Hs.562901	NM_145259	ENSG00000123612	ACVR1C	ACVRLK7|ALK7	activin A receptor type 1C	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr2-4212	chr2	218874622	218876836	+	42.9	2214	Intergenic	Intergenic	-23928	NR_034176	285180	Hs.570069	NM_198483	ENSG00000188282	RUFY4	ZFYVE31	RUN and FYVE domain containing 4	protein-coding	42.89	1.94	22.10824742	2.46E-32
chr2-4213	chr2	218924527	218925527	+	14.7	1000	"non-coding (NR_002712, exon 1 of 1)"	"non-coding (NR_002712, exon 1 of 1)"	986	NR_002712	3580	Hs.647858	NR_002712		CXCR2P1	CXCR2P|IL8RBP	C-X-C motif chemokine receptor 2 pseudogene 1	pseudo	14.72	2.43	6.057613169	5.07E-06
chr2-4216	chr2	219002877	219003877	+	14.7	1000	Intergenic	Intergenic	12641	NM_001557	3579	Hs.846	NM_001557	ENSG00000180871	CXCR2	CD182|CDw128b|CMKAR2|IL8R2|IL8RA|IL8RB	C-X-C motif chemokine receptor 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-422	chr2	162930103	162931103	+	20.5	1000	"5' UTR (NM_001935, exon 1 of 26)"	"5' UTR (NM_001935, exon 1 of 26)"	449	NM_001935	1803	Hs.368912	NM_001935	ENSG00000197635	DPP4	ADABP|ADCP2|CD26|DPPIV|TP103	dipeptidyl peptidase 4	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr2-4220	chr2	219194324	219195324	+	14.7	1000	"intron (NR_125777, intron 2 of 3)"	"intron (NR_125777, intron 2 of 3)"	6922	NM_022572	25953	Hs.98475	NM_015488	ENSG00000127838	PNKD	BRP17|DYT8|FKSG19|FPD1|KIPP1184|MR-1|MR1|PDC|PKND1|TAHCCP2	paroxysmal nonkinesigenic dyskinesia	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr2-4222	chr2	219248565	219249565	+	14.7	1000	"exon (NM_000578, exon 3 of 15)"	"exon (NM_000578, exon 3 of 15)"	2313	NM_000578	6556	Hs.591607	NM_000578	ENSG00000018280	SLC11A1	LSH|NRAMP|NRAMP1	solute carrier family 11 member 1	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr2-4223	chr2	219680345	219681345	+	13.4	1000	TTS (NM_000784)	TTS (NM_000784)	-6968	NR_128707	103504730		NR_128707	ENSG00000283639	MIR9500	hsa-mir-9500	microRNA 9500	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr2-4224	chr2	219745427	219750331	+	85.8	4904	"intron (NM_025216, intron 2 of 3)"	"intron (NM_025216, intron 2 of 3)"	2624	NM_025216	80326	Hs.121540	NM_025216	ENSG00000135925	WNT10A	OODD|SSPS|STHAG4	Wnt family member 10A	protein-coding	85.77	12.62	6.796354992	6.44E-33
chr2-423	chr2	171222638	171225299	+	52.5	2661	"intron (NM_001083615, intron 8 of 33)"	"intron (NM_001083615, intron 8 of 33)"	-16515	NR_110576	101929753	Hs.534101	NR_110576		LOC101929753	-	uncharacterized LOC101929753	ncRNA	52.49	8.74	6.005720824	6.11E-19
chr2-4233	chr2	219901774	219902774	+	13.4	1000	"intron (NM_194302, intron 4 of 34)"	LTR33A_|LTR|ERVL	3999	NM_152389	255101	Hs.147762	NM_152389	ENSG00000181378	CFAP65	CCDC108	cilia and flagella associated protein 65	protein-coding	13.44	0.49	27.42857143	1.16E-11
chr2-4234	chr2	220133702	220137156	+	47.4	3454	"intron (NR_003063, intron 3 of 3)"	"intron (NR_003063, intron 3 of 3)"	-8611	NM_001039550	3300	Hs.77768	NM_006736	ENSG00000135924	DNAJB2	CMT2T|DSMA5|HSJ-1|HSJ1|HSPF3	DnaJ heat shock protein family (Hsp40) member B2	protein-coding	47.37	11.65	4.066094421	3.24E-12
chr2-4235	chr2	220161830	220165772	+	48.6	3942	"exon (NM_002846, exon 12 of 23)"	"exon (NM_002846, exon 12 of 23)"	-4879	NR_029688	406944		NR_029688	ENSG00000207647	MIR153-1	MIRN153-1|mir-153-1	microRNA 153-1	ncRNA	48.65	9.71	5.010298661	3.28E-15
chr2-4240	chr2	220268653	220270064	+	23	1411	Intergenic	Intergenic	-4614	NM_001319117	23549	Hs.258551	NM_012100	ENSG00000123992	DNPEP	ASPEP|DAP	aspartyl aminopeptidase	protein-coding	23.04	2.43	9.481481481	2.61E-12
chr2-4243	chr2	220389726	220394460	+	61.4	4734	"intron (NM_018674, intron 1 of 9)"	"intron (NM_018674, intron 1 of 9)"	13201	NM_018674	55515	Hs.87469	NM_018674	ENSG00000072182	ASIC4	ACCN4|BNAC4	acid sensing ion channel subunit family member 4	protein-coding	61.45	8.74	7.030892449	1.11E-24
chr2-4245	chr2	220420380	220421380	+	15.4	1000	"exon (NM_001173431, exon 14 of 14)"	"exon (NM_001173431, exon 14 of 14)"	-7011	NR_036082	100423039		NR_036082	ENSG00000265252	MIR3132	-	microRNA 3132	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr2-4247	chr2	220486539	220487539	+	15.4	1000	Intergenic	MamGypLTR1d|LTR|Gypsy	-5253	NM_005070	6508	Hs.1176	NM_005070	ENSG00000114923	SLC4A3	AE3|CAE3/BAE3|SLC2C	solute carrier family 4 member 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-4249	chr2	220610530	220611530	+	14.7	1000	Intergenic	L2|LINE|L2	118738	NR_048551	6508	Hs.1176	NM_005070	ENSG00000114923	SLC4A3	AE3|CAE3/BAE3|SLC2C	solute carrier family 4 member 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-4250	chr2	220689481	220690481	+	14.7	1000	Intergenic	Intergenic	81305	NR_036228	100422959		NR_036228	ENSG00000266518	MIR4268	-	microRNA 4268	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr2-4251	chr2	220736461	220737461	+	15.4	1000	Intergenic	Intergenic	34325	NR_036228	100422959		NR_036228	ENSG00000266518	MIR4268	-	microRNA 4268	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr2-4253	chr2	220768628	220771430	+	36.5	2802	Intergenic	MLT1J|LTR|ERVL-MaLR	1257	NR_036228	100422959		NR_036228	ENSG00000266518	MIR4268	-	microRNA 4268	ncRNA	36.48	7.28	5.010989011	1.89E-11
chr2-4254	chr2	220785373	220786373	+	14.1	1000	Intergenic	Intergenic	-14587	NR_036228	100422959		NR_036228	ENSG00000266518	MIR4268	-	microRNA 4268	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr2-4256	chr2	221023097	221024097	+	15.4	1000	Intergenic	HUERS-P1-int|LTR|ERV1	-252311	NR_036228	100422959		NR_036228	ENSG00000266518	MIR4268	-	microRNA 4268	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr2-4262	chr2	223176591	223177885	+	19.8	1294	Intergenic	CpG	-5952	NR_136638	440934	Hs.732732	NR_136638	ENSG00000237732	LOC440934	-	uncharacterized LOC440934	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr2-4266	chr2	224928312	224929312	+	15.4	1000	Intergenic	AluSz|SINE|Alu	-24776	NM_006216	5270	Hs.38449	NM_006216	ENSG00000135919	SERPINE2	GDN|GDNPF|PI-7|PI7|PN-1|PN1|PNI	serpin family E member 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-4271	chr2	227957080	227958080	+	14.7	1000	"intron (NM_000092, intron 20 of 47)"	HAL1|LINE|L1	71695	NM_000092	1286	Hs.591645	NM_000092	ENSG00000081052	COL4A4	CA44	collagen type IV alpha 4 chain	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-4273	chr2	228031908	228032908	+	12.8	1000	"intron (NM_000091, intron 1 of 51)"	"intron (NM_000091, intron 1 of 51)"	3127	NM_000091	1285	Hs.570065	NM_000091	ENSG00000169031	COL4A3	-	collagen type IV alpha 3 chain	protein-coding	12.8	2.43	5.267489712	2.99E-05
chr2-4274	chr2	230308941	230309941	+	14.1	1000	"intron (NM_139072, intron 8 of 12)"	AluSq|SINE|Alu	-173384	NM_001100818	55022	Hs.745038	NM_017933	ENSG00000153823	PID1	HMFN2073|NYGGF4|P-CLI1|PCLI1	phosphotyrosine interaction domain containing 1	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr2-4277	chr2	230489124	230490740	+	26.9	1616	"intron (NM_139072, intron 1 of 12)"	"intron (NM_139072, intron 1 of 12)"	89354	NM_139072	92737	Hs.234074	NM_139072	ENSG00000187957	DNER	UNQ26|bet	delta/notch like EGF repeat containing	protein-coding	26.88	2.43	11.0617284	2.19E-15
chr2-4278	chr2	230576883	230580392	+	65.9	3509	"intron (NM_139072, intron 1 of 12)"	CpG	649	NM_139072	92737	Hs.234074	NM_139072	ENSG00000187957	DNER	UNQ26|bet	delta/notch like EGF repeat containing	protein-coding	65.93	4.37	15.08695652	3.49E-41
chr2-4280	chr2	231775776	231776776	+	14.7	1000	"intron (NM_005683, intron 1 of 1)"	MLT1K|LTR|ERVL-MaLR	13665	NM_005683	9290	Hs.114545	NM_005683	ENSG00000135898	GPR55	LPIR1	G protein-coupled receptor 55	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-4284	chr2	232795281	232796575	+	21.8	1294	Intergenic	Intergenic	-4815	NM_024409	4880	Hs.247916	NM_024409	ENSG00000163273	NPPC	CNP|CNP2	natriuretic peptide C	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr2-4287	chr2	233278989	233279989	+	14.1	1000	Intergenic	Charlie7|DNA|hAT-Charlie	7937	NM_031313	251	Hs.333509	NM_031313	ENSG00000163286	ALPPL2	ALPG|ALPPL|GCAP	"alkaline phosphatase, placental like 2"	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr2-4289	chr2	233334073	233335617	+	25	1544	Intergenic	L1MA8|LINE|L1	14023	NM_001631	248	Hs.37009	NM_001631	ENSG00000163295	ALPI	IAP	"alkaline phosphatase, intestinal"	protein-coding	24.96	3.4	7.341176471	7.55E-11
chr2-4294	chr2	233384042	233385861	+	28.8	1819	promoter-TSS (NM_001195129)	promoter-TSS (NM_001195129)	-222	NM_001195129	646960	Hs.570310	NM_001195129	ENSG00000237412	PRSS56	MCOP6	"protease, serine 56"	protein-coding	28.8	0.97	29.69072165	9.47E-25
chr2-4295	chr2	233789554	233790554	+	14.7	1000	"intron (NM_019850, intron 4 of 14)"	"intron (NM_019850, intron 4 of 14)"	2807	NM_001114090	25791	Hs.97316	NM_019850	ENSG00000066248	NGEF	ARHGEF27|EPHEXIN	neuronal guanine nucleotide exchange factor	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-4296	chr2	234443220	234444220	+	15.4	1000	"intron (NM_018218, intron 9 of 30)"	L1MEf|LINE|L1	30516	NM_018218	55230	Hs.96513	NM_018218	ENSG00000085982	USP40	-	ubiquitin specific peptidase 40	protein-coding	15.36	0	15.82260557	1.26E-14
chr2-4299	chr2	234778166	234779166	+	15.4	1000	Intergenic	L1MD1|LINE|L1	-1611	NR_024322	151507	Hs.355809	NM_001166217	ENSG00000224287	MSL3P1	MSL3L2	male-specific lethal 3 homolog (Drosophila) pseudogene 1	pseudo	15.36	3.4	4.517647059	2.25E-05
chr2-4300	chr2	234781629	234782629	+	14.7	1000	Intergenic	Intergenic	-5074	NR_024322	151507	Hs.355809	NM_001166217	ENSG00000224287	MSL3P1	MSL3L2	male-specific lethal 3 homolog (Drosophila) pseudogene 1	pseudo	14.72	2.43	6.057613169	5.07E-06
chr2-4307	chr2	234961460	234962460	+	15.4	1000	"intron (NM_006944, intron 2 of 7)"	"intron (NM_006944, intron 2 of 7)"	2614	NM_006944	6694	Hs.444488	NM_006944	ENSG00000072080	SPP2	SPP-24|SPP24	secreted phosphoprotein 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr2-431	chr2	176533454	176534454	+	20.5	1000	Intergenic	L1PA7|LINE|L1	333119	NM_001305010	80856	Hs.209561	NM_030650	ENSG00000144320	LNPK	KIAA1715|LNP|LNP1|Ul|ulnaless	"lunapark, ER junction formation factor"	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr2-4311	chr2	235475449	235478083	+	41.6	2634	Intergenic	Intergenic	-71069	NM_001282431	10123	Hs.111554	NM_005737	ENSG00000188042	ARL4C	ARL7|LAK	ADP ribosylation factor like GTPase 4C	protein-coding	41.61	8.25	5.043636364	5.90E-13
chr2-4313	chr2	235501952	235502952	+	15.4	1000	Intergenic	Intergenic	-88860	NR_132376	106144537	Hs.580616	NR_132376	ENSG00000280744	LINC01173	-	long intergenic non-protein coding RNA 1173	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr2-4316	chr2	235621292	235622292	+	14.1	1000	"intron (NR_132376, intron 2 of 2)"	"intron (NR_132376, intron 2 of 2)"	30480	NR_132376	106144537	Hs.580616	NR_132376	ENSG00000280744	LINC01173	-	long intergenic non-protein coding RNA 1173	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr2-4319	chr2	235747388	235748388	+	15.4	1000	Intergenic	Intergenic	-112740	NM_014521	23677	Hs.516777	NM_014521	ENSG00000130147	SH3BP4	BOG25|TTP	SH3 domain binding protein 4	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-4324	chr2	235865932	235866932	+	13.4	1000	"intron (NM_014521, intron 1 of 5)"	"intron (NM_014521, intron 1 of 5)"	5804	NM_014521	23677	Hs.516777	NM_014521	ENSG00000130147	SH3BP4	BOG25|TTP	SH3 domain binding protein 4	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr2-4337	chr2	236413103	236414103	+	14.1	1000	promoter-TSS (NR_131900)	promoter-TSS (NR_131900)	-792	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	14.08	1.46	9.643835616	3.66E-08
chr2-4340	chr2	236461992	236462992	+	14.7	1000	"intron (NM_001037131, intron 1 of 17)"	"intron (NM_001037131, intron 1 of 17)"	48097	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr2-4341	chr2	236468894	236471035	+	32.6	2141	"intron (NM_001037131, intron 1 of 17)"	MamRep1161|DNA|TcMar	55569	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	32.64	4.37	7.469107551	5.18E-14
chr2-4343	chr2	236493456	236494773	+	18.6	1317	"intron (NM_001037131, intron 1 of 17)"	MLT1D|LTR|ERVL-MaLR	79719	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	18.56	0.97	19.13402062	1.12E-13
chr2-4346	chr2	236552117	236553117	+	14.1	1000	"intron (NM_001037131, intron 1 of 17)"	"intron (NM_001037131, intron 1 of 17)"	138222	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr2-4350	chr2	236605730	236608543	+	35.8	2813	"intron (NM_001037131, intron 1 of 17)"	"intron (NM_001037131, intron 1 of 17)"	192741	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	35.84	8.74	4.100686499	1.05E-09
chr2-4353	chr2	236632706	236633706	+	13.4	1000	"intron (NM_001037131, intron 3 of 17)"	"intron (NM_001037131, intron 3 of 17)"	218811	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr2-4357	chr2	236734364	236735364	+	14.1	1000	"intron (NM_001037131, intron 9 of 17)"	"intron (NM_001037131, intron 9 of 17)"	320469	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr2-4360	chr2	236902216	236903216	+	15.4	1000	"intron (NM_001037131, intron 13 of 17)"	"intron (NM_001037131, intron 13 of 17)"	173936	NM_001485	2637	Hs.184945	NM_001485	ENSG00000168505	GBX2	-	gastrulation brain homeobox 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-4361	chr2	236984343	236985343	+	14.7	1000	"intron (NM_001037131, intron 16 of 17)"	AluSz|SINE|Alu	91809	NM_001485	2637	Hs.184945	NM_001485	ENSG00000168505	GBX2	-	gastrulation brain homeobox 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr2-4363	chr2	237201324	237204895	+	46.1	3571	Intergenic	Intergenic	-30121	NM_212556	401036	Hs.639909	NM_212556	ENSG00000182177	ASB18	ASB-18	ankyrin repeat and SOCS box containing 18	protein-coding	46.09	9.71	4.746652935	8.12E-14
chr2-4367	chr2	237260122	237261122	+	15.4	1000	"intron (NM_024726, intron 15 of 18)"	"intron (NM_024726, intron 15 of 18)"	-87634	NM_212556	401036	Hs.639909	NM_212556	ENSG00000182177	ASB18	ASB-18	ankyrin repeat and SOCS box containing 18	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr2-4381	chr2	238256248	238259528	+	37.1	3280	"intron (NM_057167, intron 27 of 42)"	"intron (NM_057167, intron 27 of 42)"	64962	NM_057167	1293	Hs.233240	NM_004369	ENSG00000163359	COL6A3	BTHLM1|DYT27|UCMD1	collagen type VI alpha 3 chain	protein-coding	37.12	8.25	4.499393939	6.71E-11
chr2-4383	chr2	238266198	238267881	+	23	1683	"intron (NM_057167, intron 20 of 42)"	"intron (NM_057167, intron 20 of 42)"	55811	NM_057167	1293	Hs.233240	NM_004369	ENSG00000163359	COL6A3	BTHLM1|DYT27|UCMD1	collagen type VI alpha 3 chain	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr2-4386	chr2	238291029	238292029	+	15.4	1000	"intron (NM_057166, intron 2 of 40)"	AluSx|SINE|Alu	31321	NM_057167	1293	Hs.233240	NM_004369	ENSG00000163359	COL6A3	BTHLM1|DYT27|UCMD1	collagen type VI alpha 3 chain	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr2-4387	chr2	238304680	238305680	+	15.4	1000	"intron (NM_004369, intron 2 of 43)"	"intron (NM_004369, intron 2 of 43)"	17670	NM_057167	1293	Hs.233240	NM_004369	ENSG00000163359	COL6A3	BTHLM1|DYT27|UCMD1	collagen type VI alpha 3 chain	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr2-439	chr2	219866205	219867864	+	30.7	1659	promoter-TSS (NR_029867)	promoter-TSS (NR_029867)	97	NR_046086	100129175	Hs.147762	NR_046086	ENSG00000224090	LOC100129175	-	uncharacterized LOC100129175	ncRNA	30.72	2.91	10.55670103	6.73E-17
chr2-4394	chr2	239416461	239417461	+	14.7	1000	Intergenic	AluSx3|SINE|Alu	47179	NR_037809	151171	Hs.652076	NR_037809	ENSG00000225493	LINC01107	-	long intergenic non-protein coding RNA 1107	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr2-4398	chr2	239568059	239569553	+	21.8	1494	Intergenic	L1MEe|LINE|L1	-104666	NR_037809	151171	Hs.652076	NR_037809	ENSG00000225493	LINC01107	-	long intergenic non-protein coding RNA 1107	ncRNA	21.76	3.88	5.608247423	2.53E-08
chr2-4399	chr2	239572394	239573394	+	15.4	1000	Intergenic	AluSx3|SINE|Alu	-108754	NR_037809	151171	Hs.652076	NR_037809	ENSG00000225493	LINC01107	-	long intergenic non-protein coding RNA 1107	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr2-4401	chr2	239913341	239914341	+	14.7	1000	Intergenic	Intergenic	-65876	NR_034162	401039	Hs.516791	NM_001001698	ENSG00000227744	LINC01940	-	long intergenic non-protein coding RNA 1940	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr2-4402	chr2	239926368	239931982	+	68.5	5614	Intergenic	Intergenic	61435	NR_039642	100616397		NR_039642	ENSG00000266109	MIR4440	mir-4440	microRNA 4440	ncRNA	68.49	13.11	5.224256293	3.58E-21
chr2-4403	chr2	239949982	239950982	+	14.7	1000	Intergenic	AluSq|SINE|Alu	40128	NR_039642	100616397		NR_039642	ENSG00000266109	MIR4440	mir-4440	microRNA 4440	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr2-4404	chr2	240652522	240653522	+	14.7	1000	Intergenic	Intergenic	-31532	NR_037808	150935	Hs.555582	NR_037808		LOC150935	-	uncharacterized LOC150935	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr2-4405	chr2	240691979	240692979	+	14.7	1000	"intron (NR_037808, intron 1 of 2)"	Charlie8|DNA|hAT-Charlie	7925	NR_037808	150935	Hs.555582	NR_037808		LOC150935	-	uncharacterized LOC150935	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr2-4407	chr2	240706396	240707396	+	15.4	1000	"intron (NR_037808, intron 2 of 2)"	L1MEg|LINE|L1	22342	NR_037808	150935	Hs.555582	NR_037808		LOC150935	-	uncharacterized LOC150935	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr2-4408	chr2	240714137	240715473	+	17.3	1336	"intron (NR_037808, intron 2 of 2)"	"intron (NR_037808, intron 2 of 2)"	30251	NR_037808	150935	Hs.555582	NR_037808		LOC150935	-	uncharacterized LOC150935	ncRNA	17.28	0.97	17.81443299	2.06E-12
chr2-4409	chr2	240725587	240726587	+	14.1	1000	Intergenic	Intergenic	41533	NR_037808	150935	Hs.555582	NR_037808		LOC150935	-	uncharacterized LOC150935	ncRNA	14.08	0	14.5040551	3.99E-13
chr2-4412	chr2	241075783	241081344	+	80.7	5561	"3' UTR (NM_148961, exon 4 of 4)"	"3' UTR (NM_148961, exon 4 of 4)"	1510	NM_148961	150677	Hs.148586	NM_148961	ENSG00000178602	OTOS	OTOSP	otospiralin	protein-coding	80.65	17.47	4.616485404	2.46E-22
chr2-4417	chr2	241262757	241264412	+	23.7	1655	Intergenic	LTR16A|LTR|ERVL	-111531	NM_002081	2817	Hs.328232	NM_002081	ENSG00000063660	GPC1	glypican	glypican 1	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr2-4422	chr2	241624861	241625861	+	15.4	1000	Intergenic	MER49|LTR|ERV1	-3044	NM_001102467	653437	Hs.437167	NM_001102467	ENSG00000185176	AQP12B	INSSA3	aquaporin 12B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr2-4425	chr2	241677051	241678051	+	14.1	1000	"intron (NM_001330290, intron 36 of 47)"	"intron (NM_001330290, intron 36 of 47)"	46289	NM_198998	375318	Hs.534650	NM_198998	ENSG00000184945	AQP12A	AQP-12|AQP12|AQPX2	aquaporin 12A	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr2-4426	chr2	241712791	241713791	+	15.4	1000	"intron (NM_001330290, intron 12 of 47)"	"intron (NM_001330290, intron 12 of 47)"	46434	NM_001244008	547	Hs.516802	NM_004321	ENSG00000130294	KIF1A	ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104	kinesin family member 1A	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr2-443	chr2	231821716	231823000	+	23.7	1284	Intergenic	Intergenic	-32417	NM_005683	9290	Hs.114545	NM_005683	ENSG00000135898	GPR55	LPIR1	G protein-coupled receptor 55	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr2-4432	chr2	241850581	241852110	+	23.7	1529	Intergenic	L1MB3|LINE|L1	-15772	NM_001085437	79919	Hs.193745	NM_024861	ENSG00000172478	C2orf54	-	chromosome 2 open reading frame 54	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr2-4433	chr2	241856535	241857535	+	14.7	1000	Intergenic	Intergenic	-21462	NM_001085437	79919	Hs.193745	NM_024861	ENSG00000172478	C2orf54	-	chromosome 2 open reading frame 54	protein-coding	14.72	0	15.16333034	3.99E-13
chr2-4434	chr2	241869677	241871242	+	21.1	1565	Intergenic	Intergenic	-34886	NM_001085437	79919	Hs.193745	NM_024861	ENSG00000172478	C2orf54	-	chromosome 2 open reading frame 54	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr2-4436	chr2	242486077	242487454	+	18.6	1377	"intron (NR_033346, intron 1 of 1)"	"intron (NR_033346, intron 1 of 1)"	-11381	NM_032515	666	Hs.293753	NM_032515	ENSG00000176720	BOK	BCL2L9|BOKL	"BOK, BCL2 family apoptosis regulator"	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr2-446	chr2	235769663	235770915	+	22.4	1252	Intergenic	Intergenic	-90339	NM_014521	23677	Hs.516777	NM_014521	ENSG00000130147	SH3BP4	BOG25|TTP	SH3 domain binding protein 4	protein-coding	22.4	5.34	4.194756554	1.97E-06
chr2-450	chr2	237814524	237815782	+	23.7	1258	Intergenic	AluSx|SINE|Alu	149657	NR_135202	93463	Hs.652810	NR_135202	ENSG00000124835	LOC93463	-	uncharacterized LOC93463	ncRNA	23.68	5.82	4.068728522	1.51E-06
chr2-451	chr2	238775983	238779782	+	66.6	3799	"intron (NM_005855, intron 1 of 2)"	"intron (NM_005855, intron 1 of 2)"	9695	NM_001308353	10267	Hs.471783	NM_005855	ENSG00000132329	RAMP1	-	receptor activity modifying protein 1	protein-coding	66.57	12.62	5.27496038	3.79E-21
chr2-452	chr2	239699042	239700313	+	23.7	1271	Intergenic	Intergenic	-56996	NM_057179	117581	Hs.422585	NM_057179	ENSG00000233608	TWIST2	AMS|BBRSAY|DERMO1|FFDD3|SETLSS|bHLHa39	twist family bHLH transcription factor 2	protein-coding	23.68	1.94	12.20618557	6.71E-14
chr2-454	chr2	242773246	242774566	+	23.7	1320	Intergenic	L1MEg|LINE|L1	21879	NM_001167602	129807	Hs.551747	NM_080741	ENSG00000204099	NEU4	-	neuraminidase 4	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr2-459	chr2	3794856	3796590	+	28.8	1734	"intron (NM_001287444, intron 4 of 10)"	L2a|LINE|L2	44541	NM_001287444	728597	Hs.304233	NM_001287444	ENSG00000214866	DCDC2C	-	doublecortin domain containing 2C	protein-coding	28.8	3.88	7.422680412	1.97E-12
chr2-460	chr2	8758557	8759814	+	22.4	1257	Intergenic	MLT1C|LTR|ERVL-MaLR	-35263	NR_110257	101929567	Hs.634706	NR_110257	ENSG00000236008	LINC01814	-	long intergenic non-protein coding RNA 1814	ncRNA	22.4	3.88	5.773195876	2.53E-08
chr2-461	chr2	9402689	9403974	+	21.8	1285	"intron (NM_001135191, intron 1 of 26)"	"intron (NM_001135191, intron 1 of 26)"	56437	NM_003887	8853	Hs.555902	NM_003887	ENSG00000151693	ASAP2	AMAP2|CENTB3|DDEF2|PAG3|PAP|Pap-alpha|SHAG1	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 2"	protein-coding	21.76	4.37	4.979405034	1.32E-07
chr2-463	chr2	11515433	11516433	+	20.5	1000	Intergenic	Intergenic	-18174	NR_047499	100874055	Hs.102428	NR_047499	ENSG00000224177	LINC00570	ncRNA-a5	long intergenic non-protein coding RNA 570	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr2-464	chr2	12857152	12858685	+	28.8	1533	"5' UTR (NM_021643, exon 1 of 3)"	"5' UTR (NM_021643, exon 1 of 3)"	920	NM_021643	28951	Hs.467751	NM_021643	ENSG00000071575	TRIB2	C5FW|GS3955|TRB2	tribbles pseudokinase 2	protein-coding	28.8	5.34	5.393258427	7.39E-10
chr2-473	chr2	29836506	29837766	+	23.7	1260	"intron (NM_004304, intron 3 of 28)"	MIR3|SINE|MIR	-138893	NR_136317	105374389	Hs.196534	NR_136317		LOC105374389	-	uncharacterized LOC105374389	ncRNA	23.68	2.91	8.137457045	4.85E-11
chr2-477	chr2	42252064	42253064	+	20.5	1000	Intergenic	Intergenic	-22597	NM_138370	91461	Hs.408542	NM_138370	ENSG00000162878	PKDCC	SGK493|Vlk	"protein kinase domain containing, cytoplasmic"	protein-coding	20.48	2.43	8.427983539	2.25E-10
chr2-481	chr2	45501311	45502311	+	19.2	1000	Intergenic	Intergenic	-19731	NR_033831	400952	Hs.468368	NR_033831	ENSG00000205054	LINC01121	UNQ6975	long intergenic non-protein coding RNA 1121	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr2-482	chr2	46098885	46099885	+	20.5	1000	"intron (NM_005400, intron 2 of 14)"	L2a|LINE|L2	220342	NM_005400	5581	Hs.580351	NM_005400	ENSG00000171132	PRKCE	PKCE|nPKC-epsilon	protein kinase C epsilon	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr2-486	chr2	70688869	70692982	+	62.1	4113	"intron (NM_001308159, intron 3 of 5)"	"intron (NM_001308159, intron 3 of 5)"	17847	NR_046798	100874273	Hs.682157	NR_046798	ENSG00000224606	TGFA-IT1	-	TGFA intronic transcript 1	ncRNA	62.09	15.05	4.125581395	1.94E-15
chr2-487	chr2	70879364	70880364	+	20.5	1000	Intergenic	L1MEc|LINE|L1	-98717	NM_001099691	7039	Hs.170009	NM_003236	ENSG00000163235	TGFA	TFGA	transforming growth factor alpha	protein-coding	20.48	2.43	8.427983539	2.25E-10
chr2-492	chr2	85948699	85950038	+	25.6	1339	Intergenic	Intergenic	27954	NM_006433	10578	Hs.105806	NM_006433	ENSG00000115523	GNLY	D2S69E|LAG-2|LAG2|NKG5|TLA519	granulysin	protein-coding	25.6	5.82	4.39862543	7.99E-08
chr2-517	chr2	121163455	121164709	+	23	1254	Intergenic	MER102b|DNA|hAT-Charlie	59843	NR_027181	84931	Hs.334519	NM_032845	ENSG00000280409	LINC01101	-	long intergenic non-protein coding RNA 1101	ncRNA	23.04	2.91	7.917525773	4.85E-11
chr2-521	chr2	136802967	136804231	+	23.7	1264	Intergenic	Intergenic	-60345	NM_001293312	1615	Hs.503787	NM_001349	ENSG00000115866	DARS	HBSL|aspRS	aspartyl-tRNA synthetase	protein-coding	23.68	3.4	6.964705882	5.45E-10
chr2-522	chr2	146011470	146012470	+	19.8	1000	Intergenic	L2|LINE|L2	586436	NR_033870	401014	Hs.742290	NR_033870	ENSG00000226674	TEX41	DKFZp686O1327|LINC00953	testis expressed 41 (non-protein coding)	ncRNA	19.84	1.46	13.5890411	1.82E-12
chr2-531	chr2	176613568	176614568	+	19.8	1000	Intergenic	AluSc5|SINE|Alu	253005	NM_001305010	80856	Hs.209561	NM_030650	ENSG00000144320	LNPK	KIAA1715|LNP|LNP1|Ul|ulnaless	"lunapark, ER junction formation factor"	protein-coding	19.84	1.46	13.5890411	1.82E-12
chr2-534	chr2	179057873	179062122	+	71.7	4249	"intron (NM_001201481, intron 1 of 23)"	CpG	789	NM_032523	114880	Hs.318775	NM_032523	ENSG00000079156	OSBPL6	ORP6	oxysterol binding protein like 6	protein-coding	71.69	16.5	4.344848485	6.87E-19
chr2-537	chr2	217224134	217225134	+	20.5	1000	"intron (NM_020814, intron 1 of 3)"	LTR36|LTR|ERV1	12116	NM_020814	57574	Hs.170388	NM_020814	ENSG00000144583	4-Mar	MARCH-IV|RNF174	membrane associated ring-CH-type finger 4	protein-coding	20.48	2.43	8.427983539	2.25E-10
chr2-541	chr2	224975930	224976930	+	20.5	1000	Intergenic	L1PB3|LINE|L1	-72394	NM_006216	5270	Hs.38449	NM_006216	ENSG00000135919	SERPINE2	GDN|GDNPF|PI-7|PI7|PN-1|PN1|PNI	serpin family E member 2	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr2-544	chr2	230932744	230935206	+	44.8	2462	promoter-TSS (NM_152527)	promoter-TSS (NM_152527)	-260	NM_152527	151473	Hs.504317	NM_152527	ENSG00000163053	SLC16A14	MCT14	solute carrier family 16 member 14	protein-coding	44.81	5.82	7.699312715	1.25E-19
chr2-545	chr2	232468244	232470810	+	40.3	2566	Intergenic	Intergenic	11952	NM_152614	165100	Hs.98104	NM_152614	ENSG00000177673	TEX44	C2orf57	testis expressed 44	protein-coding	40.33	9.22	4.374186551	4.47E-11
chr2-549	chr2	241764275	241765275	+	21.1	1000	Intergenic	C-rich|Low_complexity|Low_complexity	-5050	NM_001330289	547	Hs.516802	NM_004321	ENSG00000130294	KIF1A	ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104	kinesin family member 1A	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr2-556	chr2	9492449	9497362	+	74.9	4913	"intron (NM_001135191, intron 12 of 26)"	"intron (NM_001135191, intron 12 of 26)"	67884	NR_134951	9270	Hs.467662	NM_004763	ENSG00000119185	ITGB1BP1	ICAP-1A|ICAP-1B|ICAP-1alpha|ICAP1|ICAP1A|ICAP1B	integrin subunit beta 1 binding protein 1	protein-coding	74.89	11.65	6.42832618	2.36E-27
chr2-558	chr2	20373188	20374188	+	20.5	1000	Intergenic	Intergenic	51239	NM_002997	6382	Hs.224607	NM_002997	ENSG00000115884	SDC1	CD138|SDC|SYND1|syndecan	syndecan 1	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr2-563	chr2	23781086	23782673	+	27.5	1587	"intron (NM_052920, intron 2 of 13)"	L2b|LINE|L2	173581	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	27.52	1.94	14.18556701	2.90E-17
chr2-564	chr2	25352644	25355103	+	49.9	2459	"intron (NM_014971, intron 8 of 22)"	MER5C|DNA|hAT-Charlie	37847	NM_000939	5443	Hs.1897	NM_000939	ENSG00000115138	POMC	ACTH|CLIP|LPH|MSH|NPP|POC	proopiomelanocortin	protein-coding	49.93	9.71	5.142121524	6.34E-16
chr2-567	chr2	27071267	27074903	+	62.1	3636	"intron (NM_001253724, intron 1 of 12)"	"intron (NM_001253724, intron 1 of 12)"	1793	NM_001253724	56896	Hs.299315	NM_020134	ENSG00000157851	DPYSL5	CRAM|CRMP-5|CRMP5|Ulip6	dihydropyrimidinase like 5	protein-coding	62.09	10.68	5.813670412	3.83E-21
chr2-575	chr2	42117267	42118875	+	28.2	1608	"intron (NR_033996, intron 2 of 2)"	MER21C|LTR|ERVL	13376	NR_033996	388942	Hs.631883	NR_033996	ENSG00000214691	LINC01913	-	long intergenic non-protein coding RNA 1913	ncRNA	28.16	5.82	4.838487973	3.50E-09
chr2-590	chr2	54684961	54686220	+	23	1259	"intron (NM_003128, intron 1 of 35)"	"intron (NM_003128, intron 1 of 35)"	2136	NM_003128	6711	Hs.503178	NM_003128	ENSG00000115306	SPTBN1	ELF|HEL102|SPTB2|betaSpII	"spectrin beta, non-erythrocytic 1"	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr2-597	chr2	71740063	71741340	+	24.3	1277	"intron (NM_001130985, intron 6 of 54)"	"intron (NM_001130985, intron 6 of 54)"	46869	NM_001130987	8291	Hs.252180	NM_003494	ENSG00000135636	DYSF	FER1L1|LGMD2B|MMD1	dysferlin	protein-coding	24.32	1.94	12.53608247	5.33E-15
chr2-624	chr2	113391911	113393161	+	20.5	1250	Intergenic	Intergenic	9221	NR_033871	400999	Hs.585221	NR_033871		FLJ42351	-	uncharacterized LOC400999	ncRNA	20.48	3.4	6.023529412	2.41E-08
chr2-627	chr2	128290770	128291770	+	20.5	1000	Intergenic	Intergenic	-2108	NM_001080527	4648	Hs.154578	NM_001080527	ENSG00000169994	MYO7B	-	myosin VIIB	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr2-632	chr2	169196664	169197664	+	20.5	1000	Intergenic	Intergenic	-93059	NM_013233	27347	Hs.276271	NM_013233	ENSG00000198648	STK39	DCHT|PASK|SPAK	serine/threonine kinase 39	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr2-636	chr2	175593253	175594253	+	19.8	1000	Intergenic	Intergenic	35447	NM_001039523	1134	Hs.434479	NM_000079	ENSG00000138435	CHRNA1	ACHRA|ACHRD|CHRNA|CMS1A|CMS1B|CMS2A|FCCMS|SCCMS	cholinergic receptor nicotinic alpha 1 subunit	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr2-637	chr2	176549354	176550902	+	28.2	1548	Intergenic	Intergenic	316945	NM_001305010	80856	Hs.209561	NM_030650	ENSG00000144320	LNPK	KIAA1715|LNP|LNP1|Ul|ulnaless	"lunapark, ER junction formation factor"	protein-coding	28.16	4.37	6.443935927	1.84E-11
chr2-645	chr2	201034008	201035008	+	19.2	1000	Intergenic	Intergenic	-136096	NM_015535	26010	Hs.120323	NM_015535	ENSG00000196141	SPATS2L	DNAPTP6|SGNP	spermatogenesis associated serine rich 2 like	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr2-646	chr2	216439996	216441310	+	22.4	1314	Intergenic	Intergenic	122223	NR_110607	102724849	Hs.116161	NR_110607	ENSG00000225166	LOC102724849	-	uncharacterized LOC102724849	ncRNA	22.4	4.85	4.618556701	5.54E-07
chr2-647	chr2	217138138	217139393	+	23	1255	"intron (NM_020814, intron 3 of 3)"	LTR87|LTR|ERVL?	57153	NR_037701	150967	Hs.56876	NM_001199924	ENSG00000260804	LINC01963	PKI55	long intergenic non-protein coding RNA 1963	ncRNA	23.04	2.91	7.917525773	4.85E-11
chr2-655	chr2	235673867	235674867	+	19.2	1000	Intergenic	MIR|SINE|MIR	83055	NR_132376	106144537	Hs.580616	NR_132376	ENSG00000280744	LINC01173	-	long intergenic non-protein coding RNA 1173	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr2-656	chr2	236566435	236568704	+	35.2	2269	"intron (NM_001037131, intron 1 of 17)"	"intron (NM_001037131, intron 1 of 17)"	153174	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	35.2	5.82	6.048109966	6.75E-13
chr2-658	chr2	236754843	236756422	+	26.9	1579	"intron (NM_001037131, intron 9 of 17)"	"intron (NM_001037131, intron 9 of 17)"	321020	NM_001485	2637	Hs.184945	NM_001485	ENSG00000168505	GBX2	-	gastrulation brain homeobox 2	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr2-660	chr2	237024351	237025351	+	19.8	1000	"intron (NM_001037131, intron 16 of 17)"	AluSq2|SINE|Alu	51801	NM_001485	2637	Hs.184945	NM_001485	ENSG00000168505	GBX2	-	gastrulation brain homeobox 2	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr2-664	chr2	241052308	241054006	+	30.7	1698	Intergenic	Intergenic	22590	NM_001163424	150678	Hs.293884	NM_138336	ENSG00000172428	COPS9	CSNAP|MYEOV2	COP9 signalosome subunit 9	protein-coding	30.72	4.85	6.334020619	3.34E-12
chr2-670	chr2	241191969	241193224	+	23	1255	Intergenic	Intergenic	-112523	NM_148961	150677	Hs.148586	NM_148961	ENSG00000178602	OTOS	OTOSP	otospiralin	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr2-671	chr2	241232329	241233593	+	23.7	1264	Intergenic	Intergenic	-142154	NM_002081	2817	Hs.328232	NM_002081	ENSG00000063660	GPC1	glypican	glypican 1	protein-coding	23.68	0	24.39318358	2.80E-24
chr2-672	chr2	241239685	241240685	+	19.8	1000	Intergenic	Intergenic	-134930	NM_002081	2817	Hs.328232	NM_002081	ENSG00000063660	GPC1	glypican	glypican 1	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr2-675	chr2	241761386	241762732	+	23	1346	Intergenic	LTR33|LTR|ERVL	-2334	NM_001330289	547	Hs.516802	NM_004321	ENSG00000130294	KIF1A	ATSV|C2orf20|HSN2C|MRD9|SPG30|UNC104	kinesin family member 1A	protein-coding	23.04	0.97	23.75257732	5.03E-19
chr2-676	chr2	361718	362969	+	24.3	1251	Intergenic	Intergenic	-74035	NM_001002919	285016	Hs.355207	NM_001002919	ENSG00000189292	FAM150B	AUGA|PRO1097|RGPG542	family with sequence similarity 150 member B	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr2-682	chr2	3784637	3785637	+	19.2	1000	"intron (NM_001287444, intron 3 of 10)"	"intron (NM_001287444, intron 3 of 10)"	33955	NM_001287444	728597	Hs.304233	NM_001287444	ENSG00000214866	DCDC2C	-	doublecortin domain containing 2C	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr2-688	chr2	16802583	16803583	+	17.9	1000	"intron (NM_030797, intron 2 of 11)"	L2a|LINE|L2	44051	NM_030797	81553	Hs.467769	NM_030797	ENSG00000197872	FAM49A	-	family with sequence similarity 49 member A	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr2-692	chr2	23170191	23171191	+	18.6	1000	Intergenic	Intergenic	411340	NR_110577	102723362	Hs.502887	NR_110577	ENSG00000233587	LINC01884	-	long intergenic non-protein coding RNA 1884	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr2-695	chr2	37552361	37553361	+	19.8	1000	Intergenic	Intergenic	-8639	NM_005813	23683	Hs.660757	NM_005813	ENSG00000115825	PRKD3	EPK2|PKC-NU|PKD3|PRKCN|nPKC-NU	protein kinase D3	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr2-696	chr2	38107743	38108743	+	19.2	1000	Intergenic	LTR81B|LTR|Gypsy	-5237	NR_110012	101929559	Hs.468200	NR_110011	ENSG00000237803	LINC00211	NCRNA00211	long intergenic non-protein coding RNA 211	ncRNA	19.2	4.37	4.393592677	3.16E-06
chr2-700	chr2	42103806	42104806	+	19.8	1000	promoter-TSS (NR_033996)	promoter-TSS (NR_033996)	-389	NR_033996	388942	Hs.631883	NR_033996	ENSG00000214691	LINC01913	-	long intergenic non-protein coding RNA 1913	ncRNA	19.84	0.97	20.45360825	5.65E-15
chr2-701	chr2	45159453	45177261	+	274.6	17808	promoter-TSS (NM_005413)	promoter-TSS (NM_005413)	289	NR_103785	100506108	Hs.503113	NR_103785	ENSG00000236502	SIX3-AS1	SIX3OS	SIX3 antisense RNA 1	ncRNA	274.59	39.32	6.983468973	4.76E-103
chr2-711	chr2	68643123	68644123	+	17.3	1000	Intergenic	LTR27B|LTR|ERV1	50826	NR_133923	554251	Hs.164117	NM_001024680	ENSG00000204923	FBXO48	-	F-box protein 48	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr2-713	chr2	70639830	70640830	+	19.8	1000	Intergenic	Intergenic	68442	NR_046798	100874273	Hs.682157	NR_046798	ENSG00000224606	TGFA-IT1	-	TGFA intronic transcript 1	ncRNA	19.84	4.85	4.090721649	1.08E-05
chr2-717	chr2	71470428	71471428	+	19.8	1000	Intergenic	Intergenic	-16695	NM_020459	400961	Hs.416735	NM_020459	ENSG00000124374	PAIP2B	-	poly(A) binding protein interacting protein 2B	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr2-727	chr2	89121715	89123393	+	30.1	1678	Intergenic	Intergenic	10670	NR_039635	100616399		NR_039635	ENSG00000265510	MIR4436A	mir-4436a	microRNA 4436a	ncRNA	30.08	5.82	5.16838488	6.85E-10
chr2-737	chr2	97532183	97534605	+	48	2422	"intron (NM_017789, intron 2 of 14)"	"intron (NM_017789, intron 2 of 14)"	2341	NM_017789	54910	Hs.516220	NM_017789	ENSG00000168758	SEMA4C	M-SEMA-F|SEMACL1|SEMAF|SEMAI	semaphorin 4C	protein-coding	48.01	7.77	6.178893179	1.86E-17
chr2-742	chr2	101228748	101229748	+	19.2	1000	Intergenic	MIR3|SINE|MIR	49830	NM_024065	79031	Hs.469459	NM_024065	ENSG00000115539	PDCL3	HTPHLP|PHLP2A|PHLP3|VIAF|VIAF1	phosducin like 3	protein-coding	19.2	1.46	13.15068493	1.82E-12
chr2-744	chr2	109574830	109575830	+	19.2	1000	"intron (NM_022336, intron 1 of 11)"	"intron (NM_022336, intron 1 of 11)"	30498	NM_022336	10913	Hs.171971	NM_022336	ENSG00000135960	EDAR	DL|ECTD10A|ECTD10B|ED1R|ED3|ED5|EDA-A1R|EDA1R|EDA3|HRM1	ectodysplasin A receptor	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr2-745	chr2	110257957	110259218	+	19.2	1261	"intron (NM_001099289, intron 9 of 9)"	"intron (NM_001099289, intron 9 of 9)"	112647	NM_001321515	151011	Hs.469615	NM_144710	ENSG00000186522	10-Sep	-	septin 10	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr2-746	chr2	111787544	111788544	+	17.9	1000	"intron (NM_001142807, intron 14 of 17)"	"intron (NM_001142807, intron 14 of 17)"	85121	NR_122074	400997	Hs.652337	NR_122074	ENSG00000204581	ACOXL-AS1	-	ACOXL antisense RNA 1	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr2-747	chr2	119606101	119607954	+	33.3	1853	Intergenic	Intergenic	-1268	NM_001426	2019	Hs.271977	NM_001426	ENSG00000163064	EN1	-	engrailed homeobox 1	protein-coding	33.28	2.91	11.43642612	5.32E-19
chr2-748	chr2	121099913	121101777	+	29.4	1864	Intergenic	Intergenic	-2873	NM_002193	3625	Hs.1735	NM_002193	ENSG00000163083	INHBB	-	inhibin beta B subunit	protein-coding	29.44	2.91	10.11683849	7.13E-16
chr2-753	chr2	129597248	129598248	+	19.2	1000	Intergenic	Intergenic	-24426	NR_110278	101927881	Hs.570247	NR_110278		LOC101927881	-	uncharacterized LOC101927881	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr2-754	chr2	131085872	131087668	+	30.1	1796	Intergenic	Intergenic	12911	NM_001321119	84317	Hs.104203	NM_032357	ENSG00000136710	CCDC115	CDG2O|ccp1	coiled-coil domain containing 115	protein-coding	30.08	4.37	6.883295195	2.70E-12
chr2-763	chr2	165478219	165479219	+	19.8	1000	promoter-TSS (NM_004490)	promoter-TSS (NM_004490)	-359	NM_004490	2888	Hs.411881	NM_004490	ENSG00000115290	GRB14	-	growth factor receptor bound protein 14	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr2-765	chr2	171511973	171513337	+	25	1364	TTS (NM_138995)	TTS (NM_138995)	58422	NR_027433	440925	Hs.668461	NM_001013712	ENSG00000222033	LINC01124	-	long intergenic non-protein coding RNA 1124	ncRNA	24.96	3.88	6.432989691	6.68E-10
chr2-780	chr2	206546209	206548141	+	37.1	1932	promoter-TSS (NM_003872)	promoter-TSS (NM_003872)	-49	NM_201266	8828	Hs.471200	NM_003872	ENSG00000118257	NRP2	NP2|NPN2|PRO2714|VEGF165R2	neuropilin 2	protein-coding	37.12	4.85	7.653608247	1.78E-16
chr2-783	chr2	218813022	218814367	+	20.5	1345	Intergenic	Intergenic	-4898	NM_022648	7145	Hs.471381	NM_022648	ENSG00000079308	TNS1	MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS	tensin 1	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr2-784	chr2	219188279	219189279	+	19.8	1000	"intron (NM_022572, intron 1 of 8)"	"intron (NM_022572, intron 1 of 8)"	877	NM_022572	25953	Hs.98475	NM_015488	ENSG00000127838	PNKD	BRP17|DYT8|FKSG19|FPD1|KIPP1184|MR-1|MR1|PDC|PKND1|TAHCCP2	paroxysmal nonkinesigenic dyskinesia	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr2-788	chr2	219887815	219892883	+	72.3	5068	TTS (NM_001278296)	TTS (NM_001278296)	15924	NM_152389	255101	Hs.147762	NM_152389	ENSG00000181378	CFAP65	CCDC108	cilia and flagella associated protein 65	protein-coding	72.33	11.65	6.208583691	9.49E-26
chr2-791	chr2	223158093	223159358	+	23	1265	"3' UTR (NM_000438, exon 4 of 4)"	"3' UTR (NM_000438, exon 4 of 4)"	-4141	NM_153038	151278	Hs.350729	NM_153038	ENSG00000163081	CCDC140	-	coiled-coil domain containing 140	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr2-797	chr2	232260616	232261977	+	17.9	1361	"intron (NM_145236, intron 1 of 1)"	"intron (NM_145236, intron 1 of 1)"	961	NM_145236	93010	Hs.299329	NM_145236	ENSG00000156966	B3GNT7	beta3GnT7	"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7"	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr2-802	chr2	235701691	235704088	+	39.7	2397	Intergenic	Intergenic	111577	NR_132376	106144537	Hs.580616	NR_132376	ENSG00000280744	LINC01173	-	long intergenic non-protein coding RNA 1173	ncRNA	39.69	8.74	4.541189931	1.21E-11
chr2-804	chr2	235881314	235882314	+	19.8	1000	"intron (NM_014521, intron 1 of 5)"	"intron (NM_014521, intron 1 of 5)"	21186	NM_014521	23677	Hs.516777	NM_014521	ENSG00000130147	SH3BP4	BOG25|TTP	SH3 domain binding protein 4	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr2-806	chr2	236000410	236001665	+	21.8	1255	Intergenic	Intergenic	140409	NM_014521	23677	Hs.516777	NM_014521	ENSG00000130147	SH3BP4	BOG25|TTP	SH3 domain binding protein 4	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr2-807	chr2	236548497	236550145	+	28.2	1648	"intron (NM_001037131, intron 1 of 17)"	"intron (NM_001037131, intron 1 of 17)"	134926	NR_131900	100506749	Hs.684184	NR_131900	ENSG00000235529	AGAP1-IT1	-	AGAP1 intronic transcript 1	ncRNA	28.16	3.88	7.257731959	1.97E-12
chr2-810	chr2	238283437	238284437	+	18.6	1000	"intron (NM_057167, intron 6 of 42)"	MLT1D|LTR|ERVL-MaLR	38913	NM_057167	1293	Hs.233240	NM_004369	ENSG00000163359	COL6A3	BTHLM1|DYT27|UCMD1	collagen type VI alpha 3 chain	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr2-811	chr2	238572403	238573403	+	18.6	1000	"intron (NM_001137550, intron 1 of 23)"	"intron (NM_001137550, intron 1 of 23)"	-27904	NM_004735	9208	Hs.471779	NM_004735	ENSG00000124831	LRRFIP1	FLAP-1|FLAP1|FLIIAP1|GCF-2|GCF2|HUFI-1|TRIP	LRR binding FLII interacting protein 1	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr2-817	chr2	877915	879578	+	30.7	1663	Intergenic	Intergenic	-14634	NR_111963	339822	Hs.651879	NR_033880	ENSG00000237667	LINC01115	-	long intergenic non-protein coding RNA 1115	ncRNA	30.72	3.4	9.035294118	1.89E-15
chr2-819	chr2	1872419	1876071	+	55.7	3652	"intron (NM_001329845, intron 18 of 24)"	"intron (NM_001329845, intron 18 of 24)"	-125926	NM_012293	7837	Hs.332197	NM_012293	ENSG00000130508	PXDN	COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO	peroxidasin	protein-coding	55.69	8.74	6.371853547	1.56E-20
chr2-820	chr2	1878946	1880243	+	18.6	1297	"intron (NM_001329845, intron 18 of 24)"	"intron (NM_001329845, intron 18 of 24)"	-131275	NM_012293	7837	Hs.332197	NM_012293	ENSG00000130508	PXDN	COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO	peroxidasin	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr2-823	chr2	2024723	2025991	+	22.4	1268	"intron (NM_001329845, intron 4 of 24)"	"intron (NM_001329845, intron 4 of 24)"	-277038	NM_012293	7837	Hs.332197	NM_012293	ENSG00000130508	PXDN	COPOA|D2S448|D2S448E|MG50|PRG2|PXN|VPO	peroxidasin	protein-coding	22.4	0.49	45.71428571	1.33E-22
chr2-830	chr2	10087308	10088308	+	18.6	1000	Intergenic	AluSx1|SINE|Alu	-3984	NM_198182	29841	Hs.418493	NM_198182	ENSG00000134317	GRHL1	LBP32|MGR|NH32|TFCP2L2	grainyhead like transcription factor 1	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr2-834	chr2	15867622	15869173	+	26.9	1551	Intergenic	Intergenic	37491	NR_110201	101926966	Hs.502835	NR_110201	ENSG00000231031	LINC01804	-	long intergenic non-protein coding RNA 1804	ncRNA	26.88	1.94	13.8556701	2.90E-17
chr2-837	chr2	16152597	16154261	+	23.7	1664	Intergenic	Intergenic	-37120	NR_126559	104797537	Hs.435748	NR_126559	ENSG00000236289	GACAT3	LINC01458|lncRNA-AC130710	gastric cancer associated transcript 3 (non-protein coding)	ncRNA	23.68	2.91	8.137457045	4.85E-11
chr2-84	chr2	175587556	175588809	+	29.4	1253	Intergenic	AluJb|SINE|Alu	-40555	NM_001077269	7456	Hs.128067	NM_003387	ENSG00000115935	WIPF1	PRPL-2|WAS2|WASPIP|WIP	WAS/WASL interacting protein family member 1	protein-coding	29.44	5.34	5.513108614	1.33E-10
chr2-840	chr2	20618454	20620480	+	34.6	2026	Intergenic	Intergenic	-27365	NM_004040	388	Hs.502876	NM_004040	ENSG00000143878	RHOB	ARH6|ARHB|MST081|MSTP081|RHOH6	ras homolog family member B	protein-coding	34.56	6.8	5.082352941	2.10E-11
chr2-841	chr2	20627386	20631416	+	56.3	4030	Intergenic	MLT1B|LTR|ERVL-MaLR	-17431	NM_004040	388	Hs.502876	NM_004040	ENSG00000143878	RHOB	ARH6|ARHB|MST081|MSTP081|RHOH6	ras homolog family member B	protein-coding	56.33	10.19	5.527968597	7.03E-19
chr2-842	chr2	23841089	23842344	+	21.1	1255	"intron (NM_052920, intron 3 of 13)"	"intron (NM_052920, intron 3 of 13)"	233418	NM_052920	114818	Hs.130593	NM_025067	ENSG00000119771	KLHL29	KBTBD9	kelch like family member 29	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr2-847	chr2	27108623	27109623	+	19.2	1000	"intron (NM_001253724, intron 1 of 12)"	"intron (NM_001253724, intron 1 of 12)"	37831	NM_001253724	56896	Hs.299315	NM_020134	ENSG00000157851	DPYSL5	CRAM|CRMP-5|CRMP5|Ulip6	dihydropyrimidinase like 5	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr2-853	chr2	42058605	42060141	+	27.5	1536	Intergenic	Intergenic	-45322	NR_033996	388942	Hs.631883	NR_033996	ENSG00000214691	LINC01913	-	long intergenic non-protein coding RNA 1913	ncRNA	27.52	6.8	4.047058824	2.13E-07
chr2-860	chr2	46037549	46038811	+	19.8	1262	"intron (NM_005400, intron 1 of 14)"	MLT1J|LTR|ERVL-MaLR	159137	NM_005400	5581	Hs.580351	NM_005400	ENSG00000171132	PRKCE	PKCE|nPKC-epsilon	protein kinase C epsilon	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr2-863	chr2	47109922	47111172	+	19.8	1250	Intergenic	Intergenic	32460	NM_139279	90411	Hs.662152	NM_139279	ENSG00000180398	MCFD2	F5F8D|F5F8D2|LMAN1IP|SDNSF	multiple coagulation factor deficiency 2	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr2-866	chr2	58654135	58655543	+	24.3	1408	Intergenic	Intergenic	-93049	NR_033873	400955	Hs.503210	NR_033873	ENSG00000233723	LINC01122	-	long intergenic non-protein coding RNA 1122	ncRNA	24.32	5.82	4.178694158	3.56E-07
chr2-867	chr2	64687758	64689310	+	24.3	1552	TTS (NM_014181)	TTS (NM_014181)	7207	NM_014181	29094	Hs.372208	NM_014181	ENSG00000119862	LGALSL	GRP|HSPC159	galectin like	protein-coding	24.32	4.37	5.565217391	4.38E-09
chr2-869	chr2	66072015	66073015	+	18.6	1000	Intergenic	Intergenic	-412859	NM_181784	200734	Hs.59332	NM_181784	ENSG00000198369	SPRED2	Spred-2	sprouty related EVH1 domain containing 2	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr2-871	chr2	70558440	70559440	+	17.9	1000	Intergenic	AluSz|SINE|Alu	-29720	NM_032822	84908	Hs.516077	NM_032822	ENSG00000035141	FAM136A	-	family with sequence similarity 136 member A	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr2-878	chr2	73301559	73302559	+	19.2	1000	"3' UTR (NM_015470, exon 5 of 5)"	"3' UTR (NM_015470, exon 5 of 5)"	-3094	NM_001330400	94097	Hs.368171	NM_144579	ENSG00000144040	SFXN5	BBG-TCC	sideroflexin 5	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr2-891	chr2	88500089	88501359	+	19.2	1270	Intergenic	LTR16A|LTR|ERVL	28066	NM_018271	55258	Hs.739080	NM_018271	ENSG00000144115	THNSL2	SOFAT|THS2|TSH2	threonine synthase like 2	protein-coding	19.2	2.43	7.901234568	1.91E-09
chr2-904	chr2	92027859	92029184	+	25	1325	Intergenic	MLT1D|LTR|ERVL-MaLR	65153	NR_003503	645367	Hs.650223	NR_003503		GGT8P	GGT1P1	gamma-glutamyltransferase 8 pseudogene	pseudo	24.96	1.46	17.09589041	3.23E-17
chr2-907	chr2	97540278	97546850	+	91.5	6572	"intron (NM_016490, intron 4 of 4)"	"intron (NM_016490, intron 4 of 4)"	-7829	NM_017789	54910	Hs.516220	NM_017789	ENSG00000168758	SEMA4C	M-SEMA-F|SEMACL1|SEMAF|SEMAI	semaphorin 4C	protein-coding	91.53	16.02	5.713483146	4.26E-30
chr2-909	chr2	97584665	97585920	+	21.1	1255	"intron (NR_110209, intron 1 of 2)"	"intron (NR_110209, intron 1 of 2)"	449	NR_110209	101927053	Hs.677537	NR_110209		LOC101927053	-	uncharacterized LOC101927053	ncRNA	21.12	4.37	4.832951945	6.64E-07
chr2-913	chr2	103269414	103270414	+	17.9	1000	"intron (NM_003048, intron 1 of 11)"	"intron (NM_003048, intron 1 of 11)"	33921	NM_003048	6549	Hs.250083	NM_003048	ENSG00000115616	SLC9A2	NHE2	solute carrier family 9 member A2	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr2-917	chr2	112654602	112660280	+	112	5678	"intron (NM_006343, intron 1 of 18)"	"intron (NM_006343, intron 1 of 18)"	1250	NM_006343	10461	Hs.306178	NM_006343	ENSG00000153208	MERTK	MER|RP38|Tyro12|c-Eyk|c-mer	"MER proto-oncogene, tyrosine kinase"	protein-coding	112.01	17.47	6.411562679	3.77E-40
chr2-920	chr2	113994931	113995931	+	18.6	1000	"intron (NM_013952, intron 7 of 11)"	"intron (NM_013952, intron 7 of 11)"	1585	NR_015377	654433	Hs.656660	NR_015377	ENSG00000189223	PAX8-AS1	-	PAX8 antisense RNA 1	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr2-921	chr2	118839185	118840185	+	19.2	1000	Intergenic	L3|LINE|CR1	-6309	NM_001321330	51141	Hs.7089	NM_016133	ENSG00000125629	INSIG2	INSIG-2	insulin induced gene 2	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr2-924	chr2	121361004	121362004	+	17.9	1000	Intergenic	L2c|LINE|L2	-137579	NR_027181	84931	Hs.334519	NM_032845	ENSG00000280409	LINC01101	-	long intergenic non-protein coding RNA 1101	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr2-928	chr2	127673332	127674332	+	17.3	1000	Intergenic	L2b|LINE|L2	17370	NR_136239	101929926	Hs.98984	NM_001322244	ENSG00000237524	LOC101929926	-	uncharacterized LOC101929926	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr2-932	chr2	128990110	128991110	+	17.3	1000	Intergenic	CpG	85561	NM_004807	9394	Hs.512841	NM_004807	ENSG00000136720	HS6ST1	HH15|HS6ST	heparan sulfate 6-O-sulfotransferase 1	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr2-938	chr2	135518688	135519688	+	17.3	1000	Intergenic	Intergenic	-42617	NM_030923	81615	Hs.369471	NM_030923	ENSG00000152128	TMEM163	DC29|SV31	transmembrane protein 163	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr2-941	chr2	145091456	145092456	+	18.6	1000	Intergenic	AT_rich|Low_complexity|Low_complexity	-1855	NM_001284234	79712	Hs.44780	NM_024659	ENSG00000121964	GTDC1	Hmat-Xa|mat-Xa	glycosyltransferase like domain containing 1	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr2-949	chr2	175204600	175209828	+	92.8	5228	Intergenic	CpG	7393	NM_001145250	100131390	Hs.516603	NM_001145250	ENSG00000217236	SP9	ZNF990	Sp9 transcription factor	protein-coding	92.81	12.13	7.651277824	3.04E-38
chr2-950	chr2	175548139	175549139	+	19.2	1000	Intergenic	LTR8|LTR|ERV1	-1012	NM_001077269	7456	Hs.128067	NM_003387	ENSG00000115935	WIPF1	PRPL-2|WAS2|WASPIP|WIP	WAS/WASL interacting protein family member 1	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr2-960	chr2	182547621	182549788	+	35.2	2167	Intergenic	CpG	-3312	NM_002500	4760	Hs.574626	NM_002500	ENSG00000162992	NEUROD1	BETA2|BHF-1|MODY6|NEUROD|bHLHa3	neuronal differentiation 1	protein-coding	35.2	4.85	7.257731959	1.02E-14
chr2-965	chr2	200679411	200680715	+	21.1	1304	"intron (NR_034096, intron 3 of 3)"	"intron (NR_034096, intron 3 of 3)"	35833	NR_034096	348751	Hs.734578	NR_034096	ENSG00000226124	FTCDNL1	FONG	formiminotransferase cyclodeaminase N-terminal like	ncRNA	21.12	3.4	6.211764706	2.41E-08
chr2-972	chr2	218417033	218418540	+	20.5	1507	"intron (NR_026597, intron 2 of 12)"	"intron (NR_026597, intron 2 of 12)"	203530	NR_026597	729582	Hs.572788	NR_026597		DIRC3	-	disrupted in renal carcinoma 3	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr2-974	chr2	218784077	218785077	+	19.2	1000	"intron (NM_001308023, intron 1 of 29)"	"intron (NM_001308023, intron 1 of 29)"	382	NM_001308023	7145	Hs.471381	NM_022648	ENSG00000079308	TNS1	MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS	tensin 1	protein-coding	19.2	0	19.77825696	2.52E-19
chr2-976	chr2	218898105	218899381	+	27.5	1276	promoter-TSS (NR_034176)	promoter-TSS (NR_034176)	-914	NR_034176	285180	Hs.570069	NM_198483	ENSG00000188282	RUFY4	ZFYVE31	RUN and FYVE domain containing 4	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr2-977	chr2	219170338	219171338	+	18.6	1000	"intron (NM_015488, intron 2 of 9)"	"intron (NM_015488, intron 2 of 9)"	-13538	NM_001321435	64114	Hs.591605	NM_022152	ENSG00000135926	TMBIM1	LFG3|MST100|MSTP100|PP1201|RECS1	transmembrane BAX inhibitor motif containing 1	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr2-983	chr2	220313327	220314588	+	19.8	1261	"exon (NM_005876, exon 4 of 41)"	"exon (NM_005876, exon 4 of 41)"	-11577	NM_001173476	10290	Hs.21639	NM_005876	ENSG00000072195	SPEG	APEG-1|APEG1|BPEG|CNM5|SPEGalpha|SPEGbeta	SPEG complex locus	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr2-984	chr2	220515477	220516874	+	24.3	1397	Intergenic	L1MD3|LINE|L1	23883	NR_048551	6508	Hs.1176	NM_005070	ENSG00000114923	SLC4A3	AE3|CAE3/BAE3|SLC2C	solute carrier family 4 member 3	protein-coding	24.32	1.46	16.65753425	3.23E-17
chr2-989	chr2	225190962	225191962	+	19.2	1000	Intergenic	Intergenic	75249	NM_024785	79843	Hs.147585	NM_024785	ENSG00000124019	FAM124B	-	family with sequence similarity 124 member B	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr2-990	chr2	225944899	225945899	+	16.6	1000	Intergenic	MER102a|DNA|hAT-Charlie	-38069	NM_014689	55619	Hs.46578	NM_014689	ENSG00000135905	DOCK10	DRIP2|Nbla10300|ZIZ3	dedicator of cytokinesis 10	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr2-991	chr2	231862676	231863676	+	18.6	1000	"intron (NM_139073, intron 1 of 4)"	"intron (NM_139073, intron 1 of 4)"	2337	NM_139073	130560	Hs.745178	NM_139073	ENSG00000173699	SPATA3	TSARG1	spermatogenesis associated 3	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr2-994	chr2	233276010	233277010	+	18.6	1000	Intergenic	AluSx1|SINE|Alu	4958	NM_031313	251	Hs.333509	NM_031313	ENSG00000163286	ALPPL2	ALPG|ALPPL|GCAP	"alkaline phosphatase, placental like 2"	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr2-996	chr2	233367789	233371558	+	59.5	3769	Intergenic	Intergenic	-15500	NM_001195129	646960	Hs.570310	NM_001195129	ENSG00000237412	PRSS56	MCOP6	"protease, serine 56"	protein-coding	59.53	8.74	6.811212815	5.39E-23
chr20-10013	chr20	40315718	40317540	+	29.4	1822	Intergenic	MER66-int|LTR|ERV1	-69496	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	29.44	5.82	5.058419244	6.85E-10
chr20-10015	chr20	40330969	40331969	+	14.7	1000	Intergenic	MLT1J|LTR|ERVL-MaLR	-84336	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr20-10029	chr20	40729769	40730769	+	14.1	1000	"intron (NM_007050, intron 26 of 30)"	"intron (NM_007050, intron 26 of 30)"	-483136	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr20-10038	chr20	41000534	41001534	+	15.4	1000	"intron (NM_007050, intron 9 of 30)"	AluSz|SINE|Alu	-313089	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr20-10048	chr20	41424985	41425985	+	14.7	1000	"intron (NM_007050, intron 2 of 30)"	"intron (NM_007050, intron 2 of 30)"	111362	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr20-10050	chr20	41474712	41475712	+	14.1	1000	"intron (NM_007050, intron 2 of 30)"	"intron (NM_007050, intron 2 of 30)"	161089	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr20-10053	chr20	41713645	41714645	+	15.4	1000	"intron (NM_007050, intron 1 of 30)"	THE1B|LTR|ERVL-MaLR	104412	NM_007050	11122	Hs.526879	NM_007050	ENSG00000196090	PTPRT	RPTPrho	"protein tyrosine phosphatase, receptor type T"	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr20-10058	chr20	41771912	41772912	+	14.7	1000	"intron (NM_007050, intron 1 of 30)"	"intron (NM_007050, intron 1 of 30)"	46145	NM_007050	11122	Hs.526879	NM_007050	ENSG00000196090	PTPRT	RPTPrho	"protein tyrosine phosphatase, receptor type T"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr20-10066	chr20	41890988	41891988	+	14.7	1000	Intergenic	Intergenic	-72931	NM_133170	11122	Hs.526879	NM_007050	ENSG00000196090	PTPRT	RPTPrho	"protein tyrosine phosphatase, receptor type T"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr20-10068	chr20	41975306	41977017	+	23	1711	Intergenic	AluY|SINE|Alu	-110343	NM_006275	6431	Hs.684950	NM_006275	ENSG00000124193	SRSF6	B52|HEL-S-91|SFRS6|SRP55	serine and arginine rich splicing factor 6	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr20-10071	chr20	42041525	42042525	+	14.7	1000	Intergenic	L1P4|LINE|L1	-44479	NM_006275	6431	Hs.684950	NM_006275	ENSG00000124193	SRSF6	B52|HEL-S-91|SFRS6|SRP55	serine and arginine rich splicing factor 6	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-10073	chr20	42064870	42065870	+	14.7	1000	Intergenic	AluSz|SINE|Alu	-21134	NM_006275	6431	Hs.684950	NM_006275	ENSG00000124193	SRSF6	B52|HEL-S-91|SFRS6|SRP55	serine and arginine rich splicing factor 6	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-10074	chr20	42194669	42195669	+	15.4	1000	"exon (NM_170693, exon 2 of 13)"	"exon (NM_170693, exon 2 of 13)"	432	NM_016276	10110	Hs.300863	NM_016276	ENSG00000101049	SGK2	H-SGK2|dJ138B7.2	"SGK2, serine/threonine kinase 2"	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr20-1008	chr20	34795411	34796661	+	24.3	1250	"intron (NM_001258330, intron 14 of 20)"	"intron (NM_001258330, intron 14 of 20)"	-28303	NM_015511	25980	Hs.11314	NM_015511	ENSG00000131043	AAR2	C20orf4|CGI-23	AAR2 splicing factor homolog	protein-coding	24.32	4.37	5.565217391	4.38E-09
chr20-10082	chr20	42466891	42467891	+	14.1	1000	Intergenic	Intergenic	-55967	NR_134577	105372626	Hs.130555	NR_134577	ENSG00000233277	LINC01728	-	long intergenic non-protein coding RNA 1728	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr20-10102	chr20	42710045	42711045	+	14.7	1000	Intergenic	Intergenic	105673	NM_175913	57158	Hs.441737	NM_020433	ENSG00000149596	JPH2	CMH17|JP-2|JP2	junctophilin 2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr20-10106	chr20	42742628	42743628	+	14.1	1000	"intron (NM_020433, intron 5 of 5)"	L2c|LINE|L2	73090	NM_175913	57158	Hs.441737	NM_020433	ENSG00000149596	JPH2	CMH17|JP-2|JP2	junctophilin 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr20-10116	chr20	42864504	42865504	+	14.7	1000	Intergenic	AluSz|SINE|Alu	-10735	NM_001256738	78997	Hs.517059	NM_024034	ENSG00000124194	GDAP1L1	dJ881L22.1|dJ995J12.1.1	ganglioside induced differentiation associated protein 1 like 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-1012	chr20	38169998	38171647	+	36.5	1649	Intergenic	MLT1E1|LTR|ERVL-MaLR	-317431	NR_027124	339568	Hs.434319	NR_027124	ENSG00000230324	LINC01734	-	long intergenic non-protein coding RNA 1734	ncRNA	36.48	8.25	4.421818182	3.05E-10
chr20-10127	chr20	43022622	43027787	+	103.7	5165	promoter-TSS (NR_109949)	promoter-TSS (NR_109949)	-858	NR_109949	101927219	Hs.655919	NR_109949	ENSG00000229005	HNF4A-AS1	uc002xlx	HNF4A antisense RNA 1	ncRNA	103.69	22.33	4.643528885	2.15E-28
chr20-10135	chr20	43098486	43099486	+	14.1	1000	Intergenic	Intergenic	-5002	NR_132342	140834	Hs.357589	NM_001287807	ENSG00000168746	LINC01620	C20orf62|dJ1013A22.3	long intergenic non-protein coding RNA 1620	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr20-10146	chr20	43223057	43224517	+	22.4	1460	"intron (NM_001281445, intron 2 of 3)"	"intron (NM_001281445, intron 2 of 3)"	12597	NM_001281445	11142	Hs.472831	NM_007066	ENSG00000168734	PKIG	PKI-gamma	cAMP-dependent protein kinase inhibitor gamma	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr20-1017	chr20	40783957	40785601	+	33.3	1644	"intron (NM_007050, intron 17 of 30)"	L2b|LINE|L2	-529344	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	33.28	4.37	7.615560641	6.77E-15
chr20-10171	chr20	43882745	43885030	+	41	2285	promoter-TSS (NM_003064)	promoter-TSS (NM_003064)	-682	NM_003064	6590	Hs.517070	NM_003064	ENSG00000124107	SLPI	ALK1|ALP|BLPI|HUSI|HUSI-I|MPI|WAP4|WFDC4	secretory leukocyte peptidase inhibitor	protein-coding	40.97	5.82	7.0395189	5.30E-17
chr20-10178	chr20	43954172	43955172	+	12.8	1000	"3' UTR (NM_002999, exon 5 of 5)"	"3' UTR (NM_002999, exon 5 of 5)"	-17503	NM_003833	8785	Hs.278489	NM_003833	ENSG00000124159	MATN4	-	matrilin 4	protein-coding	12.8	1.46	8.767123288	3.57E-07
chr20-1018	chr20	40881111	40882376	+	23.7	1265	"intron (NM_007050, intron 13 of 30)"	"intron (NM_007050, intron 13 of 30)"	-432380	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	23.68	3.88	6.103092784	4.22E-09
chr20-10180	chr20	43961041	43962041	+	14.7	1000	"intron (NM_002999, intron 3 of 4)"	"intron (NM_002999, intron 3 of 4)"	15523	NM_002999	6385	Hs.632267	NM_002999	ENSG00000124145	SDC4	SYND4	syndecan 4	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr20-10197	chr20	44215876	44218014	+	37.8	2138	Intergenic	Intergenic	-8980	NM_130896	90199	Hs.116128	NM_130896	ENSG00000158901	WFDC8	C20orf170|HEL-S-292|WAP8|dJ461P17.1	WAP four-disulfide core domain 8	protein-coding	37.76	8.25	4.576969697	6.71E-11
chr20-10213	chr20	44805741	44808859	+	55	3118	"intron (NM_021248, intron 10 of 11)"	"intron (NM_021248, intron 10 of 11)"	60407	NM_001322422	958	Hs.472860	NM_001250	ENSG00000101017	CD40	Bp50|CDW40|TNFRSF5|p50	CD40 molecule	protein-coding	55.05	9.71	5.669412976	6.93E-19
chr20-10239	chr20	45110608	45111608	+	14.1	1000	Intergenic	Intergenic	-17177	NR_026640	7686	Hs.717103	NR_026640		MKRN7P	MKRNP3|ZNF127L5|dJ981L23.2	"makorin ring finger protein 7, pseudogene"	pseudo	14.08	0.49	28.73469388	3.99E-13
chr20-10248	chr20	45273329	45274329	+	14.1	1000	"intron (NM_001193340, intron 2 of 12)"	MLT1D|LTR|ERVL-MaLR	6271	NM_001193342	64849	Hs.655498	NM_022829	ENSG00000158296	SLC13A3	NADC3|SDCT2	solute carrier family 13 member 3	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr20-10253	chr20	45368517	45369517	+	15.4	1000	Intergenic	Intergenic	30738	NM_030777	81031	Hs.305971	NM_030777	ENSG00000197496	SLC2A10	ATS|GLUT10	solute carrier family 2 member 10	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr20-10254	chr20	45380221	45381221	+	15.4	1000	Intergenic	MLT1K|LTR|ERVL-MaLR	42442	NM_030777	81031	Hs.305971	NM_030777	ENSG00000197496	SLC2A10	ATS|GLUT10	solute carrier family 2 member 10	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-10262	chr20	45516000	45517000	+	14.1	1000	Intergenic	Intergenic	-6763	NM_005244	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr20-10264	chr20	45531135	45532135	+	15.4	1000	"intron (NM_005244, intron 1 of 15)"	"intron (NM_005244, intron 1 of 15)"	8372	NM_172110	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-10269	chr20	45578979	45581328	+	32	2349	"intron (NM_005244, intron 1 of 15)"	"intron (NM_005244, intron 1 of 15)"	56890	NM_172110	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding	32	7.77	4.118404118	7.28E-09
chr20-10271	chr20	45615253	45618330	+	43.5	3077	"intron (NM_005244, intron 1 of 15)"	MER2|DNA|TcMar-Tigger	93528	NM_172110	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding	43.53	5.34	8.151685393	7.25E-20
chr20-10274	chr20	45665894	45666894	+	15.4	1000	"intron (NM_005244, intron 5 of 15)"	MLT1D|LTR|ERVL-MaLR	-129215	NR_037410	100500814		NR_037410	ENSG00000264901	MIR3616	mir-3616	microRNA 3616	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr20-1028	chr20	42924182	42925690	+	29.4	1508	Intergenic	Intergenic	14956	NM_001080472	128486	Hs.632269	NM_001080472	ENSG00000197296	FITM2	C20orf142|Fit2|dJ881L22.2	fat storage inducing transmembrane protein 2	protein-coding	29.44	5.82	5.058419244	6.85E-10
chr20-10296	chr20	46382001	46384252	+	35.2	2251	"intron (NM_198596, intron 2 of 20)"	"intron (NM_198596, intron 2 of 20)"	31682	NM_018837	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding	35.2	3.88	9.072164948	5.09E-17
chr20-10298	chr20	46394582	46396466	+	32.6	1884	"intron (NM_198596, intron 1 of 20)"	"intron (NM_198596, intron 1 of 20)"	19284	NM_018837	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding	32.64	5.82	5.608247423	2.32E-11
chr20-10310	chr20	46570410	46571681	+	16.6	1271	Intergenic	Intergenic	-40925	NR_109942	101060004	Hs.129970	NR_109942		LINC01523	-	long intergenic non-protein coding RNA 1523	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr20-10319	chr20	46886169	46887169	+	15.4	1000	Intergenic	L1MD2|LINE|L1	-101985	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr20-10328	chr20	47026549	47033299	+	92.8	6750	Intergenic	Intergenic	41270	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	92.81	17.47	5.312535776	1.27E-28
chr20-10329	chr20	47053260	47054260	+	14.1	1000	Intergenic	AluSg|SINE|Alu	65106	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr20-10332	chr20	47100462	47104837	+	73.6	4375	Intergenic	D20S16|Satellite|Satellite	113995	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	73.61	17.96	4.098552339	6.30E-18
chr20-10334	chr20	47149093	47150093	+	14.1	1000	Intergenic	L1PB4|LINE|L1	160939	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr20-10345	chr20	47338835	47340842	+	30.7	2007	"intron (NM_020820, intron 5 of 39)"	"intron (NM_020820, intron 5 of 39)"	104582	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	30.72	5.82	5.278350515	1.29E-10
chr20-10351	chr20	47380702	47382045	+	22.4	1343	"intron (NM_020820, intron 1 of 39)"	MLT1D|LTR|ERVL-MaLR	63047	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr20-10357	chr20	47442185	47448865	+	102.4	6680	Intergenic	MIR|SINE|MIR	-1105	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	102.41	19.9	5.146231156	6.52E-31
chr20-10362	chr20	47479840	47480840	+	15.4	1000	Intergenic	AluSx|SINE|Alu	-35920	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr20-10370	chr20	47993855	47994855	+	15.4	1000	"intron (NM_004975, intron 1 of 1)"	L2b|LINE|L2	97135	NR_003030	692057		NR_003030	ENSG00000212304	SNORD12	HBII-99|MIR1259|MIRN1259	"small nucleolar RNA, C/D box 12"	snoRNA	15.36	3.4	4.517647059	2.25E-05
chr20-10378	chr20	48061549	48063068	+	22.4	1519	"intron (NM_004975, intron 1 of 1)"	"intron (NM_004975, intron 1 of 1)"	36873	NM_004975	3745	Hs.84244	NM_004975	ENSG00000158445	KCNB1	DRK1|Kv2.1	potassium voltage-gated channel subfamily B member 1	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr20-1038	chr20	43729199	43730459	+	27.5	1260	promoter-TSS (NM_001322799)	promoter-TSS (NM_001322799)	-76	NM_002251	3787	Hs.117780	NM_002251	ENSG00000124134	KCNS1	Kv9.1	potassium voltage-gated channel modifier subfamily S member 1	protein-coding	27.52	5.82	4.728522337	1.71E-08
chr20-10382	chr20	48072948	48081693	+	142.7	8745	"intron (NM_004975, intron 1 of 1)"	L2a|LINE|L2	21861	NM_004975	3745	Hs.84244	NM_004975	ENSG00000158445	KCNB1	DRK1|Kv2.1	potassium voltage-gated channel subfamily B member 1	protein-coding	142.74	28.15	5.070692718	1.94E-41
chr20-10395	chr20	48386620	48388184	+	25.6	1564	Intergenic	Intergenic	-41848	NR_048538	23315	Hs.444202	NM_015266	ENSG00000197818	SLC9A8	NHE-8|NHE8	solute carrier family 9 member A8	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr20-10404	chr20	48671551	48672551	+	14.7	1000	Intergenic	Intergenic	-13885	NR_051976	100887755	Hs.195705	NR_051976		TRERNA1	LINC00651|treRNA	translation regulatory long non-coding RNA 1	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr20-10416	chr20	49011351	49012351	+	13.4	1000	Intergenic	Intergenic	-73972	NR_109950	101927586	Hs.637665	NR_109950	ENSG00000233077	LINC01271	-	long intergenic non-protein coding RNA 1271	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr20-10423	chr20	49293315	49294315	+	16.6	1000	"intron (NM_001290268, intron 1 of 21)"	MIR|SINE|MIR	14252	NR_110890	140876	Hs.372578	NM_080829	ENSG00000042062	FAM65C	C20orf175|C20orf176	family with sequence similarity 65 member C	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-10425	chr20	49319007	49320007	+	14.1	1000	Intergenic	Intergenic	-11440	NM_001290268	140876	Hs.372578	NM_080829	ENSG00000042062	FAM65C	C20orf175|C20orf176	family with sequence similarity 65 member C	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr20-10434	chr20	49436735	49438280	+	26.9	1545	"intron (NM_001010974, intron 2 of 3)"	Charlie8|DNA|hAT-Charlie	26076	NM_001010974	55653	Hs.381178	NM_017843	ENSG00000124243	BCAS4	CNOL	breast carcinoma amplified sequence 4	protein-coding	26.88	3.4	7.905882353	1.25E-12
chr20-10435	chr20	49476108	49477108	+	14.7	1000	"intron (NM_198799, intron 4 of 4)"	AluJo|SINE|Alu	49720	NM_001282532	23394	Hs.293736	NM_015339	ENSG00000101126	ADNP	ADNP1|HVDAS|MRD28	activity dependent neuroprotector homeobox	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-10447	chr20	49760909	49761909	+	15.4	1000	Intergenic	L1ME3A|LINE|L1	-121734	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-10457	chr20	49866805	49867805	+	14.7	1000	Intergenic	AluJo|SINE|Alu	202209	NR_036162	100422889		NR_036162	ENSG00000266761	MIR3194	mir-3194	microRNA 3194	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr20-10459	chr20	49874028	49875028	+	12.8	1000	Intergenic	MER50B|LTR|ERV1	194986	NR_036162	100422889		NR_036162	ENSG00000266761	MIR3194	mir-3194	microRNA 3194	ncRNA	12.8	1.94	6.597938144	4.51E-06
chr20-10461	chr20	49894328	49895328	+	15.4	1000	Intergenic	L2c|LINE|L2	174686	NR_036162	100422889		NR_036162	ENSG00000266761	MIR3194	mir-3194	microRNA 3194	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr20-10469	chr20	50289643	50290643	+	15.4	1000	"intron (NM_006045, intron 11 of 27)"	MER117|DNA|hAT-Charlie	94807	NM_006045	10079	Hs.649234	NM_006045	ENSG00000054793	ATP9A	ATPIIA	ATPase phospholipid transporting 9A (putative)	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-10472	chr20	50388578	50391389	+	42.2	2811	Intergenic	Intergenic	-5033	NM_006045	10079	Hs.649234	NM_006045	ENSG00000054793	ATP9A	ATPIIA	ATPase phospholipid transporting 9A (putative)	protein-coding	42.25	6.8	6.213235294	5.66E-16
chr20-10481	chr20	50510166	50511504	+	20.5	1338	Intergenic	Intergenic	-31383	NR_110016	101927678	Hs.683840	NR_110016	ENSG00000227964	LINC01429	-	long intergenic non-protein coding RNA 1429	ncRNA	20.48	1.94	10.55670103	9.02E-12
chr20-10493	chr20	51317410	51318410	+	15.4	1000	Intergenic	MER5A1|DNA|hAT-Charlie	80533	NR_110038	101927700	Hs.434465	NR_110038	ENSG00000234948	LINC01524	-	long intergenic non-protein coding RNA 1524	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr20-10501	chr20	51550482	51551482	+	15.4	1000	Intergenic	Intergenic	-37964	NM_173485	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-10503	chr20	51589064	51591824	+	40.3	2760	"intron (NM_173485, intron 1 of 2)"	"intron (NM_173485, intron 1 of 2)"	1498	NM_173485	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	40.33	8.74	4.614416476	1.21E-11
chr20-10518	chr20	51811169	51812169	+	14.7	1000	"intron (NM_001193421, intron 1 of 2)"	"intron (NM_001193421, intron 1 of 2)"	9847	NM_001193421	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr20-10525	chr20	51866997	51867997	+	14.7	1000	"intron (NM_001193421, intron 1 of 2)"	"intron (NM_001193421, intron 1 of 2)"	65675	NM_001193421	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-10537	chr20	52097732	52098732	+	14.7	1000	"intron (NM_001193421, intron 2 of 2)"	"intron (NM_001193421, intron 2 of 2)"	-71077	NR_110051	101927770		NR_110051		LOC101927770	-	uncharacterized LOC101927770	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr20-10539	chr20	52160381	52161381	+	14.7	1000	Intergenic	Intergenic	-8428	NR_110051	101927770		NR_110051		LOC101927770	-	uncharacterized LOC101927770	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr20-1055	chr20	45372281	45375213	+	49.9	2932	Intergenic	Intergenic	35468	NM_030777	81031	Hs.305971	NM_030777	ENSG00000197496	SLC2A10	ATS|GLUT10	solute carrier family 2 member 10	protein-coding	49.93	10.68	4.675093633	1.25E-14
chr20-10554	chr20	52728257	52729257	+	14.7	1000	Intergenic	Intergenic	-41453	NM_001316361	8537	Hs.400556	NM_003657	ENSG00000064787	BCAS1	AIBC1|NABC1	breast carcinoma amplified sequence 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr20-10579	chr20	54734626	54735626	+	14.7	1000	Intergenic	Intergenic	-88662	NM_019888	4159	Hs.248018	NM_019888	ENSG00000124089	MC3R	BMIQ9|MC3|MC3-R|OB20|OQTL	melanocortin 3 receptor	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr20-10584	chr20	54900438	54901438	+	14.7	1000	Intergenic	MER115|DNA|hAT-Tip100	-33045	NM_080821	116151	Hs.143736	NM_080821	ENSG00000124098	FAM210B	5A3|C20orf108|dJ1167H4.1	family with sequence similarity 210 member B	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-10585	chr20	55031094	55032094	+	14.7	1000	"intron (NM_020356, intron 5 of 5)"	AluSx1|SINE|Alu	-12047	NM_001283036	51507	Hs.517134	NM_016407	ENSG00000022277	RTFDC1	C20orf43|CDAO5|HSPC164|SHUJUN-3	replication termination factor 2 domain containing 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr20-10587	chr20	55134396	55135396	+	14.1	1000	Intergenic	AluSx|SINE|Alu	-17723	NR_136537	105372682	Hs.517135	NR_136537	ENSG00000225657	LINC01716	-	long intergenic non-protein coding RNA 1716	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr20-10588	chr20	55149636	55150636	+	15.4	1000	Intergenic	L2c|LINE|L2	-2483	NR_136537	105372682	Hs.517135	NR_136537	ENSG00000225657	LINC01716	-	long intergenic non-protein coding RNA 1716	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr20-10589	chr20	55175434	55176800	+	21.1	1366	Intergenic	Intergenic	23498	NR_136537	105372682	Hs.517135	NR_136537	ENSG00000225657	LINC01716	-	long intergenic non-protein coding RNA 1716	ncRNA	21.12	0.97	21.77319588	2.68E-16
chr20-10593	chr20	55235822	55238288	+	32.6	2466	Intergenic	AluSg7|SINE|Alu	32697	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	32.64	4.37	7.469107551	5.18E-14
chr20-10597	chr20	55268675	55270888	+	32.6	2213	Intergenic	Intergenic	65423	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	32.64	5.82	5.608247423	2.32E-11
chr20-10602	chr20	55301384	55302384	+	15.4	1000	Intergenic	AluSx1|SINE|Alu	97526	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-10608	chr20	55472369	55473369	+	14.1	1000	Intergenic	Intergenic	268511	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr20-10610	chr20	55475242	55476953	+	26.9	1711	Intergenic	L2a|LINE|L2	271739	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	26.88	5.82	4.618556701	1.71E-08
chr20-10613	chr20	55504623	55505623	+	15.4	1000	Intergenic	Intergenic	-283629	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr20-1063	chr20	46823399	46824922	+	29.4	1523	Intergenic	Intergenic	-164494	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	29.44	4.85	6.070103093	2.13E-11
chr20-10666	chr20	56332454	56333454	+	14.7	1000	Intergenic	Intergenic	-46362	NM_199171	56937	Hs.517155	NM_020182	ENSG00000124225	PMEPA1	STAG1|TMEPAI	"prostate transmembrane protein, androgen induced 1"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-10669	chr20	56351850	56352850	+	15.4	1000	Intergenic	L1MA7|LINE|L1	-65758	NM_199171	56937	Hs.517155	NM_020182	ENSG00000124225	PMEPA1	STAG1|TMEPAI	"prostate transmembrane protein, androgen induced 1"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-1067	chr20	47158136	47159649	+	30.7	1513	Intergenic	L2a|LINE|L2	170238	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	30.72	4.85	6.334020619	3.34E-12
chr20-10675	chr20	56470042	56471928	+	32.6	1886	TTS (NR_039757)	TTS (NR_039757)	535	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	32.64	6.31	5.17274168	1.20E-10
chr20-10679	chr20	56505789	56506789	+	14.7	1000	Intergenic	Intergenic	35839	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr20-10691	chr20	56631127	56632127	+	14.1	1000	Intergenic	Intergenic	-94356	NM_178456	128602	Hs.43977	NM_178456	ENSG00000124237	C20orf85	LLC1|bA196N14.1	chromosome 20 open reading frame 85	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr20-10701	chr20	56760342	56761342	+	14.1	1000	Intergenic	(TG)n|Simple_repeat|Simple_repeat	34859	NM_178456	128602	Hs.43977	NM_178456	ENSG00000124237	C20orf85	LLC1|bA196N14.1	chromosome 20 open reading frame 85	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr20-10704	chr20	56816567	56817567	+	15.4	1000	"intron (NR_003505, intron 10 of 16)"	"intron (NR_003505, intron 10 of 16)"	-13358	NM_001304369	140731	Hs.266571	NM_080674	ENSG00000124227	ANKRD60	C20orf86|bA196N14.3	ankyrin repeat domain 60	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr20-10708	chr20	57099753	57101420	+	28.2	1667	"intron (NR_034147, intron 5 of 6)"	"intron (NR_034147, intron 5 of 6)"	10151	NR_034147	149773	Hs.685214	NR_034147	ENSG00000231290	APCDD1L-AS1	-	APCDD1L antisense RNA 1 (head to head)	ncRNA	28.16	3.88	7.257731959	1.97E-12
chr20-1071	chr20	48191934	48194630	+	50.6	2696	Intergenic	L1M7|LINE|L1	-8575	NM_000961	5740	Hs.302085	NM_000961	ENSG00000124212	PTGIS	CYP8|CYP8A1|PGIS|PTGI	prostaglandin I2 synthase	protein-coding	50.57	9.71	5.208032956	6.34E-16
chr20-10720	chr20	57297427	57299227	+	28.2	1800	Intergenic	L1MD3|LINE|L1	30465	NM_024663	79716	Hs.654868	NM_024663	ENSG00000215440	NPEPL1	bA261P9.2	aminopeptidase-like 1	protein-coding	28.16	5.82	4.838487973	3.50E-09
chr20-10724	chr20	57316209	57317710	+	21.1	1501	Intergenic	CT-rich|Low_complexity|Low_complexity	-31522	NR_134566	105372695	Hs.128204	NR_134566		LOC105372695	-	uncharacterized LOC105372695	ncRNA	21.12	3.88	5.443298969	1.44E-07
chr20-10750	chr20	57842447	57844502	+	36.5	2055	Intergenic	Intergenic	-32008	NM_001302455	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	36.48	5.82	6.268041237	1.09E-13
chr20-10754	chr20	57867864	57869181	+	16.6	1317	Intergenic	Intergenic	-6960	NM_001302455	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr20-10762	chr20	57918989	57921624	+	35.2	2635	Intergenic	Intergenic	44824	NM_207032	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	35.2	7.77	4.53024453	3.74E-10
chr20-10770	chr20	57981537	57983051	+	23	1514	Intergenic	Intergenic	106812	NM_207032	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr20-10774	chr20	58012509	58014977	+	34.6	2468	Intergenic	Intergenic	138261	NM_207032	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	34.56	6.31	5.477020602	4.08E-12
chr20-10778	chr20	58054044	58055044	+	14.7	1000	Intergenic	Tigger3a|DNA|TcMar-Tigger	-98020	NM_001199505	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-10781	chr20	58117965	58119311	+	19.2	1346	Intergenic	LTR54B|LTR|ERV1	-33926	NM_001199505	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr20-10799	chr20	58215925	58221575	+	99.2	5650	"intron (NM_001281507, intron 1 of 12)"	"intron (NM_001281507, intron 1 of 12)"	15086	NM_001281507	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	99.21	22.33	4.442901926	9.43E-26
chr20-10813	chr20	58375326	58376326	+	14.1	1000	"intron (NM_001199505, intron 7 of 12)"	L1MEc|LINE|L1	79561	NM_183244	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr20-10820	chr20	58550718	58552778	+	32	2060	"intron (NM_177980, intron 4 of 17)"	"intron (NM_177980, intron 4 of 17)"	18277	NM_177980	60437	Hs.729046	NM_021810	ENSG00000124215	CDH26	VR20	cadherin 26	protein-coding	32	4.37	7.322654462	5.18E-14
chr20-10830	chr20	59204197	59205197	+	14.1	1000	Intergenic	AluJb|SINE|Alu	65077	NR_039653	100616440		NR_039653	ENSG00000265617	MIR548AG2	-	microRNA 548ag-2	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr20-10846	chr20	59353784	59355047	+	18.6	1263	Intergenic	Intergenic	214795	NR_039653	100616440		NR_039653	ENSG00000265617	MIR548AG2	-	microRNA 548ag-2	ncRNA	18.56	3.4	5.458823529	8.42E-07
chr20-1085	chr20	50420423	50422066	+	32	1643	Intergenic	Intergenic	-2182	NM_001318031	57167	Hs.517113	NM_020436	ENSG00000101115	SALL4	DRRS|HSAL4|ZNF797	spalt like transcription factor 4	protein-coding	32	5.82	5.498281787	2.32E-11
chr20-10871	chr20	59699877	59700877	+	14.7	1000	Intergenic	Intergenic	46257	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr20-10879	chr20	59765026	59766026	+	15.4	1000	Intergenic	Intergenic	-61956	NM_001794	1002	Hs.473231	NM_001794	ENSG00000179242	CDH4	CAD4|R-CAD|RCAD	cadherin 4	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr20-10887	chr20	59806768	59807768	+	14.7	1000	Intergenic	MLT1A|LTR|ERVL-MaLR	-20214	NM_001794	1002	Hs.473231	NM_001794	ENSG00000179242	CDH4	CAD4|R-CAD|RCAD	cadherin 4	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr20-10888	chr20	59816719	59820633	+	48	3914	Intergenic	L1MC2|LINE|L1	-8806	NM_001794	1002	Hs.473231	NM_001794	ENSG00000179242	CDH4	CAD4|R-CAD|RCAD	cadherin 4	protein-coding	48.01	11.16	4.301971326	9.69E-13
chr20-1089	chr20	52913321	52914576	+	23.7	1255	Intergenic	Intergenic	89446	NM_002623	5203	Hs.91161	NM_002623	ENSG00000101132	PFDN4	C1|PFD4	prefoldin subunit 4	protein-coding	23.68	4.37	5.418764302	2.46E-08
chr20-10895	chr20	59920874	59921874	+	16	1000	"intron (NM_001794, intron 2 of 15)"	L2|LINE|L2	93892	NM_001794	1002	Hs.473231	NM_001794	ENSG00000179242	CDH4	CAD4|R-CAD|RCAD	cadherin 4	protein-coding	16	3.4	4.705882353	2.25E-05
chr20-10907	chr20	60915309	60916309	+	14.7	1000	"intron (NM_005560, intron 11 of 79)"	"intron (NM_005560, intron 11 of 79)"	-8196	NR_039915	100616340		NR_039915	ENSG00000130702	MIR4758	-	microRNA 4758	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr20-10916	chr20	61145023	61160646	+	344.4	15623	"intron (NM_178463, intron 2 of 3)"	"intron (NM_178463, intron 2 of 3)"	1321	NR_029780	406904		NR_029780	ENSG00000199017	MIR1-1	MIRN1-1|hsa-mir-1-1|miRNA1-1|mir-1-1	microRNA 1-1	ncRNA	344.36	48.54	7.094355171	8.11E-131
chr20-10924	chr20	61338210	61345393	+	133.8	7183	"intron (NM_002531, intron 1 of 3)"	MIRb|SINE|MIR	1612	NM_002531	4923	Hs.590869	NM_002531	ENSG00000101188	NTSR1	NTR	neurotensin receptor 1	protein-coding	133.78	26.21	5.104158718	3.59E-39
chr20-10934	chr20	61812071	61813919	+	26.9	1848	Intergenic	Intergenic	3143	NR_029670	406909		NR_029670	ENSG00000207598	MIR124-3	MIRN124-3|MIRN124A3|mir-124-3	microRNA 124-3	ncRNA	26.88	2.91	9.237113402	7.03E-14
chr20-10938	chr20	61870532	61879165	+	181.1	8633	"intron (NM_152864, intron 5 of 6)"	"intron (NM_152864, intron 5 of 6)"	4717	NR_036163	100423014		NR_036163	ENSG00000266463	MIR3196	mir-3196	microRNA 3196	ncRNA	181.14	32.04	5.653558052	1.28E-57
chr20-10954	chr20	62093832	62095492	+	33.3	1660	"intron (NM_172107, intron 1 of 16)"	"intron (NM_172107, intron 1 of 16)"	9368	NM_004518	3785	Hs.161851	NM_004518	ENSG00000075043	KCNQ2	BFNC|EBN|EBN1|ENB1|HNSPC|KCNA11|KV7.2	potassium voltage-gated channel subfamily Q member 2	protein-coding	33.28	8.25	4.033939394	5.66E-09
chr20-10957	chr20	62140066	62141511	+	18.6	1445	Intergenic	L1MB7|LINE|L1	-10120	NM_001958	1917	Hs.433839	NM_001958	ENSG00000101210	EEF1A2	EEF1AL|EF-1-alpha-2|EF1A|EIEE33|HS1|MRD38|STN|STNL	eukaryotic translation elongation factor 1 alpha 2	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr20-10969	chr20	62825026	62826026	+	14.7	1000	"intron (NM_004535, intron 2 of 22)"	"intron (NM_004535, intron 2 of 22)"	29699	NM_004535	4661	Hs.279562	NM_004535	ENSG00000196132	MYT1	C20orf36|MTF1|MYTI|NZF2|PLPB1|ZC2H2C1|ZC2HC4A	myelin transcription factor 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr20-1100	chr20	56225420	56231383	+	98.6	5963	"intron (NM_020182, intron 2 of 3)"	"intron (NM_020182, intron 2 of 3)"	-32769	NM_001160418	81030	Hs.302123	NM_030776	ENSG00000124256	ZBP1	C20orf183|DAI|DLM-1|DLM1	Z-DNA binding protein 1	protein-coding	98.57	18.93	5.207078711	3.87E-30
chr20-1107	chr20	56467204	56468502	+	26.9	1298	Intergenic	Intergenic	-2597	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	26.88	4.37	6.151029748	1.19E-10
chr20-1108	chr20	56566927	56569335	+	49.3	2408	Intergenic	Intergenic	97681	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	49.29	5.82	8.469072165	2.31E-22
chr20-111	chr20	35910077	35912831	+	54.4	2754	Intergenic	Intergenic	-6597	NM_001003897	63905	Hs.6126	NM_022077	ENSG00000101363	MANBAL	-	mannosidase beta like	protein-coding	54.41	12.62	4.31141046	2.65E-14
chr20-1116	chr20	57838200	57839200	+	22.4	1000	Intergenic	Intergenic	-36782	NM_001302455	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr20-1128	chr20	59439094	59440094	+	22.4	1000	Intergenic	LTR75|LTR|ERVL	-214526	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	22.4	2.91	7.697594502	3.87E-10
chr20-1130	chr20	59841817	59843772	+	40.3	1955	"intron (NM_001794, intron 2 of 15)"	"intron (NM_001794, intron 2 of 15)"	15312	NM_001794	1002	Hs.473231	NM_001794	ENSG00000179242	CDH4	CAD4|R-CAD|RCAD	cadherin 4	protein-coding	40.33	8.25	4.888484848	2.95E-12
chr20-1138	chr20	61192497	61195503	+	49.9	3006	Intergenic	Intergenic	31881	NR_029676	406923		NR_029676	ENSG00000174407	MIR133A2	MIRN133A2|mir-133a-2	microRNA 133a-2	ncRNA	49.93	9.71	5.142121524	6.34E-16
chr20-1153	chr20	62681202	62686203	+	94.7	5001	Intergenic	Intergenic	-2723	NM_018419	54345	Hs.8619	NM_018419	ENSG00000203883	SOX18	HLTRS|HLTS	SRY-box 18	protein-coding	94.73	16.02	5.913233458	2.13E-32
chr20-1157	chr20	530547	531547	+	21.8	1000	Intergenic	MIR|SINE|MIR	-6565	NM_001895	1457	Hs.644056	NM_001895	ENSG00000101266	CSNK2A1	CK2A1|CKII|CSNK2A3|OCNDS	casein kinase 2 alpha 1	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr20-1163	chr20	1244983	1249592	+	93.5	4609	"intron (NM_001318234, intron 1 of 6)"	CpG	352	NM_014723	9751	Hs.323833	NM_014723	ENSG00000101298	SNPH	-	syntaphilin	protein-coding	93.45	18.93	4.936608558	2.66E-27
chr20-1171	chr20	1965292	1966292	+	21.1	1000	"intron (NM_001190899, intron 1 of 2)"	"intron (NM_001190899, intron 1 of 2)"	7660	NM_001190892	5173	Hs.22584	NM_024411	ENSG00000101327	PDYN	ADCA|PENKB|SCA23	prodynorphin	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr20-1187	chr20	3228118	3230745	+	69.1	2627	TTS (NM_001009984)	TTS (NM_001009984)	-9544	NM_001174089	83959	Hs.105607	NM_032034	ENSG00000088836	SLC4A11	BTR1|CDPD1|CHED|CHED2|NABC1|dJ794I6.2	solute carrier family 4 member 11	protein-coding	69.13	9.71	7.11946447	8.31E-28
chr20-1203	chr20	16670521	16671521	+	22.4	1000	Intergenic	Intergenic	-39588	NM_003092	6629	Hs.280378	NM_003092	ENSG00000125870	SNRPB2	Msl1|U2B''	small nuclear ribonucleoprotein polypeptide B2	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr20-1207	chr20	17702854	17704357	+	25	1503	"intron (NM_178477, intron 2 of 3)"	"intron (NM_178477, intron 2 of 3)"	23012	NM_001014977	140836	Hs.115366	NM_178477	ENSG00000125888	BANF2	BAF-L|BAF2|BAFL|C20orf179	barrier to autointegration factor 2	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr20-1208	chr20	17815842	17817407	+	29.4	1565	Intergenic	Intergenic	126965	NR_003045	692086	Hs.680747	NR_003045	ENSG00000212232	SNORD17	HBI-43	"small nucleolar RNA, C/D box 17"	snoRNA	29.44	1.94	15.17525773	1.31E-19
chr20-121	chr20	61636693	61638753	+	51.2	2060	"exon (NM_080606, exon 1 of 1)"	"exon (NM_080606, exon 1 of 1)"	664	NM_080606	128408	Hs.551230	NM_080606	ENSG00000125533	BHLHE23	BETA4|BHLHB4|Beta3b|bA305P22.3	basic helix-loop-helix family member e23	protein-coding	51.21	8.74	5.859267735	3.69E-18
chr20-1211	chr20	18213481	18214481	+	19.8	1000	Intergenic	L1MB3|LINE|L1	-54946	NM_001282996	7692	Hs.472221	NM_003434	ENSG00000125846	ZNF133	ZNF150|pHZ-13|pHZ-66	zinc finger protein 133	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr20-1221	chr20	22942402	22944917	+	46.1	2515	Intergenic	Intergenic	-72398	NM_001052	6754	Hs.673846	NM_001052	ENSG00000132671	SSTR4	SS-4-R|SS4-R|SS4R	somatostatin receptor 4	protein-coding	46.09	10.19	4.523061825	3.26E-13
chr20-1225	chr20	24347818	24348818	+	21.8	1000	Intergenic	Intergenic	-101517	NM_024893	79953	Hs.124638	NM_024893	ENSG00000101463	SYNDIG1	C20orf39|DSPC2|IFITMD5|TMEM90B	synapse differentiation inducing 1	protein-coding	21.76	4.37	4.979405034	1.32E-07
chr20-1235	chr20	31718386	31719662	+	26.2	1276	Intergenic	MLT1B|LTR|ERVL-MaLR	-30630	NM_001319164	140683	Hs.125960	NM_080574	ENSG00000131050	BPIFA2	C20orf70|PSP|SPLUNC2|bA49G10.1	BPI fold containing family A member 2	protein-coding	26.24	6.31	4.158478605	2.77E-07
chr20-1239	chr20	34567208	34569015	+	33.9	1807	"intron (NR_130714, intron 3 of 8)"	"intron (NR_130714, intron 3 of 8)"	11608	NM_001207076	140894	Hs.732697	NM_080834	ENSG00000149646	CNBD2	C20orf152|CNMPD1	cyclic nucleotide binding domain containing 2	protein-coding	33.92	6.8	4.988235294	1.08E-10
chr20-1243	chr20	34815392	34816392	+	22.4	1000	"intron (NM_012156, intron 21 of 21)"	"intron (NM_012156, intron 21 of 21)"	-8447	NM_015511	25980	Hs.11314	NM_015511	ENSG00000131043	AAR2	C20orf4|CGI-23	AAR2 splicing factor homolog	protein-coding	22.4	5.34	4.194756554	1.97E-06
chr20-1275	chr20	44967432	44971034	+	51.2	3602	Intergenic	L2c|LINE|L2	23864	NM_015945	51006	Hs.593344	NM_015945	ENSG00000080189	SLC35C2	BA394O2.1|C20orf5|CGI-15|OVCOV1	solute carrier family 35 member C2	protein-coding	51.21	10.68	4.79494382	2.59E-15
chr20-1276	chr20	45088919	45090523	+	29.4	1604	Intergenic	Intergenic	-3439	NR_045983	100130934	Hs.712133	NM_173643		ZNF663P	ZNF663	"zinc finger protein 663, pseudogene"	pseudo	29.44	6.31	4.665610143	3.01E-09
chr20-1277	chr20	45164985	45168156	+	58.2	3171	Intergenic	MIRc|SINE|MIR	12643	NM_080721	128506	Hs.526636	NM_080721	ENSG00000149635	OCSTAMP	C20orf123|OC-STAMP|dJ257E24.3	osteoclast stimulatory transmembrane protein	protein-coding	58.25	11.65	5	1.67E-17
chr20-1289	chr20	48415018	48416018	+	22.4	1000	Intergenic	MLT1K|LTR|ERVL-MaLR	-13732	NR_048538	23315	Hs.444202	NM_015266	ENSG00000197818	SLC9A8	NHE-8|NHE8	solute carrier family 9 member A8	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr20-1290	chr20	48930238	48931238	+	23.7	1000	"non-coding (NR_109950, exon 2 of 3)"	"non-coding (NR_109950, exon 2 of 3)"	7141	NR_109950	101927586	Hs.637665	NR_109950	ENSG00000233077	LINC01271	-	long intergenic non-protein coding RNA 1271	ncRNA	23.68	5.34	4.434456929	4.49E-07
chr20-1295	chr20	50195473	50197944	+	51.2	2471	Intergenic	AluSz|SINE|Alu	-17338	NM_001258294	4773	Hs.744148	NM_012340	ENSG00000101096	NFATC2	NFAT1|NFATP	nuclear factor of activated T-cells 2	protein-coding	51.21	9.22	5.554229935	2.22E-17
chr20-1303	chr20	52883381	52884381	+	22.4	1000	Intergenic	Intergenic	59379	NM_002623	5203	Hs.91161	NM_002623	ENSG00000101132	PFDN4	C1|PFD4	prefoldin subunit 4	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr20-131	chr20	34678697	34682536	+	110.7	3839	promoter-TSS (NM_177996)	promoter-TSS (NM_177996)	-16	NM_001258330	2036	Hs.437422	NM_012156	ENSG00000088367	EPB41L1	4.1N|MRD11	erythrocyte membrane protein band 4.1 like 1	protein-coding	110.73	12.62	8.774167987	7.12E-50
chr20-1321	chr20	56114522	56116367	+	43.5	1845	Intergenic	Intergenic	-14736	NM_001269046	140690	Hs.131543	NM_080618	ENSG00000124092	CTCFL	BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2	CCCTC-binding factor like	protein-coding	43.53	8.25	5.276363636	2.15E-14
chr20-1327	chr20	56205384	56206940	+	32.6	1556	Intergenic	L1ME4a|LINE|L1	-10530	NM_001160418	81030	Hs.302123	NM_030776	ENSG00000124256	ZBP1	C20orf183|DAI|DLM-1|DLM1	Z-DNA binding protein 1	protein-coding	32.64	6.8	4.8	5.32E-10
chr20-1335	chr20	57133119	57134429	+	25	1310	"intron (NR_034147, intron 6 of 6)"	"intron (NR_034147, intron 6 of 6)"	43339	NR_034147	149773	Hs.685214	NR_034147	ENSG00000231290	APCDD1L-AS1	-	APCDD1L antisense RNA 1 (head to head)	ncRNA	24.96	5.34	4.674157303	9.72E-08
chr20-1367	chr20	59422653	59424248	+	30.7	1595	Intergenic	Intergenic	-230670	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	30.72	6.8	4.517647059	2.53E-09
chr20-1381	chr20	61035002	61038086	+	60.8	3084	Intergenic	Intergenic	14482	NM_080473	140628	Hs.352250	NM_080473	ENSG00000130700	GATA5	GATAS|bB379O24.1	GATA binding protein 5	protein-coding	60.81	13.11	4.638443936	5.29E-17
chr20-1384	chr20	61052414	61053788	+	30.1	1374	Intergenic	Intergenic	-2075	NM_080473	140628	Hs.352250	NM_080473	ENSG00000130700	GATA5	GATAS|bB379O24.1	GATA binding protein 5	protein-coding	30.08	4.37	6.883295195	2.70E-12
chr20-1398	chr20	61978061	61979743	+	30.7	1682	"intron (NM_000744, intron 5 of 5)"	"intron (NM_000744, intron 5 of 5)"	-12438	NR_110634	100130587	Hs.640129	NR_110634	ENSG00000203900	LOC100130587	-	uncharacterized LOC100130587	ncRNA	30.72	5.82	5.278350515	1.29E-10
chr20-1404	chr20	62107527	62109858	+	45.4	2331	Intergenic	Intergenic	-4662	NM_172108	3785	Hs.161851	NM_004518	ENSG00000075043	KCNQ2	BFNC|EBN|EBN1|ENB1|HNSPC|KCNA11|KV7.2	potassium voltage-gated channel subfamily Q member 2	protein-coding	45.45	6.31	7.202852615	1.43E-18
chr20-1408	chr20	168134	169134	+	21.8	1000	"exon (NM_001037732, exon 2 of 2)"	"exon (NM_001037732, exon 2 of 2)"	1688	NM_001037732	245939	Hs.516818	NM_001037732	ENSG00000185982	DEFB128	DEFB-28|DEFB28|hBD-28	defensin beta 128	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr20-1425	chr20	2330352	2331352	+	20.5	1000	Intergenic	L2c|LINE|L2	-30702	NM_198994	343641	Hs.452039	NM_198994	ENSG00000166948	TGM6	SCA35|TG6|TGM3L|TGY|dJ734P14.3	transglutaminase 6	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr20-1448	chr20	9487798	9489861	+	42.9	2063	"intron (NR_109957, intron 2 of 4)"	"intron (NR_109957, intron 2 of 4)"	-6176	NM_001199897	24141	Hs.22920	NM_012261	ENSG00000125869	LAMP5	BAD-LAMP|BADLAMP|C20orf103|LAMP-5|UNC-46	lysosomal associated membrane protein family member 5	protein-coding	42.89	7.77	5.51994852	2.23E-14
chr20-1452	chr20	10717910	10722781	+	74.2	4871	Intergenic	Intergenic	-13393	NR_110611	101929395	Hs.244862	NR_110611	ENSG00000224961	LINC01752	-	long intergenic non-protein coding RNA 1752	ncRNA	74.25	15.53	4.781068899	2.13E-21
chr20-1467	chr20	19638356	19639606	+	24.3	1250	"intron (NM_020689, intron 7 of 16)"	"intron (NM_020689, intron 7 of 16)"	-228184	NM_001242581	54453	Hs.472270	NM_018993	ENSG00000132669	RIN2	MACS|RASSF4	Ras and Rab interactor 2	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr20-1470	chr20	20238275	20239588	+	25.6	1313	"intron (NM_015585, intron 20 of 26)"	"intron (NM_015585, intron 20 of 26)"	-109834	NM_002196	3642	Hs.89584	NM_002196	ENSG00000173404	INSM1	IA-1|IA1	INSM transcriptional repressor 1	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr20-1483	chr20	23051244	23052514	+	23	1270	Intergenic	L1ME2|LINE|L1	15098	NM_012072	22918	Hs.97199	NM_012072	ENSG00000125810	CD93	C1QR1|C1qR(P)|C1qRP|CDw93|ECSM3|MXRA4|dJ737E23.1	CD93 molecule	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr20-1484	chr20	23217170	23218170	+	21.8	1000	Intergenic	Intergenic	-104397	NR_034149	200261	Hs.352228	NM_182535	ENSG00000233746	LINC00656	-	long intergenic non-protein coding RNA 656	ncRNA	21.76	3.4	6.4	3.73E-09
chr20-1486	chr20	23982326	23983326	+	21.1	1000	Intergenic	MLT1H|LTR|ERVL-MaLR	-13410	NM_178311	92086	Hs.355394	NM_080920	ENSG00000149435	GGTLC1	GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2	gamma-glutamyltransferase light chain 1	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr20-1488	chr20	24775299	24776900	+	32	1601	Intergenic	Intergenic	-153767	NM_003650	8530	Hs.143212	NM_003650	ENSG00000077984	CST7	CMAP	cystatin F	protein-coding	32	5.82	5.498281787	2.32E-11
chr20-1496	chr20	24889873	24890873	+	19.8	1000	Intergenic	Intergenic	-39493	NM_003650	8530	Hs.143212	NM_003650	ENSG00000077984	CST7	CMAP	cystatin F	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr20-1499	chr20	30428848	30431516	+	44.8	2668	Intergenic	Intergenic	3238	NM_004118	2307	Hs.516971	NM_004118	ENSG00000179772	FOXS1	FKHL18|FREAC10	forkhead box S1	protein-coding	44.81	10.19	4.397448479	1.49E-12
chr20-1517	chr20	36275010	36276934	+	38.4	1924	Intergenic	AluSx|SINE|Alu	-24451	NR_047461	100861522	Hs.580680	NR_047461	ENSG00000225759	LINC00489	-	long intergenic non-protein coding RNA 489	ncRNA	38.4	5.82	6.597938144	2.56E-15
chr20-1527	chr20	39286816	39288351	+	28.2	1535	Intergenic	Intergenic	30297	NM_005461	9935	Hs.169487	NM_005461	ENSG00000204103	MAFB	DURS3|KRML|MCTO	MAF bZIP transcription factor B	protein-coding	28.16	4.37	6.443935927	1.84E-11
chr20-1530	chr20	39645506	39646506	+	21.1	1000	"intron (NM_001318196, intron 2 of 2)"	"intron (NM_001318196, intron 2 of 2)"	-11452	NM_003286	7150	Hs.472737	NM_003286	ENSG00000198900	TOP1	TOPI	topoisomerase (DNA) I	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr20-1531	chr20	40574346	40575612	+	22.4	1266	Intergenic	AluJr|SINE|Alu	-327846	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	22.4	2.43	9.218106996	2.49E-11
chr20-1533	chr20	41873137	41875627	+	51.8	2490	Intergenic	Intergenic	-55825	NM_133170	11122	Hs.526879	NM_007050	ENSG00000196090	PTPRT	RPTPrho	"protein tyrosine phosphatase, receptor type T"	protein-coding	51.85	8.25	6.284848485	5.42E-19
chr20-1558	chr20	44924943	44925943	+	21.1	1000	"intron (NM_021248, intron 1 of 11)"	"intron (NM_021248, intron 1 of 11)"	11694	NM_021248	64405	Hs.472861	NM_021248	ENSG00000149654	CDH22	C20orf25|dJ998H6.1	cadherin 22	protein-coding	21.12	2.43	8.691358025	2.25E-10
chr20-1568	chr20	46718451	46719723	+	25	1272	Intergenic	L2a|LINE|L2	-100226	NR_110027	101927457	Hs.445823	NR_110027		LINC01522	-	long intergenic non-protein coding RNA 1522	ncRNA	24.96	4.37	5.711670481	4.38E-09
chr20-1573	chr20	46874672	46875948	+	26.2	1276	Intergenic	L2|LINE|L2	-113344	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	26.24	4.85	5.410309278	4.26E-09
chr20-1586	chr20	48114202	48115202	+	21.1	1000	Intergenic	MLT1H|LTR|ERVL-MaLR	-15521	NM_004975	3745	Hs.84244	NM_004975	ENSG00000158445	KCNB1	DRK1|Kv2.1	potassium voltage-gated channel subfamily B member 1	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr20-1587	chr20	48132293	48133557	+	24.3	1264	"intron (NM_000961, intron 6 of 9)"	AluJo|SINE|Alu	-33744	NM_004975	3745	Hs.84244	NM_004975	ENSG00000158445	KCNB1	DRK1|Kv2.1	potassium voltage-gated channel subfamily B member 1	protein-coding	24.32	4.37	5.565217391	4.38E-09
chr20-1591	chr20	48858593	48859939	+	23.7	1346	Intergenic	Intergenic	-24757	NM_001278655	100506115	Hs.235484	NM_001278655		LINC01272	-	long intergenic non-protein coding RNA 1272	protein-coding	23.68	1.94	12.20618557	6.71E-14
chr20-1594	chr20	49745188	49749096	+	72.3	3908	Intergenic	Intergenic	-107467	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	72.33	17.47	4.140240412	8.04E-18
chr20-1596	chr20	49847898	49848898	+	21.1	1000	Intergenic	Intergenic	-208723	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr20-1602	chr20	51395765	51396765	+	20.5	1000	Intergenic	MER103C|DNA|hAT-Charlie	158888	NR_110038	101927700	Hs.434465	NR_110038	ENSG00000234948	LINC01524	-	long intergenic non-protein coding RNA 1524	ncRNA	20.48	4.85	4.222680412	2.52E-06
chr20-1608	chr20	51998171	52000959	+	42.2	2788	"intron (NM_001193421, intron 2 of 2)"	AluSq|SINE|Alu	-169744	NR_110051	101927770		NR_110051		LOC101927770	-	uncharacterized LOC101927770	ncRNA	42.25	10.19	4.146221786	2.83E-11
chr20-161	chr20	44540072	44542004	+	47.4	1932	promoter-TSS (NM_001242920)	promoter-TSS (NM_001242920)	-35	NM_006227	5360	Hs.439312	NM_006227	ENSG00000100979	PLTP	BPIFE|HDLCQ9	phospholipid transfer protein	protein-coding	47.37	5.82	8.139175258	1.93E-21
chr20-1611	chr20	52639037	52640037	+	20.5	1000	"intron (NM_001316361, intron 4 of 9)"	"intron (NM_001316361, intron 4 of 9)"	36022	NM_001323347	8537	Hs.400556	NM_003657	ENSG00000064787	BCAS1	AIBC1|NABC1	breast carcinoma amplified sequence 1	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr20-1614	chr20	52780222	52784184	+	73.6	3962	"intron (NM_001128915, intron 5 of 10)"	"intron (NM_001128915, intron 5 of 10)"	8313	NM_000782	1591	Hs.89663	NM_000782	ENSG00000019186	CYP24A1	CP24|CYP24|HCAI|HCINF1|P450-CC24	cytochrome P450 family 24 subfamily A member 1	protein-coding	73.61	15.53	4.739858339	1.02E-20
chr20-1617	chr20	55012118	55013118	+	21.8	1000	"exon (NM_001164116, exon 3 of 7)"	"exon (NM_001164116, exon 3 of 7)"	25304	NM_001164114	57091	Hs.473144	NM_020356	ENSG00000087589	CASS4	C20orf32|CAS4|HEFL|HEPL	Cas scaffolding protein family member 4	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr20-1620	chr20	55183987	55189295	+	81.9	5308	Intergenic	Intergenic	-17717	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	81.93	17.96	4.561804009	2.08E-22
chr20-1622	chr20	55449081	55450081	+	21.8	1000	Intergenic	Intergenic	245223	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr20-1626	chr20	55753358	55754642	+	23	1284	"intron (NM_001719, intron 4 of 6)"	MER117|DNA|hAT-Charlie	-34752	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	23.04	4.85	4.750515464	1.15E-07
chr20-1627	chr20	55794870	55796125	+	25.6	1255	"intron (NM_001719, intron 2 of 6)"	"intron (NM_001719, intron 2 of 6)"	6745	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	25.6	3.88	6.597938144	1.00E-10
chr20-1633	chr20	55909197	55910465	+	24.3	1268	"exon (NM_012444, exon 6 of 13)"	"exon (NM_012444, exon 6 of 13)"	5000	NM_198265	23626	Hs.159737	NM_012444	ENSG00000054796	SPO11	CT35|SPATA43|TOPVIA	"SPO11, initiator of meiotic double stranded breaks"	protein-coding	24.32	3.4	7.152941176	7.55E-11
chr20-1641	chr20	56218268	56219549	+	24.3	1281	Intergenic	MER66B|LTR|ERV1	-23276	NM_001160418	81030	Hs.302123	NM_030776	ENSG00000124256	ZBP1	C20orf183|DAI|DLM-1|DLM1	Z-DNA binding protein 1	protein-coding	24.32	3.4	7.152941176	7.55E-11
chr20-1656	chr20	56740132	56743822	+	72.3	3690	Intergenic	MIRb|SINE|MIR	15994	NM_178456	128602	Hs.43977	NM_178456	ENSG00000124237	C20orf85	LLC1|bA196N14.1	chromosome 20 open reading frame 85	protein-coding	72.33	17.47	4.140240412	8.04E-18
chr20-1659	chr20	56796709	56801357	+	80.7	4648	"intron (NM_001304369, intron 1 of 3)"	AluJb|SINE|Alu	4676	NM_001304369	140731	Hs.266571	NM_080674	ENSG00000124227	ANKRD60	C20orf86|bA196N14.3	ankyrin repeat domain 60	protein-coding	80.65	17.47	4.616485404	2.46E-22
chr20-1669	chr20	57442748	57444313	+	33.3	1565	"intron (NR_126334, intron 3 of 4)"	"intron (NR_126334, intron 3 of 4)"	15494	NM_001309883	2778	Hs.125898	NM_000516	ENSG00000087460	GNAS	AHO|C20orf45|GNAS1|GPSA|GSA|GSP|NESP|POH|SCG6|SgVI	GNAS complex locus	protein-coding	33.28	7.28	4.571428571	4.51E-10
chr20-1676	chr20	58047052	58048586	+	30.1	1534	Intergenic	MER1B|DNA|hAT-Charlie	-104745	NM_001199505	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	30.08	4.85	6.202061856	2.13E-11
chr20-1680	chr20	58239198	58241127	+	39	1929	"intron (NM_001281507, intron 1 of 12)"	"intron (NM_001281507, intron 1 of 12)"	-11554	NM_001199506	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	39.04	6.8	5.741176471	1.26E-13
chr20-1700	chr20	59836657	59837922	+	23.7	1265	"intron (NM_001794, intron 2 of 15)"	"intron (NM_001794, intron 2 of 15)"	9807	NM_001794	1002	Hs.473231	NM_001794	ENSG00000179242	CDH4	CAD4|R-CAD|RCAD	cadherin 4	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr20-1716	chr20	61173079	61174950	+	41.6	1871	Intergenic	Intergenic	11895	NR_029676	406923		NR_029676	ENSG00000174407	MIR133A2	MIRN133A2|mir-133a-2	microRNA 133a-2	ncRNA	41.61	9.22	4.513015184	9.99E-12
chr20-1727	chr20	782633	783890	+	22.4	1257	Intergenic	AluSq2|SINE|Alu	-31079	NM_001289145	83541	Hs.574822	NM_031424	ENSG00000125898	FAM110A	C20orf55|F10|bA371L19.3	family with sequence similarity 110 member A	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr20-173	chr20	61779712	61784716	+	94.1	5004	Intergenic	Intergenic	-27638	NR_029670	406909		NR_029670	ENSG00000207598	MIR124-3	MIRN124-3|MIRN124A3|mir-124-3	microRNA 124-3	ncRNA	94.09	18.44	5.102494577	5.81E-28
chr20-1734	chr20	1783410	1786641	+	64	3231	Intergenic	Intergenic	-24633	NR_037142	100289473	Hs.641525	NR_037142	ENSG00000232528	LOC100289473	-	cytoskeleton associated protein 2-like pseudogene	pseudo	64.01	12.62	5.072107765	1.04E-19
chr20-1737	chr20	1912188	1916444	+	60.8	4256	"intron (NM_001330728, intron 7 of 8)"	"intron (NM_001330728, intron 7 of 8)"	-13540	NR_134520	727993	Hs.551466	NR_134520	ENSG00000233896	LOC727993	-	uncharacterized LOC727993	ncRNA	60.81	13.59	4.474613687	2.02E-16
chr20-1742	chr20	2219415	2220693	+	24.3	1278	Intergenic	MIR3|SINE|MIR	32480	NM_001287682	388780	Hs.132163	NM_001287682		LOC388780	-	uncharacterized LOC388780	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr20-1748	chr20	2371740	2373494	+	33.3	1754	"intron (NM_001254734, intron 1 of 11)"	"intron (NM_001254734, intron 1 of 11)"	11063	NM_001254734	343641	Hs.452039	NM_198994	ENSG00000166948	TGM6	SCA35|TG6|TGM3L|TGY|dJ734P14.3	transglutaminase 6	protein-coding	33.28	3.88	8.577319588	4.55E-16
chr20-1749	chr20	2375403	2376759	+	26.9	1356	"exon (NM_198994, exon 3 of 13)"	"exon (NM_198994, exon 3 of 13)"	14527	NM_001254734	343641	Hs.452039	NM_198994	ENSG00000166948	TGM6	SCA35|TG6|TGM3L|TGY|dJ734P14.3	transglutaminase 6	protein-coding	26.88	4.85	5.542268041	7.61E-10
chr20-1751	chr20	2517755	2519768	+	46.1	2013	"intron (NM_080751, intron 2 of 19)"	"intron (NM_080751, intron 2 of 19)"	1508	NM_080751	117532	Hs.352626	NM_080751	ENSG00000149488	TMC2	C20orf145	transmembrane channel like 2	protein-coding	46.09	10.19	4.523061825	3.26E-13
chr20-1759	chr20	4565151	4566151	+	20.5	1000	Intergenic	Intergenic	-101146	NM_001080121	5621	Hs.472010	NM_000311	ENSG00000171867	PRNP	ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30	prion protein	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr20-1764	chr20	6761298	6763402	+	39	2104	Intergenic	Intergenic	13605	NM_001200	650	Hs.73853	NM_001200	ENSG00000125845	BMP2	BDA2|BMP2A	bone morphogenetic protein 2	protein-coding	39.04	8.74	4.466819222	5.52E-11
chr20-1774	chr20	13127610	13129384	+	38.4	1774	"intron (NM_018327, intron 9 of 11)"	"intron (NM_018327, intron 9 of 11)"	-73921	NM_080826	140862	Hs.559353	NM_080826	ENSG00000101230	ISM1	C20orf82|ISM|Isthmin|bA149I18.1|dJ1077I2.1	isthmin 1	protein-coding	38.4	6.31	6.085578447	1.96E-14
chr20-1776	chr20	13186952	13187952	+	20.5	1000	Intergenic	MLT1J2|LTR|ERVL-MaLR	-14966	NM_080826	140862	Hs.559353	NM_080826	ENSG00000101230	ISM1	C20orf82|ISM|Isthmin|bA149I18.1|dJ1077I2.1	isthmin 1	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr20-1777	chr20	13195798	13204711	+	201.6	8913	Intergenic	Intergenic	-2164	NM_080826	140862	Hs.559353	NM_080826	ENSG00000101230	ISM1	C20orf82|ISM|Isthmin|bA149I18.1|dJ1077I2.1	isthmin 1	protein-coding	201.63	31.06	6.491629105	8.11E-72
chr20-1782	chr20	17157167	17158167	+	20.5	1000	Intergenic	Tigger15a|DNA|TcMar-Tigger	-49085	NM_001201528	5126	Hs.315186	NM_002594	ENSG00000125851	PCSK2	NEC 2|NEC-2|NEC2|PC2|SPC2	proprotein convertase subtilisin/kexin type 2	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr20-1784	chr20	17486303	17489730	+	60.2	3427	"intron (NM_001278608, intron 7 of 9)"	MER112|DNA|hAT-Charlie	23998	NM_001195	631	Hs.129702	NM_001195	ENSG00000125864	BFSP1	CP115|CP94|CTRCT33|LIFL-H	beaded filament structural protein 1	protein-coding	60.17	13.59	4.427520235	2.02E-16
chr20-1791	chr20	19973855	19975120	+	17.9	1265	"intron (NM_001242581, intron 10 of 11)"	"intron (NM_001242581, intron 10 of 11)"	-23447	NM_181528	51126	Hs.368783	NM_016100	ENSG00000173418	NAA20	NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1	"N(alpha)-acetyltransferase 20, NatB catalytic subunit"	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-1792	chr20	19985524	19986524	+	21.1	1000	Intergenic	Intergenic	-11910	NM_181528	51126	Hs.368783	NM_016100	ENSG00000173418	NAA20	NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1	"N(alpha)-acetyltransferase 20, NatB catalytic subunit"	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr20-1797	chr20	21454145	21455451	+	25.6	1306	Intergenic	MLT1J|LTR|ERVL-MaLR	39866	NM_002509	4821	Hs.516922	NM_002509	ENSG00000125820	NKX2-2	NKX2.2|NKX2B	NK2 homeobox 2	protein-coding	25.6	5.34	4.794007491	2.00E-08
chr20-1802	chr20	22946586	22948382	+	32.6	1796	Intergenic	L1PB1|LINE|L1	-68573	NM_001052	6754	Hs.673846	NM_001052	ENSG00000132671	SSTR4	SS-4-R|SS4-R|SS4R	somatostatin receptor 4	protein-coding	32.64	5.82	5.608247423	2.32E-11
chr20-1812	chr20	24745726	24746726	+	20.5	1000	Intergenic	Intergenic	-183640	NM_003650	8530	Hs.143212	NM_003650	ENSG00000077984	CST7	CMAP	cystatin F	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr20-1822	chr20	25838838	25841644	+	55.7	2806	Intergenic	SST1|Satellite|centr	-5584	NR_110001	101926935	Hs.737440	NR_110001		LOC101926935	-	uncharacterized LOC101926935	ncRNA	55.69	7.77	7.167310167	2.06E-22
chr20-1823	chr20	25844678	25845934	+	19.8	1256	Intergenic	G-rich|Low_complexity|Low_complexity	-10649	NR_110001	101926935	Hs.737440	NR_110001		LOC101926935	-	uncharacterized LOC101926935	ncRNA	19.84	3.88	5.113402062	7.67E-07
chr20-1831	chr20	31342978	31345165	+	37.8	2187	Intergenic	Intergenic	-6120	NM_001207055	1789	Hs.643024	NM_006892	ENSG00000088305	DNMT3B	ICF|ICF1|M.HsaIIIB	DNA methyltransferase 3 beta	protein-coding	37.76	7.77	4.85971686	1.66E-11
chr20-1832	chr20	31809227	31810847	+	28.8	1620	"intron (NM_001042439, intron 1 of 5)"	MLT1L|LTR|ERVL-MaLR	4921	NM_178466	128861	Hs.360989	NM_178466	ENSG00000131059	BPIFA3	C20orf71|SPLUNC3	BPI fold containing family A member 3	protein-coding	28.8	5.82	4.948453608	3.50E-09
chr20-1839	chr20	34720667	34722872	+	39.7	2205	"intron (NM_001258330, intron 3 of 20)"	AluJb|SINE|Alu	-20893	NM_012156	2036	Hs.437422	NM_012156	ENSG00000088367	EPB41L1	4.1N|MRD11	erythrocyte membrane protein band 4.1 like 1	protein-coding	39.69	8.25	4.810909091	2.95E-12
chr20-1840	chr20	34755251	34758399	+	54.4	3148	"intron (NM_012156, intron 1 of 21)"	MIRb|SINE|MIR	14163	NM_012156	2036	Hs.437422	NM_012156	ENSG00000088367	EPB41L1	4.1N|MRD11	erythrocyte membrane protein band 4.1 like 1	protein-coding	54.41	13.11	4.150266972	8.94E-14
chr20-1853	chr20	36780205	36781840	+	32	1635	"intron (NM_001323317, intron 2 of 11)"	"intron (NM_001323317, intron 2 of 11)"	12809	NM_004613	7052	Hs.517033	NM_004613	ENSG00000198959	TGM2	TG(C)|TGC	transglutaminase 2	protein-coding	32	6.31	5.071315372	1.20E-10
chr20-1855	chr20	36974269	36976591	+	40.3	2322	"intron (NM_004139, intron 1 of 14)"	LTR16C|LTR|ERVL	616	NM_004139	3929	Hs.154078	NM_004139	ENSG00000129988	LBP	BPIFD2	lipopolysaccharide binding protein	protein-coding	40.33	8.25	4.888484848	2.95E-12
chr20-1866	chr20	39976966	39978424	+	26.9	1458	"intron (NM_001301860, intron 4 of 19)"	"intron (NM_001301860, intron 4 of 19)"	8202	NM_001301860	64900	Hs.25897	NM_022896	ENSG00000132793	LPIN3	LIPN3L|SMP2	lipin 3	protein-coding	26.88	5.34	5.033707865	3.94E-09
chr20-1868	chr20	40354256	40355629	+	21.1	1373	Intergenic	Intergenic	-107809	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr20-1879	chr20	42478246	42479531	+	21.8	1285	Intergenic	Intergenic	-44470	NR_134577	105372626	Hs.130555	NR_134577	ENSG00000233277	LINC01728	-	long intergenic non-protein coding RNA 1728	ncRNA	21.76	4.85	4.486597938	5.54E-07
chr20-1886	chr20	42766184	42768181	+	38.4	1997	"intron (NM_020433, intron 2 of 5)"	AluJr|SINE|Alu	49036	NM_175913	57158	Hs.441737	NM_020433	ENSG00000149596	JPH2	CMH17|JP-2|JP2	junctophilin 2	protein-coding	38.4	8.74	4.393592677	5.52E-11
chr20-1892	chr20	43432011	43433011	+	19.2	1000	"intron (NM_001205317, intron 1 of 5)"	"intron (NM_001205317, intron 1 of 5)"	6468	NM_182970	140730	Hs.517065	NM_182970	ENSG00000101098	RIMS4	C20orf190|RIM 4|RIM-4|RIM4|RIM4-gamma|RIM4gamma	regulating synaptic membrane exocytosis 4	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr20-1893	chr20	43465188	43468472	+	64	3284	Intergenic	Intergenic	-27851	NM_001205317	140730	Hs.517065	NM_182970	ENSG00000101098	RIMS4	C20orf190|RIM 4|RIM-4|RIM4|RIM4-gamma|RIM4gamma	regulating synaptic membrane exocytosis 4	protein-coding	64.01	14.56	4.396291209	3.04E-17
chr20-1895	chr20	43505202	43506762	+	28.8	1560	Intergenic	L1MC2|LINE|L1	-8258	NM_139323	7529	Hs.643544	NM_003404	ENSG00000166913	YWHAB	GW128|HEL-S-1|HS1|KCIP-1|YWHAA	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta	protein-coding	28.8	3.88	7.422680412	1.97E-12
chr20-190	chr20	56134882	56139743	+	113.3	4861	"intron (NM_002591, intron 3 of 9)"	"intron (NM_002591, intron 3 of 9)"	1175	NM_002591	5105	Hs.1872	NM_002591	ENSG00000124253	PCK1	PEPCK-C|PEPCK1|PEPCKC	phosphoenolpyruvate carboxykinase 1	protein-coding	113.29	27.67	4.094325985	8.30E-27
chr20-1910	chr20	47110565	47111565	+	20.5	1000	Intergenic	AluY|SINE|Alu	122411	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	20.48	4.85	4.222680412	2.52E-06
chr20-1912	chr20	47933406	47935211	+	52.5	1805	Intergenic	L1MC1|LINE|L1	37088	NR_003030	692057		NR_003030	ENSG00000212304	SNORD12	HBII-99|MIR1259|MIRN1259	"small nucleolar RNA, C/D box 12"	snoRNA	52.49	9.71	5.40576725	2.20E-17
chr20-1927	chr20	49411798	49412798	+	19.8	1000	"intron (NM_001010974, intron 1 of 3)"	"intron (NM_001010974, intron 1 of 3)"	867	NM_001010974	55653	Hs.381178	NM_017843	ENSG00000124243	BCAS4	CNOL	breast carcinoma amplified sequence 4	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr20-1935	chr20	50925856	50927344	+	27.5	1488	Intergenic	Intergenic	-118076	NM_199427	55734	Hs.473082	NM_018197	ENSG00000020256	ZFP64	ZNF338	ZFP64 zinc finger protein	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr20-1936	chr20	51351184	51352551	+	22.4	1367	Intergenic	AluSg|SINE|Alu	114490	NR_110038	101927700	Hs.434465	NR_110038	ENSG00000234948	LINC01524	-	long intergenic non-protein coding RNA 1524	ncRNA	22.4	4.85	4.618556701	5.54E-07
chr20-1951	chr20	55231755	55233016	+	21.1	1261	Intergenic	Intergenic	28027	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr20-1958	chr20	55761278	55762555	+	25	1277	"intron (NM_001719, intron 3 of 6)"	"intron (NM_001719, intron 3 of 6)"	-26836	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	24.96	4.37	5.711670481	4.38E-09
chr20-1960	chr20	55811380	55812939	+	30.1	1559	"intron (NM_001719, intron 1 of 6)"	"intron (NM_001719, intron 1 of 6)"	23407	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	30.08	4.85	6.202061856	2.13E-11
chr20-1969	chr20	56142620	56145475	+	57	2855	Intergenic	MIRb|SINE|MIR	7910	NM_002591	5105	Hs.1872	NM_002591	ENSG00000124253	PCK1	PEPCK-C|PEPCK1|PEPCKC	phosphoenolpyruvate carboxykinase 1	protein-coding	56.97	10.68	5.334269663	3.77E-18
chr20-1980	chr20	56400911	56403137	+	39	2226	Intergenic	MLT1K|LTR|ERVL-MaLR	-68426	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	39.04	6.31	6.187004754	1.96E-14
chr20-1993	chr20	56714799	56715799	+	20.5	1000	Intergenic	Intergenic	-10684	NM_178456	128602	Hs.43977	NM_178456	ENSG00000124237	C20orf85	LLC1|bA196N14.1	chromosome 20 open reading frame 85	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr20-2006	chr20	57647230	57648933	+	33.9	1703	Intergenic	Intergenic	-30180	NM_016045	51012	Hs.656865	NM_016045	ENSG00000101166	PRELID3B	C20orf45|SLMO2|dJ543J19.5	PRELI domain containing 3B	protein-coding	33.92	7.28	4.659340659	4.51E-10
chr20-2016	chr20	57992281	57995731	+	66.6	3450	Intergenic	Intergenic	118524	NM_207032	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	66.57	13.59	4.898454746	8.51E-20
chr20-2018	chr20	58017817	58023964	+	103.1	6147	Intergenic	Intergenic	-131674	NM_001199505	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	103.05	24.27	4.245982695	1.78E-25
chr20-207	chr20	1086032	1088700	+	53.1	2668	Intergenic	LTR37A|LTR|ERV1	-6506	NM_178578	9491	Hs.471917	NM_006814	ENSG00000125818	PSMF1	PI31	proteasome inhibitor subunit 1	protein-coding	53.13	9.71	5.471678682	2.20E-17
chr20-2085	chr20	62474096	62476931	+	62.1	2835	Intergenic	Intergenic	-17053	NM_080622	140701	Hs.266774	NM_080622	ENSG00000183260	ABHD16B	C20orf135|dJ591C20.1	abhydrolase domain containing 16B	protein-coding	62.09	10.68	5.813670412	3.83E-21
chr20-2086	chr20	62678443	62679697	+	24.3	1254	TTS (NM_018419)	TTS (NM_018419)	1909	NM_018419	54345	Hs.8619	NM_018419	ENSG00000203883	SOX18	HLTRS|HLTS	SRY-box 18	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr20-2091	chr20	656473	661817	+	71	5344	Intergenic	MIR|SINE|MIR	-2322	NM_033129	85508	Hs.355284	NM_033129	ENSG00000215397	SCRT2	ZNF898B	scratch family transcriptional repressor 2	protein-coding	71.05	13.11	5.419527079	1.25E-22
chr20-2097	chr20	942704	945241	+	43.5	2537	"intron (NM_001040007, intron 3 of 3)"	MER20B|DNA|hAT-Charlie	38935	NM_001040007	343637	Hs.444980	NM_001029871	ENSG00000101282	RSPO4	C20orf182|CRISTIN4	R-spondin 4	protein-coding	43.53	6.8	6.401470588	8.79E-17
chr20-2098	chr20	949284	951563	+	41.6	2279	"intron (NM_001040007, intron 1 of 3)"	"intron (NM_001040007, intron 1 of 3)"	32484	NM_001040007	343637	Hs.444980	NM_001029871	ENSG00000101282	RSPO4	C20orf182|CRISTIN4	R-spondin 4	protein-coding	41.61	8.74	4.760869565	2.55E-12
chr20-2104	chr20	1752570	1753842	+	22.4	1272	TTS (NR_037142)	TTS (NR_037142)	7186	NR_037142	100289473	Hs.641525	NR_037142	ENSG00000232528	LOC100289473	-	cytoskeleton associated protein 2-like pseudogene	pseudo	22.4	4.85	4.618556701	5.54E-07
chr20-211	chr20	3711715	3714829	+	58.9	3114	promoter-TSS (NM_001318322)	promoter-TSS (NM_001318322)	-45	NM_052970	116835	Hs.516854	NM_052970	ENSG00000132622	HSPA12B	C20orf60	heat shock protein family A (Hsp70) member 12B	protein-coding	58.89	12.62	4.666402536	6.23E-17
chr20-2113	chr20	2226146	2227983	+	32.6	1837	Intergenic	MER68-int|LTR|ERVL	39490	NM_001287682	388780	Hs.132163	NM_001287682		LOC388780	-	uncharacterized LOC388780	protein-coding	32.64	4.85	6.729896907	5.03E-13
chr20-2122	chr20	2615079	2616079	+	19.2	1000	"intron (NM_080751, intron 17 of 19)"	"intron (NM_080751, intron 17 of 19)"	-17599	NM_006392	10528	Hs.376064	NM_006392	ENSG00000101361	NOP56	NOL5A|SCA36	NOP56 ribonucleoprotein	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr20-2126	chr20	2711502	2712502	+	19.8	1000	"intron (NR_138537, intron 7 of 17)"	MLT1J|LTR|ERVL-MaLR	38478	NR_138537	57593	Hs.471955	NM_020833	ENSG00000088881	EBF4	COE4|O/E-4	early B-cell factor 4	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr20-2143	chr20	6233361	6234645	+	22.4	1284	Intergenic	Intergenic	-129812	NM_017671	55612	Hs.472054	NM_017671	ENSG00000101311	FERMT1	C20orf42|DTGCU2|KIND1|UNC112A|URP1	fermitin family member 1	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr20-2144	chr20	6333009	6334573	+	26.2	1564	Intergenic	MER63B|DNA|hAT-Blackjack	-73588	NR_109953	101929244	Hs.542488	NR_109953	ENSG00000229876	CASC20	-	cancer susceptibility candidate 20 (non-protein coding)	ncRNA	26.24	5.34	4.913857678	2.00E-08
chr20-2151	chr20	9359319	9360319	+	19.8	1000	"intron (NM_000933, intron 9 of 35)"	"intron (NM_000933, intron 9 of 35)"	71372	NM_000933	5332	Hs.472101	NM_000933	ENSG00000101333	PLCB4	ARCND2|PI-PLC	phospholipase C beta 4	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr20-2157	chr20	13954470	13955735	+	24.3	1265	"intron (NR_073207, intron 1 of 18)"	"intron (NR_073207, intron 1 of 18)"	16163	NR_073206	80343	Hs.590879	NM_025229	ENSG00000101251	SEL1L2	C20orf50	SEL1L2 ERAD E3 ligase adaptor subunit	protein-coding	24.32	3.4	7.152941176	7.55E-11
chr20-2161	chr20	16694465	16696317	+	35.2	1852	Intergenic	Intergenic	-15218	NM_003092	6629	Hs.280378	NM_003092	ENSG00000125870	SNRPB2	Msl1|U2B''	small nuclear ribonucleoprotein polypeptide B2	protein-coding	35.2	3.88	9.072164948	5.09E-17
chr20-2165	chr20	17456998	17457998	+	19.8	1000	"intron (NM_002594, intron 11 of 11)"	"intron (NM_002594, intron 11 of 11)"	54516	NM_001195	631	Hs.129702	NM_001195	ENSG00000125864	BFSP1	CP115|CP94|CTRCT33|LIFL-H	beaded filament structural protein 1	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr20-2166	chr20	17495845	17496845	+	19.2	1000	"intron (NM_001278608, intron 4 of 9)"	"intron (NM_001278608, intron 4 of 9)"	15669	NM_001195	631	Hs.129702	NM_001195	ENSG00000125864	BFSP1	CP115|CP94|CTRCT33|LIFL-H	beaded filament structural protein 1	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr20-2168	chr20	17841100	17842100	+	20.5	1000	Intergenic	MLT1E1A|LTR|ERVL-MaLR	101989	NR_003045	692086	Hs.680747	NR_003045	ENSG00000212232	SNORD17	HBI-43	"small nucleolar RNA, C/D box 17"	snoRNA	20.48	0.97	21.11340206	2.68E-16
chr20-217	chr20	30446177	30447801	+	37.1	1624	"intron (NM_001320479, intron 6 of 9)"	MIRb|SINE|MIR	11055	NM_001012644	128853	Hs.434108	NM_080611	ENSG00000149599	DUSP15	C20orf57|VHY	dual specificity phosphatase 15	protein-coding	37.12	6.8	5.458823529	7.17E-13
chr20-2180	chr20	21056104	21057362	+	22.4	1258	Intergenic	MLT1B|LTR|ERVL-MaLR	-49891	NM_001163022	55857	Hs.187635	NM_018474	ENSG00000088970	KIZ	C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69	kizuna centrosomal protein	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr20-2183	chr20	21504299	21505911	+	30.7	1612	Intergenic	Intergenic	-10441	NM_002509	4821	Hs.516922	NM_002509	ENSG00000125820	NKX2-2	NKX2.2|NKX2B	NK2 homeobox 2	protein-coding	30.72	4.85	6.334020619	3.34E-12
chr20-2184	chr20	21665325	21666742	+	28.2	1417	"intron (NR_109878, intron 1 of 4)"	"intron (NR_109878, intron 1 of 4)"	18190	NR_109878	101929608	Hs.694665	NR_109878	ENSG00000280350	LINC01726	-	long intergenic non-protein coding RNA 1726	ncRNA	28.16	5.82	4.838487973	3.50E-09
chr20-2190	chr20	22363673	22365005	+	23	1332	Intergenic	Intergenic	36942	NR_027090	284788	Hs.651993	NR_027089	ENSG00000204684	LOC284788	-	uncharacterized LOC284788	ncRNA	23.04	5.34	4.314606742	4.49E-07
chr20-2192	chr20	23043256	23046349	+	57.6	3093	Intergenic	Intergenic	-14501	NM_000361	7056	Hs.2030	NM_000361	ENSG00000178726	THBD	AHUS6|BDCA3|CD141|THPH12|THRM|TM	thrombomodulin	protein-coding	57.61	11.65	4.945064378	1.67E-17
chr20-2195	chr20	23995163	23997686	+	41	2523	Intergenic	Intergenic	-27008	NM_178311	92086	Hs.355394	NM_080920	ENSG00000149435	GGTLC1	GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2	gamma-glutamyltransferase light chain 1	protein-coding	40.97	5.82	7.0395189	5.30E-17
chr20-2205	chr20	30174581	30177571	+	52.5	2990	Intergenic	Intergenic	-15010	NR_046853	100874042	Hs.373741	NR_046853	ENSG00000230613	HM13-AS1	-	HM13 antisense RNA 1	ncRNA	52.49	9.71	5.40576725	2.20E-17
chr20-2219	chr20	31826060	31827317	+	23	1257	"intron (NM_130852, intron 3 of 8)"	"intron (NM_130852, intron 3 of 8)"	2886	NM_016583	51297	Hs.211092	NM_016583	ENSG00000198183	BPIFA1	LUNX|NASG|PLUNC|SPLUNC1|SPURT|bA49G10.5	BPI fold containing family A member 1	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr20-2221	chr20	31911051	31912051	+	19.2	1000	Intergenic	Intergenic	40610	NM_033197	92747	Hs.65551	NM_033197	ENSG00000125999	BPIFB1	C20orf114|LPLUNC1	BPI fold containing family B member 1	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr20-2222	chr20	32475296	32476662	+	26.2	1366	Intergenic	MLT1C|LTR|ERVL-MaLR	76869	NM_176812	128866	Hs.472471	NM_176812	ENSG00000101421	CHMP4B	C20orf178|CHMP4A|CTPP3|CTRCT31|SNF7|SNF7-2|Shax1|VPS32B|Vps32-2|dJ553F4.4	charged multivesicular body protein 4B	protein-coding	26.24	5.82	4.508591065	7.99E-08
chr20-2225	chr20	33812068	33818359	+	126.7	6291	"intron (NM_006690, intron 1 of 8)"	L3|LINE|CR1	674	NM_006690	10893	Hs.715494	NM_006690	ENSG00000125966	MMP24	MMP-24|MMP25|MT-MMP 5|MT-MMP5|MT5-MMP|MT5MMP|MTMMP5	matrix metallopeptidase 24	protein-coding	126.74	26.21	4.835558947	1.11E-35
chr20-2228	chr20	34617183	34618183	+	19.8	1000	"intron (NM_080834, intron 11 of 11)"	"intron (NM_080834, intron 11 of 11)"	21199	NR_027451	647979	Hs.743232	NR_027451	ENSG00000260032	NORAD	LINC00657	non-coding RNA activated by DNA damage	ncRNA	19.84	3.88	5.113402062	7.67E-07
chr20-2229	chr20	34715024	34716676	+	30.7	1652	"intron (NM_001258330, intron 3 of 20)"	"intron (NM_001258330, intron 3 of 20)"	-26812	NM_012156	2036	Hs.437422	NM_012156	ENSG00000088367	EPB41L1	4.1N|MRD11	erythrocyte membrane protein band 4.1 like 1	protein-coding	30.72	7.28	4.21978022	9.24E-09
chr20-2235	chr20	35018381	35019381	+	19.8	1000	"intron (NM_014902, intron 2 of 12)"	"intron (NM_014902, intron 2 of 12)"	-70937	NM_001042486	22839	Hs.249600	NM_014902	ENSG00000080845	DLGAP4	DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4	DLG associated protein 4	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr20-2239	chr20	36272430	36273430	+	18.6	1000	Intergenic	Intergenic	-21409	NR_047461	100861522	Hs.580680	NR_047461	ENSG00000225759	LINC00489	-	long intergenic non-protein coding RNA 489	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr20-2256	chr20	39312056	39320580	+	148.5	8524	"3' UTR (NM_005461, exon 1 of 1)"	"3' UTR (NM_005461, exon 1 of 1)"	1562	NM_005461	9935	Hs.169487	NM_005461	ENSG00000204103	MAFB	DURS3|KRML|MCTO	MAF bZIP transcription factor B	protein-coding	148.5	27.67	5.366823274	9.92E-46
chr20-2261	chr20	39436590	39439430	+	47.4	2840	Intergenic	Intergenic	-120130	NM_005461	9935	Hs.169487	NM_005461	ENSG00000204103	MAFB	DURS3|KRML|MCTO	MAF bZIP transcription factor B	protein-coding	47.37	8.74	5.419908467	6.98E-16
chr20-2265	chr20	40790269	40791269	+	19.8	1000	"intron (NM_007050, intron 16 of 30)"	"intron (NM_007050, intron 16 of 30)"	-523354	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	19.84	3.88	5.113402062	7.67E-07
chr20-2271	chr20	42532224	42533224	+	19.8	1000	Intergenic	Intergenic	9366	NR_134577	105372626	Hs.130555	NR_134577	ENSG00000233277	LINC01728	-	long intergenic non-protein coding RNA 1728	ncRNA	19.84	3.4	5.835294118	1.47E-07
chr20-2277	chr20	42751564	42753763	+	43.5	2199	"intron (NM_020433, intron 2 of 5)"	"intron (NM_020433, intron 2 of 5)"	63555	NM_175913	57158	Hs.441737	NM_020433	ENSG00000149596	JPH2	CMH17|JP-2|JP2	junctophilin 2	protein-coding	43.53	7.77	5.602316602	3.96E-15
chr20-2286	chr20	43167394	43168659	+	25	1265	"intron (NM_007066, intron 1 of 3)"	MER30|DNA|hAT-Charlie	7604	NM_181804	11142	Hs.472831	NM_007066	ENSG00000168734	PKIG	PKI-gamma	cAMP-dependent protein kinase inhibitor gamma	protein-coding	24.96	5.34	4.674157303	9.72E-08
chr20-2287	chr20	43173632	43174632	+	19.8	1000	"intron (NM_007066, intron 1 of 3)"	Tigger13a|DNA|TcMar-Tigger	13710	NM_181804	11142	Hs.472831	NM_007066	ENSG00000168734	PKIG	PKI-gamma	cAMP-dependent protein kinase inhibitor gamma	protein-coding	19.84	1.46	13.5890411	1.82E-12
chr20-2288	chr20	43176807	43178270	+	30.1	1463	"intron (NM_007066, intron 1 of 3)"	(CA)n|Simple_repeat|Simple_repeat	17116	NM_181804	11142	Hs.472831	NM_007066	ENSG00000168734	PKIG	PKI-gamma	cAMP-dependent protein kinase inhibitor gamma	protein-coding	30.08	5.82	5.16838488	6.85E-10
chr20-2290	chr20	43421530	43423149	+	30.1	1619	"intron (NM_001205317, intron 1 of 5)"	MER115|DNA|hAT-Tip100	16640	NM_182970	140730	Hs.517065	NM_182970	ENSG00000101098	RIMS4	C20orf190|RIM 4|RIM-4|RIM4|RIM4-gamma|RIM4gamma	regulating synaptic membrane exocytosis 4	protein-coding	30.08	4.85	6.202061856	2.13E-11
chr20-2300	chr20	44152884	44154296	+	23.7	1412	Intergenic	Intergenic	-9326	NM_006652	10816	Hs.370724	NM_006652	ENSG00000101446	SPINT3	HKIB9	"serine peptidase inhibitor, Kunitz type 3"	protein-coding	23.68	3.4	6.964705882	5.45E-10
chr20-2304	chr20	44951664	44953909	+	42.2	2245	Intergenic	Intergenic	-15649	NM_021248	64405	Hs.472861	NM_021248	ENSG00000149654	CDH22	C20orf25|dJ998H6.1	cadherin 22	protein-coding	42.25	5.82	7.259450172	7.27E-18
chr20-2307	chr20	45223265	45225107	+	35.8	1842	"intron (NM_001193340, intron 6 of 12)"	"intron (NM_001193340, intron 6 of 12)"	-44973	NM_080721	128506	Hs.526636	NM_080721	ENSG00000149635	OCSTAMP	C20orf123|OC-STAMP|dJ257E24.3	osteoclast stimulatory transmembrane protein	protein-coding	35.84	6.8	5.270588235	3.95E-12
chr20-2311	chr20	45650765	45651765	+	19.8	1000	"intron (NM_005244, intron 5 of 15)"	"intron (NM_005244, intron 5 of 15)"	128002	NM_172110	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr20-2313	chr20	45721730	45722730	+	19.2	1000	"intron (NM_005244, intron 8 of 15)"	LTR18B|LTR|ERVL	-73379	NR_037410	100500814		NR_037410	ENSG00000264901	MIR3616	mir-3616	microRNA 3616	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr20-2325	chr20	46540408	46541408	+	20.5	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	-71062	NR_109942	101060004	Hs.129970	NR_109942		LINC01523	-	long intergenic non-protein coding RNA 1523	ncRNA	20.48	4.85	4.222680412	2.52E-06
chr20-2329	chr20	46797285	46809446	+	207.4	12161	Intergenic	Intergenic	-184504	NR_110027	101927457	Hs.445823	NR_110027		LINC01522	-	long intergenic non-protein coding RNA 1522	ncRNA	207.39	43.2	4.800694444	8.42E-57
chr20-2342	chr20	47383736	47385008	+	23.7	1272	"intron (NM_020820, intron 1 of 39)"	L2a|LINE|L2	60048	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr20-2343	chr20	47404121	47405121	+	19.8	1000	"intron (NM_020820, intron 1 of 39)"	"intron (NM_020820, intron 1 of 39)"	39799	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr20-2344	chr20	47415633	47416633	+	21.8	1000	"intron (NM_020820, intron 1 of 39)"	"intron (NM_020820, intron 1 of 39)"	28287	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	21.76	3.4	6.4	3.73E-09
chr20-2350	chr20	48035030	48036301	+	21.1	1271	"intron (NM_004975, intron 1 of 1)"	"intron (NM_004975, intron 1 of 1)"	63516	NM_004975	3745	Hs.84244	NM_004975	ENSG00000158445	KCNB1	DRK1|Kv2.1	potassium voltage-gated channel subfamily B member 1	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr20-2355	chr20	48788618	48790970	+	37.8	2352	"intron (NR_109943, intron 2 of 2)"	AluJo|SINE|Alu	687	NR_109943	101927541	Hs.570391	NR_109943	ENSG00000231742	LINC01273	-	long intergenic non-protein coding RNA 1273	ncRNA	37.76	5.34	7.071161049	1.96E-15
chr20-2357	chr20	48863024	48864815	+	33.3	1791	Intergenic	MIR|SINE|MIR	-20104	NM_001278655	100506115	Hs.235484	NM_001278655		LINC01272	-	long intergenic non-protein coding RNA 1272	protein-coding	33.28	5.34	6.232209738	6.04E-13
chr20-2365	chr20	49327231	49330612	+	48	3381	Intergenic	L2a|LINE|L2	-19160	NM_032521	84612	Hs.589848	NM_032521	ENSG00000124171	PARD6B	PAR6B	par-6 family cell polarity regulator beta	protein-coding	48.01	11.16	4.301971326	9.69E-13
chr20-2368	chr20	49466049	49467049	+	20.5	1000	"intron (NM_198799, intron 4 of 4)"	"intron (NM_198799, intron 4 of 4)"	55118	NM_001010974	55653	Hs.381178	NM_017843	ENSG00000124243	BCAS4	CNOL	breast carcinoma amplified sequence 4	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr20-2370	chr20	49701929	49705088	+	46.7	3159	Intergenic	Intergenic	-63833	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	46.73	11.65	4.011158798	1.33E-11
chr20-2373	chr20	49810367	49811830	+	26.2	1463	Intergenic	L1MB7|LINE|L1	-171423	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	26.24	4.37	6.004576659	7.40E-10
chr20-2375	chr20	49924598	49928185	+	73	3587	Intergenic	Intergenic	143123	NR_036162	100422889		NR_036162	ENSG00000266761	MIR3194	mir-3194	microRNA 3194	ncRNA	72.97	17.96	4.062917595	6.30E-18
chr20-2376	chr20	49980902	49982163	+	21.8	1261	Intergenic	Intergenic	87982	NR_036162	100422889		NR_036162	ENSG00000266761	MIR3194	mir-3194	microRNA 3194	ncRNA	21.76	3.88	5.608247423	2.53E-08
chr20-2379	chr20	50190180	50192263	+	35.8	2083	Intergenic	(TGAA)n|Simple_repeat|Simple_repeat	-11851	NM_001258294	4773	Hs.744148	NM_012340	ENSG00000101096	NFATC2	NFAT1|NFATP	nuclear factor of activated T-cells 2	protein-coding	35.84	5.82	6.158075601	1.09E-13
chr20-238	chr20	61061955	61068147	+	137.6	6192	Intergenic	MIR3|SINE|MIR	-14025	NM_080473	140628	Hs.352250	NM_080473	ENSG00000130700	GATA5	GATAS|bB379O24.1	GATA binding protein 5	protein-coding	137.62	27.18	5.063281825	5.95E-40
chr20-2381	chr20	50273978	50274978	+	20.5	1000	"intron (NM_006045, intron 13 of 27)"	MamRep137|DNA|TcMar?	-95108	NM_001258294	4773	Hs.744148	NM_012340	ENSG00000101096	NFATC2	NFAT1|NFATP	nuclear factor of activated T-cells 2	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr20-2383	chr20	51634718	51635718	+	19.2	1000	"intron (NM_173485, intron 1 of 2)"	"intron (NM_173485, intron 1 of 2)"	46272	NM_173485	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr20-2384	chr20	51646416	51647677	+	23	1261	"intron (NM_173485, intron 1 of 2)"	"intron (NM_173485, intron 1 of 2)"	58100	NM_173485	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	23.04	4.37	5.272311213	2.46E-08
chr20-2385	chr20	51686961	51688223	+	23	1262	"intron (NM_173485, intron 1 of 2)"	"intron (NM_173485, intron 1 of 2)"	98646	NM_173485	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr20-2386	chr20	51862366	51863366	+	19.8	1000	"intron (NM_001193421, intron 1 of 2)"	AluSx|SINE|Alu	61044	NM_001193421	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr20-2388	chr20	52005553	52006553	+	20.5	1000	"intron (NM_001193421, intron 2 of 2)"	"intron (NM_001193421, intron 2 of 2)"	-163256	NR_110051	101927770		NR_110051		LOC101927770	-	uncharacterized LOC101927770	ncRNA	20.48	4.85	4.222680412	2.52E-06
chr20-2391	chr20	52788514	52790022	+	27.5	1508	"intron (NM_001128915, intron 2 of 10)"	CpG	1248	NM_000782	1591	Hs.89663	NM_000782	ENSG00000019186	CYP24A1	CP24|CYP24|HCAI|HCINF1|P450-CC24	cytochrome P450 family 24 subfamily A member 1	protein-coding	27.52	5.82	4.728522337	1.71E-08
chr20-2396	chr20	53460981	53462310	+	21.8	1329	Intergenic	THE1B|LTR|ERVL-MaLR	369388	NM_177959	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding	21.76	5.34	4.074906367	1.97E-06
chr20-2413	chr20	55883612	55889750	+	87.1	6138	Intergenic	L1M5|LINE|L1	9966	NR_036219	100422883		NR_036219	ENSG00000266666	MIR4325	-	microRNA 4325	ncRNA	87.05	20.39	4.269249632	3.50E-22
chr20-2492	chr20	59473559	59474884	+	26.2	1325	Intergenic	L1ME4a|LINE|L1	-179899	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	26.24	4.85	5.410309278	4.26E-09
chr20-2493	chr20	59476414	59477414	+	23.7	1000	Intergenic	Intergenic	-177206	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	23.68	4.85	4.882474227	1.15E-07
chr20-2494	chr20	59505100	59506608	+	25.6	1508	Intergenic	Intergenic	-148266	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	25.6	4.85	5.278350515	4.26E-09
chr20-25	chr20	62715513	62721564	+	107.5	6051	"intron (NM_001200019, intron 2 of 5)"	CpG	2169	NM_001200019	4987	Hs.2859	NM_000913	ENSG00000125510	OPRL1	KOR-3|NOCIR|NOP|NOPr|OOR|ORL1	opioid related nociceptin receptor 1	protein-coding	107.53	19.9	5.403517588	8.14E-34
chr20-2501	chr20	59724814	59725814	+	18.6	1000	Intergenic	Intergenic	71194	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr20-2514	chr20	60997939	60999462	+	23	1523	"intron (NM_080833, intron 1 of 13)"	"intron (NM_080833, intron 1 of 13)"	3929	NM_080833	140893	Hs.180374	NM_080833	ENSG00000130701	RBBP8NL	C20orf151	RBBP8 N-terminal like	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr20-2548	chr20	123416	124971	+	27.5	1555	"intron (NM_030931, intron 1 of 1)"	L1ME4a|LINE|L1	999	NM_030931	81623	Hs.124211	NM_030931	ENSG00000125788	DEFB126	C20orf8|DEFB-26|DEFB26|HBD26|bA530N10.1|hBD-26	defensin beta 126	protein-coding	27.52	2.91	9.457044674	7.03E-14
chr20-2560	chr20	807109	809467	+	42.2	2358	Intergenic	Intergenic	-6052	NM_001289145	83541	Hs.574822	NM_031424	ENSG00000125898	FAM110A	C20orf55|F10|bA371L19.3	family with sequence similarity 110 member A	protein-coding	42.25	5.82	7.259450172	7.27E-18
chr20-2561	chr20	865239	866764	+	25	1525	"intron (NM_015985, intron 3 of 8)"	CpG	30976	NM_015985	51378	Hs.278973	NM_015985	ENSG00000101280	ANGPT4	ANG3|ANG4	angiopoietin 4	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr20-2567	chr20	1530980	1532559	+	24.3	1579	"intron (NM_178460, intron 2 of 3)"	"intron (NM_178460, intron 2 of 3)"	6574	NM_178460	128646	Hs.729560	NM_178460	ENSG00000125900	SIRPD	PTPNS1L2|dJ576H24.4	signal regulatory protein delta	protein-coding	24.32	3.4	7.152941176	7.55E-11
chr20-2569	chr20	1738751	1739751	+	19.2	1000	Intergenic	Intergenic	21141	NR_037142	100289473	Hs.641525	NR_037142	ENSG00000232528	LOC100289473	-	cytoskeleton associated protein 2-like pseudogene	pseudo	19.2	3.88	4.948453608	7.67E-07
chr20-2608	chr20	4581975	4585380	+	76.8	3405	Intergenic	AluJo|SINE|Alu	-83120	NM_001080121	5621	Hs.472010	NM_000311	ENSG00000171867	PRNP	ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30	prion protein	protein-coding	76.81	17.96	4.276726058	8.34E-20
chr20-2615	chr20	5409550	5410550	+	20.5	1000	Intergenic	Intergenic	16344	NR_038240	100507629	Hs.121383	NR_038239	ENSG00000226995	LINC00658	-	long intergenic non-protein coding RNA 658	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr20-2622	chr20	6791694	6794635	+	41.6	2941	Intergenic	Intergenic	44419	NM_001200	650	Hs.73853	NM_001200	ENSG00000125845	BMP2	BDA2|BMP2A	bone morphogenetic protein 2	protein-coding	41.61	6.8	6.119117647	3.54E-15
chr20-2625	chr20	7939089	7940089	+	19.8	1000	Intergenic	T-rich|Low_complexity|Low_complexity	-18496	NM_017545	54363	Hs.193640	NM_017545	ENSG00000101323	HAO1	GOX|GOX1|HAOX1	hydroxyacid oxidase 1	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr20-2630	chr20	10244783	10245783	+	18.6	1000	"intron (NM_001322909, intron 2 of 8)"	"intron (NM_001322909, intron 2 of 8)"	-45129	NR_040710	100131208	Hs.658178	NR_040710	ENSG00000227906	SNAP25-AS1	-	SNAP25 antisense RNA 1	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr20-2644	chr20	16619039	16620303	+	21.1	1264	Intergenic	Intergenic	-65592	NM_001199866	55614	Hs.101774	NM_024704	ENSG00000089177	KIF16B	C20orf23|KISC20ORF|SNX23	kinesin family member 16B	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr20-2646	chr20	17183544	17184544	+	22.4	1000	Intergenic	Intergenic	-22708	NM_001201528	5126	Hs.315186	NM_002594	ENSG00000125851	PCSK2	NEC 2|NEC-2|NEC2|PC2|SPC2	proprotein convertase subtilisin/kexin type 2	protein-coding	22.4	5.34	4.194756554	1.97E-06
chr20-2657	chr20	18021545	18022545	+	19.2	1000	"intron (NM_001303462, intron 2 of 2)"	AluSx3|SINE|Alu	16481	NM_021220	58495	Hs.661013	NM_021220	ENSG00000125850	OVOL2	EUROIMAGE566589|PPCD1|ZNF339	ovo like zinc finger 2	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr20-2661	chr20	19702126	19703516	+	23.7	1390	"3' UTR (NM_020689, exon 17 of 17)"	"3' UTR (NM_020689, exon 17 of 17)"	-164344	NM_001242581	54453	Hs.472270	NM_018993	ENSG00000132669	RIN2	MACS|RASSF4	Ras and Rab interactor 2	protein-coding	23.68	5.34	4.434456929	4.49E-07
chr20-2667	chr20	20206095	20207095	+	19.8	1000	"intron (NM_015585, intron 17 of 26)"	"intron (NM_015585, intron 17 of 26)"	-142170	NM_002196	3642	Hs.89584	NM_002196	ENSG00000173404	INSM1	IA-1|IA1	INSM transcriptional repressor 1	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr20-2671	chr20	20911569	20913494	+	33.3	1925	Intergenic	Intergenic	-194093	NM_001163022	55857	Hs.187635	NM_018474	ENSG00000088970	KIZ	C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69	kizuna centrosomal protein	protein-coding	33.28	4.37	7.615560641	6.77E-15
chr20-2675	chr20	21063029	21064566	+	34.6	1537	Intergenic	Intergenic	-42827	NM_001163022	55857	Hs.187635	NM_018474	ENSG00000088970	KIZ	C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69	kizuna centrosomal protein	protein-coding	34.56	4.85	7.125773196	1.02E-14
chr20-2677	chr20	21273764	21274764	+	19.2	1000	Intergenic	L1ME1|LINE|L1	-9658	NM_012255	22803	Hs.255932	NM_012255	ENSG00000088930	XRN2	-	5'-3' exoribonuclease 2	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr20-2679	chr20	21689349	21696574	+	132.5	7225	"intron (NM_006192, intron 4 of 4)"	"intron (NM_006192, intron 4 of 4)"	6664	NM_006192	5075	Hs.122310	NM_006192	ENSG00000125813	PAX1	HUP48|OFC2	paired box 1	protein-coding	132.5	30.58	4.332897319	4.94E-33
chr20-268	chr20	56323151	56324793	+	35.2	1642	Intergenic	Intergenic	-37380	NM_199171	56937	Hs.517155	NM_020182	ENSG00000124225	PMEPA1	STAG1|TMEPAI	"prostate transmembrane protein, androgen induced 1"	protein-coding	35.2	3.4	10.35294118	1.99E-18
chr20-2686	chr20	23186256	23187522	+	20.5	1266	Intergenic	MER5A|DNA|hAT-Charlie	-73616	NR_034149	200261	Hs.352228	NM_182535	ENSG00000233746	LINC00656	-	long intergenic non-protein coding RNA 656	ncRNA	20.48	0.97	21.11340206	2.68E-16
chr20-2688	chr20	24076421	24077672	+	19.8	1251	Intergenic	Intergenic	-103357	NR_040102	400839	Hs.651965	NR_040102	ENSG00000230133	LINC01721	-	long intergenic non-protein coding RNA 1721	ncRNA	19.84	4.37	4.540045767	3.16E-06
chr20-2692	chr20	24405123	24406539	+	23.7	1416	Intergenic	Intergenic	-44004	NM_024893	79953	Hs.124638	NM_024893	ENSG00000101463	SYNDIG1	C20orf39|DSPC2|IFITMD5|TMEM90B	synapse differentiation inducing 1	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr20-270	chr20	58026861	58029210	+	58.9	2349	Intergenic	L2b|LINE|L2	-124529	NM_001199505	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	58.89	8.74	6.73798627	5.39E-23
chr20-2700	chr20	25216741	25218034	+	19.8	1293	Intergenic	Intergenic	-11319	NM_002862	5834	Hs.368157	NM_002862	ENSG00000100994	PYGB	GPBB	glycogen phosphorylase B	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr20-2706	chr20	30020844	30021844	+	19.8	1000	Intergenic	MLT1F2|LTR|ERVL-MaLR	-4361	NR_045677	245935	Hs.526624	NR_002577	ENSG00000204547	DEFB122	DEFB-22|DEFB122P|DEFB22	defensin beta 122 (pseudogene)	pseudo	19.84	4.37	4.540045767	3.16E-06
chr20-2713	chr20	30862508	30863827	+	19.8	1319	Intergenic	HAL1|LINE|L1	-2287	NM_004798	9371	Hs.369670	NM_004798	ENSG00000101350	KIF3B	FLA8|HH0048|KLP-11	kinesin family member 3B	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr20-2714	chr20	31349732	31351031	+	20.5	1299	"5' UTR (NM_175848, exon 1 of 22)"	"5' UTR (NM_175848, exon 1 of 22)"	190	NM_006892	1789	Hs.643024	NM_006892	ENSG00000088305	DNMT3B	ICF|ICF1|M.HsaIIIB	DNA methyltransferase 3 beta	protein-coding	20.48	0	21.09680742	5.97E-21
chr20-2720	chr20	31875630	31876630	+	19.2	1000	"intron (NM_033197, intron 2 of 15)"	"intron (NM_033197, intron 2 of 15)"	5189	NM_033197	92747	Hs.65551	NM_033197	ENSG00000125999	BPIFB1	C20orf114|LPLUNC1	BPI fold containing family B member 1	protein-coding	19.2	2.43	7.901234568	1.91E-09
chr20-2733	chr20	34892927	34894537	+	25	1610	promoter-TSS (NM_014902)	promoter-TSS (NM_014902)	-513	NM_014902	22839	Hs.249600	NM_014902	ENSG00000080845	DLGAP4	DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4	DLG associated protein 4	protein-coding	24.96	2.91	8.577319588	5.77E-12
chr20-2735	chr20	34994527	34997002	+	46.1	2475	"intron (NM_014902, intron 2 of 12)"	"intron (NM_014902, intron 2 of 12)"	-94054	NM_001042486	22839	Hs.249600	NM_014902	ENSG00000080845	DLGAP4	DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4	DLG associated protein 4	protein-coding	46.09	8.25	5.586666667	7.02E-16
chr20-2737	chr20	36098000	36099000	+	18.6	1000	Intergenic	L2a|LINE|L2	50205	NM_001317075	10904	Hs.472651	NM_006698	ENSG00000166619	BLCAP	BC10	bladder cancer associated protein	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr20-2738	chr20	36221224	36222224	+	19.2	1000	Intergenic	MIRb|SINE|MIR	29797	NR_047461	100861522	Hs.580680	NR_047461	ENSG00000225759	LINC00489	-	long intergenic non-protein coding RNA 489	ncRNA	19.2	4.37	4.393592677	3.16E-06
chr20-2740	chr20	36884454	36885793	+	25.6	1339	"intron (NM_001029864, intron 1 of 13)"	AluJo|SINE|Alu	-3454	NR_104170	149684	Hs.628250	NR_104170	ENSG00000101425	LOC149684	-	uncharacterized LOC149684	ncRNA	25.6	4.85	5.278350515	4.26E-09
chr20-2741	chr20	36988143	36989143	+	19.8	1000	"intron (NM_004139, intron 5 of 14)"	AluSx|SINE|Alu	13829	NM_004139	3929	Hs.154078	NM_004139	ENSG00000129988	LBP	BPIFD2	lipopolysaccharide binding protein	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr20-2743	chr20	37292043	37296595	+	80	4552	Intergenic	MADE2|DNA|TcMar-Mariner	-58786	NM_080552	140679	Hs.179080	NM_080552	ENSG00000101438	SLC32A1	VGAT|VIAAT	solute carrier family 32 member 1	protein-coding	80.01	11.16	7.169354839	1.24E-31
chr20-2749	chr20	37944139	37945393	+	24.3	1254	Intergenic	Intergenic	-91375	NR_027124	339568	Hs.434319	NR_027124	ENSG00000230324	LINC01734	-	long intergenic non-protein coding RNA 1734	ncRNA	24.32	4.85	5.01443299	2.27E-08
chr20-2754	chr20	38484355	38485355	+	19.8	1000	Intergenic	Intergenic	-148248	NR_109936	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	19.84	4.85	4.090721649	1.08E-05
chr20-2767	chr20	39441213	39442213	+	18.6	1000	Intergenic	Intergenic	-123833	NM_005461	9935	Hs.169487	NM_005461	ENSG00000204103	MAFB	DURS3|KRML|MCTO	MAF bZIP transcription factor B	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr20-2771	chr20	40300330	40301974	+	28.2	1644	Intergenic	Intergenic	-54019	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	28.16	5.82	4.838487973	3.50E-09
chr20-2774	chr20	40758454	40759454	+	18.6	1000	"intron (NM_007050, intron 18 of 30)"	LTR33A_|LTR|ERVL	-511821	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	18.56	0	19.11898173	9.96E-18
chr20-2779	chr20	41844829	41846848	+	39.7	2019	Intergenic	Intergenic	-27281	NM_133170	11122	Hs.526879	NM_007050	ENSG00000196090	PTPRT	RPTPrho	"protein tyrosine phosphatase, receptor type T"	protein-coding	39.69	8.25	4.810909091	2.95E-12
chr20-2781	chr20	41899239	41900585	+	25.6	1346	Intergenic	MIRb|SINE|MIR	-81355	NM_133170	11122	Hs.526879	NM_007050	ENSG00000196090	PTPRT	RPTPrho	"protein tyrosine phosphatase, receptor type T"	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr20-2782	chr20	41989493	41990493	+	19.2	1000	Intergenic	Intergenic	-96511	NM_006275	6431	Hs.684950	NM_006275	ENSG00000124193	SRSF6	B52|HEL-S-91|SFRS6|SRP55	serine and arginine rich splicing factor 6	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr20-2783	chr20	42189391	42190391	+	19.8	1000	"intron (NM_170693, intron 1 of 12)"	L2a|LINE|L2	2256	NM_170693	10110	Hs.300863	NM_016276	ENSG00000101049	SGK2	H-SGK2|dJ138B7.2	"SGK2, serine/threonine kinase 2"	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr20-2784	chr20	42376423	42377423	+	19.2	1000	Intergenic	Intergenic	-21281	NM_176791	149699	Hs.447626	NM_176791	ENSG00000124196	GTSF1L	C20orf65|FAM112A|dJ1028D15.4	gametocyte specific factor 1 like	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr20-2795	chr20	42986245	42987245	+	19.2	1000	"intron (NM_001030003, intron 1 of 9)"	"intron (NM_001030003, intron 1 of 9)"	2304	NM_001030003	3172	Hs.116462	NM_000457	ENSG00000101076	HNF4A	FRTS4|HNF4|HNF4a7|HNF4a8|HNF4a9|HNF4alpha|MODY|MODY1|NR2A1|NR2A21|TCF|TCF14	hepatocyte nuclear factor 4 alpha	protein-coding	19.2	2.43	7.901234568	1.91E-09
chr20-2811	chr20	43771916	43775198	+	58.9	3282	Intergenic	Intergenic	-20451	NM_080869	128488	Hs.352180	NM_080869	ENSG00000168703	WFDC12	C20orf122|SWAM2|WAP2|dJ211D12.4	WAP four-disulfide core domain 12	protein-coding	58.89	10.19	5.779195289	2.14E-20
chr20-2815	chr20	43966416	43967706	+	27.5	1290	"intron (NM_002999, intron 1 of 4)"	"intron (NM_002999, intron 1 of 4)"	10003	NM_002999	6385	Hs.632267	NM_002999	ENSG00000124145	SDC4	SYND4	syndecan 4	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr20-2820	chr20	44455455	44457187	+	30.1	1732	promoter-TSS (NM_003279)	promoter-TSS (NM_003279)	-368	NM_003279	7125	Hs.182421	NM_003279	ENSG00000101470	TNNC2	-	"troponin C2, fast skeletal type"	protein-coding	30.08	3.88	7.75257732	2.58E-13
chr20-2845	chr20	45513337	45514337	+	20.5	1000	Intergenic	Charlie4a|DNA|hAT-Charlie	-9426	NM_005244	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr20-2857	chr20	46926404	46927404	+	18.6	1000	Intergenic	MLT1F2|LTR|ERVL-MaLR	-61750	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr20-2859	chr20	46953683	46956937	+	48	3254	Intergenic	Intergenic	-33344	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	48.01	9.22	5.207158351	3.58E-15
chr20-2870	chr20	48102862	48103862	+	19.2	1000	Intergenic	Intergenic	-4181	NM_004975	3745	Hs.84244	NM_004975	ENSG00000158445	KCNB1	DRK1|Kv2.1	potassium voltage-gated channel subfamily B member 1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr20-2873	chr20	48159819	48161549	+	27.5	1730	"intron (NM_000961, intron 4 of 9)"	"intron (NM_000961, intron 4 of 9)"	24023	NM_000961	5740	Hs.302085	NM_000961	ENSG00000124212	PTGIS	CYP8|CYP8A1|PGIS|PTGI	prostaglandin I2 synthase	protein-coding	27.52	2.43	11.32510288	2.19E-15
chr20-2879	chr20	48905082	48908186	+	62.7	3104	Intergenic	Intergenic	-2623	NR_034124	284751	Hs.282325	NM_001025463	ENSG00000203999	LINC01270	-	long intergenic non-protein coding RNA 1270	ncRNA	62.73	8.74	7.177345538	1.53E-25
chr20-288	chr20	62099578	62102939	+	66.6	3361	"intron (NM_172107, intron 1 of 16)"	"intron (NM_172107, intron 1 of 16)"	2772	NM_004518	3785	Hs.161851	NM_004518	ENSG00000075043	KCNQ2	BFNC|EBN|EBN1|ENB1|HNSPC|KCNA11|KV7.2	potassium voltage-gated channel subfamily Q member 2	protein-coding	66.57	10.19	6.532875368	3.63E-25
chr20-2897	chr20	50897438	50900616	+	60.2	3178	Intergenic	MLT1N2|LTR|ERVL-MaLR	-90503	NM_199427	55734	Hs.473082	NM_018197	ENSG00000020256	ZFP64	ZNF338	ZFP64 zinc finger protein	protein-coding	60.17	11.65	5.164806867	6.32E-19
chr20-2900	chr20	51272322	51273595	+	24.3	1273	Intergenic	AluSz|SINE|Alu	35581	NR_110038	101927700	Hs.434465	NR_110038	ENSG00000234948	LINC01524	-	long intergenic non-protein coding RNA 1524	ncRNA	24.32	4.37	5.565217391	4.38E-09
chr20-2901	chr20	51422219	51423740	+	26.9	1521	Intergenic	MIRb|SINE|MIR	-165967	NM_173485	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	26.88	3.4	7.905882353	1.25E-12
chr20-2916	chr20	53722095	53723482	+	23.7	1387	Intergenic	L1M2|LINE|L1	-316793	NR_110629	102723578	Hs.446269	NR_110629	ENSG00000235166	LINC01440	-	long intergenic non-protein coding RNA 1440	ncRNA	23.68	4.85	4.882474227	1.15E-07
chr20-2923	chr20	55787861	55792629	+	84.5	4768	"intron (NR_110631, intron 3 of 3)"	"intron (NR_110631, intron 3 of 3)"	1493	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	84.49	13.11	6.444698703	3.65E-31
chr20-2931	chr20	56041670	56046446	+	80	4776	Intergenic	L2a|LINE|L2	55865	NM_001269041	140690	Hs.131543	NM_080618	ENSG00000124092	CTCFL	BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2	CCCTC-binding factor like	protein-coding	80.01	18.44	4.338937093	1.55E-20
chr20-294	chr20	6031880	6034000	+	53.1	2120	"exon (NM_152611, exon 2 of 5)"	"exon (NM_152611, exon 2 of 5)"	1786	NM_152611	164312	Hs.149133	NM_152611	ENSG00000125872	LRRN4	C20orf75|NLRR-4|NLRR4|dJ1056H1.1	leucine rich repeat neuronal 4	protein-coding	53.13	9.22	5.762472885	3.88E-18
chr20-2945	chr20	56174490	56176721	+	38.4	2231	Intergenic	Intergenic	20027	NM_001160419	81030	Hs.302123	NM_030776	ENSG00000124256	ZBP1	C20orf183|DAI|DLM-1|DLM1	Z-DNA binding protein 1	protein-coding	38.4	7.77	4.942084942	3.34E-12
chr20-2947	chr20	56242941	56243941	+	19.2	1000	"intron (NM_199171, intron 1 of 3)"	MIR|SINE|MIR	22239	NM_001255976	56937	Hs.517155	NM_020182	ENSG00000124225	PMEPA1	STAG1|TMEPAI	"prostate transmembrane protein, androgen induced 1"	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr20-2960	chr20	56454493	56459932	+	101.8	5439	Intergenic	Intergenic	-13238	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	101.77	21.36	4.764513109	2.91E-28
chr20-2976	chr20	57331046	57334268	+	62.1	3222	Intergenic	MLT2A1|LTR|ERVL	-15824	NR_134566	105372695	Hs.128204	NR_134566		LOC105372695	-	uncharacterized LOC105372695	ncRNA	62.09	14.56	4.264423077	5.82E-16
chr20-3001	chr20	58181165	58182165	+	18.6	1000	"intron (NM_080672, intron 1 of 12)"	"intron (NM_080672, intron 1 of 12)"	2063	NM_080672	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr20-3011	chr20	59232996	59235152	+	37.8	2156	Intergenic	Intergenic	94454	NR_039653	100616440		NR_039653	ENSG00000265617	MIR548AG2	-	microRNA 548ag-2	ncRNA	37.76	8.74	4.320366133	2.45E-10
chr20-3013	chr20	59304231	59305545	+	22.4	1314	Intergenic	MER1B|DNA|hAT-Charlie	165268	NR_039653	100616440		NR_039653	ENSG00000265617	MIR548AG2	-	microRNA 548ag-2	ncRNA	22.4	4.37	5.125858124	1.32E-07
chr20-3020	chr20	59547297	59548571	+	21.8	1274	Intergenic	L1ME2|LINE|L1	-106186	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	21.76	3.88	5.608247423	2.53E-08
chr20-3022	chr20	59569869	59570869	+	19.2	1000	Intergenic	Intergenic	-83751	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	19.2	3.4	5.647058824	1.47E-07
chr20-3024	chr20	59646024	59648318	+	38.4	2294	Intergenic	THE1B|LTR|ERVL-MaLR	-6949	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	38.4	8.74	4.393592677	5.52E-11
chr20-3034	chr20	59867286	59868286	+	17.9	1000	"intron (NM_001794, intron 2 of 15)"	"intron (NM_001794, intron 2 of 15)"	40304	NM_001794	1002	Hs.473231	NM_001794	ENSG00000179242	CDH4	CAD4|R-CAD|RCAD	cadherin 4	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-3040	chr20	60902766	60904843	+	34.6	2077	"intron (NM_005560, intron 34 of 79)"	"intron (NM_005560, intron 34 of 79)"	3809	NR_039915	100616340		NR_039915	ENSG00000130702	MIR4758	-	microRNA 4758	ncRNA	34.56	5.82	5.93814433	6.75E-13
chr20-3044	chr20	61019111	61020658	+	23	1547	Intergenic	Intergenic	-17255	NM_080833	140893	Hs.180374	NM_080833	ENSG00000130701	RBBP8NL	C20orf151	RBBP8 N-terminal like	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr20-3048	chr20	61183090	61188742	+	94.7	5652	Intergenic	Intergenic	23797	NR_029676	406923		NR_029676	ENSG00000174407	MIR133A2	MIRN133A2|mir-133a-2	microRNA 133a-2	ncRNA	94.73	23.3	4.065665236	8.73E-23
chr20-305	chr20	34763449	34768102	+	88.3	4653	"intron (NM_012156, intron 3 of 21)"	"intron (NM_012156, intron 3 of 21)"	23113	NM_012156	2036	Hs.437422	NM_012156	ENSG00000088367	EPB41L1	4.1N|MRD11	erythrocyte membrane protein band 4.1 like 1	protein-coding	88.33	15.53	5.687701223	2.36E-29
chr20-3058	chr20	61786505	61788154	+	28.8	1649	Intergenic	Intergenic	-22523	NR_029670	406909		NR_029670	ENSG00000207598	MIR124-3	MIRN124-3|MIRN124A3|mir-124-3	microRNA 124-3	ncRNA	28.8	3.88	7.422680412	1.97E-12
chr20-3060	chr20	61995007	61996007	+	19.2	1000	"intron (NR_110634, intron 2 of 4)"	"intron (NR_110634, intron 2 of 4)"	-2759	NM_001256573	1137	Hs.10734	NM_000744	ENSG00000101204	CHRNA4	BFNC|EBN|EBN1|NACHR|NACHRA4|NACRA4	cholinergic receptor nicotinic alpha 4 subunit	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr20-3065	chr20	62113119	62115093	+	39	1974	Intergenic	Intergenic	-10076	NM_172108	3785	Hs.161851	NM_004518	ENSG00000075043	KCNQ2	BFNC|EBN|EBN1|ENB1|HNSPC|KCNA11|KV7.2	potassium voltage-gated channel subfamily Q member 2	protein-coding	39.04	6.31	6.187004754	1.96E-14
chr20-3066	chr20	62388440	62391668	+	57.6	3228	"intron (NM_025224, intron 3 of 4)"	L1ME3|LINE|L1	18843	NM_020062	56731	Hs.435126	NM_020062	ENSG00000125520	SLC2A4RG	GEF|HDBP-1|HDBP1|Si-1-2|Si-1-2-19	SLC2A4 regulator	protein-coding	57.61	13.11	4.394355454	1.10E-15
chr20-3080	chr20	679831	680831	+	19.2	1000	Intergenic	Intergenic	-23508	NM_033129	85508	Hs.355284	NM_033129	ENSG00000215397	SCRT2	ZNF898B	scratch family transcriptional repressor 2	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr20-309	chr20	42799541	42802975	+	68.5	3434	"intron (NM_020433, intron 1 of 5)"	AluJr|SINE|Alu	14960	NM_175913	57158	Hs.441737	NM_020433	ENSG00000149596	JPH2	CMH17|JP-2|JP2	junctophilin 2	protein-coding	68.49	9.71	7.053553038	5.93E-27
chr20-3091	chr20	1076602	1077602	+	19.2	1000	Intergenic	Intergenic	-16770	NM_178578	9491	Hs.471917	NM_006814	ENSG00000125818	PSMF1	PI31	proteasome inhibitor subunit 1	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr20-3099	chr20	1679337	1680337	+	17.9	1000	Intergenic	Intergenic	-41412	NM_001039508	55423	Hs.590883	NM_018556	ENSG00000089012	SIRPG	CD172g|SIRP-B2|SIRPB2|SIRPgamma|bA77C3.1	signal regulatory protein gamma	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-3102	chr20	1777199	1778199	+	19.2	1000	Intergenic	L1MCb|LINE|L1	-17307	NR_037142	100289473	Hs.641525	NR_037142	ENSG00000232528	LOC100289473	-	cytoskeleton associated protein 2-like pseudogene	pseudo	19.2	4.37	4.393592677	3.16E-06
chr20-3108	chr20	1882807	1884358	+	30.7	1551	"intron (NM_001330728, intron 2 of 8)"	AluSx|SINE|Alu	7756	NM_001040023	140885	Hs.581021	NM_080792	ENSG00000198053	SIRPA	BIT|CD172A|MFR|MYD-1|P84|PTPNS1|SHPS1|SIRP	signal regulatory protein alpha	protein-coding	30.72	4.85	6.334020619	3.34E-12
chr20-3113	chr20	2272747	2273747	+	17.9	1000	Intergenic	Intergenic	-3366	NM_003245	7053	Hs.2022	NM_003245	ENSG00000125780	TGM3	TGE	transglutaminase 3	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-3128	chr20	3147401	3150113	+	47.4	2712	"intron (NM_001282533, intron 1 of 5)"	CpG	5481	NM_001282533	9762	Hs.90232	NM_014731	ENSG00000088899	LZTS3	PROSAPIP1	leucine zipper tumor suppressor family member 3	protein-coding	47.37	6.8	6.966176471	2.78E-19
chr20-3143	chr20	4421535	4422535	+	18.6	1000	Intergenic	Intergenic	-192376	NM_000678	146	Hs.557	NM_000678	ENSG00000171873	ADRA1D	ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2	adrenoceptor alpha 1D	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr20-3150	chr20	4595869	4596869	+	18.6	1000	Intergenic	Intergenic	-70428	NM_001080121	5621	Hs.472010	NM_000311	ENSG00000171867	PRNP	ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30	prion protein	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr20-3152	chr20	5270402	5271402	+	17.9	1000	Intergenic	L1MA8|LINE|L1	26476	NM_144773	128674	Hs.375029	NM_144773	ENSG00000101292	PROKR2	GPR73L1|GPR73b|GPRg2|HH3|KAL3|PKR2|dJ680N4.3	prokineticin receptor 2	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr20-3156	chr20	6254453	6256544	+	33.9	2091	Intergenic	MLT1C|LTR|ERVL-MaLR	-151307	NM_017671	55612	Hs.472054	NM_017671	ENSG00000101311	FERMT1	C20orf42|DTGCU2|KIND1|UNC112A|URP1	fermitin family member 1	protein-coding	33.92	4.85	6.993814433	7.28E-14
chr20-3159	chr20	7126958	7127958	+	18.6	1000	"intron (NR_110609, intron 7 of 7)"	"intron (NR_110609, intron 7 of 7)"	107391	NR_110609	101929265	Hs.637730	NR_110609	ENSG00000228888	LINC01428	-	long intergenic non-protein coding RNA 1428	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr20-3161	chr20	7829396	7830396	+	18.6	1000	Intergenic	GA-rich|Low_complexity|Low_complexity	91197	NM_017545	54363	Hs.193640	NM_017545	ENSG00000101323	HAO1	GOX|GOX1|HAOX1	hydroxyacid oxidase 1	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr20-3163	chr20	9037692	9038692	+	18.6	1000	Intergenic	L1M7|LINE|L1	-11509	NM_001172646	5332	Hs.472101	NM_000933	ENSG00000101333	PLCB4	ARCND2|PI-PLC	phospholipase C beta 4	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr20-3178	chr20	13873574	13874574	+	19.2	1000	"intron (NR_073207, intron 5 of 18)"	L1M4c|LINE|L1	97191	NR_073206	80343	Hs.590879	NM_025229	ENSG00000101251	SEL1L2	C20orf50	SEL1L2 ERAD E3 ligase adaptor subunit	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr20-3194	chr20	17510760	17512417	+	28.2	1657	"intron (NM_001278608, intron 3 of 9)"	CpG	426	NM_001195	631	Hs.129702	NM_001195	ENSG00000125864	BFSP1	CP115|CP94|CTRCT33|LIFL-H	beaded filament structural protein 1	protein-coding	28.16	5.82	4.838487973	3.50E-09
chr20-3197	chr20	17809405	17810405	+	18.6	1000	Intergenic	AluJr|SINE|Alu	129312	NM_001014977	140836	Hs.115366	NM_178477	ENSG00000125888	BANF2	BAF-L|BAF2|BAFL|C20orf179	barrier to autointegration factor 2	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr20-3201	chr20	18035828	18039847	+	76.2	4019	"intron (NM_001303461, intron 1 of 3)"	CpG-16434	689	NM_021220	58495	Hs.661013	NM_021220	ENSG00000125850	OVOL2	EUROIMAGE566589|PPCD1|ZNF339	ovo like zinc finger 2	protein-coding	76.17	18.93	4.023771791	3.81E-18
chr20-3206	chr20	18484589	18485589	+	17.9	1000	Intergenic	Intergenic	-3099	NM_032985	10483	Hs.369373	NM_006363	ENSG00000101310	SEC23B	CDA-II|CDAII|CDAN2|CWS7|HEMPAS	"Sec23 homolog B, coat complex II component"	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-3207	chr20	19434412	19435412	+	17.3	1000	"intron (NM_020689, intron 2 of 16)"	"intron (NM_020689, intron 2 of 16)"	-169672	NR_024564	100130264	Hs.683814	NR_024564	ENSG00000179447	LOC100130264	-	uncharacterized LOC100130264	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr20-3211	chr20	20187674	20188929	+	22.4	1255	"intron (NM_015585, intron 17 of 26)"	"intron (NM_015585, intron 17 of 26)"	151011	NM_001167816	26074	Hs.729168	NM_015585	ENSG00000089101	CFAP61	C20orf26|CaM-IP3|dJ1002M8.3|dJ1178H5.4	cilia and flagella associated protein 61	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr20-3212	chr20	20350899	20352549	+	30.1	1650	TTS (NM_002196)	TTS (NM_002196)	2959	NM_002196	3642	Hs.89584	NM_002196	ENSG00000173404	INSM1	IA-1|IA1	INSM transcriptional repressor 1	protein-coding	30.08	3.88	7.75257732	2.58E-13
chr20-3214	chr20	20735179	20736179	+	18.6	1000	Intergenic	AluSq2|SINE|Alu	-42413	NM_020343	57186	Hs.472285	NM_020343	ENSG00000188559	RALGAPA2	AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220	Ral GTPase activating protein catalytic alpha subunit 2	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr20-3216	chr20	20767486	20768486	+	17.3	1000	Intergenic	LTR16E1|LTR|ERVL	-74720	NM_020343	57186	Hs.472285	NM_020343	ENSG00000188559	RALGAPA2	AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220	Ral GTPase activating protein catalytic alpha subunit 2	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr20-3222	chr20	21496540	21499857	+	76.8	3317	Intergenic	Intergenic	-3534	NM_002509	4821	Hs.516922	NM_002509	ENSG00000125820	NKX2-2	NKX2.2|NKX2B	NK2 homeobox 2	protein-coding	76.81	14.08	5.455255682	7.30E-25
chr20-3238	chr20	23194873	23197081	+	39	2208	Intergenic	Intergenic	-82704	NR_034149	200261	Hs.352228	NM_182535	ENSG00000233746	LINC00656	-	long intergenic non-protein coding RNA 656	ncRNA	39.04	6.31	6.187004754	1.96E-14
chr20-3242	chr20	24220499	24222753	+	46.1	2254	Intergenic	AluSx3|SINE|Alu	41223	NR_040102	400839	Hs.651965	NR_040102	ENSG00000230133	LINC01721	-	long intergenic non-protein coding RNA 1721	ncRNA	46.09	7.28	6.331043956	1.62E-17
chr20-3244	chr20	24615985	24616985	+	19.2	1000	"intron (NM_024893, intron 3 of 3)"	"intron (NM_024893, intron 3 of 3)"	166043	NM_001323607	79953	Hs.124638	NM_024893	ENSG00000101463	SYNDIG1	C20orf39|DSPC2|IFITMD5|TMEM90B	synapse differentiation inducing 1	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr20-3246	chr20	24780880	24782599	+	28.2	1719	Intergenic	Intergenic	-148127	NM_003650	8530	Hs.143212	NM_003650	ENSG00000077984	CST7	CMAP	cystatin F	protein-coding	28.16	3.4	8.282352941	1.50E-13
chr20-3252	chr20	24908578	24910142	+	25	1564	Intergenic	HERVE-int|LTR|ERV1	-20506	NM_003650	8530	Hs.143212	NM_003650	ENSG00000077984	CST7	CMAP	cystatin F	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr20-3262	chr20	30454992	30461895	+	137.6	6903	promoter-TSS (NM_001320479)	promoter-TSS (NM_001320479)	24	NM_001320478	128853	Hs.434108	NM_080611	ENSG00000149599	DUSP15	C20orf57|VHY	dual specificity phosphatase 15	protein-coding	137.62	33.01	4.169039685	6.99E-33
chr20-3266	chr20	30608430	30611339	+	46.7	2909	"intron (NM_080625, intron 5 of 8)"	L4|LINE|RTE	11639	NM_080625	140706	Hs.382151	NM_080625	ENSG00000101331	CCM2L	C20orf160|dJ310O13.5	CCM2 like scaffolding protein	protein-coding	46.73	9.22	5.068329718	1.85E-14
chr20-3270	chr20	30686934	30688189	+	22.4	1255	"intron (NM_002110, intron 12 of 12)"	L2|LINE|L2	-9748	NM_014742	9777	Hs.654665	NM_014742	ENSG00000101337	TM9SF4	dJ836N17.2	transmembrane 9 superfamily member 4	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr20-328	chr20	57223702	57225840	+	55	2138	Intergenic	CpG	-1538	NR_037943	8675	Hs.307913	NM_003763	ENSG00000124222	STX16	SYN16	syntaxin 16	protein-coding	55.05	11.65	4.725321888	4.03E-16
chr20-3285	chr20	34604967	34605967	+	18.6	1000	"intron (NR_130714, intron 8 of 8)"	L3|LINE|CR1	33415	NR_027451	647979	Hs.743232	NR_027451	ENSG00000260032	NORAD	LINC00657	non-coding RNA activated by DNA damage	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr20-3291	chr20	34769891	34773101	+	53.8	3210	"intron (NM_012156, intron 6 of 21)"	"intron (NM_012156, intron 6 of 21)"	28834	NM_012156	2036	Hs.437422	NM_012156	ENSG00000088367	EPB41L1	4.1N|MRD11	erythrocyte membrane protein band 4.1 like 1	protein-coding	53.77	11.16	4.818100358	4.63E-16
chr20-3295	chr20	34960147	34966564	+	119.7	6417	"intron (NM_014902, intron 1 of 12)"	"intron (NM_014902, intron 1 of 12)"	69110	NM_014902	22839	Hs.249600	NM_014902	ENSG00000080845	DLGAP4	DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4	DLG associated protein 4	protein-coding	119.7	29.12	4.110576923	2.37E-28
chr20-3297	chr20	35029239	35030497	+	19.2	1258	"intron (NM_014902, intron 2 of 12)"	"intron (NM_014902, intron 2 of 12)"	-59950	NM_001042486	22839	Hs.249600	NM_014902	ENSG00000080845	DLGAP4	DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4	DLG associated protein 4	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr20-3302	chr20	36560654	36561931	+	21.1	1277	"intron (NM_080607, intron 2 of 3)"	"intron (NM_080607, intron 2 of 3)"	29793	NM_080607	128434	Hs.517029	NM_080607	ENSG00000132821	VSTM2L	C20orf102|dJ1118M15.2	V-set and transmembrane domain containing 2 like	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr20-3307	chr20	36906458	36907733	+	21.8	1275	"intron (NR_104170, intron 1 of 1)"	"intron (NR_104170, intron 1 of 1)"	-17921	NM_001029864	85449	Hs.472690	NM_001029864	ENSG00000149633	KIAA1755	-	KIAA1755	protein-coding	21.76	5.34	4.074906367	1.97E-06
chr20-331	chr20	57830895	57831895	+	26.2	1000	"3' UTR (NM_178457, exon 5 of 5)"	"3' UTR (NM_178457, exon 5 of 5)"	-44087	NM_001302455	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	26.24	6.31	4.158478605	2.77E-07
chr20-3320	chr20	38078194	38079194	+	17.9	1000	Intergenic	LTR33|LTR|ERVL	-225303	NR_027124	339568	Hs.434319	NR_027124	ENSG00000230324	LINC01734	-	long intergenic non-protein coding RNA 1734	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr20-3323	chr20	38828852	38829852	+	19.2	1000	Intergenic	Intergenic	196249	NR_109937	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	19.2	4.37	4.393592677	3.16E-06
chr20-3331	chr20	39330471	39332590	+	43.5	2119	Intergenic	L1MC5|LINE|L1	-13650	NM_005461	9935	Hs.169487	NM_005461	ENSG00000204103	MAFB	DURS3|KRML|MCTO	MAF bZIP transcription factor B	protein-coding	43.53	7.28	5.979395604	6.36E-16
chr20-3332	chr20	39341016	39342860	+	33.9	1844	Intergenic	Intergenic	-24058	NM_005461	9935	Hs.169487	NM_005461	ENSG00000204103	MAFB	DURS3|KRML|MCTO	MAF bZIP transcription factor B	protein-coding	33.92	6.8	4.988235294	1.08E-10
chr20-3337	chr20	39649784	39650784	+	17.3	1000	"intron (NM_001318197, intron 3 of 3)"	"intron (NM_001318197, intron 3 of 3)"	-7174	NM_003286	7150	Hs.472737	NM_003286	ENSG00000198900	TOP1	TOPI	topoisomerase (DNA) I	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr20-3338	chr20	39989251	39990251	+	17.9	1000	TTS (NR_126051)	TTS (NR_126051)	5747	NM_052846	90187	Hs.726525	NM_052846	ENSG00000183798	EMILIN3	C20orf130|EMILIN5|dJ620E11.4	elastin microfibril interfacer 3	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr20-3343	chr20	40828965	40830357	+	26.2	1392	"intron (NM_007050, intron 15 of 30)"	"intron (NM_007050, intron 15 of 30)"	-484462	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	26.24	4.37	6.004576659	7.40E-10
chr20-3350	chr20	41879292	41880556	+	21.8	1264	Intergenic	LTR16C|LTR|ERVL	-61367	NM_133170	11122	Hs.526879	NM_007050	ENSG00000196090	PTPRT	RPTPrho	"protein tyrosine phosphatase, receptor type T"	protein-coding	21.76	4.37	4.979405034	1.32E-07
chr20-3358	chr20	42686692	42687692	+	17.9	1000	"intron (NM_001098798, intron 5 of 7)"	L1PB1|LINE|L1	112656	NM_001098798	84969	Hs.26608	NM_032883	ENSG00000124191	TOX2	C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1	TOX high mobility group box family member 2	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-3368	chr20	42903492	42904492	+	17.9	1000	"intron (NM_024034, intron 5 of 5)"	L2c|LINE|L2	28094	NR_046353	78997	Hs.517059	NM_024034	ENSG00000124194	GDAP1L1	dJ881L22.1|dJ995J12.1.1	ganglioside induced differentiation associated protein 1 like 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-3372	chr20	42954048	42959518	+	117.8	5470	Intergenic	Intergenic	-9015	NM_178491	140902	Hs.580807	NM_178491	ENSG00000101074	R3HDML	dJ881L22.3	R3H domain containing like	protein-coding	117.77	24.27	4.852492789	2.12E-33
chr20-3378	chr20	43095218	43096218	+	19.2	1000	Intergenic	MIR|SINE|MIR	-1734	NR_132342	140834	Hs.357589	NM_001287807	ENSG00000168746	LINC01620	C20orf62|dJ1013A22.3	long intergenic non-protein coding RNA 1620	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr20-3385	chr20	43417729	43419421	+	26.2	1692	"intron (NM_001205317, intron 1 of 5)"	L3|LINE|CR1	20404	NM_182970	140730	Hs.517065	NM_182970	ENSG00000101098	RIMS4	C20orf190|RIM 4|RIM-4|RIM4|RIM4-gamma|RIM4gamma	regulating synaptic membrane exocytosis 4	protein-coding	26.24	5.82	4.508591065	7.99E-08
chr20-3393	chr20	43958039	43959039	+	18.6	1000	"intron (NM_002999, intron 4 of 4)"	MIRc|SINE|MIR	18525	NM_002999	6385	Hs.632267	NM_002999	ENSG00000124145	SDC4	SYND4	syndecan 4	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr20-3398	chr20	44251038	44252038	+	17.9	1000	"intron (NM_147198, intron 1 of 4)"	"intron (NM_147198, intron 1 of 4)"	-6847	NM_080753	140832	Hs.199380	NM_080753	ENSG00000180305	WFDC10A	C20orf146|WAP10|dJ688G8.3	WAP four-disulfide core domain 10A	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-3399	chr20	44342575	44343575	+	17.9	1000	Intergenic	L1PA11|LINE|L1	-7899	NM_178455	391253	Hs.677891	NM_178455	ENSG00000149651	SPINT4	C20orf137|SPINT3|dJ601O1.1	"serine peptidase inhibitor, Kunitz type 4"	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-3412	chr20	45253408	45254408	+	18.6	1000	"intron (NM_001193340, intron 2 of 12)"	LTR78|LTR|ERV1	26192	NM_001193342	64849	Hs.655498	NM_022829	ENSG00000158296	SLC13A3	NADC3|SDCT2	solute carrier family 13 member 3	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr20-3413	chr20	45262709	45263962	+	21.1	1253	"intron (NM_001193340, intron 2 of 12)"	"intron (NM_001193340, intron 2 of 12)"	16765	NM_001193342	64849	Hs.655498	NM_022829	ENSG00000158296	SLC13A3	NADC3|SDCT2	solute carrier family 13 member 3	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr20-3414	chr20	45332740	45335509	+	48.6	2769	Intergenic	Intergenic	-4155	NM_030777	81031	Hs.305971	NM_030777	ENSG00000197496	SLC2A10	ATS|GLUT10	solute carrier family 2 member 10	protein-coding	48.65	8.74	5.566361556	1.25E-16
chr20-3422	chr20	46295683	46296946	+	19.8	1263	"intron (NM_198596, intron 11 of 20)"	Charlie8|DNA|hAT-Charlie	118494	NM_018837	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr20-3436	chr20	46938561	46940209	+	29.4	1648	Intergenic	Intergenic	-49269	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	29.44	4.85	6.070103093	2.13E-11
chr20-3438	chr20	46948493	46951440	+	49.3	2947	Intergenic	L1MEg|LINE|L1	-38688	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	49.29	10.68	4.615168539	5.88E-14
chr20-3444	chr20	47069483	47070483	+	19.2	1000	Intergenic	MER1B|DNA|hAT-Charlie	81329	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr20-3446	chr20	47117135	47118434	+	21.1	1299	Intergenic	Intergenic	129130	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	21.12	3.88	5.443298969	1.44E-07
chr20-3451	chr20	47302831	47304632	+	32.6	1801	"intron (NM_020820, intron 10 of 39)"	L2|LINE|L2	140689	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	32.64	7.77	4.200772201	7.28E-09
chr20-3459	chr20	47473197	47475470	+	37.1	2273	Intergenic	Intergenic	-29913	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	37.12	6.8	5.458823529	7.17E-13
chr20-3464	chr20	48016924	48017924	+	17.9	1000	"intron (NM_004975, intron 1 of 1)"	L2b|LINE|L2	81757	NM_004975	3745	Hs.84244	NM_004975	ENSG00000158445	KCNB1	DRK1|Kv2.1	potassium voltage-gated channel subfamily B member 1	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-3473	chr20	48638884	48640655	+	32	1771	Intergenic	Intergenic	18397	NR_051976	100887755	Hs.195705	NR_051976		TRERNA1	LINC00651|treRNA	translation regulatory long non-coding RNA 1	ncRNA	32	5.82	5.498281787	2.32E-11
chr20-3477	chr20	48933315	48934582	+	23.7	1267	"intron (NR_109950, intron 1 of 2)"	"intron (NR_109950, intron 1 of 2)"	3931	NR_109950	101927586	Hs.637665	NR_109950	ENSG00000233077	LINC01271	-	long intergenic non-protein coding RNA 1271	ncRNA	23.68	3.4	6.964705882	5.45E-10
chr20-3485	chr20	49614689	49620570	+	106.9	5881	Intergenic	Intergenic	22046	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	106.89	21.36	5.004213483	5.05E-31
chr20-3486	chr20	49629690	49630956	+	22.4	1266	"intron (NM_002237, intron 1 of 2)"	"intron (NM_002237, intron 1 of 2)"	9352	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr20-3489	chr20	49660252	49661252	+	19.2	1000	Intergenic	AluSg|SINE|Alu	-21077	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr20-3499	chr20	49930680	49932764	+	38.4	2084	Intergenic	Intergenic	137792	NR_036162	100422889		NR_036162	ENSG00000266761	MIR3194	mir-3194	microRNA 3194	ncRNA	38.4	5.82	6.597938144	2.56E-15
chr20-3500	chr20	49968917	49970543	+	26.9	1626	Intergenic	AluSc|SINE|Alu	99784	NR_036162	100422889		NR_036162	ENSG00000266761	MIR3194	mir-3194	microRNA 3194	ncRNA	26.88	3.4	7.905882353	1.25E-12
chr20-3512	chr20	51993683	51994957	+	21.1	1274	"intron (NM_001193421, intron 2 of 2)"	AluJb|SINE|Alu	-174989	NR_110051	101927770		NR_110051		LOC101927770	-	uncharacterized LOC101927770	ncRNA	21.12	4.37	4.832951945	6.64E-07
chr20-3513	chr20	52082038	52083483	+	26.9	1445	"intron (NM_001193421, intron 2 of 2)"	AluSg|SINE|Alu	-86549	NR_110051	101927770		NR_110051		LOC101927770	-	uncharacterized LOC101927770	ncRNA	26.88	2.91	9.237113402	7.03E-14
chr20-3515	chr20	52436432	52437432	+	18.6	1000	Intergenic	L1M1|LINE|L1	55316	NR_002189	391257	Hs.449977	NR_002189		SUMO1P1	PIC1L|UBL2|UBL6	SUMO1 pseudogene 1	pseudo	18.56	2.91	6.378006873	1.38E-07
chr20-3520	chr20	53244372	53245993	+	25	1621	"intron (NM_177959, intron 6 of 7)"	"intron (NM_177959, intron 6 of 7)"	152925	NM_177959	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr20-3525	chr20	55697872	55698872	+	18.6	1000	Intergenic	MER117|DNA|hAT-Charlie	-90380	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	18.56	0.97	19.13402062	1.12E-13
chr20-3533	chr20	55857378	55861665	+	58.2	4287	Intergenic	Intergenic	-17814	NM_001719	655	Hs.473163	NM_001719	ENSG00000101144	BMP7	OP-1	bone morphogenetic protein 7	protein-coding	58.25	11.65	5	1.67E-17
chr20-3536	chr20	56009438	56010438	+	19.2	1000	Intergenic	Intergenic	43484	NM_001291780	55544	Hs.236361	NM_017495	ENSG00000132819	RBM38	HSRNASEB|RNPC1|SEB4B|SEB4D|dJ800J21.2	RNA binding motif protein 38	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr20-354	chr20	1919901	1921220	+	31.4	1319	TTS (NM_080792)	TTS (NM_080792)	-7296	NR_134520	727993	Hs.551466	NR_134520	ENSG00000233896	LOC727993	-	uncharacterized LOC727993	ncRNA	31.36	3.4	9.223529412	1.89E-15
chr20-3546	chr20	56271472	56283314	+	247.1	11842	"intron (NM_199171, intron 1 of 3)"	"intron (NM_199171, intron 1 of 3)"	7638	NM_020182	56937	Hs.517155	NM_020182	ENSG00000124225	PMEPA1	STAG1|TMEPAI	"prostate transmembrane protein, androgen induced 1"	protein-coding	247.07	36.89	6.697478992	2.68E-90
chr20-3551	chr20	56393121	56394121	+	17.9	1000	Intergenic	Intergenic	-76829	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr20-3552	chr20	56413569	56417922	+	87.7	4353	Intergenic	L4|LINE|RTE	-54705	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	87.69	13.11	6.688787185	8.35E-33
chr20-3559	chr20	56647971	56648971	+	17.3	1000	Intergenic	Intergenic	-77512	NM_178456	128602	Hs.43977	NM_178456	ENSG00000124237	C20orf85	LLC1|bA196N14.1	chromosome 20 open reading frame 85	protein-coding	17.28	1.46	11.83561644	2.99E-10
chr20-3568	chr20	56753249	56754707	+	30.7	1458	Intergenic	Intergenic	27995	NM_178456	128602	Hs.43977	NM_178456	ENSG00000124237	C20orf85	LLC1|bA196N14.1	chromosome 20 open reading frame 85	protein-coding	30.72	5.82	5.278350515	1.29E-10
chr20-3580	chr20	57202227	57207054	+	80	4827	Intergenic	Intergenic	-5188	NR_125359	79160	Hs.280135	NR_125359	ENSG00000268941	LINC01711	-	long intergenic non-protein coding RNA 1711	ncRNA	80.01	14.56	5.495192308	1.31E-25
chr20-3581	chr20	57220896	57221896	+	18.6	1000	Intergenic	Intergenic	-4913	NR_037943	8675	Hs.307913	NM_003763	ENSG00000124222	STX16	SYN16	syntaxin 16	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr20-3587	chr20	57395762	57397371	+	33.3	1609	"intron (NR_002785, intron 4 of 4)"	"intron (NR_002785, intron 4 of 4)"	-3198	NR_030580	100126296		NR_030580	ENSG00000216031	MIR298	MIRN298|hsa-mir-298	microRNA 298	ncRNA	33.28	5.34	6.232209738	6.04E-13
chr20-3591	chr20	57638991	57640533	+	32	1542	Intergenic	Intergenic	-21861	NM_016045	51012	Hs.656865	NM_016045	ENSG00000101166	PRELID3B	C20orf45|SLMO2|dJ543J19.5	PRELI domain containing 3B	protein-coding	32	5.82	5.498281787	2.32E-11
chr20-3607	chr20	58007379	58010120	+	52.5	2741	Intergenic	LTR16C|LTR|ERVL	133267	NM_207032	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	52.49	11.16	4.703405018	2.24E-15
chr20-3612	chr20	58063468	58069720	+	108.8	6252	Intergenic	Intergenic	-85970	NM_001199505	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	108.81	25.24	4.311014263	1.45E-27
chr20-3623	chr20	58305923	58307766	+	33.3	1843	"intron (NM_183246, intron 1 of 11)"	"intron (NM_183246, intron 1 of 11)"	10579	NM_183244	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	33.28	6.31	5.274167987	2.25E-11
chr20-3626	chr20	58318731	58319731	+	19.2	1000	"intron (NM_001199505, intron 2 of 12)"	MIR3|SINE|MIR	22966	NM_183244	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr20-3628	chr20	58379437	58382200	+	58.9	2763	"intron (NM_001199505, intron 7 of 12)"	MER94|DNA|hAT-Blackjack	84553	NM_183244	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	58.89	14.08	4.182528409	3.13E-15
chr20-363	chr20	21078814	21079814	+	26.2	1000	Intergenic	Intergenic	-27310	NM_001163022	55857	Hs.187635	NM_018474	ENSG00000088970	KIZ	C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69	kizuna centrosomal protein	protein-coding	26.24	4.85	5.410309278	4.26E-09
chr20-3634	chr20	59298406	59299406	+	18.6	1000	Intergenic	L1ME3B|LINE|L1	159286	NR_039653	100616440		NR_039653	ENSG00000265617	MIR548AG2	-	microRNA 548ag-2	ncRNA	18.56	4.37	4.247139588	1.41E-05
chr20-3646	chr20	59770497	59771497	+	18.6	1000	Intergenic	Intergenic	-56485	NM_001794	1002	Hs.473231	NM_001794	ENSG00000179242	CDH4	CAD4|R-CAD|RCAD	cadherin 4	protein-coding	18.56	1.46	12.71232877	2.41E-11
chr20-3653	chr20	59929543	59930543	+	19.2	1000	"intron (NM_001794, intron 2 of 15)"	"intron (NM_001794, intron 2 of 15)"	102561	NM_001794	1002	Hs.473231	NM_001794	ENSG00000179242	CDH4	CAD4|R-CAD|RCAD	cadherin 4	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr20-3656	chr20	60793132	60802872	+	163.2	9740	Intergenic	Intergenic	-2679	NM_007232	11255	Hs.251399	NM_007232	ENSG00000101180	HRH3	GPCR97|HH3R	histamine receptor H3	protein-coding	163.22	32.52	5.019065191	1.01E-46
chr20-3676	chr20	61762198	61763198	+	19.2	1000	Intergenic	Intergenic	-29027	NR_003245	768097	Hs.635159	NR_003245	ENSG00000231133	HAR1B	HAR1R|LINC00065|NCRNA00065	highly accelerated region 1B (non-protein coding)	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr20-3692	chr20	62732125	62735923	+	74.2	3798	Intergenic	CpG	4160	NM_005286	2832	Hs.248118	NM_005286	ENSG00000125522	NPBWR2	GPR8	neuropeptides B and W receptor 2	protein-coding	74.25	13.59	5.463576159	4.08E-24
chr20-3693	chr20	62739340	62744733	+	98.6	5393	Intergenic	Intergenic	-3852	NM_005286	2832	Hs.248118	NM_005286	ENSG00000125522	NPBWR2	GPR8	neuropeptides B and W receptor 2	protein-coding	98.57	19.9	4.953266332	8.64E-29
chr20-3694	chr20	62760958	62761958	+	19.2	1000	Intergenic	AluSc|SINE|Alu	-23274	NM_005286	2832	Hs.248118	NM_005286	ENSG00000125522	NPBWR2	GPR8	neuropeptides B and W receptor 2	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr20-3699	chr20	534781	536804	+	34.6	2023	Intergenic	L2a|LINE|L2	-11310	NM_001895	1457	Hs.644056	NM_001895	ENSG00000101266	CSNK2A1	CK2A1|CKII|CSNK2A3|OCNDS	casein kinase 2 alpha 1	protein-coding	34.56	5.34	6.471910112	9.27E-14
chr20-3700	chr20	547587	549507	+	33.3	1920	Intergenic	Intergenic	-24065	NM_001895	1457	Hs.644056	NM_001895	ENSG00000101266	CSNK2A1	CK2A1|CKII|CSNK2A3|OCNDS	casein kinase 2 alpha 1	protein-coding	33.28	1.94	17.15463918	2.91E-23
chr20-3703	chr20	614951	618882	+	56.3	3931	Intergenic	MER113|DNA|hAT-Charlie	17098	NM_080725	140809	Hs.516830	NM_080725	ENSG00000271303	SRXN1	C20orf139|Npn3|SRX|SRX1	sulfiredoxin 1	protein-coding	56.33	9.71	5.801235839	1.19E-19
chr20-3705	chr20	636784	641203	+	76.8	4419	Intergenic	Intergenic	-4979	NM_080725	140809	Hs.516830	NM_080725	ENSG00000271303	SRXN1	C20orf139|Npn3|SRX|SRX1	sulfiredoxin 1	protein-coding	76.81	17.96	4.276726058	8.34E-20
chr20-3706	chr20	652200	654751	+	57	2551	"intron (NM_033129, intron 1 of 1)"	"intron (NM_033129, intron 1 of 1)"	3348	NM_033129	85508	Hs.355284	NM_033129	ENSG00000215397	SCRT2	ZNF898B	scratch family transcriptional repressor 2	protein-coding	56.97	4.85	11.74639175	2.72E-31
chr20-3710	chr20	753866	757656	+	54.4	3790	Intergenic	Intergenic	-6533	NM_033409	113278	Hs.283865	NM_033409	ENSG00000101276	SLC52A3	BVVLS|BVVLS1|C20orf54|RFT2|RFVT3|bA371L19.1|hRFT2	solute carrier family 52 member 3	protein-coding	54.41	10.19	5.339548577	2.12E-17
chr20-3724	chr20	1527877	1528877	+	17.9	1000	"intron (NM_178460, intron 2 of 3)"	L1MB7|LINE|L1	9966	NM_178460	128646	Hs.729560	NM_178460	ENSG00000125900	SIRPD	PTPNS1L2|dJ576H24.4	signal regulatory protein delta	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-3736	chr20	2067634	2068634	+	16.6	1000	Intergenic	MER5A|DNA|hAT-Charlie	-14394	NM_080836	140901	Hs.100057	NM_080836	ENSG00000125834	STK35	CLIK1|STK35L1	serine/threonine kinase 35	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr20-3738	chr20	2171729	2177389	+	83.9	5660	Intergenic	Intergenic	-13015	NM_001287682	388780	Hs.132163	NM_001287682		LOC388780	-	uncharacterized LOC388780	protein-coding	83.85	17.47	4.799656554	1.09E-23
chr20-3748	chr20	2606067	2608878	+	49.9	2811	"intron (NM_080751, intron 17 of 19)"	LTR3B|LTR|ERVK	-25706	NM_006392	10528	Hs.376064	NM_006392	ENSG00000101361	NOP56	NOL5A|SCA36	NOP56 ribonucleoprotein	protein-coding	49.93	11.16	4.474014337	4.90E-14
chr20-375	chr20	38541161	38542413	+	27.5	1252	Intergenic	L2a|LINE|L2	-91316	NR_109936	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	27.52	6.31	4.36133122	6.42E-08
chr20-3751	chr20	2658161	2660322	+	41	2161	Intergenic	HERVL40-int|LTR|ERVL	-14283	NM_001110514	57593	Hs.471955	NM_020833	ENSG00000088881	EBF4	COE4|O/E-4	early B-cell factor 4	protein-coding	40.97	9.22	4.443600868	9.99E-12
chr20-3761	chr20	4086278	4089051	+	42.9	2773	Intergenic	AluSg|SINE|Alu	-41762	NM_175840	54498	Hs.433337	NM_175839	ENSG00000088826	SMOX	C20orf16|PAO|PAO-1|PAO1|PAOH|PAOH1|SMO	spermine oxidase	protein-coding	42.89	9.71	4.417095778	8.16E-12
chr20-3765	chr20	4308850	4310718	+	37.1	1868	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-80125	NM_000678	146	Hs.557	NM_000678	ENSG00000171873	ADRA1D	ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2	adrenoceptor alpha 1D	protein-coding	37.12	7.77	4.777348777	1.66E-11
chr20-3768	chr20	4490376	4491941	+	28.2	1565	Intergenic	Intergenic	-175639	NM_001080121	5621	Hs.472010	NM_000311	ENSG00000171867	PRNP	ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30	prion protein	protein-coding	28.16	5.34	5.27340824	7.39E-10
chr20-377	chr20	42712864	42716947	+	76.8	4083	Intergenic	Intergenic	101313	NM_175913	57158	Hs.441737	NM_020433	ENSG00000149596	JPH2	CMH17|JP-2|JP2	junctophilin 2	protein-coding	76.81	11.16	6.882616487	6.20E-30
chr20-3790	chr20	6665089	6666562	+	25.6	1473	Intergenic	Intergenic	-82920	NM_001200	650	Hs.73853	NM_001200	ENSG00000125845	BMP2	BDA2|BMP2A	bone morphogenetic protein 2	protein-coding	25.6	5.34	4.794007491	2.00E-08
chr20-3791	chr20	6692357	6693357	+	17.9	1000	Intergenic	Intergenic	-55888	NM_001200	650	Hs.73853	NM_001200	ENSG00000125845	BMP2	BDA2|BMP2A	bone morphogenetic protein 2	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-38	chr20	45101243	45103060	+	51.8	1817	Intergenic	L1ME3B|LINE|L1	-8220	NR_026640	7686	Hs.717103	NR_026640		MKRN7P	MKRNP3|ZNF127L5|dJ981L23.2	"makorin ring finger protein 7, pseudogene"	pseudo	51.85	11.16	4.646057348	1.06E-14
chr20-3804	chr20	10111725	10113131	+	24.3	1406	"intron (NR_040710, intron 2 of 4)"	"intron (NR_040710, intron 2 of 4)"	-87018	NM_003081	6616	Hs.167317	NM_003081	ENSG00000132639	SNAP25	CMS18|RIC-4|RIC4|SEC9|SNAP|SNAP-25|SUP|bA416N4.2|dJ1068F16.2	synaptosome associated protein 25	protein-coding	24.32	2.91	8.357388316	5.77E-12
chr20-3806	chr20	10234801	10236085	+	22.4	1284	"intron (NM_001322908, intron 3 of 9)"	"intron (NM_001322908, intron 3 of 9)"	-35289	NR_040710	100131208	Hs.658178	NR_040710	ENSG00000227906	SNAP25-AS1	-	SNAP25 antisense RNA 1	ncRNA	22.4	3.4	6.588235294	3.73E-09
chr20-3808	chr20	10315646	10316646	+	17.9	1000	Intergenic	AluSz6|SINE|Alu	96427	NM_018848	8195	Hs.472119	NM_018848	ENSG00000125863	MKKS	BBS6|HMCS|KMS|MKS	McKusick-Kaufman syndrome	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr20-3812	chr20	11187784	11191647	+	59.5	3863	Intergenic	Intergenic	64316	NR_038972	339593	Hs.434320	NR_038972		LOC339593	-	uncharacterized LOC339593	ncRNA	59.53	9.71	6.130792997	3.28E-21
chr20-3813	chr20	11198544	11200126	+	26.2	1582	Intergenic	Intergenic	54696	NR_038972	339593	Hs.434320	NR_038972		LOC339593	-	uncharacterized LOC339593	ncRNA	26.24	4.37	6.004576659	7.40E-10
chr20-3818	chr20	12944870	12946126	+	20.5	1256	Intergenic	Intergenic	-12331	NR_109868	101929486	Hs.548761	NR_109868	ENSG00000233048	LINC01722	-	long intergenic non-protein coding RNA 1722	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr20-3822	chr20	13279594	13280594	+	17.9	1000	"exon (NM_080826, exon 6 of 6)"	"exon (NM_080826, exon 6 of 6)"	-59760	NR_040043	100505536	Hs.665253	NR_040043		ISM1-AS1	-	ISM1 antisense RNA 1	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr20-3824	chr20	13831864	13833163	+	18.6	1299	"intron (NM_001271539, intron 16 of 17)"	"intron (NM_001271539, intron 16 of 17)"	66841	NR_029377	79133	Hs.472165	NM_024120	ENSG00000101247	NDUFAF5	C20orf7|bA526K24.2|dJ842G6.1	NADH:ubiquinone oxidoreductase complex assembly factor 5	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr20-3834	chr20	16707668	16709526	+	32.6	1858	Intergenic	Intergenic	-2012	NM_003092	6629	Hs.280378	NM_003092	ENSG00000125870	SNRPB2	Msl1|U2B''	small nuclear ribonucleoprotein polypeptide B2	protein-coding	32.64	5.82	5.608247423	2.32E-11
chr20-3839	chr20	17707897	17708897	+	18.6	1000	"intron (NM_001014977, intron 2 of 2)"	AluJb|SINE|Alu	27804	NM_001014977	140836	Hs.115366	NM_178477	ENSG00000125888	BANF2	BAF-L|BAF2|BAFL|C20orf179	barrier to autointegration factor 2	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr20-384	chr20	48166531	48167531	+	25	1000	"intron (NM_000961, intron 1 of 9)"	MER4C|LTR|ERV1	17676	NM_000961	5740	Hs.302085	NM_000961	ENSG00000124212	PTGIS	CYP8|CYP8A1|PGIS|PTGI	prostaglandin I2 synthase	protein-coding	24.96	5.82	4.288659794	3.56E-07
chr20-3846	chr20	19757635	19758635	+	17.9	1000	Intergenic	Intergenic	-109030	NM_001242581	54453	Hs.472270	NM_018993	ENSG00000132669	RIN2	MACS|RASSF4	Ras and Rab interactor 2	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-3849	chr20	20087554	20088554	+	17.9	1000	"intron (NM_001167816, intron 7 of 12)"	"intron (NM_001167816, intron 7 of 12)"	50764	NM_001167816	26074	Hs.729168	NM_015585	ENSG00000089101	CFAP61	C20orf26|CaM-IP3|dJ1002M8.3|dJ1178H5.4	cilia and flagella associated protein 61	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-3858	chr20	20846896	20847896	+	17.3	1000	Intergenic	Intergenic	-154130	NM_020343	57186	Hs.472285	NM_020343	ENSG00000188559	RALGAPA2	AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220	Ral GTPase activating protein catalytic alpha subunit 2	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr20-3866	chr20	21473386	21474386	+	17.9	1000	Intergenic	Intergenic	20778	NM_002509	4821	Hs.516922	NM_002509	ENSG00000125820	NKX2-2	NKX2.2|NKX2B	NK2 homeobox 2	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-3871	chr20	21680834	21683483	+	44.8	2649	"intron (NR_109878, intron 1 of 4)"	"intron (NR_109878, intron 1 of 4)"	2065	NR_109878	101929608	Hs.694665	NR_109878	ENSG00000280350	LINC01726	-	long intergenic non-protein coding RNA 1726	ncRNA	44.81	5.82	7.699312715	1.25E-19
chr20-3875	chr20	22193249	22194249	+	18.6	1000	Intergenic	Intergenic	69690	NR_110615	101929663	Hs.143562	NR_110615	ENSG00000225321	LINC01427	-	long intergenic non-protein coding RNA 1427	ncRNA	18.56	4.37	4.247139588	1.41E-05
chr20-3886	chr20	23012784	23014620	+	32.6	1836	Intergenic	Intergenic	-2355	NM_001052	6754	Hs.673846	NM_001052	ENSG00000132671	SSTR4	SS-4-R|SS4-R|SS4R	somatostatin receptor 4	protein-coding	32.64	5.82	5.608247423	2.32E-11
chr20-3894	chr20	24443584	24446490	+	52.5	2906	Intergenic	Intergenic	-4798	NM_024893	79953	Hs.124638	NM_024893	ENSG00000101463	SYNDIG1	C20orf39|DSPC2|IFITMD5|TMEM90B	synapse differentiation inducing 1	protein-coding	52.49	12.13	4.327287716	3.28E-14
chr20-3898	chr20	24587337	24588692	+	22.4	1355	"intron (NM_024893, intron 3 of 3)"	AluSx|SINE|Alu	137572	NM_001323607	79953	Hs.124638	NM_024893	ENSG00000101463	SYNDIG1	C20orf39|DSPC2|IFITMD5|TMEM90B	synapse differentiation inducing 1	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr20-3922	chr20	30028987	30029987	+	16.6	1000	"intron (NM_153324, intron 1 of 1)"	"intron (NM_153324, intron 1 of 1)"	1165	NR_126450	245936	Hs.122509	NM_153324	ENSG00000180424	DEFB123	DEFB-23|DEFB23|ESC42-RELD	defensin beta 123	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-3926	chr20	30630937	30631937	+	17.9	1000	Intergenic	L1MB8|LINE|L1	-8554	NM_001172131	3055	Hs.655210	NM_002110	ENSG00000101336	HCK	JTK9|p59Hck|p61Hck	"HCK proto-oncogene, Src family tyrosine kinase"	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr20-3927	chr20	30639107	30640770	+	32.6	1663	promoter-TSS (NM_001172131)	promoter-TSS (NM_001172131)	-53	NM_001172131	3055	Hs.655210	NM_002110	ENSG00000101336	HCK	JTK9|p59Hck|p61Hck	"HCK proto-oncogene, Src family tyrosine kinase"	protein-coding	32.64	6.31	5.17274168	1.20E-10
chr20-3930	chr20	31650636	31652029	+	21.8	1393	"intron (NM_182658, intron 5 of 14)"	"intron (NM_182658, intron 5 of 14)"	8195	NM_182658	359710	Hs.472442	NM_182658	ENSG00000186190	BPIFB3	C20orf185|LPLUNC3|RYA3	BPI fold containing family B member 3	protein-coding	21.76	5.34	4.074906367	1.97E-06
chr20-3939	chr20	31871651	31873082	+	22.4	1431	"intron (NM_033197, intron 1 of 15)"	"intron (NM_033197, intron 1 of 15)"	1425	NM_033197	92747	Hs.65551	NM_033197	ENSG00000125999	BPIFB1	C20orf114|LPLUNC1	BPI fold containing family B member 1	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr20-3941	chr20	32067021	32068021	+	17.3	1000	Intergenic	L2a|LINE|L2	-10407	NM_001032999	9139	Hs.153934	NM_005093	ENSG00000078699	CBFA2T2	EHT|MTGR1|ZMYND3|p85	CBFA2/RUNX1 translocation partner 2	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr20-3953	chr20	34642559	34643559	+	18.6	1000	Intergenic	L2b|LINE|L2	-4177	NR_027451	647979	Hs.743232	NR_027451	ENSG00000260032	NORAD	LINC00657	non-coding RNA activated by DNA damage	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr20-396	chr20	56617914	56621631	+	68.5	3717	Intergenic	Intergenic	-106211	NM_178456	128602	Hs.43977	NM_178456	ENSG00000124237	C20orf85	LLC1|bA196N14.1	chromosome 20 open reading frame 85	protein-coding	68.49	9.22	7.428416486	5.67E-28
chr20-3964	chr20	34968078	34969402	+	23	1324	"intron (NM_014902, intron 1 of 12)"	"intron (NM_014902, intron 1 of 12)"	74495	NM_014902	22839	Hs.249600	NM_014902	ENSG00000080845	DLGAP4	DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4	DLG associated protein 4	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr20-3965	chr20	34991272	34992272	+	18.6	1000	"intron (NM_014902, intron 1 of 12)"	L2a|LINE|L2	97527	NM_014902	22839	Hs.249600	NM_014902	ENSG00000080845	DLGAP4	DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4	DLG associated protein 4	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr20-3967	chr20	36042616	36045677	+	42.9	3061	Intergenic	Intergenic	69615	NM_198291	6714	Hs.195659	NM_005417	ENSG00000197122	SRC	ASV|SRC1|THC6|c-SRC|p60-Src	"SRC proto-oncogene, non-receptor tyrosine kinase"	protein-coding	42.89	7.77	5.51994852	2.23E-14
chr20-3970	chr20	36512689	36513689	+	17.3	1000	Intergenic	Intergenic	-18310	NM_080607	128434	Hs.517029	NM_080607	ENSG00000132821	VSTM2L	C20orf102|dJ1118M15.2	V-set and transmembrane domain containing 2 like	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr20-3974	chr20	36816792	36821151	+	72.3	4359	Intergenic	L3|LINE|CR1	-23991	NM_001323316	7052	Hs.517033	NM_004613	ENSG00000198959	TGM2	TG(C)|TGC	transglutaminase 2	protein-coding	72.33	16.5	4.383636364	6.87E-19
chr20-3977	chr20	36889943	36892274	+	44.2	2331	"intron (NR_104170, intron 1 of 1)"	L2c|LINE|L2	-1934	NM_001029864	85449	Hs.472690	NM_001029864	ENSG00000149633	KIAA1755	-	KIAA1755	protein-coding	44.17	8.74	5.053775744	1.04E-13
chr20-3987	chr20	37334448	37335448	+	17.9	1000	Intergenic	MIRc|SINE|MIR	-18157	NM_080552	140679	Hs.179080	NM_080552	ENSG00000101438	SLC32A1	VGAT|VIAAT	solute carrier family 32 member 1	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr20-399	chr20	57643433	57644730	+	37.1	1297	Intergenic	Intergenic	-26180	NM_016045	51012	Hs.656865	NM_016045	ENSG00000101166	PRELID3B	C20orf45|SLMO2|dJ543J19.5	PRELI domain containing 3B	protein-coding	37.12	6.8	5.458823529	7.17E-13
chr20-3992	chr20	38751740	38753004	+	21.8	1264	Intergenic	L2|LINE|L2	119269	NR_109937	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	21.76	4.85	4.486597938	5.54E-07
chr20-4	chr20	46523368	46525190	+	139.5	1822	Intergenic	D20S16|Satellite|Satellite	-87691	NR_109942	101060004	Hs.129970	NR_109942		LINC01523	-	long intergenic non-protein coding RNA 1523	ncRNA	139.54	32.04	4.355181024	3.20E-35
chr20-4008	chr20	40265689	40267008	+	23.7	1319	Intergenic	AluJr|SINE|Alu	-19215	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	23.68	3.4	6.964705882	5.45E-10
chr20-4016	chr20	40561775	40562775	+	17.3	1000	Intergenic	MSTB|LTR|ERVL-MaLR	-315142	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr20-4022	chr20	41724378	41726648	+	41	2270	"intron (NM_007050, intron 1 of 30)"	"intron (NM_007050, intron 1 of 30)"	93044	NM_007050	11122	Hs.526879	NM_007050	ENSG00000196090	PTPRT	RPTPrho	"protein tyrosine phosphatase, receptor type T"	protein-coding	40.97	7.28	5.627747253	2.23E-14
chr20-4023	chr20	41792806	41793806	+	18.6	1000	"intron (NM_007050, intron 1 of 30)"	MER58B|DNA|hAT-Charlie	25251	NM_007050	11122	Hs.526879	NM_007050	ENSG00000196090	PTPRT	RPTPrho	"protein tyrosine phosphatase, receptor type T"	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr20-4026	chr20	41824787	41825787	+	17.9	1000	Intergenic	AluSz6|SINE|Alu	-6730	NM_133170	11122	Hs.526879	NM_007050	ENSG00000196090	PTPRT	RPTPrho	"protein tyrosine phosphatase, receptor type T"	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-4027	chr20	41883331	41884583	+	17.3	1252	Intergenic	Intergenic	-65400	NM_133170	11122	Hs.526879	NM_007050	ENSG00000196090	PTPRT	RPTPrho	"protein tyrosine phosphatase, receptor type T"	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr20-4030	chr20	42393609	42395921	+	44.2	2312	Intergenic	Intergenic	-39123	NM_176791	149699	Hs.447626	NM_176791	ENSG00000124196	GTSF1L	C20orf65|FAM112A|dJ1028D15.4	gametocyte specific factor 1 like	protein-coding	44.17	5.34	8.271535581	7.25E-20
chr20-4033	chr20	42454348	42456212	+	36.5	1864	Intergenic	L1MB2|LINE|L1	-68078	NR_134577	105372626	Hs.130555	NR_134577	ENSG00000233277	LINC01728	-	long intergenic non-protein coding RNA 1728	ncRNA	36.48	5.82	6.268041237	1.09E-13
chr20-4036	chr20	42490828	42492325	+	26.2	1497	Intergenic	AluJr4|SINE|Alu	-31782	NR_134577	105372626	Hs.130555	NR_134577	ENSG00000233277	LINC01728	-	long intergenic non-protein coding RNA 1728	ncRNA	26.24	2.43	10.79835391	2.44E-14
chr20-4038	chr20	42513534	42514785	+	20.5	1251	Intergenic	HAL1|LINE|L1	-9199	NR_134577	105372626	Hs.130555	NR_134577	ENSG00000233277	LINC01728	-	long intergenic non-protein coding RNA 1728	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr20-4050	chr20	42858019	42859303	+	23	1284	Intergenic	Intergenic	-17078	NM_001256738	78997	Hs.517059	NM_024034	ENSG00000124194	GDAP1L1	dJ881L22.1|dJ995J12.1.1	ganglioside induced differentiation associated protein 1 like 1	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr20-4052	chr20	42939968	42942825	+	48	2857	Intergenic	Intergenic	-1504	NM_001080472	128486	Hs.632269	NM_001080472	ENSG00000197296	FITM2	C20orf142|Fit2|dJ881L22.2	fat storage inducing transmembrane protein 2	protein-coding	48.01	7.28	6.59478022	2.47E-18
chr20-4072	chr20	43742528	43743528	+	17.9	1000	"intron (NM_145652, intron 1 of 3)"	"intron (NM_145652, intron 1 of 3)"	785	NM_145652	149708	Hs.375031	NM_145652	ENSG00000175121	WFDC5	PRG5|WAP1|dJ211D12.5	WAP four-disulfide core domain 5	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-4079	chr20	43974010	43975824	+	29.4	1814	"intron (NM_002999, intron 1 of 4)"	"intron (NM_002999, intron 1 of 4)"	2147	NM_002999	6385	Hs.632267	NM_002999	ENSG00000124145	SDC4	SYND4	syndecan 4	protein-coding	29.44	5.82	5.058419244	6.85E-10
chr20-4081	chr20	44098355	44100472	+	47.4	2117	"intron (NM_006103, intron 2 of 3)"	CpG-16696	1019	NM_006103	10406	Hs.2719	NM_006103	ENSG00000101443	WFDC2	EDDM4|HE4|WAP5|dJ461P17.6	WAP four-disulfide core domain 2	protein-coding	47.37	5.34	8.870786517	1.12E-22
chr20-4090	chr20	44795339	44796339	+	18.6	1000	Intergenic	MLT1J|LTR|ERVL-MaLR	48946	NM_001322422	958	Hs.472860	NM_001250	ENSG00000101017	CD40	Bp50|CDW40|TNFRSF5|p50	CD40 molecule	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr20-4111	chr20	45558527	45560029	+	28.8	1502	"intron (NM_005244, intron 1 of 15)"	"intron (NM_005244, intron 1 of 15)"	36015	NM_172110	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding	28.8	4.37	6.590389016	1.84E-11
chr20-4115	chr20	45755874	45756874	+	17.9	1000	"intron (NM_005244, intron 9 of 15)"	"intron (NM_005244, intron 9 of 15)"	-39235	NR_037410	100500814		NR_037410	ENSG00000264901	MIR3616	mir-3616	microRNA 3616	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr20-4117	chr20	46438604	46439604	+	18.6	1000	Intergenic	Intergenic	-23744	NM_198596	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr20-4120	chr20	46503591	46505309	+	30.1	1718	Intergenic	Intergenic	-89090	NM_198596	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding	30.08	6.8	4.423529412	1.16E-08
chr20-4121	chr20	46509366	46510670	+	26.2	1304	Intergenic	L1MB7|LINE|L1	-94658	NM_198596	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding	26.24	4.37	6.004576659	7.40E-10
chr20-4127	chr20	46919587	46920587	+	16.6	1000	Intergenic	Intergenic	-68567	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr20-4133	chr20	47186989	47190509	+	67.8	3520	Intergenic	MER113A|DNA|hAT-Charlie	200095	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	67.85	11.65	5.824034335	2.12E-23
chr20-4137	chr20	47225228	47226228	+	17.9	1000	Intergenic	Intergenic	218692	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr20-4141	chr20	47360942	47363254	+	35.2	2312	"intron (NM_020820, intron 2 of 39)"	"intron (NM_020820, intron 2 of 39)"	82322	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	35.2	5.82	6.048109966	6.75E-13
chr20-4149	chr20	47984829	47985829	+	17.9	1000	"3' UTR (NM_004975, exon 2 of 2)"	"3' UTR (NM_004975, exon 2 of 2)"	88109	NR_003030	692057		NR_003030	ENSG00000212304	SNORD12	HBII-99|MIR1259|MIRN1259	"small nucleolar RNA, C/D box 12"	snoRNA	17.92	2.43	7.374485597	1.53E-08
chr20-4161	chr20	48364418	48365418	+	17.9	1000	Intergenic	MIR|SINE|MIR	-34497	NM_004776	9334	Hs.370487	NM_004776	ENSG00000158470	B4GALT5	B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V	"beta-1,4-galactosyltransferase 5"	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-4172	chr20	49109172	49110172	+	18.6	1000	Intergenic	Intergenic	-17186	NM_002827	5770	Hs.417549	NM_002827	ENSG00000196396	PTPN1	PTP1B	"protein tyrosine phosphatase, non-receptor type 1"	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr20-4177	chr20	49289359	49290997	+	28.8	1638	"intron (NM_001290268, intron 1 of 21)"	"intron (NM_001290268, intron 1 of 21)"	17889	NR_110890	140876	Hs.372578	NM_080829	ENSG00000042062	FAM65C	C20orf175|C20orf176	family with sequence similarity 65 member C	protein-coding	28.8	2.43	11.85185185	1.88E-16
chr20-4181	chr20	49589410	49590410	+	17.9	1000	Intergenic	Intergenic	14559	NM_014484	27304	Hs.159410	NM_014484	ENSG00000124217	MOCS3	UBA4	molybdenum cofactor synthesis 3	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-4182	chr20	49596992	49597992	+	17.9	1000	Intergenic	L2a|LINE|L2	22141	NM_014484	27304	Hs.159410	NM_014484	ENSG00000124217	MOCS3	UBA4	molybdenum cofactor synthesis 3	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr20-4190	chr20	49758291	49759291	+	18.6	1000	Intergenic	MER102a|DNA|hAT-Charlie	-119116	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr20-4200	chr20	51614234	51615234	+	18.6	1000	"intron (NM_173485, intron 1 of 2)"	AluSx1|SINE|Alu	25788	NM_173485	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr20-4201	chr20	51681991	51684179	+	34.6	2188	"intron (NM_173485, intron 1 of 2)"	AluSc|SINE|Alu	94139	NM_173485	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	34.56	6.8	5.082352941	2.10E-11
chr20-4206	chr20	51878713	51884051	+	87.7	5338	"intron (NM_001193421, intron 2 of 2)"	"intron (NM_001193421, intron 2 of 2)"	79560	NM_001193421	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	87.69	16.02	5.473782772	7.53E-28
chr20-4214	chr20	52623677	52624677	+	18.6	1000	"intron (NM_001316361, intron 4 of 9)"	"intron (NM_001316361, intron 4 of 9)"	51382	NM_001323347	8537	Hs.400556	NM_003657	ENSG00000064787	BCAS1	AIBC1|NABC1	breast carcinoma amplified sequence 1	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr20-4216	chr20	52711793	52712793	+	17.9	1000	Intergenic	AluSq|SINE|Alu	-24989	NM_001316361	8537	Hs.400556	NM_003657	ENSG00000064787	BCAS1	AIBC1|NABC1	breast carcinoma amplified sequence 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-4221	chr20	52873758	52874758	+	17.9	1000	Intergenic	MER5A1|DNA|hAT-Charlie	49756	NM_002623	5203	Hs.91161	NM_002623	ENSG00000101132	PFDN4	C1|PFD4	prefoldin subunit 4	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-4225	chr20	53269841	53271402	+	24.3	1561	Intergenic	Intergenic	178364	NM_177959	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr20-4227	chr20	53956787	53957787	+	18.6	1000	Intergenic	Intergenic	-82294	NR_110629	102723578	Hs.446269	NR_110629	ENSG00000235166	LINC01440	-	long intergenic non-protein coding RNA 1440	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr20-4228	chr20	54702493	54703824	+	21.1	1331	Intergenic	Intergenic	-120630	NM_019888	4159	Hs.248018	NM_019888	ENSG00000124089	MC3R	BMIQ9|MC3|MC3-R|OB20|OQTL	melanocortin 3 receptor	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr20-4231	chr20	55162183	55165209	+	39.7	3026	"intron (NR_136537, intron 4 of 5)"	AluY|SINE|Alu	11077	NR_136537	105372682	Hs.517135	NR_136537	ENSG00000225657	LINC01716	-	long intergenic non-protein coding RNA 1716	ncRNA	39.69	6.8	5.836764706	2.14E-14
chr20-4244	chr20	55644709	55648802	+	87.7	4093	Intergenic	CT-rich|Low_complexity|Low_complexity	-141997	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	87.69	16.99	5.161271336	1.95E-26
chr20-425	chr20	62128722	62131980	+	54.4	3258	"intron (NM_001958, intron 1 of 7)"	"intron (NM_001958, intron 1 of 7)"	317	NM_001958	1917	Hs.433839	NM_001958	ENSG00000101210	EEF1A2	EEF1AL|EF-1-alpha-2|EF1A|EIEE33|HS1|MRD38|STN|STNL	eukaryotic translation elongation factor 1 alpha 2	protein-coding	54.41	5.82	9.348797251	3.64E-26
chr20-4256	chr20	55996127	55997127	+	17.9	1000	Intergenic	L2b|LINE|L2	30173	NM_001291780	55544	Hs.236361	NM_017495	ENSG00000132819	RBM38	HSRNASEB|RNPC1|SEB4B|SEB4D|dJ800J21.2	RNA binding motif protein 38	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-4259	chr20	56054124	56055124	+	17.9	1000	Intergenic	Intergenic	45299	NM_001269041	140690	Hs.131543	NM_080618	ENSG00000124092	CTCFL	BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2	CCCTC-binding factor like	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-4264	chr20	56163846	56165406	+	26.9	1560	Intergenic	Intergenic	28489	NM_002591	5105	Hs.1872	NM_002591	ENSG00000124253	PCK1	PEPCK-C|PEPCK1|PEPCKC	phosphoenolpyruvate carboxykinase 1	protein-coding	26.88	4.85	5.542268041	7.61E-10
chr20-4266	chr20	56183824	56187306	+	57	3482	"intron (NR_136660, intron 5 of 7)"	"intron (NR_136660, intron 5 of 7)"	10067	NM_001160419	81030	Hs.302123	NM_030776	ENSG00000124256	ZBP1	C20orf183|DAI|DLM-1|DLM1	Z-DNA binding protein 1	protein-coding	56.97	10.68	5.334269663	3.77E-18
chr20-4271	chr20	56260878	56268576	+	144.7	7698	"intron (NM_199171, intron 1 of 3)"	"intron (NM_199171, intron 1 of 3)"	953	NM_001255976	56937	Hs.517155	NM_020182	ENSG00000124225	PMEPA1	STAG1|TMEPAI	"prostate transmembrane protein, androgen induced 1"	protein-coding	144.66	27.18	5.322295806	2.96E-44
chr20-4276	chr20	56287089	56288643	+	25.6	1554	TTS (NR_131157)	TTS (NR_131157)	-1274	NM_199171	56937	Hs.517155	NM_020182	ENSG00000124225	PMEPA1	STAG1|TMEPAI	"prostate transmembrane protein, androgen induced 1"	protein-coding	25.6	5.34	4.794007491	2.00E-08
chr20-4286	chr20	56478781	56479781	+	17.3	1000	Intergenic	Tigger2a|DNA|TcMar-Tigger	8831	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr20-4288	chr20	56653923	56654923	+	17.3	1000	Intergenic	Charlie5|DNA|hAT-Charlie	-71560	NM_178456	128602	Hs.43977	NM_178456	ENSG00000124237	C20orf85	LLC1|bA196N14.1	chromosome 20 open reading frame 85	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr20-4299	chr20	57148315	57153189	+	74.9	4874	"intron (NR_034147, intron 6 of 6)"	"intron (NR_034147, intron 6 of 6)"	-59076	NR_125359	79160	Hs.280135	NR_125359	ENSG00000268941	LINC01711	-	long intergenic non-protein coding RNA 1711	ncRNA	74.89	17.96	4.169821826	1.52E-18
chr20-430	chr20	2311920	2317490	+	103.1	5570	"intron (NM_003245, intron 10 of 12)"	"intron (NM_003245, intron 10 of 12)"	38092	NM_003245	7053	Hs.2022	NM_003245	ENSG00000125780	TGM3	TGE	transglutaminase 3	protein-coding	103.05	25.24	4.082805071	1.95E-24
chr20-4333	chr20	57945235	57952980	+	110.7	7745	Intergenic	FLAM_C|SINE|Alu	73625	NM_207032	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	110.73	21.84	5.070054945	1.80E-32
chr20-4337	chr20	57989016	57990016	+	17.9	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	114034	NM_207032	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-4351	chr20	58277286	58278286	+	17.9	1000	"intron (NM_001199506, intron 1 of 12)"	"intron (NM_001199506, intron 1 of 12)"	-18479	NM_183246	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-4353	chr20	58315241	58317106	+	31.4	1865	"intron (NM_183246, intron 1 of 11)"	"intron (NM_183246, intron 1 of 11)"	19908	NM_183244	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	31.36	3.88	8.082474227	3.25E-14
chr20-4361	chr20	59280349	59281349	+	17.9	1000	Intergenic	L1MC3|LINE|L1	141229	NR_039653	100616440		NR_039653	ENSG00000265617	MIR548AG2	-	microRNA 548ag-2	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr20-4378	chr20	59565297	59568320	+	57.6	3023	Intergenic	Intergenic	-87312	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	57.61	10.68	5.394194757	6.95E-19
chr20-4392	chr20	59979788	59980788	+	19.8	1000	"intron (NM_001794, intron 2 of 15)"	"intron (NM_001794, intron 2 of 15)"	-94189	NM_001252338	1002	Hs.473231	NM_001794	ENSG00000179242	CDH4	CAD4|R-CAD|RCAD	cadherin 4	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr20-4400	chr20	61004031	61005031	+	17.9	1000	Intergenic	MER66B|LTR|ERV1	-1902	NM_080833	140893	Hs.180374	NM_080833	ENSG00000130701	RBBP8NL	C20orf151	RBBP8 N-terminal like	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-4401	chr20	61007464	61017346	+	167.1	9882	Intergenic	Intergenic	-9776	NM_080833	140893	Hs.180374	NM_080833	ENSG00000130701	RBBP8NL	C20orf151	RBBP8 N-terminal like	protein-coding	167.06	34.46	4.84793964	3.22E-46
chr20-4407	chr20	61176800	61180339	+	65.3	3539	Intergenic	Intergenic	16450	NR_029676	406923		NR_029676	ENSG00000174407	MIR133A2	MIRN133A2|mir-133a-2	microRNA 133a-2	ncRNA	65.29	9.22	7.081344902	3.03E-26
chr20-4412	chr20	61447237	61452334	+	115.2	5097	"intron (NM_001853, intron 2 of 31)"	"intron (NM_001853, intron 2 of 31)"	1371	NM_001853	1299	Hs.716639	NM_001853	ENSG00000092758	COL9A3	DJ885L7.4.1|EDM3|IDD|MED	collagen type IX alpha 3 chain	protein-coding	115.21	23.3	4.944635193	2.67E-33
chr20-4414	chr20	61626436	61627724	+	21.1	1288	Intergenic	L1ME1|LINE|L1	11307	NM_080606	128408	Hs.551230	NM_080606	ENSG00000125533	BHLHE23	BETA4|BHLHB4|Beta3b|bA305P22.3	basic helix-loop-helix family member e23	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr20-4428	chr20	62032645	62033645	+	17.9	1000	"3' UTR (NM_004518, exon 15 of 15)"	"3' UTR (NM_004518, exon 15 of 15)"	-40397	NM_001256573	1137	Hs.10734	NM_000744	ENSG00000101204	CHRNA4	BFNC|EBN|EBN1|NACHR|NACHRA4|NACRA4	cholinergic receptor nicotinic alpha 4 subunit	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr20-4440	chr20	62433502	62434502	+	17.3	1000	"intron (NM_025224, intron 1 of 4)"	CpG	2854	NM_025224	140685	Hs.585028	NM_025224	ENSG00000130584	ZBTB46	BTBD4|BZEL|RINZF|ZNF340|dJ583P15.7|dJ583P15.8	zinc finger and BTB domain containing 46	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr20-4455	chr20	562862	563862	+	17.9	1000	Intergenic	AluJr|SINE|Alu	27548	NM_004609	6939	Hs.437	NM_004609	ENSG00000125878	TCF15	EC2|PARAXIS|bHLHa40	transcription factor 15 (basic helix-loop-helix)	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr20-4456	chr20	568902	569902	+	17.9	1000	Intergenic	MER113|DNA|hAT-Charlie	21508	NM_004609	6939	Hs.437	NM_004609	ENSG00000125878	TCF15	EC2|PARAXIS|bHLHa40	transcription factor 15 (basic helix-loop-helix)	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr20-4465	chr20	766114	768674	+	38.4	2560	Intergenic	HERVIP10F-int|LTR|ERV1	-18166	NM_033409	113278	Hs.283865	NM_033409	ENSG00000101276	SLC52A3	BVVLS|BVVLS1|C20orf54|RFT2|RFVT3|bA371L19.1|hRFT2	solute carrier family 52 member 3	protein-coding	38.4	9.22	4.164859002	1.94E-10
chr20-4486	chr20	1617477	1618477	+	17.9	1000	"non-coding (NR_110090, exon 2 of 3)"	"non-coding (NR_110090, exon 2 of 3)"	3823	NR_110090	101929010	Hs.570358	NR_110090	ENSG00000237914	SIRPG-AS1	-	SIRPG antisense RNA 1	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr20-4489	chr20	1762867	1764549	+	29.4	1682	Intergenic	L2a|LINE|L2	-3316	NR_037142	100289473	Hs.641525	NR_037142	ENSG00000232528	LOC100289473	-	cytoskeleton associated protein 2-like pseudogene	pseudo	29.44	4.85	6.070103093	2.13E-11
chr20-4503	chr20	2001789	2002789	+	16.6	1000	Intergenic	AluY|SINE|Alu	-27358	NM_024411	5173	Hs.22584	NM_024411	ENSG00000101327	PDYN	ADCA|PENKB|SCA23	prodynorphin	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr20-4529	chr20	2534989	2535989	+	17.3	1000	"intron (NM_080751, intron 2 of 19)"	L1MC2|LINE|L1	18236	NM_080751	117532	Hs.352626	NM_080751	ENSG00000149488	TMC2	C20orf145	transmembrane channel like 2	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr20-4536	chr20	2730242	2737003	+	129.9	6761	"intron (NR_138537, intron 15 of 17)"	CpG-16338	47670	NM_019609	56265	Hs.659346	NM_019609	ENSG00000088882	CPXM1	CPX1|CPXM	"carboxypeptidase X, M14 family member 1"	protein-coding	129.94	26.21	4.957649752	4.60E-37
chr20-4537	chr20	2739496	2740922	+	21.8	1426	"non-coding (NR_138537, exon 18 of 18)"	"non-coding (NR_138537, exon 18 of 18)"	41083	NM_019609	56265	Hs.659346	NM_019609	ENSG00000088882	CPXM1	CPX1|CPXM	"carboxypeptidase X, M14 family member 1"	protein-coding	21.76	3.4	6.4	3.73E-09
chr20-4538	chr20	2749015	2750588	+	25	1573	Intergenic	AluJr|SINE|Alu	31491	NM_019609	56265	Hs.659346	NM_019609	ENSG00000088882	CPXM1	CPX1|CPXM	"carboxypeptidase X, M14 family member 1"	protein-coding	24.96	3.4	7.341176471	7.55E-11
chr20-4543	chr20	3387006	3388006	+	16	1000	"intron (NM_001009984, intron 1 of 36)"	"intron (NM_001009984, intron 1 of 36)"	803	NM_001009984	25943	Hs.516853	NM_001009984	ENSG00000088854	C20orf194	-	chromosome 20 open reading frame 194	protein-coding	16	3.4	4.705882353	2.25E-05
chr20-455	chr20	37370443	37372205	+	34.6	1762	Intergenic	Intergenic	-5773	NM_024855	79913	Hs.371585	NM_024855	ENSG00000101442	ACTR5	Arp5|INO80M	ARP5 actin-related protein 5 homolog	protein-coding	34.56	8.25	4.189090909	1.34E-09
chr20-4550	chr20	4138304	4139304	+	17.9	1000	"intron (NM_175842, intron 1 of 8)"	AluY|SINE|Alu	9378	NM_175841	54498	Hs.433337	NM_175839	ENSG00000088826	SMOX	C20orf16|PAO|PAO-1|PAO1|PAOH|PAOH1|SMO	spermine oxidase	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr20-4552	chr20	4298524	4299524	+	16.6	1000	Intergenic	MLT1L|LTR|ERVL-MaLR	-69365	NM_000678	146	Hs.557	NM_000678	ENSG00000171873	ADRA1D	ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2	adrenoceptor alpha 1D	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr20-4567	chr20	5262679	5263679	+	17.3	1000	Intergenic	L1PB1|LINE|L1	34199	NM_144773	128674	Hs.375029	NM_144773	ENSG00000101292	PROKR2	GPR73L1|GPR73b|GPRg2|HH3|KAL3|PKR2|dJ680N4.3	prokineticin receptor 2	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr20-4568	chr20	5302142	5304729	+	48.6	2587	Intergenic	Intergenic	-6057	NM_144773	128674	Hs.375029	NM_144773	ENSG00000101292	PROKR2	GPR73L1|GPR73b|GPRg2|HH3|KAL3|PKR2|dJ680N4.3	prokineticin receptor 2	protein-coding	48.65	7.77	6.261261261	2.96E-18
chr20-4584	chr20	6912289	6913554	+	25.6	1265	Intergenic	AluJb|SINE|Alu	164176	NM_001200	650	Hs.73853	NM_001200	ENSG00000125845	BMP2	BDA2|BMP2A	bone morphogenetic protein 2	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr20-4585	chr20	7332172	7334107	+	30.7	1935	"intron (NR_110610, intron 1 of 2)"	"intron (NR_110610, intron 1 of 2)"	5059	NR_110610	101929312	Hs.559354	NR_110610		LINC01706	-	long intergenic non-protein coding RNA 1706	ncRNA	30.72	4.85	6.334020619	3.34E-12
chr20-4594	chr20	9496423	9497423	+	17.3	1000	"exon (NM_012261, exon 4 of 6)"	"exon (NM_012261, exon 4 of 6)"	-1278	NR_109957	101929329	Hs.589878	NR_109957	ENSG00000225988	LAMP5-AS1	-	LAMP5 antisense RNA 1	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr20-4601	chr20	10327131	10328131	+	17.9	1000	Intergenic	Intergenic	84942	NM_018848	8195	Hs.472119	NM_018848	ENSG00000125863	MKKS	BBS6|HMCS|KMS|MKS	McKusick-Kaufman syndrome	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-4606	chr20	11766657	11767964	+	20.5	1307	Intergenic	LTR31|LTR|ERV1	84053	NR_110635	728450	Hs.560990	NR_110635	ENSG00000228422	LINC00687	C20orf61|dJ1012F16.1	long intergenic non-protein coding RNA 687	ncRNA	20.48	2.43	8.427983539	2.25E-10
chr20-4607	chr20	12731147	12732147	+	16.6	1000	Intergenic	Intergenic	185964	NR_109872	102606466	Hs.602196	NR_109872		LOC102606466	-	uncharacterized LOC102606466	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr20-4613	chr20	13110512	13112003	+	26.9	1491	"intron (NM_018327, intron 9 of 11)"	"intron (NM_018327, intron 9 of 11)"	-91161	NM_080826	140862	Hs.559353	NM_080826	ENSG00000101230	ISM1	C20orf82|ISM|Isthmin|bA149I18.1|dJ1077I2.1	isthmin 1	protein-coding	26.88	6.31	4.259904913	6.42E-08
chr20-4616	chr20	13247277	13248713	+	25.6	1436	"intron (NM_080826, intron 1 of 5)"	"intron (NM_080826, intron 1 of 5)"	-27661	NR_040043	100505536	Hs.665253	NR_040043		ISM1-AS1	-	ISM1 antisense RNA 1	ncRNA	25.6	4.85	5.278350515	4.26E-09
chr20-4617	chr20	13821304	13824482	+	44.8	3178	Intergenic	MER34B|LTR|ERV1	57221	NR_029377	79133	Hs.472165	NM_024120	ENSG00000101247	NDUFAF5	C20orf7|bA526K24.2|dJ842G6.1	NADH:ubiquinone oxidoreductase complex assembly factor 5	protein-coding	44.81	9.22	4.860086768	9.30E-14
chr20-4630	chr20	15591378	15592645	+	17.9	1267	"intron (NM_080676, intron 8 of 16)"	MIRb|SINE|MIR	311948	NR_130925	613266	Hs.309149	NR_130924		LOC613266	-	uncharacterized LOC613266	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr20-4633	chr20	16509818	16510818	+	17.9	1000	"intron (NM_001199865, intron 1 of 24)"	AluSp|SINE|Alu	43761	NM_024704	55614	Hs.101774	NM_024704	ENSG00000089177	KIF16B	C20orf23|KISC20ORF|SNX23	kinesin family member 16B	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-4637	chr20	17208638	17210384	+	26.9	1746	"intron (NM_001201529, intron 1 of 10)"	CpG	1914	NM_002594	5126	Hs.315186	NM_002594	ENSG00000125851	PCSK2	NEC 2|NEC-2|NEC2|PC2|SPC2	proprotein convertase subtilisin/kexin type 2	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr20-4638	chr20	17307372	17308372	+	16.6	1000	"intron (NM_002594, intron 2 of 11)"	"intron (NM_002594, intron 2 of 11)"	100275	NM_002594	5126	Hs.315186	NM_002594	ENSG00000125851	PCSK2	NEC 2|NEC-2|NEC2|PC2|SPC2	proprotein convertase subtilisin/kexin type 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-4639	chr20	17415754	17416754	+	17.9	1000	"intron (NM_002594, intron 7 of 11)"	"intron (NM_002594, intron 7 of 11)"	95760	NM_001195	631	Hs.129702	NM_001195	ENSG00000125864	BFSP1	CP115|CP94|CTRCT33|LIFL-H	beaded filament structural protein 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-4643	chr20	17664325	17665325	+	17.9	1000	Intergenic	LTR16C|LTR|ERVL	-1897	NM_001042576	6238	Hs.472213	NM_004587	ENSG00000125844	RRBP1	ES/130|ES130|RRp|hES	ribosome binding protein 1	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-4655	chr20	18073628	18075764	+	36.5	2136	Intergenic	Intergenic	-34864	NM_001303461	58495	Hs.661013	NM_021220	ENSG00000125850	OVOL2	EUROIMAGE566589|PPCD1|ZNF339	ovo like zinc finger 2	protein-coding	36.48	5.82	6.268041237	1.09E-13
chr20-4668	chr20	19961968	19963374	+	22.4	1406	"intron (NM_001242581, intron 8 of 11)"	"intron (NM_001242581, intron 8 of 11)"	-35263	NM_181528	51126	Hs.368783	NM_016100	ENSG00000173418	NAA20	NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1	"N(alpha)-acetyltransferase 20, NatB catalytic subunit"	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr20-4672	chr20	20202293	20204406	+	39	2113	"intron (NM_015585, intron 17 of 26)"	"intron (NM_015585, intron 17 of 26)"	-145416	NM_002196	3642	Hs.89584	NM_002196	ENSG00000173404	INSM1	IA-1|IA1	INSM transcriptional repressor 1	protein-coding	39.04	6.31	6.187004754	1.96E-14
chr20-4682	chr20	20825293	20827472	+	33.9	2179	Intergenic	Intergenic	-133116	NM_020343	57186	Hs.472285	NM_020343	ENSG00000188559	RALGAPA2	AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220	Ral GTPase activating protein catalytic alpha subunit 2	protein-coding	33.92	6.31	5.375594295	2.25E-11
chr20-4686	chr20	21024017	21025287	+	21.1	1270	Intergenic	Intergenic	-81972	NM_001163022	55857	Hs.187635	NM_018474	ENSG00000088970	KIZ	C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69	kizuna centrosomal protein	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr20-4687	chr20	21083632	21087774	+	83.9	4142	Intergenic	Intergenic	-20921	NM_001163022	55857	Hs.187635	NM_018474	ENSG00000088970	KIZ	C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69	kizuna centrosomal protein	protein-coding	83.85	16.5	5.081818182	5.60E-25
chr20-4697	chr20	22140830	22141830	+	17.9	1000	Intergenic	Intergenic	106602	NR_038394	100270679	Hs.385748	NR_038394	ENSG00000234435	LINC01432	-	long intergenic non-protein coding RNA 1432	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr20-4704	chr20	22732738	22733991	+	20.5	1253	Intergenic	Intergenic	-145209	NR_109883	101929685	Hs.563018	NR_109883	ENSG00000237396	LINC01384	-	long intergenic non-protein coding RNA 1384	ncRNA	20.48	1.94	10.55670103	9.02E-12
chr20-4706	chr20	22774857	22775857	+	16.6	1000	Intergenic	L2b|LINE|L2	-187202	NR_109883	101929685	Hs.563018	NR_109883	ENSG00000237396	LINC01384	-	long intergenic non-protein coding RNA 1384	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr20-471	chr20	46300529	46304493	+	83.2	3964	"intron (NM_198596, intron 10 of 20)"	MER102c|DNA|hAT-Charlie	112297	NM_018837	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding	83.21	16.5	5.043030303	5.60E-25
chr20-4716	chr20	23548758	23549758	+	16	1000	"5' UTR (NM_080610, exon 1 of 3)"	"5' UTR (NM_080610, exon 1 of 3)"	128	NM_080610	128821	Hs.121554	NM_080610	ENSG00000101435	CST9L	CTES7B|bA218C14.1	cystatin 9-like	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-4717	chr20	23613214	23618676	+	89	5462	"exon (NM_000099, exon 2 of 3)"	"exon (NM_000099, exon 2 of 3)"	2740	NM_000099	1471	Hs.304682	NM_000099	ENSG00000101439	CST3	ARMD11|HEL-S-2	cystatin C	protein-coding	88.97	16.99	5.23660977	3.75E-27
chr20-4729	chr20	24647017	24648283	+	20.5	1266	TTS (NM_001323606)	TTS (NM_001323606)	197208	NM_001323607	79953	Hs.124638	NM_024893	ENSG00000101463	SYNDIG1	C20orf39|DSPC2|IFITMD5|TMEM90B	synapse differentiation inducing 1	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr20-4735	chr20	24833833	24834833	+	17.3	1000	Intergenic	LTR56|LTR|ERV1	-95533	NM_003650	8530	Hs.143212	NM_003650	ENSG00000077984	CST7	CMAP	cystatin F	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr20-4742	chr20	26118942	26119942	+	17.9	1000	Intergenic	Intergenic	-24765	NR_003678	149934	Hs.711274	NM_001039379	ENSG00000240108	NCOR1P1	C20orf191|bB329D4.2	nuclear receptor corepressor 1 pseudogene 1	pseudo	17.92	2.91	6.158075601	1.38E-07
chr20-4747	chr20	29994035	29995546	+	25	1511	promoter-TSS (NM_001011878)	promoter-TSS (NM_001011878)	-721	NM_001011878	245934	Hs.272294	NM_001011878	ENSG00000204548	DEFB121	DEFB21|ESC42RELC	defensin beta 121	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr20-4750	chr20	30436706	30437969	+	18.6	1263	"intron (NM_001320479, intron 8 of 9)"	CpG	-3917	NM_004118	2307	Hs.516971	NM_004118	ENSG00000179772	FOXS1	FKHL18|FREAC10	forkhead box S1	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr20-4754	chr20	30619412	30622553	+	55	3141	TTS (NM_080625)	TTS (NM_080625)	-19009	NM_001172131	3055	Hs.655210	NM_002110	ENSG00000101336	HCK	JTK9|p59Hck|p61Hck	"HCK proto-oncogene, Src family tyrosine kinase"	protein-coding	55.05	13.59	4.050772627	6.99E-14
chr20-4763	chr20	31220566	31223807	+	48	3241	"intron (NM_182584, intron 4 of 4)"	L2c|LINE|L2	17597	NM_182584	284805	Hs.353262	NM_182584		C20orf203	-	chromosome 20 open reading frame 203	protein-coding	48.01	8.74	5.493135011	6.98E-16
chr20-4768	chr20	31618372	31619372	+	17.3	1000	promoter-TSS (NM_174897)	promoter-TSS (NM_174897)	-582	NM_174897	128859	Hs.375090	NM_174897	ENSG00000167104	BPIFB6	BPIL3|LPLUNC6	BPI fold containing family B member 6	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr20-478	chr20	48374750	48376966	+	51.8	2216	Intergenic	MLT1L|LTR|ERVL-MaLR	-45437	NM_004776	9334	Hs.370487	NM_004776	ENSG00000158470	B4GALT5	B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V	"beta-1,4-galactosyltransferase 5"	protein-coding	51.85	8.25	6.284848485	5.42E-19
chr20-4790	chr20	32897209	32898209	+	17.9	1000	"intron (NM_001161766, intron 1 of 9)"	GA-rich|Low_complexity|Low_complexity	1899	NM_001161766	191	Hs.388004	NM_000687	ENSG00000101444	AHCY	SAHH|adoHcyase	adenosylhomocysteinase	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr20-4792	chr20	33419365	33420365	+	16.6	1000	Intergenic	L1MB3|LINE|L1	2400	NR_002165	128872	Hs.558624	NR_002165		HMGB3P1	HMG4L|HMGB3L1|dJ18C9.3	high mobility group box 3 pseudogene 1	pseudo	16.64	3.88	4.288659794	1.81E-05
chr20-4797	chr20	34651080	34652684	+	26.2	1604	Intergenic	Intergenic	-13000	NR_027451	647979	Hs.743232	NR_027451	ENSG00000260032	NORAD	LINC00657	non-coding RNA activated by DNA damage	ncRNA	26.24	5.82	4.508591065	7.99E-08
chr20-480	chr20	49716486	49718258	+	39	1772	Intergenic	Intergenic	-77697	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	39.04	6.8	5.741176471	1.26E-13
chr20-4803	chr20	34858989	34859989	+	16	1000	Intergenic	Intergenic	-34756	NM_014902	22839	Hs.249600	NM_014902	ENSG00000080845	DLGAP4	DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4	DLG associated protein 4	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-481	chr20	50178656	50180863	+	57.6	2207	promoter-TSS (NM_001136021)	promoter-TSS (NM_001136021)	-389	NM_001258294	4773	Hs.744148	NM_012340	ENSG00000101096	NFATC2	NFAT1|NFATP	nuclear factor of activated T-cells 2	protein-coding	57.61	11.16	5.16218638	3.55E-18
chr20-4826	chr20	36532896	36534268	+	19.8	1372	"intron (NM_080607, intron 1 of 3)"	"intron (NM_080607, intron 1 of 3)"	2083	NM_080607	128434	Hs.517029	NM_080607	ENSG00000132821	VSTM2L	C20orf102|dJ1118M15.2	V-set and transmembrane domain containing 2 like	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr20-4827	chr20	36556555	36557816	+	22.4	1261	"intron (NM_080607, intron 1 of 3)"	L2a|LINE|L2	25686	NM_080607	128434	Hs.517029	NM_080607	ENSG00000132821	VSTM2L	C20orf102|dJ1118M15.2	V-set and transmembrane domain containing 2 like	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr20-4830	chr20	36813062	36814062	+	17.9	1000	Intergenic	L1MB8|LINE|L1	-18582	NM_001323316	7052	Hs.517033	NM_004613	ENSG00000198959	TGM2	TG(C)|TGC	transglutaminase 2	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-4833	chr20	36880909	36881909	+	17.9	1000	"intron (NM_001029864, intron 1 of 13)"	"intron (NM_001029864, intron 1 of 13)"	-7168	NR_104170	149684	Hs.628250	NR_104170	ENSG00000101425	LOC149684	-	uncharacterized LOC149684	ncRNA	17.92	3.4	5.270588235	8.42E-07
chr20-4835	chr20	36929602	36932009	+	35.2	2407	Intergenic	FLAM_C|SINE|Alu	-1747	NM_001725	671	Hs.529019	NM_001725	ENSG00000101425	BPI	BPIFD1|rBPI	bactericidal/permeability-increasing protein	protein-coding	35.2	7.77	4.53024453	3.74E-10
chr20-4838	chr20	37248262	37249262	+	17.3	1000	"intron (NM_001164431, intron 1 of 14)"	MIRb|SINE|MIR	18185	NM_001164431	343578	Hs.451997	NM_001164431	ENSG00000124143	ARHGAP40	C20orf95|dJ1100H13.4	Rho GTPase activating protein 40	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr20-4849	chr20	38178700	38179700	+	17.3	1000	Intergenic	Intergenic	-325809	NR_027124	339568	Hs.434319	NR_027124	ENSG00000230324	LINC01734	-	long intergenic non-protein coding RNA 1734	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr20-4850	chr20	38189511	38190511	+	16.6	1000	Intergenic	Intergenic	-336620	NR_027124	339568	Hs.434319	NR_027124	ENSG00000230324	LINC01734	-	long intergenic non-protein coding RNA 1734	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr20-4851	chr20	38200034	38201034	+	17.9	1000	Intergenic	MER1B|DNA|hAT-Charlie	-347143	NR_027124	339568	Hs.434319	NR_027124	ENSG00000230324	LINC01734	-	long intergenic non-protein coding RNA 1734	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr20-4860	chr20	39073569	39075916	+	41.6	2347	Intergenic	Intergenic	243138	NM_005461	9935	Hs.169487	NM_005461	ENSG00000204103	MAFB	DURS3|KRML|MCTO	MAF bZIP transcription factor B	protein-coding	41.61	6.8	6.119117647	3.54E-15
chr20-4871	chr20	39387082	39388353	+	17.9	1271	Intergenic	Intergenic	-69837	NM_005461	9935	Hs.169487	NM_005461	ENSG00000204103	MAFB	DURS3|KRML|MCTO	MAF bZIP transcription factor B	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-4873	chr20	39594813	39596071	+	22.4	1258	Intergenic	Intergenic	-13959	NM_001318197	100128988	Hs.636443	NM_001318196		LOC100128988	-	uncharacterized LOC100128988	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr20-4877	chr20	40006216	40007216	+	15.4	1000	Intergenic	AluSz6|SINE|Alu	-11218	NM_052846	90187	Hs.726525	NM_052846	ENSG00000183798	EMILIN3	C20orf130|EMILIN5|dJ620E11.4	elastin microfibril interfacer 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-4889	chr20	40980550	40981550	+	17.9	1000	"intron (NM_007050, intron 9 of 30)"	"intron (NM_007050, intron 9 of 30)"	-333073	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	17.92	2.43	7.374485597	1.53E-08
chr20-4891	chr20	41114539	41115539	+	17.3	1000	"intron (NM_007050, intron 7 of 30)"	"intron (NM_007050, intron 7 of 30)"	-199084	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr20-4895	chr20	41380011	41381011	+	17.3	1000	"intron (NM_007050, intron 6 of 30)"	MLT2B3|LTR|ERVL	66388	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr20-4905	chr20	42080193	42081557	+	25.6	1364	Intergenic	MER58A|DNA|hAT-Charlie	-5629	NM_006275	6431	Hs.684950	NM_006275	ENSG00000124193	SRSF6	B52|HEL-S-91|SFRS6|SRP55	serine and arginine rich splicing factor 6	protein-coding	25.6	5.82	4.39862543	7.99E-08
chr20-4907	chr20	42462167	42463167	+	17.9	1000	Intergenic	L3|LINE|CR1	-60691	NR_134577	105372626	Hs.130555	NR_134577	ENSG00000233277	LINC01728	-	long intergenic non-protein coding RNA 1728	ncRNA	17.92	2.43	7.374485597	1.53E-08
chr20-4910	chr20	42506858	42508134	+	21.1	1276	Intergenic	Intergenic	-15862	NR_134577	105372626	Hs.130555	NR_134577	ENSG00000233277	LINC01728	-	long intergenic non-protein coding RNA 1728	ncRNA	21.12	4.37	4.832951945	6.64E-07
chr20-4922	chr20	42683477	42685103	+	23.7	1626	"intron (NM_001098798, intron 5 of 7)"	"intron (NM_001098798, intron 5 of 7)"	109754	NM_001098798	84969	Hs.26608	NM_032883	ENSG00000124191	TOX2	C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1	TOX high mobility group box family member 2	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr20-4923	chr20	42703048	42706532	+	51.2	3484	Intergenic	Intergenic	111428	NM_175913	57158	Hs.441737	NM_020433	ENSG00000149596	JPH2	CMH17|JP-2|JP2	junctophilin 2	protein-coding	51.21	12.62	4.057844691	4.76E-13
chr20-4930	chr20	42770604	42772151	+	23.7	1547	"intron (NM_020433, intron 2 of 5)"	L2a|LINE|L2	44841	NM_175913	57158	Hs.441737	NM_020433	ENSG00000149596	JPH2	CMH17|JP-2|JP2	junctophilin 2	protein-coding	23.68	5.82	4.068728522	1.51E-06
chr20-4935	chr20	42787009	42788009	+	16.6	1000	"intron (NM_020433, intron 2 of 5)"	(TGGG)n|Simple_repeat|Simple_repeat	28709	NM_175913	57158	Hs.441737	NM_020433	ENSG00000149596	JPH2	CMH17|JP-2|JP2	junctophilin 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-4943	chr20	42973650	42975836	+	44.2	2186	"intron (NM_178491, intron 4 of 4)"	AluSx1|SINE|Alu	8945	NM_178491	140902	Hs.580807	NM_178491	ENSG00000101074	R3HDML	dJ881L22.3	R3H domain containing like	protein-coding	44.17	9.71	4.548918641	1.81E-12
chr20-4951	chr20	43081488	43082744	+	19.8	1256	"intron (NR_132343, intron 2 of 2)"	"intron (NR_132343, intron 2 of 2)"	-2919	NR_109893	101927242	Hs.143307	NR_109893	ENSG00000168746	LINC01430	-	long intergenic non-protein coding RNA 1430	ncRNA	19.84	4.85	4.090721649	1.08E-05
chr20-4959	chr20	43457931	43460036	+	33.3	2105	Intergenic	Tigger2b_Pri|DNA|TcMar-Tigger	-20004	NM_001205317	140730	Hs.517065	NM_182970	ENSG00000101098	RIMS4	C20orf190|RIM 4|RIM-4|RIM4|RIM4-gamma|RIM4gamma	regulating synaptic membrane exocytosis 4	protein-coding	33.28	7.28	4.571428571	4.51E-10
chr20-498	chr20	57212404	57216128	+	71	3724	Intergenic	Intergenic	4438	NR_125359	79160	Hs.280135	NR_125359	ENSG00000268941	LINC01711	-	long intergenic non-protein coding RNA 1711	ncRNA	71.05	16.02	4.435081149	8.41E-19
chr20-4984	chr20	44747946	44748946	+	17.9	1000	"intron (NM_152854, intron 1 of 7)"	MIRb|SINE|MIR	1553	NM_001322422	958	Hs.472860	NM_001250	ENSG00000101017	CD40	Bp50|CDW40|TNFRSF5|p50	CD40 molecule	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-4992	chr20	44873949	44875877	+	34.6	1928	"intron (NM_021248, intron 2 of 11)"	"intron (NM_021248, intron 2 of 11)"	62224	NM_021248	64405	Hs.472861	NM_021248	ENSG00000149654	CDH22	C20orf25|dJ998H6.1	cadherin 22	protein-coding	34.56	4.85	7.125773196	1.02E-14
chr20-4996	chr20	44932343	44935137	+	55.7	2794	"intron (NM_021248, intron 1 of 11)"	"intron (NM_021248, intron 1 of 11)"	3397	NM_021248	64405	Hs.472861	NM_021248	ENSG00000149654	CDH22	C20orf25|dJ998H6.1	cadherin 22	protein-coding	55.69	10.68	5.214419476	2.00E-17
chr20-4997	chr20	44936664	44937664	+	16	1000	promoter-TSS (NM_021248)	promoter-TSS (NM_021248)	-27	NM_021248	64405	Hs.472861	NM_021248	ENSG00000149654	CDH22	C20orf25|dJ998H6.1	cadherin 22	protein-coding	16	0	16.4818808	1.26E-14
chr20-500	chr20	57407475	57408475	+	25.6	1000	"intron (NR_002785, intron 4 of 4)"	"intron (NR_002785, intron 4 of 4)"	-6798	NM_016592	2778	Hs.125898	NM_000516	ENSG00000087460	GNAS	AHO|C20orf45|GNAS1|GPSA|GSA|GSP|NESP|POH|SCG6|SgVI	GNAS complex locus	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr20-5006	chr20	45203271	45204271	+	17.3	1000	"intron (NM_001193340, intron 10 of 12)"	AluJb|SINE|Alu	-24558	NM_080721	128506	Hs.526636	NM_080721	ENSG00000149635	OCSTAMP	C20orf123|OC-STAMP|dJ257E24.3	osteoclast stimulatory transmembrane protein	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr20-5009	chr20	45423153	45424153	+	17.3	1000	Intergenic	Intergenic	85374	NM_030777	81031	Hs.305971	NM_030777	ENSG00000197496	SLC2A10	ATS|GLUT10	solute carrier family 2 member 10	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr20-5010	chr20	45432833	45435936	+	53.8	3103	Intergenic	Arthur1|DNA|hAT-Tip100	-88879	NM_005244	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding	53.77	12.62	4.260697306	2.65E-14
chr20-5012	chr20	45584713	45585713	+	17.3	1000	"intron (NM_005244, intron 1 of 15)"	MLT1J2|LTR|ERVL-MaLR	61950	NM_172110	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr20-5014	chr20	45606857	45608146	+	20.5	1289	"intron (NM_005244, intron 1 of 15)"	L2b|LINE|L2	84238	NM_172110	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding	20.48	2.43	8.427983539	2.25E-10
chr20-5023	chr20	45805694	45806694	+	16.6	1000	"intron (NM_172110, intron 12 of 13)"	L2a|LINE|L2	10585	NR_037410	100500814		NR_037410	ENSG00000264901	MIR3616	mir-3616	microRNA 3616	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr20-5024	chr20	46317280	46318280	+	16	1000	"intron (NM_198596, intron 5 of 20)"	MIRb|SINE|MIR	97028	NM_018837	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-5026	chr20	46365607	46366607	+	16.6	1000	"intron (NM_198596, intron 2 of 20)"	MER20B|DNA|hAT-Charlie	48701	NM_018837	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-503	chr20	57658891	57659891	+	25.6	1000	Intergenic	MER113|DNA|hAT-Charlie	-41490	NM_016045	51012	Hs.656865	NM_016045	ENSG00000101166	PRELID3B	C20orf45|SLMO2|dJ543J19.5	PRELI domain containing 3B	protein-coding	25.6	5.34	4.794007491	2.00E-08
chr20-5034	chr20	46564927	46567037	+	39	2110	Intergenic	Intergenic	-45988	NR_109942	101060004	Hs.129970	NR_109942		LINC01523	-	long intergenic non-protein coding RNA 1523	ncRNA	39.04	7.77	5.024453024	3.34E-12
chr20-5040	chr20	46913851	46917056	+	61.4	3205	Intergenic	MER102c|DNA|hAT-Charlie	-73201	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	61.45	12.13	5.065952185	5.84E-19
chr20-5045	chr20	46960575	46961575	+	17.3	1000	Intergenic	LTR16E2|LTR|ERVL	-27579	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	17.28	2.43	7.111111111	1.14E-07
chr20-5052	chr20	47130759	47133167	+	221.5	2408	Intergenic	D20S16|Satellite|Satellite	143309	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	221.47	43.68	5.070283883	8.45E-64
chr20-5057	chr20	47296809	47299711	+	41.6	2902	"intron (NM_020820, intron 10 of 39)"	"intron (NM_020820, intron 10 of 39)"	146160	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	41.61	4.85	8.579381443	3.22E-19
chr20-5067	chr20	47977755	47978755	+	17.9	1000	Intergenic	AluSx1|SINE|Alu	81035	NR_003030	692057		NR_003030	ENSG00000212304	SNORD12	HBII-99|MIR1259|MIRN1259	"small nucleolar RNA, C/D box 12"	snoRNA	17.92	2.91	6.158075601	1.38E-07
chr20-5088	chr20	48839113	48840364	+	18.6	1251	Intergenic	Intergenic	-31132	NR_125739	101927559	Hs.442486	NR_125739	ENSG00000277449	CEBPB-AS1	-	CEBPB antisense RNA 1	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr20-509	chr20	59310641	59311641	+	24.3	1000	Intergenic	Intergenic	171521	NR_039653	100616440		NR_039653	ENSG00000265617	MIR548AG2	-	microRNA 548ag-2	ncRNA	24.32	5.34	4.554307116	9.72E-08
chr20-5096	chr20	49036390	49037390	+	17.9	1000	Intergenic	MIRb|SINE|MIR	-89968	NM_002827	5770	Hs.417549	NM_002827	ENSG00000196396	PTPN1	PTP1B	"protein tyrosine phosphatase, non-receptor type 1"	protein-coding	17.92	1.46	12.2739726	2.41E-11
chr20-5100	chr20	49414748	49418068	+	56.3	3320	"intron (NM_001010974, intron 1 of 3)"	AluJb|SINE|Alu	4977	NM_001010974	55653	Hs.381178	NM_017843	ENSG00000124243	BCAS4	CNOL	breast carcinoma amplified sequence 4	protein-coding	56.33	12.62	4.463549921	1.34E-15
chr20-5102	chr20	49449382	49450651	+	25	1269	"intron (NM_001010974, intron 3 of 3)"	MER20|DNA|hAT-Charlie	38585	NM_001010974	55653	Hs.381178	NM_017843	ENSG00000124243	BCAS4	CNOL	breast carcinoma amplified sequence 4	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr20-5113	chr20	49734501	49736920	+	39.7	2419	Intergenic	Intergenic	-96035	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	39.69	5.82	6.819587629	3.74E-16
chr20-5114	chr20	49739614	49743639	+	66.6	4025	Intergenic	AluSp|SINE|Alu	-101951	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	66.57	16.5	4.034545455	2.24E-16
chr20-5119	chr20	49791892	49792892	+	19.2	1000	Intergenic	MER5B|DNA|hAT-Charlie	-152717	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr20-512	chr20	59824661	59831946	+	155.5	7285	"intron (NM_001794, intron 1 of 15)"	CpG	821	NM_001794	1002	Hs.473231	NM_001794	ENSG00000179242	CDH4	CAD4|R-CAD|RCAD	cadherin 4	protein-coding	155.54	25.24	6.162440571	1.90E-53
chr20-5126	chr20	50184401	50185401	+	16.6	1000	Intergenic	Intergenic	-5531	NM_001258294	4773	Hs.744148	NM_012340	ENSG00000101096	NFATC2	NFAT1|NFATP	nuclear factor of activated T-cells 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-5132	chr20	50323953	50324953	+	17.3	1000	"intron (NM_006045, intron 4 of 27)"	FRAM|SINE|Alu	60497	NM_006045	10079	Hs.649234	NM_006045	ENSG00000054793	ATP9A	ATPIIA	ATPase phospholipid transporting 9A (putative)	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr20-5138	chr20	50482250	50483250	+	17.9	1000	Intergenic	AluSz|SINE|Alu	-3298	NR_110016	101927678	Hs.683840	NR_110016	ENSG00000227964	LINC01429	-	long intergenic non-protein coding RNA 1429	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr20-5139	chr20	50828907	50829907	+	16	1000	Intergenic	LTR37A|LTR|ERV1	-20883	NM_199427	55734	Hs.473082	NM_018197	ENSG00000020256	ZFP64	ZNF338	ZFP64 zinc finger protein	protein-coding	16	3.4	4.705882353	2.25E-05
chr20-5142	chr20	50919073	50920374	+	21.1	1301	Intergenic	Intergenic	-111199	NM_199427	55734	Hs.473082	NM_018197	ENSG00000020256	ZFP64	ZNF338	ZFP64 zinc finger protein	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr20-5158	chr20	51981898	51983180	+	21.8	1282	"intron (NM_001193421, intron 2 of 2)"	"intron (NM_001193421, intron 2 of 2)"	180717	NM_001193421	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr20-5163	chr20	52113530	52115010	+	23	1480	Intergenic	Intergenic	-55039	NR_110051	101927770		NR_110051		LOC101927770	-	uncharacterized LOC101927770	ncRNA	23.04	5.34	4.314606742	4.49E-07
chr20-5166	chr20	52634710	52635710	+	17.9	1000	"intron (NM_001316361, intron 4 of 9)"	"intron (NM_001316361, intron 4 of 9)"	40349	NM_001323347	8537	Hs.400556	NM_003657	ENSG00000064787	BCAS1	AIBC1|NABC1	breast carcinoma amplified sequence 1	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-5169	chr20	52768312	52769312	+	17.3	1000	Intergenic	LTR16A2|LTR|ERVL	21704	NM_000782	1591	Hs.89663	NM_000782	ENSG00000019186	CYP24A1	CP24|CYP24|HCAI|HCINF1|P450-CC24	cytochrome P450 family 24 subfamily A member 1	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr20-5185	chr20	54094189	54095189	+	16.6	1000	Intergenic	L1MC4|LINE|L1	-50954	NR_110064	101927796	Hs.737040	NR_110064	ENSG00000224008	LINC01441	-	long intergenic non-protein coding RNA 1441	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr20-5186	chr20	54460741	54461741	+	17.3	1000	Intergenic	L1M5|LINE|L1	119287	NM_080617	140689	Hs.126141	NM_080617	ENSG00000054803	CBLN4	CBLNL1	cerebellin 4 precursor	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr20-5188	chr20	54788146	54789146	+	17.9	1000	Intergenic	MamGypLTR1d|LTR|Gypsy	-35142	NM_019888	4159	Hs.248018	NM_019888	ENSG00000124089	MC3R	BMIQ9|MC3|MC3-R|OB20|OQTL	melanocortin 3 receptor	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr20-5190	chr20	54917769	54919310	+	22.4	1541	Intergenic	Intergenic	-15444	NM_080821	116151	Hs.143736	NM_080821	ENSG00000124098	FAM210B	5A3|C20orf108|dJ1167H4.1	family with sequence similarity 210 member B	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr20-5196	chr20	55206464	55212029	+	86.4	5565	"exon (NM_003222, exon 5 of 7)"	"exon (NM_003222, exon 5 of 7)"	4888	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	86.41	20.39	4.237861697	1.50E-21
chr20-5199	chr20	55295665	55297313	+	26.2	1648	Intergenic	L2c|LINE|L2	92131	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	26.24	4.85	5.410309278	4.26E-09
chr20-5200	chr20	55356026	55357292	+	17.9	1266	Intergenic	MER33|DNA|hAT-Charlie	152301	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr20-5201	chr20	55367732	55369008	+	19.2	1276	Intergenic	Intergenic	164012	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr20-5202	chr20	55416839	55417839	+	17.9	1000	Intergenic	MER52A|LTR|ERV1	212981	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-5205	chr20	55548057	55549057	+	17.3	1000	Intergenic	Intergenic	-240195	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr20-5206	chr20	55618521	55619894	+	21.1	1373	Intergenic	L2a|LINE|L2	-169545	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	21.12	1.94	10.88659794	9.02E-12
chr20-5209	chr20	55654786	55655786	+	16.6	1000	Intergenic	Intergenic	-133466	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr20-5210	chr20	55666243	55667243	+	17.3	1000	Intergenic	L2b|LINE|L2	-122009	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr20-5213	chr20	55679311	55681174	+	37.8	1863	Intergenic	Intergenic	-108510	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	37.76	6.31	5.984152139	1.20E-13
chr20-5216	chr20	55703329	55704329	+	17.9	1000	Intergenic	MLT1E2|LTR|ERVL-MaLR	-84923	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr20-524	chr20	552051	555702	+	65.9	3651	Intergenic	Intergenic	-29394	NM_001895	1457	Hs.644056	NM_001895	ENSG00000101266	CSNK2A1	CK2A1|CKII|CSNK2A3|OCNDS	casein kinase 2 alpha 1	protein-coding	65.93	9.71	6.789907312	2.86E-25
chr20-5242	chr20	56221759	56223439	+	27.5	1680	TTS (NM_001255976)	TTS (NM_001255976)	-26967	NM_001160418	81030	Hs.302123	NM_030776	ENSG00000124256	ZBP1	C20orf183|DAI|DLM-1|DLM1	Z-DNA binding protein 1	protein-coding	27.52	5.82	4.728522337	1.71E-08
chr20-5248	chr20	56298006	56301024	+	51.8	3018	Intergenic	AluY|SINE|Alu	-12923	NM_199171	56937	Hs.517155	NM_020182	ENSG00000124225	PMEPA1	STAG1|TMEPAI	"prostate transmembrane protein, androgen induced 1"	protein-coding	51.85	10.68	4.854868914	2.59E-15
chr20-5258	chr20	56487241	56488970	+	29.4	1729	Intergenic	L2b|LINE|L2	17655	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	29.44	3.88	7.587628866	2.58E-13
chr20-526	chr20	2187244	2194682	+	143.4	7438	"intron (NM_001287682, intron 1 of 1)"	MIRb|SINE|MIR	3389	NM_001287682	388780	Hs.132163	NM_001287682		LOC388780	-	uncharacterized LOC388780	protein-coding	143.38	34.46	4.160766106	1.99E-34
chr20-5264	chr20	56704520	56711722	+	131.2	7202	Intergenic	Intergenic	-17862	NM_178456	128602	Hs.43977	NM_178456	ENSG00000124237	C20orf85	LLC1|bA196N14.1	chromosome 20 open reading frame 85	protein-coding	131.22	31.06	4.224726336	7.32E-32
chr20-5275	chr20	57084110	57086377	+	36.5	2267	"intron (NM_153360, intron 1 of 3)"	L2c|LINE|L2	4751	NM_153360	164284	Hs.119286	NM_153360	ENSG00000198768	APCDD1L	-	APC down-regulated 1 like	protein-coding	36.48	6.8	5.364705882	3.95E-12
chr20-5278	chr20	57126032	57128425	+	42.2	2393	"intron (NR_034147, intron 6 of 6)"	"intron (NR_034147, intron 6 of 6)"	36793	NR_034147	149773	Hs.685214	NR_034147	ENSG00000231290	APCDD1L-AS1	-	APCDD1L antisense RNA 1 (head to head)	ncRNA	42.25	6.31	6.695721078	7.07E-17
chr20-528	chr20	2300981	2302586	+	34.6	1605	"intron (NM_003245, intron 7 of 12)"	"intron (NM_003245, intron 7 of 12)"	25170	NM_003245	7053	Hs.2022	NM_003245	ENSG00000125780	TGM3	TGE	transglutaminase 3	protein-coding	34.56	8.25	4.189090909	1.34E-09
chr20-5287	chr20	57366192	57367835	+	27.5	1643	Intergenic	Intergenic	18532	NR_134566	105372695	Hs.128204	NR_134566		LOC105372695	-	uncharacterized LOC105372695	ncRNA	27.52	6.31	4.36133122	6.42E-08
chr20-5299	chr20	57863386	57865780	+	44.8	2394	Intergenic	MIRb|SINE|MIR	-10899	NM_001302455	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	44.81	9.22	4.860086768	9.30E-14
chr20-5301	chr20	57938794	57941294	+	37.1	2500	Intergenic	Intergenic	64562	NM_207032	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	37.12	8.25	4.499393939	6.71E-11
chr20-5307	chr20	57974440	57976824	+	39.7	2384	Intergenic	Intergenic	100150	NM_207032	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	39.69	8.25	4.810909091	2.95E-12
chr20-5317	chr20	58140818	58143733	+	44.8	2915	Intergenic	Intergenic	-10289	NM_001199505	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	44.81	11.16	4.015232975	1.73E-11
chr20-5320	chr20	58162122	58163122	+	15.4	1000	"intron (NM_001199505, intron 1 of 12)"	MLT1E2|LTR|ERVL-MaLR	10058	NM_001199505	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr20-5333	chr20	58408723	58409723	+	17.3	1000	"intron (NM_001199505, intron 8 of 12)"	"intron (NM_001199505, intron 8 of 12)"	99495	NM_014258	10388	Hs.202676	NM_014258	ENSG00000196074	SYCP2	SCP-2|SCP2	synaptonemal complex protein 2	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr20-5340	chr20	59176316	59177316	+	17.3	1000	Intergenic	Intergenic	37196	NR_039653	100616440		NR_039653	ENSG00000265617	MIR548AG2	-	microRNA 548ag-2	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr20-5343	chr20	59210711	59212304	+	23.7	1593	Intergenic	Intergenic	71887	NR_039653	100616440		NR_039653	ENSG00000265617	MIR548AG2	-	microRNA 548ag-2	ncRNA	23.68	3.4	6.964705882	5.45E-10
chr20-5344	chr20	59216946	59217946	+	17.3	1000	Intergenic	Intergenic	77826	NR_039653	100616440		NR_039653	ENSG00000265617	MIR548AG2	-	microRNA 548ag-2	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr20-5351	chr20	59324585	59325585	+	17.9	1000	Intergenic	Intergenic	185465	NR_039653	100616440		NR_039653	ENSG00000265617	MIR548AG2	-	microRNA 548ag-2	ncRNA	17.92	3.4	5.270588235	8.42E-07
chr20-5354	chr20	59397971	59399229	+	21.1	1258	Intergenic	Intergenic	-255520	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	21.12	1.94	10.88659794	9.02E-12
chr20-5363	chr20	59690783	59691783	+	17.9	1000	Intergenic	MIRb|SINE|MIR	37163	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr20-537	chr20	5306770	5308331	+	37.1	1561	Intergenic	Intergenic	-10172	NM_144773	128674	Hs.375029	NM_144773	ENSG00000101292	PROKR2	GPR73L1|GPR73b|GPRg2|HH3|KAL3|PKR2|dJ680N4.3	prokineticin receptor 2	protein-coding	37.12	8.74	4.247139588	2.45E-10
chr20-5372	chr20	59915817	59918877	+	51.2	3060	"intron (NM_001794, intron 2 of 15)"	MER1A|DNA|hAT-Charlie	89865	NM_001794	1002	Hs.473231	NM_001794	ENSG00000179242	CDH4	CAD4|R-CAD|RCAD	cadherin 4	protein-coding	51.21	11.16	4.588709677	1.06E-14
chr20-5377	chr20	60938001	60948097	+	197.1	10096	promoter-TSS (NM_005560)	promoter-TSS (NM_005560)	-681	NM_005560	3911	Hs.473256	NM_005560	ENSG00000130702	LAMA5	-	laminin subunit alpha 5	protein-coding	197.14	32.04	6.152933833	1.16E-67
chr20-5382	chr20	61040358	61049760	+	192.7	9402	"intron (NM_080473, intron 3 of 6)"	"intron (NM_080473, intron 3 of 6)"	5967	NM_080473	140628	Hs.352250	NM_080473	ENSG00000130700	GATA5	GATAS|bB379O24.1	GATA binding protein 5	protein-coding	192.66	32.52	5.924354244	1.06E-63
chr20-5383	chr20	61055633	61060106	+	117.1	4473	Intergenic	Intergenic	-6843	NM_080473	140628	Hs.352250	NM_080473	ENSG00000130700	GATA5	GATAS|bB379O24.1	GATA binding protein 5	protein-coding	117.13	20.39	5.74448259	2.65E-38
chr20-5398	chr20	61792011	61793011	+	16.6	1000	Intergenic	Intergenic	-17341	NR_029670	406909		NR_029670	ENSG00000207598	MIR124-3	MIRN124-3|MIRN124A3|mir-124-3	microRNA 124-3	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr20-5407	chr20	61940120	61942724	+	44.8	2604	"intron (NM_020882, intron 10 of 35)"	"intron (NM_020882, intron 10 of 35)"	16884	NM_020882	57642	Hs.271285	NM_020882	ENSG00000101203	COL20A1	bA261N11.4	collagen type XX alpha 1 chain	protein-coding	44.81	7.77	5.767052767	6.82E-16
chr20-5410	chr20	62045952	62054520	+	152.3	8568	"intron (NM_172106, intron 11 of 15)"	"intron (NM_172106, intron 11 of 15)"	53794	NM_004518	3785	Hs.161851	NM_004518	ENSG00000075043	KCNQ2	BFNC|EBN|EBN1|ENB1|HNSPC|KCNA11|KV7.2	potassium voltage-gated channel subfamily Q member 2	protein-coding	152.34	29.12	5.231456044	8.80E-46
chr20-5419	chr20	62770242	62771550	+	25	1308	Intergenic	Intergenic	-24931	NM_004535	4661	Hs.279562	NM_004535	ENSG00000196132	MYT1	C20orf36|MTF1|MYTI|NZF2|PLPB1|ZC2H2C1|ZC2HC4A	myelin transcription factor 1	protein-coding	24.96	4.37	5.711670481	4.38E-09
chr20-5421	chr20	62791485	62794156	+	40.3	2671	Intergenic	Intergenic	-3007	NM_004535	4661	Hs.279562	NM_004535	ENSG00000196132	MYT1	C20orf36|MTF1|MYTI|NZF2|PLPB1|ZC2H2C1|ZC2HC4A	myelin transcription factor 1	protein-coding	40.33	6.8	5.930882353	2.14E-14
chr20-543	chr20	13138190	13140043	+	39	1853	"intron (NM_018327, intron 10 of 11)"	"intron (NM_018327, intron 10 of 11)"	-63302	NM_080826	140862	Hs.559353	NM_080826	ENSG00000101230	ISM1	C20orf82|ISM|Isthmin|bA149I18.1|dJ1077I2.1	isthmin 1	protein-coding	39.04	7.77	5.024453024	3.34E-12
chr20-5444	chr20	889259	890259	+	15.4	1000	"intron (NM_015985, intron 1 of 8)"	MIR|SINE|MIR	7218	NM_015985	51378	Hs.278973	NM_015985	ENSG00000101280	ANGPT4	ANG3|ANG4	angiopoietin 4	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-5447	chr20	1048792	1049792	+	16.6	1000	Intergenic	Intergenic	-44580	NM_178578	9491	Hs.471917	NM_006814	ENSG00000125818	PSMF1	PI31	proteasome inhibitor subunit 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr20-5452	chr20	1447819	1448819	+	15.4	1000	promoter-TSS (NM_001206736)	promoter-TSS (NM_001206736)	18	NM_016143	55968	Hs.12865	NM_016143	ENSG00000088833	NSFL1C	P47|UBX1|UBXD10|UBXN2C|dJ776F14.1	NSFL1 cofactor	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr20-5454	chr20	1460262	1461262	+	16.6	1000	"intron (NM_001122962, intron 1 of 4)"	"intron (NM_001122962, intron 1 of 4)"	11471	NM_001134836	284759	Hs.721685	NM_001122962	ENSG00000196209	SIRPB2	PTPN1L|PTPNS1L3|dJ776F14.2	signal regulatory protein beta 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr20-5458	chr20	1501381	1502381	+	16	1000	Intergenic	L2b|LINE|L2	-29648	NM_001122962	284759	Hs.721685	NM_001122962	ENSG00000196209	SIRPB2	PTPN1L|PTPNS1L3|dJ776F14.2	signal regulatory protein beta 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-5477	chr20	1908998	1910533	+	21.8	1535	"intron (NM_001330728, intron 7 of 8)"	"intron (NM_001330728, intron 7 of 8)"	-18091	NR_134520	727993	Hs.551466	NR_134520	ENSG00000233896	LOC727993	-	uncharacterized LOC727993	ncRNA	21.76	4.37	4.979405034	1.32E-07
chr20-5489	chr20	2296852	2298531	+	28.2	1679	"intron (NM_003245, intron 5 of 12)"	"intron (NM_003245, intron 5 of 12)"	21078	NM_003245	7053	Hs.2022	NM_003245	ENSG00000125780	TGM3	TGE	transglutaminase 3	protein-coding	28.16	5.34	5.27340824	7.39E-10
chr20-5506	chr20	2687906	2690195	+	50.6	2289	"intron (NR_138537, intron 6 of 17)"	"intron (NR_138537, intron 6 of 17)"	15526	NR_138537	57593	Hs.471955	NM_020833	ENSG00000088881	EBF4	COE4|O/E-4	early B-cell factor 4	protein-coding	50.57	6.31	8.014263074	4.21E-22
chr20-551	chr20	24713764	24715043	+	29.4	1279	Intergenic	Intergenic	-215463	NM_003650	8530	Hs.143212	NM_003650	ENSG00000077984	CST7	CMAP	cystatin F	protein-coding	29.44	3.88	7.587628866	2.58E-13
chr20-5513	chr20	3151772	3153094	+	21.8	1322	"intron (NM_001282533, intron 1 of 5)"	"intron (NM_001282533, intron 1 of 5)"	1805	NM_001282533	9762	Hs.90232	NM_014731	ENSG00000088899	LZTS3	PROSAPIP1	leucine zipper tumor suppressor family member 3	protein-coding	21.76	5.34	4.074906367	1.97E-06
chr20-5520	chr20	3755658	3759334	+	74.2	3676	TTS (NM_015417)	TTS (NM_015417)	4606	NM_015417	25876	Hs.72620	NM_015417	ENSG00000101222	SPEF1	C20orf28|CLAMP|SPEF1A	sperm flagellar 1	protein-coding	74.25	18.44	4.026572668	4.91E-18
chr20-553	chr20	24829916	24831268	+	33.9	1352	Intergenic	L1PA8|LINE|L1	-99274	NM_003650	8530	Hs.143212	NM_003650	ENSG00000077984	CST7	CMAP	cystatin F	protein-coding	33.92	6.31	5.375594295	2.25E-11
chr20-5530	chr20	4481696	4482696	+	16.6	1000	Intergenic	L1PA6|LINE|L1	-184601	NM_001080121	5621	Hs.472010	NM_000311	ENSG00000171867	PRNP	ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30	prion protein	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr20-5539	chr20	5389529	5390529	+	16.6	1000	Intergenic	MER21B|LTR|ERVL	36365	NR_038240	100507629	Hs.121383	NR_038239	ENSG00000226995	LINC00658	-	long intergenic non-protein coding RNA 658	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr20-5542	chr20	5892061	5893323	+	18.6	1262	"intron (NM_001819, intron 1 of 4)"	"intron (NM_001819, intron 1 of 4)"	718	NM_001819	1114	Hs.516874	NM_001819	ENSG00000089199	CHGB	SCG1	chromogranin B	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr20-5544	chr20	5911787	5912787	+	16	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	18917	NM_001281467	51605	Hs.128791	NM_015939	ENSG00000089195	TRMT6	CGI-09|GCD10|Gcd10p	tRNA methyltransferase 6	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-5546	chr20	6227890	6228890	+	16.6	1000	Intergenic	Tigger2|DNA|TcMar-Tigger	-124199	NM_017671	55612	Hs.472054	NM_017671	ENSG00000101311	FERMT1	C20orf42|DTGCU2|KIND1|UNC112A|URP1	fermitin family member 1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr20-5566	chr20	7376627	7377933	+	23.7	1306	Intergenic	Intergenic	25025	NR_107029	102465865		NR_107029	ENSG00000278159	MIR8062	hsa-mir-8062	microRNA 8062	ncRNA	23.68	4.37	5.418764302	2.46E-08
chr20-5569	chr20	7909835	7910835	+	16	1000	"intron (NM_017545, intron 2 of 7)"	AluSc|SINE|Alu	10758	NM_017545	54363	Hs.193640	NM_017545	ENSG00000101323	HAO1	GOX|GOX1|HAOX1	hydroxyacid oxidase 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr20-5570	chr20	7920487	7921487	+	16	1000	"exon (NM_017545, exon 1 of 8)"	"exon (NM_017545, exon 1 of 8)"	106	NM_017545	54363	Hs.193640	NM_017545	ENSG00000101323	HAO1	GOX|GOX1|HAOX1	hydroxyacid oxidase 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-5572	chr20	9397808	9398808	+	17.3	1000	"intron (NM_000933, intron 21 of 35)"	L1MB7|LINE|L1	-96697	NM_001199897	24141	Hs.22920	NM_012261	ENSG00000125869	LAMP5	BAD-LAMP|BADLAMP|C20orf103|LAMP-5|UNC-46	lysosomal associated membrane protein family member 5	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr20-5582	chr20	10649013	10656629	+	156.8	7616	"intron (NM_000214, intron 2 of 25)"	CpG	1873	NM_000214	182	Hs.224012	NM_000214	ENSG00000101384	JAG1	AGS|AGS1|AHD|AWS|CD339|HJ1|JAGL1	jagged 1	protein-coding	156.82	26.7	5.87340824	9.32E-52
chr20-5588	chr20	11230618	11232117	+	25	1499	Intergenic	Intergenic	22664	NR_038972	339593	Hs.434320	NR_038972		LOC339593	-	uncharacterized LOC339593	ncRNA	24.96	3.88	6.432989691	6.68E-10
chr20-5593	chr20	12397921	12398921	+	16.6	1000	Intergenic	Intergenic	499908	NM_014962	22903	Hs.709366	NM_014962	ENSG00000132640	BTBD3	dJ742J24.1	BTB domain containing 3	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr20-5596	chr20	13050656	13051656	+	17.3	1000	"intron (NM_018327, intron 2 of 11)"	"intron (NM_018327, intron 2 of 11)"	61529	NM_018327	55304	Hs.425023	NM_018327	ENSG00000172296	SPTLC3	C20orf38|LCB2B|LCB3|SPT3|SPTLC2L|dJ718P11|dJ718P11.1|hLCB2b	serine palmitoyltransferase long chain base subunit 3	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr20-5602	chr20	13241315	13242315	+	16.6	1000	"intron (NM_080826, intron 1 of 5)"	AluSq2|SINE|Alu	-21481	NR_040043	100505536	Hs.665253	NR_040043		ISM1-AS1	-	ISM1 antisense RNA 1	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr20-5606	chr20	13883380	13884380	+	16.6	1000	"intron (NR_073207, intron 5 of 18)"	HAL1|LINE|L1	87385	NR_073206	80343	Hs.590879	NM_025229	ENSG00000101251	SEL1L2	C20orf50	SEL1L2 ERAD E3 ligase adaptor subunit	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr20-5613	chr20	15906513	15907513	+	16	1000	"intron (NR_130924, intron 1 of 1)"	L2a|LINE|L2	-3054	NR_130925	613266	Hs.309149	NR_130924		LOC613266	-	uncharacterized LOC613266	ncRNA	16	3.4	4.705882353	2.25E-05
chr20-5615	chr20	16653475	16654475	+	16	1000	Intergenic	Intergenic	-56634	NM_003092	6629	Hs.280378	NM_003092	ENSG00000125870	SNRPB2	Msl1|U2B''	small nuclear ribonucleoprotein polypeptide B2	protein-coding	16	3.4	4.705882353	2.25E-05
chr20-5628	chr20	17540799	17541799	+	16	1000	"intron (NM_001278608, intron 2 of 9)"	"intron (NM_001278608, intron 2 of 9)"	-1694	NM_001161705	631	Hs.129702	NM_001195	ENSG00000125864	BFSP1	CP115|CP94|CTRCT33|LIFL-H	beaded filament structural protein 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr20-5630	chr20	17680590	17683408	+	52.5	2818	"intron (NM_001014977, intron 1 of 2)"	MIRb|SINE|MIR	1406	NM_001014977	140836	Hs.115366	NM_178477	ENSG00000125888	BANF2	BAF-L|BAF2|BAFL|C20orf179	barrier to autointegration factor 2	protein-coding	52.49	6.8	7.719117647	8.94E-23
chr20-5636	chr20	17888922	17890209	+	25	1287	Intergenic	AluSz6|SINE|Alu	54024	NR_003045	692086	Hs.680747	NR_003045	ENSG00000212232	SNORD17	HBI-43	"small nucleolar RNA, C/D box 17"	snoRNA	24.96	5.82	4.288659794	3.56E-07
chr20-564	chr20	36194581	36195841	+	26.2	1260	Intergenic	Intergenic	-38878	NM_006698	10904	Hs.472651	NM_006698	ENSG00000166619	BLCAP	BC10	bladder cancer associated protein	protein-coding	26.24	3.4	7.717647059	9.95E-12
chr20-5642	chr20	18206063	18207347	+	19.8	1284	Intergenic	Intergenic	-62222	NM_001282996	7692	Hs.472221	NM_003434	ENSG00000125846	ZNF133	ZNF150|pHZ-13|pHZ-66	zinc finger protein 133	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr20-5644	chr20	18356949	18357949	+	17.3	1000	Intergenic	Intergenic	-2244	NR_034167	440757	Hs.120399	NM_001004344	ENSG00000237282	LINC00851	DZANK1-AS1	long intergenic non-protein coding RNA 851	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr20-5646	chr20	18986494	18988063	+	19.8	1569	Intergenic	Intergenic	-176431	NM_001302818	100128496	Hs.664484	NM_001242671		C20orf78	dJ1068E13.1	chromosome 20 open reading frame 78	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr20-5649	chr20	19214733	19215733	+	16	1000	"intron (NM_020689, intron 1 of 16)"	"intron (NM_020689, intron 1 of 16)"	21943	NM_020689	57419	Hs.654790	NM_020689	ENSG00000185052	SLC24A3	NCKX3	solute carrier family 24 member 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-5662	chr20	20218486	20220626	+	32.6	2140	"intron (NM_015585, intron 18 of 26)"	"intron (NM_015585, intron 18 of 26)"	-129209	NM_002196	3642	Hs.89584	NM_002196	ENSG00000173404	INSM1	IA-1|IA1	INSM transcriptional repressor 1	protein-coding	32.64	6.31	5.17274168	1.20E-10
chr20-5681	chr20	21386853	21387853	+	16.6	1000	Intergenic	AluSx1|SINE|Alu	-9306	NM_033176	644524	Hs.456662	NM_033176	ENSG00000125816	NKX2-4	NKX2.4|NKX2D	NK2 homeobox 4	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-5706	chr20	22752307	22753307	+	17.9	1000	Intergenic	Intergenic	-164652	NR_109883	101929685	Hs.563018	NR_109883	ENSG00000237396	LINC01384	-	long intergenic non-protein coding RNA 1384	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr20-571	chr20	41066393	41067647	+	25.6	1254	"intron (NM_007050, intron 9 of 30)"	"intron (NM_007050, intron 9 of 30)"	-247103	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	25.6	3.88	6.597938144	1.00E-10
chr20-5711	chr20	23080602	23086124	+	76.8	5522	Intergenic	Intergenic	-16386	NM_012072	22918	Hs.97199	NM_012072	ENSG00000125810	CD93	C1QR1|C1qR(P)|C1qRP|CDw93|ECSM3|MXRA4|dJ737E23.1	CD93 molecule	protein-coding	76.81	18.93	4.05758056	9.35E-19
chr20-5713	chr20	23113452	23114452	+	17.3	1000	promoter-TSS (NR_034149)	promoter-TSS (NR_034149)	-679	NR_034149	200261	Hs.352228	NM_182535	ENSG00000233746	LINC00656	-	long intergenic non-protein coding RNA 656	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr20-5714	chr20	23182991	23183991	+	18.6	1000	Intergenic	L2a|LINE|L2	-70218	NR_034149	200261	Hs.352228	NM_182535	ENSG00000233746	LINC00656	-	long intergenic non-protein coding RNA 656	ncRNA	18.56	3.4	5.458823529	8.42E-07
chr20-5715	chr20	23322610	23323610	+	16	1000	Intergenic	Intergenic	-8263	NM_013248	29107	Hs.516933	NM_013248	ENSG00000132661	NXT1	MTR2|P15	nuclear transport factor 2 like export factor 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr20-5719	chr20	24383035	24384035	+	15.4	1000	Intergenic	Intergenic	-66300	NM_024893	79953	Hs.124638	NM_024893	ENSG00000101463	SYNDIG1	C20orf39|DSPC2|IFITMD5|TMEM90B	synapse differentiation inducing 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-573	chr20	42806888	42808400	+	30.1	1512	"intron (NM_175913, intron 1 of 1)"	"intron (NM_175913, intron 1 of 1)"	8574	NM_175913	57158	Hs.441737	NM_020433	ENSG00000149596	JPH2	CMH17|JP-2|JP2	junctophilin 2	protein-coding	30.08	3.88	7.75257732	2.58E-13
chr20-5737	chr20	24841797	24845082	+	72.3	3285	Intergenic	Intergenic	-86427	NM_003650	8530	Hs.143212	NM_003650	ENSG00000077984	CST7	CMAP	cystatin F	protein-coding	72.33	12.13	5.962901896	6.44E-25
chr20-5743	chr20	25041114	25042114	+	16	1000	Intergenic	L2a|LINE|L2	-2796	NM_001252677	84532	Hs.529353	NM_032501	ENSG00000154930	ACSS1	ACAS2L|ACECS1|AceCS2L	acyl-CoA synthetase short-chain family member 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-5754	chr20	30070331	30071331	+	16	1000	"intron (NM_014012, intron 4 of 4)"	AluSz|SINE|Alu	-2750	NR_024358	140875	Hs.283478	NR_024358	ENSG00000233354	LINC00028	C20orf93|NCRNA00028|dJ1093G12.6	long intergenic non-protein coding RNA 28	ncRNA	16	2.91	5.498281787	4.98E-06
chr20-5766	chr20	30681461	30682731	+	19.2	1270	"intron (NM_002110, intron 11 of 12)"	L1ME3|LINE|L1	-15213	NM_014742	9777	Hs.654665	NM_014742	ENSG00000101337	TM9SF4	dJ836N17.2	transmembrane 9 superfamily member 4	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr20-5770	chr20	31621023	31622023	+	17.3	1000	"intron (NM_174897, intron 2 of 14)"	MER20|DNA|hAT-Charlie	2069	NM_174897	128859	Hs.375090	NM_174897	ENSG00000167104	BPIFB6	BPIL3|LPLUNC6	BPI fold containing family B member 6	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr20-5771	chr20	31644201	31645201	+	16	1000	"intron (NM_182658, intron 2 of 14)"	MIRc|SINE|MIR	1564	NM_182658	359710	Hs.472442	NM_182658	ENSG00000186190	BPIFB3	C20orf185|LPLUNC3|RYA3	BPI fold containing family B member 3	protein-coding	16	2.43	6.58436214	7.90E-07
chr20-5776	chr20	31775925	31778096	+	37.1	2171	Intergenic	AluSc|SINE|Alu	-4401	NR_026760	317716	Hs.434194	NM_173859	ENSG00000183566	BPIFA4P	BASE	"BPI fold containing family A member 4, pseudogene"	pseudo	37.12	7.77	4.777348777	1.66E-11
chr20-5778	chr20	31801121	31805895	+	83.2	4774	Intergenic	Intergenic	-1608	NM_001042439	128861	Hs.360989	NM_178466	ENSG00000131059	BPIFA3	C20orf71|SPLUNC3	BPI fold containing family A member 3	protein-coding	83.21	19.42	4.284757981	2.33E-21
chr20-5784	chr20	31908057	31909057	+	16.6	1000	Intergenic	AluSx1|SINE|Alu	37616	NM_033197	92747	Hs.65551	NM_033197	ENSG00000125999	BPIFB1	C20orf114|LPLUNC1	BPI fold containing family B member 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-5785	chr20	31914949	31921325	+	126.1	6376	Intergenic	MIR|SINE|MIR	47196	NM_033197	92747	Hs.65551	NM_033197	ENSG00000125999	BPIFB1	C20orf114|LPLUNC1	BPI fold containing family B member 1	protein-coding	126.1	21.84	5.773809524	2.73E-41
chr20-5797	chr20	34612865	34614414	+	26.9	1549	"intron (NM_080834, intron 11 of 11)"	L1ME4a|LINE|L1	25243	NR_027451	647979	Hs.743232	NR_027451	ENSG00000260032	NORAD	LINC00657	non-coding RNA activated by DNA damage	ncRNA	26.88	3.88	6.927835052	1.44E-11
chr20-5807	chr20	34775529	34776529	+	17.3	1000	"intron (NM_012156, intron 8 of 21)"	(TGAA)n|Simple_repeat|Simple_repeat	33367	NM_012156	2036	Hs.437422	NM_012156	ENSG00000088367	EPB41L1	4.1N|MRD11	erythrocyte membrane protein band 4.1 like 1	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr20-5810	chr20	34884543	34886225	+	30.7	1682	Intergenic	Intergenic	-8861	NM_014902	22839	Hs.249600	NM_014902	ENSG00000080845	DLGAP4	DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4	DLG associated protein 4	protein-coding	30.72	6.31	4.868462758	6.13E-10
chr20-5822	chr20	35577475	35581532	+	85.1	4057	"intron (NM_015474, intron 1 of 15)"	CpG	743	NM_015474	25939	Hs.580681	NM_015474	ENSG00000101347	SAMHD1	CHBL2|DCIP|HDDC1|MOP-5|SBBI88	SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1	protein-coding	85.13	16.02	5.313982522	2.21E-26
chr20-5834	chr20	36846793	36848332	+	26.9	1539	"intron (NM_001029864, intron 11 of 13)"	MIR|SINE|MIR	-41015	NR_104170	149684	Hs.628250	NR_104170	ENSG00000101425	LOC149684	-	uncharacterized LOC149684	ncRNA	26.88	2.91	9.237113402	7.03E-14
chr20-5852	chr20	38473798	38476325	+	46.1	2527	Intergenic	Intergenic	-158042	NR_109936	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	46.09	6.8	6.777941176	1.95E-18
chr20-5853	chr20	38481723	38482723	+	17.3	1000	Intergenic	MER5B|DNA|hAT-Charlie	-150880	NR_109936	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr20-5856	chr20	38636228	38637873	+	28.2	1645	"non-coding (NR_109937, exon 3 of 3)"	"non-coding (NR_109937, exon 3 of 3)"	3947	NR_109937	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	28.16	4.85	5.806185567	1.30E-10
chr20-5862	chr20	38851309	38852309	+	16.6	1000	Intergenic	L2a|LINE|L2	218706	NR_109937	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr20-5864	chr20	38891220	38893122	+	30.1	1902	Intergenic	Intergenic	259068	NR_109937	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	30.08	4.85	6.202061856	2.13E-11
chr20-5874	chr20	39344818	39347100	+	38.4	2282	Intergenic	Intergenic	-28079	NM_005461	9935	Hs.169487	NM_005461	ENSG00000204103	MAFB	DURS3|KRML|MCTO	MAF bZIP transcription factor B	protein-coding	38.4	4.37	8.787185355	1.37E-18
chr20-5876	chr20	39391627	39393435	+	28.8	1808	Intergenic	MIRb|SINE|MIR	-74651	NM_005461	9935	Hs.169487	NM_005461	ENSG00000204103	MAFB	DURS3|KRML|MCTO	MAF bZIP transcription factor B	protein-coding	28.8	4.85	5.93814433	1.30E-10
chr20-5882	chr20	39423740	39424740	+	16.6	1000	Intergenic	Intergenic	-106360	NM_005461	9935	Hs.169487	NM_005461	ENSG00000204103	MAFB	DURS3|KRML|MCTO	MAF bZIP transcription factor B	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr20-5887	chr20	39580349	39581349	+	16	1000	Intergenic	Intergenic	-28552	NM_001318197	100128988	Hs.636443	NM_001318196		LOC100128988	-	uncharacterized LOC100128988	protein-coding	16	3.4	4.705882353	2.25E-05
chr20-5888	chr20	40425028	40426028	+	16	1000	Intergenic	ERVL-B4-int|LTR|ERVL	-178395	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-5894	chr20	40824923	40825923	+	16	1000	"intron (NM_007050, intron 16 of 30)"	"intron (NM_007050, intron 16 of 30)"	-488700	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	16	1.94	8.24742268	7.67E-08
chr20-5899	chr20	41558484	41559739	+	19.2	1255	"intron (NM_007050, intron 1 of 30)"	"intron (NM_007050, intron 1 of 30)"	244988	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	19.2	4.37	4.393592677	3.16E-06
chr20-5908	chr20	41949090	41950090	+	16.6	1000	Intergenic	Intergenic	-131033	NM_133170	11122	Hs.526879	NM_007050	ENSG00000196090	PTPRT	RPTPrho	"protein tyrosine phosphatase, receptor type T"	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr20-5931	chr20	42889216	42890216	+	16.6	1000	"intron (NM_001256740, intron 3 of 3)"	"intron (NM_001256740, intron 3 of 3)"	13818	NR_046353	78997	Hs.517059	NM_024034	ENSG00000124194	GDAP1L1	dJ881L22.1|dJ995J12.1.1	ganglioside induced differentiation associated protein 1 like 1	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr20-5932	chr20	42914353	42915353	+	16	1000	Intergenic	L1M1|LINE|L1	25039	NM_001080472	128486	Hs.632269	NM_001080472	ENSG00000197296	FITM2	C20orf142|Fit2|dJ881L22.2	fat storage inducing transmembrane protein 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-5935	chr20	42947161	42948161	+	16	1000	Intergenic	AluSx1|SINE|Alu	-7769	NM_001080472	128486	Hs.632269	NM_001080472	ENSG00000197296	FITM2	C20orf142|Fit2|dJ881L22.2	fat storage inducing transmembrane protein 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr20-5936	chr20	42991204	42992499	+	23	1295	"intron (NM_001030003, intron 1 of 9)"	MIR|SINE|MIR	7410	NM_001030003	3172	Hs.116462	NM_000457	ENSG00000101076	HNF4A	FRTS4|HNF4|HNF4a7|HNF4a8|HNF4a9|HNF4alpha|MODY|MODY1|NR2A1|NR2A21|TCF|TCF14	hepatocyte nuclear factor 4 alpha	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr20-5946	chr20	43187250	43188250	+	17.3	1000	"intron (NM_007066, intron 1 of 3)"	AT_rich|Low_complexity|Low_complexity	-23440	NM_001281445	11142	Hs.472831	NM_007066	ENSG00000168734	PKIG	PKI-gamma	cAMP-dependent protein kinase inhibitor gamma	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr20-5954	chr20	43445277	43446743	+	25	1466	Intergenic	Intergenic	-7031	NM_001205317	140730	Hs.517065	NM_182970	ENSG00000101098	RIMS4	C20orf190|RIM 4|RIM-4|RIM4|RIM4-gamma|RIM4gamma	regulating synaptic membrane exocytosis 4	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr20-5966	chr20	44089299	44090552	+	21.1	1253	Intergenic	Intergenic	-8469	NM_006103	10406	Hs.2719	NM_006103	ENSG00000101443	WFDC2	EDDM4|HE4|WAP5|dJ461P17.6	WAP four-disulfide core domain 2	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr20-5973	chr20	44227619	44228619	+	16.6	1000	Intergenic	Intergenic	-20154	NM_130896	90199	Hs.116128	NM_130896	ENSG00000158901	WFDC8	C20orf170|HEL-S-292|WAP8|dJ461P17.1	WAP four-disulfide core domain 8	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr20-5978	chr20	44396626	44398053	+	23	1427	Intergenic	L1MB5|LINE|L1	23208	NM_080614	140686	Hs.419126	NM_080614	ENSG00000124116	WFDC3	WAP14|dJ447F3.3	WAP four-disulfide core domain 3	protein-coding	23.04	4.37	5.272311213	2.46E-08
chr20-5988	chr20	44801582	44802582	+	17.3	1000	TTS (NM_021248)	TTS (NM_021248)	55189	NM_001322422	958	Hs.472860	NM_001250	ENSG00000101017	CD40	Bp50|CDW40|TNFRSF5|p50	CD40 molecule	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr20-5991	chr20	44915959	44918893	+	50.6	2934	"intron (NM_021248, intron 1 of 11)"	L2a|LINE|L2	19711	NM_021248	64405	Hs.472861	NM_021248	ENSG00000149654	CDH22	C20orf25|dJ998H6.1	cadherin 22	protein-coding	50.57	11.65	4.340772532	1.79E-13
chr20-6002	chr20	45064558	45065558	+	16.6	1000	Intergenic	MER34|LTR|ERV1	21224	NR_045983	100130934	Hs.712133	NM_173643		ZNF663P	ZNF663	"zinc finger protein 663, pseudogene"	pseudo	16.64	3.88	4.288659794	1.81E-05
chr20-6013	chr20	45429680	45430680	+	16.6	1000	Intergenic	Intergenic	91901	NM_030777	81031	Hs.305971	NM_030777	ENSG00000197496	SLC2A10	ATS|GLUT10	solute carrier family 2 member 10	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr20-6015	chr20	45528606	45529606	+	16.6	1000	"intron (NM_005244, intron 1 of 15)"	"intron (NM_005244, intron 1 of 15)"	5843	NM_172110	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-6027	chr20	46372338	46373338	+	16	1000	"intron (NM_198596, intron 2 of 20)"	"intron (NM_198596, intron 2 of 20)"	41970	NM_018837	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-6031	chr20	46516242	46518931	+	43.5	2689	Intergenic	Intergenic	-94384	NR_109942	101060004	Hs.129970	NR_109942		LINC01523	-	long intergenic non-protein coding RNA 1523	ncRNA	43.53	6.8	6.401470588	8.79E-17
chr20-6034	chr20	46759716	46761165	+	21.8	1449	Intergenic	Intergenic	-141579	NR_110027	101927457	Hs.445823	NR_110027		LINC01522	-	long intergenic non-protein coding RNA 1522	ncRNA	21.76	2.91	7.47766323	3.87E-10
chr20-6046	chr20	47250107	47251581	+	22.4	1474	"intron (NM_020820, intron 33 of 39)"	G-rich|Low_complexity|Low_complexity	193576	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr20-6048	chr20	47285580	47288110	+	36.5	2530	"intron (NM_020820, intron 14 of 39)"	"intron (NM_020820, intron 14 of 39)"	157575	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	36.48	8.74	4.173913043	1.05E-09
chr20-605	chr20	57825086	57826418	+	28.8	1332	"intron (NM_178457, intron 3 of 4)"	HAL1|LINE|L1	-49730	NM_001302455	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	28.8	5.34	5.393258427	7.39E-10
chr20-6050	chr20	47324302	47326842	+	43.5	2540	"intron (NM_020820, intron 5 of 39)"	"intron (NM_020820, intron 5 of 39)"	118848	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	43.53	9.71	4.483007209	1.81E-12
chr20-6056	chr20	47437086	47438086	+	15.4	1000	"intron (NM_020820, intron 1 of 39)"	AluSz|SINE|Alu	6834	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-606	chr20	57883260	57884539	+	25.6	1279	"intron (NM_207034, intron 2 of 4)"	L3|LINE|CR1	8417	NM_207032	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	25.6	5.34	4.794007491	2.00E-08
chr20-6061	chr20	47953641	47954641	+	16	1000	Intergenic	Intergenic	56921	NR_003030	692057		NR_003030	ENSG00000212304	SNORD12	HBII-99|MIR1259|MIRN1259	"small nucleolar RNA, C/D box 12"	snoRNA	16	2.91	5.498281787	4.98E-06
chr20-6064	chr20	48006244	48007546	+	21.1	1302	"intron (NM_004975, intron 1 of 1)"	"intron (NM_004975, intron 1 of 1)"	92286	NM_004975	3745	Hs.84244	NM_004975	ENSG00000158445	KCNB1	DRK1|Kv2.1	potassium voltage-gated channel subfamily B member 1	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr20-6066	chr20	48025125	48030865	+	87.1	5740	"intron (NM_004975, intron 1 of 1)"	"intron (NM_004975, intron 1 of 1)"	71186	NM_004975	3745	Hs.84244	NM_004975	ENSG00000158445	KCNB1	DRK1|Kv2.1	potassium voltage-gated channel subfamily B member 1	protein-coding	87.05	21.36	4.075374532	3.93E-21
chr20-6069	chr20	48051281	48052603	+	22.4	1322	"intron (NM_004975, intron 1 of 1)"	L2a|LINE|L2	47239	NM_004975	3745	Hs.84244	NM_004975	ENSG00000158445	KCNB1	DRK1|Kv2.1	potassium voltage-gated channel subfamily B member 1	protein-coding	22.4	5.34	4.194756554	1.97E-06
chr20-6077	chr20	48219698	48225073	+	83.2	5375	Intergenic	AluSx|SINE|Alu	-37678	NM_000961	5740	Hs.302085	NM_000961	ENSG00000124212	PTGIS	CYP8|CYP8A1|PGIS|PTGI	prostaglandin I2 synthase	protein-coding	83.21	13.59	6.122884474	1.73E-29
chr20-6080	chr20	48626342	48627342	+	16.6	1000	Intergenic	CpG	27329	NM_005985	6615	Hs.48029	NM_005985	ENSG00000124216	SNAI1	SLUGH2|SNA|SNAH|SNAIL|SNAIL1|dJ710H13.1	snail family transcriptional repressor 1	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr20-6089	chr20	48880305	48881305	+	16.6	1000	Intergenic	AluSx1|SINE|Alu	-3218	NM_001278655	100506115	Hs.235484	NM_001278655		LINC01272	-	long intergenic non-protein coding RNA 1272	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr20-6094	chr20	48948614	48949614	+	16.6	1000	Intergenic	LTR16C|LTR|ERVL	-11235	NR_109950	101927586	Hs.637665	NR_109950	ENSG00000233077	LINC01271	-	long intergenic non-protein coding RNA 1271	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr20-6096	chr20	48977496	48978496	+	17.3	1000	Intergenic	Charlie1a|DNA|hAT-Charlie	-40117	NR_109950	101927586	Hs.637665	NR_109950	ENSG00000233077	LINC01271	-	long intergenic non-protein coding RNA 1271	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr20-6101	chr20	49248784	49250364	+	25.6	1580	"intron (NM_001290268, intron 1 of 21)"	AluSx1|SINE|Alu	3881	NM_080829	140876	Hs.372578	NM_080829	ENSG00000042062	FAM65C	C20orf175|C20orf176	family with sequence similarity 65 member C	protein-coding	25.6	4.85	5.278350515	4.26E-09
chr20-6106	chr20	49420283	49421637	+	23.7	1354	"intron (NM_001010974, intron 1 of 3)"	L1MC4a|LINE|L1	9529	NM_001010974	55653	Hs.381178	NM_017843	ENSG00000124243	BCAS4	CNOL	breast carcinoma amplified sequence 4	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr20-6107	chr20	49443297	49444297	+	16.6	1000	"intron (NM_001010974, intron 2 of 3)"	L1MD3|LINE|L1	32366	NM_001010974	55653	Hs.381178	NM_017843	ENSG00000124243	BCAS4	CNOL	breast carcinoma amplified sequence 4	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-6110	chr20	49768688	49769688	+	16.6	1000	Intergenic	L1ME3A|LINE|L1	-129513	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr20-6126	chr20	51079287	51080287	+	17.3	1000	Intergenic	Intergenic	-157590	NR_110038	101927700	Hs.434465	NR_110038	ENSG00000234948	LINC01524	-	long intergenic non-protein coding RNA 1524	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr20-6128	chr20	51102638	51103638	+	15.4	1000	Intergenic	AluSz6|SINE|Alu	-134239	NR_110038	101927700	Hs.434465	NR_110038	ENSG00000234948	LINC01524	-	long intergenic non-protein coding RNA 1524	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr20-6129	chr20	51232220	51233478	+	20.5	1258	Intergenic	Intergenic	-4528	NR_110038	101927700	Hs.434465	NR_110038	ENSG00000234948	LINC01524	-	long intergenic non-protein coding RNA 1524	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr20-6137	chr20	51802974	51803974	+	16.6	1000	"intron (NM_001193421, intron 1 of 2)"	"intron (NM_001193421, intron 1 of 2)"	1652	NM_001193421	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr20-6141	chr20	51943581	51944581	+	17.3	1000	"intron (NM_001193421, intron 2 of 2)"	"intron (NM_001193421, intron 2 of 2)"	142259	NM_001193421	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr20-6164	chr20	52930125	52931125	+	17.3	1000	Intergenic	GA-rich|Low_complexity|Low_complexity	106123	NM_002623	5203	Hs.91161	NM_002623	ENSG00000101132	PFDN4	C1|PFD4	prefoldin subunit 4	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr20-6186	chr20	55513073	55515023	+	33.3	1950	Intergenic	Intergenic	-274704	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	33.28	3.88	8.577319588	4.55E-16
chr20-6191	chr20	55638847	55640109	+	18.6	1262	Intergenic	AluJb|SINE|Alu	-149274	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	18.56	3.4	5.458823529	8.42E-07
chr20-6218	chr20	56178786	56180263	+	30.7	1477	"non-coding (NR_136660, exon 8 of 8)"	"non-coding (NR_136660, exon 8 of 8)"	16108	NM_001160419	81030	Hs.302123	NM_030776	ENSG00000124256	ZBP1	C20orf183|DAI|DLM-1|DLM1	Z-DNA binding protein 1	protein-coding	30.72	5.82	5.278350515	1.29E-10
chr20-6231	chr20	56304445	56305445	+	16	1000	Intergenic	Intergenic	-18353	NM_199171	56937	Hs.517155	NM_020182	ENSG00000124225	PMEPA1	STAG1|TMEPAI	"prostate transmembrane protein, androgen induced 1"	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-6233	chr20	56338535	56339535	+	16.6	1000	Intergenic	L2b|LINE|L2	-52443	NM_199171	56937	Hs.517155	NM_020182	ENSG00000124225	PMEPA1	STAG1|TMEPAI	"prostate transmembrane protein, androgen induced 1"	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-6237	chr20	56408799	56410093	+	19.8	1294	Intergenic	Intergenic	-61004	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr20-6250	chr20	56609977	56610977	+	16	1000	Intergenic	Intergenic	-115506	NM_178456	128602	Hs.43977	NM_178456	ENSG00000124237	C20orf85	LLC1|bA196N14.1	chromosome 20 open reading frame 85	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-6252	chr20	56672399	56673817	+	21.1	1418	Intergenic	Intergenic	-52875	NM_178456	128602	Hs.43977	NM_178456	ENSG00000124237	C20orf85	LLC1|bA196N14.1	chromosome 20 open reading frame 85	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr20-6265	chr20	56764357	56765947	+	25.6	1590	Intergenic	Kanga2_a|DNA|TcMar-Tc2	38557	NM_001304369	140731	Hs.266571	NM_080674	ENSG00000124227	ANKRD60	C20orf86|bA196N14.3	ankyrin repeat domain 60	protein-coding	25.6	2.43	10.53497942	2.44E-14
chr20-6268	chr20	56793933	56794933	+	16	1000	"intron (NM_001304369, intron 3 of 3)"	L2a|LINE|L2	9276	NM_001304369	140731	Hs.266571	NM_080674	ENSG00000124227	ANKRD60	C20orf86|bA196N14.3	ankyrin repeat domain 60	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-6270	chr20	57071456	57074879	+	57	3423	"intron (NM_153360, intron 1 of 3)"	"intron (NM_153360, intron 1 of 3)"	16827	NM_153360	164284	Hs.119286	NM_153360	ENSG00000198768	APCDD1L	-	APC down-regulated 1 like	protein-coding	56.97	10.68	5.334269663	3.77E-18
chr20-6276	chr20	57178187	57185580	+	116.5	7393	"intron (NR_034147, intron 6 of 6)"	"intron (NR_034147, intron 6 of 6)"	-27945	NR_125359	79160	Hs.280135	NR_125359	ENSG00000268941	LINC01711	-	long intergenic non-protein coding RNA 1711	ncRNA	116.49	27.67	4.209974702	1.14E-28
chr20-6293	chr20	57495624	57498333	+	44.8	2709	Intergenic	Intergenic	29759	NR_132272	2778	Hs.125898	NM_000516	ENSG00000087460	GNAS	AHO|C20orf45|GNAS1|GPSA|GSA|GSP|NESP|POH|SCG6|SgVI	GNAS complex locus	protein-coding	44.81	8.25	5.431515152	3.94E-15
chr20-6297	chr20	57533569	57534569	+	16.6	1000	Intergenic	L1MEf|LINE|L1	-22194	NM_198976	51497	Hs.517148	NM_016397	ENSG00000101158	NELFCD	HSPC130|NELF-C|NELF-D|TH1|TH1L	negative elongation factor complex member C/D	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr20-6304	chr20	57903726	57906080	+	42.9	2354	Intergenic	MLT1K|LTR|ERVL-MaLR	29421	NM_207032	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	42.89	4.85	8.843298969	3.69E-20
chr20-6305	chr20	57935317	57936901	+	27.5	1584	Intergenic	L1MC4a|LINE|L1	60627	NM_207032	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	27.52	2.91	9.457044674	7.03E-14
chr20-6335	chr20	58384275	58387514	+	60.2	3239	"intron (NM_001199505, intron 8 of 12)"	"intron (NM_001199505, intron 8 of 12)"	89629	NM_183244	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	60.17	13.59	4.427520235	2.02E-16
chr20-6339	chr20	58483076	58484076	+	16.6	1000	"intron (NM_014258, intron 14 of 44)"	"intron (NM_014258, intron 14 of 44)"	25142	NM_014258	10388	Hs.202676	NM_014258	ENSG00000196074	SYCP2	SCP-2|SCP2	synaptonemal complex protein 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-6357	chr20	59463419	59464419	+	14.7	1000	Intergenic	Intergenic	-190201	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr20-6359	chr20	59522447	59523447	+	16.6	1000	Intergenic	Intergenic	-131173	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr20-6364	chr20	59637942	59638942	+	16.6	1000	Intergenic	L1ME1|LINE|L1	-15678	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr20-6380	chr20	59943582	59948097	+	69.1	4515	"intron (NM_001794, intron 2 of 15)"	"intron (NM_001794, intron 2 of 15)"	118357	NM_001794	1002	Hs.473231	NM_001794	ENSG00000179242	CDH4	CAD4|R-CAD|RCAD	cadherin 4	protein-coding	69.13	13.11	5.273073989	6.75E-22
chr20-6381	chr20	59971624	59972624	+	16.6	1000	"intron (NM_001794, intron 2 of 15)"	AluJb|SINE|Alu	-102353	NM_001252338	1002	Hs.473231	NM_001794	ENSG00000179242	CDH4	CAD4|R-CAD|RCAD	cadherin 4	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr20-6389	chr20	60987022	60989343	+	33.9	2321	"intron (NM_080833, intron 11 of 13)"	"intron (NM_080833, intron 11 of 13)"	-5843	NM_031215	81928	Hs.301040	NM_031215	ENSG00000149679	CABLES2	C20orf150|dJ908M14.2|ik3-2	Cdk5 and Abl enzyme substrate 2	protein-coding	33.92	7.28	4.659340659	4.51E-10
chr20-6401	chr20	61323364	61324670	+	21.1	1306	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-16172	NM_002531	4923	Hs.590869	NM_002531	ENSG00000101188	NTSR1	NTR	neurotensin receptor 1	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr20-6402	chr20	61331275	61335015	+	67.2	3740	Intergenic	Intergenic	-7044	NM_002531	4923	Hs.590869	NM_002531	ENSG00000101188	NTSR1	NTR	neurotensin receptor 1	protein-coding	67.21	12.62	5.325673534	3.79E-21
chr20-6409	chr20	61459631	61461109	+	25.6	1478	"intron (NM_001853, intron 19 of 31)"	"intron (NM_001853, intron 19 of 31)"	11956	NM_001853	1299	Hs.716639	NM_001853	ENSG00000092758	COL9A3	DJ885L7.4.1|EDM3|IDD|MED	collagen type IX alpha 3 chain	protein-coding	25.6	1.94	13.19587629	4.03E-16
chr20-6417	chr20	61949021	61956124	+	122.3	7103	"intron (NM_020882, intron 26 of 35)"	"intron (NM_020882, intron 26 of 35)"	28034	NM_020882	57642	Hs.271285	NM_020882	ENSG00000101203	COL20A1	bA261N11.4	collagen type XX alpha 1 chain	protein-coding	122.26	21.84	5.597985348	5.05E-39
chr20-6420	chr20	61973416	61976475	+	46.7	3059	"non-coding (NR_046317, exon 6 of 6)"	"non-coding (NR_046317, exon 6 of 6)"	-16395	NR_110634	100130587	Hs.640129	NR_110634	ENSG00000203900	LOC100130587	-	uncharacterized LOC100130587	ncRNA	46.73	10.68	4.375468165	1.21E-12
chr20-6448	chr20	193971	194971	+	16	1000	Intergenic	L2b|LINE|L2	-13428	NM_080831	140881	Hs.112087	NM_080831	ENSG00000125903	DEFB129	C20orf87|DEFB-29|DEFB29|bA530N10.3|hBD-29	defensin beta 129	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-645	chr20	1711893	1713198	+	25	1305	Intergenic	HERVH-int|LTR|ERV1	47847	NR_037142	100289473	Hs.641525	NR_037142	ENSG00000232528	LOC100289473	-	cytoskeleton associated protein 2-like pseudogene	pseudo	24.96	1.94	12.86597938	5.33E-15
chr20-6450	chr20	213502	214758	+	27.5	1256	Intergenic	AluJo|SINE|Alu	6231	NM_080831	140881	Hs.112087	NM_080831	ENSG00000125903	DEFB129	C20orf87|DEFB-29|DEFB29|bA530N10.3|hBD-29	defensin beta 129	protein-coding	27.52	5.82	4.728522337	1.71E-08
chr20-6457	chr20	612420	613420	+	16.6	1000	Intergenic	AluSq2|SINE|Alu	21094	NM_080725	140809	Hs.516830	NM_080725	ENSG00000271303	SRXN1	C20orf139|Npn3|SRX|SRX1	sulfiredoxin 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr20-6460	chr20	664289	665289	+	16.6	1000	Intergenic	AluJr|SINE|Alu	-7966	NM_033129	85508	Hs.355284	NM_033129	ENSG00000215397	SCRT2	ZNF898B	scratch family transcriptional repressor 2	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr20-6483	chr20	1176001	1177001	+	16	1000	Intergenic	LTR16C|LTR|ERVL	-7597	NM_001009612	400831	Hs.148503	NM_001009612	ENSG00000215595	C20orf202	-	chromosome 20 open reading frame 202	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-6487	chr20	1222347	1223347	+	16	1000	"intron (NM_001136566, intron 8 of 13)"	"intron (NM_001136566, intron 8 of 13)"	16083	NM_001136566	642636	Hs.713451	NM_001136566	ENSG00000244588	RAD21L1	RAD21L|dJ545L17.2	RAD21 cohesin complex component like 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr20-6495	chr20	1469961	1471487	+	24.3	1526	"intron (NM_001122962, intron 1 of 4)"	"intron (NM_001122962, intron 1 of 4)"	1509	NM_001134836	284759	Hs.721685	NM_001122962	ENSG00000196209	SIRPB2	PTPN1L|PTPNS1L3|dJ776F14.2	signal regulatory protein beta 2	protein-coding	24.32	5.82	4.178694158	3.56E-07
chr20-6500	chr20	1539225	1541659	+	33.9	2434	Intergenic	LTR45C|LTR|ERV1	-2099	NM_178460	128646	Hs.729560	NM_178460	ENSG00000125900	SIRPD	PTPNS1L2|dJ576H24.4	signal regulatory protein delta	protein-coding	33.92	7.77	4.365508366	1.68E-09
chr20-6505	chr20	1686164	1687164	+	16	1000	Intergenic	AluSz6|SINE|Alu	-48239	NM_001039508	55423	Hs.590883	NM_018556	ENSG00000089012	SIRPG	CD172g|SIRP-B2|SIRPB2|SIRPgamma|bA77C3.1	signal regulatory protein gamma	protein-coding	16	1.94	8.24742268	7.67E-08
chr20-6510	chr20	1721665	1722665	+	16.6	1000	Intergenic	T-rich|Low_complexity|Low_complexity	38227	NR_037142	100289473	Hs.641525	NR_037142	ENSG00000232528	LOC100289473	-	cytoskeleton associated protein 2-like pseudogene	pseudo	16.64	1.94	8.577319588	8.87E-09
chr20-6520	chr20	1946136	1947136	+	16	1000	"non-coding (NR_134520, exon 3 of 4)"	"non-coding (NR_134520, exon 3 of 4)"	18780	NR_134520	727993	Hs.551466	NR_134520	ENSG00000233896	LOC727993	-	uncharacterized LOC727993	ncRNA	16	1.46	10.95890411	3.44E-09
chr20-6527	chr20	2039871	2040871	+	16	1000	Intergenic	LTR33|LTR|ERVL	-42157	NM_080836	140901	Hs.100057	NM_080836	ENSG00000125834	STK35	CLIK1|STK35L1	serine/threonine kinase 35	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-6528	chr20	2062603	2065523	+	43.5	2920	Intergenic	AluJr|SINE|Alu	-18465	NM_080836	140901	Hs.100057	NM_080836	ENSG00000125834	STK35	CLIK1|STK35L1	serine/threonine kinase 35	protein-coding	43.53	7.77	5.602316602	3.96E-15
chr20-653	chr20	4202271	4203271	+	23.7	1000	"exon (NM_000678, exon 2 of 2)"	"exon (NM_000678, exon 2 of 2)"	26888	NM_000678	146	Hs.557	NM_000678	ENSG00000171873	ADRA1D	ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2	adrenoceptor alpha 1D	protein-coding	23.68	2.43	9.744855967	2.61E-12
chr20-6530	chr20	2071285	2072539	+	17.9	1254	Intergenic	AluSx|SINE|Alu	-10616	NM_080836	140901	Hs.100057	NM_080836	ENSG00000125834	STK35	CLIK1|STK35L1	serine/threonine kinase 35	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr20-6534	chr20	2262338	2263338	+	16	1000	Intergenic	Intergenic	-13775	NM_003245	7053	Hs.2022	NM_003245	ENSG00000125780	TGM3	TGE	transglutaminase 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-6539	chr20	2337197	2338197	+	15.4	1000	Intergenic	LTR16E1|LTR|ERVL	-23857	NM_198994	343641	Hs.452039	NM_198994	ENSG00000166948	TGM6	SCA35|TG6|TGM3L|TGY|dJ734P14.3	transglutaminase 6	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr20-655	chr20	5383870	5385142	+	27.5	1272	Intergenic	MSTA-int|LTR|ERVL-MaLR	41888	NR_038240	100507629	Hs.121383	NR_038239	ENSG00000226995	LINC00658	-	long intergenic non-protein coding RNA 658	ncRNA	27.52	6.31	4.36133122	6.42E-08
chr20-6569	chr20	3395881	3396881	+	16.6	1000	Intergenic	MSTA-int|LTR|ERVL-MaLR	-8072	NM_001009984	25943	Hs.516853	NM_001009984	ENSG00000088854	C20orf194	-	chromosome 20 open reading frame 194	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr20-6573	chr20	4005704	4006704	+	16.6	1000	Intergenic	Intergenic	-9966	NM_001321749	11237	Hs.547576	NM_007219	ENSG00000101236	RNF24	G1L	ring finger protein 24	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr20-6587	chr20	4358153	4359153	+	16.6	1000	Intergenic	Intergenic	-128994	NM_000678	146	Hs.557	NM_000678	ENSG00000171873	ADRA1D	ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2	adrenoceptor alpha 1D	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-6589	chr20	4507791	4508791	+	16.6	1000	Intergenic	L1MA9|LINE|L1	-158506	NM_001080121	5621	Hs.472010	NM_000311	ENSG00000171867	PRNP	ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30	prion protein	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr20-6593	chr20	4598955	4599955	+	14.1	1000	Intergenic	LTR26B|LTR|ERV1	-67342	NM_001080121	5621	Hs.472010	NM_000311	ENSG00000171867	PRNP	ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30	prion protein	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr20-6594	chr20	4606252	4607252	+	16.6	1000	Intergenic	MER21C|LTR|ERVL	-60045	NM_001080121	5621	Hs.472010	NM_000311	ENSG00000171867	PRNP	ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30	prion protein	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr20-6609	chr20	5350301	5351301	+	16	1000	Intergenic	MER39|LTR|ERV1	-53423	NM_144773	128674	Hs.375029	NM_144773	ENSG00000101292	PROKR2	GPR73L1|GPR73b|GPRg2|HH3|KAL3|PKR2|dJ680N4.3	prokineticin receptor 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr20-6612	chr20	5449962	5450962	+	16	1000	Intergenic	MER5B|DNA|hAT-Charlie	-1380	NR_029405	643406	Hs.431161	NM_175877		LOC643406	-	uncharacterized LOC643406	ncRNA	16	1.46	10.95890411	3.44E-09
chr20-6621	chr20	6319042	6320042	+	16	1000	Intergenic	MER45R|DNA|hAT-Tip100	-87837	NR_109953	101929244	Hs.542488	NR_109953	ENSG00000229876	CASC20	-	cancer susceptibility candidate 20 (non-protein coding)	ncRNA	16	3.4	4.705882353	2.25E-05
chr20-6623	chr20	6358663	6359663	+	16	1000	Intergenic	MLT1J|LTR|ERVL-MaLR	-48216	NR_109953	101929244	Hs.542488	NR_109953	ENSG00000229876	CASC20	-	cancer susceptibility candidate 20 (non-protein coding)	ncRNA	16	3.88	4.12371134	7.91E-05
chr20-6628	chr20	6697992	6698992	+	15.4	1000	Intergenic	Intergenic	-50253	NM_001200	650	Hs.73853	NM_001200	ENSG00000125845	BMP2	BDA2|BMP2A	bone morphogenetic protein 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr20-664	chr20	18030720	18031975	+	27.5	1255	"intron (NM_001303462, intron 1 of 2)"	"intron (NM_001303462, intron 1 of 2)"	7179	NM_021220	58495	Hs.661013	NM_021220	ENSG00000125850	OVOL2	EUROIMAGE566589|PPCD1|ZNF339	ovo like zinc finger 2	protein-coding	27.52	5.82	4.728522337	1.71E-08
chr20-6643	chr20	7826302	7827302	+	16	1000	Intergenic	L1MEc|LINE|L1	94291	NM_017545	54363	Hs.193640	NM_017545	ENSG00000101323	HAO1	GOX|GOX1|HAOX1	hydroxyacid oxidase 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-6653	chr20	9431598	9432598	+	16.6	1000	"intron (NM_000933, intron 28 of 35)"	"intron (NM_000933, intron 28 of 35)"	-62907	NM_001199897	24141	Hs.22920	NM_012261	ENSG00000125869	LAMP5	BAD-LAMP|BADLAMP|C20orf103|LAMP-5|UNC-46	lysosomal associated membrane protein family member 5	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-6659	chr20	10642099	10643392	+	19.8	1293	"intron (NM_000214, intron 3 of 25)"	L2c|LINE|L2	11949	NM_000214	182	Hs.224012	NM_000214	ENSG00000101384	JAG1	AGS|AGS1|AHD|AWS|CD339|HJ1|JAGL1	jagged 1	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr20-6661	chr20	10666528	10667528	+	16	1000	Intergenic	L1ME1|LINE|L1	-12334	NM_000214	182	Hs.224012	NM_000214	ENSG00000101384	JAG1	AGS|AGS1|AHD|AWS|CD339|HJ1|JAGL1	jagged 1	protein-coding	16	1.46	10.95890411	3.44E-09
chr20-6663	chr20	11125365	11126365	+	15.4	1000	Intergenic	MER103C|DNA|hAT-Charlie	128166	NR_038972	339593	Hs.434320	NR_038972		LOC339593	-	uncharacterized LOC339593	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr20-6665	chr20	11201820	11202820	+	16	1000	Intergenic	Intergenic	51711	NR_038972	339593	Hs.434320	NR_038972		LOC339593	-	uncharacterized LOC339593	ncRNA	16	2.91	5.498281787	4.98E-06
chr20-6666	chr20	11239997	11240997	+	16	1000	Intergenic	Intergenic	13534	NR_038972	339593	Hs.434320	NR_038972		LOC339593	-	uncharacterized LOC339593	ncRNA	16	3.88	4.12371134	7.91E-05
chr20-6671	chr20	12907385	12908385	+	16	1000	"intron (NR_109868, intron 4 of 11)"	"intron (NR_109868, intron 4 of 11)"	9726	NR_109872	102606466	Hs.602196	NR_109872		LOC102606466	-	uncharacterized LOC102606466	ncRNA	16	3.4	4.705882353	2.25E-05
chr20-6688	chr20	14044104	14045104	+	14.7	1000	"intron (NM_080676, intron 2 of 16)"	AluJb|SINE|Alu	68458	NM_080676	140733	Hs.661576	NM_080676	ENSG00000172264	MACROD2	C20orf133	MACRO domain containing 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-6695	chr20	16594445	16595445	+	16.6	1000	Intergenic	MER5C|DNA|hAT-Charlie	-40866	NM_001199866	55614	Hs.101774	NM_024704	ENSG00000089177	KIF16B	C20orf23|KISC20ORF|SNX23	kinesin family member 16B	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-6701	chr20	17022421	17023421	+	16.6	1000	Intergenic	Charlie10|DNA|hAT-Charlie	-183831	NM_001201528	5126	Hs.315186	NM_002594	ENSG00000125851	PCSK2	NEC 2|NEC-2|NEC2|PC2|SPC2	proprotein convertase subtilisin/kexin type 2	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr20-6704	chr20	17348388	17349388	+	16	1000	"intron (NM_002594, intron 4 of 11)"	"intron (NM_002594, intron 4 of 11)"	141291	NM_002594	5126	Hs.315186	NM_002594	ENSG00000125851	PCSK2	NEC 2|NEC-2|NEC2|PC2|SPC2	proprotein convertase subtilisin/kexin type 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-6705	chr20	17376325	17377325	+	16	1000	"intron (NM_002594, intron 5 of 11)"	"intron (NM_002594, intron 5 of 11)"	135189	NM_001195	631	Hs.129702	NM_001195	ENSG00000125864	BFSP1	CP115|CP94|CTRCT33|LIFL-H	beaded filament structural protein 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr20-6707	chr20	17426378	17427378	+	16	1000	"intron (NM_002594, intron 8 of 11)"	"intron (NM_002594, intron 8 of 11)"	85136	NM_001195	631	Hs.129702	NM_001195	ENSG00000125864	BFSP1	CP115|CP94|CTRCT33|LIFL-H	beaded filament structural protein 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-6736	chr20	18771259	18772259	+	16.6	1000	"intron (NR_026883, intron 2 of 3)"	"intron (NR_026883, intron 2 of 3)"	2867	NR_026884	29075	Hs.584899	NM_014162		LINC00652	HSPC072	long intergenic non-protein coding RNA 652	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr20-6737	chr20	18826256	18827256	+	16.6	1000	Intergenic	MSTB|LTR|ERVL-MaLR	-15909	NM_001302818	100128496	Hs.664484	NM_001242671		C20orf78	dJ1068E13.1	chromosome 20 open reading frame 78	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-6739	chr20	19023402	19024402	+	16.6	1000	Intergenic	Intergenic	-169388	NM_020689	57419	Hs.654790	NM_020689	ENSG00000185052	SLC24A3	NCKX3	solute carrier family 24 member 3	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-6741	chr20	19321902	19322902	+	15.4	1000	"intron (NM_020689, intron 2 of 16)"	"intron (NM_020689, intron 2 of 16)"	-57162	NR_024564	100130264	Hs.683814	NR_024564	ENSG00000179447	LOC100130264	-	uncharacterized LOC100130264	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr20-6743	chr20	19698205	19699205	+	15.4	1000	"intron (NM_020689, intron 16 of 16)"	"intron (NM_020689, intron 16 of 16)"	-168460	NM_001242581	54453	Hs.472270	NM_018993	ENSG00000132669	RIN2	MACS|RASSF4	Ras and Rab interactor 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr20-6746	chr20	19871122	19872122	+	16.6	1000	"intron (NM_001242581, intron 2 of 11)"	MER110|LTR|ERV1	1412	NM_018993	54453	Hs.472270	NM_018993	ENSG00000132669	RIN2	MACS|RASSF4	Ras and Rab interactor 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr20-6749	chr20	19922920	19923920	+	15.4	1000	"intron (NM_001242581, intron 3 of 11)"	"intron (NM_001242581, intron 3 of 11)"	53210	NM_018993	54453	Hs.472270	NM_018993	ENSG00000132669	RIN2	MACS|RASSF4	Ras and Rab interactor 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr20-6753	chr20	19980930	19981930	+	16.6	1000	"exon (NM_018993, exon 11 of 11)"	"exon (NM_018993, exon 11 of 11)"	-16504	NM_181528	51126	Hs.368783	NM_016100	ENSG00000173418	NAA20	NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1	"N(alpha)-acetyltransferase 20, NatB catalytic subunit"	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr20-6755	chr20	20057367	20058657	+	20.5	1290	"intron (NM_001167816, intron 5 of 12)"	L1ME1|LINE|L1	20722	NM_001167816	26074	Hs.729168	NM_015585	ENSG00000089101	CFAP61	C20orf26|CaM-IP3|dJ1002M8.3|dJ1178H5.4	cilia and flagella associated protein 61	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr20-6763	chr20	20721385	20722385	+	16	1000	Intergenic	LTR33|LTR|ERVL	-28619	NM_020343	57186	Hs.472285	NM_020343	ENSG00000188559	RALGAPA2	AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220	Ral GTPase activating protein catalytic alpha subunit 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-6767	chr20	20772091	20773091	+	16.6	1000	Intergenic	LTR16A2|LTR|ERVL	-79325	NM_020343	57186	Hs.472285	NM_020343	ENSG00000188559	RALGAPA2	AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220	Ral GTPase activating protein catalytic alpha subunit 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr20-6768	chr20	20814863	20816951	+	31.4	2088	Intergenic	Intergenic	-122641	NM_020343	57186	Hs.472285	NM_020343	ENSG00000188559	RALGAPA2	AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220	Ral GTPase activating protein catalytic alpha subunit 2	protein-coding	31.36	6.31	4.969889065	6.13E-10
chr20-677	chr20	31884340	31885601	+	25	1261	"intron (NM_033197, intron 6 of 15)"	AluSz6|SINE|Alu	14029	NM_033197	92747	Hs.65551	NM_033197	ENSG00000125999	BPIFB1	C20orf114|LPLUNC1	BPI fold containing family B member 1	protein-coding	24.96	4.37	5.711670481	4.38E-09
chr20-6772	chr20	20899923	20900923	+	16	1000	Intergenic	L1M4|LINE|L1	-206201	NM_001163022	55857	Hs.187635	NM_018474	ENSG00000088970	KIZ	C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69	kizuna centrosomal protein	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-6776	chr20	21003213	21004213	+	15.4	1000	Intergenic	MLT1H2|LTR|ERVL-MaLR	-102911	NM_001163022	55857	Hs.187635	NM_018474	ENSG00000088970	KIZ	C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69	kizuna centrosomal protein	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-6782	chr20	21476391	21477391	+	14.7	1000	Intergenic	AluSx|SINE|Alu	17773	NM_002509	4821	Hs.516922	NM_002509	ENSG00000125820	NKX2-2	NKX2.2|NKX2B	NK2 homeobox 2	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr20-6791	chr20	21669915	21670915	+	14.1	1000	"intron (NR_109878, intron 1 of 4)"	"intron (NR_109878, intron 1 of 4)"	13808	NR_109878	101929608	Hs.694665	NR_109878	ENSG00000280350	LINC01726	-	long intergenic non-protein coding RNA 1726	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr20-6806	chr20	22568450	22569450	+	16	1000	"intron (NR_109883, intron 2 of 2)"	AluSq2|SINE|Alu	-2849	NM_153675	3170	Hs.155651	NM_021784	ENSG00000125798	FOXA2	HNF3B|TCF3B	forkhead box A2	protein-coding	16	0.97	16.49484536	3.54E-11
chr20-6807	chr20	22638748	22639748	+	16.6	1000	Intergenic	Intergenic	-51093	NR_109883	101929685	Hs.563018	NR_109883	ENSG00000237396	LINC01384	-	long intergenic non-protein coding RNA 1384	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr20-6810	chr20	23023960	23024960	+	15.4	1000	Intergenic	Intergenic	5841	NM_000361	7056	Hs.2030	NM_000361	ENSG00000178726	THBD	AHUS6|BDCA3|CD141|THPH12|THRM|TM	thrombomodulin	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-6834	chr20	24364558	24365558	+	15.4	1000	Intergenic	Intergenic	-84777	NM_024893	79953	Hs.124638	NM_024893	ENSG00000101463	SYNDIG1	C20orf39|DSPC2|IFITMD5|TMEM90B	synapse differentiation inducing 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-6836	chr20	24524398	24525398	+	16.6	1000	"intron (NM_024893, intron 2 of 3)"	"intron (NM_024893, intron 2 of 3)"	74456	NM_001323607	79953	Hs.124638	NM_024893	ENSG00000101463	SYNDIG1	C20orf39|DSPC2|IFITMD5|TMEM90B	synapse differentiation inducing 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr20-6841	chr20	24759771	24760771	+	15.4	1000	Intergenic	Intergenic	-169595	NM_003650	8530	Hs.143212	NM_003650	ENSG00000077984	CST7	CMAP	cystatin F	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr20-6844	chr20	24801632	24803985	+	44.2	2353	Intergenic	Intergenic	-127058	NM_003650	8530	Hs.143212	NM_003650	ENSG00000077984	CST7	CMAP	cystatin F	protein-coding	44.17	7.28	6.067307692	6.36E-16
chr20-6862	chr20	29954126	29955126	+	16	1000	Intergenic	Intergenic	-1795	NM_054112	117285	Hs.274124	NM_054112	ENSG00000131068	DEFB118	C20orf63|DEFB-18|ESC42|ESP13.6	defensin beta 118	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-6863	chr20	30023396	30024396	+	16	1000	Intergenic	AluSx|SINE|Alu	-4426	NM_153324	245936	Hs.122509	NM_153324	ENSG00000180424	DEFB123	DEFB-23|DEFB23|ESC42-RELD	defensin beta 123	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-6871	chr20	30500609	30502868	+	33.9	2259	"intron (NR_134519, intron 7 of 17)"	"intron (NR_134519, intron 7 of 17)"	38145	NM_030815	81572	Hs.435755	NM_030815	ENSG00000088356	PDRG1	C20orf126|PDRG	p53 and DNA damage regulated 1	protein-coding	33.92	3.88	8.742268041	4.55E-16
chr20-6874	chr20	30602371	30603371	+	15.4	1000	"exon (NM_080625, exon 2 of 9)"	"exon (NM_080625, exon 2 of 9)"	4626	NM_080625	140706	Hs.382151	NM_080625	ENSG00000101331	CCM2L	C20orf160|dJ310O13.5	CCM2 like scaffolding protein	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr20-6877	chr20	30645391	30652839	+	96.7	7448	"intron (NM_001172132, intron 2 of 13)"	LTR16B2|LTR|ERVL	9124	NM_001172133	3055	Hs.655210	NM_002110	ENSG00000101336	HCK	JTK9|p59Hck|p61Hck	"HCK proto-oncogene, Src family tyrosine kinase"	protein-coding	96.65	22.81	4.237176677	6.31E-24
chr20-6879	chr20	30663406	30664406	+	16	1000	"intron (NM_002110, intron 5 of 12)"	AluSx|SINE|Alu	23915	NM_001172133	3055	Hs.655210	NM_002110	ENSG00000101336	HCK	JTK9|p59Hck|p61Hck	"HCK proto-oncogene, Src family tyrosine kinase"	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-6883	chr20	31194168	31197178	+	54.4	3010	"intron (NR_034152, intron 2 of 2)"	L2a|LINE|L2	20392	NR_034152	149950	Hs.516980	NM_001010976	ENSG00000204393	LOC149950	-	uncharacterized LOC149950	ncRNA	54.41	6.8	8.001470588	1.13E-23
chr20-6886	chr20	31518909	31519909	+	16	1000	Intergenic	AluSg|SINE|Alu	72830	NM_080675	140732	Hs.375186	NM_080675	ENSG00000167098	SUN5	SPAG4L|SPGF16|TSARG4|dJ726C3.1	Sad1 and UNC84 domain containing 5	protein-coding	16	3.4	4.705882353	2.25E-05
chr20-6897	chr20	31867374	31869189	+	30.1	1815	Intergenic	LTR78|LTR|ERV1	-2660	NM_033197	92747	Hs.65551	NM_033197	ENSG00000125999	BPIFB1	C20orf114|LPLUNC1	BPI fold containing family B member 1	protein-coding	30.08	6.8	4.423529412	1.16E-08
chr20-6903	chr20	32467412	32468412	+	16	1000	Intergenic	AluSx1|SINE|Alu	68802	NM_176812	128866	Hs.472471	NM_176812	ENSG00000101421	CHMP4B	C20orf178|CHMP4A|CTPP3|CTRCT31|SNF7|SNF7-2|Shax1|VPS32B|Vps32-2|dJ553F4.4	charged multivesicular body protein 4B	protein-coding	16	0.49	32.65306122	1.26E-14
chr20-6917	chr20	34709430	34710430	+	16.6	1000	"intron (NM_001258329, intron 2 of 22)"	MIR3|SINE|MIR	29298	NM_177996	2036	Hs.437422	NM_012156	ENSG00000088367	EPB41L1	4.1N|MRD11	erythrocyte membrane protein band 4.1 like 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr20-6920	chr20	34739609	34744438	+	100.5	4829	promoter-TSS (NM_012156)	promoter-TSS (NM_012156)	-639	NM_012156	2036	Hs.437422	NM_012156	ENSG00000088367	EPB41L1	4.1N|MRD11	erythrocyte membrane protein band 4.1 like 1	protein-coding	100.49	15.53	6.470701867	1.99E-36
chr20-6934	chr20	34896127	34897127	+	16	1000	"intron (NM_014902, intron 1 of 12)"	"intron (NM_014902, intron 1 of 12)"	2382	NM_014902	22839	Hs.249600	NM_014902	ENSG00000080845	DLGAP4	DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4	DLG associated protein 4	protein-coding	16	0.97	16.49484536	3.54E-11
chr20-6935	chr20	34950278	34951278	+	16	1000	"intron (NM_014902, intron 1 of 12)"	L2b|LINE|L2	56533	NM_014902	22839	Hs.249600	NM_014902	ENSG00000080845	DLGAP4	DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4	DLG associated protein 4	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-6942	chr20	35083497	35084497	+	16	1000	"intron (NM_014902, intron 7 of 12)"	MIR3|SINE|MIR	-5821	NM_001042486	22839	Hs.249600	NM_014902	ENSG00000080845	DLGAP4	DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4	DLG associated protein 4	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-6943	chr20	35493224	35494224	+	15.4	1000	Intergenic	Intergenic	-1637	NM_080627	140710	Hs.460807	NM_080627	ENSG00000149639	SOGA1	C20orf117|KIAA0889|SOGA	"suppressor of glucose, autophagy associated 1"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr20-696	chr20	44896425	44897865	+	26.9	1440	"intron (NM_021248, intron 1 of 11)"	"intron (NM_021248, intron 1 of 11)"	39992	NM_021248	64405	Hs.472861	NM_021248	ENSG00000149654	CDH22	C20orf25|dJ998H6.1	cadherin 22	protein-coding	26.88	6.31	4.259904913	6.42E-08
chr20-6969	chr20	36938026	36939298	+	21.1	1272	"intron (NM_001725, intron 3 of 14)"	MIRb|SINE|MIR	6110	NM_001725	671	Hs.529019	NM_001725	ENSG00000101425	BPI	BPIFD1|rBPI	bactericidal/permeability-increasing protein	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr20-697	chr20	44904287	44905545	+	26.9	1258	"intron (NM_021248, intron 1 of 11)"	L2c|LINE|L2	32221	NM_021248	64405	Hs.472861	NM_021248	ENSG00000149654	CDH22	C20orf25|dJ998H6.1	cadherin 22	protein-coding	26.88	5.34	5.033707865	3.94E-09
chr20-6990	chr20	38029778	38030778	+	16	1000	Intergenic	Tigger9b|DNA|TcMar-Tigger	-176887	NR_027124	339568	Hs.434319	NR_027124	ENSG00000230324	LINC01734	-	long intergenic non-protein coding RNA 1734	ncRNA	16	2.91	5.498281787	4.98E-06
chr20-6995	chr20	38335416	38339629	+	53.8	4213	Intergenic	Intergenic	-295581	NR_109936	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	53.77	12.62	4.260697306	2.65E-14
chr20-7003	chr20	38643183	38644183	+	15.4	1000	Intergenic	Intergenic	10580	NR_109937	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr20-7006	chr20	38932915	38933915	+	16	1000	Intergenic	Intergenic	300312	NR_109937	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	16	0.97	16.49484536	3.54E-11
chr20-7010	chr20	39077585	39079460	+	32	1875	Intergenic	Intergenic	239358	NM_005461	9935	Hs.169487	NM_005461	ENSG00000204103	MAFB	DURS3|KRML|MCTO	MAF bZIP transcription factor B	protein-coding	32	5.82	5.498281787	2.32E-11
chr20-702	chr20	45116576	45117903	+	25.6	1327	Intergenic	L1MEc|LINE|L1	-23308	NR_026640	7686	Hs.717103	NR_026640		MKRN7P	MKRNP3|ZNF127L5|dJ981L23.2	"makorin ring finger protein 7, pseudogene"	pseudo	25.6	5.82	4.39862543	7.99E-08
chr20-7027	chr20	40380534	40381534	+	16	1000	Intergenic	Intergenic	-133901	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-7032	chr20	40482931	40484642	+	25.6	1711	Intergenic	MLT1F|LTR|ERVL-MaLR	-236653	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	25.6	6.31	4.057052298	2.77E-07
chr20-7037	chr20	40630363	40631363	+	16	1000	Intergenic	L1M2|LINE|L1	-383730	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-7043	chr20	40952826	40953826	+	16.6	1000	"intron (NM_007050, intron 11 of 30)"	"intron (NM_007050, intron 11 of 30)"	-360797	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr20-7051	chr20	41509120	41510379	+	19.8	1259	"intron (NM_007050, intron 2 of 30)"	"intron (NM_007050, intron 2 of 30)"	195626	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	19.84	3.88	5.113402062	7.67E-07
chr20-7057	chr20	41887460	41888460	+	16.6	1000	Intergenic	MSTA|LTR|ERVL-MaLR	-69403	NM_133170	11122	Hs.526879	NM_007050	ENSG00000196090	PTPRT	RPTPrho	"protein tyrosine phosphatase, receptor type T"	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr20-706	chr20	47292717	47294276	+	28.2	1559	"intron (NM_020820, intron 13 of 39)"	"intron (NM_020820, intron 13 of 39)"	150924	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	28.16	3.4	8.282352941	1.50E-13
chr20-7060	chr20	41993553	41995561	+	32.6	2008	Intergenic	Intergenic	-91947	NM_006275	6431	Hs.684950	NM_006275	ENSG00000124193	SRSF6	B52|HEL-S-91|SFRS6|SRP55	serine and arginine rich splicing factor 6	protein-coding	32.64	3.4	9.6	2.00E-16
chr20-7063	chr20	42010571	42013271	+	39.7	2700	Intergenic	Intergenic	-74583	NM_006275	6431	Hs.684950	NM_006275	ENSG00000124193	SRSF6	B52|HEL-S-91|SFRS6|SRP55	serine and arginine rich splicing factor 6	protein-coding	39.69	9.71	4.08753862	1.52E-10
chr20-7066	chr20	42212482	42213482	+	16	1000	"intron (NM_001199264, intron 12 of 12)"	MLT1H|LTR|ERVL-MaLR	-6271	NM_001303458	51098	Hs.444332	NM_016004	ENSG00000101052	IFT52	C20orf9|CGI-53|NGD2|NGD5	intraflagellar transport 52	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-7068	chr20	42428439	42429439	+	16.6	1000	Intergenic	L2c|LINE|L2	-73297	NM_176791	149699	Hs.447626	NM_176791	ENSG00000124196	GTSF1L	C20orf65|FAM112A|dJ1028D15.4	gametocyte specific factor 1 like	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-7078	chr20	42655746	42659180	+	53.8	3434	"intron (NM_001098798, intron 3 of 7)"	"intron (NM_001098798, intron 3 of 7)"	82927	NM_001098798	84969	Hs.26608	NM_032883	ENSG00000124191	TOX2	C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1	TOX high mobility group box family member 2	protein-coding	53.77	7.77	6.92020592	1.47E-21
chr20-7080	chr20	42666632	42668737	+	35.8	2105	"intron (NM_001098798, intron 3 of 7)"	L2a|LINE|L2	93148	NM_001098798	84969	Hs.26608	NM_032883	ENSG00000124191	TOX2	C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1	TOX high mobility group box family member 2	protein-coding	35.84	6.31	5.679873217	7.13E-13
chr20-7092	chr20	42812725	42817535	+	73.6	4810	"exon (NM_020433, exon 1 of 6)"	"exon (NM_020433, exon 1 of 6)"	1088	NM_175913	57158	Hs.441737	NM_020433	ENSG00000149596	JPH2	CMH17|JP-2|JP2	junctophilin 2	protein-coding	73.61	16.99	4.332548558	5.57E-19
chr20-710	chr20	49904553	49905553	+	24.3	1000	Intergenic	Intergenic	164461	NR_036162	100422889		NR_036162	ENSG00000266761	MIR3194	mir-3194	microRNA 3194	ncRNA	24.32	4.85	5.01443299	2.27E-08
chr20-7100	chr20	42964507	42965761	+	19.2	1254	promoter-TSS (NM_178491)	promoter-TSS (NM_178491)	-664	NM_178491	140902	Hs.580807	NM_178491	ENSG00000101074	R3HDML	dJ881L22.3	R3H domain containing like	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr20-7102	chr20	43029404	43030404	+	16	1000	promoter-TSS (NM_001258355)	promoter-TSS (NM_001258355)	8	NM_178849	3172	Hs.116462	NM_000457	ENSG00000101076	HNF4A	FRTS4|HNF4|HNF4a7|HNF4a8|HNF4a9|HNF4alpha|MODY|MODY1|NR2A1|NR2A21|TCF|TCF14	hepatocyte nuclear factor 4 alpha	protein-coding	16	1.46	10.95890411	3.44E-09
chr20-7112	chr20	43184235	43185235	+	17.9	1000	"intron (NM_007066, intron 1 of 3)"	AluSc8|SINE|Alu	24313	NM_181804	11142	Hs.472831	NM_007066	ENSG00000168734	PKIG	PKI-gamma	cAMP-dependent protein kinase inhibitor gamma	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr20-7123	chr20	43748041	43749041	+	17.3	1000	Intergenic	AluJr4|SINE|Alu	4565	NM_080869	128488	Hs.352180	NM_080869	ENSG00000168703	WFDC12	C20orf122|SWAM2|WAP2|dJ211D12.4	WAP four-disulfide core domain 12	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr20-7125	chr20	43768601	43770260	+	26.9	1659	Intergenic	HERVL-int|LTR|ERVL	-16324	NM_080869	128488	Hs.352180	NM_080869	ENSG00000168703	WFDC12	C20orf122|SWAM2|WAP2|dJ211D12.4	WAP four-disulfide core domain 12	protein-coding	26.88	3.4	7.905882353	1.25E-12
chr20-7134	chr20	43936196	43939323	+	41.6	3127	promoter-TSS (NM_030592)	promoter-TSS (NM_030592)	-590	NM_003833	8785	Hs.278489	NM_003833	ENSG00000124159	MATN4	-	matrilin 4	protein-coding	41.61	9.71	4.285272915	3.58E-11
chr20-7139	chr20	44083233	44084535	+	20.5	1302	Intergenic	AluY|SINE|Alu	-14510	NM_006103	10406	Hs.2719	NM_006103	ENSG00000101443	WFDC2	EDDM4|HE4|WAP5|dJ461P17.6	WAP four-disulfide core domain 2	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr20-7145	chr20	44170336	44171336	+	14.7	1000	"intron (NM_001302861, intron 3 of 3)"	"intron (NM_001302861, intron 3 of 3)"	-2702	NM_080827	140870	Hs.673237	NM_080827	ENSG00000243543	WFDC6	C20orf171|HEL-S-295|WAP6|dJ461P17.11	WAP four-disulfide core domain 6	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr20-715	chr20	51813923	51814923	+	23.7	1000	"intron (NM_001193421, intron 1 of 2)"	"intron (NM_001193421, intron 1 of 2)"	12601	NM_001193421	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr20-7158	chr20	44638268	44640254	+	34.6	1986	"exon (NM_004994, exon 3 of 13)"	"exon (NM_004994, exon 3 of 13)"	1714	NM_004994	4318	Hs.297413	NM_004994	ENSG00000100985	MMP9	CLG4B|GELB|MANDP2|MMP-9	matrix metallopeptidase 9	protein-coding	34.56	6.8	5.082352941	2.10E-11
chr20-716	chr20	51817988	51819323	+	25	1335	"intron (NM_001193421, intron 1 of 2)"	"intron (NM_001193421, intron 1 of 2)"	16833	NM_001193421	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr20-7170	chr20	44870629	44871629	+	16	1000	"intron (NM_021248, intron 2 of 11)"	MIR|SINE|MIR	66008	NM_021248	64405	Hs.472861	NM_021248	ENSG00000149654	CDH22	C20orf25|dJ998H6.1	cadherin 22	protein-coding	16	0	16.4818808	1.26E-14
chr20-7181	chr20	44959098	44961571	+	41	2473	Intergenic	Intergenic	-23197	NM_021248	64405	Hs.472861	NM_021248	ENSG00000149654	CDH22	C20orf25|dJ998H6.1	cadherin 22	protein-coding	40.97	6.31	6.492868463	4.76E-16
chr20-7187	chr20	45079371	45080371	+	15.4	1000	Intergenic	Intergenic	6411	NR_045983	100130934	Hs.712133	NM_173643		ZNF663P	ZNF663	"zinc finger protein 663, pseudogene"	pseudo	15.36	1.94	7.917525773	7.67E-08
chr20-719	chr20	52685196	52687027	+	33.9	1831	"intron (NM_001316361, intron 1 of 9)"	"intron (NM_001316361, intron 1 of 9)"	-1087	NR_039913	100616225		NR_039913	ENSG00000265595	MIR4756	-	microRNA 4756	ncRNA	33.92	5.82	5.828178694	4.04E-12
chr20-7191	chr20	45186920	45188197	+	18.6	1277	"3' UTR (NM_001193339, exon 12 of 12)"	"3' UTR (NM_001193339, exon 12 of 12)"	-8345	NM_080721	128506	Hs.526636	NM_080721	ENSG00000149635	OCSTAMP	C20orf123|OC-STAMP|dJ257E24.3	osteoclast stimulatory transmembrane protein	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr20-7207	chr20	45475063	45476063	+	15.4	1000	Intergenic	Intergenic	-47700	NM_005244	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-7210	chr20	45544359	45545359	+	16	1000	"intron (NM_005244, intron 1 of 15)"	"intron (NM_005244, intron 1 of 15)"	21596	NM_172110	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding	16	2.43	6.58436214	7.90E-07
chr20-7217	chr20	45702808	45703808	+	16	1000	"intron (NM_005244, intron 7 of 15)"	MER102b|DNA|hAT-Charlie	-92301	NR_037410	100500814		NR_037410	ENSG00000264901	MIR3616	mir-3616	microRNA 3616	ncRNA	16	2.91	5.498281787	4.98E-06
chr20-7221	chr20	45729214	45730214	+	16.6	1000	"intron (NM_005244, intron 9 of 15)"	AluJr4|SINE|Alu	-65895	NR_037410	100500814		NR_037410	ENSG00000264901	MIR3616	mir-3616	microRNA 3616	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr20-7222	chr20	45761287	45762809	+	25.6	1522	"intron (NM_005244, intron 9 of 15)"	"intron (NM_005244, intron 9 of 15)"	-33561	NR_037410	100500814		NR_037410	ENSG00000264901	MIR3616	mir-3616	microRNA 3616	ncRNA	25.6	2.91	8.797250859	6.53E-13
chr20-7223	chr20	45796766	45798025	+	21.1	1259	"intron (NM_005244, intron 10 of 15)"	"intron (NM_005244, intron 10 of 15)"	1786	NR_037410	100500814		NR_037410	ENSG00000264901	MIR3616	mir-3616	microRNA 3616	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr20-7225	chr20	46056298	46057977	+	26.2	1679	Intergenic	LTR16A|LTR|ERVL	-71504	NM_183048	23613	Hs.446240	NM_012408	ENSG00000101040	ZMYND8	PRKCBP1|PRO2893|RACK7	zinc finger MYND-type containing 8	protein-coding	26.24	4.85	5.410309278	4.26E-09
chr20-7227	chr20	46311005	46312005	+	15.4	1000	"intron (NM_198596, intron 7 of 20)"	"intron (NM_198596, intron 7 of 20)"	103303	NM_018837	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr20-7228	chr20	46388661	46389661	+	15.4	1000	"intron (NM_198596, intron 1 of 20)"	LTR33|LTR|ERVL	25647	NM_018837	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-7240	chr20	46721674	46722674	+	16	1000	Intergenic	Intergenic	-103313	NR_110027	101927457	Hs.445823	NR_110027		LINC01522	-	long intergenic non-protein coding RNA 1522	ncRNA	16	2.91	5.498281787	4.98E-06
chr20-7241	chr20	46738899	46739899	+	16	1000	Intergenic	AluJr|SINE|Alu	-120538	NR_110027	101927457	Hs.445823	NR_110027		LINC01522	-	long intergenic non-protein coding RNA 1522	ncRNA	16	0.97	16.49484536	3.54E-11
chr20-7243	chr20	46814166	46815453	+	23	1287	Intergenic	Intergenic	-173845	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	23.04	4.85	4.750515464	1.15E-07
chr20-7244	chr20	46833181	46834181	+	15.4	1000	Intergenic	Intergenic	-154973	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr20-7254	chr20	47114240	47115240	+	16	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	126086	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	16	2.91	5.498281787	4.98E-06
chr20-7263	chr20	47234952	47235952	+	16	1000	Intergenic	Intergenic	208968	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	16	0	16.4818808	1.26E-14
chr20-7267	chr20	47386671	47389530	+	42.2	2859	"intron (NM_020820, intron 1 of 39)"	AluSq2|SINE|Alu	56320	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	42.25	9.22	4.582429501	2.16E-12
chr20-7269	chr20	47412878	47413878	+	16.6	1000	"intron (NM_020820, intron 1 of 39)"	L1ME3|LINE|L1	31042	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr20-7270	chr20	47429151	47432911	+	60.2	3760	"intron (NM_020820, intron 1 of 39)"	L2a|LINE|L2	13389	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	60.17	14.08	4.2734375	7.27E-16
chr20-7278	chr20	47959842	47960842	+	16	1000	Intergenic	Intergenic	63122	NR_003030	692057		NR_003030	ENSG00000212304	SNORD12	HBII-99|MIR1259|MIRN1259	"small nucleolar RNA, C/D box 12"	snoRNA	16	3.88	4.12371134	7.91E-05
chr20-7315	chr20	49008809	49009809	+	15.4	1000	Intergenic	AluJr|SINE|Alu	-71430	NR_109950	101927586	Hs.637665	NR_109950	ENSG00000233077	LINC01271	-	long intergenic non-protein coding RNA 1271	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr20-7323	chr20	49212367	49215148	+	35.8	2781	"intron (NR_110890, intron 14 of 21)"	AluSx1|SINE|Alu	11434	NR_030375	693230		NR_030375	ENSG00000208018	MIR645	MIRN645|hsa-mir-645	microRNA 645	ncRNA	35.84	7.77	4.612612613	8.02E-11
chr20-7324	chr20	49241214	49242214	+	16	1000	"intron (NR_110890, intron 2 of 21)"	AluJb|SINE|Alu	-10392	NR_031634	100302146		NR_031634	ENSG00000221091	MIR1302-5	MIRN1302-5|hsa-mir-1302-5	microRNA 1302-5	ncRNA	16	3.88	4.12371134	7.91E-05
chr20-7325	chr20	49307027	49309914	+	43.5	2887	promoter-TSS (NM_001290268)	promoter-TSS (NM_001290268)	-403	NM_001290268	140876	Hs.372578	NM_080829	ENSG00000042062	FAM65C	C20orf175|C20orf176	family with sequence similarity 65 member C	protein-coding	43.53	10.19	4.271835132	6.58E-12
chr20-7326	chr20	49404358	49405358	+	17.3	1000	Intergenic	MER46C|DNA|TcMar-Tigger	-6573	NM_017843	55653	Hs.381178	NM_017843	ENSG00000124243	BCAS4	CNOL	breast carcinoma amplified sequence 4	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr20-7333	chr20	49637639	49639483	+	32	1844	"intron (NM_002237, intron 1 of 2)"	"intron (NM_002237, intron 1 of 2)"	1114	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	32	6.8	4.705882353	5.32E-10
chr20-7338	chr20	49753730	49755474	+	30.7	1744	Intergenic	Intergenic	-114927	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	30.72	3.4	9.035294118	1.89E-15
chr20-7340	chr20	49774289	49775289	+	16	1000	Intergenic	Intergenic	-135114	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-7344	chr20	49877727	49878727	+	15.4	1000	Intergenic	LTR2B|LTR|ERV1	191287	NR_036162	100422889		NR_036162	ENSG00000266761	MIR3194	mir-3194	microRNA 3194	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr20-7357	chr20	51141914	51143509	+	33.9	1595	Intergenic	MER58A|DNA|hAT-Charlie	-94666	NR_110038	101927700	Hs.434465	NR_110038	ENSG00000234948	LINC01524	-	long intergenic non-protein coding RNA 1524	ncRNA	33.92	7.28	4.659340659	4.51E-10
chr20-7364	chr20	51638201	51639201	+	16.6	1000	"intron (NM_173485, intron 1 of 2)"	L4|LINE|RTE	49755	NM_173485	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr20-7366	chr20	51693650	51694650	+	16	1000	"intron (NM_173485, intron 1 of 2)"	L2c|LINE|L2	105204	NM_173485	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr20-7370	chr20	51740073	51741073	+	16	1000	"intron (NM_173485, intron 1 of 2)"	"intron (NM_173485, intron 1 of 2)"	-61249	NM_001193421	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-738	chr20	56445461	56446731	+	28.8	1270	Intergenic	Intergenic	-24354	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	28.8	6.31	4.564183835	1.42E-08
chr20-7396	chr20	52155897	52156897	+	16.6	1000	Intergenic	Intergenic	-12912	NR_110051	101927770		NR_110051		LOC101927770	-	uncharacterized LOC101927770	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr20-740	chr20	56492754	56494008	+	26.2	1254	Intergenic	MLT1L|LTR|ERVL-MaLR	22931	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	26.24	5.34	4.913857678	2.00E-08
chr20-7405	chr20	52743485	52744485	+	16	1000	Intergenic	Intergenic	46531	NM_000782	1591	Hs.89663	NM_000782	ENSG00000019186	CYP24A1	CP24|CYP24|HCAI|HCINF1|P450-CC24	cytochrome P450 family 24 subfamily A member 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-7424	chr20	54453063	54454063	+	15.4	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	126965	NM_080617	140689	Hs.126141	NM_080617	ENSG00000054803	CBLN4	CBLNL1	cerebellin 4 precursor	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr20-7429	chr20	54832067	54833067	+	15.4	1000	Intergenic	Intergenic	8779	NM_019888	4159	Hs.248018	NM_019888	ENSG00000124089	MC3R	BMIQ9|MC3|MC3-R|OB20|OQTL	melanocortin 3 receptor	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr20-7433	chr20	55016694	55017694	+	15.4	1000	"intron (NM_020356, intron 2 of 5)"	"intron (NM_020356, intron 2 of 5)"	-26447	NM_001283036	51507	Hs.517134	NM_016407	ENSG00000022277	RTFDC1	C20orf43|CDAO5|HSPC164|SHUJUN-3	replication termination factor 2 domain containing 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr20-7449	chr20	55436525	55437525	+	16	1000	Intergenic	Intergenic	232667	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-745	chr20	57171550	57172827	+	23	1277	"intron (NR_034147, intron 6 of 6)"	"intron (NR_034147, intron 6 of 6)"	-37640	NR_125359	79160	Hs.280135	NR_125359	ENSG00000268941	LINC01711	-	long intergenic non-protein coding RNA 1711	ncRNA	23.04	2.43	9.481481481	2.61E-12
chr20-7451	chr20	55452920	55453920	+	14.1	1000	Intergenic	THE1B|LTR|ERVL-MaLR	249062	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr20-7458	chr20	55592593	55594891	+	41	2298	Intergenic	Intergenic	-195010	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	40.97	8.74	4.687643021	2.55E-12
chr20-7466	chr20	55757007	55758801	+	35.8	1794	"intron (NM_001719, intron 4 of 6)"	"intron (NM_001719, intron 4 of 6)"	-30848	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	35.84	4.85	7.389690722	1.37E-15
chr20-7481	chr20	55897716	55903215	+	83.9	5499	Intergenic	Intergenic	-3818	NR_036219	100422883		NR_036219	ENSG00000266666	MIR4325	-	microRNA 4325	ncRNA	83.85	17.47	4.799656554	1.09E-23
chr20-7490	chr20	56074192	56084081	+	165.8	9889	"intron (NM_001269054, intron 7 of 8)"	AluY|SINE|Alu	20787	NM_001269041	140690	Hs.131543	NM_080618	ENSG00000124092	CTCFL	BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2	CCCTC-binding factor like	protein-coding	165.78	33.49	4.950134368	8.28E-47
chr20-7493	chr20	56090079	56093106	+	40.3	3027	"intron (NM_001269054, intron 3 of 8)"	AluJb|SINE|Alu	8331	NM_001269041	140690	Hs.131543	NM_080618	ENSG00000124092	CTCFL	BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2	CCCTC-binding factor like	protein-coding	40.33	6.31	6.391442155	3.11E-15
chr20-7496	chr20	56128533	56131685	+	49.9	3152	Intergenic	Intergenic	-6028	NM_002591	5105	Hs.1872	NM_002591	ENSG00000124253	PCK1	PEPCK-C|PEPCK1|PEPCKC	phosphoenolpyruvate carboxykinase 1	protein-coding	49.93	9.71	5.142121524	6.34E-16
chr20-7500	chr20	56191093	56193629	+	35.2	2536	"intron (NM_030776, intron 1 of 7)"	L2b|LINE|L2	3271	NM_001160419	81030	Hs.302123	NM_030776	ENSG00000124256	ZBP1	C20orf183|DAI|DLM-1|DLM1	Z-DNA binding protein 1	protein-coding	35.2	8.74	4.027459954	4.36E-09
chr20-751	chr20	57964440	57966940	+	46.1	2500	Intergenic	Intergenic	90208	NM_207032	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	46.09	8.25	5.586666667	7.02E-16
chr20-7513	chr20	56369509	56371538	+	35.8	2029	Intergenic	MIR|SINE|MIR	-83931	NM_199171	56937	Hs.517155	NM_020182	ENSG00000124225	PMEPA1	STAG1|TMEPAI	"prostate transmembrane protein, androgen induced 1"	protein-coding	35.84	6.31	5.679873217	7.13E-13
chr20-7522	chr20	56474982	56477159	+	30.1	2177	Intergenic	AluJr|SINE|Alu	5620	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	30.08	4.85	6.202061856	2.13E-11
chr20-7524	chr20	56481317	56482317	+	16	1000	Intergenic	Arthur1A|DNA|hAT-Tip100	11367	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	16	3.4	4.705882353	2.25E-05
chr20-7525	chr20	56484087	56485407	+	23	1320	Intergenic	Intergenic	14297	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	23.04	4.85	4.750515464	1.15E-07
chr20-7528	chr20	56578486	56580215	+	26.9	1729	Intergenic	Intergenic	108900	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	26.88	4.85	5.542268041	7.61E-10
chr20-7529	chr20	56665687	56669402	+	58.9	3715	Intergenic	MLT1B|LTR|ERVL-MaLR	-58439	NM_178456	128602	Hs.43977	NM_178456	ENSG00000124237	C20orf85	LLC1|bA196N14.1	chromosome 20 open reading frame 85	protein-coding	58.89	13.59	4.333333333	9.00E-16
chr20-7530	chr20	56679841	56680841	+	16.6	1000	Intergenic	Intergenic	-45642	NM_178456	128602	Hs.43977	NM_178456	ENSG00000124237	C20orf85	LLC1|bA196N14.1	chromosome 20 open reading frame 85	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-7535	chr20	56727008	56728593	+	26.9	1585	"intron (NM_178456, intron 1 of 3)"	AluSq2|SINE|Alu	1817	NM_178456	128602	Hs.43977	NM_178456	ENSG00000124237	C20orf85	LLC1|bA196N14.1	chromosome 20 open reading frame 85	protein-coding	26.88	6.31	4.259904913	6.42E-08
chr20-7539	chr20	56785828	56786828	+	15.4	1000	Intergenic	L1MB5|LINE|L1	17381	NM_001304369	140731	Hs.266571	NM_080674	ENSG00000124227	ANKRD60	C20orf86|bA196N14.3	ankyrin repeat domain 60	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr20-7544	chr20	57161326	57162326	+	15.4	1000	"intron (NR_034147, intron 6 of 6)"	"intron (NR_034147, intron 6 of 6)"	-48002	NR_125359	79160	Hs.280135	NR_125359	ENSG00000268941	LINC01711	-	long intergenic non-protein coding RNA 1711	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr20-7548	chr20	57188298	57190577	+	39	2279	"intron (NR_034147, intron 6 of 6)"	"intron (NR_034147, intron 6 of 6)"	-20391	NR_125359	79160	Hs.280135	NR_125359	ENSG00000268941	LINC01711	-	long intergenic non-protein coding RNA 1711	ncRNA	39.04	3.88	10.06185567	5.77E-20
chr20-7559	chr20	57382735	57383735	+	16.6	1000	Intergenic	Intergenic	9514	NR_029844	407022		NR_029844	ENSG00000268649	MIR296	MIRN296|miRNA296|mir-296	microRNA 296	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr20-7567	chr20	57517192	57518192	+	16	1000	Intergenic	Intergenic	-38571	NM_198976	51497	Hs.517148	NM_016397	ENSG00000101158	NELFCD	HSPC130|NELF-C|NELF-D|TH1|TH1L	negative elongation factor complex member C/D	protein-coding	16	3.4	4.705882353	2.25E-05
chr20-7573	chr20	57687048	57688048	+	16.6	1000	Intergenic	L1MC5|LINE|L1	-69647	NM_016045	51012	Hs.656865	NM_016045	ENSG00000101166	PRELID3B	C20orf45|SLMO2|dJ543J19.5	PRELI domain containing 3B	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-7580	chr20	57893528	57901551	+	137.6	8023	"intron (NM_207032, intron 4 of 4)"	"intron (NM_207032, intron 4 of 4)"	22057	NM_207032	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	137.62	33.98	4.050029429	7.34E-32
chr20-7588	chr20	57978809	57979809	+	16	1000	Intergenic	Intergenic	103827	NM_207032	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-7589	chr20	57985980	57987251	+	19.8	1271	Intergenic	MIR|SINE|MIR	111133	NM_207032	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr20-7592	chr20	57997445	58001736	+	67.2	4291	Intergenic	Intergenic	124108	NM_207032	1908	Hs.1408	NM_000114	ENSG00000124205	EDN3	ET-3|ET3|HSCR4|PPET3|WS4B	endothelin 3	protein-coding	67.21	16.5	4.073333333	2.24E-16
chr20-7598	chr20	58057924	58058924	+	16	1000	Intergenic	L1MB3|LINE|L1	-94140	NM_001199505	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-7606	chr20	58177467	58178467	+	16.6	1000	"intron (NM_001199505, intron 1 of 12)"	MIRb|SINE|MIR	-1635	NM_080672	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr20-7607	chr20	58187365	58190123	+	56.3	2758	"intron (NM_080672, intron 1 of 12)"	Charlie8|DNA|hAT-Charlie	9142	NM_080672	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	56.33	13.59	4.144959529	1.67E-14
chr20-7621	chr20	58337765	58338765	+	17.3	1000	"intron (NM_183246, intron 4 of 11)"	THE1D|LTR|ERVL-MaLR	42000	NM_183244	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr20-7622	chr20	58364075	58365075	+	16.6	1000	"intron (NM_001199505, intron 7 of 12)"	"intron (NM_001199505, intron 7 of 12)"	68310	NM_183244	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr20-764	chr20	61804832	61807580	+	44.8	2748	Intergenic	Intergenic	-3646	NR_029670	406909		NR_029670	ENSG00000207598	MIR124-3	MIRN124-3|MIRN124A3|mir-124-3	microRNA 124-3	ncRNA	44.81	9.71	4.614830072	3.88E-13
chr20-765	chr20	61851476	61852728	+	25	1252	Intergenic	Intergenic	-4564	NM_017798	54915	Hs.744852	NM_017798	ENSG00000149658	YTHDF1	C20orf21	YTH N6-methyladenosine RNA binding protein 1	protein-coding	24.96	2.91	8.577319588	5.77E-12
chr20-7652	chr20	59510766	59511766	+	16.6	1000	Intergenic	Intergenic	-142854	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr20-7655	chr20	59578606	59582369	+	57	3763	Intergenic	Intergenic	-73633	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	56.97	13.59	4.19205298	1.67E-14
chr20-7656	chr20	59594204	59595204	+	16.6	1000	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-59416	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr20-7657	chr20	59628352	59630045	+	29.4	1693	Intergenic	Intergenic	-24922	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	29.44	6.8	4.329411765	1.16E-08
chr20-7662	chr20	59704523	59712805	+	155.5	8282	Intergenic	Intergenic	54544	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	155.54	23.78	6.54079058	4.42E-56
chr20-7686	chr20	59984305	59985305	+	16.6	1000	"intron (NM_001794, intron 2 of 15)"	"intron (NM_001794, intron 2 of 15)"	-89672	NM_001252338	1002	Hs.473231	NM_001794	ENSG00000179242	CDH4	CAD4|R-CAD|RCAD	cadherin 4	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-7699	chr20	61024395	61025395	+	16	1000	Intergenic	Intergenic	-22266	NM_080833	140893	Hs.180374	NM_080833	ENSG00000130701	RBBP8NL	C20orf151	RBBP8 N-terminal like	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-7700	chr20	61027182	61033181	+	139.5	5999	Intergenic	Intergenic	20845	NM_080473	140628	Hs.352250	NM_080473	ENSG00000130700	GATA5	GATAS|bB379O24.1	GATA binding protein 5	protein-coding	139.54	17.96	7.769487751	6.80E-58
chr20-7709	chr20	61204794	61207624	+	46.7	2830	Intergenic	AluSz|SINE|Alu	44090	NR_029676	406923		NR_029676	ENSG00000174407	MIR133A2	MIRN133A2|mir-133a-2	microRNA 133a-2	ncRNA	46.73	10.68	4.375468165	1.21E-12
chr20-7710	chr20	61271032	61272032	+	18.6	1000	Intergenic	(A)n|Simple_repeat|Simple_repeat	-2265	NM_016354	28231	Hs.235782	NM_016354	ENSG00000101187	SLCO4A1	OATP-E|OATP1|OATP4A1|OATPE|OATPRP1|POAT|SLC21A12	solute carrier organic anion transporter family member 4A1	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr20-7719	chr20	61714562	61717255	+	43.5	2693	"non-coding (NR_033370, exon 4 of 5)"	"non-coding (NR_033370, exon 4 of 5)"	-16736	NR_003244	768096	Hs.549606	NR_003244		HAR1A	HAR1F|LINC00064|NCRNA00064	highly accelerated region 1A (non-protein coding)	ncRNA	43.53	5.82	7.479381443	9.68E-19
chr20-7720	chr20	61753943	61757817	+	82.6	3874	Intergenic	Intergenic	-22209	NR_003245	768097	Hs.635159	NR_003245	ENSG00000231133	HAR1B	HAR1R|LINC00065|NCRNA00065	highly accelerated region 1B (non-protein coding)	ncRNA	82.57	19.42	4.251802266	1.00E-20
chr20-7723	chr20	61880922	61885112	+	53.8	4190	"intron (NM_152864, intron 1 of 6)"	LTR13|LTR|ERVK	-2313	NR_024389	100192386	Hs.111539	NR_024389	ENSG00000275620	FLJ16779	-	uncharacterized LOC100192386	ncRNA	53.77	6.31	8.521394612	7.25E-25
chr20-7730	chr20	62015587	62016587	+	13.4	1000	Intergenic	L1MEc|LINE|L1	-23339	NM_001256573	1137	Hs.10734	NM_000744	ENSG00000101204	CHRNA4	BFNC|EBN|EBN1|NACHR|NACHRA4|NACRA4	cholinergic receptor nicotinic alpha 4 subunit	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr20-7736	chr20	62160213	62161213	+	16.6	1000	"3' UTR (NM_005975, exon 8 of 8)"	"3' UTR (NM_005975, exon 8 of 8)"	8010	NM_005975	5753	Hs.51133	NM_005975	ENSG00000101213	PTK6	BRK	protein tyrosine kinase 6	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr20-7737	chr20	62176117	62180499	+	77.4	4382	"intron (NM_080823, intron 1 of 7)"	"intron (NM_080823, intron 1 of 7)"	549	NM_080823	6725		NM_080823	ENSG00000125508	SRMS	C20orf148|PTK70|SRM|dJ697K14.1	src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites	protein-coding	77.45	8.74	8.861556064	1.63E-35
chr20-7751	chr20	62955853	62956853	+	16	1000	Intergenic	Intergenic	34615	NR_040415	140849	Hs.745565	NR_040415		LINC00266-1	C20orf69|NCRNA00266|NCRNA00266-1|bA476I15.3	long intergenic non-protein coding RNA 266-1	ncRNA	16	0.97	16.49484536	3.54E-11
chr20-776	chr20	877276	878592	+	23.7	1316	"intron (NM_015985, intron 1 of 8)"	HERVH-int|LTR|ERV1	19043	NM_015985	51378	Hs.278973	NM_015985	ENSG00000101280	ANGPT4	ANG3|ANG4	angiopoietin 4	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr20-777	chr20	894761	897736	+	51.8	2975	"intron (NM_015985, intron 1 of 8)"	L2a|LINE|L2	729	NM_015985	51378	Hs.278973	NM_015985	ENSG00000101280	ANGPT4	ANG3|ANG4	angiopoietin 4	protein-coding	51.85	12.13	4.274525969	1.43E-13
chr20-7781	chr20	708232	711799	+	58.2	3567	Intergenic	Intergenic	39213	NM_033409	113278	Hs.283865	NM_033409	ENSG00000101276	SLC52A3	BVVLS|BVVLS1|C20orf54|RFT2|RFVT3|bA371L19.1|hRFT2	solute carrier family 52 member 3	protein-coding	58.25	12.62	4.615689382	2.92E-16
chr20-7783	chr20	803740	804740	+	14.7	1000	Intergenic	Intergenic	-10100	NM_001289145	83541	Hs.574822	NM_031424	ENSG00000125898	FAM110A	C20orf55|F10|bA371L19.3	family with sequence similarity 110 member A	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-779	chr20	1262812	1266100	+	65.9	3288	"intron (NM_014723, intron 2 of 5)"	"intron (NM_014723, intron 2 of 5)"	17521	NM_014723	9751	Hs.323833	NM_014723	ENSG00000101298	SNPH	-	syntaphilin	protein-coding	65.93	15.53	4.245331616	8.65E-17
chr20-7794	chr20	984105	985105	+	16.6	1000	Intergenic	Intergenic	-1698	NM_001029871	343637	Hs.444980	NM_001029871	ENSG00000101282	RSPO4	C20orf182|CRISTIN4	R-spondin 4	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr20-7808	chr20	1715879	1716879	+	16	1000	Intergenic	CpG	44013	NR_037142	100289473	Hs.641525	NR_037142	ENSG00000232528	LOC100289473	-	cytoskeleton associated protein 2-like pseudogene	pseudo	16	2.91	5.498281787	4.98E-06
chr20-781	chr20	1925204	1928136	+	67.8	2932	Intergenic	Intergenic	-1186	NR_134520	727993	Hs.551466	NR_134520	ENSG00000233896	LOC727993	-	uncharacterized LOC727993	ncRNA	67.85	15.05	4.508305648	1.23E-18
chr20-7813	chr20	1851422	1852422	+	14.1	1000	Intergenic	L2a|LINE|L2	-22891	NM_001330728	140885	Hs.581021	NM_080792	ENSG00000198053	SIRPA	BIT|CD172A|MFR|MYD-1|P84|PTPNS1|SHPS1|SIRP	signal regulatory protein alpha	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr20-782	chr20	1970612	1971612	+	23.7	1000	"intron (NM_001190899, intron 1 of 2)"	"intron (NM_001190899, intron 1 of 2)"	2340	NM_001190892	5173	Hs.22584	NM_024411	ENSG00000101327	PDYN	ADCA|PENKB|SCA23	prodynorphin	protein-coding	23.68	5.82	4.068728522	1.51E-06
chr20-7822	chr20	1959762	1960762	+	16	1000	"3' UTR (NM_001190900, exon 4 of 4)"	"3' UTR (NM_001190900, exon 4 of 4)"	13190	NM_001190892	5173	Hs.22584	NM_024411	ENSG00000101327	PDYN	ADCA|PENKB|SCA23	prodynorphin	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-7825	chr20	2144109	2145456	+	21.8	1347	Intergenic	Intergenic	-42792	NM_001287682	388780	Hs.132163	NM_001287682		LOC388780	-	uncharacterized LOC388780	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr20-7830	chr20	2232256	2233256	+	15.4	1000	Intergenic	AluSz6|SINE|Alu	-43857	NM_003245	7053	Hs.2022	NM_003245	ENSG00000125780	TGM3	TGE	transglutaminase 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-7834	chr20	2277073	2278073	+	15.4	1000	"intron (NM_003245, intron 1 of 12)"	"intron (NM_003245, intron 1 of 12)"	960	NM_003245	7053	Hs.2022	NM_003245	ENSG00000125780	TGM3	TGE	transglutaminase 3	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr20-7837	chr20	2290178	2291604	+	23	1426	"exon (NM_003245, exon 3 of 13)"	"exon (NM_003245, exon 3 of 13)"	14278	NM_003245	7053	Hs.2022	NM_003245	ENSG00000125780	TGM3	TGE	transglutaminase 3	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr20-7840	chr20	2357243	2358243	+	15.4	1000	Intergenic	Intergenic	-3811	NM_198994	343641	Hs.452039	NM_198994	ENSG00000166948	TGM6	SCA35|TG6|TGM3L|TGY|dJ734P14.3	transglutaminase 6	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr20-7841	chr20	2389308	2390308	+	16	1000	"intron (NM_001254734, intron 9 of 11)"	L1MB3|LINE|L1	28254	NM_001254734	343641	Hs.452039	NM_198994	ENSG00000166948	TGM6	SCA35|TG6|TGM3L|TGY|dJ734P14.3	transglutaminase 6	protein-coding	16	1.94	8.24742268	7.67E-08
chr20-7843	chr20	2506757	2508274	+	25.6	1517	Intergenic	HAL1|LINE|L1	-2347	NM_001282495	79175	Hs.516846	NM_024325	ENSG00000088876	ZNF343	dJ734P14.5	zinc finger protein 343	protein-coding	25.6	5.82	4.39862543	7.99E-08
chr20-7859	chr20	2720585	2721585	+	16	1000	"intron (NR_138537, intron 7 of 17)"	"intron (NR_138537, intron 7 of 17)"	47561	NR_138537	57593	Hs.471955	NM_020833	ENSG00000088881	EBF4	COE4|O/E-4	early B-cell factor 4	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-7860	chr20	2727433	2728433	+	15.4	1000	"intron (NR_138537, intron 7 of 17)"	AluSx1|SINE|Alu	53359	NM_019609	56265	Hs.659346	NM_019609	ENSG00000088882	CPXM1	CPX1|CPXM	"carboxypeptidase X, M14 family member 1"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-7864	chr20	2788199	2789199	+	14.7	1000	Intergenic	MER5A1|DNA|hAT-Charlie	-6934	NM_001256538	128653	Hs.352187	NM_080739	ENSG00000258713	C20orf141	dJ860F19.4	chromosome 20 open reading frame 141	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr20-7869	chr20	3436217	3437510	+	21.1	1293	Intergenic	Intergenic	-14802	NM_139322	8455	Hs.276252	NM_012070	ENSG00000088812	ATRN	DPPT-L|MGCA	attractin	protein-coding	21.12	1.46	14.46575342	1.29E-13
chr20-787	chr20	2671461	2679644	+	153	8183	"intron (NR_138537, intron 2 of 17)"	"intron (NR_138537, intron 2 of 17)"	2028	NR_138537	57593	Hs.471955	NM_020833	ENSG00000088881	EBF4	COE4|O/E-4	early B-cell factor 4	protein-coding	152.98	31.06	4.92530586	4.25E-43
chr20-7878	chr20	4226596	4227596	+	15.4	1000	"intron (NM_000678, intron 1 of 1)"	L2b|LINE|L2	2563	NM_000678	146	Hs.557	NM_000678	ENSG00000171873	ADRA1D	ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2	adrenoceptor alpha 1D	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr20-7879	chr20	4283766	4284766	+	16	1000	Intergenic	Intergenic	-54607	NM_000678	146	Hs.557	NM_000678	ENSG00000171873	ADRA1D	ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2	adrenoceptor alpha 1D	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-7884	chr20	4384248	4385727	+	26.2	1479	Intergenic	Intergenic	-155328	NM_000678	146	Hs.557	NM_000678	ENSG00000171873	ADRA1D	ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2	adrenoceptor alpha 1D	protein-coding	26.24	4.85	5.410309278	4.26E-09
chr20-7897	chr20	5023985	5024985	+	14.7	1000	Intergenic	AluJb|SINE|Alu	-33546	NM_203327	9962	Hs.516866	NM_005116	ENSG00000089057	SLC23A2	NBTL1|SLC23A1|SVCT2|YSPL2|hSVCT2	solute carrier family 23 member 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr20-7902	chr20	5340460	5341460	+	16	1000	Intergenic	Intergenic	-43582	NM_144773	128674	Hs.375029	NM_144773	ENSG00000101292	PROKR2	GPR73L1|GPR73b|GPRg2|HH3|KAL3|PKR2|dJ680N4.3	prokineticin receptor 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-7906	chr20	5414883	5415883	+	14.1	1000	"intron (NR_038239, intron 2 of 4)"	"intron (NR_038239, intron 2 of 4)"	11011	NR_038240	100507629	Hs.121383	NR_038239	ENSG00000226995	LINC00658	-	long intergenic non-protein coding RNA 658	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr20-7908	chr20	5426226	5428506	+	33.3	2280	promoter-TSS (NR_038240)	promoter-TSS (NR_038240)	-972	NR_038239	100507629	Hs.121383	NR_038239	ENSG00000226995	LINC00658	-	long intergenic non-protein coding RNA 658	ncRNA	33.28	5.82	5.718213058	4.04E-12
chr20-7920	chr20	6363076	6364076	+	16	1000	Intergenic	Intergenic	-43803	NR_109953	101929244	Hs.542488	NR_109953	ENSG00000229876	CASC20	-	cancer susceptibility candidate 20 (non-protein coding)	ncRNA	16	1.46	10.95890411	3.44E-09
chr20-7929	chr20	6812126	6813126	+	19.8	1000	Intergenic	L3|LINE|CR1	63881	NM_001200	650	Hs.73853	NM_001200	ENSG00000125845	BMP2	BDA2|BMP2A	bone morphogenetic protein 2	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr20-7948	chr20	9047699	9051394	+	60.2	3695	promoter-TSS (NM_001172646)	promoter-TSS (NM_001172646)	-155	NM_001172646	5332	Hs.472101	NM_000933	ENSG00000101333	PLCB4	ARCND2|PI-PLC	phospholipase C beta 4	protein-coding	60.17	9.71	6.196704428	5.26E-22
chr20-7950	chr20	9088526	9089526	+	14.7	1000	"intron (NM_001172646, intron 1 of 37)"	L2a|LINE|L2	39325	NM_001172646	5332	Hs.472101	NM_000933	ENSG00000101333	PLCB4	ARCND2|PI-PLC	phospholipase C beta 4	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr20-7959	chr20	9539548	9540548	+	15.4	1000	"intron (NM_020341, intron 7 of 10)"	"intron (NM_020341, intron 7 of 10)"	-44403	NR_109957	101929329	Hs.589878	NR_109957	ENSG00000225988	LAMP5-AS1	-	LAMP5 antisense RNA 1	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr20-7980	chr20	11772412	11773412	+	15.4	1000	Intergenic	LTR35|LTR|ERV1	78451	NR_110635	728450	Hs.560990	NR_110635	ENSG00000228422	LINC00687	C20orf61|dJ1012F16.1	long intergenic non-protein coding RNA 687	ncRNA	15.36	0.49	31.34693878	1.26E-14
chr20-7981	chr20	12008348	12009348	+	16	1000	Intergenic	MLT1H2|LTR|ERVL-MaLR	110335	NM_014962	22903	Hs.709366	NM_014962	ENSG00000132640	BTBD3	dJ742J24.1	BTB domain containing 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-7982	chr20	12723012	12724273	+	21.1	1261	Intergenic	Intergenic	193969	NR_109872	102606466	Hs.602196	NR_109872		LOC102606466	-	uncharacterized LOC102606466	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr20-7989	chr20	13082398	13084439	+	32.6	2041	"intron (NM_018327, intron 6 of 11)"	"intron (NM_018327, intron 6 of 11)"	93791	NM_018327	55304	Hs.425023	NM_018327	ENSG00000172296	SPTLC3	C20orf38|LCB2B|LCB3|SPT3|SPTLC2L|dJ718P11|dJ718P11.1|hLCB2b	serine palmitoyltransferase long chain base subunit 3	protein-coding	32.64	5.82	5.608247423	2.32E-11
chr20-7999	chr20	13841413	13842413	+	14.1	1000	"intron (NR_073207, intron 16 of 18)"	AluJb|SINE|Alu	76241	NR_029377	79133	Hs.472165	NM_024120	ENSG00000101247	NDUFAF5	C20orf7|bA526K24.2|dJ842G6.1	NADH:ubiquinone oxidoreductase complex assembly factor 5	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr20-8005	chr20	15561962	15562962	+	14.1	1000	"intron (NM_080676, intron 8 of 16)"	LTR50|LTR|ERVL	341497	NR_130925	613266	Hs.309149	NR_130924		LOC613266	-	uncharacterized LOC613266	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr20-8030	chr20	17461851	17463221	+	17.9	1370	"exon (NM_001201528, exon 13 of 13)"	"exon (NM_001201528, exon 13 of 13)"	49478	NM_001195	631	Hs.129702	NM_001195	ENSG00000125864	BFSP1	CP115|CP94|CTRCT33|LIFL-H	beaded filament structural protein 1	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr20-8032	chr20	17466960	17468460	+	25	1500	Intergenic	Intergenic	44304	NM_001195	631	Hs.129702	NM_001195	ENSG00000125864	BFSP1	CP115|CP94|CTRCT33|LIFL-H	beaded filament structural protein 1	protein-coding	24.96	2.91	8.577319588	5.77E-12
chr20-8039	chr20	17747016	17748301	+	20.5	1285	Intergenic	L2a|LINE|L2	67065	NM_001014977	140836	Hs.115366	NM_178477	ENSG00000125888	BANF2	BAF-L|BAF2|BAFL|C20orf179	barrier to autointegration factor 2	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr20-8049	chr20	18044651	18045651	+	15.4	1000	Intergenic	L1ME3D|LINE|L1	-5319	NM_001303461	58495	Hs.661013	NM_021220	ENSG00000125850	OVOL2	EUROIMAGE566589|PPCD1|ZNF339	ovo like zinc finger 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-8054	chr20	18236662	18238246	+	23.7	1584	Intergenic	LTR53|LTR|ERVL	-31473	NM_001282996	7692	Hs.472221	NM_003434	ENSG00000125846	ZNF133	ZNF150|pHZ-13|pHZ-66	zinc finger protein 133	protein-coding	23.68	5.34	4.434456929	4.49E-07
chr20-8063	chr20	19827549	19828549	+	15.4	1000	Intergenic	Intergenic	-39116	NM_001242581	54453	Hs.472270	NM_018993	ENSG00000132669	RIN2	MACS|RASSF4	Ras and Rab interactor 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr20-8065	chr20	19864095	19865095	+	17.3	1000	Intergenic	Intergenic	-2570	NM_001242581	54453	Hs.472270	NM_018993	ENSG00000132669	RIN2	MACS|RASSF4	Ras and Rab interactor 2	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr20-8069	chr20	20083162	20084162	+	16	1000	"intron (NM_001167816, intron 7 of 12)"	"intron (NM_001167816, intron 7 of 12)"	46372	NM_001167816	26074	Hs.729168	NM_015585	ENSG00000089101	CFAP61	C20orf26|CaM-IP3|dJ1002M8.3|dJ1178H5.4	cilia and flagella associated protein 61	protein-coding	16	2.43	6.58436214	7.90E-07
chr20-8079	chr20	20752317	20753317	+	16.6	1000	Intergenic	LOR1b|LTR|ERV1	-59551	NM_020343	57186	Hs.472285	NM_020343	ENSG00000188559	RALGAPA2	AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220	Ral GTPase activating protein catalytic alpha subunit 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-8083	chr20	20889603	20890603	+	15.4	1000	Intergenic	LTR39|LTR|ERV1	-196837	NM_020343	57186	Hs.472285	NM_020343	ENSG00000188559	RALGAPA2	AS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220	Ral GTPase activating protein catalytic alpha subunit 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr20-8087	chr20	21012548	21013817	+	19.8	1269	Intergenic	L1PB2|LINE|L1	-93442	NM_001163022	55857	Hs.187635	NM_018474	ENSG00000088970	KIZ	C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69	kizuna centrosomal protein	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr20-8092	chr20	21537485	21538799	+	20.5	1314	Intergenic	Intergenic	-12520	NR_109880	101929625	Hs.542413	NR_109880		LINC01727	-	long intergenic non-protein coding RNA 1727	ncRNA	20.48	0.97	21.11340206	2.68E-16
chr20-8116	chr20	22660761	22661761	+	15.4	1000	Intergenic	Intergenic	-73106	NR_109883	101929685	Hs.563018	NR_109883	ENSG00000237396	LINC01384	-	long intergenic non-protein coding RNA 1384	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr20-8117	chr20	22823929	22824929	+	14.1	1000	Intergenic	Intergenic	-191628	NM_001052	6754	Hs.673846	NM_001052	ENSG00000132671	SSTR4	SS-4-R|SS4-R|SS4R	somatostatin receptor 4	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr20-8122	chr20	23498239	23499239	+	16	1000	Intergenic	Intergenic	-1044	NR_001279	164380	Hs.400007	NR_001279	ENSG00000204663	CST13P	CSTT|CTES6	"cystatin 13, pseudogene"	pseudo	16	2.43	6.58436214	7.90E-07
chr20-8123	chr20	23527781	23529401	+	29.4	1620	Intergenic	Intergenic	20795	NM_080610	128821	Hs.121554	NM_080610	ENSG00000101435	CST9L	CTES7B|bA218C14.1	cystatin 9-like	protein-coding	29.44	3.88	7.587628866	2.58E-13
chr20-8124	chr20	23606534	23607534	+	16	1000	Intergenic	LTR64|LTR|ERV1	11651	NM_000099	1471	Hs.304682	NM_000099	ENSG00000101439	CST3	ARMD11|HEL-S-2	cystatin C	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-8126	chr20	23653551	23654551	+	16	1000	Intergenic	MLT1I|LTR|ERVL-MaLR	15611	NM_001899	1472	Hs.654549	NM_001899	ENSG00000101441	CST4	-	cystatin S	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-813	chr20	24849104	24858400	+	169	9296	Intergenic	Intergenic	-76114	NM_003650	8530	Hs.143212	NM_003650	ENSG00000077984	CST7	CMAP	cystatin F	protein-coding	168.98	40.77	4.144714251	4.44E-40
chr20-8131	chr20	24160459	24161459	+	15.4	1000	Intergenic	MLT1F|LTR|ERVL-MaLR	-19444	NR_040102	400839	Hs.651965	NR_040102	ENSG00000230133	LINC01721	-	long intergenic non-protein coding RNA 1721	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr20-8140	chr20	24449122	24451604	+	37.8	2482	promoter-TSS (NM_001323607)	promoter-TSS (NM_001323607)	-79	NM_001323607	79953	Hs.124638	NM_024893	ENSG00000101463	SYNDIG1	C20orf39|DSPC2|IFITMD5|TMEM90B	synapse differentiation inducing 1	protein-coding	37.76	3.88	9.731958763	5.72E-19
chr20-8145	chr20	24697057	24698057	+	16	1000	Intergenic	L1MB7|LINE|L1	-232309	NM_003650	8530	Hs.143212	NM_003650	ENSG00000077984	CST7	CMAP	cystatin F	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-8152	chr20	24797581	24798581	+	15.4	1000	Intergenic	Intergenic	-131785	NM_003650	8530	Hs.143212	NM_003650	ENSG00000077984	CST7	CMAP	cystatin F	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-8156	chr20	24872521	24873521	+	14.1	1000	Intergenic	Intergenic	-56845	NM_003650	8530	Hs.143212	NM_003650	ENSG00000077984	CST7	CMAP	cystatin F	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr20-8165	chr20	26158683	26159683	+	14.7	1000	Intergenic	L2|LINE|L2	29731	NR_030386	724033		NR_030386	ENSG00000227195	MIR663A	MIR663|MIRN663|hsa-mir-663|hsa-mir-663a|mir-663a	microRNA 663a	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr20-8181	chr20	30494192	30495192	+	15.4	1000	"intron (NR_134519, intron 5 of 17)"	AluSx3|SINE|Alu	-36145	NM_080611	128853	Hs.434108	NM_080611	ENSG00000149599	DUSP15	C20orf57|VHY	dual specificity phosphatase 15	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-8182	chr20	30580464	30582876	+	52.5	2412	"intron (NM_001011718, intron 1 of 2)"	L2b|LINE|L2	-14520	NR_106988	102465753		NR_106988	ENSG00000280494	MIR7641-2	B-ATF|hsa-mir-7641-2	microRNA 7641-2	ncRNA	52.49	11.65	4.505579399	8.89E-15
chr20-8197	chr20	31587687	31588687	+	16	1000	"intron (NM_080675, intron 4 of 12)"	"intron (NM_080675, intron 4 of 12)"	4052	NM_080675	140732	Hs.375186	NM_080675	ENSG00000167098	SUN5	SPAG4L|SPGF16|TSARG4|dJ726C3.1	Sad1 and UNC84 domain containing 5	protein-coding	16	2.43	6.58436214	7.90E-07
chr20-8204	chr20	31671988	31672988	+	16	1000	"intron (NM_182519, intron 3 of 15)"	L1ME4a|LINE|L1	3170	NM_182519	149954	Hs.38961	NM_182519	ENSG00000186191	BPIFB4	C20orf186|LPLUNC4|RY2G5|dJ726C3.5	BPI fold containing family B member 4	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-8205	chr20	31713568	31714568	+	16	1000	Intergenic	MIRb|SINE|MIR	-35586	NM_001319164	140683	Hs.125960	NM_080574	ENSG00000131050	BPIFA2	C20orf70|PSP|SPLUNC2|bA49G10.1	BPI fold containing family A member 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-8208	chr20	31793313	31795785	+	39.7	2472	"intron (NR_026760, intron 7 of 8)"	AluSz|SINE|Alu	-10567	NM_001042439	128861	Hs.360989	NM_178466	ENSG00000131059	BPIFA3	C20orf71|SPLUNC3	BPI fold containing family A member 3	protein-coding	39.69	7.28	5.451923077	1.26E-13
chr20-8227	chr20	34188209	34190542	+	40.3	2333	"intron (NR_119376, intron 14 of 43)"	CpG	6109	NR_119376	80307	Hs.72222	NR_001442	ENSG00000088340	FER1L4	C20orf124	"fer-1 like family member 4, pseudogene"	pseudo	40.33	3.88	10.3943299	5.62E-21
chr20-8254	chr20	34864865	34865865	+	17.9	1000	Intergenic	Intergenic	-28880	NM_014902	22839	Hs.249600	NM_014902	ENSG00000080845	DLGAP4	DAP-4|DAP4|DLP4|SAPAP-4|SAPAP4	DLG associated protein 4	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr20-8274	chr20	36536925	36539031	+	33.3	2106	"intron (NM_080607, intron 1 of 3)"	"intron (NM_080607, intron 1 of 3)"	6479	NM_080607	128434	Hs.517029	NM_080607	ENSG00000132821	VSTM2L	C20orf102|dJ1118M15.2	V-set and transmembrane domain containing 2 like	protein-coding	33.28	5.34	6.232209738	6.04E-13
chr20-8278	chr20	36770747	36774989	+	70.4	4242	"intron (NM_001323318, intron 5 of 11)"	"intron (NM_001323318, intron 5 of 11)"	20963	NM_004613	7052	Hs.517033	NM_004613	ENSG00000198959	TGM2	TG(C)|TGC	transglutaminase 2	protein-coding	70.41	16.5	4.267272727	3.00E-18
chr20-8280	chr20	36790911	36793776	+	42.2	2865	"intron (NM_001323316, intron 2 of 13)"	"intron (NM_001323316, intron 2 of 13)"	1488	NM_004613	7052	Hs.517033	NM_004613	ENSG00000198959	TGM2	TG(C)|TGC	transglutaminase 2	protein-coding	42.25	8.74	4.83409611	5.23E-13
chr20-8283	chr20	36798071	36799071	+	16	1000	Intergenic	L2b|LINE|L2	-3591	NM_001323316	7052	Hs.517033	NM_004613	ENSG00000198959	TGM2	TG(C)|TGC	transglutaminase 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-8286	chr20	36843088	36844449	+	19.8	1361	"intron (NM_001029864, intron 13 of 13)"	"intron (NM_001029864, intron 13 of 13)"	-44809	NR_104170	149684	Hs.628250	NR_104170	ENSG00000101425	LOC149684	-	uncharacterized LOC149684	ncRNA	19.84	3.88	5.113402062	7.67E-07
chr20-8289	chr20	36894281	36895281	+	15.4	1000	"intron (NR_104170, intron 1 of 1)"	L1MA2|LINE|L1	-5607	NM_001029864	85449	Hs.472690	NM_001029864	ENSG00000149633	KIAA1755	-	KIAA1755	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-8294	chr20	36957734	36958734	+	15.4	1000	"intron (NM_001725, intron 11 of 14)"	AluSz|SINE|Alu	-16580	NM_004139	3929	Hs.154078	NM_004139	ENSG00000129988	LBP	BPIFD2	lipopolysaccharide binding protein	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-8298	chr20	37235526	37236526	+	16	1000	"intron (NM_001164431, intron 1 of 14)"	"intron (NM_001164431, intron 1 of 14)"	5449	NM_001164431	343578	Hs.451997	NM_001164431	ENSG00000124143	ARHGAP40	C20orf95|dJ1100H13.4	Rho GTPase activating protein 40	protein-coding	16	1.94	8.24742268	7.67E-08
chr20-8304	chr20	37350398	37353872	+	72.3	3474	promoter-TSS (NM_080552)	promoter-TSS (NM_080552)	-970	NM_080552	140679	Hs.179080	NM_080552	ENSG00000101438	SLC32A1	VGAT|VIAAT	solute carrier family 32 member 1	protein-coding	72.33	14.56	4.96771978	2.74E-21
chr20-8306	chr20	37679363	37680363	+	15.4	1000	Intergenic	Intergenic	88882	NM_021931	60625	Hs.444520	NM_021931	ENSG00000101452	DHX35	C20orf15|DDX35|KAIA0875	DEAH-box helicase 35	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr20-8317	chr20	38281278	38283153	+	30.1	1875	Intergenic	Intergenic	-350888	NR_109936	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	30.08	5.82	5.16838488	6.85E-10
chr20-8322	chr20	38478254	38479254	+	16	1000	Intergenic	Intergenic	-154349	NR_109936	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	16	3.4	4.705882353	2.25E-05
chr20-8331	chr20	38848463	38849463	+	14.7	1000	Intergenic	Intergenic	215860	NR_109937	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr20-8335	chr20	38909850	38910850	+	14.7	1000	Intergenic	L2b|LINE|L2	277247	NR_109937	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr20-8342	chr20	39216785	39217785	+	15.4	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	100595	NM_005461	9935	Hs.169487	NM_005461	ENSG00000204103	MAFB	DURS3|KRML|MCTO	MAF bZIP transcription factor B	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr20-8345	chr20	39271412	39272412	+	17.3	1000	Intergenic	Intergenic	45968	NM_005461	9935	Hs.169487	NM_005461	ENSG00000204103	MAFB	DURS3|KRML|MCTO	MAF bZIP transcription factor B	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr20-8368	chr20	40253948	40254948	+	15.4	1000	Intergenic	AluSx|SINE|Alu	-7315	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr20-837	chr20	40518165	40519165	+	23.7	1000	Intergenic	Intergenic	-271532	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr20-8373	chr20	40383223	40384223	+	16	1000	Intergenic	AluSx3|SINE|Alu	-136590	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	16	3.4	4.705882353	2.25E-05
chr20-8374	chr20	40397826	40398826	+	16.6	1000	Intergenic	Intergenic	-151193	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr20-8376	chr20	40404176	40405176	+	14.7	1000	Intergenic	Intergenic	-157543	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr20-8387	chr20	40694665	40696218	+	25	1553	Intergenic	L1M6|LINE|L1	-448308	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	24.96	4.37	5.711670481	4.38E-09
chr20-8389	chr20	40726854	40727854	+	15.4	1000	"intron (NM_007050, intron 26 of 30)"	"intron (NM_007050, intron 26 of 30)"	-480221	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr20-839	chr20	41799938	41801613	+	39.7	1675	"intron (NM_007050, intron 1 of 30)"	LTR33|LTR|ERVL	17782	NM_007050	11122	Hs.526879	NM_007050	ENSG00000196090	PTPRT	RPTPrho	"protein tyrosine phosphatase, receptor type T"	protein-coding	39.69	7.77	5.108108108	6.49E-13
chr20-8390	chr20	40745595	40746595	+	16	1000	"intron (NM_007050, intron 21 of 30)"	"intron (NM_007050, intron 21 of 30)"	-498962	NM_032221	84181	Hs.740645	NM_032221	ENSG00000124177	CHD6	CHD-6|CHD5|RIGB	chromodomain helicase DNA binding protein 6	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-8393	chr20	40977483	40978483	+	16	1000	"intron (NM_007050, intron 11 of 30)"	"intron (NM_007050, intron 11 of 30)"	-336140	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	16	0.97	16.49484536	3.54E-11
chr20-8394	chr20	40983563	40984563	+	15.4	1000	"intron (NM_007050, intron 9 of 30)"	LTR16C|LTR|ERVL	-330060	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr20-8396	chr20	41014767	41015767	+	14.7	1000	"intron (NM_007050, intron 9 of 30)"	AluSg7|SINE|Alu	-298856	NR_110004	101927159	Hs.570383	NR_110004	ENSG00000229042	LOC101927159	-	uncharacterized LOC101927159	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr20-8406	chr20	41765472	41766783	+	24.3	1311	"intron (NM_007050, intron 1 of 30)"	MER58A|DNA|hAT-Charlie	52430	NM_007050	11122	Hs.526879	NM_007050	ENSG00000196090	PTPRT	RPTPrho	"protein tyrosine phosphatase, receptor type T"	protein-coding	24.32	5.82	4.178694158	3.56E-07
chr20-8423	chr20	42399402	42400402	+	16	1000	Intergenic	Intergenic	-44260	NM_176791	149699	Hs.447626	NM_176791	ENSG00000124196	GTSF1L	C20orf65|FAM112A|dJ1028D15.4	gametocyte specific factor 1 like	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-8435	chr20	42607375	42609067	+	29.4	1692	"intron (NM_001098798, intron 2 of 7)"	L1MA2|LINE|L1	33685	NM_001098798	84969	Hs.26608	NM_032883	ENSG00000124191	TOX2	C20orf100|GCX-1|GCX1|dJ1108D11.2|dJ495O3.1	TOX high mobility group box family member 2	protein-coding	29.44	7.28	4.043956044	3.95E-08
chr20-8448	chr20	42757827	42759139	+	20.5	1312	"intron (NM_020433, intron 2 of 5)"	MLT1D|LTR|ERVL-MaLR	57735	NM_175913	57158	Hs.441737	NM_020433	ENSG00000149596	JPH2	CMH17|JP-2|JP2	junctophilin 2	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr20-8461	chr20	43077335	43078335	+	15.4	1000	"intron (NR_109893, intron 2 of 2)"	"intron (NR_109893, intron 2 of 2)"	1362	NR_109893	101927242	Hs.143307	NR_109893	ENSG00000168746	LINC01430	-	long intergenic non-protein coding RNA 1430	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr20-8464	chr20	43090861	43091861	+	15.4	1000	"intron (NR_132342, intron 1 of 1)"	L1ME1|LINE|L1	2623	NR_132343	140834	Hs.357589	NM_001287807	ENSG00000168746	LINC01620	C20orf62|dJ1013A22.3	long intergenic non-protein coding RNA 1620	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr20-8478	chr20	43437246	43440414	+	39	3168	"exon (NM_001205317, exon 1 of 6)"	"exon (NM_001205317, exon 1 of 6)"	149	NM_182970	140730	Hs.517065	NM_182970	ENSG00000101098	RIMS4	C20orf190|RIM 4|RIM-4|RIM4|RIM4-gamma|RIM4gamma	regulating synaptic membrane exocytosis 4	protein-coding	39.04	6.8	5.741176471	1.26E-13
chr20-8484	chr20	43462004	43463004	+	14.7	1000	Intergenic	AluSq2|SINE|Alu	-23525	NM_001205317	140730	Hs.517065	NM_182970	ENSG00000101098	RIMS4	C20orf190|RIM 4|RIM-4|RIM4|RIM4-gamma|RIM4gamma	regulating synaptic membrane exocytosis 4	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-8491	chr20	43803476	43806616	+	49.3	3140	"3' UTR (NM_002638, exon 3 of 3)"	"3' UTR (NM_002638, exon 3 of 3)"	1506	NM_002638	5266	Hs.112341	NM_002638	ENSG00000124102	PI3	ESI|SKALP|WAP3|WFDC14|cementoin	peptidase inhibitor 3	protein-coding	49.29	10.68	4.615168539	5.88E-14
chr20-8508	chr20	44133992	44134992	+	16.6	1000	Intergenic	Intergenic	9772	NM_006652	10816	Hs.370724	NM_006652	ENSG00000101446	SPINT3	HKIB9	"serine peptidase inhibitor, Kunitz type 3"	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-8513	chr20	44271374	44272374	+	16	1000	Intergenic	AluSz6|SINE|Alu	-11967	NM_147198	259240	Hs.249828	NM_147198	ENSG00000180205	WFDC9	WAP9|dJ688G8.2	WAP four-disulfide core domain 9	protein-coding	16	3.4	4.705882353	2.25E-05
chr20-8528	chr20	44786165	44787165	+	16	1000	Intergenic	Intergenic	39772	NM_001322422	958	Hs.472860	NM_001250	ENSG00000101017	CD40	Bp50|CDW40|TNFRSF5|p50	CD40 molecule	protein-coding	16	3.4	4.705882353	2.25E-05
chr20-8531	chr20	44817406	44820815	+	48.6	3409	"intron (NM_021248, intron 8 of 11)"	"intron (NM_021248, intron 8 of 11)"	72217	NM_001322422	958	Hs.472860	NM_001250	ENSG00000101017	CD40	Bp50|CDW40|TNFRSF5|p50	CD40 molecule	protein-coding	48.65	9.71	5.010298661	3.28E-15
chr20-8535	chr20	44882791	44885940	+	57	3149	"intron (NM_021248, intron 1 of 11)"	"intron (NM_021248, intron 1 of 11)"	52772	NM_021248	64405	Hs.472861	NM_021248	ENSG00000149654	CDH22	C20orf25|dJ998H6.1	cadherin 22	protein-coding	56.97	10.19	5.59077527	7.03E-19
chr20-8542	chr20	45060822	45061822	+	14.7	1000	Intergenic	L1M6|LINE|L1	24960	NR_045983	100130934	Hs.712133	NM_173643		ZNF663P	ZNF663	"zinc finger protein 663, pseudogene"	pseudo	14.72	0.97	15.17525773	5.60E-10
chr20-855	chr20	45406196	45407466	+	26.2	1270	Intergenic	MER20|DNA|hAT-Charlie	68552	NM_030777	81031	Hs.305971	NM_030777	ENSG00000197496	SLC2A10	ATS|GLUT10	solute carrier family 2 member 10	protein-coding	26.24	6.31	4.158478605	2.77E-07
chr20-8553	chr20	45342476	45343476	+	15.4	1000	"intron (NM_030777, intron 1 of 4)"	MLT1K|LTR|ERVL-MaLR	4697	NM_030777	81031	Hs.305971	NM_030777	ENSG00000197496	SLC2A10	ATS|GLUT10	solute carrier family 2 member 10	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr20-8558	chr20	45467342	45468342	+	16	1000	Intergenic	AluJr|SINE|Alu	-55421	NM_005244	2139	Hs.472877	NM_005244	ENSG00000064655	EYA2	EAB1	EYA transcriptional coactivator and phosphatase 2	protein-coding	16	2.43	6.58436214	7.90E-07
chr20-8570	chr20	45716415	45717869	+	21.8	1454	"intron (NM_005244, intron 7 of 15)"	L2a|LINE|L2	-78467	NR_037410	100500814		NR_037410	ENSG00000264901	MIR3616	mir-3616	microRNA 3616	ncRNA	21.76	3.88	5.608247423	2.53E-08
chr20-8593	chr20	46411255	46417201	+	96	5946	"intron (NM_198596, intron 1 of 20)"	CpG	580	NM_018837	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding	96.01	20.39	4.708680726	8.84E-27
chr20-8594	chr20	46444959	46454549	+	149.8	9590	Intergenic	Intergenic	-34394	NM_198596	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding	149.78	30.09	4.977733466	5.25E-43
chr20-8596	chr20	46485528	46486528	+	15.4	1000	Intergenic	Intergenic	-70668	NM_198596	55959	Hs.162016	NM_018837	ENSG00000196562	SULF2	HSULF-2	sulfatase 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr20-8600	chr20	46732724	46733724	+	16	1000	Intergenic	MLT1J|LTR|ERVL-MaLR	-114363	NR_110027	101927457	Hs.445823	NR_110027		LINC01522	-	long intergenic non-protein coding RNA 1522	ncRNA	16	3.88	4.12371134	7.91E-05
chr20-8619	chr20	47083042	47084042	+	16	1000	Intergenic	Intergenic	94888	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	16	1.94	8.24742268	7.67E-08
chr20-8622	chr20	47163099	47164099	+	16	1000	Intergenic	MSTB1|LTR|ERVL-MaLR	174945	NR_026958	284749	Hs.299080	NR_026958	ENSG00000235621	LINC00494	-	long intergenic non-protein coding RNA 494	ncRNA	16	2.91	5.498281787	4.98E-06
chr20-8626	chr20	47259762	47260762	+	15.4	1000	"intron (NM_020820, intron 27 of 39)"	AluSz|SINE|Alu	184158	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-8634	chr20	47399431	47400431	+	15.4	1000	"intron (NM_020820, intron 1 of 39)"	L2a|LINE|L2	44489	NM_020820	57580	Hs.153310	NM_020820	ENSG00000124126	PREX1	P-REX1	"phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-8648	chr20	47967321	47968321	+	16	1000	Intergenic	L1PB1|LINE|L1	70601	NR_003030	692057		NR_003030	ENSG00000212304	SNORD12	HBII-99|MIR1259|MIRN1259	"small nucleolar RNA, C/D box 12"	snoRNA	16	3.88	4.12371134	7.91E-05
chr20-865	chr20	48172164	48173164	+	23	1000	"intron (NM_000961, intron 1 of 9)"	MER4-int|LTR|ERV1	12043	NM_000961	5740	Hs.302085	NM_000961	ENSG00000124212	PTGIS	CYP8|CYP8A1|PGIS|PTGI	prostaglandin I2 synthase	protein-coding	23.04	5.34	4.314606742	4.49E-07
chr20-8655	chr20	48065666	48066666	+	14.7	1000	"intron (NM_004975, intron 1 of 1)"	AluSz|SINE|Alu	33015	NM_004975	3745	Hs.84244	NM_004975	ENSG00000158445	KCNB1	DRK1|Kv2.1	potassium voltage-gated channel subfamily B member 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-8668	chr20	48355738	48357667	+	33.3	1929	Intergenic	AluJr|SINE|Alu	-26281	NM_004776	9334	Hs.370487	NM_004776	ENSG00000158470	B4GALT5	B4Gal-T5|BETA4-GALT-IV|beta4Gal-T5|beta4GalT-V|gt-V	"beta-1,4-galactosyltransferase 5"	protein-coding	33.28	5.82	5.718213058	4.04E-12
chr20-8670	chr20	48403951	48404951	+	14.7	1000	Intergenic	Intergenic	-24799	NR_048538	23315	Hs.444202	NM_015266	ENSG00000197818	SLC9A8	NHE-8|NHE8	solute carrier family 9 member A8	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-8676	chr20	48805239	48806495	+	21.1	1256	"intron (NR_125739, intron 4 of 6)"	"intron (NR_125739, intron 4 of 6)"	-1253	NM_001285878	1051	Hs.517106	NM_005194	ENSG00000172216	CEBPB	C/EBP-beta|IL6DBP|NF-IL6|TCF5	CCAAT/enhancer binding protein beta	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr20-8678	chr20	48850186	48851945	+	28.2	1759	Intergenic	MIR3|SINE|MIR	-32958	NM_001278655	100506115	Hs.235484	NM_001278655		LINC01272	-	long intergenic non-protein coding RNA 1272	protein-coding	28.16	6.31	4.462757528	1.42E-08
chr20-8691	chr20	49219237	49222952	+	53.1	3715	"intron (NR_110890, intron 12 of 21)"	"intron (NR_110890, intron 12 of 21)"	10228	NR_031634	100302146		NR_031634	ENSG00000221091	MIR1302-5	MIRN1302-5|hsa-mir-1302-5	microRNA 1302-5	ncRNA	53.13	13.11	4.052631579	3.69E-13
chr20-8700	chr20	49323161	49324426	+	17.9	1265	Intergenic	L2|LINE|L2	-15726	NM_001290268	140876	Hs.372578	NM_080829	ENSG00000042062	FAM65C	C20orf175|C20orf176	family with sequence similarity 65 member C	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-8702	chr20	49482997	49483997	+	14.1	1000	"intron (NM_198799, intron 4 of 4)"	"intron (NM_198799, intron 4 of 4)"	42831	NM_001282532	23394	Hs.293736	NM_015339	ENSG00000101126	ADNP	ADNP1|HVDAS|MRD28	activity dependent neuroprotector homeobox	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr20-8703	chr20	49583809	49584809	+	15.4	1000	Intergenic	Intergenic	8958	NM_014484	27304	Hs.159410	NM_014484	ENSG00000124217	MOCS3	UBA4	molybdenum cofactor synthesis 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-8714	chr20	49805930	49807249	+	20.5	1319	Intergenic	MER102a|DNA|hAT-Charlie	-166914	NM_002237	3755	Hs.118695	NM_002237	ENSG00000026559	KCNG1	K13|KCNG|KV6.1|kH2	potassium voltage-gated channel modifier subfamily G member 1	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr20-8724	chr20	49952697	49953697	+	14.1	1000	Intergenic	MIR|SINE|MIR	116317	NR_036162	100422889		NR_036162	ENSG00000266761	MIR3194	mir-3194	microRNA 3194	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr20-8725	chr20	49960172	49961827	+	20.5	1655	Intergenic	MLT1C|LTR|ERVL-MaLR	108515	NR_036162	100422889		NR_036162	ENSG00000266761	MIR3194	mir-3194	microRNA 3194	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr20-873	chr20	51830358	51833384	+	53.1	3026	"intron (NM_001193421, intron 1 of 2)"	"intron (NM_001193421, intron 1 of 2)"	30049	NM_001193421	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	53.13	11.65	4.560515021	8.89E-15
chr20-8748	chr20	51278152	51279152	+	16	1000	Intergenic	MLT1A0|LTR|ERVL-MaLR	41275	NR_110038	101927700	Hs.434465	NR_110038	ENSG00000234948	LINC01524	-	long intergenic non-protein coding RNA 1524	ncRNA	16	1.46	10.95890411	3.44E-09
chr20-875	chr20	55382986	55384501	+	28.2	1515	Intergenic	Intergenic	179385	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	28.16	6.31	4.462757528	1.42E-08
chr20-8752	chr20	51556216	51557216	+	14.7	1000	Intergenic	MLT1I|LTR|ERVL-MaLR	-32230	NM_173485	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr20-8759	chr20	51772282	51773282	+	15.4	1000	"intron (NM_173485, intron 1 of 2)"	Charlie8|DNA|hAT-Charlie	-29040	NM_001193421	128553	Hs.473117	NM_173485	ENSG00000182463	TSHZ2	C20orf17|OVC10-2|TSH2|ZABC2|ZNF218	teashirt zinc finger homeobox 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-8776	chr20	52573259	52574259	+	16	1000	"intron (NM_001316361, intron 8 of 9)"	"intron (NM_001316361, intron 8 of 9)"	-81511	NR_002189	391257	Hs.449977	NR_002189		SUMO1P1	PIC1L|UBL2|UBL6	SUMO1 pseudogene 1	pseudo	16	2.91	5.498281787	4.98E-06
chr20-8777	chr20	52579202	52580202	+	15.4	1000	"intron (NM_003657, intron 9 of 11)"	"intron (NM_003657, intron 9 of 11)"	-87454	NR_002189	391257	Hs.449977	NR_002189		SUMO1P1	PIC1L|UBL2|UBL6	SUMO1 pseudogene 1	pseudo	15.36	3.4	4.517647059	2.25E-05
chr20-8800	chr20	53112528	53113528	+	16	1000	"intron (NM_018431, intron 1 of 7)"	AluY|SINE|Alu	20771	NM_177959	55816	Hs.473133	NM_018431	ENSG00000101134	DOK5	C20orf180|IRS-6|IRS6	docking protein 5	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-8810	chr20	54220278	54221278	+	15.4	1000	Intergenic	Intergenic	-177043	NR_110064	101927796	Hs.737040	NR_110064	ENSG00000224008	LINC01441	-	long intergenic non-protein coding RNA 1441	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr20-8818	chr20	54926368	54927368	+	15.4	1000	Intergenic	MLT1F2|LTR|ERVL-MaLR	-7115	NM_080821	116151	Hs.143736	NM_080821	ENSG00000124098	FAM210B	5A3|C20orf108|dJ1167H4.1	family with sequence similarity 210 member B	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr20-8822	chr20	55115435	55116435	+	16	1000	Intergenic	MLT1E1A|LTR|ERVL-MaLR	7633	NM_001013646	388799	Hs.287759	NM_001013646	ENSG00000213714	FAM209B	C20orf107|dJ1153D9.4	family with sequence similarity 209 member B	protein-coding	16	0.97	16.49484536	3.54E-11
chr20-8823	chr20	55139214	55140214	+	16	1000	Intergenic	AluSq2|SINE|Alu	-12905	NR_136537	105372682	Hs.517135	NR_136537	ENSG00000225657	LINC01716	-	long intergenic non-protein coding RNA 1716	ncRNA	16	0.97	16.49484536	3.54E-11
chr20-8833	chr20	55313210	55314210	+	15.4	1000	Intergenic	AluSz|SINE|Alu	109352	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr20-8835	chr20	55317587	55318587	+	15.4	1000	Intergenic	MIRb|SINE|MIR	113729	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-8844	chr20	55398442	55399442	+	15.4	1000	Intergenic	L1MC3|LINE|L1	194584	NM_003222	7022	Hs.473152	NM_003222	ENSG00000087510	TFAP2C	AP2-GAMMA|ERF1|TFAP2G|hAP-2g	transcription factor AP-2 gamma	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr20-8854	chr20	55610958	55611958	+	16	1000	Intergenic	L2b|LINE|L2	-177294	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	16	3.88	4.12371134	7.91E-05
chr20-8860	chr20	55683335	55684798	+	22.4	1463	Intergenic	Intergenic	-104686	NR_110631	102723590	Hs.667674	NR_110631		BMP7-AS1	-	BMP7 antisense RNA 1	ncRNA	22.4	3.4	6.588235294	3.73E-09
chr20-8864	chr20	55829589	55830589	+	16	1000	"intron (NM_001719, intron 1 of 6)"	"intron (NM_001719, intron 1 of 6)"	11618	NM_001719	655	Hs.473163	NM_001719	ENSG00000101144	BMP7	OP-1	bone morphogenetic protein 7	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-8866	chr20	55834284	55840177	+	108.8	5893	"intron (NM_001719, intron 1 of 6)"	"intron (NM_001719, intron 1 of 6)"	4477	NM_001719	655	Hs.473163	NM_001719	ENSG00000101144	BMP7	OP-1	bone morphogenetic protein 7	protein-coding	108.81	19.9	5.467839196	1.48E-34
chr20-8868	chr20	55842305	55847724	+	94.7	5419	Intergenic	MIR|SINE|MIR	-3307	NM_001719	655	Hs.473163	NM_001719	ENSG00000101144	BMP7	OP-1	bone morphogenetic protein 7	protein-coding	94.73	21.84	4.337454212	2.25E-24
chr20-8876	chr20	56004593	56005593	+	15.4	1000	Intergenic	Intergenic	38639	NM_001291780	55544	Hs.236361	NM_017495	ENSG00000132819	RBM38	HSRNASEB|RNPC1|SEB4B|SEB4D|dJ800J21.2	RNA binding motif protein 38	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr20-888	chr20	56292381	56294560	+	47.4	2179	Intergenic	L1ME4a|LINE|L1	-6878	NM_199171	56937	Hs.517155	NM_020182	ENSG00000124225	PMEPA1	STAG1|TMEPAI	"prostate transmembrane protein, androgen induced 1"	protein-coding	47.37	8.74	5.419908467	6.98E-16
chr20-8886	chr20	56151977	56155295	+	59.5	3318	Intergenic	Intergenic	17499	NM_002591	5105	Hs.1872	NM_002591	ENSG00000124253	PCK1	PEPCK-C|PEPCK1|PEPCKC	phosphoenolpyruvate carboxykinase 1	protein-coding	59.53	3.88	15.34278351	1.38E-37
chr20-8906	chr20	56316857	56318525	+	28.2	1668	Intergenic	MIR|SINE|MIR	-31099	NM_199171	56937	Hs.517155	NM_020182	ENSG00000124225	PMEPA1	STAG1|TMEPAI	"prostate transmembrane protein, androgen induced 1"	protein-coding	28.16	4.37	6.443935927	1.84E-11
chr20-8925	chr20	56521624	56522624	+	14.7	1000	Intergenic	Intergenic	51674	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr20-8926	chr20	56538548	56540680	+	36.5	2132	Intergenic	Intergenic	69164	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	36.48	7.77	4.694980695	8.02E-11
chr20-8927	chr20	56551159	56552159	+	16	1000	Intergenic	MER113|DNA|hAT-Charlie	81209	NR_039757	100616353		NR_039757	ENSG00000263453	MIR4532	mir-4532	microRNA 4532	ncRNA	16	3.4	4.705882353	2.25E-05
chr20-8938	chr20	56718878	56720658	+	30.1	1780	Intergenic	Intergenic	-6215	NM_178456	128602	Hs.43977	NM_178456	ENSG00000124237	C20orf85	LLC1|bA196N14.1	chromosome 20 open reading frame 85	protein-coding	30.08	4.85	6.202061856	2.13E-11
chr20-894	chr20	56775795	56779271	+	62.7	3476	Intergenic	AluSq2|SINE|Alu	26176	NM_001304369	140731	Hs.266571	NM_080674	ENSG00000124227	ANKRD60	C20orf86|bA196N14.3	ankyrin repeat domain 60	protein-coding	62.73	12.13	5.17147568	1.13E-19
chr20-8940	chr20	56723311	56724311	+	15.4	1000	Intergenic	L2c|LINE|L2	-2172	NM_178456	128602	Hs.43977	NM_178456	ENSG00000124237	C20orf85	LLC1|bA196N14.1	chromosome 20 open reading frame 85	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr20-8952	chr20	57090432	57091432	+	15.4	1000	promoter-TSS (NR_130908)	promoter-TSS (NR_130908)	497	NR_034147	149773	Hs.685214	NR_034147	ENSG00000231290	APCDD1L-AS1	-	APCDD1L antisense RNA 1 (head to head)	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr20-8978	chr20	57414493	57415493	+	16	1000	"5' UTR (NM_016592, exon 1 of 13)"	"5' UTR (NM_016592, exon 1 of 13)"	220	NM_016592	2778	Hs.125898	NM_000516	ENSG00000087460	GNAS	AHO|C20orf45|GNAS1|GPSA|GSA|GSP|NESP|POH|SCG6|SgVI	GNAS complex locus	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-899	chr20	57326703	57328874	+	42.2	2171	Intergenic	Intergenic	-20693	NR_134566	105372695	Hs.128204	NR_134566		LOC105372695	-	uncharacterized LOC105372695	ncRNA	42.25	3.88	10.88917526	4.87E-23
chr20-9010	chr20	58095568	58096568	+	15.4	1000	Intergenic	L1MA9|LINE|L1	-56496	NM_001199505	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr20-9015	chr20	58153324	58159251	+	91.5	5927	"intron (NM_001199505, intron 1 of 12)"	"intron (NM_001199505, intron 1 of 12)"	3723	NM_001199505	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	91.53	22.33	4.098969996	5.85E-22
chr20-9018	chr20	58166212	58169819	+	71.7	3607	"intron (NM_001199505, intron 1 of 12)"	L1MC1|LINE|L1	-11587	NM_080672	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	71.69	12.62	5.68066561	3.99E-24
chr20-9021	chr20	58243340	58249770	+	96.7	6430	"intron (NM_001281507, intron 1 of 12)"	MER102b|DNA|hAT-Charlie	-5161	NM_001199506	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	96.65	23.78	4.064339781	6.82E-23
chr20-903	chr20	57580695	57583391	+	57.6	2696	"exon (NM_001336, exon 1 of 6)"	"exon (NM_001336, exon 1 of 6)"	266	NM_001336	1522	Hs.252549	NM_001336	ENSG00000101160	CTSZ	CTSX	cathepsin Z	protein-coding	57.61	5.82	9.89862543	3.99E-29
chr20-9031	chr20	58321357	58325365	+	65.3	4008	"intron (NM_001199505, intron 3 of 12)"	MIRc|SINE|MIR	27096	NM_183244	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	65.29	15.53	4.204121056	8.65E-17
chr20-9038	chr20	58391714	58392714	+	15.4	1000	"intron (NM_001199505, intron 8 of 12)"	"intron (NM_001199505, intron 8 of 12)"	95949	NM_183244	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr20-9039	chr20	58401190	58405626	+	70.4	4436	"intron (NM_001199505, intron 8 of 12)"	MER20B|DNA|hAT-Charlie	105310	NM_014258	10388	Hs.202676	NM_014258	ENSG00000196074	SYCP2	SCP-2|SCP2	synaptonemal complex protein 2	protein-coding	70.41	13.59	5.181015453	6.39E-22
chr20-904	chr20	57800138	57801138	+	23.7	1000	"intron (NM_178457, intron 3 of 4)"	"intron (NM_178457, intron 3 of 4)"	34563	NM_178457	128611	Hs.473204	NM_178457	ENSG00000124203	ZNF831	C20orf174|dJ492J12.1	zinc finger protein 831	protein-coding	23.68	5.82	4.068728522	1.51E-06
chr20-9047	chr20	58613673	58615303	+	25.6	1630	Intergenic	Intergenic	-16492	NM_001302815	284756	Hs.335319	NM_173644		C20orf197	-	chromosome 20 open reading frame 197	protein-coding	25.6	4.85	5.278350515	4.26E-09
chr20-906	chr20	58034971	58036224	+	25.6	1253	Intergenic	Intergenic	-116967	NM_001199505	116154	Hs.473218	NM_080672	ENSG00000087495	PHACTR3	C20orf101|H17739|PPP1R123|SCAPIN1|SCAPININ	phosphatase and actin regulator 3	protein-coding	25.6	2.43	10.53497942	2.44E-14
chr20-9072	chr20	59419141	59420141	+	16	1000	Intergenic	Intergenic	-234479	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	16	1.94	8.24742268	7.67E-08
chr20-9074	chr20	59435475	59436475	+	15.4	1000	Intergenic	Intergenic	-218145	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr20-9079	chr20	59560981	59562523	+	21.1	1542	Intergenic	Intergenic	-92368	NR_109919	100506470	Hs.125674	NR_109919	ENSG00000229606	LINC01718	-	long intergenic non-protein coding RNA 1718	ncRNA	21.12	4.85	4.354639175	2.52E-06
chr20-9103	chr20	60657222	60658222	+	14.1	1000	Intergenic	THE1D|LTR|ERVL-MaLR	-16856	NM_003185	6874	Hs.18857	NM_003185	ENSG00000130699	TAF4	TAF2C|TAF2C1|TAF4A|TAFII130|TAFII135	TATA-box binding protein associated factor 4	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr20-9104	chr20	60667202	60668561	+	26.9	1359	Intergenic	MLT1A0-int|LTR|ERVL-MaLR	-27015	NM_003185	6874	Hs.18857	NM_003185	ENSG00000130699	TAF4	TAF2C|TAF2C1|TAF4A|TAFII130|TAFII135	TATA-box binding protein associated factor 4	protein-coding	26.88	6.31	4.259904913	6.42E-08
chr20-9105	chr20	60784342	60785342	+	15.4	1000	Intergenic	Intergenic	10481	NM_007232	11255	Hs.251399	NM_007232	ENSG00000101180	HRH3	GPCR97|HH3R	histamine receptor H3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-9111	chr20	60929812	60932926	+	53.8	3114	"non-coding (NR_109924, exon 3 of 3)"	"non-coding (NR_109924, exon 3 of 3)"	3303	NR_109924	101928158	Hs.473256	NR_109922	ENSG00000228812	LAMA5-AS1	-	LAMA5 antisense RNA 1	ncRNA	53.77	5.82	9.238831615	3.64E-26
chr20-9134	chr20	61353656	61354656	+	16	1000	"intron (NM_002531, intron 1 of 3)"	L1MEc|LINE|L1	13967	NM_002531	4923	Hs.590869	NM_002531	ENSG00000101188	NTSR1	NTR	neurotensin receptor 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr20-9137	chr20	61587300	61588300	+	14.1	1000	"intron (NM_001302643, intron 2 of 13)"	"intron (NM_001302643, intron 2 of 13)"	3801	NM_001302643	63910	Hs.512686	NM_022082	ENSG00000101194	SLC17A9	C20orf59|POROK8|VNUT	solute carrier family 17 member 9	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr20-9140	chr20	61682484	61683484	+	15.4	1000	"non-coding (NR_033369, exon 4 of 6)"	"non-coding (NR_033369, exon 4 of 6)"	13621	NR_033369	100144597	Hs.636485	NR_033369	ENSG00000237119	LINC01056	-	long intergenic non-protein coding RNA 1056	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr20-9145	chr20	61722884	61724648	+	32.6	1764	Intergenic	Intergenic	-8878	NR_003244	768096	Hs.549606	NR_003244		HAR1A	HAR1F|LINC00064|NCRNA00064	highly accelerated region 1A (non-protein coding)	ncRNA	32.64	6.31	5.17274168	1.20E-10
chr20-9150	chr20	61855980	61856980	+	16	1000	Intergenic	MER4C|LTR|ERV1	-8942	NM_017798	54915	Hs.744852	NM_017798	ENSG00000149658	YTHDF1	C20orf21	YTH N6-methyladenosine RNA binding protein 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr20-9152	chr20	61968987	61969987	+	16	1000	Intergenic	Intergenic	-21853	NR_110634	100130587	Hs.640129	NR_110634	ENSG00000203900	LOC100130587	-	uncharacterized LOC100130587	ncRNA	16	3.88	4.12371134	7.91E-05
chr20-9154	chr20	62002131	62006586	+	81.3	4455	Intergenic	L2b|LINE|L2	-11610	NM_001256573	1137	Hs.10734	NM_000744	ENSG00000101204	CHRNA4	BFNC|EBN|EBN1|NACHR|NACHRA4|NACRA4	cholinergic receptor nicotinic alpha 4 subunit	protein-coding	81.29	9.22	8.81670282	4.50E-37
chr20-9169	chr20	81595	82595	+	14.7	1000	Intergenic	AluY|SINE|Alu	13782	NM_153325	245938	Hs.380220	NM_153325	ENSG00000178591	DEFB125	DEFB-25	defensin beta 125	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-9181	chr20	600345	601345	+	14.1	1000	Intergenic	Intergenic	-9935	NM_004609	6939	Hs.437	NM_004609	ENSG00000125878	TCF15	EC2|PARAXIS|bHLHa40	transcription factor 15 (basic helix-loop-helix)	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr20-9182	chr20	607917	608917	+	15.4	1000	Intergenic	MLT1F1|LTR|ERVL-MaLR	-17507	NM_004609	6939	Hs.437	NM_004609	ENSG00000125878	TCF15	EC2|PARAXIS|bHLHa40	transcription factor 15 (basic helix-loop-helix)	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr20-9189	chr20	682332	683332	+	14.1	1000	Intergenic	MIRb|SINE|MIR	-26009	NM_033129	85508	Hs.355284	NM_033129	ENSG00000215397	SCRT2	ZNF898B	scratch family transcriptional repressor 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr20-9191	chr20	699078	704841	+	99.2	5763	Intergenic	Intergenic	-45136	NM_033129	85508	Hs.355284	NM_033129	ENSG00000215397	SCRT2	ZNF898B	scratch family transcriptional repressor 2	protein-coding	99.21	20.39	4.865620402	3.80E-28
chr20-9194	chr20	731215	732215	+	14.1	1000	Intergenic	MLT1H|LTR|ERVL-MaLR	17513	NM_033409	113278	Hs.283865	NM_033409	ENSG00000101276	SLC52A3	BVVLS|BVVLS1|C20orf54|RFT2|RFVT3|bA371L19.1|hRFT2	solute carrier family 52 member 3	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr20-9203	chr20	852608	853608	+	14.7	1000	"3' UTR (NM_001322809, exon 8 of 8)"	"3' UTR (NM_001322809, exon 8 of 8)"	27857	NM_031424	83541	Hs.574822	NM_031424	ENSG00000125898	FAM110A	C20orf55|F10|bA371L19.3	family with sequence similarity 110 member A	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-9205	chr20	925128	926404	+	17.9	1276	Intergenic	Intergenic	-28789	NM_001322809	51378	Hs.278973	NM_015985	ENSG00000101280	ANGPT4	ANG3|ANG4	angiopoietin 4	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr20-9209	chr20	967906	970626	+	42.2	2720	"intron (NM_001040007, intron 1 of 3)"	AluSx1|SINE|Alu	13641	NM_001040007	343637	Hs.444980	NM_001029871	ENSG00000101282	RSPO4	C20orf182|CRISTIN4	R-spondin 4	protein-coding	42.25	7.28	5.803571429	3.82E-15
chr20-9226	chr20	1477195	1478195	+	14.7	1000	Intergenic	L1M1|LINE|L1	-5462	NM_001122962	284759	Hs.721685	NM_001122962	ENSG00000196209	SIRPB2	PTPN1L|PTPNS1L3|dJ776F14.2	signal regulatory protein beta 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-9238	chr20	1769040	1770469	+	23.7	1429	Intergenic	MIRb|SINE|MIR	-9362	NR_037142	100289473	Hs.641525	NR_037142	ENSG00000232528	LOC100289473	-	cytoskeleton associated protein 2-like pseudogene	pseudo	23.68	5.34	4.434456929	4.49E-07
chr20-9240	chr20	1807417	1808417	+	15.4	1000	Intergenic	Intergenic	-47525	NR_037142	100289473	Hs.641525	NR_037142	ENSG00000232528	LOC100289473	-	cytoskeleton associated protein 2-like pseudogene	pseudo	15.36	2.91	5.278350515	4.98E-06
chr20-9243	chr20	1820554	1822475	+	27.5	1921	Intergenic	L2a|LINE|L2	-53299	NM_001330728	140885	Hs.581021	NM_080792	ENSG00000198053	SIRPA	BIT|CD172A|MFR|MYD-1|P84|PTPNS1|SHPS1|SIRP	signal regulatory protein alpha	protein-coding	27.52	4.37	6.297482838	1.19E-10
chr20-9247	chr20	1855389	1856389	+	15.4	1000	Intergenic	Intergenic	-18924	NM_001330728	140885	Hs.581021	NM_080792	ENSG00000198053	SIRPA	BIT|CD172A|MFR|MYD-1|P84|PTPNS1|SHPS1|SIRP	signal regulatory protein alpha	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr20-9250	chr20	1868813	1881189	+	183.1	12376	promoter-TSS (NM_080792)	promoter-TSS (NM_080792)	188	NM_001040022	140885	Hs.581021	NM_080792	ENSG00000198053	SIRPA	BIT|CD172A|MFR|MYD-1|P84|PTPNS1|SHPS1|SIRP	signal regulatory protein alpha	protein-coding	183.06	30.09	6.083748754	2.32E-62
chr20-9270	chr20	2151743	2152743	+	14.7	1000	Intergenic	L2b|LINE|L2	-35331	NM_001287682	388780	Hs.132163	NM_001287682		LOC388780	-	uncharacterized LOC388780	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr20-9277	chr20	2206593	2207593	+	17.3	1000	Intergenic	Intergenic	19519	NM_001287682	388780	Hs.132163	NM_001287682		LOC388780	-	uncharacterized LOC388780	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr20-9281	chr20	2236425	2237425	+	12.8	1000	Intergenic	Intergenic	-39688	NM_003245	7053	Hs.2022	NM_003245	ENSG00000125780	TGM3	TGE	transglutaminase 3	protein-coding	12.8	1.94	6.597938144	4.51E-06
chr20-9292	chr20	2347610	2348610	+	14.7	1000	Intergenic	L1MB5|LINE|L1	-13444	NM_198994	343641	Hs.452039	NM_198994	ENSG00000166948	TGM6	SCA35|TG6|TGM3L|TGY|dJ734P14.3	transglutaminase 6	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr20-9304	chr20	2595570	2596570	+	17.3	1000	"intron (NM_080751, intron 14 of 19)"	"intron (NM_080751, intron 14 of 19)"	-37108	NM_006392	10528	Hs.376064	NM_006392	ENSG00000101361	NOP56	NOL5A|SCA36	NOP56 ribonucleoprotein	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr20-932	chr20	61898810	61900137	+	25	1327	Intergenic	Intergenic	-4664	NM_175609	55738	Hs.25584	NM_018209	ENSG00000101199	ARFGAP1	ARF1GAP|HRIHFB2281	ADP ribosylation factor GTPase activating protein 1	protein-coding	24.96	4.37	5.711670481	4.38E-09
chr20-9324	chr20	3061080	3064862	+	73.6	3782	TTS (NM_000490)	TTS (NM_000490)	2399	NM_000490	551	Hs.89648	NM_000490	ENSG00000101200	AVP	ADH|ARVP|AVP-NPII|AVRP|VP	arginine vasopressin	protein-coding	73.61	8.74	8.422196796	1.06E-32
chr20-9328	chr20	3411382	3414724	+	68.5	3342	Intergenic	Intergenic	-24744	NM_001009984	25943	Hs.516853	NM_001009984	ENSG00000088854	C20orf194	-	chromosome 20 open reading frame 194	protein-coding	68.49	11.65	5.878969957	2.12E-23
chr20-9331	chr20	3661349	3665954	+	67.8	4605	promoter-TSS (NM_001282447)	promoter-TSS (NM_001282447)	-314	NM_153202	80332	Hs.173716	NM_025220	ENSG00000149451	ADAM33	C20orf153|DJ964F7.1	ADAM metallopeptidase domain 33	protein-coding	67.85	13.59	4.992641648	1.70E-20
chr20-9347	chr20	4414459	4415459	+	14.1	1000	Intergenic	Intergenic	-185300	NM_000678	146	Hs.557	NM_000678	ENSG00000171873	ADRA1D	ADRA1|ADRA1A|ADRA1R|ALPHA1|DAR|dJ779E11.2	adrenoceptor alpha 1D	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr20-9361	chr20	4568974	4569974	+	14.7	1000	Intergenic	AluY|SINE|Alu	-97323	NM_001080121	5621	Hs.472010	NM_000311	ENSG00000171867	PRNP	ASCR|AltPrP|CD230|CJD|GSS|KURU|PRIP|PrP|PrP27-30|PrP33-35C|PrPc|p27-30	prion protein	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr20-9366	chr20	4727363	4729238	+	28.2	1875	Intergenic	MLT1C|LTR|ERVL-MaLR	-6986	NR_024267	149830	Hs.126516	NM_177549	ENSG00000180259	PRNT	M8	prion protein (testis specific)	ncRNA	28.16	6.8	4.141176471	5.07E-08
chr20-9369	chr20	5020177	5021177	+	16.6	1000	Intergenic	L1ME3C|LINE|L1	-29738	NM_203327	9962	Hs.516866	NM_005116	ENSG00000089057	SLC23A2	NBTL1|SLC23A1|SVCT2|YSPL2|hSVCT2	solute carrier family 23 member 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr20-9382	chr20	5598824	5599824	+	14.1	1000	Intergenic	AluSz6|SINE|Alu	-7652	NM_019593	56261	Hs.636359	NM_019593	ENSG00000125772	GPCPD1	EDI3|GDE5|GDPD6|PREI4	glycerophosphocholine phosphodiesterase 1	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr20-9394	chr20	6160281	6161281	+	14.1	1000	Intergenic	Intergenic	-56590	NM_017671	55612	Hs.472054	NM_017671	ENSG00000101311	FERMT1	C20orf42|DTGCU2|KIND1|UNC112A|URP1	fermitin family member 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr20-9395	chr20	6166401	6167401	+	14.7	1000	Intergenic	Intergenic	-62710	NM_017671	55612	Hs.472054	NM_017671	ENSG00000101311	FERMT1	C20orf42|DTGCU2|KIND1|UNC112A|URP1	fermitin family member 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-9406	chr20	6480232	6481232	+	13.4	1000	"intron (NR_109953, intron 3 of 3)"	MER34C2|LTR|ERV1	73353	NR_109953	101929244	Hs.542488	NR_109953	ENSG00000229876	CASC20	-	cancer susceptibility candidate 20 (non-protein coding)	ncRNA	13.44	1.46	9.205479452	3.57E-07
chr20-941	chr20	581543	582824	+	25.6	1281	Intergenic	AluSx|SINE|Alu	8727	NM_004609	6939	Hs.437	NM_004609	ENSG00000125878	TCF15	EC2|PARAXIS|bHLHa40	transcription factor 15 (basic helix-loop-helix)	protein-coding	25.6	6.31	4.057052298	2.77E-07
chr20-942	chr20	629110	630110	+	22.4	1000	"intron (NM_080725, intron 1 of 1)"	"intron (NM_080725, intron 1 of 1)"	4404	NM_080725	140809	Hs.516830	NM_080725	ENSG00000271303	SRXN1	C20orf139|Npn3|SRX|SRX1	sulfiredoxin 1	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr20-9420	chr20	7177240	7178240	+	15.4	1000	"intron (NR_110609, intron 3 of 7)"	L1MB1|LINE|L1	57109	NR_110609	101929265	Hs.637730	NR_110609	ENSG00000228888	LINC01428	-	long intergenic non-protein coding RNA 1428	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr20-9432	chr20	7791212	7792212	+	15.4	1000	Intergenic	L1PA7|LINE|L1	129381	NM_017545	54363	Hs.193640	NM_017545	ENSG00000101323	HAO1	GOX|GOX1|HAOX1	hydroxyacid oxidase 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-9448	chr20	9243567	9244567	+	14.7	1000	"intron (NM_001172646, intron 2 of 37)"	MER5A1|DNA|hAT-Charlie	-44380	NM_000933	5332	Hs.472101	NM_000933	ENSG00000101333	PLCB4	ARCND2|PI-PLC	phospholipase C beta 4	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-9449	chr20	9328882	9329882	+	14.7	1000	"intron (NM_000933, intron 4 of 35)"	"intron (NM_000933, intron 4 of 35)"	40935	NM_000933	5332	Hs.472101	NM_000933	ENSG00000101333	PLCB4	ARCND2|PI-PLC	phospholipase C beta 4	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr20-9456	chr20	9829843	9830843	+	14.1	1000	Intergenic	L1MD2|LINE|L1	-10656	NM_020341	57144	Hs.32539	NM_020341	ENSG00000101349	PAK5	PAK7	p21 (RAC1) activated kinase 5	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr20-9464	chr20	10173485	10174485	+	15.4	1000	"intron (NR_040710, intron 2 of 4)"	L2a|LINE|L2	-25461	NM_003081	6616	Hs.167317	NM_003081	ENSG00000132639	SNAP25	CMS18|RIC-4|RIC4|SEC9|SNAP|SNAP-25|SUP|bA416N4.2|dJ1068F16.2	synaptosome associated protein 25	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-9471	chr20	10346543	10347818	+	22.4	1275	Intergenic	AluJb|SINE|Alu	65393	NM_018848	8195	Hs.472119	NM_018848	ENSG00000125863	MKKS	BBS6|HMCS|KMS|MKS	McKusick-Kaufman syndrome	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr20-9475	chr20	10658153	10659153	+	14.7	1000	Intergenic	L1ME2z|LINE|L1	-3959	NM_000214	182	Hs.224012	NM_000214	ENSG00000101384	JAG1	AGS|AGS1|AHD|AWS|CD339|HJ1|JAGL1	jagged 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr20-949	chr20	1516440	1517440	+	22.4	1000	"intron (NM_178460, intron 3 of 3)"	MIR|SINE|MIR	21403	NM_178460	128646	Hs.729560	NM_178460	ENSG00000125900	SIRPD	PTPNS1L2|dJ576H24.4	signal regulatory protein delta	protein-coding	22.4	5.34	4.194756554	1.97E-06
chr20-9517	chr20	13226233	13227233	+	14.1	1000	"intron (NM_080826, intron 1 of 5)"	AluSz|SINE|Alu	-6399	NR_040043	100505536	Hs.665253	NR_040043		ISM1-AS1	-	ISM1 antisense RNA 1	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr20-9525	chr20	13889864	13890864	+	14.7	1000	"intron (NR_073207, intron 5 of 18)"	AluSx|SINE|Alu	80901	NR_073206	80343	Hs.590879	NM_025229	ENSG00000101251	SEL1L2	C20orf50	SEL1L2 ERAD E3 ligase adaptor subunit	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr20-9533	chr20	15611474	15612474	+	14.7	1000	"intron (NM_080676, intron 8 of 16)"	"intron (NM_080676, intron 8 of 16)"	291985	NR_130925	613266	Hs.309149	NR_130924		LOC613266	-	uncharacterized LOC613266	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr20-9534	chr20	15691888	15693189	+	22.4	1301	"intron (NM_080676, intron 8 of 16)"	"intron (NM_080676, intron 8 of 16)"	211421	NR_130925	613266	Hs.309149	NR_130924		LOC613266	-	uncharacterized LOC613266	ncRNA	22.4	3.4	6.588235294	3.73E-09
chr20-9540	chr20	16106102	16107102	+	14.1	1000	Intergenic	AluJr|SINE|Alu	-140075	NR_130924	613266	Hs.309149	NR_130924		LOC613266	-	uncharacterized LOC613266	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr20-9542	chr20	16525243	16526243	+	14.7	1000	"intron (NM_001199865, intron 1 of 24)"	"intron (NM_001199865, intron 1 of 24)"	28336	NM_024704	55614	Hs.101774	NM_024704	ENSG00000089177	KIF16B	C20orf23|KISC20ORF|SNX23	kinesin family member 16B	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-9543	chr20	16569410	16570410	+	14.7	1000	Intergenic	AluJr|SINE|Alu	-15831	NM_001199866	55614	Hs.101774	NM_024704	ENSG00000089177	KIF16B	C20orf23|KISC20ORF|SNX23	kinesin family member 16B	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-9544	chr20	16690817	16692397	+	26.9	1580	Intergenic	Intergenic	-19002	NM_003092	6629	Hs.280378	NM_003092	ENSG00000125870	SNRPB2	Msl1|U2B''	small nuclear ribonucleoprotein polypeptide B2	protein-coding	26.88	5.82	4.618556701	1.71E-08
chr20-9548	chr20	16747459	16748459	+	15.4	1000	Intergenic	Intergenic	18961	NM_020157	56914	Hs.41119	NM_020157	ENSG00000125879	OTOR	FDP|MIAL1	otoraplin	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-9549	chr20	16779607	16780607	+	14.7	1000	Intergenic	Intergenic	51109	NM_020157	56914	Hs.41119	NM_020157	ENSG00000125879	OTOR	FDP|MIAL1	otoraplin	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr20-9558	chr20	17400076	17401076	+	14.7	1000	"intron (NM_002594, intron 6 of 11)"	"intron (NM_002594, intron 6 of 11)"	111438	NM_001195	631	Hs.129702	NM_001195	ENSG00000125864	BFSP1	CP115|CP94|CTRCT33|LIFL-H	beaded filament structural protein 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-9559	chr20	17418958	17420658	+	26.9	1700	"intron (NM_002594, intron 8 of 11)"	AluJb|SINE|Alu	92206	NM_001195	631	Hs.129702	NM_001195	ENSG00000125864	BFSP1	CP115|CP94|CTRCT33|LIFL-H	beaded filament structural protein 1	protein-coding	26.88	2.43	11.0617284	2.19E-15
chr20-9562	chr20	17477689	17478689	+	14.7	1000	"intron (NM_001278608, intron 8 of 9)"	(TA)n|Simple_repeat|Simple_repeat	33825	NM_001195	631	Hs.129702	NM_001195	ENSG00000125864	BFSP1	CP115|CP94|CTRCT33|LIFL-H	beaded filament structural protein 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr20-9570	chr20	17670134	17671498	+	19.8	1364	Intergenic	MIRb|SINE|MIR	-3504	NM_001159495	140836	Hs.115366	NM_178477	ENSG00000125888	BANF2	BAF-L|BAF2|BAFL|C20orf179	barrier to autointegration factor 2	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr20-9574	chr20	17690832	17694601	+	74.9	3769	"intron (NM_001014977, intron 1 of 2)"	LTR81B|LTR|Gypsy	12123	NM_001014977	140836	Hs.115366	NM_178477	ENSG00000125888	BANF2	BAF-L|BAF2|BAFL|C20orf179	barrier to autointegration factor 2	protein-coding	74.89	12.13	6.173948887	1.74E-26
chr20-9583	chr20	17800202	17801202	+	14.7	1000	Intergenic	MLT1H1|LTR|ERVL-MaLR	120109	NM_001014977	140836	Hs.115366	NM_178477	ENSG00000125888	BANF2	BAF-L|BAF2|BAFL|C20orf179	barrier to autointegration factor 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-9592	chr20	18009874	18016069	+	79.4	6195	"intron (NM_001303462, intron 2 of 2)"	GA-rich|Low_complexity|Low_complexity	25555	NM_021220	58495	Hs.661013	NM_021220	ENSG00000125850	OVOL2	EUROIMAGE566589|PPCD1|ZNF339	ovo like zinc finger 2	protein-coding	79.37	15.05	5.273754153	6.89E-25
chr20-9604	chr20	18634186	18635186	+	17.9	1000	"intron (NM_080820, intron 4 of 5)"	"intron (NM_080820, intron 4 of 5)"	44666	NR_109955	101929526	Hs.639402	NR_109955	ENSG00000233993	LOC101929526	-	uncharacterized LOC101929526	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr20-961	chr20	2521282	2522282	+	21.8	1000	"intron (NM_080751, intron 2 of 19)"	L2b|LINE|L2	4529	NM_080751	117532	Hs.352626	NM_080751	ENSG00000149488	TMC2	C20orf145	transmembrane channel like 2	protein-coding	21.76	1.46	14.90410959	8.59E-15
chr20-9616	chr20	19730468	19731468	+	15.4	1000	Intergenic	AluJb|SINE|Alu	-136197	NM_001242581	54453	Hs.472270	NM_018993	ENSG00000132669	RIN2	MACS|RASSF4	Ras and Rab interactor 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr20-9617	chr20	19745365	19746365	+	15.4	1000	Intergenic	Intergenic	-121300	NM_001242581	54453	Hs.472270	NM_018993	ENSG00000132669	RIN2	MACS|RASSF4	Ras and Rab interactor 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr20-9618	chr20	19751393	19752833	+	25.6	1440	Intergenic	Intergenic	-115052	NM_001242581	54453	Hs.472270	NM_018993	ENSG00000132669	RIN2	MACS|RASSF4	Ras and Rab interactor 2	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr20-9623	chr20	19946101	19947101	+	13.4	1000	"intron (NM_001242581, intron 6 of 11)"	"intron (NM_001242581, intron 6 of 11)"	-51333	NM_181528	51126	Hs.368783	NM_016100	ENSG00000173418	NAA20	NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1	"N(alpha)-acetyltransferase 20, NatB catalytic subunit"	protein-coding	13.44	0	13.84477987	1.16E-11
chr20-9624	chr20	19954300	19955300	+	14.1	1000	"intron (NM_001242581, intron 7 of 11)"	"intron (NM_001242581, intron 7 of 11)"	-43134	NM_181528	51126	Hs.368783	NM_016100	ENSG00000173418	NAA20	NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1	"N(alpha)-acetyltransferase 20, NatB catalytic subunit"	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr20-9631	chr20	20193888	20194888	+	14.1	1000	"intron (NM_015585, intron 17 of 26)"	"intron (NM_015585, intron 17 of 26)"	-154377	NM_002196	3642	Hs.89584	NM_002196	ENSG00000173404	INSM1	IA-1|IA1	INSM transcriptional repressor 1	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr20-964	chr20	3217955	3221525	+	97.9	3570	promoter-TSS (NM_001174090)	promoter-TSS (NM_001174090)	96	NR_135000	83959	Hs.105607	NM_032034	ENSG00000088836	SLC4A11	BTR1|CDPD1|CHED|CHED2|NABC1|dJ794I6.2	solute carrier family 4 member 11	protein-coding	97.93	14.08	6.955255682	1.41E-37
chr20-9641	chr20	20345369	20346369	+	14.1	1000	Intergenic	CpG	-2896	NM_002196	3642	Hs.89584	NM_002196	ENSG00000173404	INSM1	IA-1|IA1	INSM transcriptional repressor 1	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr20-9661	chr20	21030149	21031149	+	14.7	1000	Intergenic	Intergenic	-75975	NM_001163022	55857	Hs.187635	NM_018474	ENSG00000088970	KIZ	C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69	kizuna centrosomal protein	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-9665	chr20	21072366	21074795	+	41.6	2429	Intergenic	MIRb|SINE|MIR	-33044	NM_001163022	55857	Hs.187635	NM_018474	ENSG00000088970	KIZ	C20orf19|HT013|Kizuna|NCRNA00153|PLK1S1|RP69	kizuna centrosomal protein	protein-coding	41.61	7.28	5.715659341	2.23E-14
chr20-9674	chr20	21488152	21493015	+	76.8	4863	Intergenic	CpG	4081	NM_002509	4821	Hs.516922	NM_002509	ENSG00000125820	NKX2-2	NKX2.2|NKX2B	NK2 homeobox 2	protein-coding	76.81	7.77	9.885456885	2.93E-38
chr20-971	chr20	6850430	6851974	+	34.6	1544	Intergenic	Intergenic	102457	NM_001200	650	Hs.73853	NM_001200	ENSG00000125845	BMP2	BDA2|BMP2A	bone morphogenetic protein 2	protein-coding	34.56	6.31	5.477020602	4.08E-12
chr20-9714	chr20	22790723	22791723	+	14.7	1000	Intergenic	Intergenic	-203068	NR_109883	101929685	Hs.563018	NR_109883	ENSG00000237396	LINC01384	-	long intergenic non-protein coding RNA 1384	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr20-9722	chr20	23048141	23049141	+	14.1	1000	Intergenic	Intergenic	18336	NM_012072	22918	Hs.97199	NM_012072	ENSG00000125810	CD93	C1QR1|C1qR(P)|C1qRP|CDw93|ECSM3|MXRA4|dJ737E23.1	CD93 molecule	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr20-9725	chr20	23100678	23101678	+	15.4	1000	Intergenic	Intergenic	12095	NR_034149	200261	Hs.352228	NM_182535	ENSG00000233746	LINC00656	-	long intergenic non-protein coding RNA 656	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr20-9735	chr20	23480055	23481055	+	13.4	1000	Intergenic	MSTB1|LTR|ERVL-MaLR	8817	NM_001281730	10047	Hs.121602	NM_005492	ENSG00000125815	CST8	CRES|CTES5	cystatin 8	protein-coding	13.44	1.46	9.205479452	3.57E-07
chr20-9739	chr20	23627184	23628184	+	15.4	1000	Intergenic	AluJb|SINE|Alu	-8999	NM_001288614	1471	Hs.304682	NM_000099	ENSG00000101439	CST3	ARMD11|HEL-S-2	cystatin C	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-9741	chr20	23977882	23978882	+	14.1	1000	Intergenic	AluSx|SINE|Alu	-8966	NM_178311	92086	Hs.355394	NM_080920	ENSG00000149435	GGTLC1	GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2	gamma-glutamyltransferase light chain 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr20-9743	chr20	23985367	23986367	+	14.7	1000	Intergenic	LTR54|LTR|ERV1	-16451	NM_178311	92086	Hs.355394	NM_080920	ENSG00000149435	GGTLC1	GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2	gamma-glutamyltransferase light chain 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr20-9744	chr20	23988940	23989940	+	14.1	1000	Intergenic	MIR|SINE|MIR	-20024	NM_178311	92086	Hs.355394	NM_080920	ENSG00000149435	GGTLC1	GGTL6|GGTLA3|GGTLA4|dJ831C21.1|dJ831C21.2	gamma-glutamyltransferase light chain 1	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr20-9766	chr20	24628427	24629853	+	23.7	1426	"intron (NM_024893, intron 3 of 3)"	"intron (NM_024893, intron 3 of 3)"	178698	NM_001323607	79953	Hs.124638	NM_024893	ENSG00000101463	SYNDIG1	C20orf39|DSPC2|IFITMD5|TMEM90B	synapse differentiation inducing 1	protein-coding	23.68	4.37	5.418764302	2.46E-08
chr20-9767	chr20	24632635	24633635	+	15.4	1000	"intron (NM_024893, intron 3 of 3)"	"intron (NM_024893, intron 3 of 3)"	182693	NM_001323607	79953	Hs.124638	NM_024893	ENSG00000101463	SYNDIG1	C20orf39|DSPC2|IFITMD5|TMEM90B	synapse differentiation inducing 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-9771	chr20	24656511	24657842	+	21.8	1331	Intergenic	Intergenic	206734	NM_001323607	79953	Hs.124638	NM_024893	ENSG00000101463	SYNDIG1	C20orf39|DSPC2|IFITMD5|TMEM90B	synapse differentiation inducing 1	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr20-978	chr20	14132421	14133681	+	26.2	1260	"intron (NM_080676, intron 3 of 16)"	"intron (NM_080676, intron 3 of 16)"	156905	NM_080676	140733	Hs.661576	NM_080676	ENSG00000172264	MACROD2	C20orf133	MACRO domain containing 2	protein-coding	26.24	4.85	5.410309278	4.26E-09
chr20-9782	chr20	25122000	25124842	+	35.2	2842	"non-coding (NR_027093, exon 4 of 4)"	"non-coding (NR_027093, exon 4 of 4)"	5208	NR_027093	284798	Hs.334934	NR_027091	ENSG00000230725	LOC284798	-	uncharacterized LOC284798	ncRNA	35.2	8.74	4.027459954	4.36E-09
chr20-9793	chr20	30034114	30035114	+	14.1	1000	"intron (NM_153324, intron 1 of 1)"	L1MEc|LINE|L1	6292	NR_126450	245936	Hs.122509	NM_153324	ENSG00000180424	DEFB123	DEFB-23|DEFB23|ESC42-RELD	defensin beta 123	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr20-9802	chr20	30474895	30475895	+	16	1000	"intron (NR_134519, intron 4 of 17)"	MIR|SINE|MIR	-16848	NM_080611	128853	Hs.434108	NM_080611	ENSG00000149599	DUSP15	C20orf57|VHY	dual specificity phosphatase 15	protein-coding	16	2.91	5.498281787	4.98E-06
chr20-9821	chr20	31549317	31550317	+	15.4	1000	Intergenic	Intergenic	42422	NM_080675	140732	Hs.375186	NM_080675	ENSG00000167098	SUN5	SPAG4L|SPGF16|TSARG4|dJ726C3.1	Sad1 and UNC84 domain containing 5	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr20-983	chr20	19713236	19714903	+	31.4	1667	Intergenic	AluSx|SINE|Alu	-153096	NM_001242581	54453	Hs.472270	NM_018993	ENSG00000132669	RIN2	MACS|RASSF4	Ras and Rab interactor 2	protein-coding	31.36	3.4	9.223529412	1.89E-15
chr20-9833	chr20	31789001	31790307	+	24.3	1306	"intron (NR_026760, intron 4 of 8)"	"intron (NR_026760, intron 4 of 8)"	8243	NR_026760	317716	Hs.434194	NM_173859	ENSG00000183566	BPIFA4P	BASE	"BPI fold containing family A member 4, pseudogene"	pseudo	24.32	5.34	4.554307116	9.72E-08
chr20-984	chr20	19993421	19994677	+	23	1256	Intergenic	AluSg7|SINE|Alu	-3885	NM_181528	51126	Hs.368783	NM_016100	ENSG00000173418	NAA20	NAT3|NAT3P|NAT5|NAT5P|dJ1002M8.1	"N(alpha)-acetyltransferase 20, NatB catalytic subunit"	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr20-9850	chr20	34192510	34194028	+	21.8	1518	"intron (NR_119376, intron 4 of 43)"	L2c|LINE|L2	2215	NR_119376	80307	Hs.72222	NR_001442	ENSG00000088340	FER1L4	C20orf124	"fer-1 like family member 4, pseudogene"	pseudo	21.76	4.37	4.979405034	1.32E-07
chr20-9854	chr20	34670992	34671992	+	14.7	1000	Intergenic	MER41A|LTR|ERV1	-7934	NM_001258331	2036	Hs.437422	NM_012156	ENSG00000088367	EPB41L1	4.1N|MRD11	erythrocyte membrane protein band 4.1 like 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr20-9856	chr20	34705427	34706427	+	16	1000	"intron (NM_001258329, intron 2 of 22)"	"intron (NM_001258329, intron 2 of 22)"	25295	NM_177996	2036	Hs.437422	NM_012156	ENSG00000088367	EPB41L1	4.1N|MRD11	erythrocyte membrane protein band 4.1 like 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr20-986	chr20	21560658	21561658	+	22.4	1000	"intron (NR_109880, intron 1 of 3)"	L1ME2z|LINE|L1	10496	NR_109880	101929625	Hs.542413	NR_109880		LINC01727	-	long intergenic non-protein coding RNA 1727	ncRNA	22.4	4.85	4.618556701	5.54E-07
chr20-9860	chr20	34735747	34736747	+	14.1	1000	"intron (NM_001258330, intron 3 of 20)"	"intron (NM_001258330, intron 3 of 20)"	-6415	NM_012156	2036	Hs.437422	NM_012156	ENSG00000088367	EPB41L1	4.1N|MRD11	erythrocyte membrane protein band 4.1 like 1	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr20-9891	chr20	36052447	36055108	+	33.3	2661	Intergenic	L2c|LINE|L2	79246	NM_198291	6714	Hs.195659	NM_005417	ENSG00000197122	SRC	ASV|SRC1|THC6|c-SRC|p60-Src	"SRC proto-oncogene, non-receptor tyrosine kinase"	protein-coding	33.28	7.77	4.283140283	1.68E-09
chr20-9904	chr20	36785976	36787327	+	18.6	1351	"intron (NM_001323318, intron 1 of 11)"	"intron (NM_001323318, intron 1 of 11)"	7180	NM_004613	7052	Hs.517033	NM_004613	ENSG00000198959	TGM2	TG(C)|TGC	transglutaminase 2	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr20-9906	chr20	36830887	36831887	+	14.7	1000	Intergenic	Intergenic	-36407	NM_001323316	7052	Hs.517033	NM_004613	ENSG00000198959	TGM2	TG(C)|TGC	transglutaminase 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr20-9910	chr20	36902884	36903884	+	15.4	1000	"intron (NR_104170, intron 1 of 1)"	L1MC3|LINE|L1	-14210	NM_001029864	85449	Hs.472690	NM_001029864	ENSG00000149633	KIAA1755	-	KIAA1755	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr20-9927	chr20	37243271	37244271	+	14.1	1000	"intron (NM_001164431, intron 1 of 14)"	"intron (NM_001164431, intron 1 of 14)"	13194	NM_001164431	343578	Hs.451997	NM_001164431	ENSG00000124143	ARHGAP40	C20orf95|dJ1100H13.4	Rho GTPase activating protein 40	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr20-9931	chr20	37325423	37331099	+	74.9	5676	Intergenic	(GAA)n|Simple_repeat|Simple_repeat	-24844	NM_080552	140679	Hs.179080	NM_080552	ENSG00000101438	SLC32A1	VGAT|VIAAT	solute carrier family 32 member 1	protein-coding	74.89	15.53	4.822279459	2.13E-21
chr20-9942	chr20	38043657	38044959	+	24.3	1302	Intergenic	Intergenic	-190917	NR_027124	339568	Hs.434319	NR_027124	ENSG00000230324	LINC01734	-	long intergenic non-protein coding RNA 1734	ncRNA	24.32	5.82	4.178694158	3.56E-07
chr20-9947	chr20	38074843	38075843	+	14.1	1000	Intergenic	L2c|LINE|L2	-221952	NR_027124	339568	Hs.434319	NR_027124	ENSG00000230324	LINC01734	-	long intergenic non-protein coding RNA 1734	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr20-9967	chr20	38613660	38614660	+	15.4	1000	Intergenic	MamRep38|DNA|hAT	-18943	NR_109936	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr20-9972	chr20	38831598	38833585	+	26.9	1987	Intergenic	Intergenic	199488	NR_109937	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	26.88	5.34	5.033707865	3.94E-09
chr20-9975	chr20	38866608	38868553	+	32	1945	Intergenic	MLT1H1|LTR|ERVL-MaLR	234477	NR_109937	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	32	5.82	5.498281787	2.32E-11
chr20-9976	chr20	38883971	38884971	+	14.7	1000	Intergenic	Intergenic	251368	NR_109937	100505663	Hs.559348	NR_109936	ENSG00000237767	LINC01370	HI-LNC25|HILNC25	long intergenic non-protein coding RNA 1370	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr20-9985	chr20	39259177	39260177	+	15.4	1000	Intergenic	Intergenic	58203	NM_005461	9935	Hs.169487	NM_005461	ENSG00000204103	MAFB	DURS3|KRML|MCTO	MAF bZIP transcription factor B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr21-108	chr21	34749560	34751091	+	28.8	1531	Intergenic	Intergenic	-24877	NM_005534	3460	Hs.634632	NM_005534	ENSG00000159128	IFNGR2	AF-1|IFGR2|IFNGT1|IMD28	interferon gamma receptor 2	protein-coding	28.8	3.88	7.422680412	1.97E-12
chr21-109	chr21	36931505	36932505	+	20.5	1000	"intron (NR_073512, intron 1 of 2)"	L1M5|LINE|L1	21057	NR_073512	100506403	Hs.536609	NR_073512	ENSG00000159216	LOC100506403	-	uncharacterized LOC100506403	ncRNA	20.48	4.85	4.222680412	2.52E-06
chr21-121	chr21	34323852	34324852	+	19.2	1000	Intergenic	Intergenic	-6844	NR_135522	102724502	Hs.130572	NR_135522	ENSG00000228961	LOC102724502	-	uncharacterized LOC102724502	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr21-127	chr21	40444554	40445554	+	20.5	1000	Intergenic	MER53|DNA|hAT	-95354	NR_109962	101928435	Hs.385528	NR_109962	ENSG00000232837	LINC01700	-	long intergenic non-protein coding RNA 1700	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr21-138	chr21	37348945	37350410	+	24.3	1465	"intron (NR_110418, intron 4 of 5)"	"intron (NR_110418, intron 4 of 5)"	27288	NR_110418	101928269	Hs.589909	NR_110418		LOC101928269	-	uncharacterized LOC101928269	ncRNA	24.32	4.85	5.01443299	2.27E-08
chr21-139	chr21	37383700	37384700	+	19.8	1000	Intergenic	AluSz6|SINE|Alu	6582	NR_110419	100996609	Hs.742062	NR_110419		LINC01436	-	long intergenic non-protein coding RNA 1436	ncRNA	19.84	4.37	4.540045767	3.16E-06
chr21-141	chr21	37837906	37838906	+	19.8	1000	"intron (NM_001146077, intron 2 of 2)"	MER103C|DNA|hAT-Charlie	333	NM_012130	23562	Hs.660278	NM_012130	ENSG00000159261	CLDN14	DFNB29	claudin 14	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr21-142	chr21	38049806	38050806	+	19.8	1000	Intergenic	AluSz|SINE|Alu	-21127	NM_005069	6493	Hs.146186	NM_005069	ENSG00000159263	SIM2	HMC13F06|HMC29C01|SIM|bHLHe15	single-minded family bHLH transcription factor 2	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr21-144	chr21	39613410	39614660	+	23.7	1250	"intron (NM_001276438, intron 1 of 2)"	"intron (NM_001276438, intron 1 of 2)"	12198	NM_001276437	3772	Hs.411299	NM_002243	ENSG00000157551	KCNJ15	IRKK|KIR1.3|KIR4.2	potassium voltage-gated channel subfamily J member 15	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr21-146	chr21	42439466	42440734	+	21.8	1268	Intergenic	Intergenic	79891	NR_024100	284835	Hs.106234	NR_024100	ENSG00000226496	LINC00323	C21orf130|NCRNA00323|PRED42	long intergenic non-protein coding RNA 323	ncRNA	21.76	5.34	4.074906367	1.97E-06
chr21-147	chr21	42905930	42907469	+	25	1539	Intergenic	AluJr|SINE|Alu	-26614	NM_005656	7113	Hs.439309	NM_005656	ENSG00000184012	TMPRSS2	PP9284|PRSS10	"transmembrane protease, serine 2"	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr21-152	chr21	46473350	46475585	+	37.8	2235	Intergenic	L1MEc|LINE|L1	18659	NR_027292	728039	Hs.309203	NM_032653	ENSG00000235374	SSR4P1	C21orf122|PRED57|PRED90	signal sequence receptor subunit 4 pseudogene 1	pseudo	37.76	4.37	8.640732265	1.21E-17
chr21-154	chr21	46807682	46814800	+	103.1	7118	Intergenic	Intergenic	-13811	NM_130445	80781	Hs.517356	NM_030582	ENSG00000182871	COL18A1	KNO|KNO1|KS	collagen type XVIII alpha 1 chain	protein-coding	103.05	13.59	7.582781457	4.72E-42
chr21-155	chr21	46841952	46843217	+	22.4	1265	"intron (NR_027498, intron 1 of 2)"	"intron (NR_027498, intron 1 of 2)"	2371	NR_028082	378832	Hs.517353	NM_199175	ENSG00000183535	COL18A1-AS1	C21orf123|NCRNA00175|PRED80	COL18A1 antisense RNA 1	ncRNA	22.4	2.91	7.697594502	3.87E-10
chr21-157	chr21	47559550	47560854	+	21.1	1304	"intron (NM_006657, intron 10 of 14)"	"intron (NM_006657, intron 10 of 14)"	15279	NM_001320412	10841	Hs.415846	NM_006657	ENSG00000160282	FTCD	LCHC1	formimidoyltransferase cyclodeaminase	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr21-170	chr21	34401347	34403382	+	33.9	2035	TTS (NM_005806)	TTS (NM_005806)	4148	NM_005806	10215	Hs.176977	NM_005806	ENSG00000205927	OLIG2	BHLHB1|OLIGO2|PRKCBP2|RACK17|bHLHe19	oligodendrocyte lineage transcription factor 2	protein-coding	33.92	4.85	6.993814433	7.28E-14
chr21-174	chr21	36988094	36989094	+	19.2	1000	Intergenic	Intergenic	-35532	NR_073512	100506403	Hs.536609	NR_073512	ENSG00000159216	LOC100506403	-	uncharacterized LOC100506403	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr21-175	chr21	37043476	37044818	+	23	1342	Intergenic	Intergenic	-48866	NR_030414	768219		NR_030414	ENSG00000211590	MIR802	MIRN802|hsa-mir-802	microRNA 802	ncRNA	23.04	4.37	5.272311213	2.46E-08
chr21-176	chr21	37170716	37171716	+	18.6	1000	Intergenic	AluJb|SINE|Alu	78203	NR_030414	768219		NR_030414	ENSG00000211590	MIR802	MIRN802|hsa-mir-802	microRNA 802	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr21-177	chr21	37182926	37183926	+	16.6	1000	Intergenic	L1M6|LINE|L1	-75317	NR_144547	54036	Hs.228809	NR_144547		PPP1R2P2	-	protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 2	pseudo	16.64	2.91	5.718213058	8.60E-07
chr21-18	chr21	36958063	36960321	+	42.9	2258	Intergenic	Intergenic	-6130	NR_073512	100506403	Hs.536609	NR_073512	ENSG00000159216	LOC100506403	-	uncharacterized LOC100506403	ncRNA	42.89	9.22	4.651843818	2.16E-12
chr21-184	chr21	40898457	40901216	+	45.4	2759	Intergenic	Intergenic	76056	NM_007341	6450	Hs.473847	NM_007341	ENSG00000185437	SH3BGR	21-GARP	SH3 domain binding glutamate rich protein	protein-coding	45.45	3.88	11.71391753	3.74E-25
chr21-187	chr21	42059144	42060144	+	18.6	1000	"intron (NM_001389, intron 3 of 32)"	"intron (NM_001389, intron 3 of 32)"	-56951	NR_046774	100874326	Hs.679746	NR_046774	ENSG00000233756	DSCAM-IT1	zag4	DSCAM intronic transcript 1	ncRNA	18.56	3.4	5.458823529	8.42E-07
chr21-190	chr21	44726731	44729771	+	47.4	3040	Intergenic	Intergenic	23668	NR_103713	100126693	Hs.473952	NR_103713		LINC00322	C21orf136|NCRNA00322	long intergenic non-protein coding RNA 322	ncRNA	47.37	10.19	4.648675172	6.97E-14
chr21-192	chr21	44789896	44790896	+	19.2	1000	Intergenic	Intergenic	-8167	NR_131902	101928399	Hs.517319	NR_131902	ENSG00000237989	LINC01679	TCONS_00029157	long intergenic non-protein coding RNA 1679	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr21-195	chr21	45709227	45710227	+	19.2	1000	"intron (NM_000383, intron 6 of 13)"	"intron (NM_000383, intron 6 of 13)"	4006	NM_000383	326	Hs.129829	NM_000383	ENSG00000160224	AIRE	AIRE1|APECED|APS1|APSI|PGA1	autoimmune regulator	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr21-197	chr21	46119973	46121223	+	19.2	1250	"intron (NM_001272037, intron 1 of 12)"	"intron (NM_001272037, intron 1 of 12)"	3511	NM_198699	386685	Hs.297526	NM_198699	ENSG00000189169	KRTAP10-12	KAP10.12|KRTAP18-12|KRTAP18.12	keratin associated protein 10-12	protein-coding	19.2	1.46	13.15068493	1.82E-12
chr21-198	chr21	46143080	46144678	+	32.6	1598	Intergenic	Intergenic	-12384	NM_001272037	54084	Hs.660703	NM_144991	ENSG00000175894	TSPEAR	C21orf29|DFNB98|TSP-EAR	thrombospondin type laminin G domain and EAR repeats	protein-coding	32.64	5.34	6.112359551	3.79E-12
chr21-202	chr21	47414870	47418267	+	50.6	3397	"intron (NM_001848, intron 20 of 34)"	"intron (NM_001848, intron 20 of 34)"	14905	NM_001848	1291	Hs.474053	NM_001848	ENSG00000142156	COL6A1	BTHLM1|OPLL|UCHMD1	collagen type VI alpha 1 chain	protein-coding	50.57	12.62	4.007131537	1.94E-12
chr21-220	chr21	33347570	33348570	+	17.9	1000	"intron (NM_014586, intron 7 of 10)"	Charlie7|DNA|hAT-Charlie	102442	NM_014586	30811	Hs.109437	NM_014586	ENSG00000142149	HUNK	-	hormonally up-regulated Neu-associated kinase	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr21-221	chr21	34381123	34382123	+	17.9	1000	Intergenic	Intergenic	-16593	NM_005806	10215	Hs.176977	NM_005806	ENSG00000205927	OLIG2	BHLHB1|OLIGO2|PRKCBP2|RACK17|bHLHe19	oligodendrocyte lineage transcription factor 2	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr21-225	chr21	34519358	34520358	+	17.3	1000	Intergenic	AluSx1|SINE|Alu	22683	NR_024102	728409	Hs.125234	NR_024102	ENSG00000229086	LINC01548	C21orf54	long intergenic non-protein coding RNA 1548	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr21-226	chr21	36063053	36064705	+	31.4	1652	"intron (NM_053277, intron 1 of 5)"	"intron (NM_053277, intron 1 of 5)"	22417	NM_053277	54102	Hs.473695	NM_053277	ENSG00000159212	CLIC6	CLIC1L	chloride intracellular channel 6	protein-coding	31.36	3.88	8.082474227	3.25E-14
chr21-229	chr21	37091426	37092426	+	18.6	1000	Intergenic	Intergenic	-1087	NR_030414	768219		NR_030414	ENSG00000211590	MIR802	MIRN802|hsa-mir-802	microRNA 802	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr21-230	chr21	37914296	37915296	+	17.9	1000	"intron (NM_001146077, intron 1 of 2)"	"intron (NM_001146077, intron 1 of 2)"	321	NM_001146078	23562	Hs.660278	NM_012130	ENSG00000159261	CLDN14	DFNB29	claudin 14	protein-coding	17.92	1.46	12.2739726	2.41E-11
chr21-235	chr21	39522586	39523586	+	17.3	1000	"intron (NR_026839, intron 2 of 2)"	"intron (NR_026839, intron 2 of 2)"	29541	NR_026839	84677	Hs.733345	NM_032589	ENSG00000198054	DSCR8	C21orf65|CT25.1a|CT25.1b|MMA-1|MMA-1a|MMA-1b|MMA1|MTAG2	Down syndrome critical region 8	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr21-24	chr21	46160018	46161277	+	26.9	1259	Intergenic	MER61-int|LTR|ERV1	-29152	NM_001272037	54084	Hs.660703	NM_144991	ENSG00000175894	TSPEAR	C21orf29|DFNB98|TSP-EAR	thrombospondin type laminin G domain and EAR repeats	protein-coding	26.88	2.43	11.0617284	2.19E-15
chr21-242	chr21	42631962	42635604	+	47.4	3642	"intron (NM_138991, intron 7 of 7)"	L1MC4|LINE|L1	-54878	NM_058186	54097	Hs.473877	NM_058186	ENSG00000183844	FAM3B	2-21|C21orf11|C21orf76|ORF9|PANDER|PRED44	family with sequence similarity 3 member B	protein-coding	47.37	11.65	4.066094421	3.24E-12
chr21-246	chr21	43637477	43639934	+	48	2457	promoter-TSS (NM_004915)	promoter-TSS (NM_004915)	-562	NM_004915	9619	Hs.124649	NM_004915	ENSG00000160179	ABCG1	ABC8|WHITE1	ATP binding cassette subfamily G member 1	protein-coding	48.01	8.25	5.819393939	1.22E-16
chr21-248	chr21	44015671	44018640	+	39.7	2969	Intergenic	MER21A|LTR|ERVL	18050	NR_131192	101928233	Hs.534827	NR_131192	ENSG00000225431	LINC01671	-	long intergenic non-protein coding RNA 1671	ncRNA	39.69	8.74	4.541189931	1.21E-11
chr21-250	chr21	44178142	44179392	+	23.7	1250	"intron (NM_002606, intron 10 of 19)"	"intron (NM_002606, intron 10 of 19)"	21337	NR_135517	101928311	Hs.570404	NR_135517	ENSG00000283051	LINC01668	-	long intergenic non-protein coding RNA 1668	ncRNA	23.68	3.88	6.103092784	4.22E-09
chr21-252	chr21	44627893	44631138	+	41	3245	Intergenic	Intergenic	39169	NM_001320719	102724652	Hs.184085	NM_001314050	ENSG00000276076	LOC102724652	CRYAA	alpha-crystallin A chain	protein-coding	40.97	8.74	4.687643021	2.55E-12
chr21-256	chr21	45590836	45594896	+	77.4	4060	Intergenic	Intergenic	39372	NM_004649	8209	Hs.413482	NM_004649	ENSG00000160221	C21orf33	ES1|GT335|HES1|KNPH|KNPI	chromosome 21 open reading frame 33	protein-coding	77.45	11.16	6.939964158	6.20E-30
chr21-261	chr21	47456269	47458960	+	41.6	2691	Intergenic	CpG	55951	NM_001848	1291	Hs.474053	NM_001848	ENSG00000142156	COL6A1	BTHLM1|OPLL|UCHMD1	collagen type VI alpha 1 chain	protein-coding	41.61	7.77	5.355212355	1.22E-13
chr21-282	chr21	33365523	33368656	+	42.9	3133	"intron (NM_014586, intron 9 of 10)"	L2a|LINE|L2	91519	NR_038033	100551499	Hs.224449	NR_038033		LINC00159	C21orf44|NCRNA00159	long intergenic non-protein coding RNA 159	ncRNA	42.89	8.74	4.907322654	5.23E-13
chr21-283	chr21	33503255	33504581	+	21.1	1326	Intergenic	Intergenic	-45310	NR_038033	100551499	Hs.224449	NR_038033		LINC00159	C21orf44|NCRNA00159	long intergenic non-protein coding RNA 159	ncRNA	21.12	4.85	4.354639175	2.52E-06
chr21-288	chr21	34442009	34443009	+	17.3	1000	promoter-TSS (NM_138983)	promoter-TSS (NM_138983)	59	NM_138983	116448	Hs.56663	NM_138983	ENSG00000184221	OLIG1	BHLHB6|BHLHE21	oligodendrocyte transcription factor 1	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr21-295	chr21	37308774	37309774	+	17.3	1000	Intergenic	Intergenic	50531	NR_144547	54036	Hs.228809	NR_144547		PPP1R2P2	-	protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 2	pseudo	17.28	0.97	17.81443299	2.06E-12
chr21-296	chr21	37326860	37328427	+	23.7	1567	"intron (NR_110418, intron 5 of 5)"	"intron (NR_110418, intron 5 of 5)"	49322	NR_110418	101928269	Hs.589909	NR_110418		LOC101928269	-	uncharacterized LOC101928269	ncRNA	23.68	4.85	4.882474227	1.15E-07
chr21-297	chr21	37371163	37372418	+	24.3	1255	"intron (NR_110418, intron 1 of 5)"	MIRb|SINE|MIR	5175	NR_110418	101928269	Hs.589909	NR_110418		LOC101928269	-	uncharacterized LOC101928269	ncRNA	24.32	4.85	5.01443299	2.27E-08
chr21-300	chr21	37939303	37940303	+	17.9	1000	"intron (NM_001146077, intron 1 of 2)"	"intron (NM_001146077, intron 1 of 2)"	9064	NM_001146077	23562	Hs.660278	NM_012130	ENSG00000159261	CLDN14	DFNB29	claudin 14	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr21-305	chr21	39348679	39349679	+	16	1000	Intergenic	Intergenic	-60438	NM_002240	3763	Hs.626242	NM_002240	ENSG00000157542	KCNJ6	BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2	potassium voltage-gated channel subfamily J member 6	protein-coding	16	2.43	6.58436214	7.90E-07
chr21-310	chr21	40032397	40034533	+	35.8	2136	promoter-TSS (NM_001243428)	promoter-TSS (NM_001243428)	239	NR_111949	2078	Hs.473819	NM_004449	ENSG00000157554	ERG	erg-3|p55	"ERG, ETS transcription factor"	protein-coding	35.84	3.4	10.54117647	1.88E-19
chr21-313	chr21	41011569	41012826	+	20.5	1257	"intron (NM_001278650, intron 1 of 2)"	"intron (NM_001278650, intron 1 of 2)"	-17050	NM_006057	10317	Hs.733638	NM_006057	ENSG00000183778	B3GALT5	"B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5"	"beta-1,3-galactosyltransferase 5"	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr21-314	chr21	41044776	41046822	+	40.3	2046	Intergenic	Intergenic	16552	NM_033170	10317	Hs.733638	NM_006057	ENSG00000183778	B3GALT5	"B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5"	"beta-1,3-galactosyltransferase 5"	protein-coding	40.33	6.31	6.391442155	3.11E-15
chr21-316	chr21	43102577	43106541	+	53.1	3964	"intron (NR_024367, intron 1 of 2)"	"intron (NR_024367, intron 1 of 2)"	5097	NR_024367	54090	Hs.570442	NR_024367		LINC00111	C21orf21|NCRNA00111	long intergenic non-protein coding RNA 111	ncRNA	53.13	13.11	4.052631579	3.69E-13
chr21-318	chr21	44185992	44189314	+	46.7	3322	"intron (NM_002606, intron 15 of 19)"	"intron (NM_002606, intron 15 of 19)"	12451	NR_135517	101928311	Hs.570404	NR_135517	ENSG00000283051	LINC01668	-	long intergenic non-protein coding RNA 1668	ncRNA	46.73	7.77	6.014157014	1.14E-16
chr21-325	chr21	46797839	46798839	+	17.3	1000	Intergenic	Intergenic	-26713	NM_130445	80781	Hs.517356	NM_030582	ENSG00000182871	COL18A1	KNO|KNO1|KS	collagen type XVIII alpha 1 chain	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr21-339	chr21	27531643	27532643	+	16.6	1000	"intron (NM_001136131, intron 1 of 15)"	"intron (NM_001136131, intron 1 of 15)"	10995	NM_000484	351	Hs.434980	NM_000484	ENSG00000142192	APP	AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2	amyloid beta precursor protein	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr21-340	chr21	33783406	33784728	+	20.5	1322	promoter-TSS (NR_135467)	promoter-TSS (NR_135467)	67	NM_001320745	59271	Hs.208358	NM_058187	ENSG00000166979	EVA1C	B18|B19|C21orf63|C21orf64|FAM176C|PRED34|SUE21	eva-1 homolog C	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr21-345	chr21	36815122	36816122	+	16	1000	"intron (NR_073512, intron 2 of 2)"	"intron (NR_073512, intron 2 of 2)"	137440	NR_073512	100506403	Hs.536609	NR_073512	ENSG00000159216	LOC100506403	-	uncharacterized LOC100506403	ncRNA	16	2.91	5.498281787	4.98E-06
chr21-352	chr21	37361546	37362546	+	17.3	1000	"intron (NR_110418, intron 1 of 5)"	AluSq|SINE|Alu	14919	NR_110418	101928269	Hs.589909	NR_110418		LOC101928269	-	uncharacterized LOC101928269	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr21-353	chr21	37916899	37917899	+	16.6	1000	"intron (NM_001146077, intron 1 of 2)"	"intron (NM_001146077, intron 1 of 2)"	-2282	NM_001146078	23562	Hs.660278	NM_012130	ENSG00000159261	CLDN14	DFNB29	claudin 14	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr21-361	chr21	39171834	39173124	+	18.6	1290	"intron (NM_002240, intron 2 of 3)"	"intron (NM_002240, intron 2 of 3)"	116262	NM_002240	3763	Hs.626242	NM_002240	ENSG00000157542	KCNJ6	BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2	potassium voltage-gated channel subfamily J member 6	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr21-363	chr21	39278107	39279107	+	16.6	1000	"intron (NM_002240, intron 1 of 3)"	"intron (NM_002240, intron 1 of 3)"	10134	NM_002240	3763	Hs.626242	NM_002240	ENSG00000157542	KCNJ6	BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2	potassium voltage-gated channel subfamily J member 6	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr21-364	chr21	39505992	39506992	+	16.6	1000	"intron (NR_026839, intron 2 of 2)"	"intron (NR_026839, intron 2 of 2)"	12947	NR_026839	84677	Hs.733345	NM_032589	ENSG00000198054	DSCR8	C21orf65|CT25.1a|CT25.1b|MMA-1|MMA-1a|MMA-1b|MMA1|MTAG2	Down syndrome critical region 8	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr21-365	chr21	39598493	39599493	+	17.3	1000	Intergenic	HERV3-int|LTR|ERV1	-2844	NM_001276439	3772	Hs.411299	NM_002243	ENSG00000157551	KCNJ15	IRKK|KIR1.3|KIR4.2	potassium voltage-gated channel subfamily J member 15	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr21-371	chr21	43770373	43771373	+	17.3	1000	"intron (NM_005423, intron 1 of 3)"	"intron (NM_005423, intron 1 of 3)"	335	NM_005423	7032	Hs.2979	NM_005423	ENSG00000160181	TFF2	SML1|SP	trefoil factor 2	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr21-373	chr21	44881625	44882625	+	16	1000	"non-coding (NR_026863, exon 4 of 4)"	"non-coding (NR_026863, exon 4 of 4)"	12221	NR_026960	284836	Hs.146127	NM_194309	ENSG00000188660	LINC00319	C21orf125|NCRNA00319|PRED49	long intergenic non-protein coding RNA 319	ncRNA	16	2.91	5.498281787	4.98E-06
chr21-377	chr21	45675259	45676881	+	22.4	1622	"intron (NM_175867, intron 6 of 11)"	"intron (NM_175867, intron 6 of 11)"	5374	NR_135514	105372833	Hs.605816	NR_135514	ENSG00000232010	LOC105372833	-	uncharacterized LOC105372833	ncRNA	22.4	2.43	9.218106996	2.49E-11
chr21-379	chr21	46130507	46135776	+	99.9	5269	Intergenic	Intergenic	-1646	NM_001272037	54084	Hs.660703	NM_144991	ENSG00000175894	TSPEAR	C21orf29|DFNB98|TSP-EAR	thrombospondin type laminin G domain and EAR repeats	protein-coding	99.85	12.62	7.912044374	1.73E-42
chr21-405	chr21	18769217	18770217	+	16	1000	Intergenic	HAL1|LINE|L1	-41491	NR_037586	100505929	Hs.46707	NM_001005521	ENSG00000232560	LINC01549	C21orf37	long intergenic non-protein coding RNA 1549	ncRNA	16	2.43	6.58436214	7.90E-07
chr21-409	chr21	31534976	31536287	+	19.8	1311	Intergenic	Intergenic	3340	NM_012131	26285	Hs.258589	NM_012131	ENSG00000156282	CLDN17	-	claudin 17	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr21-411	chr21	34332026	34334014	+	30.1	1988	TTS (NR_135522)	TTS (NR_135522)	1824	NR_135522	102724502	Hs.130572	NR_135522	ENSG00000228961	LOC102724502	-	uncharacterized LOC102724502	ncRNA	30.08	5.34	5.632958801	1.33E-10
chr21-412	chr21	34445724	34447305	+	23	1581	Intergenic	Intergenic	4064	NM_138983	116448	Hs.56663	NM_138983	ENSG00000184221	OLIG1	BHLHB6|BHLHE21	oligodendrocyte transcription factor 1	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr21-415	chr21	34501782	34502782	+	16.6	1000	Intergenic	L1MC4|LINE|L1	-6276	NR_109961	101928107	Hs.382669	NR_109961	ENSG00000226527	LOC101928107	-	uncharacterized LOC101928107	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr21-419	chr21	35877254	35878254	+	16	1000	"intron (NM_000219, intron 2 of 3)"	"intron (NM_000219, intron 2 of 3)"	5859	NM_001270403	3753	Hs.121495	NM_000219	ENSG00000180509	KCNE1	ISK|JLNS|JLNS2|LQT2/5|LQT5|MinK	potassium voltage-gated channel subfamily E regulatory subunit 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr21-420	chr21	36132326	36133326	+	16.6	1000	"intron (NR_038885, intron 1 of 2)"	"intron (NR_038885, intron 1 of 2)"	14704	NR_038885	100506385	Hs.120179	NR_038885	ENSG00000234380	LINC01426	lincRNA-uc002yug.2	long intergenic non-protein coding RNA 1426	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr21-423	chr21	36849664	36850664	+	15.4	1000	"intron (NR_073512, intron 1 of 2)"	MIR|SINE|MIR	102898	NR_073512	100506403	Hs.536609	NR_073512	ENSG00000159216	LOC100506403	-	uncharacterized LOC100506403	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr21-430	chr21	37305294	37306294	+	16	1000	Intergenic	Intergenic	47051	NR_144547	54036	Hs.228809	NR_144547		PPP1R2P2	-	protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 2	pseudo	16	2.91	5.498281787	4.98E-06
chr21-434	chr21	37480185	37481185	+	16.6	1000	"intron (NR_040084, intron 1 of 3)"	HERVIP10F-int|LTR|ERV1	18253	NR_040084	100133286	Hs.728809	NR_040084	ENSG00000230212	LOC100133286	-	uncharacterized LOC100133286	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr21-441	chr21	37983759	37985175	+	20.5	1416	Intergenic	Intergenic	-35600	NM_001146077	23562	Hs.660278	NM_012130	ENSG00000159261	CLDN14	DFNB29	claudin 14	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr21-442	chr21	38000249	38001249	+	15.4	1000	Intergenic	Intergenic	-51882	NM_001146077	23562	Hs.660278	NM_012130	ENSG00000159261	CLDN14	DFNB29	claudin 14	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr21-445	chr21	39051284	39053000	+	28.8	1716	"intron (NM_002240, intron 3 of 3)"	"intron (NM_002240, intron 3 of 3)"	236599	NM_002240	3763	Hs.626242	NM_002240	ENSG00000157542	KCNJ6	BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2	potassium voltage-gated channel subfamily J member 6	protein-coding	28.8	4.37	6.590389016	1.84E-11
chr21-450	chr21	39642464	39643848	+	21.1	1384	"intron (NM_170736, intron 1 of 2)"	MIR3|SINE|MIR	-1186	NM_170737	3772	Hs.411299	NM_002243	ENSG00000157551	KCNJ15	IRKK|KIR1.3|KIR4.2	potassium voltage-gated channel subfamily J member 15	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr21-451	chr21	39662955	39663955	+	14.7	1000	"intron (NM_170737, intron 1 of 2)"	"intron (NM_170737, intron 1 of 2)"	19113	NM_170737	3772	Hs.411299	NM_002243	ENSG00000157551	KCNJ15	IRKK|KIR1.3|KIR4.2	potassium voltage-gated channel subfamily J member 15	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr21-456	chr21	40966637	40967637	+	16	1000	Intergenic	AluJr|SINE|Alu	17612	NR_026543	114041	Hs.375120	NM_153754	ENSG00000184809	B3GALT5-AS1	C21orf88	B3GALT5 antisense RNA 1	ncRNA	16	1.94	8.24742268	7.67E-08
chr21-457	chr21	41049686	41051273	+	25.6	1587	Intergenic	Intergenic	21232	NM_033170	10317	Hs.733638	NM_006057	ENSG00000183778	B3GALT5	"B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5"	"beta-1,3-galactosyltransferase 5"	protein-coding	25.6	3.4	7.529411765	9.95E-12
chr21-461	chr21	41097538	41098538	+	16	1000	Intergenic	Intergenic	-19296	NM_001080444	150084	Hs.422120	NM_001080444	ENSG00000183067	IGSF5	GSF5|JAM4	immunoglobulin superfamily member 5	protein-coding	16	2.91	5.498281787	4.98E-06
chr21-463	chr21	42496297	42497897	+	21.8	1600	Intergenic	Intergenic	22894	NR_024100	284835	Hs.106234	NR_024100	ENSG00000226496	LINC00323	C21orf130|NCRNA00323|PRED42	long intergenic non-protein coding RNA 323	ncRNA	21.76	3.88	5.608247423	2.53E-08
chr21-464	chr21	42518124	42519124	+	15.4	1000	"intron (NR_024100, intron 1 of 1)"	"intron (NR_024100, intron 1 of 1)"	1367	NR_024100	284835	Hs.106234	NR_024100	ENSG00000226496	LINC00323	C21orf130|NCRNA00323|PRED42	long intergenic non-protein coding RNA 323	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr21-465	chr21	42531032	42532032	+	16	1000	Intergenic	Intergenic	-7952	NR_036167	100423023		NR_036167	ENSG00000263681	MIR3197	-	microRNA 3197	ncRNA	16	0	16.4818808	1.26E-14
chr21-467	chr21	42580733	42582969	+	34.6	2236	"intron (NM_138992, intron 1 of 7)"	"intron (NM_138992, intron 1 of 7)"	-24685	NM_182832	191585	Hs.472492	NM_182832		PLAC4	C21orf115|PRED78	placenta specific 4	protein-coding	34.56	4.37	7.908466819	8.51E-16
chr21-471	chr21	42933765	42934765	+	16	1000	Intergenic	Intergenic	-54180	NM_005656	7113	Hs.439309	NM_005656	ENSG00000184012	TMPRSS2	PP9284|PRSS10	"transmembrane protease, serine 2"	protein-coding	16	2.91	5.498281787	4.98E-06
chr21-474	chr21	43066724	43067724	+	16	1000	Intergenic	BLACKJACK|DNA|hAT-Blackjack	-32238	NR_024367	54090	Hs.570442	NR_024367		LINC00111	C21orf21|NCRNA00111	long intergenic non-protein coding RNA 111	ncRNA	16	0.97	16.49484536	3.54E-11
chr21-476	chr21	43383126	43384126	+	16.6	1000	Intergenic	Intergenic	-9627	NM_015500	25966	Hs.473894	NM_015500	ENSG00000157617	C2CD2	C21orf25|C21orf258|TMEM24L	C2 calcium dependent domain containing 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr21-479	chr21	44169087	44170087	+	15.4	1000	"intron (NM_002606, intron 8 of 19)"	"intron (NM_002606, intron 8 of 19)"	30517	NR_135517	101928311	Hs.570404	NR_135517	ENSG00000283051	LINC01668	-	long intergenic non-protein coding RNA 1668	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr21-483	chr21	44867516	44871620	+	65.3	4104	promoter-TSS (NR_026960)	promoter-TSS (NR_026960)	-336	NR_026960	284836	Hs.146127	NM_194309	ENSG00000188660	LINC00319	C21orf125|NCRNA00319|PRED49	long intergenic non-protein coding RNA 319	ncRNA	65.29	7.28	8.968406593	7.76E-31
chr21-485	chr21	44940121	44941121	+	16	1000	Intergenic	Tigger15a|DNA|TcMar-Tigger	-41207	NR_136540	102724354	Hs.592161	NR_136540	ENSG00000280191	LINC01669	-	long intergenic non-protein coding RNA 1669	ncRNA	16	2.91	5.498281787	4.98E-06
chr21-486	chr21	45129818	45130818	+	16	1000	Intergenic	AluSx1|SINE|Alu	-8660	NM_003681	8566	Hs.284491	NM_003681	ENSG00000160209	PDXK	C21orf124|C21orf97|HEL-S-1a|PKH|PNK|PRED79	"pyridoxal (pyridoxine, vitamin B6) kinase"	protein-coding	16	2.91	5.498281787	4.98E-06
chr21-487	chr21	45249241	45250241	+	15.4	1000	Intergenic	Intergenic	-17293	NR_026961	284837	Hs.592159	NM_194310	ENSG00000215458	AATBC	-	apoptosis associated transcript in bladder cancer	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr21-489	chr21	45646793	45647793	+	16	1000	"3' UTR (NM_001283051, exon 6 of 6)"	"3' UTR (NM_001283051, exon 6 of 6)"	13594	NM_001283050	23308	Hs.14155	NM_015259	ENSG00000160223	ICOSLG	B7-H2|B7H2|B7RP-1|B7RP1|CD275|GL50|ICOS-L|ICOSL|LICOS	inducible T-cell costimulator ligand	protein-coding	16	2.91	5.498281787	4.98E-06
chr21-491	chr21	45693972	45694972	+	16.6	1000	Intergenic	MER34B|LTR|ERV1	-11249	NM_000383	326	Hs.129829	NM_000383	ENSG00000160224	AIRE	AIRE1|APECED|APS1|APSI|PGA1	autoimmune regulator	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr21-496	chr21	46150627	46151627	+	16.6	1000	Intergenic	MLT1A0-int|LTR|ERVL-MaLR	-19632	NM_001272037	54084	Hs.660703	NM_144991	ENSG00000175894	TSPEAR	C21orf29|DFNB98|TSP-EAR	thrombospondin type laminin G domain and EAR repeats	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr21-497	chr21	46155734	46156734	+	16.6	1000	Intergenic	Intergenic	-24739	NM_001272037	54084	Hs.660703	NM_144991	ENSG00000175894	TSPEAR	C21orf29|DFNB98|TSP-EAR	thrombospondin type laminin G domain and EAR repeats	protein-coding	16.64	0	17.14115603	3.68E-16
chr21-499	chr21	46780985	46788123	+	106.9	7138	Intergenic	Intergenic	-22649	NR_103811	388830	Hs.592162	NR_103811	ENSG00000237664	LINC00316	C21orf111|NCRNA00316|PRED59	long intergenic non-protein coding RNA 316	ncRNA	106.89	14.56	7.341346154	1.48E-42
chr21-50	chr21	37506384	37509505	+	59.5	3121	"intron (NM_001236, intron 1 of 2)"	CpG	681	NM_001236	874	Hs.154510	NM_001236	ENSG00000159231	CBR3	HEL-S-25|SDR21C2|hCBR3	carbonyl reductase 3	protein-coding	59.53	11.16	5.334229391	6.70E-19
chr21-501	chr21	46792901	46793901	+	15.4	1000	Intergenic	Intergenic	-31496	NR_103811	388830	Hs.592162	NR_103811	ENSG00000237664	LINC00316	C21orf111|NCRNA00316|PRED59	long intergenic non-protein coding RNA 316	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr21-504	chr21	46834558	46835558	+	16	1000	"intron (NM_130445, intron 2 of 42)"	"intron (NM_130445, intron 2 of 42)"	-5078	NR_052004	100874236	Hs.589901	NR_052004	ENSG00000224574	COL18A1-AS2	-	COL18A1 antisense RNA 2	ncRNA	16	1.94	8.24742268	7.67E-08
chr21-506	chr21	47377066	47378066	+	16	1000	Intergenic	MER34C_|LTR|ERV1	-15318	NR_109931	101928796	Hs.130919	NR_109931		LOC101928796	-	uncharacterized LOC101928796	ncRNA	16	2.91	5.498281787	4.98E-06
chr21-51	chr21	44074245	44076893	+	46.1	2648	"intron (NM_001001580, intron 1 of 13)"	"intron (NM_001001580, intron 1 of 13)"	1707	NM_001001572	5152	Hs.473927	NM_002606	ENSG00000160191	PDE9A	HSPDE9A2	phosphodiesterase 9A	protein-coding	46.09	3.88	11.87886598	3.15E-26
chr21-525	chr21	27401637	27403028	+	21.8	1391	"intron (NM_001136131, intron 5 of 15)"	"intron (NM_001136131, intron 5 of 15)"	110376	NM_001136016	351	Hs.434980	NM_000484	ENSG00000142192	APP	AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2	amyloid beta precursor protein	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr21-527	chr21	27467671	27468671	+	16	1000	"intron (NM_001136130, intron 1 of 16)"	"intron (NM_001136130, intron 1 of 16)"	44537	NM_001136016	351	Hs.434980	NM_000484	ENSG00000142192	APP	AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2	amyloid beta precursor protein	protein-coding	16	3.88	4.12371134	7.91E-05
chr21-528	chr21	27479582	27480582	+	14.7	1000	"intron (NM_001136130, intron 1 of 16)"	"intron (NM_001136130, intron 1 of 16)"	32626	NM_001136016	351	Hs.434980	NM_000484	ENSG00000142192	APP	AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2	amyloid beta precursor protein	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr21-53	chr21	46803394	46806132	+	49.9	2738	Intergenic	Intergenic	-20289	NM_130445	80781	Hs.517356	NM_030582	ENSG00000182871	COL18A1	KNO|KNO1|KS	collagen type XVIII alpha 1 chain	protein-coding	49.93	5.82	8.579037801	2.68E-23
chr21-533	chr21	33208090	33209090	+	16	1000	Intergenic	L1MB4|LINE|L1	-37038	NM_014586	30811	Hs.109437	NM_014586	ENSG00000142149	HUNK	-	hormonally up-regulated Neu-associated kinase	protein-coding	16	0.97	16.49484536	3.54E-11
chr21-534	chr21	33486152	33487152	+	16	1000	Intergenic	Intergenic	-28044	NR_038033	100551499	Hs.224449	NR_038033		LINC00159	C21orf44|NCRNA00159	long intergenic non-protein coding RNA 159	ncRNA	16	0	16.4818808	1.26E-14
chr21-535	chr21	33516004	33517004	+	16	1000	Intergenic	Intergenic	-57896	NR_038033	100551499	Hs.224449	NR_038033		LINC00159	C21orf44|NCRNA00159	long intergenic non-protein coding RNA 159	ncRNA	16	2.91	5.498281787	4.98E-06
chr21-538	chr21	34420178	34421178	+	16	1000	Intergenic	Intergenic	-9457	NR_104056	101930746	Hs.580934	NR_104056	ENSG00000232539	LINC00945	-	long intergenic non-protein coding RNA 945	ncRNA	16	3.4	4.705882353	2.25E-05
chr21-543	chr21	36106593	36107593	+	15.4	1000	"intron (NR_024351, intron 1 of 5)"	X3_LINE|LINE|RTE-BovB	2386	NR_024351	54064	Hs.436868	NR_024351	ENSG00000230978	LINC00160	C21orf52|NCRNA00160	long intergenic non-protein coding RNA 160	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr21-544	chr21	36539174	36540174	+	15.4	1000	Intergenic	Intergenic	-118079	NM_001754	861	Hs.149261	NM_001754	ENSG00000159216	RUNX1	AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha	runt related transcription factor 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr21-545	chr21	36685711	36686711	+	14.1	1000	Intergenic	Intergenic	-264616	NM_001754	861	Hs.149261	NM_001754	ENSG00000159216	RUNX1	AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha	runt related transcription factor 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr21-547	chr21	37125571	37127953	+	31.4	2382	Intergenic	Intergenic	33749	NR_030414	768219		NR_030414	ENSG00000211590	MIR802	MIRN802|hsa-mir-802	microRNA 802	ncRNA	31.36	7.77	4.036036036	3.04E-08
chr21-549	chr21	37167759	37168759	+	14.1	1000	Intergenic	AluJo|SINE|Alu	75246	NR_030414	768219		NR_030414	ENSG00000211590	MIR802	MIRN802|hsa-mir-802	microRNA 802	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr21-553	chr21	37488604	37489854	+	16.6	1250	"intron (NR_040084, intron 1 of 3)"	AluJo|SINE|Alu	9709	NR_040084	100133286	Hs.728809	NR_040084	ENSG00000230212	LOC100133286	-	uncharacterized LOC100133286	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr21-558	chr21	38096067	38097405	+	18.6	1338	"intron (NM_005069, intron 5 of 10)"	AluJr|SINE|Alu	25303	NM_009586	6493	Hs.146186	NM_005069	ENSG00000159263	SIM2	HMC13F06|HMC29C01|SIM|bHLHe15	single-minded family bHLH transcription factor 2	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr21-560	chr21	39060168	39061168	+	15.4	1000	"intron (NM_002240, intron 3 of 3)"	"intron (NM_002240, intron 3 of 3)"	228073	NM_002240	3763	Hs.626242	NM_002240	ENSG00000157542	KCNJ6	BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2	potassium voltage-gated channel subfamily J member 6	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr21-561	chr21	39111887	39112887	+	15.4	1000	"intron (NM_002240, intron 2 of 3)"	"intron (NM_002240, intron 2 of 3)"	176354	NM_002240	3763	Hs.626242	NM_002240	ENSG00000157542	KCNJ6	BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2	potassium voltage-gated channel subfamily J member 6	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr21-564	chr21	39337063	39338478	+	22.4	1415	Intergenic	Intergenic	-49029	NM_002240	3763	Hs.626242	NM_002240	ENSG00000157542	KCNJ6	BIR1|GIRK-2|GIRK2|KATP-2|KATP2|KCNJ7|KIR3.2|KPLBS|hiGIRK2	potassium voltage-gated channel subfamily J member 6	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr21-566	chr21	39626845	39628583	+	28.2	1738	promoter-TSS (NM_001276436)	promoter-TSS (NM_001276436)	-906	NM_001276436	3772	Hs.411299	NM_002243	ENSG00000157551	KCNJ15	IRKK|KIR1.3|KIR4.2	potassium voltage-gated channel subfamily J member 15	protein-coding	28.16	2.43	11.58847737	1.88E-16
chr21-570	chr21	41017516	41018516	+	16	1000	"intron (NM_001278650, intron 1 of 2)"	"intron (NM_001278650, intron 1 of 2)"	-11231	NM_006057	10317	Hs.733638	NM_006057	ENSG00000183778	B3GALT5	"B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5"	"beta-1,3-galactosyltransferase 5"	protein-coding	16	0.49	32.65306122	1.26E-14
chr21-572	chr21	41296762	41297762	+	16	1000	"intron (NM_006198, intron 2 of 2)"	"intron (NM_006198, intron 2 of 2)"	57915	NM_006198	5121	Hs.80296	NM_006198	ENSG00000183036	PCP4	PEP-19	Purkinje cell protein 4	protein-coding	16	1.94	8.24742268	7.67E-08
chr21-574	chr21	42538847	42540100	+	17.3	1253	promoter-TSS (NM_012105)	promoter-TSS (NM_012105)	-11	NR_036167	100423023		NR_036167	ENSG00000263681	MIR3197	-	microRNA 3197	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr21-582	chr21	43781461	43782461	+	14.1	1000	TTS (NM_003225)	TTS (NM_003225)	4683	NM_003225	7031	Hs.162807	NM_003225	ENSG00000160182	TFF1	BCEI|D21S21|HP1.A|HPS2|pNR-2|pS2	trefoil factor 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr21-585	chr21	44045549	44046549	+	15.4	1000	Intergenic	Intergenic	-10844	NR_131192	101928233	Hs.534827	NR_131192	ENSG00000225431	LINC01671	-	long intergenic non-protein coding RNA 1671	ncRNA	15.36	0	15.82260557	1.26E-14
chr21-595	chr21	44863068	44864345	+	23.7	1277	Intergenic	Intergenic	-6198	NR_026960	284836	Hs.146127	NM_194309	ENSG00000188660	LINC00319	C21orf125|NCRNA00319|PRED49	long intergenic non-protein coding RNA 319	ncRNA	23.68	2.91	8.137457045	4.85E-11
chr21-604	chr21	46454456	46455456	+	14.1	1000	Intergenic	Intergenic	-30314	NR_024089	378825	Hs.534828	NR_024089	ENSG00000275874	PICSAR	C21orf113|LINC00162|NCRNA00162|NLC1-C|NLC1C|PRED74	P38 inhibited cutaneous squamous cell carcinoma associated lincRNA	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr21-608	chr21	47392014	47395802	+	46.7	3788	"intron (NR_109931, intron 1 of 1)"	CpG	1024	NR_109931	101928796	Hs.130919	NR_109931		LOC101928796	-	uncharacterized LOC101928796	ncRNA	46.73	11.65	4.011158798	1.33E-11
chr21-609	chr21	47412236	47413236	+	15.4	1000	"intron (NM_001848, intron 19 of 34)"	"intron (NM_001848, intron 19 of 34)"	11073	NM_001848	1291	Hs.474053	NM_001848	ENSG00000142156	COL6A1	BTHLM1|OPLL|UCHMD1	collagen type VI alpha 1 chain	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr21-623	chr21	27304861	27305861	+	14.1	1000	"intron (NM_001136131, intron 11 of 15)"	L1MA4|LINE|L1	-197396	NM_001685	522	Hs.246310	NM_001685	ENSG00000154723	ATP5J	ATP5|ATP5A|ATPM|CF6|F6	"ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6"	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr21-624	chr21	27341026	27342026	+	14.7	1000	"intron (NM_001136131, intron 9 of 15)"	AluY|SINE|Alu	171182	NM_001136016	351	Hs.434980	NM_000484	ENSG00000142192	APP	AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2	amyloid beta precursor protein	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr21-625	chr21	28216744	28218618	+	33.3	1874	promoter-TSS (NM_006988)	promoter-TSS (NM_006988)	47	NM_006988	9510	Hs.643357	NM_006988	ENSG00000154734	ADAMTS1	C3-C5|METH1	ADAM metallopeptidase with thrombospondin type 1 motif 1	protein-coding	33.28	2.91	11.43642612	5.32E-19
chr21-626	chr21	29975273	29976273	+	14.7	1000	Intergenic	Intergenic	64133	NR_026552	118421	Hs.438549	NR_026552	ENSG00000226935	LINC00161	C21orf100|NCRNA00161	long intergenic non-protein coding RNA 161	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr21-630	chr21	33171989	33172989	+	14.1	1000	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-68058	NM_001145444	57466	Hs.17255	NM_020706	ENSG00000156304	SCAF4	SFRS15|SRA4	SR-related CTD associated factor 4	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr21-631	chr21	33285087	33286087	+	14.1	1000	"intron (NM_014586, intron 1 of 10)"	"intron (NM_014586, intron 1 of 10)"	39959	NM_014586	30811	Hs.109437	NM_014586	ENSG00000142149	HUNK	-	hormonally up-regulated Neu-associated kinase	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr21-652	chr21	35849982	35850982	+	14.1	1000	"intron (NM_000219, intron 2 of 3)"	L1MC3|LINE|L1	-18246	NM_001270405	3753	Hs.121495	NM_000219	ENSG00000180509	KCNE1	ISK|JLNS|JLNS2|LQT2/5|LQT5|MinK	potassium voltage-gated channel subfamily E regulatory subunit 1	protein-coding	14.08	0	14.5040551	3.99E-13
chr21-653	chr21	36046105	36048001	+	28.2	1896	"intron (NM_053277, intron 1 of 5)"	"intron (NM_053277, intron 1 of 5)"	5591	NM_053277	54102	Hs.473695	NM_053277	ENSG00000159212	CLIC6	CLIC1L	chloride intracellular channel 6	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr21-667	chr21	37005751	37006751	+	14.1	1000	Intergenic	Intergenic	-53189	NR_073512	100506403	Hs.536609	NR_073512	ENSG00000159216	LOC100506403	-	uncharacterized LOC100506403	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr21-668	chr21	37018434	37019797	+	22.4	1363	Intergenic	Intergenic	-66053	NR_073512	100506403	Hs.536609	NR_073512	ENSG00000159216	LOC100506403	-	uncharacterized LOC100506403	ncRNA	22.4	3.88	5.773195876	2.53E-08
chr21-678	chr21	37846998	37847998	+	14.1	1000	"intron (NM_001146077, intron 2 of 2)"	L2|LINE|L2	4890	NM_144492	23562	Hs.660278	NM_012130	ENSG00000159261	CLDN14	DFNB29	claudin 14	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr21-679	chr21	37923862	37925625	+	25.6	1763	"intron (NM_001146077, intron 1 of 2)"	"intron (NM_001146077, intron 1 of 2)"	-9626	NM_001146078	23562	Hs.660278	NM_012130	ENSG00000159261	CLDN14	DFNB29	claudin 14	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr21-684	chr21	38042271	38043271	+	15.4	1000	Intergenic	Intergenic	-28662	NM_005069	6493	Hs.146186	NM_005069	ENSG00000159263	SIM2	HMC13F06|HMC29C01|SIM|bHLHe15	single-minded family bHLH transcription factor 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr21-685	chr21	38062655	38063655	+	15.4	1000	Intergenic	Intergenic	-8278	NM_005069	6493	Hs.146186	NM_005069	ENSG00000159263	SIM2	HMC13F06|HMC29C01|SIM|bHLHe15	single-minded family bHLH transcription factor 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr21-687	chr21	38392015	38393015	+	14.7	1000	TTS (NM_001317777)	TTS (NM_001317777)	13652	NM_018962	53820	Hs.254560	NM_018962	ENSG00000183145	RIPPLY3	DSCR6	ripply transcriptional repressor 3	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr21-690	chr21	39434706	39435706	+	15.4	1000	"intron (NM_005867, intron 2 of 2)"	"intron (NM_005867, intron 2 of 2)"	58248	NM_005867	10281	Hs.23251	NM_005867	ENSG00000184029	DSCR4	DCRB|DSCRB	Down syndrome critical region 4	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr21-692	chr21	39684282	39686678	+	40.3	2396	Intergenic	L2c|LINE|L2	32518	NR_110545	102724678	Hs.635675	NR_110545		LINC01423	-	long intergenic non-protein coding RNA 1423	ncRNA	40.33	5.82	6.929553265	3.74E-16
chr21-694	chr21	40024343	40025343	+	17.3	1000	"intron (NM_001136154, intron 1 of 11)"	"intron (NM_001136154, intron 1 of 11)"	7748	NM_001243428	2078	Hs.473819	NM_004449	ENSG00000157554	ERG	erg-3|p55	"ERG, ETS transcription factor"	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr21-695	chr21	40026969	40027969	+	14.7	1000	"intron (NM_001136154, intron 1 of 11)"	"intron (NM_001136154, intron 1 of 11)"	5122	NM_001243428	2078	Hs.473819	NM_004449	ENSG00000157554	ERG	erg-3|p55	"ERG, ETS transcription factor"	protein-coding	14.72	0	15.16333034	3.99E-13
chr21-697	chr21	40123395	40124395	+	14.1	1000	"intron (NR_027065, intron 1 of 6)"	"intron (NR_027065, intron 1 of 6)"	286	NR_027067	400866	Hs.278704	NM_001001789	ENSG00000223806	LINC00114	C21orf24|NCRNA00114	long intergenic non-protein coding RNA 114	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr21-702	chr21	40976612	40977612	+	13.4	1000	TTS (NR_026543)	TTS (NR_026543)	7637	NR_026543	114041	Hs.375120	NM_153754	ENSG00000184809	B3GALT5-AS1	C21orf88	B3GALT5 antisense RNA 1	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr21-705	chr21	41041227	41042227	+	15.4	1000	Intergenic	MIRb|SINE|MIR	12480	NM_033170	10317	Hs.733638	NM_006057	ENSG00000183778	B3GALT5	"B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5"	"beta-1,3-galactosyltransferase 5"	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr21-707	chr21	41057721	41058721	+	15.4	1000	Intergenic	Intergenic	28974	NM_033170	10317	Hs.733638	NM_006057	ENSG00000183778	B3GALT5	"B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5"	"beta-1,3-galactosyltransferase 5"	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr21-708	chr21	41067729	41068729	+	15.4	1000	Intergenic	Intergenic	38982	NM_033170	10317	Hs.733638	NM_006057	ENSG00000183778	B3GALT5	"B3GalT-V|B3GalTx|B3T5|GLCT5|beta-1,3-GalTase 5|beta-3-Gx-T5|beta3Gal-T5"	"beta-1,3-galactosyltransferase 5"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr21-710	chr21	41123627	41124627	+	15.4	1000	"intron (NM_001080444, intron 2 of 8)"	L1PB2|LINE|L1	6793	NM_001080444	150084	Hs.422120	NM_001080444	ENSG00000183067	IGSF5	GSF5|JAM4	immunoglobulin superfamily member 5	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr21-712	chr21	41324269	41325699	+	22.4	1430	Intergenic	MLT1D|LTR|ERVL-MaLR	85637	NM_006198	5121	Hs.80296	NM_006198	ENSG00000183036	PCP4	PEP-19	Purkinje cell protein 4	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr21-713	chr21	41639939	41640939	+	14.1	1000	"intron (NM_001389, intron 11 of 32)"	"intron (NM_001389, intron 11 of 32)"	-56081	NR_039917	100616148		NR_039917	ENSG00000263973	MIR4760	-	microRNA 4760	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr21-714	chr21	41922240	41923240	+	15.4	1000	"intron (NM_001389, intron 3 of 32)"	MER57B2|LTR|ERV1	79953	NR_046774	100874326	Hs.679746	NR_046774	ENSG00000233756	DSCAM-IT1	zag4	DSCAM intronic transcript 1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr21-719	chr21	42574771	42575771	+	14.1	1000	"intron (NM_138992, intron 1 of 7)"	L2a|LINE|L2	-18105	NM_182832	191585	Hs.472492	NM_182832		PLAC4	C21orf115|PRED78	placenta specific 4	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr21-724	chr21	43131510	43132926	+	19.2	1416	"non-coding (NR_027272, exon 6 of 6)"	"non-coding (NR_027272, exon 6 of 6)"	3717	NR_027272	150135	Hs.350679	NM_152506	ENSG00000236384	LINC00479	C21orf129|PRED76	long intergenic non-protein coding RNA 479	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr21-726	chr21	43503050	43504050	+	15.4	1000	"intron (NM_001004416, intron 2 of 22)"	L2a|LINE|L2	12124	NM_173568	89766	Hs.242520	NM_173568	ENSG00000177398	UMODL1	-	uromodulin like 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr21-733	chr21	44138877	44139877	+	14.1	1000	"intron (NM_001001579, intron 3 of 16)"	L1ME2|LINE|L1	60727	NR_135517	101928311	Hs.570404	NR_135517	ENSG00000283051	LINC01668	-	long intergenic non-protein coding RNA 1668	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr21-734	chr21	44181400	44183400	+	30.7	2000	"intron (NM_002606, intron 14 of 19)"	"intron (NM_002606, intron 14 of 19)"	17704	NR_135517	101928311	Hs.570404	NR_135517	ENSG00000283051	LINC01668	-	long intergenic non-protein coding RNA 1668	ncRNA	30.72	2.91	10.55670103	6.73E-17
chr21-736	chr21	44721744	44722998	+	16.6	1254	Intergenic	Intergenic	29548	NR_103713	100126693	Hs.473952	NR_103713		LINC00322	C21orf136|NCRNA00322	long intergenic non-protein coding RNA 322	ncRNA	16.64	0	17.14115603	3.68E-16
chr21-738	chr21	44746915	44749668	+	37.8	2753	"intron (NR_103713, intron 1 of 2)"	"intron (NR_103713, intron 1 of 2)"	3628	NR_103713	100126693	Hs.473952	NR_103713		LINC00322	C21orf136|NCRNA00322	long intergenic non-protein coding RNA 322	ncRNA	37.76	8.25	4.576969697	6.71E-11
chr21-741	chr21	44783870	44785205	+	17.9	1335	Intergenic	Intergenic	-2308	NR_131902	101928399	Hs.517319	NR_131902	ENSG00000237989	LINC01679	TCONS_00029157	long intergenic non-protein coding RNA 1679	ncRNA	17.92	2.43	7.374485597	1.53E-08
chr21-742	chr21	44799959	44800959	+	14.7	1000	Intergenic	Intergenic	-18230	NR_131902	101928399	Hs.517319	NR_131902	ENSG00000237989	LINC01679	TCONS_00029157	long intergenic non-protein coding RNA 1679	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr21-746	chr21	45606597	45607597	+	14.7	1000	Intergenic	Intergenic	53603	NM_004649	8209	Hs.413482	NM_004649	ENSG00000160221	C21orf33	ES1|GT335|HES1|KNPH|KNPI	chromosome 21 open reading frame 33	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr21-747	chr21	45653474	45661871	+	122.9	8397	"intron (NM_015259, intron 2 of 6)"	AluSx1|SINE|Alu	3215	NM_001283050	23308	Hs.14155	NM_015259	ENSG00000160223	ICOSLG	B7-H2|B7H2|B7RP-1|B7RP1|CD275|GL50|ICOS-L|ICOSL|LICOS	inducible T-cell costimulator ligand	protein-coding	122.9	30.09	4.084413426	3.55E-29
chr21-749	chr21	45911871	45912871	+	14.1	1000	Intergenic	Intergenic	-13556	NR_103707	54082	Hs.570444	NR_103707	ENSG00000235890	TSPEAR-AS1	C21orf31	TSPEAR antisense RNA 1	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr21-750	chr21	45933756	45934756	+	15.4	1000	"intron (NR_103707, intron 6 of 6)"	"intron (NR_103707, intron 6 of 6)"	-2842	NR_026548	114043	Hs.592163	NM_153204		TSPEAR-AS2	C21orf90	TSPEAR antisense RNA 2	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr21-754	chr21	46464744	46465744	+	15.4	1000	Intergenic	L1MC1|LINE|L1	27882	NR_027292	728039	Hs.309203	NM_032653	ENSG00000235374	SSR4P1	C21orf122|PRED57|PRED90	signal sequence receptor subunit 4 pseudogene 1	pseudo	15.36	3.4	4.517647059	2.25E-05
chr21-76	chr21	38072739	38078638	+	107.5	5899	"intron (NM_005069, intron 1 of 10)"	MIR|SINE|MIR	4255	NM_009586	6493	Hs.146186	NM_005069	ENSG00000159263	SIM2	HMC13F06|HMC29C01|SIM|bHLHe15	single-minded family bHLH transcription factor 2	protein-coding	107.53	16.5	6.516969697	1.65E-39
chr21-761	chr21	46985437	46986714	+	20.5	1277	Intergenic	AluY|SINE|Alu	-23690	NM_194255	6573	Hs.84190	NM_003056	ENSG00000173638	SLC19A1	CHMD|FOLT|IFC1|REFC|RFC1	solute carrier family 19 member 1	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr21-763	chr21	46991865	46992865	+	14.7	1000	Intergenic	Intergenic	-29980	NM_194255	6573	Hs.84190	NM_003056	ENSG00000173638	SLC19A1	CHMD|FOLT|IFC1|REFC|RFC1	solute carrier family 19 member 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr21-766	chr21	47436102	47437102	+	14.7	1000	Intergenic	L1MD1|LINE|L1	34939	NM_001848	1291	Hs.474053	NM_001848	ENSG00000142156	COL6A1	BTHLM1|OPLL|UCHMD1	collagen type VI alpha 1 chain	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr21-93	chr21	36775484	36776484	+	20.5	1000	"intron (NR_073512, intron 2 of 2)"	"intron (NR_073512, intron 2 of 2)"	177078	NR_073512	100506403	Hs.536609	NR_073512	ENSG00000159216	LOC100506403	-	uncharacterized LOC100506403	ncRNA	20.48	1.94	10.55670103	9.02E-12
chr21-95	chr21	38081031	38083967	+	55.7	2936	"intron (NM_005069, intron 2 of 10)"	MIR|SINE|MIR	11066	NM_009586	6493	Hs.146186	NM_005069	ENSG00000159263	SIM2	HMC13F06|HMC29C01|SIM|bHLHe15	single-minded family bHLH transcription factor 2	protein-coding	55.69	4.85	11.48247423	3.17E-30
chr21-98	chr21	42545862	42547129	+	23	1267	TTS (NM_182832)	TTS (NM_182832)	6767	NM_138992	25825	Hs.43047	NM_012105	ENSG00000182240	BACE2	AEPLC|ALP56|ASP1|ASP21|BAE2|CDA13|CEAP1|DRAP	beta-site APP-cleaving enzyme 2	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr22-100	chr22	48839856	48841107	+	27.5	1251	Intergenic	Intergenic	-44791	NM_001082967	25817	Hs.436854	NM_015381	ENSG00000219438	FAM19A5	QLLK5208|TAFA-5|TAFA5|UNQ5208	"family with sequence similarity 19 member A5, C-C motif chemokine like"	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr22-1004	chr22	46771867	46774494	+	46.1	2627	"intron (NM_014246, intron 23 of 34)"	"intron (NM_014246, intron 23 of 34)"	41882	NM_001282783	55687	Hs.439524	NM_018006	ENSG00000100416	TRMU	LCAL3|MTO2|MTU1|TRMT|TRMT1|TRNT1	tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	protein-coding	46.09	6.31	7.304278922	1.95E-19
chr22-1006	chr22	46839612	46841493	+	39	1881	"intron (NM_014246, intron 2 of 34)"	MLT1C|LTR|ERVL-MaLR	92515	NM_014246	9620	Hs.252387	NM_014246	ENSG00000075275	CELSR1	ADGRC1|CDHF9|FMI2|HFMI2|ME2	cadherin EGF LAG seven-pass G-type receptor 1	protein-coding	39.04	4.85	8.049484536	2.24E-17
chr22-101	chr22	49073259	49074520	+	30.1	1261	"intron (NM_015381, intron 2 of 3)"	"intron (NM_015381, intron 2 of 3)"	101771	NM_015381	25817	Hs.436854	NM_015381	ENSG00000219438	FAM19A5	QLLK5208|TAFA-5|TAFA5|UNQ5208	"family with sequence similarity 19 member A5, C-C motif chemokine like"	protein-coding	30.08	1.94	15.50515464	1.31E-19
chr22-1010	chr22	46907322	46908584	+	21.8	1262	"intron (NM_014246, intron 1 of 34)"	"intron (NM_014246, intron 1 of 34)"	25114	NM_014246	9620	Hs.252387	NM_014246	ENSG00000075275	CELSR1	ADGRC1|CDHF9|FMI2|HFMI2|ME2	cadherin EGF LAG seven-pass G-type receptor 1	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr22-1011	chr22	46918538	46919864	+	21.8	1326	"intron (NM_014246, intron 1 of 34)"	AluSx|SINE|Alu	13866	NM_014246	9620	Hs.252387	NM_014246	ENSG00000075275	CELSR1	ADGRC1|CDHF9|FMI2|HFMI2|ME2	cadherin EGF LAG seven-pass G-type receptor 1	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr22-1012	chr22	46921625	46922625	+	20.5	1000	"intron (NM_014246, intron 1 of 34)"	"intron (NM_014246, intron 1 of 34)"	10942	NM_014246	9620	Hs.252387	NM_014246	ENSG00000075275	CELSR1	ADGRC1|CDHF9|FMI2|HFMI2|ME2	cadherin EGF LAG seven-pass G-type receptor 1	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr22-1023	chr22	48765252	48766604	+	22.4	1352	Intergenic	Intergenic	95752	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	22.4	2.91	7.697594502	3.87E-10
chr22-1027	chr22	48901767	48903024	+	22.4	1257	"intron (NM_001082967, intron 1 of 3)"	"intron (NM_001082967, intron 1 of 3)"	17123	NM_001082967	25817	Hs.436854	NM_015381	ENSG00000219438	FAM19A5	QLLK5208|TAFA-5|TAFA5|UNQ5208	"family with sequence similarity 19 member A5, C-C motif chemokine like"	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr22-1032	chr22	49509674	49519017	+	157.5	9343	Intergenic	Intergenic	251763	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	157.46	33.01	4.770069676	2.59E-43
chr22-1033	chr22	49542013	49543293	+	23	1280	Intergenic	Intergenic	280071	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	23.04	4.85	4.750515464	1.15E-07
chr22-1043	chr22	49806589	49812651	+	104.3	6062	"non-coding (NR_110522, exon 3 of 3)"	"non-coding (NR_110522, exon 3 of 3)"	127494	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	104.33	20.87	4.999041687	2.80E-30
chr22-1052	chr22	18917740	18925841	+	126.7	8101	"intron (NM_001195226, intron 1 of 13)"	"intron (NM_001195226, intron 1 of 13)"	2174	NM_001195226	5625	Hs.517352	NM_016335	ENSG00000100033	PRODH	HSPOX2|PIG6|POX|PRODH1|PRODH2|TP53I6	proline dehydrogenase 1	protein-coding	126.74	28.15	4.502309059	2.95E-33
chr22-1056	chr22	19601745	19603071	+	25.6	1326	Intergenic	Intergenic	-48046	NR_024381	150185	Hs.719752	NR_024381		LINC00895	-	long intergenic non-protein coding RNA 895	ncRNA	25.6	3.88	6.597938144	1.00E-10
chr22-1061	chr22	19977041	19979804	+	45.4	2763	"intron (NM_001670, intron 2 of 19)"	"intron (NM_001670, intron 2 of 19)"	25887	NM_001670	421	Hs.713616	NM_001670	ENSG00000099889	ARVCF	-	armadillo repeat gene deleted in velocardiofacial syndrome	protein-coding	45.45	10.68	4.255617978	5.25E-12
chr22-1063	chr22	20210149	20211685	+	25.6	1536	Intergenic	Intergenic	17062	NR_026919	150197	Hs.635544	NM_152508	ENSG00000236499	LINC00896	-	long intergenic non-protein coding RNA 896	ncRNA	25.6	4.85	5.278350515	4.26E-09
chr22-1074	chr22	22934119	22935119	+	17.9	1000	Intergenic	Intergenic	-32851	NM_206956	23532	Hs.30743	NM_006115	ENSG00000185686	PRAME	CT130|MAPE|OIP-4|OIP4	preferentially expressed antigen in melanoma	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr22-1075	chr22	23046528	23047943	+	26.2	1415	Intergenic	Intergenic	58453	NM_199127	91227	Hs.450000	NM_080839	ENSG00000100121	GGTLC2	GGTL4	gamma-glutamyltransferase light chain 2	protein-coding	26.24	2.91	9.017182131	6.53E-13
chr22-1077	chr22	23428069	23429843	+	29.4	1774	"intron (NM_002073, intron 1 of 2)"	"intron (NM_002073, intron 1 of 2)"	16287	NM_002073	2781	Hs.584760	NM_002073	ENSG00000128266	GNAZ	-	G protein subunit alpha z	protein-coding	29.44	5.82	5.058419244	6.85E-10
chr22-1084	chr22	25094241	25096483	+	34.6	2242	Intergenic	Intergenic	-40248	NR_024593	646074	Hs.531306	NM_001025230		POM121L10P	-	"POM121 transmembrane nucleoporin like 10, pseudogene"	pseudo	34.56	7.28	4.747252747	9.40E-11
chr22-109	chr22	25800138	25802601	+	64.6	2463	Intergenic	CpG	-23825	NM_001135772	91355	Hs.634058	NM_182492	ENSG00000100068	LRP5L	-	LDL receptor related protein 5 like	protein-coding	64.65	9.71	6.658084449	1.93E-24
chr22-1090	chr22	25491762	25492762	+	18.6	1000	"intron (NM_001145206, intron 4 of 10)"	"intron (NM_001145206, intron 4 of 10)"	16397	NR_038941	100128531	Hs.662126	NR_038941	ENSG00000203280	LOC100128531	-	uncharacterized LOC100128531	ncRNA	18.56	3.4	5.458823529	8.42E-07
chr22-1094	chr22	25814151	25815428	+	23	1277	Intergenic	AluY|SINE|Alu	-29265	NR_033733	1416	Hs.571835	NR_033733	ENSG00000100058	CRYBB2P1	CRYB2B	crystallin beta B2 pseudogene 1	pseudo	23.04	2.91	7.917525773	4.85E-11
chr22-1096	chr22	26375809	26377351	+	23	1542	"intron (NM_001318245, intron 39 of 43)"	L1ME4a|LINE|L1	-188860	NM_001184773	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr22-1107	chr22	28200699	28201699	+	19.8	1000	Intergenic	Intergenic	-3713	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	"MN1 proto-oncogene, transcriptional regulator"	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr22-1124	chr22	32458005	32459648	+	27.5	1643	"intron (NM_001256314, intron 1 of 13)"	"intron (NM_001256314, intron 1 of 13)"	3669	NM_001256314	6523	Hs.1964	NM_000343	ENSG00000100170	SLC5A1	D22S675|NAGT|SGLT1	solute carrier family 5 member 1	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr22-1126	chr22	32474487	32475487	+	19.2	1000	"intron (NM_001256314, intron 4 of 13)"	"intron (NM_001256314, intron 4 of 13)"	19830	NM_001256314	6523	Hs.1964	NM_000343	ENSG00000100170	SLC5A1	D22S675|NAGT|SGLT1	solute carrier family 5 member 1	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr22-1130	chr22	33196765	33199394	+	49.3	2629	"exon (NM_000362, exon 1 of 5)"	"exon (NM_000362, exon 1 of 5)"	1277	NM_000362	7078	Hs.644633	NM_000362	ENSG00000100234	TIMP3	HSMRK222|K222|K222TA2|SFD	TIMP metallopeptidase inhibitor 3	protein-coding	49.29	7.77	6.343629344	2.96E-18
chr22-1132	chr22	33389779	33390779	+	19.8	1000	"intron (NM_001135774, intron 2 of 13)"	"intron (NM_001135774, intron 2 of 13)"	12527	NM_133633	8224	Hs.608750	NM_003490	ENSG00000185666	SYN3	-	synapsin III	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr22-1135	chr22	34307538	34308869	+	24.3	1331	"intron (NM_004737, intron 1 of 15)"	"intron (NM_004737, intron 1 of 15)"	8207	NM_004737	9215	Hs.474667	NM_004737	ENSG00000133424	LARGE1	LARGE|MDC1D|MDDGA6|MDDGB6	LARGE xylosyl- and glucuronyltransferase 1	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr22-1137	chr22	35946278	35947548	+	23	1270	"intron (NM_014310, intron 2 of 2)"	MIRb|SINE|MIR	9561	NM_014310	23551	Hs.474711	NM_014310	ENSG00000100302	RASD2	MGC:4834|Rhes|TEM2	RASD family member 2	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr22-1156	chr22	37491925	37493239	+	21.1	1314	"intron (NM_153609, intron 4 of 17)"	MIR3|SINE|MIR	7111	NM_153609	164656	Hs.370885	NM_153609	ENSG00000187045	TMPRSS6	IRIDA	"transmembrane protease, serine 6"	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr22-1157	chr22	37498658	37499658	+	18.6	1000	"intron (NM_153609, intron 2 of 17)"	MIR3|SINE|MIR	535	NM_153609	164656	Hs.370885	NM_153609	ENSG00000187045	TMPRSS6	IRIDA	"transmembrane protease, serine 6"	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr22-1159	chr22	37533428	37535750	+	33.9	2322	"intron (NM_001346222, intron 5 of 9)"	L2b|LINE|L2	11441	NM_000878	3560	Hs.474787	NM_000878	ENSG00000100385	IL2RB	CD122|IL15RB|P70-75	interleukin 2 receptor subunit beta	protein-coding	33.92	6.8	4.988235294	1.08E-10
chr22-116	chr22	39549118	39550370	+	28.2	1252	Intergenic	L2|LINE|L2	-1089	NM_001346743	23492	Hs.356416	NM_175709	ENSG00000100307	CBX7	-	chromobox 7	protein-coding	28.16	5.34	5.27340824	7.39E-10
chr22-1166	chr22	37745098	37746098	+	19.8	1000	"intron (NR_110512, intron 1 of 2)"	"intron (NR_110512, intron 1 of 2)"	5281	NR_110515	100506271	Hs.220558	NR_110515	ENSG00000237862	LOC100506271	-	uncharacterized LOC100506271	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr22-1174	chr22	37926555	37927555	+	19.8	1000	Intergenic	HAL1b|LINE|L1	-11845	NM_014550	29775	Hs.57973	NM_014550	ENSG00000100065	CARD10	BIMP1|CARMA3	caspase recruitment domain family member 10	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr22-1175	chr22	37970090	37971893	+	28.2	1803	"intron (NM_006498, intron 1 of 3)"	AluSx1|SINE|Alu	5033	NM_006498	3957	Hs.531776	NM_006498	ENSG00000100079	LGALS2	HL14	galectin 2	protein-coding	28.16	2.43	11.58847737	1.88E-16
chr22-1182	chr22	40022876	40025920	+	50.6	3044	"intron (NM_021096, intron 4 of 36)"	L2b|LINE|L2	57640	NM_001003406	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding	50.57	5.82	8.689003436	2.68E-23
chr22-1184	chr22	40082632	40087648	+	90.3	5016	"3' UTR (NM_001003406, exon 36 of 36)"	"3' UTR (NM_001003406, exon 36 of 36)"	118382	NM_001003406	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding	90.25	22.33	4.041648007	2.39E-21
chr22-1197	chr22	43684216	43686588	+	35.8	2372	"intron (NM_173050, intron 4 of 21)"	"intron (NM_173050, intron 4 of 21)"	13454	NR_134582	101927447	Hs.621227	NR_134582	ENSG00000203527	LOC101927447	-	uncharacterized LOC101927447	ncRNA	35.84	6.31	5.679873217	7.13E-13
chr22-1211	chr22	44226917	44227917	+	19.2	1000	"intron (NM_014351, intron 5 of 6)"	L1ME3|LINE|L1	-19200	NM_198856	64800	Hs.658996	NM_022785	ENSG00000186976	EFCAB6	DJBP|HSCBCIP1|dJ185D5.1	EF-hand calcium binding domain 6	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr22-1216	chr22	44666879	44668863	+	37.1	1984	"intron (NM_001099294, intron 4 of 4)"	"intron (NM_001099294, intron 4 of 4)"	40860	NM_001099294	85352	Hs.6829	NM_001099294	ENSG00000138944	KIAA1644	-	KIAA1644	protein-coding	37.12	6.31	5.882725832	1.20E-13
chr22-1217	chr22	44696139	44697398	+	21.8	1259	"exon (NM_001099294, exon 2 of 5)"	"exon (NM_001099294, exon 2 of 5)"	11963	NM_001099294	85352	Hs.6829	NM_001099294	ENSG00000138944	KIAA1644	-	KIAA1644	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr22-1225	chr22	45406811	45407811	+	19.8	1000	Intergenic	AluSx3|SINE|Alu	-1502	NM_001135862	112885	Hs.254097	NM_138415	ENSG00000056487	PHF21B	BHC80L|PHF4	PHD finger protein 21B	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr22-1228	chr22	45803247	45804247	+	18.6	1000	"intron (NM_148674, intron 2 of 24)"	MER4A|LTR|ERV1	5753	NM_148674	27127	Hs.334176	NM_148674	ENSG00000077935	SMC1B	SMC1BETA|SMC1L2	structural maintenance of chromosomes 1B	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr22-1235	chr22	46365951	46371695	+	97.3	5744	"intron (NM_058238, intron 1 of 3)"	"intron (NM_058238, intron 1 of 3)"	4185	NM_058238	7477	Hs.512714	NM_058238	ENSG00000188064	WNT7B	-	Wnt family member 7B	protein-coding	97.29	17.96	5.417037862	7.81E-31
chr22-1244	chr22	48188487	48189487	+	19.2	1000	"intron (NR_122046, intron 8 of 8)"	"intron (NR_122046, intron 8 of 8)"	161564	NR_122046	284930	Hs.407567	NR_122046	ENSG00000224271	LOC284930	-	uncharacterized LOC284930	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr22-1246	chr22	48484807	48486694	+	33.3	1887	Intergenic	Intergenic	-184426	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	33.28	5.82	5.718213058	4.04E-12
chr22-1249	chr22	48537053	48542095	+	95.4	5042	Intergenic	Intergenic	-130602	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	95.37	23.3	4.093133047	8.73E-23
chr22-1252	chr22	48610037	48611037	+	19.8	1000	Intergenic	Intergenic	-59639	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	19.84	0.97	20.45360825	5.65E-15
chr22-1269	chr22	49751183	49754816	+	58.2	3633	Intergenic	Intergenic	184115	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	58.25	13.11	4.44317315	1.10E-15
chr22-129	chr22	17848448	17854288	+	121.6	5840	"intron (NM_001290046, intron 1 of 18)"	"intron (NM_001290046, intron 1 of 18)"	10529	NM_001290046	27443	Hs.231895	NM_031413	ENSG00000099954	CECR2	-	"CECR2, histone acetyl-lysine reader"	protein-coding	121.62	27.18	4.474613687	8.68E-32
chr22-1294	chr22	20172418	20173763	+	21.1	1345	Intergenic	Intergenic	19351	NR_038460	284865	Hs.638498	NR_038460	ENSG00000249923	LOC284865	-	uncharacterized LOC284865	ncRNA	21.12	3.4	6.211764706	2.41E-08
chr22-1298	chr22	20782183	20783565	+	23.7	1382	"intron (NM_182895, intron 9 of 13)"	AluSp|SINE|Alu	9272	NM_182895	91179	Hs.474251	NM_153334	ENSG00000244486	SCARF2	NSR1|SREC-II|SREC2|SRECRP-1|VDEGS	scavenger receptor class F member 2	protein-coding	23.68	4.37	5.418764302	2.46E-08
chr22-1301	chr22	21383893	21387842	+	78.7	3949	"exon (NM_004173, exon 2 of 5)"	"exon (NM_004173, exon 2 of 5)"	980	NM_004173	6545	Hs.197116	NM_004173	ENSG00000099960	SLC7A4	CAT-4|CAT4|HCAT3|VH	solute carrier family 7 member 4	protein-coding	78.73	17.47	4.506582713	5.20E-21
chr22-1318	chr22	23690253	23691253	+	18.6	1000	Intergenic	L1PA8A|LINE|L1	33560	NR_037839	649264	Hs.600549	NR_037839		CES5AP1	-	carboxylesterase 5A pseudogene 1	pseudo	18.56	3.88	4.783505155	3.85E-06
chr22-1322	chr22	24183582	24185324	+	32	1742	Intergenic	Intergenic	-3254	NM_001002862	91319	Hs.593679	NM_198440	ENSG00000099958	DERL3	C22orf14|IZP6|LLN2|derlin-3	derlin 3	protein-coding	32	3.4	9.411764706	2.00E-16
chr22-1323	chr22	24383771	24384771	+	17.9	1000	promoter-TSS (NM_001293808)	promoter-TSS (NM_001293808)	40	NM_001293814	2952	Hs.268573	NM_000853		GSTT1	-	glutathione S-transferase theta 1	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr22-1325	chr22	25168459	25169459	+	17.9	1000	"intron (NR_045648, intron 1 of 21)"	"intron (NR_045648, intron 1 of 21)"	1728	NM_001008496	440822	Hs.448343	NM_001008496	ENSG00000184571	PIWIL3	HIWI3	piwi like RNA-mediated gene silencing 3	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr22-1333	chr22	26326286	26328498	+	38.4	2212	"intron (NM_001318245, intron 34 of 43)"	"intron (NM_001318245, intron 34 of 43)"	189281	NM_001318245	84700	Hs.417959	NM_032608	ENSG00000133454	MYO18B	KFS4	myosin XVIIIB	protein-coding	38.4	6.8	5.647058824	1.26E-13
chr22-1347	chr22	27529762	27530762	+	18.6	1000	Intergenic	Intergenic	-53216	NM_001318392	105372977	Hs.743180	NM_001318392		LOC105372977	-	uncharacterized LOC105372977	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr22-1350	chr22	29047017	29048017	+	18.6	1000	"intron (NM_001145418, intron 1 of 22)"	AluJb|SINE|Alu	28336	NM_001145418	23331	Hs.387856	NM_015281	ENSG00000100154	TTC28	TPRBK	tetratricopeptide repeat domain 28	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr22-1354	chr22	29341830	29342830	+	17.9	1000	"intron (NM_032173, intron 1 of 8)"	"intron (NM_032173, intron 1 of 8)"	28953	NM_032173	84133	Hs.604200	NM_032173	ENSG00000183579	ZNRF3	BK747E2.3|RNF203	zinc and ring finger 3	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr22-1363	chr22	29465885	29473101	+	143.4	7216	"intron (NM_032045, intron 1 of 9)"	CpG	427	NM_001039570	83999	Hs.229335	NM_032045	ENSG00000183762	KREMEN1	KREMEN|KRM1	kringle containing transmembrane protein 1	protein-coding	143.38	29.61	4.842283012	3.50E-40
chr22-1364	chr22	29505137	29506137	+	17.9	1000	"intron (NM_032045, intron 3 of 9)"	"intron (NM_032045, intron 3 of 9)"	36571	NM_001039570	83999	Hs.229335	NM_032045	ENSG00000183762	KREMEN1	KREMEN|KRM1	kringle containing transmembrane protein 1	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr22-1371	chr22	32810762	32812499	+	28.8	1737	"intron (NM_174932, intron 14 of 14)"	MIRb|SINE|MIR	-3356	NM_014306	51493	Hs.474643	NM_014306	ENSG00000100220	RTCB	C22orf28|DJ149A16.6|FAAP|HSPC117	"RNA 2',3'-cyclic phosphate and 5'-OH ligase"	protein-coding	28.8	5.82	4.948453608	3.50E-09
chr22-1375	chr22	33404455	33405455	+	17.3	1000	"intron (NM_001135774, intron 1 of 13)"	L1ME2|LINE|L1	-2149	NM_003490	8224	Hs.608750	NM_003490	ENSG00000185666	SYN3	-	synapsin III	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr22-1376	chr22	33457050	33460996	+	63.4	3946	Intergenic	MIRb|SINE|MIR	-4646	NM_001135774	8224	Hs.608750	NM_003490	ENSG00000185666	SYN3	-	synapsin III	protein-coding	63.37	15.05	4.210631229	4.63E-16
chr22-1379	chr22	34976957	34977957	+	17.9	1000	Intergenic	L1MC3|LINE|L1	416448	NR_138042	101926957	Hs.722607	NR_138042		ISX-AS1	-	ISX antisense RNA 1	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr22-1380	chr22	35909958	35911243	+	22.4	1285	Intergenic	Intergenic	-26752	NM_014310	23551	Hs.474711	NM_014310	ENSG00000100302	RASD2	MGC:4834|Rhes|TEM2	RASD family member 2	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr22-1399	chr22	37416248	37417248	+	17.3	1000	promoter-TSS (NM_001270483)	promoter-TSS (NM_001270483)	-524	NM_001270483	7263	Hs.474783	NM_003312	ENSG00000128311	TST	RDS	thiosulfate sulfurtransferase	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr22-1402	chr22	37720028	37723047	+	65.3	3019	Intergenic	Intergenic	29342	NR_110515	100506271	Hs.220558	NR_110515	ENSG00000237862	LOC100506271	-	uncharacterized LOC100506271	ncRNA	65.29	10.68	6.11329588	1.76E-23
chr22-1406	chr22	37780898	37781898	+	18.6	1000	"intron (NM_052906, intron 2 of 2)"	"intron (NM_052906, intron 2 of 2)"	-30519	NR_110515	100506271	Hs.220558	NR_110515	ENSG00000237862	LOC100506271	-	uncharacterized LOC100506271	ncRNA	18.56	2.43	7.637860082	1.53E-08
chr22-1408	chr22	37803069	37806287	+	62.7	3218	"intron (NM_052906, intron 2 of 2)"	"intron (NM_052906, intron 2 of 2)"	18827	NM_052906	114794	Hs.344170	NM_052906	ENSG00000166897	ELFN2	LRRC62|PPP1R29	extracellular leucine rich repeat and fibronectin type III domain containing 2	protein-coding	62.73	7.77	8.073359073	1.00E-27
chr22-1416	chr22	39348366	39349366	+	17.3	1000	Intergenic	Intergenic	-4661	NM_145699	200315	Hs.226307	NM_145699	ENSG00000128383	APOBEC3A	A3A|ARP3|PHRBN|bK150C2.1	apolipoprotein B mRNA editing enzyme catalytic subunit 3A	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr22-142	chr22	44146093	44149235	+	71.7	3142	"intron (NM_198856, intron 4 of 29)"	"intron (NM_198856, intron 4 of 29)"	60553	NM_022785	64800	Hs.658996	NM_022785	ENSG00000186976	EFCAB6	DJBP|HSCBCIP1|dJ185D5.1	EF-hand calcium binding domain 6	protein-coding	71.69	13.11	5.468344775	2.28E-23
chr22-1423	chr22	39645652	39654143	+	117.1	8491	Intergenic	Intergenic	-8837	NM_002608	5155	Hs.1976	NM_002608	ENSG00000100311	PDGFB	IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis	platelet derived growth factor subunit B	protein-coding	117.13	25.24	4.640649762	1.74E-31
chr22-1427	chr22	39764329	39765867	+	27.5	1538	"intron (NM_145738, intron 1 of 3)"	MIRb|SINE|MIR	4923	NM_145738	9145	Hs.216226	NM_004711	ENSG00000100321	SYNGR1	-	synaptogyrin 1	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr22-1431	chr22	40095982	40097702	+	29.4	1720	Intergenic	MLT1J2|LTR|ERVL-MaLR	130084	NM_001003406	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding	29.44	5.82	5.058419244	6.85E-10
chr22-1433	chr22	40179487	40180487	+	18.6	1000	"intron (NM_152512, intron 5 of 6)"	L1MA4|LINE|L1	109807	NM_152512	150350	Hs.474869	NM_152512	ENSG00000176177	ENTHD1	CACNA1I|dJ370M22.3	ENTH domain containing 1	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr22-1434	chr22	42174453	42175453	+	18.6	1000	"intron (NM_152513, intron 22 of 30)"	"intron (NM_152513, intron 22 of 30)"	-21673	NM_001304797	79879	Hs.474991	NM_024821	ENSG00000100147	CCDC134	-	coiled-coil domain containing 134	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr22-1435	chr22	42306181	42307875	+	34.6	1694	"intron (NM_001207020, intron 2 of 3)"	CpG-17902	3643	NM_001207020	440829	Hs.526704	NM_001207020	ENSG00000234965	SHISA8	C22orf17|Orf26	shisa family member 8	protein-coding	34.56	2.91	11.87628866	4.47E-20
chr22-1437	chr22	42776455	42779216	+	52.5	2761	"3' UTR (NM_001318323, exon 5 of 5)"	"3' UTR (NM_001318323, exon 5 of 5)"	-12621	NR_120596	102723775	Hs.335413	NR_120595	ENSG00000229891	LINC01315	lnc-C22orf32-1	long intergenic non-protein coding RNA 1315	ncRNA	52.49	9.71	5.40576725	2.20E-17
chr22-1441	chr22	42885860	42886860	+	19.2	1000	Intergenic	Intergenic	-10225	NR_027786	94009	Hs.360940	NM_170694	ENSG00000172250	SERHL	BK126B4.1|BK126B4.2|HS126B42|dJ222E13.1	serine hydrolase-like (pseudogene)	pseudo	19.2	2.43	7.901234568	1.91E-09
chr22-1449	chr22	43764260	43765787	+	28.8	1527	Intergenic	AluSp|SINE|Alu	-25629	NM_173050	80274	Hs.133995	NM_173050	ENSG00000159307	SCUBE1	-	"signal peptide, CUB domain and EGF like domain containing 1"	protein-coding	28.8	6.8	4.235294118	5.07E-08
chr22-1453	chr22	43950373	43951627	+	19.2	1254	"intron (NM_198856, intron 24 of 29)"	"intron (NM_198856, intron 24 of 29)"	38866	NR_046563	100874197	Hs.627997	NR_046563		EFCAB6-AS1	-	EFCAB6 antisense RNA 1	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr22-1454	chr22	43993708	43996141	+	45.4	2433	"intron (NM_198856, intron 21 of 29)"	"intron (NM_198856, intron 21 of 29)"	82790	NR_046563	100874197	Hs.627997	NR_046563		EFCAB6-AS1	-	EFCAB6 antisense RNA 1	ncRNA	45.45	8.74	5.200228833	2.02E-14
chr22-1455	chr22	44001864	44002864	+	17.9	1000	"intron (NM_198856, intron 20 of 29)"	MIR|SINE|MIR	90230	NR_046563	100874197	Hs.627997	NR_046563		EFCAB6-AS1	-	EFCAB6 antisense RNA 1	ncRNA	17.92	2.43	7.374485597	1.53E-08
chr22-1463	chr22	44493466	44494717	+	19.8	1251	"intron (NM_001003828, intron 3 of 13)"	"intron (NM_001003828, intron 3 of 13)"	29094	NM_001243385	29780	Hs.475074	NM_013327	ENSG00000188677	PARVB	CGI-56	parvin beta	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr22-1464	chr22	44683776	44686591	+	45.4	2815	"intron (NM_001099294, intron 3 of 4)"	"intron (NM_001099294, intron 3 of 4)"	23548	NM_001099294	85352	Hs.6829	NM_001099294	ENSG00000138944	KIAA1644	-	KIAA1644	protein-coding	45.45	7.77	5.849420849	6.82E-16
chr22-1466	chr22	44812223	44813223	+	19.2	1000	Intergenic	L1MEf|LINE|L1	-26484	NR_109966	101927526	Hs.339290	NR_109966	ENSG00000232655	LINC01656	-	long intergenic non-protein coding RNA 1656	ncRNA	19.2	3.4	5.647058824	1.47E-07
chr22-1472	chr22	45150554	45151804	+	22.4	1250	"intron (NM_181335, intron 1 of 11)"	"intron (NM_181335, intron 1 of 11)"	2741	NM_001017526	23779	Hs.102336	NM_181335	ENSG00000241484	ARHGAP8	BPGAP1|PP610	Rho GTPase activating protein 8	protein-coding	22.4	2.43	9.218106996	2.49E-11
chr22-1476	chr22	45819609	45820861	+	21.1	1252	"intron (NM_015653, intron 5 of 7)"	MIRb|SINE|MIR	10663	NM_015653	26150	Hs.475110	NM_015653	ENSG00000128408	RIBC2	C22orf11|TRIB	RIB43A domain with coiled-coils 2	protein-coding	21.12	0.97	21.77319588	2.68E-16
chr22-1478	chr22	45826587	45827587	+	18.6	1000	"intron (NM_015653, intron 7 of 7)"	"intron (NM_015653, intron 7 of 7)"	17515	NM_015653	26150	Hs.475110	NM_015653	ENSG00000128408	RIBC2	C22orf11|TRIB	RIB43A domain with coiled-coils 2	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr22-1479	chr22	45829322	45831030	+	28.8	1708	Intergenic	Intergenic	20604	NM_015653	26150	Hs.475110	NM_015653	ENSG00000128408	RIBC2	C22orf11|TRIB	RIB43A domain with coiled-coils 2	protein-coding	28.8	4.85	5.93814433	1.30E-10
chr22-1480	chr22	45908884	45912316	+	61.4	3432	"intron (NM_006486, intron 1 of 16)"	"intron (NM_006486, intron 1 of 16)"	11881	NM_001996	2192	Hs.24601	NM_001996	ENSG00000077942	FBLN1	FBLN|FIBL1	fibulin 1	protein-coding	61.45	10.68	5.753745318	3.83E-21
chr22-1483	chr22	45941461	45942719	+	24.3	1258	"intron (NM_006486, intron 11 of 16)"	AluSg|SINE|Alu	43371	NM_001996	2192	Hs.24601	NM_001996	ENSG00000077942	FBLN1	FBLN|FIBL1	fibulin 1	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr22-1486	chr22	46276413	46277413	+	17.3	1000	Intergenic	CpG	96095	NM_058238	7477	Hs.512714	NM_058238	ENSG00000188064	WNT7B	-	Wnt family member 7B	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr22-1492	chr22	46385099	46386099	+	19.2	1000	Intergenic	Intergenic	-12591	NM_058238	7477	Hs.512714	NM_058238	ENSG00000188064	WNT7B	-	Wnt family member 7B	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr22-1498	chr22	47669857	47672450	+	39	2593	Intergenic	HAL1|LINE|L1	-70168	NR_144462	339685	Hs.434351	NR_038922		LOC339685	-	uncharacterized LOC339685	ncRNA	39.04	9.71	4.020597322	6.29E-10
chr22-1503	chr22	48235171	48240346	+	74.2	5175	"intron (NR_122046, intron 8 of 8)"	MER31B|LTR|ERV1	210335	NR_122046	284930	Hs.407567	NR_122046	ENSG00000224271	LOC284930	-	uncharacterized LOC284930	ncRNA	74.25	12.62	5.883518225	1.17E-25
chr22-1504	chr22	48411631	48413036	+	25	1405	Intergenic	Intergenic	-257843	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	24.96	4.85	5.146391753	2.27E-08
chr22-1505	chr22	48499627	48501751	+	39	2124	Intergenic	MER58B|DNA|hAT-Charlie	-169487	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	39.04	6.8	5.741176471	1.26E-13
chr22-1510	chr22	48799419	48800419	+	18.6	1000	Intergenic	Intergenic	-85353	NM_001082967	25817	Hs.436854	NM_015381	ENSG00000219438	FAM19A5	QLLK5208|TAFA-5|TAFA5|UNQ5208	"family with sequence similarity 19 member A5, C-C motif chemokine like"	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr22-1513	chr22	48917443	48918711	+	19.8	1268	"intron (NM_001082967, intron 1 of 3)"	"intron (NM_001082967, intron 1 of 3)"	25122	NR_038917	284933	Hs.159057	NR_038917	ENSG00000281732	LOC284933	-	uncharacterized LOC284933	ncRNA	19.84	2.43	8.164609053	1.91E-09
chr22-1514	chr22	48927483	48928483	+	17.3	1000	"intron (NM_001082967, intron 1 of 3)"	"intron (NM_001082967, intron 1 of 3)"	15216	NR_038917	284933	Hs.159057	NR_038917	ENSG00000281732	LOC284933	-	uncharacterized LOC284933	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr22-1520	chr22	49406146	49409313	+	53.8	3167	Intergenic	Intergenic	145147	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	53.77	7.77	6.92020592	1.47E-21
chr22-1523	chr22	49420125	49421387	+	21.1	1262	Intergenic	Intergenic	158174	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	21.12	3.4	6.211764706	2.41E-08
chr22-1524	chr22	49495437	49497524	+	44.8	2087	Intergenic	Intergenic	233898	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	44.81	5.82	7.699312715	1.25E-19
chr22-1531	chr22	49656279	49657537	+	21.1	1258	Intergenic	Intergenic	280206	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	21.12	4.37	4.832951945	6.64E-07
chr22-1535	chr22	49699017	49700703	+	33.9	1686	Intergenic	Intergenic	237254	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	33.92	5.34	6.352059925	6.04E-13
chr22-1548	chr22	50744613	50745883	+	24.3	1270	"intron (NM_012401, intron 1 of 36)"	"intron (NM_012401, intron 1 of 36)"	753	NM_012401	23654	Hs.3989	NM_012401	ENSG00000196576	PLXNB2	MM1|Nbla00445|PLEXB2|dJ402G11.3	plexin B2	protein-coding	24.32	2.43	10.00823045	2.59E-13
chr22-1549	chr22	51095849	51096849	+	17.9	1000	Intergenic	LTR67B|LTR|ERVL	-16721	NM_033517	85358	Hs.149035	NM_033517	ENSG00000251322	SHANK3	DEL22q13.3|PROSAP2|PSAP2|SCZD15|SPANK-2	SH3 and multiple ankyrin repeat domains 3	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr22-1558	chr22	19006237	19007497	+	19.8	1260	"non-coding (NR_024159, exon 1 of 1)"	"non-coding (NR_024159, exon 1 of 1)"	1520	NR_024159	25787	Hs.106311	NR_024159	ENSG00000273032	DGCR9	DGS-A	DiGeorge syndrome critical region gene 9 (non-protein coding)	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr22-1559	chr22	19154986	19158645	+	69.8	3659	Intergenic	Intergenic	-2404	NR_103767	100652736	Hs.572896	NR_103767		LINC01311	-	long intergenic non-protein coding RNA 1311	ncRNA	69.77	16.5	4.228484848	1.29E-17
chr22-1562	chr22	19588411	19589411	+	17.9	1000	Intergenic	AluY|SINE|Alu	-34549	NR_024381	150185	Hs.719752	NR_024381		LINC00895	-	long intergenic non-protein coding RNA 895	ncRNA	17.92	0.97	18.4742268	1.12E-13
chr22-1563	chr22	19650505	19656985	+	105	6480	Intergenic	Intergenic	-48242	NM_002688	5413	Hs.728762	NM_002688	ENSG00000184702	5-Sep	CDCREL|CDCREL-1|CDCREL1|H5|HCDCREL-1|PNUTL1	septin 5	protein-coding	104.97	23.3	4.505150215	7.10E-28
chr22-1572	chr22	20002110	20006499	+	106.9	4389	promoter-TSS (NM_001322174)	promoter-TSS (NM_001322174)	5	NM_001670	421	Hs.713616	NM_001670	ENSG00000099889	ARVCF	-	armadillo repeat gene deleted in velocardiofacial syndrome	protein-coding	106.89	16.02	6.672284644	1.31E-39
chr22-1578	chr22	20961605	20966607	+	69.8	5002	Intergenic	Intergenic	-79737	NR_024592	266697	Hs.558711	NR_024592		POM121L4P	-	"POM121 transmembrane nucleoporin like 4, pseudogene"	pseudo	69.77	16.5	4.228484848	1.29E-17
chr22-1586	chr22	22568759	22569759	+	17.9	1000	Intergenic	Intergenic	-29933	NM_001303509	7441	Hs.247979	NM_007128	ENSG00000169575	VPREB1	CD179a|IGI|IGVPB|VPREB	pre-B lymphocyte 1	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr22-1589	chr22	22726074	22730517	+	74.9	4443	Intergenic	L1MC5|LINE|L1	75832	NR_027293	96610	Hs.449601	NM_080926	ENSG00000236850	BMS1P20	IGL|IGLV|IGLV1	"BMS1, ribosome biogenesis factor pseudogene 20"	pseudo	74.89	14.08	5.318892045	2.15E-23
chr22-1593	chr22	23084310	23085575	+	20.5	1265	Intergenic	L1M2|LINE|L1	-80328	NR_030755	723778		NR_030755	ENSG00000278196	MIR650	MIRN650|hsa-mir-650	microRNA 650	ncRNA	20.48	4.85	4.222680412	2.52E-06
chr22-1595	chr22	23200610	23201610	+	17.3	1000	Intergenic	Intergenic	-27337	NR_049835	100847006		NR_049835	ENSG00000264824	MIR5571	-	microRNA 5571	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr22-1599	chr22	23693567	23694567	+	17.9	1000	Intergenic	Intergenic	30246	NR_037839	649264	Hs.600549	NR_037839		CES5AP1	-	carboxylesterase 5A pseudogene 1	pseudo	17.92	3.4	5.270588235	8.42E-07
chr22-1601	chr22	23907516	23908800	+	23.7	1284	Intergenic	MIRb|SINE|MIR	14337	NM_152855	3543	Hs.348935	NM_020070	ENSG00000128322	IGLL1	14.1|AGM2|CD179b|IGL1|IGL5|IGLJ14.1|IGLL|IGO|IGVPB|VPREB2	immunoglobulin lambda like polypeptide 1	protein-coding	23.68	2.43	9.744855967	2.61E-12
chr22-1605	chr22	25376730	25377730	+	16.6	1000	Intergenic	L2b|LINE|L2	-41916	NM_001001663	255349	Hs.329040	NM_001001663	ENSG00000206069	TMEM211	bA9F11.1	transmembrane protein 211	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr22-1609	chr22	25549494	25550494	+	16.6	1000	"intron (NM_001145206, intron 4 of 10)"	"intron (NM_001145206, intron 4 of 10)"	-41335	NR_038941	100128531	Hs.662126	NR_038941	ENSG00000203280	LOC100128531	-	uncharacterized LOC100128531	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr22-1611	chr22	25680423	25682020	+	28.2	1597	Intergenic	AluJr|SINE|Alu	-33003	NR_029395	91353	Hs.651077	NM_001013618		IGLL3P	16.1|IGLL3	"immunoglobulin lambda like polypeptide 3, pseudogene"	pseudo	28.16	5.34	5.27340824	7.39E-10
chr22-1613	chr22	25786149	25789414	+	58.9	3265	Intergenic	Intergenic	-10237	NM_001135772	91355	Hs.634058	NM_182492	ENSG00000100068	LRP5L	-	LDL receptor related protein 5 like	protein-coding	58.89	4.37	13.47597254	2.14E-35
chr22-1622	chr22	26580219	26581219	+	16.6	1000	"intron (NM_001184773, intron 1 of 16)"	"intron (NM_001184773, intron 1 of 16)"	15279	NM_001184777	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr22-1628	chr22	27759141	27760399	+	21.8	1258	Intergenic	L1MC1|LINE|L1	53158	NR_134581	100507657	Hs.537371	NR_134581	ENSG00000226741	LOC100507657	-	uncharacterized LOC100507657	ncRNA	21.76	5.34	4.074906367	1.97E-06
chr22-1629	chr22	27816110	27817373	+	21.1	1263	Intergenic	Intergenic	110129	NR_134581	100507657	Hs.537371	NR_134581	ENSG00000226741	LOC100507657	-	uncharacterized LOC100507657	ncRNA	21.12	4.85	4.354639175	2.52E-06
chr22-1632	chr22	27945149	27946149	+	18.6	1000	Intergenic	AluSc|SINE|Alu	239037	NR_134581	100507657	Hs.537371	NR_134581	ENSG00000226741	LOC100507657	-	uncharacterized LOC100507657	ncRNA	18.56	4.37	4.247139588	1.41E-05
chr22-1633	chr22	27972984	27977650	+	73	4666	Intergenic	Intergenic	222169	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	"MN1 proto-oncogene, transcriptional regulator"	protein-coding	72.97	15.05	4.848504983	2.43E-21
chr22-1636	chr22	28144910	28145910	+	16.6	1000	"3' UTR (NM_002430, exon 2 of 2)"	"3' UTR (NM_002430, exon 2 of 2)"	52076	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	"MN1 proto-oncogene, transcriptional regulator"	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr22-1639	chr22	28196496	28198099	+	25.6	1603	"5' UTR (NM_002430, exon 1 of 2)"	"5' UTR (NM_002430, exon 1 of 2)"	189	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	"MN1 proto-oncogene, transcriptional regulator"	protein-coding	25.6	0.49	52.24489796	1.06E-27
chr22-1647	chr22	29293635	29294635	+	17.9	1000	"intron (NM_001206998, intron 1 of 8)"	AluSx3|SINE|Alu	14380	NM_001206998	84133	Hs.604200	NM_032173	ENSG00000183579	ZNRF3	BK747E2.3|RNF203	zinc and ring finger 3	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr22-165	chr22	45161755	45162755	+	25.6	1000	"intron (NM_181335, intron 1 of 11)"	"intron (NM_181335, intron 1 of 11)"	13817	NM_001017526	23779	Hs.102336	NM_181335	ENSG00000241484	ARHGAP8	BPGAP1|PP610	Rho GTPase activating protein 8	protein-coding	25.6	4.85	5.278350515	4.26E-09
chr22-1650	chr22	29327413	29328413	+	17.9	1000	"intron (NM_032173, intron 1 of 8)"	"intron (NM_032173, intron 1 of 8)"	14536	NM_032173	84133	Hs.604200	NM_032173	ENSG00000183579	ZNRF3	BK747E2.3|RNF203	zinc and ring finger 3	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr22-1669	chr22	32737205	32738205	+	17.9	1000	Intergenic	L2a|LINE|L2	-13167	NM_006604	10738	Hs.558455	NM_006604	ENSG00000128276	RFPL3	-	ret finger protein like 3	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr22-1670	chr22	32837560	32840380	+	43.5	2820	"intron (NM_174932, intron 5 of 14)"	"intron (NM_174932, intron 5 of 14)"	14403	NM_174932	254240	Hs.372939	NM_174932	ENSG00000184459	BPIFC	BPIL2	BPI fold containing family C	protein-coding	43.53	10.19	4.271835132	6.58E-12
chr22-1672	chr22	33030632	33032810	+	33.9	2178	"intron (NM_001135774, intron 6 of 13)"	"intron (NM_001135774, intron 6 of 13)"	160497	NM_001033024	25793	Hs.5912	NM_012179	ENSG00000100225	FBXO7	FBX|FBX07|FBX7|PARK15|PKPS	F-box protein 7	protein-coding	33.92	7.77	4.365508366	1.68E-09
chr22-1675	chr22	33355797	33356797	+	17.3	1000	"intron (NM_001135774, intron 3 of 13)"	MER74A|LTR|ERVL	46509	NM_133633	8224	Hs.608750	NM_003490	ENSG00000185666	SYN3	-	synapsin III	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr22-1682	chr22	36017132	36018840	+	27.5	1708	"intron (NM_203377, intron 1 of 3)"	"intron (NM_203377, intron 1 of 3)"	1415	NM_203377	4151	Hs.517586	NM_005368	ENSG00000198125	MB	PVALB|myoglobgin	myoglobin	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr22-1685	chr22	36423425	36424712	+	20.5	1287	"intron (NM_001082578, intron 1 of 13)"	"intron (NM_001082578, intron 1 of 13)"	517	NM_001082579	23543	Hs.282998	NM_014309	ENSG00000100320	RBFOX2	FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh	"RNA binding protein, fox-1 homolog 2"	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr22-169	chr22	48987251	48990892	+	58.2	3641	"intron (NM_015381, intron 1 of 3)"	"intron (NM_015381, intron 1 of 3)"	16953	NM_015381	25817	Hs.436854	NM_015381	ENSG00000219438	FAM19A5	QLLK5208|TAFA-5|TAFA5|UNQ5208	"family with sequence similarity 19 member A5, C-C motif chemokine like"	protein-coding	58.25	9.71	5.998970134	1.99E-20
chr22-1697	chr22	37358414	37359414	+	17.9	1000	Intergenic	Intergenic	-2375	NR_038954	100506241	Hs.640023	NR_038954	ENSG00000215403	LL22NC01-81G9.3	-	uncharacterized protein FLJ39582-like	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr22-1702	chr22	37713895	37715671	+	28.8	1776	Intergenic	MIRb|SINE|MIR	36096	NR_110515	100506271	Hs.220558	NR_110515	ENSG00000237862	LOC100506271	-	uncharacterized LOC100506271	ncRNA	28.8	4.85	5.93814433	1.30E-10
chr22-1715	chr22	38199038	38203245	+	88.3	4207	promoter-TSS (NM_005318)	promoter-TSS (NM_005318)	27	NM_005318	3005	Hs.745024	NM_005318	ENSG00000189060	H1F0	H10|H1FV	H1 histone family member 0	protein-coding	88.33	14.56	6.066620879	5.80E-31
chr22-1716	chr22	38732034	38733034	+	17.3	1000	"intron (NM_001289912, intron 5 of 14)"	"intron (NM_001289912, intron 5 of 14)"	-18445	NM_001894	1454	Hs.474833	NM_001894	ENSG00000213923	CSNK1E	CKIepsilon|HCKIE	casein kinase 1 epsilon	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr22-1717	chr22	38837530	38840444	+	44.2	2914	"intron (NM_152868, intron 1 of 1)"	AluJb|SINE|Alu	1046	NM_004981	3761	Hs.32505	NM_004981	ENSG00000168135	KCNJ4	HIR|HIRK2|HRK1|IRK-3|IRK3|Kir2.3	potassium voltage-gated channel subfamily J member 4	protein-coding	44.17	10.68	4.13576779	2.22E-11
chr22-1720	chr22	39213040	39214310	+	20.5	1270	TTS (NM_014293)	TTS (NM_014293)	-23514	NM_005740	10126	Hs.632766	NM_005740	ENSG00000100246	DNAL4	MRMV3|PIG27	dynein axonemal light chain 4	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr22-1734	chr22	39656299	39659214	+	50.6	2915	Intergenic	MLT1G1|LTR|ERVL-MaLR	-16696	NM_002608	5155	Hs.1976	NM_002608	ENSG00000100311	PDGFB	IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis	platelet derived growth factor subunit B	protein-coding	50.57	9.71	5.208032956	6.34E-16
chr22-1738	chr22	40007025	40008025	+	17.9	1000	"intron (NM_021096, intron 3 of 36)"	"intron (NM_021096, intron 3 of 36)"	40767	NM_001003406	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr22-1739	chr22	40019631	40020631	+	17.3	1000	"intron (NM_021096, intron 4 of 36)"	(TG)n|Simple_repeat|Simple_repeat	53373	NM_001003406	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr22-1742	chr22	40079898	40080898	+	17.9	1000	"exon (NM_001003406, exon 35 of 36)"	"exon (NM_001003406, exon 35 of 36)"	113640	NM_001003406	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr22-1754	chr22	43697272	43704971	+	144.7	7699	"intron (NM_173050, intron 3 of 21)"	"intron (NM_173050, intron 3 of 21)"	29173	NR_134582	101927447	Hs.621227	NR_134582	ENSG00000203527	LOC101927447	-	uncharacterized LOC101927447	ncRNA	144.66	32.52	4.448339483	3.03E-37
chr22-1756	chr22	43710021	43711021	+	20.5	1000	"intron (NM_173050, intron 3 of 21)"	MER115|DNA|hAT-Tip100	28873	NM_173050	80274	Hs.133995	NM_173050	ENSG00000159307	SCUBE1	-	"signal peptide, CUB domain and EGF like domain containing 1"	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr22-1759	chr22	43772135	43774834	+	46.7	2699	Intergenic	Intergenic	-34090	NM_173050	80274	Hs.133995	NM_173050	ENSG00000159307	SCUBE1	-	"signal peptide, CUB domain and EGF like domain containing 1"	protein-coding	46.73	7.28	6.418956044	1.62E-17
chr22-1764	chr22	43825849	43827472	+	27.5	1623	"intron (NM_001044370, intron 2 of 6)"	"intron (NM_001044370, intron 2 of 6)"	18640	NM_001044370	758	Hs.159538	NM_001044370	ENSG00000186732	MPPED1	239AB|C22orf1|FAM1A	metallophosphoesterase domain containing 1	protein-coding	27.52	5.82	4.728522337	1.71E-08
chr22-1773	chr22	44446352	44447641	+	22.4	1289	"intron (NM_001243386, intron 1 of 11)"	"intron (NM_001243386, intron 1 of 11)"	-18001	NM_001243385	29780	Hs.475074	NM_013327	ENSG00000188677	PARVB	CGI-56	parvin beta	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr22-1779	chr22	44803461	44809452	+	87.1	5991	Intergenic	Intergenic	-32751	NR_109966	101927526	Hs.339290	NR_109966	ENSG00000232655	LINC01656	-	long intergenic non-protein coding RNA 1656	ncRNA	87.05	10.68	8.150749064	4.82E-38
chr22-1780	chr22	44837221	44840039	+	43.5	2818	promoter-TSS (NR_109966)	promoter-TSS (NR_109966)	-577	NR_109966	101927526	Hs.339290	NR_109966	ENSG00000232655	LINC01656	-	long intergenic non-protein coding RNA 1656	ncRNA	43.53	5.34	8.151685393	7.25E-20
chr22-1789	chr22	45974616	45976445	+	30.7	1829	"intron (NM_006486, intron 16 of 16)"	"intron (NM_006486, intron 16 of 16)"	25997	NR_131244	100506737	Hs.517692	NR_131244	ENSG00000238120	LINC01589	TCONS_00029353	long intergenic non-protein coding RNA 1589	ncRNA	30.72	5.82	5.278350515	1.29E-10
chr22-1793	chr22	46353009	46355661	+	46.1	2652	"intron (NM_058238, intron 1 of 3)"	"intron (NM_058238, intron 1 of 3)"	18673	NM_058238	7477	Hs.512714	NM_058238	ENSG00000188064	WNT7B	-	Wnt family member 7B	protein-coding	46.09	10.19	4.523061825	3.26E-13
chr22-180	chr22	23453970	23455934	+	42.2	1964	"intron (NM_002073, intron 2 of 2)"	"intron (NM_002073, intron 2 of 2)"	29289	NM_014433	27156	Hs.526920	NM_014433	ENSG00000100218	RSPH14	RTDR1	radial spoke head 14 homolog	protein-coding	42.25	4.85	8.711340206	3.69E-20
chr22-1801	chr22	46542867	46545750	+	44.2	2883	Intergenic	Intergenic	-2191	NM_005036	5465	Hs.103110	NM_005036	ENSG00000186951	PPARA	NR1C1|PPAR|PPARalpha|hPPAR	peroxisome proliferator activated receptor alpha	protein-coding	44.17	6.8	6.495588235	8.79E-17
chr22-1804	chr22	46937127	46938127	+	17.3	1000	Intergenic	Intergenic	-4560	NM_014246	9620	Hs.252387	NM_014246	ENSG00000075275	CELSR1	ADGRC1|CDHF9|FMI2|HFMI2|ME2	cadherin EGF LAG seven-pass G-type receptor 1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr22-1808	chr22	48208395	48209395	+	16.6	1000	"intron (NR_122046, intron 8 of 8)"	"intron (NR_122046, intron 8 of 8)"	181472	NR_122046	284930	Hs.407567	NR_122046	ENSG00000224271	LOC284930	-	uncharacterized LOC284930	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr22-1811	chr22	48274024	48275024	+	18.6	1000	Intergenic	AluSc|SINE|Alu	247101	NR_122046	284930	Hs.407567	NR_122046	ENSG00000224271	LOC284930	-	uncharacterized LOC284930	ncRNA	18.56	4.37	4.247139588	1.41E-05
chr22-1816	chr22	48975125	48976652	+	26.9	1527	"intron (NM_015381, intron 1 of 3)"	"intron (NM_015381, intron 1 of 3)"	3770	NM_015381	25817	Hs.436854	NM_015381	ENSG00000219438	FAM19A5	QLLK5208|TAFA-5|TAFA5|UNQ5208	"family with sequence similarity 19 member A5, C-C motif chemokine like"	protein-coding	26.88	2.91	9.237113402	7.03E-14
chr22-1824	chr22	49415218	49418169	+	42.9	2951	Intergenic	(TA)n|Simple_repeat|Simple_repeat	154111	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	42.89	6.8	6.307352941	5.66E-16
chr22-1826	chr22	49526891	49527891	+	17.9	1000	Intergenic	AluSx1|SINE|Alu	264809	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr22-1843	chr22	50014065	50017295	+	62.1	3230	"intron (NM_001289922, intron 5 of 5)"	"intron (NM_001289922, intron 5 of 5)"	35510	NR_110522	348645	Hs.133159	NM_198851	ENSG00000188511	C22orf34	-	chromosome 22 open reading frame 34	protein-coding	62.09	7.77	7.990990991	8.12E-27
chr22-1845	chr22	50111318	50112318	+	18.6	1000	Intergenic	Intergenic	-60628	NR_110523	348645	Hs.133159	NM_198851	ENSG00000188511	C22orf34	-	chromosome 22 open reading frame 34	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr22-1846	chr22	50242643	50243968	+	21.8	1325	Intergenic	CpG	-4192	NM_014838	9889	Hs.475208	NM_014838	ENSG00000100426	ZBED4	-	zinc finger BED-type containing 4	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr22-1847	chr22	50468521	50470083	+	26.9	1562	Intergenic	CpG	-18247	NM_001001694	400935	Hs.526712	NM_001001694	ENSG00000188263	IL17REL	-	interleukin 17 receptor E like	protein-coding	26.88	5.82	4.618556701	1.71E-08
chr22-1850	chr22	51073934	51074934	+	18.6	1000	Intergenic	THE1C|LTR|ERVL-MaLR	-7833	NM_001085427	410	Hs.88251	NM_000487	ENSG00000100299	ARSA	MLD	arylsulfatase A	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr22-1851	chr22	51173990	51174990	+	17.9	1000	"non-coding (NR_134637, exon 2 of 2)"	"non-coding (NR_134637, exon 2 of 2)"	2107	NR_134637	105373100	Hs.475243	NR_134637	ENSG00000225929	LOC105373100	-	uncharacterized LOC105373100	ncRNA	17.92	2.43	7.374485597	1.53E-08
chr22-1853	chr22	17722250	17723250	+	17.3	1000	Intergenic	Intergenic	-20006	NM_001282227	51816	Hs.170310	NM_017424	ENSG00000093072	CECR1	ADA2|ADGF|IDGFL|PAN|SNEDS	"cat eye syndrome chromosome region, candidate 1"	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr22-1859	chr22	17936247	17937247	+	17.9	1000	"intron (NM_001290046, intron 1 of 18)"	L1MD2|LINE|L1	-19881	NM_001290047	27443	Hs.231895	NM_031413	ENSG00000099954	CECR2	-	"CECR2, histone acetyl-lysine reader"	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr22-1863	chr22	17992244	17993244	+	17.3	1000	"intron (NM_001290046, intron 8 of 18)"	"intron (NM_001290046, intron 8 of 18)"	36116	NM_001290047	27443	Hs.231895	NM_031413	ENSG00000099954	CECR2	-	"CECR2, histone acetyl-lysine reader"	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr22-1870	chr22	19596770	19597770	+	16.6	1000	Intergenic	Intergenic	-42908	NR_024381	150185	Hs.719752	NR_024381		LINC00895	-	long intergenic non-protein coding RNA 895	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr22-1876	chr22	19697450	19698772	+	22.4	1322	Intergenic	Intergenic	-3876	NM_002688	5413	Hs.728762	NM_002688	ENSG00000184702	5-Sep	CDCREL|CDCREL-1|CDCREL1|H5|HCDCREL-1|PNUTL1	septin 5	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr22-1877	chr22	19706399	19707399	+	16.6	1000	"intron (NM_001009939, intron 1 of 10)"	"intron (NM_001009939, intron 1 of 10)"	907	NR_037612	100526833	Hs.283743	NR_037611	ENSG00000184702	SEPT5-GP1BB	-	SEPT5-GP1BB readthrough	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr22-188	chr22	30640856	30643814	+	60.2	2958	"intron (NM_002309, intron 1 of 2)"	GA-rich|Low_complexity|Low_complexity	505	NM_001257135	3976	Hs.2250	NM_002309	ENSG00000128342	LIF	CDF|DIA|HILDA|MLPLI	leukemia inhibitory factor	protein-coding	60.17	12.13	4.960428689	2.97E-18
chr22-1881	chr22	20166888	20169850	+	49.3	2962	Intergenic	Intergenic	24072	NR_038460	284865	Hs.638498	NR_038460	ENSG00000249923	LOC284865	-	uncharacterized LOC284865	ncRNA	49.29	3.88	12.70360825	2.05E-28
chr22-1888	chr22	20968563	20969563	+	17.9	1000	Intergenic	AluSg4|SINE|Alu	-74780	NR_024592	266697	Hs.558711	NR_024592		POM121L4P	-	"POM121 transmembrane nucleoporin like 4, pseudogene"	pseudo	17.92	2.91	6.158075601	1.38E-07
chr22-190	chr22	36931583	36935374	+	89.6	3791	Intergenic	Intergenic	-8201	NM_003753	8664	Hs.55682	NM_003753	ENSG00000100353	EIF3D	EIF3S7|eIF3-p66|eIF3-zeta	eukaryotic translation initiation factor 3 subunit D	protein-coding	89.61	11.16	8.029569892	1.07E-38
chr22-1901	chr22	22802542	22803542	+	17.3	1000	Intergenic	Intergenic	60463	NR_130642	140883	Hs.43834	NM_080764	ENSG00000275004	ZNF280B	5'OY11.1|D87009.C22.3|SUHW2|ZNF279|ZNF632	zinc finger protein 280B	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr22-1912	chr22	23329797	23330797	+	17.9	1000	Intergenic	Intergenic	-82372	NM_002073	2781	Hs.584760	NM_002073	ENSG00000128266	GNAZ	-	G protein subunit alpha z	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr22-192	chr22	37099764	37101014	+	28.8	1250	"intron (NR_134623, intron 1 of 3)"	"intron (NR_134623, intron 1 of 3)"	468	NR_134623	105373021	Hs.401697	NR_134623		LOC105373021	-	uncharacterized LOC105373021	ncRNA	28.8	3.4	8.470588235	1.50E-13
chr22-1921	chr22	25075046	25076046	+	15.4	1000	Intergenic	REP522|Satellite|telo	-20432	NR_024593	646074	Hs.531306	NM_001025230		POM121L10P	-	"POM121 transmembrane nucleoporin like 10, pseudogene"	pseudo	15.36	2.91	5.278350515	4.98E-06
chr22-1922	chr22	25082400	25083400	+	17.3	1000	Intergenic	Intergenic	-27786	NR_024593	646074	Hs.531306	NM_001025230		POM121L10P	-	"POM121 transmembrane nucleoporin like 10, pseudogene"	pseudo	17.28	3.88	4.453608247	1.81E-05
chr22-1924	chr22	25488650	25490009	+	21.1	1359	"intron (NM_001145206, intron 4 of 10)"	MIRb|SINE|MIR	19330	NR_038941	100128531	Hs.662126	NR_038941	ENSG00000203280	LOC100128531	-	uncharacterized LOC100128531	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr22-1926	chr22	25594658	25595658	+	17.9	1000	promoter-TSS (NM_004076)	promoter-TSS (NM_004076)	-659	NM_004076	1417	Hs.533022	NM_004076	ENSG00000100053	CRYBB3	CATCN2|CRYB3|CTRCT22	crystallin beta B3	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr22-1936	chr22	26575645	26577053	+	23.7	1408	"intron (NM_001184773, intron 1 of 16)"	L2c|LINE|L2	10909	NM_001184777	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	23.68	4.37	5.418764302	2.46E-08
chr22-1940	chr22	26629789	26630789	+	17.9	1000	"intron (NM_001184773, intron 1 of 16)"	"intron (NM_001184773, intron 1 of 16)"	64849	NM_001184777	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr22-1945	chr22	27399050	27400050	+	17.9	1000	Intergenic	Intergenic	56930	NM_001318329	284898	Hs.350813	NM_001318329		LOC284898	-	uncharacterized LOC284898	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr22-1946	chr22	27448089	27449089	+	17.9	1000	"intron (NM_001318329, intron 1 of 1)"	"intron (NM_001318329, intron 1 of 1)"	7891	NM_001318329	284898	Hs.350813	NM_001318329		LOC284898	-	uncharacterized LOC284898	protein-coding	17.92	0	18.4597065	9.96E-18
chr22-1947	chr22	27691751	27693039	+	21.1	1288	Intergenic	Intergenic	-14217	NR_134581	100507657	Hs.537371	NR_134581	ENSG00000226741	LOC100507657	-	uncharacterized LOC100507657	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr22-1951	chr22	28034095	28036371	+	33.3	2276	Intergenic	CpG	162253	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	"MN1 proto-oncogene, transcriptional regulator"	protein-coding	33.28	5.82	5.718213058	4.04E-12
chr22-1952	chr22	28169920	28173124	+	51.8	3204	"intron (NM_002430, intron 1 of 1)"	"intron (NM_002430, intron 1 of 1)"	25964	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	"MN1 proto-oncogene, transcriptional regulator"	protein-coding	51.85	10.68	4.854868914	2.59E-15
chr22-1957	chr22	29242144	29243144	+	16.6	1000	Intergenic	L2c|LINE|L2	-37111	NM_001206998	84133	Hs.604200	NM_032173	ENSG00000183579	ZNRF3	BK747E2.3|RNF203	zinc and ring finger 3	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr22-1962	chr22	29346186	29347438	+	19.8	1252	"intron (NM_032173, intron 1 of 8)"	"intron (NM_032173, intron 1 of 8)"	33435	NM_032173	84133	Hs.604200	NM_032173	ENSG00000183579	ZNRF3	BK747E2.3|RNF203	zinc and ring finger 3	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr22-1965	chr22	29403526	29404526	+	17.3	1000	"intron (NM_032173, intron 2 of 8)"	AluSp|SINE|Alu	23438	NR_046851	100874123	Hs.674708	NR_046851	ENSG00000177993	ZNRF3-AS1	-	ZNRF3 antisense RNA 1	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr22-1973	chr22	30629530	30630530	+	17.9	1000	Intergenic	Intergenic	12810	NM_001257135	3976	Hs.2250	NM_002309	ENSG00000128342	LIF	CDF|DIA|HILDA|MLPLI	leukemia inhibitory factor	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr22-1980	chr22	32435847	32441600	+	98.6	5753	promoter-TSS (NM_000343)	promoter-TSS (NM_000343)	-296	NM_000343	6523	Hs.1964	NM_000343	ENSG00000100170	SLC5A1	D22S675|NAGT|SGLT1	solute carrier family 5 member 1	protein-coding	98.57	20.87	4.723047437	1.60E-27
chr22-1981	chr22	32448682	32450199	+	20.5	1517	"intron (NM_000343, intron 2 of 14)"	"intron (NM_000343, intron 2 of 14)"	-5717	NM_001256314	6523	Hs.1964	NM_000343	ENSG00000100170	SLC5A1	D22S675|NAGT|SGLT1	solute carrier family 5 member 1	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr22-1982	chr22	32469184	32470601	+	25	1417	"intron (NM_001256314, intron 4 of 13)"	"intron (NM_001256314, intron 4 of 13)"	14735	NM_001256314	6523	Hs.1964	NM_000343	ENSG00000100170	SLC5A1	D22S675|NAGT|SGLT1	solute carrier family 5 member 1	protein-coding	24.96	5.34	4.674157303	9.72E-08
chr22-1983	chr22	32577210	32578210	+	16	1000	Intergenic	L2c|LINE|L2	11756	NM_006605	10739	Hs.157427	NM_006605	ENSG00000128253	RFPL2	RNF79	ret finger protein like 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr22-1985	chr22	32928988	32929988	+	16.6	1000	"intron (NM_001135774, intron 10 of 13)"	"intron (NM_001135774, intron 10 of 13)"	58264	NM_001033024	25793	Hs.5912	NM_012179	ENSG00000100225	FBXO7	FBX|FBX07|FBX7|PARK15|PKPS	F-box protein 7	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr22-1989	chr22	33239298	33240298	+	17.3	1000	"intron (NM_000362, intron 1 of 4)"	"intron (NM_000362, intron 1 of 4)"	42996	NM_000362	7078	Hs.644633	NM_000362	ENSG00000100234	TIMP3	HSMRK222|K222|K222TA2|SFD	TIMP metallopeptidase inhibitor 3	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr22-199	chr22	44781822	44783613	+	40.3	1791	Intergenic	Intergenic	-56490	NR_109966	101927526	Hs.339290	NR_109966	ENSG00000232655	LINC01656	-	long intergenic non-protein coding RNA 1656	ncRNA	40.33	8.25	4.888484848	2.95E-12
chr22-1990	chr22	33308639	33309639	+	17.3	1000	"intron (NM_133633, intron 3 of 11)"	L1MC1|LINE|L1	93667	NM_133633	8224	Hs.608750	NM_003490	ENSG00000185666	SYN3	-	synapsin III	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr22-1995	chr22	33929235	33930235	+	16.6	1000	"intron (NM_004737, intron 7 of 15)"	HAL1|LINE|L1	-97080	NR_039921	100616295		NR_039921	ENSG00000266012	MIR4764	-	microRNA 4764	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr22-1996	chr22	34043721	34044974	+	21.1	1253	"intron (NM_004737, intron 4 of 15)"	"intron (NM_004737, intron 4 of 15)"	-76625	NR_038949	100506195	Hs.658872	NR_038949	ENSG00000224973	LARGE-AS1	-	LARGE antisense RNA 1	ncRNA	21.12	1.94	10.88659794	9.02E-12
chr22-2001	chr22	36033853	36034853	+	17.9	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	-10071	NM_030641	80830	Hs.257352	NM_030641	ENSG00000221963	APOL6	APOL-VI|APOLVI	apolipoprotein L6	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr22-2010	chr22	37031278	37032278	+	17.3	1000	"intron (NM_006078, intron 1 of 3)"	L2c|LINE|L2	66912	NM_006078	10369	Hs.146766	NM_006078	ENSG00000166862	CACNG2	MRD10	calcium voltage-gated channel auxiliary subunit gamma 2	protein-coding	17.28	1.46	11.83561644	2.99E-10
chr22-2011	chr22	37047205	37049055	+	30.1	1850	"intron (NM_006078, intron 1 of 3)"	AluSz|SINE|Alu	50560	NM_006078	10369	Hs.146766	NM_006078	ENSG00000166862	CACNG2	MRD10	calcium voltage-gated channel auxiliary subunit gamma 2	protein-coding	30.08	4.37	6.883295195	2.70E-12
chr22-2013	chr22	37064936	37066190	+	20.5	1254	"intron (NM_006078, intron 1 of 3)"	AluSq2|SINE|Alu	33127	NM_006078	10369	Hs.146766	NM_006078	ENSG00000166862	CACNG2	MRD10	calcium voltage-gated channel auxiliary subunit gamma 2	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr22-2026	chr22	37554020	37555020	+	17.9	1000	"intron (NM_001346222, intron 1 of 9)"	AluSx3|SINE|Alu	-8490	NM_000878	3560	Hs.474787	NM_000878	ENSG00000100385	IL2RB	CD122|IL15RB|P70-75	interleukin 2 receptor subunit beta	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr22-2027	chr22	37567294	37568294	+	17.3	1000	"intron (NM_001346222, intron 1 of 9)"	L2b|LINE|L2	3302	NM_001346223	3560	Hs.474787	NM_000878	ENSG00000100385	IL2RB	CD122|IL15RB|P70-75	interleukin 2 receptor subunit beta	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr22-2040	chr22	37918357	37919357	+	17.3	1000	Intergenic	LTR48B|LTR|ERV1	-3647	NM_014550	29775	Hs.57973	NM_014550	ENSG00000100065	CARD10	BIMP1|CARMA3	caspase recruitment domain family member 10	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr22-2055	chr22	39328731	39330494	+	29.4	1763	Intergenic	Intergenic	-23915	NM_145699	200315	Hs.226307	NM_145699	ENSG00000128383	APOBEC3A	A3A|ARP3|PHRBN|bK150C2.1	apolipoprotein B mRNA editing enzyme catalytic subunit 3A	protein-coding	29.44	4.85	6.070103093	2.13E-11
chr22-2057	chr22	39564163	39565928	+	27.5	1765	Intergenic	Intergenic	-16390	NM_001346743	23492	Hs.356416	NM_175709	ENSG00000100307	CBX7	-	chromobox 7	protein-coding	27.52	6.8	4.047058824	2.13E-07
chr22-2059	chr22	39580453	39581453	+	17.3	1000	Intergenic	MIRb|SINE|MIR	-32298	NM_001346743	23492	Hs.356416	NM_175709	ENSG00000100307	CBX7	-	chromobox 7	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr22-2062	chr22	39688166	39690371	+	32.6	2205	Intergenic	AluSx4|SINE|Alu	20648	NR_000028	116938		NR_000028	ENSG00000209480	SNORD83B	RNU83B|U83B	"small nucleolar RNA, C/D box 83B"	snoRNA	32.64	2.43	13.43209877	9.19E-20
chr22-2068	chr22	40052879	40053879	+	17.9	1000	"intron (NM_021096, intron 10 of 36)"	MIRb|SINE|MIR	86621	NM_001003406	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr22-2075	chr22	40396071	40397071	+	17.3	1000	"intron (NM_138435, intron 1 of 4)"	L2b|LINE|L2	5618	NM_138435	113828	Hs.197680	NM_138435	ENSG00000133477	FAM83F	-	family with sequence similarity 83 member F	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr22-2083	chr22	43095543	43096940	+	23.7	1397	"intron (NM_001318038, intron 1 of 2)"	"intron (NM_001318038, intron 1 of 2)"	20675	NM_017436	53947	Hs.105956	NM_017436	ENSG00000128274	A4GALT	A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK	"alpha 1,4-galactosyltransferase"	protein-coding	23.68	5.82	4.068728522	1.51E-06
chr22-209	chr22	49800074	49801333	+	24.3	1259	Intergenic	Intergenic	136411	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	24.32	2.91	8.357388316	5.77E-12
chr22-2091	chr22	43689136	43691466	+	41.6	2330	"intron (NM_173050, intron 3 of 21)"	"intron (NM_173050, intron 3 of 21)"	18353	NR_134582	101927447	Hs.621227	NR_134582	ENSG00000203527	LOC101927447	-	uncharacterized LOC101927447	ncRNA	41.61	6.8	6.119117647	3.54E-15
chr22-2097	chr22	43847495	43848752	+	19.8	1257	"intron (NM_001044370, intron 3 of 6)"	AluSx|SINE|Alu	40103	NM_001044370	758	Hs.159538	NM_001044370	ENSG00000186732	MPPED1	239AB|C22orf1|FAM1A	metallophosphoesterase domain containing 1	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr22-2098	chr22	43962683	43964277	+	28.8	1594	"intron (NM_198856, intron 24 of 29)"	"intron (NM_198856, intron 24 of 29)"	51346	NR_046563	100874197	Hs.627997	NR_046563		EFCAB6-AS1	-	EFCAB6 antisense RNA 1	ncRNA	28.8	3.88	7.422680412	1.97E-12
chr22-2101	chr22	44029580	44034188	+	71	4608	"intron (NM_198856, intron 15 of 29)"	"intron (NM_198856, intron 15 of 29)"	119750	NR_046563	100874197	Hs.627997	NR_046563		EFCAB6-AS1	-	EFCAB6 antisense RNA 1	ncRNA	71.05	12.62	5.629952456	2.28E-23
chr22-2115	chr22	44569802	44570802	+	17.9	1000	"intron (NM_001137605, intron 1 of 13)"	"intron (NM_001137605, intron 1 of 13)"	1466	NM_001137605	64098	Hs.658995	NM_022141	ENSG00000138964	PARVG	-	parvin gamma	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr22-2129	chr22	44958897	44959897	+	17.9	1000	Intergenic	L1MEc|LINE|L1	-5823	NR_028411	388910	Hs.332685	NM_001012986	ENSG00000187012	LINC00207	NCRNA00207	long intergenic non-protein coding RNA 207	ncRNA	17.92	2.43	7.374485597	1.53E-08
chr22-2131	chr22	44983172	44986498	+	46.7	3326	Intergenic	HAL1b|LINE|L1	19615	NR_028409	388910	Hs.332685	NM_001012986	ENSG00000187012	LINC00207	NCRNA00207	long intergenic non-protein coding RNA 207	ncRNA	46.73	6.8	6.872058824	1.95E-18
chr22-2139	chr22	45665241	45668925	+	56.3	3684	Intergenic	AluSz|SINE|Alu	-13785	NM_001167574	7380	Hs.632787	NM_006953	ENSG00000100373	UPK3A	UP3A|UPIII|UPIIIA|UPK3	uroplakin 3A	protein-coding	56.33	13.59	4.144959529	1.67E-14
chr22-2141	chr22	45806352	45807352	+	17.9	1000	"intron (NM_148674, intron 1 of 24)"	"intron (NM_148674, intron 1 of 24)"	2648	NM_148674	27127	Hs.334176	NM_148674	ENSG00000077935	SMC1B	SMC1BETA|SMC1L2	structural maintenance of chromosomes 1B	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr22-2146	chr22	45918322	45926423	+	153.6	8101	"intron (NM_006486, intron 3 of 16)"	"intron (NM_006486, intron 3 of 16)"	23653	NM_001996	2192	Hs.24601	NM_001996	ENSG00000077942	FBLN1	FBLN|FIBL1	fibulin 1	protein-coding	153.62	27.18	5.651949963	1.90E-49
chr22-2148	chr22	45928385	45929385	+	16	1000	"intron (NM_006486, intron 5 of 16)"	"intron (NM_006486, intron 5 of 16)"	30166	NM_001996	2192	Hs.24601	NM_001996	ENSG00000077942	FBLN1	FBLN|FIBL1	fibulin 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr22-2152	chr22	46290828	46291828	+	17.3	1000	Intergenic	Intergenic	81680	NM_058238	7477	Hs.512714	NM_058238	ENSG00000188064	WNT7B	-	Wnt family member 7B	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr22-2157	chr22	46458690	46460896	+	37.1	2206	Intergenic	MIRc|SINE|MIR	-9769	NM_018280	55267	Hs.567529	NM_018280	ENSG00000182257	PRR34	C22orf26	proline rich 34	protein-coding	37.12	3.4	10.91764706	1.72E-20
chr22-2159	chr22	46802282	46803282	+	17.3	1000	"intron (NM_014246, intron 9 of 34)"	"intron (NM_014246, intron 9 of 34)"	71484	NM_001282783	55687	Hs.439524	NM_018006	ENSG00000100416	TRMU	LCAL3|MTO2|MTU1|TRMT|TRMT1|TRNT1	tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr22-2160	chr22	46808180	46811052	+	46.1	2872	"intron (NM_014246, intron 5 of 34)"	"intron (NM_014246, intron 5 of 34)"	78318	NM_001282783	55687	Hs.439524	NM_018006	ENSG00000100416	TRMU	LCAL3|MTO2|MTU1|TRMT|TRMT1|TRNT1	tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	protein-coding	46.09	6.8	6.777941176	1.95E-18
chr22-2163	chr22	46855802	46862315	+	116.5	6513	"intron (NM_014246, intron 2 of 34)"	"intron (NM_014246, intron 2 of 34)"	74009	NM_014246	9620	Hs.252387	NM_014246	ENSG00000075275	CELSR1	ADGRC1|CDHF9|FMI2|HFMI2|ME2	cadherin EGF LAG seven-pass G-type receptor 1	protein-coding	116.49	22.81	5.106970627	1.14E-34
chr22-2165	chr22	46898441	46899441	+	16.6	1000	"intron (NM_014246, intron 1 of 34)"	"intron (NM_014246, intron 1 of 34)"	34126	NM_014246	9620	Hs.252387	NM_014246	ENSG00000075275	CELSR1	ADGRC1|CDHF9|FMI2|HFMI2|ME2	cadherin EGF LAG seven-pass G-type receptor 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr22-2166	chr22	47621670	47622670	+	17.3	1000	Intergenic	MER52A|LTR|ERV1	-119151	NR_144462	339685	Hs.434351	NR_038922		LOC339685	-	uncharacterized LOC339685	ncRNA	17.28	0.97	17.81443299	2.06E-12
chr22-2167	chr22	47663654	47664654	+	17.9	1000	Intergenic	Intergenic	-77167	NR_144462	339685	Hs.434351	NR_038922		LOC339685	-	uncharacterized LOC339685	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr22-2173	chr22	47986462	47987810	+	19.8	1348	Intergenic	Intergenic	40182	NR_033377	400932	Hs.561058	NM_001001693	ENSG00000205634	LINC00898	-	long intergenic non-protein coding RNA 898	ncRNA	19.84	3.88	5.113402062	7.67E-07
chr22-2176	chr22	48133162	48137985	+	87.1	4823	"intron (NR_122046, intron 8 of 8)"	"intron (NR_122046, intron 8 of 8)"	108150	NR_122046	284930	Hs.407567	NR_122046	ENSG00000224271	LOC284930	-	uncharacterized LOC284930	ncRNA	87.05	17.47	4.982827705	9.14E-26
chr22-218	chr22	26356567	26357821	+	26.9	1254	"intron (NM_001318245, intron 39 of 43)"	AluJr|SINE|Alu	-208246	NM_001184773	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	26.88	6.31	4.259904913	6.42E-08
chr22-2181	chr22	48470519	48472073	+	27.5	1554	Intergenic	Intergenic	-198880	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	27.52	4.85	5.674226804	7.61E-10
chr22-2188	chr22	48645331	48646892	+	26.9	1561	Intergenic	Intergenic	-24065	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	26.88	5.82	4.618556701	1.71E-08
chr22-2198	chr22	49109266	49110266	+	17.3	1000	"intron (NM_015381, intron 3 of 3)"	"intron (NM_015381, intron 3 of 3)"	-66341	NR_039761	100616415		NR_039761	ENSG00000266887	MIR4535	-	microRNA 4535	ncRNA	17.28	0	17.80043126	3.68E-16
chr22-2200	chr22	49158211	49159211	+	17.9	1000	Intergenic	L1MEf|LINE|L1	-17396	NR_039761	100616415		NR_039761	ENSG00000266887	MIR4535	-	microRNA 4535	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr22-2201	chr22	49194000	49195000	+	17.3	1000	Intergenic	Intergenic	18393	NR_039761	100616415		NR_039761	ENSG00000266887	MIR4535	-	microRNA 4535	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr22-2202	chr22	49202795	49206695	+	71	3900	Intergenic	Intergenic	28638	NR_039761	100616415		NR_039761	ENSG00000266887	MIR4535	-	microRNA 4535	ncRNA	71.05	9.71	7.317198764	1.14E-28
chr22-2206	chr22	49262035	49264345	+	42.2	2310	"intron (NR_038944, intron 1 of 6)"	"intron (NR_038944, intron 1 of 6)"	608	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	42.25	4.85	8.711340206	3.69E-20
chr22-2212	chr22	49340315	49341315	+	17.9	1000	Intergenic	Intergenic	78233	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr22-2213	chr22	49344177	49345177	+	17.3	1000	Intergenic	C-rich|Low_complexity|Low_complexity	82095	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr22-2242	chr22	50239092	50240092	+	17.9	1000	Intergenic	Intergenic	-7905	NM_014838	9889	Hs.475208	NM_014838	ENSG00000100426	ZBED4	-	zinc finger BED-type containing 4	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr22-2248	chr22	50916936	50919780	+	39	2844	Intergenic	Intergenic	-1795	NM_001253845	79924	Hs.449099	NM_024866	ENSG00000128165	ADM2	AM2|dJ579N16.4	adrenomedullin 2	protein-coding	39.04	6.8	5.741176471	1.26E-13
chr22-2252	chr22	17412262	17413262	+	17.3	1000	Intergenic	Intergenic	76350	NM_001037814	128954	Hs.434113	NM_001037814	ENSG00000215568	GAB4	-	GRB2 associated binding protein family member 4	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr22-2261	chr22	17963747	17965076	+	21.8	1329	"intron (NM_001290046, intron 2 of 18)"	"intron (NM_001290046, intron 2 of 18)"	7783	NM_001290047	27443	Hs.231895	NM_031413	ENSG00000099954	CECR2	-	"CECR2, histone acetyl-lysine reader"	protein-coding	21.76	3.4	6.4	3.73E-09
chr22-2263	chr22	18541071	18542071	+	17.9	1000	Intergenic	Intergenic	-19115	NM_017929	55670	Hs.517400	NM_017929	ENSG00000215193	PEX26	PBD7A|PBD7B|PEX26M1T|Pex26pM1T	peroxisomal biogenesis factor 26	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr22-2283	chr22	20276031	20279580	+	52.5	3549	Intergenic	Intergenic	-21989	NM_023004	65078	Hs.30868	NM_023004	ENSG00000040608	RTN4R	NGR|NOGOR	reticulon 4 receptor	protein-coding	52.49	8.74	6.005720824	6.11E-19
chr22-2284	chr22	20286518	20289628	+	54.4	3110	Intergenic	Intergenic	19555	NM_033257	85359	Hs.410965	NM_033257	ENSG00000128185	DGCR6L	DGCR6	DiGeorge syndrome critical region gene 6-like	protein-coding	54.41	7.77	7.002574003	1.47E-21
chr22-2287	chr22	21012445	21013445	+	16.6	1000	Intergenic	REP522|Satellite|telo	-30898	NR_024592	266697	Hs.558711	NR_024592		POM121L4P	-	"POM121 transmembrane nucleoporin like 4, pseudogene"	pseudo	16.64	3.88	4.288659794	1.81E-05
chr22-2289	chr22	21397226	21400613	+	52.5	3387	promoter-TSS (NR_002829)	promoter-TSS (NR_002829)	-381	NR_002829	440799	Hs.640665	NR_002829		P2RX6P	-	purinergic receptor P2X 6 pseudogene	pseudo	52.49	9.71	5.40576725	2.20E-17
chr22-2296	chr22	22702947	22704891	+	34.6	1944	Intergenic	Intergenic	51456	NR_027293	96610	Hs.449601	NM_080926	ENSG00000236850	BMS1P20	IGL|IGLV|IGLV1	"BMS1, ribosome biogenesis factor pseudogene 20"	pseudo	34.56	4.85	7.125773196	1.02E-14
chr22-2308	chr22	23261318	23262318	+	16.6	1000	Intergenic	Intergenic	31858	NM_001178126	100423062	Hs.449585	NM_001178126	ENSG00000254709	IGLL5	IGL|IGLV|VL-MAR	immunoglobulin lambda like polypeptide 5	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr22-2312	chr22	23306747	23307747	+	16.6	1000	Intergenic	L1MA2|LINE|L1	77287	NM_001178126	100423062	Hs.449585	NM_001178126	ENSG00000254709	IGLL5	IGL|IGLV|VL-MAR	immunoglobulin lambda like polypeptide 5	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr22-2315	chr22	23411960	23417727	+	94.7	5767	"intron (NM_002073, intron 1 of 2)"	"intron (NM_002073, intron 1 of 2)"	2174	NM_002073	2781	Hs.584760	NM_002073	ENSG00000128266	GNAZ	-	G protein subunit alpha z	protein-coding	94.73	16.5	5.741212121	1.34E-31
chr22-2323	chr22	24664640	24665640	+	16.6	1000	Intergenic	L1MC|LINE|L1	-1645	NR_103546	101730217	Hs.474384	NR_103546	ENSG00000258555	SPECC1L-ADORA2A	-	SPECC1L-ADORA2A readthrough (NMD candidate)	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr22-2328	chr22	25172245	25173245	+	16	1000	Intergenic	Intergenic	-2058	NM_001255975	440822	Hs.448343	NM_001008496	ENSG00000184571	PIWIL3	HIWI3	piwi like RNA-mediated gene silencing 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr22-2331	chr22	25259835	25260835	+	16	1000	"intron (NM_133454, intron 9 of 24)"	L1ME1|LINE|L1	58147	NM_133454	129049	Hs.474397	NM_133454	ENSG00000167037	SGSM1	RUTBC2	small G protein signaling modulator 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr22-2339	chr22	25833440	25834440	+	16.6	1000	Intergenic	Intergenic	-10114	NR_033733	1416	Hs.571835	NR_033733	ENSG00000100058	CRYBB2P1	CRYB2B	crystallin beta B2 pseudogene 1	pseudo	16.64	3.4	4.894117647	4.51E-06
chr22-2346	chr22	26598774	26599774	+	15.4	1000	"intron (NM_001184773, intron 1 of 16)"	L2c|LINE|L2	33834	NM_001184777	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr22-2358	chr22	26781153	26782153	+	17.3	1000	Intergenic	LTR59|LTR|ERV1	-43627	NM_020437	57168	Hs.567547	NM_020437	ENSG00000128203	ASPHD2	-	aspartate beta-hydroxylase domain containing 2	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr22-2361	chr22	27045228	27046228	+	16	1000	Intergenic	AluSc|SINE|Alu	-7718	NR_033319	440823	Hs.517502	NR_003491	ENSG00000225783	MIAT	C22orf35|GOMAFU|LINC00066|NCRNA00066|RNCR2|lncRNA-MIAT	myocardial infarction associated transcript (non-protein coding)	ncRNA	16	1.94	8.24742268	7.67E-08
chr22-2365	chr22	27466571	27468112	+	21.1	1541	Intergenic	Intergenic	-10861	NM_001318329	284898	Hs.350813	NM_001318329		LOC284898	-	uncharacterized LOC284898	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr22-2369	chr22	28182184	28184252	+	32	2068	"intron (NM_002430, intron 1 of 1)"	"intron (NM_002430, intron 1 of 1)"	14268	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	"MN1 proto-oncogene, transcriptional regulator"	protein-coding	32	5.82	5.498281787	2.32E-11
chr22-2374	chr22	29280234	29282425	+	37.1	2191	"intron (NM_001206998, intron 1 of 8)"	"intron (NM_001206998, intron 1 of 8)"	1574	NM_001206998	84133	Hs.604200	NM_032173	ENSG00000183579	ZNRF3	BK747E2.3|RNF203	zinc and ring finger 3	protein-coding	37.12	6.8	5.458823529	7.17E-13
chr22-2386	chr22	29424700	29430610	+	103.7	5910	promoter-TSS (NR_046851)	promoter-TSS (NR_046851)	-191	NR_046851	100874123	Hs.674708	NR_046851	ENSG00000177993	ZNRF3-AS1	-	ZNRF3 antisense RNA 1	ncRNA	103.69	21.36	4.854400749	1.24E-29
chr22-2390	chr22	29476192	29477192	+	17.9	1000	"intron (NM_032045, intron 1 of 9)"	MER20|DNA|hAT-Charlie	7626	NM_001039570	83999	Hs.229335	NM_032045	ENSG00000183762	KREMEN1	KREMEN|KRM1	kringle containing transmembrane protein 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr22-2392	chr22	29540550	29542338	+	30.1	1788	"3' UTR (NM_001039570, exon 9 of 9)"	"3' UTR (NM_001039570, exon 9 of 9)"	-60457	NM_133455	129080	Hs.289106	NM_133455	ENSG00000186998	EMID1	EMI5|EMU1	EMI domain containing 1	protein-coding	30.08	3.88	7.75257732	2.58E-13
chr22-2393	chr22	29601396	29604018	+	56.3	2622	"intron (NM_133455, intron 1 of 14)"	"intron (NM_133455, intron 1 of 14)"	806	NM_001267895	129080	Hs.289106	NM_133455	ENSG00000186998	EMID1	EMI5|EMU1	EMI domain containing 1	protein-coding	56.33	6.31	8.927099842	9.26E-27
chr22-2395	chr22	30845028	30846028	+	15.4	1000	Intergenic	Intergenic	22506	NM_001257379	266629	Hs.505601	NM_174975	ENSG00000100012	SEC14L3	TAP2	SEC14 like lipid binding 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr22-2396	chr22	30847603	30848603	+	16.6	1000	Intergenic	LTR45C|LTR|ERV1	19931	NM_001257379	266629	Hs.505601	NM_174975	ENSG00000100012	SEC14L3	TAP2	SEC14 like lipid binding 3	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr22-2401	chr22	32389886	32390886	+	16.6	1000	Intergenic	MLT1B|LTR|ERVL-MaLR	-48633	NM_000343	6523	Hs.1964	NM_000343	ENSG00000100170	SLC5A1	D22S675|NAGT|SGLT1	solute carrier family 5 member 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr22-2402	chr22	32402511	32403511	+	15.4	1000	Intergenic	L1M2|LINE|L1	-36008	NM_000343	6523	Hs.1964	NM_000343	ENSG00000100170	SLC5A1	D22S675|NAGT|SGLT1	solute carrier family 5 member 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr22-2412	chr22	33294869	33295869	+	16.6	1000	"intron (NM_133633, intron 3 of 11)"	"intron (NM_133633, intron 3 of 11)"	98567	NM_000362	7078	Hs.644633	NM_000362	ENSG00000100234	TIMP3	HSMRK222|K222|K222TA2|SFD	TIMP metallopeptidase inhibitor 3	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr22-2415	chr22	33438559	33439559	+	17.3	1000	"intron (NM_001135774, intron 1 of 13)"	"intron (NM_001135774, intron 1 of 13)"	15318	NM_001135774	8224	Hs.608750	NM_003490	ENSG00000185666	SYN3	-	synapsin III	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr22-2419	chr22	33484024	33485024	+	15.4	1000	Intergenic	Intergenic	-19991	NR_134617	105373006	Hs.637171	NR_134617	ENSG00000231253	LINC01640	-	long intergenic non-protein coding RNA 1640	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr22-2420	chr22	33680106	33681106	+	17.3	1000	"intron (NM_004737, intron 13 of 15)"	AluSc8|SINE|Alu	152049	NR_039921	100616295		NR_039921	ENSG00000266012	MIR4764	-	microRNA 4764	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr22-2425	chr22	35113129	35114129	+	16	1000	Intergenic	L1PREC2|LINE|L1	280276	NR_138042	101926957	Hs.722607	NR_138042		ISX-AS1	-	ISX antisense RNA 1	ncRNA	16	3.88	4.12371134	7.91E-05
chr22-2426	chr22	35775488	35777883	+	35.2	2395	promoter-TSS (NM_002133)	promoter-TSS (NM_002133)	-375	NM_002133	3162	Hs.517581	NM_002133	ENSG00000100292	HMOX1	HMOX1D|HO-1|HSP32|bK286B10	heme oxygenase 1	protein-coding	35.2	4.37	8.054919908	8.51E-16
chr22-2427	chr22	35937145	35938145	+	16	1000	"intron (NM_014310, intron 1 of 2)"	"intron (NM_014310, intron 1 of 2)"	293	NM_014310	23551	Hs.474711	NM_014310	ENSG00000100302	RASD2	MGC:4834|Rhes|TEM2	RASD family member 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr22-2428	chr22	36073499	36074499	+	16	1000	Intergenic	LTR79|LTR|ERVL	29575	NM_030641	80830	Hs.257352	NM_030641	ENSG00000221963	APOL6	APOL-VI|APOLVI	apolipoprotein L6	protein-coding	16	2.91	5.498281787	4.98E-06
chr22-2447	chr22	37327655	37331346	+	54.4	3691	"intron (NM_000395, intron 9 of 13)"	"intron (NM_000395, intron 9 of 13)"	19825	NM_000395	1439	Hs.592192	NM_000395	ENSG00000100368	CSF2RB	CD131|CDw131|IL3RB|IL5RB|SMDP5	colony stimulating factor 2 receptor beta common subunit	protein-coding	54.41	9.71	5.603501545	3.95E-18
chr22-2454	chr22	37429562	37430916	+	19.8	1354	Intergenic	Intergenic	-14015	NM_001270483	7263	Hs.474783	NM_003312	ENSG00000128311	TST	RDS	thiosulfate sulfurtransferase	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr22-2463	chr22	37755564	37756901	+	19.8	1337	"intron (NR_110512, intron 1 of 2)"	"intron (NR_110512, intron 1 of 2)"	-5353	NR_110515	100506271	Hs.220558	NR_110515	ENSG00000237862	LOC100506271	-	uncharacterized LOC100506271	ncRNA	19.84	1.94	10.22680412	9.57E-11
chr22-2464	chr22	37777893	37779273	+	24.3	1380	"intron (NM_052906, intron 2 of 2)"	AluSz|SINE|Alu	-27704	NR_110515	100506271	Hs.220558	NR_110515	ENSG00000237862	LOC100506271	-	uncharacterized LOC100506271	ncRNA	24.32	2.91	8.357388316	5.77E-12
chr22-2478	chr22	38795318	38796927	+	26.9	1609	Intergenic	Intergenic	-1191	NR_002821	400927	Hs.720223	NR_002821		LOC400927	-	TPTE and PTEN homologous inositol lipid phosphatase pseudogene	pseudo	26.88	3.4	7.905882353	1.25E-12
chr22-2480	chr22	38845811	38852328	+	97.9	6517	"intron (NM_152868, intron 1 of 1)"	"intron (NM_152868, intron 1 of 1)"	2136	NM_152868	3761	Hs.32505	NM_004981	ENSG00000168135	KCNJ4	HIR|HIRK2|HRK1|IRK-3|IRK3|Kir2.3	potassium voltage-gated channel subfamily J member 4	protein-coding	97.93	14.08	6.955255682	1.41E-37
chr22-2483	chr22	39162932	39163932	+	14.7	1000	Intergenic	MIRb|SINE|MIR	-11408	NM_015374	25777	Hs.517622	NM_015374	ENSG00000100242	SUN2	UNC84B	Sad1 and UNC84 domain containing 2	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr22-2500	chr22	40099773	40102461	+	43.5	2688	Intergenic	AluSc8|SINE|Alu	134359	NM_001003406	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding	43.53	4.85	8.975257732	4.10E-21
chr22-2505	chr22	41597478	41598478	+	16	1000	Intergenic	AluSx|SINE|Alu	-3335	NM_031488	83746	Hs.517641	NM_031488	ENSG00000100395	L3MBTL2	H-l(3)mbt-l|L3MBT	L3MBTL2 polycomb repressive complex 1 subunit	protein-coding	16	2.91	5.498281787	4.98E-06
chr22-2511	chr22	42800498	42801887	+	19.8	1389	"intron (NM_001318323, intron 2 of 4)"	"intron (NM_001318323, intron 2 of 4)"	27209	NM_001318323	150372	Hs.436677	NM_145912	ENSG00000235568	NFAM1	CNAIP	NFAT activating protein with ITAM motif 1	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr22-2515	chr22	43131465	43132749	+	19.2	1284	Intergenic	L2c|LINE|L2	-14800	NM_001318038	53947	Hs.105956	NM_017436	ENSG00000128274	A4GALT	A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK	"alpha 1,4-galactosyltransferase"	protein-coding	19.2	1.46	13.15068493	1.82E-12
chr22-2517	chr22	43597942	43599503	+	26.9	1561	TTS (NM_173050)	TTS (NM_173050)	-9958	NR_134632	105373051	Hs.629290	NR_134632	ENSG00000236272	LOC105373051	-	uncharacterized LOC105373051	ncRNA	26.88	3.88	6.927835052	1.44E-11
chr22-2518	chr22	43630022	43631710	+	25.6	1688	"intron (NM_173050, intron 7 of 21)"	"intron (NM_173050, intron 7 of 21)"	22186	NR_134632	105373051	Hs.629290	NR_134632	ENSG00000236272	LOC105373051	-	uncharacterized LOC105373051	ncRNA	25.6	5.34	4.794007491	2.00E-08
chr22-2519	chr22	43634047	43637594	+	62.1	3547	"intron (NM_173050, intron 6 of 21)"	L4|LINE|RTE	27140	NR_134632	105373051	Hs.629290	NR_134632	ENSG00000236272	LOC105373051	-	uncharacterized LOC105373051	ncRNA	62.09	10.19	6.093228656	5.95E-22
chr22-2525	chr22	43681584	43682584	+	16	1000	"intron (NM_173050, intron 4 of 21)"	MIRc|SINE|MIR	10136	NR_134582	101927447	Hs.621227	NR_134582	ENSG00000203527	LOC101927447	-	uncharacterized LOC101927447	ncRNA	16	2.91	5.498281787	4.98E-06
chr22-2530	chr22	43740593	43741593	+	16	1000	Intergenic	Intergenic	-1699	NM_173050	80274	Hs.133995	NM_173050	ENSG00000159307	SCUBE1	-	"signal peptide, CUB domain and EGF like domain containing 1"	protein-coding	16	0.97	16.49484536	3.54E-11
chr22-2532	chr22	43769319	43770319	+	16.6	1000	Intergenic	HAL1|LINE|L1	-30425	NM_173050	80274	Hs.133995	NM_173050	ENSG00000159307	SCUBE1	-	"signal peptide, CUB domain and EGF like domain containing 1"	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr22-2544	chr22	44126705	44127705	+	16.6	1000	"intron (NM_198856, intron 6 of 29)"	"intron (NM_198856, intron 6 of 29)"	81012	NM_022785	64800	Hs.658996	NM_022785	ENSG00000186976	EFCAB6	DJBP|HSCBCIP1|dJ185D5.1	EF-hand calcium binding domain 6	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr22-2548	chr22	44219084	44223176	+	71	4092	"3' UTR (NM_014351, exon 7 of 7)"	"3' UTR (NM_014351, exon 7 of 7)"	-12913	NM_198856	64800	Hs.658996	NM_022785	ENSG00000186976	EFCAB6	DJBP|HSCBCIP1|dJ185D5.1	EF-hand calcium binding domain 6	protein-coding	71.05	12.62	5.629952456	2.28E-23
chr22-2555	chr22	44464626	44468966	+	69.8	4340	"intron (NM_001243385, intron 1 of 12)"	"intron (NM_001243385, intron 1 of 12)"	1799	NM_001243385	29780	Hs.475074	NM_013327	ENSG00000188677	PARVB	CGI-56	parvin beta	protein-coding	69.77	12.13	5.751854905	2.22E-23
chr22-2573	chr22	45026820	45027820	+	16	1000	Intergenic	L1MB7|LINE|L1	-6021	NR_044991	414351	Hs.572878	NR_044991		LINC00229	C22orf10|NCRNA00229|dJ474I12.C22.2	long intergenic non-protein coding RNA 229	ncRNA	16	1.94	8.24742268	7.67E-08
chr22-2587	chr22	45960840	45964170	+	48.6	3330	TTS (NM_006485)	TTS (NM_006485)	39022	NR_131244	100506737	Hs.517692	NR_131244	ENSG00000238120	LINC01589	TCONS_00029353	long intergenic non-protein coding RNA 1589	ncRNA	48.65	12.13	4.01071723	2.52E-12
chr22-2589	chr22	46034363	46035363	+	17.3	1000	Intergenic	Intergenic	-32815	NM_001167621	25814	Hs.475125	NM_013236	ENSG00000130638	ATXN10	E46L|HUMEEP|SCA10	ataxin 10	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr22-2590	chr22	46051753	46052753	+	17.9	1000	Intergenic	MER57-int|LTR|ERV1	-15425	NM_001167621	25814	Hs.475125	NM_013236	ENSG00000130638	ATXN10	E46L|HUMEEP|SCA10	ataxin 10	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr22-2608	chr22	46945963	46947490	+	26.9	1527	Intergenic	Intergenic	-13659	NM_014246	9620	Hs.252387	NM_014246	ENSG00000075275	CELSR1	ADGRC1|CDHF9|FMI2|HFMI2|ME2	cadherin EGF LAG seven-pass G-type receptor 1	protein-coding	26.88	4.37	6.151029748	1.19E-10
chr22-2609	chr22	47638890	47639890	+	16.6	1000	Intergenic	L1MEf|LINE|L1	-101931	NR_144462	339685	Hs.434351	NR_038922		LOC339685	-	uncharacterized LOC339685	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr22-2613	chr22	47767726	47768726	+	16.6	1000	"non-coding (NR_144462, exon 4 of 4)"	"non-coding (NR_144462, exon 4 of 4)"	26905	NR_144462	339685	Hs.434351	NR_038922		LOC339685	-	uncharacterized LOC339685	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr22-2614	chr22	47865688	47867217	+	25	1529	"intron (NR_109967, intron 1 of 2)"	L1MC3|LINE|L1	16408	NR_109967	101927722	Hs.589927	NR_109967	ENSG00000218357	LINC01644	LL22NC03-75H12.2	long intergenic non-protein coding RNA 1644	ncRNA	24.96	2.43	10.27160494	2.59E-13
chr22-2617	chr22	48072621	48073621	+	16	1000	"intron (NR_122046, intron 2 of 8)"	AluSg|SINE|Alu	45698	NR_122046	284930	Hs.407567	NR_122046	ENSG00000224271	LOC284930	-	uncharacterized LOC284930	ncRNA	16	2.91	5.498281787	4.98E-06
chr22-2624	chr22	48221093	48222614	+	22.4	1521	"intron (NR_122046, intron 8 of 8)"	"intron (NR_122046, intron 8 of 8)"	194430	NR_122046	284930	Hs.407567	NR_122046	ENSG00000224271	LOC284930	-	uncharacterized LOC284930	ncRNA	22.4	4.37	5.125858124	1.32E-07
chr22-2630	chr22	48649733	48654946	+	78.7	5213	Intergenic	Intergenic	-17837	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	78.73	16.99	4.633902295	1.35E-21
chr22-2634	chr22	48737325	48738977	+	26.2	1652	Intergenic	Intergenic	67975	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	26.24	4.85	5.410309278	4.26E-09
chr22-264	chr22	29376259	29377614	+	26.2	1355	"intron (NM_032173, intron 1 of 8)"	Helitron1Nb_Mam|RC|Helitron	50528	NR_046851	100874123	Hs.674708	NR_046851	ENSG00000177993	ZNRF3-AS1	-	ZNRF3 antisense RNA 1	ncRNA	26.24	3.88	6.762886598	1.00E-10
chr22-2645	chr22	49007610	49008610	+	18.6	1000	"intron (NM_015381, intron 1 of 3)"	"intron (NM_015381, intron 1 of 3)"	35992	NM_015381	25817	Hs.436854	NM_015381	ENSG00000219438	FAM19A5	QLLK5208|TAFA-5|TAFA5|UNQ5208	"family with sequence similarity 19 member A5, C-C motif chemokine like"	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr22-2646	chr22	49112696	49113696	+	16	1000	"intron (NM_015381, intron 3 of 3)"	"intron (NM_015381, intron 3 of 3)"	-62911	NR_039761	100616415		NR_039761	ENSG00000266887	MIR4535	-	microRNA 4535	ncRNA	16	2.43	6.58436214	7.90E-07
chr22-2647	chr22	49150834	49151834	+	16	1000	Intergenic	Intergenic	-24773	NR_039761	100616415		NR_039761	ENSG00000266887	MIR4535	-	microRNA 4535	ncRNA	16	1.94	8.24742268	7.67E-08
chr22-2649	chr22	49225437	49226437	+	17.3	1000	Intergenic	Intergenic	-36645	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr22-2650	chr22	49348593	49349593	+	17.3	1000	Intergenic	MIRc|SINE|MIR	86511	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr22-2655	chr22	49470246	49471501	+	25	1255	Intergenic	AluY|SINE|Alu	208291	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	24.96	3.88	6.432989691	6.68E-10
chr22-2657	chr22	49522313	49523313	+	16.6	1000	Intergenic	THE1B|LTR|ERVL-MaLR	260231	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr22-2660	chr22	49573264	49574264	+	17.3	1000	Intergenic	Intergenic	311182	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr22-2663	chr22	49672894	49673894	+	17.3	1000	Intergenic	AluSz|SINE|Alu	263720	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr22-2667	chr22	49724442	49726795	+	44.8	2353	Intergenic	Intergenic	211496	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	44.81	8.74	5.127002288	2.02E-14
chr22-2670	chr22	49762824	49763824	+	16	1000	Intergenic	Intergenic	173790	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	16	3.88	4.12371134	7.91E-05
chr22-268	chr22	35985795	35988051	+	42.9	2256	Intergenic	Intergenic	26461	NM_005368	4151	Hs.517586	NM_005368	ENSG00000198125	MB	PVALB|myoglobgin	myoglobin	protein-coding	42.89	7.77	5.51994852	2.23E-14
chr22-2680	chr22	49992354	49993354	+	17.3	1000	"intron (NR_110523, intron 1 of 4)"	"intron (NR_110523, intron 1 of 4)"	-55740	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr22-2681	chr22	50000243	50001243	+	17.3	1000	"intron (NR_110523, intron 1 of 4)"	L1ME4a|LINE|L1	50447	NR_110522	348645	Hs.133159	NM_198851	ENSG00000188511	C22orf34	-	chromosome 22 open reading frame 34	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr22-2687	chr22	50472061	50473606	+	23	1545	Intergenic	Intergenic	-21778	NM_001001694	400935	Hs.526712	NM_001001694	ENSG00000188263	IL17REL	-	interleukin 17 receptor E like	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr22-2690	chr22	50532232	50534110	+	30.1	1878	"intron (NM_001164105, intron 2 of 25)"	"intron (NM_001164105, intron 2 of 25)"	4486	NM_001164105	54456	Hs.62880	NM_018995	ENSG00000073146	MOV10L1	CHAMP|DJ402G11.8	Mov10 RISC complex RNA helicase like 1	protein-coding	30.08	4.85	6.202061856	2.13E-11
chr22-2693	chr22	50698646	50701251	+	38.4	2605	"5' UTR (NM_001303252, exon 1 of 11)"	"5' UTR (NM_001303252, exon 1 of 11)"	291	NM_001303252	6300	Hs.432642	NM_002969	ENSG00000188130	MAPK12	ERK-6|ERK3|ERK6|MAPK 12|P38GAMMA|PRKM12|SAPK-3|SAPK3	mitogen-activated protein kinase 12	protein-coding	38.4	6.8	5.647058824	1.26E-13
chr22-2697	chr22	17764814	17765814	+	14.1	1000	Intergenic	Intergenic	-17691	NR_038398	27442	Hs.517394	NR_038398	ENSG00000241832	CECR3	-	"cat eye syndrome chromosome region, candidate 3 (non-protein coding)"	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr22-2701	chr22	17867131	17868131	+	14.7	1000	"intron (NM_001290046, intron 1 of 18)"	"intron (NM_001290046, intron 1 of 18)"	26792	NM_001290046	27443	Hs.231895	NM_031413	ENSG00000099954	CECR2	-	"CECR2, histone acetyl-lysine reader"	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr22-2702	chr22	17922285	17923285	+	16	1000	"intron (NM_001290046, intron 1 of 18)"	"intron (NM_001290046, intron 1 of 18)"	-33843	NM_001290047	27443	Hs.231895	NM_031413	ENSG00000099954	CECR2	-	"CECR2, histone acetyl-lysine reader"	protein-coding	16	3.4	4.705882353	2.25E-05
chr22-2703	chr22	17927995	17928995	+	16.6	1000	"intron (NM_001290046, intron 1 of 18)"	"intron (NM_001290046, intron 1 of 18)"	-28133	NM_001290047	27443	Hs.231895	NM_031413	ENSG00000099954	CECR2	-	"CECR2, histone acetyl-lysine reader"	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr22-271	chr22	37095380	37096635	+	25	1255	"intron (NM_006078, intron 1 of 3)"	"intron (NM_006078, intron 1 of 3)"	2683	NM_006078	10369	Hs.146766	NM_006078	ENSG00000166862	CACNG2	MRD10	calcium voltage-gated channel auxiliary subunit gamma 2	protein-coding	24.96	2.43	10.27160494	2.59E-13
chr22-2714	chr22	18984393	18985393	+	16.6	1000	"intron (NR_110533, intron 4 of 5)"	"intron (NR_110533, intron 4 of 5)"	-20454	NR_024159	25787	Hs.106311	NR_024159	ENSG00000273032	DGCR9	DGS-A	DiGeorge syndrome critical region gene 9 (non-protein coding)	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr22-2716	chr22	19143750	19145615	+	28.2	1865	Intergenic	AluJb|SINE|Alu	-6886	NM_005315	2928	Hs.534318	NM_005315	ENSG00000063515	GSC2	GSCL	goosecoid homeobox 2	protein-coding	28.16	5.34	5.27340824	7.39E-10
chr22-2719	chr22	19531668	19533302	+	25.6	1634	Intergenic	Intergenic	-19625	NM_003277	7122	Hs.505337	NM_003277	ENSG00000184113	CLDN5	AWAL|BEC1|CPETRL1|TMVCF	claudin 5	protein-coding	25.6	2.91	8.797250859	6.53E-13
chr22-2720	chr22	19559545	19561348	+	28.8	1803	Intergenic	AluSc|SINE|Alu	-6084	NR_024381	150185	Hs.719752	NR_024381		LINC00895	-	long intergenic non-protein coding RNA 895	ncRNA	28.8	3.88	7.422680412	1.97E-12
chr22-2721	chr22	19609394	19611037	+	25.6	1643	Intergenic	Intergenic	-55853	NR_024381	150185	Hs.719752	NR_024381		LINC00895	-	long intergenic non-protein coding RNA 895	ncRNA	25.6	4.37	5.85812357	7.40E-10
chr22-2736	chr22	20181571	20182571	+	14.7	1000	Intergenic	Intergenic	10370	NR_038460	284865	Hs.638498	NR_038460	ENSG00000249923	LOC284865	-	uncharacterized LOC284865	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr22-2740	chr22	20266751	20270310	+	57	3559	Intergenic	Intergenic	-12714	NM_023004	65078	Hs.30868	NM_023004	ENSG00000040608	RTN4R	NGR|NOGOR	reticulon 4 receptor	protein-coding	56.97	5.34	10.66853933	1.25E-29
chr22-2743	chr22	20972804	20973804	+	16	1000	Intergenic	L1MC4|LINE|L1	-70539	NR_024592	266697	Hs.558711	NR_024592		POM121L4P	-	"POM121 transmembrane nucleoporin like 4, pseudogene"	pseudo	16	2.91	5.498281787	4.98E-06
chr22-2745	chr22	21260782	21261782	+	16.6	1000	Intergenic	Intergenic	-10432	NM_005207	1399	Hs.5613	NM_005207	ENSG00000099942	CRKL	-	"CRK like proto-oncogene, adaptor protein"	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr22-2748	chr22	21460521	21461521	+	16.6	1000	"intron (NR_037566, intron 1 of 5)"	"intron (NR_037566, intron 1 of 5)"	3716	NR_037566	400892	Hs.745077	NM_207474		BCRP2	BCR-2|BCR2|BCRL2	breakpoint cluster region pseudogene 2	pseudo	16.64	3.88	4.288659794	1.81E-05
chr22-2749	chr22	22348687	22349687	+	16	1000	"intron (NR_135291, intron 5 of 6)"	"intron (NR_135291, intron 5 of 6)"	-11947	NM_001282113	8940	Hs.436401	NM_003935	ENSG00000100038	TOP3B	TOP3B1	topoisomerase (DNA) III beta	protein-coding	16	3.88	4.12371134	7.91E-05
chr22-2762	chr22	22761688	22763346	+	29.4	1658	Intergenic	Intergenic	100988	NR_130642	140883	Hs.43834	NM_080764	ENSG00000275004	ZNF280B	5'OY11.1|D87009.C22.3|SUHW2|ZNF279|ZNF632	zinc finger protein 280B	protein-coding	29.44	6.31	4.665610143	3.01E-09
chr22-2768	chr22	22919477	22920477	+	15.4	1000	Intergenic	L1MD2|LINE|L1	-18209	NM_206956	23532	Hs.30743	NM_006115	ENSG00000185686	PRAME	CT130|MAPE|OIP-4|OIP4	preferentially expressed antigen in melanoma	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr22-2770	chr22	22927116	22928116	+	17.3	1000	Intergenic	L1MA9|LINE|L1	-25848	NM_206956	23532	Hs.30743	NM_006115	ENSG00000185686	PRAME	CT130|MAPE|OIP-4|OIP4	preferentially expressed antigen in melanoma	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr22-2772	chr22	22942745	22943745	+	16	1000	Intergenic	Intergenic	-41477	NM_206956	23532	Hs.30743	NM_006115	ENSG00000185686	PRAME	CT130|MAPE|OIP-4|OIP4	preferentially expressed antigen in melanoma	protein-coding	16	0	16.4818808	1.26E-14
chr22-2774	chr22	23055414	23056414	+	16.6	1000	Intergenic	Intergenic	67132	NM_199127	91227	Hs.450000	NM_080839	ENSG00000100121	GGTLC2	GGTL4	gamma-glutamyltransferase light chain 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr22-2785	chr22	23440882	23448486	+	122.3	7604	"intron (NM_002073, intron 2 of 2)"	"intron (NM_002073, intron 2 of 2)"	32015	NM_002073	2781	Hs.584760	NM_002073	ENSG00000128266	GNAZ	-	G protein subunit alpha z	protein-coding	122.26	27.18	4.498160412	8.68E-32
chr22-2790	chr22	23465257	23466257	+	16	1000	"3' UTR (NM_002073, exon 3 of 3)"	"3' UTR (NM_002073, exon 3 of 3)"	18484	NM_014433	27156	Hs.526920	NM_014433	ENSG00000100218	RSPH14	RTDR1	radial spoke head 14 homolog	protein-coding	16	3.88	4.12371134	7.91E-05
chr22-2792	chr22	23760814	23762997	+	32	2183	Intergenic	MIR|SINE|MIR	-13846	NR_110538	101929374	Hs.616963	NR_110538	ENSG00000234928	LINC01659	-	long intergenic non-protein coding RNA 1659	ncRNA	32	6.31	5.071315372	1.20E-10
chr22-2795	chr22	24918841	24919841	+	16	1000	"intron (NM_016327, intron 8 of 9)"	"intron (NM_016327, intron 8 of 9)"	28090	NM_016327	51733	Hs.731656	NM_016327	ENSG00000100024	UPB1	BUP1	beta-ureidopropionase 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr22-2800	chr22	25225698	25226698	+	16.6	1000	"intron (NM_133454, intron 2 of 24)"	"intron (NM_133454, intron 2 of 24)"	24010	NM_133454	129049	Hs.474397	NM_133454	ENSG00000167037	SGSM1	RUTBC2	small G protein signaling modulator 1	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr22-2803	chr22	25371356	25372610	+	17.9	1254	Intergenic	Intergenic	-36669	NM_001001663	255349	Hs.329040	NM_001001663	ENSG00000206069	TMEM211	bA9F11.1	transmembrane protein 211	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr22-2804	chr22	25482105	25484749	+	32.6	2644	"intron (NM_001145206, intron 4 of 10)"	AluSx1|SINE|Alu	25232	NR_038941	100128531	Hs.662126	NR_038941	ENSG00000203280	LOC100128531	-	uncharacterized LOC100128531	ncRNA	32.64	3.88	8.412371134	3.92E-15
chr22-2811	chr22	25601054	25602589	+	23.7	1535	"intron (NM_004076, intron 5 of 5)"	"intron (NM_004076, intron 5 of 5)"	6004	NM_004076	1417	Hs.533022	NM_004076	ENSG00000100053	CRYBB3	CATCN2|CRYB3|CTRCT22	crystallin beta B3	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr22-2813	chr22	25619409	25620409	+	14.7	1000	"intron (NM_000496, intron 2 of 5)"	AluY|SINE|Alu	4297	NM_000496	1415	Hs.373074	NM_000496	ENSG00000244752	CRYBB2	CCA2|CRYB2|CRYB2A|CTRCT3|D22S665	crystallin beta B2	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr22-2815	chr22	25719990	25723926	+	60.8	3936	Intergenic	AluSx|SINE|Alu	7734	NR_029395	91353	Hs.651077	NM_001013618		IGLL3P	16.1|IGLL3	"immunoglobulin lambda like polypeptide 3, pseudogene"	pseudo	60.81	6.8	8.942647059	2.54E-28
chr22-2819	chr22	26330242	26331242	+	16	1000	"intron (NM_001318245, intron 34 of 43)"	MER4A1|LTR|ERV1	192631	NM_001318245	84700	Hs.417959	NM_032608	ENSG00000133454	MYO18B	KFS4	myosin XVIIIB	protein-coding	16	3.88	4.12371134	7.91E-05
chr22-282	chr22	43778178	43782141	+	65.9	3963	Intergenic	AluSc8|SINE|Alu	-27861	NM_001044370	758	Hs.159538	NM_001044370	ENSG00000186732	MPPED1	239AB|C22orf1|FAM1A	metallophosphoesterase domain containing 1	protein-coding	65.93	15.05	4.380730897	2.48E-17
chr22-2823	chr22	26463273	26464273	+	16	1000	Intergenic	LTR16C|LTR|ERVL	-101667	NM_001184773	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	16	3.88	4.12371134	7.91E-05
chr22-2824	chr22	26488878	26489878	+	16.6	1000	Intergenic	L2a|LINE|L2	-76062	NM_001184773	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr22-2826	chr22	26533952	26536176	+	35.2	2224	Intergenic	Intergenic	-30376	NM_001184773	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	35.2	2.91	12.09621993	4.47E-20
chr22-2832	chr22	26609716	26610716	+	16.6	1000	"intron (NM_001184773, intron 1 of 16)"	MIR|SINE|MIR	44776	NM_001184777	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr22-2835	chr22	26754962	26755962	+	16	1000	"intron (NM_001184777, intron 12 of 14)"	MIR|SINE|MIR	-69818	NM_020437	57168	Hs.567547	NM_020437	ENSG00000128203	ASPHD2	-	aspartate beta-hydroxylase domain containing 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr22-2848	chr22	27620180	27621180	+	16.6	1000	Intergenic	Intergenic	37202	NM_001318392	105372977	Hs.743180	NM_001318392		LOC105372977	-	uncharacterized LOC105372977	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr22-2855	chr22	27986266	27987558	+	23	1292	Intergenic	G-rich|Low_complexity|Low_complexity	210574	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	"MN1 proto-oncogene, transcriptional regulator"	protein-coding	23.04	5.34	4.314606742	4.49E-07
chr22-2857	chr22	28041309	28042309	+	15.4	1000	Intergenic	Intergenic	155677	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	"MN1 proto-oncogene, transcriptional regulator"	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr22-2859	chr22	28088071	28089071	+	16	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	108915	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	"MN1 proto-oncogene, transcriptional regulator"	protein-coding	16	3.88	4.12371134	7.91E-05
chr22-2862	chr22	28912655	28913655	+	15.4	1000	"intron (NM_001145418, intron 2 of 22)"	"intron (NM_001145418, intron 2 of 22)"	57298	NR_106713	102466081		NR_106713	ENSG00000276162	MIR5739	hsa-mir-5739	microRNA 5739	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr22-2863	chr22	28921354	28922354	+	15.4	1000	"intron (NM_001145418, intron 2 of 22)"	"intron (NM_001145418, intron 2 of 22)"	65997	NR_106713	102466081		NR_106713	ENSG00000276162	MIR5739	hsa-mir-5739	microRNA 5739	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr22-2870	chr22	29260153	29262546	+	35.8	2393	Intergenic	L2b|LINE|L2	-18406	NM_001206998	84133	Hs.604200	NM_032173	ENSG00000183579	ZNRF3	BK747E2.3|RNF203	zinc and ring finger 3	protein-coding	35.84	8.25	4.344242424	3.05E-10
chr22-2883	chr22	29400290	29401978	+	25.6	1688	"intron (NM_032173, intron 2 of 8)"	"intron (NM_032173, intron 2 of 8)"	26330	NR_046851	100874123	Hs.674708	NR_046851	ENSG00000177993	ZNRF3-AS1	-	ZNRF3 antisense RNA 1	ncRNA	25.6	4.85	5.278350515	4.26E-09
chr22-2890	chr22	29448289	29449289	+	16.6	1000	"intron (NM_032173, intron 8 of 8)"	AluJr|SINE|Alu	9118	NM_015370	25770	Hs.50891	NM_015370	ENSG00000100249	C22orf31	HS747E2A|bK747E2.1	chromosome 22 open reading frame 31	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr22-290	chr22	48921283	48922283	+	23.7	1000	"intron (NM_001082967, intron 1 of 3)"	"intron (NM_001082967, intron 1 of 3)"	21416	NR_038917	284933	Hs.159057	NR_038917	ENSG00000281732	LOC284933	-	uncharacterized LOC284933	ncRNA	23.68	5.82	4.068728522	1.51E-06
chr22-2901	chr22	29840699	29841699	+	16	1000	Intergenic	L2a|LINE|L2	-3081	NR_002727	10740	Hs.167750	NR_002727		RFPL1S	NCRNA00006|RFPL1-AS|RFPL1-AS1|RFPL1AS	RFPL1 antisense RNA 1	ncRNA	16	3.88	4.12371134	7.91E-05
chr22-2902	chr22	30114840	30115840	+	16.6	1000	Intergenic	Intergenic	-1004	NM_182527	164633	Hs.643608	NM_182527	ENSG00000100314	CABP7	CALN2	calcium binding protein 7	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr22-2906	chr22	30878411	30879411	+	15.4	1000	Intergenic	AluSz|SINE|Alu	-1168	NR_001580	376844	Hs.534651	NR_001580		SDC4P	-	syndecan 4 pseudogene	pseudo	15.36	1.94	7.917525773	7.67E-08
chr22-2909	chr22	31410251	31411537	+	22.4	1286	Intergenic	AluJo|SINE|Alu	45697	NR_110492	55000	Hs.554829	NR_002323		TUG1	LINC00080|NCRNA00080|TI-227H	taurine up-regulated 1 (non-protein coding)	ncRNA	22.4	2.91	7.697594502	3.87E-10
chr22-291	chr22	49635820	49637070	+	27.5	1250	Intergenic	Intergenic	300669	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	27.52	6.31	4.36133122	6.42E-08
chr22-2910	chr22	32393100	32394100	+	16.6	1000	Intergenic	AluSg|SINE|Alu	-45419	NM_000343	6523	Hs.1964	NM_000343	ENSG00000100170	SLC5A1	D22S675|NAGT|SGLT1	solute carrier family 5 member 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr22-2913	chr22	32507564	32512243	+	71	4679	TTS (NM_000343)	TTS (NM_000343)	-8061	NR_040114	23782	Hs.581098	NR_040114	ENSG00000234479	AP1B1P1	ADTB1L1|dJ127L4.2	adaptor related protein complex 1 beta 1 subunit pseudogene 1	pseudo	71.05	12.62	5.629952456	2.28E-23
chr22-2915	chr22	32597915	32600512	+	36.5	2597	promoter-TSS (NM_001159546)	promoter-TSS (NM_001159546)	251	NM_001098527	10739	Hs.157427	NM_006605	ENSG00000128253	RFPL2	RNF79	ret finger protein like 2	protein-coding	36.48	5.82	6.268041237	1.09E-13
chr22-2919	chr22	32955835	32956835	+	16	1000	"intron (NM_001135774, intron 7 of 13)"	MER50|LTR|ERV1	85111	NM_001033024	25793	Hs.5912	NM_012179	ENSG00000100225	FBXO7	FBX|FBX07|FBX7|PARK15|PKPS	F-box protein 7	protein-coding	16	2.43	6.58436214	7.90E-07
chr22-2925	chr22	33393789	33394789	+	16	1000	"intron (NM_001135774, intron 2 of 13)"	"intron (NM_001135774, intron 2 of 13)"	8517	NM_133633	8224	Hs.608750	NM_003490	ENSG00000185666	SYN3	-	synapsin III	protein-coding	16	2.43	6.58436214	7.90E-07
chr22-293	chr22	50081634	50085077	+	67.2	3443	Intergenic	Intergenic	-32165	NR_110523	348645	Hs.133159	NM_198851	ENSG00000188511	C22orf34	-	chromosome 22 open reading frame 34	protein-coding	67.21	13.11	5.1266209	1.86E-20
chr22-2932	chr22	33953132	33954132	+	16	1000	"intron (NM_004737, intron 7 of 15)"	AluSx1|SINE|Alu	-120977	NR_039921	100616295		NR_039921	ENSG00000266012	MIR4764	-	microRNA 4764	ncRNA	16	1.46	10.95890411	3.44E-09
chr22-2936	chr22	34683070	34684070	+	17.9	1000	Intergenic	(TCCA)n|Simple_repeat|Simple_repeat	-367154	NM_133642	9215	Hs.474667	NM_004737	ENSG00000133424	LARGE1	LARGE|MDC1D|MDDGA6|MDDGB6	LARGE xylosyl- and glucuronyltransferase 1	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr22-2948	chr22	36526891	36527891	+	16	1000	Intergenic	Intergenic	29586	NM_145640	80833	Hs.474737	NM_014349	ENSG00000128284	APOL3	APOLIII|CG121|CG12_1|apoL-III	apolipoprotein L3	protein-coding	16	1.94	8.24742268	7.67E-08
chr22-2950	chr22	36595709	36596709	+	16	1000	"intron (NM_145660, intron 2 of 5)"	MIR|SINE|MIR	4670	NM_145660	80832	Hs.115099	NM_030643	ENSG00000100336	APOL4	APOL-IV|APOLIV	apolipoprotein L4	protein-coding	16	1.94	8.24742268	7.67E-08
chr22-2951	chr22	36599661	36600661	+	16	1000	"intron (NM_145660, intron 1 of 5)"	MIR3|SINE|MIR	718	NM_145660	80832	Hs.115099	NM_030643	ENSG00000100336	APOL4	APOL-IV|APOLIV	apolipoprotein L4	protein-coding	16	0.97	16.49484536	3.54E-11
chr22-2954	chr22	36952711	36953711	+	14.7	1000	Intergenic	Intergenic	-27934	NM_003753	8664	Hs.55682	NM_003753	ENSG00000100353	EIF3D	EIF3S7|eIF3-p66|eIF3-zeta	eukaryotic translation initiation factor 3 subunit D	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr22-2955	chr22	36979947	36983149	+	41.6	3202	"intron (NM_006078, intron 2 of 3)"	MER58A|DNA|hAT-Charlie	-56271	NM_003753	8664	Hs.55682	NM_003753	ENSG00000100353	EIF3D	EIF3S7|eIF3-p66|eIF3-zeta	eukaryotic translation initiation factor 3 subunit D	protein-coding	41.61	8.74	4.760869565	2.55E-12
chr22-2966	chr22	37081678	37082678	+	16	1000	"intron (NM_006078, intron 1 of 3)"	"intron (NM_006078, intron 1 of 3)"	16512	NM_006078	10369	Hs.146766	NM_006078	ENSG00000166862	CACNG2	MRD10	calcium voltage-gated channel auxiliary subunit gamma 2	protein-coding	16	2.43	6.58436214	7.90E-07
chr22-2973	chr22	37105236	37106236	+	15.4	1000	"intron (NR_134623, intron 1 of 3)"	L2a|LINE|L2	5815	NR_134623	105373021	Hs.401697	NR_134623		LOC105373021	-	uncharacterized LOC105373021	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr22-2976	chr22	37141893	37142893	+	16	1000	"intron (NR_134623, intron 2 of 3)"	FLAM_A|SINE|Alu	29784	NM_006860	11020	Hs.415172	NM_006860	ENSG00000100360	IFT27	BBS19|RABL4|RAYL	intraflagellar transport 27	protein-coding	16	3.4	4.705882353	2.25E-05
chr22-2977	chr22	37183241	37184617	+	23	1376	Intergenic	Intergenic	-11752	NR_033531	11020	Hs.415172	NM_006860	ENSG00000100360	IFT27	BBS19|RABL4|RAYL	intraflagellar transport 27	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr22-298	chr22	19759546	19760800	+	22.4	1254	"intron (NM_005992, intron 8 of 9)"	"intron (NM_005992, intron 8 of 9)"	15947	NM_080647	6899	Hs.173984	NM_005992	ENSG00000184058	TBX1	CAFS|CATCH22|CTHM|DGCR|DGS|DORV|TBX1C|TGA|VCF|VCFS	T-box 1	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr22-2981	chr22	37243191	37247033	+	51.2	3842	Intergenic	Intergenic	-11918	NM_013416	4689	Hs.474781	NM_000631	ENSG00000100365	NCF4	CGD3|NCF|P40PHOX|SH3PXD4	neutrophil cytosolic factor 4	protein-coding	51.21	7.77	6.590733591	6.93E-20
chr22-2982	chr22	37250878	37251878	+	16.6	1000	Intergenic	MER115|DNA|hAT-Tip100	-5652	NM_013416	4689	Hs.474781	NM_000631	ENSG00000100365	NCF4	CGD3|NCF|P40PHOX|SH3PXD4	neutrophil cytosolic factor 4	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr22-2983	chr22	37281600	37282600	+	16	1000	Intergenic	ERVL-B4-int|LTR|ERVL	25070	NM_000631	4689	Hs.474781	NM_000631	ENSG00000100365	NCF4	CGD3|NCF|P40PHOX|SH3PXD4	neutrophil cytosolic factor 4	protein-coding	16	1.94	8.24742268	7.67E-08
chr22-2998	chr22	37572312	37575964	+	53.1	3652	Intergenic	Intergenic	-2980	NM_001346222	3560	Hs.474787	NM_000878	ENSG00000100385	IL2RB	CD122|IL15RB|P70-75	interleukin 2 receptor subunit beta	protein-coding	53.13	11.65	4.560515021	8.89E-15
chr22-3017	chr22	37822076	37824939	+	44.8	2863	promoter-TSS (NR_110512)	promoter-TSS (NR_110512)	-2	NR_110512	114794	Hs.344170	NM_052906	ENSG00000166897	ELFN2	LRRC62|PPP1R29	extracellular leucine rich repeat and fibronectin type III domain containing 2	protein-coding	44.81	5.82	7.699312715	1.25E-19
chr22-3019	chr22	37826946	37834341	+	125.5	7395	Intergenic	Intergenic	-7138	NR_110512	114794	Hs.344170	NM_052906	ENSG00000166897	ELFN2	LRRC62|PPP1R29	extracellular leucine rich repeat and fibronectin type III domain containing 2	protein-coding	125.46	31.06	4.039278815	2.18E-29
chr22-3022	chr22	37913075	37914075	+	16.6	1000	"intron (NM_014550, intron 2 of 19)"	AluSc5|SINE|Alu	1635	NM_014550	29775	Hs.57973	NM_014550	ENSG00000100065	CARD10	BIMP1|CARMA3	caspase recruitment domain family member 10	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr22-3025	chr22	37998466	37999722	+	20.5	1256	Intergenic	AluSx|SINE|Alu	-5387	NM_013365	26088	Hs.499158	NM_013365	ENSG00000100083	GGA1	-	"golgi associated, gamma adaptin ear containing, ARF binding protein 1"	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr22-3027	chr22	38424994	38425994	+	16.6	1000	"intron (NM_001301130, intron 5 of 5)"	L2c|LINE|L2	-27768	NM_001039583	9463	Hs.180871	NM_012407	ENSG00000100151	PICK1	PICK|PRKCABP	protein interacting with PRKCA 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr22-3037	chr22	39268563	39270879	+	38.4	2316	Intergenic	Intergenic	-1382	NM_001303494	23466	Hs.592201	NM_014292	ENSG00000183741	CBX6	-	chromobox 6	protein-coding	38.4	7.28	5.274725275	6.93E-13
chr22-3039	chr22	39337421	39339223	+	32.6	1802	Intergenic	Intergenic	-15205	NM_145699	200315	Hs.226307	NM_145699	ENSG00000128383	APOBEC3A	A3A|ARP3|PHRBN|bK150C2.1	apolipoprotein B mRNA editing enzyme catalytic subunit 3A	protein-coding	32.64	6.31	5.17274168	1.20E-10
chr22-3056	chr22	39970199	39971199	+	16.6	1000	"intron (NM_021096, intron 1 of 36)"	MER20B|DNA|hAT-Charlie	3941	NM_001003406	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr22-306	chr22	25155320	25158332	+	49.3	3012	"intron (NM_001008496, intron 2 of 20)"	L2a|LINE|L2	-3642	NR_001283	7152	Hs.381281	NR_001283		TOP1P2	-	topoisomerase (DNA) I pseudogene 2	pseudo	49.29	10.68	4.615168539	5.88E-14
chr22-3070	chr22	42358925	42359925	+	16.6	1000	Intergenic	AluSz|SINE|Alu	11234	NR_024355	339674	Hs.517656	NR_024355	ENSG00000205704	LINC00634	BK250D10.8	long intergenic non-protein coding RNA 634	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr22-3071	chr22	42370855	42374526	+	80.7	3671	promoter-TSS (NM_019106)	promoter-TSS (NM_019106)	-241	NM_019106	55964	Hs.120483	NM_019106	ENSG00000100167	3-Sep	SEP3|bK250D10.3	septin 3	protein-coding	80.65	11.65	6.922746781	1.72E-31
chr22-3073	chr22	42384991	42385991	+	16	1000	"intron (NM_145733, intron 5 of 10)"	"intron (NM_145733, intron 5 of 10)"	-9238	NM_152613	164684	Hs.655541	NM_152613	ENSG00000183066	WBP2NL	GRAMD7|PAWP	WBP2 N-terminal like	protein-coding	16	3.4	4.705882353	2.25E-05
chr22-3074	chr22	42795925	42796925	+	16	1000	"intron (NM_001318323, intron 2 of 4)"	AluSq2|SINE|Alu	-31211	NR_120596	102723775	Hs.335413	NR_120595	ENSG00000229891	LINC01315	lnc-C22orf32-1	long intergenic non-protein coding RNA 1315	ncRNA	16	2.43	6.58436214	7.90E-07
chr22-3078	chr22	43140622	43141622	+	15.4	1000	Intergenic	AluSx|SINE|Alu	-23815	NM_001318038	53947	Hs.105956	NM_017436	ENSG00000128274	A4GALT	A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK	"alpha 1,4-galactosyltransferase"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr22-3079	chr22	43149507	43150771	+	19.8	1264	Intergenic	Charlie25|DNA|hAT-Charlie	-32832	NM_001318038	53947	Hs.105956	NM_017436	ENSG00000128274	A4GALT	A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK	"alpha 1,4-galactosyltransferase"	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr22-3085	chr22	43677517	43679679	+	32	2162	"non-coding (NR_134582, exon 2 of 2)"	"non-coding (NR_134582, exon 2 of 2)"	6650	NR_134582	101927447	Hs.621227	NR_134582	ENSG00000203527	LOC101927447	-	uncharacterized LOC101927447	ncRNA	32	6.31	5.071315372	1.20E-10
chr22-3090	chr22	43694049	43695049	+	14.7	1000	"intron (NM_173050, intron 3 of 21)"	"intron (NM_173050, intron 3 of 21)"	22601	NR_134582	101927447	Hs.621227	NR_134582	ENSG00000203527	LOC101927447	-	uncharacterized LOC101927447	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr22-3091	chr22	43707200	43708200	+	15.4	1000	"intron (NM_173050, intron 3 of 21)"	AluSx1|SINE|Alu	31694	NM_173050	80274	Hs.133995	NM_173050	ENSG00000159307	SCUBE1	-	"signal peptide, CUB domain and EGF like domain containing 1"	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr22-3093	chr22	43728101	43729101	+	16	1000	"intron (NM_173050, intron 2 of 21)"	"intron (NM_173050, intron 2 of 21)"	10793	NM_173050	80274	Hs.133995	NM_173050	ENSG00000159307	SCUBE1	-	"signal peptide, CUB domain and EGF like domain containing 1"	protein-coding	16	1.94	8.24742268	7.67E-08
chr22-3094	chr22	43732887	43735775	+	40.3	2888	"intron (NM_173050, intron 2 of 21)"	"intron (NM_173050, intron 2 of 21)"	5063	NM_173050	80274	Hs.133995	NM_173050	ENSG00000159307	SCUBE1	-	"signal peptide, CUB domain and EGF like domain containing 1"	protein-coding	40.33	7.28	5.539835165	1.26E-13
chr22-3099	chr22	43787937	43788937	+	16	1000	Intergenic	Intergenic	-19583	NM_001044370	758	Hs.159538	NM_001044370	ENSG00000186732	MPPED1	239AB|C22orf1|FAM1A	metallophosphoesterase domain containing 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr22-3101	chr22	43801311	43802311	+	16	1000	Intergenic	Intergenic	-6209	NM_001044370	758	Hs.159538	NM_001044370	ENSG00000186732	MPPED1	239AB|C22orf1|FAM1A	metallophosphoesterase domain containing 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr22-3105	chr22	43830856	43833032	+	34.6	2176	"intron (NM_001044370, intron 3 of 6)"	"intron (NM_001044370, intron 3 of 6)"	23924	NM_001044370	758	Hs.159538	NM_001044370	ENSG00000186732	MPPED1	239AB|C22orf1|FAM1A	metallophosphoesterase domain containing 1	protein-coding	34.56	4.85	7.125773196	1.02E-14
chr22-311	chr22	26737618	26738618	+	23	1000	"intron (NM_001184773, intron 10 of 16)"	"intron (NM_001184773, intron 10 of 16)"	-87162	NM_020437	57168	Hs.567547	NM_020437	ENSG00000128203	ASPHD2	-	aspartate beta-hydroxylase domain containing 2	protein-coding	23.04	4.37	5.272311213	2.46E-08
chr22-3114	chr22	44326190	44327190	+	16.6	1000	"intron (NM_025225, intron 3 of 8)"	"intron (NM_025225, intron 3 of 8)"	7071	NM_025225	80339	Hs.654800	NM_025225	ENSG00000100344	PNPLA3	ADPN|C22orf20|iPLA(2)epsilon	patatin like phospholipase domain containing 3	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr22-3118	chr22	44478318	44479652	+	23.7	1334	"intron (NM_001243385, intron 1 of 12)"	"intron (NM_001243385, intron 1 of 12)"	13988	NM_001243385	29780	Hs.475074	NM_013327	ENSG00000188677	PARVB	CGI-56	parvin beta	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr22-3128	chr22	44757137	44758137	+	15.4	1000	Intergenic	MLT1B|LTR|ERVL-MaLR	-48906	NM_001099294	85352	Hs.6829	NM_001099294	ENSG00000138944	KIAA1644	-	KIAA1644	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr22-3131	chr22	44777637	44778637	+	14.1	1000	Intergenic	MIR|SINE|MIR	-61070	NR_109966	101927526	Hs.339290	NR_109966	ENSG00000232655	LINC01656	-	long intergenic non-protein coding RNA 1656	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr22-3135	chr22	44919766	44921153	+	21.8	1387	Intergenic	Intergenic	-26454	NM_032287	84247	Hs.744991	NM_032287	ENSG00000188636	LDOC1L	Mar6|Mart6|dJ1033E15.2	leucine zipper down-regulated in cancer 1 like	protein-coding	21.76	3.4	6.4	3.73E-09
chr22-3141	chr22	44990946	44995788	+	73	4842	Intergenic	Intergenic	27932	NR_044991	414351	Hs.572878	NR_044991		LINC00229	C22orf10|NCRNA00229|dJ474I12.C22.2	long intergenic non-protein coding RNA 229	ncRNA	72.97	8.74	8.348970252	1.06E-32
chr22-3142	chr22	45000562	45004006	+	53.8	3444	TTS (NR_044991)	TTS (NR_044991)	19015	NR_044991	414351	Hs.572878	NR_044991		LINC00229	C22orf10|NCRNA00229|dJ474I12.C22.2	long intergenic non-protein coding RNA 229	ncRNA	53.77	6.31	8.521394612	7.25E-25
chr22-3146	chr22	45072551	45073551	+	16	1000	"5' UTR (NM_015366, exon 1 of 9)"	"5' UTR (NM_015366, exon 1 of 9)"	363	NM_001017530	55615	Hs.102336	NM_015366	ENSG00000186654	PRR5	FLJ20185k|PP610|PROTOR-1|PROTOR1	proline rich 5	protein-coding	16	3.88	4.12371134	7.91E-05
chr22-3156	chr22	45823523	45824523	+	16	1000	"intron (NM_015653, intron 6 of 7)"	L2a|LINE|L2	14451	NM_015653	26150	Hs.475110	NM_015653	ENSG00000128408	RIBC2	C22orf11|TRIB	RIB43A domain with coiled-coils 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr22-3163	chr22	45981360	45982360	+	15.4	1000	"intron (NM_006486, intron 16 of 16)"	"intron (NM_006486, intron 16 of 16)"	19667	NR_131244	100506737	Hs.517692	NR_131244	ENSG00000238120	LINC01589	TCONS_00029353	long intergenic non-protein coding RNA 1589	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr22-3173	chr22	46329762	46331154	+	17.3	1392	"intron (NM_058238, intron 2 of 3)"	"intron (NM_058238, intron 2 of 3)"	42550	NM_058238	7477	Hs.512714	NM_058238	ENSG00000188064	WNT7B	-	Wnt family member 7B	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr22-3177	chr22	46436059	46441635	+	85.1	5576	"intron (NR_027036, intron 2 of 3)"	"intron (NR_027036, intron 2 of 3)"	1901	NR_027036	100271722	Hs.528519	NR_027036		LINC00899	-	long intergenic non-protein coding RNA 899	ncRNA	85.13	16.02	5.313982522	2.21E-26
chr22-3181	chr22	46454375	46455375	+	16	1000	TTS (NR_027034)	TTS (NR_027034)	-4851	NM_018280	55267	Hs.567529	NM_018280	ENSG00000182257	PRR34	C22orf26	proline rich 34	protein-coding	16	3.88	4.12371134	7.91E-05
chr22-3191	chr22	47666559	47667559	+	14.7	1000	Intergenic	L1ME4a|LINE|L1	-74262	NR_144462	339685	Hs.434351	NR_038922		LOC339685	-	uncharacterized LOC339685	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr22-3196	chr22	47802033	47804157	+	32	2124	Intergenic	Intergenic	61774	NR_144462	339685	Hs.434351	NR_038922		LOC339685	-	uncharacterized LOC339685	ncRNA	32	4.85	6.597938144	5.03E-13
chr22-3202	chr22	47975029	47976029	+	16	1000	Intergenic	MER4-int|LTR|ERV1	51789	NR_033377	400932	Hs.561058	NM_001001693	ENSG00000205634	LINC00898	-	long intergenic non-protein coding RNA 898	ncRNA	16	3.88	4.12371134	7.91E-05
chr22-3204	chr22	48088496	48089496	+	14.1	1000	"intron (NR_122046, intron 6 of 8)"	"intron (NR_122046, intron 6 of 8)"	61573	NR_122046	284930	Hs.407567	NR_122046	ENSG00000224271	LOC284930	-	uncharacterized LOC284930	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr22-321	chr22	36974663	36976261	+	35.2	1598	"intron (NM_006078, intron 2 of 3)"	AluSq|SINE|Alu	-50185	NM_003753	8664	Hs.55682	NM_003753	ENSG00000100353	EIF3D	EIF3S7|eIF3-p66|eIF3-zeta	eukaryotic translation initiation factor 3 subunit D	protein-coding	35.2	4.85	7.257731959	1.02E-14
chr22-3210	chr22	48202104	48203104	+	16	1000	"intron (NR_122046, intron 8 of 8)"	"intron (NR_122046, intron 8 of 8)"	175181	NR_122046	284930	Hs.407567	NR_122046	ENSG00000224271	LOC284930	-	uncharacterized LOC284930	ncRNA	16	2.43	6.58436214	7.90E-07
chr22-3213	chr22	48306488	48307488	+	15.4	1000	Intergenic	L1MEc|LINE|L1	279565	NR_122046	284930	Hs.407567	NR_122046	ENSG00000224271	LOC284930	-	uncharacterized LOC284930	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr22-3215	chr22	48314831	48315831	+	16.6	1000	Intergenic	Intergenic	287908	NR_122046	284930	Hs.407567	NR_122046	ENSG00000224271	LOC284930	-	uncharacterized LOC284930	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr22-3221	chr22	48586841	48587841	+	17.3	1000	Intergenic	L1MD2|LINE|L1	-82835	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr22-3222	chr22	48600840	48602471	+	25.6	1631	Intergenic	Intergenic	-68521	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	25.6	4.37	5.85812357	7.40E-10
chr22-3226	chr22	48786955	48787955	+	16	1000	Intergenic	Intergenic	-97817	NM_001082967	25817	Hs.436854	NM_015381	ENSG00000219438	FAM19A5	QLLK5208|TAFA-5|TAFA5|UNQ5208	"family with sequence similarity 19 member A5, C-C motif chemokine like"	protein-coding	16	3.88	4.12371134	7.91E-05
chr22-3230	chr22	48913075	48914075	+	14.7	1000	"intron (NM_001082967, intron 1 of 3)"	"intron (NM_001082967, intron 1 of 3)"	28303	NM_001082967	25817	Hs.436854	NM_015381	ENSG00000219438	FAM19A5	QLLK5208|TAFA-5|TAFA5|UNQ5208	"family with sequence similarity 19 member A5, C-C motif chemokine like"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr22-3235	chr22	49060980	49063046	+	39	2066	"intron (NM_015381, intron 2 of 3)"	"intron (NM_015381, intron 2 of 3)"	89895	NM_015381	25817	Hs.436854	NM_015381	ENSG00000219438	FAM19A5	QLLK5208|TAFA-5|TAFA5|UNQ5208	"family with sequence similarity 19 member A5, C-C motif chemokine like"	protein-coding	39.04	8.25	4.732121212	1.43E-11
chr22-3236	chr22	49104953	49105953	+	15.4	1000	"intron (NM_015381, intron 3 of 3)"	"intron (NM_015381, intron 3 of 3)"	-70654	NR_039761	100616415		NR_039761	ENSG00000266887	MIR4535	-	microRNA 4535	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr22-3238	chr22	49142005	49143005	+	15.4	1000	"intron (NM_015381, intron 3 of 3)"	"intron (NM_015381, intron 3 of 3)"	-33602	NR_039761	100616415		NR_039761	ENSG00000266887	MIR4535	-	microRNA 4535	ncRNA	15.36	0	15.82260557	1.26E-14
chr22-3244	chr22	49270300	49271300	+	16.6	1000	"intron (NR_038944, intron 1 of 6)"	L1MCa|LINE|L1	8218	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr22-3248	chr22	49412524	49413524	+	16.6	1000	Intergenic	LTR1|LTR|ERV1	150442	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr22-3272	chr22	49874940	49876278	+	20.5	1338	"intron (NR_110523, intron 1 of 4)"	"intron (NR_110523, intron 1 of 4)"	61505	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr22-3281	chr22	50346811	50347811	+	15.4	1000	Intergenic	Intergenic	-6832	NM_001001852	415116	Hs.530381	NM_001001852	ENSG00000198355	PIM3	pim-3	"Pim-3 proto-oncogene, serine/threonine kinase"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr22-3282	chr22	50491389	50492699	+	22.4	1310	Intergenic	Intergenic	31737	NM_139202	23209	Hs.517729	NM_015166	ENSG00000100427	MLC1	LVM|MLC|VL	megalencephalic leukoencephalopathy with subcortical cysts 1	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr22-3286	chr22	50584230	50585230	+	16	1000	promoter-TSS (NM_001164106)	promoter-TSS (NM_001164106)	-754	NM_001164106	54456	Hs.62880	NM_018995	ENSG00000073146	MOV10L1	CHAMP|DJ402G11.8	Mov10 RISC complex RNA helicase like 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr22-3291	chr22	51113155	51114482	+	19.8	1327	"intron (NM_033517, intron 2 of 21)"	(TG)n|Simple_repeat|Simple_repeat	748	NM_033517	85358	Hs.149035	NM_033517	ENSG00000251322	SHANK3	DEL22q13.3|PROSAP2|PSAP2|SCZD15|SPANK-2	SH3 and multiple ankyrin repeat domains 3	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr22-3293	chr22	17466257	17467257	+	15.4	1000	"intron (NM_001037814, intron 3 of 9)"	"intron (NM_001037814, intron 3 of 9)"	22355	NM_001037814	128954	Hs.434113	NM_001037814	ENSG00000215568	GAB4	-	GRB2 associated binding protein family member 4	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr22-3294	chr22	17837593	17838593	+	15.4	1000	Intergenic	AluSg|SINE|Alu	-2746	NM_001290046	27443	Hs.231895	NM_031413	ENSG00000099954	CECR2	-	"CECR2, histone acetyl-lysine reader"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr22-3303	chr22	18935178	18936178	+	15.4	1000	Intergenic	Intergenic	-11612	NM_016335	5625	Hs.517352	NM_016335	ENSG00000100033	PRODH	HSPOX2|PIG6|POX|PRODH1|PRODH2|TP53I6	proline dehydrogenase 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr22-332	chr22	37954959	37957266	+	39	2307	promoter-TSS (NM_152243)	promoter-TSS (NM_152243)	-359	NM_152243	11135	Hs.225356	NM_152243	ENSG00000128283	CDC42EP1	BORG5|CEP1|MSE55	CDC42 effector protein 1	protein-coding	39.04	3.88	10.06185567	5.77E-20
chr22-3320	chr22	19985717	19991057	+	85.1	5340	"intron (NM_001670, intron 2 of 19)"	MLT1A0|LTR|ERVL-MaLR	15922	NM_001670	421	Hs.713616	NM_001670	ENSG00000099889	ARVCF	-	armadillo repeat gene deleted in velocardiofacial syndrome	protein-coding	85.13	17.47	4.872925014	2.25E-24
chr22-3324	chr22	20154019	20155299	+	17.9	1280	Intergenic	AluJr|SINE|Alu	-17228	NM_001243537	388849	Hs.454905	NM_001243537	ENSG00000234409	CCDC188	-	coiled-coil domain containing 188	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr22-3325	chr22	20215585	20222634	+	156.8	7049	Intergenic	Intergenic	17625	NR_031618	100302118		NR_031618	ENSG00000221039	MIR1286	MIRN1286|hsa-mir-1286|mir-1286	microRNA 1286	ncRNA	156.82	23.78	6.594617325	6.72E-57
chr22-3329	chr22	20788721	20792661	+	81.9	3940	"intron (NM_182895, intron 1 of 13)"	CpG	1455	NM_182895	91179	Hs.474251	NM_153334	ENSG00000244486	SCARF2	NSR1|SREC-II|SREC2|SRECRP-1|VDEGS	scavenger receptor class F member 2	protein-coding	81.93	7.77	10.54440154	2.59E-42
chr22-3331	chr22	21316814	21321640	+	98.6	4826	promoter-TSS (NM_001018060)	promoter-TSS (NM_001018060)	-191	NM_001018060	150209	Hs.723246	NM_144704	ENSG00000183773	AIFM3	AIFL	"apoptosis inducing factor, mitochondria associated 3"	protein-coding	98.57	17.96	5.48830735	1.42E-31
chr22-3347	chr22	22891440	22892440	+	15.4	1000	"intron (NM_206956, intron 5 of 5)"	"intron (NM_206956, intron 5 of 5)"	4663	NM_001318127	23532	Hs.30743	NM_006115	ENSG00000185686	PRAME	CT130|MAPE|OIP-4|OIP4	preferentially expressed antigen in melanoma	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr22-3352	chr22	22999162	23000162	+	16	1000	Intergenic	AluSx|SINE|Alu	10880	NM_199127	91227	Hs.450000	NM_080839	ENSG00000100121	GGTLC2	GGTL4	gamma-glutamyltransferase light chain 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr22-3358	chr22	23115358	23116623	+	21.1	1265	Intergenic	Intergenic	-49280	NR_030755	723778		NR_030755	ENSG00000278196	MIR650	MIRN650|hsa-mir-650	microRNA 650	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr22-336	chr22	40105281	40109602	+	78.7	4321	Intergenic	Intergenic	140683	NM_001003406	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding	78.73	9.71	8.108135942	5.35E-34
chr22-3362	chr22	23253801	23254801	+	15.4	1000	Intergenic	Intergenic	24341	NM_001178126	100423062	Hs.449585	NM_001178126	ENSG00000254709	IGLL5	IGL|IGLV|VL-MAR	immunoglobulin lambda like polypeptide 5	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr22-3366	chr22	23451168	23452446	+	18.6	1278	"intron (NM_002073, intron 2 of 2)"	"intron (NM_002073, intron 2 of 2)"	32434	NM_014433	27156	Hs.526920	NM_014433	ENSG00000100218	RSPH14	RTDR1	radial spoke head 14 homolog	protein-coding	18.56	1.46	12.71232877	2.41E-11
chr22-3374	chr22	25102501	25105944	+	54.4	3443	Intergenic	L1M4|LINE|L1	-49108	NR_024593	646074	Hs.531306	NM_001025230		POM121L10P	-	"POM121 transmembrane nucleoporin like 10, pseudogene"	pseudo	54.41	6.8	8.001470588	1.13E-23
chr22-3376	chr22	25145328	25146328	+	15.4	1000	"intron (NM_001008496, intron 9 of 20)"	"intron (NM_001008496, intron 9 of 20)"	-14640	NR_001283	7152	Hs.381281	NR_001283		TOP1P2	-	topoisomerase (DNA) I pseudogene 2	pseudo	15.36	1.94	7.917525773	7.67E-08
chr22-3379	chr22	25228812	25230076	+	19.8	1264	"intron (NM_133454, intron 2 of 24)"	AluSc|SINE|Alu	27256	NM_133454	129049	Hs.474397	NM_133454	ENSG00000167037	SGSM1	RUTBC2	small G protein signaling modulator 1	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr22-3392	chr22	25671657	25672657	+	16	1000	Intergenic	AluY|SINE|Alu	-42067	NR_029395	91353	Hs.651077	NM_001013618		IGLL3P	16.1|IGLL3	"immunoglobulin lambda like polypeptide 3, pseudogene"	pseudo	16	2.91	5.498281787	4.98E-06
chr22-3399	chr22	26433166	26434921	+	25.6	1755	Intergenic	MIRc|SINE|MIR	-131397	NM_001184773	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	25.6	4.85	5.278350515	4.26E-09
chr22-3407	chr22	26503365	26504365	+	15.4	1000	Intergenic	MLT1G3|LTR|ERVL-MaLR	-61575	NM_001184773	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr22-3410	chr22	26564465	26567075	+	57	2610	"intron (NM_001184773, intron 1 of 16)"	CpG	330	NM_001184777	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	56.97	7.77	7.332046332	2.84E-23
chr22-3415	chr22	26671462	26672462	+	16	1000	"intron (NM_001184773, intron 1 of 16)"	MIRb|SINE|MIR	106522	NM_001184777	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	16	3.88	4.12371134	7.91E-05
chr22-3419	chr22	26761739	26762739	+	14.1	1000	"intron (NM_001184775, intron 13 of 15)"	AluSz|SINE|Alu	-63041	NM_020437	57168	Hs.567547	NM_020437	ENSG00000128203	ASPHD2	-	aspartate beta-hydroxylase domain containing 2	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr22-3420	chr22	26790023	26791954	+	28.2	1931	Intergenic	Intergenic	-34292	NM_020437	57168	Hs.567547	NM_020437	ENSG00000128203	ASPHD2	-	aspartate beta-hydroxylase domain containing 2	protein-coding	28.16	3.4	8.282352941	1.50E-13
chr22-3427	chr22	27479554	27480554	+	15.4	1000	Intergenic	AluJo|SINE|Alu	-23574	NM_001318329	284898	Hs.350813	NM_001318329		LOC284898	-	uncharacterized LOC284898	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr22-3428	chr22	27511380	27512649	+	17.3	1269	Intergenic	MER119|DNA|hAT-Charlie	-55534	NM_001318329	284898	Hs.350813	NM_001318329		LOC284898	-	uncharacterized LOC284898	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr22-3430	chr22	27637917	27639610	+	25	1693	Intergenic	Intergenic	55285	NM_001318392	105372977	Hs.743180	NM_001318392		LOC105372977	-	uncharacterized LOC105372977	protein-coding	24.96	5.34	4.674157303	9.72E-08
chr22-3442	chr22	27991201	27992201	+	16	1000	Intergenic	Intergenic	205785	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	"MN1 proto-oncogene, transcriptional regulator"	protein-coding	16	1.94	8.24742268	7.67E-08
chr22-3451	chr22	28956121	28957121	+	15.4	1000	"intron (NM_001145418, intron 2 of 22)"	L2a|LINE|L2	100764	NR_106713	102466081		NR_106713	ENSG00000276162	MIR5739	hsa-mir-5739	microRNA 5739	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr22-3453	chr22	29021068	29022429	+	23	1361	"intron (NM_001145418, intron 2 of 22)"	L1MEa|LINE|L1	54105	NM_001145418	23331	Hs.387856	NM_015281	ENSG00000100154	TTC28	TPRBK	tetratricopeptide repeat domain 28	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr22-3460	chr22	29320323	29322979	+	42.9	2656	"intron (NM_032173, intron 1 of 8)"	L1ME2z|LINE|L1	8274	NM_032173	84133	Hs.604200	NM_032173	ENSG00000183579	ZNRF3	BK747E2.3|RNF203	zinc and ring finger 3	protein-coding	42.89	10.68	4.015917603	9.13E-11
chr22-3478	chr22	29531591	29532591	+	16	1000	"intron (NM_032045, intron 5 of 9)"	AluSx|SINE|Alu	63025	NM_001039570	83999	Hs.229335	NM_032045	ENSG00000183762	KREMEN1	KREMEN|KRM1	kringle containing transmembrane protein 1	protein-coding	16	0	16.4818808	1.26E-14
chr22-3481	chr22	29547188	29548188	+	14.7	1000	"intron (NM_032045, intron 9 of 9)"	MER58B|DNA|hAT-Charlie	-54213	NM_133455	129080	Hs.289106	NM_133455	ENSG00000186998	EMID1	EMI5|EMU1	EMI domain containing 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr22-3484	chr22	29861928	29862928	+	15.4	1000	Intergenic	Intergenic	-13753	NM_021076	4744	Hs.198760	NM_021076	ENSG00000100285	NEFH	CMT2CC|NFH	neurofilament heavy	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr22-3485	chr22	31518893	31519893	+	15.4	1000	"intron (NM_001284287, intron 1 of 11)"	MIR3|SINE|MIR	484	NM_001284289	27124	Hs.517549	NM_014422	ENSG00000185133	INPP5J	INPP5|PIB5PA|PIPP	inositol polyphosphate-5-phosphatase J	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr22-349	chr22	44942071	44948189	+	90.9	6118	Intergenic	Intergenic	-20090	NR_028411	388910	Hs.332685	NM_001012986	ENSG00000187012	LINC00207	NCRNA00207	long intergenic non-protein coding RNA 207	ncRNA	90.89	20.87	4.355055103	1.49E-23
chr22-3501	chr22	32939179	32940179	+	16	1000	"intron (NM_001135774, intron 7 of 13)"	MLT1J|LTR|ERVL-MaLR	68455	NM_001033024	25793	Hs.5912	NM_012179	ENSG00000100225	FBXO7	FBX|FBX07|FBX7|PARK15|PKPS	F-box protein 7	protein-coding	16	3.88	4.12371134	7.91E-05
chr22-3509	chr22	33312751	33314051	+	24.3	1300	"intron (NM_133633, intron 3 of 11)"	"intron (NM_133633, intron 3 of 11)"	89405	NM_133633	8224	Hs.608750	NM_003490	ENSG00000185666	SYN3	-	synapsin III	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr22-3514	chr22	33699547	33700547	+	16	1000	"intron (NM_004737, intron 13 of 15)"	MIR3|SINE|MIR	132608	NR_039921	100616295		NR_039921	ENSG00000266012	MIR4764	-	microRNA 4764	ncRNA	16	3.88	4.12371134	7.91E-05
chr22-3518	chr22	33878915	33880173	+	18.6	1258	"intron (NM_004737, intron 7 of 15)"	"intron (NM_004737, intron 7 of 15)"	-46889	NR_039921	100616295		NR_039921	ENSG00000266012	MIR4764	-	microRNA 4764	ncRNA	18.56	0.97	19.13402062	1.12E-13
chr22-3519	chr22	33900460	33901979	+	25.6	1519	"intron (NM_004737, intron 7 of 15)"	"intron (NM_004737, intron 7 of 15)"	-68564	NR_039921	100616295		NR_039921	ENSG00000266012	MIR4764	-	microRNA 4764	ncRNA	25.6	5.82	4.39862543	7.99E-08
chr22-3526	chr22	35963429	35968486	+	83.2	5057	Intergenic	Intergenic	28605	NM_014310	23551	Hs.474711	NM_014310	ENSG00000100302	RASD2	MGC:4834|Rhes|TEM2	RASD family member 2	protein-coding	83.21	13.59	6.122884474	1.73E-29
chr22-3542	chr22	36609622	36613661	+	60.8	4039	Intergenic	MER4C|LTR|ERV1	-10762	NM_030643	80832	Hs.115099	NM_030643	ENSG00000100336	APOL4	APOL-IV|APOLIV	apolipoprotein L4	protein-coding	60.81	11.16	5.448924731	1.24E-19
chr22-3543	chr22	36642877	36644428	+	23.7	1551	Intergenic	PRIMA41-int|LTR|ERV1	-5465	NM_001136540	8542	Hs.114309	NM_003661	ENSG00000100342	APOL1	APO-L|APOL|APOL-I|FSGS4	apolipoprotein L1	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr22-3545	chr22	36938040	36939379	+	17.9	1339	Intergenic	AluSx1|SINE|Alu	-13432	NM_003753	8664	Hs.55682	NM_003753	ENSG00000100353	EIF3D	EIF3S7|eIF3-p66|eIF3-zeta	eukaryotic translation initiation factor 3 subunit D	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr22-3553	chr22	37004073	37008325	+	76.2	4252	"intron (NM_006078, intron 1 of 3)"	"intron (NM_006078, intron 1 of 3)"	-80922	NM_003753	8664	Hs.55682	NM_003753	ENSG00000100353	EIF3D	EIF3S7|eIF3-p66|eIF3-zeta	eukaryotic translation initiation factor 3 subunit D	protein-coding	76.17	16.02	4.754681648	1.85E-21
chr22-3554	chr22	37023369	37024369	+	16	1000	"intron (NM_006078, intron 1 of 3)"	"intron (NM_006078, intron 1 of 3)"	74821	NM_006078	10369	Hs.146766	NM_006078	ENSG00000166862	CACNG2	MRD10	calcium voltage-gated channel auxiliary subunit gamma 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr22-3567	chr22	37219238	37220238	+	16	1000	Intergenic	MIRc|SINE|MIR	-4221	NM_002854	5816	Hs.295449	NM_002854	ENSG00000100362	PVALB	D22S749	parvalbumin	protein-coding	16	2.91	5.498281787	4.98E-06
chr22-3573	chr22	37273493	37274493	+	16	1000	TTS (NM_013416)	TTS (NM_013416)	16963	NM_000631	4689	Hs.474781	NM_000631	ENSG00000100365	NCF4	CGD3|NCF|P40PHOX|SH3PXD4	neutrophil cytosolic factor 4	protein-coding	16	0	16.4818808	1.26E-14
chr22-3582	chr22	37350621	37351621	+	14.7	1000	Intergenic	Intergenic	-10168	NR_038954	100506241	Hs.640023	NR_038954	ENSG00000215403	LL22NC01-81G9.3	-	uncharacterized protein FLJ39582-like	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr22-3584	chr22	37365185	37368403	+	50.6	3218	Intergenic	Intergenic	5505	NR_038954	100506241	Hs.640023	NR_038954	ENSG00000215403	LL22NC01-81G9.3	-	uncharacterized protein FLJ39582-like	ncRNA	50.57	7.77	6.508365508	4.59E-19
chr22-3586	chr22	37385920	37386920	+	16	1000	TTS (NM_001163857)	TTS (NM_001163857)	17457	NM_001163857	339669	Hs.124502	NM_178552	ENSG00000185264	TEX33	C22orf33|EAN57|cE81G9.2	testis expressed 33	protein-coding	16	3.88	4.12371134	7.91E-05
chr22-3587	chr22	37396312	37404293	+	122.9	7981	"intron (NM_178552, intron 1 of 5)"	"intron (NM_178552, intron 1 of 5)"	3575	NM_001163857	339669	Hs.124502	NM_178552	ENSG00000185264	TEX33	C22orf33|EAN57|cE81G9.2	testis expressed 33	protein-coding	122.9	28.64	4.291201117	9.34E-31
chr22-3595	chr22	37510957	37512898	+	34.6	1941	Intergenic	MLT1C|LTR|ERVL-MaLR	-6324	NM_001289000	164656	Hs.370885	NM_153609	ENSG00000187045	TMPRSS6	IRIDA	"transmembrane protease, serine 6"	protein-coding	34.56	6.31	5.477020602	4.08E-12
chr22-3598	chr22	37549343	37550343	+	15.4	1000	"intron (NM_001346222, intron 1 of 9)"	"intron (NM_001346222, intron 1 of 9)"	-3813	NM_000878	3560	Hs.474787	NM_000878	ENSG00000100385	IL2RB	CD122|IL15RB|P70-75	interleukin 2 receptor subunit beta	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr22-3607	chr22	37790397	37791397	+	15.4	1000	"intron (NM_052906, intron 2 of 2)"	AluSg|SINE|Alu	32608	NM_052906	114794	Hs.344170	NM_052906	ENSG00000166897	ELFN2	LRRC62|PPP1R29	extracellular leucine rich repeat and fibronectin type III domain containing 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr22-3611	chr22	37891370	37892684	+	23	1314	"intron (NM_014550, intron 13 of 19)"	"intron (NM_014550, intron 13 of 19)"	-9549	NM_002405	4242	Hs.517603	NM_002405	ENSG00000100060	MFNG	-	MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	protein-coding	23.04	5.34	4.314606742	4.49E-07
chr22-3618	chr22	38828320	38829320	+	14.7	1000	"intron (NM_152868, intron 1 of 1)"	AluSz6|SINE|Alu	11213	NM_004981	3761	Hs.32505	NM_004981	ENSG00000168135	KCNJ4	HIR|HIRK2|HRK1|IRK-3|IRK3|Kir2.3	potassium voltage-gated channel subfamily J member 4	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr22-3622	chr22	39238081	39244324	+	96.7	6243	Intergenic	Intergenic	-1185	NM_014293	23467	Hs.91622	NM_014293	ENSG00000221890	NPTXR	NPR	neuronal pentraxin receptor	protein-coding	96.65	15.05	6.42192691	6.87E-35
chr22-3625	chr22	39312812	39313812	+	15.4	1000	Intergenic	AluSx1|SINE|Alu	-40215	NM_145699	200315	Hs.226307	NM_145699	ENSG00000128383	APOBEC3A	A3A|ARP3|PHRBN|bK150C2.1	apolipoprotein B mRNA editing enzyme catalytic subunit 3A	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr22-3628	chr22	39498651	39501815	+	55	3164	TTS (NM_001166003)	TTS (NM_001166003)	7004	NM_001166003	164668	Hs.440515	NM_181773	ENSG00000100298	APOBEC3H	A3H|ARP-10|ARP10	apolipoprotein B mRNA editing enzyme catalytic subunit 3H	protein-coding	55.05	13.59	4.050772627	6.99E-14
chr22-3641	chr22	39976379	39977379	+	15.4	1000	"intron (NM_021096, intron 1 of 36)"	L2a|LINE|L2	10121	NM_001003406	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr22-3645	chr22	40032015	40033367	+	26.9	1352	"intron (NM_021096, intron 5 of 36)"	"intron (NM_021096, intron 5 of 36)"	65933	NM_001003406	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding	26.88	3.4	7.905882353	1.25E-12
chr22-3648	chr22	40071221	40072221	+	15.4	1000	"intron (NM_021096, intron 29 of 36)"	L2b|LINE|L2	104963	NM_001003406	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr22-3652	chr22	40128376	40132551	+	44.8	4175	Intergenic	L1PA8|LINE|L1	159331	NM_152512	150350	Hs.474869	NM_152512	ENSG00000176177	ENTHD1	CACNA1I|dJ370M22.3	ENTH domain containing 1	protein-coding	44.81	10.68	4.195692884	5.25E-12
chr22-3661	chr22	42757679	42765613	+	183.1	7934	"intron (NR_120595, intron 1 of 1)"	"intron (NR_120595, intron 1 of 1)"	3568	NR_120597	102723775	Hs.335413	NR_120595	ENSG00000229891	LINC01315	lnc-C22orf32-1	long intergenic non-protein coding RNA 1315	ncRNA	183.06	24.27	7.542645241	9.24E-74
chr22-3665	chr22	42821899	42822899	+	15.4	1000	"intron (NM_145912, intron 1 of 5)"	"intron (NM_145912, intron 1 of 5)"	6002	NM_001318323	150372	Hs.436677	NM_145912	ENSG00000235568	NFAM1	CNAIP	NFAT activating protein with ITAM motif 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr22-3674	chr22	43640082	43650114	+	178.6	10032	"intron (NM_173050, intron 6 of 21)"	"intron (NM_173050, intron 6 of 21)"	-26850	NR_134582	101927447	Hs.621227	NR_134582	ENSG00000203527	LOC101927447	-	uncharacterized LOC101927447	ncRNA	178.58	17.47	10.22209502	8.23E-88
chr22-3692	chr22	43746035	43747560	+	23	1525	Intergenic	AluSp|SINE|Alu	-7403	NM_173050	80274	Hs.133995	NM_173050	ENSG00000159307	SCUBE1	-	"signal peptide, CUB domain and EGF like domain containing 1"	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr22-3704	chr22	44075107	44076107	+	16	1000	"intron (NM_198856, intron 10 of 29)"	L1MB7|LINE|L1	132610	NM_022785	64800	Hs.658996	NM_022785	ENSG00000186976	EFCAB6	DJBP|HSCBCIP1|dJ185D5.1	EF-hand calcium binding domain 6	protein-coding	16	0.97	16.49484536	3.54E-11
chr22-3709	chr22	44235702	44241155	+	83.2	5453	"intron (NM_014351, intron 1 of 6)"	L1ME3|LINE|L1	19950	NM_014351	25830	Hs.189810	NM_014351	ENSG00000130540	SULT4A1	BR-STL-1|BRSTL1|DJ388M5.3|NST|SULTX3|hBR-STL-1	sulfotransferase family 4A member 1	protein-coding	83.21	12.62	6.593502377	2.94E-31
chr22-3711	chr22	44245718	44246718	+	14.7	1000	"intron (NM_014351, intron 1 of 6)"	HAL1|LINE|L1	12160	NM_014351	25830	Hs.189810	NM_014351	ENSG00000130540	SULT4A1	BR-STL-1|BRSTL1|DJ388M5.3|NST|SULTX3|hBR-STL-1	sulfotransferase family 4A member 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr22-3717	chr22	44456318	44457318	+	16	1000	"intron (NM_001243386, intron 1 of 11)"	MER82|DNA|TcMar-Tigger	-8179	NM_001243385	29780	Hs.475074	NM_013327	ENSG00000188677	PARVB	CGI-56	parvin beta	protein-coding	16	3.4	4.705882353	2.25E-05
chr22-3727	chr22	44715843	44716843	+	15.4	1000	Intergenic	Intergenic	-7612	NM_001099294	85352	Hs.6829	NM_001099294	ENSG00000138944	KIAA1644	-	KIAA1644	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr22-3729	chr22	44791226	44792226	+	16.6	1000	Intergenic	L1M6|LINE|L1	-47481	NR_109966	101927526	Hs.339290	NR_109966	ENSG00000232655	LINC01656	-	long intergenic non-protein coding RNA 1656	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr22-3738	chr22	44988417	44989417	+	15.4	1000	Intergenic	Intergenic	23697	NR_028409	388910	Hs.332685	NM_001012986	ENSG00000187012	LINC00207	NCRNA00207	long intergenic non-protein coding RNA 207	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr22-3748	chr22	45211709	45212709	+	14.7	1000	"intron (NM_181334, intron 8 of 14)"	"intron (NM_181334, intron 8 of 14)"	63771	NM_001017526	23779	Hs.102336	NM_181335	ENSG00000241484	ARHGAP8	BPGAP1|PP610	Rho GTPase activating protein 8	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr22-3750	chr22	45240312	45241683	+	19.8	1371	"intron (NM_181334, intron 10 of 14)"	"intron (NM_181334, intron 10 of 14)"	92559	NM_001017526	23779	Hs.102336	NM_181335	ENSG00000241484	ARHGAP8	BPGAP1|PP610	Rho GTPase activating protein 8	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr22-3753	chr22	45487100	45488100	+	15.4	1000	Intergenic	Intergenic	60865	NR_038957	100506714	Hs.189902	NR_038956		NUP50-AS1	-	NUP50 antisense RNA 1 (head to head)	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr22-3759	chr22	45843823	45845159	+	19.2	1336	Intergenic	Intergenic	34919	NM_015653	26150	Hs.475110	NM_015653	ENSG00000128408	RIBC2	C22orf11|TRIB	RIB43A domain with coiled-coils 2	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr22-3764	chr22	45933650	45934650	+	14.7	1000	"intron (NM_006486, intron 8 of 16)"	"intron (NM_006486, intron 8 of 16)"	35431	NM_001996	2192	Hs.24601	NM_001996	ENSG00000077942	FBLN1	FBLN|FIBL1	fibulin 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr22-3768	chr22	46031269	46032269	+	16	1000	Intergenic	AluJb|SINE|Alu	-30242	NR_131244	100506737	Hs.517692	NR_131244	ENSG00000238120	LINC01589	TCONS_00029353	long intergenic non-protein coding RNA 1589	ncRNA	16	3.88	4.12371134	7.91E-05
chr22-3769	chr22	46308976	46309976	+	15.4	1000	Intergenic	Intergenic	63532	NM_058238	7477	Hs.512714	NM_058238	ENSG00000188064	WNT7B	-	Wnt family member 7B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr22-3770	chr22	46317893	46324990	+	114.6	7097	"intron (NM_058238, intron 3 of 3)"	"intron (NM_058238, intron 3 of 3)"	51567	NM_058238	7477	Hs.512714	NM_058238	ENSG00000188064	WNT7B	-	Wnt family member 7B	protein-coding	114.57	18.44	6.213123644	5.20E-40
chr22-3773	chr22	46335891	46337568	+	28.2	1677	"intron (NM_058238, intron 2 of 3)"	L2a|LINE|L2	36279	NM_058238	7477	Hs.512714	NM_058238	ENSG00000188064	WNT7B	-	Wnt family member 7B	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr22-3775	chr22	46347017	46351369	+	72.3	4352	"intron (NM_058238, intron 1 of 3)"	"intron (NM_058238, intron 1 of 3)"	23815	NM_058238	7477	Hs.512714	NM_058238	ENSG00000188064	WNT7B	-	Wnt family member 7B	protein-coding	72.33	13.59	5.322295806	1.21E-22
chr22-3780	chr22	46445480	46449956	+	76.8	4476	"exon (NM_018280, exon 2 of 2)"	"exon (NM_018280, exon 2 of 2)"	-2008	NR_027034	150381	Hs.659113	NR_027034		PRR34-AS1	-	PRR34 antisense RNA 1	ncRNA	76.81	5.82	13.1975945	4.14E-45
chr22-3787	chr22	46833274	46836114	+	42.2	2840	"intron (NM_014246, intron 3 of 34)"	AluSx|SINE|Alu	98373	NM_014246	9620	Hs.252387	NM_014246	ENSG00000075275	CELSR1	ADGRC1|CDHF9|FMI2|HFMI2|ME2	cadherin EGF LAG seven-pass G-type receptor 1	protein-coding	42.25	6.8	6.213235294	5.66E-16
chr22-3803	chr22	47797272	47798683	+	21.1	1411	Intergenic	Intergenic	56656	NR_144462	339685	Hs.434351	NR_038922		LOC339685	-	uncharacterized LOC339685	ncRNA	21.12	0.97	21.77319588	2.68E-16
chr22-3808	chr22	47820183	47821183	+	15.4	1000	Intergenic	MLT2D|LTR|ERVL	62177	NR_109967	101927722	Hs.589927	NR_109967	ENSG00000218357	LINC01644	LL22NC03-75H12.2	long intergenic non-protein coding RNA 1644	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr22-3825	chr22	48245508	48246508	+	15.4	1000	"intron (NR_122046, intron 8 of 8)"	"intron (NR_122046, intron 8 of 8)"	218585	NR_122046	284930	Hs.407567	NR_122046	ENSG00000224271	LOC284930	-	uncharacterized LOC284930	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr22-3830	chr22	48463850	48465135	+	17.9	1285	Intergenic	MLT1D|LTR|ERVL-MaLR	-205684	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	17.92	1.46	12.2739726	2.41E-11
chr22-3834	chr22	48568005	48569260	+	16.6	1255	Intergenic	Intergenic	-101544	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr22-3838	chr22	48672349	48673349	+	15.4	1000	Intergenic	Intergenic	2673	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr22-3841	chr22	48726874	48727874	+	15.4	1000	Intergenic	Intergenic	57198	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr22-3853	chr22	49080174	49081174	+	16	1000	"intron (NM_015381, intron 2 of 3)"	"intron (NM_015381, intron 2 of 3)"	-95433	NR_039761	100616415		NR_039761	ENSG00000266887	MIR4535	-	microRNA 4535	ncRNA	16	0.97	16.49484536	3.54E-11
chr22-3854	chr22	49087185	49088185	+	15.4	1000	"intron (NM_015381, intron 2 of 3)"	"intron (NM_015381, intron 2 of 3)"	-88422	NR_039761	100616415		NR_039761	ENSG00000266887	MIR4535	-	microRNA 4535	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr22-387	chr22	24190645	24191899	+	25.6	1254	Intergenic	Intergenic	-7618	NR_104248	66035	Hs.661910	NM_030807	ENSG00000133460	SLC2A11	GLUT10|GLUT11	solute carrier family 2 member 11	protein-coding	25.6	5.82	4.39862543	7.99E-08
chr22-3870	chr22	49427056	49429444	+	36.5	2388	Intergenic	Intergenic	165668	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	36.48	5.34	6.831460674	1.37E-14
chr22-3873	chr22	49452565	49453565	+	15.4	1000	Intergenic	Intergenic	190483	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr22-388	chr22	25465505	25469582	+	66.6	4077	"intron (NM_001145206, intron 4 of 10)"	"intron (NM_001145206, intron 4 of 10)"	41116	NR_038941	100128531	Hs.662126	NR_038941	ENSG00000203280	LOC100128531	-	uncharacterized LOC100128531	ncRNA	66.57	15.53	4.286542176	2.01E-17
chr22-3886	chr22	49795375	49796375	+	14.1	1000	Intergenic	Intergenic	141239	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr22-389	chr22	26452265	26453824	+	29.4	1559	Intergenic	Intergenic	-112396	NM_001184773	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	29.44	7.28	4.043956044	3.95E-08
chr22-3896	chr22	50070957	50073309	+	45.4	2352	Intergenic	Intergenic	-20943	NR_110523	348645	Hs.133159	NM_198851	ENSG00000188511	C22orf34	-	chromosome 22 open reading frame 34	protein-coding	45.45	9.22	4.929501085	9.30E-14
chr22-390	chr22	27348624	27349624	+	22.4	1000	Intergenic	Intergenic	49869	NR_110540	101929539	Hs.517505	NR_110540	ENSG00000235271	LINC01422	-	long intergenic non-protein coding RNA 1422	ncRNA	22.4	3.88	5.773195876	2.53E-08
chr22-3908	chr22	51092172	51093763	+	28.2	1591	Intergenic	AluSz|SINE|Alu	-20103	NM_033517	85358	Hs.149035	NM_033517	ENSG00000251322	SHANK3	DEL22q13.3|PROSAP2|PSAP2|SCZD15|SPANK-2	SH3 and multiple ankyrin repeat domains 3	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr22-392	chr22	27979212	27980469	+	23	1257	Intergenic	Intergenic	217646	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	"MN1 proto-oncogene, transcriptional regulator"	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr22-3940	chr22	19714885	19718046	+	55.7	3161	Intergenic	Intergenic	5399	NM_000407	2812	Hs.283743	NM_000407	ENSG00000203618	GP1BB	BDPLT1|BS|CD42C|GPIBB|GPIbbeta	glycoprotein Ib platelet beta subunit	protein-coding	55.69	11.16	4.990143369	9.34E-17
chr22-3941	chr22	19730509	19731509	+	15.4	1000	Intergenic	Intergenic	-13217	NM_080646	6899	Hs.173984	NM_005992	ENSG00000184058	TBX1	CAFS|CATCH22|CTHM|DGCR|DGS|DORV|TBX1C|TGA|VCF|VCFS	T-box 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr22-3949	chr22	20162277	20163277	+	14.7	1000	Intergenic	MLT1H1|LTR|ERVL-MaLR	-25346	NM_001243537	388849	Hs.454905	NM_001243537	ENSG00000234409	CCDC188	-	coiled-coil domain containing 188	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr22-3950	chr22	20186441	20187441	+	14.1	1000	"intron (NR_038460, intron 3 of 3)"	(TCCA)n|Simple_repeat|Simple_repeat	5500	NR_038460	284865	Hs.638498	NR_038460	ENSG00000249923	LOC284865	-	uncharacterized LOC284865	ncRNA	14.08	1.46	9.643835616	3.66E-08
chr22-3958	chr22	20957987	20959262	+	18.6	1275	Intergenic	Intergenic	-85219	NR_024592	266697	Hs.558711	NR_024592		POM121L4P	-	"POM121 transmembrane nucleoporin like 4, pseudogene"	pseudo	18.56	3.4	5.458823529	8.42E-07
chr22-3960	chr22	20981457	20982457	+	14.7	1000	Intergenic	Intergenic	-61886	NR_024592	266697	Hs.558711	NR_024592		POM121L4P	-	"POM121 transmembrane nucleoporin like 4, pseudogene"	pseudo	14.72	2.91	5.058419244	2.67E-05
chr22-3961	chr22	20984371	20985951	+	21.1	1580	Intergenic	Intergenic	-58682	NR_024592	266697	Hs.558711	NR_024592		POM121L4P	-	"POM121 transmembrane nucleoporin like 4, pseudogene"	pseudo	21.12	4.37	4.832951945	6.64E-07
chr22-397	chr22	29824840	29825840	+	21.8	1000	Intergenic	AluJr|SINE|Alu	-9232	NM_021026	5988	Hs.648249	NM_021026	ENSG00000128250	RFPL1	RNF78	ret finger protein like 1	protein-coding	21.76	2.43	8.95473251	2.49E-11
chr22-3977	chr22	22442985	22443985	+	13.4	1000	Intergenic	Intergenic	-45153	NR_135291	649179	Hs.553939	NR_135291	ENSG00000197549	PRAMENP	PRAMEF24P|PRAMEL	"PRAME N-terminal-like, pseudogene"	pseudo	13.44	2.43	5.530864198	2.99E-05
chr22-399	chr22	32918895	32920694	+	39	1799	"intron (NM_001135774, intron 12 of 13)"	Tigger1|DNA|TcMar-Tigger	48570	NM_001033024	25793	Hs.5912	NM_012179	ENSG00000100225	FBXO7	FBX|FBX07|FBX7|PARK15|PKPS	F-box protein 7	protein-coding	39.04	6.31	6.187004754	1.96E-14
chr22-3990	chr22	22878245	22879245	+	15.4	1000	Intergenic	AluSz|SINE|Alu	-4121	NM_080740	129025	Hs.178665	NM_080740	ENSG00000169548	ZNF280A	3'OY11.1|SUHW1|ZNF280|ZNF636	zinc finger protein 280A	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr22-4005	chr22	23238004	23239334	+	19.8	1330	TTS (NM_001178126)	TTS (NM_001178126)	8709	NM_001178126	100423062	Hs.449585	NM_001178126	ENSG00000254709	IGLL5	IGL|IGLV|VL-MAR	immunoglobulin lambda like polypeptide 5	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr22-4007	chr22	23249753	23250753	+	14.7	1000	Intergenic	Intergenic	20293	NM_001178126	100423062	Hs.449585	NM_001178126	ENSG00000254709	IGLL5	IGL|IGLV|VL-MAR	immunoglobulin lambda like polypeptide 5	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr22-4008	chr22	23278435	23282229	+	60.8	3794	Intergenic	Intergenic	50372	NM_001178126	100423062	Hs.449585	NM_001178126	ENSG00000254709	IGLL5	IGL|IGLV|VL-MAR	immunoglobulin lambda like polypeptide 5	protein-coding	60.81	9.71	6.26261586	5.26E-22
chr22-4025	chr22	23716372	23717879	+	24.3	1507	"intron (NR_037839, intron 2 of 6)"	"intron (NR_037839, intron 2 of 6)"	7188	NR_037839	649264	Hs.600549	NR_037839		CES5AP1	-	carboxylesterase 5A pseudogene 1	pseudo	24.32	4.37	5.565217391	4.38E-09
chr22-4029	chr22	24926524	24927524	+	15.4	1000	Intergenic	AluSx1|SINE|Alu	24251	NM_001284257	83606	Hs.9850	NM_031444	ENSG00000138867	GUCD1	C22orf13|LLN4	guanylyl cyclase domain containing 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr22-4037	chr22	25212574	25213574	+	14.1	1000	"intron (NM_133454, intron 2 of 24)"	MLT1K|LTR|ERVL-MaLR	10886	NM_133454	129049	Hs.474397	NM_133454	ENSG00000167037	SGSM1	RUTBC2	small G protein signaling modulator 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr22-4038	chr22	25220626	25221931	+	22.4	1305	"intron (NM_133454, intron 2 of 24)"	"intron (NM_133454, intron 2 of 24)"	19090	NM_133454	129049	Hs.474397	NM_133454	ENSG00000167037	SGSM1	RUTBC2	small G protein signaling modulator 1	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr22-4043	chr22	25320379	25322070	+	24.3	1691	"3' UTR (NM_001039948, exon 26 of 26)"	"3' UTR (NM_001039948, exon 26 of 26)"	14090	NM_001001663	255349	Hs.329040	NM_001001663	ENSG00000206069	TMEM211	bA9F11.1	transmembrane protein 211	protein-coding	24.32	1.94	12.53608247	5.33E-15
chr22-405	chr22	37426273	37427923	+	28.2	1650	Intergenic	MER20|DNA|hAT-Charlie	-10874	NM_001270483	7263	Hs.474783	NM_003312	ENSG00000128311	TST	RDS	thiosulfate sulfurtransferase	protein-coding	28.16	6.8	4.141176471	5.07E-08
chr22-4052	chr22	25570100	25571100	+	15.4	1000	"intron (NM_001145206, intron 6 of 10)"	MIRb|SINE|MIR	-25217	NM_004076	1417	Hs.533022	NM_004076	ENSG00000100053	CRYBB3	CATCN2|CRYB3|CTRCT22	crystallin beta B3	protein-coding	15.36	0	15.82260557	1.26E-14
chr22-4060	chr22	25782313	25783313	+	14.7	1000	Intergenic	Intergenic	-5269	NM_001135772	91355	Hs.634058	NM_182492	ENSG00000100068	LRP5L	-	LDL receptor related protein 5 like	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr22-4061	chr22	25795099	25796099	+	14.7	1000	Intergenic	AluY|SINE|Alu	-18055	NM_001135772	91355	Hs.634058	NM_182492	ENSG00000100068	LRP5L	-	LDL receptor related protein 5 like	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr22-4065	chr22	25808216	25811031	+	35.8	2815	Intergenic	MSTA-int|LTR|ERVL-MaLR	-32079	NM_001135772	91355	Hs.634058	NM_182492	ENSG00000100068	LRP5L	-	LDL receptor related protein 5 like	protein-coding	35.84	6.31	5.679873217	7.13E-13
chr22-4076	chr22	26439001	26440001	+	15.4	1000	Intergenic	AluSx3|SINE|Alu	-125939	NM_001184773	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr22-4078	chr22	26458345	26461747	+	62.1	3402	Intergenic	L2b|LINE|L2	-105394	NM_001184773	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	62.09	7.77	7.990990991	8.12E-27
chr22-4089	chr22	26633719	26634719	+	14.1	1000	"intron (NM_001184773, intron 1 of 16)"	"intron (NM_001184773, intron 1 of 16)"	68779	NM_001184777	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr22-409	chr22	37748113	37752453	+	76.8	4340	"non-coding (NR_110515, exon 1 of 2)"	"non-coding (NR_110515, exon 1 of 2)"	596	NR_110515	100506271	Hs.220558	NR_110515	ENSG00000237862	LOC100506271	-	uncharacterized LOC100506271	ncRNA	76.81	14.08	5.455255682	7.30E-25
chr22-4094	chr22	26709424	26710758	+	18.6	1334	"intron (NM_001184773, intron 9 of 16)"	(GA)n|Simple_repeat|Simple_repeat	-115189	NM_020437	57168	Hs.567547	NM_020437	ENSG00000128203	ASPHD2	-	aspartate beta-hydroxylase domain containing 2	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr22-4107	chr22	27415766	27416766	+	14.7	1000	Intergenic	G-rich|Low_complexity|Low_complexity	40214	NM_001318329	284898	Hs.350813	NM_001318329		LOC284898	-	uncharacterized LOC284898	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr22-4110	chr22	27476491	27477491	+	14.7	1000	Intergenic	LTR33|LTR|ERVL	-20511	NM_001318329	284898	Hs.350813	NM_001318329		LOC284898	-	uncharacterized LOC284898	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr22-4118	chr22	27717994	27718994	+	14.1	1000	Intergenic	Intergenic	11882	NR_134581	100507657	Hs.537371	NR_134581	ENSG00000226741	LOC100507657	-	uncharacterized LOC100507657	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr22-4133	chr22	28204781	28206110	+	21.1	1329	Intergenic	Intergenic	-7959	NM_002430	4330	Hs.268515	NM_002430	ENSG00000169184	MN1	MGCR|MGCR1|MGCR1-PEN|dJ353E16.2	"MN1 proto-oncogene, transcriptional regulator"	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr22-4138	chr22	29286135	29289755	+	62.1	3620	"intron (NM_001206998, intron 1 of 8)"	"intron (NM_001206998, intron 1 of 8)"	8190	NM_001206998	84133	Hs.604200	NM_032173	ENSG00000183579	ZNRF3	BK747E2.3|RNF203	zinc and ring finger 3	protein-coding	62.09	14.56	4.264423077	5.82E-16
chr22-4148	chr22	29353976	29360108	+	110.1	6132	"intron (NM_032173, intron 1 of 8)"	MLT1A1|LTR|ERVL-MaLR	43665	NM_032173	84133	Hs.604200	NM_032173	ENSG00000183579	ZNRF3	BK747E2.3|RNF203	zinc and ring finger 3	protein-coding	110.09	26.21	4.200305227	4.02E-27
chr22-4151	chr22	29389551	29390551	+	15.4	1000	"intron (NM_032173, intron 2 of 8)"	MIRb|SINE|MIR	37413	NR_046851	100874123	Hs.674708	NR_046851	ENSG00000177993	ZNRF3-AS1	-	ZNRF3 antisense RNA 1	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr22-4164	chr22	29493434	29497649	+	74.2	4215	"intron (NM_032045, intron 3 of 9)"	AluSc|SINE|Alu	26475	NM_001039570	83999	Hs.229335	NM_032045	ENSG00000183762	KREMEN1	KREMEN|KRM1	kringle containing transmembrane protein 1	protein-coding	74.25	15.53	4.781068899	2.13E-21
chr22-4165	chr22	29517316	29518316	+	14.1	1000	"intron (NM_032045, intron 4 of 9)"	L1MB7|LINE|L1	48750	NM_001039570	83999	Hs.229335	NM_032045	ENSG00000183762	KREMEN1	KREMEN|KRM1	kringle containing transmembrane protein 1	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr22-4168	chr22	29555518	29556518	+	14.7	1000	"intron (NM_032045, intron 9 of 9)"	L1PA16|LINE|L1	-45883	NM_133455	129080	Hs.289106	NM_133455	ENSG00000186998	EMID1	EMI5|EMU1	EMI domain containing 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr22-4172	chr22	30243554	30244554	+	15.4	1000	Intergenic	Intergenic	-9761	NM_032204	84164	Hs.731754	NM_032204	ENSG00000100325	ASCC2	ASC1p100|p100	activating signal cointegrator 1 complex subunit 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr22-4175	chr22	30872273	30876747	+	74.2	4474	Intergenic	LTR1D|LTR|ERV1	3233	NR_001580	376844	Hs.534651	NR_001580		SDC4P	-	syndecan 4 pseudogene	pseudo	74.25	16.5	4.5	3.42E-20
chr22-4178	chr22	30914039	30915039	+	14.7	1000	Intergenic	Intergenic	-12841	NM_001161368	284904	Hs.517541	NM_174977	ENSG00000133488	SEC14L4	TAP3	SEC14 like lipid binding 4	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr22-4182	chr22	31529777	31530777	+	15.4	1000	TTS (NM_015715)	TTS (NM_015715)	6316	NM_015715	50487	Hs.149623	NM_015715	ENSG00000100078	PLA2G3	GIII-SPLA2|SPLA2III|sPLA2-III	phospholipase A2 group III	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr22-4183	chr22	31773195	31774195	+	16.6	1000	Intergenic	L1MEf|LINE|L1	-21844	NM_004147	4733	Hs.115242	NM_004147	ENSG00000185721	DRG1	NEDD3	developmentally regulated GTP binding protein 1	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr22-4191	chr22	32514909	32515909	+	14.1	1000	Intergenic	Intergenic	-2555	NR_040114	23782	Hs.581098	NR_040114	ENSG00000234479	AP1B1P1	ADTB1L1|dJ127L4.2	adaptor related protein complex 1 beta 1 subunit pseudogene 1	pseudo	14.08	1.46	9.643835616	3.66E-08
chr22-4195	chr22	32719093	32720093	+	14.7	1000	Intergenic	Intergenic	-31279	NM_006604	10738	Hs.558455	NM_006604	ENSG00000128276	RFPL3	-	ret finger protein like 3	protein-coding	14.72	0	15.16333034	3.99E-13
chr22-4210	chr22	33226128	33227128	+	14.7	1000	"intron (NM_000362, intron 1 of 4)"	"intron (NM_000362, intron 1 of 4)"	29826	NM_000362	7078	Hs.644633	NM_000362	ENSG00000100234	TIMP3	HSMRK222|K222|K222TA2|SFD	TIMP metallopeptidase inhibitor 3	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr22-4212	chr22	33371985	33372985	+	14.7	1000	"intron (NM_001135774, intron 3 of 13)"	"intron (NM_001135774, intron 3 of 13)"	30321	NM_133633	8224	Hs.608750	NM_003490	ENSG00000185666	SYN3	-	synapsin III	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr22-4213	chr22	33423988	33424988	+	12.2	1000	"intron (NM_001135774, intron 1 of 13)"	"intron (NM_001135774, intron 1 of 13)"	-21682	NM_003490	8224	Hs.608750	NM_003490	ENSG00000185666	SYN3	-	synapsin III	protein-coding	12.16	0.97	12.53608247	1.07E-07
chr22-4220	chr22	33934596	33935596	+	15.4	1000	"intron (NM_004737, intron 7 of 15)"	"intron (NM_004737, intron 7 of 15)"	-102441	NR_039921	100616295		NR_039921	ENSG00000266012	MIR4764	-	microRNA 4764	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr22-4223	chr22	34325011	34326011	+	15.4	1000	Intergenic	Intergenic	-9095	NM_133642	9215	Hs.474667	NM_004737	ENSG00000133424	LARGE1	LARGE|MDC1D|MDDGA6|MDDGB6	LARGE xylosyl- and glucuronyltransferase 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr22-4224	chr22	34460167	34461167	+	15.4	1000	Intergenic	Intergenic	-144251	NM_133642	9215	Hs.474667	NM_004737	ENSG00000133424	LARGE1	LARGE|MDC1D|MDDGA6|MDDGB6	LARGE xylosyl- and glucuronyltransferase 1	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr22-4227	chr22	34981893	34982893	+	15.4	1000	Intergenic	Intergenic	411512	NR_138042	101926957	Hs.722607	NR_138042		ISX-AS1	-	ISX antisense RNA 1	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr22-4229	chr22	35031296	35032296	+	14.7	1000	Intergenic	AluSc5|SINE|Alu	362109	NR_138042	101926957	Hs.722607	NR_138042		ISX-AS1	-	ISX antisense RNA 1	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr22-4234	chr22	35308689	35309689	+	14.7	1000	"intron (NR_138042, intron 1 of 4)"	"intron (NR_138042, intron 1 of 4)"	84716	NR_138042	101926957	Hs.722607	NR_138042		ISX-AS1	-	ISX antisense RNA 1	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr22-4238	chr22	35980550	35981550	+	13.4	1000	Intergenic	AluSx1|SINE|Alu	32334	NM_005368	4151	Hs.517586	NM_005368	ENSG00000198125	MB	PVALB|myoglobgin	myoglobin	protein-coding	13.44	2.43	5.530864198	2.99E-05
chr22-4242	chr22	36428845	36429845	+	15.4	1000	Intergenic	AluY|SINE|Alu	-4760	NM_001082578	23543	Hs.282998	NM_014309	ENSG00000100320	RBFOX2	FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh	"RNA binding protein, fox-1 homolog 2"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr22-4244	chr22	36453832	36455082	+	19.8	1250	Intergenic	AluSc8|SINE|Alu	-29872	NM_001082578	23543	Hs.282998	NM_014309	ENSG00000100320	RBFOX2	FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh	"RNA binding protein, fox-1 homolog 2"	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr22-4246	chr22	36992309	36993309	+	14.7	1000	"intron (NM_006078, intron 1 of 3)"	"intron (NM_006078, intron 1 of 3)"	-67532	NM_003753	8664	Hs.55682	NM_003753	ENSG00000100353	EIF3D	EIF3S7|eIF3-p66|eIF3-zeta	eukaryotic translation initiation factor 3 subunit D	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr22-4248	chr22	36994838	36998645	+	57	3807	"intron (NM_006078, intron 1 of 3)"	AluSx|SINE|Alu	-71464	NM_003753	8664	Hs.55682	NM_003753	ENSG00000100353	EIF3D	EIF3S7|eIF3-p66|eIF3-zeta	eukaryotic translation initiation factor 3 subunit D	protein-coding	56.97	9.22	6.178958785	1.80E-20
chr22-4255	chr22	37034232	37035232	+	15.4	1000	"intron (NM_006078, intron 1 of 3)"	L2c|LINE|L2	63958	NM_006078	10369	Hs.146766	NM_006078	ENSG00000166862	CACNG2	MRD10	calcium voltage-gated channel auxiliary subunit gamma 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr22-4259	chr22	37078775	37079775	+	15.4	1000	"intron (NM_006078, intron 1 of 3)"	"intron (NM_006078, intron 1 of 3)"	19415	NM_006078	10369	Hs.146766	NM_006078	ENSG00000166862	CACNG2	MRD10	calcium voltage-gated channel auxiliary subunit gamma 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr22-4270	chr22	37333644	37334644	+	15.4	1000	"exon (NM_000395, exon 14 of 14)"	"exon (NM_000395, exon 14 of 14)"	24469	NM_000395	1439	Hs.592192	NM_000395	ENSG00000100368	CSF2RB	CD131|CDw131|IL3RB|IL5RB|SMDP5	colony stimulating factor 2 receptor beta common subunit	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr22-4288	chr22	37563066	37564066	+	15.4	1000	"intron (NM_001346222, intron 1 of 9)"	"intron (NM_001346222, intron 1 of 9)"	7530	NM_001346223	3560	Hs.474787	NM_000878	ENSG00000100385	IL2RB	CD122|IL15RB|P70-75	interleukin 2 receptor subunit beta	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr22-4294	chr22	37727650	37738485	+	175.4	10835	Intergenic	Intergenic	17812	NR_110515	100506271	Hs.220558	NR_110515	ENSG00000237862	LOC100506271	-	uncharacterized LOC100506271	ncRNA	175.38	30.58	5.735120994	6.55E-57
chr22-4301	chr22	37793196	37794196	+	14.7	1000	"intron (NM_052906, intron 2 of 2)"	"intron (NM_052906, intron 2 of 2)"	29809	NM_052906	114794	Hs.344170	NM_052906	ENSG00000166897	ELFN2	LRRC62|PPP1R29	extracellular leucine rich repeat and fibronectin type III domain containing 2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr22-4303	chr22	37811444	37817487	+	135.1	6043	"intron (NM_052906, intron 1 of 2)"	"intron (NM_052906, intron 1 of 2)"	9040	NM_052906	114794	Hs.344170	NM_052906	ENSG00000166897	ELFN2	LRRC62|PPP1R29	extracellular leucine rich repeat and fibronectin type III domain containing 2	protein-coding	135.06	18.44	7.324295011	2.66E-53
chr22-4306	chr22	37906343	37911166	+	59.5	4823	"intron (NM_014550, intron 3 of 19)"	"intron (NM_014550, intron 3 of 19)"	6456	NM_014550	29775	Hs.57973	NM_014550	ENSG00000100065	CARD10	BIMP1|CARMA3	caspase recruitment domain family member 10	protein-coding	59.53	9.71	6.130792997	3.28E-21
chr22-431	chr22	44187999	44189255	+	25.6	1256	"intron (NM_022785, intron 2 of 31)"	MIRb|SINE|MIR	19590	NM_022785	64800	Hs.658996	NM_022785	ENSG00000186976	EFCAB6	DJBP|HSCBCIP1|dJ185D5.1	EF-hand calcium binding domain 6	protein-coding	25.6	5.34	4.794007491	2.00E-08
chr22-4312	chr22	38433033	38434033	+	14.7	1000	"intron (NM_001301130, intron 5 of 5)"	AluJr|SINE|Alu	-19729	NM_001039583	9463	Hs.180871	NM_012407	ENSG00000100151	PICK1	PICK|PRKCABP	protein interacting with PRKCA 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr22-4315	chr22	38475103	38476103	+	15.4	1000	"intron (NM_013356, intron 4 of 4)"	(TTTTG)n|Simple_repeat|Simple_repeat	3567	NM_013356	23539	Hs.745256	NM_013356	ENSG00000100156	SLC16A8	MCT3|REMP	solute carrier family 16 member 8	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr22-4319	chr22	38814552	38815552	+	14.7	1000	Intergenic	Intergenic	-20121	NR_002821	400927	Hs.720223	NR_002821		LOC400927	-	TPTE and PTEN homologous inositol lipid phosphatase pseudogene	pseudo	14.72	2.91	5.058419244	2.67E-05
chr22-433	chr22	44674211	44679937	+	101.8	5726	"intron (NM_001099294, intron 4 of 4)"	"intron (NM_001099294, intron 4 of 4)"	31657	NM_001099294	85352	Hs.6829	NM_001099294	ENSG00000138944	KIAA1644	-	KIAA1644	protein-coding	101.77	17.96	5.666481069	4.51E-33
chr22-4335	chr22	39370584	39371584	+	15.4	1000	"intron (NM_001193289, intron 4 of 4)"	MIR|SINE|MIR	-7320	NM_001270411	9582	Hs.226307	NM_004900	ENSG00000179750	APOBEC3B	A3B|APOBEC1L|ARCD3|ARP4|DJ742C19.2|PHRBNL|bK150C2.2	apolipoprotein B mRNA editing enzyme catalytic subunit 3B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr22-4350	chr22	39732311	39734138	+	30.7	1827	Intergenic	AluJo|SINE|Alu	-12730	NM_004711	9145	Hs.216226	NM_004711	ENSG00000100321	SYNGR1	-	synaptogyrin 1	protein-coding	30.72	5.34	5.752808989	2.29E-11
chr22-4351	chr22	39735832	39738432	+	39.7	2600	Intergenic	Intergenic	-8822	NM_004711	9145	Hs.216226	NM_004711	ENSG00000100321	SYNGR1	-	synaptogyrin 1	protein-coding	39.69	8.74	4.541189931	1.21E-11
chr22-4352	chr22	39742103	39743103	+	14.1	1000	Intergenic	L1ME1|LINE|L1	-3351	NM_004711	9145	Hs.216226	NM_004711	ENSG00000100321	SYNGR1	-	synaptogyrin 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr22-4355	chr22	39868593	39870908	+	32	2315	"intron (NM_002409, intron 1 of 1)"	"intron (NM_002409, intron 1 of 1)"	3077	NR_126469	104502417	Hs.586031	NR_126469	ENSG00000227188	MGAT3-AS1	TapSAKI	MGAT3 antisense RNA 1	ncRNA	32	4.37	7.322654462	5.18E-14
chr22-4356	chr22	39992725	39993725	+	12.8	1000	"intron (NM_021096, intron 1 of 36)"	"intron (NM_021096, intron 1 of 36)"	26467	NM_001003406	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding	12.8	2.43	5.267489712	2.99E-05
chr22-4359	chr22	40091226	40092226	+	14.7	1000	Intergenic	MLT1F2|LTR|ERVL-MaLR	124968	NM_001003406	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr22-436	chr22	45439775	45441070	+	26.9	1295	Intergenic	Intergenic	-34613	NM_001135862	112885	Hs.254097	NM_138415	ENSG00000056487	PHF21B	BHC80L|PHF4	PHD finger protein 21B	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr22-4366	chr22	41427328	41428626	+	19.8	1298	Intergenic	ERVL-E-int|LTR|ERVL	41748	NR_132979	106635682		NR_132979		SNORD140	-	"small nucleolar RNA, C/D box 140"	snoRNA	19.84	1.94	10.22680412	9.57E-11
chr22-4368	chr22	42119279	42120279	+	14.7	1000	"intron (NM_152513, intron 6 of 30)"	L2b|LINE|L2	24261	NM_152513	150365	Hs.116419	NM_152513	ENSG00000167077	MEI1	SPATA38	meiotic double-stranded break formation protein 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr22-4375	chr22	42381517	42382517	+	14.7	1000	"exon (NM_019106, exon 3 of 10)"	"exon (NM_019106, exon 3 of 10)"	9086	NM_145733	55964	Hs.120483	NM_019106	ENSG00000100167	3-Sep	SEP3|bK250D10.3	septin 3	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr22-4382	chr22	43058183	43059183	+	14.7	1000	Intergenic	CpG	-13278	NM_000398	1727	Hs.561064	NM_000398	ENSG00000100243	CYB5R3	B5R|DIA1	cytochrome b5 reductase 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr22-4384	chr22	43126335	43127947	+	23	1612	Intergenic	Intergenic	-9834	NM_001318038	53947	Hs.105956	NM_017436	ENSG00000128274	A4GALT	A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK	"alpha 1,4-galactosyltransferase"	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr22-4387	chr22	43159227	43162719	+	58.2	3492	Intergenic	Intergenic	-43666	NM_001318038	53947	Hs.105956	NM_017436	ENSG00000128274	A4GALT	A14GALT|A4GALT1|Gb3S|P(k)|P1|P1PK|PK	"alpha 1,4-galactosyltransferase"	protein-coding	58.25	13.11	4.44317315	1.10E-15
chr22-440	chr22	46845698	46851037	+	96	5339	"intron (NM_014246, intron 2 of 34)"	"intron (NM_014246, intron 2 of 34)"	84700	NM_014246	9620	Hs.252387	NM_014246	ENSG00000075275	CELSR1	ADGRC1|CDHF9|FMI2|HFMI2|ME2	cadherin EGF LAG seven-pass G-type receptor 1	protein-coding	96.01	15.53	6.182227946	5.12E-34
chr22-4402	chr22	43749439	43753664	+	54.4	4225	Intergenic	L1ME4a|LINE|L1	-12157	NM_173050	80274	Hs.133995	NM_173050	ENSG00000159307	SCUBE1	-	"signal peptide, CUB domain and EGF like domain containing 1"	protein-coding	54.41	11.65	4.670386266	1.91E-15
chr22-4403	chr22	43790742	43794264	+	49.9	3522	Intergenic	MIR|SINE|MIR	-15517	NM_001044370	758	Hs.159538	NM_001044370	ENSG00000186732	MPPED1	239AB|C22orf1|FAM1A	metallophosphoesterase domain containing 1	protein-coding	49.93	3.88	12.8685567	1.59E-29
chr22-4404	chr22	43806650	43820896	+	264.4	14246	"intron (NM_001044370, intron 1 of 6)"	"intron (NM_001044370, intron 1 of 6)"	5753	NM_001044370	758	Hs.159538	NM_001044370	ENSG00000186732	MPPED1	239AB|C22orf1|FAM1A	metallophosphoesterase domain containing 1	protein-coding	264.35	51.94	5.089526377	1.04E-75
chr22-4422	chr22	44079218	44080218	+	15.4	1000	"exon (NM_022785, exon 12 of 32)"	"exon (NM_022785, exon 12 of 32)"	128499	NM_022785	64800	Hs.658996	NM_022785	ENSG00000186976	EFCAB6	DJBP|HSCBCIP1|dJ185D5.1	EF-hand calcium binding domain 6	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr22-4428	chr22	44200424	44201424	+	14.1	1000	"intron (NM_022785, intron 2 of 31)"	L1MA4|LINE|L1	7293	NM_022785	64800	Hs.658996	NM_022785	ENSG00000186976	EFCAB6	DJBP|HSCBCIP1|dJ185D5.1	EF-hand calcium binding domain 6	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr22-4431	chr22	44290042	44299259	+	121	9217	Intergenic	MIR|SINE|MIR	-6757	NM_001177675	150379	Hs.248086	NM_138814	ENSG00000100341	PNPLA5	GS2L|dJ388M5|dJ388M5.4	patatin like phospholipase domain containing 5	protein-coding	120.98	27.18	4.451066961	3.89E-31
chr22-4444	chr22	44498768	44501265	+	35.8	2497	"intron (NM_001003828, intron 4 of 13)"	"intron (NM_001003828, intron 4 of 13)"	35019	NM_001243385	29780	Hs.475074	NM_013327	ENSG00000188677	PARVB	CGI-56	parvin beta	protein-coding	35.84	7.28	4.923076923	1.89E-11
chr22-4447	chr22	44514528	44515528	+	16	1000	"intron (NM_001003828, intron 5 of 13)"	"intron (NM_001003828, intron 5 of 13)"	50031	NM_001243385	29780	Hs.475074	NM_013327	ENSG00000188677	PARVB	CGI-56	parvin beta	protein-coding	16	3.88	4.12371134	7.91E-05
chr22-4454	chr22	44744061	44745061	+	15.4	1000	Intergenic	Intergenic	-35830	NM_001099294	85352	Hs.6829	NM_001099294	ENSG00000138944	KIAA1644	-	KIAA1644	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr22-4455	chr22	44753430	44754430	+	15.4	1000	Intergenic	Intergenic	-45199	NM_001099294	85352	Hs.6829	NM_001099294	ENSG00000138944	KIAA1644	-	KIAA1644	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr22-4463	chr22	44930207	44932549	+	39	2342	Intergenic	L2a|LINE|L2	-33842	NR_028411	388910	Hs.332685	NM_001012986	ENSG00000187012	LINC00207	NCRNA00207	long intergenic non-protein coding RNA 207	ncRNA	39.04	4.85	8.049484536	2.24E-17
chr22-4468	chr22	44970964	44971964	+	14.1	1000	Intergenic	Intergenic	6244	NR_028409	388910	Hs.332685	NM_001012986	ENSG00000187012	LINC00207	NCRNA00207	long intergenic non-protein coding RNA 207	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr22-447	chr22	49119896	49121452	+	36.5	1556	"intron (NM_015381, intron 3 of 3)"	"intron (NM_015381, intron 3 of 3)"	-55433	NR_039761	100616415		NR_039761	ENSG00000266887	MIR4535	-	microRNA 4535	ncRNA	36.48	7.77	4.694980695	8.02E-11
chr22-4476	chr22	45040010	45041711	+	26.2	1701	Intergenic	Tigger2a|DNA|TcMar-Tigger	-19561	NR_044991	414351	Hs.572878	NR_044991		LINC00229	C22orf10|NCRNA00229|dJ474I12.C22.2	long intergenic non-protein coding RNA 229	ncRNA	26.24	2.91	9.017182131	6.53E-13
chr22-4478	chr22	45062911	45063911	+	14.1	1000	Intergenic	Intergenic	-1016	NM_001017528	55615	Hs.102336	NM_015366	ENSG00000186654	PRR5	FLJ20185k|PP610|PROTOR-1|PROTOR1	proline rich 5	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr22-4481	chr22	45202984	45203984	+	15.4	1000	"intron (NM_181334, intron 6 of 14)"	MIRb|SINE|MIR	55046	NM_001017526	23779	Hs.102336	NM_181335	ENSG00000241484	ARHGAP8	BPGAP1|PP610	Rho GTPase activating protein 8	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr22-4493	chr22	45995334	45996334	+	14.1	1000	"intron (NM_006486, intron 16 of 16)"	"intron (NM_006486, intron 16 of 16)"	5693	NR_131244	100506737	Hs.517692	NR_131244	ENSG00000238120	LINC01589	TCONS_00029353	long intergenic non-protein coding RNA 1589	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr22-4498	chr22	46294695	46301453	+	106.9	6758	Intergenic	AluSx|SINE|Alu	74934	NM_058238	7477	Hs.512714	NM_058238	ENSG00000188064	WNT7B	-	Wnt family member 7B	protein-coding	106.89	17.96	5.95155902	3.92E-36
chr22-4503	chr22	46340799	46344705	+	63.4	3906	"intron (NM_058238, intron 2 of 3)"	L3|LINE|CR1	30256	NM_058238	7477	Hs.512714	NM_058238	ENSG00000188064	WNT7B	-	Wnt family member 7B	protein-coding	63.37	8.74	7.250572082	1.53E-25
chr22-4522	chr22	46853175	46854175	+	14.7	1000	"intron (NM_014246, intron 2 of 34)"	"intron (NM_014246, intron 2 of 34)"	79392	NM_014246	9620	Hs.252387	NM_014246	ENSG00000075275	CELSR1	ADGRC1|CDHF9|FMI2|HFMI2|ME2	cadherin EGF LAG seven-pass G-type receptor 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr22-4525	chr22	46872981	46874309	+	20.5	1328	"intron (NM_014246, intron 1 of 34)"	AluSc|SINE|Alu	59422	NM_014246	9620	Hs.252387	NM_014246	ENSG00000075275	CELSR1	ADGRC1|CDHF9|FMI2|HFMI2|ME2	cadherin EGF LAG seven-pass G-type receptor 1	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr22-4528	chr22	46913636	46914636	+	15.4	1000	"intron (NM_014246, intron 1 of 34)"	"intron (NM_014246, intron 1 of 34)"	18931	NM_014246	9620	Hs.252387	NM_014246	ENSG00000075275	CELSR1	ADGRC1|CDHF9|FMI2|HFMI2|ME2	cadherin EGF LAG seven-pass G-type receptor 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr22-4535	chr22	47674890	47685367	+	162.6	10477	Intergenic	Intergenic	-61193	NR_144462	339685	Hs.434351	NR_038922		LOC339685	-	uncharacterized LOC339685	ncRNA	162.58	30.09	5.403123961	3.49E-50
chr22-455	chr22	49825672	49828196	+	58.2	2524	"intron (NR_110522, intron 1 of 2)"	"intron (NR_110522, intron 1 of 2)"	110180	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	58.25	10.19	5.716388616	1.24E-19
chr22-4561	chr22	48345841	48346841	+	15.4	1000	Intergenic	Intergenic	318918	NR_122046	284930	Hs.407567	NR_122046	ENSG00000224271	LOC284930	-	uncharacterized LOC284930	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr22-4564	chr22	48443512	48444512	+	15.4	1000	Intergenic	Intergenic	-226164	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr22-4567	chr22	48478967	48482310	+	48	3343	Intergenic	Intergenic	-189538	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	48.01	11.16	4.301971326	9.69E-13
chr22-4568	chr22	48510950	48514435	+	42.9	3485	Intergenic	Intergenic	-157484	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	42.89	9.71	4.417095778	8.16E-12
chr22-4570	chr22	48547700	48553379	+	81.9	5679	Intergenic	Intergenic	-119637	NR_036172	100422916		NR_036172	ENSG00000266508	MIR3201	-	microRNA 3201	ncRNA	81.93	8.74	9.374141876	2.30E-39
chr22-4578	chr22	48806578	48807578	+	14.1	1000	Intergenic	Intergenic	-78194	NM_001082967	25817	Hs.436854	NM_015381	ENSG00000219438	FAM19A5	QLLK5208|TAFA-5|TAFA5|UNQ5208	"family with sequence similarity 19 member A5, C-C motif chemokine like"	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr22-4586	chr22	48886607	48887607	+	15.4	1000	"intron (NM_001082967, intron 1 of 3)"	"intron (NM_001082967, intron 1 of 3)"	1835	NM_001082967	25817	Hs.436854	NM_015381	ENSG00000219438	FAM19A5	QLLK5208|TAFA-5|TAFA5|UNQ5208	"family with sequence similarity 19 member A5, C-C motif chemokine like"	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr22-459	chr22	50519936	50522225	+	39	2289	"intron (NM_015166, intron 3 of 11)"	"intron (NM_015166, intron 3 of 11)"	2701	NM_139202	23209	Hs.517729	NM_015166	ENSG00000100427	MLC1	LVM|MLC|VL	megalencephalic leukoencephalopathy with subcortical cysts 1	protein-coding	39.04	6.8	5.741176471	1.26E-13
chr22-460	chr22	50551275	50553813	+	50.6	2538	"intron (NM_001164105, intron 6 of 25)"	AluY|SINE|Alu	23859	NM_001164105	54456	Hs.62880	NM_018995	ENSG00000073146	MOV10L1	CHAMP|DJ402G11.8	Mov10 RISC complex RNA helicase like 1	protein-coding	50.57	11.16	4.531362007	4.90E-14
chr22-4601	chr22	49147253	49148253	+	14.7	1000	TTS (NM_001082967)	TTS (NM_001082967)	-28354	NR_039761	100616415		NR_039761	ENSG00000266887	MIR4535	-	microRNA 4535	ncRNA	14.72	0	15.16333034	3.99E-13
chr22-4604	chr22	49285279	49287020	+	26.2	1741	"intron (NR_038944, intron 3 of 6)"	"intron (NR_038944, intron 3 of 6)"	23567	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	26.24	2.91	9.017182131	6.53E-13
chr22-461	chr22	50709472	50710728	+	24.3	1256	Intergenic	CpG-18123	-1278	NM_002751	5600	Hs.57732	NM_002751	ENSG00000185386	MAPK11	P38B|P38BETA2|PRKM11|SAPK2|SAPK2B|p38-2|p38Beta	mitogen-activated protein kinase 11	protein-coding	24.32	0.97	25.07216495	2.01E-20
chr22-4615	chr22	49445070	49449233	+	67.2	4163	Intergenic	AluSx1|SINE|Alu	184569	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	67.21	15.05	4.465780731	5.58E-18
chr22-4618	chr22	49463107	49464107	+	14.1	1000	Intergenic	Intergenic	201025	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr22-4623	chr22	49535421	49537434	+	30.7	2013	Intergenic	Intergenic	273845	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	30.72	1.94	15.83505155	8.26E-21
chr22-4628	chr22	49627608	49632487	+	69.1	4879	Intergenic	Intergenic	307067	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	69.13	16.5	4.18969697	1.29E-17
chr22-463	chr22	18894022	18895546	+	28.2	1524	"intron (NM_005675, intron 2 of 4)"	"intron (NM_005675, intron 2 of 4)"	1048	NM_005675	8214	Hs.474185	NM_005675	ENSG00000183628	DGCR6	-	DiGeorge syndrome critical region gene 6	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr22-4632	chr22	49662271	49670947	+	136.3	8676	Intergenic	Charlie20a|DNA|hAT-Charlie	270505	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	136.34	29.61	4.604525498	3.99E-36
chr22-4637	chr22	49766452	49769499	+	44.2	3047	Intergenic	Intergenic	169139	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	44.17	7.28	6.067307692	6.36E-16
chr22-4647	chr22	49924699	49925699	+	15.4	1000	"intron (NR_110523, intron 1 of 4)"	"intron (NR_110523, intron 1 of 4)"	11915	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	15.36	0	15.82260557	1.26E-14
chr22-4652	chr22	50062080	50066023	+	61.4	3943	Intergenic	LTR12C|LTR|ERV1	-12861	NR_110523	348645	Hs.133159	NM_198851	ENSG00000188511	C22orf34	-	chromosome 22 open reading frame 34	protein-coding	61.45	8.74	7.030892449	1.11E-24
chr22-4661	chr22	50509190	50510456	+	17.9	1266	"intron (NM_015166, intron 8 of 11)"	"intron (NM_015166, intron 8 of 11)"	13958	NM_139202	23209	Hs.517729	NM_015166	ENSG00000100427	MLC1	LVM|MLC|VL	megalencephalic leukoencephalopathy with subcortical cysts 1	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr22-4669	chr22	50610112	50613937	+	65.3	3825	"intron (NM_052839, intron 1 of 2)"	"intron (NM_052839, intron 1 of 2)"	2864	NM_052839	56666	Hs.440092	NM_052839	ENSG00000073150	PANX2	PX2|hPANX2	pannexin 2	protein-coding	65.29	9.71	6.723995881	2.86E-25
chr22-4674	chr22	50986483	50987483	+	14.7	1000	"exon (NM_138433, exon 1 of 1)"	"exon (NM_138433, exon 1 of 1)"	521	NM_138433	113730	Hs.137007	NM_138433	ENSG00000130487	KLHDC7B	-	kelch domain containing 7B	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr22-4677	chr22	51039716	51040716	+	14.7	1000	"intron (NM_012324, intron 1 of 12)"	"intron (NM_012324, intron 1 of 12)"	1102	NM_012324	23542	Hs.558180	NM_012324	ENSG00000008735	MAPK8IP2	IB-2|IB2|JIP2|PRKM8IPL	mitogen-activated protein kinase 8 interacting protein 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr22-4678	chr22	51049619	51050619	+	14.1	1000	TTS (NM_012324)	TTS (NM_012324)	11005	NM_012324	23542	Hs.558180	NM_012324	ENSG00000008735	MAPK8IP2	IB-2|IB2|JIP2|PRKM8IPL	mitogen-activated protein kinase 8 interacting protein 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr22-476	chr22	23402740	23404321	+	28.2	1581	"intron (NM_014433, intron 6 of 6)"	"intron (NM_014433, intron 6 of 6)"	-9139	NM_002073	2781	Hs.584760	NM_002073	ENSG00000128266	GNAZ	-	G protein subunit alpha z	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr22-479	chr22	23667235	23668235	+	22.4	1000	Intergenic	Intergenic	56578	NR_037839	649264	Hs.600549	NR_037839		CES5AP1	-	carboxylesterase 5A pseudogene 1	pseudo	22.4	1.46	15.34246575	8.59E-15
chr22-481	chr22	25262815	25264339	+	28.2	1524	"intron (NM_133454, intron 10 of 24)"	MIRb|SINE|MIR	61389	NM_133454	129049	Hs.474397	NM_133454	ENSG00000167037	SGSM1	RUTBC2	small G protein signaling modulator 1	protein-coding	28.16	5.82	4.838487973	3.50E-09
chr22-503	chr22	37189835	37193578	+	65.3	3743	Intergenic	Intergenic	-19529	NR_033531	11020	Hs.415172	NM_006860	ENSG00000100360	IFT27	BBS19|RABL4|RAYL	intraflagellar transport 27	protein-coding	65.29	13.11	4.980167811	9.49E-20
chr22-504	chr22	37232406	37233406	+	22.4	1000	Intergenic	Intergenic	-17389	NM_002854	5816	Hs.295449	NM_002854	ENSG00000100362	PVALB	D22S749	parvalbumin	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr22-508	chr22	37769458	37773338	+	67.2	3880	"exon (NM_052906, exon 3 of 3)"	"exon (NM_052906, exon 3 of 3)"	-20519	NR_110515	100506271	Hs.220558	NR_110515	ENSG00000237862	LOC100506271	-	uncharacterized LOC100506271	ncRNA	67.21	11.16	6.022401434	1.96E-23
chr22-509	chr22	37796650	37798786	+	40.3	2136	"intron (NM_052906, intron 2 of 2)"	"intron (NM_052906, intron 2 of 2)"	25787	NM_052906	114794	Hs.344170	NM_052906	ENSG00000166897	ELFN2	LRRC62|PPP1R29	extracellular leucine rich repeat and fibronectin type III domain containing 2	protein-coding	40.33	5.82	6.929553265	3.74E-16
chr22-514	chr22	39617548	39621254	+	63.4	3706	TTS (NM_033016)	TTS (NM_033016)	17513	NM_033016	5155	Hs.1976	NM_002608	ENSG00000100311	PDGFB	IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis	platelet derived growth factor subunit B	protein-coding	63.37	14.56	4.352335165	1.34E-16
chr22-528	chr22	44424164	44427230	+	58.2	3066	"intron (NM_001243386, intron 1 of 11)"	AluSx|SINE|Alu	3513	NM_001243386	29780	Hs.475074	NM_013327	ENSG00000188677	PARVB	CGI-56	parvin beta	protein-coding	58.25	5.82	10.00859107	3.99E-29
chr22-547	chr22	49297465	49301255	+	57	3790	Intergenic	MLT2B2|LTR|ERVL	36778	NR_038944	100128946	Hs.535676	NR_038944	ENSG00000205632	LINC01310	WI2-81516E3.1	long intergenic non-protein coding RNA 1310	ncRNA	56.97	11.16	5.10483871	1.84E-17
chr22-552	chr22	49678943	49687210	+	137.6	8267	Intergenic	MER4C|LTR|ERV1	254038	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	137.62	29.12	4.725961538	2.14E-37
chr22-553	chr22	49706948	49707948	+	21.1	1000	Intergenic	L1M5|LINE|L1	229666	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	21.12	4.85	4.354639175	2.52E-06
chr22-563	chr22	16867730	16868730	+	21.8	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	205470	NM_014406	150160	Hs.128342	NM_014406	ENSG00000198445	CCT8L2	CESK1	chaperonin containing TCP1 subunit 8 like 2	protein-coding	21.76	2.43	8.95473251	2.49E-11
chr22-567	chr22	19692348	19695339	+	43.5	2991	Intergenic	AluSx|SINE|Alu	-8144	NM_002688	5413	Hs.728762	NM_002688	ENSG00000184702	5-Sep	CDCREL|CDCREL-1|CDCREL1|H5|HCDCREL-1|PNUTL1	septin 5	protein-coding	43.53	8.74	4.980549199	1.04E-13
chr22-568	chr22	19736389	19756946	+	408.4	20557	"intron (NM_005992, intron 1 of 9)"	"intron (NM_005992, intron 1 of 9)"	2441	NM_080647	6899	Hs.173984	NM_005992	ENSG00000184058	TBX1	CAFS|CATCH22|CTHM|DGCR|DGS|DORV|TBX1C|TGA|VCF|VCFS	T-box 1	protein-coding	408.37	51.94	7.862341163	4.32E-167
chr22-583	chr22	23434281	23437787	+	53.8	3506	"intron (NM_002073, intron 1 of 2)"	"intron (NM_002073, intron 1 of 2)"	23365	NM_002073	2781	Hs.584760	NM_002073	ENSG00000128266	GNAZ	-	G protein subunit alpha z	protein-coding	53.77	12.62	4.260697306	2.65E-14
chr22-584	chr22	23697964	23699563	+	33.9	1599	Intergenic	Intergenic	25550	NR_037839	649264	Hs.600549	NR_037839		CES5AP1	-	carboxylesterase 5A pseudogene 1	pseudo	33.92	7.77	4.365508366	1.68E-09
chr22-591	chr22	26369559	26370559	+	19.8	1000	"intron (NM_001318245, intron 39 of 43)"	"intron (NM_001318245, intron 39 of 43)"	-195381	NM_001184773	23544	Hs.194766	NM_021115	ENSG00000100095	SEZ6L	-	seizure related 6 homolog like	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr22-596	chr22	29027112	29028112	+	21.1	1000	"intron (NM_001145418, intron 1 of 22)"	AluJo|SINE|Alu	48241	NM_001145418	23331	Hs.387856	NM_015281	ENSG00000100154	TTC28	TPRBK	tetratricopeptide repeat domain 28	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr22-599	chr22	29349313	29350827	+	28.8	1514	"intron (NM_032173, intron 1 of 8)"	"intron (NM_032173, intron 1 of 8)"	36693	NM_032173	84133	Hs.604200	NM_032173	ENSG00000183579	ZNRF3	BK747E2.3|RNF203	zinc and ring finger 3	protein-coding	28.8	6.31	4.564183835	1.42E-08
chr22-607	chr22	29585941	29587799	+	33.9	1858	Intergenic	AluSq2|SINE|Alu	-15031	NM_133455	129080	Hs.289106	NM_133455	ENSG00000186998	EMID1	EMI5|EMU1	EMI domain containing 1	protein-coding	33.92	5.82	5.828178694	4.04E-12
chr22-614	chr22	33203769	33208466	+	83.2	4697	"intron (NM_000362, intron 1 of 4)"	"intron (NM_000362, intron 1 of 4)"	9315	NM_000362	7078	Hs.644633	NM_000362	ENSG00000100234	TIMP3	HSMRK222|K222|K222TA2|SFD	TIMP metallopeptidase inhibitor 3	protein-coding	83.21	16.5	5.043030303	5.60E-25
chr22-622	chr22	36963686	36966621	+	52.5	2935	"intron (NM_006078, intron 2 of 3)"	"intron (NM_006078, intron 2 of 3)"	-39876	NM_003753	8664	Hs.55682	NM_003753	ENSG00000100353	EIF3D	EIF3S7|eIF3-p66|eIF3-zeta	eukaryotic translation initiation factor 3 subunit D	protein-coding	52.49	3.88	13.52835052	8.89E-32
chr22-623	chr22	36969704	36970961	+	23.7	1257	"intron (NM_006078, intron 2 of 3)"	L2|LINE|L2	-45055	NM_003753	8664	Hs.55682	NM_003753	ENSG00000100353	EIF3D	EIF3S7|eIF3-p66|eIF3-zeta	eukaryotic translation initiation factor 3 subunit D	protein-coding	23.68	2.43	9.744855967	2.61E-12
chr22-640	chr22	39625326	39631556	+	101.1	6230	"intron (NM_002608, intron 3 of 6)"	"intron (NM_002608, intron 3 of 6)"	8473	NM_033016	5155	Hs.1976	NM_002608	ENSG00000100311	PDGFB	IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis	platelet derived growth factor subunit B	protein-coding	101.13	21.36	4.734550562	2.91E-28
chr22-646	chr22	41957163	41958424	+	25	1261	promoter-TSS (NR_134631)	promoter-TSS (NR_134631)	779	NM_014460	27254	Hs.310893	NM_014460	ENSG00000172346	CSDC2	PIPPIN|dJ347H13.2	cold shock domain containing C2	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr22-649	chr22	42827935	42828935	+	20.5	1000	promoter-TSS (NM_001318323)	promoter-TSS (NM_001318323)	-34	NM_145912	150372	Hs.436677	NM_145912	ENSG00000235568	NFAM1	CNAIP	NFAT activating protein with ITAM motif 1	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr22-655	chr22	43823252	43824252	+	19.2	1000	"intron (NM_001044370, intron 2 of 6)"	"intron (NM_001044370, intron 2 of 6)"	15732	NM_001044370	758	Hs.159538	NM_001044370	ENSG00000186732	MPPED1	239AB|C22orf1|FAM1A	metallophosphoesterase domain containing 1	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr22-657	chr22	44053488	44055936	+	46.7	2448	"intron (NM_198856, intron 15 of 29)"	L1MEg1|LINE|L1	142578	NR_046563	100874197	Hs.627997	NR_046563		EFCAB6-AS1	-	EFCAB6 antisense RNA 1	ncRNA	46.73	9.22	5.068329718	1.85E-14
chr22-658	chr22	44114486	44115736	+	23.7	1250	"intron (NM_198856, intron 6 of 29)"	"intron (NM_198856, intron 6 of 29)"	93106	NM_022785	64800	Hs.658996	NM_022785	ENSG00000186976	EFCAB6	DJBP|HSCBCIP1|dJ185D5.1	EF-hand calcium binding domain 6	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr22-663	chr22	44651062	44652892	+	34.6	1830	"intron (NM_001099294, intron 4 of 4)"	MLT2B4|LTR|ERVL	56754	NM_001099294	85352	Hs.6829	NM_001099294	ENSG00000138944	KIAA1644	-	KIAA1644	protein-coding	34.56	6.8	5.082352941	2.10E-11
chr22-664	chr22	45833653	45835378	+	30.7	1725	Intergenic	L1MC2|LINE|L1	24943	NM_015653	26150	Hs.475110	NM_015653	ENSG00000128408	RIBC2	C22orf11|TRIB	RIB43A domain with coiled-coils 2	protein-coding	30.72	6.31	4.868462758	6.13E-10
chr22-669	chr22	46411313	46413546	+	44.8	2233	Intergenic	AluSx1|SINE|Alu	9933	NR_027240	730668	Hs.640071	NR_027240	ENSG00000280424	LOC730668	-	dynein heavy chain -like pseudogene	pseudo	44.81	4.85	9.239175258	4.43E-22
chr22-672	chr22	46422884	46424139	+	25	1255	Intergenic	CpG	17237	NR_027036	100271722	Hs.528519	NR_027036		LINC00899	-	long intergenic non-protein coding RNA 899	ncRNA	24.96	2.43	10.27160494	2.59E-13
chr22-677	chr22	46465624	46466901	+	24.3	1277	Intergenic	CpG	-15615	NR_027033	400931	Hs.235838	NM_207477	ENSG00000197182	MIRLET7BHG	linc-Ppara	MIRLET7B host gene	ncRNA	24.32	4.85	5.01443299	2.27E-08
chr22-681	chr22	46886305	46887305	+	21.1	1000	"intron (NM_014246, intron 1 of 34)"	MIRc|SINE|MIR	46262	NM_014246	9620	Hs.252387	NM_014246	ENSG00000075275	CELSR1	ADGRC1|CDHF9|FMI2|HFMI2|ME2	cadherin EGF LAG seven-pass G-type receptor 1	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr22-683	chr22	48827653	48829701	+	38.4	2048	Intergenic	Intergenic	-56595	NM_001082967	25817	Hs.436854	NM_015381	ENSG00000219438	FAM19A5	QLLK5208|TAFA-5|TAFA5|UNQ5208	"family with sequence similarity 19 member A5, C-C motif chemokine like"	protein-coding	38.4	5.82	6.597938144	2.56E-15
chr22-685	chr22	48949405	48950405	+	21.8	1000	"intron (NM_001082967, intron 1 of 3)"	"intron (NM_001082967, intron 1 of 3)"	-6706	NR_038917	284933	Hs.159057	NR_038917	ENSG00000281732	LOC284933	-	uncharacterized LOC284933	ncRNA	21.76	5.34	4.074906367	1.97E-06
chr22-690	chr22	49774791	49776063	+	23.7	1272	Intergenic	Intergenic	161687	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	23.68	4.85	4.882474227	1.15E-07
chr22-692	chr22	49962002	49963436	+	25.6	1434	"intron (NR_110523, intron 1 of 4)"	"intron (NR_110523, intron 1 of 4)"	-25605	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	25.6	3.88	6.597938144	1.00E-10
chr22-704	chr22	19673954	19679874	+	86.4	5920	Intergenic	Intergenic	-25073	NM_002688	5413	Hs.728762	NM_002688	ENSG00000184702	5-Sep	CDCREL|CDCREL-1|CDCREL1|H5|HCDCREL-1|PNUTL1	septin 5	protein-coding	86.41	15.05	5.741528239	1.31E-28
chr22-707	chr22	20204555	20206488	+	34.6	1933	Intergenic	Intergenic	11666	NR_026919	150197	Hs.635544	NM_152508	ENSG00000236499	LINC00896	-	long intergenic non-protein coding RNA 896	ncRNA	34.56	2.91	11.87628866	4.47E-20
chr22-708	chr22	20251657	20255528	+	56.3	3871	"intron (NM_023004, intron 1 of 1)"	"intron (NM_023004, intron 1 of 1)"	2224	NM_023004	65078	Hs.30868	NM_023004	ENSG00000040608	RTN4R	NGR|NOGOR	reticulon 4 receptor	protein-coding	56.33	6.8	8.283823529	1.67E-25
chr22-710	chr22	20263368	20264994	+	26.9	1626	Intergenic	Intergenic	-8365	NM_023004	65078	Hs.30868	NM_023004	ENSG00000040608	RTN4R	NGR|NOGOR	reticulon 4 receptor	protein-coding	26.88	3.4	7.905882353	1.25E-12
chr22-716	chr22	22500488	22501488	+	21.1	1000	Intergenic	MIR|SINE|MIR	-98204	NM_001303509	7441	Hs.247979	NM_007128	ENSG00000169575	VPREB1	CD179a|IGI|IGVPB|VPREB	pre-B lymphocyte 1	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr22-734	chr22	26777024	26778547	+	26.9	1523	"3' UTR (NM_001184776, exon 15 of 15)"	"3' UTR (NM_001184776, exon 15 of 15)"	-47495	NM_020437	57168	Hs.567547	NM_020437	ENSG00000128203	ASPHD2	-	aspartate beta-hydroxylase domain containing 2	protein-coding	26.88	4.85	5.542268041	7.61E-10
chr22-735	chr22	26798496	26800971	+	44.2	2475	Intergenic	AluSx1|SINE|Alu	-25547	NM_020437	57168	Hs.567547	NM_020437	ENSG00000128203	ASPHD2	-	aspartate beta-hydroxylase domain containing 2	protein-coding	44.17	6.31	7	1.02E-17
chr22-736	chr22	27285837	27289726	+	58.2	3889	Intergenic	Intergenic	-11474	NR_110540	101929539	Hs.517505	NR_110540	ENSG00000235271	LINC01422	-	long intergenic non-protein coding RNA 1422	ncRNA	58.25	12.13	4.802143446	7.23E-17
chr22-74	chr22	23711157	23712157	+	28.8	1000	"intron (NR_037839, intron 4 of 6)"	"intron (NR_037839, intron 4 of 6)"	12656	NR_037839	649264	Hs.600549	NR_037839		CES5AP1	-	carboxylesterase 5A pseudogene 1	pseudo	28.8	5.82	4.948453608	3.50E-09
chr22-740	chr22	29331640	29332640	+	20.5	1000	"intron (NM_032173, intron 1 of 8)"	"intron (NM_032173, intron 1 of 8)"	18763	NM_032173	84133	Hs.604200	NM_032173	ENSG00000183579	ZNRF3	BK747E2.3|RNF203	zinc and ring finger 3	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr22-744	chr22	29384179	29386205	+	38.4	2026	"intron (NM_032173, intron 2 of 8)"	"intron (NM_032173, intron 2 of 8)"	42272	NR_046851	100874123	Hs.674708	NR_046851	ENSG00000177993	ZNRF3-AS1	-	ZNRF3 antisense RNA 1	ncRNA	38.4	7.28	5.274725275	6.93E-13
chr22-750	chr22	32462436	32463695	+	25	1259	"intron (NM_001256314, intron 2 of 13)"	"intron (NM_001256314, intron 2 of 13)"	7908	NM_001256314	6523	Hs.1964	NM_000343	ENSG00000100170	SLC5A1	D22S675|NAGT|SGLT1	solute carrier family 5 member 1	protein-coding	24.96	4.37	5.711670481	4.38E-09
chr22-752	chr22	33751903	33752903	+	20.5	1000	"intron (NM_004737, intron 10 of 15)"	MIR3|SINE|MIR	80252	NR_039921	100616295		NR_039921	ENSG00000266012	MIR4764	-	microRNA 4764	ncRNA	20.48	4.85	4.222680412	2.52E-06
chr22-760	chr22	37209394	37216590	+	136.3	7196	promoter-TSS (NM_001315532)	promoter-TSS (NM_001315532)	87	NM_001315532	5816	Hs.295449	NM_002854	ENSG00000100362	PVALB	D22S749	parvalbumin	protein-coding	136.34	21.84	6.242673993	1.59E-47
chr22-763	chr22	37378698	37380086	+	29.4	1388	Intergenic	AluSx1|SINE|Alu	18103	NR_038954	100506241	Hs.640023	NR_038954	ENSG00000215403	LL22NC01-81G9.3	-	uncharacterized protein FLJ39582-like	ncRNA	29.44	2.91	10.11683849	7.13E-16
chr22-777	chr22	38862926	38867590	+	90.3	4664	"intron (NM_006855, intron 1 of 4)"	"intron (NM_006855, intron 1 of 4)"	1191	NM_006855	11015	Hs.745072	NM_006855	ENSG00000100196	KDELR3	ERD2L3	KDEL endoplasmic reticulum protein retention receptor 3	protein-coding	90.25	13.11	6.884057971	1.80E-34
chr22-790	chr22	42311228	42313224	+	37.1	1996	Intergenic	Intergenic	-1555	NM_001207020	440829	Hs.526704	NM_001207020	ENSG00000234965	SHISA8	C22orf17|Orf26	shisa family member 8	protein-coding	37.12	6.8	5.458823529	7.17E-13
chr22-80	chr22	39853637	39855194	+	37.1	1557	"intron (NM_002409, intron 1 of 1)"	"intron (NM_002409, intron 1 of 1)"	1090	NM_002409	4248	Hs.276808	NM_002409	ENSG00000128268	MGAT3	GNT-III|GNT3	"mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase"	protein-coding	37.12	1.94	19.13402062	4.60E-27
chr22-810	chr22	45236709	45237709	+	21.1	1000	"intron (NM_181334, intron 10 of 14)"	"intron (NM_181334, intron 10 of 14)"	88771	NM_001017526	23779	Hs.102336	NM_181335	ENSG00000241484	ARHGAP8	BPGAP1|PP610	Rho GTPase activating protein 8	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr22-825	chr22	48945418	48947237	+	33.3	1819	"intron (NM_001082967, intron 1 of 3)"	"intron (NM_001082967, intron 1 of 3)"	-3128	NR_038917	284933	Hs.159057	NR_038917	ENSG00000281732	LOC284933	-	uncharacterized LOC284933	ncRNA	33.28	4.85	6.86185567	7.28E-14
chr22-834	chr22	49756474	49761100	+	68.5	4626	Intergenic	MLT1D|LTR|ERVL-MaLR	178327	NR_037440	100500882		NR_037440	ENSG00000264139	MIR3667	-	microRNA 3667	ncRNA	68.49	15.05	4.550830565	1.23E-18
chr22-836	chr22	50053700	50054954	+	24.3	1254	Intergenic	Intergenic	-3137	NR_110523	348645	Hs.133159	NM_198851	ENSG00000188511	C22orf34	-	chromosome 22 open reading frame 34	protein-coding	24.32	2.91	8.357388316	5.77E-12
chr22-837	chr22	50119508	50121986	+	48	2478	Intergenic	MER76|LTR|ERVL	-69557	NR_110523	348645	Hs.133159	NM_198851	ENSG00000188511	C22orf34	-	chromosome 22 open reading frame 34	protein-coding	48.01	8.74	5.493135011	6.98E-16
chr22-838	chr22	50430143	50431606	+	26.2	1463	Intergenic	AluJb|SINE|Alu	20181	NM_001001694	400935	Hs.526712	NM_001001694	ENSG00000188263	IL17REL	-	interleukin 17 receptor E like	protein-coding	26.24	6.31	4.158478605	2.77E-07
chr22-839	chr22	50482764	50484386	+	26.2	1622	Intergenic	CpG	-32520	NM_001001694	400935	Hs.526712	NM_001001694	ENSG00000188263	IL17REL	-	interleukin 17 receptor E like	protein-coding	26.24	2.91	9.017182131	6.53E-13
chr22-862	chr22	23244199	23245729	+	26.2	1530	Intergenic	Intergenic	15004	NM_001178126	100423062	Hs.449585	NM_001178126	ENSG00000254709	IGLL5	IGL|IGLV|VL-MAR	immunoglobulin lambda like polypeptide 5	protein-coding	26.24	2.91	9.017182131	6.53E-13
chr22-867	chr22	24198735	24199735	+	20.5	1000	promoter-TSS (NM_001282864)	promoter-TSS (NM_001282864)	48	NM_001282864	66035	Hs.661910	NM_030807	ENSG00000133460	SLC2A11	GLUT10|GLUT11	solute carrier family 2 member 11	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr22-868	chr22	24390131	24391384	+	23	1253	"intron (NR_003082, intron 4 of 4)"	"intron (NR_003082, intron 4 of 4)"	-6446	NM_001293809	2952	Hs.268573	NM_000853		GSTT1	-	glutathione S-transferase theta 1	protein-coding	23.04	0.97	23.75257732	5.03E-19
chr22-871	chr22	25506243	25508997	+	59.5	2754	"intron (NR_038941, intron 2 of 4)"	"intron (NR_038941, intron 2 of 4)"	1039	NR_038941	100128531	Hs.662126	NR_038941	ENSG00000203280	LOC100128531	-	uncharacterized LOC100128531	ncRNA	59.53	8.74	6.811212815	5.39E-23
chr22-873	chr22	25636365	25637838	+	28.2	1473	Intergenic	Intergenic	21489	NM_000496	1415	Hs.373074	NM_000496	ENSG00000244752	CRYBB2	CCA2|CRYB2|CRYB2A|CTRCT3|D22S665	crystallin beta B2	protein-coding	28.16	3.4	8.282352941	1.50E-13
chr22-879	chr22	27051556	27053800	+	48	2244	promoter-TSS (NR_003491)	promoter-TSS (NR_003491)	-768	NR_033319	440823	Hs.517502	NR_003491	ENSG00000225783	MIAT	C22orf35|GOMAFU|LINC00066|NCRNA00066|RNCR2|lncRNA-MIAT	myocardial infarction associated transcript (non-protein coding)	ncRNA	48.01	9.22	5.207158351	3.58E-15
chr22-882	chr22	27299610	27300871	+	23.7	1261	"intron (NR_110540, intron 1 of 2)"	L2c|LINE|L2	985	NR_110540	101929539	Hs.517505	NR_110540	ENSG00000235271	LINC01422	-	long intergenic non-protein coding RNA 1422	ncRNA	23.68	3.88	6.103092784	4.22E-09
chr22-887	chr22	29054663	29055663	+	19.8	1000	"intron (NM_001145418, intron 1 of 22)"	"intron (NM_001145418, intron 1 of 22)"	20690	NM_001145418	23331	Hs.387856	NM_015281	ENSG00000100154	TTC28	TPRBK	tetratricopeptide repeat domain 28	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr22-893	chr22	29406613	29409438	+	39.7	2825	"intron (NM_032173, intron 2 of 8)"	"intron (NM_032173, intron 2 of 8)"	19439	NR_046851	100874123	Hs.674708	NR_046851	ENSG00000177993	ZNRF3-AS1	-	ZNRF3 antisense RNA 1	ncRNA	39.69	8.74	4.541189931	1.21E-11
chr22-894	chr22	29420806	29422982	+	39.7	2176	"non-coding (NR_046851, exon 3 of 3)"	"non-coding (NR_046851, exon 3 of 3)"	5570	NR_046851	100874123	Hs.674708	NR_046851	ENSG00000177993	ZNRF3-AS1	-	ZNRF3 antisense RNA 1	ncRNA	39.69	5.34	7.43258427	3.64E-17
chr22-899	chr22	29606531	29609643	+	48	3112	"intron (NM_133455, intron 1 of 14)"	AluSz6|SINE|Alu	6186	NM_001267895	129080	Hs.289106	NM_133455	ENSG00000186998	EMID1	EMI5|EMU1	EMI domain containing 1	protein-coding	48.01	11.65	4.121030043	3.24E-12
chr22-903	chr22	31218448	31219448	+	19.8	1000	"intron (NM_001282741, intron 1 of 12)"	"intron (NM_001282741, intron 1 of 12)"	445	NM_001282741	23762	Hs.517546	NM_030758	ENSG00000184792	OSBP2	HLM|ORP-4|ORP4|OSBPL1|OSBPL4	oxysterol binding protein 2	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr22-915	chr22	36466826	36468123	+	21.8	1297	Intergenic	AluJr|SINE|Alu	-42889	NM_001082578	23543	Hs.282998	NM_014309	ENSG00000100320	RBFOX2	FOX2|Fox-2|HNRBP2|HRNBP2|RBM9|RTA|dJ106I20.3|fxh	"RNA binding protein, fox-1 homolog 2"	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr22-916	chr22	36584591	36586147	+	31.4	1556	"3' UTR (NM_030643, exon 7 of 7)"	"3' UTR (NM_030643, exon 7 of 7)"	15510	NM_145660	80832	Hs.115099	NM_030643	ENSG00000100336	APOL4	APOL-IV|APOLIV	apolipoprotein L4	protein-coding	31.36	5.82	5.388316151	1.29E-10
chr22-921	chr22	37113990	37115268	+	21.8	1278	"intron (NR_134623, intron 1 of 3)"	"intron (NR_134623, intron 1 of 3)"	14708	NR_134623	105373021	Hs.401697	NR_134623		LOC105373021	-	uncharacterized LOC105373021	ncRNA	21.76	4.85	4.486597938	5.54E-07
chr22-923	chr22	37446239	37447239	+	19.8	1000	Intergenic	Intergenic	-1037	NM_024681	79734	Hs.517597	NM_024681	ENSG00000100379	KCTD17	-	potassium channel tetramerization domain containing 17	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr22-932	chr22	37979329	37980329	+	17.9	1000	Intergenic	AluJr|SINE|Alu	-3805	NM_006498	3957	Hs.531776	NM_006498	ENSG00000100079	LGALS2	HL14	galectin 2	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr22-934	chr22	38598485	38599767	+	23.7	1282	promoter-TSS (NM_001161573)	promoter-TSS (NM_001161573)	99	NM_001161573	23764	Hs.517617	NM_012323	ENSG00000185022	MAFF	U-MAF|hMafF	MAF bZIP transcription factor F	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr22-935	chr22	38670098	38671352	+	22.4	1254	Intergenic	L2a|LINE|L2	-1685	NM_001195072	25829	Hs.182626	NM_012264	ENSG00000198792	TMEM184B	C22orf5|FM08|HS5O6A|HSPC256	transmembrane protein 184B	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr22-940	chr22	39638100	39642680	+	84.5	4580	"5' UTR (NM_002608, exon 1 of 7)"	"5' UTR (NM_002608, exon 1 of 7)"	670	NM_002608	5155	Hs.1976	NM_002608	ENSG00000100311	PDGFB	IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis	platelet derived growth factor subunit B	protein-coding	84.49	6.8	12.425	6.94E-48
chr22-943	chr22	39949525	39950804	+	23.7	1279	Intergenic	Intergenic	-16594	NM_021096	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding	23.68	5.34	4.434456929	4.49E-07
chr22-947	chr22	40121777	40123593	+	36.5	1816	Intergenic	L2a|LINE|L2	155927	NM_001003406	8911	Hs.125116	NM_021096	ENSG00000100346	CACNA1I	Cav3.3|ca(v)3.3	calcium voltage-gated channel subunit alpha1 I	protein-coding	36.48	7.28	5.010989011	1.89E-11
chr22-985	chr22	44723753	44726529	+	42.2	2776	Intergenic	Intergenic	-16410	NM_001099294	85352	Hs.6829	NM_001099294	ENSG00000138944	KIAA1644	-	KIAA1644	protein-coding	42.25	7.77	5.437580438	2.23E-14
chr22-992	chr22	45473981	45474981	+	18.6	1000	Intergenic	L1ME3|LINE|L1	-68672	NM_001135862	112885	Hs.254097	NM_138415	ENSG00000056487	PHF21B	BHC80L|PHF4	PHD finger protein 21B	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr22-994	chr22	45850869	45851869	+	20.5	1000	Intergenic	Intergenic	41797	NM_015653	26150	Hs.475110	NM_015653	ENSG00000128408	RIBC2	C22orf11|TRIB	RIB43A domain with coiled-coils 2	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr22-995	chr22	46272816	46274764	+	40.3	1948	Intergenic	Intergenic	99218	NM_058238	7477	Hs.512714	NM_058238	ENSG00000188064	WNT7B	-	Wnt family member 7B	protein-coding	40.33	9.22	4.374186551	4.47E-11
chr3-1001	chr3	141517538	141518538	+	17.3	1000	"intron (NM_139209, intron 2 of 3)"	"intron (NM_139209, intron 2 of 3)"	20995	NM_139209	131890	Hs.680654	NM_139209	ENSG00000114124	GRK7	GPRK7	G protein-coupled receptor kinase 7	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr3-1005	chr3	150506095	150507095	+	17.3	1000	Intergenic	Intergenic	-25332	NM_005067	6478	Hs.477959	NM_005067	ENSG00000181788	SIAH2	hSiah2	siah E3 ubiquitin protein ligase 2	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr3-1006	chr3	156096402	156097656	+	20.5	1254	"intron (NM_172159, intron 1 of 13)"	L2a|LINE|L2	67696	NR_046618	100874084	Hs.131282	NR_046618	ENSG00000242370	KCNAB1-AS1	-	KCNAB1 antisense RNA 1	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr3-1007	chr3	159942369	159943970	+	26.9	1601	promoter-TSS (NM_001168214)	promoter-TSS (NM_001168214)	-254	NM_001168214	401097	Hs.729755	NM_001168214	ENSG00000180044	C3orf80	-	chromosome 3 open reading frame 80	protein-coding	26.88	4.37	6.151029748	1.19E-10
chr3-1008	chr3	160183305	160184305	+	16	1000	Intergenic	AluSc|SINE|Alu	-16179	NM_173084	286827	Hs.212957	NM_173084	ENSG00000213186	TRIM59	IFT80L|MRF1|RNF104|TRIM57|TSBF1	tripartite motif containing 59	protein-coding	16	3.4	4.705882353	2.25E-05
chr3-1015	chr3	168960055	168961055	+	16.6	1000	"intron (NM_001205194, intron 1 of 15)"	"intron (NM_001205194, intron 1 of 15)"	-95033	NM_001164000	2122	Hs.744090	NM_004991	ENSG00000085276	MECOM	AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2	MDS1 and EVI1 complex locus	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr3-1018	chr3	172622934	172624305	+	22.4	1371	"intron (NM_031955, intron 10 of 10)"	"intron (NM_031955, intron 10 of 10)"	155144	NM_001258315	1894	Hs.518299	NM_018098	ENSG00000114346	ECT2	ARHGEF31	epithelial cell transforming 2	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr3-1023	chr3	182896673	182897943	+	19.8	1270	"intron (NM_015078, intron 29 of 29)"	CpG	-16641	NM_014398	27074	Hs.518448	NM_014398	ENSG00000078081	LAMP3	CD208|DC LAMP|DC-LAMP|DCLAMP|LAMP|LAMP-3|TSC403	lysosomal associated membrane protein 3	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr3-1032	chr3	184454942	184456660	+	28.8	1718	Intergenic	Intergenic	-25965	NM_022149	64110	Hs.306123	NM_022149	ENSG00000177383	MAGEF1	-	MAGE family member F1	protein-coding	28.8	4.85	5.93814433	1.30E-10
chr3-1034	chr3	185118162	185119162	+	16.6	1000	"intron (NM_004721, intron 1 of 13)"	"intron (NM_004721, intron 1 of 13)"	37826	NM_004721	9175	Hs.591306	NM_004721	ENSG00000073803	MAP3K13	LZK|MEKK13|MLK	mitogen-activated protein kinase kinase kinase 13	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr3-1035	chr3	185123446	185124446	+	16.6	1000	"intron (NM_004721, intron 1 of 13)"	"intron (NM_004721, intron 1 of 13)"	43110	NM_004721	9175	Hs.591306	NM_004721	ENSG00000073803	MAP3K13	LZK|MEKK13|MLK	mitogen-activated protein kinase kinase kinase 13	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr3-1036	chr3	185242119	185243389	+	20.5	1270	"intron (NM_139248, intron 4 of 9)"	AluJb|SINE|Alu	-25909	NM_080652	90407	Hs.677570	NM_080652	ENSG00000163900	TMEM41A	2900010K02Rik	transmembrane protein 41A	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr3-1039	chr3	186078716	186080622	+	44.8	1906	"intron (NM_001080744, intron 1 of 23)"	CpG	354	NM_001080745	1608	Hs.683449	NM_001346	ENSG00000058866	DGKG	DAGK3|DGK-GAMMA	diacylglycerol kinase gamma	protein-coding	44.81	5.82	7.699312715	1.25E-19
chr3-1040	chr3	186335181	186337024	+	32	1843	"intron (NM_001622, intron 4 of 6)"	"intron (NM_001622, intron 4 of 6)"	5252	NM_001622	197	Hs.324746	NM_001622	ENSG00000145192	AHSG	A2HS|AHS|FETUA|HSGA	alpha 2-HS glycoprotein	protein-coding	32	5.82	5.498281787	2.32E-11
chr3-1042	chr3	187461296	187462558	+	19.2	1262	"intron (NM_001706, intron 1 of 9)"	"intron (NM_001706, intron 1 of 9)"	1586	NM_001706	604	Hs.478588	NM_001706	ENSG00000113916	BCL6	BCL5|BCL6A|LAZ3|ZBTB27|ZNF51	B-cell CLL/lymphoma 6	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr3-1044	chr3	193522043	193526148	+	64.6	4105	Intergenic	L1MD3|LINE|L1	-178974	NR_046634	100873941	Hs.679364	NR_046634	ENSG00000224855	OPA1-AS1	-	OPA1 antisense RNA 1	ncRNA	64.65	15.53	4.162910496	3.66E-16
chr3-1046	chr3	194452793	194454063	+	17.3	1270	"intron (NR_037891, intron 1 of 3)"	"intron (NR_037891, intron 1 of 3)"	24278	NR_037891	100507391	Hs.590099	NR_037891	ENSG00000237222	LINC01968	-	long intergenic non-protein coding RNA 1968	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr3-1048	chr3	194577432	194578432	+	17.3	1000	Intergenic	Intergenic	148782	NR_037891	100507391	Hs.590099	NR_037891	ENSG00000237222	LINC01968	-	long intergenic non-protein coding RNA 1968	ncRNA	17.28	0.97	17.81443299	2.06E-12
chr3-1049	chr3	194656470	194657470	+	16	1000	Intergenic	Intergenic	-158347	NR_104188	100874528	Hs.581659	NR_104188	ENSG00000233303	XXYLT1-AS1	-	XXYLT1 antisense RNA 1	ncRNA	16	3.4	4.705882353	2.25E-05
chr3-1052	chr3	8379542	8380542	+	16.6	1000	"intron (NR_033378, intron 3 of 3)"	MIRc|SINE|MIR	163302	NR_033378	100288428	Hs.651576	NR_033378	ENSG00000227110	LMCD1-AS1	-	LMCD1 antisense RNA 1 (head to head)	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr3-1055	chr3	10403739	10404739	+	16.6	1000	"intron (NM_001330611, intron 9 of 21)"	"intron (NM_001330611, intron 9 of 21)"	32007	NR_030614	100126334		NR_030614	ENSG00000216135	MIR885	MIRN885|hsa-mir-885|mir-885	microRNA 885	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr3-1056	chr3	10411355	10412355	+	16	1000	"intron (NM_001330611, intron 9 of 21)"	"intron (NM_001330611, intron 9 of 21)"	24391	NR_030614	100126334		NR_030614	ENSG00000216135	MIR885	MIRN885|hsa-mir-885|mir-885	microRNA 885	ncRNA	16	2.43	6.58436214	7.90E-07
chr3-1057	chr3	10487359	10488359	+	16	1000	"intron (NM_001330611, intron 2 of 21)"	"intron (NM_001330611, intron 2 of 21)"	-51613	NR_030614	100126334		NR_030614	ENSG00000216135	MIR885	MIRN885|hsa-mir-885|mir-885	microRNA 885	ncRNA	16	3.88	4.12371134	7.91E-05
chr3-1060	chr3	10889478	10890478	+	15.4	1000	"intron (NM_014229, intron 5 of 13)"	"intron (NM_014229, intron 5 of 13)"	32093	NM_014229	6538	Hs.655078	NM_014229	ENSG00000132164	SLC6A11	GAT-3|GAT3|GAT4	solute carrier family 6 member 11	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-1065	chr3	11275620	11276620	+	15.4	1000	"intron (NM_001098211, intron 1 of 1)"	"intron (NM_001098211, intron 1 of 1)"	8451	NM_001098211	3269	Hs.1570	NM_000861	ENSG00000196639	HRH1	H1-R|H1R|HH1R|hisH1	histamine receptor H1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-1067	chr3	11889632	11891598	+	30.1	1966	Intergenic	Intergenic	-2222	NM_001284401	132001	Hs.475472	NM_138807	ENSG00000144559	TAMM41	C3orf31|RAM41|TAM41	TAM41 mitochondrial translocator assembly and maintenance homolog	protein-coding	30.08	0.97	31.01030928	3.12E-26
chr3-1068	chr3	12118078	12119078	+	14.1	1000	"intron (NM_133625, intron 2 of 13)"	"intron (NM_133625, intron 2 of 13)"	72744	NM_133625	6854	Hs.445503	NM_003178	ENSG00000157152	SYN2	SYNII	synapsin II	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr3-1069	chr3	12305359	12306359	+	15.4	1000	Intergenic	Intergenic	-23490	NM_138712	5468	Hs.162646	NM_005037	ENSG00000132170	PPARG	CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma	peroxisome proliferator activated receptor gamma	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr3-1071	chr3	12808174	12809174	+	16.6	1000	"intron (NM_001284406, intron 1 of 11)"	MIR3|SINE|MIR	2282	NM_001284406	55287	Hs.475502	NM_018306	ENSG00000088726	TMEM40	-	transmembrane protein 40	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr3-1076	chr3	13198649	13199649	+	16	1000	Intergenic	Intergenic	-84532	NM_001134382	9922	Hs.475506	NM_014869	ENSG00000144711	IQSEC1	ARF-GEP100|ARFGEP100|BRAG2|GEP100	IQ motif and Sec7 domain 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr3-1079	chr3	13807528	13809266	+	21.1	1738	Intergenic	L2b|LINE|L2	113221	NM_004625	7476	Hs.72290	NM_004625	ENSG00000154764	WNT7A	-	Wnt family member 7A	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr3-1080	chr3	14075613	14076613	+	15.4	1000	"intron (NR_002223, intron 1 of 2)"	L1PREC2|LINE|L1	90258	NM_001098502	131474	Hs.517815	NM_144636	ENSG00000163528	CHCHD4	MIA40|TIMM40	coiled-coil-helix-coiled-coil-helix domain containing 4	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-1082	chr3	14085272	14086272	+	16.6	1000	"intron (NR_002223, intron 1 of 2)"	HERVI-int|LTR|ERV1	80599	NM_001098502	131474	Hs.517815	NM_144636	ENSG00000163528	CHCHD4	MIA40|TIMM40	coiled-coil-helix-coiled-coil-helix domain containing 4	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr3-1083	chr3	14353344	14354344	+	16.6	1000	Intergenic	L2b|LINE|L2	40224	NR_110135	101927565	Hs.306905	NR_110135	ENSG00000251576	LINC01267	-	long intergenic non-protein coding RNA 1267	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr3-1086	chr3	14416014	14417014	+	16.6	1000	Intergenic	MIR3|SINE|MIR	-22446	NR_110135	101927565	Hs.306905	NR_110135	ENSG00000251576	LINC01267	-	long intergenic non-protein coding RNA 1267	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr3-1087	chr3	14659702	14661450	+	26.2	1748	Intergenic	Intergenic	-32677	NR_135523	51244	Hs.517820	NM_016474	ENSG00000154781	CCDC174	C3orf19|HSPC212|IHPM|IHPMR	coiled-coil domain containing 174	protein-coding	26.24	1.94	13.5257732	4.03E-16
chr3-1088	chr3	15157809	15158809	+	16	1000	Intergenic	MLT1B|LTR|ERVL-MaLR	-17645	NR_126155	64145	Hs.475565	NM_022340	ENSG00000131381	RBSN	Rabenosyn-5|ZFYVE20	"rabenosyn, RAB effector"	protein-coding	16	3.88	4.12371134	7.91E-05
chr3-1094	chr3	16169368	16170368	+	15.4	1000	Intergenic	L1MA3|LINE|L1	-45961	NM_001319051	117248	Hs.411308	NM_054110	ENSG00000131386	GALNT15	GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15	polypeptide N-acetylgalactosaminyltransferase 15	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-1095	chr3	16177219	16178219	+	16	1000	Intergenic	Intergenic	-38110	NM_001319051	117248	Hs.411308	NM_054110	ENSG00000131386	GALNT15	GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15	polypeptide N-acetylgalactosaminyltransferase 15	protein-coding	16	1.94	8.24742268	7.67E-08
chr3-1099	chr3	25618790	25619790	+	16.6	1000	"intron (NM_001290217, intron 4 of 7)"	"intron (NM_001290217, intron 4 of 7)"	86573	NM_001068	7155	Hs.475733	NM_001068	ENSG00000077097	TOP2B	TOPIIB|top2beta	topoisomerase (DNA) II beta	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr3-110	chr3	167967427	167968678	+	23.7	1251	"intron (NR_021485, intron 1 of 15)"	CpG	742	NR_021485	93556	Hs.478158	NR_021485		EGFEM1P	C3orf50|NCRNA00259	"EGF like and EMI domain containing 1, pseudogene"	pseudo	23.68	2.91	8.137457045	4.85E-11
chr3-1101	chr3	31932479	31933479	+	16	1000	"intron (NM_017784, intron 1 of 11)"	"intron (NM_017784, intron 1 of 11)"	-90287	NM_001137674	344787	Hs.585139	NM_001137674	ENSG00000197385	ZNF860	-	zinc finger protein 860	protein-coding	16	2.91	5.498281787	4.98E-06
chr3-1104	chr3	36985475	36987330	+	29.4	1855	"5' UTR (NM_014831, exon 1 of 23)"	"5' UTR (NM_014831, exon 1 of 23)"	146	NM_001329998	9881	Hs.170999	NM_014831	ENSG00000168016	TRANK1	LBA1	tetratricopeptide repeat and ankyrin repeat containing 1	protein-coding	29.44	2.43	12.11522634	1.54E-17
chr3-1109	chr3	37510821	37515528	+	96	4707	"intron (NM_002207, intron 2 of 27)"	L2b|LINE|L2	19361	NM_002207	3680	Hs.113157	NM_002207	ENSG00000144668	ITGA9	ALPHA-RLC|ITGA4L|RLC	integrin subunit alpha 9	protein-coding	96.01	13.59	7.064753495	1.02E-37
chr3-1111	chr3	38083508	38085201	+	25	1693	"intron (NM_001321153, intron 1 of 36)"	"intron (NM_001321153, intron 1 of 36)"	3658	NM_007337	9940	Hs.714499	NM_007335	ENSG00000008226	DLEC1	CFAP81|DLC-1|DLC1|F56	deleted in lung and esophageal cancer 1	protein-coding	24.96	5.34	4.674157303	9.72E-08
chr3-1112	chr3	38108233	38109233	+	16	1000	"intron (NM_001321153, intron 6 of 36)"	HAL1|LINE|L1	28037	NM_007337	9940	Hs.714499	NM_007335	ENSG00000008226	DLEC1	CFAP81|DLC-1|DLC1|F56	deleted in lung and esophageal cancer 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr3-1114	chr3	38623765	38625280	+	21.8	1515	"intron (NM_001099405, intron 16 of 26)"	"intron (NM_001099405, intron 16 of 26)"	66641	NM_001099404	6331	Hs.517898	NM_000335	ENSG00000183873	SCN5A	CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1	sodium voltage-gated channel alpha subunit 5	protein-coding	21.76	2.43	8.95473251	2.49E-11
chr3-1116	chr3	38666672	38667672	+	16	1000	"intron (NM_001099405, intron 3 of 26)"	"intron (NM_001099405, intron 3 of 26)"	23991	NM_001099404	6331	Hs.517898	NM_000335	ENSG00000183873	SCN5A	CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1	sodium voltage-gated channel alpha subunit 5	protein-coding	16	3.4	4.705882353	2.25E-05
chr3-1117	chr3	38723976	38724976	+	16.6	1000	Intergenic	Intergenic	-33312	NM_001160160	6331	Hs.517898	NM_000335	ENSG00000183873	SCN5A	CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1	sodium voltage-gated channel alpha subunit 5	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr3-1120	chr3	39199303	39200558	+	16.6	1255	Intergenic	MER21C|LTR|ERVL	-3837	NM_001320560	64651	Hs.370950	NM_033027	ENSG00000144655	CSRNP1	AXUD1|CSRNP-1|FAM130B|TAIP-3|URAX1	cysteine and serine rich nuclear protein 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr3-1122	chr3	39500545	39501545	+	16.6	1000	Intergenic	AluY|SINE|Alu	-8019	NM_001278322	4336	Hs.121333	NM_182935	ENSG00000168314	MOBP	-	myelin-associated oligodendrocyte basic protein	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr3-1125	chr3	40654317	40657921	+	52.5	3604	Intergenic	Intergenic	89750	NM_001098414	285268	Hs.19977	NM_198484	ENSG00000172888	ZNF621	-	zinc finger protein 621	protein-coding	52.49	6.8	7.719117647	8.94E-23
chr3-1126	chr3	41205875	41207283	+	23	1408	Intergenic	Intergenic	-34336	NM_001330729	1499	Hs.476018	NM_001904	ENSG00000168036	CTNNB1	CTNNB|MRD19|armadillo	catenin beta 1	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr3-1131	chr3	42719564	42722197	+	40.3	2633	Intergenic	THE1B|LTR|ERVL-MaLR	-6131	NM_152393	131377	Hs.350288	NM_152393	ENSG00000157119	KLHL40	KBTBD5|NEM8|SRYP|SYRP	kelch like family member 40	protein-coding	40.33	5.82	6.929553265	3.74E-16
chr3-1135	chr3	44097230	44098230	+	16.6	1000	Intergenic	Intergenic	-57974	NR_029700	406929		NR_029700	ENSG00000207954	MIR138-1	MIRN138-1|mir-138-1	microRNA 138-1	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr3-1138	chr3	44150143	44151143	+	15.4	1000	Intergenic	Intergenic	-5061	NR_029700	406929		NR_029700	ENSG00000207954	MIR138-1	MIRN138-1|mir-138-1	microRNA 138-1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr3-1143	chr3	45130890	45131890	+	16.6	1000	"intron (NM_022842, intron 7 of 8)"	"intron (NM_022842, intron 7 of 8)"	56524	NM_022842	64866	Hs.476093	NM_022842	ENSG00000163814	CDCP1	CD318|SIMA135|TRASK	CUB domain containing protein 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr3-1147	chr3	45250837	45253915	+	46.7	3078	Intergenic	Intergenic	15438	NM_015444	25907	Hs.740403	NM_015444	ENSG00000249992	TMEM158	BBP|RIS1|p40BBP	transmembrane protein 158 (gene/pseudogene)	protein-coding	46.73	7.77	6.014157014	1.14E-16
chr3-1148	chr3	45265899	45269834	+	60.8	3935	promoter-TSS (NM_015444)	promoter-TSS (NM_015444)	-52	NM_015444	25907	Hs.740403	NM_015444	ENSG00000249992	TMEM158	BBP|RIS1|p40BBP	transmembrane protein 158 (gene/pseudogene)	protein-coding	60.81	12.62	4.818541997	1.30E-17
chr3-1152	chr3	45379985	45380985	+	16	1000	Intergenic	Intergenic	-49590	NM_015340	23395	Hs.526975	NM_015340	ENSG00000011376	LARS2	HLASA|LEURS|PRLTS4|mtLeuRS	"leucyl-tRNA synthetase 2, mitochondrial"	protein-coding	16	2.91	5.498281787	4.98E-06
chr3-1159	chr3	46510947	46511947	+	16.6	1000	"intron (NM_001321122, intron 2 of 19)"	CT-rich|Low_complexity|Low_complexity	-4794	NM_002343	4057	Hs.529517	NM_002343	ENSG00000012223	LTF	GIG12|HEL110|HLF2|LF	lactotransferrin	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr3-116	chr3	37499855	37500855	+	21.8	1000	"intron (NM_002207, intron 1 of 27)"	"intron (NM_002207, intron 1 of 27)"	6542	NM_002207	3680	Hs.113157	NM_002207	ENSG00000144668	ITGA9	ALPHA-RLC|ITGA4L|RLC	integrin subunit alpha 9	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr3-1161	chr3	46701347	46705201	+	51.2	3854	Intergenic	AluSz|SINE|Alu	31872	NM_001190707	259173	Hs.517937	NM_147129	ENSG00000178038	ALS2CL	RN49018	ALS2 C-terminal like	protein-coding	51.21	4.85	10.55876289	4.33E-27
chr3-1163	chr3	46754069	46755069	+	16	1000	"intron (NM_013270, intron 4 of 5)"	"intron (NM_013270, intron 4 of 5)"	4804	NM_013270	29122	Hs.120365	NM_013270	ENSG00000206549	PRSS50	CT20|TSP50	"protease, serine 50"	protein-coding	16	2.43	6.58436214	7.90E-07
chr3-1164	chr3	46878214	46879748	+	20.5	1534	Intergenic	L1MCc|LINE|L1	-3396	NM_182702	339906	Hs.585127	NM_182702	ENSG00000178055	PRSS42	TESSP2	"protease, serine 42"	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr3-1165	chr3	47620602	47621883	+	18.6	1281	promoter-TSS (NM_001206944)	promoter-TSS (NM_001206944)	488	NM_001206945	10675	Hs.45127	NM_006574	ENSG00000114646	CSPG5	NGC	chondroitin sulfate proteoglycan 5	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr3-1169	chr3	50256259	50257259	+	16	1000	"intron (NM_006841, intron 14 of 15)"	MIRc|SINE|MIR	-7361	NM_001282619	2771	Hs.77269	NM_002070	ENSG00000114353	GNAI2	GIP|GNAI2B|H_LUCA15.1|H_LUCA16.1	G protein subunit alpha i2	protein-coding	16	1.46	10.95890411	3.44E-09
chr3-117	chr3	39030927	39032645	+	32.6	1718	Intergenic	Intergenic	-36644	NM_001287223	11280	Hs.591657	NM_014139	ENSG00000168356	SCN11A	FEPS3|HSAN7|NAV1.9|NaN|PN5|SCN12A|SNS-2	sodium voltage-gated channel alpha subunit 11	protein-coding	32.64	4.85	6.729896907	5.03E-13
chr3-1173	chr3	50551545	50554451	+	44.2	2906	Intergenic	Intergenic	-11323	NM_001291101	9254	Hs.476273	NM_006030	ENSG00000007402	CACNA2D2	CACNA2D	calcium voltage-gated channel auxiliary subunit alpha2delta 2	protein-coding	44.17	4.85	9.107216495	4.10E-21
chr3-1175	chr3	50730559	50733910	+	44.2	3351	"intron (NM_004947, intron 1 of 52)"	AluSz6|SINE|Alu	19562	NM_004947	1795	Hs.476284	NM_004947	ENSG00000088538	DOCK3	MOCA|PBP	dedicator of cytokinesis 3	protein-coding	44.17	9.71	4.548918641	1.81E-12
chr3-1176	chr3	50813358	50814358	+	16.6	1000	"intron (NM_004947, intron 1 of 52)"	L1PB2|LINE|L1	101186	NM_004947	1795	Hs.476284	NM_004947	ENSG00000088538	DOCK3	MOCA|PBP	dedicator of cytokinesis 3	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr3-1181	chr3	53596595	53597877	+	18.6	1282	"intron (NM_001128840, intron 3 of 47)"	L1ME3B|LINE|L1	68160	NM_000720	776	Hs.476358	NM_000720	ENSG00000157388	CACNA1D	CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD	calcium voltage-gated channel subunit alpha1 D	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr3-1183	chr3	53712568	53713568	+	14.7	1000	"intron (NM_000720, intron 8 of 48)"	AluSq2|SINE|Alu	167352	NM_018397	55349	Hs.126688	NM_018397	ENSG00000016391	CHDH	-	choline dehydrogenase	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr3-1186	chr3	53853550	53854550	+	15.4	1000	"intron (NM_018397, intron 6 of 8)"	"intron (NM_018397, intron 6 of 8)"	26370	NM_018397	55349	Hs.126688	NM_018397	ENSG00000016391	CHDH	-	choline dehydrogenase	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-1190	chr3	54292872	54293872	+	14.1	1000	"intron (NM_018398, intron 2 of 37)"	"intron (NM_018398, intron 2 of 37)"	136679	NM_018398	55799	Hs.656687	NM_018398	ENSG00000157445	CACNA2D3	HSA272268	calcium voltage-gated channel auxiliary subunit alpha2delta 3	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr3-1193	chr3	58628506	58629506	+	16.6	1000	"intron (NM_138805, intron 6 of 9)"	L2b|LINE|L2	-15669	NM_001282714	11170	Hs.506357	NM_007177	ENSG00000168309	FAM107A	DRR1|TU3A	family with sequence similarity 107 member A	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr3-1196	chr3	59752126	59756012	+	57.6	3886	"intron (NM_002012, intron 8 of 9)"	"intron (NM_002012, intron 8 of 9)"	312784	NM_001320901	2272	Hs.655995	NM_002012	ENSG00000189283	FHIT	AP3Aase|FRA3B	fragile histidine triad	protein-coding	57.61	8.74	6.591533181	3.65E-22
chr3-1198	chr3	59788861	59789861	+	16.6	1000	"intron (NM_002012, intron 8 of 9)"	"intron (NM_002012, intron 8 of 9)"	277492	NM_001320901	2272	Hs.655995	NM_002012	ENSG00000189283	FHIT	AP3Aase|FRA3B	fragile histidine triad	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr3-1200	chr3	62179864	62180864	+	16.6	1000	"intron (NM_002841, intron 9 of 29)"	AluSx1|SINE|Alu	124258	NR_038281	100506994	Hs.656620	NR_038281	ENSG00000241472	PTPRG-AS1	-	PTPRG antisense RNA 1	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr3-1201	chr3	62662370	62663370	+	16	1000	"intron (NM_183394, intron 3 of 27)"	"intron (NM_183394, intron 3 of 27)"	198194	NM_003716	8618	Hs.654933	NM_003716	ENSG00000163618	CADPS	CADPS1|CAPS|CAPS1|UNC-31	calcium dependent secretion activator	protein-coding	16	1.94	8.24742268	7.67E-08
chr3-1202	chr3	64144917	64145917	+	16	1000	"intron (NM_198859, intron 4 of 7)"	L2a|LINE|L2	-27803	NR_046702	100874243	Hs.670840	NR_046702	ENSG00000226017	PRICKLE2-AS3	-	PRICKLE2 antisense RNA 3	ncRNA	16	3.88	4.12371134	7.91E-05
chr3-1203	chr3	64155819	64157146	+	19.8	1327	"intron (NM_198859, intron 2 of 7)"	AluJb|SINE|Alu	-16738	NR_046702	100874243	Hs.670840	NR_046702	ENSG00000226017	PRICKLE2-AS3	-	PRICKLE2 antisense RNA 3	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr3-1206	chr3	66005644	66007851	+	37.1	2207	"intron (NM_015520, intron 1 of 24)"	"intron (NM_015520, intron 1 of 24)"	17762	NM_015520	9223	Hs.476636	NM_004742	ENSG00000151276	MAGI1	AIP-3|AIP3|BAIAP1|BAP-1|BAP1|MAGI-1|Magi1d|TNRC19|WWP3	"membrane associated guanylate kinase, WW and PDZ domain containing 1"	protein-coding	37.12	6.31	5.882725832	1.20E-13
chr3-1208	chr3	66023319	66024319	+	16	1000	"exon (NM_004742, exon 1 of 23)"	"exon (NM_004742, exon 1 of 23)"	690	NM_015520	9223	Hs.476636	NM_004742	ENSG00000151276	MAGI1	AIP-3|AIP3|BAIAP1|BAP-1|BAP1|MAGI-1|Magi1d|TNRC19|WWP3	"membrane associated guanylate kinase, WW and PDZ domain containing 1"	protein-coding	16	0.97	16.49484536	3.54E-11
chr3-1211	chr3	66551738	66552738	+	15.4	1000	Intergenic	AluSx|SINE|Alu	-1393	NM_015541	26018	Hs.518055	NM_015541	ENSG00000144749	LRIG1	LIG-1|LIG1	leucine rich repeats and immunoglobulin like domains 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-1212	chr3	69433670	69436290	+	55.7	2620	"exon (NM_015123, exon 1 of 23)"	"exon (NM_015123, exon 1 of 23)"	475	NM_015123	23150	Hs.371681	NM_015123	ENSG00000114541	FRMD4B	6030440G05Rik|GRSP1	FERM domain containing 4B	protein-coding	55.69	10.19	5.465161923	3.91E-18
chr3-1213	chr3	69791479	69792747	+	20.5	1268	"intron (NM_198159, intron 1 of 9)"	L2a|LINE|L2	3527	NM_198159	4286	Hs.166017	NM_000248	ENSG00000187098	MITF	CMM8|MI|WS2|WS2A|bHLHe32	melanogenesis associated transcription factor	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr3-1215	chr3	71650008	71651008	+	16	1000	Intergenic	MIRb|SINE|MIR	-17368	NM_001244810	27086	Hs.59368	NM_032682	ENSG00000114861	FOXP1	12CC4|HSPC215|MFH|QRF1|hFKH1B	forkhead box P1	protein-coding	16	2.43	6.58436214	7.90E-07
chr3-1216	chr3	71771707	71775898	+	87.1	4191	"intron (NM_001282886, intron 2 of 7)"	L2b|LINE|L2	724	NM_001134651	317649	Hs.581355	NM_173359	ENSG00000163412	EIF4E3	eIF-4E3|eIF4E-3	eukaryotic translation initiation factor 4E family member 3	protein-coding	87.05	10.19	8.542688911	2.96E-39
chr3-1217	chr3	71848653	71849653	+	16.6	1000	Intergenic	Intergenic	-14796	NM_021935	60675	Hs.528665	NM_021935	ENSG00000163421	PROK2	BV8|HH4|KAL4|MIT1|PK2	prokineticin 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr3-122	chr3	126851796	126853061	+	21.8	1265	Intergenic	MLT1D|LTR|ERVL-MaLR	-59546	NM_001007534	285311	Hs.591284	NM_001007534		C3orf56	-	chromosome 3 open reading frame 56	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr3-1221	chr3	98698057	98699057	+	16.6	1000	Intergenic	Intergenic	-78024	NM_080927	131566	Hs.203691	NM_080927	ENSG00000057019	DCBLD2	CLCP1|ESDN	"discoidin, CUB and LCCL domain containing 2"	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr3-1227	chr3	100563721	100564721	+	16.6	1000	"intron (NM_015429, intron 18 of 34)"	"intron (NM_015429, intron 18 of 34)"	135835	NM_001195478	10342	Hs.518123	NM_006070	ENSG00000114354	TFG	HMSNP|SPG57|TF6|TRKT3	TRK-fused gene	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr3-1228	chr3	115439600	115440600	+	16.6	1000	"3' UTR (NM_002045, exon 3 of 3)"	"3' UTR (NM_002045, exon 3 of 3)"	97949	NM_001130064	2596	Hs.134974	NM_002045	ENSG00000172020	GAP43	B-50|PP46	growth associated protein 43	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr3-1229	chr3	121818218	121819218	+	16.6	1000	"intron (NM_001206924, intron 2 of 5)"	MER3|DNA|hAT-Charlie	22022	NM_176892	942	Hs.171182	NM_006889	ENSG00000114013	CD86	B7-2|B7.2|B70|CD28LG2|LAB72	CD86 molecule	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr3-1230	chr3	121975990	121976990	+	15.4	1000	"intron (NM_001178065, intron 3 of 6)"	"intron (NM_001178065, intron 3 of 6)"	-67521	NM_005213	1475	Hs.518198	NM_005213	ENSG00000121552	CSTA	AREI|PSS4|STF1|STFA	cystatin A	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr3-1231	chr3	123038128	123041554	+	58.2	3426	"intron (NM_183357, intron 8 of 20)"	"intron (NM_183357, intron 8 of 20)"	95348	NM_001199642	111	Hs.593292	NM_183357	ENSG00000173175	ADCY5	AC5|FDFM	adenylate cyclase 5	protein-coding	58.25	11.65	5	1.67E-17
chr3-1233	chr3	123096575	123098495	+	34.6	1920	"intron (NM_183357, intron 1 of 20)"	"intron (NM_183357, intron 1 of 20)"	37654	NM_001199642	111	Hs.593292	NM_183357	ENSG00000173175	ADCY5	AC5|FDFM	adenylate cyclase 5	protein-coding	34.56	2.91	11.87628866	4.47E-20
chr3-1237	chr3	123167273	123169561	+	33.3	2288	Intergenic	CpG-18829	-1025	NM_183357	111	Hs.593292	NM_183357	ENSG00000173175	ADCY5	AC5|FDFM	adenylate cyclase 5	protein-coding	33.28	4.85	6.86185567	7.28E-14
chr3-1240	chr3	123709030	123710030	+	16	1000	"intron (NR_133917, intron 1 of 2)"	"intron (NR_133917, intron 1 of 2)"	669	NM_017578	54763	Hs.567516	NM_017578	ENSG00000065371	ROPN1	CT91|ODF6|RHPNAP1|ROPN1A|ropporin	rhophilin associated tail protein 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr3-1241	chr3	123723044	123724044	+	16.6	1000	Intergenic	Intergenic	-12527	NR_133917	54763	Hs.567516	NM_017578	ENSG00000065371	ROPN1	CT91|ODF6|RHPNAP1|ROPN1A|ropporin	rhophilin associated tail protein 1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr3-1244	chr3	124567458	124568458	+	15.4	1000	"intron (NM_002213, intron 3 of 14)"	"intron (NM_002213, intron 3 of 14)"	38194	NM_002213	3693	Hs.13155	NM_002213	ENSG00000082781	ITGB5	-	integrin subunit beta 5	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-1249	chr3	124925869	124926869	+	15.4	1000	"intron (NM_024628, intron 2 of 13)"	L2a|LINE|L2	3874	NM_001195483	84561	Hs.658514	NM_024628	ENSG00000221955	SLC12A8	CCC9	solute carrier family 12 member 8	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-1254	chr3	127172687	127176054	+	57.6	3367	Intergenic	Intergenic	-64857	NR_110147	101927123	Hs.526761	NR_110147	ENSG00000244215	LINC02016	-	long intergenic non-protein coding RNA 2016	ncRNA	57.61	5.82	9.89862543	3.99E-29
chr3-1255	chr3	127188820	127190540	+	25.6	1720	Intergenic	Intergenic	66943	NR_125397	101927149	Hs.407798	NR_125397	ENSG00000239921	LINC01471	-	long intergenic non-protein coding RNA 1471	ncRNA	25.6	4.37	5.85812357	7.40E-10
chr3-1256	chr3	127247582	127248582	+	16.6	1000	"intron (NR_125397, intron 5 of 6)"	L1MDa|LINE|L1	8541	NR_125397	101927149	Hs.407798	NR_125397	ENSG00000239921	LINC01471	-	long intergenic non-protein coding RNA 1471	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr3-1257	chr3	127437165	127438843	+	26.2	1678	"intron (NM_001003794, intron 5 of 7)"	"intron (NM_001003794, intron 5 of 7)"	46223	NR_033429	80325	Hs.107812	NM_032548	ENSG00000114626	ABTB1	BPOZ|BTB3|BTBD21|EF1ABP|PP2259	ankyrin repeat and BTB domain containing 1	protein-coding	26.24	4.85	5.410309278	4.26E-09
chr3-1258	chr3	127500167	127501434	+	20.5	1267	"intron (NM_001003794, intron 2 of 7)"	AluSx|SINE|Alu	40925	NM_007283	11343	Hs.277035	NM_007283	ENSG00000074416	MGLL	HU-K5|HUK5|MAGL|MGL	monoglyceride lipase	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr3-1261	chr3	127676793	127678282	+	23	1489	"intron (NM_207335, intron 3 of 4)"	"intron (NM_207335, intron 3 of 4)"	35635	NM_207335	166348	Hs.132087	NM_207335	ENSG00000187715	KBTBD12	KLHDC6	kelch repeat and BTB domain containing 12	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr3-1263	chr3	128193653	128194653	+	16	1000	Intergenic	Intergenic	-8062	NM_153330	165721	Hs.518241	NM_153330	ENSG00000179407	DNAJB8	CT156|DJ6	DnaJ heat shock protein family (Hsp40) member B8	protein-coding	16	2.91	5.498281787	4.98E-06
chr3-1266	chr3	128271561	128272561	+	16	1000	Intergenic	L2b|LINE|L2	22868	NR_125802	23434	Hs.194283	NM_007354	ENSG00000198685	LINC01565	C3orf27|GR6	long intergenic non-protein coding RNA 1565	ncRNA	16	2.91	5.498281787	4.98E-06
chr3-1268	chr3	129324274	129325274	+	16.6	1000	"exon (NM_015103, exon 1 of 36)"	"exon (NM_015103, exon 1 of 36)"	808	NM_015103	23129	Hs.301685	NM_015103	ENSG00000004399	PLXND1	PLEXD1	plexin D1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr3-1271	chr3	130062834	130063834	+	16	1000	Intergenic	Intergenic	-1025	NM_001278298	256076	Hs.205403	NM_153264	ENSG00000172752	COL6A5	COL29A1|VWA4	collagen type VI alpha 5 chain	protein-coding	16	2.43	6.58436214	7.90E-07
chr3-1272	chr3	131956742	131957742	+	15.4	1000	Intergenic	MLT2F|LTR|ERVL	-78969	NM_001099	55	Hs.433060	NM_001099	ENSG00000014257	ACPP	5'-NT|ACP-3|ACP3	"acid phosphatase, prostate"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-1274	chr3	133188939	133189939	+	16	1000	"intron (NM_003571, intron 5 of 6)"	"intron (NM_003571, intron 5 of 6)"	-14819	NR_135278	85003	Hs.659202	NR_135276	ENSG00000249993	BFSP2-AS1	-	BFSP2 antisense RNA 1	ncRNA	16	3.88	4.12371134	7.91E-05
chr3-1275	chr3	133589633	133591212	+	26.2	1579	"intron (NM_016577, intron 1 of 7)"	"intron (NM_016577, intron 1 of 7)"	24269	NM_016577	51560	Hs.715344	NM_016577	ENSG00000154917	RAB6B	-	"RAB6B, member RAS oncogene family"	protein-coding	26.24	0.97	27.05154639	7.61E-22
chr3-1276	chr3	133629437	133630437	+	16	1000	Intergenic	THE1B|LTR|ERVL-MaLR	-15246	NM_016577	51560	Hs.715344	NM_016577	ENSG00000154917	RAB6B	-	"RAB6B, member RAS oncogene family"	protein-coding	16	1.94	8.24742268	7.67E-08
chr3-1277	chr3	133746500	133748516	+	33.9	2016	"intron (NM_005630, intron 1 of 13)"	"intron (NM_005630, intron 1 of 13)"	1412	NM_005630	6578	Hs.518270	NM_005630	ENSG00000174640	SLCO2A1	MATR1|OATP2A1|PGT|PHOAR2|SLC21A2	solute carrier organic anion transporter family member 2A1	protein-coding	33.92	2.91	11.65635739	5.32E-19
chr3-1280	chr3	135343910	135344910	+	16	1000	Intergenic	Intergenic	-340105	NM_001190447	5523	Hs.518155	NM_002718	ENSG00000073711	PPP2R3A	PPP2R3|PR130|PR72	protein phosphatase 2 regulatory subunit B''alpha	protein-coding	16	2.91	5.498281787	4.98E-06
chr3-1283	chr3	138088007	138089007	+	16	1000	"intron (NM_001252090, intron 1 of 5)"	"intron (NM_001252090, intron 1 of 5)"	20537	NM_001252090	22808	Hs.527021	NM_012219	ENSG00000158186	MRAS	M-RAs|R-RAS3|RRAS3	muscle RAS oncogene homolog	protein-coding	16	0.97	16.49484536	3.54E-11
chr3-1284	chr3	138108590	138109590	+	15.4	1000	"intron (NM_012219, intron 2 of 5)"	"intron (NM_012219, intron 2 of 5)"	41120	NM_001252090	22808	Hs.527021	NM_012219	ENSG00000158186	MRAS	M-RAs|R-RAS3|RRAS3	muscle RAS oncogene homolog	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr3-1285	chr3	138132035	138133035	+	16	1000	Intergenic	Tigger3a|DNA|TcMar-Tigger	-20880	NR_136409	83850	Hs.477711	NM_031913	ENSG00000158220	ESYT3	CHR3SYT|E-Syt3|FAM62C	extended synaptotagmin 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr3-1291	chr3	140812358	140813358	+	16	1000	"intron (NM_080862, intron 2 of 2)"	"intron (NM_080862, intron 2 of 2)"	42614	NM_080862	92369	Hs.655112	NM_080862	ENSG00000175093	SPSB4	SSB-4|SSB4	splA/ryanodine receptor domain and SOCS box containing 4	protein-coding	16	3.88	4.12371134	7.91E-05
chr3-1296	chr3	141378561	141379817	+	18.6	1256	Intergenic	CpG	-2852	NR_136190	646730	Hs.570677	NR_136190		LOC646730	-	uncharacterized LOC646730	ncRNA	18.56	2.43	7.637860082	1.53E-08
chr3-1298	chr3	144060616	144061902	+	19.8	1286	Intergenic	Intergenic	369092	NM_001134470	205428	Hs.288954	NM_173552	ENSG00000181744	C3orf58	DIA1|GoPro49|HASF	chromosome 3 open reading frame 58	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr3-1299	chr3	149271292	149272292	+	16	1000	"intron (NM_015472, intron 3 of 6)"	"intron (NM_015472, intron 3 of 6)"	79424	NM_004617	7104	Hs.133527	NM_004617	ENSG00000169903	TM4SF4	ILTMP|il-TMP	transmembrane 4 L six family member 4	protein-coding	16	2.43	6.58436214	7.90E-07
chr3-1301	chr3	155857694	155858694	+	16	1000	"intron (NM_172160, intron 1 of 13)"	MLT1A0|LTR|ERVL-MaLR	-2557	NM_003471	7881	Hs.654519	NM_003471	ENSG00000169282	KCNAB1	AKR6A3|KCNA1B|KV-BETA-1|Kvb1.3|hKvBeta3|hKvb3	potassium voltage-gated channel subfamily A member regulatory beta subunit 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr3-1302	chr3	156118533	156120113	+	28.8	1580	"intron (NM_172159, intron 1 of 13)"	"intron (NM_172159, intron 1 of 13)"	45402	NR_046618	100874084	Hs.131282	NR_046618	ENSG00000242370	KCNAB1-AS1	-	KCNAB1 antisense RNA 1	ncRNA	28.8	4.37	6.590389016	1.84E-11
chr3-1305	chr3	156543660	156544660	+	16	1000	promoter-TSS (NM_001004316)	promoter-TSS (NM_001004316)	12	NM_001193283	389170	Hs.478048	NM_001004316	ENSG00000197980	LEKR1	-	"leucine, glutamate and lysine rich 1"	protein-coding	16	3.4	4.705882353	2.25E-05
chr3-1309	chr3	159667015	159668015	+	16.6	1000	"intron (NR_108088, intron 9 of 9)"	"intron (NR_108088, intron 9 of 9)"	-39108	NM_000882	3592	Hs.673	NM_000882	ENSG00000168811	IL12A	CLMF|IL-12A|NFSK|NKSF1|P35	interleukin 12A	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr3-1311	chr3	159830156	159831156	+	15.4	1000	"intron (NR_108088, intron 3 of 9)"	MIR3|SINE|MIR	92220	NR_104132	730109	Hs.99333	NR_104132		LINC01100	-	long intergenic non-protein coding RNA 1100	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr3-1312	chr3	161031006	161032739	+	25.6	1733	Intergenic	MSTB2|LTR|ERVL-MaLR	57999	NM_001040100	165679	Hs.369104	NM_145035	ENSG00000196542	SPTSSB	ADMP|C3orf57|SSSPTB	serine palmitoyltransferase small subunit B	protein-coding	25.6	4.37	5.85812357	7.40E-10
chr3-1316	chr3	161145932	161146932	+	16.6	1000	"intron (NR_102265, intron 1 of 3)"	"intron (NR_102265, intron 1 of 3)"	2217	NR_102265	101243545	Hs.737526	NR_102265	ENSG00000240567	LINC02067	-	long intergenic non-protein coding RNA 2067	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr3-1317	chr3	167811749	167814210	+	39	2461	"exon (NM_001308155, exon 1 of 15)"	"exon (NM_001308155, exon 1 of 15)"	734	NM_014498	27333	Hs.143600	NM_014498	ENSG00000173905	GOLIM4	GIMPC|GOLPH4|GPP130|P138	golgi integral membrane protein 4	protein-coding	39.04	3.4	11.48235294	1.51E-21
chr3-1319	chr3	168864201	168865201	+	16	1000	promoter-TSS (NM_001105077)	promoter-TSS (NM_001105077)	-301	NM_001105078	2122	Hs.744090	NM_004991	ENSG00000085276	MECOM	AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2	MDS1 and EVI1 complex locus	protein-coding	16	1.94	8.24742268	7.67E-08
chr3-132	chr3	157824206	157825805	+	27.5	1599	Intergenic	Intergenic	-1053	NM_001163678	6474	Hs.55967	NM_003030	ENSG00000168779	SHOX2	OG12|OG12X|SHOT	short stature homeobox 2	protein-coding	27.52	4.37	6.297482838	1.19E-10
chr3-1321	chr3	173113730	173116835	+	46.7	3105	promoter-TSS (NM_014932)	promoter-TSS (NM_014932)	-956	NM_014932	22871	Hs.478289	NM_014932	ENSG00000169760	NLGN1	NL1	neuroligin 1	protein-coding	46.73	7.28	6.418956044	1.62E-17
chr3-1325	chr3	181440234	181441651	+	23.7	1417	"intron (NR_004053, intron 4 of 4)"	"intron (NR_004053, intron 4 of 4)"	11230	NM_003106	6657	Hs.518438	NM_003106	ENSG00000181449	SOX2	ANOP3|MCOPS3	SRY-box 2	protein-coding	23.68	1.94	12.20618557	6.71E-14
chr3-1326	chr3	181962497	181963497	+	16.6	1000	Intergenic	Intergenic	241153	NR_040105	401103	Hs.591304	NR_040105	ENSG00000241098	LINC01994	-	long intergenic non-protein coding RNA 1994	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr3-1330	chr3	183757482	183758482	+	16	1000	TTS (NM_182537)	TTS (NM_182537)	7363	NM_001163646	200909	Hs.448004	NM_182537	ENSG00000186090	HTR3D	5HT3D	5-hydroxytryptamine receptor 3D	protein-coding	16	1.94	8.24742268	7.67E-08
chr3-1332	chr3	183921859	183922859	+	16.6	1000	Intergenic	Charlie19a|DNA|hAT-Charlie	18496	NM_018358	55324	Hs.361323	NM_018358	ENSG00000161204	ABCF3	EST201864	ATP binding cassette subfamily F member 3	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr3-1344	chr3	185110496	185111496	+	13.4	1000	"intron (NM_004721, intron 1 of 13)"	LTR37A|LTR|ERV1	30160	NM_004721	9175	Hs.591306	NM_004721	ENSG00000073803	MAP3K13	LZK|MEKK13|MLK	mitogen-activated protein kinase kinase kinase 13	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr3-1351	chr3	188845566	188846566	+	16.6	1000	Intergenic	Intergenic	-43697	NM_198485	285386	Hs.729544	NM_198485	ENSG00000188001	TPRG1	FAM79B	tumor protein p63 regulated 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr3-1360	chr3	193778603	193781518	+	37.1	2915	"intron (NR_136181, intron 1 of 3)"	"intron (NR_136181, intron 1 of 3)"	7258	NR_136181	285389	Hs.157102	NR_136179	ENSG00000230102	LINC02028	-	long intergenic non-protein coding RNA 2028	ncRNA	37.12	7.28	5.098901099	3.68E-12
chr3-1362	chr3	194408629	194409985	+	21.8	1356	"3' UTR (NM_153690, exon 1 of 1)"	"3' UTR (NM_153690, exon 1 of 1)"	2685	NM_153690	131583	Hs.435080	NM_153690	ENSG00000185112	FAM43A	-	family with sequence similarity 43 member A	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr3-1369	chr3	3230938	3232378	+	16.6	1440	Intergenic	Intergenic	-10257	NM_001173482	51185	Hs.18925	NM_016302	ENSG00000113851	CRBN	MRT2|MRT2A	cereblon	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr3-1370	chr3	4526578	4527841	+	19.2	1263	Intergenic	Intergenic	7638	NR_108075	100996539	Hs.190365	NR_108075		ITPR1-AS1	-	ITPR1 antisense RNA 1 (head to head)	ncRNA	19.2	0.97	19.79381443	5.65E-15
chr3-1371	chr3	5138105	5139424	+	20.5	1319	Intergenic	AluJr4|SINE|Alu	-25166	NM_018184	55207	Hs.250009	NM_018184	ENSG00000134108	ARL8B	ARL10C|Gie1	ADP ribosylation factor like GTPase 8B	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr3-1374	chr3	8683917	8684917	+	14.7	1000	"intron (NM_001256749, intron 1 of 11)"	"intron (NM_001256749, intron 1 of 11)"	2067	NR_046358	51066	Hs.736935	NM_015931	ENSG00000125046	SSUH2	C3orf32|SSU-2|fls485	ssu-2 homolog (C. elegans)	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr3-1375	chr3	9161910	9163203	+	19.2	1293	"intron (NM_001033117, intron 2 of 21)"	"intron (NM_001033117, intron 2 of 21)"	-71621	NR_121664	101927416	Hs.475364	NR_121663	ENSG00000228723	SRGAP3-AS2	-	SRGAP3 antisense RNA 2	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr3-1376	chr3	9238121	9239870	+	26.9	1749	"intron (NM_001033117, intron 1 of 21)"	"intron (NM_001033117, intron 1 of 21)"	4818	NR_121663	101927416	Hs.475364	NR_121663	ENSG00000228723	SRGAP3-AS2	-	SRGAP3 antisense RNA 2	ncRNA	26.88	2.43	11.0617284	2.19E-15
chr3-1381	chr3	10548153	10549153	+	13.4	1000	Intergenic	Intergenic	-1279	NM_001330611	491	Hs.268942	NM_001683	ENSG00000157087	ATP2B2	PMCA2|PMCA2a|PMCA2i	ATPase plasma membrane Ca2+ transporting 2	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr3-1384	chr3	10977523	10978523	+	15.4	1000	"intron (NM_014229, intron 13 of 13)"	MIR|SINE|MIR	-56397	NM_003042	6529	Hs.443874	NM_003042	ENSG00000157103	SLC6A1	GABATHG|GABATR|GAT1|MAE	solute carrier family 6 member 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr3-1385	chr3	10999576	11000576	+	15.4	1000	Intergenic	Intergenic	-34344	NM_003042	6529	Hs.443874	NM_003042	ENSG00000157103	SLC6A1	GABATHG|GABATR|GAT1|MAE	solute carrier family 6 member 1	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr3-1386	chr3	11057185	11058750	+	23.7	1565	"intron (NM_003042, intron 2 of 15)"	MIR|SINE|MIR	2943	NR_046647	100874090	Hs.628542	NR_046647	ENSG00000232287	SLC6A1-AS1	-	SLC6A1 antisense RNA 1	ncRNA	23.68	3.88	6.103092784	4.22E-09
chr3-1387	chr3	11062566	11063566	+	16	1000	"intron (NM_003042, intron 6 of 15)"	"intron (NM_003042, intron 6 of 15)"	-2156	NR_046647	100874090	Hs.628542	NR_046647	ENSG00000232287	SLC6A1-AS1	-	SLC6A1 antisense RNA 1	ncRNA	16	3.4	4.705882353	2.25E-05
chr3-1391	chr3	12470862	12471862	+	15.4	1000	"intron (NM_138712, intron 7 of 7)"	"intron (NM_138712, intron 7 of 7)"	-54569	NM_001321278	80746	Hs.335550	NM_025265	ENSG00000154743	TSEN2	PCH2B|SEN2|SEN2L	tRNA splicing endonuclease subunit 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-1393	chr3	12483585	12484585	+	15.4	1000	Intergenic	Intergenic	-41846	NM_001321278	80746	Hs.335550	NM_025265	ENSG00000154743	TSEN2	PCH2B|SEN2|SEN2L	tRNA splicing endonuclease subunit 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-1396	chr3	13144354	13146898	+	36.5	2544	Intergenic	L2c|LINE|L2	-31009	NM_001134382	9922	Hs.475506	NM_014869	ENSG00000144711	IQSEC1	ARF-GEP100|ARFGEP100|BRAG2|GEP100	IQ motif and Sec7 domain 1	protein-coding	36.48	4.37	8.347826087	1.03E-16
chr3-1404	chr3	13737785	13738785	+	14.1	1000	"intron (NR_027103, intron 2 of 5)"	"intron (NR_027103, intron 2 of 5)"	46064	NR_027103	285375	Hs.319969	NR_027103	ENSG00000224514	LINC00620	-	long intergenic non-protein coding RNA 620	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr3-1408	chr3	14121301	14122614	+	19.2	1313	Intergenic	MER57A1|LTR|ERV1	44414	NM_001098502	131474	Hs.517815	NM_144636	ENSG00000163528	CHCHD4	MIA40|TIMM40	coiled-coil-helix-coiled-coil-helix domain containing 4	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr3-1412	chr3	14566532	14567532	+	14.7	1000	"exon (NM_001080423, exon 3 of 25)"	"exon (NM_001080423, exon 3 of 25)"	14818	NM_001080423	80852	Hs.517819	NM_001080423	ENSG00000144596	GRIP2	-	glutamate receptor interacting protein 2	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr3-1417	chr3	15161209	15162493	+	21.8	1284	Intergenic	Intergenic	-21187	NR_126155	64145	Hs.475565	NM_022340	ENSG00000131381	RBSN	Rabenosyn-5|ZFYVE20	"rabenosyn, RAB effector"	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr3-1418	chr3	15342405	15345475	+	35.8	3070	"intron (NM_001018009, intron 3 of 8)"	"intron (NM_001018009, intron 3 of 8)"	30196	NM_004844	9467	Hs.257761	NM_004844	ENSG00000131370	SH3BP5	SAB|SH3BP-5	SH3 domain binding protein 5	protein-coding	35.84	5.82	6.158075601	1.09E-13
chr3-1420	chr3	16215983	16216983	+	15.4	1000	"5' UTR (NM_054110, exon 1 of 10)"	"5' UTR (NM_054110, exon 1 of 10)"	299	NM_054110	117248	Hs.411308	NM_054110	ENSG00000131386	GALNT15	GALNACT15|GALNT13|GALNT7|GALNTL2|PIH5|pp-GalNAc-T15	polypeptide N-acetylgalactosaminyltransferase 15	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-1423	chr3	18928630	18929630	+	16	1000	Intergenic	Intergenic	-260887	NM_144633	131096	Hs.475656	NM_144633	ENSG00000183960	KCNH8	ELK|ELK1|Kv12.1|elk3	potassium voltage-gated channel subfamily H member 8	protein-coding	16	3.88	4.12371134	7.91E-05
chr3-1425	chr3	27760345	27763074	+	30.7	2729	"exon (NM_005442, exon 2 of 6)"	"exon (NM_005442, exon 2 of 6)"	2497	NM_001278182	8320	Hs.591663	NM_005442	ENSG00000163508	EOMES	TBR2	eomesodermin	protein-coding	30.72	3.88	7.917525773	3.25E-14
chr3-1426	chr3	27767523	27772066	+	74.9	4543	Intergenic	L2b|LINE|L2	-5588	NM_001278183	8320	Hs.591663	NM_005442	ENSG00000163508	EOMES	TBR2	eomesodermin	protein-coding	74.89	12.62	5.934231379	1.17E-25
chr3-1429	chr3	32148906	32151986	+	42.9	3080	"intron (NM_015141, intron 1 of 7)"	AluY|SINE|Alu	2443	NM_015141	23171	Hs.82432	NM_015141	ENSG00000152642	GPD1L	GPD1-L	glycerol-3-phosphate dehydrogenase 1-like	protein-coding	42.89	9.22	4.651843818	2.16E-12
chr3-1432	chr3	32161263	32162263	+	16	1000	"intron (NM_015141, intron 1 of 7)"	AluSc|SINE|Alu	13760	NM_015141	23171	Hs.82432	NM_015141	ENSG00000152642	GPD1L	GPD1-L	glycerol-3-phosphate dehydrogenase 1-like	protein-coding	16	3.88	4.12371134	7.91E-05
chr3-1433	chr3	32166308	32168162	+	28.2	1854	"intron (NM_015141, intron 1 of 7)"	L2b|LINE|L2	19232	NM_015141	23171	Hs.82432	NM_015141	ENSG00000152642	GPD1L	GPD1-L	glycerol-3-phosphate dehydrogenase 1-like	protein-coding	28.16	3.88	7.257731959	1.97E-12
chr3-1434	chr3	36974766	36975766	+	15.4	1000	"intron (NM_001329998, intron 1 of 23)"	"intron (NM_001329998, intron 1 of 23)"	11282	NM_001329998	9881	Hs.170999	NM_014831	ENSG00000168016	TRANK1	LBA1	tetratricopeptide repeat and ankyrin repeat containing 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr3-1446	chr3	38076704	38078131	+	21.8	1427	Intergenic	MER30B|DNA|hAT-Charlie	-3279	NM_001321153	9940	Hs.714499	NM_007335	ENSG00000008226	DLEC1	CFAP81|DLC-1|DLC1|F56	deleted in lung and esophageal cancer 1	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr3-1448	chr3	38350924	38351924	+	16	1000	"intron (NM_001320033, intron 5 of 10)"	MIRb|SINE|MIR	3997	NM_004803	9389	Hs.165559	NM_004803	ENSG00000144671	SLC22A14	OCTL2|OCTL4|ORCTL4	solute carrier family 22 member 14	protein-coding	16	3.88	4.12371134	7.91E-05
chr3-1450	chr3	38635662	38636662	+	14.7	1000	"intron (NM_001099405, intron 14 of 26)"	L1ME3C|LINE|L1	55001	NM_001099404	6331	Hs.517898	NM_000335	ENSG00000183873	SCN5A	CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1	sodium voltage-gated channel alpha subunit 5	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr3-1455	chr3	39175917	39177620	+	26.2	1703	"intron (NM_145755, intron 22 of 28)"	"intron (NM_145755, intron 22 of 28)"	-2929	NR_106880	102466743		NR_106880	ENSG00000168026	MIR6822	hsa-mir-6822	microRNA 6822	ncRNA	26.24	4.85	5.410309278	4.26E-09
chr3-1458	chr3	39495213	39496213	+	16	1000	Intergenic	AluSx|SINE|Alu	-13351	NM_001278322	4336	Hs.121333	NM_182935	ENSG00000168314	MOBP	-	myelin-associated oligodendrocyte basic protein	protein-coding	16	1.94	8.24742268	7.67E-08
chr3-1460	chr3	39554816	39555816	+	16	1000	"non-coding (NR_103506, exon 3 of 3)"	"non-coding (NR_103506, exon 3 of 3)"	11759	NM_001278323	4336	Hs.121333	NM_182935	ENSG00000168314	MOBP	-	myelin-associated oligodendrocyte basic protein	protein-coding	16	3.4	4.705882353	2.25E-05
chr3-1469	chr3	42800084	42801084	+	14.1	1000	"intron (NM_144719, intron 1 of 15)"	AluJr|SINE|Alu	-11520	NR_122070	729083	Hs.713395	NR_122070	ENSG00000225611	LINC02158	-	long intergenic non-protein coding RNA 2158	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr3-1471	chr3	43314279	43315620	+	19.2	1341	Intergenic	Intergenic	-13055	NM_017719	54861	Hs.476052	NM_017719	ENSG00000163788	SNRK	HSNFRK	SNF related kinase	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr3-1472	chr3	43895555	43897101	+	24.3	1546	Intergenic	Intergenic	-163242	NM_001346469	55129	Hs.656657	NM_018075	ENSG00000160746	ANO10	SCAR10|TMEM16K	anoctamin 10	protein-coding	24.32	2.91	8.357388316	5.77E-12
chr3-1473	chr3	44079851	44080851	+	16	1000	Intergenic	AluJb|SINE|Alu	-75353	NR_029700	406929		NR_029700	ENSG00000207954	MIR138-1	MIRN138-1|mir-138-1	microRNA 138-1	ncRNA	16	1.94	8.24742268	7.67E-08
chr3-148	chr3	45161281	45162281	+	22.4	1000	"intron (NM_178181, intron 1 of 3)"	"intron (NM_178181, intron 1 of 3)"	26133	NM_022842	64866	Hs.476093	NM_022842	ENSG00000163814	CDCP1	CD318|SIMA135|TRASK	CUB domain containing protein 1	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr3-1480	chr3	44244925	44247442	+	43.5	2517	Intergenic	Intergenic	-37195	NM_001145030	375337	Hs.132125	NM_001145030	ENSG00000173769	TOPAZ1	C3orf77	testis and ovary specific PAZ domain containing 1	protein-coding	43.53	5.82	7.479381443	9.68E-19
chr3-1481	chr3	45089729	45092260	+	33.3	2531	Intergenic	MER90|LTR|ERV1	19372	NM_001308394	7123	Hs.476092	NM_003278	ENSG00000163815	CLEC3B	TN|TNA	C-type lectin domain family 3 member B	protein-coding	33.28	3.4	9.788235294	2.03E-17
chr3-1485	chr3	45134850	45135850	+	15.4	1000	"intron (NM_022842, intron 5 of 8)"	"intron (NM_022842, intron 5 of 8)"	52564	NM_022842	64866	Hs.476093	NM_022842	ENSG00000163814	CDCP1	CD318|SIMA135|TRASK	CUB domain containing protein 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-1491	chr3	45297772	45299643	+	30.7	1871	Intergenic	AluSg|SINE|Alu	-30893	NM_015444	25907	Hs.740403	NM_015444	ENSG00000249992	TMEM158	BBP|RIS1|p40BBP	transmembrane protein 158 (gene/pseudogene)	protein-coding	30.72	5.82	5.278350515	1.29E-10
chr3-1492	chr3	45302260	45303260	+	15.4	1000	Intergenic	Intergenic	-34946	NM_015444	25907	Hs.740403	NM_015444	ENSG00000249992	TMEM158	BBP|RIS1|p40BBP	transmembrane protein 158 (gene/pseudogene)	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-1494	chr3	46235013	46236013	+	15.4	1000	Intergenic	Intergenic	14319	NM_001295	1230	Hs.301921	NM_001295	ENSG00000163823	CCR1	CD191|CKR-1|CKR1|CMKBR1|HM145|MIP1aR|SCYAR1	C-C motif chemokine receptor 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr3-1496	chr3	46294428	46295428	+	14.7	1000	"intron (NM_178329, intron 1 of 1)"	"intron (NM_178329, intron 1 of 1)"	11056	NM_001164680	1232	Hs.506190	NM_001837	ENSG00000183625	CCR3	CC-CKR-3|CD193|CKR3|CMKBR3	C-C motif chemokine receptor 3	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr3-1498	chr3	46313451	46314451	+	16	1000	Intergenic	LTR78|LTR|ERV1	30079	NM_001164680	1232	Hs.506190	NM_001837	ENSG00000183625	CCR3	CC-CKR-3|CD193|CKR3|CMKBR3	C-C motif chemokine receptor 3	protein-coding	16	3.4	4.705882353	2.25E-05
chr3-1513	chr3	50721475	50722475	+	16	1000	"intron (NM_004947, intron 1 of 52)"	"intron (NM_004947, intron 1 of 52)"	9303	NM_004947	1795	Hs.476284	NM_004947	ENSG00000088538	DOCK3	MOCA|PBP	dedicator of cytokinesis 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr3-1520	chr3	53491662	53492662	+	15.4	1000	Intergenic	Intergenic	-36914	NM_001128840	776	Hs.476358	NM_000720	ENSG00000157388	CACNA1D	CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD	calcium voltage-gated channel subunit alpha1 D	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-1521	chr3	53524901	53527690	+	41	2789	Intergenic	L1MC2|LINE|L1	-2781	NM_001128840	776	Hs.476358	NM_000720	ENSG00000157388	CACNA1D	CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD	calcium voltage-gated channel subunit alpha1 D	protein-coding	40.97	4.85	8.44742268	3.22E-19
chr3-1522	chr3	53585145	53586145	+	14.7	1000	"intron (NM_001128840, intron 3 of 47)"	"intron (NM_001128840, intron 3 of 47)"	56569	NM_000720	776	Hs.476358	NM_000720	ENSG00000157388	CACNA1D	CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD	calcium voltage-gated channel subunit alpha1 D	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr3-1524	chr3	53789916	53790916	+	16	1000	"intron (NM_001128840, intron 29 of 47)"	"intron (NM_001128840, intron 29 of 47)"	90004	NM_018397	55349	Hs.126688	NM_018397	ENSG00000016391	CHDH	-	choline dehydrogenase	protein-coding	16	1.94	8.24742268	7.67E-08
chr3-1526	chr3	54794808	54796137	+	20.5	1329	"intron (NM_018398, intron 12 of 37)"	"intron (NM_018398, intron 12 of 37)"	-121588	NR_027122	790952	Hs.720658	NR_027122	ENSG00000265992	ESRG	HESRG	embryonic stem cell related (non-protein coding)	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr3-1527	chr3	56515137	56516137	+	14.7	1000	Intergenic	L1ME4a|LINE|L1	-13246	NR_132749	26059	Hs.476389	NM_015576	ENSG00000187672	ERC2	CAST|CAST1|ELKSL|SPBC110|Spc110	ELKS/RAB6-interacting/CAST family member 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr3-1528	chr3	57024889	57025889	+	16	1000	"intron (NM_001128615, intron 2 of 12)"	L2b|LINE|L2	51321	NR_046572	100874200	Hs.549631	NR_046572	ENSG00000240198	ARHGEF3-AS1	-	ARHGEF3 antisense RNA 1	ncRNA	16	2.91	5.498281787	4.98E-06
chr3-1530	chr3	57194694	57195694	+	16	1000	"intron (NM_001318864, intron 2 of 13)"	"intron (NM_001318864, intron 2 of 13)"	4233	NM_017563	54756	Hs.150725	NM_017563	ENSG00000144730	IL17RD	HH18|IL-17RD|IL17RLM|SEF	interleukin 17 receptor D	protein-coding	16	2.91	5.498281787	4.98E-06
chr3-1532	chr3	58892441	58893441	+	15.4	1000	"intron (NM_198463, intron 6 of 15)"	Charlie18a|DNA|hAT-Charlie	82744	NR_110820	101929238	Hs.683953	NR_110820	ENSG00000242428	C3orf67-AS1	-	C3orf67 antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr3-1533	chr3	59441868	59442868	+	16	1000	Intergenic	Intergenic	-406653	NM_198463	200844	Hs.368434	NM_198463	ENSG00000163689	C3orf67	-	chromosome 3 open reading frame 67	protein-coding	16	1.46	10.95890411	3.44E-09
chr3-1537	chr3	63426792	63427792	+	15.4	1000	"intron (NR_046677, intron 2 of 4)"	"intron (NR_046677, intron 2 of 4)"	-1461	NM_144642	132204	Hs.648668	NM_144642	ENSG00000163630	SYNPR	SPO	synaptoporin	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr3-154	chr3	112930025	112931558	+	32	1533	promoter-TSS (NM_001301861)	promoter-TSS (NM_001301861)	479	NM_033254	91653	Hs.591318	NM_033254	ENSG00000144857	BOC	CDON2	"BOC cell adhesion associated, oncogene regulated"	protein-coding	32	2.43	13.16872428	9.19E-20
chr3-1541	chr3	66151936	66152936	+	16	1000	"intron (NM_173471, intron 1 of 10)"	MLT1K|LTR|ERVL-MaLR	33151	NM_173471	115286	Hs.379386	NM_173471	ENSG00000144741	SLC25A26	COXPD28|SAMC	solute carrier family 25 member 26	protein-coding	16	2.91	5.498281787	4.98E-06
chr3-1542	chr3	66542481	66543837	+	17.9	1356	"intron (NM_015541, intron 1 of 18)"	"intron (NM_015541, intron 1 of 18)"	7686	NM_015541	26018	Hs.518055	NM_015541	ENSG00000144749	LRIG1	LIG-1|LIG1	leucine rich repeats and immunoglobulin like domains 1	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr3-1543	chr3	68974009	68975009	+	16	1000	"intron (NM_001005527, intron 1 of 5)"	"intron (NM_001005527, intron 1 of 5)"	7252	NM_001005527	151647	Hs.187873	NM_182522	ENSG00000163377	FAM19A4	TAFA-4|TAFA4	"family with sequence similarity 19 member A4, C-C motif chemokine like"	protein-coding	16	1.94	8.24742268	7.67E-08
chr3-1545	chr3	70131611	70132611	+	15.4	1000	Intergenic	MIR|SINE|MIR	83216	NR_110000	101927152	Hs.382046	NR_110000	ENSG00000240405	SAMMSON	LINC01212	survival associated mitochondrial melanoma specific oncogenic non-coding RNA	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr3-1546	chr3	70247736	70248736	+	15.4	1000	Intergenic	Intergenic	199341	NR_110000	101927152	Hs.382046	NR_110000	ENSG00000240405	SAMMSON	LINC01212	survival associated mitochondrial melanoma specific oncogenic non-coding RNA	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr3-1549	chr3	71833562	71834892	+	23	1330	"5' UTR (NM_021935, exon 1 of 3)"	"5' UTR (NM_021935, exon 1 of 3)"	130	NM_001126128	60675	Hs.528665	NM_021935	ENSG00000163421	PROK2	BV8|HH4|KAL4|MIT1|PK2	prokineticin 2	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr3-1553	chr3	72643148	72644148	+	14.1	1000	Intergenic	Intergenic	69752	NR_135531	105377162	Hs.123457	NR_135531		LOC105377162	-	uncharacterized LOC105377162	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr3-1559	chr3	99402588	99403588	+	14.7	1000	"intron (NM_001850, intron 2 of 4)"	MIRb|SINE|MIR	45648	NM_001850	1295	Hs.654548	NM_001850	ENSG00000144810	COL8A1	C3orf7	collagen type VIII alpha 1 chain	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr3-156	chr3	123156402	123157659	+	22.4	1257	"intron (NM_183357, intron 1 of 20)"	MER103C|DNA|hAT-Charlie	10362	NM_183357	111	Hs.593292	NM_183357	ENSG00000173175	ADCY5	AC5|FDFM	adenylate cyclase 5	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr3-1561	chr3	100209039	100211544	+	39	2505	Intergenic	Intergenic	-1172	NM_018004	55076	Hs.658956	NM_018004	ENSG00000181458	TMEM45A	DERP7|DNAPTP4	transmembrane protein 45A	protein-coding	39.04	6.8	5.741176471	1.26E-13
chr3-1564	chr3	118687250	118688250	+	16	1000	"intron (NM_152538, intron 3 of 8)"	"intron (NM_152538, intron 3 of 8)"	25827	NR_046230	100506765	Hs.660823	NR_046230	ENSG00000239877	IGSF11-AS1	-	IGSF11 antisense RNA 1	ncRNA	16	1.94	8.24742268	7.67E-08
chr3-1568	chr3	122738966	122747290	+	126.7	8324	"intron (NR_046079, intron 1 of 22)"	"intron (NR_046079, intron 1 of 22)"	3531	NM_001256348	54437	Hs.210870	NM_018987	ENSG00000082684	SEMA5B	SEMAG|SemG	semaphorin 5B	protein-coding	126.74	16.99	7.459682166	3.12E-51
chr3-1569	chr3	123033395	123034395	+	15.4	1000	"intron (NM_183357, intron 11 of 20)"	"intron (NM_183357, intron 11 of 20)"	101294	NM_001199642	111	Hs.593292	NM_183357	ENSG00000173175	ADCY5	AC5|FDFM	adenylate cyclase 5	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-1576	chr3	123441176	123442176	+	16	1000	"intron (NM_053027, intron 12 of 32)"	"intron (NM_053027, intron 12 of 32)"	33185	NR_046629	100873940	Hs.667316	NR_046629	ENSG00000250174	MYLK-AS2	-	MYLK antisense RNA 2	ncRNA	16	2.91	5.498281787	4.98E-06
chr3-1577	chr3	123457807	123458807	+	15.4	1000	"intron (NM_053027, intron 6 of 32)"	MLT1J2|LTR|ERVL-MaLR	49816	NR_046629	100873940	Hs.667316	NR_046629	ENSG00000250174	MYLK-AS2	-	MYLK antisense RNA 2	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr3-1580	chr3	123794424	123795723	+	22.4	1299	Intergenic	Intergenic	-18455	NR_028136	8997	Hs.8004	NM_003947	ENSG00000160145	KALRN	ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD	"kalirin, RhoGEF kinase"	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr3-1581	chr3	123882467	123883467	+	15.4	1000	"non-coding (NR_028136, exon 3 of 3)"	"non-coding (NR_028136, exon 3 of 3)"	31191	NR_049798	100847021		NR_049798	ENSG00000266383	MIR5002	-	microRNA 5002	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr3-1583	chr3	124144844	124145844	+	16	1000	"intron (NM_001024660, intron 15 of 59)"	"intron (NM_001024660, intron 15 of 59)"	52165	NR_106731	102464832		NR_106731	ENSG00000276656	MIR6083	hsa-mir-6083	microRNA 6083	ncRNA	16	2.43	6.58436214	7.90E-07
chr3-1588	chr3	124572475	124573742	+	21.1	1267	"intron (NM_002213, intron 3 of 14)"	L1MB7|LINE|L1	33044	NM_002213	3693	Hs.13155	NM_002213	ENSG00000082781	ITGB5	-	integrin subunit beta 5	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr3-1591	chr3	124813610	124814610	+	16	1000	"intron (NM_024628, intron 10 of 13)"	L2a|LINE|L2	-39308	NM_020733	57493	Hs.477420	NM_020733	ENSG00000173706	HEG1	HEG|MST112|MSTP112	heart development protein with EGF like domains 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr3-1592	chr3	125394272	125395272	+	15.4	1000	Intergenic	Intergenic	-80391	NM_022776	114885	Hs.477440	NM_022776	ENSG00000144909	OSBPL11	ORP-11|ORP11|OSBP12|TCCCIA00292	oxysterol binding protein like 11	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr3-1593	chr3	125818904	125819904	+	14.7	1000	"intron (NM_001164475, intron 1 of 9)"	L4|LINE|RTE	987	NM_001164475	54946	Hs.573007	NM_017836	ENSG00000114544	SLC41A3	SLC41A1-L2	solute carrier family 41 member 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr3-1595	chr3	125991115	125992115	+	14.7	1000	Intergenic	MER113A|DNA|hAT-Charlie	84621	NM_014079	28999	Hs.272215	NM_014079	ENSG00000163884	KLF15	KKLF	Kruppel like factor 15	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr3-1596	chr3	126125339	126126339	+	16	1000	"intron (NM_182628, intron 2 of 16)"	MIRb|SINE|MIR	12057	NM_182628	348807	Hs.591305	NM_182628	ENSG00000163885	CFAP100	CCDC37|MIA1	cilia and flagella associated protein 100	protein-coding	16	0.97	16.49484536	3.54E-11
chr3-1600	chr3	126289690	126291354	+	28.2	1664	TTS (NM_001039783)	TTS (NM_001039783)	-12714	NR_130715	152065	Hs.178210	NM_152533	ENSG00000180697	C3orf22	-	chromosome 3 open reading frame 22	protein-coding	28.16	5.34	5.27340824	7.39E-10
chr3-1602	chr3	126815213	126816213	+	16	1000	Intergenic	Intergenic	-96261	NM_001007534	285311	Hs.591284	NM_001007534		C3orf56	-	chromosome 3 open reading frame 56	protein-coding	16	2.43	6.58436214	7.90E-07
chr3-1603	chr3	126818989	126821570	+	35.2	2581	Intergenic	Intergenic	-91695	NM_001007534	285311	Hs.591284	NM_001007534		C3orf56	-	chromosome 3 open reading frame 56	protein-coding	35.2	6.8	5.176470588	2.10E-11
chr3-1607	chr3	127195482	127196482	+	16	1000	Intergenic	Intergenic	60641	NR_125397	101927149	Hs.407798	NR_125397	ENSG00000239921	LINC01471	-	long intergenic non-protein coding RNA 1471	ncRNA	16	3.88	4.12371134	7.91E-05
chr3-1608	chr3	127351072	127352072	+	14.7	1000	"intron (NM_015720, intron 1 of 7)"	L2a|LINE|L2	3570	NM_015720	50512	Hs.591290	NM_015720	ENSG00000114631	PODXL2	EG|PODLX2	podocalyxin like 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr3-1611	chr3	127431028	127432028	+	16	1000	"intron (NM_001003794, intron 5 of 7)"	"intron (NM_001003794, intron 5 of 7)"	39747	NR_033429	80325	Hs.107812	NM_032548	ENSG00000114626	ABTB1	BPOZ|BTB3|BTBD21|EF1ABP|PP2259	ankyrin repeat and BTB domain containing 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr3-1614	chr3	128199516	128213407	+	272.7	13891	"intron (NM_032638, intron 1 of 5)"	CpG-18893	303	NM_001145662	2624	Hs.367725	NM_032638	ENSG00000179348	GATA2	DCML|IMD21|MONOMAC|NFE1B	GATA binding protein 2	protein-coding	272.67	35.92	7.591035635	2.03E-109
chr3-1617	chr3	128774960	128775960	+	15.4	1000	Intergenic	Intergenic	-4150	NM_000174	2815	Hs.1144	NM_000174	ENSG00000169704	GP9	CD42a|GPIX	glycoprotein IX platelet	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-1618	chr3	129689217	129690217	+	14.7	1000	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-3519	NM_007117	7200	Hs.182231	NM_007117	ENSG00000170893	TRH	Pro-TRH|TRF	thyrotropin releasing hormone	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr3-1621	chr3	130003863	130004863	+	14.1	1000	Intergenic	L2a|LINE|L2	-59996	NM_001278298	256076	Hs.205403	NM_153264	ENSG00000172752	COL6A5	COL29A1|VWA4	collagen type VI alpha 5 chain	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr3-1626	chr3	133236518	133237518	+	15.4	1000	Intergenic	L1ME4a|LINE|L1	-27028	NR_135277	85003	Hs.659202	NR_135276	ENSG00000249993	BFSP2-AS1	-	BFSP2 antisense RNA 1	ncRNA	15.36	0.49	31.34693878	1.26E-14
chr3-1627	chr3	134066467	134067467	+	15.4	1000	Intergenic	L1MC3|LINE|L1	19737	NR_106885	102466744		NR_106885	ENSG00000277723	MIR6827	hsa-mir-6827	microRNA 6827	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr3-163	chr3	137831360	137836984	+	113.3	5624	"5' UTR (NM_173543, exon 1 of 16)"	"5' UTR (NM_173543, exon 1 of 16)"	279	NM_173543	199221	Hs.351403	NM_173543	ENSG00000158163	DZIP1L	DZIP2	DAZ interacting zinc finger protein 1 like	protein-coding	113.29	22.33	5.073443798	3.24E-33
chr3-1630	chr3	134486684	134487684	+	14.1	1000	Intergenic	Intergenic	-26915	NM_004441	2047	Hs.116092	NM_004441	ENSG00000154928	EPHB1	ELK|EPHT2|Hek6|NET	EPH receptor B1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr3-1632	chr3	134733011	134734011	+	15.4	1000	"intron (NM_004441, intron 3 of 15)"	"intron (NM_004441, intron 3 of 15)"	219412	NM_004441	2047	Hs.116092	NM_004441	ENSG00000154928	EPHB1	ELK|EPHT2|Hek6|NET	EPH receptor B1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr3-1633	chr3	135216422	135217422	+	15.4	1000	Intergenic	Intergenic	-467593	NM_001190447	5523	Hs.518155	NM_002718	ENSG00000073711	PPP2R3A	PPP2R3|PR130|PR72	protein phosphatase 2 regulatory subunit B''alpha	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-1634	chr3	135475797	135477096	+	17.3	1299	Intergenic	L2a|LINE|L2	-208069	NM_001190447	5523	Hs.518155	NM_002718	ENSG00000073711	PPP2R3A	PPP2R3|PR130|PR72	protein phosphatase 2 regulatory subunit B''alpha	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr3-1643	chr3	138959733	138960733	+	15.4	1000	Intergenic	L1ME5|LINE|L1	-7869	NR_027070	140464	Hs.721270	NR_027070		PISRT1	NCRNA00195	polled intersex syndrome regulated transcript 1 (non-protein coding RNA)	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr3-1645	chr3	139446280	139447280	+	15.4	1000	Intergenic	Intergenic	-49888	NM_178177	349565	Hs.208673	NM_178177	ENSG00000163864	NMNAT3	FKSG76|PNAT-3|PNAT3	nicotinamide nucleotide adenylyltransferase 3	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr3-1654	chr3	140898277	140899752	+	21.1	1475	Intergenic	MER57D|LTR|ERV1	-51653	NM_152282	92370	Hs.657887	NM_152282	ENSG00000155893	PXYLP1	ACPL2|HEL124|XYLP	2-phosphoxylose phosphatase 1	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr3-1656	chr3	141120010	141123809	+	59.5	3799	"intron (NM_001080412, intron 6 of 7)"	"intron (NM_001080412, intron 6 of 7)"	78854	NM_001080412	253461	Hs.518301	NM_152535	ENSG00000177311	ZBTB38	CIBZ|PPP1R171|ZNF921	zinc finger and BTB domain containing 38	protein-coding	59.53	9.22	6.456616052	4.48E-22
chr3-166	chr3	140769558	140772456	+	67.2	2898	"intron (NM_080862, intron 1 of 2)"	CpG	763	NM_080862	92369	Hs.655112	NM_080862	ENSG00000175093	SPSB4	SSB-4|SSB4	splA/ryanodine receptor domain and SOCS box containing 4	protein-coding	67.21	9.22	7.289587852	4.19E-27
chr3-1664	chr3	147085628	147088094	+	36.5	2466	Intergenic	Intergenic	23356	NR_033119	84107	Hs.415766	NM_032153	ENSG00000174963	ZIC4	-	Zic family member 4	protein-coding	36.48	4.85	7.521649485	1.37E-15
chr3-1665	chr3	147121896	147122896	+	14.1	1000	promoter-TSS (NM_001168378)	promoter-TSS (NM_001168378)	-325	NM_001168378	84107	Hs.415766	NM_032153	ENSG00000174963	ZIC4	-	Zic family member 4	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr3-1672	chr3	161057955	161058955	+	14.7	1000	Intergenic	L1PA17|LINE|L1	31416	NM_001040100	165679	Hs.369104	NM_145035	ENSG00000196542	SPTSSB	ADMP|C3orf57|SSSPTB	serine palmitoyltransferase small subunit B	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr3-1677	chr3	169389826	169390826	+	15.4	1000	Intergenic	Intergenic	-8763	NM_004991	2122	Hs.744090	NM_004991	ENSG00000085276	MECOM	AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2	MDS1 and EVI1 complex locus	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-1678	chr3	170140922	170141922	+	14.7	1000	TTS (NR_106886)	TTS (NR_106886)	531	NR_106886	102465497		NR_106886	ENSG00000283474	MIR6828	hsa-mir-6828	microRNA 6828	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr3-1680	chr3	170745832	170746832	+	16	1000	Intergenic	Intergenic	-1564	NM_000340	6514	Hs.167584	NM_000340	ENSG00000163581	SLC2A2	GLUT2	solute carrier family 2 member 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr3-1684	chr3	181436042	181438481	+	35.2	2439	"intron (NR_004053, intron 4 of 4)"	CpG	7549	NM_003106	6657	Hs.518438	NM_003106	ENSG00000181449	SOX2	ANOP3|MCOPS3	SRY-box 2	protein-coding	35.2	5.82	6.048109966	6.75E-13
chr3-1686	chr3	182263312	182264312	+	14.7	1000	Intergenic	Intergenic	-38900	NR_134941	105374244	Hs.130176	NR_134941	ENSG00000244247	LINC01995	-	long intergenic non-protein coding RNA 1995	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr3-1688	chr3	182970702	182973296	+	60.2	2594	"intron (NM_032047, intron 1 of 1)"	CpG	967	NM_032047	84002	Hs.718506	NM_032047	ENSG00000176597	B3GNT5	B3GN-T5|beta3Gn-T5	"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5"	protein-coding	60.17	4.85	12.40618557	1.52E-34
chr3-1692	chr3	184011874	184012874	+	14.7	1000	Intergenic	AluSg|SINE|Alu	-4512	NM_002808	5708	Hs.518464	NM_002808	ENSG00000175166	PSMD2	P97|RPN1|S2|TRAP2	"proteasome 26S subunit, non-ATPase 2"	protein-coding	14.72	0	15.16333034	3.99E-13
chr3-1694	chr3	184112107	184113107	+	14.7	1000	Intergenic	Intergenic	-6718	NM_001322103	105374250	Hs.129464	NM_001322103		LINC02054	-	long intergenic non-protein coding RNA 2054	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr3-1695	chr3	184223997	184224997	+	15.4	1000	Intergenic	Intergenic	50209	NR_046593	100874079	Hs.574899	NR_046593	ENSG00000230215	LINC01840	EIF2B5-AS1	long intergenic non-protein coding RNA 1840	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr3-1698	chr3	184347768	184349103	+	21.1	1335	Intergenic	MIRb|SINE|MIR	68848	NM_004443	2049	Hs.2913	NM_004443	ENSG00000182580	EPHB3	EK2|ETK2|HEK2|TYRO6	EPH receptor B3	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr3-1699	chr3	184380198	184382202	+	30.7	2004	Intergenic	Intergenic	48636	NM_022149	64110	Hs.306123	NM_022149	ENSG00000177383	MAGEF1	-	MAGE family member F1	protein-coding	30.72	3.88	7.917525773	3.25E-14
chr3-1701	chr3	185046218	185047218	+	16	1000	"intron (NM_001242317, intron 2 of 12)"	"intron (NM_001242317, intron 2 of 12)"	-34118	NM_004721	9175	Hs.591306	NM_004721	ENSG00000073803	MAP3K13	LZK|MEKK13|MLK	mitogen-activated protein kinase kinase kinase 13	protein-coding	16	3.88	4.12371134	7.91E-05
chr3-1702	chr3	185053431	185054431	+	14.7	1000	"intron (NM_001242317, intron 2 of 12)"	"intron (NM_001242317, intron 2 of 12)"	-26905	NM_004721	9175	Hs.591306	NM_004721	ENSG00000073803	MAP3K13	LZK|MEKK13|MLK	mitogen-activated protein kinase kinase kinase 13	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr3-1710	chr3	186208599	186209599	+	14.7	1000	"intron (NR_033844, intron 2 of 7)"	L1M5|LINE|L1	2351	NR_033844	253573	Hs.97386	NR_033844	ENSG00000224406	LINC02052	-	long intergenic non-protein coding RNA 2052	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr3-1719	chr3	189047966	189048966	+	15.4	1000	Intergenic	MIR|SINE|MIR	-90083	NR_046722	100874027	Hs.616080	NR_046722	ENSG00000230115	TPRG1-AS2	-	TPRG1 antisense RNA 2	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr3-1720	chr3	192185042	192186042	+	16	1000	"intron (NM_004113, intron 2 of 5)"	MIRc|SINE|MIR	-47269	NR_046598	100873988	Hs.628012	NR_046598		FGF12-AS3	-	FGF12 antisense RNA 3	ncRNA	16	2.91	5.498281787	4.98E-06
chr3-1721	chr3	192517523	192518523	+	15.4	1000	"intron (NM_178496, intron 1 of 1)"	Charlie1a|DNA|hAT-Charlie	-72635	NM_004113	2257	Hs.390250	NM_004113	ENSG00000114279	FGF12	EIEE47|FGF12B|FHF1	fibroblast growth factor 12	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-1724	chr3	193832572	193833572	+	15.4	1000	Intergenic	Intergenic	-20859	NM_005524	3280	Hs.250666	NM_005524	ENSG00000114315	HES1	HES-1|HHL|HRY|bHLHb39	hes family bHLH transcription factor 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-1726	chr3	194529891	194530891	+	15.4	1000	Intergenic	Intergenic	101241	NR_037891	100507391	Hs.590099	NR_037891	ENSG00000237222	LINC01968	-	long intergenic non-protein coding RNA 1968	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr3-1729	chr3	194670564	194671564	+	15.4	1000	Intergenic	MLT1B|LTR|ERVL-MaLR	-144253	NR_104188	100874528	Hs.581659	NR_104188	ENSG00000233303	XXYLT1-AS1	-	XXYLT1 antisense RNA 1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr3-1730	chr3	194702175	194703175	+	15.4	1000	Intergenic	MSTD|LTR|ERVL-MaLR	-112642	NR_104188	100874528	Hs.581659	NR_104188	ENSG00000233303	XXYLT1-AS1	-	XXYLT1 antisense RNA 1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr3-1733	chr3	195462794	195463794	+	14.1	1000	Intergenic	L1M5|LINE|L1	15541	NM_020790	200958	Hs.308992	NM_020790	ENSG00000176945	MUC20	MUC-20	"mucin 20, cell surface associated"	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr3-1737	chr3	4319252	4320252	+	13.4	1000	Intergenic	Charlie10|DNA|hAT-Charlie	-25236	NM_001320678	6419	Hs.475300	NM_006515	ENSG00000170364	SETMAR	METNASE|Mar1	SET domain and mariner transposase fusion gene	protein-coding	13.44	2.43	5.530864198	2.99E-05
chr3-1739	chr3	5059105	5060105	+	14.1	1000	Intergenic	Intergenic	-37959	NR_037903	100507582	Hs.434505	NR_037903	ENSG00000235831	BHLHE40-AS1	-	BHLHE40 antisense RNA 1	ncRNA	14.08	1.46	9.643835616	3.66E-08
chr3-174	chr3	184286699	184288636	+	37.1	1937	"intron (NM_004443, intron 1 of 15)"	"intron (NM_004443, intron 1 of 15)"	8080	NM_004443	2049	Hs.2913	NM_004443	ENSG00000182580	EPHB3	EK2|ETK2|HEK2|TYRO6	EPH receptor B3	protein-coding	37.12	3.88	9.567010309	5.72E-19
chr3-1741	chr3	5344726	5345991	+	20.5	1265	Intergenic	Intergenic	-53418	NR_039953	100616334		NR_039953	ENSG00000265180	MIR4790	-	microRNA 4790	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr3-1744	chr3	9061186	9062186	+	14.7	1000	"intron (NM_001033117, intron 14 of 21)"	MIRc|SINE|MIR	-56527	NM_020165	56852	Hs.375684	NM_020165	ENSG00000070950	RAD18	RNF73	"RAD18, E3 ubiquitin protein ligase"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr3-1748	chr3	9246403	9247675	+	17.3	1272	"intron (NM_001033117, intron 1 of 21)"	MER33|DNA|hAT-Charlie	-11540	NR_103443	100288831	Hs.694646	NR_103443	ENSG00000227929	SRGAP3-AS3	-	SRGAP3 antisense RNA 3	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr3-1751	chr3	10455612	10456612	+	14.1	1000	"intron (NM_001330611, intron 2 of 21)"	MER102c|DNA|hAT-Charlie	-19866	NR_030614	100126334		NR_030614	ENSG00000216135	MIR885	MIRN885|hsa-mir-885|mir-885	microRNA 885	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr3-1754	chr3	10600437	10601715	+	23	1278	Intergenic	L1MA5|LINE|L1	-53702	NM_001330611	491	Hs.268942	NM_001683	ENSG00000157087	ATP2B2	PMCA2|PMCA2a|PMCA2i	ATPase plasma membrane Ca2+ transporting 2	protein-coding	23.04	4.37	5.272311213	2.46E-08
chr3-1755	chr3	10618399	10619951	+	22.4	1552	Intergenic	Intergenic	49317	NR_046766	100874325	Hs.143004	NR_046766	ENSG00000224771	ATP2B2-IT2	-	ATP2B2 intronic transcript 2	ncRNA	22.4	4.85	4.618556701	5.54E-07
chr3-1757	chr3	10628037	10629037	+	14.7	1000	Intergenic	Intergenic	39955	NR_046766	100874325	Hs.143004	NR_046766	ENSG00000224771	ATP2B2-IT2	-	ATP2B2 intronic transcript 2	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr3-1759	chr3	10653194	10654194	+	14.7	1000	Intergenic	Intergenic	14798	NR_046766	100874325	Hs.143004	NR_046766	ENSG00000224771	ATP2B2-IT2	-	ATP2B2 intronic transcript 2	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr3-176	chr3	10533313	10534581	+	23	1268	"intron (NM_001330611, intron 1 of 21)"	"intron (NM_001330611, intron 1 of 21)"	13321	NM_001001331	491	Hs.268942	NM_001683	ENSG00000157087	ATP2B2	PMCA2|PMCA2a|PMCA2i	ATPase plasma membrane Ca2+ transporting 2	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr3-1760	chr3	10705025	10706025	+	14.1	1000	Intergenic	L2c|LINE|L2	-37033	NR_046766	100874325	Hs.143004	NR_046766	ENSG00000224771	ATP2B2-IT2	-	ATP2B2 intronic transcript 2	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr3-1762	chr3	11094316	11097131	+	37.1	2815	Intergenic	L1ME4a|LINE|L1	-34813	NR_046647	100874090	Hs.628542	NR_046647	ENSG00000232287	SLC6A1-AS1	-	SLC6A1 antisense RNA 1	ncRNA	37.12	8.25	4.499393939	6.71E-11
chr3-1767	chr3	11296019	11297599	+	21.1	1580	"intron (NM_000861, intron 2 of 2)"	LTR10B1|LTR|ERV1	2424	NM_000861	3269	Hs.1570	NM_000861	ENSG00000196639	HRH1	H1-R|H1R|HH1R|hisH1	histamine receptor H1	protein-coding	21.12	2.43	8.691358025	2.25E-10
chr3-1769	chr3	11760833	11762395	+	27.5	1562	"intron (NM_001284390, intron 1 of 6)"	CpG	628	NM_001284390	9686	Hs.740389	NM_014667	ENSG00000144560	VGLL4	VGL-4	vestigial like family member 4	protein-coding	27.52	3.4	8.094117647	1.25E-12
chr3-1771	chr3	11951202	11952524	+	21.8	1322	Intergenic	Intergenic	-63470	NM_001284401	132001	Hs.475472	NM_138807	ENSG00000144559	TAMM41	C3orf31|RAM41|TAM41	TAM41 mitochondrial translocator assembly and maintenance homolog	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr3-1776	chr3	12271956	12272956	+	14.7	1000	Intergenic	MIR|SINE|MIR	-56893	NM_138712	5468	Hs.162646	NM_005037	ENSG00000132170	PPARG	CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma	peroxisome proliferator activated receptor gamma	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr3-1777	chr3	12357907	12358907	+	14.7	1000	"intron (NM_138712, intron 2 of 7)"	"intron (NM_138712, intron 2 of 7)"	4528	NM_001330615	5468	Hs.162646	NM_005037	ENSG00000132170	PPARG	CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma	peroxisome proliferator activated receptor gamma	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr3-1778	chr3	12486833	12488581	+	26.2	1748	Intergenic	LTR16C|LTR|ERVL	-38224	NM_001321278	80746	Hs.335550	NM_025265	ENSG00000154743	TSEN2	PCH2B|SEN2|SEN2L	tRNA splicing endonuclease subunit 2	protein-coding	26.24	3.88	6.762886598	1.00E-10
chr3-1779	chr3	12741483	12742483	+	14.7	1000	Intergenic	Intergenic	-36283	NM_002880	5894	Hs.159130	NM_002880	ENSG00000132155	RAF1	CMD1NN|CRAF|NS5|Raf-1|c-Raf	"Raf-1 proto-oncogene, serine/threonine kinase"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr3-1780	chr3	13141604	13142604	+	15.4	1000	Intergenic	Intergenic	-27487	NM_001134382	9922	Hs.475506	NM_014869	ENSG00000144711	IQSEC1	ARF-GEP100|ARFGEP100|BRAG2|GEP100	IQ motif and Sec7 domain 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-1782	chr3	13212059	13213688	+	24.3	1629	Intergenic	Intergenic	-98256	NM_001134382	9922	Hs.475506	NM_014869	ENSG00000144711	IQSEC1	ARF-GEP100|ARFGEP100|BRAG2|GEP100	IQ motif and Sec7 domain 1	protein-coding	24.32	3.4	7.152941176	7.55E-11
chr3-1785	chr3	13261916	13262916	+	15.4	1000	Intergenic	Intergenic	-147799	NM_001134382	9922	Hs.475506	NM_014869	ENSG00000144711	IQSEC1	ARF-GEP100|ARFGEP100|BRAG2|GEP100	IQ motif and Sec7 domain 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-1786	chr3	13295458	13296458	+	14.1	1000	Intergenic	Intergenic	165861	NM_024923	23225	Hs.475525	NM_024923	ENSG00000132182	NUP210	GP210|POM210	nucleoporin 210	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr3-1787	chr3	13298752	13299752	+	14.1	1000	Intergenic	L1MC1|LINE|L1	162567	NM_024923	23225	Hs.475525	NM_024923	ENSG00000132182	NUP210	GP210|POM210	nucleoporin 210	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr3-1796	chr3	14308411	14309411	+	14.1	1000	Intergenic	MIRc|SINE|MIR	85157	NR_110135	101927565	Hs.306905	NR_110135	ENSG00000251576	LINC01267	-	long intergenic non-protein coding RNA 1267	ncRNA	14.08	1.46	9.643835616	3.66E-08
chr3-18	chr3	127540711	127543499	+	53.8	2788	promoter-TSS (NM_001256585)	promoter-TSS (NM_001256585)	-12	NM_001003794	11343	Hs.277035	NM_007283	ENSG00000074416	MGLL	HU-K5|HUK5|MAGL|MGL	monoglyceride lipase	protein-coding	53.77	7.77	6.92020592	1.47E-21
chr3-1800	chr3	14572451	14574122	+	26.2	1671	"intron (NM_001080423, intron 1 of 24)"	"intron (NM_001080423, intron 1 of 24)"	8564	NM_001080423	80852	Hs.517819	NM_001080423	ENSG00000144596	GRIP2	-	glutamate receptor interacting protein 2	protein-coding	26.24	6.31	4.158478605	2.77E-07
chr3-1803	chr3	14849442	14852074	+	37.1	2632	"intron (NR_135245, intron 1 of 2)"	(CCA)n|Simple_repeat|Simple_repeat	2163	NR_135245	152274	Hs.434128	NR_135245	ENSG00000260902	LINC02011	-	long intergenic non-protein coding RNA 2011	ncRNA	37.12	6.8	5.458823529	7.17E-13
chr3-1813	chr3	15379082	15380520	+	21.8	1438	"intron (NM_001018009, intron 1 of 8)"	AluJr|SINE|Alu	3100	NM_001018009	9467	Hs.257761	NM_004844	ENSG00000131370	SH3BP5	SAB|SH3BP-5	SH3 domain binding protein 5	protein-coding	21.76	3.4	6.4	3.73E-09
chr3-1815	chr3	15396151	15397151	+	15.4	1000	Intergenic	Intergenic	-13750	NM_001018009	9467	Hs.257761	NM_004844	ENSG00000131370	SH3BP5	SAB|SH3BP-5	SH3 domain binding protein 5	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-1821	chr3	17819835	17820835	+	14.1	1000	Intergenic	HERV9-int|LTR|ERV1	35899	NR_135536	105376975	Hs.543238	NR_135536		LOC105376975	-	uncharacterized LOC105376975	ncRNA	14.08	0.49	28.73469388	3.99E-13
chr3-1827	chr3	31028241	31029241	+	14.7	1000	Intergenic	Intergenic	-92588	NM_207359	339896	Hs.657052	NM_207359	ENSG00000144644	GADL1	ADC|CSADC|HuADC|HuCSADC	glutamate decarboxylase like 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr3-1834	chr3	34184144	34185144	+	14.7	1000	Intergenic	MSTB1|LTR|ERVL-MaLR	344581	NM_001162429	10015	Hs.475896	NM_013374	ENSG00000170248	PDCD6IP	AIP1|ALIX|DRIP4|HP95	programmed cell death 6 interacting protein	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr3-1835	chr3	36420994	36421994	+	14.1	1000	promoter-TSS (NM_003149)	promoter-TSS (NM_003149)	-485	NM_001292049	6769	Hs.56045	NM_003149	ENSG00000144681	STAC	STAC1	SH3 and cysteine rich domain	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr3-1836	chr3	36870860	36871860	+	15.4	1000	"intron (NM_001329998, intron 22 of 23)"	"intron (NM_001329998, intron 22 of 23)"	-90008	NM_033403	85443	Hs.631907	NM_033403	ENSG00000163673	DCLK3	CLR|DCAMKL3|DCDC3C|DCK3	doublecortin like kinase 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-1839	chr3	37632664	37633664	+	14.1	1000	"intron (NM_002207, intron 15 of 27)"	"intron (NM_002207, intron 15 of 27)"	139351	NM_002207	3680	Hs.113157	NM_002207	ENSG00000144668	ITGA9	ALPHA-RLC|ITGA4L|RLC	integrin subunit alpha 9	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr3-1840	chr3	37667380	37668864	+	18.6	1484	"intron (NM_002207, intron 15 of 27)"	AluJr|SINE|Alu	174309	NM_002207	3680	Hs.113157	NM_002207	ENSG00000144668	ITGA9	ALPHA-RLC|ITGA4L|RLC	integrin subunit alpha 9	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr3-1843	chr3	38080631	38081631	+	14.1	1000	"intron (NM_001321153, intron 1 of 36)"	CpG	435	NM_007337	9940	Hs.714499	NM_007335	ENSG00000008226	DLEC1	CFAP81|DLC-1|DLC1|F56	deleted in lung and esophageal cancer 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr3-1851	chr3	39476574	39477574	+	15.4	1000	Intergenic	Intergenic	24529	NR_002324	6044	Hs.449909	NR_002324	ENSG00000202363	SNORA62	E2|E2-1|RNE2|RNU108	"small nucleolar RNA, H/ACA box 62"	snoRNA	15.36	1.94	7.917525773	7.67E-08
chr3-1856	chr3	39823080	39824361	+	17.9	1281	Intergenic	L2a|LINE|L2	-26685	NM_001284423	25924	Hs.594535	NM_015460	ENSG00000170011	MYRIP	SLAC2-C|SLAC2C	myosin VIIA and Rab interacting protein	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr3-1861	chr3	41213844	41216096	+	30.7	2252	Intergenic	MER113|DNA|hAT-Charlie	-25945	NM_001330729	1499	Hs.476018	NM_001904	ENSG00000168036	CTNNB1	CTNNB|MRD19|armadillo	catenin beta 1	protein-coding	30.72	7.28	4.21978022	9.24E-09
chr3-1865	chr3	42308970	42309970	+	14.7	1000	Intergenic	Intergenic	-1783	NM_000729	885	Hs.458426	NM_000729	ENSG00000187094	CCK	-	cholecystokinin	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr3-1866	chr3	42421115	42422466	+	21.1	1351	Intergenic	MIRc|SINE|MIR	30304	NM_144634	131375	Hs.234895	NM_144634	ENSG00000157093	LYZL4	LYC4|LYZA	lysozyme like 4	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr3-1869	chr3	42751411	42753190	+	27.5	1779	"intron (NM_144719, intron 14 of 15)"	"intron (NM_144719, intron 14 of 15)"	-7981	NM_020707	57467	Hs.476041	NM_020707	ENSG00000010282	HHATL	C3orf3|GUP1|MBOAT3|MSTP002|OACT3	hedgehog acyltransferase-like	protein-coding	27.52	2.91	9.457044674	7.03E-14
chr3-1871	chr3	43025963	43026963	+	14.7	1000	"intron (NM_001129908, intron 1 of 4)"	LTR36|LTR|ERV1	5704	NM_001129908	729085	Hs.729533	NM_001129908	ENSG00000144649	FAM198A	C3orf41	family with sequence similarity 198 member A	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr3-1875	chr3	43828187	43829187	+	15.4	1000	Intergenic	Intergenic	-95601	NM_001346469	55129	Hs.656657	NM_018075	ENSG00000160746	ANO10	SCAR10|TMEM16K	anoctamin 10	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-1877	chr3	44072096	44073096	+	14.7	1000	Intergenic	Intergenic	-83108	NR_029700	406929		NR_029700	ENSG00000207954	MIR138-1	MIRN138-1|mir-138-1	microRNA 138-1	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr3-1879	chr3	44104077	44105735	+	25	1658	Intergenic	Intergenic	-50798	NR_029700	406929		NR_029700	ENSG00000207954	MIR138-1	MIRN138-1|mir-138-1	microRNA 138-1	ncRNA	24.96	3.88	6.432989691	6.68E-10
chr3-188	chr3	48607916	48609733	+	38.4	1817	"intron (NM_000094, intron 91 of 117)"	"intron (NM_000094, intron 91 of 117)"	7586	NR_031756	100313843		NR_031756	ENSG00000114270	MIR711	hsa-mir-711	microRNA 711	ncRNA	38.4	6.8	5.647058824	1.26E-13
chr3-1891	chr3	45222441	45224158	+	26.2	1717	Intergenic	Intergenic	-35385	NM_178181	64866	Hs.476093	NM_022842	ENSG00000163814	CDCP1	CD318|SIMA135|TRASK	CUB domain containing protein 1	protein-coding	26.24	2.91	9.017182131	6.53E-13
chr3-1894	chr3	45258307	45260211	+	28.2	1904	Intergenic	Intergenic	8555	NM_015444	25907	Hs.740403	NM_015444	ENSG00000249992	TMEM158	BBP|RIS1|p40BBP	transmembrane protein 158 (gene/pseudogene)	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr3-1897	chr3	45281800	45282800	+	14.1	1000	Intergenic	Intergenic	-14486	NM_015444	25907	Hs.740403	NM_015444	ENSG00000249992	TMEM158	BBP|RIS1|p40BBP	transmembrane protein 158 (gene/pseudogene)	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr3-1902	chr3	46210891	46212384	+	22.4	1493	Intergenic	L1PREC2|LINE|L1	38195	NM_001295	1230	Hs.301921	NM_001295	ENSG00000163823	CCR1	CD191|CKR-1|CKR1|CMKBR1|HM145|MIP1aR|SCYAR1	C-C motif chemokine receptor 1	protein-coding	22.4	5.34	4.194756554	1.97E-06
chr3-1906	chr3	46376979	46377979	+	15.4	1000	Intergenic	HERVK22-int|LTR|ERVK	-17756	NM_001123041	729230	Hs.511794	NM_001123041	ENSG00000121807	CCR2	CC-CKR-2|CCR-2|CCR2A|CCR2B|CD192|CKR2|CKR2A|CKR2B|CMKBR2|MCP-1-R	C-C motif chemokine receptor 2	protein-coding	15.36	0	15.82260557	1.26E-14
chr3-1907	chr3	46397434	46398434	+	14.7	1000	"intron (NM_001123041, intron 1 of 2)"	L2c|LINE|L2	2699	NM_001123396	729230	Hs.511794	NM_001123041	ENSG00000121807	CCR2	CC-CKR-2|CCR-2|CCR2A|CCR2B|CD192|CKR2|CKR2A|CKR2B|CMKBR2|MCP-1-R	C-C motif chemokine receptor 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr3-1908	chr3	46405604	46406604	+	13.4	1000	TTS (NR_125406)	TTS (NR_125406)	-5529	NM_000579	1234	Hs.450802	NM_000579	ENSG00000160791	CCR5	CC-CKR-5|CCCKR5|CCR-5|CD195|CKR-5|CKR5|CMKBR5|IDDM22	C-C motif chemokine receptor 5 (gene/pseudogene)	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr3-1912	chr3	46706862	46707862	+	14.1	1000	Intergenic	Intergenic	27784	NM_001190707	259173	Hs.517937	NM_147129	ENSG00000178038	ALS2CL	RN49018	ALS2 C-terminal like	protein-coding	14.08	0	14.5040551	3.99E-13
chr3-1916	chr3	49212989	49213989	+	15.4	1000	"3' UTR (NM_173546, exon 6 of 6)"	"3' UTR (NM_173546, exon 6 of 6)"	4471	NM_173546	200942	Hs.13781	NM_173546	ENSG00000185909	KLHDC8B	CHL	kelch domain containing 8B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-1917	chr3	50199299	50200299	+	14.1	1000	"intron (NM_001318798, intron 2 of 17)"	"intron (NM_001318798, intron 2 of 17)"	3347	NM_001318800	6405	Hs.32981	NM_004186	ENSG00000001617	SEMA3F	SEMA-IV|SEMA4|SEMAK	semaphorin 3F	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr3-1918	chr3	50238785	50243730	+	73	4945	Intergenic	Intergenic	-1422	NM_006841	10991	Hs.76460	NM_006841	ENSG00000188338	SLC38A3	G17|NAT1|SN1|SNAT3	solute carrier family 38 member 3	protein-coding	72.97	10.68	6.832397004	2.23E-28
chr3-1921	chr3	50480729	50481729	+	14.7	1000	"intron (NM_001005505, intron 2 of 37)"	"intron (NM_001005505, intron 2 of 37)"	59799	NM_001174051	9254	Hs.476273	NM_006030	ENSG00000007402	CACNA2D2	CACNA2D	calcium voltage-gated channel auxiliary subunit alpha2delta 2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr3-1924	chr3	50538110	50542347	+	73.6	4237	"intron (NM_001291101, intron 1 of 37)"	CpG	800	NM_001174051	9254	Hs.476273	NM_006030	ENSG00000007402	CACNA2D2	CACNA2D	calcium voltage-gated channel auxiliary subunit alpha2delta 2	protein-coding	73.61	4.85	15.17731959	5.86E-46
chr3-1927	chr3	50565585	50569493	+	66.6	3908	Intergenic	Intergenic	-25864	NM_001291101	9254	Hs.476273	NM_006030	ENSG00000007402	CACNA2D2	CACNA2D	calcium voltage-gated channel auxiliary subunit alpha2delta 2	protein-coding	66.57	15.53	4.286542176	2.01E-17
chr3-1932	chr3	50600861	50603860	+	39	2999	"intron (NM_001171743, intron 2 of 4)"	"intron (NM_001171743, intron 2 of 4)"	2863	NM_016210	51161	Hs.517860	NM_016210	ENSG00000088543	C3orf18	G20	chromosome 3 open reading frame 18	protein-coding	39.04	7.77	5.024453024	3.34E-12
chr3-1938	chr3	51250276	51251276	+	15.4	1000	"intron (NM_004947, intron 13 of 52)"	"intron (NM_004947, intron 13 of 52)"	-171892	NM_006010	7873	Hs.436446	NM_006010	ENSG00000145050	MANF	ARMET|ARP	mesencephalic astrocyte derived neurotrophic factor	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-1939	chr3	51317408	51318408	+	14.7	1000	"intron (NM_004947, intron 27 of 52)"	"intron (NM_004947, intron 27 of 52)"	-104760	NM_006010	7873	Hs.436446	NM_006010	ENSG00000145050	MANF	ARMET|ARP	mesencephalic astrocyte derived neurotrophic factor	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr3-1940	chr3	51365588	51366588	+	15.4	1000	"intron (NM_004947, intron 32 of 52)"	"intron (NM_004947, intron 32 of 52)"	-56580	NM_006010	7873	Hs.436446	NM_006010	ENSG00000145050	MANF	ARMET|ARP	mesencephalic astrocyte derived neurotrophic factor	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr3-1941	chr3	51805498	51806498	+	15.4	1000	Intergenic	Intergenic	7205	NM_001143833	440956	Hs.444316	NM_001143833	ENSG00000214686	IQCF6	-	IQ motif containing F6	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr3-1944	chr3	52822103	52823103	+	15.4	1000	"intron (NM_001166436, intron 14 of 17)"	AluSx|SINE|Alu	-6181	NM_002217	3699	Hs.76716	NM_002217	ENSG00000162267	ITIH3	H3P|ITI-HC3|SHAP	inter-alpha-trypsin inhibitor heavy chain 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-1946	chr3	53188522	53192493	+	53.8	3971	Intergenic	Intergenic	-4716	NM_212539	5580	Hs.155342	NM_006254	ENSG00000163932	PRKCD	ALPS3|CVID9|MAY1|PKCD|nPKC-delta	protein kinase C delta	protein-coding	53.77	10.19	5.276741904	2.12E-17
chr3-1947	chr3	53464115	53465115	+	14.1	1000	Intergenic	Intergenic	-64461	NM_001128840	776	Hs.476358	NM_000720	ENSG00000157388	CACNA1D	CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD	calcium voltage-gated channel subunit alpha1 D	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr3-1949	chr3	53553169	53554169	+	15.4	1000	"intron (NM_001128840, intron 3 of 47)"	"intron (NM_001128840, intron 3 of 47)"	24593	NM_000720	776	Hs.476358	NM_000720	ENSG00000157388	CACNA1D	CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD	calcium voltage-gated channel subunit alpha1 D	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-1953	chr3	53762170	53763170	+	13.4	1000	"intron (NM_001128840, intron 15 of 47)"	"intron (NM_001128840, intron 15 of 47)"	117750	NM_018397	55349	Hs.126688	NM_018397	ENSG00000016391	CHDH	-	choline dehydrogenase	protein-coding	13.44	2.43	5.530864198	2.99E-05
chr3-1955	chr3	53808245	53810175	+	32.6	1930	"intron (NM_001128840, intron 34 of 47)"	Charlie2b|DNA|hAT-Charlie	71210	NM_018397	55349	Hs.126688	NM_018397	ENSG00000016391	CHDH	-	choline dehydrogenase	protein-coding	32.64	2.91	11.21649485	6.10E-18
chr3-1957	chr3	54031469	54032469	+	14.1	1000	Intergenic	Intergenic	-105927	NM_021237	58515	Hs.58471	NM_021237	ENSG00000113811	SELENOK	HSPC030|HSPC297|SELK	selenoprotein K	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr3-196	chr3	124403279	124404533	+	23	1254	"intron (NM_001024660, intron 51 of 59)"	"intron (NM_001024660, intron 51 of 59)"	-45307	NM_000373	7372	Hs.2057	NM_000373	ENSG00000114491	UMPS	OPRT	uridine monophosphate synthetase	protein-coding	23.04	0	23.73390835	2.80E-24
chr3-1961	chr3	56497187	56498187	+	15.4	1000	"intron (NM_015576, intron 1 of 16)"	"intron (NM_015576, intron 1 of 16)"	4704	NM_015576	26059	Hs.476389	NM_015576	ENSG00000187672	ERC2	CAST|CAST1|ELKSL|SPBC110|Spc110	ELKS/RAB6-interacting/CAST family member 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-1962	chr3	56573883	56574883	+	15.4	1000	Intergenic	MIR|SINE|MIR	-16801	NR_024460	285331	Hs.476399	NM_001012506	ENSG00000180376	CCDC66	-	coiled-coil domain containing 66	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-1967	chr3	57518518	57519518	+	14.7	1000	"intron (NM_198564, intron 2 of 11)"	L1M1|LINE|L1	11053	NM_001291661	201625	Hs.201378	NM_178504	ENSG00000174844	DNAH12	DHC3|DLP12|DLP3|DNAH12L|DNAH7L|DNAHC12|DNAHC3|DNHD2|HDHC3|HL-19|HL19	dynein axonemal heavy chain 12	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr3-1971	chr3	59715773	59716773	+	15.4	1000	Intergenic	Intergenic	350580	NM_001320901	2272	Hs.655995	NM_002012	ENSG00000189283	FHIT	AP3Aase|FRA3B	fragile histidine triad	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-1975	chr3	61705161	61706161	+	14.7	1000	"intron (NM_002841, intron 1 of 29)"	L2a|LINE|L2	158418	NM_002841	5793	Hs.595541	NM_002841	ENSG00000144724	PTPRG	HPTPG|PTPG|R-PTP-GAMMA|RPTPG	"protein tyrosine phosphatase, receptor type G"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr3-1977	chr3	64524782	64525782	+	14.1	1000	"intron (NM_182920, intron 36 of 39)"	"intron (NM_182920, intron 36 of 39)"	-21740	NR_110151	101929335	Hs.476604	NR_110150	ENSG00000241158	ADAMTS9-AS1	-	ADAMTS9 antisense RNA 1	ncRNA	14.08	0	14.5040551	3.99E-13
chr3-1978	chr3	64751085	64752085	+	14.1	1000	"intron (NR_038264, intron 1 of 5)"	"intron (NR_038264, intron 1 of 5)"	-78220	NM_182920	56999	Hs.656071	NM_182920	ENSG00000163638	ADAMTS9	-	ADAM metallopeptidase with thrombospondin type 1 motif 9	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr3-1979	chr3	65966352	65967352	+	15.4	1000	"intron (NM_015520, intron 1 of 24)"	AluSz|SINE|Alu	57657	NM_015520	9223	Hs.476636	NM_004742	ENSG00000151276	MAGI1	AIP-3|AIP3|BAIAP1|BAP-1|BAP1|MAGI-1|Magi1d|TNRC19|WWP3	"membrane associated guanylate kinase, WW and PDZ domain containing 1"	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr3-1982	chr3	66109968	66110968	+	15.4	1000	Intergenic	Kanga1c|DNA|TcMar-Tc2	-8817	NM_173471	115286	Hs.379386	NM_173471	ENSG00000144741	SLC25A26	COXPD28|SAMC	solute carrier family 25 member 26	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr3-1985	chr3	66515355	66516355	+	15.4	1000	"intron (NM_015541, intron 1 of 18)"	AluSx1|SINE|Alu	34990	NM_015541	26018	Hs.518055	NM_015541	ENSG00000144749	LRIG1	LIG-1|LIG1	leucine rich repeats and immunoglobulin like domains 1	protein-coding	15.36	0	15.82260557	1.26E-14
chr3-1988	chr3	70782121	70783121	+	12.8	1000	Intergenic	Intergenic	331453	NM_001244813	27086	Hs.59368	NM_032682	ENSG00000114861	FOXP1	12CC4|HSPC215|MFH|QRF1|hFKH1B	forkhead box P1	protein-coding	12.8	0.97	13.19587629	8.12E-09
chr3-1989	chr3	71667222	71668222	+	14.1	1000	Intergenic	Intergenic	-34582	NM_001244810	27086	Hs.59368	NM_032682	ENSG00000114861	FOXP1	12CC4|HSPC215|MFH|QRF1|hFKH1B	forkhead box P1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr3-1992	chr3	72300959	72301959	+	13.4	1000	Intergenic	MIRb|SINE|MIR	101051	NR_038221	201617	Hs.382623	NR_038221	ENSG00000243083	LINC00870	-	long intergenic non-protein coding RNA 870	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr3-1999	chr3	79068396	79069396	+	15.4	1000	promoter-TSS (NM_133631)	promoter-TSS (NM_133631)	-287	NM_133631	6091	Hs.744218	NM_002941	ENSG00000169855	ROBO1	DUTT1|SAX3	roundabout guidance receptor 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr3-2003	chr3	99476045	99477045	+	14.1	1000	"intron (NM_001850, intron 3 of 4)"	"intron (NM_001850, intron 3 of 4)"	-60133	NM_032359	84319	Hs.581320	NM_032359	ENSG00000184220	CMSS1	C3orf26	cms1 ribosomal small subunit homolog (yeast)	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr3-2007	chr3	112100443	112101443	+	15.4	1000	Intergenic	THE1A-int|LTR|ERVL-MaLR	49149	NM_001318830	4345	Hs.79015	NM_005944	ENSG00000091972	CD200	MOX1|MOX2|MRC|OX-2	CD200 molecule	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr3-2009	chr3	114023105	114024105	+	14.7	1000	"intron (NM_173799, intron 3 of 3)"	"intron (NM_173799, intron 3 of 3)"	10772	NM_173799	201633	Hs.421750	NM_173799	ENSG00000181847	TIGIT	VSIG9|VSTM3|WUCAM	T-cell immunoreceptor with Ig and ITIM domains	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr3-2010	chr3	115284416	115285416	+	15.4	1000	Intergenic	AluSp|SINE|Alu	-57235	NM_002045	2596	Hs.134974	NM_002045	ENSG00000172020	GAP43	B-50|PP46	growth associated protein 43	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr3-2012	chr3	115528941	115529941	+	15.4	1000	"intron (NM_002338, intron 6 of 6)"	"intron (NM_002338, intron 6 of 6)"	187290	NM_001130064	2596	Hs.134974	NM_002045	ENSG00000172020	GAP43	B-50|PP46	growth associated protein 43	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr3-2014	chr3	119304701	119305701	+	15.4	1000	"exon (NM_001125, exon 4 of 5)"	"exon (NM_001125, exon 4 of 5)"	6921	NM_001291950	141	Hs.99884	NM_001125	ENSG00000144843	ADPRH	ARH1	ADP-ribosylarginine hydrolase	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-2017	chr3	121960932	121961932	+	14.7	1000	"intron (NM_001178065, intron 1 of 6)"	L1MA2|LINE|L1	58251	NM_001178065	846	Hs.435615	NM_000388	ENSG00000036828	CASR	CAR|EIG8|FHH|FIH|GPRC2A|HHC|HHC1|HYPOC1|NSHPT|PCAR1	calcium sensing receptor	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr3-2018	chr3	121982688	121983688	+	14.1	1000	"intron (NM_001178065, intron 4 of 6)"	"intron (NM_001178065, intron 4 of 6)"	-60823	NM_005213	1475	Hs.518198	NM_005213	ENSG00000121552	CSTA	AREI|PSS4|STF1|STFA	cystatin A	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr3-2021	chr3	122706272	122707272	+	14.7	1000	"intron (NR_046079, intron 1 of 22)"	"intron (NR_046079, intron 1 of 22)"	5348	NM_001256346	54437	Hs.210870	NM_018987	ENSG00000082684	SEMA5B	SEMAG|SemG	semaphorin 5B	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr3-2026	chr3	123105286	123107998	+	46.7	2712	"intron (NM_183357, intron 1 of 20)"	L2b|LINE|L2	28547	NM_001199642	111	Hs.593292	NM_183357	ENSG00000173175	ADCY5	AC5|FDFM	adenylate cyclase 5	protein-coding	46.73	6.31	7.40570523	1.95E-19
chr3-2028	chr3	123135280	123136280	+	15.4	1000	promoter-TSS (NM_001199642)	promoter-TSS (NM_001199642)	-591	NM_001199642	111	Hs.593292	NM_183357	ENSG00000173175	ADCY5	AC5|FDFM	adenylate cyclase 5	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr3-203	chr3	137483896	137488153	+	70.4	4257	TTS (NM_004189)	TTS (NM_004189)	2890	NM_004189	8403	Hs.248184	NM_004189	ENSG00000168875	SOX14	SOX28	SRY-box 14	protein-coding	70.41	4.85	14.51752577	1.30E-43
chr3-2033	chr3	123380193	123381193	+	13.4	1000	"intron (NM_053027, intron 23 of 32)"	"intron (NM_053027, intron 23 of 32)"	-27798	NR_046629	100873940	Hs.667316	NR_046629	ENSG00000250174	MYLK-AS2	-	MYLK antisense RNA 2	ncRNA	13.44	0.97	13.8556701	8.12E-09
chr3-2034	chr3	123399054	123400054	+	14.1	1000	"intron (NM_053027, intron 20 of 32)"	"intron (NM_053027, intron 20 of 32)"	-8937	NR_046629	100873940	Hs.667316	NR_046629	ENSG00000250174	MYLK-AS2	-	MYLK antisense RNA 2	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr3-2036	chr3	123512151	123513151	+	15.4	1000	"exon (NM_053028, exon 4 of 32)"	"exon (NM_053028, exon 4 of 32)"	90498	NM_053026	4638	Hs.477375	NM_005965	ENSG00000065534	MYLK	AAT7|KRP|MLCK|MLCK1|MLCK108|MLCK210|MSTP083|MYLK1|smMLCK	myosin light chain kinase	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-2037	chr3	123751338	123754208	+	46.1	2870	Intergenic	CpG	-41756	NR_133917	54763	Hs.567516	NM_017578	ENSG00000065371	ROPN1	CT91|ODF6|RHPNAP1|ROPN1A|ropporin	rhophilin associated tail protein 1	protein-coding	46.09	4.85	9.503092784	4.65E-23
chr3-2038	chr3	123758565	123759565	+	15.4	1000	Intergenic	Intergenic	-48048	NR_133917	54763	Hs.567516	NM_017578	ENSG00000065371	ROPN1	CT91|ODF6|RHPNAP1|ROPN1A|ropporin	rhophilin associated tail protein 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-2039	chr3	123801962	123803229	+	17.9	1267	Intergenic	Intergenic	-10933	NR_028136	8997	Hs.8004	NM_003947	ENSG00000160145	KALRN	ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD	"kalirin, RhoGEF kinase"	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr3-2043	chr3	124518192	124519192	+	14.7	1000	"intron (NM_002213, intron 9 of 14)"	"intron (NM_002213, intron 9 of 14)"	67406	NR_036088	100422864		NR_036088	ENSG00000265981	MIR544B	-	microRNA 544b	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr3-2044	chr3	124591871	124592871	+	14.7	1000	"exon (NM_002213, exon 2 of 15)"	"exon (NM_002213, exon 2 of 15)"	13781	NM_002213	3693	Hs.13155	NM_002213	ENSG00000082781	ITGB5	-	integrin subunit beta 5	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr3-2047	chr3	124887023	124888023	+	15.4	1000	"intron (NM_024628, intron 5 of 13)"	"intron (NM_024628, intron 5 of 13)"	-17127	NR_049815	100847039		NR_049815	ENSG00000264986	MIR5092	-	microRNA 5092	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr3-2049	chr3	125997037	125998337	+	19.2	1300	Intergenic	MIR|SINE|MIR	78549	NM_014079	28999	Hs.272215	NM_014079	ENSG00000163884	KLF15	KKLF	Kruppel like factor 15	protein-coding	19.2	1.46	13.15068493	1.82E-12
chr3-2052	chr3	126232574	126233574	+	15.4	1000	"intron (NM_144639, intron 1 of 19)"	"intron (NM_144639, intron 1 of 19)"	3542	NM_001165974	131669	Hs.331148	NM_144639	ENSG00000159650	UROC1	HMFN0320|UROCD	urocanate hydratase 1	protein-coding	15.36	0	15.82260557	1.26E-14
chr3-2058	chr3	127014763	127015763	+	16.6	1000	Intergenic	L1MC5|LINE|L1	94250	NR_110147	101927123	Hs.526761	NR_110147	ENSG00000244215	LINC02016	-	long intergenic non-protein coding RNA 2016	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr3-2060	chr3	127135948	127137218	+	21.8	1270	Intergenic	MLT1L|LTR|ERVL-MaLR	-27070	NR_110147	101927123	Hs.526761	NR_110147	ENSG00000244215	LINC02016	-	long intergenic non-protein coding RNA 2016	ncRNA	21.76	4.85	4.486597938	5.54E-07
chr3-2061	chr3	127140439	127141439	+	14.7	1000	Intergenic	Intergenic	-31426	NR_110147	101927123	Hs.526761	NR_110147	ENSG00000244215	LINC02016	-	long intergenic non-protein coding RNA 2016	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr3-2063	chr3	127206750	127207750	+	15.4	1000	Intergenic	Intergenic	49373	NR_125397	101927149	Hs.407798	NR_125397	ENSG00000239921	LINC01471	-	long intergenic non-protein coding RNA 1471	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr3-2068	chr3	127707441	127708441	+	14.1	1000	Intergenic	MLT1L|LTR|ERVL-MaLR	-63271	NM_013336	29927	Hs.518236	NM_013336	ENSG00000058262	SEC61A1	HNFJ4|HSEC61|SEC61|SEC61A	Sec61 translocon alpha 1 subunit	protein-coding	14.08	0.49	28.73469388	3.99E-13
chr3-2070	chr3	128146159	128148804	+	42.2	2645	Intergenic	Intergenic	-34956	NR_037890	285224	Hs.683815	NR_037890	ENSG00000242049	DNAJB8-AS1	-	DNAJB8 antisense RNA 1	ncRNA	42.25	8.25	5.121212121	1.14E-13
chr3-2072	chr3	128171662	128173615	+	34.6	1953	Intergenic	Intergenic	-9799	NR_037890	285224	Hs.683815	NR_037890	ENSG00000242049	DNAJB8-AS1	-	DNAJB8 antisense RNA 1	ncRNA	34.56	6.8	5.082352941	2.10E-11
chr3-2077	chr3	128304596	128305596	+	15.4	1000	Intergenic	MER5A1|DNA|hAT-Charlie	-10167	NR_125802	23434	Hs.194283	NM_007354	ENSG00000198685	LINC01565	C3orf27|GR6	long intergenic non-protein coding RNA 1565	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr3-2080	chr3	129074047	129075047	+	14.1	1000	Intergenic	AluY|SINE|Alu	-39427	NM_006026	8971	Hs.75307	NM_006026	ENSG00000184897	H1FX	H1.10|H1X	H1 histone family member X	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr3-2081	chr3	129659915	129660915	+	15.4	1000	Intergenic	Charlie8|DNA|hAT-Charlie	-32821	NM_007117	7200	Hs.182231	NM_007117	ENSG00000170893	TRH	Pro-TRH|TRF	thyrotropin releasing hormone	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr3-2082	chr3	129686067	129687067	+	15.4	1000	Intergenic	Intergenic	-6669	NM_007117	7200	Hs.182231	NM_007117	ENSG00000170893	TRH	Pro-TRH|TRF	thyrotropin releasing hormone	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr3-2084	chr3	129696880	129697880	+	14.1	1000	TTS (NM_007117)	TTS (NM_007117)	4144	NM_007117	7200	Hs.182231	NM_007117	ENSG00000170893	TRH	Pro-TRH|TRF	thyrotropin releasing hormone	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr3-2089	chr3	133264997	133265997	+	14.7	1000	Intergenic	AluSq4|SINE|Alu	-26937	NM_001134422	55573	Hs.518265	NM_017548	ENSG00000091527	CDV3	H41	CDV3 homolog	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr3-2094	chr3	133778143	133780317	+	33.3	2174	Intergenic	Intergenic	-2738	NR_135574	100507210	Hs.669052	NR_135574	ENSG00000243832	LINC02000	-	long intergenic non-protein coding RNA 2000	ncRNA	33.28	3.88	8.577319588	4.55E-16
chr3-2095	chr3	134042295	134043295	+	15.4	1000	Intergenic	ERV3-16A3_LTR|LTR|ERVL	43909	NR_106885	102466744		NR_106885	ENSG00000277723	MIR6827	hsa-mir-6827	microRNA 6827	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr3-2096	chr3	134049702	134051004	+	19.8	1302	Intergenic	Intergenic	36351	NR_106885	102466744		NR_106885	ENSG00000277723	MIR6827	hsa-mir-6827	microRNA 6827	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr3-2098	chr3	134107118	134108118	+	15.4	1000	Intergenic	GA-rich|Low_complexity|Low_complexity	-13359	NM_001278683	51421	Hs.426312	NM_016201	ENSG00000114019	AMOTL2	LCCP	angiomotin like 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr3-2099	chr3	134123709	134126463	+	43.5	2754	Intergenic	Intergenic	-30827	NM_001278683	51421	Hs.426312	NM_016201	ENSG00000114019	AMOTL2	LCCP	angiomotin like 2	protein-coding	43.53	5.82	7.479381443	9.68E-19
chr3-210	chr3	164910547	164914581	+	62.1	4034	"intron (NM_001318811, intron 1 of 1)"	"intron (NM_001318811, intron 1 of 1)"	1226	NM_001318810	22865	Hs.101745	NM_014926	ENSG00000121871	SLITRK3	-	SLIT and NTRK like family member 3	protein-coding	62.09	9.71	6.394438723	8.28E-23
chr3-2100	chr3	134146883	134147883	+	15.4	1000	Intergenic	L2c|LINE|L2	-9286	NR_039951	100616281		NR_039951		MIR4788	-	microRNA 4788	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr3-2105	chr3	135531308	135532308	+	15.4	1000	Intergenic	Intergenic	-152707	NM_001190447	5523	Hs.518155	NM_002718	ENSG00000073711	PPP2R3A	PPP2R3|PR130|PR72	protein phosphatase 2 regulatory subunit B''alpha	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-2110	chr3	136977774	136978774	+	15.4	1000	Intergenic	Intergenic	301567	NM_144717	53833	Hs.61232	NM_144717	ENSG00000174564	IL20RB	DIRS1|FNDC6|IL-20R2	interleukin 20 receptor subunit beta	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr3-2111	chr3	137123782	137125468	+	24.3	1686	Intergenic	Intergenic	-358509	NM_004189	8403	Hs.248184	NM_004189	ENSG00000168875	SOX14	SOX28	SRY-box 14	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr3-2114	chr3	137681235	137682235	+	15.4	1000	Intergenic	Intergenic	-35923	NM_001002026	51208	Hs.655324	NM_016369	ENSG00000066405	CLDN18	SFTA5|SFTPJ	claudin 18	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-2116	chr3	137783387	137784675	+	18.6	1288	"intron (NM_173543, intron 14 of 15)"	"intron (NM_173543, intron 14 of 15)"	48291	NM_001170538	199221	Hs.351403	NM_173543	ENSG00000158163	DZIP1L	DZIP2	DAZ interacting zinc finger protein 1 like	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr3-2118	chr3	138128842	138129842	+	14.7	1000	Intergenic	Charlie4z|DNA|hAT-Charlie	-24073	NR_136409	83850	Hs.477711	NM_031913	ENSG00000158220	ESYT3	CHR3SYT|E-Syt3|FAM62C	extended synaptotagmin 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr3-212	chr3	182361339	182362339	+	21.1	1000	Intergenic	Intergenic	-136927	NR_134941	105374244	Hs.130176	NR_134941	ENSG00000244247	LINC01995	-	long intergenic non-protein coding RNA 1995	ncRNA	21.12	2.43	8.691358025	2.25E-10
chr3-2126	chr3	139551454	139552454	+	15.4	1000	Intergenic	LTR33B|LTR|ERVL	-102073	NM_022131	64084	Hs.158529	NM_022131	ENSG00000158258	CLSTN2	ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma	calsyntenin 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr3-2127	chr3	140056227	140057227	+	14.7	1000	"intron (NM_022131, intron 2 of 16)"	MIR|SINE|MIR	170904	NR_108084	101927808	Hs.581236	NR_108084	ENSG00000250433	CLSTN2-AS1	-	CLSTN2 antisense RNA 1	ncRNA	14.72	0	15.16333034	3.99E-13
chr3-2129	chr3	140778531	140779531	+	13.4	1000	"intron (NM_080862, intron 1 of 2)"	"intron (NM_080862, intron 1 of 2)"	8787	NM_080862	92369	Hs.655112	NM_080862	ENSG00000175093	SPSB4	SSB-4|SSB4	splA/ryanodine receptor domain and SOCS box containing 4	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr3-213	chr3	182399850	182401109	+	24.3	1259	Intergenic	CpG	-110812	NM_014616	23200	Hs.478429	NM_014616	ENSG00000058063	ATP11B	ATPIF|ATPIR	ATPase phospholipid transporting 11B (putative)	protein-coding	24.32	5.82	4.178694158	3.56E-07
chr3-2130	chr3	140922433	140923925	+	24.3	1492	Intergenic	Intergenic	-27488	NM_152282	92370	Hs.657887	NM_152282	ENSG00000155893	PXYLP1	ACPL2|HEL124|XYLP	2-phosphoxylose phosphatase 1	protein-coding	24.32	1.94	12.53608247	5.33E-15
chr3-2133	chr3	141137741	141139273	+	23	1532	"intron (NM_001080412, intron 7 of 7)"	MIRc|SINE|MIR	-67382	NM_006506	5922	Hs.98445	NM_006506	ENSG00000155903	RASA2	GAP1M	RAS p21 protein activator 2	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr3-2138	chr3	142606248	142609328	+	45.4	3080	"5' UTR (NM_013363, exon 1 of 9)"	"5' UTR (NM_013363, exon 1 of 9)"	257	NM_013363	26577	Hs.8944	NM_013363	ENSG00000163710	PCOLCE2	PCPE2	procollagen C-endopeptidase enhancer 2	protein-coding	45.45	5.34	8.511235955	8.61E-21
chr3-2140	chr3	142631080	142632080	+	15.4	1000	Intergenic	Intergenic	-13937	NR_038455	100507389	Hs.38715	NR_038455	ENSG00000243818	LOC100507389	-	uncharacterized LOC100507389	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr3-215	chr3	185540137	185546508	+	112.7	6371	promoter-TSS (NM_001291869)	promoter-TSS (NM_001291869)	-478	NR_138486	10644	Hs.35354	NM_006548	ENSG00000073792	IGF2BP2	IMP-2|IMP2|VICKZ2	insulin like growth factor 2 mRNA binding protein 2	protein-coding	112.65	17.47	6.448196909	5.84E-41
chr3-2151	chr3	148583544	148584848	+	21.1	1304	"intron (NM_001870, intron 2 of 10)"	L2c|LINE|L2	1153	NM_001870	1359	Hs.646	NM_001870	ENSG00000163751	CPA3	MC-CPA	carboxypeptidase A3	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr3-2153	chr3	148613190	148614514	+	19.8	1324	"intron (NM_001870, intron 10 of 10)"	"intron (NM_001870, intron 10 of 10)"	30809	NM_001870	1359	Hs.646	NM_001870	ENSG00000163751	CPA3	MC-CPA	carboxypeptidase A3	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr3-2156	chr3	150512037	150513037	+	14.7	1000	Intergenic	Intergenic	-31274	NM_005067	6478	Hs.477959	NM_005067	ENSG00000181788	SIAH2	hSiah2	siah E3 ubiquitin protein ligase 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr3-2158	chr3	150627984	150628984	+	14.7	1000	Intergenic	MLT1E1|LTR|ERVL-MaLR	33539	NM_052995	7401	Hs.745448	NM_052995	ENSG00000163646	CLRN1	RP61|USH3|USH3A	clarin 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr3-2164	chr3	157337718	157338718	+	14.7	1000	Intergenic	Intergenic	77085	NM_001130002	152078	Hs.259046	NM_001099777	ENSG00000174899	PQLC2L	C3orf55	PQ loop repeat containing 2 like	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr3-2168	chr3	161082053	161083053	+	14.7	1000	"intron (NM_001040100, intron 1 of 2)"	"intron (NM_001040100, intron 1 of 2)"	7318	NM_001040100	165679	Hs.369104	NM_145035	ENSG00000196542	SPTSSB	ADMP|C3orf57|SSSPTB	serine palmitoyltransferase small subunit B	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr3-2169	chr3	161121812	161123872	+	33.3	2060	Intergenic	LTR54B|LTR|ERV1	-21373	NR_102265	101243545	Hs.737526	NR_102265	ENSG00000240567	LINC02067	-	long intergenic non-protein coding RNA 2067	ncRNA	33.28	5.82	5.718213058	4.04E-12
chr3-2170	chr3	161128687	161129687	+	14.7	1000	Intergenic	LTR48B|LTR|ERV1	-15028	NR_102265	101243545	Hs.737526	NR_102265	ENSG00000240567	LINC02067	-	long intergenic non-protein coding RNA 2067	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr3-2175	chr3	169332556	169333556	+	14.7	1000	"intron (NM_004991, intron 1 of 16)"	L2a|LINE|L2	48507	NM_001205194	2122	Hs.744090	NM_004991	ENSG00000085276	MECOM	AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2	MDS1 and EVI1 complex locus	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr3-2176	chr3	170458275	170459275	+	15.4	1000	"intron (NR_135556, intron 5 of 5)"	"intron (NR_135556, intron 5 of 5)"	129270	NM_001320451	200916	Hs.380933	NM_001099645	ENSG00000163584	RPL22L1	-	ribosomal protein L22 like 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr3-2177	chr3	171189194	171190194	+	14.1	1000	Intergenic	Intergenic	-11497	NM_001161562	23043	Hs.34024	NM_015028	ENSG00000154310	TNIK	MRT54	TRAF2 and NCK interacting kinase	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr3-2182	chr3	181009148	181010148	+	12.8	1000	"intron (NR_075093, intron 2 of 4)"	"intron (NR_075093, intron 2 of 4)"	60123	NR_125730	103625684		NR_125730	ENSG00000207357	RNU6-2	U6-2	"RNA, U6 small nuclear 2"	snRNA	12.8	1.46	8.767123288	3.57E-07
chr3-2183	chr3	181016821	181017821	+	14.7	1000	"intron (NR_075093, intron 2 of 4)"	"intron (NR_075093, intron 2 of 4)"	67796	NR_125730	103625684		NR_125730	ENSG00000207357	RNU6-2	U6-2	"RNA, U6 small nuclear 2"	snRNA	14.72	2.91	5.058419244	2.67E-05
chr3-2187	chr3	181447268	181448268	+	14.7	1000	"intron (NR_004053, intron 4 of 4)"	"intron (NR_004053, intron 4 of 4)"	18056	NM_003106	6657	Hs.518438	NM_003106	ENSG00000181449	SOX2	ANOP3|MCOPS3	SRY-box 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr3-2188	chr3	181853386	181854386	+	14.7	1000	Intergenic	Intergenic	183734	NR_104146	100996490	Hs.606987	NR_104146	ENSG00000242512	LINC01206	-	long intergenic non-protein coding RNA 1206	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr3-2189	chr3	182221940	182222940	+	14.7	1000	"intron (NR_134941, intron 2 of 3)"	"intron (NR_134941, intron 2 of 3)"	2472	NR_134941	105374244	Hs.130176	NR_134941	ENSG00000244247	LINC01995	-	long intergenic non-protein coding RNA 1995	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr3-2196	chr3	184197032	184198579	+	23	1547	Intergenic	L2|LINE|L2	76901	NR_046593	100874079	Hs.574899	NR_046593	ENSG00000230215	LINC01840	EIF2B5-AS1	long intergenic non-protein coding RNA 1840	ncRNA	23.04	3.88	5.93814433	4.22E-09
chr3-2201	chr3	184405599	184406599	+	14.7	1000	Intergenic	Intergenic	23737	NM_022149	64110	Hs.306123	NM_022149	ENSG00000177383	MAGEF1	-	MAGE family member F1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr3-2202	chr3	184836616	184837616	+	15.4	1000	"intron (NM_001025266, intron 1 of 1)"	L1MA9|LINE|L1	33686	NM_001025266	285382	Hs.380048	NM_001025266	ENSG00000187068	C3orf70	-	chromosome 3 open reading frame 70	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-2209	chr3	186037926	186039478	+	27.5	1552	"intron (NM_001080744, intron 1 of 23)"	"intron (NM_001080744, intron 1 of 23)"	41321	NM_001080745	1608	Hs.683449	NM_001346	ENSG00000058866	DGKG	DAGK3|DGK-GAMMA	diacylglycerol kinase gamma	protein-coding	27.52	1.94	14.18556701	2.90E-17
chr3-221	chr3	13255012	13258341	+	48.6	3329	Intergenic	Intergenic	-142059	NM_001134382	9922	Hs.475506	NM_014869	ENSG00000144711	IQSEC1	ARF-GEP100|ARFGEP100|BRAG2|GEP100	IQ motif and Sec7 domain 1	protein-coding	48.65	7.28	6.682692308	3.68E-19
chr3-2210	chr3	186089961	186090961	+	15.4	1000	Intergenic	Intergenic	-10438	NM_001080744	1608	Hs.683449	NM_001346	ENSG00000058866	DGKG	DAGK3|DGK-GAMMA	diacylglycerol kinase gamma	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-2211	chr3	186175624	186176624	+	14.1	1000	"intron (NR_033844, intron 3 of 7)"	MER21C|LTR|ERVL	35326	NR_033844	253573	Hs.97386	NR_033844	ENSG00000224406	LINC02052	-	long intergenic non-protein coding RNA 2052	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr3-2212	chr3	186183353	186184353	+	14.1	1000	"intron (NR_033844, intron 3 of 7)"	"intron (NR_033844, intron 3 of 7)"	27597	NR_033844	253573	Hs.97386	NR_033844	ENSG00000224406	LINC02052	-	long intergenic non-protein coding RNA 2052	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr3-2213	chr3	186189451	186190451	+	15.4	1000	"intron (NR_033844, intron 3 of 7)"	"intron (NR_033844, intron 3 of 7)"	21499	NR_033844	253573	Hs.97386	NR_033844	ENSG00000224406	LINC02052	-	long intergenic non-protein coding RNA 2052	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr3-2214	chr3	186427272	186428910	+	21.8	1638	Intergenic	Intergenic	-7007	NM_001102416	3827	Hs.77741	NM_000893	ENSG00000113889	KNG1	BDK|BK|KNG	kininogen 1	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr3-2218	chr3	186938976	186939976	+	14.7	1000	"intron (NM_001879, intron 14 of 15)"	"intron (NM_001879, intron 14 of 15)"	-14059	NR_110052	101929106	Hs.640145	NR_110052	ENSG00000198491	LOC101929106	-	uncharacterized LOC101929106	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr3-2219	chr3	186973492	186974492	+	14.1	1000	"intron (NM_139125, intron 5 of 10)"	MER45A|DNA|hAT-Tip100	-35068	NR_135551	101929130		NR_135551	ENSG00000283175	LOC101929130	-	uncharacterized LOC101929130	ncRNA	14.08	1.46	9.643835616	3.66E-08
chr3-2230	chr3	193481831	193482831	+	15.4	1000	Intergenic	Intergenic	-137210	NR_046634	100873941	Hs.679364	NR_046634	ENSG00000224855	OPA1-AS1	-	OPA1 antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr3-2231	chr3	193499953	193500953	+	18.6	1000	Intergenic	Intergenic	-155332	NR_046634	100873941	Hs.679364	NR_046634	ENSG00000224855	OPA1-AS1	-	OPA1 antisense RNA 1	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr3-2235	chr3	193775364	193776364	+	15.4	1000	"intron (NR_136181, intron 1 of 3)"	"intron (NR_136181, intron 1 of 3)"	11454	NR_136181	285389	Hs.157102	NR_136179	ENSG00000230102	LINC02028	-	long intergenic non-protein coding RNA 2028	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr3-2239	chr3	194058617	194059617	+	15.4	1000	Intergenic	Intergenic	12940	NM_001080513	1370	Hs.528368	NM_001309	ENSG00000178772	CPN2	ACBP	carboxypeptidase N subunit 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr3-224	chr3	43918197	43919197	+	20.5	1000	Intergenic	Intergenic	-185611	NM_001346469	55129	Hs.656657	NM_018075	ENSG00000160746	ANO10	SCAR10|TMEM16K	anoctamin 10	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr3-2247	chr3	194545301	194546301	+	14.7	1000	Intergenic	Intergenic	116651	NR_037891	100507391	Hs.590099	NR_037891	ENSG00000237222	LINC01968	-	long intergenic non-protein coding RNA 1968	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr3-225	chr3	44036057	44037322	+	23	1265	Intergenic	CpG	-119015	NR_029700	406929		NR_029700	ENSG00000207954	MIR138-1	MIRN138-1|mir-138-1	microRNA 138-1	ncRNA	23.04	3.4	6.776470588	5.45E-10
chr3-2250	chr3	195729838	195730838	+	14.1	1000	Intergenic	D20S16|Satellite|Satellite	-13188	NR_003264	255812	Hs.566872	NR_003264	ENSG00000185485	SDHAP1	SDHAL1|SDHALP1	succinate dehydrogenase complex flavoprotein subunit A pseudogene 1	pseudo	14.08	2.91	4.838487973	2.67E-05
chr3-2254	chr3	197213912	197216985	+	39.7	3073	Intergenic	Intergenic	67410	NM_203314	622	Hs.274539	NM_004051	ENSG00000161267	BDH1	BDH|SDR9C1	3-hydroxybutyrate dehydrogenase 1	protein-coding	39.69	5.34	7.43258427	3.64E-17
chr3-231	chr3	53833318	53834318	+	19.8	1000	"intron (NM_001128840, intron 40 of 47)"	"intron (NM_001128840, intron 40 of 47)"	46602	NM_018397	55349	Hs.126688	NM_018397	ENSG00000016391	CHDH	-	choline dehydrogenase	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr3-232	chr3	53835906	53837810	+	32.6	1904	"intron (NM_001128840, intron 43 of 47)"	"intron (NM_001128840, intron 43 of 47)"	43562	NM_018397	55349	Hs.126688	NM_018397	ENSG00000016391	CHDH	-	choline dehydrogenase	protein-coding	32.64	4.85	6.729896907	5.03E-13
chr3-233	chr3	57198145	57199399	+	19.8	1254	"intron (NM_001318864, intron 2 of 13)"	CpG	655	NM_017563	54756	Hs.150725	NM_017563	ENSG00000144730	IL17RD	HH18|IL-17RD|IL17RLM|SEF	interleukin 17 receptor D	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr3-236	chr3	87038875	87040208	+	21.8	1333	"intron (NM_016206, intron 1 of 3)"	"intron (NM_016206, intron 1 of 3)"	732	NM_001320493	389136	Hs.606507	NM_016206	ENSG00000206538	VGLL3	VGL-3|VGL3	vestigial like family member 3	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr3-238	chr3	111577408	111580289	+	48.6	2881	"intron (NM_001134439, intron 1 of 17)"	"intron (NM_001134439, intron 1 of 17)"	280	NM_001134439	90102	Hs.603252	NM_145753	ENSG00000144824	PHLDB2	LL5b|LL5beta	pleckstrin homology like domain family B member 2	protein-coding	48.65	9.71	5.010298661	3.28E-15
chr3-239	chr3	111805073	111806814	+	28.8	1741	"intron (NM_001171747, intron 1 of 3)"	"intron (NM_001171747, intron 1 of 3)"	761	NM_024616	79669	Hs.434247	NM_024616	ENSG00000114529	C3orf52	TTMP	chromosome 3 open reading frame 52	protein-coding	28.8	5.34	5.393258427	7.39E-10
chr3-246	chr3	129691973	129695295	+	60.2	3322	"5' UTR (NM_007117, exon 1 of 3)"	"5' UTR (NM_007117, exon 1 of 3)"	398	NM_007117	7200	Hs.182231	NM_007117	ENSG00000170893	TRH	Pro-TRH|TRF	thyrotropin releasing hormone	protein-coding	60.17	10.19	5.904808636	3.60E-21
chr3-247	chr3	130235046	130236320	+	20.5	1274	Intergenic	Intergenic	-43495	NM_001102608	131873	Hs.591282	NM_001102608	ENSG00000206384	COL6A6	-	collagen type VI alpha 6 chain	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr3-253	chr3	161109240	161110240	+	20.5	1000	Intergenic	MIR|SINE|MIR	-19002	NM_001320679	165679	Hs.369104	NM_145035	ENSG00000196542	SPTSSB	ADMP|C3orf57|SSSPTB	serine palmitoyltransferase small subunit B	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr3-258	chr3	184096150	184100470	+	81.3	4320	promoter-TSS (NM_001289998)	promoter-TSS (NM_001289998)	449	NR_130747	8646	Hs.166186	NM_003741	ENSG00000090539	CHRD	-	chordin	protein-coding	81.29	9.71	8.371781668	7.84E-36
chr3-259	chr3	184208729	184210410	+	30.7	1681	Intergenic	AluSx|SINE|Alu	65137	NR_046593	100874079	Hs.574899	NR_046593	ENSG00000230215	LINC01840	EIF2B5-AS1	long intergenic non-protein coding RNA 1840	ncRNA	30.72	3.88	7.917525773	3.25E-14
chr3-263	chr3	186558979	186560552	+	30.7	1573	promoter-TSS (NM_001177800)	promoter-TSS (NM_001177800)	-698	NM_001177800	9370	Hs.80485	NM_004797	ENSG00000181092	ADIPOQ	ACDC|ACRP30|ADIPQTL1|ADPN|APM-1|APM1|GBP28	"adiponectin, C1Q and collagen domain containing"	protein-coding	30.72	6.8	4.517647059	2.53E-09
chr3-274	chr3	14563045	14564045	+	19.2	1000	"intron (NM_001080423, intron 6 of 24)"	"intron (NM_001080423, intron 6 of 24)"	18305	NM_001080423	80852	Hs.517819	NM_001080423	ENSG00000144596	GRIP2	-	glutamate receptor interacting protein 2	protein-coding	19.2	0	19.77825696	2.52E-19
chr3-285	chr3	37712672	37714079	+	26.9	1407	"intron (NM_002207, intron 17 of 27)"	"intron (NM_002207, intron 17 of 27)"	189896	NR_110532	101928153	Hs.657314	NR_110531	ENSG00000235257	ITGA9-AS1	-	ITGA9 antisense RNA 1	ncRNA	26.88	4.85	5.542268041	7.61E-10
chr3-286	chr3	38761462	38762462	+	19.8	1000	"intron (NM_001293307, intron 18 of 25)"	L1ME4a|LINE|L1	-70798	NM_001160160	6331	Hs.517898	NM_000335	ENSG00000183873	SCN5A	CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1	sodium voltage-gated channel alpha subunit 5	protein-coding	19.84	0.49	40.48979592	2.52E-19
chr3-29	chr3	181420961	181425786	+	96.7	4825	"intron (NR_075089, intron 3 of 3)"	"intron (NR_075089, intron 3 of 3)"	-6339	NM_003106	6657	Hs.518438	NM_003106	ENSG00000181449	SOX2	ANOP3|MCOPS3	SRY-box 2	protein-coding	96.65	21.84	4.4253663	5.10E-25
chr3-290	chr3	44123715	44125049	+	25.6	1334	Intergenic	Intergenic	-31322	NR_029700	406929		NR_029700	ENSG00000207954	MIR138-1	MIRN138-1|mir-138-1	microRNA 138-1	ncRNA	25.6	4.85	5.278350515	4.26E-09
chr3-297	chr3	48539895	48542249	+	43.5	2354	"intron (NM_001272068, intron 1 of 6)"	"intron (NM_001272068, intron 1 of 6)"	411	NM_001272068	51246	Hs.414579	NM_016479	ENSG00000164054	SHISA5	SCOTIN	shisa family member 5	protein-coding	43.53	4.85	8.975257732	4.10E-21
chr3-300	chr3	50423340	50424641	+	19.8	1301	"intron (NM_001005505, intron 5 of 37)"	"intron (NM_001005505, intron 5 of 37)"	21225	NR_111914	11068	Hs.149443	NM_007022	ENSG00000114395	CYB561D2	101F6|TSP10|XXcos-LUCA11.4	cytochrome b561 family member D2	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr3-302	chr3	54231112	54232112	+	18.6	1000	"intron (NM_018398, intron 2 of 37)"	"intron (NM_018398, intron 2 of 37)"	74919	NM_018398	55799	Hs.656687	NM_018398	ENSG00000157445	CACNA2D3	HSA272268	calcium voltage-gated channel auxiliary subunit alpha2delta 3	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr3-306	chr3	122732084	122735029	+	45.4	2945	"intron (NR_046079, intron 1 of 22)"	L3|LINE|CR1	13103	NM_001256348	54437	Hs.210870	NM_018987	ENSG00000082684	SEMA5B	SEMAG|SemG	semaphorin 5B	protein-coding	45.45	2.91	15.6185567	3.31E-29
chr3-310	chr3	127033066	127035577	+	40.3	2511	Intergenic	Intergenic	75192	NR_110147	101927123	Hs.526761	NR_110147	ENSG00000244215	LINC02016	-	long intergenic non-protein coding RNA 2016	ncRNA	40.33	5.82	6.929553265	3.74E-16
chr3-331	chr3	192633177	192635592	+	41.6	2415	"intron (NM_178496, intron 1 of 1)"	CpG	1566	NM_178496	151963	Hs.151443	NM_178496	ENSG00000180611	MB21D2	C3orf59	Mab-21 domain containing 2	protein-coding	41.61	4.37	9.52173913	1.60E-20
chr3-336	chr3	12837466	12838466	+	18.6	1000	promoter-TSS (NM_001162499)	promoter-TSS (NM_001162499)	-205	NM_012298	23066	Hs.343664	NM_012298	ENSG00000144712	CAND2	TIP120B|Tp120b	cullin associated and neddylation dissociated 2 (putative)	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr3-338	chr3	13919090	13922858	+	53.8	3768	"intron (NM_004625, intron 1 of 3)"	CpG	644	NM_004625	7476	Hs.72290	NM_004625	ENSG00000154764	WNT7A	-	Wnt family member 7A	protein-coding	53.77	8.74	6.152173913	9.88E-20
chr3-339	chr3	14407450	14410282	+	37.8	2832	Intergenic	L2a|LINE|L2	-14798	NR_110135	101927565	Hs.306905	NR_110135	ENSG00000251576	LINC01267	-	long intergenic non-protein coding RNA 1267	ncRNA	37.76	3.88	9.731958763	5.72E-19
chr3-340	chr3	15356010	15357573	+	30.7	1563	"intron (NM_001018009, intron 2 of 8)"	"intron (NM_001018009, intron 2 of 8)"	17345	NM_004844	9467	Hs.257761	NM_004844	ENSG00000131370	SH3BP5	SAB|SH3BP-5	SH3 domain binding protein 5	protein-coding	30.72	5.34	5.752808989	2.29E-11
chr3-343	chr3	37494428	37497488	+	43.5	3060	"intron (NM_002207, intron 1 of 27)"	"intron (NM_002207, intron 1 of 27)"	2145	NM_002207	3680	Hs.113157	NM_002207	ENSG00000144668	ITGA9	ALPHA-RLC|ITGA4L|RLC	integrin subunit alpha 9	protein-coding	43.53	5.82	7.479381443	9.68E-19
chr3-351	chr3	46519022	46520022	+	19.8	1000	"intron (NM_001321122, intron 1 of 19)"	"intron (NM_001321122, intron 1 of 19)"	7202	NM_001321122	4057	Hs.529517	NM_002343	ENSG00000012223	LTF	GIG12|HEL110|HLF2|LF	lactotransferrin	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr3-367	chr3	119332976	119335429	+	39.7	2453	"intron (NR_120610, intron 5 of 10)"	"intron (NR_120610, intron 5 of 10)"	15084	NM_001293225	51365	Hs.437451	NM_015900	ENSG00000144837	PLA1A	PS-PLA1|PSPLA1	phospholipase A1 member A	protein-coding	39.69	7.77	5.108108108	6.49E-13
chr3-387	chr3	137490358	137491720	+	21.1	1362	"intron (NR_109987, intron 1 of 4)"	"intron (NR_109987, intron 1 of 4)"	286	NR_109987	100507274	Hs.360349	NR_109987	ENSG00000239513	LINC01210	-	long intergenic non-protein coding RNA 1210	ncRNA	21.12	0.97	21.77319588	2.68E-16
chr3-391	chr3	161025148	161027339	+	41	2191	Intergenic	Tigger1|DNA|TcMar-Tigger	63628	NM_001040100	165679	Hs.369104	NM_145035	ENSG00000196542	SPTSSB	ADMP|C3orf57|SSSPTB	serine palmitoyltransferase small subunit B	protein-coding	40.97	4.85	8.44742268	3.22E-19
chr3-399	chr3	182316075	182317075	+	19.2	1000	Intergenic	Intergenic	-91663	NR_134941	105374244	Hs.130176	NR_134941	ENSG00000244247	LINC01995	-	long intergenic non-protein coding RNA 1995	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr3-403	chr3	184243607	184245257	+	29.4	1650	Intergenic	L1ME4a|LINE|L1	30274	NR_046593	100874079	Hs.574899	NR_046593	ENSG00000230215	LINC01840	EIF2B5-AS1	long intergenic non-protein coding RNA 1840	ncRNA	29.44	4.85	6.070103093	2.13E-11
chr3-408	chr3	189694828	189696255	+	23	1427	"intron (NM_001134418, intron 8 of 14)"	AluJr|SINE|Alu	-143212	NR_126419	101929152		NR_126419	ENSG00000225764	P3H2-AS1	LEPREL1-AS1	P3H2 antisense RNA 1	ncRNA	23.04	3.88	5.93814433	4.22E-09
chr3-409	chr3	193720040	193723120	+	58.2	3080	promoter-TSS (NR_033944)	promoter-TSS (NR_033944)	-132	NR_033944	647323	Hs.652830	NR_033944	ENSG00000214146	LINC02026	-	long intergenic non-protein coding RNA 2026	ncRNA	58.25	8.74	6.664759725	3.65E-22
chr3-415	chr3	10639923	10643215	+	52.5	3292	Intergenic	Intergenic	26923	NR_046766	100874325	Hs.143004	NR_046766	ENSG00000224771	ATP2B2-IT2	-	ATP2B2 intronic transcript 2	ncRNA	52.49	9.71	5.40576725	2.20E-17
chr3-417	chr3	13712645	13714154	+	26.9	1509	"intron (NR_027103, intron 1 of 5)"	"intron (NR_027103, intron 1 of 5)"	21178	NR_027103	285375	Hs.319969	NR_027103	ENSG00000224514	LINC00620	-	long intergenic non-protein coding RNA 620	ncRNA	26.88	3.88	6.927835052	1.44E-11
chr3-420	chr3	14664168	14665168	+	17.3	1000	Intergenic	LTR87|LTR|ERVL?	-28585	NR_135523	51244	Hs.517820	NM_016474	ENSG00000154781	CCDC174	C3orf19|HSPC212|IHPM|IHPMR	coiled-coil domain containing 174	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr3-423	chr3	15370980	15374867	+	67.2	3887	"intron (NM_001018009, intron 1 of 8)"	"intron (NM_001018009, intron 1 of 8)"	1213	NM_004844	9467	Hs.257761	NM_004844	ENSG00000131370	SH3BP5	SAB|SH3BP-5	SH3 domain binding protein 5	protein-coding	67.21	15.53	4.327752737	2.01E-17
chr3-426	chr3	32021711	32023816	+	41	2105	promoter-TSS (NM_001137674)	promoter-TSS (NM_001137674)	-503	NM_001137674	344787	Hs.585139	NM_001137674	ENSG00000197385	ZNF860	-	zinc finger protein 860	protein-coding	40.97	3.88	10.55927835	5.31E-22
chr3-428	chr3	32278314	32279925	+	32	1611	Intergenic	Intergenic	-1052	NM_178868	152189	Hs.154986	NM_178868	ENSG00000170293	CMTM8	CKLFSF8|CKLFSF8-V2	CKLF like MARVEL transmembrane domain containing 8	protein-coding	32	6.31	5.071315372	1.20E-10
chr3-430	chr3	37502498	37505360	+	53.1	2862	"intron (NM_002207, intron 1 of 27)"	"intron (NM_002207, intron 1 of 27)"	10116	NM_002207	3680	Hs.113157	NM_002207	ENSG00000144668	ITGA9	ALPHA-RLC|ITGA4L|RLC	integrin subunit alpha 9	protein-coding	53.13	8.25	6.44	8.48E-20
chr3-433	chr3	37518722	37519722	+	18.6	1000	"intron (NM_002207, intron 3 of 27)"	"intron (NM_002207, intron 3 of 27)"	25409	NM_002207	3680	Hs.113157	NM_002207	ENSG00000144668	ITGA9	ALPHA-RLC|ITGA4L|RLC	integrin subunit alpha 9	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr3-434	chr3	37574233	37575233	+	19.2	1000	"intron (NM_002207, intron 13 of 27)"	"intron (NM_002207, intron 13 of 27)"	80920	NM_002207	3680	Hs.113157	NM_002207	ENSG00000144668	ITGA9	ALPHA-RLC|ITGA4L|RLC	integrin subunit alpha 9	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr3-438	chr3	39243130	39246200	+	55	3070	Intergenic	Intergenic	-10578	NM_001198621	165904	Hs.447868	NM_194293	ENSG00000168334	XIRP1	CMYA1|Xin	xin actin binding repeat containing 1	protein-coding	55.05	7.28	7.561813187	1.86E-23
chr3-439	chr3	41305800	41306800	+	19.2	1000	"intron (NR_136342, intron 33 of 34)"	"intron (NR_136342, intron 33 of 34)"	65358	NM_001098209	1499	Hs.476018	NM_001904	ENSG00000168036	CTNNB1	CTNNB|MRD19|armadillo	catenin beta 1	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr3-451	chr3	50172009	50173267	+	21.8	1258	"intron (NR_135301, intron 2 of 3)"	"intron (NR_135301, intron 2 of 3)"	-19840	NM_001318798	6405	Hs.32981	NM_004186	ENSG00000001617	SEMA3F	SEMA-IV|SEMA4|SEMAK	semaphorin 3F	protein-coding	21.76	1.46	14.90410959	8.59E-15
chr3-453	chr3	50303252	50305793	+	43.5	2541	promoter-TSS (NM_004636)	promoter-TSS (NM_004636)	281	NR_110702	101928931	Hs.587216	NR_110702	ENSG00000232352	SEMA3B-AS1	-	SEMA3B antisense RNA 1 (head to head)	ncRNA	43.53	4.85	8.975257732	4.10E-21
chr3-456	chr3	50445442	50446699	+	22.4	1257	"intron (NM_001005505, intron 3 of 37)"	"intron (NM_001005505, intron 3 of 37)"	43305	NR_111914	11068	Hs.149443	NM_007022	ENSG00000114395	CYB561D2	101F6|TSP10|XXcos-LUCA11.4	cytochrome b561 family member D2	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr3-457	chr3	55515038	55516038	+	19.2	1000	promoter-TSS (NM_001256105)	promoter-TSS (NM_001256105)	-112	NM_001256105	7474	Hs.643085	NM_003392	ENSG00000114251	WNT5A	hWNT5A	Wnt family member 5A	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr3-461	chr3	66504195	66505195	+	18.6	1000	"intron (NM_015541, intron 2 of 18)"	"intron (NM_015541, intron 2 of 18)"	46150	NM_015541	26018	Hs.518055	NM_015541	ENSG00000144749	LRIG1	LIG-1|LIG1	leucine rich repeats and immunoglobulin like domains 1	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr3-464	chr3	122640921	122642600	+	29.4	1679	"intron (NR_046079, intron 10 of 22)"	MIRc|SINE|MIR	36400	NR_024618	100129550	Hs.61558	NR_024618	ENSG00000273033	LINC02035	-	long intergenic non-protein coding RNA 2035	ncRNA	29.44	5.34	5.513108614	1.33E-10
chr3-466	chr3	124308857	124309857	+	17.3	1000	"intron (NM_001322993, intron 1 of 26)"	"intron (NM_001322993, intron 1 of 26)"	5851	NM_001323001	8997	Hs.8004	NM_003947	ENSG00000160145	KALRN	ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD	"kalirin, RhoGEF kinase"	protein-coding	17.28	1.46	11.83561644	2.99E-10
chr3-467	chr3	124491175	124492621	+	21.8	1446	"intron (NM_002213, intron 11 of 14)"	AluSz|SINE|Alu	40612	NR_036088	100422864		NR_036088	ENSG00000265981	MIR544B	-	microRNA 544b	ncRNA	21.76	3.88	5.608247423	2.53E-08
chr3-468	chr3	126373152	126374152	+	18.6	1000	"exon (NM_001173513, exon 1 of 15)"	"exon (NM_001173513, exon 1 of 15)"	315	NM_001173513	114112	Hs.477475	NM_052883	ENSG00000197763	TXNRD3	TGR|TR2|TRXR3	thioredoxin reductase 3	protein-coding	18.56	0	19.11898173	9.96E-18
chr3-469	chr3	126380611	126381611	+	17.9	1000	"intron (NR_034158, intron 1 of 4)"	"intron (NR_034158, intron 1 of 4)"	187	NR_034158	255330	Hs.145435	NM_174935	ENSG00000198284	NUP210P1	C3orf46	nucleoporin 210 pseudogene 1	pseudo	17.92	2.91	6.158075601	1.38E-07
chr3-473	chr3	127681917	127682917	+	17.9	1000	"intron (NM_207335, intron 4 of 4)"	"intron (NM_207335, intron 4 of 4)"	40515	NM_207335	166348	Hs.132087	NM_207335	ENSG00000187715	KBTBD12	KLHDC6	kelch repeat and BTB domain containing 12	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr3-476	chr3	128719785	128722461	+	44.8	2676	"exon (NM_024768, exon 1 of 8)"	"exon (NM_024768, exon 1 of 8)"	651	NM_024768	79825	Hs.134807	NM_024768	ENSG00000114654	EFCC1	C3orf73|CCDC48	EF-hand and coiled-coil domain containing 1	protein-coding	44.81	4.85	9.239175258	4.43E-22
chr3-479	chr3	133452806	133453806	+	17.3	1000	Intergenic	L1MC4|LINE|L1	-11671	NM_001063	7018	Hs.518267	NM_001063	ENSG00000091513	TF	HEL-S-71p|PRO1557|PRO2086|TFQTL1	transferrin	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr3-488	chr3	169376114	169380599	+	85.8	4485	"intron (NM_004991, intron 1 of 16)"	"intron (NM_004991, intron 1 of 16)"	3207	NM_001205194	2122	Hs.744090	NM_004991	ENSG00000085276	MECOM	AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2	MDS1 and EVI1 complex locus	protein-coding	85.77	14.56	5.890796703	2.11E-29
chr3-496	chr3	184178861	184180288	+	23.7	1427	Intergenic	HERV16-int|LTR|ERVL	60249	NM_001322103	105374250	Hs.129464	NM_001322103		LINC02054	-	long intergenic non-protein coding RNA 2054	protein-coding	23.68	1.46	16.21917808	5.41E-16
chr3-497	chr3	184192447	184194076	+	28.2	1629	Intergenic	Intergenic	73936	NM_001322103	105374250	Hs.129464	NM_001322103		LINC02054	-	long intergenic non-protein coding RNA 2054	protein-coding	28.16	5.82	4.838487973	3.50E-09
chr3-501	chr3	186069257	186070257	+	18.6	1000	"intron (NM_001080744, intron 1 of 23)"	MER5B|DNA|hAT-Charlie	10266	NM_001080745	1608	Hs.683449	NM_001346	ENSG00000058866	DGKG	DAGK3|DGK-GAMMA	diacylglycerol kinase gamma	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr3-502	chr3	186430446	186431446	+	18.6	1000	Intergenic	Intergenic	-4152	NM_001102416	3827	Hs.77741	NM_000893	ENSG00000113889	KNG1	BDK|BK|KNG	kininogen 1	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr3-503	chr3	186924613	186925613	+	17.9	1000	"non-coding (NR_110052, exon 1 of 5)"	"non-coding (NR_110052, exon 1 of 5)"	304	NR_110052	101929106	Hs.640145	NR_110052	ENSG00000198491	LOC101929106	-	uncharacterized LOC101929106	ncRNA	17.92	0.97	18.4742268	1.12E-13
chr3-504	chr3	189035726	189036726	+	18.6	1000	"intron (NM_198485, intron 5 of 5)"	"intron (NM_198485, intron 5 of 5)"	-77843	NR_046722	100874027	Hs.616080	NR_046722	ENSG00000230115	TPRG1-AS2	-	TPRG1 antisense RNA 2	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr3-506	chr3	193528720	193529720	+	17.9	1000	Intergenic	Intergenic	182807	NR_027764	100128023	Hs.730112	NR_027764		DPPA2P3	-	developmental pluripotency associated 2 pseudogene 3	pseudo	17.92	3.4	5.270588235	8.42E-07
chr3-507	chr3	193701715	193702989	+	21.1	1274	"intron (NR_033944, intron 1 of 2)"	"intron (NR_033944, intron 1 of 2)"	9675	NR_027764	100128023	Hs.730112	NR_027764		DPPA2P3	-	developmental pluripotency associated 2 pseudogene 3	pseudo	21.12	3.88	5.443298969	1.44E-07
chr3-513	chr3	10623608	10625188	+	25.6	1580	Intergenic	L2a|LINE|L2	44094	NR_046766	100874325	Hs.143004	NR_046766	ENSG00000224771	ATP2B2-IT2	-	ATP2B2 intronic transcript 2	ncRNA	25.6	6.31	4.057052298	2.77E-07
chr3-516	chr3	10650027	10651027	+	18.6	1000	Intergenic	L2b|LINE|L2	17965	NR_046766	100874325	Hs.143004	NR_046766	ENSG00000224771	ATP2B2-IT2	-	ATP2B2 intronic transcript 2	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr3-517	chr3	11251721	11252721	+	17.3	1000	"intron (NM_001098212, intron 1 of 1)"	AluJb|SINE|Alu	-15448	NM_001098211	3269	Hs.1570	NM_000861	ENSG00000196639	HRH1	H1-R|H1R|HH1R|hisH1	histamine receptor H1	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr3-518	chr3	12916411	12917674	+	20.5	1263	Intergenic	Intergenic	9668	NR_136189	105376955	Hs.561179	NR_136189	ENSG00000232746	LINC02022	-	long intergenic non-protein coding RNA 2022	ncRNA	20.48	1.94	10.55670103	9.02E-12
chr3-520	chr3	13705705	13706962	+	19.2	1257	"intron (NR_027103, intron 1 of 5)"	"intron (NR_027103, intron 1 of 5)"	14112	NR_027103	285375	Hs.319969	NR_027103	ENSG00000224514	LINC00620	-	long intergenic non-protein coding RNA 620	ncRNA	19.2	0.97	19.79381443	5.65E-15
chr3-530	chr3	25492888	25493888	+	18.6	1000	"intron (NR_110893, intron 1 of 6)"	"intron (NR_110893, intron 1 of 6)"	-6413	NM_001290217	5915	Hs.543218	NM_000965	ENSG00000077092	RARB	HAP|MCOPS12|NR1B2|RARbeta1|RRB2	retinoic acid receptor beta	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr3-536	chr3	37767946	37768946	+	18.6	1000	"intron (NM_002207, intron 18 of 27)"	MER47B|DNA|TcMar-Tigger	134825	NR_110532	101928153	Hs.657314	NR_110531	ENSG00000235257	ITGA9-AS1	-	ITGA9 antisense RNA 1	ncRNA	18.56	2.43	7.637860082	1.53E-08
chr3-538	chr3	39146894	39149108	+	33.9	2214	"intron (NM_031899, intron 1 of 8)"	"intron (NM_031899, intron 1 of 8)"	-1151	NM_001105513	199223	Hs.443935	NM_145755	ENSG00000168026	TTC21A	IFT139A|STI2	tetratricopeptide repeat domain 21A	protein-coding	33.92	3.88	8.742268041	4.55E-16
chr3-542	chr3	44263914	44265187	+	19.8	1273	Intergenic	Intergenic	-18828	NM_001145030	375337	Hs.132125	NM_001145030	ENSG00000173769	TOPAZ1	C3orf77	testis and ovary specific PAZ domain containing 1	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr3-545	chr3	45173268	45174268	+	17.3	1000	"intron (NM_178181, intron 1 of 3)"	"intron (NM_178181, intron 1 of 3)"	14146	NM_022842	64866	Hs.476093	NM_022842	ENSG00000163814	CDCP1	CD318|SIMA135|TRASK	CUB domain containing protein 1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr3-550	chr3	46724558	46725984	+	21.1	1426	"intron (NR_135622, intron 9 of 24)"	"intron (NR_135622, intron 9 of 24)"	9875	NM_001190707	259173	Hs.517937	NM_147129	ENSG00000178038	ALS2CL	RN49018	ALS2 C-terminal like	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr3-556	chr3	50250236	50251922	+	25.6	1686	"intron (NM_006841, intron 1 of 15)"	"intron (NM_006841, intron 1 of 15)"	8400	NM_006841	10991	Hs.76460	NM_006841	ENSG00000188338	SLC38A3	G17|NAT1|SN1|SNAT3	solute carrier family 38 member 3	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr3-558	chr3	50312480	50313846	+	24.3	1366	"exon (NM_004636, exon 18 of 19)"	"exon (NM_004636, exon 18 of 19)"	2496	NR_106932	102465526		NR_106932	ENSG00000012171	MIR6872	hsa-mir-6872	microRNA 6872	ncRNA	24.32	4.37	5.565217391	4.38E-09
chr3-560	chr3	50510903	50512157	+	18.6	1254	"intron (NM_001005505, intron 2 of 37)"	MIR3|SINE|MIR	29498	NM_001174051	9254	Hs.476273	NM_006030	ENSG00000007402	CACNA2D2	CACNA2D	calcium voltage-gated channel auxiliary subunit alpha2delta 2	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr3-564	chr3	59748539	59749539	+	18.6	1000	"intron (NM_002012, intron 8 of 9)"	"intron (NM_002012, intron 8 of 9)"	317814	NM_001320901	2272	Hs.655995	NM_002012	ENSG00000189283	FHIT	AP3Aase|FRA3B	fragile histidine triad	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr3-568	chr3	66564077	66565077	+	16.6	1000	Intergenic	Tigger1|DNA|TcMar-Tigger	-13732	NM_015541	26018	Hs.518055	NM_015541	ENSG00000144749	LRIG1	LIG-1|LIG1	leucine rich repeats and immunoglobulin like domains 1	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr3-569	chr3	66634447	66635447	+	17.3	1000	Intergenic	L2a|LINE|L2	-84102	NM_015541	26018	Hs.518055	NM_015541	ENSG00000144749	LRIG1	LIG-1|LIG1	leucine rich repeats and immunoglobulin like domains 1	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr3-571	chr3	71959289	71960289	+	18.6	1000	Intergenic	MSTB1|LTR|ERVL-MaLR	-125432	NM_021935	60675	Hs.528665	NM_021935	ENSG00000163421	PROK2	BV8|HH4|KAL4|MIT1|PK2	prokineticin 2	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr3-575	chr3	112052043	112053043	+	17.9	1000	"intron (NM_001318830, intron 1 of 4)"	"intron (NM_001318830, intron 1 of 4)"	749	NM_001318830	4345	Hs.79015	NM_005944	ENSG00000091972	CD200	MOX1|MOX2|MRC|OX-2	CD200 molecule	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr3-576	chr3	120276065	120277065	+	17.9	1000	Intergenic	Intergenic	-38563	NM_004547	4710	Hs.304613	NM_004547	ENSG00000065518	NDUFB4	B15|CI-B15	NADH:ubiquinone oxidoreductase subunit B4	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr3-577	chr3	122652573	122653573	+	17.3	1000	"intron (NR_046079, intron 5 of 22)"	L1MC5|LINE|L1	41908	NM_001256347	54437	Hs.210870	NM_018987	ENSG00000082684	SEMA5B	SEMAG|SemG	semaphorin 5B	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr3-58	chr3	133046045	133047641	+	31.4	1596	"intron (NM_001282865, intron 2 of 3)"	L1M5|LINE|L1	-70878	NR_110812	101927455	Hs.570550	NR_110812	ENSG00000251011	TMEM108-AS1	-	TMEM108 antisense RNA 1	ncRNA	31.36	2.91	10.7766323	6.73E-17
chr3-588	chr3	124766574	124769724	+	56.3	3150	"intron (NM_020733, intron 1 of 16)"	"intron (NM_020733, intron 1 of 16)"	6653	NM_020733	57493	Hs.477420	NM_020733	ENSG00000173706	HEG1	HEG|MST112|MSTP112	heart development protein with EGF like domains 1	protein-coding	56.33	10.68	5.274344569	3.77E-18
chr3-592	chr3	127264317	127265579	+	19.2	1262	Intergenic	Intergenic	-8325	NR_125397	101927149	Hs.407798	NR_125397	ENSG00000239921	LINC01471	-	long intergenic non-protein coding RNA 1471	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr3-594	chr3	127475373	127476373	+	18.6	1000	"intron (NM_001003794, intron 3 of 7)"	MLT1H|LTR|ERVL-MaLR	65852	NM_007283	11343	Hs.277035	NM_007283	ENSG00000074416	MGLL	HU-K5|HUK5|MAGL|MGL	monoglyceride lipase	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr3-598	chr3	129679384	129680384	+	17.9	1000	Intergenic	Intergenic	-13352	NM_007117	7200	Hs.182231	NM_007117	ENSG00000170893	TRH	Pro-TRH|TRF	thyrotropin releasing hormone	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr3-600	chr3	134092253	134094837	+	51.8	2584	promoter-TSS (NM_016201)	promoter-TSS (NM_016201)	-118	NM_016201	51421	Hs.426312	NM_016201	ENSG00000114019	AMOTL2	LCCP	angiomotin like 2	protein-coding	51.85	4.37	11.86498856	9.26E-29
chr3-602	chr3	138656956	138670868	+	247.7	13912	"3' UTR (NM_023067, exon 1 of 1)"	"3' UTR (NM_023067, exon 1 of 1)"	-1050	NR_121649	103344930	Hs.195033	NR_121649	ENSG00000244578	LINC01391	-	long intergenic non-protein coding RNA 1391	ncRNA	247.71	33.98	7.289876398	3.29E-96
chr3-605	chr3	140624550	140625550	+	18.6	1000	Intergenic	MIR|SINE|MIR	-35612	NM_018155	55186	Hs.144130	NM_018155	ENSG00000114120	SLC25A36	PNC2	solute carrier family 25 member 36	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr3-610	chr3	142681246	142682246	+	18.6	1000	"exon (NM_198504, exon 1 of 1)"	"exon (NM_198504, exon 1 of 1)"	432	NM_198504	344838	Hs.408385	NM_198504	ENSG00000188582	PAQR9	-	progestin and adipoQ receptor family member 9	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr3-611	chr3	148697130	148698389	+	21.1	1259	Intergenic	L1ME1|LINE|L1	-11436	NM_001184721	2992	Hs.477892	NM_004130	ENSG00000163754	GYG1	GSD15|GYG	glycogenin 1	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr3-616	chr3	161087930	161091473	+	75.5	3543	"5' UTR (NM_001320679, exon 1 of 4)"	"5' UTR (NM_001320679, exon 1 of 4)"	170	NM_001040100	165679	Hs.369104	NM_145035	ENSG00000196542	SPTSSB	ADMP|C3orf57|SSSPTB	serine palmitoyltransferase small subunit B	protein-coding	75.53	13.59	5.557763061	7.31E-25
chr3-625	chr3	180403685	180404685	+	16.6	1000	Intergenic	L1MC3|LINE|L1	-6902	NM_181426	339829	Hs.712820	NM_181426	ENSG00000145075	CCDC39	CILD14|FAP59	coiled-coil domain containing 39	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr3-630	chr3	184321224	184322509	+	19.8	1285	Intergenic	CpG	42279	NM_004443	2049	Hs.2913	NM_004443	ENSG00000182580	EPHB3	EK2|ETK2|HEK2|TYRO6	EPH receptor B3	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr3-635	chr3	186542585	186544554	+	35.2	1969	promoter-TSS (NR_125409)	promoter-TSS (NR_125409)	-259	NR_125409	102724699	Hs.518476	NR_125409	ENSG00000232233	LINC02043	-	long intergenic non-protein coding RNA 2043	ncRNA	35.2	4.85	7.257731959	1.02E-14
chr3-642	chr3	193596822	193597822	+	16.6	1000	Intergenic	MER81|DNA|hAT-Blackjack	114705	NR_027764	100128023	Hs.730112	NR_027764		DPPA2P3	-	developmental pluripotency associated 2 pseudogene 3	pseudo	16.64	3.88	4.288659794	1.81E-05
chr3-644	chr3	193793499	193794499	+	17.9	1000	Intergenic	Intergenic	-5240	NR_136179	285389	Hs.157102	NR_136179	ENSG00000230102	LINC02028	-	long intergenic non-protein coding RNA 2028	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr3-646	chr3	194652280	194653601	+	21.8	1321	Intergenic	Intergenic	-162377	NR_104188	100874528	Hs.581659	NR_104188	ENSG00000233303	XXYLT1-AS1	-	XXYLT1 antisense RNA 1	ncRNA	21.76	2.91	7.47766323	3.87E-10
chr3-647	chr3	2552327	2553593	+	19.8	1266	"intron (NM_175607, intron 3 of 24)"	"intron (NM_175607, intron 3 of 24)"	272447	NM_001206955	152330	Hs.298705	NM_175607	ENSG00000144619	CNTN4	AXCAM|BIG-2	contactin 4	protein-coding	19.84	0	20.43753219	2.52E-19
chr3-649	chr3	5366251	5367251	+	16.6	1000	Intergenic	LTR16A1|LTR|ERVL	-74811	NR_039953	100616334		NR_039953	ENSG00000265180	MIR4790	-	microRNA 4790	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr3-65	chr3	99369918	99372344	+	50.6	2426	"intron (NM_020351, intron 1 of 3)"	"intron (NM_020351, intron 1 of 3)"	13691	NM_001850	1295	Hs.654548	NM_001850	ENSG00000144810	COL8A1	C3orf7	collagen type VIII alpha 1 chain	protein-coding	50.57	10.68	4.735018727	1.25E-14
chr3-650	chr3	10469926	10470926	+	17.3	1000	"intron (NM_001330611, intron 2 of 21)"	"intron (NM_001330611, intron 2 of 21)"	-34180	NR_030614	100126334		NR_030614	ENSG00000216135	MIR885	MIRN885|hsa-mir-885|mir-885	microRNA 885	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr3-652	chr3	10596352	10597352	+	16.6	1000	Intergenic	MIR|SINE|MIR	-49478	NM_001330611	491	Hs.268942	NM_001683	ENSG00000157087	ATP2B2	PMCA2|PMCA2a|PMCA2i	ATPase plasma membrane Ca2+ transporting 2	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr3-653	chr3	10609909	10610909	+	17.9	1000	Intergenic	Intergenic	58083	NR_046766	100874325	Hs.143004	NR_046766	ENSG00000224771	ATP2B2-IT2	-	ATP2B2 intronic transcript 2	ncRNA	17.92	1.46	12.2739726	2.41E-11
chr3-656	chr3	11197364	11198364	+	17.3	1000	"intron (NM_001098212, intron 1 of 1)"	"intron (NM_001098212, intron 1 of 1)"	1650	NM_001098212	3269	Hs.1570	NM_000861	ENSG00000196639	HRH1	H1-R|H1R|HH1R|hisH1	histamine receptor H1	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr3-659	chr3	12182152	12183152	+	16.6	1000	"intron (NM_133625, intron 3 of 13)"	"intron (NM_133625, intron 3 of 13)"	18199	NM_003256	7079	Hs.591665	NM_003256	ENSG00000157150	TIMP4	-	TIMP metallopeptidase inhibitor 4	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr3-661	chr3	13163349	13164349	+	17.9	1000	Intergenic	L2a|LINE|L2	-49232	NM_001134382	9922	Hs.475506	NM_014869	ENSG00000144711	IQSEC1	ARF-GEP100|ARFGEP100|BRAG2|GEP100	IQ motif and Sec7 domain 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr3-663	chr3	13249787	13250787	+	17.9	1000	Intergenic	Intergenic	-135670	NM_001134382	9922	Hs.475506	NM_014869	ENSG00000144711	IQSEC1	ARF-GEP100|ARFGEP100|BRAG2|GEP100	IQ motif and Sec7 domain 1	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr3-664	chr3	13870962	13871962	+	17.3	1000	"intron (NM_004625, intron 3 of 3)"	"intron (NM_004625, intron 3 of 3)"	50156	NM_004625	7476	Hs.72290	NM_004625	ENSG00000154764	WNT7A	-	Wnt family member 7A	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr3-665	chr3	13875602	13876602	+	16.6	1000	"intron (NM_004625, intron 3 of 3)"	L2a|LINE|L2	45516	NM_004625	7476	Hs.72290	NM_004625	ENSG00000154764	WNT7A	-	Wnt family member 7A	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr3-667	chr3	14386068	14389927	+	62.1	3859	Intergenic	Intergenic	6071	NR_110135	101927565	Hs.306905	NR_110135	ENSG00000251576	LINC01267	-	long intergenic non-protein coding RNA 1267	ncRNA	62.09	13.11	4.736079329	1.12E-17
chr3-676	chr3	17813577	17815436	+	33.3	1859	Intergenic	Intergenic	30070	NR_135536	105376975	Hs.543238	NR_135536		LOC105376975	-	uncharacterized LOC105376975	ncRNA	33.28	6.31	5.274167987	2.25E-11
chr3-682	chr3	32267400	32271561	+	57	4161	Intergenic	Intergenic	-10691	NM_178868	152189	Hs.154986	NM_178868	ENSG00000170293	CMTM8	CKLFSF8|CKLFSF8-V2	CKLF like MARVEL transmembrane domain containing 8	protein-coding	56.97	10.68	5.334269663	3.77E-18
chr3-686	chr3	37686051	37687051	+	17.3	1000	"intron (NM_002207, intron 16 of 27)"	"intron (NM_002207, intron 16 of 27)"	192738	NM_002207	3680	Hs.113157	NM_002207	ENSG00000144668	ITGA9	ALPHA-RLC|ITGA4L|RLC	integrin subunit alpha 9	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr3-688	chr3	38690018	38691018	+	17.9	1000	"intron (NM_001099405, intron 1 of 26)"	CpG	645	NM_001099404	6331	Hs.517898	NM_000335	ENSG00000183873	SCN5A	CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1	sodium voltage-gated channel alpha subunit 5	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr3-689	chr3	40427658	40428908	+	19.8	1250	promoter-TSS (NM_001248)	promoter-TSS (NM_001248)	-364	NM_001291961	956	Hs.441145	NM_001248	ENSG00000168032	ENTPD3	CD39L3|HB6|NTPDase-3	ectonucleoside triphosphate diphosphohydrolase 3	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr3-693	chr3	42736768	42738059	+	19.8	1291	"intron (NM_020707, intron 9 of 11)"	L2|LINE|L2	5600	NR_027753	57467	Hs.476041	NM_020707	ENSG00000010282	HHATL	C3orf3|GUP1|MBOAT3|MSTP002|OACT3	hedgehog acyltransferase-like	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr3-694	chr3	44060682	44062425	+	26.9	1743	Intergenic	Intergenic	-94151	NR_029700	406929		NR_029700	ENSG00000207954	MIR138-1	MIRN138-1|mir-138-1	microRNA 138-1	ncRNA	26.88	2.91	9.237113402	7.03E-14
chr3-703	chr3	45307952	45308952	+	17.9	1000	Intergenic	Intergenic	-40638	NM_015444	25907	Hs.740403	NM_015444	ENSG00000249992	TMEM158	BBP|RIS1|p40BBP	transmembrane protein 158 (gene/pseudogene)	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr3-704	chr3	45333269	45334537	+	20.5	1268	Intergenic	MLT1B|LTR|ERVL-MaLR	-66089	NM_015444	25907	Hs.740403	NM_015444	ENSG00000249992	TMEM158	BBP|RIS1|p40BBP	transmembrane protein 158 (gene/pseudogene)	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr3-705	chr3	45362281	45363281	+	17.3	1000	Intergenic	Intergenic	-67294	NM_015340	23395	Hs.526975	NM_015340	ENSG00000011376	LARS2	HLASA|LEURS|PRLTS4|mtLeuRS	"leucyl-tRNA synthetase 2, mitochondrial"	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr3-71	chr3	17805394	17806646	+	25	1252	Intergenic	Intergenic	21584	NR_135536	105376975	Hs.543238	NR_135536		LOC105376975	-	uncharacterized LOC105376975	ncRNA	24.96	5.34	4.674157303	9.72E-08
chr3-711	chr3	48598937	48600193	+	16	1256	promoter-TSS (NM_001317136)	promoter-TSS (NM_001317136)	-952	NM_001317136	5210	Hs.476217	NM_004567	ENSG00000114268	PFKFB4	-	"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4"	protein-coding	16	3.88	4.12371134	7.91E-05
chr3-712	chr3	50185040	50194543	+	155.5	9503	"intron (NR_135301, intron 1 of 3)"	"intron (NR_135301, intron 1 of 3)"	-2687	NM_001318798	6405	Hs.32981	NM_004186	ENSG00000001617	SEMA3F	SEMA-IV|SEMA4|SEMAK	semaphorin 3F	protein-coding	155.54	24.27	6.408735064	3.50E-55
chr3-727	chr3	53621700	53622700	+	17.3	1000	"intron (NM_001128840, intron 3 of 47)"	"intron (NM_001128840, intron 3 of 47)"	93124	NM_000720	776	Hs.476358	NM_000720	ENSG00000157388	CACNA1D	CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD	calcium voltage-gated channel subunit alpha1 D	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr3-728	chr3	53797058	53798058	+	16.6	1000	"intron (NM_001128839, intron 30 of 45)"	"intron (NM_001128839, intron 30 of 45)"	82862	NM_018397	55349	Hs.126688	NM_018397	ENSG00000016391	CHDH	-	choline dehydrogenase	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr3-730	chr3	55520450	55521816	+	19.8	1366	"5' UTR (NM_003392, exon 1 of 5)"	"5' UTR (NM_003392, exon 1 of 5)"	537	NM_003392	7474	Hs.643085	NM_003392	ENSG00000114251	WNT5A	hWNT5A	Wnt family member 5A	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr3-734	chr3	61546415	61547984	+	23.7	1569	promoter-TSS (NM_002841)	promoter-TSS (NM_002841)	-44	NM_002841	5793	Hs.595541	NM_002841	ENSG00000144724	PTPRG	HPTPG|PTPG|R-PTP-GAMMA|RPTPG	"protein tyrosine phosphatase, receptor type G"	protein-coding	23.68	0.97	24.41237113	5.03E-19
chr3-735	chr3	65940827	65941827	+	17.9	1000	"intron (NM_015520, intron 1 of 24)"	"intron (NM_015520, intron 1 of 24)"	61836	NR_046575	100873983	Hs.663889	NR_046575	ENSG00000240175	MAGI1-AS1	-	MAGI1 antisense RNA 1	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr3-736	chr3	66492734	66494286	+	23.7	1552	"intron (NM_015541, intron 3 of 18)"	"intron (NM_015541, intron 3 of 18)"	57335	NM_015541	26018	Hs.518055	NM_015541	ENSG00000144749	LRIG1	LIG-1|LIG1	leucine rich repeats and immunoglobulin like domains 1	protein-coding	23.68	5.34	4.434456929	4.49E-07
chr3-743	chr3	73167534	73169750	+	34.6	2216	Intergenic	Intergenic	57832	NM_018029	55096	Hs.658858	NM_018029	ENSG00000255423	EBLN2	EBLN-2	endogenous Bornavirus-like nucleoprotein 2	protein-coding	34.56	2.91	11.87628866	4.47E-20
chr3-744	chr3	99359573	99362309	+	46.1	2736	"intron (NM_020351, intron 1 of 3)"	"intron (NM_020351, intron 1 of 3)"	3501	NM_001850	1295	Hs.654548	NM_001850	ENSG00000144810	COL8A1	C3orf7	collagen type VIII alpha 1 chain	protein-coding	46.09	10.68	4.315543071	1.21E-12
chr3-759	chr3	123812234	123813234	+	17.9	1000	promoter-TSS (NM_001322990)	promoter-TSS (NM_001322990)	-794	NR_028136	8997	Hs.8004	NM_003947	ENSG00000160145	KALRN	ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD	"kalirin, RhoGEF kinase"	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr3-761	chr3	124853096	124854096	+	16.6	1000	"intron (NM_024628, intron 6 of 13)"	L1ME1|LINE|L1	16800	NR_049815	100847039		NR_049815	ENSG00000264986	MIR5092	-	microRNA 5092	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr3-762	chr3	126420017	126421017	+	17.9	1000	Intergenic	L1MA9|LINE|L1	-2546	NM_032343	84303	Hs.518119	NM_032343	ENSG00000159685	CHCHD6	CHCM1|Mic25|PPP1R23	coiled-coil-helix-coiled-coil-helix domain containing 6	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr3-764	chr3	126887771	126888771	+	16.6	1000	Intergenic	L1M5|LINE|L1	-23703	NM_001007534	285311	Hs.591284	NM_001007534		C3orf56	-	chromosome 3 open reading frame 56	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr3-766	chr3	127144670	127145670	+	17.9	1000	Intergenic	Intergenic	-35657	NR_110147	101927123	Hs.526761	NR_110147	ENSG00000244215	LINC02016	-	long intergenic non-protein coding RNA 2016	ncRNA	17.92	0.97	18.4742268	1.12E-13
chr3-77	chr3	45165927	45167477	+	29.4	1550	"intron (NM_178181, intron 1 of 3)"	L2c|LINE|L2	21212	NM_022842	64866	Hs.476093	NM_022842	ENSG00000163814	CDCP1	CD318|SIMA135|TRASK	CUB domain containing protein 1	protein-coding	29.44	6.8	4.329411765	1.16E-08
chr3-771	chr3	128185606	128186606	+	17.9	1000	promoter-TSS (NM_153330)	promoter-TSS (NM_153330)	-15	NM_153330	165721	Hs.518241	NM_153330	ENSG00000179407	DNAJB8	CT156|DJ6	DnaJ heat shock protein family (Hsp40) member B8	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr3-773	chr3	128218317	128219317	+	16	1000	"intron (NR_125398, intron 2 of 2)"	L2b|LINE|L2	-6787	NM_032638	2624	Hs.367725	NM_032638	ENSG00000179348	GATA2	DCML|IMD21|MONOMAC|NFE1B	GATA binding protein 2	protein-coding	16	1.46	10.95890411	3.44E-09
chr3-776	chr3	129708363	129709618	+	21.1	1255	Intergenic	Intergenic	15754	NM_007117	7200	Hs.182231	NM_007117	ENSG00000170893	TRH	Pro-TRH|TRF	thyrotropin releasing hormone	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr3-778	chr3	133090023	133091023	+	17.3	1000	"intron (NM_001282865, intron 2 of 3)"	MLT1G1|LTR|ERVL-MaLR	-28316	NM_003571	8419	Hs.659862	NM_003571	ENSG00000170819	BFSP2	CP47|CP49|CTRCT12|LIFL-L|PHAKOSIN	beaded filament structural protein 2	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr3-783	chr3	137806926	137807926	+	17.3	1000	"intron (NM_173543, intron 5 of 15)"	"intron (NM_173543, intron 5 of 15)"	24896	NM_001170538	199221	Hs.351403	NM_173543	ENSG00000158163	DZIP1L	DZIP2	DAZ interacting zinc finger protein 1 like	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr3-785	chr3	140907086	140908691	+	26.2	1605	Intergenic	HAL1|LINE|L1	-42779	NM_152282	92370	Hs.657887	NM_152282	ENSG00000155893	PXYLP1	ACPL2|HEL124|XYLP	2-phosphoxylose phosphatase 1	protein-coding	26.24	2.43	10.79835391	2.44E-14
chr3-786	chr3	141442601	141443601	+	15.4	1000	Intergenic	HAL1|LINE|L1	-13950	NM_014245	9616	Hs.134623	NM_014245	ENSG00000114125	RNF7	CKBBP1|ROC2|SAG	ring finger protein 7	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-793	chr3	150641315	150642579	+	18.6	1264	Intergenic	Intergenic	20076	NM_052995	7401	Hs.745448	NM_052995	ENSG00000163646	CLRN1	RP61|USH3|USH3A	clarin 1	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr3-800	chr3	169383737	169384737	+	17.9	1000	Intergenic	(TTTTC)n|Simple_repeat|Simple_repeat	-2674	NM_004991	2122	Hs.744090	NM_004991	ENSG00000085276	MECOM	AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2	MDS1 and EVI1 complex locus	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr3-808	chr3	182976332	182977332	+	17.9	1000	"intron (NM_032047, intron 1 of 1)"	MER2|DNA|TcMar-Tigger	5800	NM_032047	84002	Hs.718506	NM_032047	ENSG00000176597	B3GNT5	B3GN-T5|beta3Gn-T5	"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5"	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr3-810	chr3	183791227	183792530	+	21.1	1303	Intergenic	Tigger1|DNA|TcMar-Tigger	21043	NM_130770	170572	Hs.632579	NM_130770	ENSG00000178084	HTR3C	-	5-hydroxytryptamine receptor 3C	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr3-811	chr3	183945988	183951106	+	76.8	5118	"exon (NM_138345, exon 2 of 19)"	"exon (NM_138345, exon 2 of 19)"	330	NM_138345	90113	Hs.584997	NM_138345	ENSG00000145198	VWA5B2	-	von Willebrand factor A domain containing 5B2	protein-coding	76.81	10.68	7.191947566	6.24E-31
chr3-812	chr3	183997417	183998417	+	17.9	1000	"intron (NM_001037324, intron 6 of 17)"	"intron (NM_001037324, intron 6 of 17)"	4118	NM_001100121	9718	Hs.146161	NM_014693	ENSG00000145194	ECE2	-	endothelin converting enzyme 2	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr3-813	chr3	184232661	184233939	+	20.5	1278	Intergenic	L2a|LINE|L2	41406	NR_046593	100874079	Hs.574899	NR_046593	ENSG00000230215	LINC01840	EIF2B5-AS1	long intergenic non-protein coding RNA 1840	ncRNA	20.48	2.43	8.427983539	2.25E-10
chr3-814	chr3	184475303	184476577	+	17.9	1274	"non-coding (NR_110043, exon 3 of 3)"	"non-coding (NR_110043, exon 3 of 3)"	15003	NR_110043	101928992	Hs.507129	NR_110043	ENSG00000229433	LINC02069	-	long intergenic non-protein coding RNA 2069	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr3-816	chr3	185501860	185502860	+	17.9	1000	"intron (NR_138486, intron 2 of 15)"	"intron (NR_138486, intron 2 of 15)"	-16668	NR_049838	100847078		NR_049838	ENSG00000265470	MIR548AQ	-	microRNA 548aq	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr3-819	chr3	189039597	189042039	+	38.4	2442	"3' UTR (NM_198485, exon 6 of 6)"	"3' UTR (NM_198485, exon 6 of 6)"	-82435	NR_046722	100874027	Hs.616080	NR_046722	ENSG00000230115	TPRG1-AS2	-	TPRG1 antisense RNA 2	ncRNA	38.4	9.22	4.164859002	1.94E-10
chr3-821	chr3	193823779	193824779	+	17.9	1000	Intergenic	MLT1A|LTR|ERVL-MaLR	-29652	NM_005524	3280	Hs.250666	NM_005524	ENSG00000114315	HES1	HES-1|HHL|HRY|bHLHb39	hes family bHLH transcription factor 1	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr3-823	chr3	194441167	194442167	+	15.4	1000	"intron (NR_037891, intron 1 of 3)"	"intron (NR_037891, intron 1 of 3)"	12517	NR_037891	100507391	Hs.590099	NR_037891	ENSG00000237222	LINC01968	-	long intergenic non-protein coding RNA 1968	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr3-826	chr3	194724248	194725512	+	20.5	1264	Intergenic	Intergenic	-90437	NR_104188	100874528	Hs.581659	NR_104188	ENSG00000233303	XXYLT1-AS1	-	XXYLT1 antisense RNA 1	ncRNA	20.48	1.94	10.55670103	9.02E-12
chr3-827	chr3	3138056	3141220	+	54.4	3164	"exon (NM_175726, exon 7 of 12)"	"exon (NM_175726, exon 7 of 12)"	12420	NM_175726	3568	Hs.68876	NM_000564	ENSG00000091181	IL5RA	CD125|CDw125|HSIL5R3|IL5R	interleukin 5 receptor subunit alpha	protein-coding	54.41	9.71	5.603501545	3.95E-18
chr3-83	chr3	127124311	127125574	+	27.5	1263	Intergenic	Intergenic	-15429	NR_110147	101927123	Hs.526761	NR_110147	ENSG00000244215	LINC02016	-	long intergenic non-protein coding RNA 2016	ncRNA	27.52	5.82	4.728522337	1.71E-08
chr3-830	chr3	10508720	10510430	+	28.8	1710	"intron (NM_001330611, intron 1 of 21)"	MIRb|SINE|MIR	37693	NM_001001331	491	Hs.268942	NM_001683	ENSG00000157087	ATP2B2	PMCA2|PMCA2a|PMCA2i	ATPase plasma membrane Ca2+ transporting 2	protein-coding	28.8	3.4	8.470588235	1.50E-13
chr3-831	chr3	10612838	10613838	+	16	1000	Intergenic	Intergenic	55154	NR_046766	100874325	Hs.143004	NR_046766	ENSG00000224771	ATP2B2-IT2	-	ATP2B2 intronic transcript 2	ncRNA	16	2.43	6.58436214	7.90E-07
chr3-833	chr3	10657028	10660163	+	47.4	3135	Intergenic	L1ME4a|LINE|L1	9897	NR_046766	100874325	Hs.143004	NR_046766	ENSG00000224771	ATP2B2-IT2	-	ATP2B2 intronic transcript 2	ncRNA	47.37	10.68	4.435393258	2.70E-13
chr3-836	chr3	11235373	11236633	+	19.2	1260	"intron (NM_001098212, intron 1 of 1)"	MIRb|SINE|MIR	-31666	NM_001098211	3269	Hs.1570	NM_000861	ENSG00000196639	HRH1	H1-R|H1R|HH1R|hisH1	histamine receptor H1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr3-838	chr3	12454533	12455533	+	16	1000	"intron (NM_001330615, intron 5 of 5)"	AluSq2|SINE|Alu	62032	NM_015869	5468	Hs.162646	NM_005037	ENSG00000132170	PPARG	CIMT1|GLM1|NR1C3|PPARG1|PPARG2|PPARgamma	peroxisome proliferator activated receptor gamma	protein-coding	16	3.4	4.705882353	2.25E-05
chr3-839	chr3	12475038	12476038	+	16	1000	"exon (NM_005037, exon 7 of 7)"	"exon (NM_005037, exon 7 of 7)"	-50393	NM_001321278	80746	Hs.335550	NM_025265	ENSG00000154743	TSEN2	PCH2B|SEN2|SEN2L	tRNA splicing endonuclease subunit 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr3-840	chr3	13696199	13698238	+	34.6	2039	"intron (NR_027103, intron 1 of 5)"	"intron (NR_027103, intron 1 of 5)"	4997	NR_027103	285375	Hs.319969	NR_027103	ENSG00000224514	LINC00620	-	long intergenic non-protein coding RNA 620	ncRNA	34.56	2.43	14.22222222	4.68E-22
chr3-842	chr3	13825330	13827567	+	33.9	2237	Intergenic	Intergenic	95170	NM_004625	7476	Hs.72290	NM_004625	ENSG00000154764	WNT7A	-	Wnt family member 7A	protein-coding	33.92	6.31	5.375594295	2.25E-11
chr3-845	chr3	14593586	14594586	+	16	1000	Intergenic	Intergenic	-12236	NM_001080423	80852	Hs.517819	NM_001080423	ENSG00000144596	GRIP2	-	glutamate receptor interacting protein 2	protein-coding	16	1.46	10.95890411	3.44E-09
chr3-846	chr3	14855271	14856271	+	17.3	1000	Intergenic	Intergenic	-2850	NR_135245	152274	Hs.434128	NR_135245	ENSG00000260902	LINC02011	-	long intergenic non-protein coding RNA 2011	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr3-848	chr3	14859126	14860725	+	25.6	1599	promoter-TSS (NM_001320276)	promoter-TSS (NM_001320276)	-544	NM_152536	152273	Hs.412406	NM_152536	ENSG00000154783	FGD5	ZFYVE23	"FYVE, RhoGEF and PH domain containing 5"	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr3-857	chr3	27754033	27757251	+	63.4	3218	Intergenic	Intergenic	8564	NM_001278182	8320	Hs.591663	NM_005442	ENSG00000163508	EOMES	TBR2	eomesodermin	protein-coding	63.37	10.68	5.933520599	6.50E-22
chr3-859	chr3	32315910	32316910	+	16.6	1000	"intron (NM_001320308, intron 1 of 2)"	L1MC4|LINE|L1	36239	NM_001320308	152189	Hs.154986	NM_178868	ENSG00000170293	CMTM8	CKLFSF8|CKLFSF8-V2	CKLF like MARVEL transmembrane domain containing 8	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr3-869	chr3	37779536	37780910	+	22.4	1374	"intron (NM_002207, intron 20 of 27)"	"intron (NM_002207, intron 20 of 27)"	123048	NR_110532	101928153	Hs.657314	NR_110531	ENSG00000235257	ITGA9-AS1	-	ITGA9 antisense RNA 1	ncRNA	22.4	3.88	5.773195876	2.53E-08
chr3-878	chr3	43954469	43955469	+	16.6	1000	Intergenic	MIRb|SINE|MIR	-200735	NR_029700	406929		NR_029700	ENSG00000207954	MIR138-1	MIRN138-1|mir-138-1	microRNA 138-1	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr3-881	chr3	45126067	45127612	+	21.8	1545	"3' UTR (NM_022842, exon 9 of 9)"	"3' UTR (NM_022842, exon 9 of 9)"	55217	NM_001308394	7123	Hs.476092	NM_003278	ENSG00000163815	CLEC3B	TN|TNA	C-type lectin domain family 3 member B	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr3-883	chr3	45235367	45238400	+	42.2	3033	Intergenic	(TTCC)n|Simple_repeat|Simple_repeat	30931	NM_015444	25907	Hs.740403	NM_015444	ENSG00000249992	TMEM158	BBP|RIS1|p40BBP	transmembrane protein 158 (gene/pseudogene)	protein-coding	42.25	4.85	8.711340206	3.69E-20
chr3-886	chr3	46300768	46303197	+	35.8	2429	"intron (NM_178329, intron 1 of 1)"	THE1B-int|LTR|ERVL-MaLR	18110	NM_001164680	1232	Hs.506190	NM_001837	ENSG00000183625	CCR3	CC-CKR-3|CD193|CKR3|CMKBR3	C-C motif chemokine receptor 3	protein-coding	35.84	6.8	5.270588235	3.95E-12
chr3-89	chr3	184318416	184319676	+	25.6	1260	Intergenic	Intergenic	39459	NM_004443	2049	Hs.2913	NM_004443	ENSG00000182580	EPHB3	EK2|ETK2|HEK2|TYRO6	EPH receptor B3	protein-coding	25.6	5.82	4.39862543	7.99E-08
chr3-890	chr3	46742495	46743897	+	22.4	1402	"intron (NM_147196, intron 1 of 3)"	"intron (NM_147196, intron 1 of 3)"	373	NM_147196	259236	Hs.185777	NM_147196	ENSG00000181585	TMIE	DFNB6	transmembrane inner ear	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr3-891	chr3	46933742	46934742	+	16	1000	"intron (NM_001184744, intron 2 of 14)"	CpG	10503	NM_001184744	5745	Hs.1019	NM_000316	ENSG00000160801	PTH1R	PFE|PTHR|PTHR1	parathyroid hormone 1 receptor	protein-coding	16	0	16.4818808	1.26E-14
chr3-895	chr3	50475215	50476470	+	19.8	1255	"intron (NM_001005505, intron 2 of 37)"	"intron (NM_001005505, intron 2 of 37)"	65186	NM_001174051	9254	Hs.476273	NM_006030	ENSG00000007402	CACNA2D2	CACNA2D	calcium voltage-gated channel auxiliary subunit alpha2delta 2	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr3-896	chr3	50494669	50495932	+	19.2	1263	"intron (NM_001005505, intron 2 of 37)"	"intron (NM_001005505, intron 2 of 37)"	45728	NM_001174051	9254	Hs.476273	NM_006030	ENSG00000007402	CACNA2D2	CACNA2D	calcium voltage-gated channel auxiliary subunit alpha2delta 2	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr3-902	chr3	50711306	50715075	+	55.7	3769	TTS (NR_039950)	TTS (NR_039950)	518	NM_004947	1795	Hs.476284	NM_004947	ENSG00000088538	DOCK3	MOCA|PBP	dedicator of cytokinesis 3	protein-coding	55.69	11.16	4.990143369	9.34E-17
chr3-905	chr3	53181955	53184104	+	32.6	2149	Intergenic	AluSz6|SINE|Alu	-12194	NM_212539	5580	Hs.155342	NM_006254	ENSG00000163932	PRKCD	ALPS3|CVID9|MAY1|PKCD|nPKC-delta	protein kinase C delta	protein-coding	32.64	4.37	7.469107551	5.18E-14
chr3-909	chr3	53592097	53593097	+	16	1000	"intron (NM_001128840, intron 3 of 47)"	L1MEf|LINE|L1	63521	NM_000720	776	Hs.476358	NM_000720	ENSG00000157388	CACNA1D	CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD	calcium voltage-gated channel subunit alpha1 D	protein-coding	16	2.91	5.498281787	4.98E-06
chr3-911	chr3	53682016	53683016	+	17.3	1000	"intron (NM_001128840, intron 3 of 47)"	"intron (NM_001128840, intron 3 of 47)"	153440	NM_000720	776	Hs.476358	NM_000720	ENSG00000157388	CACNA1D	CACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDD	calcium voltage-gated channel subunit alpha1 D	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr3-919	chr3	57177062	57178409	+	17.3	1347	"intron (NM_001318864, intron 2 of 13)"	"intron (NM_001318864, intron 2 of 13)"	21692	NM_017563	54756	Hs.150725	NM_017563	ENSG00000144730	IL17RD	HH18|IL-17RD|IL17RLM|SEF	interleukin 17 receptor D	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr3-920	chr3	59644169	59645420	+	20.5	1251	Intergenic	Intergenic	422059	NM_001320901	2272	Hs.655995	NM_002012	ENSG00000189283	FHIT	AP3Aase|FRA3B	fragile histidine triad	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr3-923	chr3	69019491	69020491	+	16.6	1000	Intergenic	Intergenic	-38230	NM_182522	151647	Hs.187873	NM_182522	ENSG00000163377	FAM19A4	TAFA-4|TAFA4	"family with sequence similarity 19 member A4, C-C motif chemokine like"	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr3-931	chr3	73520402	73521920	+	23	1518	"intron (NM_015009, intron 3 of 9)"	"intron (NM_015009, intron 3 of 9)"	2622	NM_001303141	23024	Hs.660347	NM_015009	ENSG00000121440	PDZRN3	LNX3|SEMACAP3|SEMCAP3	PDZ domain containing ring finger 3	protein-coding	23.04	4.37	5.272311213	2.46E-08
chr3-935	chr3	99419837	99420837	+	16.6	1000	"intron (NM_001850, intron 2 of 4)"	"intron (NM_001850, intron 2 of 4)"	62897	NM_001850	1295	Hs.654548	NM_001850	ENSG00000144810	COL8A1	C3orf7	collagen type VIII alpha 1 chain	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr3-936	chr3	99946090	99947385	+	21.1	1295	Intergenic	Intergenic	-32924	NM_018309	55773	Hs.477003	NM_018309	ENSG00000036054	TBC1D23	NS4ATP1	TBC1 domain family member 23	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr3-941	chr3	121836603	121837603	+	16.6	1000	"intron (NM_175862, intron 6 of 6)"	"intron (NM_175862, intron 6 of 6)"	40407	NM_176892	942	Hs.171182	NM_006889	ENSG00000114013	CD86	B7-2|B7.2|B70|CD28LG2|LAB72	CD86 molecule	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr3-943	chr3	122647108	122648631	+	21.1	1523	"exon (NM_001256348, exon 5 of 22)"	"exon (NM_001256348, exon 5 of 22)"	42509	NR_024618	100129550	Hs.61558	NR_024618	ENSG00000273033	LINC02035	-	long intergenic non-protein coding RNA 2035	ncRNA	21.12	4.85	4.354639175	2.52E-06
chr3-948	chr3	123181919	123182919	+	17.3	1000	Intergenic	Intergenic	-15027	NM_183357	111	Hs.593292	NM_183357	ENSG00000173175	ADCY5	AC5|FDFM	adenylate cyclase 5	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr3-950	chr3	123408674	123410493	+	27.5	1819	"intron (NR_046629, intron 1 of 2)"	"intron (NR_046629, intron 1 of 2)"	1092	NR_046629	100873940	Hs.667316	NR_046629	ENSG00000250174	MYLK-AS2	-	MYLK antisense RNA 2	ncRNA	27.52	4.37	6.297482838	1.19E-10
chr3-954	chr3	124233210	124234210	+	16.6	1000	"intron (NM_001024660, intron 33 of 59)"	"intron (NM_001024660, intron 33 of 59)"	-69796	NM_001322993	8997	Hs.8004	NM_003947	ENSG00000160145	KALRN	ARHGEF24|CHD5|CHDS5|DUET|DUO|HAPIP|TRAD	"kalirin, RhoGEF kinase"	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr3-955	chr3	124437933	124438933	+	15.4	1000	"3' UTR (NM_007064, exon 27 of 27)"	"3' UTR (NM_007064, exon 27 of 27)"	-10780	NM_000373	7372	Hs.2057	NM_000373	ENSG00000114491	UMPS	OPRT	uridine monophosphate synthetase	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr3-957	chr3	124560010	124561010	+	16.6	1000	"intron (NM_002213, intron 4 of 14)"	L2b|LINE|L2	45642	NM_002213	3693	Hs.13155	NM_002213	ENSG00000082781	ITGB5	-	integrin subunit beta 5	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr3-960	chr3	125918856	125919856	+	15.4	1000	"intron (NR_046383, intron 1 of 1)"	MER57C2|LTR|ERV1	-19327	NM_001270364	10840	Hs.434435	NM_012190	ENSG00000144908	ALDH1L1	10-FTHFDH|10-fTHF|FDH|FTHFD	aldehyde dehydrogenase 1 family member L1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr3-962	chr3	126038554	126039554	+	17.3	1000	Intergenic	MER102c|DNA|hAT-Charlie	37182	NM_014079	28999	Hs.272215	NM_014079	ENSG00000163884	KLF15	KKLF	Kruppel like factor 15	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr3-965	chr3	127129593	127130593	+	16.6	1000	Intergenic	Intergenic	-20580	NR_110147	101927123	Hs.526761	NR_110147	ENSG00000244215	LINC02016	-	long intergenic non-protein coding RNA 2016	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr3-970	chr3	127532945	127533945	+	16	1000	"intron (NM_001003794, intron 2 of 7)"	"intron (NM_001003794, intron 2 of 7)"	8280	NM_007283	11343	Hs.277035	NM_007283	ENSG00000074416	MGLL	HU-K5|HUK5|MAGL|MGL	monoglyceride lipase	protein-coding	16	0.97	16.49484536	3.54E-11
chr3-972	chr3	127562527	127563527	+	16	1000	Intergenic	AluSx1|SINE|Alu	-20934	NM_001003794	11343	Hs.277035	NM_007283	ENSG00000074416	MGLL	HU-K5|HUK5|MAGL|MGL	monoglyceride lipase	protein-coding	16	1.94	8.24742268	7.67E-08
chr3-975	chr3	128152704	128153704	+	16	1000	Intergenic	Intergenic	-29233	NR_037890	285224	Hs.683815	NR_037890	ENSG00000242049	DNAJB8-AS1	-	DNAJB8 antisense RNA 1	ncRNA	16	3.4	4.705882353	2.25E-05
chr3-984	chr3	133668975	133669975	+	16	1000	"intron (NM_005630, intron 6 of 13)"	"intron (NM_005630, intron 6 of 13)"	-20819	NM_025041	80111	Hs.287691	NM_025041	ENSG00000221972	C3orf36	-	chromosome 3 open reading frame 36	protein-coding	16	2.43	6.58436214	7.90E-07
chr3-988	chr3	134173244	134174547	+	19.8	1303	Intergenic	Intergenic	17226	NR_039951	100616281		NR_039951		MIR4788	-	microRNA 4788	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr3-998	chr3	140431730	140433039	+	20.5	1309	Intergenic	AluSz6|SINE|Alu	35518	NM_152616	287015	Hs.343487	NM_152616	ENSG00000155890	TRIM42	PPP1R40|T4A1	tripartite motif containing 42	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr3-999	chr3	140765796	140767631	+	26.9	1835	Intergenic	L2c|LINE|L2	-3531	NM_080862	92369	Hs.655112	NM_080862	ENSG00000175093	SPSB4	SSB-4|SSB4	splA/ryanodine receptor domain and SOCS box containing 4	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr4-1001	chr4	37472276	37473751	+	22.4	1475	"intron (NM_001104629, intron 1 of 3)"	MER57D|LTR|ERV1	17461	NM_001104629	55286	Hs.107527	NM_018302	ENSG00000154274	C4orf19	-	chromosome 4 open reading frame 19	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr4-1003	chr4	38384577	38385577	+	16	1000	Intergenic	MIRc|SINE|MIR	139724	NR_110951	101928776	Hs.586147	NR_110951	ENSG00000249534	LINC01258	-	long intergenic non-protein coding RNA 1258	ncRNA	16	3.4	4.705882353	2.25E-05
chr4-1006	chr4	40560206	40561206	+	15.4	1000	"intron (NM_001098634, intron 1 of 6)"	AluSx1|SINE|Alu	-42716	NM_019027	54502	Hs.518727	NM_019027	ENSG00000163694	RBM47	NET18	RNA binding motif protein 47	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr4-1007	chr4	40852013	40853656	+	23	1643	"intron (NM_001166051, intron 1 of 6)"	AluJb|SINE|Alu	6338	NM_001166051	323	Hs.479602	NM_004307	ENSG00000163697	APBB2	FE65L|FE65L1	amyloid beta precursor protein binding family B member 2	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr4-1009	chr4	40875859	40876859	+	14.7	1000	"intron (NM_001166050, intron 12 of 17)"	L4|LINE|RTE	-17150	NM_001166053	323	Hs.479602	NM_004307	ENSG00000163697	APBB2	FE65L|FE65L1	amyloid beta precursor protein binding family B member 2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr4-1012	chr4	41215493	41217720	+	32	2227	promoter-TSS (NM_004307)	promoter-TSS (NM_004307)	29	NM_001166050	323	Hs.479602	NM_004307	ENSG00000163697	APBB2	FE65L|FE65L1	amyloid beta precursor protein binding family B member 2	protein-coding	32	2.91	10.99656357	6.10E-18
chr4-1013	chr4	41262667	41263667	+	16	1000	"intron (NM_004181, intron 4 of 8)"	"intron (NM_004181, intron 4 of 8)"	4269	NM_004181	7345	Hs.518731	NM_004181	ENSG00000154277	UCHL1	HEL-117|HEL-S-53|NDGOA|PARK5|PGP 9.5|PGP9.5|PGP95|Uch-L1	ubiquitin C-terminal hydrolase L1	protein-coding	16	1.94	8.24742268	7.67E-08
chr4-1014	chr4	41733933	41734933	+	14.7	1000	Intergenic	Intergenic	16554	NM_003924	8929	Hs.87202	NM_003924	ENSG00000109132	PHOX2B	NBLST2|NBPhox|PMX2B	paired like homeobox 2b	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr4-1023	chr4	55522289	55525687	+	58.2	3398	promoter-TSS (NM_000222)	promoter-TSS (NM_000222)	-107	NM_000222	3815	Hs.479754	NM_000222	ENSG00000157404	KIT	C-Kit|CD117|PBT|SCFR	KIT proto-oncogene receptor tyrosine kinase	protein-coding	58.25	7.28	8.001373626	3.02E-25
chr4-1025	chr4	55945986	55947893	+	27.5	1907	"intron (NM_002253, intron 29 of 29)"	"intron (NM_002253, intron 29 of 29)"	44823	NM_002253	3791	Hs.479756	NM_002253	ENSG00000128052	KDR	CD309|FLK1|VEGFR|VEGFR2	kinase insert domain receptor	protein-coding	27.52	4.37	6.297482838	1.19E-10
chr4-1027	chr4	57686184	57687184	+	16	1000	"intron (NM_001271721, intron 1 of 2)"	"intron (NM_001271721, intron 1 of 2)"	955	NR_073417	6691	Hs.98243	NM_021114	ENSG00000128040	SPINK2	HUSI-II	"serine peptidase inhibitor, Kazal type 2"	protein-coding	16	3.4	4.705882353	2.25E-05
chr4-1030	chr4	77265017	77266017	+	14.1	1000	"intron (NM_001042784, intron 17 of 23)"	L1PA7|LINE|L1	38338	NM_003943	8987	Hs.109590	NM_003943	ENSG00000118804	STBD1	GENEX3414|GENX-3414	starch binding domain 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr4-1031	chr4	77680605	77681928	+	23	1323	"intron (NM_020859, intron 9 of 10)"	"intron (NM_020859, intron 9 of 10)"	137736	NM_001029870	345079	Hs.257292	NM_001029870	ENSG00000186212	SOWAHB	ANKRD56	sosondowah ankyrin repeat domain family member B	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr4-1035	chr4	83480599	83481599	+	15.4	1000	"intron (NM_001080506, intron 1 of 7)"	"intron (NM_001080506, intron 1 of 7)"	2027	NM_001080506	441027	Hs.507676	NM_001080506	ENSG00000249242	TMEM150C	TTN3	transmembrane protein 150C	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr4-1042	chr4	90221772	90223081	+	18.6	1309	"intron (NM_198281, intron 1 of 1)"	"intron (NM_198281, intron 1 of 1)"	6735	NM_198281	285513	Hs.100912	NM_198281	ENSG00000185477	GPRIN3	GRIN3	GPRIN family member 3	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr4-1043	chr4	94750107	94751597	+	20.5	1490	"exon (NM_005172, exon 1 of 1)"	"exon (NM_005172, exon 1 of 1)"	774	NM_005172	474	Hs.532680	NM_005172	ENSG00000172238	ATOH1	ATH1|HATH1|MATH-1|bHLHa14	atonal bHLH transcription factor 1	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr4-1045	chr4	108704698	108706141	+	19.2	1443	Intergenic	Intergenic	-40302	NM_001136258	166929	Hs.595423	NM_152621	ENSG00000164023	SGMS2	SMS2	sphingomyelin synthase 2	protein-coding	19.2	1.46	13.15068493	1.82E-12
chr4-1046	chr4	111546548	111549363	+	56.3	2815	"intron (NM_153427, intron 3 of 4)"	"intron (NM_153427, intron 3 of 4)"	-3701	NM_000325	5308	Hs.643588	NM_000325	ENSG00000164093	PITX2	ARP1|Brx1|IDG2|IGDS|IGDS2|IHG2|IRID2|Otlx2|PTX2|RGS|RIEG|RIEG1|RS	paired like homeodomain 2	protein-coding	56.33	8.74	6.445080092	2.41E-21
chr4-1051	chr4	119905885	119906885	+	15.4	1000	"intron (NM_001128933, intron 1 of 3)"	"intron (NM_001128933, intron 1 of 3)"	96389	NM_001128934	171024	Hs.655519	NM_133477	ENSG00000172403	SYNPO2	-	synaptopodin 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr4-1052	chr4	120248775	120249775	+	15.4	1000	Intergenic	Intergenic	-5959	NM_000134	2169	Hs.282265	NM_000134	ENSG00000145384	FABP2	FABPI|I-FABP	fatty acid binding protein 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr4-1053	chr4	121928487	121929487	+	16	1000	Intergenic	Intergenic	64686	NM_024574	79625	Hs.709520	NM_024574	ENSG00000173376	NDNF	C4orf31|NORD	neuron derived neurotrophic factor	protein-coding	16	2.91	5.498281787	4.98E-06
chr4-1055	chr4	122619817	122621191	+	20.5	1374	Intergenic	Intergenic	-2357	NM_001154	308	Hs.480653	NM_001154	ENSG00000164111	ANXA5	ANX5|ENX2|HEL-S-7|PP4|RPRGL3	annexin A5	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr4-1075	chr4	156679250	156681449	+	32	2199	"intron (NM_001291955, intron 1 of 12)"	CpG	224	NM_001291954	2983	Hs.77890	NM_000857	ENSG00000061918	GUCY1B3	GC-S-beta-1|GC-SB3|GUC1B3|GUCB3|GUCSB3|GUCY1B1	guanylate cyclase 1 soluble subunit beta	protein-coding	32	1.94	16.49484536	5.00E-22
chr4-1077	chr4	158929942	158930942	+	15.4	1000	Intergenic	Intergenic	163276	NM_016613	51313	Hs.567498	NM_016613	ENSG00000164125	FAM198B	AD021|AD036|C4orf18|ENED	family with sequence similarity 198 member B	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr4-1078	chr4	166310640	166311934	+	16.6	1294	"intron (NM_001873, intron 1 of 8)"	L2c|LINE|L2	3893	NR_030304	693163		NR_030304	ENSG00000207559	MIR578	MIRN578|hsa-mir-578	microRNA 578	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr4-1081	chr4	170948658	170949658	+	15.4	1000	Intergenic	Intergenic	-1577	NM_001301647	9848	Hs.593942	NM_021647	ENSG00000198948	MFAP3L	NYD-sp9	microfibrillar associated protein 3 like	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr4-1083	chr4	174437775	174438775	+	16	1000	"intron (NM_001329597, intron 1 of 3)"	CpG	2114	NM_001329597	11341	Hs.7122	NM_007281	ENSG00000164106	SCRG1	SCRG-1	stimulator of chondrogenesis 1	protein-coding	16	1.46	10.95890411	3.44E-09
chr4-1084	chr4	174453953	174454953	+	16	1000	"intron (NR_136196, intron 2 of 4)"	"intron (NR_136196, intron 2 of 4)"	2844	NR_003679	79804	Hs.61435	NR_003679	ENSG00000237125	HAND2-AS1	DEIN|NBLA00301|UPH	HAND2 antisense RNA 1 (head to head)	ncRNA	16	3.88	4.12371134	7.91E-05
chr4-1088	chr4	174867688	174868688	+	16	1000	Intergenic	Intergenic	273361	NR_125896	101928509	Hs.147719	NR_125896	ENSG00000248174	LOC101928509	-	uncharacterized LOC101928509	ncRNA	16	0.97	16.49484536	3.54E-11
chr4-1092	chr4	183274834	183275834	+	14.7	1000	"intron (NM_001080477, intron 3 of 27)"	"intron (NM_001080477, intron 3 of 27)"	110750	NM_001080477	55714	Hs.130438	NM_001080477	ENSG00000218336	TENM3	MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3	teneurin transmembrane protein 3	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr4-1094	chr4	183616076	183617076	+	16.6	1000	"intron (NM_001080477, intron 12 of 27)"	Arthur1|DNA|hAT-Tip100	222054	NM_001921	1635	Hs.183850	NM_001921	ENSG00000129187	DCTD	-	dCMP deaminase	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr4-1098	chr4	184999105	185000105	+	15.4	1000	Intergenic	Intergenic	139509	NM_153343	133121	Hs.297814	NM_153343	ENSG00000164303	ENPP6	NPP6	ectonucleotide pyrophosphatase/phosphodiesterase 6	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr4-1109	chr4	188157526	188158526	+	16	1000	Intergenic	Intergenic	268741	NR_038931	339975	Hs.639361	NR_038931		LOC339975	-	uncharacterized LOC339975	ncRNA	16	3.88	4.12371134	7.91E-05
chr4-1114	chr4	1038395	1039395	+	15.4	1000	Intergenic	Intergenic	32643	NM_021923	53834	Hs.193326	NM_021923	ENSG00000127418	FGFRL1	FGFR5|FHFR	fibroblast growth factor receptor-like 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr4-1121	chr4	1542955	1543955	+	15.4	1000	Intergenic	Intergenic	142263	NM_001013622	152877	Hs.143314	NM_001013622	ENSG00000174137	FAM53A	DNTNP	family with sequence similarity 53 member A	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr4-1123	chr4	1642650	1644317	+	23.7	1667	"intron (NM_001174070, intron 4 of 4)"	"intron (NM_001174070, intron 4 of 4)"	42235	NM_001013622	152877	Hs.143314	NM_001013622	ENSG00000174137	FAM53A	DNTNP	family with sequence similarity 53 member A	protein-coding	23.68	3.4	6.964705882	5.45E-10
chr4-1125	chr4	2086185	2087185	+	15.4	1000	"intron (NM_181808, intron 21 of 25)"	L1MEb|LINE|L1	25446	NM_178557	339983	Hs.318529	NM_178557	ENSG00000185818	NAT8L	CML3|NACED|NAT8-LIKE	N-acetyltransferase 8 like	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr4-1129	chr4	2374740	2376554	+	28.2	1814	"intron (NM_001172657, intron 1 of 6)"	"intron (NM_001172657, intron 1 of 6)"	-9043	NM_001172659	57732	Hs.292056	NM_020972	ENSG00000159733	ZFYVE28	LST2|LYST2	zinc finger FYVE-type containing 28	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr4-1138	chr4	3287727	3294251	+	81.9	6524	Intergenic	AluJb|SINE|Alu	-24885	NM_198229	6002	Hs.527061	NM_002926	ENSG00000159788	RGS12	-	regulator of G-protein signaling 12	protein-coding	81.93	16.02	5.11423221	6.09E-25
chr4-1140	chr4	3371826	3375123	+	62.7	3297	"intron (NM_198227, intron 1 of 15)"	"intron (NM_198227, intron 1 of 15)"	1750	NM_198227	6002	Hs.527061	NM_002926	ENSG00000159788	RGS12	-	regulator of G-protein signaling 12	protein-coding	62.73	6.8	9.225	3.03E-30
chr4-1147	chr4	3750047	3754827	+	71	4780	Intergenic	Intergenic	-15859	NM_000683	152	Hs.123022	NM_000683	ENSG00000184160	ADRA2C	ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR	adrenoceptor alpha 2C	protein-coding	71.05	8.74	8.129290618	7.31E-31
chr4-1148	chr4	3827234	3828234	+	14.7	1000	Intergenic	Intergenic	59438	NM_000683	152	Hs.123022	NM_000683	ENSG00000184160	ADRA2C	ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR	adrenoceptor alpha 2C	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr4-1150	chr4	3878710	3882211	+	62.1	3501	Intergenic	Intergenic	76695	NR_130742	348926	Hs.591720	NR_024253	ENSG00000251669	FAM86EP	-	"family with sequence similarity 86, member A pseudogene"	pseudo	62.09	10.68	5.813670412	3.83E-21
chr4-1153	chr4	4885341	4886341	+	14.1	1000	Intergenic	AluJo|SINE|Alu	24449	NM_002448	4487	Hs.424414	NM_002448	ENSG00000163132	MSX1	ECTD3|HOX7|HYD1|STHAG1	msh homeobox 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr4-1155	chr4	5656315	5657315	+	14.7	1000	"intron (NM_001166136, intron 9 of 21)"	"intron (NM_001166136, intron 9 of 21)"	53479	NM_147127	132884	Hs.87306	NM_147127	ENSG00000173040	EVC2	LBN|WAD	EvC ciliary complex subunit 2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr4-1160	chr4	5689156	5690156	+	14.7	1000	"intron (NM_001166136, intron 5 of 21)"	MIRb|SINE|MIR	20638	NM_147127	132884	Hs.87306	NM_147127	ENSG00000173040	EVC2	LBN|WAD	EvC ciliary complex subunit 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr4-1161	chr4	5734436	5735436	+	13.4	1000	"intron (NM_001306092, intron 4 of 11)"	"intron (NM_001306092, intron 4 of 11)"	22012	NM_001306090	2121	Hs.646899	NM_014556	ENSG00000072840	EVC	DWF-1|EVC1|EVCL	EvC ciliary complex subunit 1	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr4-1163	chr4	5801554	5802554	+	13.4	1000	"intron (NM_153717, intron 15 of 20)"	AluSz|SINE|Alu	87486	NM_001288662	1400	Hs.135270	NM_001313	ENSG00000072832	CRMP1	CRMP-1|DPYSL1|DRP-1|DRP1|ULIP-3	collapsin response mediator protein 1	protein-coding	13.44	0	13.84477987	1.16E-11
chr4-1165	chr4	5920388	5921860	+	22.4	1472	Intergenic	Intergenic	3931	NR_039608	100616201		NR_039608	ENSG00000263631	MIR378D1	mir-378d-1	microRNA 378d-1	ncRNA	22.4	1.46	15.34246575	8.59E-15
chr4-1168	chr4	5962499	5963499	+	14.1	1000	Intergenic	AluSx|SINE|Alu	-37944	NR_039608	100616201		NR_039608	ENSG00000263631	MIR378D1	mir-378d-1	microRNA 378d-1	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr4-1169	chr4	5977641	5978641	+	14.7	1000	Intergenic	AluY|SINE|Alu	-53086	NR_039608	100616201		NR_039608	ENSG00000263631	MIR378D1	mir-378d-1	microRNA 378d-1	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr4-1171	chr4	6029362	6033096	+	55	3734	"intron (NM_001099433, intron 20 of 20)"	"intron (NM_001099433, intron 20 of 20)"	-106174	NR_039608	100616201		NR_039608	ENSG00000263631	MIR378D1	mir-378d-1	microRNA 378d-1	ncRNA	55.05	8.25	6.672727273	1.93E-21
chr4-1173	chr4	6367503	6368503	+	14.7	1000	"intron (NM_020416, intron 5 of 8)"	MIRb|SINE|MIR	15594	NM_181876	5522	Hs.479069	NM_020416	ENSG00000074211	PPP2R2C	B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G	protein phosphatase 2 regulatory subunit Bgamma	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr4-1175	chr4	6403618	6405255	+	26.9	1637	"intron (NM_001206995, intron 2 of 9)"	L2b|LINE|L2	18409	NM_001206996	5522	Hs.479069	NM_020416	ENSG00000074211	PPP2R2C	B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G	protein phosphatase 2 regulatory subunit Bgamma	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr4-1176	chr4	6424177	6425177	+	15.4	1000	"intron (NM_001206995, intron 2 of 9)"	"intron (NM_001206995, intron 2 of 9)"	-1832	NM_001206996	5522	Hs.479069	NM_020416	ENSG00000074211	PPP2R2C	B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G	protein phosphatase 2 regulatory subunit Bgamma	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr4-1177	chr4	6429075	6430075	+	14.7	1000	"intron (NM_001206995, intron 2 of 9)"	"intron (NM_001206995, intron 2 of 9)"	-6730	NM_001206996	5522	Hs.479069	NM_020416	ENSG00000074211	PPP2R2C	B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G	protein phosphatase 2 regulatory subunit Bgamma	protein-coding	14.72	0	15.16333034	3.99E-13
chr4-1184	chr4	7146008	7147596	+	29.4	1588	Intergenic	Intergenic	-41699	NR_027441	730971	Hs.591718	NR_027441		FLJ36777	-	uncharacterized LOC730971	ncRNA	29.44	5.82	5.058419244	6.85E-10
chr4-1185	chr4	7163318	7165544	+	43.5	2226	Intergenic	Intergenic	-29943	NM_020777	57537	Hs.479099	NM_020777	ENSG00000184985	SORCS2	-	sortilin related VPS10 domain containing receptor 2	protein-coding	43.53	3.88	11.21907216	4.33E-24
chr4-1187	chr4	7208445	7210415	+	35.2	1970	"intron (NM_020777, intron 1 of 26)"	"intron (NM_020777, intron 1 of 26)"	15056	NM_020777	57537	Hs.479099	NM_020777	ENSG00000184985	SORCS2	-	sortilin related VPS10 domain containing receptor 2	protein-coding	35.2	4.85	7.257731959	1.02E-14
chr4-1188	chr4	7268372	7270922	+	38.4	2550	"intron (NM_020777, intron 1 of 26)"	"intron (NM_020777, intron 1 of 26)"	-42530	NR_039961	100616471		NR_039961	ENSG00000264658	MIR4798	-	microRNA 4798	ncRNA	38.4	1.94	19.79381443	2.32E-28
chr4-1190	chr4	7275335	7276335	+	14.7	1000	"intron (NM_020777, intron 1 of 26)"	"intron (NM_020777, intron 1 of 26)"	-36342	NR_039961	100616471		NR_039961	ENSG00000264658	MIR4798	-	microRNA 4798	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr4-1191	chr4	7300464	7303566	+	44.8	3102	"intron (NM_020777, intron 1 of 26)"	"intron (NM_020777, intron 1 of 26)"	-10162	NR_039961	100616471		NR_039961	ENSG00000264658	MIR4798	-	microRNA 4798	ncRNA	44.81	5.82	7.699312715	1.25E-19
chr4-1202	chr4	7406797	7407797	+	15.4	1000	"intron (NM_020777, intron 2 of 26)"	L1PB4|LINE|L1	29403	NM_001085382	768239	Hs.662523	NM_001085382	ENSG00000178597	PSAPL1	-	prosaposin-like 1 (gene/pseudogene)	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr4-1209	chr4	7683925	7689238	+	76.8	5313	"intron (NM_020777, intron 10 of 26)"	"intron (NM_020777, intron 10 of 26)"	-69236	NR_026892	84740	Hs.663029	NM_032654	ENSG00000272620	AFAP1-AS1	AFAP1-AS|AFAP1AS	AFAP1 antisense RNA 1	ncRNA	76.81	8.74	8.788329519	1.63E-35
chr4-1212	chr4	7808414	7809414	+	14.7	1000	"intron (NM_001134647, intron 9 of 17)"	"intron (NM_001134647, intron 9 of 17)"	53097	NR_026892	84740	Hs.663029	NM_032654	ENSG00000272620	AFAP1-AS1	AFAP1-AS|AFAP1AS	AFAP1 antisense RNA 1	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr4-1220	chr4	7986990	7987990	+	14.1	1000	"intron (NM_001130083, intron 17 of 20)"	"intron (NM_001130083, intron 17 of 20)"	19618	NR_029511	407052		NR_029511	ENSG00000207807	MIR95	MIRN95|hsa-mir-95|miR-95	microRNA 95	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr4-1221	chr4	8015545	8016545	+	15.4	1000	"intron (NM_001130086, intron 11 of 17)"	"intron (NM_001130086, intron 11 of 17)"	-8937	NR_029511	407052		NR_029511	ENSG00000207807	MIR95	MIRN95|hsa-mir-95|miR-95	microRNA 95	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr4-1226	chr4	8121883	8123254	+	20.5	1371	"intron (NM_001130083, intron 1 of 20)"	MER47A|DNA|TcMar-Tigger	37991	NM_001130083	84448	Hs.233404	NM_032432	ENSG00000163995	ABLIM2	-	actin binding LIM protein family member 2	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr4-1227	chr4	8126658	8127976	+	21.8	1318	"intron (NM_001130083, intron 1 of 20)"	"intron (NM_001130083, intron 1 of 20)"	33242	NM_001130083	84448	Hs.233404	NM_032432	ENSG00000163995	ABLIM2	-	actin binding LIM protein family member 2	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr4-1228	chr4	8264151	8265151	+	15.4	1000	Intergenic	Intergenic	-6841	NM_001297559	94031	Hs.479119	NM_053044	ENSG00000170801	HTRA3	Prsp|Tasp	HtrA serine peptidase 3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr4-1229	chr4	8267698	8270404	+	37.1	2706	Intergenic	Intergenic	-2441	NM_001297559	94031	Hs.479119	NM_053044	ENSG00000170801	HTRA3	Prsp|Tasp	HtrA serine peptidase 3	protein-coding	37.12	7.28	5.098901099	3.68E-12
chr4-1231	chr4	8288295	8289295	+	14.1	1000	"intron (NM_053044, intron 3 of 8)"	"intron (NM_053044, intron 3 of 8)"	17303	NM_053044	94031	Hs.479119	NM_053044	ENSG00000170801	HTRA3	Prsp|Tasp	HtrA serine peptidase 3	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr4-1234	chr4	8513499	8514499	+	15.4	1000	Intergenic	AluSx1|SINE|Alu	-67965	NR_045511	27201	Hs.740355	NM_080819	ENSG00000155269	GPR78	-	G protein-coupled receptor 78	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr4-1235	chr4	8645985	8646985	+	15.4	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	52098	NM_003652	8532	Hs.61995	NM_003652	ENSG00000109625	CPZ	-	carboxypeptidase Z	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr4-1236	chr4	8696239	8697239	+	12.8	1000	Intergenic	Intergenic	102352	NM_003652	8532	Hs.61995	NM_003652	ENSG00000109625	CPZ	-	carboxypeptidase Z	protein-coding	12.8	1.94	6.597938144	4.51E-06
chr4-1238	chr4	8890062	8891062	+	14.1	1000	Intergenic	Intergenic	-17019	NM_001306142	3166	Hs.104134	NM_018942	ENSG00000215612	HMX1	H6|NKX5-3	H6 family homeobox 1	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr4-1239	chr4	9807830	9808830	+	15.4	1000	Intergenic	Intergenic	25072	NM_000798	1816	Hs.380681	NM_000798	ENSG00000169676	DRD5	DBDR|DRD1B|DRD1L2	dopamine receptor D5	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr4-1243	chr4	10488676	10490849	+	40.3	2173	Intergenic	Intergenic	-30730	NM_053042	85460	Hs.455089	NM_053042	ENSG00000178163	ZNF518B	-	zinc finger protein 518B	protein-coding	40.33	7.77	5.19047619	6.49E-13
chr4-1248	chr4	13646610	13647610	+	15.4	1000	Intergenic	Intergenic	-9693	NR_121681	101929071	Hs.543714	NR_121681	ENSG00000250634	LINC01182	-	long intergenic non-protein coding RNA 1182	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr4-1250	chr4	15922331	15923331	+	14.7	1000	Intergenic	Intergenic	17532	NM_005130	9982	Hs.1690	NM_005130	ENSG00000137440	FGFBP1	FGF-BP|FGF-BP1|FGFBP|FGFBP-1|HBP17	fibroblast growth factor binding protein 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr4-1254	chr4	16081674	16084498	+	38.4	2824	"intron (NM_001145848, intron 1 of 26)"	L1P1|LINE|L1	2508	NM_001145847	8842	Hs.614734	NM_006017	ENSG00000007062	PROM1	AC133|CD133|CORD12|MCDR2|MSTP061|PROML1|RP41|STGD4	prominin 1	protein-coding	38.4	3.88	9.896907216	5.77E-20
chr4-1255	chr4	17324020	17325020	+	15.4	1000	Intergenic	Tigger4a|DNA|TcMar-Tigger	-136840	NR_125919	101929123	Hs.638913	NR_125919	ENSG00000250819	LOC101929123	-	uncharacterized LOC101929123	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr4-1256	chr4	17327545	17328884	+	23	1339	Intergenic	L1ME4a|LINE|L1	-140534	NR_125919	101929123	Hs.638913	NR_125919	ENSG00000250819	LOC101929123	-	uncharacterized LOC101929123	ncRNA	23.04	4.37	5.272311213	2.46E-08
chr4-1259	chr4	21880220	21881220	+	15.4	1000	"intron (NM_147182, intron 1 of 8)"	"intron (NM_147182, intron 1 of 8)"	-25909	NR_002813	359822	Hs.354058	NR_002813	ENSG00000280650	KCNIP4-IT1	NCRNA00099|UM9(5)|UM9-5	KCNIP4 intronic transcript 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr4-1263	chr4	25711120	25712120	+	14.7	1000	Intergenic	AluSz|SINE|Alu	53534	NM_001177999	10568	Hs.479372	NM_006424	ENSG00000157765	SLC34A2	NAPI-3B|NAPI-IIb|NPTIIb	solute carrier family 34 member 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr4-1265	chr4	25987872	25989126	+	17.9	1254	Intergenic	Intergenic	72685	NM_001145432	389203	Hs.479386	NM_001145432	ENSG00000250317	SMIM20	C4orf52|MITRAC7	small integral membrane protein 20	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr4-1271	chr4	38221386	38222386	+	14.7	1000	Intergenic	THE1D|LTR|ERVL-MaLR	100311	NM_001253915	23216	Hs.176503	NM_015173	ENSG00000065882	TBC1D1	TBC|TBC1	TBC1 domain family member 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr4-1272	chr4	38344640	38346389	+	25	1749	Intergenic	Intergenic	179287	NR_110951	101928776	Hs.586147	NR_110951	ENSG00000249534	LINC01258	-	long intergenic non-protein coding RNA 1258	ncRNA	24.96	3.4	7.341176471	7.55E-11
chr4-1273	chr4	38512755	38513755	+	14.7	1000	"intron (NR_110951, intron 1 of 7)"	AluSc5|SINE|Alu	11546	NR_110951	101928776	Hs.586147	NR_110951	ENSG00000249534	LINC01258	-	long intergenic non-protein coding RNA 1258	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr4-1284	chr4	52684771	52685771	+	14.7	1000	Intergenic	Intergenic	-23895	NM_001287757	23142	Hs.605388	NM_015115	ENSG00000109184	DCUN1D4	-	defective in cullin neddylation 1 domain containing 4	protein-coding	14.72	0	15.16333034	3.99E-13
chr4-1285	chr4	54959196	54961825	+	34.6	2629	Intergenic	MER5B|DNA|hAT-Charlie	-5738	NM_133267	170825	Hs.371899	NM_133267	ENSG00000180613	GSX2	GSH2	GS homeobox 2	protein-coding	34.56	7.77	4.447876448	3.74E-10
chr4-1288	chr4	69143534	69144534	+	14.7	1000	Intergenic	MER4C|LTR|ERV1	-32622	NM_182502	132724	Hs.407122	NM_182502	ENSG00000185873	TMPRSS11B	-	"transmembrane protease, serine 11B"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr4-1291	chr4	75718429	75719429	+	14.7	1000	"intron (NM_001729, intron 1 of 5)"	"intron (NM_001729, intron 1 of 5)"	967	NM_001729	685	Hs.591704	NM_001729	ENSG00000174808	BTC	-	betacellulin	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr4-1293	chr4	77556110	77557110	+	15.4	1000	"intron (NM_020859, intron 2 of 10)"	"intron (NM_020859, intron 2 of 10)"	59906	NR_039655	100616254		NR_039655	ENSG00000283682	MIR548AH	-	microRNA 548ah	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr4-1294	chr4	77585887	77586887	+	15.4	1000	"intron (NM_020859, intron 2 of 10)"	"intron (NM_020859, intron 2 of 10)"	89683	NR_039655	100616254		NR_039655	ENSG00000283682	MIR548AH	-	microRNA 548ah	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr4-1313	chr4	89272795	89273795	+	14.7	1000	Intergenic	LTR49|LTR|ERV1	-26596	NM_017912	55008	Hs.529317	NM_017912	ENSG00000138642	HERC6	-	HECT and RLD domain containing E3 ubiquitin protein ligase family member 6	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr4-1319	chr4	107955907	107959236	+	38.4	3329	promoter-TSS (NM_014421)	promoter-TSS (NM_014421)	-118	NM_014421	27123	Hs.211869	NM_014421	ENSG00000155011	DKK2	DKK-2	dickkopf WNT signaling pathway inhibitor 2	protein-coding	38.4	7.77	4.942084942	3.34E-12
chr4-1320	chr4	108744586	108746013	+	23	1427	promoter-TSS (NM_001136258)	promoter-TSS (NM_001136258)	-422	NM_001136258	166929	Hs.595423	NM_152621	ENSG00000164023	SGMS2	SMS2	sphingomyelin synthase 2	protein-coding	23.04	5.34	4.314606742	4.49E-07
chr4-1322	chr4	111562687	111563687	+	12.2	1000	promoter-TSS (NM_001204397)	promoter-TSS (NM_001204397)	92	NM_153427	5308	Hs.643588	NM_000325	ENSG00000164093	PITX2	ARP1|Brx1|IDG2|IGDS|IGDS2|IHG2|IRID2|Otlx2|PTX2|RGS|RIEG|RIEG1|RS	paired like homeodomain 2	protein-coding	12.16	0.97	12.53608247	1.07E-07
chr4-1331	chr4	120282757	120283757	+	15.4	1000	Intergenic	L2b|LINE|L2	-39941	NM_000134	2169	Hs.282265	NM_000134	ENSG00000145384	FABP2	FABPI|I-FABP	fatty acid binding protein 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr4-1334	chr4	122871553	122873680	+	32.6	2127	"intron (NM_001130698, intron 1 of 11)"	CpG	293	NM_001130698	7222	Hs.150981	NM_003305	ENSG00000138741	TRPC3	SCA41|TRP3	transient receptor potential cation channel subfamily C member 3	protein-coding	32.64	0	33.62303683	1.30E-36
chr4-1335	chr4	123495932	123497491	+	21.8	1559	Intergenic	L1MA3|LINE|L1	-43427	NR_104126	100996941	Hs.439487	NR_104126	ENSG00000227145	IL21-AS1	-	IL21 antisense RNA 1	ncRNA	21.76	2.43	8.95473251	2.49E-11
chr4-1339	chr4	123528662	123529662	+	15.4	1000	Intergenic	L2|LINE|L2	-10976	NR_104126	100996941	Hs.439487	NR_104126	ENSG00000227145	IL21-AS1	-	IL21 antisense RNA 1	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr4-134	chr4	21956717	21957717	+	23.7	1000	Intergenic	Intergenic	-6843	NM_147182	80333	Hs.655705	NM_025221	ENSG00000185774	KCNIP4	CALP|KCHIP4	potassium voltage-gated channel interacting protein 4	protein-coding	23.68	5.82	4.068728522	1.51E-06
chr4-1340	chr4	123590340	123591340	+	14.7	1000	"intron (NR_104126, intron 10 of 10)"	"intron (NR_104126, intron 10 of 10)"	-48628	NM_001207006	59067	Hs.567559	NM_021803	ENSG00000138684	IL21	CVID11|IL-21|Za11	interleukin 21	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr4-1341	chr4	123628689	123629689	+	14.7	1000	Intergenic	AluJb|SINE|Alu	24424	NR_024041	729338	Hs.647968	NR_024041		CETN4P	-	"centrin 4, pseudogene"	pseudo	14.72	1.94	7.587628866	6.14E-07
chr4-1344	chr4	139629517	139630517	+	14.7	1000	Intergenic	L2c|LINE|L2	303783	NR_133945	105377448	Hs.200280	NR_133945	ENSG00000250195	LOC105377448	-	uncharacterized LOC105377448	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr4-1346	chr4	140655149	140657380	+	40.3	2231	"intron (NM_018717, intron 3 of 5)"	CpG	69342	NM_002413	4258	Hs.81874	NM_002413	ENSG00000085871	MGST2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding	40.33	4.37	9.228832952	1.50E-19
chr4-1351	chr4	143766289	143768824	+	35.8	2535	"5' UTR (NM_001331040, exon 1 of 26)"	"5' UTR (NM_001331040, exon 1 of 26)"	132	NM_003866	8821	Hs.176376	NM_003866	ENSG00000109452	INPP4B	-	inositol polyphosphate-4-phosphatase type II B	protein-coding	35.84	4.85	7.389690722	1.37E-15
chr4-1354	chr4	147055349	147056349	+	15.4	1000	Intergenic	Intergenic	-12784	NR_038331	100505545	Hs.122199	NR_038331	ENSG00000248809	LINC01095	-	long intergenic non-protein coding RNA 1095	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr4-1356	chr4	149364578	149366672	+	37.8	2094	Intergenic	CpG-20176	-1953	NM_001166104	4306	Hs.163924	NM_000901	ENSG00000151623	NR3C2	MCR|MLR|MR|NR3C2VIT	nuclear receptor subfamily 3 group C member 2	protein-coding	37.76	6.31	5.984152139	1.20E-13
chr4-1363	chr4	155251650	155253210	+	24.3	1560	"intron (NM_001142552, intron 5 of 7)"	MIRb|SINE|MIR	60019	NM_017639	54798	Hs.655664	NM_017639	ENSG00000197410	DCHS2	CDH27|CDHJ|CDHR7|PCDH23|PCDHJ	dachsous cadherin-related 2	protein-coding	24.32	3.4	7.152941176	7.55E-11
chr4-137	chr4	72051926	72055714	+	61.4	3788	"intron (NM_001134742, intron 1 of 24)"	"intron (NM_001134742, intron 1 of 24)"	817	NM_001098484	8671	Hs.5462	NM_003759	ENSG00000080493	SLC4A4	HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC	solute carrier family 4 member 4	protein-coding	61.45	6.31	9.738510301	1.16E-30
chr4-1370	chr4	169752581	169754630	+	33.9	2049	"intron (NM_001166110, intron 1 of 11)"	CpG	449	NM_001166110	23022	Hs.151220	NM_016081	ENSG00000129116	PALLD	CGI-151|CGI151|MYN|PNCA1|SIH002	"palladin, cytoskeletal associated protein"	protein-coding	33.92	4.85	6.993814433	7.28E-14
chr4-1371	chr4	169978601	169979601	+	14.7	1000	Intergenic	AluSc|SINE|Alu	-47633	NM_032783	84869	Hs.659311	NM_032783	ENSG00000145439	CBR4	SDR45C1	carbonyl reductase 4	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr4-1384	chr4	177713654	177715047	+	19.8	1393	promoter-TSS (NM_005429)	promoter-TSS (NM_005429)	-451	NM_005429	7424	Hs.435215	NM_005429	ENSG00000150630	VEGFC	Flt4-L|LMPH1D|VRP	vascular endothelial growth factor C	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr4-1390	chr4	184181809	184182809	+	14.7	1000	"exon (NM_024949, exon 11 of 23)"	"exon (NM_024949, exon 11 of 23)"	-20522	NR_126473	101928734	Hs.570713	NR_126473	ENSG00000251128	WWC2-AS1	-	WWC2 antisense RNA 1	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr4-1394	chr4	184730055	184731055	+	14.7	1000	"intron (NR_132761, intron 1 of 2)"	AluSc5|SINE|Alu	11380	NR_132761	56977	Hs.21958	NM_020225	ENSG00000173320	STOX2	-	storkhead box 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr4-1399	chr4	185668956	185669956	+	13.4	1000	Intergenic	Intergenic	-14170	NR_104593	79682	Hs.575032	NM_024629	ENSG00000151725	CENPU	CENP50|CENPU50|KLIP1|MLF1IP|PBIP1	centromere protein U	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr4-1401	chr4	185963756	185964756	+	14.7	1000	Intergenic	Intergenic	24261	NM_001300782	391723	Hs.531242	NM_001029887	ENSG00000187821	HELT	HCM1228|HESL|Mgn|bHLHb44	helt bHLH transcription factor	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr4-1403	chr4	186484022	186485022	+	14.1	1000	Intergenic	MER4D|LTR|ERV1	-27810	NR_047562	27295	Hs.701364	NM_014476	ENSG00000154553	PDLIM3	ALP	PDZ and LIM domain 3	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr4-1407	chr4	188101534	188102534	+	15.4	1000	Intergenic	Intergenic	324733	NR_038931	339975	Hs.639361	NR_038931		LOC339975	-	uncharacterized LOC339975	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr4-1408	chr4	189162285	189163285	+	15.4	1000	Intergenic	Intergenic	102190	NM_178556	339976	Hs.348618	NM_178556	ENSG00000184108	TRIML1	RNF209	tripartite motif family like 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr4-141	chr4	156587915	156589637	+	38.4	1722	promoter-TSS (NM_001130684)	promoter-TSS (NM_001130684)	-39	NM_001130684	2982	Hs.24258	NM_000856	ENSG00000164116	GUCY1A3	GC-SA3|GUC1A3|GUCA3|GUCSA3|GUCY1A1|MYMY6	guanylate cyclase 1 soluble subunit alpha	protein-coding	38.4	1.94	19.79381443	2.32E-28
chr4-1410	chr4	189279833	189280833	+	15.4	1000	Intergenic	Intergenic	-96399	NR_033869	401164	Hs.435756	NR_033869	ENSG00000249378	LINC01060	-	long intergenic non-protein coding RNA 1060	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr4-145	chr4	8329688	8330951	+	24.3	1263	Intergenic	Intergenic	58827	NM_053044	94031	Hs.479119	NM_053044	ENSG00000170801	HTRA3	Prsp|Tasp	HtrA serine peptidase 3	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr4-177	chr4	187065012	187066264	+	21.1	1252	promoter-TSS (NM_015398)	promoter-TSS (NM_015398)	-357	NM_015398	25854	Hs.744961	NM_015398	ENSG00000109794	FAM149A	MST119|MSTP119	family with sequence similarity 149 member A	protein-coding	21.12	0	21.75608266	5.97E-21
chr4-185	chr4	6450137	6452392	+	37.8	2255	"intron (NM_001206995, intron 2 of 9)"	"intron (NM_001206995, intron 2 of 9)"	23062	NM_020416	5522	Hs.479069	NM_020416	ENSG00000074211	PPP2R2C	B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G	protein phosphatase 2 regulatory subunit Bgamma	protein-coding	37.76	3.88	9.731958763	5.72E-19
chr4-199	chr4	2388315	2389315	+	21.8	1000	"intron (NM_001172657, intron 1 of 6)"	"intron (NM_001172657, intron 1 of 6)"	-22211	NM_001172659	57732	Hs.292056	NM_020972	ENSG00000159733	ZFYVE28	LST2|LYST2	zinc finger FYVE-type containing 28	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr4-203	chr4	7125079	7126339	+	23.7	1260	Intergenic	MIRc|SINE|MIR	-20606	NR_027441	730971	Hs.591718	NR_027441		FLJ36777	-	uncharacterized LOC730971	ncRNA	23.68	1.94	12.20618557	6.71E-14
chr4-208	chr4	7514549	7518658	+	54.4	4109	"intron (NM_020777, intron 2 of 26)"	MER77|LTR|ERVL	54848	NR_036238	100422826		NR_036238	ENSG00000266690	MIR4274	-	microRNA 4274	ncRNA	54.41	4.37	12.45080092	6.23E-31
chr4-218	chr4	122684864	122687407	+	54.4	2543	promoter-TSS (NM_001317839)	promoter-TSS (NM_001317839)	205	NM_001317841	132332	Hs.27524	NM_152399	ENSG00000164112	TMEM155	-	transmembrane protein 155	protein-coding	54.41	3.88	14.02319588	6.41E-33
chr4-225	chr4	174457769	174460983	+	57.6	3214	"non-coding (NR_136192, exon 4 of 4)"	"non-coding (NR_136192, exon 4 of 4)"	7767	NR_003679	79804	Hs.61435	NR_003679	ENSG00000237125	HAND2-AS1	DEIN|NBLA00301|UPH	HAND2 antisense RNA 1 (head to head)	ncRNA	57.61	11.65	4.945064378	1.67E-17
chr4-227	chr4	185983568	185984568	+	21.8	1000	Intergenic	AluSp|SINE|Alu	44073	NM_001300782	391723	Hs.531242	NM_001029887	ENSG00000187821	HELT	HCM1228|HESL|Mgn|bHLHb44	helt bHLH transcription factor	protein-coding	21.76	0.97	22.43298969	1.19E-17
chr4-228	chr4	190575784	190577048	+	26.2	1264	Intergenic	Intergenic	-4344	NR_121679	101928971	Hs.519164	NR_121679	ENSG00000250739	LINC01262	TCONS_l2_00021807	long intergenic non-protein coding RNA 1262	ncRNA	26.24	5.82	4.508591065	7.99E-08
chr4-235	chr4	7911489	7912742	+	22.4	1253	"intron (NM_001134647, intron 1 of 17)"	"intron (NM_001134647, intron 1 of 17)"	-28613	NM_203423	389199	Hs.375210	NM_203423		LOC389199	-	uncharacterized LOC389199	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr4-238	chr4	24473831	24475107	+	24.3	1276	promoter-TSS (NM_001330751)	promoter-TSS (NM_001330751)	-17	NM_001330752	10891	Hs.527078	NM_013261	ENSG00000109819	PPARGC1A	LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1	PPARG coactivator 1 alpha	protein-coding	24.32	1.94	12.53608247	5.33E-15
chr4-249	chr4	1415467	1416717	+	22.4	1250	Intergenic	AluSz|SINE|Alu	-15862	NM_001290079	54729	Hs.526396	NM_001290079	ENSG00000235608	NKX1-1	HSPX153|NKX-1.1|SAX2	NK1 homeobox 1	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr4-252	chr4	2438177	2439924	+	28.8	1747	"intron (NM_001193282, intron 3 of 15)"	"intron (NM_001193282, intron 3 of 15)"	18378	NM_001193282	402160	Hs.443116	NM_001193282	ENSG00000206113	CFAP99	-	cilia and flagella associated protein 99	protein-coding	28.8	4.85	5.93814433	1.30E-10
chr4-255	chr4	3639347	3640347	+	19.8	1000	Intergenic	L1MEc|LINE|L1	39735	NR_034136	100133461	Hs.554274	NR_034136	ENSG00000250632	LOC100133461	-	uncharacterized LOC100133461	ncRNA	19.84	4.85	4.090721649	1.08E-05
chr4-256	chr4	3865171	3866531	+	22.4	1360	Intergenic	Intergenic	91304	NR_130742	348926	Hs.591720	NR_024253	ENSG00000251669	FAM86EP	-	"family with sequence similarity 86, member A pseudogene"	pseudo	22.4	2.91	7.697594502	3.87E-10
chr4-262	chr4	6502075	6504047	+	35.2	1972	"intron (NM_001206995, intron 2 of 9)"	"intron (NM_001206995, intron 2 of 9)"	-28735	NM_020416	5522	Hs.479069	NM_020416	ENSG00000074211	PPP2R2C	B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G	protein phosphatase 2 regulatory subunit Bgamma	protein-coding	35.2	3.88	9.072164948	5.09E-17
chr4-265	chr4	7486024	7493006	+	112	6982	"intron (NM_020777, intron 2 of 26)"	"intron (NM_020777, intron 2 of 26)"	27760	NR_036238	100422826		NR_036238	ENSG00000266690	MIR4274	-	microRNA 4274	ncRNA	112.01	15.05	7.442524917	5.49E-45
chr4-270	chr4	7729490	7730791	+	26.2	1301	"exon (NM_020777, exon 22 of 27)"	"exon (NM_020777, exon 22 of 27)"	-25677	NR_026892	84740	Hs.663029	NM_032654	ENSG00000272620	AFAP1-AS1	AFAP1-AS|AFAP1AS	AFAP1 antisense RNA 1	ncRNA	26.24	4.85	5.410309278	4.26E-09
chr4-271	chr4	7831689	7834927	+	46.7	3238	"intron (NM_001134647, intron 6 of 17)"	"intron (NM_001134647, intron 6 of 17)"	77491	NR_026892	84740	Hs.663029	NM_032654	ENSG00000272620	AFAP1-AS1	AFAP1-AS|AFAP1AS	AFAP1 antisense RNA 1	ncRNA	46.73	11.16	4.187275986	4.14E-12
chr4-274	chr4	10342069	10343069	+	19.2	1000	Intergenic	Intergenic	116463	NM_053042	85460	Hs.455089	NM_053042	ENSG00000178163	ZNF518B	-	zinc finger protein 518B	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr4-275	chr4	17522766	17523766	+	19.2	1000	"intron (NM_001079827, intron 1 of 2)"	MER101|LTR|ERV1	6478	NM_001079827	645104	Hs.631526	NM_001079827	ENSG00000249581	CLRN2	-	clarin 2	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr4-276	chr4	27053984	27054984	+	19.2	1000	Intergenic	Intergenic	-164617	NR_125921	101929199	Hs.570815	NR_125921	ENSG00000249699	LOC101929199	-	uncharacterized LOC101929199	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr4-278	chr4	37404221	37405531	+	23.7	1310	"intron (NM_001144990, intron 3 of 6)"	L2a|LINE|L2	-50676	NM_001104629	55286	Hs.107527	NM_018302	ENSG00000154274	C4orf19	-	chromosome 4 open reading frame 19	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr4-279	chr4	40631237	40632572	+	22.4	1335	promoter-TSS (NM_001098634)	promoter-TSS (NM_001098634)	-21	NM_001098634	54502	Hs.518727	NM_019027	ENSG00000163694	RBM47	NET18	RNA binding motif protein 47	protein-coding	22.4	0.97	23.09278351	1.19E-17
chr4-280	chr4	41877584	41878584	+	19.2	1000	Intergenic	MIRc|SINE|MIR	6544	NR_104143	101927074	Hs.611425	NR_104143	ENSG00000245870	LINC00682	-	long intergenic non-protein coding RNA 682	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr4-284	chr4	83483207	83484759	+	28.2	1552	promoter-TSS (NM_001080506)	promoter-TSS (NM_001080506)	-857	NM_001080506	441027	Hs.507676	NM_001080506	ENSG00000249242	TMEM150C	TTN3	transmembrane protein 150C	protein-coding	28.16	3.88	7.257731959	1.97E-12
chr4-286	chr4	113431398	113432819	+	36.5	1421	Intergenic	CpG	5220	NM_024019	63973	Hs.744415	NM_024019	ENSG00000178403	NEUROG2	Atoh4|Math4A|NGN2|bHLHa8|ngn-2	neurogenin 2	protein-coding	36.48	6.8	5.364705882	3.95E-12
chr4-289	chr4	123508004	123511085	+	51.8	3081	Intergenic	Intergenic	-30594	NR_104126	100996941	Hs.439487	NR_104126	ENSG00000227145	IL21-AS1	-	IL21 antisense RNA 1	ncRNA	51.85	9.71	5.339855819	1.19E-16
chr4-294	chr4	183369311	183371721	+	47.4	2410	"intron (NM_001080477, intron 3 of 27)"	"intron (NM_001080477, intron 3 of 27)"	205932	NM_001080477	55714	Hs.130438	NM_001080477	ENSG00000218336	TENM3	MCOPCB9|ODZ3|TNM3|Ten-m3|ten-3	teneurin transmembrane protein 3	protein-coding	47.37	2.91	16.27835052	1.28E-31
chr4-304	chr4	3300621	3301621	+	19.2	1000	Intergenic	L1MEb|LINE|L1	-14753	NM_198229	6002	Hs.527061	NM_002926	ENSG00000159788	RGS12	-	regulator of G-protein signaling 12	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr4-31	chr4	1795730	1798590	+	64	2860	"intron (NM_022965, intron 2 of 15)"	GC_rich|Low_complexity|Low_complexity	2121	NM_022965	2261	Hs.1420	NM_000142	ENSG00000068078	FGFR3	ACH|CD333|CEK2|HSFGFR3EX|JTK4	fibroblast growth factor receptor 3	protein-coding	64.01	4.85	13.19793814	6.99E-38
chr4-311	chr4	7656537	7657537	+	19.2	1000	"intron (NM_020777, intron 5 of 26)"	"intron (NM_020777, intron 5 of 26)"	-98780	NR_026892	84740	Hs.663029	NM_032654	ENSG00000272620	AFAP1-AS1	AFAP1-AS|AFAP1AS	AFAP1 antisense RNA 1	ncRNA	19.2	2.43	7.901234568	1.91E-09
chr4-318	chr4	10244562	10245562	+	17.9	1000	Intergenic	Intergenic	-126489	NM_005112	9948	Hs.128548	NM_005112	ENSG00000071127	WDR1	AIP1|HEL-S-52|NORI-1	WD repeat domain 1	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr4-324	chr4	57975469	57976837	+	25	1368	"exon (NM_001553, exon 1 of 5)"	"exon (NM_001553, exon 1 of 5)"	225	NR_034081	255130	Hs.691061	NR_034081	ENSG00000245067	IGFBP7-AS1	-	IGFBP7 antisense RNA 1	ncRNA	24.96	1.94	12.86597938	5.33E-15
chr4-330	chr4	123514004	123518998	+	70.4	4994	Intergenic	L1ME2|LINE|L1	-23637	NR_104126	100996941	Hs.439487	NR_104126	ENSG00000227145	IL21-AS1	-	IL21 antisense RNA 1	ncRNA	70.41	12.62	5.579239303	2.28E-23
chr4-332	chr4	144620814	144622170	+	26.2	1356	"exon (NM_001168235, exon 1 of 8)"	"exon (NM_001168235, exon 1 of 8)"	336	NM_001168235	166752	Hs.252714	NM_001168235	ENSG00000183090	FREM3	-	FRAS1 related extracellular matrix 3	protein-coding	26.24	3.88	6.762886598	1.00E-10
chr4-333	chr4	154965015	154966015	+	18.6	1000	Intergenic	Intergenic	-255287	NM_003013	6423	Hs.481022	NM_003013	ENSG00000145423	SFRP2	FRP-2|SARP1|SDF-5	secreted frizzled related protein 2	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr4-341	chr4	184251212	184252770	+	26.9	1558	Intergenic	Intergenic	-8412	NM_001185149	100132463	Hs.727475	NM_001185149	ENSG00000185758	CLDN24	CLDN21	claudin 24	protein-coding	26.88	2.91	9.237113402	7.03E-14
chr4-342	chr4	184318668	184321241	+	43.5	2573	Intergenic	CpG	-45790	NM_017632	55602	Hs.592508	NM_017632	ENSG00000168564	CDKN2AIP	CARF	CDKN2A interacting protein	protein-coding	43.53	5.82	7.479381443	9.68E-19
chr4-348	chr4	1549479	1550750	+	18.6	1271	Intergenic	Intergenic	135604	NM_001013622	152877	Hs.143314	NM_001013622	ENSG00000174137	FAM53A	DNTNP	family with sequence similarity 53 member A	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr4-354	chr4	3479341	3487593	+	124.8	8252	"intron (NM_001301071, intron 4 of 9)"	"intron (NM_001301071, intron 4 of 9)"	-2804	NM_001256896	285489	Hs.122110	NM_173660	ENSG00000175920	DOK7	C4orf25|CMS10|CMS1B	docking protein 7	protein-coding	124.82	16.02	7.791510612	1.21E-51
chr4-356	chr4	3667808	3669058	+	20.5	1250	Intergenic	Intergenic	11149	NR_034136	100133461	Hs.554274	NR_034136	ENSG00000250632	LOC100133461	-	uncharacterized LOC100133461	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr4-359	chr4	4889625	4890625	+	18.6	1000	Intergenic	Intergenic	28733	NM_002448	4487	Hs.424414	NM_002448	ENSG00000163132	MSX1	ECTD3|HOX7|HYD1|STHAG1	msh homeobox 1	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr4-360	chr4	5789236	5790236	+	18.6	1000	"intron (NM_153717, intron 12 of 20)"	L2a|LINE|L2	76812	NM_001306090	2121	Hs.646899	NM_014556	ENSG00000072840	EVC	DWF-1|EVC1|EVCL	EvC ciliary complex subunit 1	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr4-364	chr4	6521159	6522426	+	22.4	1267	"intron (NM_001206995, intron 2 of 9)"	"intron (NM_001206995, intron 2 of 9)"	35613	NM_001206995	5522	Hs.479069	NM_020416	ENSG00000074211	PPP2R2C	B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G	protein phosphatase 2 regulatory subunit Bgamma	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr4-368	chr4	7825740	7826740	+	19.2	1000	"intron (NM_001134647, intron 6 of 17)"	"intron (NM_001134647, intron 6 of 17)"	70423	NR_026892	84740	Hs.663029	NM_032654	ENSG00000272620	AFAP1-AS1	AFAP1-AS|AFAP1AS	AFAP1 antisense RNA 1	ncRNA	19.2	4.37	4.393592677	3.16E-06
chr4-373	chr4	40857922	40859771	+	37.1	1849	"intron (NM_001166051, intron 1 of 6)"	"intron (NM_001166051, intron 1 of 6)"	326	NM_001166051	323	Hs.479602	NM_004307	ENSG00000163697	APBB2	FE65L|FE65L1	amyloid beta precursor protein binding family B member 2	protein-coding	37.12	4.37	8.494279176	1.21E-17
chr4-376	chr4	82964300	82966045	+	28.8	1745	Intergenic	Intergenic	329977	NM_031369	3184	Hs.480073	NM_002138	ENSG00000138668	HNRNPD	AUF1|AUF1A|HNRPD|P37|hnRNPD0	heterogeneous nuclear ribonucleoprotein D	protein-coding	28.8	3.4	8.470588235	1.50E-13
chr4-379	chr4	84264997	84265997	+	17.9	1000	Intergenic	Intergenic	-9191	NM_001166498	10855	Hs.44227	NM_006665	ENSG00000173083	HPSE	HPA|HPA1|HPR1|HPSE1|HSE1	heparanase	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr4-380	chr4	85423106	85424930	+	31.4	1824	Intergenic	Intergenic	-4631	NM_006168	4825	Hs.546270	NM_006168	ENSG00000163623	NKX6-1	NKX6.1|NKX6A	NK6 homeobox 1	protein-coding	31.36	6.8	4.611764706	2.53E-09
chr4-383	chr4	114559822	114560822	+	17.9	1000	"intron (NM_001321576, intron 3 of 17)"	AluJr|SINE|Alu	122761	NM_172127	817	Hs.144114	NM_001221	ENSG00000145349	CAMK2D	CAMKD	calcium/calmodulin dependent protein kinase II delta	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr4-398	chr4	153855891	153859862	+	81.3	3971	"non-coding (NR_136614, exon 1 of 2)"	"non-coding (NR_136614, exon 1 of 2)"	113	NR_136614	729870	Hs.310357	NR_136614		LOC729870	-	uncharacterized LOC729870	ncRNA	81.29	11.65	6.977682403	1.72E-31
chr4-402	chr4	184308407	184309407	+	18.6	1000	Intergenic	Intergenic	-56837	NM_017632	55602	Hs.592508	NM_017632	ENSG00000168564	CDKN2AIP	CARF	CDKN2A interacting protein	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr4-404	chr4	186730658	186731658	+	18.6	1000	"intron (NM_021069, intron 1 of 20)"	"intron (NM_021069, intron 1 of 20)"	890	NM_001145672	8470	Hs.481342	NM_003603	ENSG00000154556	SORBS2	ARGBP2|PRO0618	sorbin and SH3 domain containing 2	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr4-409	chr4	817905	818905	+	17.9	1000	"intron (NM_006651, intron 1 of 3)"	"intron (NM_006651, intron 1 of 3)"	1540	NM_006651	10815	Hs.478930	NM_006651	ENSG00000168993	CPLX1	CPX-I|CPX1	complexin 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr4-410	chr4	1165424	1166840	+	21.8	1416	"intron (NM_012445, intron 1 of 5)"	CpG-19418	525	NM_012445	10417	Hs.302963	NM_012445	ENSG00000159674	SPON2	DIL-1|DIL1|M-SPONDIN|MINDIN	spondin 2	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr4-413	chr4	1769666	1773095	+	56.3	3429	Intergenic	Intergenic	-23659	NM_000142	2261	Hs.1420	NM_000142	ENSG00000068078	FGFR3	ACH|CD333|CEK2|HSFGFR3EX|JTK4	fibroblast growth factor receptor 3	protein-coding	56.33	5.82	9.678694158	3.96E-28
chr4-425	chr4	7291099	7292099	+	16.6	1000	"intron (NM_020777, intron 1 of 26)"	"intron (NM_020777, intron 1 of 26)"	-20578	NR_039961	100616471		NR_039961	ENSG00000264658	MIR4798	-	microRNA 4798	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr4-438	chr4	8045074	8046074	+	16.6	1000	"intron (NM_001130083, intron 9 of 20)"	"intron (NM_001130083, intron 9 of 20)"	28169	NM_001286688	84448	Hs.233404	NM_032432	ENSG00000163995	ABLIM2	-	actin binding LIM protein family member 2	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr4-439	chr4	8084613	8085937	+	19.2	1324	"intron (NM_001130083, intron 4 of 20)"	"intron (NM_001130083, intron 4 of 20)"	-11532	NM_001286688	84448	Hs.233404	NM_032432	ENSG00000163995	ABLIM2	-	actin binding LIM protein family member 2	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr4-441	chr4	8867604	8868948	+	19.8	1344	TTS (NM_018942)	TTS (NM_018942)	5267	NM_018942	3166	Hs.104134	NM_018942	ENSG00000215612	HMX1	H6|NKX5-3	H6 family homeobox 1	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr4-442	chr4	10255661	10256911	+	18.6	1250	Intergenic	Intergenic	-137713	NM_005112	9948	Hs.128548	NM_005112	ENSG00000071127	WDR1	AIP1|HEL-S-52|NORI-1	WD repeat domain 1	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr4-444	chr4	15924919	15926176	+	19.8	1257	Intergenic	Intergenic	14816	NM_005130	9982	Hs.1690	NM_005130	ENSG00000137440	FGFBP1	FGF-BP|FGF-BP1|FGFBP|FGFBP-1|HBP17	fibroblast growth factor binding protein 1	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr4-446	chr4	16052926	16053926	+	16.6	1000	"intron (NM_001145850, intron 1 of 24)"	"intron (NM_001145850, intron 1 of 24)"	24315	NM_001145852	8842	Hs.614734	NM_006017	ENSG00000007062	PROM1	AC133|CD133|CORD12|MCDR2|MSTP061|PROML1|RP41|STGD4	prominin 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr4-447	chr4	38702963	38703963	+	18.6	1000	TTS (NM_016531)	TTS (NM_016531)	-37214	NR_026804	79667	Hs.29725	NM_024614	ENSG00000231160	KLF3-AS1	-	KLF3 antisense RNA 1	ncRNA	18.56	2.43	7.637860082	1.53E-08
chr4-448	chr4	40568433	40569687	+	23	1254	"intron (NM_001098634, intron 1 of 6)"	"intron (NM_001098634, intron 1 of 6)"	-51070	NM_019027	54502	Hs.518727	NM_019027	ENSG00000163694	RBM47	NET18	RNA binding motif protein 47	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr4-451	chr4	42153719	42154980	+	20.5	1261	"5' UTR (NM_001159547, exon 2 of 6)"	"5' UTR (NM_001159547, exon 2 of 6)"	546	NM_001159547	389206	Hs.120591	NM_207406	ENSG00000188848	BEND4	CCDC4	BEN domain containing 4	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr4-454	chr4	57983658	57984658	+	18.6	1000	"intron (NR_034081, intron 1 of 4)"	"intron (NR_034081, intron 1 of 4)"	-7607	NM_001253835	3490	Hs.479808	NM_001553	ENSG00000163453	IGFBP7	AGM|FSTL2|IBP-7|IGFBP-7|IGFBP-7v|IGFBPRP1|MAC25|PSF|RAMSVPS|TAF	insulin like growth factor binding protein 7	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr4-457	chr4	84225968	84226968	+	17.9	1000	"intron (NM_001166498, intron 8 of 10)"	"intron (NM_001166498, intron 8 of 10)"	-20401	NM_015697	27235	Hs.144304	NM_015697	ENSG00000173085	COQ2	CL640|COQ10D1|MSA1|PHB:PPT	"coenzyme Q2, polyprenyltransferase"	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr4-458	chr4	84252847	84257372	+	77.4	4525	"intron (NM_001098540, intron 1 of 11)"	"intron (NM_001098540, intron 1 of 11)"	857	NM_001199830	10855	Hs.44227	NM_006665	ENSG00000173083	HPSE	HPA|HPA1|HPR1|HPSE1|HSE1	heparanase	protein-coding	77.45	18.93	4.091389329	9.35E-19
chr4-461	chr4	113440959	113445762	+	80	4803	Intergenic	Intergenic	-6032	NM_024019	63973	Hs.744415	NM_024019	ENSG00000178403	NEUROG2	Atoh4|Math4A|NGN2|bHLHa8|ngn-2	neurogenin 2	protein-coding	80.01	9.71	8.239958805	6.53E-35
chr4-463	chr4	119808965	119809965	+	18.6	1000	promoter-TSS (NM_001128934)	promoter-TSS (NM_001128934)	-531	NM_133477	171024	Hs.655519	NM_133477	ENSG00000172403	SYNPO2	-	synaptopodin 2	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr4-467	chr4	123500745	123503832	+	44.8	3087	Intergenic	Intergenic	-37850	NR_104126	100996941	Hs.439487	NR_104126	ENSG00000227145	IL21-AS1	-	IL21 antisense RNA 1	ncRNA	44.81	9.22	4.860086768	9.30E-14
chr4-469	chr4	126236532	126237532	+	18.6	1000	promoter-TSS (NM_001291285)	promoter-TSS (NM_001291285)	-535	NM_001291303	79633	Hs.563205	NM_024582	ENSG00000196159	FAT4	CDHF14|CDHR11|FAT-J|FATJ|HKLLS2|NBLA00548|VMLDS2	FAT atypical cadherin 4	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr4-470	chr4	139251056	139252308	+	17.9	1252	"intron (NR_051987, intron 1 of 2)"	L3|LINE|CR1	20817	NR_051987	100874047	Hs.570848	NR_051987	ENSG00000251372	LINC00499	-	long intergenic non-protein coding RNA 499	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr4-472	chr4	144256612	144260026	+	67.2	3414	"5' UTR (NM_002039, exon 1 of 10)"	"5' UTR (NM_002039, exon 1 of 10)"	336	NM_002039	2549	Hs.80720	NM_002039	ENSG00000109458	GAB1	-	GRB2 associated binding protein 1	protein-coding	67.21	11.65	5.769098712	1.24E-22
chr4-474	chr4	164391192	164392192	+	18.6	1000	TTS (NM_032136)	TTS (NM_032136)	3355	NM_032136	84076	Hs.303923	NM_032136	ENSG00000151005	TKTL2	-	transketolase like 2	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr4-475	chr4	169551861	169553750	+	33.3	1889	promoter-TSS (NM_001166109)	promoter-TSS (NM_001166109)	37	NM_001166109	23022	Hs.151220	NM_016081	ENSG00000129116	PALLD	CGI-151|CGI151|MYN|PNCA1|SIH002	"palladin, cytoskeletal associated protein"	protein-coding	33.28	5.82	5.718213058	4.04E-12
chr4-476	chr4	174428971	174432784	+	62.7	3813	"intron (NM_001329597, intron 1 of 3)"	"intron (NM_001329597, intron 1 of 3)"	9512	NM_001329597	11341	Hs.7122	NM_007281	ENSG00000164106	SCRG1	SCRG-1	stimulator of chondrogenesis 1	protein-coding	62.73	13.59	4.61589404	9.58E-18
chr4-483	chr4	183064799	183066355	+	26.9	1556	promoter-TSS (NR_027107)	promoter-TSS (NR_027107)	91	NR_125905	90768	Hs.175465	NR_027107		LOC90768	-	uncharacterized LOC90768	ncRNA	26.88	1.46	18.4109589	9.89E-20
chr4-488	chr4	185738679	185739679	+	17.3	1000	"intron (NM_001286711, intron 1 of 19)"	"intron (NM_001286711, intron 1 of 19)"	-5766	NM_001286708	2180	Hs.406678	NM_001995	ENSG00000151726	ACSL1	ACS1|FACL1|FACL2|LACS|LACS1|LACS2	acyl-CoA synthetase long-chain family member 1	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr4-489	chr4	185743192	185746881	+	60.2	3689	"intron (NM_001286711, intron 1 of 19)"	"intron (NM_001286711, intron 1 of 19)"	2232	NM_001995	2180	Hs.406678	NM_001995	ENSG00000151726	ACSL1	ACS1|FACL1|FACL2|LACS|LACS1|LACS2	acyl-CoA synthetase long-chain family member 1	protein-coding	60.17	8.74	6.884439359	7.80E-24
chr4-490	chr4	186461694	186462694	+	21.8	1000	Intergenic	Intergenic	-5482	NR_047562	27295	Hs.701364	NM_014476	ENSG00000154553	PDLIM3	ALP	PDZ and LIM domain 3	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr4-497	chr4	1029703	1030703	+	16.6	1000	Intergenic	Intergenic	23951	NM_021923	53834	Hs.193326	NM_021923	ENSG00000127418	FGFRL1	FGFR5|FHFR	fibroblast growth factor receptor-like 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr4-498	chr4	1479031	1480031	+	16.6	1000	Intergenic	Intergenic	-79301	NM_001290079	54729	Hs.526396	NM_001290079	ENSG00000235608	NKX1-1	HSPX153|NKX-1.1|SAX2	NK1 homeobox 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr4-501	chr4	2090158	2091158	+	17.9	1000	"intron (NM_181808, intron 20 of 25)"	"intron (NM_181808, intron 20 of 25)"	29419	NM_178557	339983	Hs.318529	NM_178557	ENSG00000185818	NAT8L	CML3|NACED|NAT8-LIKE	N-acetyltransferase 8 like	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr4-503	chr4	2270036	2271036	+	17.3	1000	TTS (NM_001172659)	TTS (NM_001172659)	-6797	NM_006454	10608	Hs.655020	NM_006454	ENSG00000123933	MXD4	MAD4|MST149|MSTP149|bHLHc12	MAX dimerization protein 4	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr4-509	chr4	2462114	2465486	+	77.4	3372	"intron (NM_001193282, intron 14 of 15)"	AluJb|SINE|Alu	-6995	NM_002938	6047	Hs.66394	NM_002938	ENSG00000063978	RNF4	RES4-26|SLX5|SNURF	ring finger protein 4	protein-coding	77.45	10.19	7.600588813	5.56E-32
chr4-513	chr4	3733157	3734157	+	17.3	1000	Intergenic	Intergenic	-34639	NM_000683	152	Hs.123022	NM_000683	ENSG00000184160	ADRA2C	ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR	adrenoceptor alpha 2C	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr4-514	chr4	3737464	3739084	+	25.6	1620	Intergenic	HAL1|LINE|L1	-30022	NM_000683	152	Hs.123022	NM_000683	ENSG00000184160	ADRA2C	ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR	adrenoceptor alpha 2C	protein-coding	25.6	1.94	13.19587629	4.03E-16
chr4-517	chr4	4176709	4179858	+	46.1	3149	Intergenic	Intergenic	50338	NM_177998	133060	Hs.534544	NM_177998	ENSG00000163982	OTOP1	-	otopetrin 1	protein-coding	46.09	3.88	11.87886598	3.15E-26
chr4-519	chr4	6023919	6024919	+	16.6	1000	Intergenic	LTR87|LTR|ERVL?	-99364	NR_039608	100616201		NR_039608	ENSG00000263631	MIR378D1	mir-378d-1	microRNA 378d-1	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr4-522	chr4	6517773	6518773	+	17.3	1000	"intron (NM_001206995, intron 2 of 9)"	"intron (NM_001206995, intron 2 of 9)"	39132	NM_001206995	5522	Hs.479069	NM_020416	ENSG00000074211	PPP2R2C	B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G	protein phosphatase 2 regulatory subunit Bgamma	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr4-523	chr4	6532518	6533518	+	17.3	1000	"intron (NM_001206995, intron 2 of 9)"	"intron (NM_001206995, intron 2 of 9)"	24387	NM_001206995	5522	Hs.479069	NM_020416	ENSG00000074211	PPP2R2C	B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G	protein phosphatase 2 regulatory subunit Bgamma	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr4-524	chr4	7090260	7091260	+	16.6	1000	Intergenic	MER41-int|LTR|ERV1	14343	NR_027441	730971	Hs.591718	NR_027441		FLJ36777	-	uncharacterized LOC730971	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr4-525	chr4	7167637	7169545	+	30.1	1908	Intergenic	Intergenic	-25783	NM_020777	57537	Hs.479099	NM_020777	ENSG00000184985	SORCS2	-	sortilin related VPS10 domain containing receptor 2	protein-coding	30.08	5.82	5.16838488	6.85E-10
chr4-526	chr4	7287188	7288188	+	17.3	1000	"intron (NM_020777, intron 1 of 26)"	"intron (NM_020777, intron 1 of 26)"	-24489	NR_039961	100616471		NR_039961	ENSG00000264658	MIR4798	-	microRNA 4798	ncRNA	17.28	0.97	17.81443299	2.06E-12
chr4-527	chr4	7480651	7482964	+	35.2	2313	"intron (NM_020777, intron 2 of 26)"	"intron (NM_020777, intron 2 of 26)"	20052	NR_036238	100422826		NR_036238	ENSG00000266690	MIR4274	-	microRNA 4274	ncRNA	35.2	8.25	4.266666667	1.34E-09
chr4-528	chr4	7501390	7504168	+	42.9	2778	"intron (NM_020777, intron 2 of 26)"	"intron (NM_020777, intron 2 of 26)"	41024	NR_036238	100422826		NR_036238	ENSG00000266690	MIR4274	-	microRNA 4274	ncRNA	42.89	3.88	11.05412371	4.87E-23
chr4-531	chr4	7574829	7576092	+	18.6	1263	"intron (NM_020777, intron 3 of 26)"	"intron (NM_020777, intron 3 of 26)"	113705	NR_036238	100422826		NR_036238	ENSG00000266690	MIR4274	-	microRNA 4274	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr4-533	chr4	7992695	7993695	+	17.3	1000	"intron (NM_001130083, intron 17 of 20)"	"intron (NM_001130083, intron 17 of 20)"	13913	NR_029511	407052		NR_029511	ENSG00000207807	MIR95	MIRN95|hsa-mir-95|miR-95	microRNA 95	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr4-534	chr4	8111262	8115331	+	57.6	4069	"intron (NM_001130083, intron 1 of 20)"	L1MC2|LINE|L1	-39553	NM_001286688	84448	Hs.233404	NM_032432	ENSG00000163995	ABLIM2	-	actin binding LIM protein family member 2	protein-coding	57.61	7.77	7.414414414	3.81E-24
chr4-542	chr4	16019001	16020252	+	19.2	1251	"intron (NM_001145850, intron 8 of 24)"	"intron (NM_001145850, intron 8 of 24)"	-54767	NM_031950	83888	Hs.98785	NM_031950	ENSG00000137441	FGFBP2	HBP17RP|KSP37	fibroblast growth factor binding protein 2	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr4-545	chr4	25524172	25525172	+	17.9	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	46296	NR_134641	101929161	Hs.125638	NR_134641		LOC101929161	-	uncharacterized LOC101929161	ncRNA	17.92	2.43	7.374485597	1.53E-08
chr4-546	chr4	25718906	25719906	+	17.9	1000	Intergenic	MIR|SINE|MIR	61320	NM_001177999	10568	Hs.479372	NM_006424	ENSG00000157765	SLC34A2	NAPI-3B|NAPI-IIb|NPTIIb	solute carrier family 34 member 2	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr4-548	chr4	27724870	27726794	+	32	1924	Intergenic	Intergenic	506731	NR_125921	101929199	Hs.570815	NR_125921	ENSG00000249699	LOC101929199	-	uncharacterized LOC101929199	ncRNA	32	5.34	5.992509363	3.79E-12
chr4-555	chr4	55085508	55086508	+	17.3	1000	Intergenic	AluSz|SINE|Alu	-9248	NM_001347827	5156	Hs.74615	NM_006206	ENSG00000134853	PDGFRA	CD140A|PDGFR-2|PDGFR2	platelet derived growth factor receptor alpha	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr4-557	chr4	56501793	56503227	+	26.2	1434	promoter-TSS (NM_006681)	promoter-TSS (NM_006681)	-45	NM_006681	10874	Hs.418367	NM_006681	ENSG00000109255	NMU	-	neuromedin U	protein-coding	26.24	2.43	10.79835391	2.44E-14
chr4-558	chr4	76295873	76297142	+	19.2	1269	Intergenic	Intergenic	17221	NR_033964	441025	Hs.407667	NR_033964	ENSG00000251383	LOC441025	-	uncharacterized LOC441025	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr4-565	chr4	85160883	85161883	+	16.6	1000	"intron (NR_125909, intron 5 of 8)"	AluJb|SINE|Alu	58939	NR_125909	101928978	Hs.647977	NR_125909	ENSG00000250546	LOC101928978	-	uncharacterized LOC101928978	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr4-576	chr4	123749505	123750815	+	17.9	1310	"intron (NM_002006, intron 1 of 2)"	"intron (NM_002006, intron 1 of 2)"	2297	NM_002006	2247	Hs.284244	NM_002006	ENSG00000138685	FGF2	BFGF|FGF-2|FGFB|HBGF-2	fibroblast growth factor 2	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr4-577	chr4	140570528	140571528	+	17.9	1000	Intergenic	Intergenic	-15894	NM_001204368	4258	Hs.81874	NM_002413	ENSG00000085871	MGST2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr4-578	chr4	140702950	140706410	+	44.8	3460	"intron (NM_018717, intron 3 of 5)"	"intron (NM_018717, intron 3 of 5)"	117758	NM_002413	4258	Hs.81874	NM_002413	ENSG00000085871	MGST2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding	44.81	11.16	4.015232975	1.73E-11
chr4-579	chr4	141093504	141094504	+	16.6	1000	Intergenic	Intergenic	-18771	NM_018717	55534	Hs.586165	NM_018717	ENSG00000196782	MAML3	CAGH3|ERDA3|GDN|MAM-2|MAM2|TNRC3	mastermind like transcriptional coactivator 3	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr4-580	chr4	141114538	141115538	+	17.3	1000	Intergenic	Intergenic	-39805	NM_018717	55534	Hs.586165	NM_018717	ENSG00000196782	MAML3	CAGH3|ERDA3|GDN|MAM-2|MAM2|TNRC3	mastermind like transcriptional coactivator 3	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr4-584	chr4	154680492	154681492	+	14.7	1000	"exon (NM_173662, exon 1 of 9)"	"exon (NM_173662, exon 1 of 9)"	395	NM_173662	285533	Hs.388364	NM_173662	ENSG00000145428	RNF175	-	ring finger protein 175	protein-coding	14.72	0	15.16333034	3.99E-13
chr4-585	chr4	155338575	155339575	+	16.6	1000	"intron (NM_001142552, intron 1 of 7)"	Charlie22a|DNA|hAT-Charlie	-26626	NM_017639	54798	Hs.655664	NM_017639	ENSG00000197410	DCHS2	CDH27|CDHJ|CDHR7|PCDH23|PCDHJ	dachsous cadherin-related 2	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr4-586	chr4	155565986	155566986	+	17.3	1000	Intergenic	Intergenic	-32526	NM_000509	2266	Hs.727584	NM_000509	ENSG00000171557	FGG	-	fibrinogen gamma chain	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr4-588	chr4	174440548	174441548	+	16.6	1000	promoter-TSS (NM_001329597)	promoter-TSS (NM_001329597)	-659	NM_001329597	11341	Hs.7122	NM_007281	ENSG00000164106	SCRG1	SCRG-1	stimulator of chondrogenesis 1	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr4-589	chr4	177117745	177118745	+	17.3	1000	Intergenic	Intergenic	-1423	NM_144644	132851	Hs.481235	NM_144644	ENSG00000150628	SPATA4	SPEF1B|TSARG2	spermatogenesis associated 4	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr4-592	chr4	184115025	184116025	+	16.6	1000	"intron (NM_024949, intron 2 of 22)"	"intron (NM_024949, intron 2 of 22)"	46262	NR_126473	101928734	Hs.570713	NR_126473	ENSG00000251128	WWC2-AS1	-	WWC2 antisense RNA 1	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr4-595	chr4	185704450	185705450	+	17.3	1000	"intron (NM_001286710, intron 4 of 20)"	"intron (NM_001286710, intron 4 of 20)"	15250	NR_003542	643036	Hs.689630	NR_003542	ENSG00000249138	SLED1	-	proteoglycan 3 pseudogene	pseudo	17.28	2.43	7.111111111	1.14E-07
chr4-596	chr4	185937179	185941000	+	61.4	3821	promoter-TSS (NM_001300782)	promoter-TSS (NM_001300782)	-906	NM_001300781	391723	Hs.531242	NM_001029887	ENSG00000187821	HELT	HCM1228|HESL|Mgn|bHLHb44	helt bHLH transcription factor	protein-coding	61.45	8.74	7.030892449	1.11E-24
chr4-598	chr4	186534806	186535806	+	17.9	1000	"intron (NM_021069, intron 17 of 20)"	(T)n|Simple_repeat|Simple_repeat	42817	NM_001145675	8470	Hs.481342	NM_003603	ENSG00000154556	SORBS2	ARGBP2|PRO0618	sorbin and SH3 domain containing 2	protein-coding	17.92	0	18.4597065	9.96E-18
chr4-604	chr4	1492478	1493478	+	16	1000	Intergenic	Intergenic	-92748	NM_001290079	54729	Hs.526396	NM_001290079	ENSG00000235608	NKX1-1	HSPX153|NKX-1.1|SAX2	NK1 homeobox 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr4-608	chr4	2416924	2419862	+	49.3	2938	"intron (NM_001172657, intron 1 of 6)"	CpG	1977	NM_001172658	57732	Hs.292056	NM_020972	ENSG00000159733	ZFYVE28	LST2|LYST2	zinc finger FYVE-type containing 28	protein-coding	49.29	7.28	6.770604396	3.68E-19
chr4-610	chr4	3654874	3655874	+	16.6	1000	Intergenic	Intergenic	24208	NR_034136	100133461	Hs.554274	NR_034136	ENSG00000250632	LOC100133461	-	uncharacterized LOC100133461	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr4-611	chr4	3659237	3660898	+	25.6	1661	Intergenic	Intergenic	19515	NR_034136	100133461	Hs.554274	NR_034136	ENSG00000250632	LOC100133461	-	uncharacterized LOC100133461	ncRNA	25.6	4.37	5.85812357	7.40E-10
chr4-614	chr4	3855363	3856640	+	21.1	1277	Intergenic	Intergenic	87705	NM_000683	152	Hs.123022	NM_000683	ENSG00000184160	ADRA2C	ADRA2L2|ADRA2RL2|ADRARL2|ALPHA2CAR	adrenoceptor alpha 2C	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr4-618	chr4	4385611	4388510	+	40.3	2899	promoter-TSS (NM_001040101)	promoter-TSS (NM_001040101)	-923	NM_001040101	27065	Hs.518595	NM_014392	ENSG00000168824	NSG1	D4S234|D4S234E|NEEP21|P21	neuron specific gene family member 1	protein-coding	40.33	7.77	5.19047619	6.49E-13
chr4-619	chr4	4983080	4984080	+	14.1	1000	"intron (NR_125893, intron 2 of 2)"	"intron (NR_125893, intron 2 of 2)"	37617	NM_018659	54360	Hs.13872	NM_018659	ENSG00000170891	CYTL1	C17|C4orf4	cytokine like 1	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr4-621	chr4	5720566	5721566	+	16.6	1000	"exon (NM_001306090, exon 2 of 21)"	"exon (NM_001306090, exon 2 of 21)"	8142	NM_001306090	2121	Hs.646899	NM_014556	ENSG00000072840	EVC	DWF-1|EVC1|EVCL	EvC ciliary complex subunit 1	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr4-623	chr4	5861068	5862068	+	16	1000	"intron (NM_001014809, intron 3 of 13)"	"intron (NM_001014809, intron 3 of 13)"	27972	NM_001288662	1400	Hs.135270	NM_001313	ENSG00000072832	CRMP1	CRMP-1|DPYSL1|DRP-1|DRP1|ULIP-3	collapsin response mediator protein 1	protein-coding	16	0.49	32.65306122	1.26E-14
chr4-627	chr4	7188076	7189389	+	21.8	1313	Intergenic	Intergenic	-5642	NM_020777	57537	Hs.479099	NM_020777	ENSG00000184985	SORCS2	-	sortilin related VPS10 domain containing receptor 2	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr4-629	chr4	7306148	7312897	+	95.4	6749	"intron (NM_020777, intron 1 of 26)"	(TG)n|Simple_repeat|Simple_repeat	-2655	NR_039961	100616471		NR_039961	ENSG00000264658	MIR4798	-	microRNA 4798	ncRNA	95.37	10.68	8.929775281	1.20E-43
chr4-630	chr4	7382422	7384325	+	28.8	1903	"intron (NM_020777, intron 1 of 26)"	"intron (NM_020777, intron 1 of 26)"	53327	NM_001085382	768239	Hs.662523	NM_001085382	ENSG00000178597	PSAPL1	-	prosaposin-like 1 (gene/pseudogene)	protein-coding	28.8	1.94	14.84536082	1.99E-18
chr4-631	chr4	7429434	7431164	+	25	1730	"intron (NM_020777, intron 2 of 26)"	L2a|LINE|L2	6401	NM_001085382	768239	Hs.662523	NM_001085382	ENSG00000178597	PSAPL1	-	prosaposin-like 1 (gene/pseudogene)	protein-coding	24.96	3.4	7.341176471	7.55E-11
chr4-636	chr4	7886697	7887950	+	19.2	1253	"intron (NM_001134647, intron 1 of 17)"	L2b|LINE|L2	-53405	NM_203423	389199	Hs.375210	NM_203423		LOC389199	-	uncharacterized LOC389199	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr4-637	chr4	8003710	8006013	+	33.9	2303	"intron (NM_001130083, intron 16 of 20)"	MER47A|DNA|TcMar-Tigger	2247	NR_029511	407052		NR_029511	ENSG00000207807	MIR95	MIRN95|hsa-mir-95|miR-95	microRNA 95	ncRNA	33.92	4.85	6.993814433	7.28E-14
chr4-638	chr4	8050573	8051573	+	16	1000	"intron (NM_001130083, intron 8 of 20)"	"intron (NM_001130083, intron 8 of 20)"	22670	NM_001286688	84448	Hs.233404	NM_032432	ENSG00000163995	ABLIM2	-	actin binding LIM protein family member 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr4-643	chr4	10523190	10524190	+	16	1000	"intron (NM_052964, intron 14 of 18)"	AluY|SINE|Alu	-64658	NM_053042	85460	Hs.455089	NM_053042	ENSG00000178163	ZNF518B	-	zinc finger protein 518B	protein-coding	16	0.97	16.49484536	3.54E-11
chr4-647	chr4	16596935	16597935	+	16.6	1000	"exon (NM_001290, exon 3 of 8)"	"exon (NM_001290, exon 3 of 8)"	302997	NM_001290	9079	Hs.714330	NM_001290	ENSG00000169744	LDB2	CLIM1|LDB-2|LDB1	LIM domain binding 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr4-648	chr4	17516333	17517333	+	16	1000	promoter-TSS (NM_001079827)	promoter-TSS (NM_001079827)	45	NM_001079827	645104	Hs.631526	NM_001079827	ENSG00000249581	CLRN2	-	clarin 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr4-649	chr4	24436126	24437126	+	16.6	1000	"intron (NM_001330752, intron 1 of 13)"	"intron (NM_001330752, intron 1 of 13)"	37826	NM_001330751	10891	Hs.527078	NM_013261	ENSG00000109819	PPARGC1A	LEM6|PGC-1(alpha)|PGC-1alpha|PGC-1v|PGC1|PGC1A|PPARGC1	PPARG coactivator 1 alpha	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr4-651	chr4	25863373	25864373	+	16	1000	"intron (NM_001297592, intron 1 of 23)"	CpG	780	NM_015187	23231	Hs.479384	NM_015187	ENSG00000091490	SEL1L3	Sel-1L3	SEL1L family member 3	protein-coding	16	0	16.4818808	1.26E-14
chr4-652	chr4	25877087	25878352	+	18.6	1265	Intergenic	Intergenic	-12502	NM_001297592	23231	Hs.479384	NM_015187	ENSG00000091490	SEL1L3	Sel-1L3	SEL1L family member 3	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr4-653	chr4	26294560	26297919	+	47.4	3359	Intergenic	AluSz|SINE|Alu	-25093	NM_203283	3516	Hs.479396	NM_005349	ENSG00000168214	RBPJ	AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl	recombination signal binding protein for immunoglobulin kappa J region	protein-coding	47.37	4.85	9.767010309	4.75E-24
chr4-656	chr4	38663825	38667822	+	65.9	3997	promoter-TSS (NM_016531)	promoter-TSS (NM_016531)	33	NM_016531	51274	Hs.298658	NM_016531	ENSG00000109787	KLF3	BKLF	Kruppel like factor 3	protein-coding	65.93	8.74	7.543478261	2.79E-27
chr4-660	chr4	42353851	42354851	+	17.3	1000	"intron (NR_134668, intron 1 of 1)"	MER44A|DNA|TcMar-Tigger	38934	NR_134668	105374428	Hs.245131	NR_134668	ENSG00000250781	LOC105374428	-	uncharacterized LOC105374428	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr4-663	chr4	55091268	55092536	+	17.9	1268	Intergenic	Intergenic	-3354	NM_001347827	5156	Hs.74615	NM_006206	ENSG00000134853	PDGFRA	CD140A|PDGFR-2|PDGFR2	platelet derived growth factor receptor alpha	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr4-668	chr4	62065834	62066834	+	16.6	1000	promoter-TSS (NM_001322246)	promoter-TSS (NM_001322246)	-640	NM_001322402	23284	Hs.28391	NM_015236	ENSG00000150471	ADGRL3	CIRL3|CL3|LEC3|LPHN3	adhesion G protein-coupled receptor L3	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr4-669	chr4	72307382	72308637	+	20.5	1255	"intron (NM_001134742, intron 8 of 24)"	"intron (NM_001134742, intron 8 of 24)"	103239	NM_003759	8671	Hs.5462	NM_003759	ENSG00000080493	SLC4A4	HNBC1|KNBC|NBC1|NBC2|NBCe1-A|SLC4A5|hhNMC|kNBC1|pNBC	solute carrier family 4 member 4	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr4-670	chr4	78300274	78301947	+	29.4	1673	Intergenic	Intergenic	-131797	NM_006419	10563	Hs.100431	NM_006419	ENSG00000156234	CXCL13	ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13	C-X-C motif chemokine ligand 13	protein-coding	29.44	4.37	6.736842105	2.70E-12
chr4-671	chr4	78329062	78330062	+	16.6	1000	Intergenic	Intergenic	-103345	NM_006419	10563	Hs.100431	NM_006419	ENSG00000156234	CXCL13	ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13	C-X-C motif chemokine ligand 13	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr4-672	chr4	78334196	78335196	+	16.6	1000	Intergenic	Intergenic	-98211	NM_006419	10563	Hs.100431	NM_006419	ENSG00000156234	CXCL13	ANGIE|ANGIE2|BCA-1|BCA1|BLC|BLR1L|SCYB13	C-X-C motif chemokine ligand 13	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr4-673	chr4	78978229	78979598	+	21.1	1369	"5' UTR (NM_025074, exon 1 of 74)"	"5' UTR (NM_025074, exon 1 of 74)"	189	NM_001166133	80144	Hs.369448	NM_020875	ENSG00000138759	FRAS1	-	Fraser extracellular matrix complex subunit 1	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr4-677	chr4	88605207	88606207	+	16	1000	Intergenic	L2a|LINE|L2	34253	NM_001079911	1758	Hs.652366	NM_004407	ENSG00000152592	DMP1	ARHP|ARHR|DMP-1	dentin matrix acidic phosphoprotein 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr4-679	chr4	90445196	90446196	+	16.6	1000	Intergenic	AluSz|SINE|Alu	-216535	NM_198281	285513	Hs.100912	NM_198281	ENSG00000185477	GPRIN3	GRIN3	GPRIN family member 3	protein-coding	16.64	0	17.14115603	3.68E-16
chr4-687	chr4	120548388	120551466	+	35.8	3078	promoter-TSS (NM_001083)	promoter-TSS (NM_001083)	54	NM_001083	8654	Hs.647971	NM_001083	ENSG00000138735	PDE5A	CGB-PDE|CN5A|PDE5	phosphodiesterase 5A	protein-coding	35.84	6.8	5.270588235	3.95E-12
chr4-690	chr4	123521677	123525194	+	60.2	3517	Intergenic	MIRc|SINE|MIR	-16703	NR_104126	100996941	Hs.439487	NR_104126	ENSG00000227145	IL21-AS1	-	IL21 antisense RNA 1	ncRNA	60.17	11.65	5.164806867	6.32E-19
chr4-692	chr4	141172278	141174437	+	35.8	2159	Intergenic	Intergenic	-5083	NM_032547	60592	Hs.480815	NM_032547	ENSG00000153130	SCOC	HRIHFB2072|SCOCO|UNC-69	short coiled-coil protein	protein-coding	35.84	2.91	12.3161512	3.62E-21
chr4-698	chr4	165924427	165925427	+	17.3	1000	Intergenic	Intergenic	-26109	NM_001012414	391712	Hs.654633	NM_001012414	ENSG00000183439	TRIM61	RNF35	tripartite motif containing 61	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr4-700	chr4	170710581	170711581	+	16.6	1000	Intergenic	SATR1|Satellite|Satellite	-31988	NM_017867	54969	Hs.406756	NM_017867	ENSG00000056050	HPF1	C4orf27	histone PARylation factor 1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr4-701	chr4	173883671	173884671	+	17.3	1000	"intron (NM_001034845, intron 10 of 12)"	L2a|LINE|L2	-205733	NM_017423	51809	Hs.548088	NM_017423	ENSG00000109586	GALNT7	GALNAC-T7|GalNAcT7	polypeptide N-acetylgalactosaminyltransferase 7	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr4-702	chr4	173891109	173892109	+	16	1000	"intron (NM_001034845, intron 10 of 12)"	MER11A|LTR|ERVK	-198295	NM_017423	51809	Hs.548088	NM_017423	ENSG00000109586	GALNT7	GALNAC-T7|GalNAcT7	polypeptide N-acetylgalactosaminyltransferase 7	protein-coding	16	1.94	8.24742268	7.67E-08
chr4-705	chr4	174679485	174680485	+	17.3	1000	Intergenic	Intergenic	228376	NR_003679	79804	Hs.61435	NR_003679	ENSG00000237125	HAND2-AS1	DEIN|NBLA00301|UPH	HAND2 antisense RNA 1 (head to head)	ncRNA	17.28	1.46	11.83561644	2.99E-10
chr4-708	chr4	184053753	184054753	+	16.6	1000	"intron (NM_024949, intron 1 of 22)"	T-rich|Low_complexity|Low_complexity	33790	NM_024949	80014	Hs.333179	NM_024949	ENSG00000151718	WWC2	BOMB	WW and C2 domain containing 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr4-711	chr4	184786772	184788163	+	23.7	1391	"intron (NR_132761, intron 1 of 2)"	"intron (NR_132761, intron 1 of 2)"	-39042	NM_020225	56977	Hs.21958	NM_020225	ENSG00000173320	STOX2	-	storkhead box 2	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr4-713	chr4	184840498	184841498	+	16.6	1000	"intron (NM_020225, intron 1 of 3)"	AluJr|SINE|Alu	14489	NM_020225	56977	Hs.21958	NM_020225	ENSG00000173320	STOX2	-	storkhead box 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr4-716	chr4	186498980	186499980	+	16	1000	Intergenic	Intergenic	-42768	NR_047562	27295	Hs.701364	NM_014476	ENSG00000154553	PDLIM3	ALP	PDZ and LIM domain 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr4-717	chr4	186939578	186940578	+	16	1000	Intergenic	L2a|LINE|L2	-50231	NM_003265	7098	Hs.657724	NM_003265	ENSG00000164342	TLR3	CD283|IIAE2	toll like receptor 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr4-718	chr4	186949876	186951172	+	23	1296	Intergenic	MER4D|LTR|ERV1	-39785	NM_003265	7098	Hs.657724	NM_003265	ENSG00000164342	TLR3	CD283|IIAE2	toll like receptor 3	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr4-719	chr4	187337639	187338639	+	16.6	1000	"intron (NR_033901, intron 6 of 6)"	LTR33|LTR|ERVL	84073	NR_033901	285441	Hs.481369	NR_033900	ENSG00000251165	F11-AS1	-	F11 antisense RNA 1	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr4-730	chr4	1764085	1765085	+	14.1	1000	Intergenic	Intergenic	-30454	NM_000142	2261	Hs.1420	NM_000142	ENSG00000068078	FGFR3	ACH|CD333|CEK2|HSFGFR3EX|JTK4	fibroblast growth factor receptor 3	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr4-732	chr4	2035316	2036316	+	16.6	1000	Intergenic	AluSx3|SINE|Alu	-7904	NM_001168243	401115	Hs.446474	NM_001141936	ENSG00000243449	C4orf48	CHR4_55	chromosome 4 open reading frame 48	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr4-733	chr4	2391234	2396497	+	77.4	5263	"intron (NM_001172657, intron 1 of 6)"	AluSx1|SINE|Alu	26505	NM_001172658	57732	Hs.292056	NM_020972	ENSG00000159733	ZFYVE28	LST2|LYST2	zinc finger FYVE-type containing 28	protein-coding	77.45	9.71	7.976313079	4.31E-33
chr4-735	chr4	3039748	3044821	+	80.7	5073	"intron (NM_001004056, intron 14 of 14)"	"intron (NM_001004056, intron 14 of 14)"	33957	NR_045414	100750326	Hs.575112	NR_045414		HTT-AS	HTT-AS1|HTTAS	HTT antisense RNA (head to head)	ncRNA	80.65	12.62	6.390649762	1.27E-29
chr4-736	chr4	3271794	3272794	+	14.7	1000	Intergenic	Intergenic	21527	NM_001042690	345222	Hs.442291	NM_001012982	ENSG00000188981	MSANTD1	C4orf44	Myb/SANT DNA binding domain containing 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr4-745	chr4	5749307	5750307	+	16	1000	"intron (NM_001306092, intron 7 of 11)"	"intron (NM_001306092, intron 7 of 11)"	36883	NM_001306090	2121	Hs.646899	NM_014556	ENSG00000072840	EVC	DWF-1|EVC1|EVCL	EvC ciliary complex subunit 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr4-749	chr4	6052346	6053970	+	25	1624	"intron (NM_001099433, intron 13 of 20)"	AluSq2|SINE|Alu	-128103	NR_039608	100616201		NR_039608	ENSG00000263631	MIR378D1	mir-378d-1	microRNA 378d-1	ncRNA	24.96	5.82	4.288659794	3.56E-07
chr4-750	chr4	6399045	6400547	+	24.3	1502	"intron (NM_001206995, intron 2 of 9)"	L1ME1|LINE|L1	-16199	NM_181876	5522	Hs.479069	NM_020416	ENSG00000074211	PPP2R2C	B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G	protein phosphatase 2 regulatory subunit Bgamma	protein-coding	24.32	4.37	5.565217391	4.38E-09
chr4-752	chr4	6432795	6433795	+	16.6	1000	"intron (NM_001206995, intron 2 of 9)"	"intron (NM_001206995, intron 2 of 9)"	-10450	NM_001206996	5522	Hs.479069	NM_020416	ENSG00000074211	PPP2R2C	B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G	protein phosphatase 2 regulatory subunit Bgamma	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr4-753	chr4	6468753	6470206	+	22.4	1453	"intron (NM_001206995, intron 2 of 9)"	MLT1K|LTR|ERVL-MaLR	4847	NM_020416	5522	Hs.479069	NM_020416	ENSG00000074211	PPP2R2C	B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G	protein phosphatase 2 regulatory subunit Bgamma	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr4-754	chr4	6526091	6527091	+	16.6	1000	"intron (NM_001206995, intron 2 of 9)"	AluJo|SINE|Alu	30814	NM_001206995	5522	Hs.479069	NM_020416	ENSG00000074211	PPP2R2C	B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G	protein phosphatase 2 regulatory subunit Bgamma	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr4-755	chr4	7094885	7095885	+	16	1000	Intergenic	AluSx1|SINE|Alu	9718	NR_027441	730971	Hs.591718	NR_027441		FLJ36777	-	uncharacterized LOC730971	ncRNA	16	2.91	5.498281787	4.98E-06
chr4-760	chr4	7391263	7395779	+	62.1	4516	"intron (NM_020777, intron 1 of 26)"	MIR3|SINE|MIR	43179	NM_001085382	768239	Hs.662523	NM_001085382	ENSG00000178597	PSAPL1	-	prosaposin-like 1 (gene/pseudogene)	protein-coding	62.09	13.59	4.568800589	4.44E-17
chr4-762	chr4	7531058	7533327	+	39	2269	"intron (NM_020777, intron 2 of 26)"	"intron (NM_020777, intron 2 of 26)"	70437	NR_036238	100422826		NR_036238	ENSG00000266690	MIR4274	-	microRNA 4274	ncRNA	39.04	5.34	7.310861423	2.72E-16
chr4-763	chr4	7751799	7752799	+	14.1	1000	Intergenic	LTR33B|LTR|ERVL	-3518	NR_026892	84740	Hs.663029	NM_032654	ENSG00000272620	AFAP1-AS1	AFAP1-AS|AFAP1AS	AFAP1 antisense RNA 1	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr4-77	chr4	2402470	2404002	+	35.8	1532	"intron (NM_001172657, intron 1 of 6)"	"intron (NM_001172657, intron 1 of 6)"	17134	NM_001172658	57732	Hs.292056	NM_020972	ENSG00000159733	ZFYVE28	LST2|LYST2	zinc finger FYVE-type containing 28	protein-coding	35.84	3.88	9.237113402	5.49E-18
chr4-771	chr4	8592348	8593348	+	16	1000	Intergenic	Intergenic	-1539	NM_001014447	8532	Hs.61995	NM_003652	ENSG00000109625	CPZ	-	carboxypeptidase Z	protein-coding	16	1.94	8.24742268	7.67E-08
chr4-772	chr4	8605029	8606029	+	16	1000	"intron (NM_003652, intron 2 of 9)"	"intron (NM_003652, intron 2 of 9)"	11142	NM_003652	8532	Hs.61995	NM_003652	ENSG00000109625	CPZ	-	carboxypeptidase Z	protein-coding	16	1.94	8.24742268	7.67E-08
chr4-773	chr4	8680497	8681497	+	16.6	1000	Intergenic	Intergenic	86610	NM_003652	8532	Hs.61995	NM_003652	ENSG00000109625	CPZ	-	carboxypeptidase Z	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr4-775	chr4	8884206	8885570	+	22.4	1364	Intergenic	Intergenic	-11345	NM_001306142	3166	Hs.104134	NM_018942	ENSG00000215612	HMX1	H6|NKX5-3	H6 family homeobox 1	protein-coding	22.4	0.97	23.09278351	1.19E-17
chr4-778	chr4	11428619	11431148	+	36.5	2529	"intron (NM_005114, intron 1 of 1)"	"intron (NM_005114, intron 1 of 1)"	654	NM_005114	9957	Hs.507348	NM_005114	ENSG00000002587	HS3ST1	3OST|3OST1	heparan sulfate-glucosamine 3-sulfotransferase 1	protein-coding	36.48	5.82	6.268041237	1.09E-13
chr4-779	chr4	15361399	15362399	+	15.4	1000	"intron (NM_001135170, intron 1 of 2)"	MER82|DNA|TcMar-Tigger	-14276	NM_001135171	114905	Hs.153714	NM_031911	ENSG00000163145	C1QTNF7	CTRP7|ZACRP7	C1q and tumor necrosis factor related protein 7	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr4-783	chr4	24636202	24637202	+	16	1000	Intergenic	AluSq|SINE|Alu	-50518	NM_001358	1665	Hs.696074	NM_001358	ENSG00000109606	DHX15	DBP1|DDX15|HRH2|PRP43|PRPF43|PrPp43p	DEAH-box helicase 15	protein-coding	16	3.4	4.705882353	2.25E-05
chr4-785	chr4	25881568	25882568	+	16	1000	Intergenic	Intergenic	-16851	NM_001297592	23231	Hs.479384	NM_015187	ENSG00000091490	SEL1L3	Sel-1L3	SEL1L family member 3	protein-coding	16	1.94	8.24742268	7.67E-08
chr4-787	chr4	26232079	26233079	+	16	1000	Intergenic	Intergenic	-88753	NM_203283	3516	Hs.479396	NM_005349	ENSG00000168214	RBPJ	AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl	recombination signal binding protein for immunoglobulin kappa J region	protein-coding	16	0.97	16.49484536	3.54E-11
chr4-788	chr4	26257372	26258372	+	16	1000	Intergenic	Intergenic	-63460	NM_203283	3516	Hs.479396	NM_005349	ENSG00000168214	RBPJ	AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl	recombination signal binding protein for immunoglobulin kappa J region	protein-coding	16	2.43	6.58436214	7.90E-07
chr4-789	chr4	27715096	27716096	+	16.6	1000	Intergenic	MLT2B4|LTR|ERVL	496495	NR_125921	101929199	Hs.570815	NR_125921	ENSG00000249699	LOC101929199	-	uncharacterized LOC101929199	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr4-790	chr4	27718109	27721616	+	49.3	3507	Intergenic	MIRb|SINE|MIR	500761	NR_125921	101929199	Hs.570815	NR_125921	ENSG00000249699	LOC101929199	-	uncharacterized LOC101929199	ncRNA	49.29	10.68	4.615168539	5.88E-14
chr4-793	chr4	37136905	37137905	+	16.6	1000	Intergenic	Intergenic	106208	NR_039965	100616435		NR_039965	ENSG00000264319	MIR4801	-	microRNA 4801	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr4-795	chr4	38192125	38193125	+	16.6	1000	Intergenic	Intergenic	71050	NM_001253915	23216	Hs.176503	NM_015173	ENSG00000065882	TBC1D1	TBC|TBC1	TBC1 domain family member 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr4-799	chr4	38678104	38679104	+	16.6	1000	"intron (NM_016531, intron 1 of 5)"	AluSq4|SINE|Alu	-12355	NR_026804	79667	Hs.29725	NM_024614	ENSG00000231160	KLF3-AS1	-	KLF3 antisense RNA 1	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr4-804	chr4	41669353	41672105	+	39	2752	"intron (NM_001330983, intron 11 of 21)"	THE1B|LTR|ERVL-MaLR	55810	NM_001330983	22998	Hs.335163	NM_014988	ENSG00000064042	LIMCH1	LIMCH1A|LMO7B	LIM and calponin homology domains 1	protein-coding	39.04	6.8	5.741176471	1.26E-13
chr4-812	chr4	54965045	54967155	+	32	2110	promoter-TSS (NM_133267)	promoter-TSS (NM_133267)	-148	NM_133267	170825	Hs.371899	NM_133267	ENSG00000180613	GSX2	GSH2	GS homeobox 2	protein-coding	32	3.88	8.24742268	3.92E-15
chr4-813	chr4	56695793	56696793	+	16	1000	"intron (NR_003935, intron 1 of 2)"	"intron (NR_003935, intron 1 of 2)"	10056	NR_003935	644145	Hs.570825	NR_003935		LOC644145	-	exocyst complex component 1 pseudogene	pseudo	16	3.88	4.12371134	7.91E-05
chr4-814	chr4	58203804	58204804	+	16	1000	Intergenic	Intergenic	-87734	NR_125907	101928851	Hs.555072	NR_125907	ENSG00000248505	LOC101928851	-	uncharacterized LOC101928851	ncRNA	16	2.91	5.498281787	4.98E-06
chr4-817	chr4	77489820	77490820	+	16.6	1000	"intron (NM_020859, intron 2 of 10)"	"intron (NM_020859, intron 2 of 10)"	-4401	NR_039654	100616299		NR_039654	ENSG00000263445	MIR4450	mir-4450	microRNA 4450	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr4-828	chr4	111536500	111537500	+	16.6	1000	Intergenic	Intergenic	7254	NM_000325	5308	Hs.643588	NM_000325	ENSG00000164093	PITX2	ARP1|Brx1|IDG2|IGDS|IGDS2|IHG2|IRID2|Otlx2|PTX2|RGS|RIEG|RIEG1|RS	paired like homeodomain 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr4-829	chr4	112913474	112914474	+	16	1000	Intergenic	Intergenic	-152579	NM_152400	132720	Hs.23439	NM_152400	ENSG00000174749	C4orf32	-	chromosome 4 open reading frame 32	protein-coding	16	0.97	16.49484536	3.54E-11
chr4-842	chr4	139352797	139353797	+	16.6	1000	Intergenic	L1PA8|LINE|L1	122432	NR_051987	100874047	Hs.570848	NR_051987	ENSG00000251372	LINC00499	-	long intergenic non-protein coding RNA 499	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr4-844	chr4	139799032	139800032	+	16.6	1000	"intron (NR_133945, intron 2 of 2)"	"intron (NR_133945, intron 2 of 2)"	134268	NR_133945	105377448	Hs.200280	NR_133945	ENSG00000250195	LOC105377448	-	uncharacterized LOC105377448	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr4-845	chr4	140945214	140946214	+	16.6	1000	"intron (NM_018717, intron 1 of 5)"	AluYc|SINE|Alu	129519	NM_018717	55534	Hs.586165	NM_018717	ENSG00000196782	MAML3	CAGH3|ERDA3|GDN|MAM-2|MAM2|TNRC3	mastermind like transcriptional coactivator 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr4-848	chr4	141418244	141420933	+	39.7	2689	promoter-TSS (NM_001277353)	promoter-TSS (NM_001277353)	-57	NM_001277353	152586	Hs.189067	NM_001034840	ENSG00000205301	MGAT4D	GnT1IP	MGAT4 family member D	protein-coding	39.69	5.34	7.43258427	3.64E-17
chr4-851	chr4	141675839	141679203	+	57.6	3364	promoter-TSS (NM_015130)	promoter-TSS (NM_015130)	-50	NM_015130	23158	Hs.480819	NM_015130	ENSG00000109436	TBC1D9	GRAMD9|MDR1	TBC1 domain family member 9	protein-coding	57.61	5.34	10.78838951	1.15E-30
chr4-854	chr4	148078706	148080246	+	23.7	1540	Intergenic	Intergenic	-212438	NM_031956	83894	Hs.378893	NM_031956	ENSG00000137473	TTC29	NYD-SP14|TBPP2A	tetratricopeptide repeat domain 29	protein-coding	23.68	3.4	6.964705882	5.45E-10
chr4-861	chr4	170951667	170952667	+	16.6	1000	TTS (NR_125890)	TTS (NR_125890)	2012	NR_125890	9848	Hs.593942	NM_021647	ENSG00000198948	MFAP3L	NYD-sp9	microfibrillar associated protein 3 like	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr4-862	chr4	173761329	173762329	+	16	1000	"intron (NM_001034845, intron 7 of 12)"	L2a|LINE|L2	-113800	NR_125894	101928314	Hs.566023	NR_125894		LOC101928314	-	uncharacterized LOC101928314	ncRNA	16	3.88	4.12371134	7.91E-05
chr4-864	chr4	174870719	174871719	+	16	1000	Intergenic	Intergenic	270330	NR_125896	101928509	Hs.147719	NR_125896	ENSG00000248174	LOC101928509	-	uncharacterized LOC101928509	ncRNA	16	2.91	5.498281787	4.98E-06
chr4-867	chr4	175134683	175135683	+	16.6	1000	"intron (NR_125896, intron 1 of 4)"	"intron (NR_125896, intron 1 of 4)"	6366	NR_125896	101928509	Hs.147719	NR_125896	ENSG00000248174	LOC101928509	-	uncharacterized LOC101928509	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr4-868	chr4	175138540	175139540	+	16.6	1000	"intron (NR_125896, intron 1 of 4)"	"intron (NR_125896, intron 1 of 4)"	2509	NR_125896	101928509	Hs.147719	NR_125896	ENSG00000248174	LOC101928509	-	uncharacterized LOC101928509	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr4-870	chr4	180979446	180981138	+	25	1692	Intergenic	CpG	1100010	NR_033918	728081	Hs.535735	NR_033918	ENSG00000248197	LINC00290	NCRNA00290	long intergenic non-protein coding RNA 290	ncRNA	24.96	1.94	12.86597938	5.33E-15
chr4-876	chr4	184950065	184951065	+	16	1000	Intergenic	Intergenic	124056	NM_020225	56977	Hs.21958	NM_020225	ENSG00000173320	STOX2	-	storkhead box 2	protein-coding	16	0.97	16.49484536	3.54E-11
chr4-880	chr4	185924911	185925911	+	16	1000	Intergenic	MLT2D|LTR|ERVL	-14584	NM_001300781	391723	Hs.531242	NM_001029887	ENSG00000187821	HELT	HCM1228|HESL|Mgn|bHLHb44	helt bHLH transcription factor	protein-coding	16	2.91	5.498281787	4.98E-06
chr4-882	chr4	185932394	185934051	+	23	1657	Intergenic	Intergenic	-6773	NM_001300781	391723	Hs.531242	NM_001029887	ENSG00000187821	HELT	HCM1228|HESL|Mgn|bHLHb44	helt bHLH transcription factor	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr4-888	chr4	186641226	186642489	+	17.9	1263	"intron (NM_001145672, intron 1 of 20)"	"intron (NM_001145672, intron 1 of 20)"	55209	NM_001145673	8470	Hs.481342	NM_003603	ENSG00000154556	SORBS2	ARGBP2|PRO0618	sorbin and SH3 domain containing 2	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr4-906	chr4	2385429	2386429	+	16	1000	"intron (NM_001172657, intron 1 of 6)"	"intron (NM_001172657, intron 1 of 6)"	-19325	NM_001172659	57732	Hs.292056	NM_020972	ENSG00000159733	ZFYVE28	LST2|LYST2	zinc finger FYVE-type containing 28	protein-coding	16	3.4	4.705882353	2.25E-05
chr4-923	chr4	4855596	4856596	+	16	1000	Intergenic	Intergenic	-5296	NM_002448	4487	Hs.424414	NM_002448	ENSG00000163132	MSX1	ECTD3|HOX7|HYD1|STHAG1	msh homeobox 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr4-924	chr4	4870749	4874473	+	51.2	3724	Intergenic	Intergenic	11219	NM_002448	4487	Hs.424414	NM_002448	ENSG00000163132	MSX1	ECTD3|HOX7|HYD1|STHAG1	msh homeobox 1	protein-coding	51.21	7.77	6.590733591	6.93E-20
chr4-932	chr4	6076214	6077214	+	15.4	1000	"intron (NM_001306133, intron 8 of 12)"	Tigger3a|DNA|TcMar-Tigger	119632	NM_001306133	152789	Hs.479066	NM_144720	ENSG00000152969	JAKMIP1	Gababrbp|JAMIP1|MARLIN1	janus kinase and microtubule interacting protein 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr4-934	chr4	6348985	6349985	+	14.1	1000	"intron (NM_020416, intron 6 of 8)"	"intron (NM_020416, intron 6 of 8)"	34112	NM_181876	5522	Hs.479069	NM_020416	ENSG00000074211	PPP2R2C	B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G	protein phosphatase 2 regulatory subunit Bgamma	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr4-939	chr4	6552589	6553589	+	15.4	1000	"intron (NM_001206994, intron 1 of 9)"	"intron (NM_001206994, intron 1 of 9)"	4316	NM_001206995	5522	Hs.479069	NM_020416	ENSG00000074211	PPP2R2C	B55-GAMMA|IMYPNO|IMYPNO1|PR52|PR55G	protein phosphatase 2 regulatory subunit Bgamma	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr4-943	chr4	7199496	7200779	+	17.9	1283	"intron (NM_020777, intron 1 of 26)"	"intron (NM_020777, intron 1 of 26)"	5763	NM_020777	57537	Hs.479099	NM_020777	ENSG00000184985	SORCS2	-	sortilin related VPS10 domain containing receptor 2	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr4-944	chr4	7222778	7223778	+	14.7	1000	"intron (NM_020777, intron 1 of 26)"	"intron (NM_020777, intron 1 of 26)"	28904	NM_020777	57537	Hs.479099	NM_020777	ENSG00000184985	SORCS2	-	sortilin related VPS10 domain containing receptor 2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr4-954	chr4	7511555	7512922	+	18.6	1367	"intron (NM_020777, intron 2 of 26)"	CpG	50483	NR_036238	100422826		NR_036238	ENSG00000266690	MIR4274	-	microRNA 4274	ncRNA	18.56	0.97	19.13402062	1.12E-13
chr4-956	chr4	7675905	7677186	+	21.1	1281	"intron (NM_020777, intron 8 of 26)"	"intron (NM_020777, intron 8 of 26)"	-79272	NR_026892	84740	Hs.663029	NM_032654	ENSG00000272620	AFAP1-AS1	AFAP1-AS|AFAP1AS	AFAP1 antisense RNA 1	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr4-957	chr4	7705079	7706079	+	14.7	1000	"intron (NM_020777, intron 13 of 26)"	"intron (NM_020777, intron 13 of 26)"	-50238	NR_026892	84740	Hs.663029	NM_032654	ENSG00000272620	AFAP1-AS1	AFAP1-AS|AFAP1AS	AFAP1 antisense RNA 1	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr4-96	chr4	77912716	77914582	+	38.4	1866	"intron (NM_001306147, intron 2 of 11)"	MIR|SINE|MIR	42782	NM_018243	55752	Hs.128199	NM_018243	ENSG00000138758	11-Sep	-	septin 11	protein-coding	38.4	6.31	6.085578447	1.96E-14
chr4-961	chr4	7850780	7851780	+	15.4	1000	"intron (NM_001134647, intron 4 of 17)"	"intron (NM_001134647, intron 4 of 17)"	-89448	NM_203423	389199	Hs.375210	NM_203423		LOC389199	-	uncharacterized LOC389199	protein-coding	15.36	0	15.82260557	1.26E-14
chr4-962	chr4	7897347	7898347	+	15.4	1000	"intron (NM_001134647, intron 1 of 17)"	AluSp|SINE|Alu	-42881	NM_203423	389199	Hs.375210	NM_203423		LOC389199	-	uncharacterized LOC389199	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr4-966	chr4	7979614	7981824	+	30.7	2210	"intron (NM_001130083, intron 20 of 20)"	"intron (NM_001130083, intron 20 of 20)"	26389	NR_029511	407052		NR_029511	ENSG00000207807	MIR95	MIRN95|hsa-mir-95|miR-95	microRNA 95	ncRNA	30.72	1.46	21.04109589	1.19E-23
chr4-970	chr4	8653368	8654368	+	16	1000	Intergenic	Intergenic	59481	NM_003652	8532	Hs.61995	NM_003652	ENSG00000109625	CPZ	-	carboxypeptidase Z	protein-coding	16	0.97	16.49484536	3.54E-11
chr4-972	chr4	8699868	8703027	+	40.3	3159	Intergenic	Intergenic	107060	NM_003652	8532	Hs.61995	NM_003652	ENSG00000109625	CPZ	-	carboxypeptidase Z	protein-coding	40.33	6.8	5.930882353	2.14E-14
chr4-973	chr4	8909081	8912081	+	47.4	3000	Intergenic	CpG	-37038	NM_001306142	3166	Hs.104134	NM_018942	ENSG00000215612	HMX1	H6|NKX5-3	H6 family homeobox 1	protein-coding	47.37	7.77	6.096525097	1.86E-17
chr4-975	chr4	9375548	9376548	+	14.7	1000	Intergenic	Intergenic	6448	NR_027279	391622	Hs.722658	NR_027279	ENSG00000205946	USP17L6P	DUB4|USP17L6|vDUB4	"ubiquitin specific peptidase 17-like family member 6, pseudogene"	pseudo	14.72	0.97	15.17525773	5.60E-10
chr4-979	chr4	10636883	10637883	+	16	1000	"intron (NM_052964, intron 2 of 18)"	MIRb|SINE|MIR	49003	NM_052964	116449	Hs.678910	NM_052964	ENSG00000109684	CLNK	MIST	cytokine dependent hematopoietic cell linker	protein-coding	16	3.88	4.12371134	7.91E-05
chr4-993	chr4	25946413	25947413	+	15.4	1000	Intergenic	L1MC5|LINE|L1	31099	NM_001145432	389203	Hs.479386	NM_001145432	ENSG00000250317	SMIM20	C4orf52|MITRAC7	small integral membrane protein 20	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr4-994	chr4	26117098	26118396	+	23.7	1298	Intergenic	Intergenic	201933	NM_001145432	389203	Hs.479386	NM_001145432	ENSG00000250317	SMIM20	C4orf52|MITRAC7	small integral membrane protein 20	protein-coding	23.68	1.94	12.20618557	6.71E-14
chr4-999	chr4	27735105	27736481	+	21.1	1376	Intergenic	HERV16-int|LTR|ERVL	516692	NR_125921	101929199	Hs.570815	NR_125921	ENSG00000249699	LOC101929199	-	uncharacterized LOC101929199	ncRNA	21.12	3.4	6.211764706	2.41E-08
chr5-1000	chr5	72303063	72304063	+	16.6	1000	"intron (NM_001146032, intron 6 of 24)"	L2c|LINE|L2	51755	NM_001146032	115548	Hs.165762	NM_138782	ENSG00000157107	FCHO2	-	FCH domain only 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr5-1005	chr5	72611102	72612622	+	21.8	1520	Intergenic	AluJr|SINE|Alu	-114074	NR_134291	340090	Hs.434311	NR_134291		LOC340090	-	uncharacterized LOC340090	ncRNA	21.76	4.37	4.979405034	1.32E-07
chr5-1012	chr5	73194838	73195838	+	16.6	1000	"intron (NM_001244364, intron 22 of 27)"	"intron (NM_001244364, intron 22 of 27)"	85995	NM_001244364	64283	Hs.482521	NM_001080479	ENSG00000214944	ARHGEF28	RGNEF|RIP2|p190RHOGEF	Rho guanine nucleotide exchange factor 28	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr5-1013	chr5	73403092	73404092	+	14.1	1000	Intergenic	Intergenic	200558	NR_105009	102503429	Hs.519391	NR_105009	ENSG00000248942	LINC01335	-	long intergenic non-protein coding RNA 1335	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr5-1014	chr5	73422911	73423911	+	16.6	1000	Intergenic	Intergenic	180739	NR_105009	102503429	Hs.519391	NR_105009	ENSG00000248942	LINC01335	-	long intergenic non-protein coding RNA 1335	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr5-1016	chr5	73853698	73854698	+	16	1000	Intergenic	GA-rich|Low_complexity|Low_complexity	-21397	NR_126354	104310351	Hs.582291	NR_126354	ENSG00000248673	LINC01331	-	long intergenic non-protein coding RNA 1331	ncRNA	16	1.94	8.24742268	7.67E-08
chr5-1017	chr5	75364638	75365998	+	23	1360	Intergenic	Intergenic	-13921	NM_014979	22987	Hs.646953	NM_014979	ENSG00000122012	SV2C	-	synaptic vesicle glycoprotein 2C	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr5-1018	chr5	75550142	75551142	+	16.6	1000	"intron (NM_001297716, intron 4 of 12)"	L1ME4a|LINE|L1	-148438	NM_006633	10788	Hs.291030	NM_006633	ENSG00000145703	IQGAP2	-	IQ motif containing GTPase activating protein 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr5-1019	chr5	76505312	76506312	+	14.7	1000	promoter-TSS (NM_001029851)	promoter-TSS (NM_001029851)	-894	NM_001029851	8622	Hs.584830	NM_003719	ENSG00000113231	PDE8B	ADSD|PPNAD3	phosphodiesterase 8B	protein-coding	14.72	0	15.16333034	3.99E-13
chr5-1020	chr5	76941784	76942784	+	16.6	1000	Intergenic	L2c|LINE|L2	-7762	NM_032109	23440	Hs.202247	NM_032109	ENSG00000171540	OTP	-	orthopedia homeobox	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr5-1023	chr5	92925588	92926588	+	15.4	1000	"intron (NM_005654, intron 2 of 2)"	"intron (NM_005654, intron 2 of 2)"	7045	NM_005654	7025	Hs.519445	NM_005654	ENSG00000175745	NR2F1	BBOAS|BBSOAS|COUP-TFI|EAR-3|EAR3|ERBAL3|NR2F2|SVP44|TCFCOUP1|TFCOUP1	nuclear receptor subfamily 2 group F member 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-1033	chr5	113024776	113025776	+	16	1000	Intergenic	Intergenic	175917	NM_022828	64848	Hs.231942	NM_022828	ENSG00000047188	YTHDC2	CAHL	YTH domain containing 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr5-1042	chr5	132164326	132167514	+	60.2	3188	"intron (NM_001172700, intron 1 of 9)"	CpG	670	NM_001172700	134549	Hs.519574	NM_133456	ENSG00000164403	SHROOM1	APXL2	shroom family member 1	protein-coding	60.17	8.74	6.884439359	7.80E-24
chr5-1044	chr5	132722699	132724228	+	23	1529	"intron (NM_015082, intron 4 of 15)"	"intron (NM_015082, intron 4 of 15)"	39935	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA	23.04	5.34	4.314606742	4.49E-07
chr5-1047	chr5	132757842	132758842	+	15.4	1000	"intron (NM_015082, intron 3 of 15)"	L2a|LINE|L2	5056	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr5-1053	chr5	133092458	133093747	+	21.1	1289	Intergenic	MER33|DNA|hAT-Charlie	-144879	NM_015082	23105	Hs.483390	NM_015082	ENSG00000053108	FSTL4	-	follistatin like 4	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr5-1054	chr5	133178210	133179210	+	16	1000	Intergenic	Intergenic	-70658	NR_131252	105664404	Hs.582536	NR_131252	ENSG00000249073	WSPAR	LncTCF7|TCONS_00009511	WNT signaling pathway activating non-coding RNA	ncRNA	16	0	16.4818808	1.26E-14
chr5-1055	chr5	133201242	133203898	+	45.4	2656	Intergenic	Intergenic	-46798	NR_131252	105664404	Hs.582536	NR_131252	ENSG00000249073	WSPAR	LncTCF7|TCONS_00009511	WNT signaling pathway activating non-coding RNA	ncRNA	45.45	8.25	5.509090909	3.94E-15
chr5-1057	chr5	133218276	133219726	+	21.1	1450	Intergenic	Intergenic	-30367	NR_131252	105664404	Hs.582536	NR_131252	ENSG00000249073	WSPAR	LncTCF7|TCONS_00009511	WNT signaling pathway activating non-coding RNA	ncRNA	21.12	3.88	5.443298969	1.44E-07
chr5-1060	chr5	134378388	134379388	+	15.4	1000	"intron (NM_001277348, intron 1 of 5)"	"intron (NM_001277348, intron 1 of 5)"	-3151	NR_105050	101927953	Hs.436898	NR_105049	ENSG00000249082	C5orf66-AS1	CTC-276P9.1|Epist	C5orf66 antisense RNA 1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr5-1064	chr5	134637657	134638657	+	16	1000	"intron (NM_001277348, intron 3 of 5)"	L1ME1|LINE|L1	-54290	NR_037895	340073	Hs.434422	NR_037895	ENSG00000249647	C5orf66-AS2	-	C5orf66 antisense RNA 2	ncRNA	16	3.4	4.705882353	2.25E-05
chr5-1065	chr5	134791860	134792860	+	16.6	1000	Intergenic	Intergenic	-4271	NM_001099221	497189	Hs.552091	NM_001099221	ENSG00000255833	TIFAB	-	TIFA inhibitor	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr5-1066	chr5	134808492	134809945	+	22.4	1453	Intergenic	MLT1I|LTR|ERVL-MaLR	-21129	NM_001099221	497189	Hs.552091	NM_001099221	ENSG00000255833	TIFAB	-	TIFA inhibitor	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr5-1070	chr5	134922224	134923224	+	14.7	1000	Intergenic	AluJb|SINE|Alu	-7755	NM_004887	9547	Hs.483444	NM_004887	ENSG00000145824	CXCL14	BMAC|BRAK|KEC|KS1|MIP-2g|MIP2G|NJAC|SCYB14	C-X-C motif chemokine ligand 14	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr5-1072	chr5	135204794	135205794	+	16.6	1000	"intron (NM_145282, intron 4 of 4)"	"intron (NM_145282, intron 4 of 4)"	26222	NM_000590	3578	Hs.960	NM_000590	ENSG00000145839	IL9	HP40|IL-9|P40	interleukin 9	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr5-1074	chr5	135331293	135332825	+	23.7	1532	Intergenic	Intergenic	-32525	NM_000358	7045	Hs.369397	NM_000358	ENSG00000120708	TGFBI	BIGH3|CDB1|CDG2|CDGG1|CSD|CSD1|CSD2|CSD3|EBMD|LCD1	transforming growth factor beta induced	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr5-1075	chr5	135406956	135407956	+	15.4	1000	Intergenic	THE1B|LTR|ERVL-MaLR	8831	NR_030583	100126299		NR_030583	ENSG00000270123	VTRNA2-1	CBL-3|CBL3|MIR886|MIRN886|VTRNA2|hsa-mir-886|hvg-5|nc886|svtRNA2-1a	vault RNA 2-1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr5-1078	chr5	137966627	137967627	+	16.6	1000	Intergenic	Intergenic	-55809	NM_004134	3313	Hs.184233	NM_004134	ENSG00000113013	HSPA9	CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4	heat shock protein family A (Hsp70) member 9	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr5-1083	chr5	138009795	138011612	+	28.8	1817	Intergenic	MIRb|SINE|MIR	78295	NR_134245	105379194	Hs.445981	NR_134244	ENSG00000253404	LOC105379194	-	uncharacterized LOC105379194	ncRNA	28.8	5.34	5.393258427	7.39E-10
chr5-1086	chr5	139169727	139170727	+	16.6	1000	Intergenic	L2a|LINE|L2	-5179	NM_032289	84249	Hs.21963	NM_032289	ENSG00000146005	PSD2	EFA6C	pleckstrin and Sec7 domain containing 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr5-1087	chr5	139173847	139175696	+	32	1849	promoter-TSS (NM_032289)	promoter-TSS (NM_032289)	-635	NM_032289	84249	Hs.21963	NM_032289	ENSG00000146005	PSD2	EFA6C	pleckstrin and Sec7 domain containing 2	protein-coding	32	1.94	16.49484536	5.00E-22
chr5-1091	chr5	139203301	139204783	+	24.3	1482	"intron (NM_032289, intron 7 of 14)"	AluY|SINE|Alu	28636	NM_032289	84249	Hs.21963	NM_032289	ENSG00000146005	PSD2	EFA6C	pleckstrin and Sec7 domain containing 2	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr5-1094	chr5	139247734	139248996	+	16.6	1262	"intron (NM_013982, intron 4 of 10)"	"intron (NM_013982, intron 4 of 10)"	72959	NM_032289	84249	Hs.21963	NM_032289	ENSG00000146005	PSD2	EFA6C	pleckstrin and Sec7 domain containing 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr5-1096	chr5	139404734	139405734	+	16	1000	"intron (NM_013983, intron 1 of 10)"	"intron (NM_013983, intron 1 of 10)"	17650	NM_004883	9542	Hs.408515	NM_004883	ENSG00000158458	NRG2	DON1|HRG2|NTAK	neuregulin 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr5-110	chr5	50259110	50262894	+	67.8	3784	Intergenic	Intergenic	5019	NR_104653	100287592	Hs.519298	NR_104653	ENSG00000251573	LINC02106	-	long intergenic non-protein coding RNA 2106	ncRNA	67.85	14.56	4.660027473	3.13E-19
chr5-1102	chr5	141127523	141128523	+	15.4	1000	Intergenic	Intergenic	-66223	NM_022481	64411	Hs.726187	NM_022481	ENSG00000120318	ARAP3	CENTD3|DRAG1	"ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1106	chr5	141207199	141208199	+	15.4	1000	Intergenic	Intergenic	38068	NM_001278615	5097	Hs.79769	NM_002587	ENSG00000156453	PCDH1	PC42|PCDH42	protocadherin 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-1107	chr5	141249789	141251506	+	26.2	1717	"intron (NM_002587, intron 1 of 2)"	"intron (NM_002587, intron 1 of 2)"	-1455	NM_001278613	5097	Hs.79769	NM_002587	ENSG00000156453	PCDH1	PC42|PCDH42	protocadherin 1	protein-coding	26.24	3.88	6.762886598	1.00E-10
chr5-1108	chr5	141963464	141964464	+	15.4	1000	Intergenic	AluSz|SINE|Alu	29762	NM_033137	2246	Hs.483635	NM_000800	ENSG00000113578	FGF1	AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1	fibroblast growth factor 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-1112	chr5	142104626	142105626	+	16	1000	Intergenic	MLT1B|LTR|ERVL-MaLR	-20039	NR_110558	101926975	Hs.638583	NR_110558	ENSG00000236714	LINC01844	-	long intergenic non-protein coding RNA 1844	ncRNA	16	3.88	4.12371134	7.91E-05
chr5-1113	chr5	142115954	142116954	+	16.6	1000	Intergenic	MamGypLTR1b|LTR|Gypsy	-8711	NR_110558	101926975	Hs.638583	NR_110558	ENSG00000236714	LINC01844	-	long intergenic non-protein coding RNA 1844	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr5-1116	chr5	145738931	145739931	+	16.6	1000	Intergenic	HAL1|LINE|L1	20844	NM_002700	5459	Hs.553499	NM_002700	ENSG00000091010	POU4F3	BRN3C|DFNA15|DFNA42|DFNA52	POU class 4 homeobox 3	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr5-1117	chr5	145942042	145943042	+	16.6	1000	Intergenic	Intergenic	-46866	NM_194251	134391	Hs.483732	NM_194251	ENSG00000173250	GPR151	GALR4|GALRL|GPCR|PGR7	G protein-coupled receptor 151	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr5-1120	chr5	146340101	146341101	+	16.6	1000	"intron (NM_001271900, intron 2 of 10)"	"intron (NM_001271900, intron 2 of 10)"	-41532	NR_047115	100874361	Hs.193825	NR_047115	ENSG00000249553	PPP2R2B-IT1	-	PPP2R2B intronic transcript 1	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr5-1124	chr5	148194154	148195404	+	18.6	1250	Intergenic	MIRc|SINE|MIR	-11377	NM_000024	154	Hs.2551	NM_000024	ENSG00000169252	ADRB2	ADRB2R|ADRBR|B2AR|BAR|BETA2AR	adrenoceptor beta 2	protein-coding	18.56	0	19.11898173	9.96E-18
chr5-1125	chr5	148534071	148535071	+	16.6	1000	"intron (NM_014945, intron 2 of 23)"	"intron (NM_014945, intron 2 of 23)"	13561	NM_001345860	22885	Hs.49688	NM_014945	ENSG00000173210	ABLIM3	HMFN1661	actin binding LIM protein family member 3	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr5-1126	chr5	148661596	148662596	+	16	1000	"intron (NM_001146337, intron 1 of 17)"	MER58A|DNA|hAT-Charlie	10695	NM_152406	134265	Hs.62930	NM_152406	ENSG00000157510	AFAP1L1	-	actin filament associated protein 1 like 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr5-1127	chr5	148767928	148768928	+	16	1000	"intron (NM_001317987, intron 1 of 2)"	MIRb|SINE|MIR	-9590	NM_014443	27190	Hs.156979	NM_014443	ENSG00000127743	IL17B	IL-17B|IL-20|NIRF|ZCYTO7	interleukin 17B	protein-coding	16	1.94	8.24742268	7.67E-08
chr5-1128	chr5	148983460	148984460	+	16.6	1000	"intron (NM_001001669, intron 3 of 12)"	MER53|DNA|hAT	22825	NM_001001669	389337	Hs.256206	NM_001001669	ENSG00000183111	ARHGEF37	-	Rho guanine nucleotide exchange factor 37	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr5-1130	chr5	149596170	149597502	+	22.4	1332	Intergenic	Intergenic	27412	NM_014228	6534	Hs.241597	NM_014228	ENSG00000011083	SLC6A7	PROT	solute carrier family 6 member 7	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr5-1134	chr5	149911885	149913152	+	20.5	1267	"exon (NM_001301063, exon 4 of 14)"	"exon (NM_001301063, exon 4 of 14)"	24844	NM_001543	3340	Hs.222055	NM_001543	ENSG00000070614	NDST1	HSST|MRT46|NST1	N-deacetylase and N-sulfotransferase 1	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr5-1135	chr5	149916930	149917930	+	16	1000	"intron (NM_001543, intron 6 of 14)"	MER11C|LTR|ERVK	29756	NM_001543	3340	Hs.222055	NM_001543	ENSG00000070614	NDST1	HSST|MRT46|NST1	N-deacetylase and N-sulfotransferase 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr5-1138	chr5	150723537	150724537	+	14.7	1000	"intron (NM_181776, intron 1 of 9)"	MIR|SINE|MIR	3114	NM_181776	153201	Hs.483877	NM_181776	ENSG00000186335	SLC36A2	PAT2|TRAMD1	solute carrier family 36 member 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr5-1142	chr5	151011500	151012500	+	16.6	1000	Intergenic	Intergenic	-44506	NR_109873	101927096	Hs.571023	NR_109873	ENSG00000249035	CTB-113P19.1	-	uncharacterized LOC101927096	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr5-1143	chr5	151525757	151526757	+	16	1000	"intron (NR_109876, intron 1 of 2)"	THE1C|LTR|ERVL-MaLR	187798	NR_109876	101927115	Hs.549665	NR_109876	ENSG00000254226	LINC01933	CTB-12O2.1	long intergenic non-protein coding RNA 1933	ncRNA	16	2.91	5.498281787	4.98E-06
chr5-1154	chr5	157072420	157073678	+	17.3	1258	"intron (NM_001308165, intron 4 of 5)"	"intron (NM_001308165, intron 4 of 5)"	6379	NM_007017	11063	Hs.529462	NM_007017	ENSG00000039600	SOX30	-	SRY-box 30	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr5-1156	chr5	157483339	157487089	+	48	3750	Intergenic	LTR16A2|LTR|ERVL	-199031	NM_001195556	9685	Hs.644000	NM_014666	ENSG00000113282	CLINT1	CLINT|ENTH|EPN4|EPNR	clathrin interactor 1	protein-coding	48.01	6.8	7.060294118	2.78E-19
chr5-1161	chr5	157627021	157628021	+	16	1000	Intergenic	Intergenic	209260	NR_109888	101927697	Hs.483960	NR_109888	ENSG00000276778	LOC101927697	-	uncharacterized LOC101927697	ncRNA	16	2.43	6.58436214	7.90E-07
chr5-1162	chr5	158223439	158224439	+	16	1000	"intron (NM_001324107, intron 8 of 15)"	"intron (NM_001324107, intron 8 of 15)"	302831	NM_001324101	1879	Hs.573143	NM_024007	ENSG00000164330	EBF1	COE1|EBF|O/E-1|OLF1	early B-cell factor 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr5-1164	chr5	158374947	158375947	+	16	1000	"intron (NM_182708, intron 5 of 14)"	"intron (NM_182708, intron 5 of 14)"	151323	NM_001324101	1879	Hs.573143	NM_024007	ENSG00000164330	EBF1	COE1|EBF|O/E-1|OLF1	early B-cell factor 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr5-1167	chr5	158524547	158525547	+	16.6	1000	"intron (NM_001324101, intron 1 of 16)"	"intron (NM_001324101, intron 1 of 16)"	1723	NM_001324101	1879	Hs.573143	NM_024007	ENSG00000164330	EBF1	COE1|EBF|O/E-1|OLF1	early B-cell factor 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr5-1168	chr5	158739818	158741538	+	27.5	1720	Intergenic	Intergenic	16803	NM_002187	3593	Hs.674	NM_002187	ENSG00000113302	IL12B	CLMF|CLMF2|IL-12B|IMD28|IMD29|NKSF|NKSF2	interleukin 12B	protein-coding	27.52	5.82	4.728522337	1.71E-08
chr5-1170	chr5	159351466	159352466	+	16	1000	"intron (NM_000679, intron 1 of 1)"	MIRb|SINE|MIR	8226	NM_000679	147	Hs.368632	NM_000679	ENSG00000170214	ADRA1B	ADRA1|ALPHA1BAR	adrenoceptor alpha 1B	protein-coding	16	2.43	6.58436214	7.90E-07
chr5-1171	chr5	159379414	159380715	+	17.9	1301	"intron (NM_000679, intron 1 of 1)"	"intron (NM_000679, intron 1 of 1)"	36324	NM_000679	147	Hs.368632	NM_000679	ENSG00000170214	ADRA1B	ADRA1|ALPHA1BAR	adrenoceptor alpha 1B	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr5-1174	chr5	167532356	167533873	+	23.7	1517	"intron (NM_001080428, intron 6 of 24)"	"intron (NM_001080428, intron 6 of 24)"	126263	NR_109894	101927862	Hs.659376	NR_109894	ENSG00000253978	CTB-178M22.2	-	uncharacterized LOC101927862	ncRNA	23.68	4.37	5.418764302	2.46E-08
chr5-1175	chr5	167781659	167782659	+	14.7	1000	"intron (NM_015238, intron 1 of 22)"	L2b|LINE|L2	63094	NM_001161662	23286	Hs.484047	NM_015238	ENSG00000113645	WWC1	HBEBP3|HBEBP36|KIBRA|MEMRYQTL|PPP1R168	WW and C2 domain containing 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr5-1176	chr5	168125960	168127240	+	22.4	1280	"intron (NM_003062, intron 27 of 35)"	"intron (NM_003062, intron 27 of 35)"	-7332	NR_130737	101927969	Hs.661903	NR_130737		LOC101927969	-	uncharacterized LOC101927969	ncRNA	22.4	3.88	5.773195876	2.53E-08
chr5-1177	chr5	168140728	168141728	+	15.4	1000	"intron (NR_130737, intron 5 of 6)"	"intron (NR_130737, intron 5 of 6)"	7296	NR_130737	101927969	Hs.661903	NR_130737		LOC101927969	-	uncharacterized LOC101927969	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr5-1178	chr5	168248763	168249763	+	16.6	1000	"intron (NM_003062, intron 7 of 35)"	MIRb|SINE|MIR	-54003	NR_029632	407001		NR_029632	ENSG00000207739	MIR218-2	MIRN218-2|mir-218-2	microRNA 218-2	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr5-1179	chr5	168294455	168295455	+	15.4	1000	"intron (NM_003062, intron 5 of 35)"	"intron (NM_003062, intron 5 of 35)"	-99695	NR_029632	407001		NR_029632	ENSG00000207739	MIR218-2	MIRN218-2|mir-218-2	microRNA 218-2	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr5-1180	chr5	168328804	168329804	+	16.6	1000	"intron (NM_003062, intron 4 of 35)"	L2b|LINE|L2	-110928	NR_109897	728095	Hs.145601	NR_109897		LOC728095	-	uncharacterized LOC728095	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr5-1184	chr5	169528416	169530379	+	31.4	1963	Intergenic	Intergenic	-3520	NM_012188	2299	Hs.87236	NM_012188	ENSG00000168269	FOXI1	FKH10|FKHL10|FREAC-6|FREAC6|HFH-3|HFH3	forkhead box I1	protein-coding	31.36	3.88	8.082474227	3.25E-14
chr5-1187	chr5	169622841	169623841	+	14.7	1000	"intron (NR_108022, intron 3 of 4)"	"intron (NR_108022, intron 3 of 4)"	2804	NR_108022	100507267	Hs.634846	NR_108022		LINC01187	CTB-27N1.1|KIDR	long intergenic non-protein coding RNA 1187	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr5-1191	chr5	169870037	169871037	+	16.6	1000	"intron (NM_001034838, intron 1 of 7)"	L3|LINE|CR1	-53856	NM_004137	3779	Hs.484099	NM_004137	ENSG00000145936	KCNMB1	BKbeta1|K(VCA)beta|SLO-BETA|hbeta1|hslo-beta|k(VCA)beta-1|slo-beta-1	potassium calcium-activated channel subfamily M regulatory beta subunit 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr5-1192	chr5	169979468	169980468	+	14.7	1000	"intron (NM_014592, intron 1 of 7)"	"intron (NM_014592, intron 1 of 7)"	48928	NM_001278340	30820	Hs.484111	NM_014592	ENSG00000182132	KCNIP1	KCHIP1|VABP	potassium voltage-gated channel interacting protein 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr5-1193	chr5	169999486	170000486	+	15.4	1000	"intron (NM_014592, intron 1 of 7)"	"intron (NM_014592, intron 1 of 7)"	68946	NM_001278340	30820	Hs.484111	NM_014592	ENSG00000182132	KCNIP1	KCHIP1|VABP	potassium voltage-gated channel interacting protein 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1196	chr5	170249883	170250883	+	16.6	1000	Intergenic	Intergenic	-38503	NM_022897	64901	Hs.410810	NM_022897	ENSG00000204764	RANBP17	-	RAN binding protein 17	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr5-1198	chr5	170637506	170638506	+	16.6	1000	"intron (NM_022897, intron 20 of 27)"	AluSc|SINE|Alu	-98282	NM_021025	30012	Hs.249125	NM_021025	ENSG00000164438	TLX3	HOX11L2|RNX	T-cell leukemia homeobox 3	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr5-1200	chr5	170894253	170895595	+	21.1	1342	Intergenic	AluY|SINE|Alu	48257	NM_003862	8817	Hs.87191	NM_003862	ENSG00000156427	FGF18	FGF-18|ZFGF5	fibroblast growth factor 18	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr5-1203	chr5	170985417	170987036	+	22.4	1619	Intergenic	L1ME3E|LINE|L1	139559	NM_003862	8817	Hs.87191	NM_003862	ENSG00000156427	FGF18	FGF-18|ZFGF5	fibroblast growth factor 18	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr5-1209	chr5	171866419	171868102	+	27.5	1683	"intron (NM_001017995, intron 1 of 12)"	"intron (NM_001017995, intron 1 of 12)"	14267	NM_001308175	285590	Hs.285666	NM_001017995	ENSG00000174705	SH3PXD2B	FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4	SH3 and PX domains 2B	protein-coding	27.52	2.91	9.457044674	7.03E-14
chr5-121	chr5	153863424	153865366	+	44.8	1942	Intergenic	L3|LINE|CR1	-6571	NM_004821	9421	Hs.152531	NM_004821	ENSG00000113196	HAND1	Hxt|Thing1|bHLHa27|eHand	heart and neural crest derivatives expressed 1	protein-coding	44.81	8.74	5.127002288	2.02E-14
chr5-1210	chr5	171878941	171883988	+	95.4	5047	promoter-TSS (NM_001308175)	promoter-TSS (NM_001308175)	63	NM_001308175	285590	Hs.285666	NM_001017995	ENSG00000174705	SH3PXD2B	FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4	SH3 and PX domains 2B	protein-coding	95.37	12.62	7.557052298	6.32E-39
chr5-1212	chr5	171994946	171996259	+	18.6	1313	Intergenic	L2b|LINE|L2	-72667	NM_001308178	54492	Hs.91521	NM_001142651	ENSG00000214357	NEURL1B	NEURL3|hNeur2|neur2	neuralized E3 ubiquitin protein ligase 1B	protein-coding	18.56	1.46	12.71232877	2.41E-11
chr5-1213	chr5	171999016	172000344	+	18.6	1328	Intergenic	Intergenic	-68589	NM_001308178	54492	Hs.91521	NM_001142651	ENSG00000214357	NEURL1B	NEURL3|hNeur2|neur2	neuralized E3 ubiquitin protein ligase 1B	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr5-1214	chr5	172012063	172013335	+	19.2	1272	Intergenic	L1ME4a|LINE|L1	-55570	NM_001308178	54492	Hs.91521	NM_001142651	ENSG00000214357	NEURL1B	NEURL3|hNeur2|neur2	neuralized E3 ubiquitin protein ligase 1B	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr5-1216	chr5	172043173	172046573	+	46.1	3400	Intergenic	CpG	-23396	NM_001308178	54492	Hs.91521	NM_001142651	ENSG00000214357	NEURL1B	NEURL3|hNeur2|neur2	neuralized E3 ubiquitin protein ligase 1B	protein-coding	46.09	9.71	4.746652935	8.12E-14
chr5-122	chr5	170087092	170088348	+	24.3	1256	"intron (NR_136214, intron 4 of 5)"	"intron (NR_136214, intron 4 of 5)"	20754	NR_136214	105377716	Hs.570880	NR_136214	ENSG00000253591	LOC105377716	-	uncharacterized LOC105377716	ncRNA	24.32	2.91	8.357388316	5.77E-12
chr5-1221	chr5	172724119	172725119	+	16	1000	Intergenic	Intergenic	31887	NM_003714	8614	Hs.233160	NM_003714	ENSG00000113739	STC2	STC-2|STCRP	stanniocalcin 2	protein-coding	16	0.97	16.49484536	3.54E-11
chr5-1227	chr5	1114087	1115408	+	15.4	1321	Intergenic	Intergenic	-2575	NM_006598	10723	Hs.172613	NM_006598	ENSG00000113504	SLC12A7	KCC4	solute carrier family 12 member 7	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1230	chr5	1425857	1426857	+	14.7	1000	"intron (NM_001044, intron 4 of 14)"	L1MB3|LINE|L1	19186	NM_001044	6531	Hs.406	NM_001044	ENSG00000142319	SLC6A3	DAT|DAT1|PKDYS	solute carrier family 6 member 3	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr5-1234	chr5	1661105	1662450	+	22.4	1345	Intergenic	Intergenic	-27657	NR_003713	728613	Hs.720393	NR_003713		LOC728613	-	programmed cell death 6 pseudogene	pseudo	22.4	4.37	5.125858124	1.32E-07
chr5-1235	chr5	1667510	1668818	+	20.5	1308	Intergenic	Intergenic	-34044	NR_003713	728613	Hs.720393	NR_003713		LOC728613	-	programmed cell death 6 pseudogene	pseudo	20.48	2.91	7.037800687	2.92E-09
chr5-1239	chr5	1774592	1776413	+	27.5	1821	Intergenic	L1M7|LINE|L1	24454	NM_032479	64979	Hs.719465	NM_032479	ENSG00000171421	MRPL36	BRIP1|L36mt|MRP-L36|PRPL36|RPMJ	mitochondrial ribosomal protein L36	protein-coding	27.52	1.46	18.84931507	9.89E-20
chr5-1242	chr5	1851262	1852262	+	16	1000	Intergenic	Intergenic	4920	NR_104602	101929034	Hs.128032	NR_104602	ENSG00000250417	LINC02116	-	long intergenic non-protein coding RNA 2116	ncRNA	16	3.4	4.705882353	2.25E-05
chr5-1243	chr5	1930304	1932027	+	35.8	1723	Intergenic	CpG	43720	NR_109912	101929081	Hs.519180	NR_109912	ENSG00000249326	CTD-2194D22.4	-	uncharacterized LOC101929081	ncRNA	35.84	6.8	5.270588235	3.95E-12
chr5-1247	chr5	2101122	2102390	+	17.3	1268	Intergenic	Intergenic	210559	NR_104616	100506858	Hs.445071	NR_104616		LOC100506858	-	uncharacterized LOC100506858	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr5-1249	chr5	2166344	2170385	+	55.7	4041	Intergenic	AluY|SINE|Alu	143951	NR_104616	100506858	Hs.445071	NR_104616		LOC100506858	-	uncharacterized LOC100506858	ncRNA	55.69	9.71	5.735324408	6.93E-19
chr5-1252	chr5	2301591	2302871	+	21.8	1280	Intergenic	Intergenic	10084	NR_104616	100506858	Hs.445071	NR_104616		LOC100506858	-	uncharacterized LOC100506858	ncRNA	21.76	3.88	5.608247423	2.53E-08
chr5-1254	chr5	2459453	2464037	+	57.6	4584	Intergenic	Intergenic	-149430	NR_104616	100506858	Hs.445071	NR_104616		LOC100506858	-	uncharacterized LOC100506858	ncRNA	57.61	5.82	9.89862543	3.99E-29
chr5-1258	chr5	4857775	4858775	+	16	1000	Intergenic	Intergenic	84681	NR_104619	101929153	Hs.385526	NR_104619	ENSG00000249521	LINC02114	-	long intergenic non-protein coding RNA 2114	ncRNA	16	2.43	6.58436214	7.90E-07
chr5-126	chr5	6495242	6496830	+	30.1	1588	"3' UTR (NM_001145161, exon 2 of 2)"	"3' UTR (NM_001145161, exon 2 of 2)"	47300	NM_001145161	134111	Hs.126856	NM_001145161	ENSG00000215218	UBE2QL1	-	ubiquitin conjugating enzyme E2 Q family like 1	protein-coding	30.08	5.82	5.16838488	6.85E-10
chr5-1264	chr5	6451240	6453451	+	32.6	2211	"intron (NM_001145161, intron 1 of 1)"	"intron (NM_001145161, intron 1 of 1)"	3609	NM_001145161	134111	Hs.126856	NM_001145161	ENSG00000215218	UBE2QL1	-	ubiquitin conjugating enzyme E2 Q family like 1	protein-coding	32.64	4.85	6.729896907	5.03E-13
chr5-1269	chr5	6814693	6815693	+	15.4	1000	Intergenic	Intergenic	12841	NR_036242	100422999		NR_036242	ENSG00000283420	MIR4278	-	microRNA 4278	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr5-1272	chr5	10282470	10283470	+	15.4	1000	"intron (NM_138809, intron 4 of 5)"	AluSg|SINE|Alu	25198	NM_138809	134147	Hs.192586	NM_138809	ENSG00000164237	CMBL	JS-1	carboxymethylenebutenolidase homolog	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1278	chr5	14582460	14583460	+	15.4	1000	"intron (NM_019018, intron 1 of 7)"	"intron (NM_019018, intron 1 of 7)"	1069	NM_019018	54491	Hs.155085	NM_019018	ENSG00000145569	FAM105A	NET20	family with sequence similarity 105 member A	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr5-1279	chr5	16728142	16729142	+	16	1000	"intron (NM_012334, intron 19 of 40)"	"intron (NM_012334, intron 19 of 40)"	-111475	NM_001034850	54463	Hs.481704	NM_019000	ENSG00000154153	FAM134B	JK-1|JK1	family with sequence similarity 134 member B	protein-coding	16	2.91	5.498281787	4.98E-06
chr5-1282	chr5	32709167	32711040	+	29.4	1873	promoter-TSS (NM_001204376)	promoter-TSS (NM_001204376)	-640	NM_001204376	4883	Hs.13528	NM_000908	ENSG00000113389	NPR3	ANP-C|ANPR-C|ANPRC|C5orf23|GUCY2B|NPR-C|NPRC	natriuretic peptide receptor 3	protein-coding	29.44	3.88	7.587628866	2.58E-13
chr5-1284	chr5	34806666	34807666	+	14.7	1000	"intron (NM_001145520, intron 5 of 17)"	"intron (NM_001145520, intron 5 of 17)"	4743	NR_106988	102465753		NR_106988	ENSG00000280494	MIR7641-2	B-ATF|hsa-mir-7641-2	microRNA 7641-2	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr5-1290	chr5	38400608	38401608	+	14.1	1000	"non-coding (NR_102749, exon 2 of 2)"	"non-coding (NR_102749, exon 2 of 2)"	2465	NR_102750	100506475	Hs.662304	NR_102749	ENSG00000248572	EGFLAM-AS2	-	EGFLAM antisense RNA 2	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr5-1291	chr5	38436209	38437728	+	23.7	1519	"intron (NM_152403, intron 16 of 21)"	"intron (NM_152403, intron 16 of 21)"	-8610	NM_182801	133584	Hs.20103	NM_152403	ENSG00000164318	EGFLAM	AGRINL|AGRNL|PIKA	"EGF like, fibronectin type III and laminin G domains"	protein-coding	23.68	1.94	12.20618557	6.71E-14
chr5-1292	chr5	38455093	38456093	+	16	1000	"intron (NM_182801, intron 3 of 5)"	L1ME3|LINE|L1	10015	NM_182801	133584	Hs.20103	NM_152403	ENSG00000164318	EGFLAM	AGRINL|AGRNL|PIKA	"EGF like, fibronectin type III and laminin G domains"	protein-coding	16	2.43	6.58436214	7.90E-07
chr5-1296	chr5	42747450	42748450	+	15.4	1000	Intergenic	Intergenic	-8970	NM_001134848	100129792	Hs.745017	NM_001134848	ENSG00000198865	CCDC152	CH5400	coiled-coil domain containing 152	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr5-1299	chr5	52284039	52285039	+	15.4	1000	promoter-TSS (NM_002203)	promoter-TSS (NM_002203)	-617	NM_002203	3673	Hs.482077	NM_002203	ENSG00000164171	ITGA2	BR|CD49B|GPIa|HPA-5|VLA-2|VLAA2	integrin subunit alpha 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr5-1300	chr5	52775283	52777708	+	34.6	2425	"5' UTR (NM_006350, exon 1 of 6)"	"5' UTR (NM_006350, exon 1 of 6)"	231	NM_013409	10468	Hs.9914	NM_006350	ENSG00000134363	FST	FS	follistatin	protein-coding	34.56	1.94	17.81443299	1.63E-24
chr5-1301	chr5	54446842	54447842	+	16	1000	"intron (NM_152623, intron 2 of 11)"	"intron (NM_152623, intron 2 of 11)"	-8604	NM_001008397	493869	Hs.289044	NM_001008397	ENSG00000164294	GPX8	EPLA847|GPx-8|GSHPx-8|UNQ847	glutathione peroxidase 8 (putative)	protein-coding	16	3.88	4.12371134	7.91E-05
chr5-1306	chr5	55363328	55364328	+	15.4	1000	Intergenic	Intergenic	72833	NR_102755	441072	Hs.482141	NR_102755	ENSG00000227908	FLJ31104	-	uncharacterized LOC441072	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr5-1307	chr5	55472858	55474462	+	20.5	1604	"intron (NM_024669, intron 3 of 11)"	"intron (NM_024669, intron 3 of 11)"	55526	NM_024669	79722	Hs.436214	NM_024669	ENSG00000164512	ANKRD55	-	ankyrin repeat domain 55	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr5-1308	chr5	55555128	55556128	+	14.1	1000	Intergenic	LTR16D1|LTR|ERVL	-26442	NM_024669	79722	Hs.436214	NM_024669	ENSG00000164512	ANKRD55	-	ankyrin repeat domain 55	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr5-1309	chr5	56056454	56057454	+	16.6	1000	Intergenic	Intergenic	-53946	NM_005921	4214	Hs.653654	NM_005921	ENSG00000095015	MAP3K1	MAPKKK1|MEKK|MEKK 1|MEKK1|SRXY6	mitogen-activated protein kinase kinase kinase 1	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr5-1310	chr5	58098755	58099755	+	15.4	1000	"intron (NM_001317915, intron 3 of 4)"	"intron (NM_001317915, intron 3 of 4)"	196504	NM_001197223	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr5-1311	chr5	58220552	58221552	+	14.7	1000	Intergenic	Intergenic	74707	NM_001197223	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr5-1314	chr5	67432425	67433425	+	14.7	1000	Intergenic	AluJb|SINE|Alu	-52779	NR_105003	102467655	Hs.544102	NR_105003	ENSG00000253787	LOC102467655	-	uncharacterized LOC102467655	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr5-1315	chr5	71100223	71101223	+	16	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	85733	NM_004291	9607	Hs.1707	NM_004291	ENSG00000164326	CARTPT	CART	CART prepropeptide	protein-coding	16	1.94	8.24742268	7.67E-08
chr5-1317	chr5	71449216	71450216	+	15.4	1000	"intron (NM_005909, intron 2 of 6)"	"intron (NM_005909, intron 2 of 6)"	-15578	NR_039967	100616377		NR_039967	ENSG00000264099	MIR4803	-	microRNA 4803	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr5-1320	chr5	72109338	72110338	+	14.7	1000	Intergenic	AluSx1|SINE|Alu	-2580	NM_002270	3842	Hs.482497	NM_002270	ENSG00000083312	TNPO1	IPO2|KPNB2|MIP|MIP1|TRN	transportin 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr5-1322	chr5	72256698	72257698	+	15.4	1000	"intron (NM_138782, intron 1 of 25)"	"intron (NM_138782, intron 1 of 25)"	5390	NM_001146032	115548	Hs.165762	NM_138782	ENSG00000157107	FCHO2	-	FCH domain only 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1323	chr5	72394560	72395560	+	14.7	1000	Intergenic	AluJo|SINE|Alu	-21328	NM_001161342	134285	Hs.162246	NM_173490	ENSG00000157111	TMEM171	PRP2	transmembrane protein 171	protein-coding	14.72	0	15.16333034	3.99E-13
chr5-1327	chr5	72473967	72475781	+	26.2	1814	Intergenic	Tigger1|DNA|TcMar-Tigger	5851	NM_153217	134288	Hs.508588	NM_153217	ENSG00000164325	TMEM174	-	transmembrane protein 174	protein-coding	26.24	4.37	6.004576659	7.40E-10
chr5-1328	chr5	72590495	72595157	+	64.6	4662	Intergenic	L2|LINE|L2	-95038	NR_134291	340090	Hs.434311	NR_134291		LOC340090	-	uncharacterized LOC340090	ncRNA	64.65	16.02	4.035580524	1.18E-15
chr5-1330	chr5	72688133	72689133	+	15.4	1000	Intergenic	Intergenic	55719	NM_004472	2297	Hs.519385	NM_004472	ENSG00000251493	FOXD1	FKHL8|FREAC-4|FREAC4	forkhead box D1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1331	chr5	72733524	72735209	+	29.4	1685	Intergenic	Intergenic	9986	NM_004472	2297	Hs.519385	NM_004472	ENSG00000251493	FOXD1	FKHL8|FREAC-4|FREAC4	forkhead box D1	protein-coding	29.44	3.88	7.587628866	2.58E-13
chr5-1332	chr5	72739640	72740952	+	17.3	1312	Intergenic	CpG	4056	NM_004472	2297	Hs.519385	NM_004472	ENSG00000251493	FOXD1	FKHL8|FREAC-4|FREAC4	forkhead box D1	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr5-1333	chr5	72783313	72786822	+	53.8	3509	Intergenic	MER5A|DNA|hAT-Charlie	-9183	NM_001037637	689	Hs.591768	NM_001207	ENSG00000145741	BTF3	BETA-NAC|BTF3a|BTF3b|NACB	basic transcription factor 3	protein-coding	53.77	7.77	6.92020592	1.47E-21
chr5-1338	chr5	73776086	73777086	+	15.4	1000	"intron (NR_126354, intron 1 of 2)"	"intron (NR_126354, intron 1 of 2)"	56215	NR_126354	104310351	Hs.582291	NR_126354	ENSG00000248673	LINC01331	-	long intergenic non-protein coding RNA 1331	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr5-1339	chr5	73860858	73861858	+	15.4	1000	Intergenic	Intergenic	-28557	NR_126354	104310351	Hs.582291	NR_126354	ENSG00000248673	LINC01331	-	long intergenic non-protein coding RNA 1331	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr5-1340	chr5	75146148	75147148	+	14.7	1000	Intergenic	MER83|LTR|ERV1	-133335	NM_001099271	134359	Hs.432726	NM_152408	ENSG00000152359	POC5	C5orf37	POC5 centriolar protein	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr5-1341	chr5	76010086	76011086	+	16	1000	Intergenic	Intergenic	-1282	NM_001311313	2149	Hs.482562	NM_001992	ENSG00000181104	F2R	CF2R|HTR|PAR-1|PAR1|TR	coagulation factor II thrombin receptor	protein-coding	16	2.91	5.498281787	4.98E-06
chr5-1342	chr5	76934686	76935686	+	14.7	1000	promoter-TSS (NM_032109)	promoter-TSS (NM_032109)	-664	NM_032109	23440	Hs.202247	NM_032109	ENSG00000171540	OTP	-	orthopedia homeobox	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr5-1350	chr5	106882511	106883511	+	15.4	1000	"intron (NM_001962, intron 1 of 4)"	"intron (NM_001962, intron 1 of 4)"	123585	NM_001962	1946	Hs.288741	NM_001962	ENSG00000184349	EFNA5	AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS	ephrin A5	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1351	chr5	106890517	106891517	+	15.4	1000	"intron (NM_001962, intron 1 of 4)"	"intron (NM_001962, intron 1 of 4)"	115579	NM_001962	1946	Hs.288741	NM_001962	ENSG00000184349	EFNA5	AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS	ephrin A5	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1354	chr5	112452611	112453611	+	15.4	1000	"intron (NM_001085377, intron 6 of 18)"	"intron (NM_001085377, intron 6 of 18)"	140704	NM_001242377	167227	Hs.443875	NM_152624	ENSG00000172795	DCP2	NUDT20	decapping mRNA 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1355	chr5	112520364	112521364	+	16	1000	"intron (NM_001085377, intron 3 of 18)"	"intron (NM_001085377, intron 3 of 18)"	109748	NM_002387	4163	Hs.593171	NM_002387	ENSG00000171444	MCC	MCC1	mutated in colorectal cancers	protein-coding	16	2.91	5.498281787	4.98E-06
chr5-1358	chr5	114413412	114414412	+	14.1	1000	Intergenic	HUERS-P3-int|LTR|ERV1	91748	NM_001300759	55521	Hs.519514	NM_018700	ENSG00000152503	TRIM36	HAPRIN|RBCC728|RNF98	tripartite motif containing 36	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr5-1360	chr5	114682808	114683808	+	14.7	1000	Intergenic	L2a|LINE|L2	-50850	NM_001040440	153733	Hs.436121	NM_152549	ENSG00000164221	CCDC112	MBC1	coiled-coil domain containing 112	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr5-1367	chr5	126662092	126663687	+	23.7	1595	"intron (NM_032446, intron 2 of 25)"	"intron (NM_032446, intron 2 of 25)"	36433	NM_001308121	84466	Hs.438709	NM_032446	ENSG00000145794	MEGF10	EMARDD	multiple EGF like domains 10	protein-coding	23.68	0.97	24.41237113	5.03E-19
chr5-1369	chr5	131607075	131608075	+	16	1000	"exon (NM_003687, exon 6 of 7)"	"exon (NM_003687, exon 6 of 7)"	14224	NM_003687	8572	Hs.424312	NM_003687	ENSG00000131435	PDLIM4	RIL	PDZ and LIM domain 4	protein-coding	16	0	16.4818808	1.26E-14
chr5-137	chr5	132935135	132936390	+	24.3	1255	"intron (NM_015082, intron 2 of 15)"	MER47A|DNA|TcMar-Tigger	12461	NM_015082	23105	Hs.483390	NM_015082	ENSG00000053108	FSTL4	-	follistatin like 4	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr5-1370	chr5	131631397	131632397	+	15.4	1000	"intron (NM_003059, intron 1 of 9)"	"intron (NM_003059, intron 1 of 9)"	1752	NM_003059	6583	Hs.310591	NM_003059	ENSG00000197208	SLC22A4	DFNB60|OCTN1	solute carrier family 22 member 4	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1371	chr5	131713901	131714901	+	15.4	1000	"intron (NM_001308122, intron 3 of 10)"	"intron (NM_001308122, intron 3 of 10)"	-8793	NR_110997	553103	Hs.570908	NR_110997	ENSG00000233006	LOC553103	-	uncharacterized LOC553103	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr5-1372	chr5	132133212	132134212	+	15.4	1000	Intergenic	L2c|LINE|L2	-15304	NM_175873	134548	Hs.13308	NM_175873	ENSG00000198944	SOWAHA	ANKRD43	sosondowah ankyrin repeat domain family member A	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr5-1373	chr5	132154099	132155630	+	25	1531	Intergenic	Intergenic	5848	NM_175873	134548	Hs.13308	NM_175873	ENSG00000198944	SOWAHA	ANKRD43	sosondowah ankyrin repeat domain family member A	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr5-1377	chr5	132464848	132465848	+	16	1000	Intergenic	Intergenic	77686	NM_002154	3308	Hs.90093	NM_002154	ENSG00000170606	HSPA4	APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY	heat shock protein family A (Hsp70) member 4	protein-coding	16	3.4	4.705882353	2.25E-05
chr5-1378	chr5	132545856	132548340	+	39	2484	"intron (NM_015082, intron 13 of 15)"	L2a|LINE|L2	159436	NM_002154	3308	Hs.90093	NM_002154	ENSG00000170606	HSPA4	APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY	heat shock protein family A (Hsp70) member 4	protein-coding	39.04	7.77	5.024453024	3.34E-12
chr5-1382	chr5	132783208	132786914	+	53.8	3706	"intron (NM_015082, intron 3 of 15)"	"intron (NM_015082, intron 3 of 15)"	-21663	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA	53.77	9.71	5.537590113	3.95E-18
chr5-1388	chr5	133024656	133026307	+	25.6	1651	Intergenic	AluSq2|SINE|Alu	-77258	NM_015082	23105	Hs.483390	NM_015082	ENSG00000053108	FSTL4	-	follistatin like 4	protein-coding	25.6	1.46	17.53424658	1.83E-18
chr5-1391	chr5	133129164	133130559	+	19.2	1395	Intergenic	Intergenic	-119507	NR_131252	105664404	Hs.582536	NR_131252	ENSG00000249073	WSPAR	LncTCF7|TCONS_00009511	WNT signaling pathway activating non-coding RNA	ncRNA	19.2	2.43	7.901234568	1.91E-09
chr5-1396	chr5	133249701	133252279	+	37.8	2578	"intron (NR_131252, intron 2 of 2)"	AluSz|SINE|Alu	1622	NR_131252	105664404	Hs.582536	NR_131252	ENSG00000249073	WSPAR	LncTCF7|TCONS_00009511	WNT signaling pathway activating non-coding RNA	ncRNA	37.76	4.85	7.78556701	1.78E-16
chr5-1397	chr5	133263461	133264461	+	15.4	1000	Intergenic	L2a|LINE|L2	14593	NR_131252	105664404	Hs.582536	NR_131252	ENSG00000249073	WSPAR	LncTCF7|TCONS_00009511	WNT signaling pathway activating non-coding RNA	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr5-1398	chr5	134365885	134370307	+	65.3	4422	promoter-TSS (NM_001277348)	promoter-TSS (NM_001277348)	-874	NM_001277348	100996485		NM_001277348		C5orf66	-	chromosome 5 open reading frame 66	protein-coding	65.29	10.68	6.11329588	1.76E-23
chr5-1400	chr5	134397560	134398830	+	17.9	1270	"intron (NM_001277348, intron 2 of 5)"	"intron (NM_001277348, intron 2 of 5)"	-22458	NR_105050	101927953	Hs.436898	NR_105049	ENSG00000249082	C5orf66-AS1	CTC-276P9.1|Epist	C5orf66 antisense RNA 1	ncRNA	17.92	0.97	18.4742268	1.12E-13
chr5-1402	chr5	134404601	134405601	+	14.1	1000	"intron (NM_001277348, intron 2 of 5)"	"intron (NM_001277348, intron 2 of 5)"	-29364	NR_105050	101927953	Hs.436898	NR_105049	ENSG00000249082	C5orf66-AS1	CTC-276P9.1|Epist	C5orf66 antisense RNA 1	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr5-1403	chr5	134410943	134411943	+	15.4	1000	"intron (NM_001277348, intron 2 of 5)"	"intron (NM_001277348, intron 2 of 5)"	-35706	NR_105050	101927953	Hs.436898	NR_105049	ENSG00000249082	C5orf66-AS1	CTC-276P9.1|Epist	C5orf66 antisense RNA 1	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr5-1405	chr5	134528915	134530656	+	25.6	1741	"intron (NM_001277348, intron 3 of 5)"	"intron (NM_001277348, intron 3 of 5)"	54082	NR_037895	340073	Hs.434422	NR_037895	ENSG00000249647	C5orf66-AS2	-	C5orf66 antisense RNA 2	ncRNA	25.6	3.88	6.597938144	1.00E-10
chr5-1407	chr5	134545549	134548537	+	45.4	2988	"intron (NM_001277348, intron 3 of 5)"	"intron (NM_001277348, intron 3 of 5)"	36824	NR_037895	340073	Hs.434422	NR_037895	ENSG00000249647	C5orf66-AS2	-	C5orf66 antisense RNA 2	ncRNA	45.45	2.43	18.7037037	8.10E-32
chr5-141	chr5	139421006	139423745	+	49.9	2739	"exon (NM_001184935, exon 1 of 8)"	"exon (NM_001184935, exon 1 of 8)"	509	NM_004883	9542	Hs.408515	NM_004883	ENSG00000158458	NRG2	DON1|HRG2|NTAK	neuregulin 2	protein-coding	49.93	9.71	5.142121524	6.34E-16
chr5-1414	chr5	135964806	135965806	+	15.4	1000	Intergenic	Intergenic	-264142	NM_001167576	57113	Hs.591263	NM_020389	ENSG00000069018	TRPC7	TRP7	transient receptor potential cation channel subfamily C member 7	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr5-1415	chr5	136227392	136228392	+	16	1000	Intergenic	Intergenic	-235994	NR_134246	105379192	Hs.124611	NR_134246		LOC105379192	-	uncharacterized LOC105379192	ncRNA	16	2.43	6.58436214	7.90E-07
chr5-1416	chr5	137775574	137776574	+	14.7	1000	"intron (NM_001271803, intron 1 of 7)"	"intron (NM_001271803, intron 1 of 7)"	1384	NR_073448	51308	Hs.416090	NM_016606	ENSG00000132563	REEP2	C5orf19|SGC32445|SPG72|Yip2d	receptor accessory protein 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr5-1418	chr5	139127341	139128962	+	23.7	1621	Intergenic	Intergenic	-2343	NR_105053	101929696	Hs.147408	NR_105052	ENSG00000249131	PSD2-AS1	-	PSD2 antisense RNA 1	ncRNA	23.68	3.4	6.964705882	5.45E-10
chr5-142	chr5	141293714	141295243	+	35.2	1529	Intergenic	L2c|LINE|L2	-8907	NM_001142603	9812	Hs.210532	NM_014773	ENSG00000081791	KIAA0141	DELE	KIAA0141	protein-coding	35.2	7.28	4.835164835	9.40E-11
chr5-1421	chr5	139233123	139236164	+	40.3	3041	"intron (NM_013983, intron 7 of 10)"	"intron (NM_013983, intron 7 of 10)"	59237	NM_032289	84249	Hs.21963	NM_032289	ENSG00000146005	PSD2	EFA6C	pleckstrin and Sec7 domain containing 2	protein-coding	40.33	3.88	10.3943299	5.62E-21
chr5-1425	chr5	139301504	139302504	+	15.4	1000	"intron (NM_013983, intron 1 of 10)"	L1MC1|LINE|L1	120880	NM_004883	9542	Hs.408515	NM_004883	ENSG00000158458	NRG2	DON1|HRG2|NTAK	neuregulin 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr5-1428	chr5	139400454	139401454	+	15.4	1000	"intron (NM_013983, intron 1 of 10)"	"intron (NM_013983, intron 1 of 10)"	21930	NM_004883	9542	Hs.408515	NM_004883	ENSG00000158458	NRG2	DON1|HRG2|NTAK	neuregulin 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1432	chr5	141075429	141077242	+	27.5	1813	Intergenic	Intergenic	-14535	NM_022481	64411	Hs.726187	NM_022481	ENSG00000120318	ARAP3	CENTD3|DRAG1	"ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3"	protein-coding	27.52	2.43	11.32510288	2.19E-15
chr5-1435	chr5	141188070	141189647	+	25	1577	Intergenic	Intergenic	56909	NM_001278615	5097	Hs.79769	NM_002587	ENSG00000156453	PCDH1	PC42|PCDH42	protocadherin 1	protein-coding	24.96	1.94	12.86597938	5.33E-15
chr5-1437	chr5	141246467	141247754	+	22.4	1287	"intron (NM_002587, intron 2 of 2)"	"intron (NM_002587, intron 2 of 2)"	-1343	NM_001278615	5097	Hs.79769	NM_002587	ENSG00000156453	PCDH1	PC42|PCDH42	protocadherin 1	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr5-1439	chr5	141262893	141264276	+	17.9	1383	Intergenic	Intergenic	-5609	NM_032420	5097	Hs.79769	NM_002587	ENSG00000156453	PCDH1	PC42|PCDH42	protocadherin 1	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr5-144	chr5	150022119	150023375	+	22.4	1256	"intron (NM_007286, intron 1 of 2)"	"intron (NM_007286, intron 1 of 2)"	2540	NM_001109974	11346	Hs.435228	NM_007286	ENSG00000171992	SYNPO	-	synaptopodin	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr5-1440	chr5	141274356	141275356	+	13.4	1000	TTS (NR_033244)	TTS (NR_033244)	1404	NR_033244	729080	Hs.730564	NR_033244		LOC729080	-	glycine cleavage system protein H (aminomethyl carrier) pseudogene	pseudo	13.44	2.43	5.530864198	2.99E-05
chr5-1446	chr5	143412172	143413172	+	16	1000	Intergenic	Intergenic	137606	NM_030799	81555	Hs.372050	NM_030799	ENSG00000145817	YIPF5	FinGER5|SB140|SMAP-5|SMAP5|YIP1A	Yip1 domain family member 5	protein-coding	16	0.49	32.65306122	1.26E-14
chr5-1449	chr5	145749395	145750395	+	15.4	1000	Intergenic	MIRc|SINE|MIR	31308	NM_002700	5459	Hs.553499	NM_002700	ENSG00000091010	POU4F3	BRN3C|DFNA15|DFNA42|DFNA52	POU class 4 homeobox 3	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr5-145	chr5	171145134	171146646	+	27.5	1512	Intergenic	Charlie4z|DNA|hAT-Charlie	-66986	NM_001289970	644994	Hs.591740	NM_001289970		SMIM23	C5orf50	small integral membrane protein 23	protein-coding	27.52	3.4	8.094117647	1.25E-12
chr5-1452	chr5	147181990	147182990	+	14.7	1000	Intergenic	Intergenic	-20079	NM_001270941	9832	Hs.740461	NM_014790	ENSG00000176049	JAKMIP2	JAMIP2|NECC1	janus kinase and microtubule interacting protein 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr5-1454	chr5	148145543	148146543	+	13.4	1000	Intergenic	L1MC4a|LINE|L1	-60113	NM_000024	154	Hs.2551	NM_000024	ENSG00000169252	ADRB2	ADRB2R|ADRBR|B2AR|BAR|BETA2AR	adrenoceptor beta 2	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr5-1458	chr5	148654947	148655947	+	15.4	1000	"intron (NM_001146337, intron 1 of 17)"	MLT1B|LTR|ERVL-MaLR	4046	NM_152406	134265	Hs.62930	NM_152406	ENSG00000157510	AFAP1L1	-	actin filament associated protein 1 like 1	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr5-1460	chr5	148770540	148771540	+	15.4	1000	"intron (NM_001317987, intron 1 of 2)"	LTR85c|LTR|Gypsy?	-12202	NM_014443	27190	Hs.156979	NM_014443	ENSG00000127743	IL17B	IL-17B|IL-20|NIRF|ZCYTO7	interleukin 17B	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-1462	chr5	149062690	149063690	+	14.1	1000	Intergenic	Intergenic	-46625	NM_001172698	133522	Hs.483816	NM_133263	ENSG00000155846	PPARGC1B	ERRL1|PERC|PGC-1(beta)|PGC1B	PPARG coactivator 1 beta	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr5-1465	chr5	149465011	149466011	+	14.7	1000	"intron (NM_001288705, intron 1 of 20)"	MER5A1|DNA|hAT-Charlie	692	NR_109969	1436	Hs.586219	NM_005211	ENSG00000182578	CSF1R	C-FMS|CD115|CSF-1R|CSFR|FIM2|FMS|HDLS|M-CSF-R	colony stimulating factor 1 receptor	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr5-1468	chr5	149616989	149620469	+	53.1	3480	"intron (NM_171825, intron 13 of 17)"	"intron (NM_171825, intron 13 of 17)"	49305	NM_014228	6534	Hs.241597	NM_014228	ENSG00000011083	SLC6A7	PROT	solute carrier family 6 member 7	protein-coding	53.13	4.85	10.95463918	3.99E-28
chr5-1469	chr5	149631119	149633952	+	41	2833	"intron (NM_171825, intron 7 of 17)"	"intron (NM_171825, intron 7 of 17)"	36868	NM_015981	815	Hs.743976	NM_015981	ENSG00000070808	CAMK2A	CAMKA	calcium/calmodulin dependent protein kinase II alpha	protein-coding	40.97	6.8	6.025	3.54E-15
chr5-1471	chr5	149659153	149662897	+	58.9	3744	"intron (NM_171825, intron 1 of 17)"	"intron (NM_171825, intron 1 of 17)"	8378	NM_015981	815	Hs.743976	NM_015981	ENSG00000070808	CAMK2A	CAMKA	calcium/calmodulin dependent protein kinase II alpha	protein-coding	58.89	9.71	6.064881565	3.28E-21
chr5-1472	chr5	149682086	149683086	+	15.4	1000	promoter-TSS (NM_001012301)	promoter-TSS (NM_001012301)	-61	NM_001012301	340075	Hs.591252	NM_001012301	ENSG00000183876	ARSI	ASI|SPG66	arylsulfatase family member I	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr5-1473	chr5	149690596	149691926	+	19.8	1330	Intergenic	Intergenic	-8736	NM_001012301	340075	Hs.591252	NM_001012301	ENSG00000183876	ARSI	ASI|SPG66	arylsulfatase family member I	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr5-1476	chr5	149935379	149937724	+	33.3	2345	"3' UTR (NM_001301063, exon 14 of 14)"	"3' UTR (NM_001301063, exon 14 of 14)"	-44091	NM_001166208	11346	Hs.435228	NM_007286	ENSG00000171992	SYNPO	-	synaptopodin	protein-coding	33.28	5.82	5.718213058	4.04E-12
chr5-1478	chr5	150010908	150012200	+	19.2	1292	"intron (NM_001166209, intron 2 of 2)"	"intron (NM_001166209, intron 2 of 2)"	-8653	NM_007286	11346	Hs.435228	NM_007286	ENSG00000171992	SYNPO	-	synaptopodin	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr5-1479	chr5	150050008	150052980	+	57	2972	"intron (NM_001122853, intron 5 of 6)"	CpG-21284	11091	NM_133371	91977	Hs.91626	NM_133371	ENSG00000164591	MYOZ3	CS-3|CS3|FRP3	myozenin 3	protein-coding	56.97	5.82	9.788659794	3.96E-28
chr5-1483	chr5	151288178	151289178	+	15.4	1000	"intron (NM_001146040, intron 1 of 8)"	MIR|SINE|MIR	15719	NM_001292000	2741	Hs.121490	NM_000171	ENSG00000145888	GLRA1	HKPX1|STHE	glycine receptor alpha 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1488	chr5	156967618	156972516	+	81.9	4898	"intron (NM_033274, intron 3 of 22)"	LTR37B|LTR|ERV1	32764	NM_033274	8728	Hs.483944	NM_023038	ENSG00000135074	ADAM19	FKSG34|MADDAM|MLTNB	ADAM metallopeptidase domain 19	protein-coding	81.93	18.93	4.328050713	2.88E-21
chr5-1490	chr5	158059507	158060507	+	16	1000	Intergenic	MIRb|SINE|MIR	-223226	NR_109888	101927697	Hs.483960	NR_109888	ENSG00000276778	LOC101927697	-	uncharacterized LOC101927697	ncRNA	16	0	16.4818808	1.26E-14
chr5-1494	chr5	159306019	159307019	+	15.4	1000	Intergenic	Intergenic	-8128	NR_109891	101927766	Hs.638568	NR_109891	ENSG00000253311	LINC01847	-	long intergenic non-protein coding RNA 1847	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr5-1498	chr5	167859782	167861286	+	21.1	1504	"intron (NM_015238, intron 15 of 22)"	MIRb|SINE|MIR	-52929	NM_002887	5917	Hs.654907	NM_002887	ENSG00000113643	RARS	ArgRS|DALRD1|HLD9	arginyl-tRNA synthetase	protein-coding	21.12	2.43	8.691358025	2.25E-10
chr5-150	chr5	31836388	31837388	+	21.1	1000	"intron (NM_178140, intron 2 of 24)"	AluSx|SINE|Alu	99377	NR_036241	100422874		NR_036241	ENSG00000266243	MIR4279	-	microRNA 4279	ncRNA	21.12	2.43	8.691358025	2.25E-10
chr5-1500	chr5	168193072	168194072	+	15.4	1000	"intron (NM_003062, intron 14 of 35)"	"intron (NM_003062, intron 14 of 35)"	1688	NR_029632	407001		NR_029632	ENSG00000207739	MIR218-2	MIRN218-2|mir-218-2	microRNA 218-2	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr5-1501	chr5	168199730	168200730	+	14.1	1000	"intron (NM_003062, intron 13 of 35)"	"intron (NM_003062, intron 13 of 35)"	-4970	NR_029632	407001		NR_029632	ENSG00000207739	MIR218-2	MIRN218-2|mir-218-2	microRNA 218-2	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr5-1505	chr5	168569869	168570869	+	15.4	1000	"intron (NM_003062, intron 4 of 35)"	MIRb|SINE|MIR	120329	NR_030311	693170		NR_030311	ENSG00000207619	MIR585	MIRN585|hsa-mir-585|mir-585	microRNA 585	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr5-1508	chr5	169537306	169538306	+	15.4	1000	Intergenic	MIRb|SINE|MIR	4889	NM_144769	2299	Hs.87236	NM_012188	ENSG00000168269	FOXI1	FKH10|FKHL10|FREAC-6|FREAC6|HFH-3|HFH3	forkhead box I1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr5-151	chr5	31853580	31855559	+	37.1	1979	"intron (NM_178140, intron 2 of 24)"	"intron (NM_178140, intron 2 of 24)"	81696	NR_036241	100422874		NR_036241	ENSG00000266243	MIR4279	-	microRNA 4279	ncRNA	37.12	6.31	5.882725832	1.20E-13
chr5-1510	chr5	169564531	169565531	+	16	1000	Intergenic	Intergenic	32114	NM_144769	2299	Hs.87236	NM_012188	ENSG00000168269	FOXI1	FKH10|FKHL10|FREAC-6|FREAC6|HFH-3|HFH3	forkhead box I1	protein-coding	16	3.88	4.12371134	7.91E-05
chr5-1511	chr5	169592600	169593866	+	17.3	1266	Intergenic	Intergenic	32912	NR_108022	100507267	Hs.634846	NR_108022		LINC01187	CTB-27N1.1|KIDR	long intergenic non-protein coding RNA 1187	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr5-1513	chr5	169834074	169835074	+	14.7	1000	"intron (NR_109899, intron 1 of 2)"	"intron (NR_109899, intron 1 of 2)"	-17893	NM_004137	3779	Hs.484099	NM_004137	ENSG00000145936	KCNMB1	BKbeta1|K(VCA)beta|SLO-BETA|hbeta1|hslo-beta|k(VCA)beta-1|slo-beta-1	potassium calcium-activated channel subfamily M regulatory beta subunit 1	protein-coding	14.72	0	15.16333034	3.99E-13
chr5-1514	chr5	169910931	169911931	+	16	1000	"intron (NM_001034838, intron 1 of 7)"	"intron (NM_001034838, intron 1 of 7)"	-19609	NM_001278339	30820	Hs.484111	NM_014592	ENSG00000182132	KCNIP1	KCHIP1|VABP	potassium voltage-gated channel interacting protein 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr5-1519	chr5	170039138	170040138	+	16	1000	"intron (NM_014592, intron 1 of 7)"	"intron (NM_014592, intron 1 of 7)"	68836	NR_136214	105377716	Hs.570880	NR_136214	ENSG00000253591	LOC105377716	-	uncharacterized LOC105377716	ncRNA	16	3.88	4.12371134	7.91E-05
chr5-1521	chr5	170133711	170134711	+	14.7	1000	"intron (NM_001278340, intron 2 of 8)"	"intron (NM_001278340, intron 2 of 8)"	-25737	NR_136214	105377716	Hs.570880	NR_136214	ENSG00000253591	LOC105377716	-	uncharacterized LOC105377716	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr5-1522	chr5	170184559	170185976	+	16.6	1417	Intergenic	Intergenic	-25456	NM_001291985	2568	Hs.26225	NM_014211	ENSG00000094755	GABRP	-	gamma-aminobutyric acid type A receptor pi subunit	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr5-1524	chr5	170915186	170916186	+	15.4	1000	Intergenic	LTR85c|LTR|Gypsy?	69019	NM_003862	8817	Hs.87191	NM_003862	ENSG00000156427	FGF18	FGF-18|ZFGF5	fibroblast growth factor 18	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-1525	chr5	171076740	171077740	+	14.7	1000	Intergenic	AluSx1|SINE|Alu	-135636	NM_001289970	644994	Hs.591740	NM_001289970		SMIM23	C5orf50	small integral membrane protein 23	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr5-1527	chr5	171178495	171179495	+	14.7	1000	Intergenic	MER112|DNA|hAT-Charlie	-33881	NM_001289970	644994	Hs.591740	NM_001289970		SMIM23	C5orf50	small integral membrane protein 23	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr5-1530	chr5	171817974	171818974	+	16	1000	"intron (NM_001017995, intron 4 of 12)"	AluSx|SINE|Alu	63053	NM_001308175	285590	Hs.285666	NM_001017995	ENSG00000174705	SH3PXD2B	FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4	SH3 and PX domains 2B	protein-coding	16	3.88	4.12371134	7.91E-05
chr5-1534	chr5	171969099	171972653	+	46.1	3554	Intergenic	MLT1B|LTR|ERVL-MaLR	-89349	NM_001017995	285590	Hs.285666	NM_001017995	ENSG00000174705	SH3PXD2B	FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4	SH3 and PX domains 2B	protein-coding	46.09	10.68	4.315543071	1.21E-12
chr5-1536	chr5	171985491	171986491	+	13.4	1000	Intergenic	MIRb|SINE|MIR	-82278	NM_001308178	54492	Hs.91521	NM_001142651	ENSG00000214357	NEURL1B	NEURL3|hNeur2|neur2	neuralized E3 ubiquitin protein ligase 1B	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr5-1538	chr5	171991900	171992900	+	16	1000	Intergenic	Intergenic	-75869	NM_001308178	54492	Hs.91521	NM_001142651	ENSG00000214357	NEURL1B	NEURL3|hNeur2|neur2	neuralized E3 ubiquitin protein ligase 1B	protein-coding	16	3.88	4.12371134	7.91E-05
chr5-1540	chr5	172695037	172696037	+	16	1000	Intergenic	Intergenic	-33222	NM_004387	1482	Hs.54473	NM_004387	ENSG00000183072	NKX2-5	CHNG5|CSX|CSX1|HLHS2|NKX2.5|NKX2E|NKX4-1|VSD3	NK2 homeobox 5	protein-coding	16	1.94	8.24742268	7.67E-08
chr5-1541	chr5	172742104	172743104	+	14.7	1000	"3' UTR (NM_003714, exon 4 of 4)"	"3' UTR (NM_003714, exon 4 of 4)"	13902	NM_003714	8614	Hs.233160	NM_003714	ENSG00000113739	STC2	STC-2|STCRP	stanniocalcin 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr5-1548	chr5	113330	114330	+	15.4	1000	Intergenic	Intergenic	-26543	NM_052909	153478	Hs.535800	NM_052909	ENSG00000153404	PLEKHG4B	-	pleckstrin homology and RhoGEF domain containing G4B	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-1550	chr5	156121	157121	+	15.4	1000	"intron (NM_052909, intron 8 of 17)"	"intron (NM_052909, intron 8 of 17)"	16248	NM_052909	153478	Hs.535800	NM_052909	ENSG00000153404	PLEKHG4B	-	pleckstrin homology and RhoGEF domain containing G4B	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr5-1551	chr5	176378	177378	+	15.4	1000	"intron (NM_052909, intron 16 of 17)"	LTR24|LTR|ERV1	-14748	NM_001080478	389257	Hs.683662	NM_001080478	ENSG00000185028	LRRC14B	-	leucine rich repeat containing 14B	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr5-1555	chr5	519605	520605	+	15.4	1000	"intron (NM_004174, intron 1 of 16)"	"intron (NM_004174, intron 1 of 16)"	4444	NM_004174	6550	Hs.658120	NM_004174	ENSG00000066230	SLC9A3	DIAR8|NHE-3|NHE3	solute carrier family 9 member A3	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr5-156	chr5	72450822	72453636	+	46.7	2814	Intergenic	Intergenic	-5810	NR_134252	105379030		NR_134252	ENSG00000251599	LOC105379030	-	uncharacterized LOC105379030	ncRNA	46.73	6.8	6.872058824	1.95E-18
chr5-1561	chr5	1671606	1672606	+	14.7	1000	Intergenic	MER63A|DNA|hAT-Blackjack	36877	NR_036240	100422966		NR_036240	ENSG00000263746	MIR4277	-	microRNA 4277	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr5-1564	chr5	1778998	1779998	+	15.4	1000	Intergenic	Intergenic	20458	NM_032479	64979	Hs.719465	NM_032479	ENSG00000171421	MRPL36	BRIP1|L36mt|MRP-L36|PRPL36|RPMJ	mitochondrial ribosomal protein L36	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1565	chr5	1836557	1838626	+	33.3	2069	Intergenic	Intergenic	19091	NR_104602	101929034	Hs.128032	NR_104602	ENSG00000250417	LINC02116	-	long intergenic non-protein coding RNA 2116	ncRNA	33.28	4.85	6.86185567	7.28E-14
chr5-1570	chr5	2163284	2164284	+	14.7	1000	Intergenic	Intergenic	148531	NR_104616	100506858	Hs.445071	NR_104616		LOC100506858	-	uncharacterized LOC100506858	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr5-1574	chr5	2172090	2173090	+	14.7	1000	Intergenic	MIR|SINE|MIR	139725	NR_104616	100506858	Hs.445071	NR_104616		LOC100506858	-	uncharacterized LOC100506858	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr5-1581	chr5	2607493	2608493	+	15.4	1000	Intergenic	Intergenic	143776	NM_001134222	153572	Hs.282089	NM_033267	ENSG00000170561	IRX2	IRXA2	iroquois homeobox 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr5-1582	chr5	2656751	2657751	+	15.4	1000	Intergenic	Intergenic	94518	NM_001134222	153572	Hs.282089	NM_033267	ENSG00000170561	IRX2	IRXA2	iroquois homeobox 2	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr5-1585	chr5	3197107	3198509	+	19.8	1402	Intergenic	Intergenic	19859	NR_104617	102467074	Hs.575250	NR_104617	ENSG00000249808	LINC01377	-	long intergenic non-protein coding RNA 1377	ncRNA	19.84	3.88	5.113402062	7.67E-07
chr5-1586	chr5	3594571	3595571	+	15.4	1000	Intergenic	CpG	-1097	NM_024337	79192	Hs.424156	NM_024337	ENSG00000170549	IRX1	IRX-5|IRXA1	iroquois homeobox 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-1587	chr5	3601565	3602565	+	13.4	1000	TTS (NM_024337)	TTS (NM_024337)	5897	NM_024337	79192	Hs.424156	NM_024337	ENSG00000170549	IRX1	IRX-5|IRXA1	iroquois homeobox 1	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr5-1588	chr5	3778104	3779651	+	26.2	1547	Intergenic	Intergenic	182709	NM_024337	79192	Hs.424156	NM_024337	ENSG00000170549	IRX1	IRX-5|IRXA1	iroquois homeobox 1	protein-coding	26.24	4.37	6.004576659	7.40E-10
chr5-159	chr5	94620005	94621623	+	30.1	1618	promoter-TSS (NM_024717)	promoter-TSS (NM_024717)	-535	NM_024717	79772	Hs.591248	NM_024717	ENSG00000175471	MCTP1	-	multiple C2 and transmembrane domain containing 1	protein-coding	30.08	5.82	5.16838488	6.85E-10
chr5-1592	chr5	5358605	5361703	+	35.2	3098	Intergenic	Arthur1C|DNA|hAT-Tip100	-62632	NM_015325	23379	Hs.449296	NM_015325	ENSG00000164151	ICE1	KIAA0947	interactor of little elongation complex ELL subunit 1	protein-coding	35.2	3.88	9.072164948	5.09E-17
chr5-1594	chr5	5952666	5953666	+	14.7	1000	Intergenic	Intergenic	384239	NR_028351	401172	Hs.376760	NM_001001702	ENSG00000250490	LINC02145	-	long intergenic non-protein coding RNA 2145	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr5-1600	chr5	7816409	7817409	+	15.4	1000	"intron (NM_020546, intron 22 of 24)"	"intron (NM_020546, intron 22 of 24)"	34694	NM_001089584	134121	Hs.709979	NM_001089584	ENSG00000215217	C5orf49	-	chromosome 5 open reading frame 49	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-1601	chr5	9061337	9062337	+	15.4	1000	"intron (NM_003966, intron 18 of 22)"	"intron (NM_003966, intron 18 of 22)"	-7830	NR_039779	100616326		NR_039779	ENSG00000266415	MIR4636	mir-4636	microRNA 4636	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr5-1603	chr5	10305950	10308590	+	37.1	2640	"intron (NM_138809, intron 1 of 5)"	"intron (NM_138809, intron 1 of 5)"	898	NM_138809	134147	Hs.192586	NM_138809	ENSG00000164237	CMBL	JS-1	carboxymethylenebutenolidase homolog	protein-coding	37.12	2.43	15.27572016	2.06E-24
chr5-1604	chr5	10333631	10334631	+	14.1	1000	Intergenic	Intergenic	-19620	NM_001270661	10299	Hs.432862	NM_005885	ENSG00000145495	6-Mar	DOA10|MARCH-VI|RNF176|TEB4	membrane associated ring-CH-type finger 6	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr5-1607	chr5	14217107	14218423	+	17.3	1316	"intron (NM_007118, intron 1 of 56)"	"intron (NM_007118, intron 1 of 56)"	73954	NM_007118	7204	Hs.130031	NM_007118	ENSG00000038382	TRIO	ARHGEF23|MEBAS|MRD44|tgat	trio Rho guanine nucleotide exchange factor	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr5-1608	chr5	14414924	14415924	+	14.7	1000	"intron (NM_007118, intron 33 of 56)"	"intron (NM_007118, intron 33 of 56)"	-166467	NM_019018	54491	Hs.155085	NM_019018	ENSG00000145569	FAM105A	NET20	family with sequence similarity 105 member A	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr5-1609	chr5	14912031	14913031	+	14.1	1000	Intergenic	LTR16D|LTR|ERVL	-40644	NM_054027	56172	Hs.156727	NM_054027	ENSG00000154122	ANKH	ANK|CCAL2|CMDJ|CPPDD|HANK|MANK	ANKH inorganic pyrophosphate transport regulator	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr5-1610	chr5	15807136	15808136	+	15.4	1000	"intron (NM_001278317, intron 2 of 3)"	"intron (NM_001278317, intron 2 of 3)"	-127655	NR_030616	100126347		NR_030616	ENSG00000216077	MIR887	MIRN887|hsa-mir-887	microRNA 887	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr5-1615	chr5	31899812	31902165	+	29.4	2353	"intron (NM_178140, intron 2 of 24)"	"intron (NM_178140, intron 2 of 24)"	35277	NR_036241	100422874		NR_036241	ENSG00000266243	MIR4279	-	microRNA 4279	ncRNA	29.44	3.88	7.587628866	2.58E-13
chr5-1618	chr5	33556812	33557812	+	14.1	1000	"intron (NM_030955, intron 20 of 23)"	"intron (NM_030955, intron 20 of 23)"	116430	NR_047677	6897	Hs.481860	NM_152295	ENSG00000113407	TARS	ThrRS	threonyl-tRNA synthetase	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr5-1621	chr5	35126991	35127991	+	14.1	1000	"intron (NM_000949, intron 1 of 9)"	"intron (NM_000949, intron 1 of 9)"	-9267	NR_037910	5618	Hs.368587	NM_000949	ENSG00000113494	PRLR	HPRL|MFAB|hPRLrI	prolactin receptor	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr5-1624	chr5	36421952	36422952	+	15.4	1000	Intergenic	MLT1N2|LTR|ERVL-MaLR	-120441	NM_145000	202151	Hs.199777	NM_145000	ENSG00000164188	RANBP3L	-	RAN binding protein 3 like	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-1625	chr5	36618208	36619208	+	15.4	1000	"intron (NM_001289939, intron 2 of 8)"	"intron (NM_001289939, intron 2 of 8)"	12251	NM_001289940	6507	Hs.481918	NM_004172	ENSG00000079215	SLC1A3	EA6|EAAT1|GLAST|GLAST1	solute carrier family 1 member 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1627	chr5	36648113	36649467	+	17.9	1354	"intron (NM_001289940, intron 3 of 7)"	"intron (NM_001289940, intron 3 of 7)"	42333	NM_001289940	6507	Hs.481918	NM_004172	ENSG00000079215	SLC1A3	EA6|EAAT1|GLAST|GLAST1	solute carrier family 1 member 3	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr5-1628	chr5	36671238	36672238	+	14.1	1000	"intron (NM_001289940, intron 4 of 7)"	"intron (NM_001289940, intron 4 of 7)"	65281	NM_001289940	6507	Hs.481918	NM_004172	ENSG00000079215	SLC1A3	EA6|EAAT1|GLAST|GLAST1	solute carrier family 1 member 3	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr5-1630	chr5	37830588	37831588	+	14.7	1000	"intron (NM_001278098, intron 1 of 2)"	MamRep1161|DNA|TcMar	3836	NM_001278098	2668	Hs.248114	NM_000514	ENSG00000168621	GDNF	ATF|ATF1|ATF2|HFB1-GDNF|HSCR3	glial cell derived neurotrophic factor	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr5-1632	chr5	37916278	37917567	+	22.4	1289	Intergenic	L2a|LINE|L2	-31671	NR_134262	105374729	Hs.150642	NR_134262	ENSG00000251518	LINC02110	-	long intergenic non-protein coding RNA 2110	ncRNA	22.4	4.85	4.618556701	5.54E-07
chr5-1634	chr5	38026407	38027407	+	15.4	1000	Intergenic	AluJr|SINE|Alu	78314	NR_134262	105374729	Hs.150642	NR_134262	ENSG00000251518	LINC02110	-	long intergenic non-protein coding RNA 2110	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr5-1635	chr5	38243364	38244364	+	14.7	1000	Intergenic	MER5A1|DNA|hAT-Charlie	-14647	NM_001205301	133584	Hs.20103	NM_152403	ENSG00000164318	EGFLAM	AGRINL|AGRNL|PIKA	"EGF like, fibronectin type III and laminin G domains"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr5-1638	chr5	38445260	38446525	+	17.3	1265	"intron (NM_182801, intron 1 of 5)"	"intron (NM_182801, intron 1 of 5)"	314	NM_182801	133584	Hs.20103	NM_152403	ENSG00000164318	EGFLAM	AGRINL|AGRNL|PIKA	"EGF like, fibronectin type III and laminin G domains"	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr5-1640	chr5	38573960	38575234	+	17.3	1274	"intron (NR_103554, intron 1 of 8)"	L2b|LINE|L2	-16934	NR_037423	100500824		NR_037423	ENSG00000265304	MIR3650	-	microRNA 3650	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr5-1641	chr5	42560220	42561220	+	14.1	1000	"intron (NM_001242405, intron 1 of 9)"	"intron (NM_001242405, intron 1 of 9)"	-4843	NM_001242406	2690	Hs.125180	NM_000163	ENSG00000112964	GHR	GHBP|GHIP	growth hormone receptor	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr5-1645	chr5	43191272	43192550	+	18.6	1278	promoter-TSS (NM_153361)	promoter-TSS (NM_153361)	-259	NM_153361	167359	Hs.25845	NM_153361	ENSG00000177453	NIM1K	NIM1	NIM1 serine/threonine protein kinase	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr5-1650	chr5	52531681	52532681	+	15.4	1000	Intergenic	Intergenic	126509	NR_104654	257396	Hs.12326	NR_034107	ENSG00000247796	LOC257396	-	uncharacterized LOC257396	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr5-1651	chr5	52540759	52541759	+	15.4	1000	Intergenic	L1PA8|LINE|L1	135587	NR_104654	257396	Hs.12326	NR_034107	ENSG00000247796	LOC257396	-	uncharacterized LOC257396	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr5-1653	chr5	52551092	52552092	+	15.4	1000	Intergenic	L2c|LINE|L2	145920	NR_104654	257396	Hs.12326	NR_034107	ENSG00000247796	LOC257396	-	uncharacterized LOC257396	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr5-1655	chr5	53747752	53748752	+	14.7	1000	Intergenic	Intergenic	-3179	NM_006308	8988	Hs.41707	NM_006308	ENSG00000169271	HSPB3	DHMN2C|HMN2C|HSPL27	heat shock protein family B (small) member 3	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr5-1656	chr5	53934750	53936089	+	22.4	1339	Intergenic	MIR|SINE|MIR	63733	NR_104659	102467080	Hs.637409	NR_104658		LOC102467080	-	uncharacterized LOC102467080	ncRNA	22.4	4.85	4.618556701	5.54E-07
chr5-1658	chr5	54179310	54180310	+	14.7	1000	Intergenic	CpG	101604	NM_007036	11082	Hs.129944	NM_007036	ENSG00000164283	ESM1	endocan	endothelial cell specific molecule 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr5-1659	chr5	54227474	54228474	+	15.4	1000	Intergenic	Intergenic	53440	NM_007036	11082	Hs.129944	NM_007036	ENSG00000164283	ESM1	endocan	endothelial cell specific molecule 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-166	chr5	137978286	137980807	+	42.2	2521	Intergenic	AluSx|SINE|Alu	-68228	NM_004134	3313	Hs.184233	NM_004134	ENSG00000113013	HSPA9	CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4	heat shock protein family A (Hsp70) member 9	protein-coding	42.25	4.85	8.711340206	3.69E-20
chr5-1666	chr5	54521975	54529885	+	156.8	7910	Intergenic	Intergenic	-2787	NM_001190787	345643	Hs.394578	NM_001190787	ENSG00000234602	MCIDAS	IDAS|MCI|MCIN	multiciliate differentiation and DNA synthesis associated cell cycle protein	protein-coding	156.82	31.55	4.970522979	1.55E-44
chr5-1667	chr5	54532690	54533690	+	14.1	1000	Intergenic	MER53|DNA|hAT	-3645	NR_125346	10309	Hs.3041	NM_021147	ENSG00000152669	CCNO	CCNU|CILD29|UDG2	cyclin O	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr5-1669	chr5	55352108	55353108	+	14.7	1000	Intergenic	Intergenic	61613	NR_102755	441072	Hs.482141	NR_102755	ENSG00000227908	FLJ31104	-	uncharacterized LOC441072	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr5-1670	chr5	55360197	55361197	+	14.7	1000	Intergenic	AluSx|SINE|Alu	69702	NR_102755	441072	Hs.482141	NR_102755	ENSG00000227908	FLJ31104	-	uncharacterized LOC441072	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr5-1678	chr5	57755616	57756616	+	15.4	1000	promoter-TSS (NM_001252226)	promoter-TSS (NM_001252226)	-150	NM_001252226	10769	Hs.398157	NM_006622	ENSG00000145632	PLK2	SNK|hPlk2|hSNK	polo like kinase 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-1680	chr5	58478735	58479735	+	14.7	1000	"intron (NM_001165899, intron 6 of 16)"	"intron (NM_001165899, intron 6 of 16)"	92710	NM_001197220	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr5-1683	chr5	59040382	59041382	+	14.1	1000	"intron (NM_001165899, intron 3 of 16)"	"intron (NM_001165899, intron 3 of 16)"	23556	NM_001197218	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr5-1684	chr5	59089877	59090877	+	14.7	1000	"intron (NM_001165899, intron 3 of 16)"	"intron (NM_001165899, intron 3 of 16)"	-25939	NM_001197218	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr5-1687	chr5	60139121	60140926	+	28.8	1805	promoter-TSS (NM_024930)	promoter-TSS (NM_024930)	78	NM_024930	79993	Hs.274256	NM_024930	ENSG00000164181	ELOVL7	-	ELOVL fatty acid elongase 7	protein-coding	28.8	4.37	6.590389016	1.84E-11
chr5-169	chr5	139029001	139030257	+	25	1256	promoter-TSS (NM_001317205)	promoter-TSS (NM_001317205)	-945	NM_001317205	51523	Hs.189119	NM_016463	ENSG00000171604	CXXC5	CF5|HSPC195|RINF|WID	CXXC finger protein 5	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr5-1697	chr5	68315711	68316711	+	14.7	1000	"intron (NR_130778, intron 1 of 3)"	"intron (NR_130778, intron 1 of 3)"	9543	NR_130778	101928885	Hs.630474	NR_130778		LOC101928885	-	uncharacterized LOC101928885	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr5-1698	chr5	71298197	71299197	+	14.7	1000	Intergenic	Intergenic	-104398	NM_005909	4131	Hs.335079	NM_005909	ENSG00000131711	MAP1B	FUTSCH|MAP5|PPP1R102	microtubule associated protein 1B	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr5-1699	chr5	71684361	71685361	+	14.1	1000	Intergenic	L2c|LINE|L2	68667	NM_001284404	79810	Hs.126906	NM_024754	ENSG00000049883	PTCD2	-	pentatricopeptide repeat domain 2	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr5-1700	chr5	71702511	71703511	+	14.1	1000	Intergenic	MIR|SINE|MIR	86817	NM_001284404	79810	Hs.126906	NM_024754	ENSG00000049883	PTCD2	-	pentatricopeptide repeat domain 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr5-1703	chr5	71771086	71772086	+	13.4	1000	"intron (NM_152625, intron 1 of 4)"	"intron (NM_152625, intron 1 of 4)"	31663	NM_152625	167465	Hs.224794	NM_152625	ENSG00000178175	ZNF366	DCSCRIPT	zinc finger protein 366	protein-coding	13.44	1.46	9.205479452	3.57E-07
chr5-1704	chr5	71781265	71782265	+	14.7	1000	"intron (NM_152625, intron 1 of 4)"	L2a|LINE|L2	21484	NM_152625	167465	Hs.224794	NM_152625	ENSG00000178175	ZNF366	DCSCRIPT	zinc finger protein 366	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr5-1706	chr5	72112287	72113287	+	15.4	1000	"intron (NM_002270, intron 1 of 24)"	CpG	369	NM_002270	3842	Hs.482497	NM_002270	ENSG00000083312	TNPO1	IPO2|KPNB2|MIP|MIP1|TRN	transportin 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1709	chr5	72424904	72425904	+	15.4	1000	"intron (NM_001161342, intron 3 of 3)"	MER51A|LTR|ERV1	9016	NM_173490	134285	Hs.162246	NM_173490	ENSG00000157111	TMEM171	PRP2	transmembrane protein 171	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-1711	chr5	72469118	72470118	+	15.4	1000	"exon (NM_153217, exon 1 of 2)"	"exon (NM_153217, exon 1 of 2)"	595	NM_153217	134288	Hs.508588	NM_153217	ENSG00000164325	TMEM174	-	transmembrane protein 174	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-1716	chr5	72634184	72635184	+	14.7	1000	Intergenic	Intergenic	109668	NM_004472	2297	Hs.519385	NM_004472	ENSG00000251493	FOXD1	FKHL8|FREAC-4|FREAC4	forkhead box D1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr5-1718	chr5	72713726	72714726	+	14.1	1000	Intergenic	Intergenic	30126	NM_004472	2297	Hs.519385	NM_004472	ENSG00000251493	FOXD1	FKHL8|FREAC-4|FREAC4	forkhead box D1	protein-coding	14.08	0	14.5040551	3.99E-13
chr5-1721	chr5	72754990	72755990	+	14.7	1000	"intron (NR_126410, intron 4 of 4)"	"intron (NR_126410, intron 4 of 4)"	-11138	NM_004472	2297	Hs.519385	NM_004472	ENSG00000251493	FOXD1	FKHL8|FREAC-4|FREAC4	forkhead box D1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr5-1726	chr5	73138063	73139063	+	15.4	1000	"intron (NM_001244364, intron 3 of 27)"	AluSx|SINE|Alu	29220	NM_001244364	64283	Hs.482521	NM_001080479	ENSG00000214944	ARHGEF28	RGNEF|RIP2|p190RHOGEF	Rho guanine nucleotide exchange factor 28	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1727	chr5	73407526	73408526	+	15.4	1000	Intergenic	Intergenic	196124	NR_105009	102503429	Hs.519391	NR_105009	ENSG00000248942	LINC01335	-	long intergenic non-protein coding RNA 1335	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr5-1728	chr5	73469075	73470075	+	14.1	1000	Intergenic	Intergenic	134575	NR_105009	102503429	Hs.519391	NR_105009	ENSG00000248942	LINC01335	-	long intergenic non-protein coding RNA 1335	ncRNA	14.08	1.46	9.643835616	3.66E-08
chr5-1736	chr5	75377720	75380163	+	34.6	2443	promoter-TSS (NM_014979)	promoter-TSS (NM_014979)	-298	NM_014979	22987	Hs.646953	NM_014979	ENSG00000122012	SV2C	-	synaptic vesicle glycoprotein 2C	protein-coding	34.56	2.43	14.22222222	4.68E-22
chr5-1739	chr5	76647548	76648548	+	14.7	1000	"intron (NM_003719, intron 9 of 21)"	"intron (NM_003719, intron 9 of 21)"	140317	NM_018268	55255	Hs.482573	NM_018268	ENSG00000164253	WDR41	MSTP048	WD repeat domain 41	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr5-174	chr5	148362389	148363389	+	21.1	1000	"3' UTR (NM_024577, exon 17 of 17)"	"3' UTR (NM_024577, exon 17 of 17)"	79848	NM_024577	79628	Hs.483784	NM_024577	ENSG00000169247	SH3TC2	CMT4C|MNMN	SH3 domain and tetratricopeptide repeats 2	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr5-1740	chr5	77253487	77254487	+	14.1	1000	promoter-TSS (NR_105013)	promoter-TSS (NR_105013)	-84	NR_105013	101929154	Hs.252895	NR_105012		LOC101929154	-	uncharacterized LOC101929154	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr5-1742	chr5	79865404	79866673	+	23.7	1269	"5' UTR (NM_001004441, exon 1 of 5)"	"5' UTR (NM_001004441, exon 1 of 5)"	266	NM_001004441	340120	Hs.519404	NM_001004441	ENSG00000189127	ANKRD34B	DP58	ankyrin repeat domain 34B	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr5-1754	chr5	111962352	111963352	+	14.1	1000	Intergenic	Intergenic	-1281	NR_104672	102467214	Hs.124613	NR_104672		LOC102467214	-	uncharacterized LOC102467214	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr5-1757	chr5	112554523	112555523	+	14.1	1000	"intron (NM_001085377, intron 3 of 18)"	"intron (NM_001085377, intron 3 of 18)"	75589	NM_002387	4163	Hs.593171	NM_002387	ENSG00000171444	MCC	MCC1	mutated in colorectal cancers	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr5-1761	chr5	114430279	114431279	+	14.7	1000	Intergenic	Intergenic	74881	NM_001300759	55521	Hs.519514	NM_018700	ENSG00000152503	TRIM36	HAPRIN|RBCC728|RNF98	tripartite motif containing 36	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr5-1762	chr5	115908198	115910033	+	32	1835	"intron (NM_001300780, intron 1 of 19)"	CpG	1507	NM_001300780	57556	Hs.156967	NM_020681	ENSG00000092421	SEMA6A	HT018|SEMA|SEMA6A1|SEMAQ|VIA	semaphorin 6A	protein-coding	32	1.94	16.49484536	5.00E-22
chr5-1764	chr5	122419109	122420109	+	15.4	1000	Intergenic	Intergenic	-5232	NM_001136239	93166	Hs.135118	NM_001136239	ENSG00000061455	PRDM6	KMT8C|PDA3|PRISM	PR/SET domain 6	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-1766	chr5	125928723	125931049	+	43.5	2326	"intron (NM_001202404, intron 1 of 15)"	L2b|LINE|L2	1196	NM_001182	501	Hs.483239	NM_001182	ENSG00000164904	ALDH7A1	ATQ1|EPD|PDE	aldehyde dehydrogenase 7 family member A1	protein-coding	43.53	5.82	7.479381443	9.68E-19
chr5-1772	chr5	131615920	131616920	+	14.1	1000	Intergenic	Intergenic	-13725	NM_003059	6583	Hs.310591	NM_003059	ENSG00000197208	SLC22A4	DFNB60|OCTN1	solute carrier family 22 member 4	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr5-1774	chr5	132159999	132162556	+	38.4	2557	"exon (NM_133456, exon 1 of 7)"	"exon (NM_133456, exon 1 of 7)"	725	NM_133456	134549	Hs.519574	NM_133456	ENSG00000164403	SHROOM1	APXL2	shroom family member 1	protein-coding	38.4	5.82	6.597938144	2.56E-15
chr5-1775	chr5	132363034	132364034	+	13.4	1000	Intergenic	L1MC4a|LINE|L1	-1238	NR_131766	54819	Hs.29700	NM_017665	ENSG00000155329	ZCCHC10	-	zinc finger CCHC-type containing 10	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr5-1779	chr5	132666777	132667777	+	14.1	1000	"intron (NM_015082, intron 4 of 15)"	"intron (NM_015082, intron 4 of 15)"	96121	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr5-1782	chr5	132707802	132709054	+	19.2	1252	"intron (NM_015082, intron 4 of 15)"	"intron (NM_015082, intron 4 of 15)"	54970	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr5-1785	chr5	132729261	132730261	+	14.1	1000	"intron (NM_015082, intron 4 of 15)"	"intron (NM_015082, intron 4 of 15)"	33637	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr5-1787	chr5	132744112	132747007	+	44.8	2895	"intron (NM_015082, intron 3 of 15)"	"intron (NM_015082, intron 3 of 15)"	17839	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA	44.81	8.74	5.127002288	2.02E-14
chr5-1790	chr5	132792670	132794269	+	23	1599	"intron (NM_015082, intron 3 of 15)"	"intron (NM_015082, intron 3 of 15)"	-30071	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA	23.04	1.94	11.87628866	6.71E-14
chr5-1791	chr5	132840124	132841124	+	14.7	1000	"intron (NM_015082, intron 3 of 15)"	L2b|LINE|L2	-77226	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr5-1795	chr5	132866742	132869090	+	37.8	2348	"intron (NM_015082, intron 3 of 15)"	MLT1D|LTR|ERVL-MaLR	80307	NM_015082	23105	Hs.483390	NM_015082	ENSG00000053108	FSTL4	-	follistatin like 4	protein-coding	37.76	6.8	5.552941176	7.17E-13
chr5-1799	chr5	132893943	132894943	+	14.1	1000	"intron (NM_015082, intron 3 of 15)"	"intron (NM_015082, intron 3 of 15)"	53780	NM_015082	23105	Hs.483390	NM_015082	ENSG00000053108	FSTL4	-	follistatin like 4	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr5-1804	chr5	133046445	133047445	+	14.7	1000	Intergenic	Intergenic	-98722	NM_015082	23105	Hs.483390	NM_015082	ENSG00000053108	FSTL4	-	follistatin like 4	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr5-1805	chr5	133054217	133055217	+	13.4	1000	Intergenic	Intergenic	-106494	NM_015082	23105	Hs.483390	NM_015082	ENSG00000053108	FSTL4	-	follistatin like 4	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr5-1807	chr5	133151382	133155938	+	63.4	4556	Intergenic	MIRb|SINE|MIR	-95708	NR_131252	105664404	Hs.582536	NR_131252	ENSG00000249073	WSPAR	LncTCF7|TCONS_00009511	WNT signaling pathway activating non-coding RNA	ncRNA	63.37	10.19	6.218842002	9.63E-23
chr5-1812	chr5	133254339	133255339	+	15.4	1000	Intergenic	Intergenic	5471	NR_131252	105664404	Hs.582536	NR_131252	ENSG00000249073	WSPAR	LncTCF7|TCONS_00009511	WNT signaling pathway activating non-coding RNA	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr5-1815	chr5	133611816	133612816	+	14.7	1000	Intergenic	LTR16B2|LTR|ERVL	-50366	NM_002715	5515	Hs.105818	NM_002715	ENSG00000113575	PPP2CA	PP2Ac|PP2CA|PP2Calpha|RP-C	protein phosphatase 2 catalytic subunit alpha	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr5-1817	chr5	134394251	134395251	+	14.1	1000	"intron (NM_001277348, intron 2 of 5)"	"intron (NM_001277348, intron 2 of 5)"	-19014	NR_105050	101927953	Hs.436898	NR_105049	ENSG00000249082	C5orf66-AS1	CTC-276P9.1|Epist	C5orf66 antisense RNA 1	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr5-1818	chr5	134437048	134438048	+	14.1	1000	"intron (NM_001277348, intron 2 of 5)"	"intron (NM_001277348, intron 2 of 5)"	-61811	NR_105050	101927953	Hs.436898	NR_105049	ENSG00000249082	C5orf66-AS1	CTC-276P9.1|Epist	C5orf66 antisense RNA 1	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr5-1819	chr5	134495292	134496292	+	13.4	1000	"intron (NM_001277348, intron 2 of 5)"	MLT1D-int|LTR|ERVL-MaLR	88075	NR_037895	340073	Hs.434422	NR_037895	ENSG00000249647	C5orf66-AS2	-	C5orf66 antisense RNA 2	ncRNA	13.44	0	13.84477987	1.16E-11
chr5-1820	chr5	134499982	134500982	+	14.1	1000	"intron (NM_001277348, intron 2 of 5)"	Charlie4|DNA|hAT-Charlie	83385	NR_037895	340073	Hs.434422	NR_037895	ENSG00000249647	C5orf66-AS2	-	C5orf66 antisense RNA 2	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr5-1823	chr5	134802275	134803275	+	14.7	1000	Intergenic	MIRb|SINE|MIR	-14686	NM_001099221	497189	Hs.552091	NM_001099221	ENSG00000255833	TIFAB	-	TIFA inhibitor	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr5-1825	chr5	134839332	134840918	+	24.3	1586	Intergenic	Intergenic	31514	NM_006161	4762	Hs.248149	NM_006161	ENSG00000181965	NEUROG1	AKA|Math4C|NEUROD3|bHLHa6|ngn1	neurogenin 1	protein-coding	24.32	3.4	7.152941176	7.55E-11
chr5-1827	chr5	134878670	134883035	+	82.6	4365	Intergenic	Intergenic	-9213	NM_006161	4762	Hs.248149	NM_006161	ENSG00000181965	NEUROG1	AKA|Math4C|NEUROD3|bHLHa6|ngn1	neurogenin 1	protein-coding	82.57	11.16	7.39874552	2.33E-33
chr5-1828	chr5	134942572	134943572	+	14.1	1000	Intergenic	(CATG)n|Simple_repeat|Simple_repeat	-28103	NM_004887	9547	Hs.483444	NM_004887	ENSG00000145824	CXCL14	BMAC|BRAK|KEC|KS1|MIP-2g|MIP2G|NJAC|SCYB14	C-X-C motif chemokine ligand 14	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr5-1831	chr5	135273530	135274781	+	17.9	1251	"intron (NR_132347, intron 6 of 7)"	L2a|LINE|L2	8149	NR_132347	26223	Hs.591275	NM_012159		FBXL21	FBL3B|FBXL3B|FBXL3P|Fbl21	F-box and leucine rich repeat protein 21 (gene/pseudogene)	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr5-1836	chr5	137610855	137611855	+	14.1	1000	Intergenic	Intergenic	-1102	NM_001496	2676	Hs.58042	NM_001496	ENSG00000146013	GFRA3	GDNFR3	GDNF family receptor alpha 3	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr5-1841	chr5	138000578	138003408	+	46.7	2830	Intergenic	Intergenic	87005	NR_134245	105379194	Hs.445981	NR_134244	ENSG00000253404	LOC105379194	-	uncharacterized LOC105379194	ncRNA	46.73	8.74	5.346681922	3.81E-15
chr5-1843	chr5	139133998	139137756	+	72.3	3758	Intergenic	CpG	-10069	NR_105053	101929696	Hs.147408	NR_105052	ENSG00000249131	PSD2-AS1	-	PSD2 antisense RNA 1	ncRNA	72.33	15.05	4.805980066	1.18E-20
chr5-1844	chr5	139143371	139144371	+	14.7	1000	Intergenic	L2b|LINE|L2	-18063	NR_105053	101929696	Hs.147408	NR_105052	ENSG00000249131	PSD2-AS1	-	PSD2 antisense RNA 1	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr5-1853	chr5	139332173	139336117	+	52.5	3944	"intron (NM_013983, intron 1 of 10)"	"intron (NM_013983, intron 1 of 10)"	88739	NM_004883	9542	Hs.408515	NM_004883	ENSG00000158458	NRG2	DON1|HRG2|NTAK	neuregulin 2	protein-coding	52.49	10.68	4.914794007	5.24E-16
chr5-1858	chr5	139437113	139438113	+	15.4	1000	Intergenic	Intergenic	-14729	NM_013983	9542	Hs.408515	NM_004883	ENSG00000158458	NRG2	DON1|HRG2|NTAK	neuregulin 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr5-1859	chr5	139467865	139468865	+	13.4	1000	Intergenic	AluSc8|SINE|Alu	19232	NR_102741	100505636	Hs.438871	NR_102739	ENSG00000245146	LINC01024	MA-linc1	long intergenic non-protein coding RNA 1024	ncRNA	13.44	1.46	9.205479452	3.57E-07
chr5-1864	chr5	141243589	141244589	+	15.4	1000	"exon (NM_032420, exon 3 of 5)"	"exon (NM_032420, exon 3 of 5)"	1678	NM_001278615	5097	Hs.79769	NM_002587	ENSG00000156453	PCDH1	PC42|PCDH42	protocadherin 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1868	chr5	141271520	141272520	+	14.1	1000	Intergenic	MER31-int|LTR|ERV1	4240	NR_033244	729080	Hs.730564	NR_033244		LOC729080	-	glycine cleavage system protein H (aminomethyl carrier) pseudogene	pseudo	14.08	2.91	4.838487973	2.67E-05
chr5-187	chr5	38196557	38197557	+	21.1	1000	Intergenic	ERVL-E-int|LTR|ERVL	48475	NR_134272	101929745	Hs.374715	NR_134272	ENSG00000248461	LINC02119	-	long intergenic non-protein coding RNA 2119	ncRNA	21.12	4.85	4.354639175	2.52E-06
chr5-1871	chr5	141615933	141616933	+	14.1	1000	Intergenic	LTR2|LTR|ERV1	81454	NR_131221	100642175	Hs.684549	NR_131221	ENSG00000281881	SPRY4-IT1	SPRIGHTLY	SPRY4 intronic transcript 1	ncRNA	14.08	0	14.5040551	3.99E-13
chr5-1875	chr5	141710909	141711909	+	14.1	1000	"intron (NR_120664, intron 1 of 3)"	MIR|SINE|MIR	6551	NR_120664	101926941	Hs.658945	NR_120664	ENSG00000231185	LOC101926941	-	uncharacterized LOC101926941	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr5-1876	chr5	141735076	141739178	+	52.5	4102	"intron (NR_120664, intron 3 of 3)"	MIRb|SINE|MIR	32269	NR_120664	101926941	Hs.658945	NR_120664	ENSG00000231185	LOC101926941	-	uncharacterized LOC101926941	ncRNA	52.49	11.16	4.703405018	2.24E-15
chr5-1881	chr5	144230261	144231261	+	14.1	1000	Intergenic	HERV9-int|LTR|ERV1	680324	NM_020768	57528	Hs.7093	NM_020768	ENSG00000183775	KCTD16	-	potassium channel tetramerization domain containing 16	protein-coding	14.08	0.49	28.73469388	3.99E-13
chr5-1882	chr5	145425934	145426934	+	14.1	1000	"intron (NM_152550, intron 5 of 9)"	AluJr|SINE|Alu	57512	NM_001029869	153770	Hs.162369	NM_001029869	ENSG00000173261	PLAC8L1	-	PLAC8 like 1	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr5-1883	chr5	145446851	145448919	+	30.1	2068	Intergenic	Intergenic	36061	NM_001029869	153770	Hs.162369	NM_001029869	ENSG00000173261	PLAC8L1	-	PLAC8 like 1	protein-coding	30.08	5.82	5.16838488	6.85E-10
chr5-1886	chr5	145784443	145785443	+	14.1	1000	Intergenic	Intergenic	-41930	NM_001040006	10915	Hs.443465	NM_006706	ENSG00000113649	TCERG1	CA150|TAF2S|Urn1	transcription elongation regulator 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr5-1888	chr5	146183616	146185100	+	18.6	1484	"intron (NM_001271899, intron 2 of 9)"	"intron (NM_001271899, intron 2 of 9)"	73990	NM_001271948	5521	Hs.627618	NM_181674	ENSG00000156475	PPP2R2B	B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12	protein phosphatase 2 regulatory subunit Bbeta	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr5-1891	chr5	146744687	146745687	+	14.1	1000	"intron (NM_001287740, intron 8 of 13)"	"intron (NM_001287740, intron 8 of 13)"	88073	NM_001387	1809	Hs.519659	NM_001387	ENSG00000113657	DPYSL3	CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1	dihydropyrimidinase like 3	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr5-1893	chr5	146825466	146826942	+	22.4	1476	"intron (NM_001197294, intron 1 of 13)"	"intron (NM_001197294, intron 1 of 13)"	7056	NM_001387	1809	Hs.519659	NM_001387	ENSG00000113657	DPYSL3	CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1	dihydropyrimidinase like 3	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr5-1895	chr5	148177314	148178314	+	15.4	1000	Intergenic	Intergenic	-28342	NM_000024	154	Hs.2551	NM_000024	ENSG00000169252	ADRB2	ADRB2R|ADRBR|B2AR|BAR|BETA2AR	adrenoceptor beta 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr5-1900	chr5	148679623	148681221	+	23.7	1598	"intron (NM_001146337, intron 3 of 17)"	MIRc|SINE|MIR	29021	NM_152406	134265	Hs.62930	NM_152406	ENSG00000157510	AFAP1L1	-	actin filament associated protein 1 like 1	protein-coding	23.68	5.34	4.434456929	4.49E-07
chr5-1904	chr5	149570676	149571676	+	14.1	1000	"intron (NM_014228, intron 1 of 13)"	AluY|SINE|Alu	1752	NM_014228	6534	Hs.241597	NM_014228	ENSG00000011083	SLC6A7	PROT	solute carrier family 6 member 7	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr5-1909	chr5	149653474	149655169	+	25.6	1695	"intron (NM_171825, intron 1 of 17)"	MIR3|SINE|MIR	15082	NM_015981	815	Hs.743976	NM_015981	ENSG00000070808	CAMK2A	CAMKA	calcium/calmodulin dependent protein kinase II alpha	protein-coding	25.6	2.91	8.797250859	6.53E-13
chr5-1911	chr5	149708822	149710122	+	19.2	1300	Intergenic	Intergenic	-26947	NM_001012301	340075	Hs.591252	NM_001012301	ENSG00000183876	ARSI	ASI|SPG66	arylsulfatase family member I	protein-coding	19.2	1.46	13.15068493	1.82E-12
chr5-1913	chr5	149844965	149845965	+	13.4	1000	Intergenic	Intergenic	-16146	NM_001025071	6208	Hs.744846	NM_005617	ENSG00000164587	RPS14	EMTB|S14	ribosomal protein S14	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr5-1924	chr5	150365940	150366940	+	13.4	1000	Intergenic	LTR46|LTR|ERV1	-33533	NM_001329790	2878	Hs.386793	NM_002084	ENSG00000211445	GPX3	GPx-P|GSHPx-3|GSHPx-P	glutathione peroxidase 3	protein-coding	13.44	2.43	5.530864198	2.99E-05
chr5-1925	chr5	150728693	150730305	+	26.2	1612	Intergenic	Intergenic	-2348	NM_181776	153201	Hs.483877	NM_181776	ENSG00000186335	SLC36A2	PAT2|TRAMD1	solute carrier family 36 member 2	protein-coding	26.24	5.34	4.913857678	2.00E-08
chr5-1926	chr5	150924682	150925682	+	15.4	1000	"exon (NM_001447, exon 9 of 23)"	"exon (NM_001447, exon 9 of 23)"	23323	NM_001447	2196	Hs.591255	NM_001447	ENSG00000086570	FAT2	CDHF8|CDHR9|HFAT2|MEGF1	FAT atypical cadherin 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-1932	chr5	151283194	151284194	+	14.1	1000	"intron (NM_001146040, intron 1 of 8)"	"intron (NM_001146040, intron 1 of 8)"	20703	NM_001292000	2741	Hs.121490	NM_000171	ENSG00000145888	GLRA1	HKPX1|STHE	glycine receptor alpha 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr5-1934	chr5	151291100	151292100	+	14.7	1000	"intron (NM_001146040, intron 1 of 8)"	"intron (NM_001146040, intron 1 of 8)"	12797	NM_001292000	2741	Hs.121490	NM_000171	ENSG00000145888	GLRA1	HKPX1|STHE	glycine receptor alpha 1	protein-coding	14.72	0	15.16333034	3.99E-13
chr5-1938	chr5	153531256	153532256	+	15.4	1000	Intergenic	AluJr|SINE|Alu	-38539	NM_198321	55568	Hs.631797	NM_017540	ENSG00000164574	GALNT10	GALNACT10|PPGALNACT10|PPGANTASE10	polypeptide N-acetylgalactosaminyltransferase 10	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-194	chr5	56613682	56614938	+	23.7	1256	Intergenic	Intergenic	104409	NM_001127236	65056	Hs.444279	NM_022913	ENSG00000062194	GPBP1	GPBP|SSH6|VASCULIN	GC-rich promoter binding protein 1	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr5-1942	chr5	153922485	153923485	+	14.1	1000	Intergenic	MLT1H|LTR|ERVL-MaLR	52647	NR_036094	100422950		NR_036094	ENSG00000264760	MIR3141	mir-3141	microRNA 3141	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr5-1948	chr5	155364821	155365821	+	15.4	1000	Intergenic	Intergenic	-388446	NM_172244	6444	Hs.387207	NM_000337	ENSG00000170624	SGCD	35DAG|CMD1L|DAGD|SG-delta|SGCDP|SGD	sarcoglycan delta	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr5-1949	chr5	155380295	155381295	+	14.7	1000	Intergenic	Intergenic	-372972	NM_172244	6444	Hs.387207	NM_000337	ENSG00000170624	SGCD	35DAG|CMD1L|DAGD|SG-delta|SGCDP|SGD	sarcoglycan delta	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr5-1951	chr5	156115461	156116461	+	14.1	1000	"intron (NM_001128209, intron 6 of 7)"	MIRb|SINE|MIR	-161588	NR_038443	153743	Hs.567727	NM_206858	ENSG00000231989	PPP1R2P3	-	protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 3	pseudo	14.08	2.91	4.838487973	2.67E-05
chr5-1953	chr5	156837273	156838273	+	15.4	1000	"intron (NR_136204, intron 1 of 3)"	L1PA14|LINE|L1	-49254	NM_001172292	348938	Hs.4285	NM_001099287	ENSG00000172548	NIPAL4	ARCI6|ICHTHYIN|ICHYN	NIPA like domain containing 4	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-196	chr5	74347674	74350532	+	59.5	2858	promoter-TSS (NR_126375)	promoter-TSS (NR_126375)	-635	NR_126375	104326191	Hs.582288	NR_126375	ENSG00000250889	LINC01336	-	long intergenic non-protein coding RNA 1336	ncRNA	59.53	7.28	8.177197802	3.73E-26
chr5-1960	chr5	157383370	157384370	+	14.1	1000	Intergenic	MIRb|SINE|MIR	-97687	NM_001195556	9685	Hs.644000	NM_014666	ENSG00000113282	CLINT1	CLINT|ENTH|EPN4|EPNR	clathrin interactor 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr5-1964	chr5	157589668	157592509	+	38.4	2841	Intergenic	Intergenic	245693	NR_109888	101927697	Hs.483960	NR_109888	ENSG00000276778	LOC101927697	-	uncharacterized LOC101927697	ncRNA	38.4	7.28	5.274725275	6.93E-13
chr5-1967	chr5	158104944	158106289	+	19.2	1345	Intergenic	Intergenic	-268835	NR_109888	101927697	Hs.483960	NR_109888	ENSG00000276778	LOC101927697	-	uncharacterized LOC101927697	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr5-1972	chr5	158456182	158457182	+	15.4	1000	"intron (NM_182708, intron 5 of 14)"	AluSq2|SINE|Alu	70088	NM_001324101	1879	Hs.573143	NM_024007	ENSG00000164330	EBF1	COE1|EBF|O/E-1|OLF1	early B-cell factor 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-1973	chr5	158466702	158467702	+	15.4	1000	"intron (NM_182708, intron 5 of 14)"	"intron (NM_182708, intron 5 of 14)"	59568	NM_001324101	1879	Hs.573143	NM_024007	ENSG00000164330	EBF1	COE1|EBF|O/E-1|OLF1	early B-cell factor 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr5-1980	chr5	159243196	159244196	+	14.7	1000	"intron (NR_109891, intron 2 of 2)"	"intron (NR_109891, intron 2 of 2)"	54695	NR_109891	101927766	Hs.638568	NR_109891	ENSG00000253311	LINC01847	-	long intergenic non-protein coding RNA 1847	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr5-1981	chr5	159284988	159285988	+	14.1	1000	"intron (NR_109891, intron 2 of 2)"	"intron (NR_109891, intron 2 of 2)"	12903	NR_109891	101927766	Hs.638568	NR_109891	ENSG00000253311	LINC01847	-	long intergenic non-protein coding RNA 1847	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr5-1986	chr5	159794736	159798375	+	62.7	3639	"intron (NM_031908, intron 1 of 2)"	"intron (NM_031908, intron 1 of 2)"	1093	NM_031908	114898	Hs.110062	NM_031908	ENSG00000145861	C1QTNF2	CTRP2|zacrp2	C1q and tumor necrosis factor related protein 2	protein-coding	62.73	10.68	5.873595506	6.50E-22
chr5-1988	chr5	160974373	160975373	+	14.7	1000	"intron (NM_021911, intron 1 of 10)"	CpG	257	NM_021911	2561	Hs.303527	NM_000813	ENSG00000145864	GABRB2	-	gamma-aminobutyric acid type A receptor beta2 subunit	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr5-1989	chr5	162526689	162527689	+	15.4	1000	Intergenic	MLT1K|LTR|ERVL-MaLR	-337388	NM_199246	900	Hs.79101	NM_004060	ENSG00000113328	CCNG1	CCNG	cyclin G1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-199	chr5	111755100	111756696	+	27.5	1596	promoter-TSS (NM_001347887)	promoter-TSS (NM_001347887)	618	NR_027706	54508	Hs.591264	NR_027706	ENSG00000278921	EPB41L4A-AS2	-	EPB41L4A antisense RNA 2 (head to head)	ncRNA	27.52	5.82	4.728522337	1.71E-08
chr5-1992	chr5	167874855	167875855	+	15.4	1000	"intron (NM_015238, intron 17 of 22)"	"intron (NM_015238, intron 17 of 22)"	-38108	NM_002887	5917	Hs.654907	NM_002887	ENSG00000113643	RARS	ArgRS|DALRD1|HLD9	arginyl-tRNA synthetase	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr5-1993	chr5	168033988	168034988	+	15.4	1000	Intergenic	HERV16-int|LTR|ERVL	-27874	NM_024594	79646	Hs.388400	NM_024594	ENSG00000120137	PANK3	-	pantothenate kinase 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr5-1994	chr5	168120589	168121589	+	14.1	1000	"intron (NM_003062, intron 28 of 35)"	"intron (NM_003062, intron 28 of 35)"	-12843	NR_130737	101927969	Hs.661903	NR_130737		LOC101927969	-	uncharacterized LOC101927969	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr5-1995	chr5	168187044	168190396	+	42.9	3352	"intron (NM_003062, intron 15 of 35)"	"intron (NM_003062, intron 15 of 35)"	6540	NR_029632	407001		NR_029632	ENSG00000207739	MIR218-2	MIRN218-2|mir-218-2	microRNA 218-2	ncRNA	42.89	5.82	7.369415808	7.27E-18
chr5-2004	chr5	169919975	169921615	+	22.4	1640	"intron (NM_001034838, intron 1 of 7)"	L2b|LINE|L2	-10245	NM_001278339	30820	Hs.484111	NM_014592	ENSG00000182132	KCNIP1	KCHIP1|VABP	potassium voltage-gated channel interacting protein 1	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr5-2007	chr5	169962808	169963808	+	15.4	1000	"intron (NM_014592, intron 1 of 7)"	MIRb|SINE|MIR	32268	NM_001278340	30820	Hs.484111	NM_014592	ENSG00000182132	KCNIP1	KCHIP1|VABP	potassium voltage-gated channel interacting protein 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-2008	chr5	169996842	169997842	+	14.7	1000	"intron (NM_014592, intron 1 of 7)"	"intron (NM_014592, intron 1 of 7)"	66302	NM_001278340	30820	Hs.484111	NM_014592	ENSG00000182132	KCNIP1	KCHIP1|VABP	potassium voltage-gated channel interacting protein 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr5-2011	chr5	170054051	170055415	+	19.8	1364	"intron (NM_014592, intron 1 of 7)"	"intron (NM_014592, intron 1 of 7)"	53741	NR_136214	105377716	Hs.570880	NR_136214	ENSG00000253591	LOC105377716	-	uncharacterized LOC105377716	ncRNA	19.84	3.4	5.835294118	1.47E-07
chr5-2014	chr5	170237528	170238528	+	14.1	1000	"intron (NM_014211, intron 9 of 9)"	"intron (NM_014211, intron 9 of 9)"	27305	NM_014211	2568	Hs.26225	NM_014211	ENSG00000094755	GABRP	-	gamma-aminobutyric acid type A receptor pi subunit	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr5-2016	chr5	170418082	170419082	+	14.1	1000	"intron (NM_022897, intron 14 of 27)"	MIRb|SINE|MIR	129696	NM_022897	64901	Hs.410810	NM_022897	ENSG00000204764	RANBP17	-	RAN binding protein 17	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr5-2019	chr5	170745833	170746833	+	12.8	1000	Intergenic	Intergenic	10045	NM_021025	30012	Hs.249125	NM_021025	ENSG00000164438	TLX3	HOX11L2|RNX	T-cell leukemia homeobox 3	protein-coding	12.8	2.43	5.267489712	2.99E-05
chr5-2022	chr5	170970352	170971882	+	19.8	1530	Intergenic	MIRb|SINE|MIR	124450	NM_003862	8817	Hs.87191	NM_003862	ENSG00000156427	FGF18	FGF-18|ZFGF5	fibroblast growth factor 18	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr5-2025	chr5	171053280	171055447	+	30.1	2167	Intergenic	Intergenic	-158513	NM_001289970	644994	Hs.591740	NM_001289970		SMIM23	C5orf50	small integral membrane protein 23	protein-coding	30.08	5.82	5.16838488	6.85E-10
chr5-2029	chr5	171783904	171784904	+	14.7	1000	"intron (NM_001017995, intron 8 of 12)"	AluSz|SINE|Alu	71803	NR_130933	100288254	Hs.531911	NM_001007542		LOC100288254	-	uncharacterized LOC100288254	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr5-2031	chr5	171862730	171864470	+	27.5	1740	"intron (NM_001017995, intron 1 of 12)"	"intron (NM_001017995, intron 1 of 12)"	17927	NM_001308175	285590	Hs.285666	NM_001017995	ENSG00000174705	SH3PXD2B	FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4	SH3 and PX domains 2B	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr5-2035	chr5	171922167	171923728	+	19.8	1561	Intergenic	MIRb|SINE|MIR	-41420	NM_001017995	285590	Hs.285666	NM_001017995	ENSG00000174705	SH3PXD2B	FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4	SH3 and PX domains 2B	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr5-2037	chr5	171947906	171948906	+	15.4	1000	Intergenic	L1MEe|LINE|L1	-66879	NM_001017995	285590	Hs.285666	NM_001017995	ENSG00000174705	SH3PXD2B	FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4	SH3 and PX domains 2B	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-2041	chr5	172006123	172007123	+	14.1	1000	Intergenic	Intergenic	-61646	NM_001308178	54492	Hs.91521	NM_001142651	ENSG00000214357	NEURL1B	NEURL3|hNeur2|neur2	neuralized E3 ubiquitin protein ligase 1B	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr5-2042	chr5	172018039	172019039	+	15.4	1000	Intergenic	L1M5|LINE|L1	-49730	NM_001308178	54492	Hs.91521	NM_001142651	ENSG00000214357	NEURL1B	NEURL3|hNeur2|neur2	neuralized E3 ubiquitin protein ligase 1B	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-2046	chr5	172090433	172091433	+	14.7	1000	"intron (NM_001308177, intron 1 of 3)"	"intron (NM_001308177, intron 1 of 3)"	1765	NR_049799	100847029		NR_049799	ENSG00000265160	MIR5003	-	microRNA 5003	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr5-2047	chr5	172130918	172133869	+	37.1	2951	Intergenic	AluSx|SINE|Alu	43225	NR_049799	100847029		NR_049799	ENSG00000265160	MIR5003	-	microRNA 5003	ncRNA	37.12	4.37	8.494279176	1.21E-17
chr5-2049	chr5	172604608	172605608	+	14.7	1000	Intergenic	Intergenic	33663	NM_013979	662	Hs.145726	NM_001205	ENSG00000113734	BNIP1	NIP1|SEC20|TRG-8	BCL2 interacting protein 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr5-2054	chr5	172664648	172667303	+	57	2655	Intergenic	CpG	-3660	NM_004387	1482	Hs.54473	NM_004387	ENSG00000183072	NKX2-5	CHNG5|CSX|CSX1|HLHS2|NKX2.5|NKX2E|NKX4-1|VSD3	NK2 homeobox 5	protein-coding	56.97	6.8	8.377941176	1.67E-25
chr5-2055	chr5	172998124	172999124	+	15.4	1000	Intergenic	MSTB1|LTR|ERVL-MaLR	-8013	NR_027108	285593	Hs.409730	NR_027108	ENSG00000253955	LOC285593	-	uncharacterized LOC285593	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr5-2056	chr5	174159631	174160631	+	14.1	1000	Intergenic	Intergenic	8556	NM_002449	4488	Hs.89404	NM_002449	ENSG00000120149	MSX2	CRS2|FPP|HOX8|MSH|PFM|PFM1	msh homeobox 2	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr5-2057	chr5	176243485	176244485	+	14.7	1000	"intron (NM_133369, intron 1 of 14)"	"intron (NM_133369, intron 1 of 14)"	6425	NM_133369	90249	Hs.33191	NM_133369	ENSG00000113763	UNC5A	UNC5H1	unc-5 netrin receptor A	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr5-2058	chr5	180480362	180481362	+	14.7	1000	"intron (NM_001308245, intron 6 of 10)"	CpG-21574	-10378	NR_107056	102465882		NR_107056	ENSG00000277912	MIR8089	hsa-mir-8089	microRNA 8089	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr5-2059	chr5	180542582	180543582	+	14.1	1000	Intergenic	Intergenic	9222	NM_001258283	26693	Hs.742585	NM_001258283	ENSG00000185372	OR2V1	OR2V1P|OST265	olfactory receptor family 2 subfamily V member 1	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr5-209	chr5	139025504	139026804	+	23	1300	promoter-TSS (NM_001317201)	promoter-TSS (NM_001317201)	-730	NM_001317201	51523	Hs.189119	NM_016463	ENSG00000171604	CXXC5	CF5|HSPC195|RINF|WID	CXXC finger protein 5	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr5-210	chr5	139225958	139227259	+	23	1301	"3' UTR (NM_001184935, exon 8 of 8)"	"3' UTR (NM_001184935, exon 8 of 8)"	51202	NM_032289	84249	Hs.21963	NM_032289	ENSG00000146005	PSD2	EFA6C	pleckstrin and Sec7 domain containing 2	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr5-216	chr5	141410415	141411919	+	26.2	1504	Intergenic	MLT1F2|LTR|ERVL-MaLR	-18547	NM_005471	10007	Hs.633853	NM_005471	ENSG00000113552	GNPDA1	GNP1|GNPDA|GNPI|GPI|HLN	glucosamine-6-phosphate deaminase 1	protein-coding	26.24	5.34	4.913857678	2.00E-08
chr5-217	chr5	149600385	149601641	+	21.1	1256	"3' UTR (NM_015981, exon 19 of 19)"	"3' UTR (NM_015981, exon 19 of 19)"	31589	NM_014228	6534	Hs.241597	NM_014228	ENSG00000011083	SLC6A7	PROT	solute carrier family 6 member 7	protein-coding	21.12	0	21.75608266	5.97E-21
chr5-218	chr5	149861794	149869178	+	115.9	7384	promoter-TSS (NR_105061)	promoter-TSS (NR_105061)	69	NR_105061	102546298	Hs.570892	NR_105061	ENSG00000254333	NDST1-AS1	-	NDST1 antisense RNA 1	ncRNA	115.85	16.99	6.818716892	1.56E-43
chr5-23	chr5	15499452	15501617	+	42.2	2165	"5' UTR (NM_012304, exon 1 of 4)"	"5' UTR (NM_012304, exon 1 of 4)"	229	NM_012304	23194	Hs.433057	NM_012304	ENSG00000183580	FBXL7	FBL6|FBL7	F-box and leucine rich repeat protein 7	protein-coding	42.25	3.4	12.42647059	8.57E-25
chr5-232	chr5	7744781	7746057	+	21.8	1276	"intron (NM_020546, intron 15 of 24)"	"intron (NM_020546, intron 15 of 24)"	106184	NM_001089584	134121	Hs.709979	NM_001089584	ENSG00000215217	C5orf49	-	chromosome 5 open reading frame 49	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr5-236	chr5	36535736	36536736	+	20.5	1000	Intergenic	Intergenic	-70221	NM_001166696	6507	Hs.481918	NM_004172	ENSG00000079215	SLC1A3	EA6|EAAT1|GLAST|GLAST1	solute carrier family 1 member 3	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr5-240	chr5	54471214	54472841	+	27.5	1627	Intergenic	Intergenic	-3022	NM_001170402	166979	Hs.669184	NM_152623	ENSG00000164287	CDC20B	G6VTS76519	cell division cycle 20B	protein-coding	27.52	2.91	9.457044674	7.03E-14
chr5-242	chr5	65588799	65590104	+	28.2	1305	Intergenic	Intergenic	148788	NM_139168	140890	Hs.49367	NM_139168	ENSG00000153914	SREK1	SFRS12|SRrp508|SRrp86	splicing regulatory glutamic acid and lysine rich protein 1	protein-coding	28.16	6.31	4.462757528	1.42E-08
chr5-248	chr5	77943475	77944475	+	20.5	1000	"intron (NM_005779, intron 1 of 4)"	CpG	673	NM_005779	10184	Hs.79299	NM_005779	ENSG00000145685	LHFPL2	-	lipoma HMGIC fusion partner-like 2	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr5-251	chr5	112422707	112423707	+	20.5	1000	"intron (NM_001085377, intron 8 of 18)"	"intron (NM_001085377, intron 8 of 18)"	110800	NM_001242377	167227	Hs.443875	NM_152624	ENSG00000172795	DCP2	NUDT20	decapping mRNA 2	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr5-253	chr5	119798169	119801272	+	54.4	3103	promoter-TSS (NM_001300783)	promoter-TSS (NM_001300783)	-253	NM_016644	51334	Hs.157461	NM_016644	ENSG00000184838	PRR16	DSC54|LARGEN	proline rich 16	protein-coding	54.41	6.8	8.001470588	1.13E-23
chr5-258	chr5	132906815	132908664	+	31.4	1849	"intron (NM_015082, intron 2 of 15)"	L1ME3A|LINE|L1	40484	NM_015082	23105	Hs.483390	NM_015082	ENSG00000053108	FSTL4	-	follistatin like 4	protein-coding	31.36	5.82	5.388316151	1.29E-10
chr5-264	chr5	135551119	135552119	+	19.8	1000	"intron (NM_020389, intron 11 of 11)"	MLT1E2|LTR|ERVL-MaLR	-10724	NR_133682	106478968	Hs.637713	NR_133682	ENSG00000250947	TRPC7-AS2	CTB-28J9.2	TRPC7 antisense RNA 2	ncRNA	19.84	0.97	20.45360825	5.65E-15
chr5-265	chr5	138037041	138038349	+	22.4	1308	Intergenic	Intergenic	51303	NR_134245	105379194	Hs.445981	NR_134244	ENSG00000253404	LOC105379194	-	uncharacterized LOC105379194	ncRNA	22.4	3.88	5.773195876	2.53E-08
chr5-266	chr5	139075675	139076675	+	20.5	1000	Intergenic	Intergenic	21150	NM_001317209	51523	Hs.189119	NM_016463	ENSG00000171604	CXXC5	CF5|HSPC195|RINF|WID	CXXC finger protein 5	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr5-268	chr5	139281742	139285726	+	58.2	3984	"intron (NM_013983, intron 1 of 10)"	CpG	108328	NM_032289	84249	Hs.21963	NM_032289	ENSG00000146005	PSD2	EFA6C	pleckstrin and Sec7 domain containing 2	protein-coding	58.25	10.19	5.716388616	1.24E-19
chr5-269	chr5	139373787	139375393	+	27.5	1606	"intron (NM_013983, intron 1 of 10)"	"intron (NM_013983, intron 1 of 10)"	48294	NM_004883	9542	Hs.408515	NM_004883	ENSG00000158458	NRG2	DON1|HRG2|NTAK	neuregulin 2	protein-coding	27.52	5.82	4.728522337	1.71E-08
chr5-275	chr5	150936461	150937998	+	27.5	1537	"intron (NM_001447, intron 2 of 22)"	MLT1K|LTR|ERVL-MaLR	11276	NM_001447	2196	Hs.591255	NM_001447	ENSG00000086570	FAT2	CDHF8|CDHR9|HFAT2|MEGF1	FAT atypical cadherin 2	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr5-276	chr5	151338725	151339725	+	19.8	1000	"intron (NR_109876, intron 1 of 2)"	L3|LINE|CR1	766	NR_109876	101927115	Hs.549665	NR_109876	ENSG00000254226	LINC01933	CTB-12O2.1	long intergenic non-protein coding RNA 1933	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr5-277	chr5	157599096	157600096	+	19.2	1000	Intergenic	MIR|SINE|MIR	237185	NR_109888	101927697	Hs.483960	NR_109888	ENSG00000276778	LOC101927697	-	uncharacterized LOC101927697	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr5-280	chr5	171776382	171777981	+	33.3	1599	"intron (NM_001017995, intron 10 of 12)"	MIRb|SINE|MIR	64580	NR_130933	100288254	Hs.531911	NM_001007542		LOC100288254	-	uncharacterized LOC100288254	ncRNA	33.28	2.91	11.43642612	5.32E-19
chr5-284	chr5	172068599	172070505	+	31.4	1906	"intron (NM_001308177, intron 1 of 3)"	"intron (NM_001308177, intron 1 of 3)"	1283	NM_001142651	54492	Hs.91521	NM_001142651	ENSG00000214357	NEURL1B	NEURL3|hNeur2|neur2	neuralized E3 ubiquitin protein ligase 1B	protein-coding	31.36	5.34	5.872659176	2.29E-11
chr5-286	chr5	1853956	1854956	+	19.2	1000	Intergenic	AluJo|SINE|Alu	2226	NR_104602	101929034	Hs.128032	NR_104602	ENSG00000250417	LINC02116	-	long intergenic non-protein coding RNA 2116	ncRNA	19.2	2.43	7.901234568	1.91E-09
chr5-287	chr5	2223808	2224808	+	18.6	1000	Intergenic	Intergenic	88007	NR_104616	100506858	Hs.445071	NR_104616		LOC100506858	-	uncharacterized LOC100506858	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr5-291	chr5	31646835	31649079	+	42.9	2244	"intron (NM_178140, intron 1 of 24)"	MIR|SINE|MIR	8440	NM_178140	23037	Hs.481819	NM_015022	ENSG00000133401	PDZD2	AIPC|PAPIN|PDZK3|PIN1	PDZ domain containing 2	protein-coding	42.89	7.28	5.891483516	3.82E-15
chr5-30	chr5	141255533	141257890	+	51.2	2357	"intron (NM_002587, intron 1 of 2)"	CpG	1264	NM_002587	5097	Hs.79769	NM_002587	ENSG00000156453	PCDH1	PC42|PCDH42	protocadherin 1	protein-coding	51.21	5.82	8.798969072	3.04E-24
chr5-301	chr5	65892655	65894200	+	32	1545	"intron (NM_198828, intron 1 of 5)"	CpG	1251	NM_198828	375449	Hs.595458	NM_015183	ENSG00000069020	MAST4	-	microtubule associated serine/threonine kinase family member 4	protein-coding	32	5.82	5.498281787	2.32E-11
chr5-309	chr5	83678992	83679992	+	17.9	1000	"intron (NM_001278642, intron 1 of 9)"	"intron (NM_001278642, intron 1 of 9)"	1193	NM_005711	10085	Hs.482730	NM_005711	ENSG00000164176	EDIL3	DEL1	EGF like repeats and discoidin domains 3	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr5-31	chr5	154026081	154027350	+	30.1	1269	Intergenic	Intergenic	-38621	NR_031638	100302284		NR_031638	ENSG00000221552	MIR1303	MIRN1303|hsa-mir-1303	microRNA 1303	ncRNA	30.08	6.8	4.423529412	1.16E-08
chr5-312	chr5	133012088	133013597	+	25.6	1509	Intergenic	Intergenic	-64619	NM_015082	23105	Hs.483390	NM_015082	ENSG00000053108	FSTL4	-	follistatin like 4	protein-coding	25.6	5.34	4.794007491	2.00E-08
chr5-313	chr5	133246713	133247713	+	19.2	1000	Intergenic	Intergenic	-2155	NR_131252	105664404	Hs.582536	NR_131252	ENSG00000249073	WSPAR	LncTCF7|TCONS_00009511	WNT signaling pathway activating non-coding RNA	ncRNA	19.2	2.43	7.901234568	1.91E-09
chr5-319	chr5	139379727	139381922	+	41	2195	"intron (NM_013983, intron 1 of 10)"	L2c|LINE|L2	42060	NM_004883	9542	Hs.408515	NM_004883	ENSG00000158458	NRG2	DON1|HRG2|NTAK	neuregulin 2	protein-coding	40.97	7.77	5.272844273	1.22E-13
chr5-32	chr5	159412961	159414230	+	26.2	1269	Intergenic	MER5A|DNA|hAT-Charlie	-22512	NM_001282500	7265	Hs.519718	NM_003314	ENSG00000113312	TTC1	TPR1	tetratricopeptide repeat domain 1	protein-coding	26.24	1.94	13.5257732	4.03E-16
chr5-321	chr5	139463430	139465195	+	28.2	1765	Intergenic	Intergenic	23285	NR_102741	100505636	Hs.438871	NR_102739	ENSG00000245146	LINC01024	MA-linc1	long intergenic non-protein coding RNA 1024	ncRNA	28.16	6.31	4.462757528	1.42E-08
chr5-322	chr5	139524827	139526341	+	30.7	1514	Intergenic	CpG	-11320	NR_130738	101929719	Hs.150064	NR_130738	ENSG00000254363	LOC101929719	-	uncharacterized LOC101929719	ncRNA	30.72	3.4	9.035294118	1.89E-15
chr5-328	chr5	148711897	148713244	+	22.4	1347	"intron (NM_001146337, intron 17 of 17)"	MIRb|SINE|MIR	-12407	NM_152407	134266	Hs.511816	NM_152407	ENSG00000164284	GRPEL2	Mt-GrpE#2	"GrpE like 2, mitochondrial"	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr5-329	chr5	148960248	148961501	+	24.3	1253	promoter-TSS (NM_001001669)	promoter-TSS (NM_001001669)	-261	NM_001001669	389337	Hs.256206	NM_001001669	ENSG00000183111	ARHGEF37	-	Rho guanine nucleotide exchange factor 37	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr5-338	chr5	157002015	157004484	+	39.7	2469	promoter-TSS (NM_033274)	promoter-TSS (NM_033274)	-418	NM_033274	8728	Hs.483944	NM_023038	ENSG00000135074	ADAM19	FKSG34|MADDAM|MLTNB	ADAM metallopeptidase domain 19	protein-coding	39.69	4.85	8.183505155	2.73E-18
chr5-339	chr5	157389301	157390809	+	28.8	1508	Intergenic	AluSx1|SINE|Alu	-103872	NM_001195556	9685	Hs.644000	NM_014666	ENSG00000113282	CLINT1	CLINT|ENTH|EPN4|EPNR	clathrin interactor 1	protein-coding	28.8	3.88	7.422680412	1.97E-12
chr5-340	chr5	158506272	158507527	+	22.4	1255	"intron (NM_001324101, intron 5 of 16)"	AluSz|SINE|Alu	19871	NM_001324101	1879	Hs.573143	NM_024007	ENSG00000164330	EBF1	COE1|EBF|O/E-1|OLF1	early B-cell factor 1	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr5-342	chr5	169796709	169797963	+	23.7	1254	"intron (NM_001034838, intron 1 of 7)"	MIRb|SINE|MIR	16845	NM_001034838	30820	Hs.484111	NM_014592	ENSG00000182132	KCNIP1	KCHIP1|VABP	potassium voltage-gated channel interacting protein 1	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr5-344	chr5	170090922	170092260	+	21.8	1338	"intron (NR_136214, intron 4 of 5)"	AluSx|SINE|Alu	16883	NR_136214	105377716	Hs.570880	NR_136214	ENSG00000253591	LOC105377716	-	uncharacterized LOC105377716	ncRNA	21.76	3.88	5.608247423	2.53E-08
chr5-348	chr5	172652837	172656760	+	64.6	3923	Intergenic	Intergenic	7517	NM_001166175	1482	Hs.54473	NM_004387	ENSG00000183072	NKX2-5	CHNG5|CSX|CSX1|HLHS2|NKX2.5|NKX2E|NKX4-1|VSD3	NK2 homeobox 5	protein-coding	64.65	16.02	4.035580524	1.18E-15
chr5-353	chr5	103849	105178	+	21.1	1329	Intergenic	L1MEc|LINE|L1	-35860	NM_052909	153478	Hs.535800	NM_052909	ENSG00000153404	PLEKHG4B	-	pleckstrin homology and RhoGEF domain containing G4B	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr5-355	chr5	1862360	1864268	+	33.9	1908	Intergenic	ERVL-B4-int|LTR|ERVL	-6632	NR_104602	101929034	Hs.128032	NR_104602	ENSG00000250417	LINC02116	-	long intergenic non-protein coding RNA 2116	ncRNA	33.92	5.82	5.828178694	4.04E-12
chr5-356	chr5	2037118	2038118	+	18.6	1000	Intergenic	Intergenic	150173	NR_109912	101929081	Hs.519180	NR_109912	ENSG00000249326	CTD-2194D22.4	-	uncharacterized LOC101929081	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr5-358	chr5	6433997	6434997	+	19.2	1000	Intergenic	Intergenic	-14239	NM_001145161	134111	Hs.126856	NM_001145161	ENSG00000215218	UBE2QL1	-	ubiquitin conjugating enzyme E2 Q family like 1	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr5-360	chr5	31755303	31756566	+	21.1	1263	"intron (NM_178140, intron 1 of 24)"	"intron (NM_178140, intron 1 of 24)"	116417	NM_178140	23037	Hs.481819	NM_015022	ENSG00000133401	PDZD2	AIPC|PAPIN|PDZK3|PIN1	PDZ domain containing 2	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr5-363	chr5	39423379	39426919	+	61.4	3540	"5' UTR (NM_001244871, exon 1 of 14)"	"5' UTR (NM_001244871, exon 1 of 14)"	186	NM_001343	1601	Hs.696631	NM_001343	ENSG00000153071	DAB2	DOC-2|DOC2	"DAB2, clathrin adaptor protein"	protein-coding	61.45	11.16	5.506272401	2.24E-20
chr5-367	chr5	54196074	54198282	+	42.2	2208	Intergenic	Intergenic	84236	NM_007036	11082	Hs.129944	NM_007036	ENSG00000164283	ESM1	endocan	endothelial cell specific molecule 1	protein-coding	42.25	4.85	8.711340206	3.69E-20
chr5-368	chr5	54451799	54452799	+	18.6	1000	"intron (NM_152623, intron 2 of 11)"	MIRb|SINE|MIR	-3647	NM_001008397	493869	Hs.289044	NM_001008397	ENSG00000164294	GPX8	EPLA847|GPx-8|GSHPx-8|UNQ847	glutathione peroxidase 8 (putative)	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr5-377	chr5	66243790	66244790	+	19.2	1000	"intron (NM_015183, intron 3 of 27)"	"intron (NM_015183, intron 3 of 27)"	-10408	NM_001290226	375449	Hs.595458	NM_015183	ENSG00000069020	MAST4	-	microtubule associated serine/threonine kinase family member 4	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr5-385	chr5	72743968	72749583	+	81.3	5615	Intergenic	Intergenic	-2423	NM_004472	2297	Hs.519385	NM_004472	ENSG00000251493	FOXD1	FKHL8|FREAC-4|FREAC4	forkhead box D1	protein-coding	81.29	17.47	4.653119634	2.46E-22
chr5-387	chr5	75574334	75575334	+	18.6	1000	"intron (NM_001297716, intron 4 of 12)"	L2a|LINE|L2	-124246	NM_006633	10788	Hs.291030	NM_006633	ENSG00000145703	IQGAP2	-	IQ motif containing GTPase activating protein 2	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr5-392	chr5	112590781	112591781	+	18.6	1000	"intron (NM_001085377, intron 3 of 18)"	MLT1K|LTR|ERVL-MaLR	39331	NM_002387	4163	Hs.593171	NM_002387	ENSG00000171444	MCC	MCC1	mutated in colorectal cancers	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr5-393	chr5	115151687	115152970	+	21.8	1283	promoter-TSS (NM_001323567)	promoter-TSS (NM_001323567)	26	NM_001323567	1036	Hs.442378	NM_001801	ENSG00000129596	CDO1	CDO-I	cysteine dioxygenase type 1	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr5-395	chr5	122370935	122372257	+	20.5	1322	"intron (NM_000943, intron 1 of 4)"	CpG	829	NM_000943	5480	Hs.110364	NM_000943	ENSG00000168938	PPIC	CYPC	peptidylprolyl isomerase C	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr5-396	chr5	131622247	131623247	+	17.9	1000	Intergenic	LTR57-int|LTR|ERVL	-7398	NM_003059	6583	Hs.310591	NM_003059	ENSG00000197208	SLC22A4	DFNB60|OCTN1	solute carrier family 22 member 4	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr5-398	chr5	132147444	132148870	+	26.2	1426	promoter-TSS (NM_175873)	promoter-TSS (NM_175873)	-859	NM_175873	134548	Hs.13308	NM_175873	ENSG00000198944	SOWAHA	ANKRD43	sosondowah ankyrin repeat domain family member A	protein-coding	26.24	4.85	5.410309278	4.26E-09
chr5-400	chr5	132453898	132455173	+	23	1275	Intergenic	Intergenic	66873	NM_002154	3308	Hs.90093	NM_002154	ENSG00000170606	HSPA4	APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY	heat shock protein family A (Hsp70) member 4	protein-coding	23.04	1.46	15.78082192	5.41E-16
chr5-401	chr5	132635721	132636721	+	19.2	1000	"intron (NM_015082, intron 6 of 15)"	"intron (NM_015082, intron 6 of 15)"	127177	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA	19.2	1.46	13.15068493	1.82E-12
chr5-402	chr5	132772163	132773163	+	17.9	1000	"intron (NM_015082, intron 3 of 15)"	L2c|LINE|L2	-9265	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr5-406	chr5	133027989	133028989	+	18.6	1000	Intergenic	L2b|LINE|L2	-80266	NM_015082	23105	Hs.483390	NM_015082	ENSG00000053108	FSTL4	-	follistatin like 4	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr5-411	chr5	135046445	135048366	+	32.6	1921	Intergenic	Intergenic	-57781	NR_027127	340074	Hs.434633	NR_027127	ENSG00000251045	LINC01959	-	long intergenic non-protein coding RNA 1959	ncRNA	32.64	5.82	5.608247423	2.32E-11
chr5-42	chr5	145720787	145725989	+	73	5202	Intergenic	Intergenic	4801	NM_002700	5459	Hs.553499	NM_002700	ENSG00000091010	POU4F3	BRN3C|DFNA15|DFNA42|DFNA52	POU class 4 homeobox 3	protein-coding	72.97	16.5	4.422424242	1.55E-19
chr5-421	chr5	139396060	139397060	+	18.6	1000	"intron (NM_013983, intron 1 of 10)"	L2c|LINE|L2	26324	NM_004883	9542	Hs.408515	NM_004883	ENSG00000158458	NRG2	DON1|HRG2|NTAK	neuregulin 2	protein-coding	18.56	0	19.11898173	9.96E-18
chr5-423	chr5	141933764	141934764	+	18.6	1000	Intergenic	MLT1B|LTR|ERVL-MaLR	59462	NM_033137	2246	Hs.483635	NM_000800	ENSG00000113578	FGF1	AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1	fibroblast growth factor 1	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr5-425	chr5	143584640	143587096	+	36.5	2456	"intron (NM_020768, intron 2 of 3)"	CT-rich|Low_complexity|Low_complexity	35431	NM_020768	57528	Hs.7093	NM_020768	ENSG00000183775	KCTD16	-	potassium channel tetramerization domain containing 16	protein-coding	36.48	7.77	4.694980695	8.02E-11
chr5-427	chr5	146767489	146768489	+	18.6	1000	TTS (NM_001287740)	TTS (NM_001287740)	65271	NM_001387	1809	Hs.519659	NM_001387	ENSG00000113657	DPYSL3	CRMP-4|CRMP4|DRP-3|DRP3|LCRMP|ULIP|ULIP-1	dihydropyrimidinase like 3	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr5-433	chr5	150004550	150007019	+	42.9	2469	"intron (NM_001166209, intron 2 of 2)"	"intron (NM_001166209, intron 2 of 2)"	8578	NM_001166209	11346	Hs.435228	NM_007286	ENSG00000171992	SYNPO	-	synaptopodin	protein-coding	42.89	6.31	6.797147385	7.07E-17
chr5-436	chr5	153854593	153857496	+	51.2	2903	"intron (NM_004821, intron 1 of 1)"	CpG	1780	NM_004821	9421	Hs.152531	NM_004821	ENSG00000113196	HAND1	Hxt|Thing1|bHLHa27|eHand	heart and neural crest derivatives expressed 1	protein-coding	51.21	5.82	8.798969072	3.04E-24
chr5-440	chr5	154525658	154526658	+	19.2	1000	Intergenic	Intergenic	132843	NM_001099293	285643	Hs.567824	NM_001099293	ENSG00000226650	KIF4B	-	kinesin family member 4B	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr5-443	chr5	159056244	159057244	+	19.2	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	-163460	NR_027110	285627	Hs.552766	NR_027110	ENSG00000253298	LINC01845	-	long intergenic non-protein coding RNA 1845	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr5-446	chr5	168485611	168486957	+	22.4	1346	"intron (NM_003062, intron 4 of 35)"	"intron (NM_003062, intron 4 of 35)"	46052	NR_109897	728095	Hs.145601	NR_109897		LOC728095	-	uncharacterized LOC728095	ncRNA	22.4	2.43	9.218106996	2.49E-11
chr5-447	chr5	168792103	168793677	+	27.5	1574	Intergenic	L2a|LINE|L2	-64757	NM_003062	6586	Hs.552087	NM_003062	ENSG00000184347	SLIT3	MEGF5|SLIL2|SLIT1|Slit-3|slit2	slit guidance ligand 3	protein-coding	27.52	3.4	8.094117647	1.25E-12
chr5-456	chr5	175224468	175225468	+	19.8	1000	"intron (NM_006650, intron 1 of 4)"	MIR3|SINE|MIR	1358	NM_006650	10814	Hs.193235	NM_006650	ENSG00000145920	CPLX2	921-L|CPX-2|CPX2|Hfb1	complexin 2	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr5-457	chr5	701720	702720	+	17.9	1000	Intergenic	L1MEd|LINE|L1	-8710	NM_007030	11076	Hs.481466	NM_007030	ENSG00000171368	TPPP	TPPP/p25|TPPP1|p24|p25|p25alpha	tubulin polymerization promoting protein	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr5-458	chr5	1655249	1657728	+	37.1	2479	Intergenic	Intergenic	-22368	NR_003713	728613	Hs.720393	NR_003713		LOC728613	-	programmed cell death 6 pseudogene	pseudo	37.12	3.88	9.567010309	5.72E-19
chr5-462	chr5	1874364	1877788	+	59.5	3424	Intergenic	CpG	6804	NM_016358	50805	Hs.196927	NM_016358	ENSG00000113430	IRX4	IRXA3	iroquois homeobox 4	protein-coding	59.53	9.71	6.130792997	3.28E-21
chr5-463	chr5	1896509	1897509	+	17.9	1000	"intron (NR_109912, intron 2 of 3)"	"intron (NR_109912, intron 2 of 3)"	9564	NR_109912	101929081	Hs.519180	NR_109912	ENSG00000249326	CTD-2194D22.4	-	uncharacterized LOC101929081	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr5-464	chr5	2032722	2035386	+	42.9	2664	Intergenic	MLT1F-int|LTR|ERVL-MaLR	146609	NR_109912	101929081	Hs.519180	NR_109912	ENSG00000249326	CTD-2194D22.4	-	uncharacterized LOC101929081	ncRNA	42.89	10.68	4.015917603	9.13E-11
chr5-467	chr5	3967265	3968265	+	17.3	1000	Intergenic	THE1C|LTR|ERVL-MaLR	371597	NM_024337	79192	Hs.424156	NM_024337	ENSG00000170549	IRX1	IRX-5|IRXA1	iroquois homeobox 1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr5-470	chr5	11153838	11154838	+	18.6	1000	"intron (NR_109988, intron 10 of 21)"	"intron (NR_109988, intron 10 of 21)"	-392951	NM_001291963	1611	Hs.75189	NM_004394	ENSG00000112977	DAP	-	death associated protein	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr5-478	chr5	52780703	52781703	+	17.9	1000	"intron (NM_013409, intron 5 of 5)"	"intron (NM_013409, intron 5 of 5)"	4939	NM_013409	10468	Hs.9914	NM_006350	ENSG00000134363	FST	FS	follistatin	protein-coding	17.92	1.46	12.2739726	2.41E-11
chr5-485	chr5	60920596	60922917	+	39	2321	Intergenic	CpG	-11852	NR_126525	285668	Hs.683866	NM_173667	ENSG00000178722	C5orf64	-	chromosome 5 open reading frame 64	protein-coding	39.04	6.8	5.741176471	1.26E-13
chr5-486	chr5	61023189	61024189	+	17.9	1000	"intron (NR_126524, intron 3 of 3)"	"intron (NR_126524, intron 3 of 3)"	7836	NR_105000	100506526	Hs.662277	NR_105000		C5orf64-AS1	-	C5orf64 antisense RNA 1	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr5-487	chr5	66123716	66124972	+	20.5	1256	promoter-TSS (NM_015183)	promoter-TSS (NM_015183)	-260	NM_015183	375449	Hs.595458	NM_015183	ENSG00000069020	MAST4	-	microtubule associated serine/threonine kinase family member 4	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr5-491	chr5	72462508	72464402	+	32	1894	Intergenic	Intergenic	-5568	NM_153217	134288	Hs.508588	NM_153217	ENSG00000164325	TMEM174	-	transmembrane protein 174	protein-coding	32	6.8	4.705882353	5.32E-10
chr5-492	chr5	72527669	72529214	+	30.7	1545	Intergenic	Intergenic	-30653	NR_134291	340090	Hs.434311	NR_134291		LOC340090	-	uncharacterized LOC340090	ncRNA	30.72	4.85	6.334020619	3.34E-12
chr5-498	chr5	77812997	77813997	+	18.6	1000	"intron (NM_005779, intron 3 of 4)"	THE1B|LTR|ERVL-MaLR	131151	NM_005779	10184	Hs.79299	NM_005779	ENSG00000145685	LHFPL2	-	lipoma HMGIC fusion partner-like 2	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr5-500	chr5	112629364	112630364	+	16.6	1000	"intron (NM_001085377, intron 3 of 18)"	"intron (NM_001085377, intron 3 of 18)"	748	NM_002387	4163	Hs.593171	NM_002387	ENSG00000171444	MCC	MCC1	mutated in colorectal cancers	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr5-510	chr5	134520478	134521478	+	17.9	1000	"intron (NM_001277348, intron 3 of 5)"	"intron (NM_001277348, intron 3 of 5)"	62889	NR_037895	340073	Hs.434422	NR_037895	ENSG00000249647	C5orf66-AS2	-	C5orf66 antisense RNA 2	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr5-516	chr5	135358838	135359838	+	17.3	1000	Intergenic	Intergenic	-5246	NM_000358	7045	Hs.369397	NM_000358	ENSG00000120708	TGFBI	BIGH3|CDB1|CDG2|CDGG1|CSD|CSD1|CSD2|CSD3|EBMD|LCD1	transforming growth factor beta induced	protein-coding	17.28	0.49	35.26530612	3.68E-16
chr5-517	chr5	137983683	137986857	+	48	3174	Intergenic	Intergenic	-73952	NM_004134	3313	Hs.184233	NM_004134	ENSG00000113013	HSPA9	CRP40|CSA|EVPLS|GRP-75|GRP75|HEL-S-124m|HSPA9B|MOT|MOT2|MTHSP75|PBP74|SAAN|SIDBA4	heat shock protein family A (Hsp70) member 9	protein-coding	48.01	5.82	8.249140893	1.93E-21
chr5-524	chr5	140381474	140382731	+	21.1	1257	"intron (NM_031860, intron 3 of 3)"	"intron (NM_031860, intron 3 of 3)"	35750	NM_031883	56134	Hs.199343	NM_018899	ENSG00000243232	PCDHAC2	PCDH-ALPHA-C2	"protocadherin alpha subfamily C, 2"	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr5-526	chr5	140556024	140558911	+	42.9	2887	promoter-TSS (NM_019120)	promoter-TSS (NM_019120)	96	NM_019120	56128	Hs.283803	NM_019120	ENSG00000120322	PCDHB8	PCDH-BETA8|PCDH3I	protocadherin beta 8	protein-coding	42.89	6.8	6.307352941	5.66E-16
chr5-532	chr5	149101948	149102948	+	18.6	1000	Intergenic	L1ME3C|LINE|L1	-7367	NM_001172698	133522	Hs.483816	NM_133263	ENSG00000155846	PPARGC1B	ERRL1|PERC|PGC-1(beta)|PGC1B	PPARG coactivator 1 beta	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr5-538	chr5	151278097	151279097	+	17.9	1000	"intron (NM_001146040, intron 1 of 8)"	L2c|LINE|L2	25800	NM_001292000	2741	Hs.121490	NM_000171	ENSG00000145888	GLRA1	HKPX1|STHE	glycine receptor alpha 1	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr5-539	chr5	153892727	153895084	+	33.3	2357	Intergenic	MIR|SINE|MIR	-36081	NM_004821	9421	Hs.152531	NM_004821	ENSG00000113196	HAND1	Hxt|Thing1|bHLHa27|eHand	heart and neural crest derivatives expressed 1	protein-coding	33.28	7.77	4.283140283	1.68E-09
chr5-540	chr5	153988246	153992617	+	64	4371	Intergenic	CpG	-14799	NR_036094	100422950		NR_036094	ENSG00000264760	MIR3141	mir-3141	microRNA 3141	ncRNA	64.01	12.62	5.072107765	1.04E-19
chr5-542	chr5	157136278	157137278	+	18.6	1000	Intergenic	MLT1L|LTR|ERVL-MaLR	-21619	NM_001317824	54974	Hs.353090	NM_017872	ENSG00000113272	THG1L	ICF45|IHG-1|hTHG1	tRNA-histidine guanylyltransferase 1 like	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr5-544	chr5	158735843	158736843	+	16.6	1000	Intergenic	MIR3|SINE|MIR	21138	NM_002187	3593	Hs.674	NM_002187	ENSG00000113302	IL12B	CLMF|CLMF2|IL-12B|IMD28|IMD29|NKSF|NKSF2	interleukin 12B	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr5-547	chr5	169580015	169584002	+	52.5	3987	Intergenic	Intergenic	44137	NR_108022	100507267	Hs.634846	NR_108022		LINC01187	CTB-27N1.1|KIDR	long intergenic non-protein coding RNA 1187	ncRNA	52.49	12.13	4.327287716	3.28E-14
chr5-551	chr5	170108881	170109881	+	18.6	1000	promoter-TSS (NR_136214)	promoter-TSS (NR_136214)	-907	NR_136214	105377716	Hs.570880	NR_136214	ENSG00000253591	LOC105377716	-	uncharacterized LOC105377716	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr5-552	chr5	170897255	170898255	+	18.6	1000	Intergenic	AluJb|SINE|Alu	51088	NM_003862	8817	Hs.87191	NM_003862	ENSG00000156427	FGF18	FGF-18|ZFGF5	fibroblast growth factor 18	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr5-553	chr5	171190187	171192238	+	33.9	2051	Intergenic	Intergenic	-21664	NM_001289970	644994	Hs.591740	NM_001289970		SMIM23	C5orf50	small integral membrane protein 23	protein-coding	33.92	3.4	9.976470588	2.03E-17
chr5-555	chr5	171916277	171917527	+	20.5	1250	Intergenic	Intergenic	-35375	NM_001017995	285590	Hs.285666	NM_001017995	ENSG00000174705	SH3PXD2B	FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4	SH3 and PX domains 2B	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr5-558	chr5	172669184	172674046	+	80	4862	Intergenic	CpG	-9300	NM_004387	1482	Hs.54473	NM_004387	ENSG00000183072	NKX2-5	CHNG5|CSX|CSX1|HLHS2|NKX2.5|NKX2E|NKX4-1|VSD3	NK2 homeobox 5	protein-coding	80.01	9.22	8.677874187	3.94E-36
chr5-560	chr5	1145420	1146679	+	19.8	1259	Intergenic	L1MB3|LINE|L1	32671	NR_109911	101928857	Hs.593732	NR_109911	ENSG00000249201	CTD-3080P12.3	-	uncharacterized LOC101928857	ncRNA	19.84	1.94	10.22680412	9.57E-11
chr5-566	chr5	2105678	2106940	+	19.8	1262	Intergenic	L1MEg|LINE|L1	206006	NR_104616	100506858	Hs.445071	NR_104616		LOC100506858	-	uncharacterized LOC100506858	ncRNA	19.84	3.88	5.113402062	7.67E-07
chr5-567	chr5	2128673	2129673	+	17.3	1000	Intergenic	Intergenic	183142	NR_104616	100506858	Hs.445071	NR_104616		LOC100506858	-	uncharacterized LOC100506858	ncRNA	17.28	1.46	11.83561644	2.99E-10
chr5-575	chr5	10964785	10965785	+	17.3	1000	Intergenic	MLT1G1|LTR|ERVL-MaLR	-203898	NM_001291963	1611	Hs.75189	NM_004394	ENSG00000112977	DAP	-	death associated protein	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr5-578	chr5	31639034	31643074	+	60.2	4040	"intron (NM_178140, intron 1 of 24)"	"intron (NM_178140, intron 1 of 24)"	1537	NM_178140	23037	Hs.481819	NM_015022	ENSG00000133401	PDZD2	AIPC|PAPIN|PDZK3|PIN1	PDZ domain containing 2	protein-coding	60.17	13.11	4.58962624	5.29E-17
chr5-579	chr5	31989951	31991203	+	19.8	1252	"intron (NM_178140, intron 3 of 24)"	"intron (NM_178140, intron 3 of 24)"	-54312	NR_036241	100422874		NR_036241	ENSG00000266243	MIR4279	-	microRNA 4279	ncRNA	19.84	4.85	4.090721649	1.08E-05
chr5-581	chr5	35659987	35660987	+	17.3	1000	"intron (NM_024867, intron 8 of 36)"	"intron (NM_024867, intron 8 of 36)"	42498	NM_024867	79925	Hs.298863	NM_024867	ENSG00000152582	SPEF2	CT122|KPL2	sperm flagellar 2	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr5-594	chr5	65913987	65914987	+	17.3	1000	"intron (NM_198828, intron 1 of 5)"	"intron (NM_198828, intron 1 of 5)"	22311	NM_198828	375449	Hs.595458	NM_015183	ENSG00000069020	MAST4	-	microtubule associated serine/threonine kinase family member 4	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr5-595	chr5	67424796	67425796	+	17.3	1000	Intergenic	Intergenic	-60408	NR_105003	102467655	Hs.544102	NR_105003	ENSG00000253787	LOC102467655	-	uncharacterized LOC102467655	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr5-599	chr5	71806070	71807333	+	21.1	1263	Intergenic	Intergenic	-3452	NM_152625	167465	Hs.224794	NM_152625	ENSG00000178175	ZNF366	DCSCRIPT	zinc finger protein 366	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr5-600	chr5	72016804	72017804	+	16.6	1000	Intergenic	Intergenic	-60808	NR_105007	102477328	Hs.254516	NR_105007	ENSG00000248371	LINC02056	-	long intergenic non-protein coding RNA 2056	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr5-601	chr5	72049894	72050894	+	17.9	1000	Intergenic	LTR16D|LTR|ERVL	-62024	NM_002270	3842	Hs.482497	NM_002270	ENSG00000083312	TNPO1	IPO2|KPNB2|MIP|MIP1|TRN	transportin 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr5-606	chr5	73267337	73268337	+	17.3	1000	Intergenic	Intergenic	158494	NM_001244364	64283	Hs.482521	NM_001080479	ENSG00000214944	ARHGEF28	RGNEF|RIP2|p190RHOGEF	Rho guanine nucleotide exchange factor 28	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr5-609	chr5	76508258	76509258	+	17.3	1000	"intron (NM_001029853, intron 1 of 20)"	"intron (NM_001029853, intron 1 of 20)"	2052	NM_001029852	8622	Hs.584830	NM_003719	ENSG00000113231	PDE8B	ADSD|PPNAD3	phosphodiesterase 8B	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr5-610	chr5	82767057	82768381	+	23.7	1324	"5' UTR (NM_004385, exon 1 of 15)"	"5' UTR (NM_004385, exon 1 of 15)"	226	NM_001164097	1462	Hs.643801	NM_004385	ENSG00000038427	VCAN	CSPG2|ERVR|GHAP|PG-M|WGN|WGN1	versican	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr5-611	chr5	90966383	90967383	+	17.9	1000	Intergenic	Intergenic	-287693	NR_138072	57561	Hs.24684	NM_020801	ENSG00000113369	ARRDC3	TLIMP	arrestin domain containing 3	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr5-612	chr5	92929576	92931782	+	37.8	2206	TTS (NM_005654)	TTS (NM_005654)	11636	NM_005654	7025	Hs.519445	NM_005654	ENSG00000175745	NR2F1	BBOAS|BBSOAS|COUP-TFI|EAR-3|EAR3|ERBAL3|NR2F2|SVP44|TCFCOUP1|TFCOUP1	nuclear receptor subfamily 2 group F member 1	protein-coding	37.76	6.8	5.552941176	7.17E-13
chr5-614	chr5	92937619	92942359	+	64.6	4740	Intergenic	CpG	16505	NR_031754	100313887		NR_031754	ENSG00000113391	MIR2277	mir-2277	microRNA 2277	ncRNA	64.65	13.59	4.757174393	2.02E-18
chr5-617	chr5	111909215	111910215	+	17.3	1000	Intergenic	Intergenic	-54418	NR_104672	102467214	Hs.124613	NR_104672		LOC102467214	-	uncharacterized LOC102467214	ncRNA	17.28	0.97	17.81443299	2.06E-12
chr5-620	chr5	126541874	126543416	+	23.7	1542	Intergenic	Intergenic	-83811	NM_001256545	84466	Hs.438709	NM_032446	ENSG00000145794	MEGF10	EMARDD	multiple EGF like domains 10	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr5-622	chr5	132117266	132118266	+	16.6	1000	Intergenic	HAL1b|LINE|L1	-4205	NM_001098813	23176	Hs.522057	NM_015146	ENSG00000164402	8-Sep	2-Sep	septin 8	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr5-627	chr5	132821031	132822031	+	17.3	1000	"intron (NM_015082, intron 3 of 15)"	"intron (NM_015082, intron 3 of 15)"	-58133	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr5-628	chr5	132823774	132824774	+	16.6	1000	"intron (NM_015082, intron 3 of 15)"	"intron (NM_015082, intron 3 of 15)"	-60876	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr5-630	chr5	133016611	133017611	+	17.3	1000	Intergenic	Intergenic	-68888	NM_015082	23105	Hs.483390	NM_015082	ENSG00000053108	FSTL4	-	follistatin like 4	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr5-634	chr5	134785470	134786470	+	16.6	1000	"intron (NM_001099221, intron 1 of 1)"	"intron (NM_001099221, intron 1 of 1)"	2119	NM_001099221	497189	Hs.552091	NM_001099221	ENSG00000255833	TIFAB	-	TIFA inhibitor	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr5-635	chr5	134973065	134974441	+	21.1	1376	Intergenic	Kanga1c|DNA|TcMar-Tc2	15871	NR_027127	340074	Hs.434633	NR_027127	ENSG00000251045	LINC01959	-	long intergenic non-protein coding RNA 1959	ncRNA	21.12	1.94	10.88659794	9.02E-12
chr5-636	chr5	135229621	135230621	+	17.9	1000	"intron (NM_000590, intron 3 of 4)"	"intron (NM_000590, intron 3 of 4)"	1395	NM_000590	3578	Hs.960	NM_000590	ENSG00000145839	IL9	HP40|IL-9|P40	interleukin 9	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr5-644	chr5	138898443	138899443	+	16.6	1000	Intergenic	AluSc|SINE|Alu	-36568	NM_198282	340061	Hs.379754	NM_198282	ENSG00000184584	TMEM173	ERIS|MITA|MPYS|NET23|SAVI|STING|hMITA|hSTING	transmembrane protein 173	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr5-648	chr5	139230352	139231352	+	16.6	1000	"intron (NM_013983, intron 10 of 10)"	AluSx|SINE|Alu	55446	NM_032289	84249	Hs.21963	NM_032289	ENSG00000146005	PSD2	EFA6C	pleckstrin and Sec7 domain containing 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr5-653	chr5	140505498	140506498	+	17.9	1000	TTS (NM_018938)	TTS (NM_018938)	4666	NM_018938	56131	Hs.591250	NM_018938	ENSG00000081818	PCDHB4	PCDH-BETA4	protocadherin beta 4	protein-coding	17.92	0	18.4597065	9.96E-18
chr5-654	chr5	141137302	141142340	+	74.9	5038	Intergenic	Intergenic	-78021	NM_022481	64411	Hs.726187	NM_022481	ENSG00000120318	ARAP3	CENTD3|DRAG1	"ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3"	protein-coding	74.89	11.65	6.42832618	2.36E-27
chr5-655	chr5	141239100	141240100	+	17.9	1000	"intron (NM_032420, intron 3 of 4)"	"intron (NM_032420, intron 3 of 4)"	6167	NM_001278615	5097	Hs.79769	NM_002587	ENSG00000156453	PCDH1	PC42|PCDH42	protocadherin 1	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr5-657	chr5	141585968	141586968	+	17.3	1000	Intergenic	ERV3-16A3_I-int|LTR|ERVL	98144	NM_030571	80762	Hs.9788	NM_030571	ENSG00000131507	NDFIP1	N4WBP5	Nedd4 family interacting protein 1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr5-658	chr5	141979295	141980295	+	16.6	1000	"intron (NM_033136, intron 2 of 2)"	AluJo|SINE|Alu	13931	NM_033137	2246	Hs.483635	NM_000800	ENSG00000113578	FGF1	AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1	fibroblast growth factor 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr5-659	chr5	142032028	142033028	+	17.3	1000	"intron (NM_001144935, intron 1 of 3)"	"intron (NM_001144935, intron 1 of 3)"	-8662	NM_001257210	2246	Hs.483635	NM_000800	ENSG00000113578	FGF1	AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1	fibroblast growth factor 1	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr5-662	chr5	145194069	145195069	+	17.3	1000	"intron (NM_205846, intron 4 of 6)"	"intron (NM_205846, intron 4 of 6)"	20363	NM_138492	153768	Hs.314261	NM_138492	ENSG00000186314	PRELID2	-	PRELI domain containing 2	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr5-668	chr5	147677671	147678671	+	16.6	1000	"intron (NR_105057, intron 3 of 4)"	"intron (NR_105057, intron 3 of 4)"	-13819	NM_032566	84651	Hs.244569	NM_032566	ENSG00000145879	SPINK7	ECG2|ECRG2	"serine peptidase inhibitor, Kazal type 7 (putative)"	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr5-671	chr5	149591314	149592617	+	19.8	1303	Intergenic	Intergenic	22541	NM_014228	6534	Hs.241597	NM_014228	ENSG00000011083	SLC6A7	PROT	solute carrier family 6 member 7	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr5-673	chr5	149650018	149651018	+	17.9	1000	"intron (NM_171825, intron 2 of 17)"	"intron (NM_171825, intron 2 of 17)"	18885	NM_015981	815	Hs.743976	NM_015981	ENSG00000070808	CAMK2A	CAMKA	calcium/calmodulin dependent protein kinase II alpha	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr5-674	chr5	149723263	149724537	+	20.5	1274	Intergenic	Intergenic	-13302	NM_001135244	6949	Hs.519672	NM_000356	ENSG00000070814	TCOF1	MFD1|TCS|TCS1|treacle	treacle ribosome biogenesis factor 1	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr5-678	chr5	151300197	151301452	+	20.5	1255	"intron (NM_001146040, intron 1 of 8)"	"intron (NM_001146040, intron 1 of 8)"	3573	NM_001292000	2741	Hs.121490	NM_000171	ENSG00000145888	GLRA1	HKPX1|STHE	glycine receptor alpha 1	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr5-679	chr5	152870708	152871960	+	19.8	1252	promoter-TSS (NM_001258021)	promoter-TSS (NM_001258021)	-398	NM_001258021	2890	Hs.519693	NM_000827	ENSG00000155511	GRIA1	GLUH1|GLUR1|GLURA|GluA1|HBGR1	glutamate ionotropic receptor AMPA type subunit 1	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr5-684	chr5	159309568	159310948	+	16.6	1380	Intergenic	Intergenic	-11867	NR_109891	101927766	Hs.638568	NR_109891	ENSG00000253311	LINC01847	-	long intergenic non-protein coding RNA 1847	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr5-686	chr5	168207399	168208399	+	17.9	1000	"intron (NM_003062, intron 12 of 35)"	"intron (NM_003062, intron 12 of 35)"	-12639	NR_029632	407001		NR_029632	ENSG00000207739	MIR218-2	MIRN218-2|mir-218-2	microRNA 218-2	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr5-687	chr5	168317812	168318812	+	17.3	1000	"intron (NM_003062, intron 4 of 35)"	"intron (NM_003062, intron 4 of 35)"	-121920	NR_109897	728095	Hs.145601	NR_109897		LOC728095	-	uncharacterized LOC728095	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr5-690	chr5	168870057	168871575	+	26.2	1518	Intergenic	Intergenic	-139822	NM_001329643	54908	Hs.368710	NM_017785	ENSG00000040275	SPDL1	CCDC99	spindle apparatus coiled-coil protein 1	protein-coding	26.24	4.85	5.410309278	4.26E-09
chr5-693	chr5	169825552	169826552	+	17.9	1000	"intron (NR_109899, intron 1 of 2)"	MER41D|LTR|ERV1	-9371	NM_004137	3779	Hs.484099	NM_004137	ENSG00000145936	KCNMB1	BKbeta1|K(VCA)beta|SLO-BETA|hbeta1|hslo-beta|k(VCA)beta-1|slo-beta-1	potassium calcium-activated channel subfamily M regulatory beta subunit 1	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr5-696	chr5	170146821	170147821	+	17.3	1000	"intron (NM_014592, intron 2 of 7)"	"intron (NM_014592, intron 2 of 7)"	-38847	NR_136214	105377716	Hs.570880	NR_136214	ENSG00000253591	LOC105377716	-	uncharacterized LOC105377716	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr5-698	chr5	170753407	170754407	+	16	1000	Intergenic	Intergenic	17619	NM_021025	30012	Hs.249125	NM_021025	ENSG00000164438	TLX3	HOX11L2|RNX	T-cell leukemia homeobox 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr5-699	chr5	171250205	171251459	+	20.5	1254	Intergenic	Intergenic	37956	NM_001289970	644994	Hs.591740	NM_001289970		SMIM23	C5orf50	small integral membrane protein 23	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr5-70	chr5	72251994	72253265	+	29.4	1271	"intron (NM_138782, intron 1 of 25)"	"intron (NM_138782, intron 1 of 25)"	821	NM_001146032	115548	Hs.165762	NM_138782	ENSG00000157107	FCHO2	-	FCH domain only 2	protein-coding	29.44	5.82	5.058419244	6.85E-10
chr5-700	chr5	171875423	171876686	+	20.5	1263	"intron (NM_001017995, intron 1 of 12)"	"intron (NM_001017995, intron 1 of 12)"	5473	NM_001308175	285590	Hs.285666	NM_001017995	ENSG00000174705	SH3PXD2B	FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4	SH3 and PX domains 2B	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr5-701	chr5	172102996	172103996	+	16	1000	"intron (NM_001308178, intron 2 of 3)"	MLT1K|LTR|ERVL-MaLR	14328	NR_049799	100847029		NR_049799	ENSG00000265160	MIR5003	-	microRNA 5003	ncRNA	16	0.49	32.65306122	1.26E-14
chr5-708	chr5	71041	80149	+	162.6	9108	Intergenic	(CGGGG)n|Simple_repeat|Simple_repeat	-64778	NM_052909	153478	Hs.535800	NM_052909	ENSG00000153404	PLEKHG4B	-	pleckstrin homology and RhoGEF domain containing G4B	protein-coding	162.58	26.7	6.089138577	1.20E-55
chr5-711	chr5	153242	154501	+	17.9	1259	"intron (NM_052909, intron 5 of 17)"	AluJb|SINE|Alu	13498	NM_052909	153478	Hs.535800	NM_052909	ENSG00000153404	PLEKHG4B	-	pleckstrin homology and RhoGEF domain containing G4B	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr5-714	chr5	1735571	1736880	+	20.5	1309	Intergenic	Intergenic	-27242	NR_036240	100422966		NR_036240	ENSG00000263746	MIR4277	-	microRNA 4277	ncRNA	20.48	0.49	41.79591837	5.97E-21
chr5-716	chr5	1754481	1755481	+	15.4	1000	Intergenic	MLT1A0|LTR|ERVL-MaLR	44975	NM_032479	64979	Hs.719465	NM_032479	ENSG00000171421	MRPL36	BRIP1|L36mt|MRP-L36|PRPL36|RPMJ	mitochondrial ribosomal protein L36	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr5-717	chr5	1761627	1762627	+	16	1000	Intergenic	AluSx|SINE|Alu	37829	NM_032479	64979	Hs.719465	NM_032479	ENSG00000171421	MRPL36	BRIP1|L36mt|MRP-L36|PRPL36|RPMJ	mitochondrial ribosomal protein L36	protein-coding	16	3.88	4.12371134	7.91E-05
chr5-722	chr5	2333474	2338593	+	71	5119	Intergenic	MLT1B|LTR|ERVL-MaLR	-23718	NR_104616	100506858	Hs.445071	NR_104616		LOC100506858	-	uncharacterized LOC100506858	ncRNA	71.05	7.77	9.144144144	2.36E-33
chr5-724	chr5	2663480	2664738	+	19.2	1258	Intergenic	Intergenic	87660	NM_001134222	153572	Hs.282089	NM_033267	ENSG00000170561	IRX2	IRXA2	iroquois homeobox 2	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr5-726	chr5	4816674	4817674	+	16.6	1000	Intergenic	Intergenic	43580	NR_104619	101929153	Hs.385526	NR_104619	ENSG00000249521	LINC02114	-	long intergenic non-protein coding RNA 2114	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr5-727	chr5	4947672	4948994	+	19.8	1322	Intergenic	Intergenic	-86139	NR_026994	340094	Hs.665092	NR_026994	ENSG00000215231	LINC01020	-	long intergenic non-protein coding RNA 1020	ncRNA	19.84	4.85	4.090721649	1.08E-05
chr5-729	chr5	6232613	6233879	+	17.3	1266	Intergenic	L2|LINE|L2	104159	NR_028351	401172	Hs.376760	NM_001001702	ENSG00000250490	LINC02145	-	long intergenic non-protein coding RNA 2145	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr5-73	chr5	106613832	106615126	+	25.6	1294	Intergenic	L1PA15|LINE|L1	-267764	NR_104671	102467213	Hs.570923	NR_104671	ENSG00000251027	LINC01950	-	long intergenic non-protein coding RNA 1950	ncRNA	25.6	5.34	4.794007491	2.00E-08
chr5-731	chr5	9875319	9876659	+	23.7	1340	"intron (NR_027112, intron 4 of 12)"	"intron (NR_027112, intron 4 of 12)"	27947	NR_027112	285692	Hs.651487	NR_027112	ENSG00000249781	LINC02112	-	long intergenic non-protein coding RNA 2112	ncRNA	23.68	4.85	4.882474227	1.15E-07
chr5-732	chr5	10656268	10657268	+	17.3	1000	"3' UTR (NM_001164440, exon 4 of 4)"	"3' UTR (NM_001164440, exon 4 of 4)"	92333	NM_001164440	651746	Hs.26039	NM_001164440	ENSG00000164236	ANKRD33B	-	ankyrin repeat domain 33B	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr5-735	chr5	16939946	16940946	+	16	1000	Intergenic	Intergenic	-4061	NM_012334	4651	Hs.481720	NM_012334	ENSG00000145555	MYO10	-	myosin X	protein-coding	16	3.88	4.12371134	7.91E-05
chr5-746	chr5	36441428	36442428	+	17.3	1000	Intergenic	Intergenic	-139917	NM_145000	202151	Hs.199777	NM_145000	ENSG00000164188	RANBP3L	-	RAN binding protein 3 like	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr5-747	chr5	37834645	37837675	+	51.2	3030	promoter-TSS (NM_001190469)	promoter-TSS (NM_001190469)	-231	NM_001190468	2668	Hs.248114	NM_000514	ENSG00000168621	GDNF	ATF|ATF1|ATF2|HFB1-GDNF|HSCR3	glial cell derived neurotrophic factor	protein-coding	51.21	3.88	13.19845361	1.20E-30
chr5-749	chr5	38257203	38260150	+	51.8	2947	"5' UTR (NM_001205301, exon 1 of 23)"	"5' UTR (NM_001205301, exon 1 of 23)"	165	NM_152403	133584	Hs.20103	NM_152403	ENSG00000164318	EGFLAM	AGRINL|AGRNL|PIKA	"EGF like, fibronectin type III and laminin G domains"	protein-coding	51.85	7.77	6.673101673	6.93E-20
chr5-75	chr5	134872919	134874696	+	34.6	1777	Intergenic	MLT1C|LTR|ERVL-MaLR	-2168	NM_006161	4762	Hs.248149	NM_006161	ENSG00000181965	NEUROG1	AKA|Math4C|NEUROD3|bHLHa6|ngn1	neurogenin 1	protein-coding	34.56	7.28	4.747252747	9.40E-11
chr5-751	chr5	38450170	38452921	+	49.3	2751	"exon (NM_182798, exon 14 of 17)"	"exon (NM_182798, exon 14 of 17)"	5967	NM_182801	133584	Hs.20103	NM_152403	ENSG00000164318	EGFLAM	AGRINL|AGRNL|PIKA	"EGF like, fibronectin type III and laminin G domains"	protein-coding	49.29	9.71	5.076210093	3.28E-15
chr5-752	chr5	38555352	38556352	+	17.3	1000	"intron (NM_002310, intron 1 of 19)"	"intron (NM_002310, intron 1 of 19)"	896	NM_001127671	3977	Hs.133421	NM_002310	ENSG00000113594	LIFR	CD118|LIF-R|SJS2|STWS|SWS	leukemia inhibitory factor receptor alpha	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr5-754	chr5	50683722	50684989	+	21.1	1267	"intron (NM_002202, intron 3 of 5)"	"intron (NM_002202, intron 3 of 5)"	-5189	NR_046243	642366	Hs.544139	NR_046243		LOC642366	-	uncharacterized LOC642366	ncRNA	21.12	3.88	5.443298969	1.44E-07
chr5-757	chr5	54481205	54482459	+	19.8	1254	Intergenic	AluY|SINE|Alu	-12827	NM_001170402	166979	Hs.669184	NM_152623	ENSG00000164287	CDC20B	G6VTS76519	cell division cycle 20B	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr5-758	chr5	54518894	54520427	+	21.8	1533	"intron (NM_001190787, intron 3 of 6)"	"intron (NM_001190787, intron 3 of 6)"	3483	NM_001190787	345643	Hs.394578	NM_001190787	ENSG00000234602	MCIDAS	IDAS|MCI|MCIN	multiciliate differentiation and DNA synthesis associated cell cycle protein	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr5-762	chr5	55348790	55350057	+	20.5	1267	Intergenic	LTR1D|LTR|ERV1	58428	NR_102755	441072	Hs.482141	NR_102755	ENSG00000227908	FLJ31104	-	uncharacterized LOC441072	ncRNA	20.48	4.37	4.686498856	6.64E-07
chr5-763	chr5	55653666	55655008	+	20.5	1342	Intergenic	Intergenic	123259	NR_104664	102467147	Hs.650177	NR_104664	ENSG00000248727	LINC01948	-	long intergenic non-protein coding RNA 1948	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr5-765	chr5	58635149	58636149	+	16.6	1000	"intron (NM_001165899, intron 3 of 16)"	"intron (NM_001165899, intron 3 of 16)"	17078	NM_001197219	5144	Hs.117545	NM_006203	ENSG00000113448	PDE4D	ACRDYS2|DPDE3|HSPDE4D|PDE43|PDE4DN2|STRK1	phosphodiesterase 4D	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr5-768	chr5	66030059	66031059	+	16.6	1000	"intron (NM_198828, intron 1 of 5)"	MER3|DNA|hAT-Charlie	-94045	NM_015183	375449	Hs.595458	NM_015183	ENSG00000069020	MAST4	-	microtubule associated serine/threonine kinase family member 4	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr5-776	chr5	72919389	72922428	+	47.4	3039	Intergenic	Intergenic	-1075	NM_001177693	64283	Hs.482521	NM_001080479	ENSG00000214944	ARHGEF28	RGNEF|RIP2|p190RHOGEF	Rho guanine nucleotide exchange factor 28	protein-coding	47.37	6.8	6.966176471	2.78E-19
chr5-778	chr5	73912086	73913551	+	21.8	1465	Intergenic	LTR18B|LTR|ERVL	-23030	NM_001292004	3074	Hs.69293	NM_000521	ENSG00000049860	HEXB	ENC-1AS|HEL-248|HEL-S-111	hexosaminidase subunit beta	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr5-786	chr5	77804915	77805915	+	16	1000	"intron (NM_005779, intron 4 of 4)"	"intron (NM_005779, intron 4 of 4)"	139233	NM_005779	10184	Hs.79299	NM_005779	ENSG00000145685	LHFPL2	-	lipoma HMGIC fusion partner-like 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr5-789	chr5	92907534	92911367	+	53.8	3833	"intron (NR_109818, intron 1 of 6)"	"intron (NR_109818, intron 1 of 6)"	-2401	NR_109825	441094	Hs.457407	NR_015369	ENSG00000237187	NR2F1-AS1	-	NR2F1 antisense RNA 1	ncRNA	53.77	10.19	5.276741904	2.12E-17
chr5-792	chr5	106978583	106979583	+	16	1000	"intron (NM_001962, intron 1 of 4)"	"intron (NM_001962, intron 1 of 4)"	27513	NM_001962	1946	Hs.288741	NM_001962	ENSG00000184349	EFNA5	AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS	ephrin A5	protein-coding	16	0.49	32.65306122	1.26E-14
chr5-793	chr5	107004109	107009230	+	96	5121	promoter-TSS (NM_001962)	promoter-TSS (NM_001962)	-73	NM_001962	1946	Hs.288741	NM_001962	ENSG00000184349	EFNA5	AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS	ephrin A5	protein-coding	96.01	5.82	16.49656357	1.01E-62
chr5-795	chr5	111560300	111561567	+	17.9	1267	"intron (NR_144931, intron 12 of 22)"	"intron (NR_144931, intron 12 of 22)"	-3047	NR_110559	101927023	Hs.571002	NR_110559	ENSG00000251076	LOC101927023	-	uncharacterized LOC101927023	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr5-797	chr5	112476068	112477068	+	16.6	1000	"intron (NM_001085377, intron 5 of 18)"	"intron (NM_001085377, intron 5 of 18)"	154044	NM_002387	4163	Hs.593171	NM_002387	ENSG00000171444	MCC	MCC1	mutated in colorectal cancers	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr5-802	chr5	131704274	131706898	+	55	2624	promoter-TSS (NR_110997)	promoter-TSS (NR_110997)	22	NR_110997	553103	Hs.570908	NR_110997	ENSG00000233006	LOC553103	-	uncharacterized LOC553103	ncRNA	55.05	7.77	7.084942085	2.06E-22
chr5-804	chr5	132491633	132492898	+	19.8	1265	Intergenic	AluSx1|SINE|Alu	104603	NM_002154	3308	Hs.90093	NM_002154	ENSG00000170606	HSPA4	APG-2|HEL-S-5a|HS24/P52|HSPH2|RY|hsp70|hsp70RY	heat shock protein family A (Hsp70) member 4	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr5-806	chr5	132596355	132598049	+	26.9	1694	"intron (NM_015082, intron 6 of 15)"	MER49|LTR|ERV1	166196	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA	26.88	5.34	5.033707865	3.94E-09
chr5-808	chr5	132695437	132696437	+	16.6	1000	"intron (NM_015082, intron 4 of 15)"	"intron (NM_015082, intron 4 of 15)"	67461	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr5-810	chr5	132734076	132736899	+	35.2	2823	"intron (NM_015082, intron 4 of 15)"	"intron (NM_015082, intron 4 of 15)"	27911	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA	35.2	7.77	4.53024453	3.74E-10
chr5-811	chr5	132762116	132763660	+	27.5	1544	TTS (NR_031621)	TTS (NR_031621)	510	NR_031621	100302134		NR_031621	ENSG00000221287	MIR1289-2	MIRN1289-2|hsa-mir-1289-2	microRNA 1289-2	ncRNA	27.52	3.4	8.094117647	1.25E-12
chr5-816	chr5	133042722	133043722	+	16	1000	Intergenic	Intergenic	-94999	NM_015082	23105	Hs.483390	NM_015082	ENSG00000053108	FSTL4	-	follistatin like 4	protein-coding	16	2.43	6.58436214	7.90E-07
chr5-817	chr5	133121074	133122074	+	15.4	1000	Intergenic	Intergenic	-127794	NR_131252	105664404	Hs.582536	NR_131252	ENSG00000249073	WSPAR	LncTCF7|TCONS_00009511	WNT signaling pathway activating non-coding RNA	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr5-826	chr5	134470867	134471867	+	16.6	1000	"intron (NM_001277348, intron 2 of 5)"	"intron (NM_001277348, intron 2 of 5)"	-95630	NR_105050	101927953	Hs.436898	NR_105049	ENSG00000249082	C5orf66-AS1	CTC-276P9.1|Epist	C5orf66 antisense RNA 1	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr5-828	chr5	134812918	134814178	+	19.8	1260	Intergenic	Intergenic	-25459	NM_001099221	497189	Hs.552091	NM_001099221	ENSG00000255833	TIFAB	-	TIFA inhibitor	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr5-83	chr5	1643642	1644897	+	22.4	1255	Intergenic	Intergenic	-10149	NR_003713	728613	Hs.720393	NR_003713		LOC728613	-	programmed cell death 6 pseudogene	pseudo	22.4	4.85	4.618556701	5.54E-07
chr5-830	chr5	134823495	134825818	+	46.7	2323	Intergenic	CpG	-36567	NM_001099221	497189	Hs.552091	NM_001099221	ENSG00000255833	TIFAB	-	TIFA inhibitor	protein-coding	46.73	5.34	8.75093633	9.94E-22
chr5-834	chr5	135311492	135312757	+	21.8	1265	Intergenic	Intergenic	-21401	NM_002302	3950	Hs.512580	NM_002302	ENSG00000145826	LECT2	chm-II|chm2	leukocyte cell derived chemotaxin 2	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr5-836	chr5	135414782	135416848	+	43.5	2066	TTS (NR_030583)	TTS (NR_030583)	472	NR_030583	100126299		NR_030583	ENSG00000270123	VTRNA2-1	CBL-3|CBL3|MIR886|MIRN886|VTRNA2|hsa-mir-886|hvg-5|nc886|svtRNA2-1a	vault RNA 2-1	ncRNA	43.53	4.85	8.975257732	4.10E-21
chr5-846	chr5	141079276	141080866	+	28.2	1590	Intergenic	Intergenic	-18271	NM_022481	64411	Hs.726187	NM_022481	ENSG00000120318	ARAP3	CENTD3|DRAG1	"ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3"	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr5-847	chr5	141086319	141087319	+	17.3	1000	Intergenic	L2a|LINE|L2	-25019	NM_022481	64411	Hs.726187	NM_022481	ENSG00000120318	ARAP3	CENTD3|DRAG1	"ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3"	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr5-849	chr5	141183314	141184314	+	16	1000	Intergenic	Intergenic	61953	NM_001278615	5097	Hs.79769	NM_002587	ENSG00000156453	PCDH1	PC42|PCDH42	protocadherin 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr5-851	chr5	141281957	141283221	+	18.6	1264	Intergenic	Intergenic	-6329	NR_033244	729080	Hs.730564	NR_033244		LOC729080	-	glycine cleavage system protein H (aminomethyl carrier) pseudogene	pseudo	18.56	2.91	6.378006873	1.38E-07
chr5-852	chr5	141701496	141704372	+	41.6	2876	"intron (NM_030964, intron 1 of 2)"	"intron (NM_030964, intron 1 of 2)"	1048	NM_001293289	81848	Hs.323308	NM_030964	ENSG00000187678	SPRY4	HH17	sprouty RTK signaling antagonist 4	protein-coding	41.61	7.77	5.355212355	1.22E-13
chr5-855	chr5	141952384	141953384	+	16	1000	Intergenic	Intergenic	40842	NM_033137	2246	Hs.483635	NM_000800	ENSG00000113578	FGF1	AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1	fibroblast growth factor 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr5-856	chr5	142023244	142024574	+	22.4	1330	promoter-TSS (NM_001257210)	promoter-TSS (NM_001257210)	-43	NM_001257210	2246	Hs.483635	NM_000800	ENSG00000113578	FGF1	AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1	fibroblast growth factor 1	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr5-857	chr5	142047934	142049216	+	21.1	1282	"intron (NM_001144935, intron 1 of 3)"	L2c|LINE|L2	16693	NM_001257209	2246	Hs.483635	NM_000800	ENSG00000113578	FGF1	AFGF|ECGF|ECGF-beta|ECGFA|ECGFB|FGF-1|FGF-alpha|FGFA|GLIO703|HBGF-1|HBGF1	fibroblast growth factor 1	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr5-858	chr5	145214455	145215455	+	17.3	1000	promoter-TSS (NM_138492)	promoter-TSS (NM_138492)	-23	NM_205846	153768	Hs.314261	NM_138492	ENSG00000186314	PRELID2	-	PRELI domain containing 2	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr5-859	chr5	145709788	145710788	+	16.6	1000	Intergenic	Intergenic	-8299	NM_002700	5459	Hs.553499	NM_002700	ENSG00000091010	POU4F3	BRN3C|DFNA15|DFNA42|DFNA52	POU class 4 homeobox 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr5-862	chr5	146255679	146258502	+	51.8	2823	"intron (NM_181678, intron 2 of 10)"	"intron (NM_181678, intron 2 of 10)"	1258	NM_001271948	5521	Hs.627618	NM_181674	ENSG00000156475	PPP2R2B	B55BETA|PP2AB55BETA|PP2ABBETA|PP2APR55B|PP2APR55BETA|PR2AB55BETA|PR2ABBETA|PR2APR55BETA|PR52B|PR55-BETA|PR55BETA|SCA12	protein phosphatase 2 regulatory subunit Bbeta	protein-coding	51.85	6.8	7.625	6.93E-22
chr5-863	chr5	148650818	148652732	+	30.1	1914	"intron (NM_001146337, intron 1 of 17)"	"intron (NM_001146337, intron 1 of 17)"	374	NM_152406	134265	Hs.62930	NM_152406	ENSG00000157510	AFAP1L1	-	actin filament associated protein 1 like 1	protein-coding	30.08	3.88	7.75257732	2.58E-13
chr5-872	chr5	149997601	149998863	+	19.8	1262	"exon (NM_001166208, exon 2 of 3)"	"exon (NM_001166208, exon 2 of 3)"	1026	NM_001166209	11346	Hs.435228	NM_007286	ENSG00000171992	SYNPO	-	synaptopodin	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr5-875	chr5	150948021	150949279	+	20.5	1258	promoter-TSS (NM_001447)	promoter-TSS (NM_001447)	-145	NM_001447	2196	Hs.591255	NM_001447	ENSG00000086570	FAT2	CDHF8|CDHR9|HFAT2|MEGF1	FAT atypical cadherin 2	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr5-878	chr5	153954560	153956164	+	32	1604	Intergenic	L3|LINE|CR1	20270	NR_036094	100422950		NR_036094	ENSG00000264760	MIR3141	mir-3141	microRNA 3141	ncRNA	32	7.28	4.395604396	2.08E-09
chr5-884	chr5	157450130	157451428	+	19.2	1298	Intergenic	Intergenic	-164596	NM_001195556	9685	Hs.644000	NM_014666	ENSG00000113282	CLINT1	CLINT|ENTH|EPN4|EPNR	clathrin interactor 1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr5-888	chr5	158731662	158732662	+	17.3	1000	Intergenic	Intergenic	25319	NM_002187	3593	Hs.674	NM_002187	ENSG00000113302	IL12B	CLMF|CLMF2|IL-12B|IMD28|IMD29|NKSF|NKSF2	interleukin 12B	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr5-890	chr5	159342342	159343610	+	17.3	1268	promoter-TSS (NM_000679)	promoter-TSS (NM_000679)	-764	NM_000679	147	Hs.368632	NM_000679	ENSG00000170214	ADRA1B	ADRA1|ALPHA1BAR	adrenoceptor alpha 1B	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr5-892	chr5	168273036	168274036	+	16.6	1000	"intron (NM_003062, intron 5 of 35)"	"intron (NM_003062, intron 5 of 35)"	-78276	NR_029632	407001		NR_029632	ENSG00000207739	MIR218-2	MIRN218-2|mir-218-2	microRNA 218-2	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr5-893	chr5	168277786	168278786	+	17.3	1000	"intron (NM_003062, intron 5 of 35)"	AluY|SINE|Alu	-83026	NR_029632	407001		NR_029632	ENSG00000207739	MIR218-2	MIRN218-2|mir-218-2	microRNA 218-2	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr5-894	chr5	168356527	168357527	+	16.6	1000	"intron (NM_003062, intron 4 of 35)"	"intron (NM_003062, intron 4 of 35)"	-83205	NR_109897	728095	Hs.145601	NR_109897		LOC728095	-	uncharacterized LOC728095	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr5-895	chr5	168405855	168406855	+	15.4	1000	"intron (NM_003062, intron 4 of 35)"	"intron (NM_003062, intron 4 of 35)"	-33877	NR_109897	728095	Hs.145601	NR_109897		LOC728095	-	uncharacterized LOC728095	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr5-901	chr5	169916236	169917236	+	15.4	1000	"intron (NM_001034838, intron 1 of 7)"	"intron (NM_001034838, intron 1 of 7)"	-14304	NM_001278339	30820	Hs.484111	NM_014592	ENSG00000182132	KCNIP1	KCHIP1|VABP	potassium voltage-gated channel interacting protein 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr5-904	chr5	170033899	170035441	+	24.3	1542	"intron (NM_014592, intron 1 of 7)"	"intron (NM_014592, intron 1 of 7)"	73804	NR_136214	105377716	Hs.570880	NR_136214	ENSG00000253591	LOC105377716	-	uncharacterized LOC105377716	ncRNA	24.32	3.88	6.268041237	6.68E-10
chr5-906	chr5	170625593	170626593	+	16	1000	"intron (NM_022897, intron 18 of 27)"	"intron (NM_022897, intron 18 of 27)"	-110195	NM_021025	30012	Hs.249125	NM_021025	ENSG00000164438	TLX3	HOX11L2|RNX	T-cell leukemia homeobox 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr5-907	chr5	170730145	170731145	+	16.6	1000	Intergenic	Intergenic	-5643	NM_021025	30012	Hs.249125	NM_021025	ENSG00000164438	TLX3	HOX11L2|RNX	T-cell leukemia homeobox 3	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr5-908	chr5	170942077	170943077	+	16	1000	Intergenic	Intergenic	95910	NM_003862	8817	Hs.87191	NM_003862	ENSG00000156427	FGF18	FGF-18|ZFGF5	fibroblast growth factor 18	protein-coding	16	1.94	8.24742268	7.67E-08
chr5-911	chr5	171232491	171236248	+	62.1	3757	Intergenic	Intergenic	21493	NM_001289970	644994	Hs.591740	NM_001289970		SMIM23	C5orf50	small integral membrane protein 23	protein-coding	62.09	10.68	5.813670412	3.83E-21
chr5-912	chr5	171919563	171920563	+	16.6	1000	Intergenic	AluSx|SINE|Alu	-38536	NM_001017995	285590	Hs.285666	NM_001017995	ENSG00000174705	SH3PXD2B	FAD49|FTHS|HOFI|KIAA1295|TKS4|TSK4	SH3 and PX domains 2B	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr5-918	chr5	172683309	172684739	+	20.5	1430	Intergenic	Intergenic	-21709	NM_004387	1482	Hs.54473	NM_004387	ENSG00000183072	NKX2-5	CHNG5|CSX|CSX1|HLHS2|NKX2.5|NKX2E|NKX4-1|VSD3	NK2 homeobox 5	protein-coding	20.48	0	21.09680742	5.97E-21
chr5-919	chr5	172717198	172718565	+	19.8	1367	Intergenic	Intergenic	38625	NM_003714	8614	Hs.233160	NM_003714	ENSG00000113739	STC2	STC-2|STCRP	stanniocalcin 2	protein-coding	19.84	0	20.43753219	2.52E-19
chr5-92	chr5	76114366	76115919	+	32.6	1553	"intron (NM_005242, intron 1 of 1)"	"intron (NM_005242, intron 1 of 1)"	340	NM_005242	2150	Hs.744181	NM_005242	ENSG00000164251	F2RL1	GPR11|PAR2	F2R like trypsin receptor 1	protein-coding	32.64	4.37	7.469107551	5.18E-14
chr5-920	chr5	180017462	180018462	+	17.3	1000	"intron (NM_052863, intron 1 of 2)"	CpG-21562	525	NM_052863	92304	Hs.62492	NM_052863	ENSG00000161055	SCGB3A1	HIN-1|HIN1|LU105|PnSP-2|UGRP2	secretoglobin family 3A member 1	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr5-921	chr5	87743	88743	+	16	1000	Intergenic	L1MB4|LINE|L1	-52130	NM_052909	153478	Hs.535800	NM_052909	ENSG00000153404	PLEKHG4B	-	pleckstrin homology and RhoGEF domain containing G4B	protein-coding	16	3.4	4.705882353	2.25E-05
chr5-923	chr5	1200438	1201438	+	16.6	1000	promoter-TSS (NM_001003841)	promoter-TSS (NM_001003841)	-772	NM_001003841	340024	Hs.481478	NM_001003841	ENSG00000174358	SLC6A19	B0AT1|HND	solute carrier family 6 member 19	protein-coding	16.64	0.49	33.95918367	3.68E-16
chr5-926	chr5	1723997	1727086	+	40.3	3089	Intergenic	MER70B|LTR|ERVL	-16558	NR_036240	100422966		NR_036240	ENSG00000263746	MIR4277	-	microRNA 4277	ncRNA	40.33	8.25	4.888484848	2.95E-12
chr5-931	chr5	1936396	1937396	+	16.6	1000	Intergenic	L1ME2z|LINE|L1	49451	NR_109912	101929081	Hs.519180	NR_109912	ENSG00000249326	CTD-2194D22.4	-	uncharacterized LOC101929081	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr5-933	chr5	2027504	2028504	+	15.4	1000	Intergenic	LTR12_|LTR|ERV1	140559	NR_109912	101929081	Hs.519180	NR_109912	ENSG00000249326	CTD-2194D22.4	-	uncharacterized LOC101929081	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr5-939	chr5	2543636	2547582	+	62.7	3946	Intergenic	Intergenic	206160	NM_001134222	153572	Hs.282089	NM_033267	ENSG00000170561	IRX2	IRXA2	iroquois homeobox 2	protein-coding	62.73	15.53	4.039278815	1.52E-15
chr5-942	chr5	3104137	3105137	+	16.6	1000	Intergenic	Intergenic	-73312	NR_104617	102467074	Hs.575250	NR_104617	ENSG00000249808	LINC01377	-	long intergenic non-protein coding RNA 1377	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr5-949	chr5	6513838	6514838	+	16	1000	Intergenic	MER101-int|LTR|ERV1	65602	NM_001145161	134111	Hs.126856	NM_001145161	ENSG00000215218	UBE2QL1	-	ubiquitin conjugating enzyme E2 Q family like 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr5-951	chr5	7785368	7786368	+	16	1000	"intron (NM_020546, intron 19 of 24)"	"intron (NM_020546, intron 19 of 24)"	65735	NM_001089584	134121	Hs.709979	NM_001089584	ENSG00000215217	C5orf49	-	chromosome 5 open reading frame 49	protein-coding	16	2.91	5.498281787	4.98E-06
chr5-954	chr5	14264353	14265353	+	16.6	1000	"intron (NM_007118, intron 1 of 56)"	"intron (NM_007118, intron 1 of 56)"	121042	NM_007118	7204	Hs.130031	NM_007118	ENSG00000038382	TRIO	ARHGEF23|MEBAS|MRD44|tgat	trio Rho guanine nucleotide exchange factor	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr5-955	chr5	14353792	14354792	+	16	1000	"intron (NM_007118, intron 11 of 56)"	"intron (NM_007118, intron 11 of 56)"	210481	NM_007118	7204	Hs.130031	NM_007118	ENSG00000038382	TRIO	ARHGEF23|MEBAS|MRD44|tgat	trio Rho guanine nucleotide exchange factor	protein-coding	16	3.88	4.12371134	7.91E-05
chr5-956	chr5	14891869	14892869	+	16.6	1000	Intergenic	Intergenic	-20482	NM_054027	56172	Hs.156727	NM_054027	ENSG00000154122	ANKH	ANK|CCAL2|CMDJ|CPPDD|HANK|MANK	ANKH inorganic pyrophosphate transport regulator	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr5-958	chr5	31702494	31703494	+	16	1000	"intron (NM_178140, intron 1 of 24)"	"intron (NM_178140, intron 1 of 24)"	63477	NM_178140	23037	Hs.481819	NM_015022	ENSG00000133401	PDZD2	AIPC|PAPIN|PDZK3|PIN1	PDZ domain containing 2	protein-coding	16	1.46	10.95890411	3.44E-09
chr5-961	chr5	32974781	32975781	+	15.4	1000	Intergenic	Intergenic	27732	NR_033832	340113	Hs.434404	NR_033832	ENSG00000248279	LINC02120	-	long intergenic non-protein coding RNA 2120	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr5-962	chr5	35195745	35197109	+	22.4	1364	"intron (NM_000949, intron 1 of 9)"	"intron (NM_000949, intron 1 of 9)"	34264	NM_000949	5618	Hs.368587	NM_000949	ENSG00000113494	PRLR	HPRL|MFAB|hPRLrI	prolactin receptor	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr5-963	chr5	35940850	35941850	+	16.6	1000	Intergenic	ERVL-B4-int|LTR|ERVL	2447	NR_104630	100506406	Hs.116864	NR_104630	ENSG00000249748	LOC100506406	-	uncharacterized LOC100506406	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr5-966	chr5	38188759	38189759	+	15.4	1000	Intergenic	Intergenic	40677	NR_134272	101929745	Hs.374715	NR_134272	ENSG00000248461	LINC02119	-	long intergenic non-protein coding RNA 2119	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr5-969	chr5	38767380	38768380	+	15.4	1000	"intron (NR_109951, intron 2 of 3)"	"intron (NR_109951, intron 2 of 3)"	-47505	NR_104631	101926904	Hs.634191	NR_104631	ENSG00000249740	LINC01265	-	long intergenic non-protein coding RNA 1265	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr5-97	chr5	137825351	137827081	+	33.3	1730	Intergenic	Intergenic	25035	NM_001964	1958	Hs.326035	NM_001964	ENSG00000120738	EGR1	AT225|G0S30|KROX-24|NGFI-A|TIS8|ZIF-268|ZNF225	early growth response 1	protein-coding	33.28	6.31	5.274167987	2.25E-11
chr5-975	chr5	52544338	52545338	+	15.4	1000	Intergenic	MER45B|DNA|hAT-Tip100	139166	NR_104654	257396	Hs.12326	NR_034107	ENSG00000247796	LOC257396	-	uncharacterized LOC257396	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr5-977	chr5	53163136	53164136	+	16	1000	Intergenic	MIRc|SINE|MIR	83793	NR_030307	693166		NR_030307	ENSG00000207627	MIR581	MIRN581|hsa-mir-581	microRNA 581	ncRNA	16	1.94	8.24742268	7.67E-08
chr5-978	chr5	54190604	54191604	+	16.6	1000	Intergenic	Intergenic	90310	NM_007036	11082	Hs.129944	NM_007036	ENSG00000164283	ESM1	endocan	endothelial cell specific molecule 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr5-980	chr5	54455963	54459946	+	51.8	3983	"intron (NR_131340, intron 2 of 2)"	AluSx1|SINE|Alu	2008	NR_131338	493869	Hs.289044	NM_001008397	ENSG00000164294	GPX8	EPLA847|GPx-8|GSHPx-8|UNQ847	glutathione peroxidase 8 (putative)	protein-coding	51.85	9.71	5.339855819	1.19E-16
chr5-989	chr5	59700853	59701853	+	16	1000	"intron (NM_001165899, intron 1 of 16)"	"intron (NM_001165899, intron 1 of 16)"	-82187	NR_024617	25859	Hs.146312	NM_001039499	ENSG00000152931	PART1	NCRNA00206	prostate androgen-regulated transcript 1 (non-protein coding)	ncRNA	16	0	16.4818808	1.26E-14
chr5-992	chr5	61113158	61114158	+	16.6	1000	Intergenic	Intergenic	-82133	NR_105000	100506526	Hs.662277	NR_105000		C5orf64-AS1	-	C5orf64 antisense RNA 1	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr5-993	chr5	61439754	61440754	+	16	1000	Intergenic	Intergenic	-161735	NM_001243953	3796	Hs.558351	NM_004520	ENSG00000068796	KIF2A	CDCBM3|HK2|KIF2	kinesin family member 2A	protein-coding	16	2.91	5.498281787	4.98E-06
chr5-994	chr5	66200054	66201054	+	14.1	1000	"intron (NM_001164664, intron 4 of 28)"	AT_rich|Low_complexity|Low_complexity	-54144	NM_001290226	375449	Hs.595458	NM_015183	ENSG00000069020	MAST4	-	microtubule associated serine/threonine kinase family member 4	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr5-995	chr5	68787111	68790573	+	64	3462	"intron (NM_001205254, intron 1 of 8)"	CpG	252	NM_001205254	100506658	Hs.592605	NM_002538	ENSG00000197822	OCLN	BLCPMG|PPP1R115	occludin	protein-coding	64.01	11.65	5.494420601	3.99E-21
chr5-997	chr5	71424410	71425410	+	15.4	1000	"intron (NM_005909, intron 2 of 6)"	"intron (NM_005909, intron 2 of 6)"	21815	NM_005909	4131	Hs.335079	NM_005909	ENSG00000131711	MAP1B	FUTSCH|MAP5|PPP1R102	microtubule associated protein 1B	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr5-999	chr5	72012966	72014284	+	22.4	1318	Intergenic	Intergenic	-57129	NR_105007	102477328	Hs.254516	NR_105007	ENSG00000248371	LINC02056	-	long intergenic non-protein coding RNA 2056	ncRNA	22.4	0	23.07463312	1.33E-22
chr6-1001	chr6	167828683	167829683	+	16.6	1000	Intergenic	Intergenic	-31185	NM_004610	6953	Hs.351	NM_004610	ENSG00000203690	TCP10	TCP10A	t-complex 10	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr6-1002	chr6	168384704	168385704	+	16	1000	Intergenic	MER51E|LTR|ERV1	-7585	NM_001129895	100128124	Hs.448059	NM_001129895		HGC6.3	-	uncharacterized LOC100128124	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-1004	chr6	168955020	168956020	+	16.6	1000	"intron (NM_001166412, intron 7 of 12)"	"intron (NM_001166412, intron 7 of 12)"	113689	NM_001166412	64094	Hs.487200	NM_022138	ENSG00000112562	SMOC2	DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1	SPARC related modular calcium binding 2	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr6-1005	chr6	168985105	168986105	+	17.9	1000	"intron (NM_001166412, intron 7 of 12)"	L1ME2z|LINE|L1	143774	NM_001166412	64094	Hs.487200	NM_022138	ENSG00000112562	SMOC2	DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1	SPARC related modular calcium binding 2	protein-coding	17.92	1.46	12.2739726	2.41E-11
chr6-1008	chr6	170246493	170247493	+	17.9	1000	Intergenic	Intergenic	-48072	NR_026781	401288	Hs.556095	NM_207502	ENSG00000229214	LINC00242	C6orf122|NCRNA00242|dJ266L20.5	long intergenic non-protein coding RNA 242	ncRNA	17.92	3.4	5.270588235	8.42E-07
chr6-101	chr6	34111511	34113308	+	32.6	1797	"intron (NM_001256811, intron 1 of 9)"	CpG	1505	NM_001256811	2914	Hs.429018	NM_000841	ENSG00000124493	GRM4	GPRC1D|MGLUR4|mGlu4	glutamate metabotropic receptor 4	protein-coding	32.64	5.82	5.608247423	2.32E-11
chr6-1021	chr6	1077231	1078231	+	15.4	1000	"intron (NR_027116, intron 1 of 3)"	"intron (NR_027116, intron 1 of 3)"	23836	NR_027116	285768	Hs.209463	NR_027115		LINC01622	-	long intergenic non-protein coding RNA 1622	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr6-1023	chr6	1168116	1171417	+	40.3	3301	Intergenic	Intergenic	-68199	NR_027115	285768	Hs.209463	NR_027115		LINC01622	-	long intergenic non-protein coding RNA 1622	ncRNA	40.33	6.8	5.930882353	2.14E-14
chr6-1024	chr6	1211702	1212702	+	16.6	1000	Intergenic	L1ME2z|LINE|L1	-100473	NM_033260	94234	Hs.591352	NM_033260	ENSG00000164379	FOXQ1	HFH1	forkhead box Q1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr6-1028	chr6	1594733	1595733	+	17.3	1000	Intergenic	Intergenic	-10533	NR_125804	101927703	Hs.607964	NR_125804		FOXCUT	LINC01379|TCONS_00011636	FOXC1 upstream transcript (non-protein coding)	ncRNA	17.28	0.97	17.81443299	2.06E-12
chr6-1029	chr6	2698341	2699679	+	21.1	1338	"intron (NM_001347872, intron 2 of 12)"	"intron (NM_001347872, intron 2 of 12)"	52190	NM_001012418	340156	Hs.127830	NM_001012418	ENSG00000145949	MYLK4	SgK085	myosin light chain kinase family member 4	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr6-1032	chr6	3229266	3232112	+	44.8	2846	Intergenic	Intergenic	-2721	NM_178012	347733	Hs.300701	NM_178012	ENSG00000137285	TUBB2B	PMGYSA|bA506K6.1	tubulin beta 2B class IIb	protein-coding	44.81	4.85	9.239175258	4.43E-22
chr6-1034	chr6	3783132	3785437	+	34.6	2305	Intergenic	AluSx|SINE|Alu	-32038	NM_183373	221749	Hs.484500	NM_183373	ENSG00000168994	PXDC1	C6orf145	PX domain containing 1	protein-coding	34.56	2.43	14.22222222	4.68E-22
chr6-1036	chr6	3905710	3909399	+	46.1	3689	Intergenic	MER4E|LTR|ERV1	57954	NM_012135	26240	Hs.140944	NM_012135	ENSG00000145945	FAM50B	D6S2654E|X5L	family with sequence similarity 50 member B	protein-coding	46.09	8.74	5.273455378	3.81E-15
chr6-1043	chr6	7490513	7491513	+	16	1000	Intergenic	Intergenic	-50795	NM_001008844	1832	Hs.519873	NM_004415	ENSG00000096696	DSP	DCWHKTA|DP	desmoplakin	protein-coding	16	1.94	8.24742268	7.67E-08
chr6-1044	chr6	7569462	7570462	+	16.6	1000	"intron (NM_001008844, intron 12 of 23)"	AluSp|SINE|Alu	-20470	NM_152551	154007	Hs.13366	NM_152551	ENSG00000168566	SNRNP48	C6orf151|dJ336K20B.1|dJ512B11.2	small nuclear ribonucleoprotein U11/U12 subunit 48	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr6-1049	chr6	10420883	10421883	+	15.4	1000	Intergenic	Intergenic	-1586	NM_001042425	7020	Hs.519880	NM_003220	ENSG00000137203	TFAP2A	AP-2|AP-2alpha|AP2TF|BOFS|TFAP2	transcription factor AP-2 alpha	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-1055	chr6	13012737	13013737	+	15.4	1000	promoter-TSS (NM_001322314)	promoter-TSS (NM_001322314)	-651	NM_001322314	221692	Hs.436996	NM_030948	ENSG00000112137	PHACTR1	RPEL|RPEL1|dJ257A7.2	phosphatase and actin regulator 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-1063	chr6	17968429	17969429	+	16.6	1000	"intron (NM_001243423, intron 2 of 2)"	"intron (NM_001243423, intron 2 of 2)"	18925	NM_001105568	63971	Hs.94499	NM_022113	ENSG00000137177	KIF13A	RBKIN|bA500C11.2	kinesin family member 13A	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr6-1064	chr6	17986746	17987746	+	16.6	1000	"intron (NM_001243423, intron 2 of 2)"	"intron (NM_001243423, intron 2 of 2)"	608	NM_001105568	63971	Hs.94499	NM_022113	ENSG00000137177	KIF13A	RBKIN|bA500C11.2	kinesin family member 13A	protein-coding	16.64	0	17.14115603	3.68E-16
chr6-1066	chr6	18096347	18097347	+	17.3	1000	Intergenic	Intergenic	26004	NM_198586	378884	Hs.348351	NM_198586	ENSG00000187566	NHLRC1	EPM2A|EPM2B|MALIN|bA204B7.2	NHL repeat containing E3 ubiquitin protein ligase 1	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr6-1070	chr6	18388412	18390445	+	35.8	2033	"intron (NM_182757, intron 1 of 7)"	"intron (NM_182757, intron 1 of 7)"	1847	NM_182757	255488	Hs.148741	NM_182757	ENSG00000137393	RNF144B	IBRDC2|PIR2|bA528A10.3|p53RFP	ring finger protein 144B	protein-coding	35.84	6.8	5.270588235	3.95E-12
chr6-1074	chr6	28173418	28174418	+	16	1000	Intergenic	Intergenic	12789	NR_002936	222699	Hs.161441	NR_002936		TOB2P1	TOB2P|TOB4p|p373c6.3	"transducer of ERBB2, 2 pseudogene 1"	pseudo	16	0.97	16.49484536	3.54E-11
chr6-1078	chr6	33838300	33839300	+	16.6	1000	Intergenic	Intergenic	25884	NR_038989	100507584	Hs.547104	NR_038989	ENSG00000249346	LINC01016	-	long intergenic non-protein coding RNA 1016	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr6-1080	chr6	33954034	33955285	+	19.8	1251	Intergenic	Charlie1a|DNA|hAT-Charlie	13169	NR_031681	100302123		NR_031681	ENSG00000221697	MIR1275	MIRN1275|hsa-mir-1275|mir-1275	microRNA 1275	ncRNA	19.84	3.88	5.113402062	7.67E-07
chr6-1084	chr6	34433413	34434977	+	26.2	1564	"intron (NM_020804, intron 1 of 9)"	CpG	357	NM_020804	29993	Hs.520087	NM_020804	ENSG00000124507	PACSIN1	SDPI	protein kinase C and casein kinase substrate in neurons 1	protein-coding	26.24	5.34	4.913857678	2.00E-08
chr6-1085	chr6	34482610	34485266	+	39.7	2656	"intron (NM_001199583, intron 1 of 9)"	"intron (NM_001199583, intron 1 of 9)"	1289	NM_001199583	29993	Hs.520087	NM_020804	ENSG00000124507	PACSIN1	SDPI	protein kinase C and casein kinase substrate in neurons 1	protein-coding	39.69	8.74	4.541189931	1.21E-11
chr6-1086	chr6	35159138	35160414	+	21.1	1276	Intergenic	Intergenic	-22063	NM_001303136	222663	Hs.12923	NM_152753	ENSG00000146197	SCUBE3	CEGF3	"signal peptide, CUB domain and EGF like domain containing 3"	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr6-1089	chr6	36303355	36304355	+	15.4	1000	"intron (NM_001010903, intron 1 of 11)"	"intron (NM_001010903, intron 1 of 11)"	807	NM_001010903	389384	Hs.162104	NM_001010903	ENSG00000189325	C6orf222	-	chromosome 6 open reading frame 222	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr6-1095	chr6	37650583	37652689	+	35.2	2106	"intron (NM_153487, intron 1 of 16)"	LTR16C|LTR|ERVL	14130	NM_153487	266727	Hs.437993	NM_153487	ENSG00000112139	MDGA1	GPIM|MAMDC3	MAM domain containing glycosylphosphatidylinositol anchor 1	protein-coding	35.2	6.8	5.176470588	2.10E-11
chr6-1097	chr6	38769848	38770848	+	16.6	1000	"intron (NM_001206927, intron 21 of 92)"	MIRb|SINE|MIR	87231	NM_001206927	1769	Hs.520106	NM_001371	ENSG00000124721	DNAH8	ATPase|hdhc9	dynein axonemal heavy chain 8	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr6-1099	chr6	39279907	39283637	+	66.6	3730	TTS (NM_001135105)	TTS (NM_001135105)	464	NM_031460	89822	Hs.162282	NM_031460	ENSG00000124780	KCNK17	K2p17.1|TALK-2|TALK2|TASK-4|TASK4	potassium two pore domain channel subfamily K member 17	protein-coding	66.57	13.11	5.077803204	1.86E-20
chr6-1101	chr6	39759815	39760815	+	16.6	1000	promoter-TSS (NM_015345)	promoter-TSS (NM_015345)	156	NM_001201427	23500	Hs.357128	NM_015345	ENSG00000146122	DAAM2	dJ90A20A.1	dishevelled associated activator of morphogenesis 2	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr6-1103	chr6	40278682	40279682	+	16.6	1000	Intergenic	Intergenic	44563	NR_038887	401260	Hs.654837	NM_001001705		LINC00951	-	long intergenic non-protein coding RNA 951	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr6-1105	chr6	40458207	40459207	+	17.3	1000	"intron (NM_020737, intron 1 of 2)"	L2|LINE|L2	96496	NM_020737	57497	Hs.250015	NM_020737	ENSG00000156564	LRFN2	FIGLER2|KIAA1246|SALM1	leucine rich repeat and fibronectin type III domain containing 2	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr6-1108	chr6	41338981	41344040	+	97.9	5059	Intergenic	CpG	37982	NM_001199510	9436	Hs.194721	NM_004828	ENSG00000096264	NCR2	CD336|LY95|NK-p44|NKP44|dJ149M18.1	natural cytotoxicity triggering receptor 2	protein-coding	97.93	11.16	8.775089606	2.96E-44
chr6-1110	chr6	41348882	41350162	+	17.3	1280	Intergenic	Intergenic	45994	NM_001199510	9436	Hs.194721	NM_004828	ENSG00000096264	NCR2	CD336|LY95|NK-p44|NKP44|dJ149M18.1	natural cytotoxicity triggering receptor 2	protein-coding	17.28	0	17.80043126	3.68E-16
chr6-1111	chr6	41582713	41583713	+	16	1000	Intergenic	Intergenic	16752	NR_039784	100616178		NR_039784	ENSG00000266494	MIR4641	-	microRNA 4641	ncRNA	16	1.46	10.95890411	3.44E-09
chr6-1115	chr6	43813418	43814418	+	17.3	1000	Intergenic	Tigger3b|DNA|TcMar-Tigger	-44847	NR_024478	100132354	Hs.376232	NR_024478		LINC01512	HI-LNC77	long intergenic non-protein coding RNA 1512	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr6-1117	chr6	43869927	43871525	+	23	1598	"intron (NR_024478, intron 1 of 1)"	L2a|LINE|L2	11961	NR_024478	100132354	Hs.376232	NR_024478		LINC01512	HI-LNC77	long intergenic non-protein coding RNA 1512	ncRNA	23.04	2.43	9.481481481	2.61E-12
chr6-1118	chr6	43874959	43876237	+	21.1	1278	"intron (NR_024478, intron 1 of 1)"	"intron (NR_024478, intron 1 of 1)"	16833	NR_024478	100132354	Hs.376232	NR_024478		LINC01512	HI-LNC77	long intergenic non-protein coding RNA 1512	ncRNA	21.12	3.4	6.211764706	2.41E-08
chr6-1124	chr6	44752082	44753566	+	23.7	1484	Intergenic	Intergenic	-233206	NR_134609	105375075	Hs.123393	NR_134609		LOC105375075	-	uncharacterized LOC105375075	ncRNA	23.68	4.85	4.882474227	1.15E-07
chr6-1128	chr6	45458955	45460857	+	28.8	1902	"intron (NM_001015051, intron 6 of 7)"	"intron (NM_001015051, intron 6 of 7)"	69592	NM_001278478	860	Hs.535845	NM_004348	ENSG00000124813	RUNX2	AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA	runt related transcription factor 2	protein-coding	28.8	6.8	4.235294118	5.07E-08
chr6-113	chr6	108059957	108063230	+	58.2	3273	"intron (NM_198081, intron 5 of 7)"	"intron (NM_198081, intron 5 of 7)"	-7993	NM_001286409	256380	Hs.486109	NM_198081	ENSG00000146285	SCML4	dJ47M23.1	sex comb on midleg-like 4 (Drosophila)	protein-coding	58.25	8.25	7.060606061	4.03E-23
chr6-1133	chr6	45608874	45609874	+	17.3	1000	Intergenic	Intergenic	219060	NM_001278478	860	Hs.535845	NM_004348	ENSG00000124813	RUNX2	AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA	runt related transcription factor 2	protein-coding	17.28	0	17.80043126	3.68E-16
chr6-1135	chr6	45680900	45682229	+	20.5	1329	Intergenic	Intergenic	223770	NR_045674	53405	Hs.485489	NM_016929	ENSG00000112782	CLIC5	DFNB102|DFNB103|MST130|MSTP130	chloride intracellular channel 5	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr6-1136	chr6	46165909	46167164	+	16.6	1255	Intergenic	AluSc|SINE|Alu	-27789	NM_001290073	59084	Hs.35198	NM_021572	ENSG00000112796	ENPP5	NPP-5|NPP5	ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr6-1141	chr6	47718051	47719051	+	16	1000	Intergenic	AluSg7|SINE|Alu	-31224	NM_181744	221391	Hs.213717	NM_181744	ENSG00000124818	OPN5	GPR136|GRP136|PGR12|TMEM13	opsin 5	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-1144	chr6	52029723	52031755	+	33.9	2032	Intergenic	Intergenic	-14918	NR_131248	101154644	Hs.582788	NR_131248		LINCMD1	LINC-MD1|MIR133BHG	"long intergenic non-protein coding RNA, muscle differentiation 1"	ncRNA	33.92	7.77	4.365508366	1.68E-09
chr6-1148	chr6	52055675	52056989	+	25.6	1314	TTS (NM_002190)	TTS (NM_002190)	5147	NM_002190	3605	Hs.41724	NM_002190	ENSG00000112115	IL17A	CTLA-8|CTLA8|IL-17|IL-17A|IL17	interleukin 17A	protein-coding	25.6	4.85	5.278350515	4.26E-09
chr6-1150	chr6	52089849	52091517	+	27.5	1668	Intergenic	AluSx1|SINE|Alu	18615	NM_052872	112744	Hs.272295	NM_052872	ENSG00000112116	IL17F	CANDF6|IL-17F|ML-1|ML1	interleukin 17F	protein-coding	27.52	4.37	6.297482838	1.19E-10
chr6-1151	chr6	52093972	52095796	+	29.4	1824	Intergenic	MLT1G3|LTR|ERVL-MaLR	14414	NM_052872	112744	Hs.272295	NM_052872	ENSG00000112116	IL17F	CANDF6|IL-17F|ML-1|ML1	interleukin 17F	protein-coding	29.44	6.8	4.329411765	1.16E-08
chr6-1152	chr6	52099027	52102042	+	42.2	3015	TTS (NM_052872)	TTS (NM_052872)	8764	NM_052872	112744	Hs.272295	NM_052872	ENSG00000112116	IL17F	CANDF6|IL-17F|ML-1|ML1	interleukin 17F	protein-coding	42.25	8.74	4.83409611	5.23E-13
chr6-1154	chr6	52116500	52117500	+	16	1000	Intergenic	Intergenic	-7702	NM_052872	112744	Hs.272295	NM_052872	ENSG00000112116	IL17F	CANDF6|IL-17F|ML-1|ML1	interleukin 17F	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-1155	chr6	52737231	52738231	+	16.6	1000	Intergenic	Intergenic	-26838	NM_153699	221357	Hs.646984	NM_153699	ENSG00000182793	GSTA5	-	glutathione S-transferase alpha 5	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr6-1158	chr6	80246347	80247755	+	24.3	1408	promoter-TSS (NM_001122769)	promoter-TSS (NM_001122769)	96	NM_181714	167691	Hs.21945	NM_181714	ENSG00000135338	LCA5	C6orf152	"LCA5, lebercilin"	protein-coding	24.32	5.34	4.554307116	9.72E-08
chr6-1160	chr6	90144142	90145534	+	21.1	1392	"intron (NM_014942, intron 1 of 15)"	MamRep1879|DNA|hAT?	1941	NM_001242809	22881	Hs.702213	NM_014942	ENSG00000135299	ANKRD6	-	ankyrin repeat domain 6	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr6-1164	chr6	106506266	106507266	+	16.6	1000	Intergenic	Intergenic	-27429	NM_001198	639	Hs.436023	NM_001198	ENSG00000057657	PRDM1	BLIMP1|PRDI-BF1	PR/SET domain 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr6-1168	chr6	106562425	106564116	+	26.9	1691	Intergenic	Intergenic	16533	NM_182907	639	Hs.436023	NM_001198	ENSG00000057657	PRDM1	BLIMP1|PRDI-BF1	PR/SET domain 1	protein-coding	26.88	4.85	5.542268041	7.61E-10
chr6-117	chr6	150396716	150398240	+	30.1	1524	Intergenic	Intergenic	-7195	NM_024518	79465	Hs.15422	NM_024518	ENSG00000131019	ULBP3	N2DL-3|NKG2DL3|RAET1N	UL16 binding protein 3	protein-coding	30.08	3.88	7.75257732	2.58E-13
chr6-1176	chr6	110715856	110716856	+	16	1000	"intron (NM_004032, intron 3 of 3)"	MLT2B4|LTR|ERVL	20397	NM_003649	8528	Hs.591348	NM_003649	ENSG00000203797	DDO	DASOX|DDO-1|DDO-2	D-aspartate oxidase	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-1177	chr6	112626596	112627596	+	16.6	1000	"intron (NR_121193, intron 2 of 2)"	"intron (NR_121193, intron 2 of 2)"	-41436	NM_001013734	442247	Hs.448264	NM_001013734	ENSG00000251258	RFPL4B	RNF211	ret finger protein like 4B	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr6-1178	chr6	113814611	113816315	+	26.2	1704	Intergenic	Intergenic	155814	NR_125844	101927686	Hs.402044	NR_125844	ENSG00000230943	LOC101927686	-	uncharacterized LOC101927686	ncRNA	26.24	6.31	4.158478605	2.77E-07
chr6-1179	chr6	114319904	114320904	+	16	1000	"intron (NR_125845, intron 4 of 9)"	"intron (NR_125845, intron 4 of 9)"	-28045	NR_033441	3066	Hs.3352	NM_001527	ENSG00000196591	HDAC2	HD2|RPD3|YAF1	histone deacetylase 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr6-1181	chr6	125647748	125649202	+	21.1	1454	Intergenic	MIR|SINE|MIR	-25193	NM_016063	51020	Hs.32826	NM_016063	ENSG00000111906	HDDC2	C6orf74|CGI-130|NS5ATP2|dJ167O5.2	HD domain containing 2	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr6-1183	chr6	126049012	126050012	+	16	1000	Intergenic	MamGypLTR1d|LTR|Gypsy	-21220	NM_012259	23493	Hs.144287	NM_012259	ENSG00000135547	HEY2	CHF1|GRIDLOCK|GRL|HERP1|HESR2|HRT2|bHLHb32	hes related family bHLH transcription factor with YRPW motif 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-1185	chr6	132127698	132130271	+	41.6	2573	promoter-TSS (NM_006208)	promoter-TSS (NM_006208)	-172	NM_006208	5167	Hs.527295	NM_006208	ENSG00000197594	ENPP1	ARHR2|COLED|M6S1|NPP1|NPPS|PC-1|PCA1|PDNP1	ectonucleotide pyrophosphatase/phosphodiesterase 1	protein-coding	41.61	5.82	7.149484536	5.30E-17
chr6-1189	chr6	134639456	134640456	+	16	1000	promoter-TSS (NM_001143676)	promoter-TSS (NM_001143676)	-760	NM_001143676	6446	Hs.510078	NM_005627	ENSG00000118515	SGK1	SGK	serum/glucocorticoid regulated kinase 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-1192	chr6	134981233	134982233	+	16.6	1000	Intergenic	Intergenic	-120590	NR_125855	101928304	Hs.555076	NR_125855		LOC101928304	-	uncharacterized LOC101928304	ncRNA	16.64	1.46	11.39726027	2.99E-10
chr6-1202	chr6	137463830	137464830	+	18.6	1000	TTS (NM_052962)	TTS (NM_052962)	30455	NM_052962	116379	Hs.126891	NM_052962	ENSG00000164485	IL22RA2	CRF2-10|CRF2-S1|CRF2X|IL-22BP|IL-22R-alpha-2|IL-22RA2|ZCYTOR16	interleukin 22 receptor subunit alpha 2	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr6-1203	chr6	137478009	137482910	+	87.1	4901	"intron (NM_181310, intron 2 of 4)"	"intron (NM_181310, intron 2 of 4)"	14326	NM_052962	116379	Hs.126891	NM_052962	ENSG00000164485	IL22RA2	CRF2-10|CRF2-S1|CRF2X|IL-22BP|IL-22R-alpha-2|IL-22RA2|ZCYTOR16	interleukin 22 receptor subunit alpha 2	protein-coding	87.05	17.96	4.84688196	4.06E-25
chr6-1208	chr6	138417782	138418782	+	16.6	1000	"intron (NM_022121, intron 1 of 2)"	"intron (NM_022121, intron 1 of 2)"	10378	NM_022121	64065	Hs.201446	NM_022121	ENSG00000112378	PERP	KCP1|KRTCAP1|PIGPC1|THW|dJ496H19.1	"PERP, TP53 apoptosis effector"	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr6-1214	chr6	139449629	139450629	+	15.4	1000	Intergenic	AluSg|SINE|Alu	-6120	NM_016217	51696	Hs.197644	NM_016217	ENSG00000112406	HECA	HDC|HDCL|HHDC|dJ225E12.1	"hdc homolog, cell cycle regulator"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-1217	chr6	148507685	148508685	+	16.6	1000	Intergenic	Intergenic	-85227	NM_001346505	23328	Hs.193133	NM_015278	ENSG00000111961	SASH1	SH3D6A|dJ323M4.1	SAM and SH3 domain containing 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr6-1220	chr6	149342251	149343251	+	16.6	1000	"intron (NM_005715, intron 7 of 7)"	"intron (NM_005715, intron 7 of 7)"	11046	NR_134599	105378047	Hs.659484	NR_134599		LOC105378047	-	uncharacterized LOC105378047	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr6-1224	chr6	150594498	150595784	+	18.6	1286	Intergenic	Intergenic	-94887	NM_203395	389434	Hs.310225	NM_203395	ENSG00000009765	IYD	C6orf71|DEHAL1|IYD-1|TDH4	iodotyrosine deiodinase	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr6-1226	chr6	150679457	150683072	+	47.4	3615	Intergenic	L1PA8|LINE|L1	-8764	NM_203395	389434	Hs.310225	NM_203395	ENSG00000009765	IYD	C6orf71|DEHAL1|IYD-1|TDH4	iodotyrosine deiodinase	protein-coding	47.37	7.77	6.096525097	1.86E-17
chr6-1227	chr6	150697485	150698485	+	16.6	1000	"intron (NR_134655, intron 1 of 5)"	AluJr4|SINE|Alu	7957	NM_001318495	389434	Hs.310225	NM_203395	ENSG00000009765	IYD	C6orf71|DEHAL1|IYD-1|TDH4	iodotyrosine deiodinase	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr6-1235	chr6	158134463	158138534	+	55.7	4071	Intergenic	AluJb|SINE|Alu	-107705	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	55.69	10.68	5.214419476	2.00E-17
chr6-1236	chr6	158149423	158150423	+	15.4	1000	Intergenic	AluSx1|SINE|Alu	-94280	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr6-1237	chr6	158192309	158193309	+	16	1000	Intergenic	AluSx1|SINE|Alu	-51394	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-124	chr6	6545961	6546961	+	22.4	1000	"intron (NR_026970, intron 3 of 7)"	CpG	-42473	NM_004271	9450	Hs.653138	NM_004271	ENSG00000112799	LY86	MD-1|MD1|MMD-1|dJ80N2.1	lymphocyte antigen 86	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr6-1242	chr6	158300404	158301404	+	17.3	1000	"intron (NM_016224, intron 4 of 17)"	"intron (NM_016224, intron 4 of 17)"	56701	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr6-1243	chr6	158305048	158306048	+	16.6	1000	"intron (NM_016224, intron 4 of 17)"	"intron (NM_016224, intron 4 of 17)"	61345	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr6-1246	chr6	159084496	159090426	+	94.1	5930	"intron (NM_001318745, intron 2 of 14)"	"intron (NM_001318745, intron 2 of 14)"	3026	NM_001318745	94120	Hs.436977	NM_001009991	ENSG00000164674	SYTL3	SLP3	synaptotagmin like 3	protein-coding	94.09	16.5	5.702424242	7.68E-31
chr6-1251	chr6	159593840	159595232	+	21.8	1392	"intron (NM_032532, intron 1 of 22)"	"intron (NM_032532, intron 1 of 22)"	-3497	NR_121668	101929122	Hs.134215	NR_121668		LOC101929122	-	uncharacterized LOC101929122	ncRNA	21.76	4.85	4.486597938	5.54E-07
chr6-1252	chr6	160693818	160694818	+	16	1000	Intergenic	Intergenic	-14355	NM_003058	6582	Hs.436385	NM_003058	ENSG00000112499	SLC22A2	2-Oct	solute carrier family 22 member 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-1254	chr6	160752991	160755372	+	42.2	2381	Intergenic	Intergenic	-15224	NM_021977	6581	Hs.567337	NM_021977	ENSG00000146477	SLC22A3	EMT|EMTH|OCT3	solute carrier family 22 member 3	protein-coding	42.25	4.37	9.66819222	1.64E-21
chr6-1263	chr6	167550019	167551019	+	17.3	1000	"exon (NM_031409, exon 3 of 3)"	"exon (NM_031409, exon 3 of 3)"	14278	NM_031409	1235	Hs.46468	NM_004367	ENSG00000112486	CCR6	BN-1|C-C CKR-6|CC-CKR-6|CCR-6|CD196|CKR-L3|CKRL3|CMKBR6|DCR2|DRY6|GPR29|GPRCY4|STRL22	C-C motif chemokine receptor 6	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr6-1264	chr6	167663818	167665093	+	20.5	1275	Intergenic	LTR90B|LTR|LTR	-40348	NM_001143947	54346	Hs.567508	NM_018974	ENSG00000112494	UNC93A	Unc-93A|dJ366N23.1|dJ366N23.2	unc-93 homolog A (C. elegans)	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr6-1266	chr6	168081270	168082270	+	16.6	1000	"non-coding (NR_117092, exon 4 of 4)"	"non-coding (NR_117092, exon 4 of 4)"	-1867	NR_117091	401286	Hs.487182	NR_117091	ENSG00000272549	LOC401286	-	uncharacterized LOC401286	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr6-1268	chr6	168469274	168473016	+	46.1	3742	"intron (NR_110312, intron 3 of 15)"	MLT2D|LTR|ERVL	5401	NM_001122841	79981	Hs.266746	NM_024919	ENSG00000153303	FRMD1	bA164L23.1	FERM domain containing 1	protein-coding	46.09	7.77	5.931788932	1.14E-16
chr6-1269	chr6	168557912	168559531	+	28.2	1619	Intergenic	Intergenic	68476	NR_134590	105378137	Hs.549668	NR_134590	ENSG00000237987	LOC105378137	-	uncharacterized LOC105378137	ncRNA	28.16	3.4	8.282352941	1.50E-13
chr6-1272	chr6	168666083	168667083	+	17.3	1000	Intergenic	Intergenic	22965	NR_110870	101929420	Hs.571211	NR_110870	ENSG00000234647	LOC101929420	-	uncharacterized LOC101929420	ncRNA	17.28	1.94	8.907216495	8.87E-09
chr6-1274	chr6	168894939	168895939	+	17.3	1000	"intron (NM_001166412, intron 1 of 12)"	"intron (NM_001166412, intron 1 of 12)"	53608	NM_001166412	64094	Hs.487200	NM_022138	ENSG00000112562	SMOC2	DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1	SPARC related modular calcium binding 2	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr6-1275	chr6	168912529	168913529	+	16.6	1000	"intron (NM_001166412, intron 2 of 12)"	"intron (NM_001166412, intron 2 of 12)"	71198	NM_001166412	64094	Hs.487200	NM_022138	ENSG00000112562	SMOC2	DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1	SPARC related modular calcium binding 2	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr6-1278	chr6	169291307	169292307	+	16.6	1000	Intergenic	AluJo|SINE|Alu	72670	NR_136248	105378146	Hs.343631	NR_136248		LOC105378146	-	uncharacterized LOC105378146	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr6-1279	chr6	169350288	169351568	+	21.8	1280	"intron (NR_136250, intron 3 of 3)"	"intron (NR_136250, intron 3 of 3)"	13549	NR_136248	105378146	Hs.343631	NR_136248		LOC105378146	-	uncharacterized LOC105378146	ncRNA	21.76	4.85	4.486597938	5.54E-07
chr6-1283	chr6	170213579	170214579	+	15.4	1000	Intergenic	Intergenic	-15158	NR_026781	401288	Hs.556095	NM_207502	ENSG00000229214	LINC00242	C6orf122|NCRNA00242|dJ266L20.5	long intergenic non-protein coding RNA 242	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr6-1285	chr6	170504542	170505542	+	16	1000	Intergenic	Intergenic	29176	NR_125878	102724511	Hs.550045	NR_125878		LOC102724511	-	uncharacterized LOC102724511	ncRNA	16	2.91	5.498281787	4.98E-06
chr6-1287	chr6	210963	212244	+	19.2	1281	Intergenic	Intergenic	-6119	NR_126020	285766	Hs.657946	NR_126020	ENSG00000263667	LOC285766	-	uncharacterized LOC285766	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr6-1306	chr6	965243	969783	+	55.7	4540	"intron (NR_027116, intron 2 of 3)"	"intron (NR_027116, intron 2 of 3)"	99015	NR_110853	101927691	Hs.552556	NR_110853		LOC101927691	-	uncharacterized LOC101927691	ncRNA	55.69	11.65	4.780257511	4.03E-16
chr6-1309	chr6	1044201	1045201	+	15.4	1000	"intron (NR_027116, intron 1 of 3)"	"intron (NR_027116, intron 1 of 3)"	56866	NR_027116	285768	Hs.209463	NR_027115		LINC01622	-	long intergenic non-protein coding RNA 1622	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr6-131	chr6	52083326	52084963	+	35.2	1637	Intergenic	MSTC-int|LTR|ERVL-MaLR	25154	NM_052872	112744	Hs.272295	NM_052872	ENSG00000112116	IL17F	CANDF6|IL-17F|ML-1|ML1	interleukin 17F	protein-coding	35.2	5.82	6.048109966	6.75E-13
chr6-1312	chr6	1216044	1218401	+	33.9	2357	Intergenic	AT_rich|Low_complexity|Low_complexity	-95453	NM_033260	94234	Hs.591352	NM_033260	ENSG00000164379	FOXQ1	HFH1	forkhead box Q1	protein-coding	33.92	6.8	4.988235294	1.08E-10
chr6-1313	chr6	1323082	1324516	+	25	1434	Intergenic	Intergenic	11124	NM_033260	94234	Hs.591352	NM_033260	ENSG00000164379	FOXQ1	HFH1	forkhead box Q1	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr6-1316	chr6	1392449	1396206	+	71.7	3757	"intron (NM_001452, intron 1 of 1)"	"intron (NM_001452, intron 1 of 1)"	-3681	NR_106778	102466720		NR_106778	ENSG00000275859	MIR6720	hsa-mir-6720|mir-6720	microRNA 6720	ncRNA	71.69	7.77	9.226512227	2.55E-34
chr6-132	chr6	70576469	70578396	+	39.7	1927	"intron (NM_001858, intron 1 of 50)"	CpG	984	NM_001858	1310	Hs.444842	NM_001858	ENSG00000082293	COL19A1	COL9A1L|D6S228E	collagen type XIX alpha 1 chain	protein-coding	39.69	1.94	20.45876289	1.13E-29
chr6-1322	chr6	1506648	1507648	+	16	1000	Intergenic	AluSq|SINE|Alu	-98618	NR_125804	101927703	Hs.607964	NR_125804		FOXCUT	LINC01379|TCONS_00011636	FOXC1 upstream transcript (non-protein coding)	ncRNA	16	2.91	5.498281787	4.98E-06
chr6-1323	chr6	1511736	1512736	+	16.6	1000	Intergenic	L1PB2|LINE|L1	-93530	NR_125804	101927703	Hs.607964	NR_125804		FOXCUT	LINC01379|TCONS_00011636	FOXC1 upstream transcript (non-protein coding)	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr6-1324	chr6	1538600	1539600	+	16	1000	Intergenic	Intergenic	-66666	NR_125804	101927703	Hs.607964	NR_125804		FOXCUT	LINC01379|TCONS_00011636	FOXC1 upstream transcript (non-protein coding)	ncRNA	16	3.88	4.12371134	7.91E-05
chr6-1325	chr6	1581078	1582078	+	14.1	1000	Intergenic	Intergenic	-24188	NR_125804	101927703	Hs.607964	NR_125804		FOXCUT	LINC01379|TCONS_00011636	FOXC1 upstream transcript (non-protein coding)	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr6-1327	chr6	1605179	1609768	+	77.4	4589	"non-coding (NR_125804, exon 2 of 2)"	"non-coding (NR_125804, exon 2 of 2)"	1707	NR_125804	101927703	Hs.607964	NR_125804		FOXCUT	LINC01379|TCONS_00011636	FOXC1 upstream transcript (non-protein coding)	ncRNA	77.45	11.16	6.939964158	6.20E-30
chr6-1332	chr6	2956968	2958280	+	23	1312	"intron (NM_001271825, intron 2 of 6)"	MLT1B-int|LTR|ERVL-MaLR	4780	NM_001271825	5269	Hs.519523	NM_004568	ENSG00000124570	SERPINB6	CAP|DFNB91|MSTP057|PI-6|PI6|PTI|SPI3	serpin family B member 6	protein-coding	23.04	4.37	5.272311213	2.46E-08
chr6-1338	chr6	3766826	3767826	+	16.6	1000	Intergenic	Intergenic	-15080	NM_183373	221749	Hs.484500	NM_183373	ENSG00000168994	PXDC1	C6orf145	PX domain containing 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr6-1340	chr6	3817910	3818910	+	15.4	1000	Intergenic	MLT1H|LTR|ERVL-MaLR	-31190	NM_012135	26240	Hs.140944	NM_012135	ENSG00000145945	FAM50B	D6S2654E|X5L	family with sequence similarity 50 member B	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr6-1342	chr6	3841604	3842977	+	19.8	1373	Intergenic	Intergenic	-7310	NM_012135	26240	Hs.140944	NM_012135	ENSG00000145945	FAM50B	D6S2654E|X5L	family with sequence similarity 50 member B	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr6-1343	chr6	3900814	3902159	+	19.8	1345	Intergenic	Intergenic	51886	NM_012135	26240	Hs.140944	NM_012135	ENSG00000145945	FAM50B	D6S2654E|X5L	family with sequence similarity 50 member B	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr6-1346	chr6	4399701	4400701	+	14.1	1000	Intergenic	Intergenic	-28035	NR_106988	102465753		NR_106988	ENSG00000280494	MIR7641-2	B-ATF|hsa-mir-7641-2	microRNA 7641-2	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr6-1347	chr6	4463524	4464524	+	16	1000	Intergenic	Intergenic	35788	NR_106988	102465753		NR_106988	ENSG00000280494	MIR7641-2	B-ATF|hsa-mir-7641-2	microRNA 7641-2	ncRNA	16	0.97	16.49484536	3.54E-11
chr6-135	chr6	144293805	144295626	+	34.6	1821	"intron (NM_001080955, intron 1 of 5)"	"intron (NM_001080955, intron 1 of 5)"	-8100	NM_001317158	5325	Hs.743225	NM_002656	ENSG00000118495	PLAGL1	LOT1|ZAC|ZAC1	PLAG1 like zinc finger 1	protein-coding	34.56	4.37	7.908466819	8.51E-16
chr6-1351	chr6	4970533	4972671	+	30.7	2138	Intergenic	MLT1B|LTR|ERVL-MaLR	-32448	NR_126016	100129461	Hs.131700	NR_126015	ENSG00000272142	LYRM4-AS1	-	LYRM4 antisense RNA 1	ncRNA	30.72	6.31	4.868462758	6.13E-10
chr6-1352	chr6	6587712	6588712	+	14.7	1000	promoter-TSS (NM_004271)	promoter-TSS (NM_004271)	-722	NM_004271	9450	Hs.653138	NM_004271	ENSG00000112799	LY86	MD-1|MD1|MMD-1|dJ80N2.1	lymphocyte antigen 86	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr6-1354	chr6	6679838	6680838	+	16.6	1000	Intergenic	Intergenic	-57279	NR_026970	285780	Hs.655737	NM_173675	ENSG00000216863	LY86-AS1	LY86-AS|LY86AS	LY86 antisense RNA 1	ncRNA	16.64	1.46	11.39726027	2.99E-10
chr6-1355	chr6	6731780	6732780	+	16.6	1000	Intergenic	L1MC1|LINE|L1	-109221	NR_026970	285780	Hs.655737	NM_173675	ENSG00000216863	LY86-AS1	LY86-AS|LY86AS	LY86 antisense RNA 1	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr6-1356	chr6	6748169	6749702	+	20.5	1533	Intergenic	Intergenic	-125876	NR_026970	285780	Hs.655737	NM_173675	ENSG00000216863	LY86-AS1	LY86-AS|LY86AS	LY86 antisense RNA 1	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr6-1357	chr6	6902314	6903314	+	16	1000	Intergenic	Intergenic	-205016	NM_001168344	6239	Hs.298248	NM_002955	ENSG00000124782	RREB1	FINB|HNT|LZ321|RREB-1|Zep-1	ras responsive element binding protein 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr6-1360	chr6	7764349	7765349	+	16	1000	"intron (NM_001718, intron 1 of 6)"	"intron (NM_001718, intron 1 of 6)"	38517	NM_001718	654	Hs.285671	NM_001718	ENSG00000153162	BMP6	VGR|VGR1	bone morphogenetic protein 6	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-1363	chr6	11730996	11731996	+	16	1000	"intron (NM_032744, intron 4 of 5)"	"intron (NM_032744, intron 4 of 5)"	47784	NM_001143948	84830	Hs.126409	NM_032744	ENSG00000111863	ADTRP	AIG1L|C6orf105|dJ413H6.1	androgen dependent TFPI regulating protein	protein-coding	16	2.43	6.58436214	7.90E-07
chr6-1364	chr6	12291528	12292528	+	15.4	1000	"intron (NM_001168319, intron 1 of 4)"	"intron (NM_001168319, intron 1 of 4)"	1499	NM_001955	1906	Hs.511899	NM_001955	ENSG00000078401	EDN1	ARCND3|ET1|HDLCQ7|PPET1|QME	endothelin 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr6-1365	chr6	13105789	13106789	+	15.4	1000	"intron (NM_001322314, intron 2 of 12)"	LTR56|LTR|ERV1	92401	NM_001322314	221692	Hs.436996	NM_030948	ENSG00000112137	PHACTR1	RPEL|RPEL1|dJ257A7.2	phosphatase and actin regulator 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr6-1366	chr6	13214159	13215159	+	15.4	1000	"intron (NM_001322314, intron 6 of 12)"	"intron (NM_001322314, intron 6 of 12)"	69015	NR_134859	100130357	Hs.484678	NM_001242698		LOC100130357	-	uncharacterized LOC100130357	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr6-1372	chr6	13537358	13538358	+	14.7	1000	Intergenic	Intergenic	-36903	NM_001193267	23408	Hs.567431	NM_012241	ENSG00000124523	SIRT5	SIR2L5	sirtuin 5	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr6-1374	chr6	13922345	13926361	+	68.5	4016	promoter-TSS (NM_001165034)	promoter-TSS (NM_001165034)	-324	NM_001165034	221687	Hs.111164	NM_152737	ENSG00000180537	RNF182	-	ring finger protein 182	protein-coding	68.49	11.16	6.137096774	3.21E-24
chr6-1376	chr6	13998887	14000157	+	18.6	1270	Intergenic	Intergenic	74098	NM_001165033	221687	Hs.111164	NM_152737	ENSG00000180537	RNF182	-	ring finger protein 182	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr6-1378	chr6	14034165	14038610	+	69.8	4445	Intergenic	Intergenic	-81100	NM_001251901	9308	Hs.595133	NM_004233	ENSG00000112149	CD83	BL11|HB15	CD83 molecule	protein-coding	69.77	11.65	5.988841202	3.55E-24
chr6-1380	chr6	14056974	14057974	+	14.1	1000	Intergenic	AluSx|SINE|Alu	-60013	NM_001251901	9308	Hs.595133	NM_004233	ENSG00000112149	CD83	BL11|HB15	CD83 molecule	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr6-1385	chr6	16762473	16763473	+	16.6	1000	"non-coding (NR_136240, exon 3 of 3)"	"non-coding (NR_136240, exon 3 of 3)"	-1252	NM_000332	6310	Hs.434961	NM_000332	ENSG00000124788	ATXN1	ATX1|D6S504E|SCA1	ataxin 1	protein-coding	16.64	0	17.14115603	3.68E-16
chr6-1388	chr6	21664012	21666740	+	75.5	2728	Intergenic	Intergenic	-1299	NR_015410	401237	Hs.712707	NR_015410	ENSG00000272168	CASC15	LINC00340	cancer susceptibility candidate 15 (non-protein coding)	ncRNA	75.53	5.82	12.97766323	5.47E-44
chr6-1390	chr6	33486592	33487592	+	16.6	1000	Intergenic	Intergenic	60978	NM_001188	578	Hs.485139	NM_001188	ENSG00000030110	BAK1	BAK|BAK-LIKE|BCL2L7|CDN1	BCL2 antagonist/killer 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr6-1393	chr6	33762572	33763572	+	16.6	1000	"intron (NM_001184698, intron 4 of 4)"	"intron (NM_001184698, intron 4 of 4)"	-6166	NM_181336	221496	Hs.444845	NM_181336	ENSG00000161904	LEMD2	CTRCT42|NET25|dJ482C21.1	LEM domain containing 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr6-1395	chr6	33859020	33860020	+	14.7	1000	"non-coding (NR_038989, exon 3 of 3)"	"non-coding (NR_038989, exon 3 of 3)"	5164	NR_038989	100507584	Hs.547104	NR_038989	ENSG00000249346	LINC01016	-	long intergenic non-protein coding RNA 1016	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr6-1396	chr6	33942591	33945243	+	40.3	2652	Intergenic	CpG	23911	NR_031681	100302123		NR_031681	ENSG00000221697	MIR1275	MIRN1275|hsa-mir-1275|mir-1275	microRNA 1275	ncRNA	40.33	2.43	16.59670782	7.94E-27
chr6-1400	chr6	34046634	34047634	+	16	1000	"intron (NM_001282847, intron 2 of 9)"	"intron (NM_001282847, intron 2 of 9)"	26625	NM_001256813	2914	Hs.429018	NM_000841	ENSG00000124493	GRM4	GPRC1D|MGLUR4|mGlu4	glutamate metabotropic receptor 4	protein-coding	16	2.43	6.58436214	7.90E-07
chr6-1407	chr6	34507099	34508099	+	15.4	1000	"intron (NM_012391, intron 3 of 5)"	"intron (NM_012391, intron 3 of 5)"	16511	NM_012391	25803	Hs.485158	NM_012391	ENSG00000124664	SPDEF	PDEF|bA375E1.3	SAM pointed domain containing ETS transcription factor	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr6-1411	chr6	36236424	36237424	+	16	1000	"intron (NM_001145716, intron 1 of 7)"	"intron (NM_001145716, intron 1 of 7)"	-1313	NM_001145717	285848	Hs.407002	NM_173676	ENSG00000180316	PNPLA1	ARCI10|dJ50J22.1	patatin like phospholipase domain containing 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr6-1413	chr6	36614991	36615991	+	16	1000	Intergenic	Intergenic	-25202	NR_037491	100500885		NR_037491	ENSG00000263894	MIR3925	-	microRNA 3925	ncRNA	16	3.88	4.12371134	7.91E-05
chr6-1415	chr6	36806848	36808596	+	28.2	1748	promoter-TSS (NM_020939)	promoter-TSS (NM_020939)	-502	NM_001314017	57699	Hs.657869	NM_020939	ENSG00000124772	CPNE5	COPN5|CPN5	copine 5	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr6-1419	chr6	37554915	37555915	+	16.6	1000	Intergenic	Intergenic	-32217	NR_039669	100616413		NR_039669	ENSG00000263926	MIR4462	-	microRNA 4462	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr6-142	chr6	301649	302649	+	21.8	1000	"intron (NR_104475, intron 1 of 3)"	"intron (NR_104475, intron 1 of 3)"	10092	NM_001286555	56940	Hs.29106	NM_020185	ENSG00000112679	DUSP22	JKAP|JSP-1|JSP1|LMW-DSP2|LMWDSP2|MKP-x|MKPX|VHX	dual specificity phosphatase 22	protein-coding	21.76	3.4	6.4	3.73E-09
chr6-1420	chr6	37591438	37594036	+	48	2598	Intergenic	Intergenic	-69539	NR_039669	100616413		NR_039669	ENSG00000263926	MIR4462	-	microRNA 4462	ncRNA	48.01	7.28	6.59478022	2.47E-18
chr6-1421	chr6	37662139	37667134	+	83.9	4995	"5' UTR (NM_153487, exon 1 of 17)"	"5' UTR (NM_153487, exon 1 of 17)"	1130	NM_153487	266727	Hs.437993	NM_153487	ENSG00000112139	MDGA1	GPIM|MAMDC3	MAM domain containing glycosylphosphatidylinositol anchor 1	protein-coding	83.85	16.02	5.234082397	1.17E-25
chr6-1422	chr6	38821348	38822348	+	14.7	1000	"intron (NM_001206927, intron 41 of 92)"	"intron (NM_001206927, intron 41 of 92)"	99035	NR_038401	100131047	Hs.670957	NR_038401		LOC100131047	-	uncharacterized LOC100131047	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr6-1424	chr6	39265735	39266735	+	16.6	1000	TTS (NM_001135111)	TTS (NM_001135111)	16001	NM_031460	89822	Hs.162282	NM_031460	ENSG00000124780	KCNK17	K2p17.1|TALK-2|TALK2|TASK-4|TASK4	potassium two pore domain channel subfamily K member 17	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr6-1426	chr6	40129400	40130400	+	16.6	1000	Intergenic	Intergenic	193845	NR_038887	401260	Hs.654837	NM_001001705		LINC00951	-	long intergenic non-protein coding RNA 951	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr6-1428	chr6	40306584	40307855	+	19.2	1271	Intergenic	MLT1N2|LTR|ERVL-MaLR	16526	NR_038887	401260	Hs.654837	NM_001001705		LINC00951	-	long intergenic non-protein coding RNA 951	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr6-143	chr6	359070	360070	+	23	1000	Intergenic	Intergenic	-32169	NR_046000	3662	Hs.401013	NM_002460	ENSG00000137265	IRF4	LSIRF|MUM1|NF-EM5|SHEP8	interferon regulatory factor 4	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr6-1433	chr6	40855617	40856985	+	20.5	1368	"intron (NR_110873, intron 3 of 5)"	MLT1J2|LTR|ERVL-MaLR	134718	NR_110873	101929555	Hs.552555	NR_110873		LOC101929555	-	uncharacterized LOC101929555	ncRNA	20.48	3.4	6.023529412	2.41E-08
chr6-1434	chr6	40957823	40959244	+	21.8	1421	"intron (NR_110873, intron 1 of 5)"	L2|LINE|L2	32486	NR_110873	101929555	Hs.552555	NR_110873		LOC101929555	-	uncharacterized LOC101929555	ncRNA	21.76	2.91	7.47766323	3.87E-10
chr6-1440	chr6	41599950	41600950	+	16	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	-4465	NM_001300804	4188	Hs.520119	NM_005586	ENSG00000112559	MDFI	I-MF|I-mfa	MyoD family inhibitor	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-1441	chr6	41603989	41609318	+	82.6	5329	"intron (NM_001300805, intron 2 of 3)"	CpG-22128	458	NM_001300805	4188	Hs.520119	NM_005586	ENSG00000112559	MDFI	I-MF|I-mfa	MyoD family inhibitor	protein-coding	82.57	13.59	6.075791023	1.06E-28
chr6-1443	chr6	43475114	43478504	+	50.6	3390	"intron (NM_001271882, intron 1 of 5)"	"intron (NM_001271882, intron 1 of 5)"	1272	NM_001012974	221424	Hs.445552	NM_001012974	ENSG00000204052	LRRC73	C6orf154	leucine rich repeat containing 73	protein-coding	50.57	6.31	8.014263074	4.21E-22
chr6-1446	chr6	43823950	43824950	+	16.6	1000	Intergenic	Intergenic	-34315	NR_024478	100132354	Hs.376232	NR_024478		LINC01512	HI-LNC77	long intergenic non-protein coding RNA 1512	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr6-145	chr6	362207	363207	+	23.7	1000	Intergenic	Intergenic	-29032	NR_046000	3662	Hs.401013	NM_002460	ENSG00000137265	IRF4	LSIRF|MUM1|NF-EM5|SHEP8	interferon regulatory factor 4	protein-coding	23.68	5.82	4.068728522	1.51E-06
chr6-1450	chr6	44244682	44245682	+	15.4	1000	"3' UTR (NM_001137560, exon 3 of 3)"	"3' UTR (NM_001137560, exon 3 of 3)"	6702	NM_001137560	441151	Hs.632851	NM_001039704	ENSG00000178233	TMEM151B	C6orf137|TMEM193|bA444E17.5	transmembrane protein 151B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-1452	chr6	44282758	44283758	+	16	1000	Intergenic	Intergenic	-2195	NM_020745	57505	Hs.158381	NM_020745	ENSG00000124608	AARS2	AARSL|COXPD8|LKENP|MT-ALARS|MTALARS	"alanyl-tRNA synthetase 2, mitochondrial"	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-146	chr6	3911587	3913602	+	39	2015	Intergenic	Intergenic	62994	NM_012135	26240	Hs.140944	NM_012135	ENSG00000145945	FAM50B	D6S2654E|X5L	family with sequence similarity 50 member B	protein-coding	39.04	7.77	5.024453024	3.34E-12
chr6-1463	chr6	45654718	45655718	+	16.6	1000	Intergenic	Intergenic	250116	NR_045674	53405	Hs.485489	NM_016929	ENSG00000112782	CLIC5	DFNB102|DFNB103|MST130|MSTP130	chloride intracellular channel 5	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr6-1464	chr6	45671283	45672283	+	15.4	1000	Intergenic	Intergenic	233551	NR_045674	53405	Hs.485489	NM_016929	ENSG00000112782	CLIC5	DFNB102|DFNB103|MST130|MSTP130	chloride intracellular channel 5	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr6-1465	chr6	45847549	45849124	+	26.2	1575	Intergenic	Intergenic	56998	NR_045674	53405	Hs.485489	NM_016929	ENSG00000112782	CLIC5	DFNB102|DFNB103|MST130|MSTP130	chloride intracellular channel 5	protein-coding	26.24	1.94	13.5257732	4.03E-16
chr6-1471	chr6	46867552	46868552	+	16.6	1000	"intron (NM_001098518, intron 2 of 20)"	"intron (NM_001098518, intron 2 of 20)"	-3156	NR_110658	101926962	Hs.680113	NR_110658		LOC101926962	-	uncharacterized LOC101926962	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr6-1472	chr6	46972513	46973513	+	15.4	1000	"intron (NM_153840, intron 13 of 14)"	"intron (NM_153840, intron 13 of 14)"	37086	NM_025048	266977	Hs.733762	NM_025048	ENSG00000153292	ADGRF1	GPR110|KPG_012|PGR19|hGPCR36	adhesion G protein-coupled receptor F1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr6-1474	chr6	47674907	47675907	+	16.6	1000	"intron (NM_153838, intron 2 of 9)"	MIR3|SINE|MIR	9126	NM_001347855	221393	Hs.150131	NM_153838	ENSG00000153294	ADGRF4	GPR115|PGR18	adhesion G protein-coupled receptor F4	protein-coding	16.64	0.49	33.95918367	3.68E-16
chr6-1475	chr6	47811181	47812181	+	16	1000	Intergenic	L2a|LINE|L2	56877	NR_033806	221391	Hs.213717	NM_181744	ENSG00000124818	OPN5	GPR136|GRP136|PGR12|TMEM13	opsin 5	protein-coding	16	1.94	8.24742268	7.67E-08
chr6-1477	chr6	51706419	51707419	+	14.7	1000	"intron (NM_170724, intron 50 of 60)"	"intron (NM_170724, intron 50 of 60)"	220251	NR_125840	101927082	Hs.730296	NR_125840		LOC101927082	-	uncharacterized LOC101927082	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr6-1478	chr6	51918188	51919188	+	16.6	1000	"intron (NM_170724, intron 20 of 60)"	"intron (NM_170724, intron 20 of 60)"	33735	NM_170724	5314	Hs.662050	NM_138694	ENSG00000170927	PKHD1	ARPKD|FCYT|TIGM1	polycystic kidney and hepatic disease 1 (autosomal recessive)	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr6-1480	chr6	52010286	52011537	+	18.6	1251	TTS (NR_131248)	TTS (NR_131248)	1764	NR_029713	406989		NR_029713	ENSG00000207604	MIR206	MIRN206|miRNA206|mir-206	microRNA 206	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr6-1484	chr6	52831662	52832662	+	16.6	1000	Intergenic	AluSg7|SINE|Alu	28016	NM_001512	2941	Hs.485557	NM_001512	ENSG00000170899	GSTA4	GSTA4-4|GTA4	glutathione S-transferase alpha 4	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr6-1491	chr6	71946700	71947700	+	16.6	1000	Intergenic	Intergenic	-50945	NM_024576	79627	Hs.648434	NM_024576	ENSG00000119900	OGFRL1	dJ331H24.1	opioid growth factor receptor like 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr6-1494	chr6	76200221	76201221	+	16.6	1000	"intron (NR_110608, intron 1 of 1)"	"intron (NR_110608, intron 1 of 1)"	2909	NR_110608	27145	Hs.201488	NM_015687	ENSG00000118407	FILIP1	FILIP	filamin A interacting protein 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr6-1495	chr6	76210711	76211711	+	14.7	1000	Intergenic	AluSx|SINE|Alu	-7581	NM_001300866	27145	Hs.201488	NM_015687	ENSG00000118407	FILIP1	FILIP	filamin A interacting protein 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr6-1496	chr6	80327478	80329920	+	32	2442	Intergenic	Intergenic	-12123	NM_031469	83699	Hs.302772	NM_031469	ENSG00000198478	SH3BGRL2	-	SH3 domain binding glutamate rich protein like 2	protein-coding	32	5.82	5.498281787	2.32E-11
chr6-1498	chr6	80339150	80341713	+	45.4	2563	promoter-TSS (NM_031469)	promoter-TSS (NM_031469)	-391	NM_031469	83699	Hs.302772	NM_031469	ENSG00000198478	SH3BGRL2	-	SH3 domain binding glutamate rich protein like 2	protein-coding	45.45	9.22	4.929501085	9.30E-14
chr6-1499	chr6	83073427	83075494	+	35.8	2067	"5' UTR (NM_006670, exon 3 of 3)"	"5' UTR (NM_006670, exon 3 of 3)"	499	NM_001166392	7162	Hs.71947	NM_006670	ENSG00000146242	TPBG	5T4|5T4AG|M6P1|WAIF1	trophoblast glycoprotein	protein-coding	35.84	4.85	7.389690722	1.37E-15
chr6-150	chr6	16758664	16760792	+	39.7	2128	"intron (NM_000332, intron 1 of 8)"	"intron (NM_000332, intron 1 of 8)"	-1641	NR_136240	101928433	Hs.408455	NR_136240		LOC101928433	-	uncharacterized LOC101928433	ncRNA	39.69	8.25	4.810909091	2.95E-12
chr6-1501	chr6	88558508	88559508	+	15.4	1000	"intron (NR_110869, intron 2 of 4)"	"intron (NR_110869, intron 2 of 4)"	64430	NR_110869	101928911	Hs.571178	NR_110869		LOC101928911	-	uncharacterized LOC101928911	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr6-1502	chr6	88810872	88811872	+	16.6	1000	Intergenic	Intergenic	43684	NM_033181	1268	Hs.75110	NM_016083	ENSG00000118432	CNR1	CANN6|CB-R|CB1|CB1A|CB1K5|CB1R|CNR	cannabinoid receptor 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr6-1509	chr6	91391143	91392143	+	16	1000	Intergenic	Intergenic	-94623	NM_003188	6885	Hs.594838	NM_003188	ENSG00000135341	MAP3K7	CSCF|FMD2|MEKK7|TAK1|TGF1a	mitogen-activated protein kinase kinase kinase 7	protein-coding	16	0	16.4818808	1.26E-14
chr6-1512	chr6	99291983	99292983	+	16.6	1000	Intergenic	Intergenic	9903	NM_005604	5454	Hs.182505	NM_005604	ENSG00000184486	POU3F2	BRN2|N-Oct3|OCT7|OTF-7|OTF7|POUF3|brn-2|oct-7	POU class 3 homeobox 2	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr6-1515	chr6	100281847	100282847	+	16.6	1000	Intergenic	Intergenic	-159567	NR_038384	728012	Hs.434366	NR_038384	ENSG00000229315	MCHR2-AS1	-	MCHR2 antisense RNA 1	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr6-1516	chr6	101719732	101720732	+	16.6	1000	Intergenic	AluSg|SINE|Alu	-126629	NM_175768	2898	Hs.98262	NM_021956	ENSG00000164418	GRIK2	EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6	glutamate ionotropic receptor kainate type subunit 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr6-1524	chr6	106817127	106818430	+	19.8	1303	Intergenic	MIR|SINE|MIR	-44083	NM_001286111	9474	Hs.486063	NM_004849	ENSG00000057663	ATG5	APG5|APG5-LIKE|APG5L|ASP|hAPG5	autophagy related 5	protein-coding	19.84	1.46	13.5890411	1.82E-12
chr6-1530	chr6	108138581	108140334	+	26.9	1753	"intron (NM_198081, intron 1 of 7)"	"intron (NM_198081, intron 1 of 7)"	6064	NM_001286408	256380	Hs.486109	NM_198081	ENSG00000146285	SCML4	dJ47M23.1	sex comb on midleg-like 4 (Drosophila)	protein-coding	26.88	3.88	6.927835052	1.44E-11
chr6-1541	chr6	112576247	112577247	+	16.6	1000	promoter-TSS (NM_002290)	promoter-TSS (NM_002290)	-830	NM_001105209	3910	Hs.654572	NM_002290	ENSG00000112769	LAMA4	CMD1JJ|LAMA3|LAMA4*-1	laminin subunit alpha 4	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr6-1542	chr6	114177159	114180255	+	53.8	3096	"5' UTR (NM_002356, exon 1 of 2)"	"5' UTR (NM_002356, exon 1 of 2)"	193	NM_002356	4082	Hs.519909	NM_002356	ENSG00000277443	MARCKS	80K-L|MACS|PKCSL|PRKCSL	myristoylated alanine rich protein kinase C substrate	protein-coding	53.77	7.77	6.92020592	1.47E-21
chr6-1543	chr6	119458271	119459271	+	14.7	1000	"intron (NM_001100411, intron 1 of 16)"	"intron (NM_001100411, intron 1 of 16)"	11587	NM_001288576	79632	Hs.443789	NM_024581	ENSG00000111879	FAM184A	C6orf60	family with sequence similarity 184 member A	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr6-1544	chr6	121758040	121759436	+	18.6	1396	"intron (NM_000165, intron 1 of 1)"	"intron (NM_000165, intron 1 of 1)"	2015	NM_000165	2697	Hs.74471	NM_000165	ENSG00000152661	GJA1	AVSD3|CMDR|CX43|EKVP|GJAL|HLHS1|HSS|ODDD|PPKCA	gap junction protein alpha 1	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr6-1546	chr6	125636264	125637526	+	19.8	1262	Intergenic	Intergenic	-13613	NM_016063	51020	Hs.32826	NM_016063	ENSG00000111906	HDDC2	C6orf74|CGI-130|NS5ATP2|dJ167O5.2	HD domain containing 2	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr6-1555	chr6	134212124	134213124	+	16	1000	"intron (NM_003206, intron 1 of 1)"	(CCA)n|Simple_repeat|Simple_repeat	2364	NM_003206	6943	Hs.78061	NM_003206	ENSG00000118526	TCF21	POD1|bHLHa23	transcription factor 21	protein-coding	16	1.94	8.24742268	7.67E-08
chr6-1558	chr6	134854384	134855384	+	16	1000	"intron (NR_125856, intron 1 of 2)"	ERVL-E-int|LTR|ERVL	6259	NR_125856	101928304	Hs.555076	NR_125855		LOC101928304	-	uncharacterized LOC101928304	ncRNA	16	3.4	4.705882353	2.25E-05
chr6-1562	chr6	136172150	136173150	+	16	1000	promoter-TSS (NM_018945)	promoter-TSS (NM_018945)	-184	NM_018945	27115	Hs.744230	NM_018945	ENSG00000171408	PDE7B	bA472E5.1	phosphodiesterase 7B	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-1564	chr6	136673976	136674976	+	16	1000	"intron (NM_001198618, intron 16 of 17)"	"intron (NM_001198618, intron 16 of 17)"	-63487	NM_001077441	9774	Hs.486542	NM_014739	ENSG00000029363	BCLAF1	BTF|bK211L9.1	BCL2 associated transcription factor 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-1565	chr6	136705261	136706261	+	17.9	1000	"intron (NM_001198617, intron 3 of 15)"	AluJr|SINE|Alu	82252	NM_001198615	9053	Hs.486548	NM_003980	ENSG00000135525	MAP7	E-MAP-115|EMAP115	microtubule associated protein 7	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr6-1576	chr6	138582696	138584484	+	25.6	1788	"intron (NM_020340, intron 11 of 33)"	AluSz|SINE|Alu	-43963	NM_021635	59351	Hs.302016	NM_021635	ENSG00000254440	PBOV1	UC28|UROC28|dJ171N11.2	prostate and breast cancer overexpressed 1	protein-coding	25.6	5.34	4.794007491	2.00E-08
chr6-1577	chr6	138589464	138590464	+	16.6	1000	"intron (NM_020340, intron 12 of 33)"	"intron (NM_020340, intron 12 of 33)"	-50337	NM_021635	59351	Hs.302016	NM_021635	ENSG00000254440	PBOV1	UC28|UROC28|dJ171N11.2	prostate and breast cancer overexpressed 1	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr6-1579	chr6	138888472	138889472	+	16	1000	"intron (NM_020464, intron 1 of 6)"	"intron (NM_020464, intron 1 of 6)"	4696	NM_020464	57224	Hs.652741	NM_020464	ENSG00000135540	NHSL1	C6orf63	NHS like 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-1582	chr6	139708851	139709851	+	16.6	1000	Intergenic	AluSc8|SINE|Alu	-13564	NM_006079	10370	Hs.82071	NM_006079	ENSG00000164442	CITED2	ASD8|MRG-1|MRG1|P35SRJ|VSD2	Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr6-1583	chr6	144097126	144098126	+	16	1000	"intron (NM_001100165, intron 7 of 11)"	"intron (NM_001100165, intron 7 of 11)"	-66784	NM_001329953	84946	Hs.185675	NM_032860	ENSG00000135521	LTV1	C6orf93|dJ468K18.4	LTV1 ribosome biogenesis factor	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-1584	chr6	144271910	144273569	+	23	1659	"intron (NM_001289047, intron 2 of 3)"	"intron (NM_001289047, intron 2 of 3)"	9808	NM_001317157	5325	Hs.743225	NM_002656	ENSG00000118495	PLAGL1	LOT1|ZAC|ZAC1	PLAG1 like zinc finger 1	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr6-1586	chr6	144286478	144287478	+	16	1000	promoter-TSS (NM_001317156)	promoter-TSS (NM_001317156)	-363	NM_001317158	5325	Hs.743225	NM_002656	ENSG00000118495	PLAGL1	LOT1|ZAC|ZAC1	PLAG1 like zinc finger 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-1588	chr6	147879013	147880013	+	14.7	1000	"intron (NM_001030060, intron 1 of 1)"	"intron (NM_001030060, intron 1 of 1)"	49685	NM_001030060	389432	Hs.567973	NM_001030060	ENSG00000203727	SAMD5	dJ875H10.1	sterile alpha motif domain containing 5	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr6-1591	chr6	148567783	148568783	+	15.4	1000	Intergenic	MamRep605|Unknown|Unknown	-25129	NM_001346505	23328	Hs.193133	NM_015278	ENSG00000111961	SASH1	SH3D6A|dJ323M4.1	SAM and SH3 domain containing 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr6-1593	chr6	148612476	148613476	+	16	1000	"intron (NM_001346505, intron 1 of 19)"	"intron (NM_001346505, intron 1 of 19)"	19564	NM_001346505	23328	Hs.193133	NM_015278	ENSG00000111961	SASH1	SH3D6A|dJ323M4.1	SAM and SH3 domain containing 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-1594	chr6	148727505	148728505	+	16.6	1000	"intron (NM_015278, intron 2 of 19)"	"intron (NM_015278, intron 2 of 19)"	64276	NM_015278	23328	Hs.193133	NM_015278	ENSG00000111961	SASH1	SH3D6A|dJ323M4.1	SAM and SH3 domain containing 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr6-1595	chr6	149414517	149415517	+	15.4	1000	Intergenic	Intergenic	-61220	NR_134599	105378047	Hs.659484	NR_134599		LOC105378047	-	uncharacterized LOC105378047	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr6-1596	chr6	149632805	149633805	+	16.6	1000	"intron (NM_001292035, intron 2 of 6)"	"intron (NM_001292035, intron 2 of 6)"	-5758	NM_001292034	23118	Hs.269775	NM_015093	ENSG00000055208	TAB2	CHTD2|MAP3K7IP2|TAB-2	TGF-beta activated kinase 1/MAP3K7 binding protein 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr6-1597	chr6	150251112	150252426	+	19.8	1314	Intergenic	L1PA16|LINE|L1	-3880	NR_134598	105378052	Hs.549678	NR_134598	ENSG00000216621	LOC105378052	-	uncharacterized LOC105378052	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr6-160	chr6	43215983	43217322	+	27.5	1339	"intron (NM_032538, intron 2 of 14)"	MIRb|SINE|MIR	5234	NM_032538	84630	Hs.485436	NM_032538	ENSG00000146216	TTBK1	BDTK	tau tubulin kinase 1	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr6-1603	chr6	150528239	150529239	+	15.4	1000	"intron (NM_030949, intron 1 of 3)"	"intron (NM_030949, intron 1 of 3)"	64551	NM_030949	81706	Hs.486798	NM_030949	ENSG00000198729	PPP1R14C	CPI17-like|KEPI|NY-BR-81	protein phosphatase 1 regulatory inhibitor subunit 14C	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-1608	chr6	150708701	150711041	+	32.6	2340	"intron (NR_134655, intron 1 of 5)"	AluSz|SINE|Alu	19843	NM_001318495	389434	Hs.310225	NM_203395	ENSG00000009765	IYD	C6orf71|DEHAL1|IYD-1|TDH4	iodotyrosine deiodinase	protein-coding	32.64	6.31	5.17274168	1.20E-10
chr6-1618	chr6	153275594	153276594	+	16	1000	Intergenic	AluSz|SINE|Alu	28123	NM_012177	26271	Hs.520506	NM_012177	ENSG00000112029	FBXO5	EMI1|FBX5|Fbxo31	F-box protein 5	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-1619	chr6	154738792	154739792	+	15.4	1000	"intron (NM_173515, intron 9 of 12)"	LTR16A1|LTR|ERVL	-61392	NM_001130700	26034	Hs.146100	NM_015553	ENSG00000074706	IPCEF1	PIP3-E	interaction protein for cytohesin exchange factors 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr6-1620	chr6	154939879	154940879	+	15.4	1000	Intergenic	Intergenic	-108626	NM_173515	154043	Hs.16064	NM_173515	ENSG00000153721	CNKSR3	MAGI1	CNKSR family member 3	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr6-1626	chr6	157891608	157892608	+	16.6	1000	"intron (NM_153746, intron 1 of 8)"	"intron (NM_153746, intron 1 of 8)"	-58056	NR_037463	100500899		NR_037463	ENSG00000266617	MIR3692	-	microRNA 3692	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr6-1628	chr6	158038271	158039271	+	16.6	1000	"intron (NM_153746, intron 3 of 8)"	"intron (NM_153746, intron 3 of 8)"	88607	NR_037463	100500899		NR_037463	ENSG00000266617	MIR3692	-	microRNA 3692	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr6-1630	chr6	158044497	158045792	+	17.9	1295	"intron (NM_153746, intron 3 of 8)"	"intron (NM_153746, intron 3 of 8)"	94980	NR_037463	100500899		NR_037463	ENSG00000266617	MIR3692	-	microRNA 3692	ncRNA	17.92	3.4	5.270588235	8.42E-07
chr6-1634	chr6	158176854	158177854	+	15.4	1000	Intergenic	AluJb|SINE|Alu	-66849	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr6-1642	chr6	159496164	159499721	+	53.8	3557	Intergenic	Intergenic	-31758	NM_054114	117289	Hs.529984	NM_054114	ENSG00000164691	TAGAP	ARHGAP47|FKSG15|IDDM21|TAGAP1	T-cell activation RhoGTPase activating protein	protein-coding	53.77	10.68	5.034644195	1.03E-16
chr6-1644	chr6	159553312	159554312	+	16	1000	Intergenic	Intergenic	-36617	NM_032532	84624	Hs.520525	NM_032532	ENSG00000164694	FNDC1	AGS8|FNDC2|MEL4B3|bA243O10.1|dJ322A24.1	fibronectin type III domain containing 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr6-1645	chr6	159614729	159615729	+	16.6	1000	"intron (NM_032532, intron 1 of 22)"	L3b|LINE|CR1	-24190	NR_121668	101929122	Hs.134215	NR_121668		LOC101929122	-	uncharacterized LOC101929122	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr6-1648	chr6	159849351	159850351	+	14.7	1000	Intergenic	MIRb|SINE|MIR	45288	NR_125873	102724053	Hs.98463	NR_125873	ENSG00000234777	LOC102724053	-	uncharacterized LOC102724053	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr6-1651	chr6	160023368	160024627	+	18.6	1259	Intergenic	Intergenic	90363	NM_001322816	6648	Hs.487046	NM_000636	ENSG00000112096	SOD2	IPO-B|IPOB|MNSOD|MVCD6|Mn-SOD	"superoxide dismutase 2, mitochondrial"	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr6-1652	chr6	160593209	160594209	+	14.1	1000	Intergenic	Intergenic	50846	NM_153187	6580	Hs.117367	NM_003057	ENSG00000175003	SLC22A1	HOCT1|OCT1|oct1_cds	solute carrier family 22 member 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr6-1653	chr6	160678809	160679809	+	15.4	1000	"intron (NM_003058, intron 1 of 10)"	"intron (NM_003058, intron 1 of 10)"	654	NM_003058	6582	Hs.436385	NM_003058	ENSG00000112499	SLC22A2	2-Oct	solute carrier family 22 member 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr6-1656	chr6	160920734	160922079	+	19.8	1345	"intron (NR_028092, intron 2 of 9)"	"intron (NR_028092, intron 2 of 9)"	10750	NR_028092	80350	Hs.654503	NM_024492	ENSG00000213071	LPAL2	APOA2|APOAL|APOARGC|apo(a)rg-C	"lipoprotein(a) like 2, pseudogene"	pseudo	19.84	4.37	4.540045767	3.16E-06
chr6-1658	chr6	162196461	162197461	+	16	1000	"intron (NM_013987, intron 6 of 10)"	"intron (NM_013987, intron 6 of 10)"	304952	NR_134594	105378098	Hs.691066	NR_134593		LOC105378098	-	uncharacterized LOC105378098	ncRNA	16	3.88	4.12371134	7.91E-05
chr6-1663	chr6	166534694	166535694	+	16.6	1000	Intergenic	Intergenic	46963	NM_001270484	6862	Hs.389457	NM_003181	ENSG00000164458	T	SAVA|TFT	T brachyury transcription factor	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr6-1664	chr6	166539329	166540329	+	16	1000	Intergenic	LTR88b|LTR|Gypsy?	42328	NM_001270484	6862	Hs.389457	NM_003181	ENSG00000164458	T	SAVA|TFT	T brachyury transcription factor	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-1665	chr6	166656333	166657333	+	16	1000	"non-coding (NR_125862, exon 2 of 5)"	"non-coding (NR_125862, exon 2 of 5)"	6376	NR_125862	101929297	Hs.434661	NR_125862	ENSG00000233365	LOC101929297	-	uncharacterized LOC101929297	ncRNA	16	2.91	5.498281787	4.98E-06
chr6-1666	chr6	166887054	166890905	+	46.7	3851	"intron (NM_001318937, intron 8 of 18)"	"intron (NM_001318937, intron 8 of 18)"	-10108	NR_046793	100874353	Hs.675698	NR_046793	ENSG00000232082	RPS6KA2-IT1	-	RPS6KA2 intronic transcript 1	ncRNA	46.73	5.34	8.75093633	9.94E-22
chr6-1669	chr6	167019486	167020486	+	16	1000	"intron (NM_001006932, intron 2 of 21)"	"intron (NM_001006932, intron 2 of 21)"	20779	NM_021135	6196	Hs.655277	NM_021135	ENSG00000071242	RPS6KA2	HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3	ribosomal protein S6 kinase A2	protein-coding	16	1.94	8.24742268	7.67E-08
chr6-1670	chr6	167097196	167098196	+	16.6	1000	"intron (NM_001006932, intron 2 of 21)"	MER66B|LTR|ERV1	-56931	NM_021135	6196	Hs.655277	NM_021135	ENSG00000071242	RPS6KA2	HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3	ribosomal protein S6 kinase A2	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr6-1672	chr6	167570690	167571690	+	16	1000	"exon (NM_005299, exon 1 of 1)"	"exon (NM_005299, exon 1 of 1)"	129	NM_005299	2853	Hs.248124	NM_005299	ENSG00000120436	GPR31	12-HETER|HETER|HETER1	G protein-coupled receptor 31	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-1675	chr6	168680614	168681614	+	16.6	1000	Intergenic	Intergenic	37496	NR_110870	101929420	Hs.571211	NR_110870	ENSG00000234647	LOC101929420	-	uncharacterized LOC101929420	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr6-1679	chr6	169620503	169621503	+	16	1000	"intron (NM_003247, intron 21 of 22)"	"intron (NM_003247, intron 21 of 22)"	7696	NR_134621	101929523	Hs.442696	NR_134621	ENSG00000226445	LOC101929523	-	uncharacterized LOC101929523	ncRNA	16	0.97	16.49484536	3.54E-11
chr6-1687	chr6	170210672	170211672	+	16.6	1000	Intergenic	Intergenic	-12251	NR_026781	401288	Hs.556095	NM_207502	ENSG00000229214	LINC00242	C6orf122|NCRNA00242|dJ266L20.5	long intergenic non-protein coding RNA 242	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr6-1691	chr6	170540312	170542153	+	32	1841	Intergenic	Intergenic	30425	NR_002787	154449	Hs.447751	NR_002787	ENSG00000230960	LOC154449	-	uncharacterized LOC154449	ncRNA	32	5.34	5.992509363	3.79E-12
chr6-1693	chr6	218842	220464	+	21.8	1622	Intergenic	Intergenic	-14169	NR_126020	285766	Hs.657946	NR_126020	ENSG00000263667	LOC285766	-	uncharacterized LOC285766	ncRNA	21.76	2.91	7.47766323	3.87E-10
chr6-1695	chr6	231763	232763	+	15.4	1000	Intergenic	MER1A|DNA|hAT-Charlie	-26779	NR_126020	285766	Hs.657946	NR_126020	ENSG00000263667	LOC285766	-	uncharacterized LOC285766	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr6-1703	chr6	379783	381328	+	25.6	1545	Intergenic	Intergenic	-11184	NR_046000	3662	Hs.401013	NM_002460	ENSG00000137265	IRF4	LSIRF|MUM1|NF-EM5|SHEP8	interferon regulatory factor 4	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr6-1708	chr6	846901	847901	+	15.4	1000	Intergenic	Intergenic	-21097	NR_110853	101927691	Hs.552556	NR_110853		LOC101927691	-	uncharacterized LOC101927691	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr6-1713	chr6	1029206	1030521	+	19.8	1315	"intron (NR_027116, intron 1 of 3)"	"intron (NR_027116, intron 1 of 3)"	71704	NR_027116	285768	Hs.209463	NR_027115		LINC01622	-	long intergenic non-protein coding RNA 1622	ncRNA	19.84	4.37	4.540045767	3.16E-06
chr6-1720	chr6	1272971	1274869	+	28.8	1898	Intergenic	Intergenic	-38755	NM_033260	94234	Hs.591352	NM_033260	ENSG00000164379	FOXQ1	HFH1	forkhead box Q1	protein-coding	28.8	3.88	7.422680412	1.97E-12
chr6-1721	chr6	1361045	1362045	+	15.4	1000	Intergenic	Charlie1|DNA|hAT-Charlie	-28524	NM_001452	2295	Hs.484423	NM_001452	ENSG00000137273	FOXF2	FKHL6|FREAC-2|FREAC2	forkhead box F2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr6-1722	chr6	1379323	1381645	+	35.2	2322	Intergenic	Intergenic	-9585	NM_001452	2295	Hs.484423	NM_001452	ENSG00000137273	FOXF2	FKHL6|FREAC-2|FREAC2	forkhead box F2	protein-coding	35.2	6.8	5.176470588	2.10E-11
chr6-1727	chr6	2974509	2975509	+	15.4	1000	Intergenic	AluSg|SINE|Alu	-2610	NM_004568	5269	Hs.519523	NM_004568	ENSG00000124570	SERPINB6	CAP|DFNB91|MSTP057|PI-6|PI6|PTI|SPI3	serpin family B member 6	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr6-1736	chr6	3512042	3513042	+	16	1000	Intergenic	LTR16A2|LTR|ERVL	-55749	NM_015482	63027	Hs.713588	NM_015482	ENSG00000137266	SLC22A23	C6orf85	solute carrier family 22 member 23	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-1739	chr6	3800691	3801691	+	16	1000	Intergenic	Intergenic	-48409	NM_012135	26240	Hs.140944	NM_012135	ENSG00000145945	FAM50B	D6S2654E|X5L	family with sequence similarity 50 member B	protein-coding	16	0	16.4818808	1.26E-14
chr6-174	chr6	158274603	158280622	+	92.2	6019	"intron (NM_016224, intron 1 of 17)"	"intron (NM_016224, intron 1 of 17)"	33409	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	92.17	21.36	4.315074906	1.21E-23
chr6-1741	chr6	3886405	3888257	+	28.8	1852	Intergenic	Intergenic	37731	NM_012135	26240	Hs.140944	NM_012135	ENSG00000145945	FAM50B	D6S2654E|X5L	family with sequence similarity 50 member B	protein-coding	28.8	5.82	4.948453608	3.50E-09
chr6-1743	chr6	4180633	4181633	+	14.1	1000	Intergenic	Intergenic	9130	NR_125874	102724096	Hs.571140	NR_125874		LOC102724096	-	uncharacterized LOC102724096	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr6-1750	chr6	6268572	6269572	+	16	1000	"intron (NM_000129, intron 3 of 14)"	AluSq2|SINE|Alu	51852	NM_000129	2162	Hs.335513	NM_000129	ENSG00000124491	F13A1	F13A	coagulation factor XIII A chain	protein-coding	16	1.94	8.24742268	7.67E-08
chr6-1751	chr6	6640100	6641399	+	16	1299	"intron (NM_004271, intron 3 of 4)"	AluJr4|SINE|Alu	-17690	NR_026970	285780	Hs.655737	NM_173675	ENSG00000216863	LY86-AS1	LY86-AS|LY86AS	LY86 antisense RNA 1	ncRNA	16	2.91	5.498281787	4.98E-06
chr6-1753	chr6	6807932	6809218	+	18.6	1286	Intergenic	Intergenic	-185516	NR_026970	285780	Hs.655737	NM_173675	ENSG00000216863	LY86-AS1	LY86-AS|LY86AS	LY86 antisense RNA 1	ncRNA	18.56	2.43	7.637860082	1.53E-08
chr6-1754	chr6	6998533	6999533	+	15.4	1000	Intergenic	Intergenic	-108797	NM_001168344	6239	Hs.298248	NM_002955	ENSG00000124782	RREB1	FINB|HNT|LZ321|RREB-1|Zep-1	ras responsive element binding protein 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr6-1755	chr6	7512048	7513048	+	15.4	1000	Intergenic	MER5A1|DNA|hAT-Charlie	-29260	NM_001008844	1832	Hs.519873	NM_004415	ENSG00000096696	DSP	DCWHKTA|DP	desmoplakin	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr6-1757	chr6	7546016	7547289	+	20.5	1273	"intron (NM_001008844, intron 1 of 23)"	"intron (NM_001008844, intron 1 of 23)"	4844	NM_004415	1832	Hs.519873	NM_004415	ENSG00000096696	DSP	DCWHKTA|DP	desmoplakin	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr6-1760	chr6	10236718	10237718	+	16	1000	Intergenic	Intergenic	-175333	NR_033910	100130275	Hs.661431	NR_033910		TFAP2A-AS1	-	TFAP2A antisense RNA 1	ncRNA	16	1.46	10.95890411	3.44E-09
chr6-1761	chr6	11074847	11075847	+	16	1000	"intron (NR_038964, intron 4 of 4)"	"intron (NR_038964, intron 4 of 4)"	-18919	NM_001135575	221710	Hs.656600	NM_001135575	ENSG00000224531	SMIM13	C6orf228	small integral membrane protein 13	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-1762	chr6	11484757	11485757	+	15.4	1000	Intergenic	Intergenic	-53203	NM_001100829	100113407	Hs.146317	NM_001100829	ENSG00000205269	TMEM170B	-	transmembrane protein 170B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-1763	chr6	11601747	11602747	+	14.7	1000	Intergenic	Intergenic	63787	NM_001100829	100113407	Hs.146317	NM_001100829	ENSG00000205269	TMEM170B	-	transmembrane protein 170B	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr6-1765	chr6	12823853	12824853	+	16	1000	"intron (NM_001322310, intron 2 of 13)"	MER1A|DNA|hAT-Charlie	105422	NM_001322310	221692	Hs.436996	NM_030948	ENSG00000112137	PHACTR1	RPEL|RPEL1|dJ257A7.2	phosphatase and actin regulator 1	protein-coding	16	0	16.4818808	1.26E-14
chr6-1769	chr6	13447567	13448567	+	14.7	1000	"intron (NM_018988, intron 1 of 1)"	"intron (NM_018988, intron 1 of 1)"	24228	NR_038459	54438	Hs.484686	NM_018988	ENSG00000145990	GFOD1	ADG-90|C6orf114	glucose-fructose oxidoreductase domain containing 1	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr6-1770	chr6	13456959	13458241	+	18.6	1282	"intron (NM_018988, intron 1 of 1)"	"intron (NM_018988, intron 1 of 1)"	14695	NR_038459	54438	Hs.484686	NM_018988	ENSG00000145990	GFOD1	ADG-90|C6orf114	glucose-fructose oxidoreductase domain containing 1	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr6-1771	chr6	13467921	13469645	+	25.6	1724	TTS (NR_038459)	TTS (NR_038459)	3512	NR_038459	54438	Hs.484686	NM_018988	ENSG00000145990	GFOD1	ADG-90|C6orf114	glucose-fructose oxidoreductase domain containing 1	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr6-1777	chr6	15785257	15786257	+	15.4	1000	Intergenic	MSTA|LTR|ERVL-MaLR	-122468	NM_001271669	84062	Hs.571148	NM_032122	ENSG00000047579	DTNBP1	BLOC1S8|DBND|HPS7|My031|SDY	dystrobrevin binding protein 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr6-1779	chr6	15954813	15955813	+	15.4	1000	Intergenic	MIRb|SINE|MIR	-174004	NM_013262	29116	Hs.484738	NM_013262	ENSG00000007944	MYLIP	IDOL|MIR	myosin regulatory light chain interacting protein	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr6-1780	chr6	16081239	16082542	+	21.8	1303	Intergenic	MER47B|DNA|TcMar-Tigger	-47427	NM_013262	29116	Hs.484738	NM_013262	ENSG00000007944	MYLIP	IDOL|MIR	myosin regulatory light chain interacting protein	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr6-1783	chr6	18350105	18351105	+	16	1000	Intergenic	AluJr|SINE|Alu	-36976	NM_182757	255488	Hs.148741	NM_182757	ENSG00000137393	RNF144B	IBRDC2|PIR2|bA528A10.3|p53RFP	ring finger protein 144B	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-1788	chr6	24348515	24349515	+	16	1000	"intron (NM_016356, intron 2 of 9)"	L2b|LINE|L2	-8116	NM_181337	353219	Hs.697888	NM_181337	ENSG00000146049	KAAG1	RU2AS	kidney associated antigen 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-1791	chr6	28376764	28378093	+	19.8	1329	Intergenic	Intergenic	-9884	NR_136511	9753	Hs.134816	NM_014724	ENSG00000158691	ZSCAN12	ZFP96|ZNF29K1|ZNF305|ZNF96|dJ29K1.2	zinc finger and SCAN domain containing 12	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr6-1792	chr6	28381035	28382035	+	16	1000	Intergenic	AluJr|SINE|Alu	-13991	NR_136511	9753	Hs.134816	NM_014724	ENSG00000158691	ZSCAN12	ZFP96|ZNF29K1|ZNF305|ZNF96|dJ29K1.2	zinc finger and SCAN domain containing 12	protein-coding	16	2.43	6.58436214	7.90E-07
chr6-1793	chr6	28414549	28415549	+	14.7	1000	Intergenic	Intergenic	-3770	NM_001012455	222696	Hs.721841	NM_001012455	ENSG00000187987	ZSCAN23	ZNF390|ZNF453|dJ29K1.3|dJ29K1.3.1	zinc finger and SCAN domain containing 23	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr6-1795	chr6	33696373	33697373	+	15.4	1000	"intron (NM_054111, intron 2 of 5)"	"intron (NM_054111, intron 2 of 5)"	-17345	NM_032340	84300	Hs.732448	NM_032340	ENSG00000137288	UQCC2	C6orf125|Cbp6|M19|MNF1|bA6B20.2	ubiquinol-cytochrome c reductase complex assembly factor 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-1799	chr6	33816912	33818511	+	19.8	1599	Intergenic	MIRb|SINE|MIR	-45918	NM_002418	4295	Hs.2813	NM_002418	ENSG00000096395	MLN	-	motilin	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr6-1810	chr6	36288439	36289439	+	16	1000	"exon (NM_001010903, exon 10 of 12)"	"exon (NM_001010903, exon 10 of 12)"	15723	NM_001010903	389384	Hs.162104	NM_001010903	ENSG00000189325	C6orf222	-	chromosome 6 open reading frame 222	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-1811	chr6	36355475	36360035	+	61.4	4560	TTS (NM_152990)	TTS (NM_152990)	-2178	NM_001207040	51513	Hs.272398	NM_016135	ENSG00000010030	ETV7	TEL-2|TEL2|TELB	ETS variant 7	protein-coding	61.45	10.68	5.753745318	3.83E-21
chr6-1815	chr6	36644960	36648076	+	56.3	3116	promoter-TSS (NM_000389)	promoter-TSS (NM_000389)	31	NM_001220778	1026	Hs.370771	NM_000389	ENSG00000124762	CDKN1A	CAP20|CDKN1|CIP1|MDA-6|P21|SDI1|WAF1|p21CIP1	cyclin dependent kinase inhibitor 1A	protein-coding	56.33	3.88	14.51804124	3.11E-35
chr6-1817	chr6	37060891	37061891	+	14.7	1000	Intergenic	Intergenic	-76531	NM_002648	5292	Hs.81170	NM_002648	ENSG00000137193	PIM1	PIM	"Pim-1 proto-oncogene, serine/threonine kinase"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr6-1819	chr6	37167270	37168270	+	14.7	1000	Intergenic	AluSg|SINE|Alu	29848	NM_001243186	5292	Hs.81170	NM_002648	ENSG00000137193	PIM1	PIM	"Pim-1 proto-oncogene, serine/threonine kinase"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr6-183	chr6	373154	374548	+	28.2	1394	Intergenic	Intergenic	-17888	NR_046000	3662	Hs.401013	NM_002460	ENSG00000137265	IRF4	LSIRF|MUM1|NF-EM5|SHEP8	interferon regulatory factor 4	protein-coding	28.16	5.34	5.27340824	7.39E-10
chr6-1832	chr6	39243814	39245152	+	18.6	1338	Intergenic	Intergenic	37753	NM_031460	89822	Hs.162282	NM_031460	ENSG00000124780	KCNK17	K2p17.1|TALK-2|TALK2|TASK-4|TASK4	potassium two pore domain channel subfamily K member 17	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr6-1836	chr6	39967285	39968285	+	16	1000	Intergenic	Intergenic	-65495	NR_033233	4337	Hs.357128	NM_005942	ENSG00000124615	MOCS1	MIG11|MOCOD|MOCODA	molybdenum cofactor synthesis 1	protein-coding	16	1.46	10.95890411	3.44E-09
chr6-1838	chr6	40105017	40106017	+	16	1000	Intergenic	Intergenic	-203227	NR_033233	4337	Hs.357128	NM_005942	ENSG00000124615	MOCS1	MIG11|MOCOD|MOCODA	molybdenum cofactor synthesis 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-1839	chr6	40113171	40114171	+	15.4	1000	Intergenic	Intergenic	210074	NR_038887	401260	Hs.654837	NM_001001705		LINC00951	-	long intergenic non-protein coding RNA 951	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr6-1848	chr6	40942189	40943189	+	15.4	1000	"intron (NR_110873, intron 1 of 5)"	L1PREC2|LINE|L1	48330	NR_110873	101929555	Hs.552555	NR_110873		LOC101929555	-	uncharacterized LOC101929555	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr6-1851	chr6	43226963	43227963	+	15.4	1000	"intron (NM_032538, intron 12 of 14)"	"intron (NM_032538, intron 12 of 14)"	16045	NM_032538	84630	Hs.485436	NM_032538	ENSG00000146216	TTBK1	BDTK	tau tubulin kinase 1	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr6-1852	chr6	43235070	43236070	+	16	1000	"intron (NM_032538, intron 13 of 14)"	"intron (NM_032538, intron 13 of 14)"	24152	NM_032538	84630	Hs.485436	NM_032538	ENSG00000146216	TTBK1	BDTK	tau tubulin kinase 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr6-1853	chr6	43255523	43259235	+	51.8	3712	Intergenic	AluSq|SINE|Alu	-8619	NM_006672	10864	Hs.485438	NM_006672	ENSG00000137204	SLC22A7	NLT|OAT2	solute carrier family 22 member 7	protein-coding	51.85	11.65	4.450643777	4.03E-14
chr6-1861	chr6	43883046	43884332	+	16.6	1286	"intron (NR_024478, intron 1 of 1)"	"intron (NR_024478, intron 1 of 1)"	24924	NR_024478	100132354	Hs.376232	NR_024478		LINC01512	HI-LNC77	long intergenic non-protein coding RNA 1512	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr6-1863	chr6	43946162	43954793	+	109.5	8631	Intergenic	MLT1H|LTR|ERVL-MaLR	-17860	NM_001171992	221416	Hs.531926	NM_153246	ENSG00000181577	C6orf223	-	chromosome 6 open reading frame 223	protein-coding	109.45	17.47	6.265025758	1.52E-38
chr6-1864	chr6	44256837	44257837	+	16	1000	"intron (NM_182539, intron 1 of 4)"	"intron (NM_182539, intron 1 of 4)"	8121	NM_182539	202500	Hs.189183	NM_182539	ENSG00000146221	TCTE1	D6S46|DRC5|FAP155	t-complex-associated-testis-expressed 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr6-1865	chr6	44515746	44516746	+	15.4	1000	"intron (NR_134609, intron 1 of 1)"	L3b|LINE|CR1	3372	NR_134609	105375075	Hs.123393	NR_134609		LOC105375075	-	uncharacterized LOC105375075	ncRNA	15.36	0	15.82260557	1.26E-14
chr6-1866	chr6	44530136	44532208	+	31.4	2072	Intergenic	MIRb|SINE|MIR	-11554	NR_134609	105375075	Hs.123393	NR_134609		LOC105375075	-	uncharacterized LOC105375075	ncRNA	31.36	4.85	6.465979381	3.34E-12
chr6-1867	chr6	44620240	44621240	+	16	1000	Intergenic	Intergenic	-101122	NR_134609	105375075	Hs.123393	NR_134609		LOC105375075	-	uncharacterized LOC105375075	ncRNA	16	2.91	5.498281787	4.98E-06
chr6-187	chr6	13484693	13487913	+	60.8	3220	"5' UTR (NM_001242628, exon 1 of 2)"	"5' UTR (NM_001242628, exon 1 of 2)"	112	NM_001242628	54438	Hs.484686	NM_018988	ENSG00000145990	GFOD1	ADG-90|C6orf114	glucose-fructose oxidoreductase domain containing 1	protein-coding	60.81	10.68	5.693820225	2.22E-20
chr6-1872	chr6	45465344	45466344	+	14.7	1000	"intron (NM_001015051, intron 6 of 7)"	MIRb|SINE|MIR	75530	NM_001278478	860	Hs.535845	NM_004348	ENSG00000124813	RUNX2	AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA	runt related transcription factor 2	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr6-1875	chr6	45510876	45513451	+	42.2	2575	"intron (NM_001015051, intron 7 of 7)"	"intron (NM_001015051, intron 7 of 7)"	121849	NM_001278478	860	Hs.535845	NM_004348	ENSG00000124813	RUNX2	AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA	runt related transcription factor 2	protein-coding	42.25	8.74	4.83409611	5.23E-13
chr6-1877	chr6	45524239	45525770	+	22.4	1531	Intergenic	Intergenic	134690	NM_001278478	860	Hs.535845	NM_004348	ENSG00000124813	RUNX2	AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA	runt related transcription factor 2	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr6-1878	chr6	45592425	45593425	+	15.4	1000	Intergenic	Intergenic	202611	NM_001278478	860	Hs.535845	NM_004348	ENSG00000124813	RUNX2	AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA	runt related transcription factor 2	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr6-1879	chr6	45595254	45596254	+	16	1000	Intergenic	L2c|LINE|L2	205440	NM_001278478	860	Hs.535845	NM_004348	ENSG00000124813	RUNX2	AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA	runt related transcription factor 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-1881	chr6	46020178	46021178	+	16	1000	"intron (NM_001114086, intron 1 of 5)"	HAL1|LINE|L1	27407	NM_001114086	53405	Hs.485489	NM_016929	ENSG00000112782	CLIC5	DFNB102|DFNB103|MST130|MSTP130	chloride intracellular channel 5	protein-coding	16	2.43	6.58436214	7.90E-07
chr6-1882	chr6	46043864	46044864	+	14.7	1000	"intron (NM_001114086, intron 1 of 5)"	MLT1D|LTR|ERVL-MaLR	3721	NM_001114086	53405	Hs.485489	NM_016929	ENSG00000112782	CLIC5	DFNB102|DFNB103|MST130|MSTP130	chloride intracellular channel 5	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr6-1885	chr6	46255669	46256669	+	14.7	1000	"intron (NR_125838, intron 1 of 3)"	"intron (NR_125838, intron 1 of 3)"	12108	NR_125838	101926915	Hs.575377	NR_125838		LOC101926915	-	uncharacterized LOC101926915	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr6-1886	chr6	46316206	46317206	+	14.7	1000	"intron (NR_125838, intron 2 of 3)"	"intron (NR_125838, intron 2 of 3)"	-23077	NM_005822	10231	Hs.440168	NM_005822	ENSG00000172348	RCAN2	CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4	regulator of calcineurin 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr6-1888	chr6	46458886	46460277	+	19.8	1391	promoter-TSS (NM_001251974)	promoter-TSS (NM_001251974)	-208	NR_125837	101926898	Hs.639416	NR_125837		LOC101926898	-	uncharacterized LOC101926898	ncRNA	19.84	2.43	8.164609053	1.91E-09
chr6-1892	chr6	50790962	50793421	+	35.2	2459	"intron (NM_003221, intron 2 of 6)"	"intron (NM_003221, intron 2 of 6)"	5752	NM_003221	7021	Hs.33102	NM_003221	ENSG00000008196	TFAP2B	AP-2B|AP2-B|PDA2	transcription factor AP-2 beta	protein-coding	35.2	5.82	6.048109966	6.75E-13
chr6-1894	chr6	50808238	50811343	+	42.2	3105	"intron (NM_003221, intron 6 of 6)"	"intron (NM_003221, intron 6 of 6)"	23351	NM_003221	7021	Hs.33102	NM_003221	ENSG00000008196	TFAP2B	AP-2B|AP2-B|PDA2	transcription factor AP-2 beta	protein-coding	42.25	5.34	7.911985019	5.94E-19
chr6-1907	chr6	69676548	69677548	+	16	1000	"intron (NM_001704, intron 8 of 31)"	"intron (NM_001704, intron 8 of 31)"	331416	NM_001704	577	Hs.13261	NM_001704	ENSG00000135298	ADGRB3	BAI3	adhesion G protein-coupled receptor B3	protein-coding	16	2.43	6.58436214	7.90E-07
chr6-1914	chr6	84219794	84220794	+	16	1000	Intergenic	AluJr|SINE|Alu	-1900	NM_153362	167681	Hs.98381	NM_153362	ENSG00000146250	PRSS35	C6orf158|dJ223E3.1	"protease, serine 35"	protein-coding	16	1.94	8.24742268	7.67E-08
chr6-1915	chr6	87434431	87435431	+	14.7	1000	Intergenic	Intergenic	-212093	NM_000865	3354	Hs.1611	NM_000865	ENSG00000168830	HTR1E	5-HT1E	5-hydroxytryptamine receptor 1E	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr6-1916	chr6	89136655	89137655	+	14.1	1000	Intergenic	Intergenic	111933	NR_110867	101928936	Hs.533080	NR_110867		LOC101928936	-	uncharacterized LOC101928936	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr6-1922	chr6	99702432	99703432	+	15.4	1000	Intergenic	LTR1|LTR|ERV1	94599	NM_032511	84553	Hs.573245	NM_032511	ENSG00000146267	FAXC	C6orf168|dJ273F20	failed axon connections homolog	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr6-1924	chr6	100042352	100043352	+	16	1000	Intergenic	MSTD|LTR|ERVL-MaLR	-11798	NM_021620	59336	Hs.287386	NM_021620	ENSG00000112238	PRDM13	MU-MB-20.220|PFM10	PR/SET domain 13	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-1925	chr6	100051498	100054111	+	51.2	2613	Intergenic	Intergenic	-1846	NM_021620	59336	Hs.287386	NM_021620	ENSG00000112238	PRDM13	MU-MB-20.220|PFM10	PR/SET domain 13	protein-coding	51.21	8.74	5.859267735	3.69E-18
chr6-1931	chr6	101837714	101838714	+	16	1000	Intergenic	MIR3|SINE|MIR	-8647	NM_175768	2898	Hs.98262	NM_021956	ENSG00000164418	GRIK2	EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6	glutamate ionotropic receptor kainate type subunit 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-1939	chr6	107248414	107249414	+	16	1000	Intergenic	Intergenic	-13614	NR_033557	100422737	Hs.634681	NR_033557	ENSG00000235142	LOC100422737	-	uncharacterized LOC100422737	ncRNA	16	3.88	4.12371134	7.91E-05
chr6-194	chr6	37640954	37642521	+	28.2	1567	"intron (NM_153487, intron 1 of 16)"	"intron (NM_153487, intron 1 of 16)"	24029	NM_153487	266727	Hs.437993	NM_153487	ENSG00000112139	MDGA1	GPIM|MAMDC3	MAM domain containing glycosylphosphatidylinositol anchor 1	protein-coding	28.16	6.8	4.141176471	5.07E-08
chr6-1940	chr6	107296657	107297657	+	15.4	1000	Intergenic	Intergenic	-52219	NM_001142470	51250	Hs.486084	NM_016487	ENSG00000130349	C6orf203	HSPC230|PRED31	chromosome 6 open reading frame 203	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-1941	chr6	108005672	108006672	+	14.1	1000	Intergenic	HERV16-int|LTR|ERVL	47428	NM_001286409	256380	Hs.486109	NM_198081	ENSG00000146285	SCML4	dJ47M23.1	sex comb on midleg-like 4 (Drosophila)	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr6-1943	chr6	108032750	108033750	+	15.4	1000	"intron (NM_198081, intron 6 of 7)"	"intron (NM_198081, intron 6 of 7)"	20350	NM_001286409	256380	Hs.486109	NM_198081	ENSG00000146285	SCML4	dJ47M23.1	sex comb on midleg-like 4 (Drosophila)	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr6-1953	chr6	108432702	108434016	+	25	1314	Intergenic	Intergenic	-37418	NM_014028	28962	Hs.226780	NM_014028	ENSG00000081087	OSTM1	GIPN|GL|HSPC019|OPTB5	osteopetrosis associated transmembrane protein 1	protein-coding	24.96	4.37	5.711670481	4.38E-09
chr6-1956	chr6	108456735	108457735	+	16	1000	Intergenic	AluJr4|SINE|Alu	-30027	NM_003269	7101	Hs.157688	NM_003269	ENSG00000112333	NR2E1	TLL|TLX|XTLL	nuclear receptor subfamily 2 group E member 1	protein-coding	16	0	16.4818808	1.26E-14
chr6-1957	chr6	108468226	108469226	+	15.4	1000	Intergenic	AluSq2|SINE|Alu	-18536	NM_003269	7101	Hs.157688	NM_003269	ENSG00000112333	NR2E1	TLL|TLX|XTLL	nuclear receptor subfamily 2 group E member 1	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr6-1960	chr6	110731547	110732547	+	16	1000	"intron (NM_003649, intron 2 of 4)"	"intron (NM_003649, intron 2 of 4)"	4706	NM_003649	8528	Hs.591348	NM_003649	ENSG00000203797	DDO	DASOX|DDO-1|DDO-2	D-aspartate oxidase	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-1964	chr6	114174156	114175156	+	16	1000	Intergenic	L2a|LINE|L2	-3858	NM_002356	4082	Hs.519909	NM_002356	ENSG00000277443	MARCKS	80K-L|MACS|PKCSL|PRKCSL	myristoylated alanine rich protein kinase C substrate	protein-coding	16	0.97	16.49484536	3.54E-11
chr6-1967	chr6	118486637	118487637	+	14.7	1000	"intron (NM_001029858, intron 2 of 7)"	"intron (NM_001029858, intron 2 of 7)"	80071	NR_134601	105377967	Hs.692865	NR_134601		LOC105377967	-	uncharacterized LOC105377967	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr6-197	chr6	43916371	43917371	+	21.8	1000	Intergenic	Intergenic	-51466	NM_001171992	221416	Hs.531926	NM_153246	ENSG00000181577	C6orf223	-	chromosome 6 open reading frame 223	protein-coding	21.76	4.37	4.979405034	1.32E-07
chr6-1972	chr6	125668724	125670671	+	28.8	1947	Intergenic	MLT2C1|LTR|ERVL	-46415	NM_016063	51020	Hs.32826	NM_016063	ENSG00000111906	HDDC2	C6orf74|CGI-130|NS5ATP2|dJ167O5.2	HD domain containing 2	protein-coding	28.8	3.88	7.422680412	1.97E-12
chr6-1974	chr6	125673193	125674193	+	16	1000	Intergenic	MSTD|LTR|ERVL-MaLR	-50411	NM_016063	51020	Hs.32826	NM_016063	ENSG00000111906	HDDC2	C6orf74|CGI-130|NS5ATP2|dJ167O5.2	HD domain containing 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-1975	chr6	125699818	125703462	+	49.3	3644	Intergenic	tRNA-Met_|tRNA|tRNA	-78358	NM_016063	51020	Hs.32826	NM_016063	ENSG00000111906	HDDC2	C6orf74|CGI-130|NS5ATP2|dJ167O5.2	HD domain containing 2	protein-coding	49.29	12.13	4.063478978	2.52E-12
chr6-1978	chr6	126084119	126085119	+	14.7	1000	Intergenic	AluJb|SINE|Alu	13887	NM_012259	23493	Hs.144287	NM_012259	ENSG00000135547	HEY2	CHF1|GRIDLOCK|GRL|HERP1|HESR2|HRT2|bHLHb32	hes related family bHLH transcription factor with YRPW motif 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr6-1983	chr6	132345553	132346553	+	16	1000	Intergenic	L1PA10|LINE|L1	-73535	NM_001901	1490	Hs.410037	NM_001901	ENSG00000118523	CTGF	CCN2|HCS24|IGFBP8|NOV2	connective tissue growth factor	protein-coding	16	1.94	8.24742268	7.67E-08
chr6-1992	chr6	135835034	135836034	+	14.1	1000	"intron (NR_026805, intron 1 of 3)"	"intron (NR_026805, intron 1 of 3)"	16595	NR_026805	100131814	Hs.734007	NR_026805	ENSG00000231028	LINC00271	C6orf217|NCRNA00271	long intergenic non-protein coding RNA 271	ncRNA	14.08	0	14.5040551	3.99E-13
chr6-1997	chr6	136686847	136687847	+	16	1000	"intron (NM_001198618, intron 9 of 17)"	"intron (NM_001198618, intron 9 of 17)"	-76358	NM_001077441	9774	Hs.486542	NM_014739	ENSG00000029363	BCLAF1	BTF|bK211L9.1	BCL2 associated transcription factor 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-1998	chr6	136862814	136863814	+	14.7	1000	"intron (NM_001198616, intron 1 of 16)"	"intron (NM_001198616, intron 1 of 16)"	8643	NM_001198617	9053	Hs.486548	NM_003980	ENSG00000135525	MAP7	E-MAP-115|EMAP115	microtubule associated protein 7	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr6-1999	chr6	136942689	136944304	+	21.1	1615	"intron (NM_005923, intron 15 of 29)"	L1MCa|LINE|L1	-6756	NR_125858	101928461	Hs.666518	NR_125858		LOC101928461	-	uncharacterized LOC101928461	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr6-2000	chr6	137141479	137142479	+	14.1	1000	Intergenic	Intergenic	-1723	NM_000288	5191	Hs.280932	NM_000288	ENSG00000112357	PEX7	PBD9B|PTS2R|RCDP1|RD	peroxisomal biogenesis factor 7	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr6-2003	chr6	137475164	137476164	+	15.4	1000	"intron (NM_181309, intron 4 of 5)"	AluSx|SINE|Alu	19121	NM_052962	116379	Hs.126891	NM_052962	ENSG00000164485	IL22RA2	CRF2-10|CRF2-S1|CRF2X|IL-22BP|IL-22R-alpha-2|IL-22RA2|ZCYTOR16	interleukin 22 receptor subunit alpha 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr6-2005	chr6	137487686	137488686	+	15.4	1000	"intron (NM_181310, intron 1 of 4)"	HERV1_I-int|LTR|ERV1	6599	NM_052962	116379	Hs.126891	NM_052962	ENSG00000164485	IL22RA2	CRF2-10|CRF2-S1|CRF2X|IL-22BP|IL-22R-alpha-2|IL-22RA2|ZCYTOR16	interleukin 22 receptor subunit alpha 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr6-2017	chr6	137817195	137818517	+	21.8	1322	Intergenic	Intergenic	-2325	NM_175747	167826	Hs.195398	NM_175747	ENSG00000177468	OLIG3	Bhlhb7|bHLHe20	oligodendrocyte transcription factor 3	protein-coding	21.76	0.97	22.43298969	1.19E-17
chr6-2018	chr6	137856641	137857641	+	15.4	1000	Intergenic	AluJr|SINE|Alu	-41610	NM_175747	167826	Hs.195398	NM_175747	ENSG00000177468	OLIG3	Bhlhb7|bHLHe20	oligodendrocyte transcription factor 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-2020	chr6	138335278	138336278	+	15.4	1000	Intergenic	L2b|LINE|L2	92882	NM_022121	64065	Hs.201446	NM_022121	ENSG00000112378	PERP	KCP1|KRTCAP1|PIGPC1|THW|dJ496H19.1	"PERP, TP53 apoptosis effector"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-2023	chr6	139153434	139154434	+	16	1000	"intron (NM_001077706, intron 4 of 21)"	"intron (NM_001077706, intron 4 of 21)"	36686	NM_001195037	345930	Hs.660603	NM_001077706	ENSG00000203734	ECT2L	ARHGEF32|C6orf91|FBXO49|LFDH|dJ509I19.2|dJ509I19.3|dJ509I19.5	epithelial cell transforming 2 like	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-2024	chr6	139190422	139191422	+	15.4	1000	"intron (NM_001077706, intron 13 of 21)"	"intron (NM_001077706, intron 13 of 21)"	73674	NM_001195037	345930	Hs.660603	NM_001077706	ENSG00000203734	ECT2L	ARHGEF32|C6orf91|FBXO49|LFDH|dJ509I19.2|dJ509I19.3|dJ509I19.5	epithelial cell transforming 2 like	protein-coding	15.36	0	15.82260557	1.26E-14
chr6-2029	chr6	144328673	144330326	+	29.4	1653	promoter-TSS (NM_001289047)	promoter-TSS (NM_001289047)	54	NM_001289049	5325	Hs.743225	NM_002656	ENSG00000118495	PLAGL1	LOT1|ZAC|ZAC1	PLAG1 like zinc finger 1	protein-coding	29.44	5.34	5.513108614	1.33E-10
chr6-2030	chr6	144470685	144471685	+	16	1000	promoter-TSS (NM_003764)	promoter-TSS (NM_003764)	-469	NM_003764	8676	Hs.118958	NM_003764	ENSG00000135604	STX11	FHL4|HLH4|HPLH4	syntaxin 11	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-2031	chr6	147757014	147758014	+	16	1000	Intergenic	Intergenic	-72314	NM_001030060	389432	Hs.567973	NM_001030060	ENSG00000203727	SAMD5	dJ875H10.1	sterile alpha motif domain containing 5	protein-coding	16	0.97	16.49484536	3.54E-11
chr6-2033	chr6	148435469	148436469	+	14.7	1000	Intergenic	AluSz|SINE|Alu	-157443	NM_001346505	23328	Hs.193133	NM_015278	ENSG00000111961	SASH1	SH3D6A|dJ323M4.1	SAM and SH3 domain containing 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr6-2036	chr6	148804774	148805774	+	16	1000	"intron (NM_015278, intron 7 of 19)"	L3b|LINE|CR1	-23997	NM_001346508	23328	Hs.193133	NM_015278	ENSG00000111961	SASH1	SH3D6A|dJ323M4.1	SAM and SH3 domain containing 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr6-2037	chr6	148824750	148826003	+	23	1253	"intron (NM_015278, intron 8 of 19)"	L2c|LINE|L2	-3895	NM_001346508	23328	Hs.193133	NM_015278	ENSG00000111961	SASH1	SH3D6A|dJ323M4.1	SAM and SH3 domain containing 1	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr6-2038	chr6	149027837	149028837	+	15.4	1000	Intergenic	MLT2A2|LTR|ERVL	-39934	NM_005715	10090	Hs.657370	NM_005715	ENSG00000111962	UST	2OST	uronyl 2-sulfotransferase	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr6-2053	chr6	150618875	150619875	+	15.4	1000	Intergenic	Intergenic	-70653	NM_203395	389434	Hs.310225	NM_203395	ENSG00000009765	IYD	C6orf71|DEHAL1|IYD-1|TDH4	iodotyrosine deiodinase	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr6-2054	chr6	150658126	150662155	+	64	4029	Intergenic	AluSz|SINE|Alu	-29888	NM_203395	389434	Hs.310225	NM_203395	ENSG00000009765	IYD	C6orf71|DEHAL1|IYD-1|TDH4	iodotyrosine deiodinase	protein-coding	64.01	13.11	4.882532418	4.75E-19
chr6-206	chr6	101710695	101712253	+	27.5	1558	Intergenic	MER82|DNA|TcMar-Tigger	-135387	NM_175768	2898	Hs.98262	NM_021956	ENSG00000164418	GRIK2	EAA4|GLR6|GLUK6|GLUR6|GluK2|MRT6	glutamate ionotropic receptor kainate type subunit 2	protein-coding	27.52	2.91	9.457044674	7.03E-14
chr6-2061	chr6	150690204	150691918	+	25	1714	"intron (NR_134655, intron 1 of 5)"	"intron (NR_134655, intron 1 of 5)"	1033	NM_001318495	389434	Hs.310225	NM_203395	ENSG00000009765	IYD	C6orf71|DEHAL1|IYD-1|TDH4	iodotyrosine deiodinase	protein-coding	24.96	3.4	7.341176471	7.55E-11
chr6-207	chr6	110382831	110384115	+	27.5	1284	Intergenic	AluSx1|SINE|Alu	84014	NM_001286099	2830	Hs.46332	NM_005284	ENSG00000146360	GPR6	-	G protein-coupled receptor 6	protein-coding	27.52	4.37	6.297482838	1.19E-10
chr6-2072	chr6	152652331	152653331	+	14.7	1000	"exon (NM_033071, exon 77 of 146)"	"exon (NM_033071, exon 77 of 146)"	-48834	NR_120501	100505475	Hs.571203	NR_120501		SYNE1-AS1	-	SYNE1 antisense RNA 1	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr6-2073	chr6	152663016	152664016	+	15.4	1000	"intron (NM_182961, intron 74 of 145)"	"intron (NM_182961, intron 74 of 145)"	-38149	NR_120501	100505475	Hs.571203	NR_120501		SYNE1-AS1	-	SYNE1 antisense RNA 1	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr6-2079	chr6	158095327	158096327	+	16	1000	TTS (NM_024630)	TTS (NM_024630)	145663	NR_037463	100500899		NR_037463	ENSG00000266617	MIR3692	-	microRNA 3692	ncRNA	16	2.91	5.498281787	4.98E-06
chr6-2084	chr6	158239314	158240314	+	14.7	1000	Intergenic	Intergenic	-4389	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr6-2088	chr6	158268004	158270471	+	39.7	2467	"intron (NM_016224, intron 1 of 17)"	L2a|LINE|L2	25034	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	39.69	8.74	4.541189931	1.21E-11
chr6-209	chr6	134373786	134378896	+	73.6	5110	Intergenic	Intergenic	-2552	NM_145176	154091	Hs.486508	NM_145176	ENSG00000146411	SLC2A12	GLUT12|GLUT8	solute carrier family 2 member 12	protein-coding	73.61	15.53	4.739858339	1.02E-20
chr6-2096	chr6	158322629	158323629	+	16	1000	"intron (NM_016224, intron 6 of 17)"	"intron (NM_016224, intron 6 of 17)"	78926	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-2097	chr6	158354394	158355394	+	16	1000	"intron (NM_016224, intron 13 of 17)"	"intron (NM_016224, intron 13 of 17)"	-47994	NM_003898	8871	Hs.434494	NM_003898	ENSG00000078269	SYNJ2	INPP5H	synaptojanin 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr6-210	chr6	135818368	135819368	+	21.8	1000	promoter-TSS (NM_001134832)	promoter-TSS (NM_001134832)	35	NM_017651	54806	Hs.386684	NM_017651	ENSG00000135541	AHI1	AHI-1|JBTS3|ORF1|dJ71N10.1	Abelson helper integration site 1	protein-coding	21.76	1.46	14.90410959	8.59E-15
chr6-2100	chr6	158364206	158366598	+	38.4	2392	"3' UTR (NM_016224, exon 18 of 18)"	"3' UTR (NM_016224, exon 18 of 18)"	-37486	NM_003898	8871	Hs.434494	NM_003898	ENSG00000078269	SYNJ2	INPP5H	synaptojanin 2	protein-coding	38.4	6.8	5.647058824	1.26E-13
chr6-2101	chr6	158372423	158373423	+	15.4	1000	Intergenic	MLT1A0|LTR|ERVL-MaLR	-29965	NM_003898	8871	Hs.434494	NM_003898	ENSG00000078269	SYNJ2	INPP5H	synaptojanin 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr6-2102	chr6	158375303	158376303	+	15.4	1000	Intergenic	Intergenic	-27085	NM_003898	8871	Hs.434494	NM_003898	ENSG00000078269	SYNJ2	INPP5H	synaptojanin 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr6-2104	chr6	159485639	159486639	+	16	1000	Intergenic	Intergenic	-19955	NM_054114	117289	Hs.529984	NM_054114	ENSG00000164691	TAGAP	ARHGAP47|FKSG15|IDDM21|TAGAP1	T-cell activation RhoGTPase activating protein	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-2109	chr6	159893057	159894057	+	15.4	1000	Intergenic	MSTA|LTR|ERVL-MaLR	88994	NR_125873	102724053	Hs.98463	NR_125873	ENSG00000234777	LOC102724053	-	uncharacterized LOC102724053	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr6-2118	chr6	160775059	160776059	+	16	1000	"intron (NM_021977, intron 1 of 10)"	"intron (NM_021977, intron 1 of 10)"	6154	NM_021977	6581	Hs.567337	NM_021977	ENSG00000146477	SLC22A3	EMT|EMTH|OCT3	solute carrier family 22 member 3	protein-coding	16	1.94	8.24742268	7.67E-08
chr6-212	chr6	137113527	137114527	+	21.8	1000	promoter-TSS (NM_005923)	promoter-TSS (NM_005923)	-371	NM_005923	4217	Hs.186486	NM_005923	ENSG00000197442	MAP3K5	ASK1|MAPKKK5|MEKK5	mitogen-activated protein kinase kinase kinase 5	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr6-2121	chr6	160854677	160855677	+	15.4	1000	"intron (NM_021977, intron 5 of 10)"	"intron (NM_021977, intron 5 of 10)"	76979	NR_028092	80350	Hs.654503	NM_024492	ENSG00000213071	LPAL2	APOA2|APOAL|APOARGC|apo(a)rg-C	"lipoprotein(a) like 2, pseudogene"	pseudo	15.36	3.4	4.517647059	2.25E-05
chr6-2122	chr6	160880070	160881479	+	21.8	1409	Intergenic	Intergenic	51382	NR_028092	80350	Hs.654503	NM_024492	ENSG00000213071	LPAL2	APOA2|APOAL|APOARGC|apo(a)rg-C	"lipoprotein(a) like 2, pseudogene"	pseudo	21.76	4.37	4.979405034	1.32E-07
chr6-2123	chr6	163666537	163667537	+	16	1000	"intron (NM_001080379, intron 4 of 4)"	L2a|LINE|L2	-54003	NR_122120	729658	Hs.728991	NR_122120		PACRG-AS3	-	PACRG antisense RNA 3	ncRNA	16	1.94	8.24742268	7.67E-08
chr6-2125	chr6	166113774	166114774	+	15.4	1000	Intergenic	Intergenic	-38686	NM_001130690	10846	Hs.348762	NM_006661	ENSG00000112541	PDE10A	ADSD2|HSPDE10A|IOLOD|LINC00473|PDE10A19	phosphodiesterase 10A	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr6-2126	chr6	166189618	166190618	+	14.7	1000	Intergenic	Intergenic	-114530	NM_001130690	10846	Hs.348762	NM_006661	ENSG00000112541	PDE10A	ADSD2|HSPDE10A|IOLOD|LINC00473|PDE10A19	phosphodiesterase 10A	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr6-2127	chr6	166805872	166806872	+	15.4	1000	Intergenic	LTR12C|LTR|ERV1	-9871	NM_001270879	51660	Hs.172755	NM_016098	ENSG00000060762	MPC1	BRP44L|CGI-129|MPYCD|dJ68L15.3	mitochondrial pyruvate carrier 1	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr6-2128	chr6	166969207	166970719	+	23.7	1512	"intron (NM_001006932, intron 2 of 21)"	"intron (NM_001006932, intron 2 of 21)"	-11785	NM_001318938	6196	Hs.655277	NM_021135	ENSG00000071242	RPS6KA2	HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3	ribosomal protein S6 kinase A2	protein-coding	23.68	4.37	5.418764302	2.46E-08
chr6-213	chr6	137733407	137739258	+	85.8	5851	Intergenic	Intergenic	79199	NM_175747	167826	Hs.195398	NM_175747	ENSG00000177468	OLIG3	Bhlhb7|bHLHe20	oligodendrocyte transcription factor 3	protein-coding	85.77	17.96	4.775612472	1.98E-24
chr6-2130	chr6	167067538	167068538	+	14.7	1000	"intron (NM_001006932, intron 2 of 21)"	L1MC4|LINE|L1	-27273	NM_021135	6196	Hs.655277	NM_021135	ENSG00000071242	RPS6KA2	HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3	ribosomal protein S6 kinase A2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr6-2133	chr6	167559961	167560961	+	16	1000	Intergenic	Intergenic	10858	NM_005299	2853	Hs.248124	NM_005299	ENSG00000120436	GPR31	12-HETER|HETER|HETER1	G protein-coupled receptor 31	protein-coding	16	0.97	16.49484536	3.54E-11
chr6-2137	chr6	168442568	168443884	+	21.1	1316	"intron (NM_005355, intron 7 of 7)"	"intron (NM_005355, intron 7 of 7)"	24673	NM_005355	3834	Hs.150013	NM_005355	ENSG00000125337	KIF25	KNSL3	kinesin family member 25	protein-coding	21.12	0.49	43.10204082	5.97E-21
chr6-2139	chr6	168545722	168546994	+	18.6	1272	Intergenic	L1MA2|LINE|L1	-64121	NR_110312	79981	Hs.266746	NM_024919	ENSG00000153303	FRMD1	bA164L23.1	FERM domain containing 1	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr6-214	chr6	138833822	138834822	+	21.8	1000	"intron (NM_020464, intron 1 of 6)"	"intron (NM_020464, intron 1 of 6)"	-13743	NM_001144060	57224	Hs.652741	NM_020464	ENSG00000135540	NHSL1	C6orf63	NHS like 1	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr6-2142	chr6	168598984	168599984	+	14.7	1000	Intergenic	Intergenic	27713	NR_134590	105378137	Hs.549668	NR_134590	ENSG00000237987	LOC105378137	-	uncharacterized LOC105378137	ncRNA	14.72	0	15.16333034	3.99E-13
chr6-2143	chr6	168643640	168644640	+	15.4	1000	"intron (NR_110870, intron 1 of 4)"	"intron (NR_110870, intron 1 of 4)"	522	NR_110870	101929420	Hs.571211	NR_110870	ENSG00000234647	LOC101929420	-	uncharacterized LOC101929420	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr6-2144	chr6	168980229	168981229	+	16	1000	"intron (NM_001166412, intron 7 of 12)"	"intron (NM_001166412, intron 7 of 12)"	138898	NM_001166412	64094	Hs.487200	NM_022138	ENSG00000112562	SMOC2	DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1	SPARC related modular calcium binding 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr6-2146	chr6	169298925	169300194	+	17.9	1269	Intergenic	AluSx3|SINE|Alu	64918	NR_136248	105378146	Hs.343631	NR_136248		LOC105378146	-	uncharacterized LOC105378146	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr6-2149	chr6	169400166	169401166	+	13.4	1000	Intergenic	Intergenic	35072	NR_134622	101929460	Hs.355225	NR_134622	ENSG00000229720	LOC101929460	-	uncharacterized LOC101929460	ncRNA	13.44	2.43	5.530864198	2.99E-05
chr6-2150	chr6	169588794	169589794	+	14.7	1000	Intergenic	Intergenic	-6459	NR_125863	101929504	Hs.147721	NR_125863	ENSG00000261039	LOC101929504	-	uncharacterized LOC101929504	ncRNA	14.72	0	15.16333034	3.99E-13
chr6-2176	chr6	402638	403638	+	16	1000	"intron (NR_046000, intron 7 of 9)"	"intron (NR_046000, intron 7 of 9)"	11399	NM_002460	3662	Hs.401013	NM_002460	ENSG00000137265	IRF4	LSIRF|MUM1|NF-EM5|SHEP8	interferon regulatory factor 4	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-2177	chr6	442646	444849	+	32.6	2203	Intergenic	Intergenic	52008	NM_002460	3662	Hs.401013	NM_002460	ENSG00000137265	IRF4	LSIRF|MUM1|NF-EM5|SHEP8	interferon regulatory factor 4	protein-coding	32.64	4.37	7.469107551	5.18E-14
chr6-2179	chr6	451902	452902	+	15.4	1000	Intergenic	Intergenic	60663	NM_002460	3662	Hs.401013	NM_002460	ENSG00000137265	IRF4	LSIRF|MUM1|NF-EM5|SHEP8	interferon regulatory factor 4	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-2185	chr6	863889	865569	+	25	1680	Intergenic	Intergenic	-3769	NR_110853	101927691	Hs.552556	NR_110853		LOC101927691	-	uncharacterized LOC101927691	ncRNA	24.96	4.85	5.146391753	2.27E-08
chr6-2186	chr6	947402	948402	+	14.1	1000	Intergenic	L2a|LINE|L2	79404	NR_110853	101927691	Hs.552556	NR_110853		LOC101927691	-	uncharacterized LOC101927691	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr6-2190	chr6	1061539	1062921	+	21.1	1382	"intron (NR_027116, intron 1 of 3)"	"intron (NR_027116, intron 1 of 3)"	39337	NR_027116	285768	Hs.209463	NR_027115		LINC01622	-	long intergenic non-protein coding RNA 1622	ncRNA	21.12	3.88	5.443298969	1.44E-07
chr6-2192	chr6	1121097	1122097	+	15.4	1000	Intergenic	Intergenic	-20030	NR_027115	285768	Hs.209463	NR_027115		LINC01622	-	long intergenic non-protein coding RNA 1622	ncRNA	15.36	0.49	31.34693878	1.26E-14
chr6-2194	chr6	1178846	1179846	+	14.1	1000	Intergenic	Intergenic	-77779	NR_027115	285768	Hs.209463	NR_027115		LINC01622	-	long intergenic non-protein coding RNA 1622	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr6-2198	chr6	1281275	1282275	+	15.4	1000	Intergenic	Intergenic	-30900	NM_033260	94234	Hs.591352	NM_033260	ENSG00000164379	FOXQ1	HFH1	forkhead box Q1	protein-coding	15.36	0	15.82260557	1.26E-14
chr6-2199	chr6	1314659	1315969	+	17.9	1310	TTS (NM_033260)	TTS (NM_033260)	2639	NM_033260	94234	Hs.591352	NM_033260	ENSG00000164379	FOXQ1	HFH1	forkhead box Q1	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr6-220	chr6	168195883	168198236	+	48.6	2353	"intron (NR_026773, intron 1 of 3)"	"intron (NR_026773, intron 1 of 3)"	480	NR_026773	26238	Hs.520583	NM_014356	ENSG00000146521	LINC01558	C6orf123|HGC6.2|LINC01557|dJ431P23.4	long intergenic non-protein coding RNA 1558	ncRNA	48.65	9.22	5.276572668	6.74E-16
chr6-2201	chr6	1384935	1389288	+	63.4	4353	Intergenic	Intergenic	-2958	NM_001452	2295	Hs.484423	NM_001452	ENSG00000137273	FOXF2	FKHL6|FREAC-2|FREAC2	forkhead box F2	protein-coding	63.37	7.28	8.70467033	6.15E-29
chr6-2207	chr6	1399775	1400775	+	13.4	1000	Intergenic	Intergenic	-9629	NR_106778	102466720		NR_106778	ENSG00000275859	MIR6720	hsa-mir-6720|mir-6720	microRNA 6720	ncRNA	13.44	2.43	5.530864198	2.99E-05
chr6-221	chr6	170191694	170192694	+	19.2	1000	"intron (NR_026781, intron 1 of 1)"	"intron (NR_026781, intron 1 of 1)"	2025	NR_026780	80069	Hs.677182	NM_025002	ENSG00000231690	LINC00574	C6orf208|dJ182D15.1	long intergenic non-protein coding RNA 574	ncRNA	19.2	3.4	5.647058824	1.47E-07
chr6-2210	chr6	1461200	1462200	+	14.7	1000	Intergenic	LTR49-int|LTR|ERV1	-71054	NR_106778	102466720		NR_106778	ENSG00000275859	MIR6720	hsa-mir-6720|mir-6720	microRNA 6720	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr6-2217	chr6	2934217	2935217	+	14.7	1000	Intergenic	BLACKJACK|DNA|hAT-Blackjack	27687	NM_001271825	5269	Hs.519523	NM_004568	ENSG00000124570	SERPINB6	CAP|DFNB91|MSTP057|PI-6|PI6|PTI|SPI3	serpin family B member 6	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr6-2219	chr6	2948011	2949569	+	22.4	1558	"exon (NM_001271822, exon 7 of 7)"	"exon (NM_001271822, exon 7 of 7)"	13614	NM_001271825	5269	Hs.519523	NM_004568	ENSG00000124570	SERPINB6	CAP|DFNB91|MSTP057|PI-6|PI6|PTI|SPI3	serpin family B member 6	protein-coding	22.4	3.4	6.588235294	3.73E-09
chr6-2223	chr6	3212995	3213995	+	12.8	1000	Intergenic	AluSg|SINE|Alu	14473	NM_178012	347733	Hs.300701	NM_178012	ENSG00000137285	TUBB2B	PMGYSA|bA506K6.1	tubulin beta 2B class IIb	protein-coding	12.8	1.94	6.597938144	4.51E-06
chr6-2226	chr6	3243768	3244768	+	15.4	1000	Intergenic	Intergenic	-14894	NM_001128591	389362	Hs.207069	NM_001128591	ENSG00000180822	PSMG4	C6orf86|PAC4|bA506K6.2	proteasome assembly chaperone 4	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-2227	chr6	3518711	3520110	+	17.3	1399	Intergenic	Intergenic	-62617	NM_015482	63027	Hs.713588	NM_015482	ENSG00000137266	SLC22A23	C6orf85	solute carrier family 22 member 23	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr6-2232	chr6	3871543	3873254	+	25.6	1711	Intergenic	MSTA|LTR|ERVL-MaLR	22798	NM_012135	26240	Hs.140944	NM_012135	ENSG00000145945	FAM50B	D6S2654E|X5L	family with sequence similarity 50 member B	protein-coding	25.6	4.85	5.278350515	4.26E-09
chr6-2237	chr6	3942750	3944428	+	23.7	1678	Intergenic	Intergenic	-77980	NM_003913	8899	Hs.159014	NM_003913	ENSG00000112739	PRPF4B	PR4H|PRP4|PRP4H|PRP4K|dJ1013A10.1	pre-mRNA processing factor 4B	protein-coding	23.68	4.37	5.418764302	2.46E-08
chr6-2238	chr6	4170361	4171361	+	15.4	1000	Intergenic	MIRb|SINE|MIR	19402	NR_125874	102724096	Hs.571140	NR_125874		LOC102724096	-	uncharacterized LOC102724096	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr6-2244	chr6	4562417	4563417	+	12.8	1000	Intergenic	MLT1B|LTR|ERVL-MaLR	-47882	NR_122107	497048	Hs.591355	NM_001011540		KU-MEL-3	-	uncharacterized LOC497048	ncRNA	12.8	1.94	6.597938144	4.51E-06
chr6-2247	chr6	6174819	6175819	+	14.7	1000	"intron (NM_000129, intron 11 of 14)"	MIR|SINE|MIR	-5651	NR_107007	102466866		NR_107007	ENSG00000263572	MIR7853	hsa-mir-7853	microRNA 7853	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr6-2250	chr6	6714168	6715168	+	15.4	1000	Intergenic	Intergenic	-91609	NR_026970	285780	Hs.655737	NM_173675	ENSG00000216863	LY86-AS1	LY86-AS|LY86AS	LY86 antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr6-2258	chr6	7686514	7687514	+	13.4	1000	Intergenic	AluJr|SINE|Alu	-39318	NM_001718	654	Hs.285671	NM_001718	ENSG00000153162	BMP6	VGR|VGR1	bone morphogenetic protein 6	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr6-226	chr6	873072	874324	+	22.4	1252	"intron (NR_110853, intron 1 of 2)"	"intron (NR_110853, intron 1 of 2)"	5200	NR_110853	101927691	Hs.552556	NR_110853		LOC101927691	-	uncharacterized LOC101927691	ncRNA	22.4	3.88	5.773195876	2.53E-08
chr6-2262	chr6	7798740	7799740	+	15.4	1000	"intron (NM_001718, intron 1 of 6)"	"intron (NM_001718, intron 1 of 6)"	72908	NM_001718	654	Hs.285671	NM_001718	ENSG00000153162	BMP6	VGR|VGR1	bone morphogenetic protein 6	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr6-2264	chr6	8211361	8212361	+	14.7	1000	Intergenic	Intergenic	-109033	NM_004280	9521	Hs.602353	NM_004280	ENSG00000124802	EEF1E1	AIMP3|P18	eukaryotic translation elongation factor 1 epsilon 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr6-2265	chr6	8241991	8242991	+	14.7	1000	Intergenic	Intergenic	-139663	NM_004280	9521	Hs.602353	NM_004280	ENSG00000124802	EEF1E1	AIMP3|P18	eukaryotic translation elongation factor 1 epsilon 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr6-2268	chr6	10393315	10400129	+	92.8	6814	TTS (NM_003220)	TTS (NM_003220)	-15829	NR_033910	100130275	Hs.661431	NR_033910		TFAP2A-AS1	-	TFAP2A antisense RNA 1	ncRNA	92.81	19.9	4.663819095	2.29E-25
chr6-2269	chr6	10426183	10427183	+	12.8	1000	Intergenic	Intergenic	-6886	NM_001042425	7020	Hs.519880	NM_003220	ENSG00000137203	TFAP2A	AP-2|AP-2alpha|AP2TF|BOFS|TFAP2	transcription factor AP-2 alpha	protein-coding	12.8	1.94	6.597938144	4.51E-06
chr6-2270	chr6	10522327	10523327	+	14.7	1000	"intron (NM_145649, intron 1 of 4)"	"intron (NM_145649, intron 1 of 4)"	1259	NM_145649	2651	Hs.519884	NM_001491	ENSG00000111846	GCNT2	CCAT|CTRCT13|GCNT2C|GCNT5|IGNT|II|NACGT1|NAGCT1|ULG3|bA360O19.2|bA421M1.1	"glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr6-2273	chr6	11668773	11669773	+	15.4	1000	Intergenic	LTR22A|LTR|ERVK	110007	NM_001143948	84830	Hs.126409	NM_032744	ENSG00000111863	ADTRP	AIG1L|C6orf105|dJ413H6.1	androgen dependent TFPI regulating protein	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr6-2275	chr6	11865514	11866514	+	14.7	1000	Intergenic	MER82|DNA|TcMar-Tigger	-86734	NM_032744	84830	Hs.126409	NM_032744	ENSG00000111863	ADTRP	AIG1L|C6orf105|dJ413H6.1	androgen dependent TFPI regulating protein	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr6-228	chr6	2982306	2983306	+	20.5	1000	Intergenic	MER31A|LTR|ERV1	-5395	NR_026856	401232	Hs.720158	NM_207495		LINC01011	-	long intergenic non-protein coding RNA 1011	ncRNA	20.48	4.85	4.222680412	2.52E-06
chr6-2289	chr6	15845885	15846885	+	14.7	1000	Intergenic	Intergenic	-183096	NM_001271669	84062	Hs.571148	NM_032122	ENSG00000047579	DTNBP1	BLOC1S8|DBND|HPS7|My031|SDY	dystrobrevin binding protein 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr6-2290	chr6	15918281	15920871	+	36.5	2590	Intergenic	L2a|LINE|L2	-209741	NM_013262	29116	Hs.484738	NM_013262	ENSG00000007944	MYLIP	IDOL|MIR	myosin regulatory light chain interacting protein	protein-coding	36.48	5.82	6.268041237	1.09E-13
chr6-2294	chr6	16201427	16202427	+	16.6	1000	Intergenic	Intergenic	-36884	NM_006877	2766	Hs.484741	NM_006877	ENSG00000137198	GMPR	GMPR 1|GMPR1	guanosine monophosphate reductase	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr6-2296	chr6	16329698	16330698	+	14.1	1000	"intron (NM_001128164, intron 6 of 7)"	"intron (NM_001128164, intron 6 of 7)"	91387	NM_006877	2766	Hs.484741	NM_006877	ENSG00000137198	GMPR	GMPR 1|GMPR1	guanosine monophosphate reductase	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr6-2298	chr6	17466575	17467575	+	15.4	1000	"intron (NM_006366, intron 4 of 12)"	MLT1I|LTR|ERVL-MaLR	44421	NR_110855	101928491	Hs.622876	NR_110855		LOC101928491	-	uncharacterized LOC101928491	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr6-2300	chr6	17553208	17554208	+	14.7	1000	"intron (NM_006366, intron 12 of 12)"	AluSc8|SINE|Alu	-42212	NR_110855	101928491	Hs.622876	NR_110855		LOC101928491	-	uncharacterized LOC101928491	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr6-2301	chr6	17831738	17832738	+	15.4	1000	"intron (NM_022113, intron 12 of 38)"	L2a|LINE|L2	124964	NR_134618	105374952	Hs.718703	NR_134616	ENSG00000272269	LOC105374952	-	uncharacterized LOC105374952	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr6-2303	chr6	18454751	18456055	+	20.5	1304	"intron (NM_182757, intron 4 of 7)"	"intron (NM_182757, intron 4 of 7)"	67822	NM_182757	255488	Hs.148741	NM_182757	ENSG00000137393	RNF144B	IBRDC2|PIR2|bA528A10.3|p53RFP	ring finger protein 144B	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr6-2310	chr6	24322652	24323652	+	14.1	1000	"intron (NM_016356, intron 2 of 9)"	MER4E|LTR|ERV1	-33979	NM_181337	353219	Hs.697888	NM_181337	ENSG00000146049	KAAG1	RU2AS	kidney associated antigen 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr6-2311	chr6	27278502	27280626	+	34.6	2124	"exon (NM_033482, exon 1 of 1)"	"exon (NM_033482, exon 1 of 1)"	447	NM_033482	94026	Hs.729955	NM_033482	ENSG00000158553	POM121L2	POM121-L|POM121L	POM121 transmembrane nucleoporin like 2	protein-coding	34.56	3.88	8.907216495	5.09E-17
chr6-2313	chr6	27284684	27285684	+	14.7	1000	Intergenic	L1M4b|LINE|L1	-5173	NM_033482	94026	Hs.729955	NM_033482	ENSG00000158553	POM121L2	POM121-L|POM121L	POM121 transmembrane nucleoporin like 2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr6-2317	chr6	33714088	33717300	+	41.6	3212	promoter-TSS (NM_001142883)	promoter-TSS (NM_001142883)	-932	NM_001142883	117283	Hs.17253	NM_054111	ENSG00000161896	IP6K3	IHPK3|INSP6K3	inositol hexakisphosphate kinase 3	protein-coding	41.61	8.74	4.760869565	2.55E-12
chr6-2319	chr6	33798000	33799000	+	14.7	1000	Intergenic	Intergenic	-26707	NM_002418	4295	Hs.2813	NM_002418	ENSG00000096395	MLN	-	motilin	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr6-2322	chr6	34076820	34077820	+	14.1	1000	"intron (NM_001256809, intron 1 of 8)"	"intron (NM_001256809, intron 1 of 8)"	1220	NM_001256812	2914	Hs.429018	NM_000841	ENSG00000124493	GRM4	GPRC1D|MGLUR4|mGlu4	glutamate metabotropic receptor 4	protein-coding	14.08	0	14.5040551	3.99E-13
chr6-2324	chr6	34120767	34122103	+	20.5	1336	"intron (NM_001256809, intron 1 of 8)"	AluSx|SINE|Alu	1964	NM_001256809	2914	Hs.429018	NM_000841	ENSG00000124493	GRM4	GPRC1D|MGLUR4|mGlu4	glutamate metabotropic receptor 4	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr6-2333	chr6	36352774	36353774	+	16.6	1000	"intron (NM_001207040, intron 1 of 6)"	"intron (NM_001207040, intron 1 of 6)"	2294	NM_001207038	51513	Hs.272398	NM_016135	ENSG00000010030	ETV7	TEL-2|TEL2|TELB	ETS variant 7	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr6-2338	chr6	37532082	37533383	+	19.2	1301	Intergenic	L2c|LINE|L2	-9534	NR_039669	100616413		NR_039669	ENSG00000263926	MIR4462	-	microRNA 4462	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr6-2343	chr6	37598507	37599507	+	14.1	1000	Intergenic	Intergenic	66759	NM_153487	266727	Hs.437993	NM_153487	ENSG00000112139	MDGA1	GPIM|MAMDC3	MAM domain containing glycosylphosphatidylinositol anchor 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr6-2347	chr6	38747617	38748617	+	14.1	1000	"intron (NM_001206927, intron 15 of 92)"	L1PA13|LINE|L1	65000	NM_001206927	1769	Hs.520106	NM_001371	ENSG00000124721	DNAH8	ATPase|hdhc9	dynein axonemal heavy chain 8	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr6-2348	chr6	38824042	38825042	+	14.7	1000	"intron (NM_001206927, intron 41 of 92)"	LTR84a|LTR|ERVL	96341	NR_038401	100131047	Hs.670957	NR_038401		LOC100131047	-	uncharacterized LOC100131047	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr6-2349	chr6	38857791	38859119	+	19.2	1328	"exon (NM_001206927, exon 58 of 93)"	"exon (NM_001206927, exon 58 of 93)"	62428	NR_038401	100131047	Hs.670957	NR_038401		LOC100131047	-	uncharacterized LOC100131047	ncRNA	19.2	0	19.77825696	2.52E-19
chr6-2353	chr6	39344101	39345101	+	14.7	1000	"intron (NM_001289020, intron 15 of 21)"	"intron (NM_001289020, intron 15 of 21)"	-54271	NM_001135106	83795	Hs.287765	NM_032115	ENSG00000095981	KCNK16	K2p16.1|TALK-1|TALK1	potassium two pore domain channel subfamily K member 16	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr6-2354	chr6	39356733	39357733	+	14.7	1000	"intron (NM_145027, intron 15 of 22)"	L2a|LINE|L2	41917	NM_001289024	221458	Hs.588202	NM_145027	ENSG00000164627	KIF6	C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1	kinesin family member 6	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr6-2356	chr6	39987533	39988533	+	14.1	1000	Intergenic	Intergenic	-85743	NR_033233	4337	Hs.357128	NM_005942	ENSG00000124615	MOCS1	MIG11|MOCOD|MOCODA	molybdenum cofactor synthesis 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr6-2359	chr6	40132082	40133082	+	14.7	1000	Intergenic	MER5A|DNA|hAT-Charlie	191163	NR_038887	401260	Hs.654837	NM_001001705		LINC00951	-	long intergenic non-protein coding RNA 951	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr6-2365	chr6	40578854	40579854	+	15.4	1000	Intergenic	Intergenic	-24151	NM_020737	57497	Hs.250015	NM_020737	ENSG00000156564	LRFN2	FIGLER2|KIAA1246|SALM1	leucine rich repeat and fibronectin type III domain containing 2	protein-coding	15.36	0	15.82260557	1.26E-14
chr6-2366	chr6	40731045	40732045	+	15.4	1000	Intergenic	Intergenic	-176342	NM_020737	57497	Hs.250015	NM_020737	ENSG00000156564	LRFN2	FIGLER2|KIAA1246|SALM1	leucine rich repeat and fibronectin type III domain containing 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-2367	chr6	40776318	40777318	+	14.1	1000	Intergenic	AluSc8|SINE|Alu	214201	NR_110873	101929555	Hs.552555	NR_110873		LOC101929555	-	uncharacterized LOC101929555	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr6-2369	chr6	40823095	40824647	+	24.3	1552	Intergenic	Intergenic	167148	NR_110873	101929555	Hs.552555	NR_110873		LOC101929555	-	uncharacterized LOC101929555	ncRNA	24.32	0.97	25.07216495	2.01E-20
chr6-2372	chr6	41241094	41242094	+	15.4	1000	"3' UTR (NM_001242590, exon 3 of 3)"	"3' UTR (NM_001242590, exon 3 of 3)"	12889	NM_001242590	54210	Hs.283022	NM_018643	ENSG00000124731	TREM1	CD354|TREM-1	triggering receptor expressed on myeloid cells 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr6-2376	chr6	41295516	41296516	+	14.1	1000	Intergenic	Intergenic	-7512	NM_004828	9436	Hs.194721	NM_004828	ENSG00000096264	NCR2	CD336|LY95|NK-p44|NKP44|dJ149M18.1	natural cytotoxicity triggering receptor 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr6-2379	chr6	41356196	41357196	+	14.7	1000	Intergenic	HAL1|LINE|L1	53168	NM_001199510	9436	Hs.194721	NM_004828	ENSG00000096264	NCR2	CD336|LY95|NK-p44|NKP44|dJ149M18.1	natural cytotoxicity triggering receptor 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr6-2383	chr6	41645877	41646877	+	14.1	1000	Intergenic	Intergenic	40182	NM_001300805	4188	Hs.520119	NM_005586	ENSG00000112559	MDFI	I-MF|I-mfa	MyoD family inhibitor	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr6-2386	chr6	43242554	43244696	+	33.3	2142	"intron (NM_032538, intron 13 of 14)"	CpG	-22373	NM_006672	10864	Hs.485438	NM_006672	ENSG00000137204	SLC22A7	NLT|OAT2	solute carrier family 22 member 7	protein-coding	33.28	7.28	4.571428571	4.51E-10
chr6-2389	chr6	43714923	43716253	+	19.8	1330	Intergenic	Intergenic	-22358	NM_001171630	7422	Hs.73793	NM_003376	ENSG00000112715	VEGFA	MVCD1|VEGF|VPF	vascular endothelial growth factor A	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr6-239	chr6	52039334	52040592	+	24.3	1258	Intergenic	Intergenic	-11222	NM_002190	3605	Hs.41724	NM_002190	ENSG00000112115	IL17A	CTLA-8|CTLA8|IL-17|IL-17A|IL17	interleukin 17A	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr6-2393	chr6	43935254	43936519	+	17.9	1265	Intergenic	MIRb|SINE|MIR	-32451	NM_001171992	221416	Hs.531926	NM_153246	ENSG00000181577	C6orf223	-	chromosome 6 open reading frame 223	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr6-2401	chr6	44441581	44442581	+	14.7	1000	Intergenic	Intergenic	38703	NR_039785	100616352		NR_039785	ENSG00000266619	MIR4642	-	microRNA 4642	ncRNA	14.72	0.49	30.04081633	3.99E-13
chr6-2408	chr6	45434200	45438469	+	69.1	4269	"intron (NM_001015051, intron 5 of 7)"	MER20B|DNA|hAT-Charlie	46020	NM_001278478	860	Hs.535845	NM_004348	ENSG00000124813	RUNX2	AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA	runt related transcription factor 2	protein-coding	69.13	11.65	5.933905579	3.55E-24
chr6-241	chr6	108055321	108057097	+	36.5	1776	"intron (NM_198081, intron 5 of 7)"	AluSx|SINE|Alu	-2609	NM_001286409	256380	Hs.486109	NM_198081	ENSG00000146285	SCML4	dJ47M23.1	sex comb on midleg-like 4 (Drosophila)	protein-coding	36.48	3.88	9.402061856	5.49E-18
chr6-2417	chr6	45505797	45506797	+	14.7	1000	"intron (NM_001015051, intron 7 of 7)"	"intron (NM_001015051, intron 7 of 7)"	115983	NM_001278478	860	Hs.535845	NM_004348	ENSG00000124813	RUNX2	AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA	runt related transcription factor 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr6-242	chr6	108144463	108145721	+	23	1258	"intron (NM_198081, intron 1 of 7)"	"intron (NM_198081, intron 1 of 7)"	429	NM_001286408	256380	Hs.486109	NM_198081	ENSG00000146285	SCML4	dJ47M23.1	sex comb on midleg-like 4 (Drosophila)	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr6-2421	chr6	45667168	45668168	+	15.4	1000	Intergenic	Intergenic	237666	NR_045674	53405	Hs.485489	NM_016929	ENSG00000112782	CLIC5	DFNB102|DFNB103|MST130|MSTP130	chloride intracellular channel 5	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr6-2426	chr6	45924032	45925032	+	14.7	1000	"intron (NM_001114086, intron 1 of 5)"	"intron (NM_001114086, intron 1 of 5)"	-19198	NR_045673	53405	Hs.485489	NM_016929	ENSG00000112782	CLIC5	DFNB102|DFNB103|MST130|MSTP130	chloride intracellular channel 5	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr6-2429	chr6	46363370	46364977	+	23	1607	"intron (NM_001251973, intron 2 of 4)"	"intron (NM_001251973, intron 2 of 4)"	-70544	NM_005822	10231	Hs.440168	NM_005822	ENSG00000172348	RCAN2	CSP2|DSCR1L1|MCIP2|RCN2|ZAKI-4|ZAKI4	regulator of calcineurin 2	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr6-2430	chr6	46630551	46631551	+	14.1	1000	"intron (NM_001204052, intron 4 of 6)"	"intron (NM_001204052, intron 4 of 6)"	10399	NM_001204051	9481	Hs.40510	NM_004277	ENSG00000153291	SLC25A27	UCP4	solute carrier family 25 member 27	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr6-2436	chr6	50786478	50787478	+	14.1	1000	"intron (NM_003221, intron 1 of 6)"	"intron (NM_003221, intron 1 of 6)"	539	NM_003221	7021	Hs.33102	NM_003221	ENSG00000008196	TFAP2B	AP-2B|AP2-B|PDA2	transcription factor AP-2 beta	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr6-2444	chr6	52001874	52002874	+	17.9	1000	Intergenic	Intergenic	-6773	NR_029713	406989		NR_029713	ENSG00000207604	MIR206	MIRN206|miRNA206|mir-206	microRNA 206	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr6-2446	chr6	52006538	52008483	+	29.4	1945	Intergenic	Intergenic	-1637	NR_029713	406989		NR_029713	ENSG00000207604	MIR206	MIRN206|miRNA206|mir-206	microRNA 206	ncRNA	29.44	4.85	6.070103093	2.13E-11
chr6-2449	chr6	52015416	52016416	+	15.4	1000	promoter-TSS (NR_131248)	promoter-TSS (NR_131248)	-95	NR_131248	101154644	Hs.582788	NR_131248		LINCMD1	LINC-MD1|MIR133BHG	"long intergenic non-protein coding RNA, muscle differentiation 1"	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr6-246	chr6	122930671	122933257	+	57.6	2586	"intron (NM_181795, intron 1 of 4)"	"intron (NM_181795, intron 1 of 4)"	587	NM_181795	5570	Hs.741340	NM_032471	ENSG00000135549	PKIB	PRKACN2	cAMP-dependent protein kinase inhibitor beta	protein-coding	57.61	3.88	14.84793814	2.09E-36
chr6-2464	chr6	53573452	53574956	+	23	1504	Intergenic	Intergenic	-43698	NM_001003760	401265	Hs.131064	NM_001003760	ENSG00000124743	KLHL31	BKLHD6|KBTBD1|KLHL|bA345L23.2	kelch like family member 31	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr6-2465	chr6	53835978	53836978	+	15.4	1000	"intron (NR_125842, intron 1 of 3)"	"intron (NR_125842, intron 1 of 3)"	-27210	NR_046832	100874282	Hs.571169	NR_046832	ENSG00000236996	MLIP-IT1	-	MLIP intronic transcript 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr6-2469	chr6	70096831	70098084	+	17.9	1253	"intron (NM_001704, intron 31 of 31)"	(TTTTTG)n|Simple_repeat|Simple_repeat	409592	NM_018368	55788	Hs.271643	NM_018368	ENSG00000168216	LMBRD1	C6orf209|LMBD1|MAHCF|NESI	LMBR1 domain containing 1	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr6-247	chr6	126066531	126071263	+	90.3	4732	Intergenic	CpG	-1835	NM_012259	23493	Hs.144287	NM_012259	ENSG00000135547	HEY2	CHF1|GRIDLOCK|GRL|HERP1|HESR2|HRT2|bHLHb32	hes related family bHLH transcription factor with YRPW motif 2	protein-coding	90.25	21.36	4.225187266	2.24E-22
chr6-2470	chr6	72676169	72677169	+	15.4	1000	"intron (NM_014989, intron 1 of 33)"	"intron (NM_014989, intron 1 of 33)"	80263	NM_014989	22999	Hs.485729	NM_014989	ENSG00000079841	RIMS1	CORD7|RAB3IP2|RIM|RIM1	regulating synaptic membrane exocytosis 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-2471	chr6	74018720	74019720	+	14.7	1000	"intron (NR_027005, intron 2 of 4)"	"intron (NR_027005, intron 2 of 4)"	718	NM_001251874	80759	Hs.433062	NM_030568	ENSG00000135314	KHDC1	C6orf147|C6orf148|Em:AC019205.8|NDG1|bA257K9.4	KH homology domain containing 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr6-2472	chr6	74070748	74071748	+	14.7	1000	Intergenic	AluJb|SINE|Alu	-1152	NM_001017361	154288	Hs.128326	NM_001017361	ENSG00000203908	KHDC3L	C6orf221|ECAT1|HYDM2	"KH domain containing 3 like, subcortical maternal complex member"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr6-2476	chr6	75845581	75846581	+	14.1	1000	"intron (NM_080645, intron 16 of 50)"	"intron (NM_080645, intron 16 of 50)"	69542	NM_080645	1303	Hs.101302	NM_004370	ENSG00000111799	COL12A1	BA209D8.1|BTHLM2|COL12A1L|DJ234P15.1|UCMD2	collagen type XII alpha 1 chain	protein-coding	14.08	0.49	28.73469388	3.99E-13
chr6-2477	chr6	76644965	76645965	+	14.1	1000	"intron (NM_001563, intron 14 of 16)"	ORSL|DNA|hAT-Tip100	136930	NM_001563	3617	Hs.590893	NM_001563	ENSG00000112706	IMPG1	GP147|IPM150|SPACR|VMD4	interphotoreceptor matrix proteoglycan 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr6-248	chr6	135214983	135215983	+	21.1	1000	Intergenic	Intergenic	55777	NM_170771	64577	Hs.486520	NM_022568	ENSG00000118514	ALDH8A1	ALDH12|DJ352A20.2	aldehyde dehydrogenase 8 family member A1	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr6-2481	chr6	89211891	89212891	+	14.7	1000	Intergenic	L4|LINE|RTE	36697	NR_110867	101928936	Hs.533080	NR_110867		LOC101928936	-	uncharacterized LOC101928936	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr6-2482	chr6	89827055	89828055	+	14.1	1000	"exon (NM_080743, exon 1 of 5)"	"exon (NM_080743, exon 1 of 5)"	245	NM_080743	135295	Hs.254414	NM_080743	ENSG00000154548	SRSF12	SFRS13B|SFRS19|SRrp35	serine and arginine rich splicing factor 12	protein-coding	14.08	0	14.5040551	3.99E-13
chr6-2483	chr6	90232137	90233453	+	19.2	1316	"intron (NM_014942, intron 1 of 15)"	"intron (NM_014942, intron 1 of 15)"	-39242	NM_001242811	22881	Hs.702213	NM_014942	ENSG00000135299	ANKRD6	-	ankyrin repeat domain 6	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr6-2486	chr6	91544735	91545735	+	14.1	1000	Intergenic	L2b|LINE|L2	-248215	NM_003188	6885	Hs.594838	NM_003188	ENSG00000135341	MAP3K7	CSCF|FMD2|MEKK7|TAK1|TGF1a	mitogen-activated protein kinase kinase kinase 7	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr6-2487	chr6	91864997	91865997	+	15.4	1000	Intergenic	LTR88c|LTR|Gypsy?	-365881	NR_039786	100616174		NR_039786	ENSG00000263734	MIR4643	-	microRNA 4643	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr6-2488	chr6	93757238	93758238	+	14.7	1000	Intergenic	Intergenic	371562	NM_001288630	2045	Hs.73962	NM_004440	ENSG00000135333	EPHA7	EHK-3|EHK3|EK11|HEK11	EPH receptor A7	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr6-2490	chr6	99417798	99418798	+	14.7	1000	Intergenic	Intergenic	-22416	NR_103836	26235	Hs.536850	NM_012160	ENSG00000112234	FBXL4	FBL4|FBL5|MTDPS13	F-box and leucine rich repeat protein 4	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr6-2492	chr6	99511914	99512914	+	14.1	1000	Intergenic	Intergenic	-60071	NR_039672	100616347		NR_039672	ENSG00000265226	MIR548AI	-	microRNA 548ai	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr6-2499	chr6	105945418	105946418	+	14.1	1000	Intergenic	L1ME3C|LINE|L1	-94919	NM_002726	5550	Hs.436564	NM_002726	ENSG00000085377	PREP	PE|PEP	prolyl endopeptidase	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr6-2503	chr6	106566836	106567836	+	13.4	1000	Intergenic	Intergenic	20599	NM_182907	639	Hs.436023	NM_001198	ENSG00000057657	PRDM1	BLIMP1|PRDI-BF1	PR/SET domain 1	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr6-2506	chr6	107808873	107809873	+	14.7	1000	Intergenic	Intergenic	-1944	NM_018013	55084	Hs.445244	NM_018013	ENSG00000112320	SOBP	JXC1|MRAMS	sine oculis binding protein homolog	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr6-2507	chr6	108013840	108015118	+	19.2	1278	Intergenic	AluSc|SINE|Alu	39121	NM_001286409	256380	Hs.486109	NM_198081	ENSG00000146285	SCML4	dJ47M23.1	sex comb on midleg-like 4 (Drosophila)	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr6-2511	chr6	108065319	108071648	+	103.7	6329	"intron (NM_198081, intron 3 of 7)"	"intron (NM_198081, intron 3 of 7)"	-14883	NM_001286409	256380	Hs.486109	NM_198081	ENSG00000146285	SCML4	dJ47M23.1	sex comb on midleg-like 4 (Drosophila)	protein-coding	103.69	16.5	6.284242424	4.43E-37
chr6-2516	chr6	108098202	108099202	+	15.4	1000	"intron (NM_198081, intron 1 of 7)"	"intron (NM_198081, intron 1 of 7)"	-45102	NM_001286409	256380	Hs.486109	NM_198081	ENSG00000146285	SCML4	dJ47M23.1	sex comb on midleg-like 4 (Drosophila)	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr6-2517	chr6	108131195	108132195	+	14.7	1000	"intron (NM_198081, intron 1 of 7)"	"intron (NM_198081, intron 1 of 7)"	13826	NM_001286408	256380	Hs.486109	NM_198081	ENSG00000146285	SCML4	dJ47M23.1	sex comb on midleg-like 4 (Drosophila)	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr6-2518	chr6	108164238	108165238	+	14.7	1000	Intergenic	Intergenic	-19217	NM_198081	256380	Hs.486109	NM_198081	ENSG00000146285	SCML4	dJ47M23.1	sex comb on midleg-like 4 (Drosophila)	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr6-2525	chr6	109090069	109091547	+	21.1	1478	"intron (NR_033376, intron 4 of 4)"	MLT1K|LTR|ERVL-MaLR	17951	NR_033376	387111	Hs.520310	NR_033376	ENSG00000203801	LINC00222	C6orf181|NCRNA00222|dJ354J5.2	long intergenic non-protein coding RNA 222	ncRNA	21.12	3.4	6.211764706	2.41E-08
chr6-2527	chr6	110213149	110214149	+	15.4	1000	Intergenic	HERV3-int|LTR|ERV1	-85810	NM_005284	2830	Hs.46332	NM_005284	ENSG00000146360	GPR6	-	G protein-coupled receptor 6	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr6-2529	chr6	110386068	110387438	+	19.8	1370	Intergenic	L2b|LINE|L2	87294	NM_001286099	2830	Hs.46332	NM_005284	ENSG00000146360	GPR6	-	G protein-coupled receptor 6	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr6-253	chr6	156872902	156873902	+	19.8	1000	Intergenic	MLT1E3|LTR|ERVL-MaLR	-225587	NM_001346813	57492	Hs.291587	NM_017519	ENSG00000049618	ARID1B	6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R	AT-rich interaction domain 1B	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr6-2532	chr6	112338448	112339448	+	14.1	1000	Intergenic	Intergenic	-36330	NM_003880	8838	Hs.558428	NM_003880	ENSG00000112761	WISP3	CCN6|LIBC|PPAC|PPD|WISP-3	WNT1 inducible signaling pathway protein 3	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr6-2533	chr6	112504293	112505293	+	13.4	1000	"intron (NM_001105206, intron 9 of 38)"	"intron (NM_001105206, intron 9 of 38)"	-53004	NR_121193	101927640	Hs.510007	NR_121193		LOC101927640	-	uncharacterized LOC101927640	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr6-2535	chr6	112609710	112610710	+	14.7	1000	"intron (NR_121193, intron 2 of 2)"	"intron (NR_121193, intron 2 of 2)"	-34293	NM_001105209	3910	Hs.654572	NM_002290	ENSG00000112769	LAMA4	CMD1JJ|LAMA3|LAMA4*-1	laminin subunit alpha 4	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr6-2539	chr6	116214904	116215904	+	15.4	1000	Intergenic	L2|LINE|L2	-144490	NR_027338	728402	Hs.729953	NR_027338		TPI1P3	-	triosephosphate isomerase 1 pseudogene 3	pseudo	15.36	0	15.82260557	1.26E-14
chr6-2542	chr6	123100777	123101777	+	15.4	1000	"intron (NM_001446, intron 1 of 3)"	"intron (NM_001446, intron 1 of 3)"	657	NM_001446	2173	Hs.26770	NM_001446	ENSG00000164434	FABP7	B-FABP|BLBP|FABPB|MRG	fatty acid binding protein 7	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-2543	chr6	125628055	125629055	+	14.7	1000	Intergenic	Intergenic	-5273	NM_016063	51020	Hs.32826	NM_016063	ENSG00000111906	HDDC2	C6orf74|CGI-130|NS5ATP2|dJ167O5.2	HD domain containing 2	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr6-2548	chr6	125730341	125731341	+	14.7	1000	Intergenic	THE1B|LTR|ERVL-MaLR	-107559	NM_016063	51020	Hs.32826	NM_016063	ENSG00000111906	HDDC2	C6orf74|CGI-130|NS5ATP2|dJ167O5.2	HD domain containing 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr6-2559	chr6	133957655	133958655	+	14.7	1000	"intron (NR_109982, intron 4 of 8)"	"intron (NR_109982, intron 4 of 8)"	-184130	NR_027030	154089	Hs.126165	NR_027030		LINC01312	-	long intergenic non-protein coding RNA 1312	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr6-2566	chr6	134943093	134944093	+	14.1	1000	Intergenic	Intergenic	-82450	NR_125855	101928304	Hs.555076	NR_125855		LOC101928304	-	uncharacterized LOC101928304	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr6-2576	chr6	136853461	136854461	+	14.7	1000	"intron (NM_001198616, intron 1 of 16)"	"intron (NM_001198616, intron 1 of 16)"	-6113	NM_001198619	9053	Hs.486548	NM_003980	ENSG00000135525	MAP7	E-MAP-115|EMAP115	microtubule associated protein 7	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr6-2579	chr6	136964614	136965614	+	15.4	1000	"intron (NM_005923, intron 11 of 29)"	"intron (NM_005923, intron 11 of 29)"	14862	NR_125858	101928461	Hs.666518	NR_125858		LOC101928461	-	uncharacterized LOC101928461	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr6-2580	chr6	137466679	137467679	+	14.7	1000	"intron (NM_181310, intron 4 of 4)"	AluSz|SINE|Alu	27606	NM_052962	116379	Hs.126891	NM_052962	ENSG00000164485	IL22RA2	CRF2-10|CRF2-S1|CRF2X|IL-22BP|IL-22R-alpha-2|IL-22RA2|ZCYTOR16	interleukin 22 receptor subunit alpha 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr6-2595	chr6	138507133	138508390	+	17.3	1257	"intron (NM_020340, intron 2 of 33)"	"intron (NM_020340, intron 2 of 33)"	24708	NM_020340	57221	Hs.194408	NM_020340	ENSG00000112379	ARFGEF3	A7322|BIG3|C6orf92|KIAA1244|PPP1R33|dJ171N11.1	ARFGEF family member 3	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr6-2597	chr6	138579031	138580031	+	14.1	1000	"intron (NM_020340, intron 10 of 33)"	MIRb|SINE|MIR	-39904	NM_021635	59351	Hs.302016	NM_021635	ENSG00000254440	PBOV1	UC28|UROC28|dJ171N11.2	prostate and breast cancer overexpressed 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr6-2601	chr6	138914659	138915659	+	14.7	1000	Intergenic	MER103C|DNA|hAT-Charlie	-21491	NM_020464	57224	Hs.652741	NM_020464	ENSG00000135540	NHSL1	C6orf63	NHS like 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr6-2605	chr6	139172297	139173297	+	14.7	1000	"intron (NM_001077706, intron 9 of 21)"	L1MB2|LINE|L1	55549	NM_001195037	345930	Hs.660603	NM_001077706	ENSG00000203734	ECT2L	ARHGEF32|C6orf91|FBXO49|LFDH|dJ509I19.2|dJ509I19.3|dJ509I19.5	epithelial cell transforming 2 like	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr6-2623	chr6	150331174	150332174	+	14.7	1000	Intergenic	MLT1E2|LTR|ERVL-MaLR	-5394	NR_024045	646024	Hs.560537	NR_024045	ENSG00000218358	RAET1K	-	retinoic acid early transcript 1K pseudogene	pseudo	14.72	2.91	5.058419244	2.67E-05
chr6-2626	chr6	150407631	150409161	+	23.7	1530	Intergenic	Intergenic	-18113	NM_024518	79465	Hs.15422	NM_024518	ENSG00000131019	ULBP3	N2DL-3|NKG2DL3|RAET1N	UL16 binding protein 3	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr6-2628	chr6	150446658	150447658	+	13.4	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	-17030	NM_030949	81706	Hs.486798	NM_030949	ENSG00000198729	PPP1R14C	CPI17-like|KEPI|NY-BR-81	protein phosphatase 1 regulatory inhibitor subunit 14C	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr6-2630	chr6	150496661	150499015	+	33.9	2354	"intron (NM_030949, intron 1 of 3)"	"intron (NM_030949, intron 1 of 3)"	33650	NM_030949	81706	Hs.486798	NM_030949	ENSG00000198729	PPP1R14C	CPI17-like|KEPI|NY-BR-81	protein phosphatase 1 regulatory inhibitor subunit 14C	protein-coding	33.92	5.82	5.828178694	4.04E-12
chr6-2631	chr6	150511984	150512984	+	15.4	1000	"intron (NM_030949, intron 1 of 3)"	L2a|LINE|L2	48296	NM_030949	81706	Hs.486798	NM_030949	ENSG00000198729	PPP1R14C	CPI17-like|KEPI|NY-BR-81	protein phosphatase 1 regulatory inhibitor subunit 14C	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr6-2635	chr6	150575116	150576116	+	14.7	1000	Intergenic	LTR40b|LTR|ERVL	111428	NM_030949	81706	Hs.486798	NM_030949	ENSG00000198729	PPP1R14C	CPI17-like|KEPI|NY-BR-81	protein phosphatase 1 regulatory inhibitor subunit 14C	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr6-2641	chr6	150665669	150666669	+	14.1	1000	Intergenic	AluSq2|SINE|Alu	-23859	NM_203395	389434	Hs.310225	NM_203395	ENSG00000009765	IYD	C6orf71|DEHAL1|IYD-1|TDH4	iodotyrosine deiodinase	protein-coding	14.08	0.49	28.73469388	3.99E-13
chr6-2642	chr6	150675620	150677091	+	20.5	1471	Intergenic	LTR64|LTR|ERV1	-13673	NM_203395	389434	Hs.310225	NM_203395	ENSG00000009765	IYD	C6orf71|DEHAL1|IYD-1|TDH4	iodotyrosine deiodinase	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr6-265	chr6	4360337	4364434	+	63.4	4097	Intergenic	L1MB3|LINE|L1	-65851	NR_106988	102465753		NR_106988	ENSG00000280494	MIR7641-2	B-ATF|hsa-mir-7641-2	microRNA 7641-2	ncRNA	63.37	11.65	5.439484979	2.20E-20
chr6-2651	chr6	152312168	152313168	+	14.1	1000	"intron (NM_001122740, intron 5 of 8)"	"intron (NM_001122740, intron 5 of 8)"	-157094	NR_036121	100423029		NR_036121	ENSG00000266423	MIR3163	-	microRNA 3163	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr6-2654	chr6	152655974	152657412	+	19.8	1438	"intron (NM_182961, intron 76 of 145)"	"intron (NM_182961, intron 76 of 145)"	-44972	NR_120501	100505475	Hs.571203	NR_120501		SYNE1-AS1	-	SYNE1 antisense RNA 1	ncRNA	19.84	1.94	10.22680412	9.57E-11
chr6-2657	chr6	154780288	154781850	+	24.3	1562	"intron (NM_173515, intron 1 of 12)"	"intron (NM_173515, intron 1 of 12)"	50684	NM_173515	154043	Hs.16064	NM_173515	ENSG00000153721	CNKSR3	MAGI1	CNKSR family member 3	protein-coding	24.32	1.94	12.53608247	5.33E-15
chr6-2661	chr6	157780797	157781797	+	15.4	1000	Intergenic	MLT1B|LTR|ERVL-MaLR	-21260	NM_153746	79683	Hs.596214	NM_024630	ENSG00000175048	ZDHHC14	NEW1CP	zinc finger DHHC-type containing 14	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr6-2663	chr6	157843428	157845948	+	35.8	2520	"intron (NM_153746, intron 1 of 8)"	"intron (NM_153746, intron 1 of 8)"	42131	NM_024630	79683	Hs.596214	NM_024630	ENSG00000175048	ZDHHC14	NEW1CP	zinc finger DHHC-type containing 14	protein-coding	35.84	5.82	6.158075601	1.09E-13
chr6-2667	chr6	157913811	157914811	+	14.7	1000	"intron (NM_153746, intron 1 of 8)"	"intron (NM_153746, intron 1 of 8)"	-35853	NR_037463	100500899		NR_037463	ENSG00000266617	MIR3692	-	microRNA 3692	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr6-2668	chr6	157932760	157934110	+	19.8	1350	"intron (NM_153746, intron 1 of 8)"	"intron (NM_153746, intron 1 of 8)"	-16729	NR_037463	100500899		NR_037463	ENSG00000266617	MIR3692	-	microRNA 3692	ncRNA	19.84	4.85	4.090721649	1.08E-05
chr6-2670	chr6	157976904	157977904	+	12.8	1000	"intron (NM_153746, intron 2 of 8)"	MIR|SINE|MIR	27240	NR_037463	100500899		NR_037463	ENSG00000266617	MIR3692	-	microRNA 3692	ncRNA	12.8	1.94	6.597938144	4.51E-06
chr6-2674	chr6	158054032	158055032	+	14.7	1000	"intron (NM_153746, intron 5 of 8)"	"intron (NM_153746, intron 5 of 8)"	104368	NR_037463	100500899		NR_037463	ENSG00000266617	MIR3692	-	microRNA 3692	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr6-2679	chr6	158128608	158129608	+	15.4	1000	Intergenic	LTR8A|LTR|ERV1	-115095	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-2682	chr6	158187075	158188075	+	15.4	1000	Intergenic	Intergenic	-56628	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-2693	chr6	159092024	159093024	+	14.7	1000	"intron (NM_001318745, intron 2 of 14)"	AluSz|SINE|Alu	8089	NM_001318745	94120	Hs.436977	NM_001009991	ENSG00000164674	SYTL3	SLP3	synaptotagmin like 3	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr6-2694	chr6	159469492	159470492	+	15.4	1000	Intergenic	Intergenic	-3808	NM_054114	117289	Hs.529984	NM_054114	ENSG00000164691	TAGAP	ARHGAP47|FKSG15|IDDM21|TAGAP1	T-cell activation RhoGTPase activating protein	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr6-2697	chr6	159633437	159635494	+	32.6	2057	"intron (NM_032532, intron 4 of 22)"	"intron (NM_032532, intron 4 of 22)"	-43426	NR_121668	101929122	Hs.134215	NR_121668		LOC101929122	-	uncharacterized LOC101929122	ncRNA	32.64	7.77	4.200772201	7.28E-09
chr6-2699	chr6	159806147	159808374	+	31.4	2227	"intron (NR_125873, intron 1 of 2)"	"intron (NR_125873, intron 1 of 2)"	2697	NR_125873	102724053	Hs.98463	NR_125873	ENSG00000234777	LOC102724053	-	uncharacterized LOC102724053	ncRNA	31.36	4.85	6.465979381	3.34E-12
chr6-2701	chr6	159868080	159869080	+	14.7	1000	Intergenic	Intergenic	64017	NR_125873	102724053	Hs.98463	NR_125873	ENSG00000234777	LOC102724053	-	uncharacterized LOC102724053	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr6-2710	chr6	160764746	160765746	+	14.7	1000	Intergenic	L1ME3C|LINE|L1	-4159	NM_021977	6581	Hs.567337	NM_021977	ENSG00000146477	SLC22A3	EMT|EMTH|OCT3	solute carrier family 22 member 3	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr6-2711	chr6	160840597	160841597	+	15.4	1000	"intron (NM_021977, intron 5 of 10)"	"intron (NM_021977, intron 5 of 10)"	71692	NM_021977	6581	Hs.567337	NM_021977	ENSG00000146477	SLC22A3	EMT|EMTH|OCT3	solute carrier family 22 member 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr6-2712	chr6	160859807	160860807	+	14.7	1000	"intron (NM_021977, intron 7 of 10)"	"intron (NM_021977, intron 7 of 10)"	71849	NR_028092	80350	Hs.654503	NM_024492	ENSG00000213071	LPAL2	APOA2|APOAL|APOARGC|apo(a)rg-C	"lipoprotein(a) like 2, pseudogene"	pseudo	14.72	1.94	7.587628866	6.14E-07
chr6-2714	chr6	161982522	161984700	+	37.8	2178	"intron (NM_013987, intron 7 of 10)"	L2b|LINE|L2	91602	NR_134594	105378098	Hs.691066	NR_134593		LOC105378098	-	uncharacterized LOC105378098	ncRNA	37.76	4.37	8.640732265	1.21E-17
chr6-2715	chr6	162755115	162756115	+	15.4	1000	"intron (NM_013987, intron 2 of 10)"	Tigger1|DNA|TcMar-Tigger	-392549	NM_001080378	135138	Hs.25791	NM_152410	ENSG00000112530	PACRG	GLUP|HAK005771|PARK2CRG	PARK2 coregulated	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-2717	chr6	163620719	163621719	+	14.7	1000	"intron (NM_001080379, intron 4 of 4)"	"intron (NM_001080379, intron 4 of 4)"	-8185	NR_122120	729658	Hs.728991	NR_122120		PACRG-AS3	-	PACRG antisense RNA 3	ncRNA	14.72	0.49	30.04081633	3.99E-13
chr6-2718	chr6	163819777	163820777	+	14.1	1000	Intergenic	MLT1J1|LTR|ERVL-MaLR	14705	NR_037593	100526820	Hs.644159	NR_037593	ENSG00000270419	CAHM	LINC00468	colon adenocarcinoma hypermethylated (non-protein coding)	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr6-2719	chr6	164065971	164066971	+	15.4	1000	Intergenic	Intergenic	26045	NR_134620	102724152	Hs.738183	NR_134620		LOC102724152	-	uncharacterized LOC102724152	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr6-2720	chr6	164147219	164148219	+	14.1	1000	Intergenic	MIRb|SINE|MIR	-55203	NR_134620	102724152	Hs.738183	NR_134620		LOC102724152	-	uncharacterized LOC102724152	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr6-2722	chr6	166116621	166117621	+	14.1	1000	Intergenic	L5|LINE|RTE	-41533	NM_001130690	10846	Hs.348762	NM_006661	ENSG00000112541	PDE10A	ADSD2|HSPDE10A|IOLOD|LINC00473|PDE10A19	phosphodiesterase 10A	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr6-2723	chr6	166186708	166187708	+	14.7	1000	Intergenic	Intergenic	-111620	NM_001130690	10846	Hs.348762	NM_006661	ENSG00000112541	PDE10A	ADSD2|HSPDE10A|IOLOD|LINC00473|PDE10A19	phosphodiesterase 10A	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr6-2728	chr6	166929691	166930691	+	14.7	1000	"intron (NM_001006932, intron 4 of 21)"	"intron (NM_001006932, intron 4 of 21)"	-7270	NR_031734	100302141		NR_031734	ENSG00000222958	MIR1913	MIRN1913|hsa-mir-1913	microRNA 1913	ncRNA	14.72	0	15.16333034	3.99E-13
chr6-2730	chr6	167034616	167035934	+	19.8	1318	"intron (NM_001006932, intron 2 of 21)"	"intron (NM_001006932, intron 2 of 21)"	5490	NM_021135	6196	Hs.655277	NM_021135	ENSG00000071242	RPS6KA2	HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3	ribosomal protein S6 kinase A2	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr6-2732	chr6	167064543	167065543	+	14.7	1000	"intron (NM_001006932, intron 2 of 21)"	"intron (NM_001006932, intron 2 of 21)"	-24278	NM_021135	6196	Hs.655277	NM_021135	ENSG00000071242	RPS6KA2	HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3	ribosomal protein S6 kinase A2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr6-2734	chr6	167131148	167132148	+	15.4	1000	"intron (NM_001006932, intron 2 of 21)"	"intron (NM_001006932, intron 2 of 21)"	-90883	NM_021135	6196	Hs.655277	NM_021135	ENSG00000071242	RPS6KA2	HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3	ribosomal protein S6 kinase A2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr6-2735	chr6	167275064	167276064	+	13.4	1000	"intron (NM_001006932, intron 1 of 21)"	"intron (NM_001006932, intron 1 of 21)"	475	NM_001318937	6196	Hs.655277	NM_021135	ENSG00000071242	RPS6KA2	HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3	ribosomal protein S6 kinase A2	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr6-2737	chr6	167567997	167568997	+	14.7	1000	Intergenic	Intergenic	2822	NM_005299	2853	Hs.248124	NM_005299	ENSG00000120436	GPR31	12-HETER|HETER|HETER1	G protein-coupled receptor 31	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr6-2738	chr6	167609878	167611197	+	19.8	1319	Intergenic	L1P3|LINE|L1	26456	NM_001145121	401285	Hs.691976	NM_001013683	ENSG00000166984	TCP10L2	bA517H2.3	t-complex 10-like 2	protein-coding	19.84	0	20.43753219	2.52E-19
chr6-2743	chr6	167690764	167691764	+	15.4	1000	Intergenic	HERV17-int|LTR|ERV1	-13539	NM_001143947	54346	Hs.567508	NM_018974	ENSG00000112494	UNC93A	Unc-93A|dJ366N23.1|dJ366N23.2	unc-93 homolog A (C. elegans)	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr6-2748	chr6	167851775	167853038	+	19.2	1263	Intergenic	L1MEc|LINE|L1	32607	NR_134591	105378127	Hs.58456	NR_134591		LOC105378127	-	uncharacterized LOC105378127	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr6-2750	chr6	167855069	167856376	+	23	1307	Intergenic	Intergenic	29291	NR_134591	105378127	Hs.58456	NR_134591		LOC105378127	-	uncharacterized LOC105378127	ncRNA	23.04	0.97	23.75257732	5.03E-19
chr6-2752	chr6	168169122	168170122	+	14.1	1000	Intergenic	Intergenic	27917	NR_026773	26238	Hs.520583	NM_014356	ENSG00000146521	LINC01558	C6orf123|HGC6.2|LINC01557|dJ431P23.4	long intergenic non-protein coding RNA 1558	ncRNA	14.08	0	14.5040551	3.99E-13
chr6-2754	chr6	168220317	168221317	+	14.7	1000	Intergenic	Intergenic	6659	NR_027906	653483	Hs.520556	NM_001042508	ENSG00000198221	AFDN-AS1	C6orf124|HGC6.4|MLLT4-AS1|dJ431P23.3	AFDN antisense RNA 1 (head to head)	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr6-2757	chr6	168647420	168648420	+	14.7	1000	"intron (NR_110870, intron 1 of 4)"	"intron (NR_110870, intron 1 of 4)"	4302	NR_110870	101929420	Hs.571211	NR_110870	ENSG00000234647	LOC101929420	-	uncharacterized LOC101929420	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr6-2759	chr6	168942126	168945460	+	42.9	3334	"intron (NM_001166412, intron 4 of 12)"	"intron (NM_001166412, intron 4 of 12)"	101962	NM_001166412	64094	Hs.487200	NM_022138	ENSG00000112562	SMOC2	DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1	SPARC related modular calcium binding 2	protein-coding	42.89	8.25	5.198787879	1.14E-13
chr6-2763	chr6	169067776	169068776	+	16	1000	"3' UTR (NM_022138, exon 13 of 13)"	"3' UTR (NM_022138, exon 13 of 13)"	226445	NM_001166412	64094	Hs.487200	NM_022138	ENSG00000112562	SMOC2	DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1	SPARC related modular calcium binding 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr6-2764	chr6	169101388	169102388	+	14.7	1000	Intergenic	Intergenic	260057	NM_001166412	64094	Hs.487200	NM_022138	ENSG00000112562	SMOC2	DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1	SPARC related modular calcium binding 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr6-2770	chr6	169358362	169359818	+	17.9	1456	"intron (NR_136250, intron 1 of 3)"	"intron (NR_136250, intron 1 of 3)"	5387	NR_136248	105378146	Hs.343631	NR_136248		LOC105378146	-	uncharacterized LOC105378146	ncRNA	17.92	0.49	36.57142857	9.96E-18
chr6-2772	chr6	169630458	169631758	+	16.6	1300	"intron (NM_003247, intron 14 of 22)"	"intron (NM_003247, intron 14 of 22)"	17801	NR_134621	101929523	Hs.442696	NR_134621	ENSG00000226445	LOC101929523	-	uncharacterized LOC101929523	ncRNA	16.64	0.49	33.95918367	3.68E-16
chr6-2779	chr6	170331696	170333533	+	26.2	1837	Intergenic	Intergenic	-133693	NR_026781	401288	Hs.556095	NM_207502	ENSG00000229214	LINC00242	C6orf122|NCRNA00242|dJ266L20.5	long intergenic non-protein coding RNA 242	ncRNA	26.24	3.4	7.717647059	9.95E-12
chr6-2781	chr6	170384578	170385578	+	15.4	1000	Intergenic	L1ME1|LINE|L1	-90788	NR_125878	102724511	Hs.550045	NR_125878		LOC102724511	-	uncharacterized LOC102724511	ncRNA	15.36	0	15.82260557	1.26E-14
chr6-2782	chr6	170443737	170445230	+	19.2	1493	Intergenic	Intergenic	-31383	NR_125878	102724511	Hs.550045	NR_125878		LOC102724511	-	uncharacterized LOC102724511	ncRNA	19.2	0.97	19.79381443	5.65E-15
chr6-2783	chr6	170465212	170467642	+	32	2430	Intergenic	Intergenic	-9439	NR_125878	102724511	Hs.550045	NR_125878		LOC102724511	-	uncharacterized LOC102724511	ncRNA	32	3.88	8.24742268	3.92E-15
chr6-2785	chr6	170560978	170561978	+	14.1	1000	Intergenic	Intergenic	10179	NR_002787	154449	Hs.447751	NR_002787	ENSG00000230960	LOC154449	-	uncharacterized LOC154449	ncRNA	14.08	1.46	9.643835616	3.66E-08
chr6-2786	chr6	170597711	170606616	+	166.4	8905	"intron (NM_001286379, intron 1 of 10)"	"intron (NM_001286379, intron 1 of 10)"	-2246	NM_001286380	84498	Hs.369522	NM_032448	ENSG00000112584	FAM120B	CCPG|KIAA1838|PGCC1|dJ894D12.1	family with sequence similarity 120B	protein-coding	166.42	17.47	9.526044648	7.50E-79
chr6-284	chr6	69343358	69344624	+	23.7	1266	"intron (NR_125872, intron 1 of 1)"	"intron (NR_125872, intron 1 of 1)"	225	NR_125872	101928307	Hs.535825	NR_125872	ENSG00000230910	LOC101928307	-	uncharacterized LOC101928307	ncRNA	23.68	5.34	4.434456929	4.49E-07
chr6-287	chr6	86158706	86160654	+	46.1	1948	"5' UTR (NM_002526, exon 1 of 9)"	"5' UTR (NM_002526, exon 1 of 9)"	378	NM_002526	4907	Hs.153952	NM_002526	ENSG00000135318	NT5E	CALJA|CD73|E5NT|NT|NT5|NTE|eN|eNT	5'-nucleotidase ecto	protein-coding	46.09	7.77	5.931788932	1.14E-16
chr6-288	chr6	100035492	100039835	+	64.6	4343	Intergenic	Intergenic	-16987	NM_021620	59336	Hs.287386	NM_021620	ENSG00000112238	PRDM13	MU-MB-20.220|PFM10	PR/SET domain 13	protein-coding	64.65	14.56	4.440247253	3.04E-17
chr6-291	chr6	108438585	108445226	+	115.9	6641	Intergenic	Intergenic	-45357	NM_003269	7101	Hs.157688	NM_003269	ENSG00000112333	NR2E1	TLL|TLX|XTLL	nuclear receptor subfamily 2 group E member 1	protein-coding	115.85	20.39	5.681706719	1.52E-37
chr6-292	chr6	108496311	108497311	+	21.1	1000	"intron (NM_003269, intron 3 of 8)"	CpG	7584	NM_001286102	7101	Hs.157688	NM_003269	ENSG00000112333	NR2E1	TLL|TLX|XTLL	nuclear receptor subfamily 2 group E member 1	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr6-294	chr6	125717475	125718728	+	21.8	1253	Intergenic	L1PA5|LINE|L1	-94819	NM_016063	51020	Hs.32826	NM_016063	ENSG00000111906	HDDC2	C6orf74|CGI-130|NS5ATP2|dJ167O5.2	HD domain containing 2	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr6-307	chr6	157851383	157852383	+	19.8	1000	"intron (NM_153746, intron 1 of 8)"	"intron (NM_153746, intron 1 of 8)"	49326	NM_024630	79683	Hs.596214	NM_024630	ENSG00000175048	ZDHHC14	NEW1CP	zinc finger DHHC-type containing 14	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr6-309	chr6	158041189	158042801	+	30.7	1612	"intron (NM_153746, intron 3 of 8)"	MIRb|SINE|MIR	91831	NR_037463	100500899		NR_037463	ENSG00000266617	MIR3692	-	microRNA 3692	ncRNA	30.72	3.4	9.035294118	1.89E-15
chr6-311	chr6	158100557	158101810	+	24.3	1253	Intergenic	Intergenic	-143020	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	24.32	4.37	5.565217391	4.38E-09
chr6-314	chr6	159590924	159591924	+	19.8	1000	promoter-TSS (NR_121668)	promoter-TSS (NR_121668)	-385	NR_121668	101929122	Hs.134215	NR_121668		LOC101929122	-	uncharacterized LOC101929122	ncRNA	19.84	1.94	10.22680412	9.57E-11
chr6-323	chr6	1144076	1145861	+	33.3	1785	Intergenic	Intergenic	-43401	NR_027115	285768	Hs.209463	NR_027115		LINC01622	-	long intergenic non-protein coding RNA 1622	ncRNA	33.28	5.82	5.718213058	4.04E-12
chr6-326	chr6	2872693	2875978	+	49.9	3285	"intron (NR_033851, intron 1 of 1)"	MIR|SINE|MIR	2409	NR_033851	221756	Hs.8162	NM_182544		SERPINB9P1	SERPINB9P	serpin family B member 9 pseudogene 1	pseudo	49.93	11.16	4.474014337	4.90E-14
chr6-328	chr6	4159746	4160746	+	19.8	1000	Intergenic	Intergenic	23940	NR_103764	100507506	Hs.665936	NR_103764	ENSG00000234817	LOC100507506	-	uncharacterized LOC100507506	ncRNA	19.84	4.37	4.540045767	3.16E-06
chr6-329	chr6	6740766	6741766	+	20.5	1000	Intergenic	Intergenic	-118207	NR_026970	285780	Hs.655737	NM_173675	ENSG00000216863	LY86-AS1	LY86-AS|LY86AS	LY86 antisense RNA 1	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr6-330	chr6	7725292	7731425	+	104.3	6133	"intron (NM_001718, intron 1 of 6)"	"intron (NM_001718, intron 1 of 6)"	2026	NM_001718	654	Hs.285671	NM_001718	ENSG00000153162	BMP6	VGR|VGR1	bone morphogenetic protein 6	protein-coding	104.33	16.5	6.323030303	4.43E-37
chr6-337	chr6	39014889	39017149	+	39.7	2260	promoter-TSS (NM_002062)	promoter-TSS (NM_002062)	-538	NR_136563	2740	Hs.351883	NM_002062	ENSG00000112164	GLP1R	GLP-1|GLP-1-R|GLP-1R	glucagon like peptide 1 receptor	protein-coding	39.69	4.37	9.082379863	1.50E-19
chr6-340	chr6	40240032	40241309	+	23.7	1277	Intergenic	MSTD-int|LTR|ERVL-MaLR	83075	NR_038887	401260	Hs.654837	NM_001001705		LINC00951	-	long intergenic non-protein coding RNA 951	ncRNA	23.68	3.4	6.964705882	5.45E-10
chr6-342	chr6	40555551	40556551	+	20.5	1000	promoter-TSS (NM_020737)	promoter-TSS (NM_020737)	-848	NM_020737	57497	Hs.250015	NM_020737	ENSG00000156564	LRFN2	FIGLER2|KIAA1246|SALM1	leucine rich repeat and fibronectin type III domain containing 2	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr6-346	chr6	43922972	43923972	+	19.2	1000	Intergenic	L1MB7|LINE|L1	-44865	NM_001171992	221416	Hs.531926	NM_153246	ENSG00000181577	C6orf223	-	chromosome 6 open reading frame 223	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr6-348	chr6	45421901	45425981	+	61.4	4080	"intron (NM_001015051, intron 5 of 7)"	L1ME4a|LINE|L1	33627	NM_001278478	860	Hs.535845	NM_004348	ENSG00000124813	RUNX2	AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA	runt related transcription factor 2	protein-coding	61.45	12.13	5.065952185	5.84E-19
chr6-353	chr6	52043774	52045710	+	35.8	1936	Intergenic	Intergenic	-6443	NM_002190	3605	Hs.41724	NM_002190	ENSG00000112115	IL17A	CTLA-8|CTLA8|IL-17|IL-17A|IL17	interleukin 17A	protein-coding	35.84	5.34	6.711610487	1.37E-14
chr6-356	chr6	100325071	100326071	+	20.5	1000	Intergenic	Intergenic	-116343	NR_038384	728012	Hs.434366	NR_038384	ENSG00000229315	MCHR2-AS1	-	MCHR2 antisense RNA 1	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr6-357	chr6	106546107	106549594	+	63.4	3487	"intron (NM_001198, intron 4 of 6)"	"intron (NM_001198, intron 4 of 6)"	1113	NM_182907	639	Hs.436023	NM_001198	ENSG00000057657	PRDM1	BLIMP1|PRDI-BF1	PR/SET domain 1	protein-coding	63.37	12.13	5.224237428	1.13E-19
chr6-360	chr6	108114361	108115654	+	23	1293	"intron (NM_198081, intron 1 of 7)"	AluJb|SINE|Alu	30514	NM_001286408	256380	Hs.486109	NM_198081	ENSG00000146285	SCML4	dJ47M23.1	sex comb on midleg-like 4 (Drosophila)	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr6-365	chr6	112602919	112603919	+	20.5	1000	"intron (NR_121193, intron 2 of 2)"	"intron (NR_121193, intron 2 of 2)"	-27502	NM_001105209	3910	Hs.654572	NM_002290	ENSG00000112769	LAMA4	CMD1JJ|LAMA3|LAMA4*-1	laminin subunit alpha 4	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr6-368	chr6	130686873	130688185	+	25	1312	promoter-TSS (NM_001258275)	promoter-TSS (NM_001258275)	103	NM_001258276	114801	Hs.591341	NM_052913	ENSG00000164484	TMEM200A	KIAA1913|TTMA|TTMC	transmembrane protein 200A	protein-coding	24.96	4.37	5.711670481	4.38E-09
chr6-369	chr6	134332178	134333178	+	20.5	1000	"intron (NM_145176, intron 2 of 4)"	AluJb|SINE|Alu	41111	NM_145176	154091	Hs.486508	NM_145176	ENSG00000146411	SLC2A12	GLUT12|GLUT8	solute carrier family 2 member 12	protein-coding	20.48	2.43	8.427983539	2.25E-10
chr6-380	chr6	150463869	150465728	+	34.6	1859	"intron (NM_030949, intron 1 of 3)"	CpG	610	NM_030949	81706	Hs.486798	NM_030949	ENSG00000198729	PPP1R14C	CPI17-like|KEPI|NY-BR-81	protein phosphatase 1 regulatory inhibitor subunit 14C	protein-coding	34.56	0	35.60086253	2.67E-40
chr6-382	chr6	150705050	150706306	+	21.1	1256	"intron (NR_134655, intron 1 of 5)"	"intron (NR_134655, intron 1 of 5)"	15650	NM_001318495	389434	Hs.310225	NM_203395	ENSG00000009765	IYD	C6orf71|DEHAL1|IYD-1|TDH4	iodotyrosine deiodinase	protein-coding	21.12	2.43	8.691358025	2.25E-10
chr6-383	chr6	151612760	151616217	+	49.3	3457	"intron (NM_005100, intron 2 of 4)"	"intron (NM_005100, intron 2 of 4)"	-32178	NM_144497	9590	Hs.371240	NM_005100	ENSG00000131016	AKAP12	AKAP250|SSeCKS	A-kinase anchoring protein 12	protein-coding	49.29	11.65	4.230901288	7.71E-13
chr6-384	chr6	152417133	152420586	+	48	3453	"intron (NM_001122740, intron 8 of 8)"	"intron (NM_001122740, intron 8 of 8)"	-50903	NR_036121	100423029		NR_036121	ENSG00000266423	MIR3163	-	microRNA 3163	ncRNA	48.01	10.68	4.495318352	2.70E-13
chr6-387	chr6	158360595	158361978	+	22.4	1383	"intron (NM_016224, intron 16 of 17)"	"intron (NM_016224, intron 16 of 17)"	-41602	NM_003898	8871	Hs.434494	NM_003898	ENSG00000078269	SYNJ2	INPP5H	synaptojanin 2	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr6-394	chr6	160805826	160809594	+	60.2	3768	"intron (NM_021977, intron 1 of 10)"	"intron (NM_021977, intron 1 of 10)"	38305	NM_021977	6581	Hs.567337	NM_021977	ENSG00000146477	SLC22A3	EMT|EMTH|OCT3	solute carrier family 22 member 3	protein-coding	60.17	8.74	6.884439359	7.80E-24
chr6-396	chr6	167696570	167697861	+	25.6	1291	Intergenic	Intergenic	-7588	NM_001143947	54346	Hs.567508	NM_018974	ENSG00000112494	UNC93A	Unc-93A|dJ366N23.1|dJ366N23.2	unc-93 homolog A (C. elegans)	protein-coding	25.6	1.94	13.19587629	4.03E-16
chr6-398	chr6	168164570	168165830	+	20.5	1260	Intergenic	Intergenic	32339	NR_026773	26238	Hs.520583	NM_014356	ENSG00000146521	LINC01558	C6orf123|HGC6.2|LINC01557|dJ431P23.4	long intergenic non-protein coding RNA 1558	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr6-399	chr6	168853481	168854739	+	23	1258	"intron (NM_001166412, intron 1 of 12)"	"intron (NM_001166412, intron 1 of 12)"	12279	NM_001166412	64094	Hs.487200	NM_022138	ENSG00000112562	SMOC2	DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1	SPARC related modular calcium binding 2	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr6-400	chr6	169819179	169820433	+	23	1254	Intergenic	Intergenic	-165597	NM_003247	7058	Hs.371147	NM_003247	ENSG00000186340	THBS2	TSP2	thrombospondin 2	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr6-405	chr6	354207	357357	+	49.9	3150	Intergenic	Intergenic	-35957	NR_046000	3662	Hs.401013	NM_002460	ENSG00000137265	IRF4	LSIRF|MUM1|NF-EM5|SHEP8	interferon regulatory factor 4	protein-coding	49.93	12.13	4.116240725	6.08E-13
chr6-41	chr6	45387119	45392154	+	90.3	5035	promoter-TSS (NM_001278478)	promoter-TSS (NM_001278478)	-678	NM_001278478	860	Hs.535845	NM_004348	ENSG00000124813	RUNX2	AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA	runt related transcription factor 2	protein-coding	90.25	15.53	5.811332904	4.09E-30
chr6-419	chr6	7523802	7525076	+	21.1	1274	Intergenic	Intergenic	-17369	NM_001008844	1832	Hs.519873	NM_004415	ENSG00000096696	DSP	DCWHKTA|DP	desmoplakin	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr6-427	chr6	20326121	20327386	+	23.7	1265	Intergenic	MER57F|LTR|ERV1	-75384	NM_001949	1871	Hs.269408	NM_001949	ENSG00000112242	E2F3	E2F-3	E2F transcription factor 3	protein-coding	23.68	1.94	12.20618557	6.71E-14
chr6-428	chr6	33821390	33822652	+	23.7	1262	Intergenic	AluSx|SINE|Alu	42663	NR_038989	100507584	Hs.547104	NR_038989	ENSG00000249346	LINC01016	-	long intergenic non-protein coding RNA 1016	ncRNA	23.68	3.4	6.964705882	5.45E-10
chr6-433	chr6	38703037	38704316	+	19.8	1279	"intron (NM_001206927, intron 5 of 92)"	AluSx3|SINE|Alu	20559	NM_001206927	1769	Hs.520106	NM_001371	ENSG00000124721	DNAH8	ATPase|hdhc9	dynein axonemal heavy chain 8	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr6-435	chr6	40249672	40250930	+	19.2	1258	Intergenic	MER5A|DNA|hAT-Charlie	73444	NR_038887	401260	Hs.654837	NM_001001705		LINC00951	-	long intergenic non-protein coding RNA 951	ncRNA	19.2	4.37	4.393592677	3.16E-06
chr6-437	chr6	40648185	40649185	+	19.2	1000	Intergenic	Intergenic	-93482	NM_020737	57497	Hs.250015	NM_020737	ENSG00000156564	LRFN2	FIGLER2|KIAA1246|SALM1	leucine rich repeat and fibronectin type III domain containing 2	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr6-438	chr6	41436671	41437671	+	19.2	1000	Intergenic	Intergenic	-33011	NR_120347	103106903	Hs.563396	NR_120347	ENSG00000226917	LINC01276	-	long intergenic non-protein coding RNA 1276	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr6-443	chr6	44526479	44527751	+	21.1	1272	Intergenic	Intergenic	-7497	NR_134609	105375075	Hs.123393	NR_134609		LOC105375075	-	uncharacterized LOC105375075	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr6-450	chr6	50815152	50816418	+	21.8	1266	TTS (NM_003221)	TTS (NM_003221)	29346	NM_003221	7021	Hs.33102	NM_003221	ENSG00000008196	TFAP2B	AP-2B|AP2-B|PDA2	transcription factor AP-2 beta	protein-coding	21.76	3.4	6.4	3.73E-09
chr6-454	chr6	52113052	52114609	+	29.4	1557	Intergenic	Intergenic	-4532	NM_052872	112744	Hs.272295	NM_052872	ENSG00000112116	IL17F	CANDF6|IL-17F|ML-1|ML1	interleukin 17F	protein-coding	29.44	3.88	7.587628866	2.58E-13
chr6-459	chr6	106554155	106558515	+	72.3	4360	"3' UTR (NM_182907, exon 5 of 5)"	"3' UTR (NM_182907, exon 5 of 5)"	9598	NM_182907	639	Hs.436023	NM_001198	ENSG00000057657	PRDM1	BLIMP1|PRDI-BF1	PR/SET domain 1	protein-coding	72.33	14.56	4.96771978	2.74E-21
chr6-469	chr6	112273159	112274441	+	21.8	1282	Intergenic	Intergenic	-79145	NM_002037	2534	Hs.390567	NM_002037	ENSG00000010810	FYN	SLK|SYN|p59-FYN	"FYN proto-oncogene, Src family tyrosine kinase"	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr6-470	chr6	125676586	125678031	+	25	1445	Intergenic	L2a|LINE|L2	-54026	NM_016063	51020	Hs.32826	NM_016063	ENSG00000111906	HDDC2	C6orf74|CGI-130|NS5ATP2|dJ167O5.2	HD domain containing 2	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr6-473	chr6	126077020	126081831	+	60.8	4811	"intron (NM_012259, intron 4 of 4)"	"intron (NM_012259, intron 4 of 4)"	8693	NM_012259	23493	Hs.144287	NM_012259	ENSG00000135547	HEY2	CHF1|GRIDLOCK|GRL|HERP1|HESR2|HRT2|bHLHb32	hes related family bHLH transcription factor with YRPW motif 2	protein-coding	60.81	14.08	4.318892045	7.27E-16
chr6-475	chr6	134496425	134497425	+	19.8	1000	promoter-TSS (NM_005627)	promoter-TSS (NM_005627)	145	NM_001143678	6446	Hs.510078	NM_005627	ENSG00000118515	SGK1	SGK	serum/glucocorticoid regulated kinase 1	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr6-477	chr6	135128307	135129636	+	21.1	1329	Intergenic	Intergenic	142289	NM_170771	64577	Hs.486520	NM_022568	ENSG00000118514	ALDH8A1	ALDH12|DJ352A20.2	aldehyde dehydrogenase 8 family member A1	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr6-479	chr6	136142286	136143286	+	18.6	1000	Intergenic	Intergenic	-30048	NM_018945	27115	Hs.744230	NM_018945	ENSG00000171408	PDE7B	bA472E5.1	phosphodiesterase 7B	protein-coding	18.56	4.37	4.247139588	1.41E-05
chr6-481	chr6	137369085	137370085	+	19.2	1000	Intergenic	Intergenic	-3268	NM_014432	53832	Hs.445868	NM_014432	ENSG00000016402	IL20RA	CRF2-8|IL-20R-alpha|IL-20R1|IL-20RA	interleukin 20 receptor subunit alpha	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr6-482	chr6	137452304	137453304	+	18.6	1000	Intergenic	Intergenic	41981	NM_052962	116379	Hs.126891	NM_052962	ENSG00000164485	IL22RA2	CRF2-10|CRF2-S1|CRF2X|IL-22BP|IL-22R-alpha-2|IL-22RA2|ZCYTOR16	interleukin 22 receptor subunit alpha 2	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr6-485	chr6	137807562	137815411	+	139.5	7849	Intergenic	Intergenic	4045	NM_175747	167826	Hs.195398	NM_175747	ENSG00000177468	OLIG3	Bhlhb7|bHLHe20	oligodendrocyte transcription factor 3	protein-coding	139.54	18.44	7.567245119	8.54E-57
chr6-488	chr6	143856993	143857993	+	19.2	1000	Intergenic	Intergenic	-24473	NM_032020	2519	Hs.17680	NM_032020	ENSG00000001036	FUCA2	dJ20N2.5	"fucosidase, alpha-L- 2, plasma"	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr6-490	chr6	148520987	148523809	+	48	2822	Intergenic	MIR|SINE|MIR	-71014	NM_001346505	23328	Hs.193133	NM_015278	ENSG00000111961	SASH1	SH3D6A|dJ323M4.1	SAM and SH3 domain containing 1	protein-coding	48.01	9.71	4.94438723	1.65E-14
chr6-493	chr6	149316751	149318088	+	22.4	1337	"intron (NM_005715, intron 5 of 7)"	AluSx1|SINE|Alu	-31599	NR_038408	100128176	Hs.557541	NR_038408		UST-AS1	-	UST antisense RNA 1	ncRNA	22.4	1.46	15.34246575	8.59E-15
chr6-495	chr6	150598708	150599996	+	20.5	1288	Intergenic	AluSc8|SINE|Alu	-90676	NM_203395	389434	Hs.310225	NM_203395	ENSG00000009765	IYD	C6orf71|DEHAL1|IYD-1|TDH4	iodotyrosine deiodinase	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr6-505	chr6	167812633	167814724	+	42.2	2091	Intergenic	Intergenic	-15680	NM_004610	6953	Hs.351	NM_004610	ENSG00000203690	TCP10	TCP10A	t-complex 10	protein-coding	42.25	2.91	14.51890034	7.64E-27
chr6-510	chr6	289306	290306	+	18.6	1000	Intergenic	AluSx|SINE|Alu	-2251	NR_104475	56940	Hs.29106	NM_020185	ENSG00000112679	DUSP22	JKAP|JSP-1|JSP1|LMW-DSP2|LMWDSP2|MKP-x|MKPX|VHX	dual specificity phosphatase 22	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr6-511	chr6	292422	293912	+	26.9	1490	"intron (NR_104475, intron 1 of 3)"	"intron (NR_104475, intron 1 of 3)"	1110	NM_001286555	56940	Hs.29106	NM_020185	ENSG00000112679	DUSP22	JKAP|JSP-1|JSP1|LMW-DSP2|LMWDSP2|MKP-x|MKPX|VHX	dual specificity phosphatase 22	protein-coding	26.88	4.85	5.542268041	7.61E-10
chr6-515	chr6	764520	767412	+	38.4	2892	Intergenic	Intergenic	-72825	NM_018303	55770	Hs.484412	NM_018303	ENSG00000112685	EXOC2	SEC5|SEC5L1|Sec5p	exocyst complex component 2	protein-coding	38.4	6.8	5.647058824	1.26E-13
chr6-518	chr6	1495607	1496607	+	18.6	1000	Intergenic	Intergenic	-105461	NR_106778	102466720		NR_106778	ENSG00000275859	MIR6720	hsa-mir-6720|mir-6720	microRNA 6720	ncRNA	18.56	3.4	5.458823529	8.42E-07
chr6-520	chr6	3468319	3469319	+	17.9	1000	Intergenic	Intergenic	-12026	NM_015482	63027	Hs.713588	NM_015482	ENSG00000137266	SLC22A23	C6orf85	solute carrier family 22 member 23	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr6-521	chr6	3749888	3753087	+	51.2	3199	"intron (NM_183373, intron 1 of 4)"	CpG	759	NM_183373	221749	Hs.484500	NM_183373	ENSG00000168994	PXDC1	C6orf145	PX domain containing 1	protein-coding	51.21	7.77	6.590733591	6.93E-20
chr6-525	chr6	7566581	7567581	+	19.2	1000	"intron (NM_001008844, intron 8 of 23)"	"intron (NM_001008844, intron 8 of 23)"	-23351	NM_152551	154007	Hs.13366	NM_152551	ENSG00000168566	SNRNP48	C6orf151|dJ336K20B.1|dJ512B11.2	small nuclear ribonucleoprotein U11/U12 subunit 48	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr6-527	chr6	7712325	7713325	+	17.9	1000	Intergenic	L2c|LINE|L2	-13507	NM_001718	654	Hs.285671	NM_001718	ENSG00000153162	BMP6	VGR|VGR1	bone morphogenetic protein 6	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr6-529	chr6	11625243	11626243	+	18.6	1000	Intergenic	Intergenic	87283	NM_001100829	100113407	Hs.146317	NM_001100829	ENSG00000205269	TMEM170B	-	transmembrane protein 170B	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr6-531	chr6	13238032	13239032	+	18.6	1000	"intron (NM_001322314, intron 8 of 12)"	"intron (NM_001322314, intron 8 of 12)"	45142	NR_134859	100130357	Hs.484678	NM_001242698		LOC100130357	-	uncharacterized LOC100130357	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr6-534	chr6	15868624	15869624	+	17.9	1000	Intergenic	Intergenic	-205835	NM_001271669	84062	Hs.571148	NM_032122	ENSG00000047579	DTNBP1	BLOC1S8|DBND|HPS7|My031|SDY	dystrobrevin binding protein 1	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr6-538	chr6	28311077	28312077	+	18.6	1000	"intron (NM_001135215, intron 3 of 7)"	AluY|SINE|Alu	-6114	NM_024493	80317	Hs.380930	NM_024493	ENSG00000189298	ZKSCAN3	ZF47|ZFP306|ZNF306|ZNF309|ZSCAN13|ZSCAN35|Zfp47|dJ874C20.1|dJ874C20.1.|zfp-47	zinc finger with KRAB and SCAN domains 3	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr6-543	chr6	33989041	33990950	+	32	1909	"3' UTR (NM_001282847, exon 10 of 10)"	"3' UTR (NM_001282847, exon 10 of 10)"	-22167	NR_031681	100302123		NR_031681	ENSG00000221697	MIR1275	MIRN1275|hsa-mir-1275|mir-1275	microRNA 1275	ncRNA	32	6.8	4.705882353	5.32E-10
chr6-545	chr6	35743293	35746530	+	58.2	3237	"intron (NR_104469, intron 1 of 1)"	"intron (NR_104469, intron 1 of 1)"	540	NR_104467	389383	Hs.259563	NM_207409	ENSG00000196748	CLPSL2	AAAL3045|C6orf126|UNQ3045|dJ510O8.5	colipase like 2	protein-coding	58.25	10.68	5.45411985	6.95E-19
chr6-557	chr6	44446385	44447385	+	17.3	1000	Intergenic	Intergenic	43507	NR_039785	100616352		NR_039785	ENSG00000266619	MIR4642	-	microRNA 4642	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr6-559	chr6	44630410	44632178	+	32	1768	Intergenic	L2c|LINE|L2	-111676	NR_134609	105375075	Hs.123393	NR_134609		LOC105375075	-	uncharacterized LOC105375075	ncRNA	32	7.77	4.118404118	7.28E-09
chr6-564	chr6	45497876	45498876	+	19.2	1000	"intron (NM_001015051, intron 7 of 7)"	"intron (NM_001015051, intron 7 of 7)"	108062	NM_001278478	860	Hs.535845	NM_004348	ENSG00000124813	RUNX2	AML3|CBF-alpha-1|CBFA1|CCD|CCD1|CLCD|OSF-2|OSF2|PEA2aA|PEBP2aA	runt related transcription factor 2	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr6-566	chr6	45747110	45748924	+	31.4	1814	Intergenic	MIR3|SINE|MIR	157317	NR_045674	53405	Hs.485489	NM_016929	ENSG00000112782	CLIC5	DFNB102|DFNB103|MST130|MSTP130	chloride intracellular channel 5	protein-coding	31.36	4.85	6.465979381	3.34E-12
chr6-567	chr6	46840045	46841485	+	23	1440	"intron (NM_001098518, intron 10 of 20)"	"intron (NM_001098518, intron 10 of 20)"	-30443	NR_110658	101926962	Hs.680113	NR_110658		LOC101926962	-	uncharacterized LOC101926962	ncRNA	23.04	0.49	47.02040816	2.80E-24
chr6-569	chr6	52033780	52036643	+	58.9	2863	Intergenic	THE1A-int|LTR|ERVL-MaLR	-15974	NM_002190	3605	Hs.41724	NM_002190	ENSG00000112115	IL17A	CTLA-8|CTLA8|IL-17|IL-17A|IL17	interleukin 17A	protein-coding	58.89	10.68	5.514044944	1.25E-19
chr6-571	chr6	52592928	52593928	+	17.9	1000	Intergenic	MER57E1|LTR|ERV1	16529	NR_033760	730152	Hs.739662	NR_033760		GSTA7P	GSTAP2|GSTAP6	"glutathione S-transferase alpha 7, pseudogene"	pseudo	17.92	2.91	6.158075601	1.38E-07
chr6-572	chr6	52748931	52749931	+	17.9	1000	Intergenic	L1MC5|LINE|L1	25065	NM_000847	2940	Hs.102484	NM_000847	ENSG00000174156	GSTA3	GSTA3-3|GTA3	glutathione S-transferase alpha 3	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr6-575	chr6	70348436	70349436	+	19.2	1000	Intergenic	Intergenic	158113	NM_018368	55788	Hs.271643	NM_018368	ENSG00000168216	LMBRD1	C6orf209|LMBD1|MAHCF|NESI	LMBR1 domain containing 1	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr6-577	chr6	71995862	71997494	+	25.6	1632	Intergenic	AluSx1|SINE|Alu	-1467	NM_024576	79627	Hs.648434	NM_024576	ENSG00000119900	OGFRL1	dJ331H24.1	opioid growth factor receptor like 1	protein-coding	25.6	4.37	5.85812357	7.40E-10
chr6-587	chr6	109079488	109080488	+	17.3	1000	"intron (NR_033376, intron 1 of 4)"	AluSz|SINE|Alu	7131	NR_033376	387111	Hs.520310	NR_033376	ENSG00000203801	LINC00222	C6orf181|NCRNA00222|dJ354J5.2	long intergenic non-protein coding RNA 222	ncRNA	17.28	0.97	17.81443299	2.06E-12
chr6-590	chr6	117112659	117113659	+	19.2	1000	TTS (NM_001286355)	TTS (NM_001286355)	-26273	NM_001085480	221303	Hs.126712	NM_001085480	ENSG00000183807	FAM162B	C6orf189|bA86F4.2	family with sequence similarity 162 member B	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr6-594	chr6	134216529	134218448	+	34.6	1919	TTS (NM_198392)	TTS (NM_198392)	7228	NM_003206	6943	Hs.78061	NM_003206	ENSG00000118526	TCF21	POD1|bHLHa23	transcription factor 21	protein-coding	34.56	5.82	5.93814433	6.75E-13
chr6-598	chr6	137459462	137460462	+	18.6	1000	Intergenic	L1MA9|LINE|L1	34823	NM_052962	116379	Hs.126891	NM_052962	ENSG00000164485	IL22RA2	CRF2-10|CRF2-S1|CRF2X|IL-22BP|IL-22R-alpha-2|IL-22RA2|ZCYTOR16	interleukin 22 receptor subunit alpha 2	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr6-604	chr6	138033839	138035146	+	22.4	1307	Intergenic	Intergenic	25682	NR_121618	100507406	Hs.556703	NR_121618	ENSG00000234956	LOC100507406	-	uncharacterized LOC100507406	ncRNA	22.4	3.4	6.588235294	3.73E-09
chr6-606	chr6	143999139	144000899	+	32	1760	"intron (NM_001100165, intron 1 of 11)"	"intron (NM_001100165, intron 1 of 11)"	917	NM_001100165	9749	Hs.102471	NM_014721	ENSG00000112419	PHACTR2	C6orf56	phosphatase and actin regulator 2	protein-coding	32	3.88	8.24742268	3.92E-15
chr6-608	chr6	149069877	149070877	+	17.9	1000	"intron (NM_005715, intron 1 of 7)"	"intron (NM_005715, intron 1 of 7)"	2106	NM_005715	10090	Hs.657370	NM_005715	ENSG00000111962	UST	2OST	uronyl 2-sulfotransferase	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr6-610	chr6	150259963	150261546	+	24.3	1583	Intergenic	L1MC4a|LINE|L1	-2320	NM_025217	80328	Hs.656778	NM_025217	ENSG00000131015	ULBP2	ALCAN-alpha|N2DL2|NKG2DL2|RAET1H	UL16 binding protein 2	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr6-611	chr6	150694162	150695162	+	19.2	1000	"intron (NR_134655, intron 1 of 5)"	"intron (NR_134655, intron 1 of 5)"	4634	NM_001318495	389434	Hs.310225	NM_203395	ENSG00000009765	IYD	C6orf71|DEHAL1|IYD-1|TDH4	iodotyrosine deiodinase	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr6-617	chr6	157004155	157006132	+	35.8	1977	Intergenic	Intergenic	-93846	NM_001346813	57492	Hs.291587	NM_017519	ENSG00000049618	ARID1B	6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R	AT-rich interaction domain 1B	protein-coding	35.84	2.43	14.74897119	3.16E-23
chr6-619	chr6	158111801	158114370	+	34.6	2569	Intergenic	Intergenic	-131118	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	34.56	5.82	5.93814433	6.75E-13
chr6-621	chr6	158253252	158254252	+	19.2	1000	"intron (NM_016224, intron 1 of 17)"	THE1C|LTR|ERVL-MaLR	9549	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr6-629	chr6	160292125	160293384	+	20.5	1259	Intergenic	MER115|DNA|hAT-Tip100	-35220	NM_002377	4142	Hs.99900	NM_002377	ENSG00000130368	MAS1	MAS|MGRA	"MAS1 proto-oncogene, G protein-coupled receptor"	protein-coding	20.48	1.46	14.02739726	1.29E-13
chr6-630	chr6	160309090	160310389	+	21.1	1299	Intergenic	Intergenic	-18235	NM_002377	4142	Hs.99900	NM_002377	ENSG00000130368	MAS1	MAS|MGRA	"MAS1 proto-oncogene, G protein-coupled receptor"	protein-coding	21.12	2.43	8.691358025	2.25E-10
chr6-631	chr6	166258265	166259558	+	20.5	1293	Intergenic	Intergenic	-142128	NR_027284	441177	Hs.708964	NM_001013720	ENSG00000281832	LINC00602	-	long intergenic non-protein coding RNA 602	ncRNA	20.48	0.97	21.11340206	2.68E-16
chr6-632	chr6	166578839	166580123	+	20.5	1284	"intron (NM_003181, intron 3 of 8)"	"intron (NM_003181, intron 3 of 8)"	2676	NM_001270484	6862	Hs.389457	NM_003181	ENSG00000164458	T	SAVA|TFT	T brachyury transcription factor	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr6-635	chr6	167822525	167823525	+	18.6	1000	Intergenic	Intergenic	-25027	NM_004610	6953	Hs.351	NM_004610	ENSG00000203690	TCP10	TCP10A	t-complex 10	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr6-637	chr6	168527031	168528031	+	18.6	1000	Intergenic	L1MB2|LINE|L1	-45294	NR_110312	79981	Hs.266746	NM_024919	ENSG00000153303	FRMD1	bA164L23.1	FERM domain containing 1	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr6-647	chr6	1575947	1577261	+	19.8	1314	Intergenic	Intergenic	-29162	NR_125804	101927703	Hs.607964	NR_125804		FOXCUT	LINC01379|TCONS_00011636	FOXC1 upstream transcript (non-protein coding)	ncRNA	19.84	1.94	10.22680412	9.57E-11
chr6-650	chr6	2966364	2967636	+	26.9	1272	"intron (NM_001297700, intron 1 of 6)"	"intron (NM_001297700, intron 1 of 6)"	4282	NM_001271823	5269	Hs.519523	NM_004568	ENSG00000124570	SERPINB6	CAP|DFNB91|MSTP057|PI-6|PI6|PTI|SPI3	serpin family B member 6	protein-coding	26.88	5.82	4.618556701	1.71E-08
chr6-651	chr6	2991406	2992406	+	18.6	1000	TTS (NR_026856)	TTS (NR_026856)	3705	NR_026856	401232	Hs.720158	NM_207495		LINC01011	-	long intergenic non-protein coding RNA 1011	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr6-655	chr6	3893840	3894840	+	17.9	1000	Intergenic	Intergenic	44740	NM_012135	26240	Hs.140944	NM_012135	ENSG00000145945	FAM50B	D6S2654E|X5L	family with sequence similarity 50 member B	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr6-658	chr6	7539580	7543205	+	59.5	3625	promoter-TSS (NM_001319034)	promoter-TSS (NM_001319034)	-416	NM_001008844	1832	Hs.519873	NM_004415	ENSG00000096696	DSP	DCWHKTA|DP	desmoplakin	protein-coding	59.53	8.74	6.811212815	5.39E-23
chr6-659	chr6	7554796	7555796	+	18.6	1000	"intron (NM_001008844, intron 1 of 23)"	"intron (NM_001008844, intron 1 of 23)"	13488	NM_004415	1832	Hs.519873	NM_004415	ENSG00000096696	DSP	DCWHKTA|DP	desmoplakin	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr6-660	chr6	13191610	13193082	+	26.2	1472	"intron (NM_001322314, intron 5 of 12)"	"intron (NM_001322314, intron 5 of 12)"	91328	NR_134859	100130357	Hs.484678	NM_001242698		LOC100130357	-	uncharacterized LOC100130357	protein-coding	26.24	3.88	6.762886598	1.00E-10
chr6-662	chr6	13493970	13496930	+	46.1	2960	Intergenic	Intergenic	-7581	NM_001242629	54438	Hs.484686	NM_018988	ENSG00000145990	GFOD1	ADG-90|C6orf114	glucose-fructose oxidoreductase domain containing 1	protein-coding	46.09	7.77	5.931788932	1.14E-16
chr6-667	chr6	16237312	16243638	+	101.1	6326	"intron (NM_006877, intron 1 of 8)"	"intron (NM_006877, intron 1 of 8)"	1664	NM_006877	2766	Hs.484741	NM_006877	ENSG00000137198	GMPR	GMPR 1|GMPR1	guanosine monophosphate reductase	protein-coding	101.13	16.99	5.952324897	1.18E-34
chr6-668	chr6	17447002	17448002	+	18.6	1000	"intron (NM_006366, intron 3 of 12)"	AluJr|SINE|Alu	53766	NM_006366	10486	Hs.132902	NM_006366	ENSG00000112186	CAP2	-	"CAP, adenylate cyclase-associated protein, 2 (yeast)"	protein-coding	18.56	1.46	12.71232877	2.41E-11
chr6-669	chr6	18276778	18278288	+	23.7	1510	Intergenic	CpG	-12734	NM_001134709	7913	Hs.484813	NM_003472	ENSG00000124795	DEK	D6S231E	DEK proto-oncogene	protein-coding	23.68	0.97	24.41237113	5.03E-19
chr6-670	chr6	33480819	33481819	+	17.9	1000	Intergenic	Intergenic	58963	NM_152735	221504	Hs.591805	NM_152735	ENSG00000213588	ZBTB9	ZNF919	zinc finger and BTB domain containing 9	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr6-672	chr6	34070868	34071868	+	18.6	1000	"exon (NM_001256813, exon 2 of 11)"	"exon (NM_001256813, exon 2 of 11)"	2391	NM_001256813	2914	Hs.429018	NM_000841	ENSG00000124493	GRM4	GPRC1D|MGLUR4|mGlu4	glutamate metabotropic receptor 4	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr6-676	chr6	35465413	35466413	+	17.9	1000	"3' UTR (NM_003322, exon 15 of 15)"	"3' UTR (NM_003322, exon 15 of 15)"	-1052	NM_003214	7005	Hs.485205	NM_003214	ENSG00000007866	TEAD3	DTEF-1|ETFR-1|TEAD-3|TEAD5|TEF-5|TEF5	TEA domain transcription factor 3	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr6-680	chr6	36097318	36098688	+	17.9	1370	promoter-TSS (NM_002754)	promoter-TSS (NM_002754)	-258	NR_072996	5603	Hs.178695	NM_002754	ENSG00000156711	MAPK13	MAPK 13|MAPK-13|PRKM13|SAPK4|p38delta	mitogen-activated protein kinase 13	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr6-691	chr6	40451739	40453081	+	21.1	1342	"intron (NM_020737, intron 1 of 2)"	"intron (NM_020737, intron 1 of 2)"	102793	NM_020737	57497	Hs.250015	NM_020737	ENSG00000156564	LRFN2	FIGLER2|KIAA1246|SALM1	leucine rich repeat and fibronectin type III domain containing 2	protein-coding	21.12	1.46	14.46575342	1.29E-13
chr6-692	chr6	40506154	40509425	+	51.2	3271	"intron (NM_020737, intron 1 of 2)"	"intron (NM_020737, intron 1 of 2)"	47414	NM_020737	57497	Hs.250015	NM_020737	ENSG00000156564	LRFN2	FIGLER2|KIAA1246|SALM1	leucine rich repeat and fibronectin type III domain containing 2	protein-coding	51.21	8.74	5.859267735	3.69E-18
chr6-693	chr6	40680336	40681336	+	16.6	1000	Intergenic	Intergenic	-125633	NM_020737	57497	Hs.250015	NM_020737	ENSG00000156564	LRFN2	FIGLER2|KIAA1246|SALM1	leucine rich repeat and fibronectin type III domain containing 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr6-694	chr6	41281723	41283029	+	23	1306	Intergenic	HAL1|LINE|L1	-21152	NM_004828	9436	Hs.194721	NM_004828	ENSG00000096264	NCR2	CD336|LY95|NK-p44|NKP44|dJ149M18.1	natural cytotoxicity triggering receptor 2	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr6-696	chr6	43208806	43212473	+	66.6	3667	promoter-TSS (NM_032538)	promoter-TSS (NM_032538)	-779	NM_032538	84630	Hs.485436	NM_032538	ENSG00000146216	TTBK1	BDTK	tau tubulin kinase 1	protein-coding	66.57	10.68	6.233146067	2.81E-24
chr6-698	chr6	43801270	43804285	+	42.2	3015	Intergenic	Intergenic	-55988	NR_024478	100132354	Hs.376232	NR_024478		LINC01512	HI-LNC77	long intergenic non-protein coding RNA 1512	ncRNA	42.25	6.31	6.695721078	7.07E-17
chr6-700	chr6	43863272	43864272	+	17.3	1000	"intron (NR_024478, intron 1 of 1)"	L1ME3A|LINE|L1	5007	NR_024478	100132354	Hs.376232	NR_024478		LINC01512	HI-LNC77	long intergenic non-protein coding RNA 1512	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr6-701	chr6	44519016	44520395	+	25	1379	promoter-TSS (NR_134609)	promoter-TSS (NR_134609)	-87	NR_134609	105375075	Hs.123393	NR_134609		LOC105375075	-	uncharacterized LOC105375075	ncRNA	24.96	5.82	4.288659794	3.56E-07
chr6-704	chr6	45861147	45862551	+	24.3	1404	Intergenic	Intergenic	43485	NR_045674	53405	Hs.485489	NM_016929	ENSG00000112782	CLIC5	DFNB102|DFNB103|MST130|MSTP130	chloride intracellular channel 5	protein-coding	24.32	5.82	4.178694158	3.56E-07
chr6-710	chr6	52051950	52053987	+	33.9	2037	"intron (NM_002190, intron 2 of 2)"	"intron (NM_002190, intron 2 of 2)"	1783	NM_002190	3605	Hs.41724	NM_002190	ENSG00000112115	IL17A	CTLA-8|CTLA8|IL-17|IL-17A|IL17	interleukin 17A	protein-coding	33.92	2.91	11.65635739	5.32E-19
chr6-716	chr6	80411941	80413233	+	20.5	1292	"3' UTR (NM_031469, exon 4 of 4)"	"3' UTR (NM_031469, exon 4 of 4)"	-39049	NR_004393	6086		NR_004393	ENSG00000252316	RNY4	HY4|Y4	"RNA, Ro-associated Y4"	ncRNA	20.48	3.4	6.023529412	2.41E-08
chr6-719	chr6	91457317	91458317	+	18.6	1000	Intergenic	Intergenic	-160797	NM_003188	6885	Hs.594838	NM_003188	ENSG00000135341	MAP3K7	CSCF|FMD2|MEKK7|TAK1|TGF1a	mitogen-activated protein kinase kinase kinase 7	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr6-721	chr6	106536759	106537759	+	17.9	1000	"intron (NM_001198, intron 2 of 6)"	"intron (NM_001198, intron 2 of 6)"	3064	NM_001198	639	Hs.436023	NM_001198	ENSG00000057657	PRDM1	BLIMP1|PRDI-BF1	PR/SET domain 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr6-722	chr6	106540261	106543314	+	46.1	3053	"intron (NM_001198, intron 2 of 6)"	"intron (NM_001198, intron 2 of 6)"	-4950	NM_182907	639	Hs.436023	NM_001198	ENSG00000057657	PRDM1	BLIMP1|PRDI-BF1	PR/SET domain 1	protein-coding	46.09	11.16	4.129928315	4.14E-12
chr6-729	chr6	108453687	108454687	+	17.3	1000	Intergenic	Intergenic	-33075	NM_003269	7101	Hs.157688	NM_003269	ENSG00000112333	NR2E1	TLL|TLX|XTLL	nuclear receptor subfamily 2 group E member 1	protein-coding	17.28	1.46	11.83561644	2.99E-10
chr6-731	chr6	119400240	119401240	+	17.9	1000	promoter-TSS (NM_024581)	promoter-TSS (NM_024581)	-928	NM_024581	79632	Hs.443789	NM_024581	ENSG00000111879	FAM184A	C6orf60	family with sequence similarity 184 member A	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr6-736	chr6	134776784	134777784	+	18.6	1000	"intron (NR_125852, intron 2 of 4)"	"intron (NR_125852, intron 2 of 4)"	17756	NR_038218	154092	Hs.223718	NR_038216		LINC01010	-	long intergenic non-protein coding RNA 1010	ncRNA	18.56	0.97	19.13402062	1.12E-13
chr6-746	chr6	144279370	144282178	+	42.9	2808	"intron (NM_001289047, intron 2 of 3)"	MIRc|SINE|MIR	1773	NM_001317157	5325	Hs.743225	NM_002656	ENSG00000118495	PLAGL1	LOT1|ZAC|ZAC1	PLAG1 like zinc finger 1	protein-coding	42.89	10.68	4.015917603	9.13E-11
chr6-749	chr6	149307967	149309425	+	27.5	1458	"intron (NM_005715, intron 5 of 7)"	"intron (NM_005715, intron 5 of 7)"	-22876	NR_038408	100128176	Hs.557541	NR_038408		UST-AS1	-	UST antisense RNA 1	ncRNA	27.52	6.31	4.36133122	6.42E-08
chr6-751	chr6	150550600	150551600	+	16	1000	"intron (NM_030949, intron 3 of 3)"	"intron (NM_030949, intron 3 of 3)"	86912	NM_030949	81706	Hs.486798	NM_030949	ENSG00000198729	PPP1R14C	CPI17-like|KEPI|NY-BR-81	protein phosphatase 1 regulatory inhibitor subunit 14C	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-752	chr6	150713134	150717016	+	57.6	3882	"intron (NR_134655, intron 3 of 5)"	"intron (NR_134655, intron 3 of 5)"	25047	NM_001318495	389434	Hs.310225	NM_203395	ENSG00000009765	IYD	C6orf71|DEHAL1|IYD-1|TDH4	iodotyrosine deiodinase	protein-coding	57.61	13.11	4.394355454	1.10E-15
chr6-759	chr6	158233576	158235007	+	23.7	1431	Intergenic	Intergenic	-9912	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	23.68	1.94	12.20618557	6.71E-14
chr6-764	chr6	158307869	158311378	+	55.7	3509	"intron (NM_016224, intron 4 of 17)"	"intron (NM_016224, intron 4 of 17)"	65420	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	55.69	11.65	4.780257511	4.03E-16
chr6-776	chr6	166419316	166422618	+	53.1	3302	Intergenic	Intergenic	-19440	NR_026860	90632	Hs.31917	NR_026860	ENSG00000223414	LINC00473	C6orf176|bA142J11.1	long intergenic non-protein coding RNA 473	ncRNA	53.13	9.71	5.471678682	2.20E-17
chr6-778	chr6	167127686	167128936	+	18.6	1250	"intron (NM_001006932, intron 2 of 21)"	MLT1C|LTR|ERVL-MaLR	-87546	NM_021135	6196	Hs.655277	NM_021135	ENSG00000071242	RPS6KA2	HU-2|MAPKAPK1C|RSK|RSK3|S6K-alpha|S6K-alpha2|p90-RSK3|p90RSK2|pp90RSK3	ribosomal protein S6 kinase A2	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr6-779	chr6	168158589	168160289	+	32.6	1700	Intergenic	Intergenic	38100	NR_026773	26238	Hs.520583	NM_014356	ENSG00000146521	LINC01558	C6orf123|HGC6.2|LINC01557|dJ431P23.4	long intergenic non-protein coding RNA 1558	ncRNA	32.64	3.4	9.6	2.00E-16
chr6-780	chr6	168358767	168359767	+	17.3	1000	"intron (NM_001291964, intron 29 of 32)"	"intron (NM_001291964, intron 29 of 32)"	18352	NM_001129895	100128124	Hs.448059	NM_001129895		HGC6.3	-	uncharacterized LOC100128124	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr6-781	chr6	168909150	168910150	+	18.6	1000	"intron (NM_001166412, intron 1 of 12)"	"intron (NM_001166412, intron 1 of 12)"	67819	NM_001166412	64094	Hs.487200	NM_022138	ENSG00000112562	SMOC2	DTDP1|MST117|MSTP117|MSTP140|SMAP2|bA270C4A.1|bA37D8.1|dJ421D16.1	SPARC related modular calcium binding 2	protein-coding	18.56	0	19.11898173	9.96E-18
chr6-785	chr6	169653525	169654525	+	17.9	1000	"intron (NM_003247, intron 1 of 22)"	"intron (NM_003247, intron 1 of 22)"	184	NM_003247	7058	Hs.371147	NM_003247	ENSG00000186340	THBS2	TSP2	thrombospondin 2	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr6-789	chr6	170356282	170357282	+	16	1000	Intergenic	MER5A1|DNA|hAT-Charlie	-119084	NR_125878	102724511	Hs.550045	NR_125878		LOC102724511	-	uncharacterized LOC102724511	ncRNA	16	2.91	5.498281787	4.98E-06
chr6-790	chr6	170389000	170391028	+	33.9	2028	Intergenic	Intergenic	-85852	NR_125878	102724511	Hs.550045	NR_125878		LOC102724511	-	uncharacterized LOC102724511	ncRNA	33.92	2.91	11.65635739	5.32E-19
chr6-791	chr6	170536718	170537718	+	17.3	1000	Intergenic	Intergenic	34439	NR_002787	154449	Hs.447751	NR_002787	ENSG00000230960	LOC154449	-	uncharacterized LOC154449	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr6-801	chr6	775628	776628	+	17.3	1000	Intergenic	Intergenic	-82987	NM_018303	55770	Hs.484412	NM_018303	ENSG00000112685	EXOC2	SEC5|SEC5L1|Sec5p	exocyst complex component 2	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr6-802	chr6	1049851	1050851	+	17.9	1000	"intron (NR_027116, intron 1 of 3)"	L2b|LINE|L2	51216	NR_027116	285768	Hs.209463	NR_027115		LINC01622	-	long intergenic non-protein coding RNA 1622	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr6-803	chr6	1097439	1098439	+	17.9	1000	"intron (NR_027116, intron 1 of 3)"	"intron (NR_027116, intron 1 of 3)"	3628	NR_027116	285768	Hs.209463	NR_027115		LINC01622	-	long intergenic non-protein coding RNA 1622	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr6-809	chr6	1612391	1613391	+	17.3	1000	"3' UTR (NM_001453, exon 1 of 1)"	"3' UTR (NM_001453, exon 1 of 1)"	2210	NM_001453	2296	Hs.348883	NM_001453	ENSG00000054598	FOXC1	ARA|FKHL7|FREAC-3|FREAC3|IGDA|IHG1|IRID1|RIEG3	forkhead box C1	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr6-812	chr6	2901783	2904113	+	34.6	2330	"intron (NM_004155, intron 1 of 6)"	AluSz|SINE|Alu	598	NM_004155	5272	Hs.104879	NM_004155	ENSG00000170542	SERPINB9	CAP-3|CAP3|PI-9|PI9	serpin family B member 9	protein-coding	34.56	5.82	5.93814433	6.75E-13
chr6-816	chr6	3458868	3459868	+	17.9	1000	Intergenic	MIRc|SINE|MIR	-2575	NM_015482	63027	Hs.713588	NM_015482	ENSG00000137266	SLC22A23	C6orf85	solute carrier family 22 member 23	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr6-817	chr6	3796968	3797968	+	16	1000	Intergenic	Intergenic	-45222	NM_183373	221749	Hs.484500	NM_183373	ENSG00000168994	PXDC1	C6orf145	PX domain containing 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr6-822	chr6	4587266	4588266	+	17.9	1000	Intergenic	Intergenic	-23033	NR_122107	497048	Hs.591355	NM_001011540		KU-MEL-3	-	uncharacterized LOC497048	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr6-829	chr6	13398342	13399716	+	24.3	1374	"intron (NM_018988, intron 1 of 1)"	"intron (NM_018988, intron 1 of 1)"	9340	NM_001242630	54438	Hs.484686	NM_018988	ENSG00000145990	GFOD1	ADG-90|C6orf114	glucose-fructose oxidoreductase domain containing 1	protein-coding	24.32	3.4	7.152941176	7.55E-11
chr6-832	chr6	13416680	13417680	+	16.6	1000	"intron (NM_018988, intron 1 of 1)"	"intron (NM_018988, intron 1 of 1)"	-8811	NM_001242630	54438	Hs.484686	NM_018988	ENSG00000145990	GFOD1	ADG-90|C6orf114	glucose-fructose oxidoreductase domain containing 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr6-839	chr6	16118894	16119894	+	16	1000	Intergenic	Intergenic	-9923	NM_013262	29116	Hs.484738	NM_013262	ENSG00000007944	MYLIP	IDOL|MIR	myosin regulatory light chain interacting protein	protein-coding	16	2.91	5.498281787	4.98E-06
chr6-84	chr6	76457797	76459848	+	47.4	2051	promoter-TSS (NM_001300899)	promoter-TSS (NM_001300899)	-71	NM_001300899	4646	Hs.149387	NM_004999	ENSG00000196586	MYO6	DFNA22|DFNB37	myosin VI	protein-coding	47.37	9.71	4.878475798	1.65E-14
chr6-841	chr6	16246396	16247717	+	21.8	1321	"intron (NM_006877, intron 1 of 8)"	"intron (NM_006877, intron 1 of 8)"	8245	NM_006877	2766	Hs.484741	NM_006877	ENSG00000137198	GMPR	GMPR 1|GMPR1	guanosine monophosphate reductase	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr6-843	chr6	18113134	18114134	+	16.6	1000	Intergenic	L1MA2|LINE|L1	9217	NM_198586	378884	Hs.348351	NM_198586	ENSG00000187566	NHLRC1	EPM2A|EPM2B|MALIN|bA204B7.2	NHL repeat containing E3 ubiquitin protein ligase 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr6-848	chr6	33687883	33688883	+	17.3	1000	Intergenic	Intergenic	-8855	NM_032340	84300	Hs.732448	NM_032340	ENSG00000137288	UQCC2	C6orf125|Cbp6|M19|MNF1|bA6B20.2	ubiquinol-cytochrome c reductase complex assembly factor 2	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr6-856	chr6	35763720	35764720	+	17.9	1000	"intron (NM_001832, intron 1 of 2)"	MIR|SINE|MIR	901	NM_001832	1208	Hs.1340	NM_001832	ENSG00000137392	CLPS	-	colipase	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr6-857	chr6	36708110	36711569	+	52.5	3459	"3' UTR (NM_020939, exon 21 of 21)"	"3' UTR (NM_020939, exon 21 of 21)"	15347	NM_001314018	57699	Hs.657869	NM_020939	ENSG00000124772	CPNE5	COPN5|CPN5	copine 5	protein-coding	52.49	7.77	6.755469755	1.02E-20
chr6-860	chr6	37164655	37165655	+	16.6	1000	Intergenic	L1PB4|LINE|L1	27233	NM_001243186	5292	Hs.81170	NM_002648	ENSG00000137193	PIM1	PIM	"Pim-1 proto-oncogene, serine/threonine kinase"	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr6-866	chr6	39451392	39452392	+	17.3	1000	"intron (NM_001289021, intron 12 of 21)"	"intron (NM_001289021, intron 12 of 21)"	-52742	NM_001289024	221458	Hs.588202	NM_145027	ENSG00000164627	KIF6	C6orf102|dJ1043E3.1|dJ137F1.4|dJ188D3.1	kinesin family member 6	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr6-868	chr6	40158265	40159265	+	17.9	1000	Intergenic	Intergenic	164980	NR_038887	401260	Hs.654837	NM_001001705		LINC00951	-	long intergenic non-protein coding RNA 951	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr6-869	chr6	40227317	40230988	+	55.7	3671	Intergenic	Intergenic	94593	NR_038887	401260	Hs.654837	NM_001001705		LINC00951	-	long intergenic non-protein coding RNA 951	ncRNA	55.69	10.19	5.465161923	3.91E-18
chr6-875	chr6	42072280	42073280	+	17.9	1000	"exon (NM_001164446, exon 4 of 5)"	"exon (NM_001164446, exon 4 of 5)"	37935	NM_001164446	647024	Hs.444277	NM_001164446	ENSG00000188112	C6orf132	bA7K24.2	chromosome 6 open reading frame 132	protein-coding	17.92	1.46	12.2739726	2.41E-11
chr6-877	chr6	43252728	43253728	+	16.6	1000	"3' UTR (NM_032538, exon 15 of 15)"	"3' UTR (NM_032538, exon 15 of 15)"	-12770	NM_006672	10864	Hs.485438	NM_006672	ENSG00000137204	SLC22A7	NLT|OAT2	solute carrier family 22 member 7	protein-coding	16.64	0.49	33.95918367	3.68E-16
chr6-885	chr6	46619448	46621521	+	37.1	2073	promoter-TSS (NM_004277)	promoter-TSS (NM_004277)	83	NM_016593	51302	Hs.387367	NM_016593	ENSG00000146233	CYP39A1	-	cytochrome P450 family 39 subfamily A member 1	protein-coding	37.12	5.82	6.378006873	1.70E-14
chr6-889	chr6	52080481	52081481	+	17.3	1000	Intergenic	L2b|LINE|L2	28317	NM_052872	112744	Hs.272295	NM_052872	ENSG00000112116	IL17F	CANDF6|IL-17F|ML-1|ML1	interleukin 17F	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr6-899	chr6	100215672	100216672	+	16	1000	Intergenic	Tigger1a_Art|DNA|TcMar-Tigger	161522	NM_021620	59336	Hs.287386	NM_021620	ENSG00000112238	PRDM13	MU-MB-20.220|PFM10	PR/SET domain 13	protein-coding	16	1.94	8.24742268	7.67E-08
chr6-908	chr6	108489528	108493241	+	48	3713	"intron (NM_001286102, intron 1 of 8)"	CpG	2157	NM_001286102	7101	Hs.157688	NM_003269	ENSG00000112333	NR2E1	TLL|TLX|XTLL	nuclear receptor subfamily 2 group E member 1	protein-coding	48.01	11.65	4.121030043	3.24E-12
chr6-909	chr6	109166903	109167903	+	17.9	1000	Intergenic	Intergenic	-2216	NM_001286609	84071	Hs.645481	NM_032131	ENSG00000118690	ARMC2	bA787I22.1	armadillo repeat containing 2	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr6-910	chr6	110348047	110349047	+	17.3	1000	Intergenic	Intergenic	49088	NM_001286099	2830	Hs.46332	NM_005284	ENSG00000146360	GPR6	-	G protein-coupled receptor 6	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr6-912	chr6	112599173	112600173	+	17.9	1000	"intron (NR_121193, intron 2 of 2)"	L1ME3F|LINE|L1	-23756	NM_001105209	3910	Hs.654572	NM_002290	ENSG00000112769	LAMA4	CMD1JJ|LAMA3|LAMA4*-1	laminin subunit alpha 4	protein-coding	17.92	1.46	12.2739726	2.41E-11
chr6-914	chr6	114323465	114324465	+	17.3	1000	"intron (NR_125845, intron 4 of 9)"	"intron (NR_125845, intron 4 of 9)"	-31606	NR_033441	3066	Hs.3352	NM_001527	ENSG00000196591	HDAC2	HD2|RPD3|YAF1	histone deacetylase 2	protein-coding	17.28	0	17.80043126	3.68E-16
chr6-917	chr6	123109120	123110120	+	17.9	1000	promoter-TSS (NM_006714)	promoter-TSS (NM_006714)	-574	NM_001286138	10924	Hs.486357	NM_006714	ENSG00000172594	SMPDL3A	ASM3A|ASML3a|yR36GH4.1	sphingomyelin phosphodiesterase acid like 3A	protein-coding	17.92	0	18.4597065	9.96E-18
chr6-919	chr6	125463506	125464757	+	21.1	1251	Intergenic	Intergenic	-10744	NM_001003397	7164	Hs.591347	NM_003287	ENSG00000111907	TPD52L1	D53	tumor protein D52-like 1	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr6-921	chr6	125803071	125804071	+	17.3	1000	Intergenic	Intergenic	-180289	NM_016063	51020	Hs.32826	NM_016063	ENSG00000111906	HDDC2	C6orf74|CGI-130|NS5ATP2|dJ167O5.2	HD domain containing 2	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr6-929	chr6	136150387	136151939	+	26.2	1552	Intergenic	Intergenic	-21671	NM_018945	27115	Hs.744230	NM_018945	ENSG00000171408	PDE7B	bA472E5.1	phosphodiesterase 7B	protein-coding	26.24	5.82	4.508591065	7.99E-08
chr6-931	chr6	136662933	136663933	+	17.3	1000	TTS (NM_001198608)	TTS (NM_001198608)	-52444	NM_001077441	9774	Hs.486542	NM_014739	ENSG00000029363	BCLAF1	BTF|bK211L9.1	BCL2 associated transcription factor 1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr6-932	chr6	136847266	136848266	+	17.9	1000	promoter-TSS (NM_001198608)	promoter-TSS (NM_001198608)	-22	NM_001198614	9053	Hs.486548	NM_003980	ENSG00000135525	MAP7	E-MAP-115|EMAP115	microtubule associated protein 7	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr6-935	chr6	137584712	137585712	+	17.9	1000	Intergenic	MER34A1|LTR|ERV1	-44645	NM_000416	3459	Hs.520414	NM_000416	ENSG00000027697	IFNGR1	CD119|IFNGR|IMD27A|IMD27B	interferon gamma receptor 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr6-939	chr6	137869287	137870287	+	17.9	1000	Intergenic	MER5B|DNA|hAT-Charlie	-54256	NM_175747	167826	Hs.195398	NM_175747	ENSG00000177468	OLIG3	Bhlhb7|bHLHe20	oligodendrocyte transcription factor 3	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr6-941	chr6	139012953	139015478	+	36.5	2525	"intron (NR_033896, intron 1 of 3)"	CpG	1410	NR_033896	441172	Hs.92290	NR_033896		FLJ46906	-	uncharacterized LOC441172	ncRNA	36.48	2.91	12.53608247	3.62E-21
chr6-945	chr6	142621943	142623992	+	35.8	2049	promoter-TSS (NM_020455)	promoter-TSS (NM_020455)	-89	NM_001032394	57211	Hs.743302	NM_020455	ENSG00000112414	ADGRG6	APG1|DREG|GPR126|LCCS9|PR126|PS1TP2|VIGR	adhesion G protein-coupled receptor G6	protein-coding	35.84	8.74	4.100686499	1.05E-09
chr6-949	chr6	148526735	148528035	+	19.8	1300	Intergenic	Intergenic	-66027	NM_001346505	23328	Hs.193133	NM_015278	ENSG00000111961	SASH1	SH3D6A|dJ323M4.1	SAM and SH3 domain containing 1	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr6-950	chr6	148533440	148534871	+	30.1	1431	Intergenic	Intergenic	-59257	NM_001346505	23328	Hs.193133	NM_015278	ENSG00000111961	SASH1	SH3D6A|dJ323M4.1	SAM and SH3 domain containing 1	protein-coding	30.08	4.37	6.883295195	2.70E-12
chr6-951	chr6	149091456	149092456	+	17.3	1000	"intron (NM_005715, intron 1 of 7)"	MIRc|SINE|MIR	23685	NM_005715	10090	Hs.657370	NM_005715	ENSG00000111962	UST	2OST	uronyl 2-sulfotransferase	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr6-952	chr6	150245624	150246624	+	16.6	1000	Intergenic	Intergenic	-1836	NR_130110	353091	Hs.535023	NM_001001788	ENSG00000203722	RAET1G	ULBP5	retinoic acid early transcript 1G	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr6-953	chr6	150375150	150379877	+	80	4727	Intergenic	L2b|LINE|L2	12770	NM_024518	79465	Hs.15422	NM_024518	ENSG00000131019	ULBP3	N2DL-3|NKG2DL3|RAET1N	UL16 binding protein 3	protein-coding	80.01	13.11	6.102974828	5.81E-28
chr6-954	chr6	150384724	150385724	+	17.3	1000	"intron (NM_024518, intron 4 of 4)"	"intron (NM_024518, intron 4 of 4)"	5059	NM_024518	79465	Hs.15422	NM_024518	ENSG00000131019	ULBP3	N2DL-3|NKG2DL3|RAET1N	UL16 binding protein 3	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr6-956	chr6	150471568	150472568	+	17.9	1000	"intron (NM_030949, intron 1 of 3)"	L2b|LINE|L2	7880	NM_030949	81706	Hs.486798	NM_030949	ENSG00000198729	PPP1R14C	CPI17-like|KEPI|NY-BR-81	protein phosphatase 1 regulatory inhibitor subunit 14C	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr6-958	chr6	150517339	150518601	+	19.8	1262	"intron (NM_030949, intron 1 of 3)"	"intron (NM_030949, intron 1 of 3)"	53782	NM_030949	81706	Hs.486798	NM_030949	ENSG00000198729	PPP1R14C	CPI17-like|KEPI|NY-BR-81	protein phosphatase 1 regulatory inhibitor subunit 14C	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr6-959	chr6	150642397	150643751	+	18.6	1354	Intergenic	Intergenic	-46954	NM_203395	389434	Hs.310225	NM_203395	ENSG00000009765	IYD	C6orf71|DEHAL1|IYD-1|TDH4	iodotyrosine deiodinase	protein-coding	18.56	1.46	12.71232877	2.41E-11
chr6-964	chr6	150919429	150921264	+	31.4	1835	promoter-TSS (NM_001029884)	promoter-TSS (NM_001029884)	-655	NR_138136	57480	Hs.189781	NM_001029884	ENSG00000120278	PLEKHG1	ARHGEF41	pleckstrin homology and RhoGEF domain containing G1	protein-coding	31.36	4.85	6.465979381	3.34E-12
chr6-965	chr6	152264619	152266314	+	28.2	1695	"exon (NM_001328100, exon 4 of 7)"	"exon (NM_001328100, exon 4 of 7)"	135224	NM_001328100	2099	Hs.208124	NM_000125	ENSG00000091831	ESR1	ER|ESR|ESRA|ESTRR|Era|NR3A1	estrogen receptor 1	protein-coding	28.16	4.37	6.443935927	1.84E-11
chr6-966	chr6	157023100	157024100	+	16.6	1000	Intergenic	Intergenic	-75389	NM_001346813	57492	Hs.291587	NM_017519	ENSG00000049618	ARID1B	6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R	AT-rich interaction domain 1B	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr6-967	chr6	157555909	157558842	+	48	2933	Intergenic	CpG	187916	NM_018452	729515	Hs.157212	NM_018452	ENSG00000215712	TMEM242	BM033|C6orf35	transmembrane protein 242	protein-coding	48.01	6.31	7.608557845	2.59E-20
chr6-970	chr6	157993866	157994866	+	16.6	1000	"intron (NM_153746, intron 2 of 8)"	"intron (NM_153746, intron 2 of 8)"	44202	NR_037463	100500899		NR_037463	ENSG00000266617	MIR3692	-	microRNA 3692	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr6-972	chr6	158245063	158246063	+	16.6	1000	"intron (NM_016224, intron 1 of 17)"	"intron (NM_016224, intron 1 of 17)"	1360	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr6-974	chr6	158262046	158263046	+	17.9	1000	"intron (NM_016224, intron 1 of 17)"	MER54A|LTR|ERVL	18343	NM_016224	51429	Hs.191213	NM_016224	ENSG00000130340	SNX9	SDP1|SH3PX1|SH3PXD3A|WISP	sorting nexin 9	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr6-981	chr6	159155574	159156828	+	20.5	1254	"intron (NM_001318745, intron 8 of 14)"	"intron (NM_001318745, intron 8 of 14)"	29584	NR_037482	100500851		NR_037482	ENSG00000265558	MIR3918	mir-3918	microRNA 3918	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr6-987	chr6	159779578	159780578	+	17.9	1000	Intergenic	Intergenic	-24485	NR_125873	102724053	Hs.98463	NR_125873	ENSG00000234777	LOC102724053	-	uncharacterized LOC102724053	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr6-989	chr6	159992884	159994474	+	25	1590	Intergenic	Intergenic	120681	NM_001322816	6648	Hs.487046	NM_000636	ENSG00000112096	SOD2	IPO-B|IPOB|MNSOD|MVCD6|Mn-SOD	"superoxide dismutase 2, mitochondrial"	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr6-993	chr6	160884359	160885991	+	24.3	1632	Intergenic	(T)n|Simple_repeat|Simple_repeat	46981	NR_028092	80350	Hs.654503	NM_024492	ENSG00000213071	LPAL2	APOA2|APOAL|APOARGC|apo(a)rg-C	"lipoprotein(a) like 2, pseudogene"	pseudo	24.32	3.88	6.268041237	6.68E-10
chr6-994	chr6	161148600	161149600	+	16	1000	"intron (NM_000301, intron 10 of 18)"	L1ME2|LINE|L1	25875	NM_001168338	5340	Hs.143436	NM_000301	ENSG00000122194	PLG	-	plasminogen	protein-coding	16	3.88	4.12371134	7.91E-05
chr6-995	chr6	163522354	163523354	+	17.9	1000	"intron (NM_001080379, intron 4 of 4)"	"intron (NM_001080379, intron 4 of 4)"	-47661	NR_110871	101929239	Hs.571035	NR_110871	ENSG00000225437	PACRG-AS2	-	PACRG antisense RNA 2	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr6-996	chr6	163670251	163671251	+	17.9	1000	"intron (NM_001080379, intron 4 of 4)"	"intron (NM_001080379, intron 4 of 4)"	-57717	NR_122120	729658	Hs.728991	NR_122120		PACRG-AS3	-	PACRG antisense RNA 3	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr6-999	chr6	167717804	167718804	+	16.6	1000	"intron (NM_018974, intron 5 of 7)"	AluSp|SINE|Alu	13501	NM_018974	54346	Hs.567508	NM_018974	ENSG00000112494	UNC93A	Unc-93A|dJ366N23.1|dJ366N23.2	unc-93 homolog A (C. elegans)	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr7_gl000195_random-150	chr7_gl000195_random	129495	130495	+	16.6	1000	Intergenic	Intergenic	-43260	NM_001242480	389831	Hs.743984	NM_001242480	ENSG00000276256	LOC389831	-	uncharacterized LOC389831	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr7_gl000195_random-17	chr7_gl000195_random	17437	18437	+	32	1000	Intergenic	BSR/Beta|Satellite|Satellite	48103	NM_001322975	102723360	Hs.743984	NM_001322975	ENSG00000277991	LOC102723360	-	uncharacterized LOC102723360	protein-coding	32	7.77	4.118404118	7.28E-09
chr7_gl000195_random-47	chr7_gl000195_random	97954	98954	+	24.3	1000	Intergenic	L1MB2|LINE|L1	-11719	NM_001242480	389831	Hs.743984	NM_001242480	ENSG00000276256	LOC389831	-	uncharacterized LOC389831	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr7-1006	chr7	154985543	154986543	+	16	1000	Intergenic	MIRb|SINE|MIR	-103439	NM_001346590	3638	Hs.520819	NM_005542	ENSG00000186480	INSIG1	CL6	insulin induced gene 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr7-1017	chr7	155317729	155321032	+	49.9	3303	"intron (NM_001103176, intron 1 of 3)"	L1M5|LINE|L1	7159	NM_001103176	285888	Hs.146751	NM_001103176	ENSG00000146910	CNPY1	-	canopy FGF signaling regulator 1	protein-coding	49.93	7.77	6.425997426	4.59E-19
chr7-1026	chr7	156396153	156397153	+	16.6	1000	promoter-TSS (NR_103858)	promoter-TSS (NR_103858)	-764	NR_103858	100506380	Hs.721001	NR_103858	ENSG00000182648	LINC01006	C7orf13|MY040	long intergenic non-protein coding RNA 1006	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr7-1028	chr7	156418245	156419551	+	19.8	1306	Intergenic	AluSp|SINE|Alu	14450	NR_026865	129790	Hs.647014	NM_032625	ENSG00000182648	C7orf13	MY040	chromosome 7 open reading frame 13	ncRNA	19.84	1.94	10.22680412	9.57E-11
chr7-1029	chr7	156442745	156443745	+	16.6	1000	"intron (NR_131778, intron 3 of 8)"	"intron (NR_131778, intron 3 of 8)"	6750	NR_131778	140545	Hs.446194	NM_030936	ENSG00000105982	RNF32	FKSG33|HSD15|LMBR2	ring finger protein 32	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr7-1033	chr7	157237165	157238165	+	16.6	1000	Intergenic	Intergenic	-21260	NR_110157	101927914	Hs.623826	NR_110157	ENSG00000234210	LOC101927914	-	uncharacterized LOC101927914	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr7-1034	chr7	157495575	157496575	+	16.6	1000	"intron (NM_130843, intron 11 of 21)"	"intron (NM_130843, intron 11 of 21)"	-128961	NR_029689	406945		NR_029689	ENSG00000207960	MIR153-2	MIRN153-2|mir-153-2	microRNA 153-2	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr7-1035	chr7	157655749	157656749	+	17.3	1000	"non-coding (NR_038966, exon 4 of 4)"	"non-coding (NR_038966, exon 4 of 4)"	8972	NR_038966	100506585	Hs.661265	NR_038966	ENSG00000233038	LOC100506585	-	uncharacterized LOC100506585	ncRNA	17.28	2.43	7.111111111	1.14E-07
chr7-1037	chr7	158165581	158166581	+	14.1	1000	"intron (NM_130842, intron 1 of 21)"	"intron (NM_130842, intron 1 of 21)"	159424	NR_030325	693180		NR_030325	ENSG00000207637	MIR595	MIRN595|hsa-mir-595	microRNA 595	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr7-104	chr7	155234762	155236840	+	42.2	2078	Intergenic	MLT1C|LTR|ERVL-MaLR	-15023	NM_001427	2020	Hs.134989	NM_001427	ENSG00000164778	EN2	-	engrailed homeobox 2	protein-coding	42.25	7.28	5.803571429	3.82E-15
chr7-1040	chr7	120685	121685	+	16	1000	Intergenic	Intergenic	28253	NR_134325	102723672	Hs.605204	NR_134325		LOC102723672	-	uncharacterized LOC102723672	ncRNA	16	1.94	8.24742268	7.67E-08
chr7-1041	chr7	143998	145517	+	23	1519	"non-coding (NR_134325, exon 3 of 3)"	"non-coding (NR_134325, exon 3 of 3)"	4681	NR_134325	102723672	Hs.605204	NR_134325		LOC102723672	-	uncharacterized LOC102723672	ncRNA	23.04	3.4	6.776470588	5.45E-10
chr7-1042	chr7	170338	171338	+	15.4	1000	Intergenic	L1ME3A|LINE|L1	-4082	NR_134324	105375115	Hs.299538	NR_134324	ENSG00000239715	LOC105375115	-	uncharacterized LOC105375115	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr7-1050	chr7	1283123	1290132	+	105.6	7009	Intergenic	CpG	13973	NM_001080461	340260	Hs.232272	NM_001080461	ENSG00000164853	UNCX	UNCX4.1	UNC homeobox	protein-coding	105.61	11.65	9.065236052	1.15E-48
chr7-1052	chr7	1393167	1394463	+	17.9	1296	Intergenic	Intergenic	105294	NM_182924	79778	Hs.376617	NM_024723	ENSG00000164877	MICALL2	JRAB|MICAL-L2	MICAL like 2	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr7-1053	chr7	1772606	1775765	+	42.2	3159	"intron (NM_001128636, intron 1 of 1)"	"intron (NM_001128636, intron 1 of 1)"	7761	NR_120509	101927125	Hs.633957	NR_120508	ENSG00000236081	ELFN1-AS1	MYCLo-2	ELFN1 antisense RNA 1	ncRNA	42.25	4.85	8.711340206	3.69E-20
chr7-1057	chr7	3215270	3216935	+	24.3	1665	Intergenic	Intergenic	-17896	NR_126024	100129603	Hs.652997	NR_126024		LOC100129603	-	uncharacterized LOC100129603	ncRNA	24.32	2.91	8.357388316	5.77E-12
chr7-1061	chr7	3445306	3446674	+	22.4	1368	"intron (NM_152744, intron 1 of 44)"	"intron (NM_152744, intron 1 of 44)"	104910	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr7-1063	chr7	4670235	4671610	+	17.9	1375	Intergenic	Intergenic	-51008	NM_001037165	221937	Hs.487393	NM_001037165	ENSG00000164916	FOXK1	FOXK1L	forkhead box K1	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr7-1066	chr7	8297476	8298476	+	16.6	1000	"intron (NM_004968, intron 1 of 13)"	"intron (NM_004968, intron 1 of 13)"	3706	NM_022307	3382	Hs.487561	NM_004968	ENSG00000003147	ICA1	ICA69|ICAp69	islet cell autoantigen 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr7-1068	chr7	17489501	17490501	+	15.4	1000	"intron (NR_110014, intron 2 of 3)"	L1PREC2|LINE|L1	75460	NR_110015	102659288	Hs.559488	NR_110014		KCCAT333	-	renal clear cell carcinoma-associated transcript 333	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr7-1070	chr7	21579949	21580949	+	16	1000	Intergenic	Intergenic	-2384	NM_001277115	8701	Hs.520245	NM_001277115	ENSG00000105877	DNAH11	CILD7|DNAHBL|DNAHC11|DNHBL|DPL11	dynein axonemal heavy chain 11	protein-coding	16	3.4	4.705882353	2.25E-05
chr7-1072	chr7	23929372	23930372	+	16.6	1000	Intergenic	Intergenic	179927	NM_001260504	56164	Hs.309767	NM_031414	ENSG00000196335	STK31	SGK396|TDRD8	serine/threonine kinase 31	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr7-1073	chr7	24432418	24433418	+	16	1000	Intergenic	Intergenic	109111	NM_000905	4852	Hs.1832	NM_000905	ENSG00000122585	NPY	PYY4	neuropeptide Y	protein-coding	16	2.91	5.498281787	4.98E-06
chr7-1076	chr7	24610354	24611354	+	16	1000	Intergenic	Intergenic	-2111	NM_001303037	51678	Hs.533355	NM_016447	ENSG00000105926	MPP6	PALS2|VAM-1|VAM1|p55T	membrane palmitoylated protein 6	protein-coding	16	3.88	4.12371134	7.91E-05
chr7-1077	chr7	25669125	25670125	+	16.6	1000	Intergenic	Intergenic	319981	NR_029597	406940		NR_029597	ENSG00000199085	MIR148A	MIRN148|MIRN148A|hsa-mir-148|mir-148a	microRNA 148a	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr7-1078	chr7	25792117	25793117	+	16.6	1000	Intergenic	Intergenic	196989	NR_029597	406940		NR_029597	ENSG00000199085	MIR148A	MIRN148|MIRN148A|hsa-mir-148|mir-148a	microRNA 148a	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr7-1079	chr7	26016310	26017310	+	15.4	1000	Intergenic	Intergenic	-27204	NR_029597	406940		NR_029597	ENSG00000199085	MIR148A	MIRN148|MIRN148A|hsa-mir-148|mir-148a	microRNA 148a	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr7-108	chr7	418535	420227	+	33.3	1692	promoter-TSS (NR_033960)	promoter-TSS (NR_033960)	-10	NR_033960	442497	Hs.704269	NR_033960	ENSG00000249574	LOC442497	-	uncharacterized LOC442497	ncRNA	33.28	3.88	8.577319588	4.55E-16
chr7-1080	chr7	26576254	26577254	+	14.7	1000	"intron (NR_022006, intron 1 of 1)"	"intron (NR_022006, intron 1 of 1)"	1690	NR_022006	9808	Hs.69749	NM_014769	ENSG00000122548	KIAA0087	-	KIAA0087 lncRNA	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr7-1085	chr7	27278168	27281722	+	50.6	3554	Intergenic	Intergenic	-2219	NM_001989	2128	Hs.369879	NM_001989	ENSG00000106038	EVX1	EVX-1	even-skipped homeobox 1	protein-coding	50.57	3.88	13.03350515	1.59E-29
chr7-1086	chr7	27486177	27487177	+	16	1000	Intergenic	L1MB8|LINE|L1	-168916	NR_122122	790953	Hs.571330	NR_122122		TSL	-	"testis-expressed, seven-twelve, leukemia"	ncRNA	16	1.94	8.24742268	7.67E-08
chr7-1087	chr7	28229308	28230308	+	15.4	1000	"intron (NR_034097, intron 2 of 3)"	"intron (NR_034097, intron 2 of 3)"	-9371	NM_175061	221895	Hs.368944	NM_175061	ENSG00000153814	JAZF1	TIP27|ZNF802	JAZF zinc finger 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr7-1092	chr7	29185156	29187263	+	34.6	2107	promoter-TSS (NM_031311)	promoter-TSS (NM_031311)	46	NM_001293069	1124	Hs.654611	NM_004067	ENSG00000106069	CHN2	ARHGAP3|BCH|CHN2-3|RHOGAP3	chimerin 2	protein-coding	34.56	4.85	7.125773196	1.02E-14
chr7-1093	chr7	29233479	29235543	+	35.8	2064	"5' UTR (NM_004067, exon 1 of 13)"	"5' UTR (NM_004067, exon 1 of 13)"	390	NM_001293071	1124	Hs.654611	NM_004067	ENSG00000106069	CHN2	ARHGAP3|BCH|CHN2-3|RHOGAP3	chimerin 2	protein-coding	35.84	3.88	9.237113402	5.49E-18
chr7-1094	chr7	29841160	29842160	+	16	1000	Intergenic	L2b|LINE|L2	-4510	NM_001080529	644150	Hs.380698	NM_001080529	ENSG00000122574	WIPF3	CR16	WAS/WASL interacting protein family member 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr7-1096	chr7	30280759	30281759	+	16	1000	Intergenic	AluJr|SINE|Alu	-42664	NM_147128	223082	Hs.263912	NM_147128	ENSG00000180233	ZNRF2	RNF202	zinc and ring finger 2	protein-coding	16	2.43	6.58436214	7.90E-07
chr7-110	chr7	6654219	6655544	+	25.6	1325	promoter-TSS (NM_017560)	promoter-TSS (NM_017560)	-646	NM_017560	54753	Hs.592170	NM_017560	ENSG00000236609	ZNF853	-	zinc finger protein 853	protein-coding	25.6	2.91	8.797250859	6.53E-13
chr7-1100	chr7	34218314	34219314	+	16	1000	Intergenic	LTR33|LTR|ERVL	274291	NM_133468	168667	Hs.660998	NM_133468	ENSG00000164619	BMPER	CRIM3|CV-2|CV2	BMP binding endothelial regulator	protein-coding	16	3.88	4.12371134	7.91E-05
chr7-1102	chr7	35550622	35551937	+	18.6	1315	Intergenic	Intergenic	183493	NM_022373	64224	Hs.643051	NM_022373	ENSG00000122557	HERPUD2	-	HERPUD family member 2	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr7-1106	chr7	39445638	39446638	+	15.4	1000	promoter-TSS (NR_046711)	promoter-TSS (NR_046711)	-193	NR_046711	100861520	Hs.571292	NR_046711	ENSG00000224122	POU6F2-AS1	-	POU6F2 antisense RNA 1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr7-1107	chr7	41741343	41742864	+	22.4	1521	"intron (NM_002192, intron 1 of 2)"	"intron (NM_002192, intron 1 of 2)"	603	NM_002192	3624	Hs.28792	NM_002192	ENSG00000122641	INHBA	EDF|FRP	inhibin beta A subunit	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr7-1108	chr7	42513534	42514534	+	16	1000	Intergenic	MIR3|SINE|MIR	232012	NR_110833	101928795	Hs.566753	NR_110833	ENSG00000238284	LINC01448	-	long intergenic non-protein coding RNA 1448	ncRNA	16	2.91	5.498281787	4.98E-06
chr7-1110	chr7	43340734	43341734	+	16.6	1000	"intron (NM_015052, intron 3 of 29)"	AluSq2|SINE|Alu	150740	NR_037508	100500829		NR_037508	ENSG00000264069	MIR3943	-	microRNA 3943	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr7-1113	chr7	44263349	44266241	+	39.7	2892	"intron (NM_172084, intron 12 of 15)"	"intron (NM_172084, intron 12 of 15)"	24217	NM_006555	10652	Hs.520794	NM_006555	ENSG00000106636	YKT6	-	YKT6 v-SNARE homolog (S. cerevisiae)	protein-coding	39.69	5.34	7.43258427	3.64E-17
chr7-1116	chr7	44313343	44314593	+	17.9	1250	"intron (NM_172079, intron 2 of 19)"	"intron (NM_172079, intron 2 of 19)"	51262	NM_172079	816	Hs.351887	NM_001220	ENSG00000058404	CAMK2B	CAM2|CAMK2|CAMKB	calcium/calmodulin dependent protein kinase II beta	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr7-1123	chr7	47939749	47940749	+	16	1000	"intron (NM_138295, intron 13 of 56)"	AluSx|SINE|Alu	47822	NM_138295	168507	Hs.195979	NM_138295	ENSG00000158683	PKD1L1	HTX8|PRO19563	"polycystin 1 like 1, transient receptor potential channel interacting"	protein-coding	16	0.97	16.49484536	3.54E-11
chr7-1124	chr7	49715018	49716389	+	21.8	1371	Intergenic	Intergenic	-97554	NM_198570	375567	Hs.629302	NM_198570	ENSG00000188730	VWC2	PSST739|UNQ739	von Willebrand factor C domain containing 2	protein-coding	21.76	4.37	4.979405034	1.32E-07
chr7-1128	chr7	50887102	50888102	+	16.6	1000	Intergenic	AluY|SINE|Alu	-26443	NM_001001555	2887	Hs.164060	NM_005311	ENSG00000106070	GRB10	GRB-IR|Grb-10|IRBP|MEG1|RSS	growth factor receptor bound protein 10	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr7-1130	chr7	51250800	51251800	+	16.6	1000	"intron (NM_001287438, intron 5 of 7)"	"intron (NM_001287438, intron 5 of 7)"	133258	NM_015198	23242	Hs.99141	NM_015198	ENSG00000106078	COBL	-	cordon-bleu WH2 repeat protein	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr7-1140	chr7	77710391	77711391	+	16	1000	"intron (NM_001301128, intron 19 of 20)"	L2c|LINE|L2	241444	NM_001127357	57157	Hs.203965	NM_020432	ENSG00000006576	PHTF2	-	putative homeodomain transcription factor 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr7-1141	chr7	77803786	77804786	+	16	1000	"intron (NM_001301128, intron 13 of 20)"	MER77B|LTR|ERVL	-172273	NR_003680	399670	Hs.568045	NR_003680	ENSG00000231322	RPL13AP17	RPL13A_6_816	ribosomal protein L13a pseudogene 17	pseudo	16	2.91	5.498281787	4.98E-06
chr7-1144	chr7	93686016	93687016	+	16.6	1000	Intergenic	MLT1G3|LTR|ERVL-MaLR	-52822	NM_005868	10282	Hs.489132	NM_005868	ENSG00000105829	BET1	HBET1	Bet1 golgi vesicular membrane trafficking protein	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr7-1145	chr7	95411654	95412654	+	16.6	1000	"intron (NM_001278422, intron 1 of 15)"	LTR1B|LTR|ERV1	10336	NM_001135556	1780	Hs.440364	NM_004411	ENSG00000158560	DYNC1I1	DNCI1|DNCIC1	dynein cytoplasmic 1 intermediate chain 1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr7-1147	chr7	96632987	96634760	+	28.8	1773	"intron (NR_015448, intron 1 of 2)"	"intron (NR_015448, intron 1 of 2)"	-1417	NM_005222	1750	Hs.249196	NM_005222	ENSG00000006377	DLX6	-	distal-less homeobox 6	protein-coding	28.8	6.31	4.564183835	1.42E-08
chr7-1148	chr7	96647383	96649144	+	26.9	1761	Intergenic	Intergenic	-4886	NR_015448	285987	Hs.34969	NR_015448		DLX6-AS1	DLX6-AS|DLX6AS|Evf-2|NCRNA00212	DLX6 antisense RNA 1	ncRNA	26.88	2.43	11.0617284	2.19E-15
chr7-1151	chr7	97701304	97702304	+	16	1000	Intergenic	AluSx1|SINE|Alu	-34393	NM_014916	22853	Hs.444179	NM_014916	ENSG00000164715	LMTK2	AATYK2|BREK|KPI-2|KPI2|LMR2|PPP1R100|cprk|hBREK	lemur tyrosine kinase 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr7-1156	chr7	100363015	100364015	+	16.6	1000	"intron (NM_003386, intron 23 of 48)"	AluSc|SINE|Alu	32266	NR_111917	7455	Hs.307004	NM_003386	ENSG00000146839	ZAN	-	zonadhesin (gene/pseudogene)	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr7-1157	chr7	100627276	100628276	+	16	1000	"intron (NM_001164462, intron 1 of 11)"	AluSx1|SINE|Alu	14872	NM_001164462	10071	Hs.489355	NM_001164462	ENSG00000205277	MUC12	MUC-11|MUC-12|MUC11	"mucin 12, cell surface associated"	protein-coding	16	0.97	16.49484536	3.54E-11
chr7-1158	chr7	100704845	100705845	+	16	1000	Intergenic	MIR|SINE|MIR	-23375	NM_030961	81844	Hs.521092	NM_030961	ENSG00000169871	TRIM56	RNF109	tripartite motif containing 56	protein-coding	16	1.94	8.24742268	7.67E-08
chr7-1159	chr7	100791479	100792479	+	16	1000	Intergenic	AluJb|SINE|Alu	-5707	NM_001283	1174	Hs.489365	NM_001283	ENSG00000106367	AP1S1	AP19|CLAPS1|EKV3|MEDNIK|SIGMA1A	adaptor related protein complex 1 sigma 1 subunit	protein-coding	16	1.94	8.24742268	7.67E-08
chr7-1160	chr7	101058235	101059235	+	16	1000	"intron (NM_001278563, intron 1 of 13)"	"intron (NM_001278563, intron 1 of 13)"	52634	NM_001278563	136227	Hs.654854	NM_133457	ENSG00000160963	COL26A1	EMI6|EMID2|EMU2|SH2B	collagen type XXVI alpha 1 chain	protein-coding	16	1.46	10.95890411	3.44E-09
chr7-1161	chr7	101174056	101175056	+	16.6	1000	"intron (NM_001278563, intron 3 of 13)"	"intron (NM_001278563, intron 3 of 13)"	37730	NR_103748	100506527	Hs.535863	NR_103747	ENSG00000233123	LINC01007	-	long intergenic non-protein coding RNA 1007	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr7-1166	chr7	104250463	104251463	+	16	1000	"intron (NM_199000, intron 1 of 2)"	MLT2B4|LTR|ERVL	193576	NR_034141	645591	Hs.658835	NR_034141	ENSG00000226869	LHFPL3-AS1	-	LHFPL3 antisense RNA 1	ncRNA	16	3.88	4.12371134	7.91E-05
chr7-1167	chr7	104545926	104546926	+	16.6	1000	"intron (NR_027374, intron 3 of 3)"	"intron (NR_027374, intron 3 of 3)"	20666	NR_027374	723809	Hs.124316	NR_027374	ENSG00000225329	LHFPL3-AS2	-	LHFPL3 antisense RNA 2	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr7-1168	chr7	105328767	105329767	+	16.6	1000	"intron (NM_020725, intron 3 of 11)"	"intron (NM_020725, intron 3 of 11)"	-9619	NM_001318229	222255	Hs.745056	NM_020725	ENSG00000146776	ATXN7L1	ATXN7L4	ataxin 7 like 1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr7-1169	chr7	105343280	105344631	+	20.5	1351	"intron (NM_020725, intron 3 of 11)"	LTR82A|LTR|ERVL	-24307	NM_001318229	222255	Hs.745056	NM_020725	ENSG00000146776	ATXN7L1	ATXN7L4	ataxin 7 like 1	protein-coding	20.48	1.46	14.02739726	1.29E-13
chr7-1172	chr7	105394738	105395738	+	16	1000	"intron (NM_020725, intron 3 of 11)"	L2a|LINE|L2	-75590	NM_001318229	222255	Hs.745056	NM_020725	ENSG00000146776	ATXN7L1	ATXN7L4	ataxin 7 like 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr7-1173	chr7	105398279	105399279	+	16	1000	"intron (NM_020725, intron 3 of 11)"	MIRb|SINE|MIR	-79131	NM_001318229	222255	Hs.745056	NM_020725	ENSG00000146776	ATXN7L1	ATXN7L4	ataxin 7 like 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr7-1174	chr7	105627523	105628873	+	21.1	1350	"intron (NM_152750, intron 4 of 18)"	"intron (NM_152750, intron 4 of 18)"	24541	NM_001301161	222256	Hs.150120	NM_152750	ENSG00000128536	CDHR3	CDH28	cadherin related family member 3	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr7-1175	chr7	105693703	105695279	+	25	1576	Intergenic	Intergenic	58300	NM_182715	6856	Hs.80919	NM_006754	ENSG00000008282	SYPL1	H-SP1|SYPL	synaptophysin like 1	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr7-1182	chr7	107704426	107705426	+	15.4	1000	"intron (NM_007356, intron 21 of 33)"	"intron (NM_007356, intron 21 of 33)"	-61122	NM_002291	3912	Hs.650585	NM_002291	ENSG00000091136	LAMB1	CLM|LIS5	laminin subunit beta 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr7-1183	chr7	108488741	108489741	+	16	1000	Intergenic	Intergenic	35403	NM_001024607	154907	Hs.276325	NM_001024607		C7orf66	-	chromosome 7 open reading frame 66	protein-coding	16	1.46	10.95890411	3.44E-09
chr7-1184	chr7	112163110	112164110	+	16	1000	Intergenic	Intergenic	42544	NM_182597	286006	Hs.396189	NM_182597	ENSG00000181016	LSMEM1	C7orf53	leucine rich single-pass membrane protein 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr7-1185	chr7	116175752	116176752	+	16	1000	"intron (NM_001172895, intron 2 of 2)"	"intron (NM_001172895, intron 2 of 2)"	9840	NM_001172897	857	Hs.74034	NM_001753	ENSG00000105974	CAV1	BSCL3|CGL3|LCCNS|MSTP085|PPH3|VIP21	caveolin 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr7-1187	chr7	120628023	120629842	+	27.5	1819	promoter-TSS (NM_001105533)	promoter-TSS (NM_001105533)	181	NM_024913	79974	Hs.189652	NM_024913	ENSG00000106034	CPED1	C7orf58	cadherin like and PC-esterase domain containing 1	protein-coding	27.52	5.82	4.728522337	1.71E-08
chr7-1191	chr7	127822340	127823340	+	16.6	1000	Intergenic	HAL1|LINE|L1	-25085	NR_029596	406917		NR_029596	ENSG00000207705	MIR129-1	MIR-129b|MIRN129-1|mir-129-1	microRNA 129-1	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr7-1194	chr7	128335637	128339262	+	55	3625	Intergenic	Intergenic	-11666	NR_104243	84691	Hs.732440	NM_032599	ENSG00000135248	FAM71F1	FAM137A|NYD-SP18	family with sequence similarity 71 member F1	protein-coding	55.05	11.65	4.725321888	4.03E-16
chr7-1196	chr7	128553918	128555273	+	19.8	1355	Intergenic	Intergenic	-3822	NM_199349	375616	Hs.371746	NM_199349	ENSG00000135253	KCP	CRIM2|KCP1|NET67	kielin/chordin-like protein	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr7-1202	chr7	129970325	129971325	+	16	1000	Intergenic	AluSc|SINE|Alu	-13805	NM_001318223	93979	Hs.567642	NM_080385	ENSG00000158525	CPA5	-	carboxypeptidase A5	protein-coding	16	2.91	5.498281787	4.98E-06
chr7-1205	chr7	131858063	131859063	+	15.4	1000	"intron (NM_020911, intron 21 of 31)"	"intron (NM_020911, intron 21 of 31)"	-87057	NR_134565	101928807	Hs.552131	NR_134565		LOC101928807	-	uncharacterized LOC101928807	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr7-1206	chr7	131982717	131983717	+	16	1000	"intron (NM_020911, intron 3 of 31)"	"intron (NM_020911, intron 3 of 31)"	37597	NR_134565	101928807	Hs.552131	NR_134565		LOC101928807	-	uncharacterized LOC101928807	ncRNA	16	2.91	5.498281787	4.98E-06
chr7-1207	chr7	132012638	132015556	+	44.8	2918	"intron (NM_020911, intron 3 of 31)"	"intron (NM_020911, intron 3 of 31)"	68477	NR_134565	101928807	Hs.552131	NR_134565		LOC101928807	-	uncharacterized LOC101928807	ncRNA	44.81	7.28	6.15521978	1.03E-16
chr7-121	chr7	155039468	155041169	+	33.3	1701	Intergenic	Intergenic	-49164	NM_001346590	3638	Hs.520819	NM_005542	ENSG00000186480	INSIG1	CL6	insulin induced gene 1	protein-coding	33.28	3.4	9.788235294	2.03E-17
chr7-1211	chr7	132294825	132295825	+	16	1000	"intron (NM_181775, intron 2 of 4)"	"intron (NM_181775, intron 2 of 4)"	-34002	NM_001105543	91584	Hs.511454	NM_020911	ENSG00000221866	PLXNA4	FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003	plexin A4	protein-coding	16	2.91	5.498281787	4.98E-06
chr7-1212	chr7	132788529	132789529	+	16	1000	"intron (NR_133931, intron 1 of 2)"	"intron (NR_133931, intron 1 of 2)"	4242	NR_133931	105375512	Hs.521205	NR_133931		LOC105375512	-	uncharacterized LOC105375512	ncRNA	16	1.46	10.95890411	3.44E-09
chr7-1214	chr7	134984906	134986398	+	23	1492	Intergenic	LTR19B|LTR|ERV1	68921	NM_182489	346673	Hs.592279	NM_182489	ENSG00000146857	STRA8	-	stimulated by retinoic acid 8	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr7-1216	chr7	138575996	138576996	+	16	1000	"intron (NM_020910, intron 10 of 19)"	"intron (NM_020910, intron 10 of 19)"	89568	NM_020910	57670	Hs.605380	NM_020910	ENSG00000122778	KIAA1549	-	KIAA1549	protein-coding	16	0.97	16.49484536	3.54E-11
chr7-1217	chr7	138648672	138649672	+	16	1000	"intron (NM_020910, intron 1 of 19)"	MIR|SINE|MIR	16892	NM_020910	57670	Hs.605380	NM_020910	ENSG00000122778	KIAA1549	-	KIAA1549	protein-coding	16	1.94	8.24742268	7.67E-08
chr7-1220	chr7	140336773	140339474	+	42.9	2701	"intron (NM_001318053, intron 1 of 13)"	L4|LINE|RTE	2453	NM_001318052	27147	Hs.6385	NM_015689	ENSG00000146966	DENND2A	FAM31D|KIAA1277	DENN domain containing 2A	protein-coding	42.89	7.77	5.51994852	2.23E-14
chr7-1221	chr7	141087481	141090308	+	38.4	2827	"intron (NM_001195278, intron 2 of 3)"	"intron (NM_001195278, intron 2 of 3)"	-162184	NM_018238	55750	Hs.743318	NM_018238	ENSG00000006530	AGK	CATC5|CTRCT38|MTDPS10|MULK	acylglycerol kinase	protein-coding	38.4	6.8	5.647058824	1.26E-13
chr7-1223	chr7	142660293	142662221	+	30.1	1928	Intergenic	Intergenic	-1754	NM_000420	3792	Hs.368588	NM_000420	ENSG00000197993	KEL	CD238|ECE3	"Kell blood group, metallo-endopeptidase"	protein-coding	30.08	1.94	15.50515464	1.31E-19
chr7-1225	chr7	143057217	143062384	+	96.7	5167	promoter-TSS (NM_001278297)	promoter-TSS (NM_001278297)	40	NM_001278297	9715	Hs.648908	NM_014690	ENSG00000159784	FAM131B	-	family with sequence similarity 131 member B	protein-coding	96.65	13.11	7.372234935	9.68E-39
chr7-1229	chr7	148280177	148281177	+	16	1000	Intergenic	Intergenic	-6980	NM_145304	202865	Hs.352212	NM_145304	ENSG00000170279	C7orf33	-	chromosome 7 open reading frame 33	protein-coding	16	1.94	8.24742268	7.67E-08
chr7-1233	chr7	149532301	149533301	+	16.6	1000	Intergenic	MER5B|DNA|hAT-Charlie	-2655	NM_001099220	643641	Hs.731923	NM_001099220	ENSG00000106479	ZNF862	-	zinc finger protein 862	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr7-1237	chr7	150781038	150787014	+	121	5976	"exon (NM_001308304, exon 1 of 8)"	"exon (NM_001308304, exon 1 of 8)"	517	NM_001042535	116988	Hs.647075	NM_031946	ENSG00000133612	AGAP3	AGAP-3|CENTG3|CRAG|MRIP-1|cnt-g3	"ArfGAP with GTPase domain, ankyrin repeat and PH domain 3"	protein-coding	120.98	10.68	11.32771536	9.50E-64
chr7-1238	chr7	150802585	150803585	+	16.6	1000	"intron (NM_001042535, intron 1 of 8)"	"intron (NM_001042535, intron 1 of 8)"	-8680	NM_001308305	116988	Hs.647075	NM_031946	ENSG00000133612	AGAP3	AGAP-3|CENTG3|CRAG|MRIP-1|cnt-g3	"ArfGAP with GTPase domain, ankyrin repeat and PH domain 3"	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr7-1245	chr7	151260731	151261731	+	16	1000	"exon (NM_024429, exon 10 of 12)"	"exon (NM_024429, exon 10 of 12)"	-44221	NM_005614	6009	Hs.283521	NM_005614	ENSG00000106615	RHEB	RHEB2	Ras homolog enriched in brain	protein-coding	16	1.94	8.24742268	7.67E-08
chr7-1247	chr7	151330214	151331214	+	16.6	1000	"intron (NM_016203, intron 4 of 15)"	L1MD1|LINE|L1	-1010	NM_001304531	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr7-1248	chr7	151344771	151345771	+	15.4	1000	"intron (NM_016203, intron 4 of 15)"	"intron (NM_016203, intron 4 of 15)"	-15567	NM_001304531	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr7-1249	chr7	151379941	151380941	+	16	1000	"intron (NM_016203, intron 3 of 15)"	MIR3|SINE|MIR	-50737	NM_001304531	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr7-1250	chr7	151384572	151387898	+	48.6	3326	"intron (NM_016203, intron 3 of 15)"	"intron (NM_016203, intron 3 of 15)"	47165	NM_001304527	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	48.65	10.68	4.555243446	5.88E-14
chr7-1254	chr7	151474571	151475571	+	16.6	1000	"intron (NM_016203, intron 3 of 15)"	LTR8A|LTR|ERV1	36886	NM_001040633	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr7-1258	chr7	151526569	151527569	+	16.6	1000	"intron (NM_016203, intron 1 of 15)"	"intron (NM_016203, intron 1 of 15)"	-15112	NM_001040633	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr7-1260	chr7	152591732	152592732	+	16	1000	Intergenic	Intergenic	135398	NR_073000	57180	Hs.647117	NM_020445	ENSG00000133627	ACTR3B	ARP11|ARP3BETA	ARP3 actin related protein 3 homolog B	protein-coding	16	3.4	4.705882353	2.25E-05
chr7-1262	chr7	154441061	154442061	+	15.4	1000	"intron (NM_001936, intron 6 of 25)"	"intron (NM_001936, intron 6 of 25)"	-278666	NR_024477	100132707	Hs.586358	NR_024476	ENSG00000214106	PAXIP1-AS2	PAXIP1OS	PAXIP1 antisense RNA 2	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr7-1263	chr7	154507299	154508299	+	16	1000	"intron (NM_001936, intron 7 of 25)"	L2c|LINE|L2	-212428	NR_024477	100132707	Hs.586358	NR_024476	ENSG00000214106	PAXIP1-AS2	PAXIP1OS	PAXIP1 antisense RNA 2	ncRNA	16	2.91	5.498281787	4.98E-06
chr7-1266	chr7	154643810	154645238	+	23.7	1428	"intron (NM_001936, intron 16 of 25)"	L2a|LINE|L2	-75703	NR_024477	100132707	Hs.586358	NR_024476	ENSG00000214106	PAXIP1-AS2	PAXIP1OS	PAXIP1 antisense RNA 2	ncRNA	23.68	4.85	4.882474227	1.15E-07
chr7-1272	chr7	155046218	155047218	+	16	1000	Intergenic	Intergenic	-42764	NM_001346590	3638	Hs.520819	NM_005542	ENSG00000186480	INSIG1	CL6	insulin induced gene 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr7-1280	chr7	155269976	155270976	+	15.4	1000	Intergenic	Tigger1|DNA|TcMar-Tigger	19652	NM_001427	2020	Hs.134989	NM_001427	ENSG00000164778	EN2	-	engrailed homeobox 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr7-1283	chr7	155335623	155342894	+	102.4	7271	Intergenic	AluSx3|SINE|Alu	-12719	NM_001103176	285888	Hs.146751	NM_001103176	ENSG00000146910	CNPY1	-	canopy FGF signaling regulator 1	protein-coding	102.41	18.93	5.409931326	2.52E-32
chr7-1286	chr7	155625349	155626763	+	21.1	1414	Intergenic	Intergenic	-21089	NM_000193	6469	Hs.164537	NM_000193	ENSG00000164690	SHH	HHG1|HLP3|HPE3|MCOPCB5|SMMCI|TPT|TPTPS	sonic hedgehog	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr7-1290	chr7	155966034	155967321	+	20.5	1287	Intergenic	Intergenic	211351	NM_001291913	389602	Hs.583071	NM_001291913		LOC389602	-	uncharacterized LOC389602	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr7-1293	chr7	156041135	156042412	+	17.9	1277	Intergenic	Intergenic	196509	NR_038232	285889	Hs.407095	NR_038232	ENSG00000233878	LOC285889	-	uncharacterized LOC285889	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr7-1296	chr7	156121876	156122876	+	15.4	1000	Intergenic	Intergenic	115906	NR_038232	285889	Hs.407095	NR_038232	ENSG00000233878	LOC285889	-	uncharacterized LOC285889	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr7-1298	chr7	156254494	156258551	+	50.6	4057	Intergenic	Intergenic	-18240	NR_038232	285889	Hs.407095	NR_038232	ENSG00000233878	LOC285889	-	uncharacterized LOC285889	ncRNA	50.57	11.16	4.531362007	4.90E-14
chr7-1301	chr7	156425555	156426810	+	19.2	1255	Intergenic	Intergenic	7166	NR_026865	129790	Hs.647014	NM_032625	ENSG00000182648	C7orf13	MY040	chromosome 7 open reading frame 13	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr7-1303	chr7	157300695	157301695	+	15.4	1000	Intergenic	Intergenic	42270	NR_110157	101927914	Hs.623826	NR_110157	ENSG00000234210	LOC101927914	-	uncharacterized LOC101927914	ncRNA	15.36	0	15.82260557	1.26E-14
chr7-1304	chr7	157486143	157487143	+	16.6	1000	"intron (NM_130843, intron 11 of 21)"	CpG	-119529	NR_029689	406945		NR_029689	ENSG00000207960	MIR153-2	MIRN153-2|mir-153-2	microRNA 153-2	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr7-1305	chr7	157499551	157502227	+	38.4	2676	"intron (NM_130843, intron 11 of 21)"	"intron (NM_130843, intron 11 of 21)"	-133775	NR_029689	406945		NR_029689	ENSG00000207960	MIR153-2	MIRN153-2|mir-153-2	microRNA 153-2	ncRNA	38.4	5.82	6.597938144	2.56E-15
chr7-1307	chr7	157697073	157698073	+	16	1000	"intron (NM_130843, intron 10 of 21)"	"intron (NM_130843, intron 10 of 21)"	50296	NR_038966	100506585	Hs.661265	NR_038966	ENSG00000233038	LOC100506585	-	uncharacterized LOC100506585	ncRNA	16	3.4	4.705882353	2.25E-05
chr7-1315	chr7	196368	197368	+	16	1000	"intron (NM_020223, intron 2 of 9)"	"intron (NM_020223, intron 2 of 9)"	3899	NM_020223	56975	Hs.134742	NM_020223	ENSG00000177706	FAM20C	DMP-4|DMP4|G-CK|GEF-CK|RNS	"FAM20C, golgi associated secretory pathway kinase"	protein-coding	16	0.97	16.49484536	3.54E-11
chr7-1317	chr7	325800	327262	+	21.1	1462	Intergenic	Intergenic	-3605	NM_001195127	100288524	Hs.702860	NM_001195127		WI2-2373I1.2	-	forkhead box L1-like	ncRNA	21.12	3.88	5.443298969	1.44E-07
chr7-1324	chr7	1280183	1281574	+	19.8	1391	Intergenic	CpG-23802	8224	NM_001080461	340260	Hs.232272	NM_001080461	ENSG00000164853	UNCX	UNCX4.1	UNC homeobox	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr7-1332	chr7	1781370	1782870	+	21.8	1500	promoter-TSS (NR_120508)	promoter-TSS (NR_120508)	-174	NR_120508	101927125	Hs.633957	NR_120508	ENSG00000236081	ELFN1-AS1	MYCLo-2	ELFN1 antisense RNA 1	ncRNA	21.76	1.94	11.21649485	8.00E-13
chr7-1333	chr7	2560603	2564063	+	46.1	3460	"intron (NM_001040167, intron 1 of 7)"	MIRb|SINE|MIR	2854	NM_001040168	3955	Hs.159142	NM_002304	ENSG00000106003	LFNG	SCDO3	LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	protein-coding	46.09	5.82	7.919243986	1.58E-20
chr7-1334	chr7	3342977	3343977	+	15.4	1000	"intron (NM_152744, intron 1 of 44)"	"intron (NM_152744, intron 1 of 44)"	2397	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding	15.36	0	15.82260557	1.26E-14
chr7-1338	chr7	3703666	3704933	+	19.8	1267	"intron (NM_152744, intron 4 of 44)"	AluSx1|SINE|Alu	363219	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr7-1340	chr7	3752778	3753778	+	15.4	1000	"intron (NM_152744, intron 4 of 44)"	"intron (NM_152744, intron 4 of 44)"	412198	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr7-1343	chr7	5302072	5303072	+	16	1000	Intergenic	Intergenic	-19989	NM_153247	222962	Hs.4302	NM_153247	ENSG00000164638	SLC29A4	ENT4|PMAT	solute carrier family 29 member 4	protein-coding	16	0.97	16.49484536	3.54E-11
chr7-1346	chr7	5594472	5595472	+	14.7	1000	Intergenic	CpG	-24740	NM_001101	60	Hs.520640	NM_001101	ENSG00000075624	ACTB	BRWS1|PS1TP5BP1	actin beta	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr7-1347	chr7	5922528	5923528	+	15.4	1000	"intron (NM_001097622, intron 2 of 3)"	"intron (NM_001097622, intron 2 of 3)"	2599	NM_001097622	654231	Hs.571315	NM_001097622	ENSG00000122543	OCM	OCM1|OM|ONCM	oncomodulin	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr7-1349	chr7	7051944	7052944	+	13.4	1000	Intergenic	Intergenic	54232	NR_037454	100500886		NR_037454	ENSG00000266287	MIR3683	-	microRNA 3683	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr7-1350	chr7	8302910	8303910	+	15.4	1000	"intron (NR_125740, intron 2 of 5)"	"intron (NR_125740, intron 2 of 5)"	-1168	NM_004968	3382	Hs.487561	NM_004968	ENSG00000003147	ICA1	ICA69|ICAp69	islet cell autoantigen 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr7-1351	chr7	20816305	20817572	+	19.8	1267	Intergenic	Intergenic	9570	NM_198956	221833	Hs.195922	NM_182700	ENSG00000164651	SP8	BTD	Sp8 transcription factor	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr7-1356	chr7	23290836	23291836	+	14.1	1000	"intron (NM_001005340, intron 1 of 10)"	MLT1L|LTR|ERVL-MaLR	5020	NM_001005340	10457	Hs.190495	NM_002510	ENSG00000136235	GPNMB	HGFIN|NMB	glycoprotein nmb	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr7-1358	chr7	25432115	25433115	+	14.1	1000	Intergenic	Intergenic	-164510	NM_022150	64111	Hs.60473	NM_022150	ENSG00000105954	NPVF	C7orf9|RFRP	neuropeptide VF precursor	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr7-1359	chr7	25584941	25586436	+	23	1495	Intergenic	Intergenic	-317583	NM_022150	64111	Hs.60473	NM_022150	ENSG00000105954	NPVF	C7orf9|RFRP	neuropeptide VF precursor	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr7-1363	chr7	26437011	26439580	+	44.8	2569	"intron (NR_136272, intron 1 of 1)"	CpG	743	NR_136272	105375304	Hs.735352	NR_136270	ENSG00000225792	LOC105375304	-	uncharacterized LOC105375304	ncRNA	44.81	5.82	7.699312715	1.25E-19
chr7-1365	chr7	26507979	26508979	+	15.4	1000	"intron (NR_015364, intron 1 of 4)"	"intron (NR_015364, intron 1 of 4)"	65371	NR_015364	441204	Hs.587432	NR_015364		LOC441204	-	uncharacterized LOC441204	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr7-1366	chr7	26536761	26537761	+	16	1000	Intergenic	Intergenic	41183	NR_022006	9808	Hs.69749	NM_014769	ENSG00000122548	KIAA0087	-	KIAA0087 lncRNA	ncRNA	16	1.94	8.24742268	7.67E-08
chr7-1367	chr7	26579304	26580304	+	15.4	1000	Intergenic	Intergenic	-1360	NR_022006	9808	Hs.69749	NM_014769	ENSG00000122548	KIAA0087	-	KIAA0087 lncRNA	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr7-1370	chr7	26888538	26889538	+	15.4	1000	"intron (NM_001303468, intron 3 of 12)"	AluSx1|SINE|Alu	8304	NM_001303468	8935	Hs.200770	NM_003930	ENSG00000005020	SKAP2	PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R	src kinase associated phosphoprotein 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr7-1371	chr7	26927149	26928149	+	15.4	1000	Intergenic	MLT1J|LTR|ERVL-MaLR	-23287	NM_003930	8935	Hs.200770	NM_003930	ENSG00000005020	SKAP2	PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R	src kinase associated phosphoprotein 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr7-1375	chr7	27255507	27256781	+	20.5	1274	Intergenic	Intergenic	16104	NR_037843	100316868	Hs.199486	NR_037843		HOTTIP	HOXA-AS6|HOXA13-AS1|NCRNA00213	HOXA distal transcript antisense RNA	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr7-1377	chr7	27421800	27422800	+	16	1000	Intergenic	AluSg|SINE|Alu	-135452	NR_120507	101410536	Hs.687800	NR_120507	ENSG00000253405	EVX1-AS	EVX1-AS1	EVX1 antisense RNA	ncRNA	16	3.4	4.705882353	2.25E-05
chr7-1378	chr7	27491746	27492746	+	16	1000	Intergenic	AluY|SINE|Alu	-163347	NR_122122	790953	Hs.571330	NR_122122		TSL	-	"testis-expressed, seven-twelve, leukemia"	ncRNA	16	3.88	4.12371134	7.91E-05
chr7-1379	chr7	28273923	28274923	+	16	1000	"intron (NR_034097, intron 3 of 3)"	"intron (NR_034097, intron 3 of 3)"	-53986	NM_175061	221895	Hs.368944	NM_175061	ENSG00000153814	JAZF1	TIP27|ZNF802	JAZF zinc finger 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr7-1380	chr7	28703615	28704615	+	14.7	1000	"intron (NM_182899, intron 4 of 9)"	"intron (NM_182899, intron 4 of 9)"	-21483	NM_001011666	9586	Hs.437075	NM_004904	ENSG00000146592	CREB5	CRE-BPA|CREB-5	cAMP responsive element binding protein 5	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr7-1381	chr7	28903996	28906528	+	32.6	2532	Intergenic	Intergenic	92767	NM_014817	9865	Hs.744120	NM_014817	ENSG00000255690	TRIL	-	TLR4 interactor with leucine rich repeats	protein-coding	32.64	7.77	4.200772201	7.28E-09
chr7-1384	chr7	29849308	29850308	+	16.6	1000	"intron (NM_001080529, intron 1 of 8)"	"intron (NM_001080529, intron 1 of 8)"	3638	NM_001080529	644150	Hs.380698	NM_001080529	ENSG00000122574	WIPF3	CR16	WAS/WASL interacting protein family member 3	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr7-1386	chr7	30802420	30803420	+	14.7	1000	"intron (NR_037598, intron 2 of 19)"	"intron (NR_037598, intron 2 of 19)"	-8113	NM_032222	84182	Hs.660192	NM_032222	ENSG00000106125	FAM188B	C7orf67	family with sequence similarity 188 member B	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr7-1387	chr7	31479113	31480113	+	16	1000	Intergenic	Intergenic	-74072	NM_001257967	223075	Hs.224269	NM_194300	ENSG00000180347	CCDC129	-	coiled-coil domain containing 129	protein-coding	16	3.88	4.12371134	7.91E-05
chr7-1389	chr7	33150003	33151494	+	20.5	1491	Intergenic	Intergenic	-1746	NM_203288	6100	Hs.326805	NM_203288	ENSG00000164610	RP9	PAP-1|PAP1	retinitis pigmentosa 9 (autosomal dominant)	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr7-1390	chr7	33798497	33799497	+	15.4	1000	Intergenic	Intergenic	-145526	NM_133468	168667	Hs.660998	NM_133468	ENSG00000164619	BMPER	CRIM3|CV-2|CV2	BMP binding endothelial regulator	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr7-1392	chr7	35416264	35417264	+	15.4	1000	TTS (NR_038864)	TTS (NR_038864)	63298	NR_038864	401324	Hs.377034	NR_038864		LOC401324	-	uncharacterized LOC401324	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr7-1395	chr7	35525072	35528476	+	55	3404	Intergenic	Intergenic	173308	NR_038864	401324	Hs.377034	NR_038864		LOC401324	-	uncharacterized LOC401324	ncRNA	55.05	8.74	6.298627002	1.56E-20
chr7-14	chr7	64974026	64975281	+	33.3	1255	Intergenic	CpG	135941	NM_007139	168374	Hs.9521	NM_007139	ENSG00000146757	ZNF92	HEL-203|HPF12|HTF12|TF12	zinc finger protein 92	protein-coding	33.28	4.85	6.86185567	7.28E-14
chr7-1402	chr7	38980449	38981449	+	15.4	1000	Intergenic	AluSg|SINE|Alu	-32149	NM_014396	27072	Hs.592184	NM_014396	ENSG00000006715	VPS41	HVPS41|HVSP41|hVps41p	"VPS41, HOPS complex subunit"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr7-1405	chr7	39536214	39537214	+	15.4	1000	Intergenic	Intergenic	-69261	NM_020192	57002	Hs.72168	NM_020192	ENSG00000241127	YAE1D1	C7orf36|GK003	Yae1 domain containing 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr7-1410	chr7	43292437	43293836	+	18.6	1399	"intron (NM_015052, intron 3 of 29)"	"intron (NM_015052, intron 3 of 29)"	102642	NR_037508	100500829		NR_037508	ENSG00000264069	MIR3943	-	microRNA 3943	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr7-1412	chr7	43364613	43365613	+	15.4	1000	"intron (NM_015052, intron 5 of 29)"	"intron (NM_015052, intron 5 of 29)"	174619	NR_037508	100500829		NR_037508	ENSG00000264069	MIR3943	-	microRNA 3943	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr7-1413	chr7	43417257	43418870	+	25.6	1613	"intron (NM_015052, intron 6 of 29)"	"intron (NM_015052, intron 6 of 29)"	144078	NR_038276	100506895	Hs.676047	NR_038276	ENSG00000231638	LOC100506895	-	lncRNA#32	ncRNA	25.6	3.88	6.597938144	1.00E-10
chr7-1417	chr7	44198914	44199914	+	15.4	1000	promoter-TSS (NM_033508)	promoter-TSS (NM_033508)	-527	NM_033508	2645	Hs.1270	NM_000162	ENSG00000106633	GCK	FGQTL3|GK|GLK|HHF3|HK4|HKIV|HXKP|LGLK|MODY2	glucokinase	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr7-1419	chr7	44268863	44269863	+	16	1000	"intron (NM_001220, intron 17 of 23)"	"intron (NM_001220, intron 17 of 23)"	28785	NM_006555	10652	Hs.520794	NM_006555	ENSG00000106636	YKT6	-	YKT6 v-SNARE homolog (S. cerevisiae)	protein-coding	16	1.94	8.24742268	7.67E-08
chr7-1420	chr7	44272556	44273556	+	14.7	1000	"intron (NM_172082, intron 14 of 19)"	"intron (NM_172082, intron 14 of 19)"	32478	NM_006555	10652	Hs.520794	NM_006555	ENSG00000106636	YKT6	-	YKT6 v-SNARE homolog (S. cerevisiae)	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-1423	chr7	44358955	44359955	+	15.4	1000	"intron (NM_172079, intron 1 of 19)"	"intron (NM_172079, intron 1 of 19)"	5775	NM_172079	816	Hs.351887	NM_001220	ENSG00000058404	CAMK2B	CAM2|CAMK2|CAMKB	calcium/calmodulin dependent protein kinase II beta	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr7-1426	chr7	45155296	45156296	+	15.4	1000	Intergenic	MER21C|LTR|ERVL	-4450	NM_004749	9238	Hs.231411	NM_004749	ENSG00000136270	TBRG4	CPR2|FASTKD4	transforming growth factor beta regulator 4	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr7-1431	chr7	45508511	45509511	+	16	1000	Intergenic	ERVL-B4-int|LTR|ERVL	-104728	NM_001281768	107	Hs.192215	NM_021116	ENSG00000164742	ADCY1	AC1|DFNB44	adenylate cyclase 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr7-1435	chr7	47757313	47758313	+	16	1000	Intergenic	L1MB7|LINE|L1	-43261	NR_038407	84847	Hs.488236	NR_038407	ENSG00000146666	LINC00525	-	long intergenic non-protein coding RNA 525	ncRNA	16	3.4	4.705882353	2.25E-05
chr7-1438	chr7	51237770	51238770	+	14.7	1000	"intron (NM_001287438, intron 5 of 7)"	(TA)n|Simple_repeat|Simple_repeat	146288	NM_015198	23242	Hs.99141	NM_015198	ENSG00000106078	COBL	-	cordon-bleu WH2 repeat protein	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-144	chr7	155169433	155177513	+	171.5	8080	Intergenic	Intergenic	-12845	NR_103545	338436	Hs.521326	NR_103545	ENSG00000204960	BLACE	-	B-cell acute lymphoblastic leukemia expressed	ncRNA	171.54	18.93	9.061806656	1.24E-78
chr7-1442	chr7	51538714	51540533	+	36.5	1819	Intergenic	Intergenic	-155065	NM_001287436	23242	Hs.99141	NM_015198	ENSG00000106078	COBL	-	cordon-bleu WH2 repeat protein	protein-coding	36.48	3.88	9.402061856	5.49E-18
chr7-1443	chr7	55176551	55177994	+	19.2	1443	promoter-TSS (NM_001346900)	promoter-TSS (NM_001346900)	-238	NM_001346900	1956	Hs.488293	NM_005228	ENSG00000146648	EGFR	ERBB|ERBB1|HER1|NISBD2|PIG61|mENA	epidermal growth factor receptor	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr7-1444	chr7	55247374	55248374	+	16	1000	"non-coding (NR_047551, exon 2 of 2)"	"non-coding (NR_047551, exon 2 of 2)"	8768	NR_047551	100507500	Hs.720489	NR_047551	ENSG00000224057	EGFR-AS1	-	EGFR antisense RNA 1	ncRNA	16	2.91	5.498281787	4.98E-06
chr7-1445	chr7	66952930	66953930	+	16	1000	Intergenic	AluJr|SINE|Alu	152467	NR_108104	101929736	Hs.634050	NR_108104	ENSG00000235475	LINC01372	-	long intergenic non-protein coding RNA 1372	ncRNA	16	1.46	10.95890411	3.44E-09
chr7-1446	chr7	67353228	67354228	+	14.1	1000	Intergenic	SVA_F|Other|Other	-131512	NR_120514	102723427	Hs.583491	NR_120514	ENSG00000225209	LOC102723427	-	uncharacterized LOC102723427	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr7-1447	chr7	71039135	71040135	+	15.4	1000	"intron (NM_022479, intron 6 of 10)"	MER5A|DNA|hAT-Charlie	-266879	NR_037477	100500836		NR_037477	ENSG00000265878	MIR3914-1	-	microRNA 3914-1	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr7-1448	chr7	73041386	73042678	+	19.8	1292	Intergenic	L2c|LINE|L2	-3159	NR_134541	51085	Hs.647055	NM_032951	ENSG00000009950	MLXIPL	CHREBP|MIO|MLX|MONDOB|WBSCR14|WS-bHLH|bHLHd14	MLX interacting protein like	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr7-145	chr7	155247756	155248756	+	21.8	1000	Intergenic	CpG	-2568	NM_001427	2020	Hs.134989	NM_001427	ENSG00000164778	EN2	-	engrailed homeobox 2	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr7-1451	chr7	73677806	73678806	+	14.7	1000	Intergenic	Intergenic	-9518	NM_181471	5982	Hs.647062	NM_002914	ENSG00000049541	RFC2	RFC40	replication factor C subunit 2	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr7-1452	chr7	77739910	77740910	+	15.4	1000	"intron (NM_001301128, intron 19 of 20)"	"intron (NM_001301128, intron 19 of 20)"	-236149	NR_003680	399670	Hs.568045	NR_003680	ENSG00000231322	RPL13AP17	RPL13A_6_816	ribosomal protein L13a pseudogene 17	pseudo	15.36	0.97	15.83505155	3.54E-11
chr7-1453	chr7	78026880	78028338	+	21.8	1458	"intron (NM_001301128, intron 6 of 20)"	"intron (NM_001301128, intron 6 of 20)"	51050	NR_003680	399670	Hs.568045	NR_003680	ENSG00000231322	RPL13AP17	RPL13A_6_816	ribosomal protein L13a pseudogene 17	pseudo	21.76	4.37	4.979405034	1.32E-07
chr7-1457	chr7	86628955	86629955	+	15.4	1000	"intron (NM_001142749, intron 1 of 21)"	"intron (NM_001142749, intron 1 of 21)"	-34164	NM_152748	222223	Hs.208093	NM_152748	ENSG00000164659	KIAA1324L	EIG121L	KIAA1324 like	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr7-1458	chr7	90890793	90891793	+	16	1000	Intergenic	Intergenic	-2490	NM_003505	8321	Hs.94234	NM_003505	ENSG00000157240	FZD1	-	frizzled class receptor 1	protein-coding	16	0	16.4818808	1.26E-14
chr7-1460	chr7	96105411	96106411	+	16	1000	Intergenic	Tigger4b|DNA|TcMar-Tigger	26924	NM_001201450	401388	Hs.734935	NM_207503	ENSG00000127922	C7orf76	-	chromosome 7 open reading frame 76	protein-coding	16	3.4	4.705882353	2.25E-05
chr7-1464	chr7	100099974	100100974	+	16	1000	Intergenic	AluSx1|SINE|Alu	18924	NM_173564	222950	Hs.320086	NM_173564	ENSG00000166924	NYAP1	C7orf51	neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr7-1465	chr7	100327843	100328843	+	14.7	1000	Intergenic	Intergenic	-2906	NR_111918	7455	Hs.307004	NM_003386	ENSG00000146839	ZAN	-	zonadhesin (gene/pseudogene)	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr7-1467	chr7	100347865	100348865	+	13.4	1000	"exon (NM_173059, exon 12 of 47)"	"exon (NM_173059, exon 12 of 47)"	17116	NR_111917	7455	Hs.307004	NM_003386	ENSG00000146839	ZAN	-	zonadhesin (gene/pseudogene)	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr7-1469	chr7	100370729	100371729	+	14.7	1000	"intron (NM_003386, intron 30 of 48)"	"intron (NM_003386, intron 30 of 48)"	39980	NR_111917	7455	Hs.307004	NM_003386	ENSG00000146839	ZAN	-	zonadhesin (gene/pseudogene)	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr7-1470	chr7	100648101	100649101	+	16	1000	"exon (NM_001164462, exon 2 of 12)"	"exon (NM_001164462, exon 2 of 12)"	12288	NR_120519	102724094	Hs.571256	NR_120519	ENSG00000227053	LOC102724094	-	uncharacterized LOC102724094	ncRNA	16	2.43	6.58436214	7.90E-07
chr7-1474	chr7	101005779	101007520	+	25.6	1741	"intron (NM_001278563, intron 1 of 13)"	CpG	548	NM_001278563	136227	Hs.654854	NM_133457	ENSG00000160963	COL26A1	EMI6|EMID2|EMU2|SH2B	collagen type XXVI alpha 1 chain	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr7-1476	chr7	103055337	103056337	+	15.4	1000	"intron (NR_135801, intron 4 of 17)"	HAL1|LINE|L1	27821	NR_120443	375611	Hs.585146	NM_198999	ENSG00000170615	SLC26A5	DFNB61|PRES	solute carrier family 26 member 5	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr7-1477	chr7	103085205	103086804	+	27.5	1599	"non-coding (NR_110141, exon 1 of 4)"	"non-coding (NR_110141, exon 1 of 4)"	350	NR_110141	101927870	Hs.736927	NR_110141	ENSG00000234715	LOC101927870	-	uncharacterized LOC101927870	ncRNA	27.52	2.91	9.457044674	7.03E-14
chr7-1478	chr7	103962351	103963351	+	14.7	1000	Intergenic	L1M4b|LINE|L1	-6253	NM_199000	375612	Hs.659164	NM_199000	ENSG00000187416	LHFPL3	LHFPL4	lipoma HMGIC fusion partner-like 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr7-148	chr7	156810649	156816965	+	113.3	6316	Intergenic	CpG	10256	NR_038835	645249	Hs.224879	NR_038835	ENSG00000243479	MNX1-AS1	CCAT5	MNX1 antisense RNA 1 (head to head)	ncRNA	113.29	11.16	10.15143369	5.72E-56
chr7-1485	chr7	105580617	105581966	+	20.5	1349	Intergenic	Intergenic	-22366	NM_152750	222256	Hs.150120	NM_152750	ENSG00000128536	CDHR3	CDH28	cadherin related family member 3	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr7-1492	chr7	106020821	106021821	+	17.9	1000	Intergenic	Intergenic	-95683	NM_005746	10135	Hs.489615	NM_005746	ENSG00000105835	NAMPT	1110035O14Rik|PBEF|PBEF1|VF|VISFATIN	nicotinamide phosphoribosyltransferase	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr7-1499	chr7	116196033	116197033	+	16	1000	"intron (NM_001172895, intron 2 of 2)"	MIRb|SINE|MIR	30121	NM_001172897	857	Hs.74034	NM_001753	ENSG00000105974	CAV1	BSCL3|CGL3|LCCNS|MSTP085|PPH3|VIP21	caveolin 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr7-1503	chr7	116482356	116483356	+	15.4	1000	Intergenic	AluJo|SINE|Alu	-19707	NM_006136	830	Hs.446123	NM_006136	ENSG00000198898	CAPZA2	CAPPA2|CAPZ	capping actin protein of muscle Z-line alpha subunit 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr7-1506	chr7	126963165	126964165	+	15.4	1000	Intergenic	MER91B|DNA|hAT-Tip100	69113	NM_176814	168850	Hs.159006	NM_176814	ENSG00000048405	ZNF800	-	zinc finger protein 800	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr7-1508	chr7	127283762	127284762	+	14.7	1000	Intergenic	AluSc|SINE|Alu	-7781	NM_014390	27044	Hs.122523	NM_014390	ENSG00000197157	SND1	TDRD11|Tudor-SN|p100	staphylococcal nuclease and tudor domain containing 1	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr7-1509	chr7	127799881	127800881	+	14.7	1000	Intergenic	L2c|LINE|L2	-47544	NR_029596	406917		NR_029596	ENSG00000207705	MIR129-1	MIR-129b|MIRN129-1|mir-129-1	microRNA 129-1	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr7-1510	chr7	128056317	128057317	+	16	1000	Intergenic	Intergenic	-6776	NM_001304521	3614	Hs.654401	NM_000883	ENSG00000106348	IMPDH1	IMPD|IMPD1|IMPDH-I|LCA11|RP10|sWSS2608	inosine monophosphate dehydrogenase 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr7-1511	chr7	128087311	128088311	+	16	1000	Intergenic	ORSL-2a|DNA|hAT-Tip100	-8073	NM_001098786	29923	Hs.706124	NM_013332	ENSG00000135245	HILPDA	C7orf68|HIG-2|HIG2	hypoxia inducible lipid droplet associated	protein-coding	16	1.94	8.24742268	7.67E-08
chr7-1513	chr7	128469447	128470880	+	17.9	1433	promoter-TSS (NM_001458)	promoter-TSS (NM_001458)	-320	NM_001458	2318	Hs.58414	NM_001458	ENSG00000128591	FLNC	ABP-280|ABP280A|ABPA|ABPL|CMH26|FLN2|MFM5|MPD4|RCM5	filamin C	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr7-1515	chr7	129431311	129432311	+	16	1000	Intergenic	Intergenic	-16957	NR_029615	406959		NR_029615	ENSG00000207691	MIR183	MIRN183|miR-183|miRNA183	microRNA 183	ncRNA	16	3.88	4.12371134	7.91E-05
chr7-1518	chr7	131442242	131443242	+	14.1	1000	Intergenic	Intergenic	-152237	NR_110836	101928782	Hs.571369	NR_110836	ENSG00000224865	LOC101928782	-	uncharacterized LOC101928782	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr7-1521	chr7	131778175	131779175	+	16	1000	Intergenic	Intergenic	-166945	NR_134565	101928807	Hs.552131	NR_134565		LOC101928807	-	uncharacterized LOC101928807	ncRNA	16	3.88	4.12371134	7.91E-05
chr7-1524	chr7	134109247	134110247	+	14.7	1000	Intergenic	LTR81B|LTR|Gypsy	34197	NR_144376	231	Hs.521212	NM_001628	ENSG00000085662	AKR1B1	ADR|ALDR1|ALR2|AR	aldo-keto reductase family 1 member B	protein-coding	14.72	0	15.16333034	3.99E-13
chr7-1528	chr7	137269854	137270854	+	14.1	1000	"intron (NM_001321709, intron 14 of 33)"	"intron (NM_001321709, intron 14 of 33)"	-241618	NM_002825	5764	Hs.371249	NM_002825	ENSG00000105894	PTN	HARP|HB-GAM|HBBM|HBGF-8|HBGF8|HBNF|HBNF-1|NEGF1|OSF-1	pleiotrophin	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr7-1541	chr7	141077532	141079450	+	28.2	1918	"intron (NM_001195278, intron 2 of 3)"	"intron (NM_001195278, intron 2 of 3)"	-172587	NM_018238	55750	Hs.743318	NM_018238	ENSG00000006530	AGK	CATC5|CTRCT38|MTDPS10|MULK	acylglycerol kinase	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr7-1542	chr7	141142493	141143493	+	14.7	1000	"intron (NM_001195278, intron 3 of 3)"	L1MC3|LINE|L1	-108085	NM_018238	55750	Hs.743318	NM_018238	ENSG00000006530	AGK	CATC5|CTRCT38|MTDPS10|MULK	acylglycerol kinase	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr7-1547	chr7	143027217	143028217	+	15.4	1000	"intron (NR_046453, intron 7 of 21)"	"intron (NR_046453, intron 7 of 21)"	14498	NR_046453	1180	Hs.121483	NM_000083	ENSG00000188037	CLCN1	CLC1	chloride voltage-gated channel 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr7-1553	chr7	147904895	147907965	+	44.8	3070	"intron (NM_014141, intron 18 of 23)"	AluJo|SINE|Alu	279745	NR_036093	100422849		NR_036093	ENSG00000221296	MIR548T	-	microRNA 548t	ncRNA	44.81	7.77	5.767052767	6.82E-16
chr7-1554	chr7	147966954	147968214	+	19.8	1260	"intron (NM_014141, intron 21 of 23)"	L2c|LINE|L2	-320073	NM_145304	202865	Hs.352212	NM_145304	ENSG00000170279	C7orf33	-	chromosome 7 open reading frame 33	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr7-1567	chr7	150484307	150485307	+	14.7	1000	Intergenic	Intergenic	12814	NM_001101314	28959	Hs.647090	NM_014020	ENSG00000106565	TMEM176B	LR8|MS4B2	transmembrane protein 176B	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr7-157	chr7	30990100	30991100	+	20.5	1000	Intergenic	MSTB1|LTR|ERVL-MaLR	-13036	NM_000823	2692	Hs.767	NM_000823	ENSG00000106128	GHRHR	GHRFR|GRFR|IGHD1B	growth hormone releasing hormone receptor	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr7-1571	chr7	150494822	150495822	+	15.4	1000	"intron (NM_001101311, intron 1 of 6)"	"intron (NM_001101311, intron 1 of 6)"	2299	NM_001101314	28959	Hs.647090	NM_014020	ENSG00000106565	TMEM176B	LR8|MS4B2	transmembrane protein 176B	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr7-1575	chr7	150632852	150633852	+	16	1000	Intergenic	Intergenic	19565	NM_001204798	3757	Hs.647099	NM_000238	ENSG00000055118	KCNH2	ERG-1|ERG1|H-ERG|HERG|HERG1|Kv11.1|LQT2|SQT1	potassium voltage-gated channel subfamily H member 2	protein-coding	16	0.97	16.49484536	3.54E-11
chr7-1577	chr7	150859398	150860398	+	14.7	1000	"intron (NM_001098834, intron 1 of 1)"	AluSp|SINE|Alu	4737	NM_001098834	2636		NM_001098834	ENSG00000164900	GBX1	Huh-17	gastrulation brain homeobox 1	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr7-1578	chr7	150877914	150879301	+	21.1	1387	"intron (NM_001142459, intron 2 of 5)"	"intron (NM_001142459, intron 2 of 5)"	5871	NM_001142459	136371	Hs.647081	NM_080871	ENSG00000146926	ASB10	GLC1F	ankyrin repeat and SOCS box containing 10	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr7-1581	chr7	151337996	151338996	+	13.4	1000	"intron (NM_016203, intron 4 of 15)"	AluSx3|SINE|Alu	-8792	NM_001304531	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	13.44	2.43	5.530864198	2.99E-05
chr7-1582	chr7	151368317	151369317	+	15.4	1000	"intron (NM_016203, intron 4 of 15)"	"intron (NM_016203, intron 4 of 15)"	-39113	NM_001304531	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr7-1583	chr7	151440070	151441070	+	16	1000	"intron (NM_016203, intron 3 of 15)"	"intron (NM_016203, intron 3 of 15)"	-7170	NM_001304527	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr7-1584	chr7	151506142	151507396	+	16.6	1254	"intron (NM_016203, intron 1 of 15)"	"intron (NM_016203, intron 1 of 15)"	5188	NM_001040633	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr7-1589	chr7	151590157	151591157	+	15.4	1000	Intergenic	LTR16B1|LTR|ERVL	-16341	NM_016203	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr7-1593	chr7	152705528	152706528	+	15.4	1000	Intergenic	Intergenic	249194	NR_073000	57180	Hs.647117	NM_020445	ENSG00000133627	ACTR3B	ARP11|ARP3BETA	ARP3 actin related protein 3 homolog B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr7-1594	chr7	152804270	152805270	+	15.4	1000	Intergenic	Intergenic	304549	NR_125776	103724390	Hs.614280	NR_125776	ENSG00000234722	LINC01287	TCONS_l2_00027522	long intergenic non-protein coding RNA 1287	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr7-1595	chr7	153769770	153771288	+	18.6	1518	"intron (NM_130797, intron 1 of 25)"	"intron (NM_130797, intron 1 of 25)"	-12874	NR_136254	101929998	Hs.689473	NR_136254		LOC101929998	-	uncharacterized LOC101929998	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr7-1596	chr7	154115112	154116112	+	14.7	1000	"intron (NM_001936, intron 1 of 25)"	"intron (NM_001936, intron 1 of 25)"	113315	NM_001290252	1804	Hs.490684	NM_001936	ENSG00000130226	DPP6	DPL1|DPPX|MRD33|VF2	dipeptidyl peptidase like 6	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-1597	chr7	154215787	154216787	+	16	1000	"intron (NM_001936, intron 3 of 25)"	"intron (NM_001936, intron 3 of 25)"	213990	NM_001290252	1804	Hs.490684	NM_001936	ENSG00000130226	DPP6	DPL1|DPPX|MRD33|VF2	dipeptidyl peptidase like 6	protein-coding	16	2.91	5.498281787	4.98E-06
chr7-1598	chr7	154491220	154492220	+	14.7	1000	"intron (NM_001936, intron 7 of 25)"	MIR|SINE|MIR	-228507	NR_024477	100132707	Hs.586358	NR_024476	ENSG00000214106	PAXIP1-AS2	PAXIP1OS	PAXIP1 antisense RNA 2	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr7-16	chr7	73704272	73705528	+	35.2	1256	"intron (NM_003388, intron 1 of 16)"	"intron (NM_003388, intron 1 of 16)"	1095	NM_003388	7461	Hs.647018	NM_003388	ENSG00000106665	CLIP2	CLIP|CLIP-115|CYLN2|WBSCR3|WBSCR4|WSCR3|WSCR4	CAP-Gly domain containing linker protein 2	protein-coding	35.2	3.88	9.072164948	5.09E-17
chr7-1601	chr7	154663445	154664445	+	15.4	1000	"intron (NM_001936, intron 18 of 25)"	"intron (NM_001936, intron 18 of 25)"	-56282	NR_024477	100132707	Hs.586358	NR_024476	ENSG00000214106	PAXIP1-AS2	PAXIP1OS	PAXIP1 antisense RNA 2	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr7-1603	chr7	154898370	154901220	+	44.2	2850	Intergenic	Intergenic	-36528	NR_038945	100128264	Hs.248137	NR_038945	ENSG00000220575	HTR5A-AS1	HTR5AOS	HTR5A antisense RNA 1	ncRNA	44.17	8.25	5.353939394	2.15E-14
chr7-1605	chr7	154924485	154925485	+	15.4	1000	Intergenic	Intergenic	-61718	NR_038945	100128264	Hs.248137	NR_038945	ENSG00000220575	HTR5A-AS1	HTR5AOS	HTR5A antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr7-161	chr7	100695211	100698246	+	54.4	3035	"intron (NR_133665, intron 10 of 11)"	"intron (NR_133665, intron 10 of 11)"	-31992	NM_030961	81844	Hs.521092	NM_030961	ENSG00000169871	TRIM56	RNF109	tripartite motif containing 56	protein-coding	54.41	11.65	4.670386266	1.91E-15
chr7-1618	chr7	155286229	155287229	+	14.1	1000	Intergenic	Intergenic	35905	NM_001427	2020	Hs.134989	NM_001427	ENSG00000164778	EN2	-	engrailed homeobox 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr7-1619	chr7	155290987	155291987	+	16	1000	Intergenic	Intergenic	35052	NM_001103176	285888	Hs.146751	NM_001103176	ENSG00000146910	CNPY1	-	canopy FGF signaling regulator 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr7-1621	chr7	155308735	155312309	+	51.2	3574	"intron (NM_001103176, intron 1 of 3)"	MIRc|SINE|MIR	16017	NM_001103176	285888	Hs.146751	NM_001103176	ENSG00000146910	CNPY1	-	canopy FGF signaling regulator 1	protein-coding	51.21	6.31	8.115689382	5.17E-23
chr7-1626	chr7	155608099	155609099	+	15.4	1000	Intergenic	Intergenic	-3632	NM_000193	6469	Hs.164537	NM_000193	ENSG00000164690	SHH	HHG1|HLP3|HPE3|MCOPCB5|SMMCI|TPT|TPTPS	sonic hedgehog	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr7-1628	chr7	155641586	155645050	+	44.8	3464	Intergenic	Intergenic	-38351	NM_000193	6469	Hs.164537	NM_000193	ENSG00000164690	SHH	HHG1|HLP3|HPE3|MCOPCB5|SMMCI|TPT|TPTPS	sonic hedgehog	protein-coding	44.81	4.85	9.239175258	4.43E-22
chr7-163	chr7	128783630	128785454	+	39.7	1824	promoter-TSS (NM_178562)	promoter-TSS (NM_178562)	-170	NM_178562	340348	Hs.27267	NM_178562	ENSG00000158457	TSPAN33	PEN|PEN.|TSPAN-33	tetraspanin 33	protein-coding	39.69	8.74	4.541189931	1.21E-11
chr7-1630	chr7	155679417	155681068	+	23	1651	Intergenic	L1MB7|LINE|L1	-73671	NR_144629	389602	Hs.583071	NM_001291913		LOC389602	-	uncharacterized LOC389602	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr7-1633	chr7	155771667	155773765	+	33.9	2098	Intergenic	Intergenic	17390	NM_001291913	389602	Hs.583071	NM_001291913		LOC389602	-	uncharacterized LOC389602	protein-coding	33.92	3.88	8.742268041	4.55E-16
chr7-1635	chr7	155848743	155850238	+	23	1495	Intergenic	Intergenic	94164	NM_001291913	389602	Hs.583071	NM_001291913		LOC389602	-	uncharacterized LOC389602	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr7-1637	chr7	155937599	155938599	+	16	1000	Intergenic	L1MA7|LINE|L1	182773	NM_001291913	389602	Hs.583071	NM_001291913		LOC389602	-	uncharacterized LOC389602	protein-coding	16	2.43	6.58436214	7.90E-07
chr7-164	chr7	134386446	134387709	+	23.7	1263	Intergenic	Intergenic	55546	NM_001293085	669	Hs.198365	NM_001724	ENSG00000172331	BPGM	DPGM	bisphosphoglycerate mutase	protein-coding	23.68	2.43	9.744855967	2.61E-12
chr7-1640	chr7	156012162	156013162	+	16	1000	Intergenic	Intergenic	225620	NR_038232	285889	Hs.407095	NR_038232	ENSG00000233878	LOC285889	-	uncharacterized LOC285889	ncRNA	16	3.88	4.12371134	7.91E-05
chr7-1644	chr7	156790449	156791449	+	16	1000	Intergenic	Tigger1|DNA|TcMar-Tigger	11180	NM_001165255	3110	Hs.37035	NM_005515	ENSG00000130675	MNX1	HB9|HLXB9|HOXHB9|SCRA1	motor neuron and pancreas homeobox 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr7-1648	chr7	156860872	156862344	+	23	1472	Intergenic	AluSx1|SINE|Alu	58057	NR_038835	645249	Hs.224879	NR_038835	ENSG00000243479	MNX1-AS1	CCAT5	MNX1 antisense RNA 1 (head to head)	ncRNA	23.04	2.43	9.481481481	2.61E-12
chr7-1652	chr7	157634743	157637871	+	52.5	3128	"intron (NM_130843, intron 11 of 21)"	"intron (NM_130843, intron 11 of 21)"	-10970	NR_038966	100506585	Hs.661265	NR_038966	ENSG00000233038	LOC100506585	-	uncharacterized LOC100506585	ncRNA	52.49	10.19	5.151128557	1.12E-16
chr7-1653	chr7	157821336	157822336	+	16	1000	"intron (NM_130843, intron 10 of 21)"	"intron (NM_130843, intron 10 of 21)"	174559	NR_038966	100506585	Hs.661265	NR_038966	ENSG00000233038	LOC100506585	-	uncharacterized LOC100506585	ncRNA	16	1.46	10.95890411	3.44E-09
chr7-1656	chr7	158221876	158222876	+	14.1	1000	"intron (NM_130842, intron 1 of 21)"	"intron (NM_130842, intron 1 of 21)"	103129	NR_030325	693180		NR_030325	ENSG00000207637	MIR595	MIRN595|hsa-mir-595	microRNA 595	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr7-1657	chr7	158899279	158900279	+	16	1000	"intron (NR_130758, intron 3 of 12)"	"intron (NR_130758, intron 3 of 12)"	-9884	NM_001308259	7434	Hs.585052	NM_003382	ENSG00000106018	VIPR2	C16DUPq36.3|DUP7q36.3|PACAP-R-3|PACAP-R3|VIP-R-2|VPAC2|VPAC2R|VPCAP2R	vasoactive intestinal peptide receptor 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr7-166	chr7	150849046	150851379	+	37.8	2333	"intron (NM_001098834, intron 1 of 1)"	"intron (NM_001098834, intron 1 of 1)"	14423	NM_001098834	2636		NM_001098834	ENSG00000164900	GBX1	Huh-17	gastrulation brain homeobox 1	protein-coding	37.76	6.31	5.984152139	1.20E-13
chr7-1660	chr7	94599	95599	+	14.1	1000	Intergenic	L1M3c|LINE|L1	54339	NR_134325	102723672	Hs.605204	NR_134325		LOC102723672	-	uncharacterized LOC102723672	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr7-1663	chr7	155781	157137	+	18.6	1356	TTS (NR_108065)	TTS (NR_108065)	6741	NR_108064	100507642	Hs.557780	NR_108064		LOC100507642	-	uncharacterized LOC100507642	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr7-1668	chr7	293142	294696	+	22.4	1554	"intron (NM_020223, intron 5 of 9)"	CpG	-36217	NM_001195127	100288524	Hs.702860	NM_001195127		WI2-2373I1.2	-	forkhead box L1-like	ncRNA	22.4	4.37	5.125858124	1.32E-07
chr7-1674	chr7	444727	445727	+	14.7	1000	Intergenic	L1ME3A|LINE|L1	25836	NR_033960	442497	Hs.704269	NR_033960	ENSG00000249574	LOC442497	-	uncharacterized LOC442497	ncRNA	14.72	0	15.16333034	3.99E-13
chr7-1680	chr7	1259402	1261374	+	29.4	1972	Intergenic	AluSg|SINE|Alu	-12266	NM_001080461	340260	Hs.232272	NM_001080461	ENSG00000164853	UNCX	UNCX4.1	UNC homeobox	protein-coding	29.44	3.88	7.587628866	2.58E-13
chr7-1682	chr7	1265454	1266454	+	14.1	1000	Intergenic	Intergenic	-6700	NM_001080461	340260	Hs.232272	NM_001080461	ENSG00000164853	UNCX	UNCX4.1	UNC homeobox	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr7-1685	chr7	1302087	1304922	+	40.3	2835	Intergenic	Intergenic	30850	NM_001080461	340260	Hs.232272	NM_001080461	ENSG00000164853	UNCX	UNCX4.1	UNC homeobox	protein-coding	40.33	7.77	5.19047619	6.49E-13
chr7-1686	chr7	1307508	1309287	+	26.9	1779	Intergenic	Intergenic	35743	NM_001080461	340260	Hs.232272	NM_001080461	ENSG00000164853	UNCX	UNCX4.1	UNC homeobox	protein-coding	26.88	2.91	9.237113402	7.03E-14
chr7-1689	chr7	1405910	1406910	+	14.7	1000	Intergenic	MIR|SINE|MIR	92699	NM_182924	79778	Hs.376617	NM_024723	ENSG00000164877	MICALL2	JRAB|MICAL-L2	MICAL like 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-1697	chr7	2536870	2537870	+	14.7	1000	Intergenic	Intergenic	-14793	NM_001166355	3955	Hs.159142	NM_002304	ENSG00000106003	LFNG	SCDO3	LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr7-1698	chr7	2719281	2720281	+	14.7	1000	"intron (NM_133463, intron 1 of 6)"	"intron (NM_133463, intron 1 of 6)"	625	NM_133463	155185	Hs.42221	NM_133463	ENSG00000174945	AMZ1	-	archaelysin family metallopeptidase 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr7-1699	chr7	3256439	3257439	+	14.7	1000	Intergenic	Intergenic	-58733	NR_126024	100129603	Hs.652997	NR_126024		LOC100129603	-	uncharacterized LOC100129603	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr7-1703	chr7	3419110	3420110	+	14.7	1000	"intron (NM_152744, intron 1 of 44)"	Tigger4a|DNA|TcMar-Tigger	78530	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr7-1705	chr7	4196493	4197493	+	14.7	1000	"intron (NM_152744, intron 30 of 44)"	HAL1-3A_ME|LINE|L1	27676	NM_001079653	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr7-1707	chr7	4553763	4554763	+	15.4	1000	Intergenic	Intergenic	-167667	NM_001037165	221937	Hs.487393	NM_001037165	ENSG00000164916	FOXK1	FOXK1L	forkhead box K1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr7-1714	chr7	17171487	17172487	+	15.4	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	-166289	NM_001621	196	Hs.171189	NM_001621	ENSG00000106546	AHR	bHLHe76	aryl hydrocarbon receptor	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr7-1721	chr7	22606323	22607323	+	15.4	1000	"intron (NR_038393, intron 2 of 3)"	L1MA4|LINE|L1	3867	NR_038393	100506178	Hs.668122	NR_038393	ENSG00000232759	LOC100506178	-	uncharacterized LOC100506178	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr7-1726	chr7	24412660	24413660	+	14.7	1000	Intergenic	MLT1G3|LTR|ERVL-MaLR	89353	NM_000905	4852	Hs.1832	NM_000905	ENSG00000122585	NPY	PYY4	neuropeptide Y	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr7-1728	chr7	24487411	24488411	+	14.7	1000	Intergenic	MIRb|SINE|MIR	-125054	NM_001303037	51678	Hs.533355	NM_016447	ENSG00000105926	MPP6	PALS2|VAM-1|VAM1|p55T	membrane palmitoylated protein 6	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-1734	chr7	25440367	25441367	+	14.7	1000	Intergenic	Intergenic	-172762	NM_022150	64111	Hs.60473	NM_022150	ENSG00000105954	NPVF	C7orf9|RFRP	neuropeptide VF precursor	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr7-1742	chr7	25930795	25931795	+	14.7	1000	Intergenic	Intergenic	58311	NR_029597	406940		NR_029597	ENSG00000199085	MIR148A	MIRN148|MIRN148A|hsa-mir-148|mir-148a	microRNA 148a	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr7-1745	chr7	26454478	26455478	+	14.1	1000	"intron (NR_015364, intron 1 of 4)"	AluJr|SINE|Alu	11870	NR_015364	441204	Hs.587432	NR_015364		LOC441204	-	uncharacterized LOC441204	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr7-1747	chr7	26685772	26686772	+	15.4	1000	"3' UTR (NM_001145531, exon 4 of 4)"	"3' UTR (NM_001145531, exon 4 of 4)"	7568	NM_001302625	285941	Hs.413394	NM_001145531		C7orf71	-	chromosome 7 open reading frame 71	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr7-1748	chr7	26691855	26692855	+	15.4	1000	Intergenic	Intergenic	13651	NM_001302625	285941	Hs.413394	NM_001145531		C7orf71	-	chromosome 7 open reading frame 71	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr7-1750	chr7	26697074	26698074	+	13.4	1000	Intergenic	Intergenic	18870	NM_001302625	285941	Hs.413394	NM_001145531		C7orf71	-	chromosome 7 open reading frame 71	protein-coding	13.44	2.43	5.530864198	2.99E-05
chr7-1752	chr7	27128567	27129567	+	15.4	1000	Intergenic	Intergenic	6558	NM_005522	3198	Hs.67397	NM_005522	ENSG00000105991	HOXA1	BSAS|HOX1|HOX1F	homeobox A1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr7-1753	chr7	27191520	27192814	+	24.3	1294	"non-coding (NR_038832, exon 3 of 3)"	"non-coding (NR_038832, exon 3 of 3)"	4129	NM_006896	3204	Hs.610216	NM_006896	ENSG00000122592	HOXA7	ANTP|HOX1|HOX1.1|HOX1A	homeobox A7	protein-coding	24.32	0.97	25.07216495	2.01E-20
chr7-1754	chr7	27201286	27202286	+	15.4	1000	TTS (NM_152739)	TTS (NM_152739)	3363	NM_152739	3205	Hs.659350	NM_152739	ENSG00000078399	HOXA9	ABD-B|HOX1|HOX1.7|HOX1G	homeobox A9	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr7-1758	chr7	27220287	27227881	+	125.5	7594	promoter-TSS (NR_002795)	promoter-TSS (NR_002795)	751	NM_005523	3207	Hs.249171	NM_005523	ENSG00000005073	HOXA11	HOX1|HOX1I|RUSAT1	homeobox A11	protein-coding	125.46	18.44	6.803687636	2.40E-47
chr7-1761	chr7	27229839	27233715	+	60.2	3876	Intergenic	Intergenic	6750	NR_002795	221883	Hs.587427	NR_002795	ENSG00000240990	HOXA11-AS	HOXA-AS5|HOXA11-AS1|HOXA11AS|HOXA11S|NCRNA00076	HOXA11 antisense RNA	ncRNA	60.17	5.82	10.33848797	3.81E-31
chr7-1762	chr7	27243484	27244484	+	14.7	1000	"intron (NR_037843, intron 2 of 2)"	"intron (NR_037843, intron 2 of 2)"	3944	NR_037843	100316868	Hs.199486	NR_037843		HOTTIP	HOXA-AS6|HOXA13-AS1|NCRNA00213	HOXA distal transcript antisense RNA	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr7-1763	chr7	27252397	27253397	+	15.4	1000	Intergenic	CpG	12857	NR_037843	100316868	Hs.199486	NR_037843		HOTTIP	HOXA-AS6|HOXA13-AS1|NCRNA00213	HOXA distal transcript antisense RNA	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr7-1764	chr7	27323331	27324331	+	13.4	1000	Intergenic	Intergenic	-36983	NR_120507	101410536	Hs.687800	NR_120507	ENSG00000253405	EVX1-AS	EVX1-AS1	EVX1 antisense RNA	ncRNA	13.44	0.49	27.42857143	1.16E-11
chr7-1765	chr7	27353095	27354665	+	22.4	1570	Intergenic	Intergenic	-67032	NR_120507	101410536	Hs.687800	NR_120507	ENSG00000253405	EVX1-AS	EVX1-AS1	EVX1 antisense RNA	ncRNA	22.4	4.37	5.125858124	1.32E-07
chr7-1767	chr7	27516351	27517351	+	14.7	1000	Intergenic	MLT1H1|LTR|ERVL-MaLR	-138742	NR_122122	790953	Hs.571330	NR_122122		TSL	-	"testis-expressed, seven-twelve, leukemia"	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr7-177	chr7	155903708	155904961	+	25	1253	Intergenic	Tigger1|DNA|TcMar-Tigger	149008	NM_001291913	389602	Hs.583071	NM_001291913		LOC389602	-	uncharacterized LOC389602	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr7-1771	chr7	28562344	28563344	+	15.4	1000	"intron (NM_182899, intron 3 of 9)"	"intron (NM_182899, intron 3 of 9)"	87610	NM_004904	9586	Hs.437075	NM_004904	ENSG00000146592	CREB5	CRE-BPA|CREB-5	cAMP responsive element binding protein 5	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr7-1773	chr7	29330141	29331141	+	14.1	1000	"intron (NM_001293072, intron 1 of 12)"	MER50|LTR|ERV1	-82055	NR_120522	102724484	Hs.638665	NR_120522		LOC102724484	-	uncharacterized LOC102724484	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr7-1779	chr7	30722172	30723172	+	14.7	1000	promoter-TSS (NM_001202482)	promoter-TSS (NM_001202482)	-531	NM_001202483	1395	Hs.546246	NM_001883	ENSG00000106113	CRHR2	CRF-RB|CRF2|CRFR2|HM-CRF	corticotropin releasing hormone receptor 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-178	chr7	1248586	1254387	+	87.7	5801	Intergenic	Intergenic	-21168	NM_001080461	340260	Hs.232272	NM_001080461	ENSG00000164853	UNCX	UNCX4.1	UNC homeobox	protein-coding	87.69	12.62	6.948494453	9.31E-34
chr7-1780	chr7	30736217	30737217	+	14.1	1000	"intron (NM_001202481, intron 1 of 13)"	"intron (NM_001202481, intron 1 of 13)"	3002	NM_001202475	1395	Hs.546246	NM_001883	ENSG00000106113	CRHR2	CRF-RB|CRF2|CRFR2|HM-CRF	corticotropin releasing hormone receptor 2	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr7-1785	chr7	31280578	31281578	+	14.7	1000	Intergenic	Intergenic	99460	NM_022728	63974	Hs.45152	NM_022728	ENSG00000164600	NEUROD6	Atoh2|MATH2|Math-2|NEX1M|Nex1|bHLHa2	neuronal differentiation 6	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr7-1788	chr7	32473584	32474584	+	15.4	1000	Intergenic	AluSg|SINE|Alu	-6248	NM_001322059	5137	Hs.143821	NM_005020	ENSG00000154678	PDE1C	Hcam3|cam-PDE 1C|hCam-3	phosphodiesterase 1C	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr7-1790	chr7	33153725	33154725	+	14.7	1000	Intergenic	Intergenic	-5223	NM_203288	6100	Hs.326805	NM_203288	ENSG00000164610	RP9	PAP-1|PAP1	retinitis pigmentosa 9 (autosomal dominant)	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-1791	chr7	33828838	33829838	+	14.1	1000	Intergenic	Intergenic	-115185	NM_133468	168667	Hs.660998	NM_133468	ENSG00000164619	BMPER	CRIM3|CV-2|CV2	BMP binding endothelial regulator	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr7-1794	chr7	35295059	35296059	+	13.4	1000	Intergenic	Intergenic	-1848	NM_001077653	57057	Hs.404167	NM_020417	ENSG00000164532	TBX20	ASD4	T-box 20	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr7-1798	chr7	36094319	36095829	+	24.3	1510	Intergenic	Intergenic	-39846	NR_108089	101928618	Hs.561704	NR_108089	ENSG00000261184	LOC101928618	-	uncharacterized LOC101928618	ncRNA	24.32	4.85	5.01443299	2.27E-08
chr7-1803	chr7	37955342	37956342	+	14.7	1000	"exon (NM_003014, exon 1 of 6)"	"exon (NM_003014, exon 1 of 6)"	683	NM_003014	6424	Hs.658169	NM_003014	ENSG00000106483	SFRP4	FRP-4|FRPHE|PYL|sFRP-4	secreted frizzled related protein 4	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-1825	chr7	43885460	43886460	+	14.1	1000	Intergenic	Intergenic	23185	NM_032014	64951	Hs.284286	NM_032014	ENSG00000062582	MRPS24	HSPC335|MRP-S24|S24mt|bMRP-47|bMRP47	mitochondrial ribosomal protein S24	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr7-1826	chr7	44275539	44278486	+	39.7	2947	"intron (NM_172079, intron 12 of 19)"	"intron (NM_172079, intron 12 of 19)"	36434	NM_006555	10652	Hs.520794	NM_006555	ENSG00000106636	YKT6	-	YKT6 v-SNARE homolog (S. cerevisiae)	protein-coding	39.69	5.82	6.819587629	3.74E-16
chr7-1829	chr7	44327215	44330539	+	41.6	3324	"intron (NM_172079, intron 1 of 19)"	"intron (NM_172079, intron 1 of 19)"	36353	NM_172079	816	Hs.351887	NM_001220	ENSG00000058404	CAMK2B	CAM2|CAMK2|CAMKB	calcium/calmodulin dependent protein kinase II beta	protein-coding	41.61	4.37	9.52173913	1.60E-20
chr7-183	chr7	44202584	44203843	+	21.8	1259	"intron (NM_000162, intron 1 of 9)"	L1M4c|LINE|L1	-4326	NM_033508	2645	Hs.1270	NM_000162	ENSG00000106633	GCK	FGQTL3|GK|GLK|HHF3|HK4|HKIV|HXKP|LGLK|MODY2	glucokinase	protein-coding	21.76	4.37	4.979405034	1.32E-07
chr7-1832	chr7	44336595	44337595	+	14.1	1000	"intron (NM_172079, intron 1 of 19)"	L1MB4|LINE|L1	28135	NM_172079	816	Hs.351887	NM_001220	ENSG00000058404	CAMK2B	CAM2|CAMK2|CAMKB	calcium/calmodulin dependent protein kinase II beta	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr7-1837	chr7	45223724	45227425	+	48	3701	Intergenic	Intergenic	28207	NM_005856	10268	Hs.25691	NM_005856	ENSG00000122679	RAMP3	-	receptor activity modifying protein 3	protein-coding	48.01	6.8	7.060294118	2.78E-19
chr7-1839	chr7	45277817	45279557	+	26.9	1740	Intergenic	PABL_B|LTR|ERV1	81320	NM_005856	10268	Hs.25691	NM_005856	ENSG00000122679	RAMP3	-	receptor activity modifying protein 3	protein-coding	26.88	5.34	5.033707865	3.94E-09
chr7-1840	chr7	45424728	45425728	+	12.8	1000	Intergenic	Intergenic	-188511	NM_001281768	107	Hs.192215	NM_021116	ENSG00000164742	ADCY1	AC1|DFNB44	adenylate cyclase 1	protein-coding	12.8	0.49	26.12244898	1.16E-11
chr7-1842	chr7	45716666	45717666	+	14.1	1000	"intron (NM_021116, intron 8 of 19)"	"intron (NM_021116, intron 8 of 19)"	91451	NR_024271	641977	Hs.723477	NR_024271	ENSG00000214765	SEPT7P2	SEPT13|SEPT7B	septin 7 pseudogene 2	pseudo	14.08	1.94	7.257731959	6.14E-07
chr7-1847	chr7	50042557	50043557	+	15.4	1000	"intron (NM_007009, intron 6 of 7)"	L1M3de|LINE|L1	89803	NM_001159878	11055	Hs.388841	NM_007009	ENSG00000042813	ZPBP	ZPBP1	zona pellucida binding protein	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr7-1848	chr7	50125240	50126240	+	14.7	1000	"intron (NM_007009, intron 2 of 7)"	L1MB7|LINE|L1	7120	NM_001159878	11055	Hs.388841	NM_007009	ENSG00000042813	ZPBP	ZPBP1	zona pellucida binding protein	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr7-1849	chr7	50861513	50862513	+	15.4	1000	promoter-TSS (NM_001001555)	promoter-TSS (NM_001001555)	-854	NM_001001555	2887	Hs.164060	NM_005311	ENSG00000106070	GRB10	GRB-IR|Grb-10|IRBP|MEG1|RSS	growth factor receptor bound protein 10	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr7-185	chr7	73437954	73443155	+	78.1	5201	Intergenic	MamRep1879|DNA|hAT?	-1565	NM_001278914	2006	Hs.647061	NM_000501	ENSG00000049540	ELN	SVAS|WBS|WS	elastin	protein-coding	78.09	15.05	5.188704319	3.65E-24
chr7-1854	chr7	51025654	51026654	+	14.7	1000	Intergenic	Intergenic	-164995	NM_001001555	2887	Hs.164060	NM_005311	ENSG00000106070	GRB10	GRB-IR|Grb-10|IRBP|MEG1|RSS	growth factor receptor bound protein 10	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-1856	chr7	51081630	51082630	+	15.4	1000	Intergenic	Intergenic	-220971	NM_001001555	2887	Hs.164060	NM_005311	ENSG00000106070	GRB10	GRB-IR|Grb-10|IRBP|MEG1|RSS	growth factor receptor bound protein 10	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr7-186	chr7	75268842	75270230	+	26.9	1388	"intron (NM_005338, intron 1 of 30)"	MIR3|SINE|MIR	98754	NM_005338	3092	Hs.329266	NM_005338	ENSG00000127946	HIP1	HIP-I|ILWEQ|SHON|SHONbeta|SHONgamma	huntingtin interacting protein 1	protein-coding	26.88	3.4	7.905882353	1.25E-12
chr7-1861	chr7	55054013	55055013	+	15.4	1000	Intergenic	L1MD1|LINE|L1	-32201	NM_001346898	1956	Hs.488293	NM_005228	ENSG00000146648	EGFR	ERBB|ERBB1|HER1|NISBD2|PIG61|mENA	epidermal growth factor receptor	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr7-1863	chr7	55300654	55301654	+	14.1	1000	Intergenic	Intergenic	22174	NR_110426	102725541	Hs.590524	NR_110426		ELDR	Fabl|LINC01156	EGFR long non-coding downstream RNA	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr7-1864	chr7	55334076	55335076	+	14.7	1000	Intergenic	Intergenic	-11248	NR_110426	102725541	Hs.590524	NR_110426		ELDR	Fabl|LINC01156	EGFR long non-coding downstream RNA	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr7-1865	chr7	55352012	55353310	+	21.1	1298	Intergenic	AluSx|SINE|Alu	-29333	NR_110426	102725541	Hs.590524	NR_110426		ELDR	Fabl|LINC01156	EGFR long non-coding downstream RNA	ncRNA	21.12	4.37	4.832951945	6.64E-07
chr7-1866	chr7	55638342	55640817	+	41	2475	promoter-TSS (NM_001321250)	promoter-TSS (NM_001321250)	-18	NM_001321250	81552	Hs.488307	NM_030796	ENSG00000154978	VOPP1	ECOP|GASP	"vesicular, overexpressed in cancer, prosurvival protein 1"	protein-coding	40.97	2.91	14.0790378	1.11E-25
chr7-1868	chr7	65775787	65776787	+	14.1	1000	"intron (NM_003596, intron 3 of 5)"	AluJo|SINE|Alu	89108	NR_026873	285908	Hs.50755	NM_181722	ENSG00000179406	LINC00174	NCRNA00174	long intergenic non-protein coding RNA 174	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr7-1874	chr7	73310524	73311524	+	14.1	1000	Intergenic	Intergenic	35535	NM_182504	135886	Hs.647026	NM_182504	ENSG00000175877	WBSCR28	-	Williams-Beuren syndrome chromosome region 28	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr7-1876	chr7	73471756	73473479	+	25.6	1723	"intron (NM_001278939, intron 23 of 33)"	CT-rich|Low_complexity|Low_complexity	-25490	NM_002314	3984	Hs.647035	NM_002314	ENSG00000106683	LIMK1	LIMK|LIMK-1	LIM domain kinase 1	protein-coding	25.6	1.94	13.19587629	4.03E-16
chr7-1879	chr7	75900448	75901448	+	14.1	1000	"intron (NM_001291831, intron 11 of 16)"	AluJo|SINE|Alu	-30927	NM_001540	3315	Hs.520973	NM_001540	ENSG00000106211	HSPB1	CMT2F|HEL-S-102|HMN2B|HS.76067|HSP27|HSP28|Hsp25|SRP27	heat shock protein family B (small) member 1	protein-coding	14.08	0	14.5040551	3.99E-13
chr7-1880	chr7	76004513	76005513	+	14.1	1000	Intergenic	AluJb|SINE|Alu	-16671	NM_012479	7532	Hs.744840	NM_012479	ENSG00000170027	YWHAG	14-3-3GAMMA|PPP1R170	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma	protein-coding	14.08	0.49	28.73469388	3.99E-13
chr7-1881	chr7	76007632	76008632	+	14.7	1000	Intergenic	AluSc8|SINE|Alu	-18709	NM_007155	7784	Hs.656137	NM_007155	ENSG00000188372	ZP3	ZP3A|ZP3B|ZPC|Zp-3	zona pellucida glycoprotein 3	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr7-1882	chr7	77669796	77670796	+	14.7	1000	"intron (NM_001301128, intron 20 of 20)"	"intron (NM_001301128, intron 20 of 20)"	200849	NM_001127357	57157	Hs.203965	NM_020432	ENSG00000006576	PHTF2	-	putative homeodomain transcription factor 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-1885	chr7	77785855	77786855	+	14.7	1000	"intron (NM_001301128, intron 15 of 20)"	"intron (NM_001301128, intron 15 of 20)"	-190204	NR_003680	399670	Hs.568045	NR_003680	ENSG00000231322	RPL13AP17	RPL13A_6_816	ribosomal protein L13a pseudogene 17	pseudo	14.72	2.91	5.058419244	2.67E-05
chr7-1887	chr7	79762153	79764298	+	33.3	2145	promoter-TSS (NM_002069)	promoter-TSS (NM_002069)	-915	NM_002069	2770	Hs.134587	NM_002069	ENSG00000127955	GNAI1	Gi	G protein subunit alpha i1	protein-coding	33.28	4.85	6.86185567	7.28E-14
chr7-1891	chr7	92795259	92796259	+	14.7	1000	Intergenic	LTR56|LTR|ERV1	-18058	NM_001303496	219285	Hs.489118	NM_152703	ENSG00000177409	SAMD9L	ATXPC|C7orf6|DRIF2|UEF1	sterile alpha motif domain containing 9 like	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr7-1892	chr7	93550787	93551787	+	14.7	1000	"5' UTR (NM_004126, exon 1 of 2)"	"5' UTR (NM_004126, exon 1 of 2)"	271	NM_004126	2791	Hs.83381	NM_004126	ENSG00000127920	GNG11	GNGT11	G protein subunit gamma 11	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-1896	chr7	95539137	95540137	+	15.4	1000	"intron (NM_001278422, intron 5 of 15)"	L2|LINE|L2	137819	NM_001135556	1780	Hs.440364	NM_004411	ENSG00000158560	DYNC1I1	DNCI1|DNCIC1	dynein cytoplasmic 1 intermediate chain 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr7-1897	chr7	95617495	95618495	+	15.4	1000	"intron (NM_001278422, intron 8 of 15)"	"intron (NM_001278422, intron 8 of 15)"	216177	NM_001135556	1780	Hs.440364	NM_004411	ENSG00000158560	DYNC1I1	DNCI1|DNCIC1	dynein cytoplasmic 1 intermediate chain 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr7-190	chr7	120421174	120422431	+	23	1257	Intergenic	HERVH-int|LTR|ERV1	76375	NM_012338	23554	Hs.16529	NM_012338	ENSG00000106025	TSPAN12	EVR5|NET-2|NET2|TM4SF12	tetraspanin 12	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr7-1902	chr7	96654276	96657110	+	42.2	2834	Intergenic	Intergenic	-1550	NM_005221	1749	Hs.99348	NM_005221	ENSG00000105880	DLX5	SHFM1D	distal-less homeobox 5	protein-coding	42.25	4.85	8.711340206	3.69E-20
chr7-1904	chr7	96900158	96901449	+	23	1291	Intergenic	Intergenic	154898	NM_020186	57001	Hs.592269	NM_020186	ENSG00000196636	SDHAF3	ACN9|DC11|LYRM10|Sdh7	succinate dehydrogenase complex assembly factor 3	protein-coding	23.04	4.37	5.272311213	2.46E-08
chr7-1905	chr7	97020106	97021106	+	13.4	1000	Intergenic	LOR1b|LTR|ERV1	274701	NM_020186	57001	Hs.592269	NM_020186	ENSG00000196636	SDHAF3	ACN9|DC11|LYRM10|Sdh7	succinate dehydrogenase complex assembly factor 3	protein-coding	13.44	2.43	5.530864198	2.99E-05
chr7-1907	chr7	100352561	100354031	+	21.8	1470	"intron (NM_003386, intron 15 of 48)"	AluJb|SINE|Alu	22047	NR_111917	7455	Hs.307004	NM_003386	ENSG00000146839	ZAN	-	zonadhesin (gene/pseudogene)	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr7-1914	chr7	100749258	100750258	+	14.7	1000	Intergenic	Intergenic	-20612	NM_000602	5054	Hs.414795	NM_000602	ENSG00000106366	SERPINE1	PAI|PAI-1|PAI1|PLANH1	serpin family E member 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-1915	chr7	100902780	100903780	+	15.4	1000	Intergenic	AluSx1|SINE|Alu	-14909	NM_016068	51024	Hs.423968	NM_016068	ENSG00000214253	FIS1	CGI-135|TTC11	"fission, mitochondrial 1"	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr7-1916	chr7	100937614	100938938	+	21.1	1324	Intergenic	AluSg4|SINE|Alu	-13312	NR_110115	101927746	Hs.698373	NR_110115		LOC101927746	-	uncharacterized LOC101927746	ncRNA	21.12	1.94	10.88659794	9.02E-12
chr7-1920	chr7	101416277	101418089	+	25	1812	Intergenic	Intergenic	-42001	NM_001913	1523	Hs.191482	NM_001913	ENSG00000257923	CUX1	CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GOLIM6|Nbla10317|p100|p110|p200|p75	cut like homeobox 1	protein-coding	24.96	4.37	5.711670481	4.38E-09
chr7-1922	chr7	103102838	103103838	+	14.1	1000	"intron (NR_110141, intron 2 of 3)"	L1P3|LINE|L1	-16714	NM_206885	375611	Hs.585146	NM_198999	ENSG00000170615	SLC26A5	DFNB61|PRES	solute carrier family 26 member 5	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr7-1923	chr7	103350556	103351556	+	15.4	1000	"intron (NM_173054, intron 8 of 63)"	Arthur1|DNA|hAT-Tip100	-264432	NM_206885	375611	Hs.585146	NM_198999	ENSG00000170615	SLC26A5	DFNB61|PRES	solute carrier family 26 member 5	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr7-1925	chr7	104476859	104477859	+	14.7	1000	"intron (NM_199000, intron 2 of 2)"	"intron (NM_199000, intron 2 of 2)"	-32820	NR_034142	645591	Hs.658835	NR_034141	ENSG00000226869	LHFPL3-AS1	-	LHFPL3 antisense RNA 1	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr7-1928	chr7	105442813	105443813	+	14.7	1000	"intron (NM_020725, intron 2 of 11)"	"intron (NM_020725, intron 2 of 11)"	73718	NM_020725	222255	Hs.745056	NM_020725	ENSG00000146776	ATXN7L1	ATXN7L4	ataxin 7 like 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-1933	chr7	105645727	105646727	+	15.4	1000	"intron (NM_152750, intron 8 of 18)"	"intron (NM_152750, intron 8 of 18)"	42570	NM_001301161	222256	Hs.150120	NM_152750	ENSG00000128536	CDHR3	CDH28	cadherin related family member 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr7-1939	chr7	105670253	105672431	+	30.7	2178	"intron (NM_152750, intron 18 of 18)"	"intron (NM_152750, intron 18 of 18)"	67685	NM_001301161	222256	Hs.150120	NM_152750	ENSG00000128536	CDHR3	CDH28	cadherin related family member 3	protein-coding	30.72	3.88	7.917525773	3.25E-14
chr7-194	chr7	148342494	148343494	+	21.1	1000	Intergenic	MLT2B3|LTR|ERVL	-52939	NM_003592	8454	Hs.146806	NM_003592	ENSG00000055130	CUL1	-	cullin 1	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr7-195	chr7	150498533	150499964	+	27.5	1431	promoter-TSS (NM_014020)	promoter-TSS (NM_014020)	-800	NM_014020	28959	Hs.647090	NM_014020	ENSG00000106565	TMEM176B	LR8|MS4B2	transmembrane protein 176B	protein-coding	27.52	4.37	6.297482838	1.19E-10
chr7-1954	chr7	116234812	116236184	+	19.2	1372	"intron (NR_120506, intron 2 of 4)"	L3|LINE|CR1	19376	NR_120506	100996266	Hs.552122	NR_120506		LINC01510	-	long intergenic non-protein coding RNA 1510	ncRNA	19.2	4.37	4.393592677	3.16E-06
chr7-1956	chr7	116274610	116275610	+	14.7	1000	Intergenic	Intergenic	-20236	NR_120506	100996266	Hs.552122	NR_120506		LINC01510	-	long intergenic non-protein coding RNA 1510	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr7-1957	chr7	116339035	116340035	+	14.7	1000	"exon (NM_001324401, exon 2 of 12)"	"exon (NM_001324401, exon 2 of 12)"	27091	NM_001324401	4233	Hs.132966	NM_000245	ENSG00000105976	MET	AUTS9|DFNB97|HGFR|RCCP2|c-Met	"MET proto-oncogene, receptor tyrosine kinase"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-1958	chr7	116431070	116432070	+	15.4	1000	"intron (NM_001127500, intron 19 of 20)"	L1ME1|LINE|L1	-70993	NM_006136	830	Hs.446123	NM_006136	ENSG00000198898	CAPZA2	CAPPA2|CAPZ	capping actin protein of muscle Z-line alpha subunit 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr7-1963	chr7	120496345	120499262	+	40.3	2917	"intron (NM_012338, intron 1 of 7)"	CpG	374	NM_012338	23554	Hs.16529	NM_012338	ENSG00000106025	TSPAN12	EVR5|NET-2|NET2|TM4SF12	tetraspanin 12	protein-coding	40.33	3.4	11.86176471	1.29E-22
chr7-1965	chr7	120754715	120755715	+	14.1	1000	"intron (NM_024913, intron 7 of 22)"	"intron (NM_024913, intron 7 of 22)"	125770	NM_001105533	79974	Hs.189652	NM_024913	ENSG00000106034	CPED1	C7orf58	cadherin like and PC-esterase domain containing 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr7-1971	chr7	124304801	124305801	+	14.7	1000	Intergenic	Intergenic	100778	NM_005302	2861	Hs.406094	NM_005302	ENSG00000170775	GPR37	EDNRBL|PAELR|hET(B)R-LP	G protein-coupled receptor 37	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-1972	chr7	124403882	124404882	+	15.4	1000	"exon (NM_005302, exon 1 of 2)"	"exon (NM_005302, exon 1 of 2)"	1697	NM_005302	2861	Hs.406094	NM_005302	ENSG00000170775	GPR37	EDNRBL|PAELR|hET(B)R-LP	G protein-coupled receptor 37	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr7-1977	chr7	127756486	127760487	+	49.9	4001	Intergenic	Intergenic	36573	NR_030324	693178		NR_030324	ENSG00000207588	MIR593	MIRN593|hsa-mir-593	microRNA 593	ncRNA	49.93	12.13	4.116240725	6.08E-13
chr7-1979	chr7	127776216	127777216	+	13.4	1000	Intergenic	Intergenic	54803	NR_030324	693178		NR_030324	ENSG00000207588	MIR593	MIRN593|hsa-mir-593	microRNA 593	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr7-1980	chr7	127837672	127838672	+	15.4	1000	Intergenic	Intergenic	-9753	NR_029596	406917		NR_029596	ENSG00000207705	MIR129-1	MIR-129b|MIRN129-1|mir-129-1	microRNA 129-1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr7-1982	chr7	128004650	128005650	+	14.1	1000	Intergenic	HAL1|LINE|L1	-3411	NM_001114726	401399	Hs.381096	NM_001114726	ENSG00000224940	PRRT4	-	proline rich transmembrane protein 4	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr7-1986	chr7	128576932	128579030	+	39.7	2098	promoter-TSS (NM_032643)	promoter-TSS (NM_032643)	-10	NM_001242452	3663	Hs.521181	NM_032643	ENSG00000128604	IRF5	SLEB10	interferon regulatory factor 5	protein-coding	39.69	4.37	9.082379863	1.50E-19
chr7-1991	chr7	131290241	131291507	+	21.1	1266	Intergenic	Intergenic	-49498	NM_001018111	5420	Hs.744213	NM_005397	ENSG00000128567	PODXL	Gp200|PC|PCLP|PCLP-1	podocalyxin like	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr7-1995	chr7	131513896	131514896	+	15.4	1000	Intergenic	Intergenic	-80583	NR_110836	101928782	Hs.571369	NR_110836	ENSG00000224865	LOC101928782	-	uncharacterized LOC101928782	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr7-1996	chr7	131576313	131577313	+	15.4	1000	Intergenic	Intergenic	-18166	NR_110836	101928782	Hs.571369	NR_110836	ENSG00000224865	LOC101928782	-	uncharacterized LOC101928782	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr7-200	chr7	154595826	154598317	+	48	2491	"intron (NM_001936, intron 15 of 25)"	"intron (NM_001936, intron 15 of 25)"	-123156	NR_024477	100132707	Hs.586358	NR_024476	ENSG00000214106	PAXIP1-AS2	PAXIP1OS	PAXIP1 antisense RNA 2	ncRNA	48.01	7.77	6.178893179	1.86E-17
chr7-2000	chr7	132017905	132018905	+	16	1000	"intron (NM_020911, intron 3 of 31)"	"intron (NM_020911, intron 3 of 31)"	72785	NR_134565	101928807	Hs.552131	NR_134565		LOC101928807	-	uncharacterized LOC101928807	ncRNA	16	3.88	4.12371134	7.91E-05
chr7-2003	chr7	132186765	132189735	+	33.3	2970	"intron (NM_001105543, intron 2 of 3)"	"intron (NM_001105543, intron 2 of 3)"	73073	NM_020911	91584	Hs.511454	NM_020911	ENSG00000221866	PLXNA4	FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003	plexin A4	protein-coding	33.28	5.82	5.718213058	4.04E-12
chr7-2005	chr7	132259485	132260485	+	13.4	1000	"intron (NM_181775, intron 2 of 4)"	"intron (NM_181775, intron 2 of 4)"	1338	NM_020911	91584	Hs.511454	NM_020911	ENSG00000221866	PLXNA4	FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003	plexin A4	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr7-2007	chr7	132299080	132300080	+	14.7	1000	"intron (NM_181775, intron 2 of 4)"	"intron (NM_181775, intron 2 of 4)"	33867	NM_181775	91584	Hs.511454	NM_020911	ENSG00000221866	PLXNA4	FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003	plexin A4	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr7-2008	chr7	132301658	132302658	+	16	1000	"intron (NM_181775, intron 2 of 4)"	"intron (NM_181775, intron 2 of 4)"	31289	NM_181775	91584	Hs.511454	NM_020911	ENSG00000221866	PLXNA4	FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003	plexin A4	protein-coding	16	2.43	6.58436214	7.90E-07
chr7-2010	chr7	132779876	132780876	+	14.7	1000	Intergenic	L2c|LINE|L2	12895	NR_133931	105375512	Hs.521205	NR_133931		LOC105375512	-	uncharacterized LOC105375512	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr7-2012	chr7	134002836	134003836	+	14.1	1000	Intergenic	Intergenic	-1509	NM_032826	84912	Hs.490181	NM_032826	ENSG00000205060	SLC35B4	YEA|YEA4	solute carrier family 35 member B4	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr7-2016	chr7	135006794	135007794	+	14.1	1000	Intergenic	PABL_B-int|LTR|ERV1	90563	NM_182489	346673	Hs.592279	NM_182489	ENSG00000146857	STRA8	-	stimulated by retinoic acid 8	protein-coding	14.08	0	14.5040551	3.99E-13
chr7-2018	chr7	135492412	135493412	+	14.7	1000	Intergenic	Intergenic	-59318	NM_205855	389558	Hs.55200	NM_205855	ENSG00000189320	FAM180A	UNQ1940	family with sequence similarity 180 member A	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr7-2019	chr7	135501031	135502031	+	14.7	1000	Intergenic	Intergenic	-67937	NM_205855	389558	Hs.55200	NM_205855	ENSG00000189320	FAM180A	UNQ1940	family with sequence similarity 180 member A	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-2029	chr7	139901412	139902989	+	23.7	1577	Intergenic	Intergenic	25139	NR_024451	100134229	Hs.634333	NR_024451	ENSG00000260231	JHDM1D-AS1	-	JHDM1D antisense RNA 1 (head to head)	ncRNA	23.68	3.88	6.103092784	4.22E-09
chr7-2032	chr7	140235499	140237227	+	27.5	1728	"intron (NM_015689, intron 14 of 19)"	"intron (NM_015689, intron 14 of 19)"	-56994	NM_001291663	23608	Hs.744883	NM_013446	ENSG00000133606	MKRN1	RNF61	makorin ring finger protein 1	protein-coding	27.52	4.85	5.674226804	7.61E-10
chr7-2034	chr7	140300893	140304346	+	44.2	3453	promoter-TSS (NR_134477)	promoter-TSS (NR_134477)	-277	NR_134477	27147	Hs.6385	NM_015689	ENSG00000146966	DENND2A	FAM31D|KIAA1277	DENN domain containing 2A	protein-coding	44.17	7.77	5.684684685	3.96E-15
chr7-2035	chr7	140687290	140688290	+	14.7	1000	Intergenic	Intergenic	26689	NM_016071	51650	Hs.416207	NM_016071	ENSG00000090263	MRPS33	CGI-139|MRP-S33|PTD003|S33mt	mitochondrial ribosomal protein S33	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-2036	chr7	140745686	140747558	+	28.2	1872	Intergenic	MLT1K|LTR|ERVL-MaLR	-27410	NM_001195278	100507421	Hs.283851	NM_001195278	ENSG00000261115	TMEM178B	-	transmembrane protein 178B	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr7-2037	chr7	140770102	140776104	+	90.3	6002	promoter-TSS (NM_001195278)	promoter-TSS (NM_001195278)	-929	NM_001195278	100507421	Hs.283851	NM_001195278	ENSG00000261115	TMEM178B	-	transmembrane protein 178B	protein-coding	90.25	12.62	7.151347068	1.86E-35
chr7-204	chr7	155243090	155246233	+	57.6	3143	Intergenic	Intergenic	-6163	NM_001427	2020	Hs.134989	NM_001427	ENSG00000164778	EN2	-	engrailed homeobox 2	protein-coding	57.61	12.62	4.564976228	2.92E-16
chr7-2045	chr7	141214627	141215627	+	14.1	1000	Intergenic	Intergenic	-35951	NM_018238	55750	Hs.743318	NM_018238	ENSG00000006530	AGK	CATC5|CTRCT38|MTDPS10|MULK	acylglycerol kinase	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr7-2047	chr7	142628577	142629577	+	15.4	1000	"intron (NM_019841, intron 1 of 14)"	AluSx1|SINE|Alu	1743	NM_019841	56302	Hs.283369	NM_019841	ENSG00000127412	TRPV5	CAT2|ECAC1|OTRPC3	transient receptor potential cation channel subfamily V member 5	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr7-205	chr7	155300647	155306811	+	107.5	6164	"intron (NM_001103176, intron 1 of 3)"	"intron (NM_001103176, intron 1 of 3)"	22810	NM_001103176	285888	Hs.146751	NM_001103176	ENSG00000146910	CNPY1	-	canopy FGF signaling regulator 1	protein-coding	107.53	22.33	4.81549485	1.98E-30
chr7-2050	chr7	143048601	143049601	+	15.4	1000	TTS (NM_000083)	TTS (NM_000083)	10072	NM_014690	9715	Hs.648908	NM_014690	ENSG00000159784	FAM131B	-	family with sequence similarity 131 member B	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr7-2052	chr7	145695632	145696632	+	14.7	1000	Intergenic	Intergenic	-117321	NM_014141	26047	Hs.655684	NM_014141	ENSG00000174469	CNTNAP2	AUTS15|CASPR2|CDFE|NRXN4|PTHSL1	contactin associated protein-like 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr7-2053	chr7	147690323	147691323	+	15.4	1000	"intron (NM_014141, intron 15 of 23)"	"intron (NM_014141, intron 15 of 23)"	64138	NR_036093	100422849		NR_036093	ENSG00000221296	MIR548T	-	microRNA 548t	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr7-2058	chr7	148204730	148205730	+	15.4	1000	Intergenic	L1MD2|LINE|L1	-82427	NM_145304	202865	Hs.352212	NM_145304	ENSG00000170279	C7orf33	-	chromosome 7 open reading frame 33	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr7-2064	chr7	148346440	148347693	+	19.2	1253	Intergenic	AluJr|SINE|Alu	-48867	NM_003592	8454	Hs.146806	NM_003592	ENSG00000055130	CUL1	-	cullin 1	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr7-2065	chr7	149015429	149016429	+	15.4	1000	Intergenic	L1PA17|LINE|L1	33557	NR_036573	155060	Hs.490512	NR_015357	ENSG00000244560	LOC155060	-	AI894139 pseudogene	pseudo	15.36	1.94	7.917525773	7.67E-08
chr7-2066	chr7	149360763	149361763	+	15.4	1000	Intergenic	MLT1H|LTR|ERVL-MaLR	-39382	NR_027789	79970	Hs.520785	NM_024910	ENSG00000133624	ZNF767P	ZNF767	"zinc finger family member 767, pseudogene"	pseudo	15.36	1.94	7.917525773	7.67E-08
chr7-2068	chr7	149396338	149397338	+	15.4	1000	Intergenic	Charlie25|DNA|hAT-Charlie	-15264	NM_032534	84626	Hs.299560	NM_032534	ENSG00000133619	KRBA1	-	KRAB-A domain containing 1	protein-coding	15.36	0	15.82260557	1.26E-14
chr7-2080	chr7	150610543	150612143	+	23.7	1600	Intergenic	MamRep605|Unknown|Unknown	41574	NM_001204798	3757	Hs.647099	NM_000238	ENSG00000055118	KCNH2	ERG-1|ERG1|H-ERG|HERG|HERG1|Kv11.1|LQT2|SQT1	potassium voltage-gated channel subfamily H member 2	protein-coding	23.68	3.4	6.964705882	5.45E-10
chr7-2084	chr7	150676870	150677870	+	14.1	1000	Intergenic	Intergenic	-1968	NM_000238	3757	Hs.647099	NM_000238	ENSG00000055118	KCNH2	ERG-1|ERG1|H-ERG|HERG|HERG1|Kv11.1|LQT2|SQT1	potassium voltage-gated channel subfamily H member 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr7-2085	chr7	150718935	150720468	+	27.5	1533	"intron (NR_133652, intron 4 of 16)"	AluSq2|SINE|Alu	1885	NM_001317056	285973	Hs.707300	NM_173681	ENSG00000181652	ATG9B	APG9L2|NOS3AS|SONE	autophagy related 9B	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr7-2086	chr7	150789812	150791286	+	21.8	1474	"intron (NM_001042535, intron 1 of 8)"	"intron (NM_001042535, intron 1 of 8)"	7040	NM_001042535	116988	Hs.647075	NM_031946	ENSG00000133612	AGAP3	AGAP-3|CENTG3|CRAG|MRIP-1|cnt-g3	"ArfGAP with GTPase domain, ankyrin repeat and PH domain 3"	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr7-2090	chr7	150863677	150866716	+	42.2	3039	promoter-TSS (NM_001098834)	promoter-TSS (NM_001098834)	-561	NM_001098834	2636		NM_001098834	ENSG00000164900	GBX1	Huh-17	gastrulation brain homeobox 1	protein-coding	42.25	0.97	43.55670103	5.85E-42
chr7-2093	chr7	150942776	150955622	+	225.9	12846	"intron (NM_001003802, intron 2 of 13)"	CpG	-3450	NM_001003801	6604	Hs.647067	NM_003078	ENSG00000082014	SMARCD3	BAF60C|CRACD3|Rsc6p	"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3"	protein-coding	225.95	27.18	8.313097866	1.23E-96
chr7-2097	chr7	150961412	150962412	+	14.7	1000	"intron (NM_001003802, intron 2 of 13)"	"intron (NM_001003802, intron 2 of 13)"	11908	NM_001003802	6604	Hs.647067	NM_003078	ENSG00000082014	SMARCD3	BAF60C|CRACD3|Rsc6p	"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3"	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr7-2098	chr7	150974477	150975477	+	14.7	1000	promoter-TSS (NM_003078)	promoter-TSS (NM_003078)	-746	NM_003078	6604	Hs.647067	NM_003078	ENSG00000082014	SMARCD3	BAF60C|CRACD3|Rsc6p	"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-2100	chr7	151240604	151241604	+	14.1	1000	Intergenic	Charlie2a|DNA|hAT-Charlie	-24094	NM_005614	6009	Hs.283521	NM_005614	ENSG00000106615	RHEB	RHEB2	Ras homolog enriched in brain	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr7-2103	chr7	151298086	151299086	+	15.4	1000	"intron (NM_016203, intron 5 of 15)"	"intron (NM_016203, intron 5 of 15)"	30758	NM_024429	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr7-2112	chr7	151520113	151521374	+	21.8	1261	"intron (NM_016203, intron 1 of 15)"	"intron (NM_016203, intron 1 of 15)"	-8786	NM_001040633	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr7-2113	chr7	151547345	151549095	+	25.6	1750	"intron (NM_016203, intron 1 of 15)"	"intron (NM_016203, intron 1 of 15)"	-25907	NR_038926	100505483	Hs.649054	NR_038926		PRKAG2-AS1	-	PRKAG2 antisense RNA 1	ncRNA	25.6	5.82	4.39862543	7.99E-08
chr7-2115	chr7	151613918	151614918	+	15.4	1000	Intergenic	AluSc5|SINE|Alu	-39046	NM_145292	168391	Hs.647077	NM_145292	ENSG00000106648	GALNTL5	GALNACT19|GALNT15|GalNAc-T5L	polypeptide N-acetylgalactosaminyltransferase-like 5	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr7-212	chr7	1296490	1298507	+	38.4	2017	Intergenic	Intergenic	24844	NM_001080461	340260	Hs.232272	NM_001080461	ENSG00000164853	UNCX	UNCX4.1	UNC homeobox	protein-coding	38.4	2.91	13.19587629	2.14E-23
chr7-2120	chr7	152594635	152595635	+	14.7	1000	Intergenic	LTR16A|LTR|ERVL	138301	NR_073000	57180	Hs.647117	NM_020445	ENSG00000133627	ACTR3B	ARP11|ARP3BETA	ARP3 actin related protein 3 homolog B	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr7-2124	chr7	153886000	153887000	+	12.8	1000	"intron (NM_130797, intron 1 of 25)"	MIRb|SINE|MIR	-115797	NM_001936	1804	Hs.490684	NM_001936	ENSG00000130226	DPP6	DPL1|DPPX|MRD33|VF2	dipeptidyl peptidase like 6	protein-coding	12.8	0.97	13.19587629	8.12E-09
chr7-2129	chr7	154405009	154406009	+	15.4	1000	"intron (NM_001290252, intron 5 of 23)"	"intron (NM_001290252, intron 5 of 23)"	-314718	NR_024477	100132707	Hs.586358	NR_024476	ENSG00000214106	PAXIP1-AS2	PAXIP1OS	PAXIP1 antisense RNA 2	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr7-2130	chr7	154435569	154436569	+	15.4	1000	"intron (NM_001936, intron 6 of 25)"	"intron (NM_001936, intron 6 of 25)"	-284158	NR_024477	100132707	Hs.586358	NR_024476	ENSG00000214106	PAXIP1-AS2	PAXIP1OS	PAXIP1 antisense RNA 2	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr7-2132	chr7	154499844	154500844	+	13.4	1000	"intron (NM_001936, intron 7 of 25)"	L1ME4a|LINE|L1	-219883	NR_024477	100132707	Hs.586358	NR_024476	ENSG00000214106	PAXIP1-AS2	PAXIP1OS	PAXIP1 antisense RNA 2	ncRNA	13.44	2.43	5.530864198	2.99E-05
chr7-2133	chr7	154553361	154554986	+	26.2	1625	"intron (NM_001936, intron 8 of 25)"	"intron (NM_001936, intron 8 of 25)"	-166054	NR_024477	100132707	Hs.586358	NR_024476	ENSG00000214106	PAXIP1-AS2	PAXIP1OS	PAXIP1 antisense RNA 2	ncRNA	26.24	2.91	9.017182131	6.53E-13
chr7-2151	chr7	155253694	155260820	+	119.1	7126	"3' UTR (NM_001427, exon 2 of 2)"	"3' UTR (NM_001427, exon 2 of 2)"	6433	NM_001427	2020	Hs.134989	NM_001427	ENSG00000164778	EN2	-	engrailed homeobox 2	protein-coding	119.06	17.96	6.629175947	3.86E-44
chr7-2160	chr7	155351845	155352845	+	14.1	1000	Intergenic	MLT1A0|LTR|ERVL-MaLR	-25806	NM_001103176	285888	Hs.146751	NM_001103176	ENSG00000146910	CNPY1	-	canopy FGF signaling regulator 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr7-2162	chr7	155592059	155598770	+	96	6711	"3' UTR (NM_000193, exon 3 of 3)"	"3' UTR (NM_000193, exon 3 of 3)"	6352	NM_001310462	6469	Hs.164537	NM_000193	ENSG00000164690	SHH	HHG1|HLP3|HPE3|MCOPCB5|SMMCI|TPT|TPTPS	sonic hedgehog	protein-coding	96.01	10.19	9.421982336	5.93E-46
chr7-2163	chr7	155603696	155606392	+	39	2696	promoter-TSS (NM_000193)	promoter-TSS (NM_000193)	-77	NM_000193	6469	Hs.164537	NM_000193	ENSG00000164690	SHH	HHG1|HLP3|HPE3|MCOPCB5|SMMCI|TPT|TPTPS	sonic hedgehog	protein-coding	39.04	8.74	4.466819222	5.52E-11
chr7-2165	chr7	155764119	155765119	+	14.1	1000	Intergenic	Intergenic	9293	NM_001291913	389602	Hs.583071	NM_001291913		LOC389602	-	uncharacterized LOC389602	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr7-2170	chr7	155918369	155919633	+	21.1	1264	Intergenic	Intergenic	163675	NM_001291913	389602	Hs.583071	NM_001291913		LOC389602	-	uncharacterized LOC389602	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr7-2178	chr7	156132691	156133691	+	13.4	1000	Intergenic	Intergenic	105091	NR_038232	285889	Hs.407095	NR_038232	ENSG00000233878	LOC285889	-	uncharacterized LOC285889	ncRNA	13.44	0.97	13.8556701	8.12E-09
chr7-2180	chr7	156351511	156352511	+	15.4	1000	"intron (NR_103858, intron 1 of 1)"	"intron (NR_103858, intron 1 of 1)"	18826	NR_024119	64433	Hs.404170	NR_024119	ENSG00000279418	LINC00244	C7orf4|NCRNA00244	long intergenic non-protein coding RNA 244	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr7-2185	chr7	156804870	156805870	+	14.7	1000	"intron (NR_038835, intron 1 of 1)"	AluSp|SINE|Alu	1819	NR_038835	645249	Hs.224879	NR_038835	ENSG00000243479	MNX1-AS1	CCAT5	MNX1 antisense RNA 1 (head to head)	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr7-2187	chr7	156839377	156840377	+	14.7	1000	Intergenic	Intergenic	36326	NR_038835	645249	Hs.224879	NR_038835	ENSG00000243479	MNX1-AS1	CCAT5	MNX1 antisense RNA 1 (head to head)	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr7-2189	chr7	157269818	157270818	+	14.1	1000	"intron (NR_110157, intron 2 of 3)"	"intron (NR_110157, intron 2 of 3)"	11393	NR_110157	101927914	Hs.623826	NR_110157	ENSG00000234210	LOC101927914	-	uncharacterized LOC101927914	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr7-2191	chr7	157543204	157544204	+	14.1	1000	"intron (NM_130843, intron 11 of 21)"	"intron (NM_130843, intron 11 of 21)"	-103573	NR_038966	100506585	Hs.661265	NR_038966	ENSG00000233038	LOC100506585	-	uncharacterized LOC100506585	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr7-2193	chr7	157590294	157591294	+	15.4	1000	"intron (NM_130843, intron 11 of 21)"	AluSx|SINE|Alu	-56483	NR_038966	100506585	Hs.661265	NR_038966	ENSG00000233038	LOC100506585	-	uncharacterized LOC100506585	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr7-2199	chr7	157648735	157649735	+	14.7	1000	"intron (NR_038966, intron 2 of 3)"	Charlie7|DNA|hAT-Charlie	1958	NR_038966	100506585	Hs.661265	NR_038966	ENSG00000233038	LOC100506585	-	uncharacterized LOC100506585	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr7-2201	chr7	157729457	157730457	+	14.1	1000	"intron (NM_130843, intron 10 of 21)"	"intron (NM_130843, intron 10 of 21)"	82680	NR_038966	100506585	Hs.661265	NR_038966	ENSG00000233038	LOC100506585	-	uncharacterized LOC100506585	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr7-2203	chr7	157967883	157969736	+	29.4	1853	"intron (NM_130843, intron 5 of 21)"	"intron (NM_130843, intron 5 of 21)"	321532	NR_038966	100506585	Hs.661265	NR_038966	ENSG00000233038	LOC100506585	-	uncharacterized LOC100506585	ncRNA	29.44	4.37	6.736842105	2.70E-12
chr7-2208	chr7	158784938	158785938	+	14.7	1000	Intergenic	CpG	-15607	NR_024394	154822	Hs.544783	NM_198345	ENSG00000231419	LINC00689	-	long intergenic non-protein coding RNA 689	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr7-221	chr7	43336412	43337672	+	23.7	1260	"intron (NM_015052, intron 3 of 29)"	"intron (NM_015052, intron 3 of 29)"	146548	NR_037508	100500829		NR_037508	ENSG00000264069	MIR3943	-	microRNA 3943	ncRNA	23.68	3.88	6.103092784	4.22E-09
chr7-2213	chr7	159007227	159008559	+	17.9	1332	Intergenic	Intergenic	-70244	NR_130758	7434	Hs.585052	NM_003382	ENSG00000106018	VIPR2	C16DUPq36.3|DUP7q36.3|PACAP-R-3|PACAP-R3|VIP-R-2|VPAC2|VPAC2R|VPCAP2R	vasoactive intestinal peptide receptor 2	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr7-224	chr7	100611453	100612949	+	26.2	1496	promoter-TSS (NM_001164462)	promoter-TSS (NM_001164462)	-703	NM_001164462	10071	Hs.489355	NM_001164462	ENSG00000205277	MUC12	MUC-11|MUC-12|MUC11	"mucin 12, cell surface associated"	protein-coding	26.24	4.37	6.004576659	7.40E-10
chr7-225	chr7	105333044	105334044	+	20.5	1000	"intron (NM_020725, intron 3 of 11)"	"intron (NM_020725, intron 3 of 11)"	-13896	NM_001318229	222255	Hs.745056	NM_020725	ENSG00000146776	ATXN7L1	ATXN7L4	ataxin 7 like 1	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr7-226	chr7	108094384	108097117	+	53.8	2733	"intron (NM_005010, intron 1 of 27)"	CpG	1091	NM_001193584	4897	Hs.21422	NM_005010	ENSG00000091129	NRCAM	-	neuronal cell adhesion molecule	protein-coding	53.77	6.8	7.907352941	1.13E-23
chr7-233	chr7	148678507	148679507	+	19.8	1000	Intergenic	AluSx1|SINE|Alu	-5612	NR_130107	102723099	Hs.621982	NR_130107	ENSG00000281189	GHET1	lncRNA-GHET1	gastric carcinoma proliferation enhancing transcript 1	ncRNA	19.84	4.37	4.540045767	3.16E-06
chr7-248	chr7	157258065	157259317	+	22.4	1252	promoter-TSS (NR_110157)	promoter-TSS (NR_110157)	-234	NR_110157	101927914	Hs.623826	NR_110157	ENSG00000234210	LOC101927914	-	uncharacterized LOC101927914	ncRNA	22.4	4.85	4.618556701	5.54E-07
chr7-250	chr7	67351	68351	+	20.5	1000	Intergenic	ERVL-E-int|LTR|ERVL	81587	NR_134325	102723672	Hs.605204	NR_134325		LOC102723672	-	uncharacterized LOC102723672	ncRNA	20.48	4.37	4.686498856	6.64E-07
chr7-258	chr7	2443623	2445355	+	30.7	1732	"intron (NM_018641, intron 1 of 1)"	"intron (NM_018641, intron 1 of 1)"	1294	NM_001243794	55501	Hs.744987	NM_018641	ENSG00000136213	CHST12	C4S-2|C4ST-2|C4ST2	carbohydrate sulfotransferase 12	protein-coding	30.72	3.4	9.035294118	1.89E-15
chr7-263	chr7	6565517	6567875	+	46.1	2358	"intron (NM_001145118, intron 2 of 21)"	"intron (NM_001145118, intron 2 of 21)"	24371	NM_001145118	392862	Hs.512174	NM_001145118	ENSG00000215045	GRID2IP	DELPHILIN	Grid2 interacting protein	protein-coding	46.09	3.88	11.87886598	3.15E-26
chr7-265	chr7	25891694	25894050	+	46.1	2356	Intergenic	Intergenic	96734	NR_029597	406940		NR_029597	ENSG00000199085	MIR148A	MIRN148|MIRN148A|hsa-mir-148|mir-148a	microRNA 148a	ncRNA	46.09	8.25	5.586666667	7.02E-16
chr7-266	chr7	26916861	26917861	+	21.8	1000	Intergenic	AluJb|SINE|Alu	-12999	NM_003930	8935	Hs.200770	NM_003930	ENSG00000005020	SKAP2	PRAP|RA70|SAPS|SCAP2|SKAP-HOM|SKAP55R	src kinase associated phosphoprotein 2	protein-coding	21.76	1.46	14.90410959	8.59E-15
chr7-273	chr7	30027784	30029273	+	28.8	1489	"intron (NM_001145514, intron 1 of 7)"	CpG	897	NM_001145515	9805	Hs.520740	NM_014766	ENSG00000136193	SCRN1	SES1	secernin 1	protein-coding	28.8	2.91	9.896907216	7.24E-15
chr7-275	chr7	42927387	42929595	+	47.4	2208	Intergenic	Intergenic	23198	NM_001099858	79020	Hs.698120	NM_024054	ENSG00000136197	C7orf25	-	chromosome 7 open reading frame 25	protein-coding	47.37	3.88	12.20876289	2.57E-27
chr7-276	chr7	44215195	44216195	+	17.9	1000	"intron (NM_000162, intron 1 of 9)"	"intron (NM_000162, intron 1 of 9)"	13327	NM_000162	2645	Hs.1270	NM_000162	ENSG00000106633	GCK	FGQTL3|GK|GLK|HHF3|HK4|HKIV|HXKP|LGLK|MODY2	glucokinase	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr7-279	chr7	55166033	55167490	+	27.5	1457	"intron (NM_001346941, intron 1 of 21)"	"intron (NM_001346941, intron 1 of 21)"	-10749	NM_001346900	1956	Hs.488293	NM_005228	ENSG00000146648	EGFR	ERBB|ERBB1|HER1|NISBD2|PIG61|mENA	epidermal growth factor receptor	protein-coding	27.52	2.91	9.457044674	7.03E-14
chr7-281	chr7	73062746	73064019	+	22.4	1273	Intergenic	CT-rich|Low_complexity|Low_complexity	-18792	NM_001077621	155382	Hs.647037	NM_152560	ENSG00000176428	VPS37D	WBSCR24	"VPS37D, ESCRT-I subunit"	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr7-283	chr7	101029531	101030531	+	19.8	1000	"intron (NM_001278563, intron 1 of 13)"	"intron (NM_001278563, intron 1 of 13)"	23930	NM_001278563	136227	Hs.654854	NM_133457	ENSG00000160963	COL26A1	EMI6|EMID2|EMU2|SH2B	collagen type XXVI alpha 1 chain	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr7-286	chr7	104520897	104521897	+	20.5	1000	"intron (NM_199000, intron 2 of 2)"	AluY|SINE|Alu	45695	NR_027374	723809	Hs.124316	NR_027374	ENSG00000225329	LHFPL3-AS2	-	LHFPL3 antisense RNA 2	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr7-289	chr7	107300996	107302262	+	24.3	1266	"intron (NM_000441, intron 1 of 20)"	CpG	549	NM_000441	5172	Hs.571246	NM_000441	ENSG00000091137	SLC26A4	DFNB4|EVA|PDS|TDH2B	solute carrier family 26 member 4	protein-coding	24.32	2.91	8.357388316	5.77E-12
chr7-290	chr7	107498358	107499358	+	19.8	1000	Intergenic	L2a|LINE|L2	-32694	NM_001289750	1738	Hs.131711	NM_000108	ENSG00000091140	DLD	DLDD|DLDH|E3|GCSL|LAD|PHE3	dihydrolipoamide dehydrogenase	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr7-301	chr7	134903625	134904625	+	21.1	1000	Intergenic	AluJb|SINE|Alu	-7809	NM_014149	29062	Hs.459858	NM_014149	ENSG00000105875	WDR91	HSPC049|SORF-1|SORF1	WD repeat domain 91	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr7-302	chr7	141081300	141082675	+	19.8	1375	"intron (NM_001195278, intron 2 of 3)"	L2|LINE|L2	-169091	NM_018238	55750	Hs.743318	NM_018238	ENSG00000006530	AGK	CATC5|CTRCT38|MTDPS10|MULK	acylglycerol kinase	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr7-307	chr7	150884833	150887196	+	39.7	2363	Intergenic	L1MA9|LINE|L1	-1095	NM_080871	136371	Hs.647081	NM_080871	ENSG00000146926	ASB10	GLC1F	ankyrin repeat and SOCS box containing 10	protein-coding	39.69	7.77	5.108108108	6.49E-13
chr7-311	chr7	150958409	150959684	+	22.4	1275	"intron (NM_001003802, intron 2 of 13)"	"intron (NM_001003802, intron 2 of 13)"	-13297	NM_001003801	6604	Hs.647067	NM_003078	ENSG00000082014	SMARCD3	BAF60C|CRACD3|Rsc6p	"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3"	protein-coding	22.4	4.37	5.125858124	1.32E-07
chr7-312	chr7	151275055	151276501	+	23	1446	"intron (NM_016203, intron 6 of 15)"	"intron (NM_016203, intron 6 of 15)"	53566	NM_024429	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr7-318	chr7	155194119	155199038	+	76.8	4919	Intergenic	Intergenic	-35950	NR_103545	338436	Hs.521326	NR_103545	ENSG00000204960	BLACE	-	B-cell acute lymphoblastic leukemia expressed	ncRNA	76.81	13.59	5.651949963	1.29E-25
chr7-324	chr7	155955167	155956167	+	19.8	1000	Intergenic	Intergenic	200341	NM_001291913	389602	Hs.583071	NM_001291913		LOC389602	-	uncharacterized LOC389602	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr7-326	chr7	158935406	158938471	+	71.7	3065	"intron (NR_130758, intron 1 of 12)"	CpG	711	NM_001304522	7434	Hs.585052	NM_003382	ENSG00000106018	VIPR2	C16DUPq36.3|DUP7q36.3|PACAP-R-3|PACAP-R3|VIP-R-2|VPAC2|VPAC2R|VPCAP2R	vasoactive intestinal peptide receptor 2	protein-coding	71.69	7.77	9.226512227	2.55E-34
chr7-328	chr7	53976	55615	+	25.6	1639	Intergenic	Intergenic	94643	NR_134325	102723672	Hs.605204	NR_134325		LOC102723672	-	uncharacterized LOC102723672	ncRNA	25.6	2.91	8.797250859	6.53E-13
chr7-33	chr7	20837995	20838995	+	26.2	1000	Intergenic	MER5A|DNA|hAT-Charlie	-11987	NM_182700	221833	Hs.195922	NM_182700	ENSG00000164651	SP8	BTD	Sp8 transcription factor	protein-coding	26.24	1.94	13.5257732	4.03E-16
chr7-330	chr7	136671	138419	+	31.4	1748	Intergenic	LTR56|LTR|ERV1	11893	NR_134325	102723672	Hs.605204	NR_134325		LOC102723672	-	uncharacterized LOC102723672	ncRNA	31.36	6.8	4.611764706	2.53E-09
chr7-332	chr7	4180648	4181648	+	18.6	1000	"intron (NM_152744, intron 28 of 44)"	"intron (NM_152744, intron 28 of 44)"	11831	NM_001079653	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding	18.56	1.94	9.567010309	9.53E-10
chr7-335	chr7	24321747	24322747	+	19.2	1000	Intergenic	Intergenic	-1560	NM_000905	4852	Hs.1832	NM_000905	ENSG00000122585	NPY	PYY4	neuropeptide Y	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr7-336	chr7	27209348	27218192	+	121	8844	"exon (NM_018951, exon 1 of 2)"	"exon (NM_018951, exon 1 of 2)"	185	NM_018951	3206	Hs.110637	NM_018951	ENSG00000253293	HOXA10	HOX1|HOX1.8|HOX1H|PL	homeobox A10	protein-coding	120.98	16.5	7.332121212	6.25E-48
chr7-343	chr7	31113347	31114643	+	19.8	1296	"intron (NM_001118, intron 3 of 15)"	L2a|LINE|L2	21919	NM_001199636	117	Hs.377783	NM_001118	ENSG00000078549	ADCYAP1R1	PAC1|PAC1R|PACAPR|PACAPRI	ADCYAP receptor type I	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr7-35	chr7	100090325	100091988	+	35.8	1663	"intron (NM_173564, intron 6 of 6)"	"intron (NM_173564, intron 6 of 6)"	9606	NM_173564	222950	Hs.320086	NM_173564	ENSG00000166924	NYAP1	C7orf51	neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1	protein-coding	35.84	6.31	5.679873217	7.13E-13
chr7-351	chr7	69064036	69065677	+	28.2	1641	"exon (NM_001127232, exon 1 of 5)"	"exon (NM_001127232, exon 1 of 5)"	951	NM_001127231	26053	Hs.21631	NM_015570	ENSG00000158321	AUTS2	FBRSL2|MRD26	autism susceptibility candidate 2	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr7-355	chr7	101177223	101178223	+	18.6	1000	"intron (NM_001278563, intron 4 of 13)"	(CA)n|Simple_repeat|Simple_repeat	34563	NR_103748	100506527	Hs.535863	NR_103747	ENSG00000233123	LINC01007	-	long intergenic non-protein coding RNA 1007	ncRNA	18.56	3.4	5.458823529	8.42E-07
chr7-356	chr7	107641278	107642795	+	24.3	1517	"exon (NM_002291, exon 3 of 34)"	"exon (NM_002291, exon 3 of 34)"	1768	NM_002291	3912	Hs.650585	NM_002291	ENSG00000091136	LAMB1	CLM|LIS5	laminin subunit beta 1	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr7-357	chr7	126873308	126875382	+	35.2	2074	"intron (NM_001127323, intron 2 of 10)"	"intron (NM_001127323, intron 2 of 10)"	9224	NM_000845	2918	Hs.449625	NM_000845	ENSG00000179603	GRM8	GLUR8|GPRC1H|MGLUR8|mGlu8	glutamate metabotropic receptor 8	protein-coding	35.2	7.77	4.53024453	3.74E-10
chr7-363	chr7	129418514	129421506	+	52.5	2992	Intergenic	CpG	-5156	NR_029615	406959		NR_029615	ENSG00000207691	MIR183	MIRN183|miR-183|miRNA183	microRNA 183	ncRNA	52.49	9.71	5.40576725	2.20E-17
chr7-366	chr7	135508935	135510260	+	22.4	1325	Intergenic	Intergenic	-76003	NM_205855	389558	Hs.55200	NM_205855	ENSG00000189320	FAM180A	UNQ1940	family with sequence similarity 180 member A	protein-coding	22.4	2.43	9.218106996	2.49E-11
chr7-379	chr7	151747395	151748395	+	19.2	1000	"intron (NM_001304514, intron 1 of 10)"	L1MA3|LINE|L1	25136	NM_022087	63917	Hs.647109	NM_022087	ENSG00000178234	GALNT11	GALNAC-T11|GALNACT11	polypeptide N-acetylgalactosaminyltransferase 11	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr7-382	chr7	155221554	155223391	+	30.7	1837	Intergenic	Intergenic	-28352	NM_001427	2020	Hs.134989	NM_001427	ENSG00000164778	EN2	-	engrailed homeobox 2	protein-coding	30.72	4.85	6.334020619	3.34E-12
chr7-386	chr7	155324183	155331457	+	112.7	7274	Intergenic	Intergenic	-1281	NM_001103176	285888	Hs.146751	NM_001103176	ENSG00000146910	CNPY1	-	canopy FGF signaling regulator 1	protein-coding	112.65	14.56	7.736950549	5.94E-47
chr7-391	chr7	156870648	156872012	+	25	1364	Intergenic	Intergenic	-60325	NM_014671	9690	Hs.118351	NM_014671	ENSG00000009335	UBE3C	HECTH2	ubiquitin protein ligase E3C	protein-coding	24.96	2.91	8.577319588	5.77E-12
chr7-392	chr7	157250395	157251933	+	26.2	1538	Intergenic	Intergenic	-7761	NR_110157	101927914	Hs.623826	NR_110157	ENSG00000234210	LOC101927914	-	uncharacterized LOC101927914	ncRNA	26.24	3.4	7.717647059	9.95E-12
chr7-400	chr7	2666352	2667352	+	17.3	1000	Intergenic	G-rich|Low_complexity|Low_complexity	-4751	NM_025250	80727	Hs.440899	NM_025250	ENSG00000136295	TTYH3	-	tweety family member 3	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr7-401	chr7	3949942	3950942	+	17.9	1000	"intron (NM_152744, intron 5 of 44)"	"intron (NM_152744, intron 5 of 44)"	-218875	NM_001079653	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr7-408	chr7	24797089	24798898	+	33.9	1809	promoter-TSS (NM_004403)	promoter-TSS (NM_004403)	-354	NM_001127454	1687	Hs.520708	NM_004403	ENSG00000105928	DFNA5	ICERE-1	"DFNA5, deafness associated tumor suppressor"	protein-coding	33.92	6.8	4.988235294	1.08E-10
chr7-419	chr7	31119770	31121486	+	30.7	1716	"intron (NM_001118, intron 5 of 15)"	"intron (NM_001118, intron 5 of 15)"	28552	NM_001199636	117	Hs.377783	NM_001118	ENSG00000078549	ADCYAP1R1	PAC1|PAC1R|PACAPR|PACAPRI	ADCYAP receptor type I	protein-coding	30.72	3.4	9.035294118	1.89E-15
chr7-427	chr7	70157545	70161505	+	60.8	3960	"intron (NM_015570, intron 5 of 18)"	CpG	-437998	NM_022479	64409	Hs.488591	NM_022479	ENSG00000185274	WBSCR17	GALNACT17|GALNT16|GALNT20|GALNTL3|GalNAc-T5L	Williams-Beuren syndrome chromosome region 17	protein-coding	60.81	7.28	8.353021978	4.49E-27
chr7-429	chr7	77647485	77648485	+	18.6	1000	"3' UTR (NM_012301, exon 22 of 22)"	"3' UTR (NM_012301, exon 22 of 22)"	178538	NM_001127357	57157	Hs.203965	NM_020432	ENSG00000006576	PHTF2	-	putative homeodomain transcription factor 2	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr7-431	chr7	95063675	95065070	+	24.3	1395	promoter-TSS (NM_000305)	promoter-TSS (NM_000305)	12	NM_000305	5445	Hs.514420	NM_000305	ENSG00000105854	PON2	-	paraoxonase 2	protein-coding	24.32	2.91	8.357388316	5.77E-12
chr7-436	chr7	101156177	101158784	+	44.8	2607	"intron (NM_001278563, intron 3 of 13)"	AluSx1|SINE|Alu	54806	NR_103748	100506527	Hs.535863	NR_103747	ENSG00000233123	LINC01007	-	long intergenic non-protein coding RNA 1007	ncRNA	44.81	5.82	7.699312715	1.25E-19
chr7-439	chr7	105584435	105586048	+	30.1	1613	Intergenic	MLT1C|LTR|ERVL-MaLR	-18416	NM_152750	222256	Hs.150120	NM_152750	ENSG00000128536	CDHR3	CDH28	cadherin related family member 3	protein-coding	30.08	6.31	4.76703645	3.01E-09
chr7-441	chr7	105656691	105657691	+	17.9	1000	"intron (NM_152750, intron 11 of 18)"	"intron (NM_152750, intron 11 of 18)"	53534	NM_001301161	222256	Hs.150120	NM_152750	ENSG00000128536	CDHR3	CDH28	cadherin related family member 3	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr7-442	chr7	105674055	105675055	+	19.2	1000	"3' UTR (NM_001301161, exon 18 of 18)"	"3' UTR (NM_001301161, exon 18 of 18)"	70898	NM_001301161	222256	Hs.150120	NM_152750	ENSG00000128536	CDHR3	CDH28	cadherin related family member 3	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr7-447	chr7	113722228	113725402	+	55	3174	Intergenic	Intergenic	-2550	NR_033766	93986	Hs.282787	NM_014491	ENSG00000128573	FOXP2	CAGH44|SPCH1|TNRC10	forkhead box P2	protein-coding	55.05	13.59	4.050772627	6.99E-14
chr7-448	chr7	121968368	121969694	+	22.4	1326	"intron (NM_001009571, intron 26 of 27)"	"intron (NM_001009571, intron 26 of 27)"	-24466	NM_001024613	389549	Hs.553970	NM_001024613	ENSG00000128610	FEZF1	FEZ|HH22|ZNF312B	FEZ family zinc finger 1	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr7-450	chr7	131226427	131227677	+	17.9	1250	"intron (NM_001018111, intron 1 of 8)"	"intron (NM_001018111, intron 1 of 8)"	14324	NM_005397	5420	Hs.744213	NM_005397	ENSG00000128567	PODXL	Gp200|PC|PCLP|PCLP-1	podocalyxin like	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr7-453	chr7	135699234	135700234	+	19.2	1000	Intergenic	L1MD|LINE|L1	-37530	NM_001128619	767558	Hs.602015	NM_001128619	ENSG00000267697	LUZP6	MPD6|MTPNUT	leucine zipper protein 6	protein-coding	19.2	0.97	19.79381443	5.65E-15
chr7-459	chr7	141188582	141189838	+	19.8	1256	Intergenic	Intergenic	-61868	NM_018238	55750	Hs.743318	NM_018238	ENSG00000006530	AGK	CATC5|CTRCT38|MTDPS10|MULK	acylglycerol kinase	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr7-460	chr7	141402140	141405583	+	51.8	3443	TTS (NR_015392)	TTS (NR_015392)	-1908	NM_001080392	57189	Hs.521240	NM_001080392	ENSG00000257093	KIAA1147	LCHN|PRO2561	KIAA1147	protein-coding	51.85	8.74	5.932494279	3.69E-18
chr7-482	chr7	154659819	154660819	+	17.9	1000	"intron (NM_001936, intron 18 of 25)"	L2b|LINE|L2	-59908	NR_024477	100132707	Hs.586358	NR_024476	ENSG00000214106	PAXIP1-AS2	PAXIP1OS	PAXIP1 antisense RNA 2	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr7-483	chr7	154703017	154704017	+	19.2	1000	Intergenic	Intergenic	-16710	NR_024477	100132707	Hs.586358	NR_024476	ENSG00000214106	PAXIP1-AS2	PAXIP1OS	PAXIP1 antisense RNA 2	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr7-484	chr7	154866731	154867731	+	19.8	1000	"intron (NM_024012, intron 1 of 1)"	"intron (NM_024012, intron 1 of 1)"	-3964	NR_038945	100128264	Hs.248137	NR_038945	ENSG00000220575	HTR5A-AS1	HTR5AOS	HTR5A antisense RNA 1	ncRNA	19.84	3.88	5.113402062	7.67E-07
chr7-485	chr7	155016594	155018992	+	39.7	2398	Intergenic	(CAGAGA)n|Simple_repeat|Simple_repeat	-71689	NM_001346590	3638	Hs.520819	NM_005542	ENSG00000186480	INSIG1	CL6	insulin induced gene 1	protein-coding	39.69	5.34	7.43258427	3.64E-17
chr7-489	chr7	155209388	155211106	+	30.7	1718	Intergenic	Intergenic	-40577	NM_001427	2020	Hs.134989	NM_001427	ENSG00000164778	EN2	-	engrailed homeobox 2	protein-coding	30.72	2.91	10.55670103	6.73E-17
chr7-495	chr7	155297500	155298500	+	19.2	1000	"intron (NM_001103176, intron 3 of 3)"	"intron (NM_001103176, intron 3 of 3)"	28539	NM_001103176	285888	Hs.146751	NM_001103176	ENSG00000146910	CNPY1	-	canopy FGF signaling regulator 1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr7-500	chr7	155971351	155972870	+	22.4	1519	Intergenic	Intergenic	216784	NM_001291913	389602	Hs.583071	NM_001291913		LOC389602	-	uncharacterized LOC389602	protein-coding	22.4	2.43	9.218106996	2.49E-11
chr7-504	chr7	157316890	157318145	+	19.2	1255	Intergenic	GA-rich|Low_complexity|Low_complexity	49597	NR_029689	406945		NR_029689	ENSG00000207960	MIR153-2	MIRN153-2|mir-153-2	microRNA 153-2	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr7-505	chr7	157535473	157536473	+	17.9	1000	"intron (NM_130843, intron 11 of 21)"	"intron (NM_130843, intron 11 of 21)"	-111304	NR_038966	100506585	Hs.661265	NR_038966	ENSG00000233038	LOC100506585	-	uncharacterized LOC100506585	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr7-506	chr7	157642141	157643473	+	21.1	1332	"intron (NM_130843, intron 11 of 21)"	"intron (NM_130843, intron 11 of 21)"	-4470	NR_038966	100506585	Hs.661265	NR_038966	ENSG00000233038	LOC100506585	-	uncharacterized LOC100506585	ncRNA	21.12	1.46	14.46575342	1.29E-13
chr7-509	chr7	179445	185278	+	87.7	5833	Intergenic	Intergenic	7441	NR_134324	105375115	Hs.299538	NR_134324	ENSG00000239715	LOC105375115	-	uncharacterized LOC105375115	ncRNA	87.69	10.68	8.210674157	4.82E-38
chr7-511	chr7	1323431	1328932	+	76.2	5501	Intergenic	FLAM_A|SINE|Alu	53527	NM_001080461	340260	Hs.232272	NM_001080461	ENSG00000164853	UNCX	UNCX4.1	UNC homeobox	protein-coding	76.17	14.56	5.231456044	2.04E-23
chr7-513	chr7	1381202	1382468	+	19.8	1266	Intergenic	Intergenic	109181	NM_001080461	340260	Hs.232272	NM_001080461	ENSG00000164853	UNCX	UNCX4.1	UNC homeobox	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr7-515	chr7	3320561	3321813	+	21.8	1252	Intergenic	AluJr|SINE|Alu	-19893	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr7-519	chr7	5632495	5633799	+	22.4	1304	"exon (NM_003088, exon 1 of 5)"	"exon (NM_003088, exon 1 of 5)"	711	NM_003088	6624	Hs.118400	NM_003088	ENSG00000075618	FSCN1	FAN1|HSN|SNL|p55	fascin actin-bundling protein 1	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr7-522	chr7	22766451	22768031	+	28.2	1580	promoter-TSS (NR_131935)	promoter-TSS (NR_131935)	-2	NR_131935	541472	Hs.512234	NR_131935	ENSG00000179428	LOC541472	-	uncharacterized LOC541472	ncRNA	28.16	3.88	7.257731959	1.97E-12
chr7-523	chr7	23296396	23297946	+	28.2	1550	"intron (NM_001005340, intron 4 of 10)"	AluSx|SINE|Alu	10855	NM_001005340	10457	Hs.190495	NM_002510	ENSG00000136235	GPNMB	HGFIN|NMB	glycoprotein nmb	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr7-524	chr7	24325104	24327533	+	35.2	2429	"intron (NM_000905, intron 2 of 3)"	"intron (NM_000905, intron 2 of 3)"	2511	NM_000905	4852	Hs.1832	NM_000905	ENSG00000122585	NPY	PYY4	neuropeptide Y	protein-coding	35.2	6.8	5.176470588	2.10E-11
chr7-526	chr7	24531821	24532821	+	17.9	1000	Intergenic	L2c|LINE|L2	-80644	NM_001303037	51678	Hs.533355	NM_016447	ENSG00000105926	MPP6	PALS2|VAM-1|VAM1|p55T	membrane palmitoylated protein 6	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr7-527	chr7	24607579	24608579	+	17.3	1000	Intergenic	Intergenic	-4886	NM_001303037	51678	Hs.533355	NM_016447	ENSG00000105926	MPP6	PALS2|VAM-1|VAM1|p55T	membrane palmitoylated protein 6	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr7-532	chr7	27248384	27249634	+	23	1250	Intergenic	Intergenic	8969	NR_037843	100316868	Hs.199486	NR_037843		HOTTIP	HOXA-AS6|HOXA13-AS1|NCRNA00213	HOXA distal transcript antisense RNA	ncRNA	23.04	2.91	7.917525773	4.85E-11
chr7-535	chr7	27291020	27292443	+	23	1423	Intergenic	CpG	-4883	NR_120507	101410536	Hs.687800	NR_120507	ENSG00000253405	EVX1-AS	EVX1-AS1	EVX1 antisense RNA	ncRNA	23.04	2.43	9.481481481	2.61E-12
chr7-537	chr7	28997499	28998965	+	24.3	1466	promoter-TSS (NM_014817)	promoter-TSS (NM_014817)	-203	NM_014817	9865	Hs.744120	NM_014817	ENSG00000255690	TRIL	-	TLR4 interactor with leucine rich repeats	protein-coding	24.32	4.37	5.565217391	4.38E-09
chr7-538	chr7	29264407	29265407	+	16.6	1000	"intron (NM_001293072, intron 1 of 12)"	"intron (NM_001293072, intron 1 of 12)"	-16321	NR_120522	102724484	Hs.638665	NR_120522		LOC102724484	-	uncharacterized LOC102724484	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr7-543	chr7	35589651	35591245	+	27.5	1594	Intergenic	Intergenic	144324	NM_022373	64224	Hs.643051	NM_022373	ENSG00000122557	HERPUD2	-	HERPUD family member 2	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr7-545	chr7	43797478	43798478	+	17.9	1000	promoter-TSS (NM_000712)	promoter-TSS (NM_000712)	-294	NM_000712	644	Hs.488143	NM_000712	ENSG00000106605	BLVRA	BLVR|BVR|BVRA	biliverdin reductase A	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr7-55	chr7	29844578	29847753	+	56.3	3175	promoter-TSS (NM_001080529)	promoter-TSS (NM_001080529)	-5	NM_001080529	644150	Hs.380698	NM_001080529	ENSG00000122574	WIPF3	CR16	WAS/WASL interacting protein family member 3	protein-coding	56.33	7.28	7.737637363	2.40E-24
chr7-550	chr7	50911690	50912690	+	17.9	1000	Intergenic	Charlie2b|DNA|hAT-Charlie	-51031	NM_001001555	2887	Hs.164060	NM_005311	ENSG00000106070	GRB10	GRB-IR|Grb-10|IRBP|MEG1|RSS	growth factor receptor bound protein 10	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr7-551	chr7	55198049	55199049	+	17.9	1000	"intron (NM_001346900, intron 1 of 27)"	"intron (NM_001346900, intron 1 of 27)"	21039	NM_001346900	1956	Hs.488293	NM_005228	ENSG00000146648	EGFR	ERBB|ERBB1|HER1|NISBD2|PIG61|mENA	epidermal growth factor receptor	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr7-558	chr7	86687426	86688426	+	18.6	1000	"intron (NM_001142749, intron 1 of 21)"	"intron (NM_001142749, intron 1 of 21)"	1088	NM_001142749	222223	Hs.208093	NM_152748	ENSG00000164659	KIAA1324L	EIG121L	KIAA1324 like	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr7-561	chr7	100822385	100823385	+	17.9	1000	"intron (NM_198571, intron 1 of 3)"	"intron (NM_198571, intron 1 of 3)"	672	NM_198571	375607	Hs.213044	NM_198571	ENSG00000167011	NAT16	C7orf52	N-acetyltransferase 16 (putative)	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr7-564	chr7	103255574	103256838	+	21.1	1264	"intron (NM_173054, intron 20 of 63)"	"intron (NM_173054, intron 20 of 63)"	-169582	NM_206885	375611	Hs.585146	NM_198999	ENSG00000170615	SLC26A5	DFNB61|PRES	solute carrier family 26 member 5	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr7-565	chr7	105421751	105423001	+	19.8	1250	"intron (NM_152749, intron 3 of 3)"	AluJb|SINE|Alu	94655	NM_020725	222255	Hs.745056	NM_020725	ENSG00000146776	ATXN7L1	ATXN7L4	ataxin 7 like 1	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr7-566	chr7	105519105	105520622	+	28.2	1517	Intergenic	MLT1F2|LTR|ERVL-MaLR	-2832	NM_152749	222255	Hs.745056	NM_020725	ENSG00000146776	ATXN7L1	ATXN7L4	ataxin 7 like 1	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr7-569	chr7	105664528	105665781	+	21.8	1253	"intron (NM_152750, intron 15 of 18)"	"intron (NM_152750, intron 15 of 18)"	61497	NM_001301161	222256	Hs.150120	NM_152750	ENSG00000128536	CDHR3	CDH28	cadherin related family member 3	protein-coding	21.76	4.37	4.979405034	1.32E-07
chr7-572	chr7	116434171	116435171	+	18.6	1000	"intron (NM_001127500, intron 19 of 20)"	"intron (NM_001127500, intron 19 of 20)"	-67892	NM_006136	830	Hs.446123	NM_006136	ENSG00000198898	CAPZA2	CAPPA2|CAPZ	capping actin protein of muscle Z-line alpha subunit 2	protein-coding	18.56	1.46	12.71232877	2.41E-11
chr7-578	chr7	131415436	131416692	+	20.5	1256	Intergenic	Intergenic	-174688	NM_001018111	5420	Hs.744213	NM_005397	ENSG00000128567	PODXL	Gp200|PC|PCLP|PCLP-1	podocalyxin like	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr7-579	chr7	131533996	131535252	+	21.8	1256	Intergenic	Intergenic	-60355	NR_110836	101928782	Hs.571369	NR_110836	ENSG00000224865	LOC101928782	-	uncharacterized LOC101928782	ncRNA	21.76	3.4	6.4	3.73E-09
chr7-580	chr7	132157296	132158725	+	23	1429	"intron (NM_001105543, intron 3 of 3)"	"intron (NM_001105543, intron 3 of 3)"	103313	NM_020911	91584	Hs.511454	NM_020911	ENSG00000221866	PLXNA4	FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003	plexin A4	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr7-581	chr7	132165963	132167418	+	20.5	1455	"intron (NM_001105543, intron 3 of 3)"	"intron (NM_001105543, intron 3 of 3)"	94633	NM_020911	91584	Hs.511454	NM_020911	ENSG00000221866	PLXNA4	FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003	plexin A4	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr7-582	chr7	132400234	132401234	+	18.6	1000	"intron (NR_046323, intron 3 of 4)"	"intron (NR_046323, intron 3 of 4)"	-42996	NR_134332	100506937	Hs.98247	NR_134332	ENSG00000225881	LOC100506937	-	uncharacterized LOC100506937	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr7-583	chr7	132847075	132848075	+	17.3	1000	Intergenic	Intergenic	-54304	NR_133931	105375512	Hs.521205	NR_133931		LOC105375512	-	uncharacterized LOC105375512	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr7-584	chr7	135477686	135478940	+	20.5	1254	Intergenic	L2c|LINE|L2	-44719	NM_205855	389558	Hs.55200	NM_205855	ENSG00000189320	FAM180A	UNQ1940	family with sequence similarity 180 member A	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr7-586	chr7	135751972	135752972	+	17.9	1000	Intergenic	Intergenic	-90268	NM_001128619	767558	Hs.602015	NM_001128619	ENSG00000267697	LUZP6	MPD6|MTPNUT	leucine zipper protein 6	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr7-59	chr7	141006688	141007943	+	26.9	1255	"intron (NM_001195278, intron 2 of 3)"	"intron (NM_001195278, intron 2 of 3)"	233283	NM_001195278	100507421	Hs.283851	NM_001195278	ENSG00000261115	TMEM178B	-	transmembrane protein 178B	protein-coding	26.88	4.85	5.542268041	7.61E-10
chr7-607	chr7	151264485	151266739	+	44.2	2254	"intron (NM_016203, intron 11 of 15)"	"intron (NM_016203, intron 11 of 15)"	-48602	NM_005614	6009	Hs.283521	NM_005614	ENSG00000106615	RHEB	RHEB2	Ras homolog enriched in brain	protein-coding	44.17	6.31	7	1.02E-17
chr7-609	chr7	151325087	151328039	+	41.6	2952	"intron (NM_016203, intron 5 of 15)"	"intron (NM_016203, intron 5 of 15)"	2781	NM_024429	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	41.61	5.82	7.149484536	5.30E-17
chr7-610	chr7	151417655	151422019	+	64	4364	"intron (NM_016203, intron 3 of 15)"	"intron (NM_016203, intron 3 of 15)"	13563	NM_001304527	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	64.01	14.56	4.396291209	3.04E-17
chr7-615	chr7	154539980	154542691	+	41.6	2711	"intron (NM_001936, intron 8 of 25)"	"intron (NM_001936, intron 8 of 25)"	-178892	NR_024477	100132707	Hs.586358	NR_024476	ENSG00000214106	PAXIP1-AS2	PAXIP1OS	PAXIP1 antisense RNA 2	ncRNA	41.61	5.82	7.149484536	5.30E-17
chr7-619	chr7	155021870	155023205	+	23.7	1335	Intergenic	AluSx|SINE|Alu	-66945	NM_001346590	3638	Hs.520819	NM_005542	ENSG00000186480	INSIG1	CL6	insulin induced gene 1	protein-coding	23.68	5.34	4.434456929	4.49E-07
chr7-620	chr7	155024912	155027478	+	53.8	2566	Intergenic	Intergenic	-63287	NM_001346590	3638	Hs.520819	NM_005542	ENSG00000186480	INSIG1	CL6	insulin induced gene 1	protein-coding	53.77	11.65	4.615450644	1.91E-15
chr7-621	chr7	155183444	155189603	+	99.9	6159	Intergenic	AluSc8|SINE|Alu	-25895	NR_103545	338436	Hs.521326	NR_103545	ENSG00000204960	BLACE	-	B-cell acute lymphoblastic leukemia expressed	ncRNA	99.85	15.53	6.429491307	1.99E-36
chr7-625	chr7	155265537	155266537	+	16.6	1000	Intergenic	Intergenic	15213	NM_001427	2020	Hs.134989	NM_001427	ENSG00000164778	EN2	-	engrailed homeobox 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr7-638	chr7	155690438	155692141	+	29.4	1703	Intergenic	AluSx|SINE|Alu	-62624	NR_144629	389602	Hs.583071	NM_001291913		LOC389602	-	uncharacterized LOC389602	protein-coding	29.44	2.43	12.11522634	1.54E-17
chr7-64	chr7	157306419	157307721	+	27.5	1302	Intergenic	Intergenic	48145	NR_110157	101927914	Hs.623826	NR_110157	ENSG00000234210	LOC101927914	-	uncharacterized LOC101927914	ncRNA	27.52	2.91	9.457044674	7.03E-14
chr7-647	chr7	156248124	156249124	+	17.9	1000	Intergenic	Intergenic	-10342	NR_038232	285889	Hs.407095	NR_038232	ENSG00000233878	LOC285889	-	uncharacterized LOC285889	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr7-648	chr7	156341404	156342404	+	17.9	1000	"intron (NR_103858, intron 1 of 1)"	"intron (NR_103858, intron 1 of 1)"	8719	NR_024119	64433	Hs.404170	NR_024119	ENSG00000279418	LINC00244	C7orf4|NCRNA00244	long intergenic non-protein coding RNA 244	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr7-651	chr7	156412953	156414213	+	22.4	1260	Intergenic	Intergenic	-17694	NR_103858	100506380	Hs.721001	NR_103858	ENSG00000182648	LINC01006	C7orf13|MY040	long intergenic non-protein coding RNA 1006	ncRNA	22.4	2.91	7.697594502	3.87E-10
chr7-653	chr7	158239840	158240840	+	18.6	1000	"intron (NM_130842, intron 1 of 21)"	"intron (NM_130842, intron 1 of 21)"	85165	NR_030325	693180		NR_030325	ENSG00000207637	MIR595	MIRN595|hsa-mir-595	microRNA 595	ncRNA	18.56	4.37	4.247139588	1.41E-05
chr7-654	chr7	158294214	158295214	+	17.9	1000	"intron (NM_130843, intron 1 of 21)"	L3|LINE|CR1	30791	NR_030325	693180		NR_030325	ENSG00000207637	MIR595	MIRN595|hsa-mir-595	microRNA 595	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr7-66	chr7	557203	565148	+	147.2	7945	"non-coding (NR_033963, exon 1 of 3)"	"non-coding (NR_033963, exon 1 of 3)"	1147	NR_033963	441307	Hs.521334	NR_033963	ENSG00000223855	HRAT92	-	heart tissue-associated transcript 92	ncRNA	147.22	11.16	13.19175627	8.78E-85
chr7-660	chr7	83808	86269	+	34.6	2461	Intergenic	Tigger7|DNA|TcMar-Tigger	64400	NR_134325	102723672	Hs.605204	NR_134325		LOC102723672	-	uncharacterized LOC102723672	ncRNA	34.56	7.77	4.447876448	3.74E-10
chr7-674	chr7	1462470	1463470	+	17.9	1000	Intergenic	Intergenic	36139	NM_182924	79778	Hs.376617	NM_024723	ENSG00000164877	MICALL2	JRAB|MICAL-L2	MICAL like 2	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr7-677	chr7	3211162	3212162	+	17.9	1000	Intergenic	Intergenic	-13456	NR_126024	100129603	Hs.652997	NR_126024		LOC100129603	-	uncharacterized LOC100129603	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr7-678	chr7	3243334	3244334	+	17.9	1000	Intergenic	AluSx|SINE|Alu	-45628	NR_126024	100129603	Hs.652997	NR_126024		LOC100129603	-	uncharacterized LOC100129603	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr7-680	chr7	3399844	3400844	+	17.9	1000	"intron (NM_152744, intron 1 of 44)"	"intron (NM_152744, intron 1 of 44)"	59264	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr7-681	chr7	3413118	3414462	+	21.8	1344	"intron (NM_152744, intron 1 of 44)"	"intron (NM_152744, intron 1 of 44)"	72710	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr7-682	chr7	3538502	3539502	+	17.3	1000	"intron (NM_152744, intron 1 of 44)"	L1ME3D|LINE|L1	197922	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr7-683	chr7	3995966	3996966	+	17.9	1000	"intron (NM_152744, intron 7 of 44)"	"intron (NM_152744, intron 7 of 44)"	-172851	NM_001079653	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding	17.92	0.49	36.57142857	9.96E-18
chr7-687	chr7	21292462	21293714	+	21.8	1252	Intergenic	Intergenic	-174564	NM_001326543	6671	Hs.88013	NM_003112	ENSG00000105866	SP4	HF1B|SPR-1	Sp4 transcription factor	protein-coding	21.76	3.4	6.4	3.73E-09
chr7-688	chr7	24278784	24279784	+	16.6	1000	Intergenic	Intergenic	-44523	NM_000905	4852	Hs.1832	NM_000905	ENSG00000122585	NPY	PYY4	neuropeptide Y	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr7-690	chr7	25708604	25709604	+	16.6	1000	Intergenic	Eulor9B|DNA|DNA	280502	NR_029597	406940		NR_029597	ENSG00000199085	MIR148A	MIRN148|MIRN148A|hsa-mir-148|mir-148a	microRNA 148a	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr7-693	chr7	26489634	26490634	+	17.3	1000	"intron (NR_015364, intron 1 of 4)"	"intron (NR_015364, intron 1 of 4)"	47026	NR_015364	441204	Hs.587432	NR_015364		LOC441204	-	uncharacterized LOC441204	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr7-696	chr7	28523774	28524774	+	17.9	1000	"intron (NM_004904, intron 1 of 10)"	"intron (NM_004904, intron 1 of 10)"	49040	NM_004904	9586	Hs.437075	NM_004904	ENSG00000146592	CREB5	CRE-BPA|CREB-5	cAMP responsive element binding protein 5	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr7-70	chr7	33943821	33945146	+	25.6	1325	promoter-TSS (NM_133468)	promoter-TSS (NM_133468)	-40	NM_133468	168667	Hs.660998	NM_133468	ENSG00000164619	BMPER	CRIM3|CV-2|CV2	BMP binding endothelial regulator	protein-coding	25.6	5.34	4.794007491	2.00E-08
chr7-702	chr7	39032398	39033398	+	16.6	1000	"intron (NR_138047, intron 3 of 6)"	"intron (NR_138047, intron 3 of 6)"	15289	NM_001166018	11281	Hs.137106	NM_007252	ENSG00000106536	POU6F2	RPF-1|WT5|WTSL	POU class 6 homeobox 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr7-703	chr7	39197254	39198254	+	17.3	1000	"intron (NM_001166018, intron 3 of 10)"	MIR|SINE|MIR	-144587	NR_138047	100689074	Hs.675876	NR_138047		POU6F2-AS2	-	POU6F2 antisense RNA 2	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr7-704	chr7	42888466	42889466	+	16.6	1000	Intergenic	L1MA9|LINE|L1	62723	NM_001099858	79020	Hs.698120	NM_024054	ENSG00000136197	C7orf25	-	chromosome 7 open reading frame 25	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr7-71	chr7	45245965	45247319	+	27.5	1354	Intergenic	L1M4b|LINE|L1	49275	NM_005856	10268	Hs.25691	NM_005856	ENSG00000122679	RAMP3	-	receptor activity modifying protein 3	protein-coding	27.52	6.31	4.36133122	6.42E-08
chr7-710	chr7	45464037	45465037	+	17.9	1000	Intergenic	Intergenic	-149202	NM_001281768	107	Hs.192215	NM_021116	ENSG00000164742	ADCY1	AC1|DFNB44	adenylate cyclase 1	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr7-711	chr7	47610438	47611988	+	21.1	1550	"intron (NM_022748, intron 1 of 30)"	"intron (NM_022748, intron 1 of 30)"	10529	NM_022748	64759	Hs.520814	NM_022748	ENSG00000136205	TNS3	TEM6|TENS1	tensin 3	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr7-712	chr7	47881597	47882597	+	16.6	1000	"intron (NM_138295, intron 34 of 56)"	"intron (NM_138295, intron 34 of 56)"	47208	NM_001302627	80099	Hs.287647	NM_025031		C7orf69	-	chromosome 7 open reading frame 69	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr7-713	chr7	55183583	55184583	+	16	1000	"intron (NM_001346900, intron 1 of 27)"	"intron (NM_001346900, intron 1 of 27)"	6573	NM_001346900	1956	Hs.488293	NM_005228	ENSG00000146648	EGFR	ERBB|ERBB1|HER1|NISBD2|PIG61|mENA	epidermal growth factor receptor	protein-coding	16	2.91	5.498281787	4.98E-06
chr7-715	chr7	69764132	69765132	+	16.6	1000	"intron (NM_015570, intron 4 of 18)"	"intron (NM_015570, intron 4 of 18)"	700727	NM_001127231	26053	Hs.21631	NM_015570	ENSG00000158321	AUTS2	FBRSL2|MRD26	autism susceptibility candidate 2	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr7-718	chr7	77641626	77642626	+	17.9	1000	Intergenic	Intergenic	172679	NM_001127357	57157	Hs.203965	NM_020432	ENSG00000006576	PHTF2	-	putative homeodomain transcription factor 2	protein-coding	17.92	0	18.4597065	9.96E-18
chr7-721	chr7	80547622	80549228	+	28.2	1606	"5' UTR (NM_006379, exon 1 of 18)"	"5' UTR (NM_006379, exon 1 of 18)"	242	NM_006379	10512	Hs.269109	NM_006379	ENSG00000075223	SEMA3C	SEMAE|SemE	semaphorin 3C	protein-coding	28.16	3.88	7.257731959	1.97E-12
chr7-722	chr7	90763351	90764351	+	17.9	1000	"intron (NM_001287137, intron 12 of 12)"	"intron (NM_001287137, intron 12 of 12)"	-129932	NM_003505	8321	Hs.94234	NM_003505	ENSG00000157240	FZD1	-	frizzled class receptor 1	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr7-723	chr7	90791618	90792618	+	17.3	1000	"intron (NM_001287137, intron 12 of 12)"	MIR|SINE|MIR	-101665	NM_003505	8321	Hs.94234	NM_003505	ENSG00000157240	FZD1	-	frizzled class receptor 1	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr7-725	chr7	96643156	96644156	+	17.9	1000	promoter-TSS (NR_015448)	promoter-TSS (NR_015448)	-279	NR_015448	285987	Hs.34969	NR_015448		DLX6-AS1	DLX6-AS|DLX6AS|Evf-2|NCRNA00212	DLX6 antisense RNA 1	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr7-727	chr7	100365765	100366765	+	17.3	1000	"exon (NM_173059, exon 27 of 47)"	"exon (NM_173059, exon 27 of 47)"	35016	NR_111917	7455	Hs.307004	NM_003386	ENSG00000146839	ZAN	-	zonadhesin (gene/pseudogene)	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr7-731	chr7	104538654	104539654	+	17.3	1000	"intron (NR_027374, intron 3 of 3)"	FRAM|SINE|Alu	27938	NR_027374	723809	Hs.124316	NR_027374	ENSG00000225329	LHFPL3-AS2	-	LHFPL3 antisense RNA 2	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr7-732	chr7	105406511	105407511	+	17.3	1000	"intron (NM_152749, intron 3 of 3)"	"intron (NM_152749, intron 3 of 3)"	-87363	NM_001318229	222255	Hs.745056	NM_020725	ENSG00000146776	ATXN7L1	ATXN7L4	ataxin 7 like 1	protein-coding	17.28	1.46	11.83561644	2.99E-10
chr7-734	chr7	105659895	105660895	+	17.9	1000	"intron (NM_152750, intron 12 of 18)"	"intron (NM_152750, intron 12 of 18)"	56738	NM_001301161	222256	Hs.150120	NM_152750	ENSG00000128536	CDHR3	CDH28	cadherin related family member 3	protein-coding	17.92	1.46	12.2739726	2.41E-11
chr7-735	chr7	107767315	107768567	+	21.8	1252	"intron (NM_007356, intron 1 of 33)"	MER81|DNA|hAT-Blackjack	2860	NM_001318046	22798	Hs.62022	NM_007356	ENSG00000091128	LAMB4	-	laminin subunit beta 4	protein-coding	21.76	4.37	4.979405034	1.32E-07
chr7-738	chr7	126855890	126856890	+	16	1000	"intron (NR_110195, intron 1 of 1)"	AluSc8|SINE|Alu	1209	NR_110195	101928333	Hs.551332	NR_110194	ENSG00000236340	LOC101928333	-	uncharacterized LOC101928333	ncRNA	16	1.94	8.24742268	7.67E-08
chr7-739	chr7	127257846	127258846	+	17.9	1000	Intergenic	Intergenic	-2566	NM_006193	5078	Hs.129706	NM_006193	ENSG00000106331	PAX4	KPD|MODY9	paired box 4	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr7-740	chr7	127278828	127279828	+	17.3	1000	Intergenic	Intergenic	-12715	NM_014390	27044	Hs.122523	NM_014390	ENSG00000197157	SND1	TDRD11|Tudor-SN|p100	staphylococcal nuclease and tudor domain containing 1	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr7-741	chr7	127882221	127883472	+	19.8	1251	"intron (NM_000230, intron 1 of 2)"	"intron (NM_000230, intron 1 of 2)"	1515	NM_000230	3952	Hs.194236	NM_000230	ENSG00000174697	LEP	LEPD|OB|OBS	leptin	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr7-742	chr7	128048161	128052067	+	59.5	3906	promoter-TSS (NM_000883)	promoter-TSS (NM_000883)	-73	NM_001304521	3614	Hs.654401	NM_000883	ENSG00000106348	IMPDH1	IMPD|IMPD1|IMPDH-I|LCA11|RP10|sWSS2608	inosine monophosphate dehydrogenase 1	protein-coding	59.53	7.77	7.661518662	5.01E-25
chr7-744	chr7	128827965	128830065	+	35.2	2100	"exon (NM_005631, exon 1 of 12)"	"exon (NM_005631, exon 1 of 12)"	302	NM_005631	6608	Hs.437846	NM_005631	ENSG00000128602	SMO	CRJS|FZD11|Gx|SMOH	"smoothened, frizzled class receptor"	protein-coding	35.2	1.94	18.1443299	1.63E-24
chr7-746	chr7	129425320	129428251	+	49.3	2931	Intergenic	Intergenic	-11931	NR_029615	406959		NR_029615	ENSG00000207691	MIR183	MIRN183|miR-183|miRNA183	microRNA 183	ncRNA	49.29	7.77	6.343629344	2.96E-18
chr7-747	chr7	130418245	130420735	+	42.2	2490	promoter-TSS (NM_138693)	promoter-TSS (NM_138693)	-630	NM_138693	136259	Hs.125240	NM_138693	ENSG00000266265	KLF14	BTEB5	Kruppel like factor 14	protein-coding	42.25	5.34	7.911985019	5.94E-19
chr7-749	chr7	131384355	131385355	+	17.9	1000	Intergenic	Intergenic	-143479	NM_001018111	5420	Hs.744213	NM_005397	ENSG00000128567	PODXL	Gp200|PC|PCLP|PCLP-1	podocalyxin like	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr7-750	chr7	131403534	131404902	+	19.2	1368	Intergenic	Intergenic	-162842	NM_001018111	5420	Hs.744213	NM_005397	ENSG00000128567	PODXL	Gp200|PC|PCLP|PCLP-1	podocalyxin like	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr7-752	chr7	132180670	132181670	+	16.6	1000	"intron (NM_001105543, intron 2 of 3)"	"intron (NM_001105543, intron 2 of 3)"	80153	NM_020911	91584	Hs.511454	NM_020911	ENSG00000221866	PLXNA4	FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003	plexin A4	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr7-753	chr7	132262226	132263488	+	21.8	1262	"intron (NM_181775, intron 2 of 4)"	"intron (NM_181775, intron 2 of 4)"	-1534	NM_001105543	91584	Hs.511454	NM_020911	ENSG00000221866	PLXNA4	FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003	plexin A4	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr7-755	chr7	133891941	133892941	+	17.9	1000	"intron (NM_144648, intron 15 of 19)"	"intron (NM_144648, intron 15 of 19)"	80336	NM_144648	136332	Hs.149774	NM_144648	ENSG00000155530	LRGUK	CFAP246	leucine rich repeats and guanylate kinase domain containing	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr7-758	chr7	137684682	137685682	+	20.5	1000	"intron (NM_194071, intron 1 of 11)"	"intron (NM_194071, intron 1 of 11)"	1665	NM_194071	64764	Hs.490273	NM_194071	ENSG00000182158	CREB3L2	BBF2H7	cAMP responsive element binding protein 3 like 2	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr7-759	chr7	138494012	138495012	+	16	1000	Intergenic	Intergenic	-11571	NM_130840	50617	Hs.98967	NM_020632	ENSG00000105929	ATP6V0A4	A4|ATP6N1B|ATP6N2|RDRTA2|RTA1C|RTADR|STV1|VPH1|VPP2	ATPase H+ transporting V0 subunit a4	protein-coding	16	1.94	8.24742268	7.67E-08
chr7-765	chr7	141095758	141097017	+	19.8	1259	"intron (NM_001195278, intron 2 of 3)"	"intron (NM_001195278, intron 2 of 3)"	-154691	NM_018238	55750	Hs.743318	NM_018238	ENSG00000006530	AGK	CATC5|CTRCT38|MTDPS10|MULK	acylglycerol kinase	protein-coding	19.84	0	20.43753219	2.52E-19
chr7-766	chr7	141201952	141202952	+	17.9	1000	Intergenic	AluSp|SINE|Alu	-48626	NM_018238	55750	Hs.743318	NM_018238	ENSG00000006530	AGK	CATC5|CTRCT38|MTDPS10|MULK	acylglycerol kinase	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr7-770	chr7	148034026	148038347	+	69.8	4321	"intron (NR_036093, intron 3 of 3)"	"intron (NR_036093, intron 3 of 3)"	-251471	NM_145304	202865	Hs.352212	NM_145304	ENSG00000170279	C7orf33	-	chromosome 7 open reading frame 33	protein-coding	69.77	10.68	6.532771536	6.80E-26
chr7-771	chr7	148315670	148318776	+	46.1	3106	Intergenic	AluSg7|SINE|Alu	29566	NM_145304	202865	Hs.352212	NM_145304	ENSG00000170279	C7orf33	-	chromosome 7 open reading frame 33	protein-coding	46.09	9.71	4.746652935	8.12E-14
chr7-773	chr7	149513919	149518428	+	65.3	4509	"intron (NM_198455, intron 83 of 109)"	MIRb|SINE|MIR	-19283	NM_001099220	643641	Hs.731923	NM_001099220	ENSG00000106479	ZNF862	-	zinc finger protein 862	protein-coding	65.29	7.77	8.402831403	1.44E-29
chr7-775	chr7	150481259	150482590	+	23	1331	Intergenic	Intergenic	15697	NM_001101314	28959	Hs.647090	NM_014020	ENSG00000106565	TMEM176B	LR8|MS4B2	transmembrane protein 176B	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr7-776	chr7	150488895	150489895	+	17.3	1000	"intron (NM_014020, intron 5 of 6)"	MLT1G1|LTR|ERVL-MaLR	8226	NM_001101314	28959	Hs.647090	NM_014020	ENSG00000106565	TMEM176B	LR8|MS4B2	transmembrane protein 176B	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr7-777	chr7	150491828	150493084	+	19.8	1256	"intron (NM_014020, intron 2 of 6)"	"intron (NM_014020, intron 2 of 6)"	5165	NM_001101314	28959	Hs.647090	NM_014020	ENSG00000106565	TMEM176B	LR8|MS4B2	transmembrane protein 176B	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr7-781	chr7	150799557	150800557	+	16.6	1000	"intron (NM_001042535, intron 1 of 8)"	AluJb|SINE|Alu	-11708	NM_001308305	116988	Hs.647075	NM_031946	ENSG00000133612	AGAP3	AGAP-3|CENTG3|CRAG|MRIP-1|cnt-g3	"ArfGAP with GTPase domain, ankyrin repeat and PH domain 3"	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr7-788	chr7	150971652	150972902	+	19.2	1250	"5' UTR (NM_003078, exon 2 of 14)"	"5' UTR (NM_003078, exon 2 of 14)"	1543	NM_001003802	6604	Hs.647067	NM_003078	ENSG00000082014	SMARCD3	BAF60C|CRACD3|Rsc6p	"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3"	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr7-799	chr7	154586741	154587741	+	17.9	1000	"intron (NM_001936, intron 11 of 25)"	"intron (NM_001936, intron 11 of 25)"	-132986	NR_024477	100132707	Hs.586358	NR_024476	ENSG00000214106	PAXIP1-AS2	PAXIP1OS	PAXIP1 antisense RNA 2	ncRNA	17.92	3.4	5.270588235	8.42E-07
chr7-805	chr7	154959012	154960403	+	23	1391	Intergenic	Intergenic	-96440	NR_038945	100128264	Hs.248137	NR_038945	ENSG00000220575	HTR5A-AS1	HTR5AOS	HTR5A antisense RNA 1	ncRNA	23.04	3.4	6.776470588	5.45E-10
chr7-808	chr7	155052037	155053037	+	16	1000	Intergenic	MLT1A-int|LTR|ERVL-MaLR	-36945	NM_001346590	3638	Hs.520819	NM_005542	ENSG00000186480	INSIG1	CL6	insulin induced gene 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr7-822	chr7	155747021	155748021	+	16.6	1000	Intergenic	Intergenic	-6392	NR_144629	389602	Hs.583071	NM_001291913		LOC389602	-	uncharacterized LOC389602	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr7-825	chr7	155816043	155817323	+	20.5	1280	Intergenic	Intergenic	61357	NM_001291913	389602	Hs.583071	NM_001291913		LOC389602	-	uncharacterized LOC389602	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr7-828	chr7	156366117	156367117	+	17.9	1000	"intron (NR_103858, intron 1 of 1)"	L1PB|LINE|L1	29272	NR_103858	100506380	Hs.721001	NR_103858	ENSG00000182648	LINC01006	C7orf13|MY040	long intergenic non-protein coding RNA 1006	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr7-829	chr7	156404124	156405124	+	16.6	1000	Intergenic	MLT2B5|LTR|ERVL	-8735	NR_103858	100506380	Hs.721001	NR_103858	ENSG00000182648	LINC01006	C7orf13|MY040	long intergenic non-protein coding RNA 1006	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr7-830	chr7	156407269	156408788	+	27.5	1519	Intergenic	Intergenic	-12139	NR_103858	100506380	Hs.721001	NR_103858	ENSG00000182648	LINC01006	C7orf13|MY040	long intergenic non-protein coding RNA 1006	ncRNA	27.52	4.85	5.674226804	7.61E-10
chr7-839	chr7	157781679	157783692	+	30.7	2013	"intron (NM_130843, intron 10 of 21)"	"intron (NM_130843, intron 10 of 21)"	135408	NR_038966	100506585	Hs.661265	NR_038966	ENSG00000233038	LOC100506585	-	uncharacterized LOC100506585	ncRNA	30.72	1.94	15.83505155	8.26E-21
chr7-840	chr7	158905050	158906497	+	19.8	1447	"intron (NR_130758, intron 2 of 12)"	LTR2B|LTR|ERV1	-15878	NM_001308259	7434	Hs.585052	NM_003382	ENSG00000106018	VIPR2	C16DUPq36.3|DUP7q36.3|PACAP-R-3|PACAP-R3|VIP-R-2|VPAC2|VPAC2R|VPCAP2R	vasoactive intestinal peptide receptor 2	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr7-841	chr7	40899	43033	+	36.5	2134	Intergenic	LTR8A|LTR|ERV1	107472	NR_134325	102723672	Hs.605204	NR_134325		LOC102723672	-	uncharacterized LOC102723672	ncRNA	36.48	5.82	6.268041237	1.09E-13
chr7-844	chr7	173826	177754	+	57	3928	"intron (NR_134324, intron 2 of 2)"	"intron (NR_134324, intron 2 of 2)"	870	NR_134324	105375115	Hs.299538	NR_134324	ENSG00000239715	LOC105375115	-	uncharacterized LOC105375115	ncRNA	56.97	9.71	5.867147271	1.19E-19
chr7-846	chr7	379438	380438	+	16	1000	Intergenic	Intergenic	-39453	NR_033960	442497	Hs.704269	NR_033960	ENSG00000249574	LOC442497	-	uncharacterized LOC442497	ncRNA	16	0	16.4818808	1.26E-14
chr7-851	chr7	1703490	1709308	+	81.3	5818	Intergenic	CpG	-42399	NM_001128636	392617	Hs.42896	NM_001128636	ENSG00000225968	ELFN1	PPP1R28	extracellular leucine rich repeat and fibronectin type III domain containing 1	protein-coding	81.29	8.25	9.853333333	8.58E-40
chr7-852	chr7	2726344	2730047	+	74.2	3703	"intron (NM_001321766, intron 1 of 6)"	CpG	359	NM_001321766	155185	Hs.42221	NM_133463	ENSG00000174945	AMZ1	-	archaelysin family metallopeptidase 1	protein-coding	74.25	16.5	4.5	3.42E-20
chr7-855	chr7	3486470	3487470	+	16.6	1000	"intron (NM_152744, intron 1 of 44)"	"intron (NM_152744, intron 1 of 44)"	145890	NM_152744	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr7-857	chr7	3926050	3927050	+	15.4	1000	"intron (NM_152744, intron 5 of 44)"	AluJr|SINE|Alu	-242767	NM_001079653	221935	Hs.653013	NM_152744	ENSG00000146555	SDK1	-	sidekick cell adhesion molecule 1	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr7-861	chr7	5465619	5468359	+	45.4	2740	Intergenic	CpG-23978	-3812	NM_001080495	84629	Hs.520638	NM_001013722	ENSG00000182095	TNRC18	CAGL79|TNRC18A	trinucleotide repeat containing 18	protein-coding	45.45	7.28	6.243131868	1.03E-16
chr7-866	chr7	6574864	6576425	+	25.6	1561	"intron (NM_001145118, intron 2 of 21)"	"intron (NM_001145118, intron 2 of 21)"	15423	NM_001145118	392862	Hs.512174	NM_001145118	ENSG00000215045	GRID2IP	DELPHILIN	Grid2 interacting protein	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr7-869	chr7	25238761	25239761	+	17.3	1000	Intergenic	AluSx1|SINE|Alu	-19444	NM_138811	136895	Hs.122055	NM_138811	ENSG00000153790	C7orf31	-	chromosome 7 open reading frame 31	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr7-872	chr7	25390972	25392763	+	33.3	1791	Intergenic	AluSg7|SINE|Alu	-123762	NM_022150	64111	Hs.60473	NM_022150	ENSG00000105954	NPVF	C7orf9|RFRP	neuropeptide VF precursor	protein-coding	33.28	4.37	7.615560641	6.77E-15
chr7-874	chr7	25873098	25874380	+	21.1	1282	Intergenic	MLT1B|LTR|ERVL-MaLR	115867	NR_029597	406940		NR_029597	ENSG00000199085	MIR148A	MIRN148|MIRN148A|hsa-mir-148|mir-148a	microRNA 148a	ncRNA	21.12	3.88	5.443298969	1.44E-07
chr7-876	chr7	25902566	25903566	+	16.6	1000	Intergenic	Intergenic	86540	NR_029597	406940		NR_029597	ENSG00000199085	MIR148A	MIRN148|MIRN148A|hsa-mir-148|mir-148a	microRNA 148a	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr7-879	chr7	27198390	27199390	+	16	1000	Intergenic	Intergenic	-2594	NM_006896	3204	Hs.610216	NM_006896	ENSG00000122592	HOXA7	ANTP|HOX1|HOX1.1|HOX1A	homeobox A7	protein-coding	16	2.91	5.498281787	4.98E-06
chr7-887	chr7	27401316	27402651	+	19.8	1335	Intergenic	Intergenic	-115135	NR_120507	101410536	Hs.687800	NR_120507	ENSG00000253405	EVX1-AS	EVX1-AS1	EVX1 antisense RNA	ncRNA	19.84	1.94	10.22680412	9.57E-11
chr7-889	chr7	28456053	28457493	+	25	1440	"intron (NM_182898, intron 1 of 10)"	MER33|DNA|hAT-Charlie	4629	NM_182898	9586	Hs.437075	NM_004904	ENSG00000146592	CREB5	CRE-BPA|CREB-5	cAMP responsive element binding protein 5	protein-coding	24.96	3.4	7.341176471	7.55E-11
chr7-890	chr7	28475666	28476666	+	16	1000	"intron (NM_004904, intron 1 of 10)"	"intron (NM_004904, intron 1 of 10)"	932	NM_004904	9586	Hs.437075	NM_004904	ENSG00000146592	CREB5	CRE-BPA|CREB-5	cAMP responsive element binding protein 5	protein-coding	16	0.97	16.49484536	3.54E-11
chr7-892	chr7	28661996	28662996	+	17.3	1000	"intron (NM_182899, intron 4 of 9)"	AT_rich|Low_complexity|Low_complexity	-63102	NM_001011666	9586	Hs.437075	NM_004904	ENSG00000146592	CREB5	CRE-BPA|CREB-5	cAMP responsive element binding protein 5	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr7-895	chr7	29910407	29911407	+	17.3	1000	"intron (NM_001080529, intron 2 of 8)"	"intron (NM_001080529, intron 2 of 8)"	64737	NM_001080529	644150	Hs.380698	NM_001080529	ENSG00000122574	WIPF3	CR16	WAS/WASL interacting protein family member 3	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr7-900	chr7	35288481	35289740	+	22.4	1259	"intron (NM_001077653, intron 2 of 7)"	"intron (NM_001077653, intron 2 of 7)"	4601	NM_001166220	57057	Hs.404167	NM_020417	ENSG00000164532	TBX20	ASD4	T-box 20	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr7-903	chr7	35602257	35603257	+	16.6	1000	Intergenic	L1MD|LINE|L1	132015	NM_022373	64224	Hs.643051	NM_022373	ENSG00000122557	HERPUD2	-	HERPUD family member 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr7-904	chr7	36021990	36022990	+	17.3	1000	Intergenic	CpG	-112430	NR_108089	101928618	Hs.561704	NR_108089	ENSG00000261184	LOC101928618	-	uncharacterized LOC101928618	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr7-906	chr7	37933146	37934146	+	16	1000	"intron (NM_016616, intron 15 of 17)"	"intron (NM_016616, intron 15 of 17)"	22879	NM_003014	6424	Hs.658169	NM_003014	ENSG00000106483	SFRP4	FRP-4|FRPHE|PYL|sFRP-4	secreted frizzled related protein 4	protein-coding	16	3.88	4.12371134	7.91E-05
chr7-909	chr7	44173371	44174371	+	16.6	1000	Intergenic	Intergenic	7045	NM_021223	58498	Hs.75636	NM_021223	ENSG00000106631	MYL7	MYL2A|MYLC2A	myosin light chain 7	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr7-910	chr7	47445075	47446688	+	25	1613	"intron (NM_022748, intron 13 of 30)"	"intron (NM_022748, intron 13 of 30)"	175861	NM_022748	64759	Hs.520814	NM_022748	ENSG00000136205	TNS3	TEM6|TENS1	tensin 3	protein-coding	24.96	3.4	7.341176471	7.55E-11
chr7-911	chr7	47924052	47925589	+	28.8	1537	"intron (NM_138295, intron 18 of 56)"	"intron (NM_138295, intron 18 of 56)"	63251	NM_138295	168507	Hs.195979	NM_138295	ENSG00000158683	PKD1L1	HTX8|PRO19563	"polycystin 1 like 1, transient receptor potential channel interacting"	protein-coding	28.8	2.91	9.896907216	7.24E-15
chr7-912	chr7	49032140	49033140	+	16.6	1000	Intergenic	MER89-int|LTR|ERV1	68483	NR_003595	168448	Hs.567757	NM_152627		CDC14C	CDC14B2|CDC14Bretro|CDC14CP	"cell division cycle 14C, pseuodgene"	pseudo	16.64	1.46	11.39726027	2.99E-10
chr7-919	chr7	73415037	73416037	+	16	1000	Intergenic	Intergenic	-26582	NM_001278914	2006	Hs.647061	NM_000501	ENSG00000049540	ELN	SVAS|WBS|WS	elastin	protein-coding	16	2.43	6.58436214	7.90E-07
chr7-920	chr7	73447167	73448167	+	17.3	1000	"intron (NM_001278939, intron 1 of 33)"	G-rich|Low_complexity|Low_complexity	5548	NM_001278915	2006	Hs.647061	NM_000501	ENSG00000049540	ELN	SVAS|WBS|WS	elastin	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr7-923	chr7	91165449	91166449	+	16.6	1000	Intergenic	Intergenic	272166	NM_003505	8321	Hs.94234	NM_003505	ENSG00000157240	FZD1	-	frizzled class receptor 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr7-924	chr7	94048896	94049896	+	16	1000	"intron (NM_000089, intron 34 of 51)"	"intron (NM_000089, intron 34 of 51)"	25523	NM_000089	1278	Hs.489142	NM_000089	ENSG00000164692	COL1A2	OI4	collagen type I alpha 2 chain	protein-coding	16	2.91	5.498281787	4.98E-06
chr7-928	chr7	98452202	98453202	+	16.6	1000	"intron (NM_152913, intron 5 of 7)"	"intron (NM_152913, intron 5 of 7)"	14971	NM_001134451	222865	Hs.270753	NM_152913	ENSG00000166448	TMEM130	-	transmembrane protein 130	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr7-929	chr7	99377461	99378461	+	16.6	1000	"intron (NM_017460, intron 1 of 12)"	"intron (NM_017460, intron 1 of 12)"	3850	NM_017460	1576	Hs.728751	NM_017460	ENSG00000160868	CYP3A4	CP33|CP34|CYP3A|CYP3A3|CYPIIIA3|CYPIIIA4|HLP|NF-25|P450C3|P450PCN1	cytochrome P450 family 3 subfamily A member 4	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr7-931	chr7	100425621	100426621	+	15.4	1000	promoter-TSS (NM_004444)	promoter-TSS (NM_004444)	-978	NM_004444	2050	Hs.437008	NM_004444	ENSG00000196411	EPHB4	HTK|MYK1|TYRO11	EPH receptor B4	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr7-933	chr7	100615033	100616033	+	16	1000	"intron (NM_001164462, intron 1 of 11)"	MIRc|SINE|MIR	2629	NM_001164462	10071	Hs.489355	NM_001164462	ENSG00000205277	MUC12	MUC-11|MUC-12|MUC11	"mucin 12, cell surface associated"	protein-coding	16	3.4	4.705882353	2.25E-05
chr7-936	chr7	100712785	100713785	+	16	1000	Intergenic	Intergenic	-15435	NM_030961	81844	Hs.521092	NM_030961	ENSG00000169871	TRIM56	RNF109	tripartite motif containing 56	protein-coding	16	1.94	8.24742268	7.67E-08
chr7-937	chr7	105363952	105364952	+	16.6	1000	"intron (NM_020725, intron 3 of 11)"	"intron (NM_020725, intron 3 of 11)"	-44804	NM_001318229	222255	Hs.745056	NM_020725	ENSG00000146776	ATXN7L1	ATXN7L4	ataxin 7 like 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr7-939	chr7	105650479	105651874	+	22.4	1395	"intron (NM_152750, intron 8 of 18)"	LTR16B2|LTR|ERVL	47519	NM_001301161	222256	Hs.150120	NM_152750	ENSG00000128536	CDHR3	CDH28	cadherin related family member 3	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr7-943	chr7	106031739	106032739	+	16.6	1000	Intergenic	MLT1J1-int|LTR|ERVL-MaLR	-106601	NM_005746	10135	Hs.489615	NM_005746	ENSG00000105835	NAMPT	1110035O14Rik|PBEF|PBEF1|VF|VISFATIN	nicotinamide phosphoribosyltransferase	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr7-945	chr7	123508079	123510450	+	32	2371	"exon (NM_012269, exon 3 of 5)"	"exon (NM_012269, exon 3 of 5)"	24041	NM_012269	23553	Hs.28673	NM_012269	ENSG00000106302	HYAL4	CSHY	hyaluronoglucosaminidase 4	protein-coding	32	3.4	9.411764706	2.00E-16
chr7-947	chr7	126892193	126894095	+	36.5	1902	promoter-TSS (NM_001127323)	promoter-TSS (NM_001127323)	-716	NM_001127323	2918	Hs.449625	NM_000845	ENSG00000179603	GRM8	GLUR8|GPRC1H|MGLUR8|mGlu8	glutamate metabotropic receptor 8	protein-coding	36.48	6.8	5.364705882	3.95E-12
chr7-950	chr7	128377322	128378322	+	16.6	1000	Intergenic	AluJr|SINE|Alu	-1524	NM_001199672	813	Hs.7753	NM_001219	ENSG00000128595	CALU	-	calumenin	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr7-951	chr7	128558262	128559262	+	15.4	1000	Intergenic	Intergenic	-7989	NM_199349	375616	Hs.371746	NM_199349	ENSG00000135253	KCP	CRIM2|KCP1|NET67	kielin/chordin-like protein	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr7-953	chr7	128809323	128810620	+	22.4	1297	TTS (NM_178562)	TTS (NM_178562)	-18742	NM_005631	6608	Hs.437846	NM_005631	ENSG00000128602	SMO	CRJS|FZD11|Gx|SMOH	"smoothened, frizzled class receptor"	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr7-956	chr7	131239062	131241395	+	39.7	2333	"intron (NM_001018111, intron 1 of 8)"	"intron (NM_001018111, intron 1 of 8)"	1148	NM_005397	5420	Hs.744213	NM_005397	ENSG00000128567	PODXL	Gp200|PC|PCLP|PCLP-1	podocalyxin like	protein-coding	39.69	6.31	6.290015848	3.11E-15
chr7-958	chr7	131483987	131484987	+	16	1000	Intergenic	MIRb|SINE|MIR	-110492	NR_110836	101928782	Hs.571369	NR_110836	ENSG00000224865	LOC101928782	-	uncharacterized LOC101928782	ncRNA	16	3.88	4.12371134	7.91E-05
chr7-959	chr7	132252952	132254209	+	20.5	1257	"intron (NM_181775, intron 2 of 4)"	"intron (NM_181775, intron 2 of 4)"	7743	NM_020911	91584	Hs.511454	NM_020911	ENSG00000221866	PLXNA4	FAYV2820|PLEXA4|PLXNA4A|PLXNA4B|PRO34003	plexin A4	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr7-962	chr7	138302871	138303871	+	17.3	1000	"intron (NM_001331192, intron 11 of 12)"	AluSx1|SINE|Alu	45598	NM_001331192	136306	Hs.99414	NM_174959	ENSG00000157703	SVOPL	-	SVOP like	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr7-964	chr7	138606096	138607096	+	16.6	1000	"intron (NM_020910, intron 1 of 19)"	AluSg|SINE|Alu	59468	NM_020910	57670	Hs.605380	NM_020910	ENSG00000122778	KIAA1549	-	KIAA1549	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr7-965	chr7	138664204	138669965	+	103.1	5761	Intergenic	Intergenic	-1020	NM_001164665	57670	Hs.605380	NM_020910	ENSG00000122778	KIAA1549	-	KIAA1549	protein-coding	103.05	16.5	6.245454545	2.79E-36
chr7-967	chr7	140245078	140246344	+	19.2	1266	"intron (NM_015689, intron 13 of 19)"	"intron (NM_015689, intron 13 of 19)"	56631	NR_134477	27147	Hs.6385	NM_015689	ENSG00000146966	DENND2A	FAM31D|KIAA1277	DENN domain containing 2A	protein-coding	19.2	1.46	13.15068493	1.82E-12
chr7-971	chr7	143043614	143044898	+	21.1	1284	"intron (NR_046453, intron 19 of 21)"	"intron (NR_046453, intron 19 of 21)"	14917	NM_014690	9715	Hs.648908	NM_014690	ENSG00000159784	FAM131B	-	family with sequence similarity 131 member B	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr7-975	chr7	148092950	148093950	+	14.7	1000	"intron (NM_014141, intron 22 of 23)"	"intron (NM_014141, intron 22 of 23)"	-194207	NM_145304	202865	Hs.352212	NM_145304	ENSG00000170279	C7orf33	-	chromosome 7 open reading frame 33	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr7-976	chr7	148312447	148313447	+	16	1000	TTS (NM_145304)	TTS (NM_145304)	25290	NM_145304	202865	Hs.352212	NM_145304	ENSG00000170279	C7orf33	-	chromosome 7 open reading frame 33	protein-coding	16	0.97	16.49484536	3.54E-11
chr7-984	chr7	150538407	150539875	+	21.1	1468	Intergenic	L1M1|LINE|L1	-10424	NM_001272072	26	Hs.647097	NM_001091	ENSG00000002726	AOC1	ABP|ABP1|DAO|DAO1|KAO	"amine oxidase, copper containing 1"	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr7-987	chr7	150593110	150595198	+	30.1	2088	Intergenic	Intergenic	44589	NM_001091	26	Hs.647097	NM_001091	ENSG00000002726	AOC1	ABP|ABP1|DAO|DAO1|KAO	"amine oxidase, copper containing 1"	protein-coding	30.08	5.82	5.16838488	6.85E-10
chr7-988	chr7	150602797	150603797	+	16.6	1000	Intergenic	L1MA9|LINE|L1	49620	NM_001204798	3757	Hs.647099	NM_000238	ENSG00000055118	KCNH2	ERG-1|ERG1|H-ERG|HERG|HERG1|Kv11.1|LQT2|SQT1	potassium voltage-gated channel subfamily H member 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr7-99	chr7	116165100	116166357	+	25	1257	promoter-TSS (NM_001172897)	promoter-TSS (NM_001172897)	-619	NM_001172896	857	Hs.74034	NM_001753	ENSG00000105974	CAV1	BSCL3|CGL3|LCCNS|MSTP085|PPH3|VIP21	caveolin 1	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr7-993	chr7	151106179	151108172	+	32	1993	promoter-TSS (NM_001284260)	promoter-TSS (NM_001284260)	-51	NM_198285	349136	Hs.647083	NM_198285	ENSG00000187260	WDR86	-	WD repeat domain 86	protein-coding	32	2.91	10.99656357	6.10E-18
chr7-995	chr7	151283903	151284903	+	16	1000	"intron (NM_016203, intron 6 of 15)"	L1MC3|LINE|L1	44941	NM_024429	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr7-996	chr7	151356137	151357387	+	23.7	1250	"intron (NM_016203, intron 4 of 15)"	"intron (NM_016203, intron 4 of 15)"	-27058	NM_001304531	51422	Hs.647072	NM_016203	ENSG00000106617	PRKAG2	AAKG|AAKG2|CMH6|H91620p|WPWS	protein kinase AMP-activated non-catalytic subunit gamma 2	protein-coding	23.68	3.88	6.103092784	4.22E-09
chr7-998	chr7	151620258	151621258	+	16.6	1000	Intergenic	L2c|LINE|L2	-32706	NM_145292	168391	Hs.647077	NM_145292	ENSG00000106648	GALNTL5	GALNACT19|GALNT15|GalNAc-T5L	polypeptide N-acetylgalactosaminyltransferase-like 5	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr8-1018	chr8	8132090	8133090	+	16.6	1000	Intergenic	Intergenic	46498	NR_024363	286042	Hs.656318	NR_024361	ENSG00000173295	FAM86B3P	-	"family with sequence similarity 86, member A pseudogene"	pseudo	16.64	3.4	4.894117647	4.51E-06
chr8-1022	chr8	8346598	8347598	+	16	1000	Intergenic	L2c|LINE|L2	-107754	NM_001080826	157285	Hs.583863	NM_001080826	ENSG00000275342	PRAG1	NACK|PEAK2|PRAGMIN|SGK223	PEAK1 related kinase activating pseudokinase 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr8-1023	chr8	8451830	8452830	+	16.6	1000	Intergenic	Intergenic	-107336	NM_194284	137075	Hs.183617	NM_194284	ENSG00000253958	CLDN23	CLDNL|hCG1646163	claudin 23	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr8-1025	chr8	9243221	9244765	+	25.6	1544	Intergenic	Intergenic	61432	NR_040039	157273	Hs.650222	NR_040039	ENSG00000254235	LOC157273	-	uncharacterized LOC157273	ncRNA	25.6	4.37	5.85812357	7.40E-10
chr8-1033	chr8	10762744	10764165	+	23	1421	"intron (NM_173683, intron 2 of 2)"	"intron (NM_173683, intron 2 of 2)"	65918	NR_125432	101929229	Hs.129800	NR_125432		LOC101929229	-	uncharacterized LOC101929229	ncRNA	23.04	3.88	5.93814433	4.22E-09
chr8-1034	chr8	10814417	10815417	+	16.6	1000	"intron (NM_173683, intron 1 of 2)"	"intron (NM_173683, intron 1 of 2)"	77895	NR_030328	693183		NR_030328	ENSG00000207600	MIR598	MIRN598|hsa-mir-598|mir-598	microRNA 598	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr8-1035	chr8	10827158	10828158	+	17.3	1000	"intron (NM_173683, intron 1 of 2)"	"intron (NM_173683, intron 1 of 2)"	65154	NR_030328	693183		NR_030328	ENSG00000207600	MIR598	MIRN598|hsa-mir-598|mir-598	microRNA 598	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr8-1036	chr8	10854704	10855704	+	15.4	1000	"intron (NM_173683, intron 1 of 2)"	"intron (NM_173683, intron 1 of 2)"	37608	NR_030328	693183		NR_030328	ENSG00000207600	MIR598	MIRN598|hsa-mir-598|mir-598	microRNA 598	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr8-1037	chr8	10946861	10948113	+	20.5	1252	"intron (NM_173683, intron 1 of 2)"	L1ME3C|LINE|L1	-22888	NR_134308	101929269	Hs.680442	NR_134308	ENSG00000254839	LOC101929269	-	uncharacterized LOC101929269	ncRNA	20.48	3.88	5.278350515	1.44E-07
chr8-1038	chr8	11044362	11045362	+	17.3	1000	"intron (NR_138153, intron 1 of 2)"	"intron (NR_138153, intron 1 of 2)"	14013	NR_138152	286046	Hs.657083	NM_173683	ENSG00000171044	XKR6	C8orf21|C8orf5|C8orf7|XRG6	XK related 6	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr8-1039	chr8	11095290	11096290	+	17.3	1000	Intergenic	Intergenic	-36915	NM_173683	286046	Hs.657083	NM_173683	ENSG00000171044	XKR6	C8orf21|C8orf5|C8orf7|XRG6	XK related 6	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr8-1044	chr8	11449246	11452970	+	62.1	3724	Intergenic	MIRc|SINE|MIR	17064	NR_040035	83655	Hs.742430	NR_040035	ENSG00000170983	LINC00208	C8orf14|NCRNA00208|VIR35	long intergenic non-protein coding RNA 208	ncRNA	62.09	8.74	7.104118993	1.11E-24
chr8-1045	chr8	11476742	11478031	+	18.6	1289	Intergenic	Intergenic	43342	NR_040035	83655	Hs.742430	NR_040035	ENSG00000170983	LINC00208	C8orf14|NCRNA00208|VIR35	long intergenic non-protein coding RNA 208	ncRNA	18.56	2.43	7.637860082	1.53E-08
chr8-1047	chr8	11557191	11560186	+	35.8	2995	"intron (NM_001308094, intron 2 of 6)"	"intron (NM_001308094, intron 2 of 6)"	-2972	NM_002052	2626	Hs.243987	NM_002052	ENSG00000136574	GATA4	ASD2|TACHD|TOF|VSD1	GATA binding protein 4	protein-coding	35.84	8.74	4.100686499	1.05E-09
chr8-1048	chr8	11578109	11579390	+	19.8	1281	"intron (NM_002052, intron 2 of 6)"	L2c|LINE|L2	13384	NM_001308093	2626	Hs.243987	NM_002052	ENSG00000136574	GATA4	ASD2|TACHD|TOF|VSD1	GATA binding protein 4	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr8-1049	chr8	11601218	11607877	+	100.5	6659	"intron (NM_002052, intron 2 of 6)"	"intron (NM_002052, intron 2 of 6)"	-14218	NR_103552	606553	Hs.545529	NM_001031839	ENSG00000255394	C8orf49	G4DM	chromosome 8 open reading frame 49	ncRNA	100.49	18.44	5.449566161	1.40E-31
chr8-1051	chr8	11614535	11617891	+	48	3356	"3' UTR (NM_001308094, exon 7 of 7)"	"3' UTR (NM_001308094, exon 7 of 7)"	-2552	NR_103552	606553	Hs.545529	NM_001031839	ENSG00000255394	C8orf49	G4DM	chromosome 8 open reading frame 49	ncRNA	48.01	5.82	8.249140893	1.93E-21
chr8-1053	chr8	11628437	11629689	+	19.8	1252	"exon (NM_145043, exon 2 of 5)"	"exon (NM_145043, exon 2 of 5)"	1891	NM_001135748	252969	Hs.293818	NM_145043	ENSG00000154328	NEIL2	NEH2|NEI2	nei like DNA glycosylase 2	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr8-1058	chr8	19660920	19661920	+	16	1000	Intergenic	L1M4c|LINE|L1	-13498	NM_018142	55174	Hs.512627	NM_018142	ENSG00000104613	INTS10	C8orf35|INT10	integrator complex subunit 10	protein-coding	16	2.91	5.498281787	4.98E-06
chr8-1064	chr8	20341076	20342517	+	19.8	1441	Intergenic	MIR3|SINE|MIR	208512	NR_047509	100874051	Hs.385799	NR_047509	ENSG00000253733	LZTS1-AS1	-	LZTS1 antisense RNA 1	ncRNA	19.84	1.94	10.22680412	9.57E-11
chr8-1066	chr8	20386507	20388072	+	23	1565	Intergenic	Intergenic	254005	NR_047509	100874051	Hs.385799	NR_047509	ENSG00000253733	LZTS1-AS1	-	LZTS1 antisense RNA 1	ncRNA	23.04	1.94	11.87628866	6.71E-14
chr8-1068	chr8	21332284	21333284	+	16.6	1000	Intergenic	Intergenic	177034	NR_104677	101929172	Hs.128668	NR_104677	ENSG00000254334	LOC101929172	-	uncharacterized LOC101929172	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr8-1071	chr8	21375369	21376369	+	16.6	1000	Intergenic	Intergenic	220119	NR_104677	101929172	Hs.128668	NR_104677	ENSG00000254334	LOC101929172	-	uncharacterized LOC101929172	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr8-1072	chr8	21498912	21501659	+	50.6	2747	Intergenic	Intergenic	146061	NM_001495	2675	Hs.441202	NM_001495	ENSG00000168546	GFRA2	GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2	GDNF family receptor alpha 2	protein-coding	50.57	11.65	4.340772532	1.79E-13
chr8-1076	chr8	21678075	21681551	+	48	3476	Intergenic	AluY|SINE|Alu	-33467	NM_001165038	2675	Hs.441202	NM_001495	ENSG00000168546	GFRA2	GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2	GDNF family receptor alpha 2	protein-coding	48.01	10.68	4.495318352	2.70E-13
chr8-1077	chr8	21922981	21923981	+	16.6	1000	promoter-TSS (NM_001323381)	promoter-TSS (NM_001323381)	-528	NM_001323385	2039	Hs.106124	NM_001978	ENSG00000158856	DMTN	DMT|EPB49	dematin actin binding protein	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr8-1083	chr8	22732785	22738429	+	84.5	5644	"non-coding (NR_125433, exon 1 of 4)"	"non-coding (NR_125433, exon 1 of 4)"	122	NR_125433	101929237	Hs.677838	NR_125433	ENSG00000248738	LOC101929237	-	uncharacterized LOC101929237	ncRNA	84.49	13.59	6.217071376	2.77E-30
chr8-1088	chr8	22801541	22802541	+	16.6	1000	Intergenic	MIR|SINE|MIR	-16620	NM_144962	157310	Hs.491242	NM_144962	ENSG00000134020	PEBP4	CORK-1|CORK1|GWTM1933|HEL-S-300|PEBP-4|PRO4408|hPEBP4	phosphatidylethanolamine binding protein 4	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr8-1091	chr8	23039471	23040471	+	16.6	1000	Intergenic	LOR1-int|LTR|ERV1	-18428	NM_003840	8793	Hs.213467	NM_003840	ENSG00000173530	TNFRSF10D	CD264|DCR2|TRAIL-R4|TRAILR4|TRUNDD	TNF receptor superfamily member 10d	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr8-1094	chr8	25679257	25680257	+	16.6	1000	Intergenic	MIRb|SINE|MIR	222883	NM_022659	64641	Hs.491292	NM_022659	ENSG00000221818	EBF2	COE2|EBF-2|O/E-3|OE-3	early B-cell factor 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr8-1097	chr8	26614057	26615057	+	14.7	1000	"intron (NM_001322502, intron 1 of 1)"	"intron (NM_001322502, intron 1 of 1)"	108615	NM_033304	148	Hs.52931	NM_000680	ENSG00000120907	ADRA1A	ADRA1C|ADRA1L1|ALPHA1AAR	adrenoceptor alpha 1A	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr8-1101	chr8	27468901	27469901	+	16	1000	promoter-TSS (NR_038335)	promoter-TSS (NR_038335)	-133	NR_045494	1191	Hs.436657	NM_001831	ENSG00000120885	CLU	AAG4|APO-J|APOJ|CLI|CLU1|CLU2|KUB1|NA1/NA2|SGP-2|SGP2|SP-40|TRPM-2|TRPM2	clusterin	protein-coding	16	2.91	5.498281787	4.98E-06
chr8-1107	chr8	27883891	27884891	+	15.4	1000	"intron (NM_001010906, intron 18 of 18)"	"intron (NM_001010906, intron 18 of 18)"	-34022	NM_173833	286133	Hs.591833	NM_173833	ENSG00000168079	SCARA5	NET33|Tesr	scavenger receptor class A member 5	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr8-1110	chr8	28173453	28177032	+	71.7	3579	"intron (NM_006228, intron 1 of 3)"	"intron (NM_006228, intron 1 of 3)"	593	NM_006228	5368	Hs.88218	NM_006228	ENSG00000168081	PNOC	N/OFQ|NOP|OFQ|PPNOC|ppN/OFQ	prepronociceptin	protein-coding	71.69	12.62	5.68066561	3.99E-24
chr8-1112	chr8	28302329	28303329	+	15.4	1000	"intron (NM_172366, intron 7 of 8)"	"intron (NM_172366, intron 7 of 8)"	45006	NM_001258211	157574	Hs.741522	NM_172366	ENSG00000214050	FBXO16	FBX16	F-box protein 16	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr8-1115	chr8	29194229	29195785	+	26.2	1556	"intron (NM_057158, intron 4 of 4)"	"intron (NM_057158, intron 4 of 4)"	11315	NM_057158	1846	Hs.417962	NM_001394	ENSG00000120875	DUSP4	HVH2|MKP-2|MKP2|TYP	dual specificity phosphatase 4	protein-coding	26.24	0.97	27.05154639	7.61E-22
chr8-1119	chr8	30703878	30704878	+	16.6	1000	"exon (NM_031271, exon 1 of 4)"	"exon (NM_031271, exon 1 of 4)"	2155	NM_031271	56154	Hs.458316	NM_031271	ENSG00000133863	TEX15	CT42	"testis expressed 15, meiosis and synapsis associated"	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr8-1121	chr8	37276847	37278178	+	17.9	1331	"intron (NR_121620, intron 6 of 6)"	"intron (NR_121620, intron 6 of 6)"	73919	NR_121620	100507420	Hs.105962	NR_121620		LINC01605	-	long intergenic non-protein coding RNA 1605	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr8-1126	chr8	41510467	41518615	+	116.5	8148	"intron (NM_020480, intron 2 of 2)"	"intron (NM_020480, intron 2 of 2)"	-3421	NR_106984	102465696		NR_106984	ENSG00000283450	MIR486-2	hsa-mir-486-2|mir-486-2	microRNA 486-2	ncRNA	116.49	16.99	6.856386109	2.27E-44
chr8-1127	chr8	41526978	41528252	+	20.5	1274	"intron (NM_000037, intron 38 of 42)"	L2a|LINE|L2	-4811	NM_001142445	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr8-1129	chr8	41599865	41600865	+	16.6	1000	"intron (NM_000037, intron 2 of 42)"	"intron (NM_000037, intron 2 of 42)"	54775	NM_000037	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr8-1130	chr8	41603276	41606485	+	48	3209	"intron (NM_000037, intron 2 of 42)"	"intron (NM_000037, intron 2 of 42)"	50260	NM_000037	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding	48.01	6.8	7.060294118	2.78E-19
chr8-1132	chr8	41681017	41682017	+	17.3	1000	"intron (NM_001142446, intron 1 of 42)"	AluSx|SINE|Alu	-26377	NM_020476	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr8-1133	chr8	42562551	42563551	+	16.6	1000	"intron (NM_001347717, intron 2 of 6)"	L2a|LINE|L2	10489	NM_000749	1142	Hs.654576	NM_000749	ENSG00000147432	CHRNB3	-	cholinergic receptor nicotinic beta 3 subunit	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr8-1134	chr8	47016673	47018274	+	25.6	1601	Intergenic	GSAT|Satellite|centr	-735035	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	25.6	3.88	6.597938144	1.00E-10
chr8-1138	chr8	47107771	47114414	+	93.5	6643	Intergenic	GSAT|Satellite|centr	-641416	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	93.45	10.68	8.75	1.07E-42
chr8-1143	chr8	47117504	47129418	+	163.2	11914	Intergenic	GSAT|Satellite|centr	-629047	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	163.22	30.09	5.424393486	3.49E-50
chr8-1146	chr8	47144113	47148502	+	59.5	4389	Intergenic	GSAT|Satellite|centr	-606201	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	59.53	14.08	4.227982955	3.13E-15
chr8-1150	chr8	47356780	47357780	+	16	1000	Intergenic	GSAT|Satellite|centr	-395228	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	16	3.88	4.12371134	7.91E-05
chr8-1151	chr8	49832801	49834096	+	24.3	1295	"intron (NM_003068, intron 1 of 2)"	"intron (NM_003068, intron 1 of 2)"	551	NM_003068	6591	Hs.360174	NM_003068	ENSG00000019549	SNAI2	SLUG|SLUGH|SLUGH1|SNAIL2|WS2D	snail family transcriptional repressor 2	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr8-1152	chr8	53389658	53390658	+	16.6	1000	Intergenic	Intergenic	-67719	NM_014682	9705	Hs.655499	NM_014682	ENSG00000147488	ST18	NZF3|ZC2H2C3|ZC2HC10|ZNF387	"ST18, C2H2C-type zinc finger"	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr8-1156	chr8	59070945	59071945	+	17.3	1000	Intergenic	(TA)n|Simple_repeat|Simple_repeat	113215	NR_105005	101929528	Hs.563551	NR_105005	ENSG00000253281	LOC101929528	-	uncharacterized LOC101929528	ncRNA	17.28	2.43	7.111111111	1.14E-07
chr8-1157	chr8	59304200	59305464	+	18.6	1264	Intergenic	Intergenic	-18991	NM_001077619	137886	Hs.155572	NM_001077619	ENSG00000215114	UBXN2B	p37	UBX domain protein 2B	protein-coding	18.56	2.43	7.637860082	1.53E-08
chr8-1159	chr8	63882145	63883145	+	15.4	1000	"intron (NR_130764, intron 5 of 6)"	AluJr|SINE|Alu	-7775	NR_027378	643763	Hs.491856	NM_001039769	ENSG00000274956	UG0898H09	-	uncharacterized LOC643763	ncRNA	15.36	0	15.82260557	1.26E-14
chr8-1161	chr8	66963881	66964881	+	16.6	1000	"intron (NM_033105, intron 3 of 5)"	AluSx|SINE|Alu	30590	NM_033105	85479	Hs.491885	NM_033105	ENSG00000147570	DNAJC5B	CSP-beta	DnaJ heat shock protein family (Hsp40) member C5 beta	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr8-1163	chr8	67033845	67034845	+	17.3	1000	Intergenic	Intergenic	-4933	NM_184085	84675	Hs.85524	NM_033058	ENSG00000147573	TRIM55	MURF-2|RNF29|muRF2	tripartite motif containing 55	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr8-1166	chr8	67108149	67109149	+	16.6	1000	"intron (NR_039979, intron 2 of 2)"	L2a|LINE|L2	4300	NR_039979	100505659	Hs.529729	NR_039979	ENSG00000253138	LINC00967	-	long intergenic non-protein coding RNA 967	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr8-1168	chr8	70608827	70609827	+	17.3	1000	"intron (NM_030958, intron 6 of 9)"	HAL1|LINE|L1	104192	NR_132437	23213	Hs.409602	NM_015170	ENSG00000137573	SULF1	SULF-1	sulfatase 1	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr8-117	chr8	144507782	144515990	+	130.6	8208	"exon (NM_201589, exon 1 of 1)"	"exon (NM_201589, exon 1 of 1)"	716	NM_201589	389692	Hs.521914	NM_201589	ENSG00000182759	MAFA	RIPE3b1|hMafA	MAF bZIP transcription factor A	protein-coding	130.58	19.42	6.723995881	8.89E-49
chr8-1172	chr8	80798027	80801666	+	57	3639	Intergenic	Intergenic	-15874	NR_110954	101927040	Hs.350876	NR_110954	ENSG00000249328	LOC101927040	-	uncharacterized LOC101927040	ncRNA	56.97	7.28	7.825549451	2.40E-24
chr8-1176	chr8	95653736	95657413	+	52.5	3677	"exon (NM_001122827, exon 3 of 14)"	"exon (NM_001122827, exon 3 of 14)"	2210	NM_001034915	54845	Hs.487471	NM_017697	ENSG00000104413	ESRP1	RBM35A|RMB35A	epithelial splicing regulatory protein 1	protein-coding	52.49	12.13	4.327287716	3.28E-14
chr8-1179	chr8	98938130	98939130	+	16.6	1000	"intron (NM_002380, intron 2 of 18)"	"intron (NM_002380, intron 2 of 18)"	57381	NM_001317748	4147	Hs.189445	NM_002380	ENSG00000132561	MATN2	-	matrilin 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr8-1184	chr8	101234469	101235469	+	16.6	1000	"intron (NM_172218, intron 13 of 18)"	"intron (NM_172218, intron 13 of 18)"	64406	NM_003114	6674	Hs.591866	NM_003114	ENSG00000104450	SPAG1	CILD28|CT140|HEL-S-268|HSD-3.8|SP75|TPIS	sperm associated antigen 1	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr8-1189	chr8	117532608	117533608	+	17.3	1000	Intergenic	Intergenic	-131231	NR_136278	105375713		NR_136278		LOC105375713	-	uncharacterized LOC105375713	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr8-1190	chr8	117571835	117572835	+	16.6	1000	Intergenic	Intergenic	-92004	NR_136278	105375713		NR_136278		LOC105375713	-	uncharacterized LOC105375713	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr8-1193	chr8	123616058	123617319	+	19.2	1261	Intergenic	Intergenic	-35805	NR_131202	105375734	Hs.628341	NR_131202		LOC105375734	-	uncharacterized LOC105375734	ncRNA	19.2	0.97	19.79381443	5.65E-15
chr8-1194	chr8	124551185	124553312	+	34.6	2127	"intron (NM_001242463, intron 1 of 6)"	"intron (NM_001242463, intron 1 of 6)"	1245	NM_058229	114907	Hs.403933	NM_058229	ENSG00000156804	FBXO32	Fbx32|MAFbx	F-box protein 32	protein-coding	34.56	1.94	17.81443299	1.63E-24
chr8-120	chr8	2258605	2260164	+	30.1	1559	Intergenic	L1MC4a|LINE|L1	221069	NR_125423	101927815	Hs.571467	NR_125423	ENSG00000254319	LOC101927815	-	uncharacterized LOC101927815	ncRNA	30.08	6.8	4.423529412	1.16E-08
chr8-1200	chr8	126515329	126516329	+	16	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	71378	NM_001282985	10221	Hs.444947	NM_025195	ENSG00000173334	TRIB1	C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1	tribbles pseudokinase 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr8-1205	chr8	128710899	128711899	+	16.6	1000	Intergenic	Intergenic	34814	NR_117102	100270680	Hs.333720	NR_117101	ENSG00000249375	CASC11	CARLo-7|LINC00990|TCONS_00014535	cancer susceptibility candidate 11 (non-protein coding)	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr8-1208	chr8	131458330	131460984	+	39.7	2654	Intergenic	THE1B|LTR|ERVL-MaLR	-3751	NM_018482	50807	Hs.655552	NM_018482	ENSG00000153317	ASAP1	AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 1"	protein-coding	39.69	8.25	4.810909091	2.95E-12
chr8-121	chr8	10850881	10852138	+	26.9	1257	"intron (NM_173683, intron 1 of 2)"	"intron (NM_173683, intron 1 of 2)"	41303	NR_030328	693183		NR_030328	ENSG00000207600	MIR598	MIRN598|hsa-mir-598|mir-598	microRNA 598	ncRNA	26.88	2.91	9.237113402	7.03E-14
chr8-1214	chr8	139769414	139770414	+	16.6	1000	"intron (NM_152888, intron 18 of 64)"	MIR|SINE|MIR	156335	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr8-1215	chr8	141732512	141733512	+	14.7	1000	"intron (NM_001316342, intron 22 of 32)"	"intron (NM_001316342, intron 22 of 32)"	-87366	NM_001164623	27161	Hs.743313	NM_012154	ENSG00000123908	AGO2	EIF2C2|Q10	"argonaute 2, RISC catalytic component"	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr8-1220	chr8	141965726	141966976	+	21.1	1250	"intron (NM_153831, intron 1 of 31)"	HAL1|LINE|L1	45061	NM_005607	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr8-1223	chr8	142138334	142139845	+	24.3	1511	"intron (NM_014957, intron 1 of 22)"	CpG	369	NM_014957	22898	Hs.18166	NM_014957	ENSG00000105339	DENND3	-	DENN domain containing 3	protein-coding	24.32	0.97	25.07216495	2.01E-20
chr8-1225	chr8	142426532	142427532	+	17.3	1000	Intergenic	Intergenic	-4456	NM_007079	11156	Hs.43666	NM_007079	ENSG00000184489	PTP4A3	PRL-3|PRL-R|PRL3	"protein tyrosine phosphatase type IVA, member 3"	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr8-1227	chr8	142514895	142516171	+	21.8	1276	"intron (NM_207414, intron 1 of 29)"	L2a|LINE|L2	1797	NM_207414	389690	Hs.689547	NM_207414	ENSG00000226807	MROH5	-	maestro heat like repeat family member 5	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr8-1230	chr8	142596931	142597931	+	17.3	1000	Intergenic	Intergenic	-80101	NR_102364	389690	Hs.689547	NM_207414	ENSG00000226807	MROH5	-	maestro heat like repeat family member 5	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr8-1234	chr8	143143241	143144241	+	16	1000	Intergenic	AluSz6|SINE|Alu	-64084	NR_130468	100616374		NR_130468	ENSG00000265612	MIR4539	-	microRNA 4539	ncRNA	16	2.91	5.498281787	4.98E-06
chr8-1235	chr8	143212915	143214244	+	18.6	1329	Intergenic	Intergenic	-44121	NR_039682	100616268		NR_039682	ENSG00000265247	MIR4472-1	-	microRNA 4472-1	ncRNA	18.56	3.4	5.458823529	8.42E-07
chr8-1236	chr8	143321716	143322716	+	16.6	1000	"intron (NM_145003, intron 12 of 13)"	L1MEe|LINE|L1	42499	NR_024378	619434	Hs.393308	NR_024378	ENSG00000254008	LINC00051	C8orf43|NCRNA00051	long intergenic non-protein coding RNA 51	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr8-1243	chr8	143960598	143961598	+	17.3	1000	"exon (NM_000497, exon 1 of 9)"	"exon (NM_000497, exon 1 of 9)"	138	NM_001026213	1584	Hs.184927	NM_000497	ENSG00000160882	CYP11B1	CPN1|CYP11B|FHI|P450C11	cytochrome P450 family 11 subfamily B member 1	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr8-1244	chr8	143998247	143999247	+	16	1000	"intron (NM_000498, intron 1 of 8)"	"intron (NM_000498, intron 1 of 8)"	512	NM_000498	1585	Hs.632054	NM_000498	ENSG00000179142	CYP11B2	ALDOS|CPN2|CYP11B|CYP11BL|CYPXIB2|P-450C18|P450C18|P450aldo	cytochrome P450 family 11 subfamily B member 2	protein-coding	16	0.97	16.49484536	3.54E-11
chr8-1245	chr8	144092713	144094435	+	25	1722	"intron (NR_026913, intron 1 of 1)"	MER41-int|LTR|ERV1	6233	NR_026913	100133669	Hs.195309	NR_026913		LOC100133669	-	uncharacterized LOC100133669	ncRNA	24.96	4.37	5.711670481	4.38E-09
chr8-1249	chr8	144951117	144952117	+	16.6	1000	"intron (NM_031308, intron 1 of 2)"	"intron (NM_031308, intron 1 of 2)"	1015	NM_031308	83481	Hs.200412	NM_031308	ENSG00000261150	EPPK1	EPIPL|EPIPL1	epiplakin 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr8-1250	chr8	145865055	145866055	+	16	1000	"intron (NM_001308208, intron 1 of 10)"	"intron (NM_001308208, intron 1 of 10)"	-26667	NM_001308207	80728	Hs.148988	NM_025251	ENSG00000147799	ARHGAP39	CrGAP|Vilse	Rho GTPase activating protein 39	protein-coding	16	2.43	6.58436214	7.90E-07
chr8-1258	chr8	819152	820476	+	21.1	1324	"intron (NR_073397, intron 2 of 3)"	"intron (NR_073397, intron 2 of 3)"	131266	NR_134292	401442	Hs.678992	NR_134292	ENSG00000282375	LOC401442	-	uncharacterized LOC401442	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr8-1259	chr8	858867	859867	+	16	1000	"intron (NM_001346810, intron 2 of 14)"	"intron (NM_001346810, intron 2 of 14)"	170819	NR_134292	401442	Hs.678992	NR_134292	ENSG00000282375	LOC401442	-	uncharacterized LOC401442	ncRNA	16	3.88	4.12371134	7.91E-05
chr8-126	chr8	22812842	22814363	+	28.2	1521	Intergenic	L1MC4a|LINE|L1	-28181	NM_144962	157310	Hs.491242	NM_144962	ENSG00000134020	PEBP4	CORK-1|CORK1|GWTM1933|HEL-S-300|PEBP-4|PRO4408|hPEBP4	phosphatidylethanolamine binding protein 4	protein-coding	28.16	5.82	4.838487973	3.50E-09
chr8-1263	chr8	1067728	1070014	+	33.3	2286	"intron (NM_001346810, intron 2 of 14)"	"intron (NM_001346810, intron 2 of 14)"	181952	NR_111948	286083	Hs.382131	NR_033895	ENSG00000275427	LOC286083	-	uncharacterized LOC286083	ncRNA	33.28	2.91	11.43642612	5.32E-19
chr8-1265	chr8	1078127	1079413	+	18.6	1286	"intron (NM_001346810, intron 2 of 14)"	"intron (NM_001346810, intron 2 of 14)"	172053	NR_111948	286083	Hs.382131	NR_033895	ENSG00000275427	LOC286083	-	uncharacterized LOC286083	ncRNA	18.56	2.43	7.637860082	1.53E-08
chr8-1269	chr8	1253881	1254881	+	16	1000	"intron (NM_001346810, intron 3 of 14)"	L1MB3|LINE|L1	-3558	NR_111948	286083	Hs.382131	NR_033895	ENSG00000275427	LOC286083	-	uncharacterized LOC286083	ncRNA	16	1.94	8.24742268	7.67E-08
chr8-1271	chr8	1430492	1431492	+	16	1000	"intron (NM_001346810, intron 3 of 14)"	CpG	-18540	NM_001277161	9228	Hs.113287	NM_004745	ENSG00000198010	DLGAP2	DAP2|SAPAP2	DLG associated protein 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr8-1277	chr8	1673980	1674980	+	16	1000	Intergenic	Intergenic	37020	NR_134302	101927752	Hs.356690	NR_134302	ENSG00000253982	LOC101927752	-	uncharacterized LOC101927752	ncRNA	16	2.91	5.498281787	4.98E-06
chr8-1278	chr8	1759361	1761059	+	25.6	1698	Intergenic	Intergenic	-5187	NR_030326	693181		NR_030326	ENSG00000207826	MIR596	MIRN596|hsa-mir-596	microRNA 596	ncRNA	25.6	1.94	13.19587629	4.03E-16
chr8-1284	chr8	1986884	1989757	+	32	2873	Intergenic	(TCTA)n|Simple_repeat|Simple_repeat	-4838	NM_003970	9172	Hs.443683	NM_003970	ENSG00000036448	MYOM2	TTNAP	myomesin 2	protein-coding	32	6.8	4.705882353	5.32E-10
chr8-1287	chr8	2006411	2011397	+	76.2	4986	"intron (NM_003970, intron 6 of 36)"	"intron (NM_003970, intron 6 of 36)"	15746	NM_003970	9172	Hs.443683	NM_003970	ENSG00000036448	MYOM2	TTNAP	myomesin 2	protein-coding	76.17	16.02	4.754681648	1.85E-21
chr8-1297	chr8	2903341	2904341	+	16	1000	"intron (NM_033225, intron 50 of 69)"	"intron (NM_033225, intron 50 of 69)"	-317850	NR_125425	101927815	Hs.571467	NR_125423	ENSG00000254319	LOC101927815	-	uncharacterized LOC101927815	ncRNA	16	2.91	5.498281787	4.98E-06
chr8-1298	chr8	4848258	4849791	+	21.1	1533	"intron (NM_033225, intron 1 of 69)"	CpG	3304	NM_033225	64478	Hs.571466	NM_033225	ENSG00000183117	CSMD1	PPP1R24	CUB and Sushi multiple domains 1	protein-coding	21.12	0	21.75608266	5.97E-21
chr8-1299	chr8	5408543	5409543	+	15.4	1000	Intergenic	Intergenic	-556715	NM_033225	64478	Hs.571466	NM_033225	ENSG00000183117	CSMD1	PPP1R24	CUB and Sushi multiple domains 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr8-1302	chr8	6722649	6723649	+	14.1	1000	Intergenic	Intergenic	12380	NM_005218	1672	Hs.32949	NM_005218	ENSG00000164825	DEFB1	BD1|DEFB-1|DEFB101|HBD1	defensin beta 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr8-1304	chr8	8281964	8283217	+	18.6	1253	Intergenic	Intergenic	-43246	NM_001080826	157285	Hs.583863	NM_001080826	ENSG00000275342	PRAG1	NACK|PEAK2|PRAGMIN|SGK223	PEAK1 related kinase activating pseudokinase 1	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr8-1309	chr8	8485941	8486941	+	16	1000	Intergenic	LTR40b|LTR|ERVL	-73225	NM_194284	137075	Hs.183617	NM_194284	ENSG00000253958	CLDN23	CLDNL|hCG1646163	claudin 23	protein-coding	16	1.94	8.24742268	7.67E-08
chr8-1315	chr8	9256203	9257203	+	15.4	1000	Intergenic	Intergenic	74142	NR_040039	157273	Hs.650222	NR_040039	ENSG00000254235	LOC157273	-	uncharacterized LOC157273	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr8-1318	chr8	9753235	9754235	+	14.7	1000	Intergenic	AluSx|SINE|Alu	7104	NR_024281	157627	Hs.12513	NR_024281	ENSG00000253230	LINC00599	Rncr3	long intergenic non-protein coding RNA 599	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr8-1320	chr8	10439051	10440051	+	16.6	1000	Intergenic	AluSz6|SINE|Alu	56495	NM_001197020	203074	Hs.591394	NM_198464	ENSG00000184647	PRSS55	CT153|T-SP1|TSP1|UNQ9391	"protease, serine 55"	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr8-1321	chr8	10460247	10461921	+	24.3	1674	Intergenic	Intergenic	51533	NM_178857	94137	Hs.33538	NM_178857	ENSG00000183638	RP1L1	DCDC4B	RP1 like 1	protein-coding	24.32	4.37	5.565217391	4.38E-09
chr8-1322	chr8	10465176	10466541	+	21.8	1365	"exon (NM_178857, exon 4 of 4)"	"exon (NM_178857, exon 4 of 4)"	46759	NM_178857	94137	Hs.33538	NM_178857	ENSG00000183638	RP1L1	DCDC4B	RP1 like 1	protein-coding	21.76	0	22.41535789	1.33E-22
chr8-1324	chr8	10533654	10534654	+	16.6	1000	"intron (NM_001040032, intron 2 of 3)"	"intron (NM_001040032, intron 2 of 3)"	4007	NM_001040032	203076	Hs.371776	NM_001040032	ENSG00000171060	C8orf74	-	chromosome 8 open reading frame 74	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr8-1325	chr8	10716517	10717517	+	14.7	1000	Intergenic	Intergenic	19481	NR_125432	101929229	Hs.129800	NR_125432		LOC101929229	-	uncharacterized LOC101929229	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr8-133	chr8	134144229	134145496	+	25.6	1267	"intron (NM_003235, intron 46 of 47)"	L2c|LINE|L2	-29552	NM_001045556	6503	Hs.75367	NM_006748	ENSG00000155926	SLA	SLA1|SLAP	Src like adaptor	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr8-1333	chr8	10870882	10872353	+	26.9	1471	"intron (NM_173683, intron 1 of 2)"	"intron (NM_173683, intron 1 of 2)"	21195	NR_030328	693183		NR_030328	ENSG00000207600	MIR598	MIRN598|hsa-mir-598|mir-598	microRNA 598	ncRNA	26.88	5.34	5.033707865	3.94E-09
chr8-1336	chr8	11306361	11307361	+	16	1000	"intron (NM_053279, intron 1 of 2)"	"intron (NM_053279, intron 1 of 2)"	17415	NM_053279	83648	Hs.124299	NM_053279	ENSG00000154319	FAM167A	C8orf13|D8S265	family with sequence similarity 167 member A	protein-coding	16	2.91	5.498281787	4.98E-06
chr8-134	chr8	142047536	142048809	+	25.6	1273	Intergenic	Intergenic	-36760	NM_001316342	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding	25.6	2.91	8.797250859	6.53E-13
chr8-1340	chr8	11423007	11424007	+	16	1000	Intergenic	Intergenic	-10537	NR_040035	83655	Hs.742430	NR_040035	ENSG00000170983	LINC00208	C8orf14|NCRNA00208|VIR35	long intergenic non-protein coding RNA 208	ncRNA	16	0.97	16.49484536	3.54E-11
chr8-1347	chr8	11546310	11547310	+	16.6	1000	"intron (NM_001308094, intron 1 of 6)"	MIR3|SINE|MIR	12382	NM_001308094	2626	Hs.243987	NM_002052	ENSG00000136574	GATA4	ASD2|TACHD|TOF|VSD1	GATA binding protein 4	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr8-1348	chr8	11586796	11589896	+	71	3100	"intron (NM_002052, intron 2 of 6)"	MIRb|SINE|MIR	22981	NM_001308093	2626	Hs.243987	NM_002052	ENSG00000136574	GATA4	ASD2|TACHD|TOF|VSD1	GATA binding protein 4	protein-coding	71.05	15.53	4.575016098	2.24E-19
chr8-1355	chr8	16859243	16860583	+	20.5	1340	promoter-TSS (NM_019851)	promoter-TSS (NM_019851)	-239	NM_019851	26281	Hs.199905	NM_019851	ENSG00000078579	FGF20	FGF-20|RHDA2	fibroblast growth factor 20	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr8-1357	chr8	18177521	18179123	+	24.3	1602	Intergenic	LTR2|LTR|ERV1	-70433	NM_000015	10	Hs.2	NM_000015	ENSG00000156006	NAT2	AAC2|NAT-2|PNAT	N-acetyltransferase 2	protein-coding	24.32	3.88	6.268041237	6.68E-10
chr8-1360	chr8	19754320	19755320	+	15.4	1000	Intergenic	MER4B|LTR|ERV1	-41762	NM_000237	4023	Hs.180878	NM_000237	ENSG00000175445	LPL	HDLCQ11|LIPD	lipoprotein lipase	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr8-1364	chr8	20038035	20039035	+	16.6	1000	"5' UTR (NM_001135691, exon 3 of 17)"	"5' UTR (NM_001135691, exon 3 of 17)"	2182	NM_001135691	6570	Hs.158322	NM_003053	ENSG00000036565	SLC18A1	CGAT|VAT1|VMAT1	solute carrier family 18 member A1	protein-coding	16.64	0	17.14115603	3.68E-16
chr8-1365	chr8	20215768	20216768	+	16.6	1000	Intergenic	Intergenic	82984	NR_047509	100874051	Hs.385799	NR_047509	ENSG00000253733	LZTS1-AS1	-	LZTS1 antisense RNA 1	ncRNA	16.64	2.43	6.847736626	1.14E-07
chr8-1368	chr8	20331872	20337238	+	73.6	5366	Intergenic	Intergenic	201271	NR_047509	100874051	Hs.385799	NR_047509	ENSG00000253733	LZTS1-AS1	-	LZTS1 antisense RNA 1	ncRNA	73.61	17.47	4.213508872	1.91E-18
chr8-1374	chr8	20571124	20573603	+	33.3	2479	Intergenic	MIRb|SINE|MIR	-238781	NR_130773	102467222	Hs.444226	NR_130773	ENSG00000253147	LOC102467222	-	uncharacterized LOC102467222	ncRNA	33.28	5.82	5.718213058	4.04E-12
chr8-1377	chr8	20976400	20977400	+	15.4	1000	Intergenic	Intergenic	145403	NR_033894	286114	Hs.651884	NR_033894	ENSG00000253199	LINC02153	-	long intergenic non-protein coding RNA 2153	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr8-1378	chr8	21109587	21110587	+	16.6	1000	Intergenic	Intergenic	-45663	NR_104677	101929172	Hs.128668	NR_104677	ENSG00000254334	LOC101929172	-	uncharacterized LOC101929172	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr8-1383	chr8	21327295	21328295	+	16	1000	Intergenic	Intergenic	172045	NR_104677	101929172	Hs.128668	NR_104677	ENSG00000254334	LOC101929172	-	uncharacterized LOC101929172	ncRNA	16	3.88	4.12371134	7.91E-05
chr8-1389	chr8	21534103	21535644	+	25	1541	Intergenic	Intergenic	111473	NM_001495	2675	Hs.441202	NM_001495	ENSG00000168546	GFRA2	GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2	GDNF family receptor alpha 2	protein-coding	24.96	2.91	8.577319588	5.77E-12
chr8-1390	chr8	21541135	21542930	+	27.5	1795	Intergenic	MIR3|SINE|MIR	104314	NM_001495	2675	Hs.441202	NM_001495	ENSG00000168546	GFRA2	GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2	GDNF family receptor alpha 2	protein-coding	27.52	3.88	7.092783505	1.44E-11
chr8-1399	chr8	21937039	21938293	+	17.3	1254	"intron (NM_001114135, intron 10 of 15)"	"intron (NM_001114135, intron 10 of 15)"	-9048	NM_022749	64760	Hs.491223	NM_022749	ENSG00000158863	FAM160B2	RAI16	family with sequence similarity 160 member B2	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr8-1400	chr8	21977120	21978576	+	23.7	1456	"intron (NM_018411, intron 12 of 17)"	"intron (NM_018411, intron 12 of 17)"	10717	NM_018411	55806	Hs.272367	NM_005144	ENSG00000168453	HR	ALUNC|AU|HSA277165|HYPT4|MUHH|MUHH1	"HR, lysine demethylase and nuclear receptor corepressor"	protein-coding	23.68	0.97	24.41237113	5.03E-19
chr8-1401	chr8	21989453	21990791	+	19.8	1338	Intergenic	Intergenic	-1557	NM_005144	55806	Hs.272367	NM_005144	ENSG00000168453	HR	ALUNC|AU|HSA277165|HYPT4|MUHH|MUHH1	"HR, lysine demethylase and nuclear receptor corepressor"	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr8-1411	chr8	22537004	22538004	+	16	1000	Intergenic	MIR|SINE|MIR	-10843	NM_018688	55909	Hs.433722	NM_018688	ENSG00000147439	BIN3	-	bridging integrator 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr8-1415	chr8	22554706	22555706	+	16	1000	Intergenic	Intergenic	-4391	NM_004430	1960	Hs.534313	NM_004430	ENSG00000179388	EGR3	EGR-3|PILOT	early growth response 3	protein-coding	16	3.4	4.705882353	2.25E-05
chr8-142	chr8	10420739	10422749	+	41.6	2010	Intergenic	Intergenic	38688	NM_001197020	203074	Hs.591394	NM_198464	ENSG00000184647	PRSS55	CT153|T-SP1|TSP1|UNQ9391	"protease, serine 55"	protein-coding	41.61	7.77	5.355212355	1.22E-13
chr8-1428	chr8	23066058	23067332	+	16.6	1274	"intron (NM_003844, intron 2 of 9)"	THE1B-int|LTR|ERVL-MaLR	15985	NM_003844	8797	Hs.213467	NM_003844	ENSG00000104689	TNFRSF10A	APO2|CD261|DR4|TRAILR-1|TRAILR1	TNF receptor superfamily member 10a	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr8-1429	chr8	23080984	23081984	+	14.1	1000	"intron (NM_003844, intron 1 of 9)"	"intron (NM_003844, intron 1 of 9)"	1196	NM_003844	8797	Hs.213467	NM_003844	ENSG00000104689	TNFRSF10A	APO2|CD261|DR4|TRAILR-1|TRAILR1	TNF receptor superfamily member 10a	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr8-143	chr8	10880305	10881577	+	24.3	1272	"intron (NM_173683, intron 1 of 2)"	AluJo|SINE|Alu	11871	NR_030328	693183		NR_030328	ENSG00000207600	MIR598	MIRN598|hsa-mir-598|mir-598	microRNA 598	ncRNA	24.32	2.91	8.357388316	5.77E-12
chr8-1431	chr8	23639103	23640103	+	14.7	1000	Intergenic	Intergenic	72717	NM_003155	6781	Hs.25590	NM_003155	ENSG00000159167	STC1	STC	stanniocalcin 1	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr8-1434	chr8	24999928	25000928	+	14.7	1000	Intergenic	L1MB7|LINE|L1	-41810	NM_024940	80005	Hs.195403	NM_024940	ENSG00000147459	DOCK5	-	dedicator of cytokinesis 5	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr8-1438	chr8	26041409	26042409	+	16.6	1000	Intergenic	Intergenic	-107098	NM_002717	5520	Hs.146339	NM_002717	ENSG00000221914	PPP2R2A	B55A|B55ALPHA|PR52A|PR55A	protein phosphatase 2 regulatory subunit Balpha	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr8-1439	chr8	26137715	26139435	+	26.2	1720	Intergenic	Intergenic	-10432	NM_002717	5520	Hs.146339	NM_002717	ENSG00000221914	PPP2R2A	B55A|B55ALPHA|PR52A|PR55A	protein phosphatase 2 regulatory subunit Balpha	protein-coding	26.24	0.97	27.05154639	7.61E-22
chr8-144	chr8	11553749	11555089	+	28.8	1340	"intron (NM_001308094, intron 1 of 6)"	"intron (NM_001308094, intron 1 of 6)"	-7241	NM_002052	2626	Hs.243987	NM_002052	ENSG00000136574	GATA4	ASD2|TACHD|TOF|VSD1	GATA binding protein 4	protein-coding	28.8	6.8	4.235294118	5.07E-08
chr8-1441	chr8	26594235	26595235	+	15.4	1000	Intergenic	Intergenic	128437	NM_033304	148	Hs.52931	NM_000680	ENSG00000120907	ADRA1A	ADRA1C|ADRA1L1|ALPHA1AAR	adrenoceptor alpha 1A	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr8-1443	chr8	27018393	27019393	+	16	1000	Intergenic	L1MA10|LINE|L1	97063	NM_001283053	81551	Hs.201058	NM_030795	ENSG00000015592	STMN4	RB3	stathmin 4	protein-coding	16	3.88	4.12371134	7.91E-05
chr8-1451	chr8	28371459	28372714	+	23	1255	"intron (NM_145866, intron 2 of 6)"	L1ME1|LINE|L1	-9387	NR_036250	100422903		NR_036250	ENSG00000265251	MIR4288	-	microRNA 4288	ncRNA	23.04	5.34	4.314606742	4.49E-07
chr8-1457	chr8	30170513	30171513	+	14.7	1000	Intergenic	Intergenic	-71004	NM_001008712	11030	Hs.334587	NM_006867	ENSG00000157110	RBPMS	HERMES	RNA binding protein with multiple splicing	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr8-1459	chr8	30306252	30307252	+	16.6	1000	"intron (NM_001008710, intron 1 of 8)"	"intron (NM_001008710, intron 1 of 8)"	-63835	NR_046205	100128750	Hs.126813	NR_046205	ENSG00000254109	RBPMS-AS1	-	RBPMS antisense RNA 1	ncRNA	16.64	1.46	11.39726027	2.99E-10
chr8-1460	chr8	30769397	30770397	+	16.6	1000	Intergenic	CpG	-63364	NM_031271	56154	Hs.458316	NM_031271	ENSG00000133863	TEX15	CT42	"testis expressed 15, meiosis and synapsis associated"	protein-coding	16.64	0.49	33.95918367	3.68E-16
chr8-1461	chr8	32761272	32762272	+	15.4	1000	Intergenic	Intergenic	182501	NM_001322197	3084	Hs.453951	NM_004495	ENSG00000157168	NRG1	ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF	neuregulin 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr8-1463	chr8	33088945	33089945	+	15.4	1000	Intergenic	L2c|LINE|L2	241219	NM_032664	84750	Hs.458713	NM_032664	ENSG00000172728	FUT10	FUCTX	fucosyltransferase 10	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr8-1464	chr8	33138043	33139043	+	16	1000	Intergenic	L2a|LINE|L2	192121	NM_032664	84750	Hs.458713	NM_032664	ENSG00000172728	FUT10	FUCTX	fucosyltransferase 10	protein-coding	16	3.88	4.12371134	7.91E-05
chr8-1473	chr8	41161047	41162680	+	22.4	1633	"intron (NM_003012, intron 1 of 2)"	"intron (NM_003012, intron 1 of 2)"	5127	NM_003012	6422	Hs.213424	NM_003012	ENSG00000104332	SFRP1	FRP|FRP-1|FRP1|FrzA|SARP2	secreted frizzled related protein 1	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr8-1474	chr8	41259310	41260310	+	16	1000	Intergenic	Intergenic	-88271	NM_016099	51125	Hs.654773	NM_016099	ENSG00000147533	GOLGA7	GCP16|GOLGA3AP1|GOLGA7A|HSPC041	golgin A7	protein-coding	16	3.4	4.705882353	2.25E-05
chr8-1475	chr8	41503087	41504941	+	29.4	1854	"exon (NM_152568, exon 2 of 2)"	"exon (NM_152568, exon 2 of 2)"	864	NM_152568	157848		NM_152568	ENSG00000165066	NKX6-3	NKX6.3	NK6 homeobox 3	protein-coding	29.44	4.85	6.070103093	2.13E-11
chr8-1481	chr8	41704509	41705509	+	16	1000	"intron (NM_001142446, intron 1 of 42)"	"intron (NM_001142446, intron 1 of 42)"	49271	NM_001142446	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding	16	1.46	10.95890411	3.44E-09
chr8-1482	chr8	47020599	47028667	+	131.9	8068	Intergenic	GSAT|Satellite|centr	-727875	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	131.86	24.75	5.327676768	1.56E-40
chr8-1488	chr8	47086461	47087738	+	18.6	1277	Intergenic	GSAT|Satellite|centr	-665409	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	18.56	0.97	19.13402062	1.12E-13
chr8-1493	chr8	47139650	47140650	+	14.7	1000	Intergenic	GSAT|Satellite|centr	-612358	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr8-1495	chr8	47156988	47157988	+	14.7	1000	Intergenic	GSAT|Satellite|centr	-595020	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr8-1499	chr8	47343678	47346839	+	52.5	3161	Intergenic	GSAT|Satellite|centr	-407250	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	52.49	6.8	7.719117647	8.94E-23
chr8-1501	chr8	47353794	47354794	+	15.4	1000	Intergenic	GSAT|Satellite|centr	-398214	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr8-1502	chr8	49053044	49054044	+	16	1000	Intergenic	Intergenic	132549	NM_003350	7336	Hs.491695	NM_003350	ENSG00000169139	UBE2V2	DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2	ubiquitin conjugating enzyme E2 V2	protein-coding	16	3.88	4.12371134	7.91E-05
chr8-1504	chr8	49758104	49759104	+	16.6	1000	Intergenic	L1MC4a|LINE|L1	75395	NM_003068	6591	Hs.360174	NM_003068	ENSG00000019549	SNAI2	SLUG|SLUGH|SLUGH1|SNAIL2|WS2D	snail family transcriptional repressor 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr8-1506	chr8	55090842	55093870	+	41	3028	Intergenic	MER31A|LTR|ERV1	44575	NM_014175	29088	Hs.18349	NM_014175	ENSG00000137547	MRPL15	HSPC145|L15mt|MRP-L15|MRP-L7|RPML7	mitochondrial ribosomal protein L15	protein-coding	40.97	3.88	10.55927835	5.31E-22
chr8-1507	chr8	55184977	55185977	+	14.1	1000	Intergenic	Intergenic	137696	NM_014175	29088	Hs.18349	NM_014175	ENSG00000137547	MRPL15	HSPC145|L15mt|MRP-L15|MRP-L7|RPML7	mitochondrial ribosomal protein L15	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr8-1508	chr8	58800702	58801702	+	16.6	1000	Intergenic	L1ME3D|LINE|L1	-89715	NR_130934	100505477	Hs.434693	NR_130934	ENSG00000205293	LINC01602	T1560	long intergenic non-protein coding RNA 1602	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr8-151	chr8	37455669	37456927	+	26.2	1258	Intergenic	Intergenic	-77394	NR_121621	100507420	Hs.105962	NR_121620		LINC01605	-	long intergenic non-protein coding RNA 1605	ncRNA	26.24	3.88	6.762886598	1.00E-10
chr8-1514	chr8	62373782	62374782	+	16.6	1000	"intron (NM_173519, intron 5 of 5)"	L1M5|LINE|L1	173757	NM_173519	157807	Hs.591874	NM_173519	ENSG00000177182	CLVS1	CRALBPL|RLBP1L1	clavesin 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr8-1516	chr8	66355533	66356533	+	16	1000	Intergenic	Intergenic	118868	NR_033893	286186	Hs.449427	NR_033893	ENSG00000254081	LINC01299	-	long intergenic non-protein coding RNA 1299	ncRNA	16	2.91	5.498281787	4.98E-06
chr8-1517	chr8	66959094	66960366	+	23	1272	"intron (NM_033105, intron 2 of 5)"	MamRep605|Unknown|Unknown	25939	NM_033105	85479	Hs.491885	NM_033105	ENSG00000147570	DNAJC5B	CSP-beta	DnaJ heat shock protein family (Hsp40) member C5 beta	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr8-1518	chr8	66991352	66992352	+	16.6	1000	"intron (NM_033105, intron 4 of 5)"	L2c|LINE|L2	-47426	NM_184085	84675	Hs.85524	NM_033058	ENSG00000147573	TRIM55	MURF-2|RNF29|muRF2	tripartite motif containing 55	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr8-1519	chr8	67020128	67024659	+	55.7	4531	Intergenic	AluJb|SINE|Alu	-16885	NM_184085	84675	Hs.85524	NM_033058	ENSG00000147573	TRIM55	MURF-2|RNF29|muRF2	tripartite motif containing 55	protein-coding	55.69	12.62	4.412836767	6.03E-15
chr8-1520	chr8	67237006	67238006	+	16	1000	Intergenic	L1MEg|LINE|L1	103706	NR_040434	100505676	Hs.121613	NM_001242759	ENSG00000246145	RRS1-AS1	-	RRS1 antisense RNA 1 (head to head)	ncRNA	16	3.88	4.12371134	7.91E-05
chr8-1521	chr8	67274569	67275569	+	16	1000	Intergenic	AluSc|SINE|Alu	66143	NR_040434	100505676	Hs.121613	NM_001242759	ENSG00000246145	RRS1-AS1	-	RRS1 antisense RNA 1 (head to head)	ncRNA	16	2.43	6.58436214	7.90E-07
chr8-1526	chr8	70570680	70571680	+	15.4	1000	"non-coding (NR_132437, exon 17 of 17)"	"non-coding (NR_132437, exon 17 of 17)"	66045	NR_132437	23213	Hs.409602	NM_015170	ENSG00000137573	SULF1	SULF-1	sulfatase 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr8-1527	chr8	70845531	70846531	+	16.6	1000	Intergenic	MIRc|SINE|MIR	-98732	NM_030958	81796	Hs.152460	NM_030958	ENSG00000137571	SLCO5A1	OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15	solute carrier organic anion transporter family member 5A1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr8-1528	chr8	73449723	73450723	+	16	1000	"intron (NM_004770, intron 1 of 2)"	"intron (NM_004770, intron 1 of 2)"	597	NM_004770	9312	Hs.661102	NM_004770	ENSG00000182674	KCNB2	KV2.2	potassium voltage-gated channel subfamily B member 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr8-1529	chr8	73699774	73700774	+	16	1000	"intron (NM_004770, intron 2 of 2)"	MIR|SINE|MIR	55994	NR_110656	101926908	Hs.680588	NR_110656	ENSG00000253726	LOC101926908	-	uncharacterized LOC101926908	ncRNA	16	2.91	5.498281787	4.98E-06
chr8-1531	chr8	74005691	74006691	+	16	1000	promoter-TSS (NM_153225)	promoter-TSS (NM_153225)	-684	NM_153225	157869	Hs.439040	NM_153225	ENSG00000164764	SBSPON	C8orf84|RPESP	somatomedin B and thrombospondin type 1 domain containing	protein-coding	16	3.4	4.705882353	2.25E-05
chr8-1532	chr8	80679040	80680040	+	16	1000	promoter-TSS (NM_001282851)	promoter-TSS (NM_001282851)	558	NM_012258	23462	Hs.234434	NM_012258	ENSG00000164683	HEY1	BHLHb31|CHF2|HERP2|HESR1|HRT-1|OAF1|hHRT1	hes related family bHLH transcription factor with YRPW motif 1	protein-coding	16	3.4	4.705882353	2.25E-05
chr8-1544	chr8	95068828	95070088	+	19.2	1260	Intergenic	MER74A|LTR|ERVL	140179	NM_001161781	54704	Hs.22265	NM_018444	ENSG00000164951	PDP1	PDH|PDP|PDPC|PPM2A|PPM2C	pyruvate dehyrogenase phosphatase catalytic subunit 1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr8-1547	chr8	96356016	96357381	+	22.4	1365	"intron (NR_038209, intron 2 of 3)"	"intron (NR_038209, intron 2 of 3)"	-75236	NM_177965	157657	Hs.548157	NM_177965	ENSG00000156172	C8orf37	BBS21|CORD16|RP64|smalltalk	chromosome 8 open reading frame 37	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr8-1548	chr8	96367289	96369681	+	33.9	2392	"intron (NR_038209, intron 2 of 3)"	MLT1L|LTR|ERVL-MaLR	-87023	NM_177965	157657	Hs.548157	NM_177965	ENSG00000156172	C8orf37	BBS21|CORD16|RP64|smalltalk	chromosome 8 open reading frame 37	protein-coding	33.92	5.34	6.352059925	6.04E-13
chr8-1553	chr8	97215985	97216985	+	16.6	1000	Intergenic	Intergenic	31377	NM_001254752	7381	Hs.131255	NM_006294	ENSG00000156467	UQCRB	MC3DN3|QCR7|QP-C|QPC|UQBC|UQBP|UQCR6|UQPC	ubiquinol-cytochrome c reductase binding protein	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr8-1554	chr8	98318780	98319780	+	16	1000	"intron (NR_125390, intron 2 of 2)"	"intron (NR_125390, intron 2 of 2)"	-29104	NM_033512	85453	Hs.173094	NM_033512	ENSG00000180543	TSPYL5	-	TSPY like 5	protein-coding	16	3.88	4.12371134	7.91E-05
chr8-1555	chr8	98628947	98629947	+	15.4	1000	Intergenic	Intergenic	-26960	NM_178812	92140	Hs.377155	NM_178812	ENSG00000147649	MTDH	3D3|AEG-1|AEG1|LYRIC|LYRIC/3D3	metadherin	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr8-1556	chr8	98842080	98843080	+	14.7	1000	"intron (NM_018407, intron 6 of 6)"	HERVH-int|LTR|ERV1	-38669	NM_030583	4147	Hs.189445	NM_002380	ENSG00000132561	MATN2	-	matrilin 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr8-1557	chr8	99303292	99306629	+	47.4	3337	"intron (NM_024759, intron 1 of 11)"	AT_rich|Low_complexity|Low_complexity	1661	NR_135745	79815	Hs.309489	NM_024759	ENSG00000104361	NIPAL2	NPAL2	NIPA like domain containing 2	protein-coding	47.37	8.74	5.419908467	6.98E-16
chr8-1562	chr8	101832881	101833881	+	16	1000	Intergenic	Intergenic	-99066	NM_002568	26986	Hs.387804	NM_002568	ENSG00000070756	PABPC1	PAB1|PABP|PABP1|PABPC2|PABPL1	poly(A) binding protein cytoplasmic 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr8-1563	chr8	101915074	101916074	+	16.6	1000	Intergenic	Intergenic	47225	NM_001135702	7534	Hs.492407	NM_003406	ENSG00000164924	YWHAZ	14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|YWHAD	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr8-1566	chr8	102613922	102614922	+	16	1000	"intron (NM_001330593, intron 8 of 15)"	"intron (NM_001330593, intron 8 of 15)"	109754	NM_024915	79977	Hs.661088	NM_024915	ENSG00000083307	GRHL2	BOM|DFNA28|ECTDS|TFCP2L3	grainyhead like transcription factor 2	protein-coding	16	0	16.4818808	1.26E-14
chr8-1569	chr8	103562642	103563642	+	15.4	1000	promoter-TSS (NM_024410)	promoter-TSS (NM_024410)	-706	NM_024410	4956	Hs.159274	NM_024410	ENSG00000155087	ODF1	CT133|HSPB10|ODF|ODF2|ODF27|ODFP|ODFPG|ODFPGA|ODFPGB|RT7|SODF	outer dense fiber of sperm tails 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr8-157	chr8	143759633	143761794	+	39.7	2161	"intron (NR_033343, intron 1 of 2)"	"intron (NR_033343, intron 1 of 2)"	-1161	NM_005672	8000	Hs.652235	NM_005672	ENSG00000167653	PSCA	PRO232	prostate stem cell antigen	protein-coding	39.69	3.88	10.22938144	5.62E-21
chr8-1570	chr8	104152359	104154298	+	36.5	1939	"intron (NM_001024372, intron 1 of 1)"	CpG	242	NR_027071	157556	Hs.459124	NM_198099	ENSG00000236939	BAALC-AS2	BAALCOS|C8orf56	BAALC antisense RNA 2	ncRNA	36.48	2.43	15.01234568	3.16E-23
chr8-1571	chr8	104205921	104206921	+	16.6	1000	"intron (NM_001024372, intron 1 of 1)"	"intron (NM_001024372, intron 1 of 1)"	-22053	NR_109954	100499183	Hs.654812	NR_034092	ENSG00000247081	BAALC-AS1	-	BAALC antisense RNA 1	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr8-1573	chr8	109027777	109028777	+	16.6	1000	"intron (NM_178565, intron 2 of 5)"	"intron (NM_178565, intron 2 of 5)"	65890	NM_001317942	340419	Hs.444834	NM_178565	ENSG00000147655	RSPO2	CRISTIN2	R-spondin 2	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr8-1574	chr8	116661002	116662002	+	16.6	1000	"intron (NM_001282903, intron 1 of 6)"	"intron (NM_001282903, intron 1 of 6)"	18737	NM_001282902	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr8-1578	chr8	122732371	122733371	+	16	1000	Intergenic	Intergenic	-79241	NM_005328	3037	Hs.159226	NM_005328	ENSG00000170961	HAS2	-	hyaluronan synthase 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr8-1580	chr8	123587127	123588725	+	25.6	1598	Intergenic	Intergenic	-7043	NR_131202	105375734	Hs.628341	NR_131202		LOC105375734	-	uncharacterized LOC105375734	ncRNA	25.6	1.94	13.19587629	4.03E-16
chr8-1585	chr8	124862944	124863944	+	16.6	1000	promoter-TSS (NM_001039112)	promoter-TSS (NM_001039112)	-783	NM_001039112	654463	Hs.632058	NM_001039112	ENSG00000214814	FER1L6	C8ORFK23	fer-1 like family member 6	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr8-1586	chr8	124894720	124895720	+	14.7	1000	"intron (NM_001039112, intron 1 of 40)"	L1MC1|LINE|L1	30993	NM_001039112	654463	Hs.632058	NM_001039112	ENSG00000214814	FER1L6	C8ORFK23	fer-1 like family member 6	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr8-1587	chr8	124969579	124970579	+	16.6	1000	"intron (NM_001039112, intron 2 of 40)"	"intron (NM_001039112, intron 2 of 40)"	82944	NR_040044	439941	Hs.683919	NM_001038706	ENSG00000181171	FER1L6-AS1	C8orf54	FER1L6 antisense RNA 1	ncRNA	16.64	1.46	11.39726027	2.99E-10
chr8-1598	chr8	126779579	126780579	+	16.6	1000	Intergenic	Intergenic	183362	NR_038447	100130231	Hs.729642	NR_038446	ENSG00000245164	LINC00861	-	long intergenic non-protein coding RNA 861	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr8-160	chr8	146050687	146051946	+	25	1259	Intergenic	LTR42|LTR|ERVL	-1587	NM_001282796	7553	Hs.493218	NM_003416	ENSG00000147789	ZNF7	HF.16|KOX4|zf30	zinc finger protein 7	protein-coding	24.96	5.34	4.674157303	9.72E-08
chr8-1605	chr8	128277899	128279170	+	20.5	1271	"intron (NR_117099, intron 1 of 3)"	"intron (NR_117099, intron 1 of 3)"	21652	NR_117099	103021164	Hs.571531	NR_117099		CASC21	CARLo-2|LINC01244	cancer susceptibility candidate 21 (non-protein coding)	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr8-1606	chr8	128370896	128372361	+	23	1465	"intron (NR_117099, intron 3 of 3)"	MIR|SINE|MIR	-41016	NR_109834	101805488	Hs.745578	NR_109834	ENSG00000280997	CCAT2	LINC00873|NCCP1	colon cancer associated transcript 2 (non-protein coding)	ncRNA	23.04	3.88	5.93814433	4.22E-09
chr8-1607	chr8	128432193	128433193	+	15.4	1000	"intron (NR_117100, intron 5 of 5)"	LTR33|LTR|ERVL	4836	NM_001159542	5462	Hs.450254	NM_001159542	ENSG00000212993	POU5F1B	OCT4-PG1|OCT4PG1|OTF3C|OTF3P1|POU5F1P1|POU5F1P4|POU5FLC20|POU5FLC8	POU class 5 homeobox 1B	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr8-1611	chr8	131664095	131665095	+	16.6	1000	Intergenic	Intergenic	-208689	NM_018482	50807	Hs.655552	NM_018482	ENSG00000153317	ASAP1	AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 1"	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr8-1613	chr8	133454270	133455270	+	16.6	1000	"intron (NM_004519, intron 1 of 14)"	L2b|LINE|L2	4739	NM_001204824	3786	Hs.374023	NM_004519	ENSG00000184156	KCNQ3	BFNC2|EBN2|KV7.3	potassium voltage-gated channel subfamily Q member 3	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr8-1615	chr8	133686838	133687838	+	16.6	1000	"non-coding (NR_135911, exon 1 of 9)"	"non-coding (NR_135911, exon 1 of 9)"	349	NR_135911	23639	Hs.591865	NM_012472	ENSG00000129295	LRRC6	CILD19|LRTP|TSLRP	leucine rich repeat containing 6	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr8-1616	chr8	134148679	134149679	+	14.7	1000	Intergenic	Intergenic	-33869	NM_001045556	6503	Hs.75367	NM_006748	ENSG00000155926	SLA	SLA1|SLAP	Src like adaptor	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr8-1619	chr8	134731000	134732000	+	14.1	1000	Intergenic	Intergenic	-35191	NR_134462	105375773	Hs.445172	NR_134462		LOC105375773	-	uncharacterized LOC105375773	ncRNA	14.08	2.43	5.794238683	5.07E-06
chr8-1620	chr8	134911652	134912652	+	16	1000	"intron (NR_125424, intron 3 of 3)"	L1MEb|LINE|L1	13413	NR_125424	101927822	Hs.129114	NR_125424	ENSG00000253593	LOC101927822	-	uncharacterized LOC101927822	ncRNA	16	2.43	6.58436214	7.90E-07
chr8-1622	chr8	139183172	139184172	+	16	1000	"intron (NM_015912, intron 11 of 19)"	L2a|LINE|L2	325393	NM_015912	51059	Hs.126024	NM_015912	ENSG00000147724	FAM135B	C8ORFK32	family with sequence similarity 135 member B	protein-coding	16	3.4	4.705882353	2.25E-05
chr8-1624	chr8	140441537	140442537	+	16.6	1000	Intergenic	L2b|LINE|L2	273262	NR_104210	51305	Hs.493037	NM_001282534	ENSG00000169427	KCNK9	K2p9.1|KT3.2|TASK-3|TASK3	potassium two pore domain channel subfamily K member 9	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr8-1625	chr8	140487803	140489315	+	23.7	1512	Intergenic	Intergenic	226740	NR_104210	51305	Hs.493037	NM_001282534	ENSG00000169427	KCNK9	K2p9.1|KT3.2|TASK-3|TASK3	potassium two pore domain channel subfamily K member 9	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr8-1629	chr8	141802130	141803508	+	20.5	1378	"intron (NM_001316342, intron 11 of 32)"	"intron (NM_001316342, intron 11 of 32)"	-157173	NM_001164623	27161	Hs.743313	NM_012154	ENSG00000123908	AGO2	EIF2C2|Q10	"argonaute 2, RISC catalytic component"	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr8-1631	chr8	141926159	141928841	+	36.5	2682	"intron (NM_001316342, intron 1 of 32)"	GA-rich|Low_complexity|Low_complexity	83912	NM_005607	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding	36.48	8.74	4.173913043	1.05E-09
chr8-1633	chr8	141994530	141995933	+	25.6	1403	"intron (NM_005607, intron 1 of 31)"	AluJb|SINE|Alu	16181	NM_005607	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr8-1634	chr8	142016094	142017094	+	16	1000	Intergenic	Intergenic	-5182	NM_001316342	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr8-1635	chr8	142039312	142041880	+	33.3	2568	Intergenic	Intergenic	-29184	NM_001316342	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding	33.28	4.37	7.615560641	6.77E-15
chr8-1636	chr8	142095045	142096695	+	23	1650	Intergenic	Intergenic	-42850	NM_014957	22898	Hs.18166	NM_014957	ENSG00000105339	DENND3	-	DENN domain containing 3	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr8-1637	chr8	142336214	142337214	+	16	1000	Intergenic	(GGA)n|Simple_repeat|Simple_repeat	-13934	NR_024441	731779	Hs.586414	NR_024441	ENSG00000253595	LINC01300	-	long intergenic non-protein coding RNA 1300	ncRNA	16	1.46	10.95890411	3.44E-09
chr8-1642	chr8	142431229	142432229	+	16.6	1000	"5' UTR (NM_007079, exon 1 of 4)"	"5' UTR (NM_007079, exon 1 of 4)"	241	NM_032611	11156	Hs.43666	NM_007079	ENSG00000184489	PTP4A3	PRL-3|PRL-R|PRL3	"protein tyrosine phosphatase type IVA, member 3"	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr8-1644	chr8	142612478	142613478	+	16	1000	Intergenic	Intergenic	-95648	NR_102364	389690	Hs.689547	NM_207414	ENSG00000226807	MROH5	-	maestro heat like repeat family member 5	protein-coding	16	0.97	16.49484536	3.54E-11
chr8-1645	chr8	142661237	142662842	+	30.1	1605	Intergenic	MER45A|DNA|hAT-Tip100	-144709	NR_102364	389690	Hs.689547	NM_207414	ENSG00000226807	MROH5	-	maestro heat like repeat family member 5	protein-coding	30.08	5.82	5.16838488	6.85E-10
chr8-1646	chr8	142669226	142670226	+	16.6	1000	Intergenic	Intergenic	-152396	NR_102364	389690	Hs.689547	NM_207414	ENSG00000226807	MROH5	-	maestro heat like repeat family member 5	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr8-165	chr8	4851320	4852596	+	23.7	1276	"5' UTR (NM_033225, exon 1 of 70)"	"5' UTR (NM_033225, exon 1 of 70)"	370	NM_033225	64478	Hs.571466	NM_033225	ENSG00000183117	CSMD1	PPP1R24	CUB and Sushi multiple domains 1	protein-coding	23.68	0.97	24.41237113	5.03E-19
chr8-1650	chr8	142844246	142845246	+	16.6	1000	Intergenic	Intergenic	22928	NR_031636	100302147		NR_031636	ENSG00000221768	MIR1302-7	MIRN1302-7|hsa-mir-1302-7	microRNA 1302-7	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr8-1656	chr8	143685072	143686072	+	15.4	1000	Intergenic	Intergenic	10261	NM_015193	23237	Hs.40888	NM_015193	ENSG00000198576	ARC	Arg3.1	activity regulated cytoskeleton associated protein	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr8-1658	chr8	143769214	143770214	+	15.4	1000	Intergenic	PABL_A-int|LTR|ERV1	7840	NM_005672	8000	Hs.652235	NM_005672	ENSG00000167653	PSCA	PRO232	prostate stem cell antigen	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr8-1659	chr8	143783900	143784900	+	15.4	1000	"exon (NM_001160354, exon 3 of 3)"	"exon (NM_001160354, exon 3 of 3)"	2871	NM_001160355	54742	Hs.69517	NM_017527	ENSG00000160886	LY6K	CT97|HSJ001348|URLC10|ly-6K	"lymphocyte antigen 6 complex, locus K"	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr8-1660	chr8	143787045	143788045	+	16	1000	"non-coding (NR_038925, exon 3 of 3)"	"non-coding (NR_038925, exon 3 of 3)"	6016	NM_001160355	54742	Hs.69517	NM_017527	ENSG00000160886	LY6K	CT97|HSJ001348|URLC10|ly-6K	"lymphocyte antigen 6 complex, locus K"	protein-coding	16	2.91	5.498281787	4.98E-06
chr8-1663	chr8	143877597	143881516	+	59.5	3919	Intergenic	Intergenic	-11548	NM_003695	8581	Hs.415762	NM_003695	ENSG00000167656	LY6D	E48|Ly-6D	"lymphocyte antigen 6 complex, locus D"	protein-coding	59.53	4.85	12.2742268	1.88E-33
chr8-1664	chr8	143917535	143918535	+	16	1000	"intron (NM_002066, intron 1 of 3)"	L1MCc|LINE|L1	1818	NM_002066	2765	Hs.661218	NM_002066	ENSG00000104499	GML	LY6DL	glycosylphosphatidylinositol anchored molecule like	protein-coding	16	0.97	16.49484536	3.54E-11
chr8-1665	chr8	143976766	143978294	+	25	1528	Intergenic	LTR2B|LTR|ERV1	-16294	NM_000497	1584	Hs.184927	NM_000497	ENSG00000160882	CYP11B1	CPN1|CYP11B|FHI|P450C11	cytochrome P450 family 11 subfamily B member 1	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr8-1669	chr8	144077606	144078606	+	16	1000	"non-coding (NR_102426, exon 1 of 1)"	"non-coding (NR_102426, exon 1 of 1)"	861	NR_102426	100128627		NR_102426		CDC42P3	-	cell division cycle 42 pseudogene 3	pseudo	16	0.97	16.49484536	3.54E-11
chr8-1677	chr8	145922335	145923335	+	16	1000	Intergenic	L1M5|LINE|L1	-11638	NM_001308208	80728	Hs.148988	NM_025251	ENSG00000147799	ARHGAP39	CrGAP|Vilse	Rho GTPase activating protein 39	protein-coding	16	2.91	5.498281787	4.98E-06
chr8-1680	chr8	511824	513217	+	21.1	1393	Intergenic	MER31-int|LTR|ERV1	-16739	NM_175075	157695	Hs.289293	NM_175075	ENSG00000180190	TDRP	C8orf42|Inm01|TDRP1|TDRP2	testis development related protein	protein-coding	21.12	0.97	21.77319588	2.68E-16
chr8-1684	chr8	881582	882582	+	16	1000	"intron (NM_001346810, intron 2 of 14)"	"intron (NM_001346810, intron 2 of 14)"	193534	NR_134292	401442	Hs.678992	NR_134292	ENSG00000282375	LOC401442	-	uncharacterized LOC401442	ncRNA	16	1.94	8.24742268	7.67E-08
chr8-1687	chr8	1043600	1044873	+	21.8	1273	"intron (NM_001346810, intron 2 of 14)"	"intron (NM_001346810, intron 2 of 14)"	206587	NR_111948	286083	Hs.382131	NR_033895	ENSG00000275427	LOC286083	-	uncharacterized LOC286083	ncRNA	21.76	3.4	6.4	3.73E-09
chr8-1689	chr8	1377510	1378510	+	15.4	1000	"intron (NM_001346810, intron 3 of 14)"	"intron (NM_001346810, intron 3 of 14)"	-71522	NM_001277161	9228	Hs.113287	NM_004745	ENSG00000198010	DLGAP2	DAP2|SAPAP2	DLG associated protein 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr8-1692	chr8	1792177	1794764	+	33.9	2587	"intron (NM_001308153, intron 3 of 29)"	"intron (NM_001308153, intron 3 of 29)"	21328	NM_014629	9639	Hs.98594	NM_014629	ENSG00000104728	ARHGEF10	GEF10|SNCV	Rho guanine nucleotide exchange factor 10	protein-coding	33.92	4.85	6.993814433	7.28E-14
chr8-1698	chr8	2013145	2019994	+	94.7	6849	"intron (NM_003970, intron 6 of 36)"	"intron (NM_003970, intron 6 of 36)"	-8100	NR_106983	102465695		NR_106983	ENSG00000273593	MIR7160	hsa-mir-7160	microRNA 7160	ncRNA	94.73	20.87	4.53905127	1.64E-25
chr8-1703	chr8	2204725	2208210	+	65.3	3485	Intergenic	MIRc|SINE|MIR	181798	NR_106983	102465695		NR_106983	ENSG00000273593	MIR7160	hsa-mir-7160	microRNA 7160	ncRNA	65.29	14.56	4.484203297	6.74E-18
chr8-1714	chr8	4336810	4337810	+	14.1	1000	"intron (NM_033225, intron 2 of 69)"	AluSx3|SINE|Alu	515018	NM_033225	64478	Hs.571466	NM_033225	ENSG00000183117	CSMD1	PPP1R24	CUB and Sushi multiple domains 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr8-1717	chr8	6789490	6790490	+	16	1000	Intergenic	MER67D|LTR|ERV1	5870	NM_001925	1669	Hs.591391	NM_001925	ENSG00000164821	DEFA4	DEF4|HNP-4|HP-4|HP4	defensin alpha 4	protein-coding	16	3.88	4.12371134	7.91E-05
chr8-1718	chr8	6794221	6795221	+	14.7	1000	"intron (NM_001925, intron 1 of 2)"	"intron (NM_001925, intron 1 of 2)"	1139	NM_001925	1669	Hs.591391	NM_001925	ENSG00000164821	DEFA4	DEF4|HNP-4|HP-4|HP4	defensin alpha 4	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr8-1724	chr8	8313516	8317720	+	66.6	4204	Intergenic	Intergenic	-76274	NM_001080826	157285	Hs.583863	NM_001080826	ENSG00000275342	PRAG1	NACK|PEAK2|PRAGMIN|SGK223	PEAK1 related kinase activating pseudokinase 1	protein-coding	66.57	16.02	4.155430712	6.87E-17
chr8-1726	chr8	8374127	8375127	+	15.4	1000	Intergenic	Intergenic	-135283	NM_001080826	157285	Hs.583863	NM_001080826	ENSG00000275342	PRAG1	NACK|PEAK2|PRAGMIN|SGK223	PEAK1 related kinase activating pseudokinase 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr8-1728	chr8	8475795	8476795	+	14.7	1000	Intergenic	MIR3|SINE|MIR	-83371	NM_194284	137075	Hs.183617	NM_194284	ENSG00000253958	CLDN23	CLDNL|hCG1646163	claudin 23	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr8-1736	chr8	10031433	10032433	+	14.7	1000	"intron (NM_001199729, intron 2 of 6)"	"intron (NM_001199729, intron 2 of 6)"	78871	NM_001135671	4482	Hs.490981	NM_012331	ENSG00000175806	MSRA	PMSR	methionine sulfoxide reductase A	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr8-1743	chr8	10771142	10772142	+	15.4	1000	"intron (NM_173683, intron 2 of 2)"	"intron (NM_173683, intron 2 of 2)"	74106	NR_125432	101929229	Hs.129800	NR_125432		LOC101929229	-	uncharacterized LOC101929229	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr8-1748	chr8	11049672	11052682	+	43.5	3010	"intron (NR_138153, intron 1 of 2)"	"intron (NR_138153, intron 1 of 2)"	7698	NR_138152	286046	Hs.657083	NM_173683	ENSG00000171044	XKR6	C8orf21|C8orf5|C8orf7|XRG6	XK related 6	protein-coding	43.53	6.8	6.401470588	8.79E-17
chr8-1750	chr8	11118184	11120524	+	36.5	2340	Intergenic	LTR43B|LTR|ERV1	-22646	NM_015458	66036	Hs.591395	NM_015458	ENSG00000104643	MTMR9	C8orf9|LIP-STYX|MTMR8	myotubularin related protein 9	protein-coding	36.48	3.88	9.402061856	5.49E-18
chr8-1752	chr8	11248995	11250259	+	16.6	1264	"intron (NR_026814, intron 2 of 6)"	AluSx|SINE|Alu	23716	NR_026814	83656	Hs.583896	NM_054017	ENSG00000184608	FAM167A-AS1	C8orf12	FAM167A antisense RNA 1	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr8-1754	chr8	11277972	11278972	+	16	1000	TTS (NM_053279)	TTS (NM_053279)	45804	NM_053279	83648	Hs.124299	NM_053279	ENSG00000154319	FAM167A	C8orf13|D8S265	family with sequence similarity 167 member A	protein-coding	16	1.94	8.24742268	7.67E-08
chr8-1756	chr8	11381415	11382415	+	14.1	1000	"intron (NM_001330465, intron 1 of 11)"	L1ME4a|LINE|L1	30394	NM_001715	640	Hs.146591	NM_001715	ENSG00000136573	BLK	MODY11	"BLK proto-oncogene, Src family tyrosine kinase"	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr8-1762	chr8	11471837	11472837	+	15.4	1000	Intergenic	L2a|LINE|L2	38293	NR_040035	83655	Hs.742430	NR_040035	ENSG00000170983	LINC00208	C8orf14|NCRNA00208|VIR35	long intergenic non-protein coding RNA 208	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr8-1763	chr8	11486322	11487322	+	16	1000	Intergenic	Intergenic	-47606	NM_001308094	2626	Hs.243987	NM_002052	ENSG00000136574	GATA4	ASD2|TACHD|TOF|VSD1	GATA binding protein 4	protein-coding	16	1.94	8.24742268	7.67E-08
chr8-1764	chr8	11514506	11518810	+	67.2	4304	Intergenic	Intergenic	-17770	NM_001308094	2626	Hs.243987	NM_002052	ENSG00000136574	GATA4	ASD2|TACHD|TOF|VSD1	GATA binding protein 4	protein-coding	67.21	11.16	6.022401434	1.96E-23
chr8-1765	chr8	11527090	11528090	+	15.4	1000	Intergenic	L1MA6|LINE|L1	-6838	NM_001308094	2626	Hs.243987	NM_002052	ENSG00000136574	GATA4	ASD2|TACHD|TOF|VSD1	GATA binding protein 4	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr8-1771	chr8	11742486	11743486	+	16	1000	Intergenic	LTR84b|LTR|ERVL	-17327	NM_147782	1508	Hs.520898	NM_001908	ENSG00000164733	CTSB	APPS|CPSB	cathepsin B	protein-coding	16	2.91	5.498281787	4.98E-06
chr8-1774	chr8	11819309	11820309	+	16	1000	Intergenic	Intergenic	12299	NM_001033018	613210	Hs.558285	NM_001033018	ENSG00000205884	DEFB136	DEFB137	defensin beta 136	protein-coding	16	0.97	16.49484536	3.54E-11
chr8-1783	chr8	19948486	19949873	+	19.2	1387	Intergenic	L2a|LINE|L2	91538	NM_001135691	6570	Hs.158322	NM_003053	ENSG00000036565	SLC18A1	CGAT|VAT1|VMAT1	solute carrier family 18 member A1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr8-1784	chr8	19991767	19993182	+	23	1415	Intergenic	AluSx|SINE|Alu	48243	NM_001135691	6570	Hs.158322	NM_003053	ENSG00000036565	SLC18A1	CGAT|VAT1|VMAT1	solute carrier family 18 member A1	protein-coding	23.04	1.94	11.87628866	6.71E-14
chr8-1790	chr8	20704867	20705867	+	15.4	1000	Intergenic	Intergenic	-105777	NR_130773	102467222	Hs.444226	NR_130773	ENSG00000253147	LOC102467222	-	uncharacterized LOC102467222	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr8-1795	chr8	21386975	21387975	+	14.1	1000	Intergenic	L1MEc|LINE|L1	231725	NR_104677	101929172	Hs.128668	NR_104677	ENSG00000254334	LOC101929172	-	uncharacterized LOC101929172	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr8-1796	chr8	21431947	21432947	+	15.4	1000	Intergenic	Intergenic	213899	NM_001495	2675	Hs.441202	NM_001495	ENSG00000168546	GFRA2	GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2	GDNF family receptor alpha 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr8-1799	chr8	21721596	21723384	+	29.4	1788	Intergenic	Intergenic	48729	NM_003974	9046	Hs.71215	NM_003974	ENSG00000147443	DOK2	p56DOK|p56dok-2	docking protein 2	protein-coding	29.44	4.37	6.736842105	2.70E-12
chr8-1800	chr8	21727729	21729327	+	23.7	1598	Intergenic	L2c|LINE|L2	42691	NM_003974	9046	Hs.71215	NM_003974	ENSG00000147443	DOK2	p56DOK|p56dok-2	docking protein 2	protein-coding	23.68	5.82	4.068728522	1.51E-06
chr8-1801	chr8	21758592	21759592	+	15.4	1000	Intergenic	Intergenic	12127	NM_003974	9046	Hs.71215	NM_003974	ENSG00000147443	DOK2	p56DOK|p56dok-2	docking protein 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr8-1805	chr8	22164289	22165289	+	15.4	1000	"intron (NM_001330480, intron 13 of 21)"	AluJo|SINE|Alu	31709	NM_001135721	55124	Hs.614809	NM_018068	ENSG00000197181	PIWIL2	CT80|HILI|PIWIL1L|mili	piwi like RNA-mediated gene silencing 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr8-1807	chr8	22415374	22416374	+	16	1000	"intron (NM_005775, intron 5 of 20)"	"intron (NM_005775, intron 5 of 20)"	6623	NM_005775	10174	Hs.528572	NM_005775	ENSG00000120896	SORBS3	SCAM-1|SCAM1|SH3D4	sorbin and SH3 domain containing 3	protein-coding	16	2.91	5.498281787	4.98E-06
chr8-1808	chr8	22420878	22421878	+	15.4	1000	"intron (NM_005775, intron 7 of 20)"	"intron (NM_005775, intron 7 of 20)"	-1801	NM_001018003	10174	Hs.528572	NM_005775	ENSG00000120896	SORBS3	SCAM-1|SCAM1|SH3D4	sorbin and SH3 domain containing 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr8-1810	chr8	22584958	22588839	+	54.4	3881	"intron (NM_144962, intron 4 of 6)"	"intron (NM_144962, intron 4 of 6)"	-36083	NM_004430	1960	Hs.534313	NM_004430	ENSG00000179388	EGR3	EGR-3|PILOT	early growth response 3	protein-coding	54.41	6.8	8.001470588	1.13E-23
chr8-1815	chr8	22648974	22649974	+	15.4	1000	"intron (NM_144962, intron 4 of 6)"	AluJo|SINE|Alu	-86011	NR_125433	101929237	Hs.677838	NR_125433	ENSG00000248738	LOC101929237	-	uncharacterized LOC101929237	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr8-1829	chr8	23050946	23052581	+	28.2	1635	"intron (NM_003844, intron 9 of 9)"	LOR1-int|LTR|ERV1	-30220	NM_003840	8793	Hs.213467	NM_003840	ENSG00000173530	TNFRSF10D	CD264|DCR2|TRAIL-R4|TRAILR4|TRUNDD	TNF receptor superfamily member 10d	protein-coding	28.16	5.82	4.838487973	3.50E-09
chr8-1832	chr8	23133680	23134680	+	15.4	1000	Intergenic	AluJo|SINE|Alu	-11425	NM_001136108	203069	Hs.458644	NM_001136108	ENSG00000104679	R3HCC1	-	R3H domain and coiled-coil containing 1	protein-coding	15.36	0	15.82260557	1.26E-14
chr8-1834	chr8	23559195	23560195	+	16	1000	TTS (NM_001136271)	TTS (NM_001136271)	4416	NM_001136271	137814	Hs.532654	NM_001136271	ENSG00000180053	NKX2-6	CSX2|CTHM|NKX2F|NKX4-2	NK2 homeobox 6	protein-coding	16	1.94	8.24742268	7.67E-08
chr8-1838	chr8	23763776	23764776	+	14.7	1000	Intergenic	MER44C|DNA|TcMar-Tigger	-51956	NM_003155	6781	Hs.25590	NM_003155	ENSG00000159167	STC1	STC	stanniocalcin 1	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr8-1842	chr8	25803510	25804510	+	14.7	1000	"intron (NM_022659, intron 6 of 15)"	"intron (NM_022659, intron 6 of 15)"	98630	NM_022659	64641	Hs.491292	NM_022659	ENSG00000221818	EBF2	COE2|EBF-2|O/E-3|OE-3	early B-cell factor 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr8-1846	chr8	25953318	25954845	+	25	1527	Intergenic	Intergenic	-51441	NM_022659	64641	Hs.491292	NM_022659	ENSG00000221818	EBF2	COE2|EBF-2|O/E-3|OE-3	early B-cell factor 2	protein-coding	24.96	3.88	6.432989691	6.68E-10
chr8-1848	chr8	26731259	26732259	+	15.4	1000	Intergenic	Intergenic	-6999	NM_000680	148	Hs.52931	NM_000680	ENSG00000120907	ADRA1A	ADRA1C|ADRA1L1|ALPHA1AAR	adrenoceptor alpha 1A	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr8-1853	chr8	27471697	27472697	+	16	1000	"5' UTR (NM_001831, exon 1 of 9)"	"5' UTR (NM_001831, exon 1 of 9)"	131	NM_001831	1191	Hs.436657	NM_001831	ENSG00000120885	CLU	AAG4|APO-J|APOJ|CLI|CLU1|CLU2|KUB1|NA1/NA2|SGP-2|SGP2|SP-40|TRPM-2|TRPM2	clusterin	protein-coding	16	2.43	6.58436214	7.90E-07
chr8-1857	chr8	27719693	27721295	+	25	1602	Intergenic	AluSx|SINE|Alu	23139	NR_036249	100422828		NR_036249	ENSG00000265847	MIR4287	-	microRNA 4287	ncRNA	24.96	2.43	10.27160494	2.59E-13
chr8-1860	chr8	27817309	27818309	+	14.7	1000	"intron (NM_173833, intron 3 of 8)"	AluJo|SINE|Alu	32560	NM_173833	286133	Hs.591833	NM_173833	ENSG00000168079	SCARA5	NET33|Tesr	scavenger receptor class A member 5	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr8-1864	chr8	27924508	27926012	+	21.1	1504	"exon (NM_001010906, exon 6 of 19)"	"exon (NM_001010906, exon 6 of 19)"	16128	NM_001010906	389643	Hs.370129	NM_001010906	ENSG00000189233	NUGGC	C8orf80|HMFN0672|SLIP-GC	"nuclear GTPase, germinal center associated"	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr8-1866	chr8	28269259	28273509	+	60.2	4250	Intergenic	L1MC4|LINE|L1	-27407	NM_018660	55893	Hs.435535	NM_018660	ENSG00000186918	ZNF395	HDBP-2|HDBP2|HDRF-2|PBF|PRF-1|PRF1|Si-1-8-14	zinc finger protein 395	protein-coding	60.17	7.77	7.743886744	6.45E-26
chr8-1867	chr8	28349493	28353848	+	94.7	4355	promoter-TSS (NM_017412)	promoter-TSS (NM_017412)	-52	NM_145866	7976	Hs.40735	NM_017412	ENSG00000104290	FZD3	Fz-3	frizzled class receptor 3	protein-coding	94.73	14.08	6.727982955	6.67E-36
chr8-1873	chr8	29406415	29407415	+	15.4	1000	Intergenic	Intergenic	-198648	NM_001394	1846	Hs.417962	NM_001394	ENSG00000120875	DUSP4	HVH2|MKP-2|MKP2|TYP	dual specificity phosphatase 4	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr8-1875	chr8	29481562	29482562	+	16	1000	Intergenic	Intergenic	123563	NR_026765	619351	Hs.566911	NR_026765	ENSG00000251191	LINC00589	C8orf75	long intergenic non-protein coding RNA 589	ncRNA	16	1.94	8.24742268	7.67E-08
chr8-1876	chr8	29642130	29643130	+	16	1000	"intron (NR_125814, intron 1 of 3)"	"intron (NR_125814, intron 1 of 3)"	36805	NR_125816	101929450	Hs.512440	NR_125814	ENSG00000253490	LINC02099	-	long intergenic non-protein coding RNA 2099	ncRNA	16	2.91	5.498281787	4.98E-06
chr8-1877	chr8	30238309	30239309	+	16	1000	TTS (NR_046205)	TTS (NR_046205)	-3208	NM_001008712	11030	Hs.334587	NM_006867	ENSG00000157110	RBPMS	HERMES	RNA binding protein with multiple splicing	protein-coding	16	2.91	5.498281787	4.98E-06
chr8-1878	chr8	30241136	30244927	+	71	3791	promoter-TSS (NR_046205)	promoter-TSS (NR_046205)	-114	NR_046205	100128750	Hs.126813	NR_046205	ENSG00000254109	RBPMS-AS1	-	RBPMS antisense RNA 1	ncRNA	71.05	11.16	6.366487455	8.17E-26
chr8-1881	chr8	31237534	31238534	+	14.1	1000	Intergenic	Intergenic	-259234	NM_013962	3084	Hs.453951	NM_004495	ENSG00000157168	NRG1	ARIA|GGF|GGF2|HGL|HRG|HRG1|HRGA|MST131|MSTP131|NDF|NRG1-IT2|SMDF	neuregulin 1	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr8-1883	chr8	33185935	33187256	+	20.5	1321	Intergenic	Intergenic	144069	NM_032664	84750	Hs.458713	NM_032664	ENSG00000172728	FUT10	FUCTX	fucosyltransferase 10	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr8-1888	chr8	37655054	37656984	+	33.3	1930	"intron (NM_032777, intron 1 of 18)"	CpG	1618	NM_032777	25960	Hs.274136	NM_032777	ENSG00000020181	ADGRA2	GPR124|TEM5	adhesion G protein-coupled receptor A2	protein-coding	33.28	0	34.28231206	1.90E-38
chr8-1894	chr8	38617004	38618004	+	16	1000	"intron (NM_001330521, intron 1 of 12)"	"intron (NM_001330521, intron 1 of 12)"	-27218	NM_001122824	6867	Hs.279245	NM_006283	ENSG00000147526	TACC1	Ga55	transforming acidic coiled-coil containing protein 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr8-1896	chr8	41296297	41297297	+	15.4	1000	Intergenic	Intergenic	-51284	NM_016099	51125	Hs.654773	NM_016099	ENSG00000147533	GOLGA7	GCP16|GOLGA3AP1|GOLGA7A|HSPC041	golgin A7	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr8-1899	chr8	41561505	41563074	+	28.2	1569	"intron (NM_000037, intron 18 of 42)"	"intron (NM_000037, intron 18 of 42)"	-39485	NM_001142445	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding	28.16	1.94	14.51546392	1.99E-18
chr8-190	chr8	81489759	81491716	+	41.6	1957	Intergenic	C-rich|Low_complexity|Low_complexity	92289	NM_001105539	65986	Hs.591868	NM_023929	ENSG00000205189	ZBTB10	RINZF	zinc finger and BTB domain containing 10	protein-coding	41.61	7.77	5.355212355	1.22E-13
chr8-1903	chr8	41701426	41702426	+	13.4	1000	"intron (NM_001142446, intron 1 of 42)"	"intron (NM_001142446, intron 1 of 42)"	-46786	NM_020476	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr8-1909	chr8	47038369	47047876	+	131.2	9507	Intergenic	GSAT|Satellite|centr	-709386	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	131.22	22.81	5.752740026	8.99E-43
chr8-191	chr8	82397767	82399334	+	26.9	1567	Intergenic	L2a|LINE|L2	-3077	NM_001442	2167	Hs.391561	NM_001442	ENSG00000170323	FABP4	A-FABP|AFABP|ALBP|HEL-S-104|aP2	fatty acid binding protein 4	protein-coding	26.88	5.82	4.618556701	1.71E-08
chr8-1912	chr8	47054837	47056372	+	26.2	1535	Intergenic	GSAT|Satellite|centr	-696904	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	26.24	3.88	6.762886598	1.00E-10
chr8-1926	chr8	49048795	49049795	+	13.4	1000	Intergenic	Intergenic	128300	NM_003350	7336	Hs.491695	NM_003350	ENSG00000169139	UBE2V2	DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2	ubiquitin conjugating enzyme E2 V2	protein-coding	13.44	0	13.84477987	1.16E-11
chr8-1927	chr8	49486332	49487332	+	14.7	1000	"intron (NR_105002, intron 2 of 3)"	"intron (NR_105002, intron 2 of 3)"	22705	NR_105002	101929268	Hs.683934	NR_105002	ENSG00000253608	LOC101929268	-	uncharacterized LOC101929268	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr8-1930	chr8	49771751	49772751	+	15.4	1000	Intergenic	Intergenic	61748	NM_003068	6591	Hs.360174	NM_003068	ENSG00000019549	SNAI2	SLUG|SLUGH|SLUGH1|SNAIL2|WS2D	snail family transcriptional repressor 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr8-1932	chr8	53489237	53490237	+	15.4	1000	Intergenic	Intergenic	-11716	NM_207413	389658	Hs.527111	NM_207413	ENSG00000196711	FAM150A	AUGA|AUGB|UNQ9433	family with sequence similarity 150 member A	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr8-1942	chr8	56818556	56819556	+	15.4	1000	"intron (NM_002350, intron 1 of 12)"	AluSx1|SINE|Alu	26670	NM_002350	4067	Hs.491767	NM_002350	ENSG00000254087	LYN	JTK8|p53Lyn|p56Lyn	"LYN proto-oncogene, Src family tyrosine kinase"	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr8-1947	chr8	62275299	62277601	+	37.8	2302	"intron (NM_173519, intron 2 of 5)"	"intron (NM_173519, intron 2 of 5)"	75925	NM_173519	157807	Hs.591874	NM_173519	ENSG00000177182	CLVS1	CRALBPL|RLBP1L1	clavesin 1	protein-coding	37.76	7.77	4.85971686	1.66E-11
chr8-1950	chr8	64068941	64069941	+	16	1000	Intergenic	Intergenic	11560	NR_102684	101410533	Hs.163027	NR_102684	ENSG00000270673	YTHDF3-AS1	-	YTHDF3 antisense RNA 1 (head to head)	ncRNA	16	3.88	4.12371134	7.91E-05
chr8-1953	chr8	65921900	65922900	+	15.4	1000	Intergenic	Intergenic	170175	NR_038901	552859	Hs.156997	NR_038901	ENSG00000280725	LINC00251	C8orf25|NCRNA00251	long intergenic non-protein coding RNA 251	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr8-1957	chr8	67427354	67429418	+	31.4	2064	"3' UTR (NM_152765, exon 6 of 6)"	"3' UTR (NM_152765, exon 6 of 6)"	22895	NM_152765	254778	Hs.268869	NM_152765	ENSG00000169085	C8orf46	-	chromosome 8 open reading frame 46	protein-coding	31.36	4.37	7.176201373	3.82E-13
chr8-1959	chr8	67638192	67639192	+	16	1000	"intron (NM_001033578, intron 1 of 16)"	"intron (NM_001033578, intron 1 of 16)"	14039	NM_001033578	23678	Hs.613417	NM_013257	ENSG00000104205	SGK3	CISK|SGK2|SGKL	serum/glucocorticoid regulated kinase family member 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr8-1961	chr8	70746284	70748170	+	30.1	1886	promoter-TSS (NM_030958)	promoter-TSS (NM_030958)	72	NM_030958	81796	Hs.152460	NM_030958	ENSG00000137571	SLCO5A1	OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15	solute carrier organic anion transporter family member 5A1	protein-coding	30.08	1.94	15.50515464	1.31E-19
chr8-1962	chr8	70980536	70982019	+	21.1	1483	"intron (NM_024504, intron 2 of 7)"	"intron (NM_024504, intron 2 of 7)"	2285	NM_024504	63978	Hs.736037	NM_024504	ENSG00000147596	PRDM14	PFM11	PR/SET domain 14	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr8-197	chr8	144135830	144137222	+	25	1392	TTS (NM_173687)	TTS (NM_173687)	15900	NM_173687	286122	Hs.660382	NM_173687	ENSG00000177335	C8orf31	-	chromosome 8 open reading frame 31	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr8-1971	chr8	80808229	80809229	+	14.7	1000	Intergenic	MSTB|LTR|ERVL-MaLR	-24757	NR_110954	101927040	Hs.350876	NR_110954	ENSG00000249328	LOC101927040	-	uncharacterized LOC101927040	ncRNA	14.72	0	15.16333034	3.99E-13
chr8-1972	chr8	81123429	81124429	+	12.8	1000	Intergenic	LTR36|LTR|ERV1	-29695	NR_049894	100847056		NR_049894	ENSG00000265588	MIR5708	-	microRNA 5708	ncRNA	12.8	2.43	5.267489712	2.99E-05
chr8-1979	chr8	81824268	81825607	+	20.5	1339	Intergenic	Intergenic	-37921	NM_001033723	619279	Hs.434957	NM_032651	ENSG00000164684	ZNF704	Gig1	zinc finger protein 704	protein-coding	20.48	0.97	21.11340206	2.68E-16
chr8-1983	chr8	82918719	82919719	+	16	1000	Intergenic	Intergenic	-164698	NM_022133	64089	Hs.492121	NM_022133	ENSG00000104497	SNX16	-	sorting nexin 16	protein-coding	16	2.91	5.498281787	4.98E-06
chr8-1984	chr8	86375681	86376681	+	14.7	1000	promoter-TSS (NM_000067)	promoter-TSS (NM_000067)	50	NM_001293675	760	Hs.155097	NM_000067	ENSG00000104267	CA2	CA-II|CAC|CAII|Car2|HEL-76|HEL-S-282	carbonic anhydrase 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr8-1992	chr8	95288482	95289482	+	14.7	1000	Intergenic	MLT1H|LTR|ERVL-MaLR	-14435	NM_005261	2669	Hs.654463	NM_005261	ENSG00000164949	GEM	KIR	GTP binding protein overexpressed in skeletal muscle	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr8-1995	chr8	96447389	96448389	+	15.4	1000	"intron (NR_038207, intron 2 of 2)"	"intron (NR_038207, intron 2 of 2)"	-166427	NM_177965	157657	Hs.548157	NM_177965	ENSG00000156172	C8orf37	BBS21|CORD16|RP64|smalltalk	chromosome 8 open reading frame 37	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr8-1996	chr8	96469817	96470817	+	15.4	1000	"intron (NR_038207, intron 2 of 2)"	"intron (NR_038207, intron 2 of 2)"	-188855	NM_177965	157657	Hs.548157	NM_177965	ENSG00000156172	C8orf37	BBS21|CORD16|RP64|smalltalk	chromosome 8 open reading frame 37	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr8-1999	chr8	96858089	96859359	+	19.2	1270	Intergenic	Intergenic	101852	NR_036611	100500773	Hs.741582	NR_036611		LOC100500773	-	serine and arginine rich splicing factor 3 pseudogene	pseudo	19.2	3.88	4.948453608	7.67E-07
chr8-2004	chr8	101229655	101230655	+	16	1000	"intron (NM_172218, intron 12 of 18)"	AluSz6|SINE|Alu	59592	NM_003114	6674	Hs.591866	NM_003114	ENSG00000104450	SPAG1	CILD28|CT140|HEL-S-268|HSD-3.8|SP75|TPIS	sperm associated antigen 1	protein-coding	16	1.46	10.95890411	3.44E-09
chr8-2005	chr8	101446766	101447766	+	14.7	1000	Intergenic	MER5A|DNA|hAT-Charlie	52275	NR_039681	100616451		NR_039681	ENSG00000265599	MIR4471	-	microRNA 4471	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr8-2006	chr8	101589393	101590393	+	16	1000	"intron (NM_152628, intron 12 of 13)"	LTR33|LTR|ERVL	-17879	NM_001270377	157567	Hs.530199	NM_198401	ENSG00000186106	ANKRD46	ANK-S|GENX-115279	ankyrin repeat domain 46	protein-coding	16	3.4	4.705882353	2.25E-05
chr8-2009	chr8	102465092	102466092	+	14.7	1000	Intergenic	AluSx4|SINE|Alu	-39075	NM_001330593	79977	Hs.661088	NM_024915	ENSG00000083307	GRHL2	BOM|DFNA28|ECTDS|TFCP2L3	grainyhead like transcription factor 2	protein-coding	14.72	0	15.16333034	3.99E-13
chr8-2010	chr8	102514041	102515041	+	15.4	1000	"intron (NM_001330593, intron 1 of 15)"	"intron (NM_001330593, intron 1 of 15)"	9873	NM_024915	79977	Hs.661088	NM_024915	ENSG00000083307	GRHL2	BOM|DFNA28|ECTDS|TFCP2L3	grainyhead like transcription factor 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr8-2013	chr8	102715446	102716446	+	16	1000	"intron (NM_001040624, intron 6 of 7)"	L1MEc|LINE|L1	87493	NM_032041	83988	Hs.492427	NM_032041	ENSG00000104490	NCALD	-	neurocalcin delta	protein-coding	16	1.46	10.95890411	3.44E-09
chr8-2014	chr8	103140683	103141683	+	15.4	1000	Intergenic	Intergenic	3523	NR_049859	100847001		NR_049859	ENSG00000266756	MIR5680	-	microRNA 5680	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr8-2015	chr8	103175315	103176828	+	24.3	1513	Intergenic	Intergenic	38411	NR_049859	100847001		NR_049859	ENSG00000266756	MIR5680	-	microRNA 5680	ncRNA	24.32	2.43	10.00823045	2.59E-13
chr8-2017	chr8	117241788	117242788	+	15.4	1000	"intron (NR_046215, intron 4 of 13)"	"intron (NR_046215, intron 4 of 13)"	95009	NR_046215	100859921	Hs.552281	NR_046215	ENSG00000249917	LINC00536	-	long intergenic non-protein coding RNA 536	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr8-2018	chr8	117299842	117300842	+	14.7	1000	"intron (NR_046215, intron 1 of 13)"	"intron (NR_046215, intron 1 of 13)"	36955	NR_046215	100859921	Hs.552281	NR_046215	ENSG00000249917	LINC00536	-	long intergenic non-protein coding RNA 536	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr8-202	chr8	2242741	2244057	+	28.8	1316	Intergenic	Intergenic	218730	NR_106983	102465695		NR_106983	ENSG00000273593	MIR7160	hsa-mir-7160	microRNA 7160	ncRNA	28.8	3.88	7.422680412	1.97E-12
chr8-2021	chr8	121822375	121823795	+	19.2	1420	"intron (NM_021021, intron 1 of 6)"	"intron (NM_021021, intron 1 of 6)"	1224	NM_021021	6641	Hs.46701	NM_021021	ENSG00000172164	SNTB1	59-DAP|A1B|BSYN2|DAPA1B|SNT2|SNT2B1|TIP-43	syntrophin beta 1	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr8-2023	chr8	122651491	122652491	+	15.4	1000	"non-coding (NR_002835, exon 1 of 4)"	"non-coding (NR_002835, exon 1 of 4)"	405	NR_002835	594842	Hs.668686	NR_002835		HAS2-AS1	HAS2-AS|HAS2AS|HASNT|NCRNA00077	HAS2 antisense RNA 1	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr8-2024	chr8	123619578	123620578	+	15.4	1000	Intergenic	Intergenic	-39195	NR_131202	105375734	Hs.628341	NR_131202		LOC105375734	-	uncharacterized LOC105375734	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr8-2027	chr8	124194669	124195669	+	14.7	1000	"exon (NM_207006, exon 2 of 6)"	"exon (NM_207006, exon 2 of 6)"	577	NM_001288587	84985	Hs.379821	NM_032899	ENSG00000147689	FAM83A	BJ-TSA-9	family with sequence similarity 83 member A	protein-coding	14.72	0	15.16333034	3.99E-13
chr8-2029	chr8	124287318	124288318	+	14.1	1000	promoter-TSS (NR_037873)	promoter-TSS (NR_037873)	-37	NR_037873	11244	Hs.521800	NM_007222	ENSG00000165156	ZHX1	-	zinc fingers and homeoboxes 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr8-2031	chr8	124557253	124558253	+	16	1000	Intergenic	MIR|SINE|MIR	-4260	NM_001242463	114907	Hs.403933	NM_058229	ENSG00000156804	FBXO32	Fbx32|MAFbx	F-box protein 32	protein-coding	16	0.97	16.49484536	3.54E-11
chr8-2032	chr8	124569314	124570314	+	16	1000	Intergenic	AluJb|SINE|Alu	-16321	NM_001242463	114907	Hs.403933	NM_058229	ENSG00000156804	FBXO32	Fbx32|MAFbx	F-box protein 32	protein-coding	16	2.91	5.498281787	4.98E-06
chr8-2033	chr8	124645919	124646919	+	15.4	1000	Intergenic	Intergenic	18771	NM_001081675	340359	Hs.450252	NM_001081675	ENSG00000175946	KLHL38	C8ORFK36	kelch like family member 38	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr8-2036	chr8	124709895	124710895	+	14.7	1000	"intron (NM_004306, intron 4 of 10)"	"intron (NM_004306, intron 4 of 10)"	39271	NM_004306	312	Hs.181107	NM_004306	ENSG00000104537	ANXA13	ANX13|ISA	annexin A13	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr8-2037	chr8	124730382	124731382	+	15.4	1000	"intron (NM_004306, intron 1 of 10)"	"intron (NM_004306, intron 1 of 10)"	18784	NM_004306	312	Hs.181107	NM_004306	ENSG00000104537	ANXA13	ANX13|ISA	annexin A13	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr8-2038	chr8	124745608	124746608	+	15.4	1000	"intron (NM_004306, intron 1 of 10)"	MER5B|DNA|hAT-Charlie	3558	NM_004306	312	Hs.181107	NM_004306	ENSG00000104537	ANXA13	ANX13|ISA	annexin A13	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr8-2039	chr8	124772706	124773706	+	15.4	1000	Intergenic	Intergenic	-7473	NM_001317917	157769	Hs.459174	NM_144963	ENSG00000176853	FAM91A1	-	family with sequence similarity 91 member A1	protein-coding	15.36	0	15.82260557	1.26E-14
chr8-2040	chr8	124924834	124925834	+	15.4	1000	"intron (NM_001039112, intron 1 of 40)"	"intron (NM_001039112, intron 1 of 40)"	61107	NM_001039112	654463	Hs.632058	NM_001039112	ENSG00000214814	FER1L6	C8ORFK23	fer-1 like family member 6	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr8-2041	chr8	125022821	125023821	+	15.4	1000	"intron (NM_001039112, intron 14 of 40)"	L2c|LINE|L2	29702	NR_040044	439941	Hs.683919	NM_001038706	ENSG00000181171	FER1L6-AS1	C8orf54	FER1L6 antisense RNA 1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr8-2042	chr8	125072072	125073733	+	27.5	1661	"non-coding (NR_103547, exon 2 of 5)"	"non-coding (NR_103547, exon 2 of 5)"	-19879	NR_040044	439941	Hs.683919	NM_001038706	ENSG00000181171	FER1L6-AS1	C8orf54	FER1L6 antisense RNA 1	ncRNA	27.52	1.94	14.18556701	2.90E-17
chr8-2044	chr8	125388259	125389259	+	15.4	1000	Intergenic	Intergenic	-3819	NM_194291	157378	Hs.187646	NM_194291	ENSG00000164983	TMEM65	-	transmembrane protein 65	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr8-2046	chr8	125657594	125659002	+	21.1	1408	"intron (NM_014751, intron 3 of 13)"	"intron (NM_014751, intron 3 of 13)"	82450	NM_001282971	9788	Hs.336994	NM_014751	ENSG00000170873	MTSS1	MIM|MIMA|MIMB	"MTSS1, I-BAR domain containing"	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr8-2049	chr8	126003705	126004705	+	14.1	1000	Intergenic	MLT2B3|LTR|ERVL	6235	NR_134457	105375744	Hs.575534	NR_134457	ENSG00000253513	LOC105375744	-	uncharacterized LOC105375744	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr8-2057	chr8	127381013	127382013	+	15.4	1000	Intergenic	Intergenic	43773	NR_125421	101927657	Hs.552133	NR_125421	ENSG00000244791	LOC101927657	-	uncharacterized LOC101927657	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr8-2059	chr8	127439042	127440042	+	16	1000	Intergenic	Intergenic	101802	NR_125421	101927657	Hs.552133	NR_125421	ENSG00000244791	LOC101927657	-	uncharacterized LOC101927657	ncRNA	16	0.97	16.49484536	3.54E-11
chr8-2061	chr8	128628242	128629242	+	16	1000	Intergenic	Intergenic	117471	NR_117102	100270680	Hs.333720	NR_117101	ENSG00000249375	CASC11	CARLo-7|LINC00990|TCONS_00014535	cancer susceptibility candidate 11 (non-protein coding)	ncRNA	16	2.91	5.498281787	4.98E-06
chr8-2069	chr8	131962087	131963087	+	16	1000	"intron (NM_001115, intron 3 of 17)"	MLT1N2|LTR|ERVL-MaLR	90248	NM_001115	114	Hs.591859	NM_001115	ENSG00000155897	ADCY8	AC8|ADCY3|HBAC1	adenylate cyclase 8	protein-coding	16	0.97	16.49484536	3.54E-11
chr8-2070	chr8	133491142	133493077	+	32	1935	"intron (NM_004519, intron 1 of 14)"	"intron (NM_004519, intron 1 of 14)"	895	NM_004519	3786	Hs.374023	NM_004519	ENSG00000184156	KCNQ3	BFNC2|EBN2|KV7.3	potassium voltage-gated channel subfamily Q member 3	protein-coding	32	1.46	21.91780822	5.41E-25
chr8-2073	chr8	134847134	134848134	+	16	1000	Intergenic	Intergenic	-51105	NR_125424	101927822	Hs.129114	NR_125424	ENSG00000253593	LOC101927822	-	uncharacterized LOC101927822	ncRNA	16	1.94	8.24742268	7.67E-08
chr8-2075	chr8	139560122	139561122	+	14.7	1000	Intergenic	Intergenic	-51557	NM_015912	51059	Hs.126024	NM_015912	ENSG00000147724	FAM135B	C8ORFK32	family with sequence similarity 135 member B	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr8-2076	chr8	140275657	140277067	+	18.6	1410	Intergenic	MIRb|SINE|MIR	-350113	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr8-208	chr8	10508880	10509880	+	20.5	1000	"intron (NM_178857, intron 1 of 3)"	Tigger3c|DNA|TcMar-Tigger	3237	NM_178857	94137	Hs.33538	NM_178857	ENSG00000183638	RP1L1	DCDC4B	RP1 like 1	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr8-2080	chr8	140510453	140511453	+	15.4	1000	Intergenic	Intergenic	204346	NR_104210	51305	Hs.493037	NM_001282534	ENSG00000169427	KCNK9	K2p9.1|KT3.2|TASK-3|TASK3	potassium two pore domain channel subfamily K member 9	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr8-209	chr8	10749828	10753136	+	56.3	3308	Intergenic	Intergenic	53946	NR_125432	101929229	Hs.129800	NR_125432		LOC101929229	-	uncharacterized LOC101929229	ncRNA	56.33	8.74	6.445080092	2.41E-21
chr8-2091	chr8	141974537	141975537	+	15.4	1000	"intron (NM_153831, intron 1 of 31)"	"intron (NM_153831, intron 1 of 31)"	36375	NM_005607	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr8-2092	chr8	142006497	142007497	+	16	1000	"intron (NM_005607, intron 1 of 31)"	Tigger1|DNA|TcMar-Tigger	4415	NM_005607	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr8-2097	chr8	142340836	142341836	+	16	1000	Intergenic	Intergenic	-9312	NR_024441	731779	Hs.586414	NR_024441	ENSG00000253595	LINC01300	-	long intergenic non-protein coding RNA 1300	ncRNA	16	1.94	8.24742268	7.67E-08
chr8-2098	chr8	142373213	142377219	+	58.9	4006	"intron (NM_005293, intron 1 of 1)"	L2c|LINE|L2	2149	NM_005293	2843	Hs.152432	NM_005293	ENSG00000204882	GPR20	-	G protein-coupled receptor 20	protein-coding	58.89	8.74	6.73798627	5.39E-23
chr8-2101	chr8	142531116	142534295	+	44.2	3179	Intergenic	MIRb|SINE|MIR	-15375	NR_102364	389690	Hs.689547	NM_207414	ENSG00000226807	MROH5	-	maestro heat like repeat family member 5	protein-coding	44.17	5.34	8.271535581	7.25E-20
chr8-2103	chr8	142619640	142620640	+	15.4	1000	Intergenic	Intergenic	-102810	NR_102364	389690	Hs.689547	NM_207414	ENSG00000226807	MROH5	-	maestro heat like repeat family member 5	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr8-2104	chr8	142695836	142697482	+	25.6	1646	Intergenic	Intergenic	171015	NR_031636	100302147		NR_031636	ENSG00000221768	MIR1302-7	MIRN1302-7|hsa-mir-1302-7	microRNA 1302-7	ncRNA	25.6	3.88	6.597938144	1.00E-10
chr8-2109	chr8	143042389	143044017	+	26.2	1628	Intergenic	AluY|SINE|Alu	36454	NR_130468	100616374		NR_130468	ENSG00000265612	MIR4539	-	microRNA 4539	ncRNA	26.24	4.85	5.410309278	4.26E-09
chr8-2111	chr8	143234317	143235317	+	15.4	1000	Intergenic	Intergenic	-22883	NR_039682	100616268		NR_039682	ENSG00000265247	MIR4472-1	-	microRNA 4472-1	ncRNA	15.36	0	15.82260557	1.26E-14
chr8-2113	chr8	143546975	143547975	+	16	1000	"intron (NM_001702, intron 1 of 29)"	"intron (NM_001702, intron 1 of 29)"	2098	NM_001702	575	Hs.194654	NM_001702	ENSG00000181790	ADGRB1	BAI1|GDAIF	adhesion G protein-coupled receptor B1	protein-coding	16	2.91	5.498281787	4.98E-06
chr8-2114	chr8	143644836	143645836	+	16	1000	Intergenic	CpG	50497	NM_015193	23237	Hs.40888	NM_015193	ENSG00000198576	ARC	Arg3.1	activity regulated cytoskeleton associated protein	protein-coding	16	0	16.4818808	1.26E-14
chr8-212	chr8	11503002	11504002	+	21.1	1000	Intergenic	Intergenic	-30926	NM_001308094	2626	Hs.243987	NM_002052	ENSG00000136574	GATA4	ASD2|TACHD|TOF|VSD1	GATA binding protein 4	protein-coding	21.12	4.85	4.354639175	2.52E-06
chr8-2120	chr8	143801952	143803647	+	23	1695	"intron (NR_038925, intron 1 of 2)"	HERV4_I-int|LTR|ERV1	5592	NR_038925	100288181	Hs.716823	NR_038925	ENSG00000253741	LOC100288181	-	uncharacterized LOC100288181	ncRNA	23.04	4.37	5.272311213	2.46E-08
chr8-2129	chr8	144143773	144144773	+	15.4	1000	Intergenic	L1MEg|LINE|L1	23647	NM_173687	286122	Hs.660382	NM_173687	ENSG00000177335	C8orf31	-	chromosome 8 open reading frame 31	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr8-2131	chr8	144160989	144161989	+	14.7	1000	Intergenic	Intergenic	40863	NM_173687	286122	Hs.660382	NM_173687	ENSG00000177335	C8orf31	-	chromosome 8 open reading frame 31	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr8-2143	chr8	145896029	145899222	+	51.2	3193	"intron (NM_001308208, intron 1 of 10)"	"intron (NM_001308208, intron 1 of 10)"	13572	NM_001308208	80728	Hs.148988	NM_025251	ENSG00000147799	ARHGAP39	CrGAP|Vilse	Rho GTPase activating protein 39	protein-coding	51.21	5.82	8.798969072	3.04E-24
chr8-2150	chr8	468511	469511	+	14.1	1000	"intron (NM_175075, intron 2 of 3)"	MER21C|LTR|ERVL	25834	NM_001256113	157695	Hs.289293	NM_175075	ENSG00000180190	TDRP	C8orf42|Inm01|TDRP1|TDRP2	testis development related protein	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr8-2165	chr8	1023020	1024020	+	15.4	1000	"intron (NM_001346810, intron 2 of 14)"	"intron (NM_001346810, intron 2 of 14)"	227303	NR_111948	286083	Hs.382131	NR_033895	ENSG00000275427	LOC286083	-	uncharacterized LOC286083	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr8-2166	chr8	1082294	1083294	+	14.7	1000	"intron (NM_001346810, intron 2 of 14)"	LTR39|LTR|ERV1	168029	NR_111948	286083	Hs.382131	NR_033895	ENSG00000275427	LOC286083	-	uncharacterized LOC286083	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr8-2169	chr8	1257032	1258032	+	14.1	1000	"intron (NM_001346810, intron 3 of 14)"	L1M4c|LINE|L1	-6709	NR_111948	286083	Hs.382131	NR_033895	ENSG00000275427	LOC286083	-	uncharacterized LOC286083	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr8-2170	chr8	1365293	1366293	+	15.4	1000	"intron (NM_001346810, intron 3 of 14)"	"intron (NM_001346810, intron 3 of 14)"	-83739	NM_001277161	9228	Hs.113287	NM_004745	ENSG00000198010	DLGAP2	DAP2|SAPAP2	DLG associated protein 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr8-2172	chr8	1402951	1403951	+	15.4	1000	"intron (NM_001346810, intron 3 of 14)"	"intron (NM_001346810, intron 3 of 14)"	-46081	NM_001277161	9228	Hs.113287	NM_004745	ENSG00000198010	DLGAP2	DAP2|SAPAP2	DLG associated protein 2	protein-coding	15.36	1.46	10.52054795	3.44E-09
chr8-2175	chr8	1446643	1447643	+	15.4	1000	"intron (NM_001346810, intron 3 of 14)"	"intron (NM_001346810, intron 3 of 14)"	-2389	NM_001277161	9228	Hs.113287	NM_004745	ENSG00000198010	DLGAP2	DAP2|SAPAP2	DLG associated protein 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr8-2177	chr8	1567911	1568911	+	14.7	1000	"intron (NR_103863, intron 2 of 3)"	L2|LINE|L2	1419	NR_103863	100507435	Hs.667133	NR_103863	ENSG00000253267	DLGAP2-AS1	-	DLGAP2 antisense RNA 1	ncRNA	14.72	1.46	10.08219178	3.66E-08
chr8-2178	chr8	1624293	1625293	+	15.4	1000	"intron (NM_004745, intron 8 of 11)"	"intron (NM_004745, intron 8 of 11)"	-54963	NR_103863	100507435	Hs.667133	NR_103863	ENSG00000253267	DLGAP2-AS1	-	DLGAP2 antisense RNA 1	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr8-2184	chr8	1811205	1812205	+	14.7	1000	"intron (NM_014629, intron 4 of 28)"	"intron (NM_014629, intron 4 of 28)"	39563	NM_014629	9639	Hs.98594	NM_014629	ENSG00000104728	ARHGEF10	GEF10|SNCV	Rho guanine nucleotide exchange factor 10	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr8-2185	chr8	1886451	1887706	+	16	1255	"intron (NM_001308153, intron 27 of 29)"	"intron (NM_001308153, intron 27 of 29)"	-32485	NR_126346	104266957	Hs.734498	NR_126346	ENSG00000253696	KBTBD11-OT1	-	KBTBD11 overlapping transcript 1	ncRNA	16	1.94	8.24742268	7.67E-08
chr8-2187	chr8	1975264	1976264	+	14.7	1000	Intergenic	MIR|SINE|MIR	-17394	NM_003970	9172	Hs.443683	NM_003970	ENSG00000036448	MYOM2	TTNAP	myomesin 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr8-2190	chr8	2058987	2059987	+	13.4	1000	"intron (NM_003970, intron 25 of 36)"	"intron (NM_003970, intron 25 of 36)"	34818	NR_106983	102465695		NR_106983	ENSG00000273593	MIR7160	hsa-mir-7160	microRNA 7160	ncRNA	13.44	0.97	13.8556701	8.12E-09
chr8-2197	chr8	2362957	2363957	+	14.7	1000	Intergenic	Intergenic	116996	NR_125423	101927815	Hs.571467	NR_125423	ENSG00000254319	LOC101927815	-	uncharacterized LOC101927815	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr8-2199	chr8	2858491	2859491	+	15.4	1000	"intron (NM_033225, intron 52 of 69)"	"intron (NM_033225, intron 52 of 69)"	-273000	NR_125425	101927815	Hs.571467	NR_125423	ENSG00000254319	LOC101927815	-	uncharacterized LOC101927815	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr8-2204	chr8	3082092	3083092	+	15.4	1000	"intron (NM_033225, intron 27 of 69)"	"intron (NM_033225, intron 27 of 69)"	-496601	NR_125425	101927815	Hs.571467	NR_125423	ENSG00000254319	LOC101927815	-	uncharacterized LOC101927815	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr8-221	chr8	23033746	23034746	+	20.5	1000	Intergenic	Intergenic	-12703	NM_003840	8793	Hs.213467	NM_003840	ENSG00000173530	TNFRSF10D	CD264|DCR2|TRAIL-R4|TRAILR4|TRUNDD	TNF receptor superfamily member 10d	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr8-2211	chr8	6683035	6686070	+	42.9	3035	"intron (NM_207411, intron 2 of 7)"	"intron (NM_207411, intron 2 of 7)"	-8524	NR_045217	100652791	Hs.369771	NR_045217	ENSG00000245857	GS1-24F4.2	-	uncharacterized LOC100652791	ncRNA	42.89	8.74	4.907322654	5.23E-13
chr8-2213	chr8	6689092	6694071	+	78.1	4979	"intron (NM_001289973, intron 1 of 8)"	"intron (NM_001289973, intron 1 of 8)"	-1495	NR_045217	100652791	Hs.369771	NR_045217	ENSG00000245857	GS1-24F4.2	-	uncharacterized LOC100652791	ncRNA	78.09	12.62	6.187797147	5.12E-28
chr8-2217	chr8	8300313	8302169	+	26.2	1856	Intergenic	Intergenic	-61897	NM_001080826	157285	Hs.583863	NM_001080826	ENSG00000275342	PRAG1	NACK|PEAK2|PRAGMIN|SGK223	PEAK1 related kinase activating pseudokinase 1	protein-coding	26.24	1.94	13.5257732	4.03E-16
chr8-222	chr8	25894918	25895918	+	21.1	1000	"intron (NM_022659, intron 5 of 15)"	"intron (NM_022659, intron 5 of 15)"	7222	NM_022659	64641	Hs.491292	NM_022659	ENSG00000221818	EBF2	COE2|EBF-2|O/E-3|OE-3	early B-cell factor 2	protein-coding	21.12	4.37	4.832951945	6.64E-07
chr8-2221	chr8	8351797	8353160	+	19.2	1363	Intergenic	Intergenic	-113134	NM_001080826	157285	Hs.583863	NM_001080826	ENSG00000275342	PRAG1	NACK|PEAK2|PRAGMIN|SGK223	PEAK1 related kinase activating pseudokinase 1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr8-2223	chr8	8532159	8533954	+	26.2	1795	Intergenic	L2a|LINE|L2	-26610	NM_194284	137075	Hs.183617	NM_194284	ENSG00000253958	CLDN23	CLDNL|hCG1646163	claudin 23	protein-coding	26.24	2.43	10.79835391	2.44E-14
chr8-2236	chr8	9721700	9723003	+	17.9	1303	Intergenic	Intergenic	38488	NR_024281	157627	Hs.12513	NR_024281	ENSG00000253230	LINC00599	Rncr3	long intergenic non-protein coding RNA 599	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr8-2237	chr8	9756559	9759137	+	35.2	2578	"intron (NR_024281, intron 2 of 2)"	"intron (NR_024281, intron 2 of 2)"	2991	NR_024281	157627	Hs.12513	NR_024281	ENSG00000253230	LINC00599	Rncr3	long intergenic non-protein coding RNA 599	ncRNA	35.2	5.82	6.048109966	6.75E-13
chr8-2242	chr8	10414888	10415888	+	15.4	1000	Intergenic	Intergenic	32332	NM_001197020	203074	Hs.591394	NM_198464	ENSG00000184647	PRSS55	CT153|T-SP1|TSP1|UNQ9391	"protease, serine 55"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr8-2243	chr8	10426166	10431113	+	68.5	4947	Intergenic	LTR7|LTR|ERV1	45583	NM_001197020	203074	Hs.591394	NM_198464	ENSG00000184647	PRSS55	CT153|T-SP1|TSP1|UNQ9391	"protease, serine 55"	protein-coding	68.49	7.28	9.407967033	9.07E-33
chr8-2247	chr8	10505872	10507180	+	21.1	1308	"intron (NM_178857, intron 1 of 3)"	"intron (NM_178857, intron 1 of 3)"	6091	NM_178857	94137	Hs.33538	NM_178857	ENSG00000183638	RP1L1	DCDC4B	RP1 like 1	protein-coding	21.12	2.43	8.691358025	2.25E-10
chr8-2248	chr8	10711643	10712643	+	15.4	1000	Intergenic	Intergenic	14607	NR_125432	101929229	Hs.129800	NR_125432		LOC101929229	-	uncharacterized LOC101929229	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr8-2254	chr8	10960288	10961644	+	17.9	1356	"intron (NM_173683, intron 1 of 2)"	"intron (NM_173683, intron 1 of 2)"	-36367	NR_134308	101929269	Hs.680442	NR_134308	ENSG00000254839	LOC101929269	-	uncharacterized LOC101929269	ncRNA	17.92	3.4	5.270588235	8.42E-07
chr8-2257	chr8	11013673	11014673	+	14.1	1000	"intron (NR_138153, intron 1 of 2)"	"intron (NR_138153, intron 1 of 2)"	44702	NR_138152	286046	Hs.657083	NM_173683	ENSG00000171044	XKR6	C8orf21|C8orf5|C8orf7|XRG6	XK related 6	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr8-2260	chr8	11228010	11229341	+	20.5	1331	"intron (NR_026814, intron 1 of 6)"	Kanga1b|DNA|TcMar-Tc2	2764	NR_026814	83656	Hs.583896	NM_054017	ENSG00000184608	FAM167A-AS1	C8orf12	FAM167A antisense RNA 1	ncRNA	20.48	0.97	21.11340206	2.68E-16
chr8-2262	chr8	11316890	11320379	+	62.1	3489	"intron (NM_053279, intron 1 of 2)"	"intron (NM_053279, intron 1 of 2)"	5642	NM_053279	83648	Hs.124299	NM_053279	ENSG00000154319	FAM167A	C8orf13|D8S265	family with sequence similarity 167 member A	protein-coding	62.09	8.74	7.104118993	1.11E-24
chr8-2282	chr8	12672263	12673687	+	21.8	1424	"intron (NR_102423, intron 1 of 1)"	"intron (NR_102423, intron 1 of 1)"	-4065	NR_015383	340357	Hs.434302	NR_015383	ENSG00000254813	LOC340357	-	uncharacterized LOC340357	ncRNA	21.76	3.4	6.4	3.73E-09
chr8-2283	chr8	12687136	12689128	+	30.7	1992	Intergenic	AluSq2|SINE|Alu	-19222	NR_015383	340357	Hs.434302	NR_015383	ENSG00000254813	LOC340357	-	uncharacterized LOC340357	ncRNA	30.72	3.88	7.917525773	3.25E-14
chr8-2284	chr8	12709277	12710277	+	14.1	1000	Intergenic	AluSx1|SINE|Alu	-40867	NR_015383	340357	Hs.434302	NR_015383	ENSG00000254813	LOC340357	-	uncharacterized LOC340357	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr8-2287	chr8	12989804	12990804	+	15.4	1000	"intron (NM_182643, intron 5 of 17)"	CpG	505	NM_006094	10395	Hs.134296	NM_006094	ENSG00000164741	DLC1	ARHGAP7|HP|STARD12|p122-RhoGAP	DLC1 Rho GTPase activating protein	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr8-229	chr8	54569077	54570077	+	21.8	1000	Intergenic	Intergenic	186025	NM_213620	51606	Hs.491737	NM_015941	ENSG00000047249	ATP6V1H	CGI-11|MSTP042|NBP1|SFD|SFDalpha|SFDbeta|VMA13	ATPase H+ transporting V1 subunit H	protein-coding	21.76	2.43	8.95473251	2.49E-11
chr8-2291	chr8	17615023	17616023	+	13.4	1000	"intron (NM_001001924, intron 1 of 14)"	"intron (NM_001001924, intron 1 of 14)"	-35439	NM_001166393	57509	Hs.7946	NM_020749	ENSG00000129422	MTUS1	ATBP|ATIP|ICIS|MP44|MTSG1	microtubule associated tumor suppressor 1	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr8-2294	chr8	19006554	19007554	+	15.4	1000	Intergenic	HERV16-int|LTR|ERVL	95978	NR_038919	100128993	Hs.697742	NR_038919		LOC100128993	-	uncharacterized LOC100128993	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr8-2296	chr8	19339044	19340044	+	14.7	1000	"intron (NR_024040, intron 3 of 9)"	"intron (NR_024040, intron 3 of 9)"	120512	NM_001130518	55790	Hs.613729	NM_018371	ENSG00000147408	CSGALNACT1	CSGalNAcT-1|ChGn|beta4GalNAcT	chondroitin sulfate N-acetylgalactosaminyltransferase 1	protein-coding	14.72	0	15.16333034	3.99E-13
chr8-2298	chr8	20238788	20239788	+	14.7	1000	Intergenic	Intergenic	106004	NR_047509	100874051	Hs.385799	NR_047509	ENSG00000253733	LZTS1-AS1	-	LZTS1 antisense RNA 1	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr8-2300	chr8	20275934	20276934	+	13.4	1000	Intergenic	MLT1A0|LTR|ERVL-MaLR	143150	NR_047509	100874051	Hs.385799	NR_047509	ENSG00000253733	LZTS1-AS1	-	LZTS1 antisense RNA 1	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr8-2304	chr8	20347022	20348277	+	18.6	1255	Intergenic	ERV3-16A3_I-int|LTR|ERVL	214365	NR_047509	100874051	Hs.385799	NR_047509	ENSG00000253733	LZTS1-AS1	-	LZTS1 antisense RNA 1	ncRNA	18.56	4.37	4.247139588	1.41E-05
chr8-2311	chr8	20653780	20654780	+	15.4	1000	Intergenic	Intergenic	-156864	NR_130773	102467222	Hs.444226	NR_130773	ENSG00000253147	LOC102467222	-	uncharacterized LOC102467222	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr8-2312	chr8	20835501	20836843	+	16.6	1342	"intron (NR_033894, intron 1 of 4)"	"intron (NR_033894, intron 1 of 4)"	4675	NR_033894	286114	Hs.651884	NR_033894	ENSG00000253199	LINC02153	-	long intergenic non-protein coding RNA 2153	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr8-2316	chr8	21303465	21304465	+	14.1	1000	Intergenic	Intergenic	148215	NR_104677	101929172	Hs.128668	NR_104677	ENSG00000254334	LOC101929172	-	uncharacterized LOC101929172	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr8-2318	chr8	21312831	21313831	+	14.1	1000	Intergenic	MER2B|DNA|TcMar-Tigger	157581	NR_104677	101929172	Hs.128668	NR_104677	ENSG00000254334	LOC101929172	-	uncharacterized LOC101929172	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr8-2319	chr8	21354658	21357616	+	46.7	2958	Intergenic	MER103C|DNA|hAT-Charlie	200387	NR_104677	101929172	Hs.128668	NR_104677	ENSG00000254334	LOC101929172	-	uncharacterized LOC101929172	ncRNA	46.73	8.74	5.346681922	3.81E-15
chr8-232	chr8	97163770	97171144	+	112	7374	"intron (NM_001001557, intron 1 of 1)"	"intron (NM_001001557, intron 1 of 1)"	5563	NM_001001557	392255	Hs.492277	NM_001001557	ENSG00000156466	GDF6	BMP-13|BMP13|CDMP2|KFM|KFS|KFS1|KFSL|SGM1	growth differentiation factor 6	protein-coding	112.01	14.56	7.692994505	4.60E-46
chr8-2321	chr8	21454558	21455558	+	14.7	1000	Intergenic	L1ME1|LINE|L1	191288	NM_001495	2675	Hs.441202	NM_001495	ENSG00000168546	GFRA2	GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2	GDNF family receptor alpha 2	protein-coding	14.72	0.49	30.04081633	3.99E-13
chr8-2322	chr8	21469203	21470961	+	28.2	1758	Intergenic	Intergenic	176264	NM_001495	2675	Hs.441202	NM_001495	ENSG00000168546	GFRA2	GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2	GDNF family receptor alpha 2	protein-coding	28.16	4.85	5.806185567	1.30E-10
chr8-2328	chr8	21549861	21550861	+	13.4	1000	"3' UTR (NM_001165039, exon 7 of 7)"	"3' UTR (NM_001165039, exon 7 of 7)"	95985	NM_001495	2675	Hs.441202	NM_001495	ENSG00000168546	GFRA2	GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2	GDNF family receptor alpha 2	protein-coding	13.44	2.43	5.530864198	2.99E-05
chr8-2330	chr8	21595781	21596781	+	14.1	1000	"intron (NM_001495, intron 4 of 8)"	L2c|LINE|L2	50065	NM_001495	2675	Hs.441202	NM_001495	ENSG00000168546	GFRA2	GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2	GDNF family receptor alpha 2	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr8-2337	chr8	21973876	21974876	+	15.4	1000	"intron (NM_018411, intron 16 of 17)"	"intron (NM_018411, intron 16 of 17)"	-7444	NM_024815	79873	Hs.527101	NM_024815	ENSG00000275074	NUDT18	MTH3	nudix hydrolase 18	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr8-2343	chr8	22142612	22143612	+	15.4	1000	"intron (NM_001330480, intron 6 of 21)"	L1MA7|LINE|L1	10032	NM_001135721	55124	Hs.614809	NM_018068	ENSG00000197181	PIWIL2	CT80|HILI|PIWIL1L|mili	piwi like RNA-mediated gene silencing 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr8-2347	chr8	22557716	22561742	+	67.2	4026	Intergenic	Intergenic	-8914	NM_004430	1960	Hs.534313	NM_004430	ENSG00000179388	EGR3	EGR-3|PILOT	early growth response 3	protein-coding	67.21	14.56	4.616071429	1.47E-18
chr8-2349	chr8	22634585	22635585	+	14.7	1000	"intron (NM_144962, intron 4 of 6)"	"intron (NM_144962, intron 4 of 6)"	-84270	NM_004430	1960	Hs.534313	NM_004430	ENSG00000179388	EGR3	EGR-3|PILOT	early growth response 3	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr8-2350	chr8	22653706	22654706	+	14.1	1000	"intron (NM_144962, intron 4 of 6)"	L1PB4|LINE|L1	-81279	NR_125433	101929237	Hs.677838	NR_125433	ENSG00000248738	LOC101929237	-	uncharacterized LOC101929237	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr8-2352	chr8	22850793	22851793	+	14.7	1000	"intron (NM_001160036, intron 2 of 11)"	"intron (NM_001160036, intron 2 of 11)"	-2068	NM_001160037	23221	Hs.372688	NM_015178	ENSG00000008853	RHOBTB2	DBC2	Rho related BTB domain containing 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr8-2353	chr8	22924527	22925527	+	14.7	1000	promoter-TSS (NR_038873)	promoter-TSS (NR_038873)	-715	NR_038873	286059	Hs.306673	NR_038873	ENSG00000246130	LOC286059	-	"tumor necrosis factor receptor superfamily member 10d, decoy with truncated death domain pseudogene"	pseudo	14.72	2.91	5.058419244	2.67E-05
chr8-2355	chr8	22932774	22934080	+	19.8	1306	"intron (NR_038873, intron 1 of 2)"	"intron (NR_038873, intron 1 of 2)"	-6727	NR_027140	8795	Hs.521456	NM_003842	ENSG00000120889	TNFRSF10B	CD262|DR5|KILLER|KILLER/DR5|TRAIL-R2|TRAILR2|TRICK2|TRICK2A|TRICK2B|TRICKB|ZTNFR9	TNF receptor superfamily member 10b	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr8-2357	chr8	22992165	22993447	+	16.6	1282	TTS (NM_003840)	TTS (NM_003840)	28737	NM_003840	8793	Hs.213467	NM_003840	ENSG00000173530	TNFRSF10D	CD264|DCR2|TRAIL-R4|TRAILR4|TRUNDD	TNF receptor superfamily member 10d	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr8-2364	chr8	23571560	23572848	+	19.8	1288	Intergenic	CpG	-8093	NM_001136271	137814	Hs.532654	NM_001136271	ENSG00000180053	NKX2-6	CSX2|CTHM|NKX2F|NKX4-2	NK2 homeobox 6	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr8-2367	chr8	23976786	23977786	+	14.7	1000	Intergenic	Intergenic	-174267	NM_014265	10863	Hs.174030	NM_014265	ENSG00000042980	ADAM28	ADAM 28|MDC-L|MDCL|eMDC II|eMDCII	ADAM metallopeptidase domain 28	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr8-2369	chr8	24860423	24861423	+	14.7	1000	Intergenic	MIRb|SINE|MIR	-46540	NM_006158	4747	Hs.521461	NM_006158	ENSG00000277586	NEFL	CMT1F|CMT2E|NF-L|NF68|NFL|PPP1R110	neurofilament light	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr8-237	chr8	142354416	142355667	+	22.4	1251	TTS (NR_024441)	TTS (NR_024441)	4393	NR_024441	731779	Hs.586414	NR_024441	ENSG00000253595	LINC01300	-	long intergenic non-protein coding RNA 1300	ncRNA	22.4	0.97	23.09278351	1.19E-17
chr8-2371	chr8	25429939	25430939	+	15.4	1000	Intergenic	Intergenic	113992	NM_001317906	157313	Hs.33366	NM_152562	ENSG00000184661	CDCA2	PPP1R81|Repo-Man	cell division cycle associated 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr8-2373	chr8	25520064	25521064	+	14.7	1000	Intergenic	Intergenic	204117	NM_001317906	157313	Hs.33366	NM_152562	ENSG00000184661	CDCA2	PPP1R81|Repo-Man	cell division cycle associated 2	protein-coding	14.72	0	15.16333034	3.99E-13
chr8-2379	chr8	25814349	25815349	+	16	1000	"intron (NM_022659, intron 6 of 15)"	MIRc|SINE|MIR	87791	NM_022659	64641	Hs.491292	NM_022659	ENSG00000221818	EBF2	COE2|EBF-2|O/E-3|OE-3	early B-cell factor 2	protein-coding	16	3.4	4.705882353	2.25E-05
chr8-238	chr8	144475323	144476323	+	20.5	1000	Intergenic	Intergenic	-24026	NR_126358	104326051	Hs.202140	NR_126358	ENSG00000254338	MAFA-AS1	TCONS_00014882	MAFA antisense RNA 1	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr8-2380	chr8	25888695	25889695	+	14.7	1000	"intron (NM_022659, intron 6 of 15)"	AluSz|SINE|Alu	13445	NM_022659	64641	Hs.491292	NM_022659	ENSG00000221818	EBF2	COE2|EBF-2|O/E-3|OE-3	early B-cell factor 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr8-2383	chr8	25931878	25932878	+	14.7	1000	Intergenic	MSTB1|LTR|ERVL-MaLR	-29738	NM_022659	64641	Hs.491292	NM_022659	ENSG00000221818	EBF2	COE2|EBF-2|O/E-3|OE-3	early B-cell factor 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr8-2386	chr8	26124798	26125798	+	14.7	1000	Intergenic	MIRb|SINE|MIR	-23709	NM_002717	5520	Hs.146339	NM_002717	ENSG00000221914	PPP2R2A	B55A|B55ALPHA|PR52A|PR55A	protein phosphatase 2 regulatory subunit Balpha	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr8-2391	chr8	27087880	27093183	+	79.4	5303	Intergenic	LTR8A|LTR|ERV1	25425	NM_001283053	81551	Hs.201058	NM_030795	ENSG00000015592	STMN4	RB3	stathmin 4	protein-coding	79.37	15.53	5.110753381	3.40E-24
chr8-2393	chr8	27102481	27103481	+	13.4	1000	"intron (NM_030795, intron 1 of 6)"	"intron (NM_030795, intron 1 of 6)"	12975	NM_001283053	81551	Hs.201058	NM_030795	ENSG00000015592	STMN4	RB3	stathmin 4	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr8-2395	chr8	27490059	27495273	+	80.7	5214	"intron (NM_182826, intron 1 of 5)"	"intron (NM_182826, intron 1 of 5)"	1089	NM_016240	51435	Hs.128856	NM_016240	ENSG00000168077	SCARA3	APC7|CSR|CSR1|MSLR1|MSRL1	scavenger receptor class A member 3	protein-coding	80.65	14.56	5.539148352	2.35E-26
chr8-2396	chr8	27505642	27509890	+	58.9	4248	"intron (NM_182826, intron 2 of 5)"	AluJr|SINE|Alu	16189	NM_016240	51435	Hs.128856	NM_016240	ENSG00000168077	SCARA3	APC7|CSR|CSR1|MSLR1|MSRL1	scavenger receptor class A member 3	protein-coding	58.89	7.77	7.579150579	5.01E-25
chr8-2399	chr8	27725675	27732480	+	90.3	6805	"3' UTR (NM_173833, exon 9 of 9)"	"3' UTR (NM_173833, exon 9 of 9)"	14556	NR_036249	100422828		NR_036249	ENSG00000265847	MIR4287	-	microRNA 4287	ncRNA	90.25	17.47	5.165998855	3.50E-27
chr8-2403	chr8	27751016	27753271	+	34.6	2255	"intron (NM_173833, intron 7 of 8)"	"intron (NM_173833, intron 7 of 8)"	-8510	NR_036249	100422828		NR_036249	ENSG00000265847	MIR4287	-	microRNA 4287	ncRNA	34.56	6.8	5.082352941	2.10E-11
chr8-2411	chr8	28337736	28338736	+	14.1	1000	"intron (NM_172366, intron 2 of 8)"	AluSx|SINE|Alu	9599	NM_001258211	157574	Hs.741522	NM_172366	ENSG00000214050	FBXO16	FBX16	F-box protein 16	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr8-2417	chr8	29174434	29175434	+	14.7	1000	Intergenic	HERVK22-int|LTR|ERVK	31388	NM_057158	1846	Hs.417962	NM_001394	ENSG00000120875	DUSP4	HVH2|MKP-2|MKP2|TYP	dual specificity phosphatase 4	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr8-2418	chr8	29207266	29210787	+	55	3521	promoter-TSS (NM_001394)	promoter-TSS (NM_001394)	-759	NM_001394	1846	Hs.417962	NM_001394	ENSG00000120875	DUSP4	HVH2|MKP-2|MKP2|TYP	dual specificity phosphatase 4	protein-coding	55.05	6.8	8.095588235	1.39E-24
chr8-2420	chr8	29432461	29433461	+	14.7	1000	Intergenic	Intergenic	172664	NR_026765	619351	Hs.566911	NR_026765	ENSG00000251191	LINC00589	C8orf75	long intergenic non-protein coding RNA 589	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr8-2422	chr8	30137125	30138690	+	28.2	1565	Intergenic	Intergenic	-104110	NM_001008712	11030	Hs.334587	NM_006867	ENSG00000157110	RBPMS	HERMES	RNA binding protein with multiple splicing	protein-coding	28.16	3.88	7.257731959	1.97E-12
chr8-2424	chr8	30295613	30297193	+	24.3	1580	"intron (NM_001008710, intron 1 of 8)"	AluSx|SINE|Alu	-53486	NR_046205	100128750	Hs.126813	NR_046205	ENSG00000254109	RBPMS-AS1	-	RBPMS antisense RNA 1	ncRNA	24.32	3.4	7.152941176	7.55E-11
chr8-2428	chr8	32979685	32980685	+	14.7	1000	Intergenic	LTR8|LTR|ERV1	350479	NM_032664	84750	Hs.458713	NM_032664	ENSG00000172728	FUT10	FUCTX	fucosyltransferase 10	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr8-2429	chr8	32984336	32985912	+	28.2	1576	Intergenic	Intergenic	345540	NM_032664	84750	Hs.458713	NM_032664	ENSG00000172728	FUT10	FUCTX	fucosyltransferase 10	protein-coding	28.16	3.4	8.282352941	1.50E-13
chr8-2435	chr8	37082955	37083955	+	14.1	1000	"intron (NR_031672, intron 1 of 2).2"	"intron (NR_031672, intron 1 of 2).2"	103984	NR_031672	100302233		NR_031672	ENSG00000221641	MIR1268A	MIR1268|MIRN1268|hsa-mir-1268|hsa-mir-1268a	microRNA 1268a	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr8-2437	chr8	37381384	37382384	+	14.1	1000	Intergenic	Intergenic	-2980	NR_121621	100507420	Hs.105962	NR_121620		LINC01605	-	long intergenic non-protein coding RNA 1605	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr8-2439	chr8	37518894	37519894	+	14.1	1000	Intergenic	Intergenic	-33875	NM_025069	80139	Hs.288042	NM_025069	ENSG00000183779	ZNF703	NLZ1|ZEPPO1|ZNF503L|ZPO1	zinc finger protein 703	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr8-2444	chr8	38411726	38413074	+	17.9	1348	Intergenic	Intergenic	-26220	NM_001303531	389649	Hs.546586	NM_207412	ENSG00000196166	C8orf86	-	chromosome 8 open reading frame 86	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr8-2445	chr8	38423503	38424503	+	14.7	1000	Intergenic	Intergenic	34772	NR_003129	286140	Hs.512071	NR_003129		RNF5P1	-	ring finger protein 5 pseudogene 1	pseudo	14.72	0.49	30.04081633	3.99E-13
chr8-2448	chr8	38481017	38482017	+	14.7	1000	Intergenic	Intergenic	-22742	NR_003129	286140	Hs.512071	NR_003129		RNF5P1	-	ring finger protein 5 pseudogene 1	pseudo	14.72	1.94	7.587628866	6.14E-07
chr8-2451	chr8	39839410	39840410	+	15.4	1000	"intron (NM_194294, intron 4 of 10)"	"intron (NM_194294, intron 4 of 10)"	47436	NM_194294	169355	Hs.676257	NM_194294	ENSG00000188676	IDO2	INDOL1	"indoleamine 2,3-dioxygenase 2"	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr8-2453	chr8	40963143	40964143	+	14.7	1000	Intergenic	L1ME5|LINE|L1	165019	NR_049801	100847068		NR_049801	ENSG00000263372	MIR548AO	-	microRNA 548ao	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr8-2454	chr8	41130476	41131476	+	13.4	1000	"intron (NM_003012, intron 2 of 2)"	AluSx|SINE|Alu	-2314	NR_049801	100847068		NR_049801	ENSG00000263372	MIR548AO	-	microRNA 548ao	ncRNA	13.44	2.43	5.530864198	2.99E-05
chr8-2455	chr8	41143792	41144792	+	15.4	1000	"intron (NM_003012, intron 2 of 2)"	"intron (NM_003012, intron 2 of 2)"	-15630	NR_049801	100847068		NR_049801	ENSG00000263372	MIR548AO	-	microRNA 548ao	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr8-2459	chr8	41566231	41567231	+	14.1	1000	"intron (NM_000037, intron 16 of 42)"	"intron (NM_000037, intron 16 of 42)"	-43927	NM_001142445	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr8-2460	chr8	41596612	41598224	+	24.3	1612	"intron (NM_000037, intron 2 of 42)"	L1MCc|LINE|L1	57722	NM_000037	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding	24.32	4.85	5.01443299	2.27E-08
chr8-2464	chr8	41651044	41652044	+	14.7	1000	"intron (NM_001142446, intron 1 of 42)"	"intron (NM_001142446, intron 1 of 42)"	3596	NM_000037	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr8-2465	chr8	41913161	41914161	+	14.1	1000	"intron (NR_136589, intron 1 of 1)"	L1MEg|LINE|L1	-4117	NM_001305878	7994	Hs.491577	NM_006766	ENSG00000083168	KAT6A	MOZ|MRD32|MYST-3|MYST3|RUNXBP2|ZC2HC6A|ZNF220	lysine acetyltransferase 6A	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr8-2468	chr8	42080405	42081405	+	15.4	1000	Intergenic	MIR3|SINE|MIR	-15663	NM_000930	5327	Hs.491582	NM_000930	ENSG00000104368	PLAT	T-PA|TPA	"plasminogen activator, tissue type"	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr8-2471	chr8	47030582	47033394	+	32.6	2812	Intergenic	GSAT|Satellite|centr	-720520	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	32.64	7.77	4.200772201	7.28E-09
chr8-2476	chr8	47090063	47092132	+	32.6	2069	Intergenic	GSAT|Satellite|centr	-661411	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	32.64	4.85	6.729896907	5.03E-13
chr8-2485	chr8	47162303	47164700	+	41.6	2397	Intergenic	GSAT|Satellite|centr	-589007	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	41.61	3.88	10.7242268	5.31E-22
chr8-2487	chr8	47173923	47175196	+	17.9	1273	Intergenic	GSAT|Satellite|centr	-577949	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	17.92	0.97	18.4742268	1.12E-13
chr8-2490	chr8	47190461	47191461	+	15.4	1000	Intergenic	HERVK9-int|LTR|ERVK	-561547	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr8-2491	chr8	47329947	47333670	+	51.8	3723	Intergenic	GSAT|Satellite|centr	-420700	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	51.85	8.74	5.932494279	3.69E-18
chr8-2493	chr8	47335961	47340516	+	90.3	4555	Intergenic	GSAT|Satellite|centr	-414270	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	90.25	10.68	8.450374532	6.92E-40
chr8-2498	chr8	49582258	49583258	+	15.4	1000	"intron (NR_105002, intron 2 of 3)"	"intron (NR_105002, intron 2 of 3)"	49795	NR_105004	101929217	Hs.547790	NR_105004	ENSG00000253455	LOC101929217	-	uncharacterized LOC101929217	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr8-2499	chr8	53265290	53266290	+	15.4	1000	"intron (NM_014682, intron 2 of 25)"	MIRb|SINE|MIR	56649	NM_014682	9705	Hs.655499	NM_014682	ENSG00000147488	ST18	NZF3|ZC2H2C3|ZC2HC10|ZNF387	"ST18, C2H2C-type zinc finger"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr8-25	chr8	67624561	67627933	+	74.2	3372	"intron (NM_001033578, intron 1 of 16)"	"intron (NM_001033578, intron 1 of 16)"	1594	NM_001033578	23678	Hs.613417	NM_013257	ENSG00000104205	SGK3	CISK|SGK2|SGKL	serum/glucocorticoid regulated kinase family member 3	protein-coding	74.25	11.65	6.373390558	2.36E-27
chr8-2502	chr8	54454290	54455290	+	15.4	1000	Intergenic	Intergenic	-290533	NM_001282904	4986	Hs.106795	NM_000912	ENSG00000082556	OPRK1	K-OR-1|KOR|KOR-1|OPRK	opioid receptor kappa 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr8-2507	chr8	56225224	56226224	+	15.4	1000	"intron (NM_052898, intron 1 of 2)"	"intron (NM_052898, intron 1 of 2)"	142157	NR_027765	100133234	Hs.729852	NR_027765	ENSG00000248522	SBF1P1	-	SET binding factor 1 pseudogene 1	pseudo	15.36	1.94	7.917525773	7.67E-08
chr8-251	chr8	9769693	9772300	+	42.9	2607	Intergenic	Intergenic	-10014	NR_029668	406907		NR_029668	ENSG00000253230	MIR124-1	MIR124A|MIR124A1|MIRN124-1|MIRN124A1|mir-124-1	microRNA 124-1	ncRNA	42.89	7.28	5.891483516	3.82E-15
chr8-2511	chr8	59058987	59059987	+	13.4	1000	"exon (NM_147189, exon 5 of 5)"	"exon (NM_147189, exon 5 of 5)"	125173	NR_105005	101929528	Hs.563551	NR_105005	ENSG00000253281	LOC101929528	-	uncharacterized LOC101929528	ncRNA	13.44	0.97	13.8556701	8.12E-09
chr8-2514	chr8	59392803	59393803	+	14.7	1000	Intergenic	AluSc|SINE|Alu	19417	NM_000780	1581	Hs.1644	NM_000780	ENSG00000167910	CYP7A1	CP7A|CYP7|CYPVII	cytochrome P450 family 7 subfamily A member 1	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr8-2517	chr8	62064851	62065851	+	14.1	1000	Intergenic	MLT1A|LTR|ERVL-MaLR	-135174	NM_173519	157807	Hs.591874	NM_173519	ENSG00000177182	CLVS1	CRALBPL|RLBP1L1	clavesin 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr8-2520	chr8	63857966	63858966	+	14.7	1000	"intron (NR_130764, intron 5 of 6)"	"intron (NR_130764, intron 5 of 6)"	-31954	NR_027378	643763	Hs.491856	NM_001039769	ENSG00000274956	UG0898H09	-	uncharacterized LOC643763	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr8-2522	chr8	64275360	64278186	+	34.6	2826	Intergenic	MIR|SINE|MIR	-101634	NR_125825	102724612	Hs.97639	NR_125825	ENSG00000253894	LOC102724612	-	uncharacterized LOC102724612	ncRNA	34.56	7.77	4.447876448	3.74E-10
chr8-2523	chr8	65489486	65490486	+	15.4	1000	promoter-TSS (NR_015374)	promoter-TSS (NR_015374)	-166	NR_015374	401463	Hs.651960	NR_015374	ENSG00000254102	LOC401463	-	uncharacterized LOC401463	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr8-2524	chr8	65497060	65498458	+	20.5	1398	Intergenic	Intergenic	4964	NM_152414	27319	Hs.388788	NM_152414	ENSG00000180828	BHLHE22	BHLHB5|Beta3|Beta3a|CAGL85|TNRC20	basic helix-loop-helix family member e22	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr8-2526	chr8	66058275	66059275	+	14.1	1000	Intergenic	Intergenic	33800	NR_038901	552859	Hs.156997	NR_038901	ENSG00000280725	LINC00251	C8orf25|NCRNA00251	long intergenic non-protein coding RNA 251	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr8-2532	chr8	67067890	67068890	+	14.1	1000	"intron (NM_033058, intron 10 of 10)"	"intron (NM_033058, intron 10 of 10)"	22490	NM_000756	1392	Hs.75294	NM_000756	ENSG00000147571	CRH	CRF|CRH1	corticotropin releasing hormone	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr8-2534	chr8	67188132	67189132	+	14.7	1000	Intergenic	AluSx1|SINE|Alu	84283	NR_039979	100505659	Hs.529729	NR_039979	ENSG00000253138	LINC00967	-	long intergenic non-protein coding RNA 967	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr8-2547	chr8	70848420	70849420	+	15.4	1000	Intergenic	AluJb|SINE|Alu	-101621	NM_030958	81796	Hs.152460	NM_030958	ENSG00000137571	SLCO5A1	OATP-J|OATP-RP4|OATP5A1|OATPJ|OATPRP4|SLC21A15	solute carrier organic anion transporter family member 5A1	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr8-2551	chr8	73884720	73885720	+	15.4	1000	Intergenic	Intergenic	-35877	NM_017489	7013	Hs.442707	NM_003218	ENSG00000147601	TERF1	PIN2|TRBF1|TRF|TRF1|hTRF1-AS|t-TRF1	telomeric repeat binding factor 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr8-2553	chr8	76315795	76319966	+	64	4171	Intergenic	(TTCA)n|Simple_repeat|Simple_repeat	-2025	NM_001330561	3174	Hs.241529	NM_004133	ENSG00000164749	HNF4G	NR2A2|NR2A3	hepatocyte nuclear factor 4 gamma	protein-coding	64.01	10.68	5.993445693	1.08E-22
chr8-2554	chr8	77485499	77486499	+	14.1	1000	Intergenic	L2b|LINE|L2	-107516	NM_024721	79776	Hs.458973	NM_024721	ENSG00000091656	ZFHX4	ZFH4|ZHF4	zinc finger homeobox 4	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr8-2559	chr8	81313000	81314000	+	15.4	1000	Intergenic	AluSq2|SINE|Alu	-84354	NM_001277145	65986	Hs.591868	NM_023929	ENSG00000205189	ZBTB10	RINZF	zinc finger and BTB domain containing 10	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr8-2563	chr8	81828004	81829004	+	15.4	1000	Intergenic	MLT1N2|LTR|ERVL-MaLR	-41488	NM_001033723	619279	Hs.434957	NM_032651	ENSG00000164684	ZNF704	Gig1	zinc finger protein 704	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr8-2568	chr8	82809947	82810947	+	14.1	1000	Intergenic	LTR7|LTR|ERV1	-55926	NM_022133	64089	Hs.492121	NM_022133	ENSG00000104497	SNX16	-	sorting nexin 16	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr8-2569	chr8	90251563	90253049	+	18.6	1486	Intergenic	HERVIP10FH-int|LTR|ERV1	517633	NR_125822	101929709	Hs.651324	NR_125822	ENSG00000251136	LOC101929709	-	uncharacterized LOC101929709	ncRNA	18.56	0.49	37.87755102	9.96E-18
chr8-2571	chr8	93111922	93116691	+	76.2	4769	"intron (NM_175634, intron 1 of 11)"	CpG	1148	NM_001198633	862	Hs.368431	NM_004349	ENSG00000079102	RUNX1T1	AML1-MTG8|AML1T1|CBFA2T1|CDR|ETO|MTG8|ZMYND2	RUNX1 translocation partner 1	protein-coding	76.17	16.5	4.616363636	7.44E-21
chr8-2572	chr8	94118667	94119667	+	14.7	1000	Intergenic	Intergenic	59912	NM_001242668	389676	Hs.386711	NM_001242668		C8orf87	-	chromosome 8 open reading frame 87	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr8-2575	chr8	95053760	95054760	+	15.4	1000	Intergenic	Intergenic	124981	NM_001161781	54704	Hs.22265	NM_018444	ENSG00000164951	PDP1	PDH|PDP|PDPC|PPM2A|PPM2C	pyruvate dehyrogenase phosphatase catalytic subunit 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr8-258	chr8	11440320	11441597	+	23	1277	Intergenic	Intergenic	6914	NR_040035	83655	Hs.742430	NR_040035	ENSG00000170983	LINC00208	C8orf14|NCRNA00208|VIR35	long intergenic non-protein coding RNA 208	ncRNA	23.04	3.88	5.93814433	4.22E-09
chr8-2583	chr8	96638868	96639868	+	14.1	1000	"intron (NR_038205, intron 2 of 2)"	"intron (NR_038205, intron 2 of 2)"	321208	NR_036611	100500773	Hs.741582	NR_036611		LOC100500773	-	serine and arginine rich splicing factor 3 pseudogene	pseudo	14.08	1.94	7.257731959	6.14E-07
chr8-2587	chr8	97413027	97414027	+	15.4	1000	Intergenic	L1MC3|LINE|L1	-13861	NR_125828	102724804	Hs.571415	NR_125828	ENSG00000253105	LOC102724804	-	uncharacterized LOC102724804	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr8-2588	chr8	98482393	98483393	+	14.1	1000	Intergenic	LTR16C|LTR|ERVL	-24168	NR_125390	101927066	Hs.732112	NR_125390		LOC101927066	-	uncharacterized LOC101927066	ncRNA	14.08	1.94	7.257731959	6.14E-07
chr8-259	chr8	11803952	11805233	+	24.3	1281	Intergenic	LTR16E1|LTR|ERVL	27516	NM_001033018	613210	Hs.558285	NM_001033018	ENSG00000205884	DEFB136	DEFB137	defensin beta 136	protein-coding	24.32	2.91	8.357388316	5.77E-12
chr8-2590	chr8	99195378	99196378	+	15.4	1000	Intergenic	AluJb|SINE|Alu	65810	NM_015029	10940	Hs.252828	NM_015029	ENSG00000104356	POP1	-	"POP1 homolog, ribonuclease P/MRP subunit"	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr8-2594	chr8	101348090	101349090	+	15.4	1000	promoter-TSS (NM_001280539)	promoter-TSS (NM_001280539)	-144	NM_001280539	25897	Hs.292882	NM_015435	ENSG00000034677	RNF19A	RNF19	"ring finger protein 19A, RBR E3 ubiquitin protein ligase"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr8-2600	chr8	101845135	101846135	+	14.1	1000	Intergenic	MER39|LTR|ERV1	-111320	NM_002568	26986	Hs.387804	NM_002568	ENSG00000070756	PABPC1	PAB1|PABP|PABP1|PABPC2|PABPL1	poly(A) binding protein cytoplasmic 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr8-2601	chr8	101856244	101857244	+	14.7	1000	Intergenic	L1ME3A|LINE|L1	106055	NM_001135702	7534	Hs.492407	NM_003406	ENSG00000164924	YWHAZ	14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|YWHAD	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr8-2604	chr8	102659134	102660134	+	14.1	1000	"intron (NM_001330593, intron 13 of 15)"	"intron (NM_001330593, intron 13 of 15)"	143805	NM_032041	83988	Hs.492427	NM_032041	ENSG00000104490	NCALD	-	neurocalcin delta	protein-coding	14.08	0	14.5040551	3.99E-13
chr8-2606	chr8	102849283	102850283	+	14.7	1000	"intron (NM_001040628, intron 4 of 7)"	"intron (NM_001040628, intron 4 of 7)"	-46344	NM_032041	83988	Hs.492427	NM_032041	ENSG00000104490	NCALD	-	neurocalcin delta	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr8-2612	chr8	107836715	107837715	+	14.7	1000	Intergenic	Intergenic	-54743	NM_139166	137735	Hs.374668	NM_139166	ENSG00000174429	ABRA	STARS	actin binding Rho activating protein	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr8-2614	chr8	117180572	117181572	+	14.7	1000	"intron (NR_046215, intron 4 of 13)"	"intron (NR_046215, intron 4 of 13)"	156225	NR_046215	100859921	Hs.552281	NR_046215	ENSG00000249917	LINC00536	-	long intergenic non-protein coding RNA 536	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr8-2617	chr8	120975047	120976047	+	14.1	1000	"intron (NM_022783, intron 3 of 8)"	L2a|LINE|L2	89652	NM_022783	64798	Hs.112981	NM_022783	ENSG00000155792	DEPTOR	DEP.6|DEPDC6	DEP domain containing MTOR interacting protein	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr8-2620	chr8	122359620	122360620	+	15.4	1000	Intergenic	L2c|LINE|L2	-291466	NR_002835	594842	Hs.668686	NR_002835		HAS2-AS1	HAS2-AS|HAS2AS|HASNT|NCRNA00077	HAS2 antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr8-2628	chr8	124598826	124599826	+	15.4	1000	Intergenic	Intergenic	-45833	NM_001242463	114907	Hs.403933	NM_058229	ENSG00000156804	FBXO32	Fbx32|MAFbx	F-box protein 32	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr8-2629	chr8	124637854	124638854	+	14.7	1000	Intergenic	Intergenic	26836	NM_001081675	340359	Hs.450252	NM_001081675	ENSG00000175946	KLHL38	C8ORFK36	kelch like family member 38	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr8-263	chr8	22597397	22601064	+	62.7	3667	"intron (NM_144962, intron 4 of 6)"	"intron (NM_144962, intron 4 of 6)"	-48415	NM_004430	1960	Hs.534313	NM_004430	ENSG00000179388	EGR3	EGR-3|PILOT	early growth response 3	protein-coding	62.73	12.62	4.970681458	5.31E-19
chr8-2633	chr8	125138421	125139421	+	14.1	1000	"intron (NR_103547, intron 1 of 4)"	MIRb|SINE|MIR	44842	NR_103547	157376	Hs.662360	NM_182525	ENSG00000253868	FER1L6-AS2	C8orf78	FER1L6 antisense RNA 2	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr8-2634	chr8	125446633	125447633	+	14.7	1000	Intergenic	AluSx1|SINE|Alu	-15915	NM_017956	55039	Hs.9925	NM_017956	ENSG00000183665	TRMT12	TRM12|TYW2	tRNA methyltransferase 12 homolog	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr8-2638	chr8	125810238	125811238	+	14.7	1000	Intergenic	Intergenic	-23489	NR_039806	100616221		NR_039806	ENSG00000283609	MIR4662A	-	microRNA 4662a	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr8-2645	chr8	126650525	126651525	+	14.1	1000	Intergenic	Intergenic	206574	NM_001282985	10221	Hs.444947	NM_025195	ENSG00000173334	TRIB1	C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1	tribbles pseudokinase 1	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr8-2646	chr8	127019946	127020946	+	14.7	1000	Intergenic	MER9a1|LTR|ERVK	-57005	NR_038446	100130231	Hs.729642	NR_038446	ENSG00000245164	LINC00861	-	long intergenic non-protein coding RNA 861	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr8-2648	chr8	127333214	127334214	+	14.7	1000	Intergenic	L2b|LINE|L2	-4026	NR_125421	101927657	Hs.552133	NR_125421	ENSG00000244791	LOC101927657	-	uncharacterized LOC101927657	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr8-2649	chr8	127398279	127399279	+	14.7	1000	Intergenic	AluSp|SINE|Alu	61039	NR_125421	101927657	Hs.552133	NR_125421	ENSG00000244791	LOC101927657	-	uncharacterized LOC101927657	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr8-2650	chr8	127414392	127415392	+	15.4	1000	Intergenic	MER44A|DNA|TcMar-Tigger	77152	NR_125421	101927657	Hs.552133	NR_125421	ENSG00000244791	LOC101927657	-	uncharacterized LOC101927657	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr8-2652	chr8	128149870	128151120	+	17.9	1250	Intergenic	AT_rich|Low_complexity|Low_complexity	-56029	NR_119373	103164619	Hs.571401	NR_119373	ENSG00000253264	PCAT2	CARLo-4|PCA2|TCONS_00015167	prostate cancer associated transcript 2 (non-protein coding)	ncRNA	17.92	1.46	12.2739726	2.41E-11
chr8-2654	chr8	128548632	128549632	+	14.7	1000	Intergenic	Intergenic	-54748	NR_024393	727677	Hs.673248	NR_024393	ENSG00000246228	CASC8	CARLo-1|LINC00860	cancer susceptibility candidate 8 (non-protein coding)	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr8-2655	chr8	128630936	128632364	+	22.4	1428	Intergenic	Intergenic	114563	NR_117102	100270680	Hs.333720	NR_117101	ENSG00000249375	CASC11	CARLo-7|LINC00990|TCONS_00014535	cancer susceptibility candidate 11 (non-protein coding)	ncRNA	22.4	4.37	5.125858124	1.32E-07
chr8-2659	chr8	131416715	131417715	+	14.1	1000	"intron (NM_001247996, intron 1 of 30)"	"intron (NM_001247996, intron 1 of 30)"	38691	NM_001247996	50807	Hs.655552	NM_018482	ENSG00000153317	ASAP1	AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 1"	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr8-2661	chr8	131589156	131590813	+	26.2	1657	Intergenic	AluY|SINE|Alu	-134078	NM_018482	50807	Hs.655552	NM_018482	ENSG00000153317	ASAP1	AMAP1|CENTB4|DDEF1|PAG2|PAP|ZG14P	"ArfGAP with SH3 domain, ankyrin repeat and PH domain 1"	protein-coding	26.24	2.91	9.017182131	6.53E-13
chr8-2666	chr8	131918567	131919567	+	15.4	1000	"intron (NM_001115, intron 6 of 17)"	"intron (NM_001115, intron 6 of 17)"	133768	NM_001115	114	Hs.591859	NM_001115	ENSG00000155897	ADCY8	AC8|ADCY3|HBAC1	adenylate cyclase 8	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr8-2668	chr8	134127577	134128577	+	14.1	1000	"intron (NM_003235, intron 44 of 47)"	"intron (NM_003235, intron 44 of 47)"	-12767	NM_001045556	6503	Hs.75367	NM_006748	ENSG00000155926	SLA	SLA1|SLAP	Src like adaptor	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr8-2669	chr8	134185952	134186952	+	14.1	1000	Intergenic	L2b|LINE|L2	-16830	NM_080838	8840	Hs.492974	NM_003882	ENSG00000104415	WISP1	CCN4|WISP1c|WISP1i|WISP1tc	WNT1 inducible signaling pathway protein 1	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr8-2671	chr8	134404850	134408025	+	39.7	3175	Intergenic	MIRb|SINE|MIR	-96890	NM_006096	10397	Hs.372914	NM_006096	ENSG00000104419	NDRG1	CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5	N-myc downstream regulated 1	protein-coding	39.69	7.77	5.108108108	6.49E-13
chr8-2673	chr8	134669672	134670672	+	14.7	1000	Intergenic	Intergenic	26137	NR_134463	105375773	Hs.445172	NR_134462		LOC105375773	-	uncharacterized LOC105375773	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr8-2674	chr8	134673036	134674036	+	15.4	1000	Intergenic	Intergenic	22773	NR_134463	105375773	Hs.445172	NR_134462		LOC105375773	-	uncharacterized LOC105375773	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr8-2675	chr8	134827943	134828943	+	13.4	1000	Intergenic	Intergenic	-38848	NR_125422	101927798	Hs.615036	NR_125422	ENSG00000253165	LOC101927798	-	uncharacterized LOC101927798	ncRNA	13.44	1.94	6.927835052	4.51E-06
chr8-2679	chr8	136180521	136181521	+	15.4	1000	Intergenic	Intergenic	-65353	NR_120396	286094	Hs.440978	NR_026706	ENSG00000254083	LINC01591	-	long intergenic non-protein coding RNA 1591	ncRNA	15.36	2.43	6.320987654	7.90E-07
chr8-2681	chr8	136468166	136472157	+	57	3991	"exon (NM_006558, exon 1 of 9)"	"exon (NM_006558, exon 1 of 9)"	453	NM_006558	10656	Hs.444558	NM_006558	ENSG00000131773	KHDRBS3	Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile	"KH RNA binding domain containing, signal transduction associated 3"	protein-coding	56.97	5.34	10.66853933	1.25E-29
chr8-2682	chr8	137030737	137032282	+	24.3	1545	Intergenic	Intergenic	561801	NM_006558	10656	Hs.444558	NM_006558	ENSG00000131773	KHDRBS3	Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile	"KH RNA binding domain containing, signal transduction associated 3"	protein-coding	24.32	2.91	8.357388316	5.77E-12
chr8-2683	chr8	137102865	137103865	+	14.7	1000	Intergenic	L1MA4A|LINE|L1	633657	NM_006558	10656	Hs.444558	NM_006558	ENSG00000131773	KHDRBS3	Etle|SALP|SLM-2|SLM2|T-STAR|TSTAR|etoile	"KH RNA binding domain containing, signal transduction associated 3"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr8-2686	chr8	139884286	139885286	+	15.4	1000	"intron (NM_152888, intron 3 of 64)"	"intron (NM_152888, intron 3 of 64)"	41463	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding	15.36	0	15.82260557	1.26E-14
chr8-2693	chr8	140506132	140508658	+	35.8	2526	Intergenic	Intergenic	207904	NR_104210	51305	Hs.493037	NM_001282534	ENSG00000169427	KCNK9	K2p9.1|KT3.2|TASK-3|TASK3	potassium two pore domain channel subfamily K member 9	protein-coding	35.84	8.74	4.100686499	1.05E-09
chr8-2697	chr8	141698795	141699795	+	14.1	1000	"intron (NM_001316342, intron 26 of 32)"	"intron (NM_001316342, intron 26 of 32)"	-53649	NM_001164623	27161	Hs.743313	NM_012154	ENSG00000123908	AGO2	EIF2C2|Q10	"argonaute 2, RISC catalytic component"	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr8-2698	chr8	141791690	141792690	+	14.7	1000	"intron (NM_001316342, intron 12 of 32)"	"intron (NM_001316342, intron 12 of 32)"	-146544	NM_001164623	27161	Hs.743313	NM_012154	ENSG00000123908	AGO2	EIF2C2|Q10	"argonaute 2, RISC catalytic component"	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr8-2700	chr8	141834320	141835320	+	14.1	1000	"intron (NM_001316342, intron 6 of 32)"	"intron (NM_001316342, intron 6 of 32)"	176592	NM_005607	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr8-2712	chr8	142079723	142080723	+	15.4	1000	Intergenic	Intergenic	-58497	NM_014957	22898	Hs.18166	NM_014957	ENSG00000105339	DENND3	-	DENN domain containing 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr8-2714	chr8	142343899	142344899	+	14.7	1000	Intergenic	Intergenic	-6249	NR_024441	731779	Hs.586414	NR_024441	ENSG00000253595	LINC01300	-	long intergenic non-protein coding RNA 1300	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr8-2716	chr8	142364571	142365571	+	14.7	1000	Intergenic	Intergenic	12294	NM_005293	2843	Hs.152432	NM_005293	ENSG00000204882	GPR20	-	G protein-coupled receptor 20	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr8-2718	chr8	142484734	142485734	+	14.7	1000	"intron (NR_102363, intron 11 of 27)"	"intron (NR_102363, intron 11 of 27)"	32096	NM_207414	389690	Hs.689547	NM_207414	ENSG00000226807	MROH5	-	maestro heat like repeat family member 5	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr8-2720	chr8	142605927	142607748	+	28.2	1821	Intergenic	Intergenic	-89507	NR_102364	389690	Hs.689547	NM_207414	ENSG00000226807	MROH5	-	maestro heat like repeat family member 5	protein-coding	28.16	2.91	9.676975945	7.24E-15
chr8-2722	chr8	142683686	142684686	+	14.1	1000	Intergenic	Intergenic	-166856	NR_102364	389690	Hs.689547	NM_207414	ENSG00000226807	MROH5	-	maestro heat like repeat family member 5	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr8-2727	chr8	142881099	142882099	+	14.7	1000	Intergenic	Intergenic	-13925	NR_031636	100302147		NR_031636	ENSG00000221768	MIR1302-7	MIRN1302-7|hsa-mir-1302-7	microRNA 1302-7	ncRNA	14.72	0	15.16333034	3.99E-13
chr8-2729	chr8	143023357	143025546	+	33.9	2189	Intergenic	Intergenic	55206	NR_130468	100616374		NR_130468	ENSG00000265612	MIR4539	-	microRNA 4539	ncRNA	33.92	4.85	6.993814433	7.28E-14
chr8-2730	chr8	143202818	143203818	+	14.7	1000	Intergenic	Intergenic	-54382	NR_039682	100616268		NR_039682	ENSG00000265247	MIR4472-1	-	microRNA 4472-1	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr8-2731	chr8	143221158	143222158	+	15.4	1000	Intergenic	HAL1|LINE|L1	-36042	NR_039682	100616268		NR_039682	ENSG00000265247	MIR4472-1	-	microRNA 4472-1	ncRNA	15.36	1.46	10.52054795	3.44E-09
chr8-2733	chr8	143539494	143540494	+	15.4	1000	Intergenic	Intergenic	-5383	NM_001702	575	Hs.194654	NM_001702	ENSG00000181790	ADGRB1	BAI1|GDAIF	adhesion G protein-coupled receptor B1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr8-2734	chr8	143832395	143833395	+	14.7	1000	"intron (NM_205545, intron 1 of 2)"	"intron (NM_205545, intron 1 of 2)"	1057	NM_205545	137797	Hs.441280	NM_205545	ENSG00000197353	LYPD2	LYPDC2|UNQ430	LY6/PLAUR domain containing 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr8-2735	chr8	143852032	143853488	+	21.1	1456	"3' UTR (NM_177476, exon 4 of 4)"	"3' UTR (NM_177476, exon 4 of 4)"	-1514	NM_177458	66004	Hs.158665	NM_023946	ENSG00000180155	LYNX1	SLURP2	Ly6/neurotoxin 1	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr8-2736	chr8	143866298	143869895	+	47.4	3597	promoter-TSS (NM_003695)	promoter-TSS (NM_003695)	-88	NM_003695	8581	Hs.415762	NM_003695	ENSG00000167656	LY6D	E48|Ly-6D	"lymphocyte antigen 6 complex, locus D"	protein-coding	47.37	4.85	9.767010309	4.75E-24
chr8-2740	chr8	143985520	143986520	+	14.7	1000	Intergenic	L1P4c|LINE|L1	13239	NM_000498	1585	Hs.632054	NM_000498	ENSG00000179142	CYP11B2	ALDOS|CPN2|CYP11B|CYP11BL|CYPXIB2|P-450C18|P450C18|P450aldo	cytochrome P450 family 11 subfamily B member 2	protein-coding	14.72	0	15.16333034	3.99E-13
chr8-2741	chr8	144006737	144010872	+	62.7	4135	Intergenic	Intergenic	-9545	NM_000498	1585	Hs.632054	NM_000498	ENSG00000179142	CYP11B2	ALDOS|CPN2|CYP11B|CYP11BL|CYPXIB2|P-450C18|P450C18|P450aldo	cytochrome P450 family 11 subfamily B member 2	protein-coding	62.73	9.71	6.460350154	1.28E-23
chr8-2748	chr8	144483869	144486511	+	35.8	2642	Intergenic	AluJr|SINE|Alu	-14659	NR_126358	104326051	Hs.202140	NR_126358	ENSG00000254338	MAFA-AS1	TCONS_00014882	MAFA antisense RNA 1	ncRNA	35.84	4.85	7.389690722	1.37E-15
chr8-2753	chr8	145778434	145779704	+	16.6	1270	"intron (NM_001308208, intron 4 of 10)"	"intron (NM_001308208, intron 4 of 10)"	-24611	NM_001001795	414919	Hs.105685	NM_001001795	ENSG00000213563	C8orf82	-	chromosome 8 open reading frame 82	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr8-277	chr8	54773048	54774581	+	27.5	1533	"intron (NM_001286674, intron 1 of 2)"	"intron (NM_001286674, intron 1 of 2)"	9446	NM_001286674	8601	Hs.368733	NM_003702	ENSG00000147509	RGS20	RGSZ1|ZGAP1|g(z)GAP|gz-GAP	regulator of G-protein signaling 20	protein-coding	27.52	1.94	14.18556701	2.90E-17
chr8-278	chr8	57159082	57160082	+	19.8	1000	Intergenic	Intergenic	35385	NM_024300	79145	Hs.436913	NM_024300	ENSG00000170791	CHCHD7	COX23	coiled-coil-helix-coiled-coil-helix domain containing 7	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr8-282	chr8	80804343	80805343	+	20.5	1000	Intergenic	Intergenic	-20871	NR_110954	101927040	Hs.350876	NR_110954	ENSG00000249328	LOC101927040	-	uncharacterized LOC101927040	ncRNA	20.48	4.37	4.686498856	6.64E-07
chr8-286	chr8	124948347	124949644	+	23	1297	"intron (NM_001039112, intron 1 of 40)"	"intron (NM_001039112, intron 1 of 40)"	84768	NM_001039112	654463	Hs.632058	NM_001039112	ENSG00000214814	FER1L6	C8ORFK23	fer-1 like family member 6	protein-coding	23.04	3.88	5.93814433	4.22E-09
chr8-288	chr8	126635142	126636142	+	19.8	1000	Intergenic	Intergenic	191191	NM_001282985	10221	Hs.444947	NM_025195	ENSG00000173334	TRIB1	C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1	tribbles pseudokinase 1	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr8-289	chr8	134444441	134445441	+	20.5	1000	Intergenic	AluJo|SINE|Alu	-135394	NM_006096	10397	Hs.372914	NM_006096	ENSG00000104419	NDRG1	CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5	N-myc downstream regulated 1	protein-coding	20.48	3.4	6.023529412	2.41E-08
chr8-29	chr8	47096041	47098202	+	50.6	2161	Intergenic	GSAT|Satellite|centr	-655387	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	50.57	4.85	10.42680412	4.58E-26
chr8-290	chr8	142326312	142327889	+	30.7	1577	Intergenic	L2a|LINE|L2	-23548	NR_024441	731779	Hs.586414	NR_024441	ENSG00000253595	LINC01300	-	long intergenic non-protein coding RNA 1300	ncRNA	30.72	2.91	10.55670103	6.73E-17
chr8-291	chr8	142853161	142858000	+	65.3	4839	Intergenic	MLT1F2|LTR|ERVL-MaLR	12094	NR_031636	100302147		NR_031636	ENSG00000221768	MIR1302-7	MIRN1302-7|hsa-mir-1302-7	microRNA 1302-7	ncRNA	65.29	15.53	4.204121056	8.65E-17
chr8-292	chr8	143587495	143589928	+	42.9	2433	"intron (NM_001702, intron 16 of 29)"	"intron (NM_001702, intron 16 of 29)"	43334	NM_001702	575	Hs.194654	NM_001702	ENSG00000181790	ADGRB1	BAI1|GDAIF	adhesion G protein-coupled receptor B1	protein-coding	42.89	6.31	6.797147385	7.07E-17
chr8-295	chr8	145102543	145104335	+	37.8	1792	Intergenic	CpG	8844	NR_106905	102465509		NR_106905	ENSG00000277888	MIR6846	hsa-mir-6846	microRNA 6846	ncRNA	37.76	3.88	9.731958763	5.72E-19
chr8-296	chr8	145560766	145562025	+	22.4	1259	Intergenic	CpG-26226	-1452	NM_031309	83482	Hs.31746	NM_031309	ENSG00000261678	SCRT1	SCRT|ZNF898	scratch family transcriptional repressor 1	protein-coding	22.4	0.97	23.09278351	1.19E-17
chr8-298	chr8	145902445	145907084	+	81.9	4639	"intron (NM_001308208, intron 1 of 10)"	"intron (NM_001308208, intron 1 of 10)"	6433	NM_001308208	80728	Hs.148988	NM_025251	ENSG00000147799	ARHGAP39	CrGAP|Vilse	Rho GTPase activating protein 39	protein-coding	81.93	12.62	6.49207607	1.95E-30
chr8-30	chr8	94614725	94618504	+	77.4	3779	"intron (NR_033858, intron 5 of 10)"	"intron (NR_033858, intron 5 of 10)"	96047	NR_033858	642924	Hs.434882	NR_033858	ENSG00000246662	LINC00535	-	long intergenic non-protein coding RNA 535	ncRNA	77.45	13.59	5.699043414	1.29E-25
chr8-303	chr8	2198003	2199721	+	32	1718	Intergenic	MER115|DNA|hAT-Tip100	174193	NR_106983	102465695		NR_106983	ENSG00000273593	MIR7160	hsa-mir-7160	microRNA 7160	ncRNA	32	6.31	5.071315372	1.20E-10
chr8-309	chr8	10728232	10729825	+	28.2	1593	Intergenic	Intergenic	31492	NR_125432	101929229	Hs.129800	NR_125432		LOC101929229	-	uncharacterized LOC101929229	ncRNA	28.16	6.8	4.141176471	5.07E-08
chr8-311	chr8	11366293	11367892	+	30.1	1599	"intron (NM_001330465, intron 1 of 11)"	"intron (NM_001330465, intron 1 of 11)"	15571	NM_001715	640	Hs.146591	NM_001715	ENSG00000136573	BLK	MODY11	"BLK proto-oncogene, Src family tyrosine kinase"	protein-coding	30.08	3.88	7.75257732	2.58E-13
chr8-314	chr8	12729500	12730500	+	19.8	1000	Intergenic	AluSx|SINE|Alu	-61090	NR_015383	340357	Hs.434302	NR_015383	ENSG00000254813	LOC340357	-	uncharacterized LOC340357	ncRNA	19.84	4.85	4.090721649	1.08E-05
chr8-315	chr8	17657304	17661519	+	89.6	4215	promoter-TSS (NM_001001925)	promoter-TSS (NM_001001925)	-985	NM_001001924	57509	Hs.7946	NM_020749	ENSG00000129422	MTUS1	ATBP|ATIP|ICIS|MP44|MTSG1	microtubule associated tumor suppressor 1	protein-coding	89.61	10.19	8.793915604	3.87E-41
chr8-325	chr8	25655761	25656761	+	17.9	1000	Intergenic	MIR|SINE|MIR	246379	NM_022659	64641	Hs.491292	NM_022659	ENSG00000221818	EBF2	COE2|EBF-2|O/E-3|OE-3	early B-cell factor 2	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr8-326	chr8	27446395	27447914	+	25	1519	Intergenic	Intergenic	21114	NR_106902	102465508		NR_106902	ENSG00000120885	MIR6843	hsa-mir-6843	microRNA 6843	ncRNA	24.96	5.34	4.674157303	9.72E-08
chr8-328	chr8	27548716	27549976	+	21.8	1260	Intergenic	Intergenic	-9848	NR_037417	100500858		NR_037417	ENSG00000279302	MIR3622A	mir-3622a	microRNA 3622a	ncRNA	21.76	2.91	7.47766323	3.87E-10
chr8-336	chr8	41630199	41631974	+	33.9	1775	"intron (NM_001142446, intron 1 of 42)"	"intron (NM_001142446, intron 1 of 42)"	24054	NM_000037	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding	33.92	3.4	9.976470588	2.03E-17
chr8-345	chr8	59053938	59054938	+	19.2	1000	"intron (NM_147189, intron 4 of 4)"	"intron (NM_147189, intron 4 of 4)"	130222	NR_105005	101929528	Hs.563551	NR_105005	ENSG00000253281	LOC101929528	-	uncharacterized LOC101929528	ncRNA	19.2	0.97	19.79381443	5.65E-15
chr8-359	chr8	101353825	101354825	+	19.8	1000	Intergenic	Tigger8|DNA|TcMar-Tigger	-5879	NM_001280539	25897	Hs.292882	NM_015435	ENSG00000034677	RNF19A	RNF19	"ring finger protein 19A, RBR E3 ubiquitin protein ligase"	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr8-365	chr8	140283986	140285246	+	21.1	1260	Intergenic	LTR16A1|LTR|ERVL	-358367	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr8-369	chr8	143013999	143014999	+	20.5	1000	Intergenic	MLT1B|LTR|ERVL-MaLR	65158	NR_130468	100616374		NR_130468	ENSG00000265612	MIR4539	-	microRNA 4539	ncRNA	20.48	1.94	10.55670103	9.02E-12
chr8-370	chr8	143116083	143117083	+	18.6	1000	Intergenic	MER31B|LTR|ERV1	-36926	NR_130468	100616374		NR_130468	ENSG00000265612	MIR4539	-	microRNA 4539	ncRNA	18.56	0.97	19.13402062	1.12E-13
chr8-377	chr8	550140	551401	+	21.1	1261	Intergenic	Intergenic	-54989	NM_175075	157695	Hs.289293	NM_175075	ENSG00000180190	TDRP	C8orf42|Inm01|TDRP1|TDRP2	testis development related protein	protein-coding	21.12	2.43	8.691358025	2.25E-10
chr8-379	chr8	1222915	1224172	+	19.2	1257	"intron (NM_001346810, intron 3 of 14)"	"intron (NM_001346810, intron 3 of 14)"	27280	NR_111948	286083	Hs.382131	NR_033895	ENSG00000275427	LOC286083	-	uncharacterized LOC286083	ncRNA	19.2	3.4	5.647058824	1.47E-07
chr8-380	chr8	1318062	1319652	+	25	1590	"intron (NM_001346810, intron 3 of 14)"	"intron (NM_001346810, intron 3 of 14)"	-68034	NR_111948	286083	Hs.382131	NR_033895	ENSG00000275427	LOC286083	-	uncharacterized LOC286083	ncRNA	24.96	1.46	17.09589041	3.23E-17
chr8-391	chr8	11323171	11327226	+	55.7	4055	promoter-TSS (NM_053279)	promoter-TSS (NM_053279)	-922	NM_053279	83648	Hs.124299	NM_053279	ENSG00000154319	FAM167A	C8orf13|D8S265	family with sequence similarity 167 member A	protein-coding	55.69	12.62	4.412836767	6.03E-15
chr8-394	chr8	11583537	11584537	+	19.8	1000	"intron (NM_002052, intron 2 of 6)"	"intron (NM_002052, intron 2 of 6)"	18672	NM_001308093	2626	Hs.243987	NM_002052	ENSG00000136574	GATA4	ASD2|TACHD|TOF|VSD1	GATA binding protein 4	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr8-397	chr8	20033833	20034833	+	19.8	1000	"intron (NM_003053, intron 4 of 15)"	"intron (NM_003053, intron 4 of 15)"	6384	NM_001135691	6570	Hs.158322	NM_003053	ENSG00000036565	SLC18A1	CGAT|VAT1|VMAT1	solute carrier family 18 member A1	protein-coding	19.84	2.43	8.164609053	1.91E-09
chr8-398	chr8	21343349	21347347	+	60.8	3998	Intergenic	Intergenic	189598	NR_104677	101929172	Hs.128668	NR_104677	ENSG00000254334	LOC101929172	-	uncharacterized LOC101929172	ncRNA	60.81	12.62	4.818541997	1.30E-17
chr8-410	chr8	24815039	24816949	+	39.7	1910	Intergenic	Intergenic	-1611	NM_006158	4747	Hs.521461	NM_006158	ENSG00000277586	NEFL	CMT1F|CMT2E|NF-L|NF68|NFL|PPP1R110	neurofilament light	protein-coding	39.69	7.77	5.108108108	6.49E-13
chr8-414	chr8	27797072	27798072	+	19.8	1000	"intron (NM_173833, intron 3 of 8)"	"intron (NM_173833, intron 3 of 8)"	52797	NM_173833	286133	Hs.591833	NM_173833	ENSG00000168079	SCARA5	NET33|Tesr	scavenger receptor class A member 5	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr8-417	chr8	41556743	41558225	+	25.6	1482	"intron (NM_000037, intron 22 of 42)"	"intron (NM_000037, intron 22 of 42)"	-34680	NM_001142445	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding	25.6	1.94	13.19587629	4.03E-16
chr8-423	chr8	47135969	47137700	+	29.4	1731	Intergenic	GSAT|Satellite|centr	-615674	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	29.44	1.94	15.17525773	1.31E-19
chr8-424	chr8	47150115	47151425	+	26.2	1310	Intergenic	GSAT|Satellite|centr	-601738	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	26.24	1.46	17.97260274	1.83E-18
chr8-426	chr8	49575118	49576765	+	26.2	1647	"intron (NR_105002, intron 2 of 3)"	L1MC3|LINE|L1	42978	NR_105004	101929217	Hs.547790	NR_105004	ENSG00000253455	LOC101929217	-	uncharacterized LOC101929217	ncRNA	26.24	5.82	4.508591065	7.99E-08
chr8-434	chr8	67013924	67014924	+	19.2	1000	Intergenic	Intergenic	-24854	NM_184085	84675	Hs.85524	NM_033058	ENSG00000147573	TRIM55	MURF-2|RNF29|muRF2	tripartite motif containing 55	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr8-435	chr8	73849689	73850689	+	17.9	1000	"exon (NM_004770, exon 3 of 3)"	"exon (NM_004770, exon 3 of 3)"	-70908	NM_017489	7013	Hs.442707	NM_003218	ENSG00000147601	TERF1	PIN2|TRBF1|TRF|TRF1|hTRF1-AS|t-TRF1	telomeric repeat binding factor 1	protein-coding	17.92	0.97	18.4742268	1.12E-13
chr8-436	chr8	74048858	74050124	+	23	1266	Intergenic	Intergenic	-43984	NM_153225	157869	Hs.439040	NM_153225	ENSG00000164764	SBSPON	C8orf84|RPESP	somatomedin B and thrombospondin type 1 domain containing	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr8-441	chr8	104180719	104182294	+	35.8	1575	"intron (NR_109954, intron 1 of 2)"	HAL1|LINE|L1	2862	NR_109954	100499183	Hs.654812	NR_034092	ENSG00000247081	BAALC-AS1	-	BAALC antisense RNA 1	ncRNA	35.84	4.85	7.389690722	1.37E-15
chr8-446	chr8	134176893	134177893	+	17.9	1000	Intergenic	Intergenic	-25889	NM_080838	8840	Hs.492974	NM_003882	ENSG00000104415	WISP1	CCN4|WISP1c|WISP1i|WISP1tc	WNT1 inducible signaling pathway protein 1	protein-coding	17.92	1.46	12.2739726	2.41E-11
chr8-451	chr8	142050723	142054706	+	57.6	3983	Intergenic	L2b|LINE|L2	-41302	NM_001316342	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding	57.61	7.28	7.913461538	3.02E-25
chr8-459	chr8	146134740	146135740	+	19.2	1000	Intergenic	Intergenic	-8394	NM_021061	58500	Hs.532277	NM_021061	ENSG00000196150	ZNF250	ZFP647|ZNF647	zinc finger protein 250	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr8-46	chr8	1992104	1995476	+	70.4	3372	"intron (NM_003970, intron 1 of 36)"	"intron (NM_003970, intron 1 of 36)"	632	NM_003970	9172	Hs.443683	NM_003970	ENSG00000036448	MYOM2	TTNAP	myomesin 2	protein-coding	70.41	11.65	6.043776824	5.86E-25
chr8-463	chr8	1102844	1104105	+	20.5	1261	"intron (NM_001346810, intron 2 of 14)"	"intron (NM_001346810, intron 2 of 14)"	147349	NR_111948	286083	Hs.382131	NR_033895	ENSG00000275427	LOC286083	-	uncharacterized LOC286083	ncRNA	20.48	4.85	4.222680412	2.52E-06
chr8-464	chr8	1368141	1369411	+	22.4	1270	"intron (NM_001346810, intron 3 of 14)"	"intron (NM_001346810, intron 3 of 14)"	-80756	NM_001277161	9228	Hs.113287	NM_004745	ENSG00000198010	DLGAP2	DAP2|SAPAP2	DLG associated protein 2	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr8-467	chr8	1846619	1849217	+	36.5	2598	"intron (NM_001308153, intron 16 of 29)"	L2a|LINE|L2	-71645	NR_126346	104266957	Hs.734498	NR_126346	ENSG00000253696	KBTBD11-OT1	-	KBTBD11 overlapping transcript 1	ncRNA	36.48	5.82	6.268041237	1.09E-13
chr8-468	chr8	1965569	1967163	+	28.8	1594	Intergenic	L1M1|LINE|L1	-26792	NM_003970	9172	Hs.443683	NM_003970	ENSG00000036448	MYOM2	TTNAP	myomesin 2	protein-coding	28.8	4.85	5.93814433	1.30E-10
chr8-484	chr8	9763753	9764753	+	17.9	1000	Intergenic	CpG	-3271	NR_029668	406907		NR_029668	ENSG00000253230	MIR124-1	MIR124A|MIR124A1|MIRN124-1|MIRN124A1|mir-124-1	microRNA 124-1	ncRNA	17.92	0	18.4597065	9.96E-18
chr8-490	chr8	11062123	11063693	+	22.4	1570	Intergenic	L1MC4a|LINE|L1	-4033	NM_173683	286046	Hs.657083	NM_173683	ENSG00000171044	XKR6	C8orf21|C8orf5|C8orf7|XRG6	XK related 6	protein-coding	22.4	4.85	4.618556701	5.54E-07
chr8-491	chr8	11244684	11245684	+	19.2	1000	"intron (NR_026814, intron 2 of 6)"	"intron (NR_026814, intron 2 of 6)"	19273	NR_026814	83656	Hs.583896	NM_054017	ENSG00000184608	FAM167A-AS1	C8orf12	FAM167A antisense RNA 1	ncRNA	19.2	4.37	4.393592677	3.16E-06
chr8-493	chr8	11444444	11445755	+	22.4	1311	Intergenic	T-rich|Low_complexity|Low_complexity	11055	NR_040035	83655	Hs.742430	NR_040035	ENSG00000170983	LINC00208	C8orf14|NCRNA00208|VIR35	long intergenic non-protein coding RNA 208	ncRNA	22.4	1.94	11.54639175	8.00E-13
chr8-503	chr8	14712346	14713346	+	19.2	1000	"intron (NM_001322881, intron 1 of 6)"	AluSz|SINE|Alu	-1827	NR_029875	494332		NR_029875	ENSG00000199127	MIR383	MIRN383|hsa-mir-383|mir-383	microRNA 383	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr8-505	chr8	19498862	19500204	+	19.2	1342	"intron (NR_024040, intron 1 of 9)"	"intron (NR_024040, intron 1 of 9)"	-39477	NM_001130518	55790	Hs.613729	NM_018371	ENSG00000147408	CSGALNACT1	CSGalNAcT-1|ChGn|beta4GalNAcT	chondroitin sulfate N-acetylgalactosaminyltransferase 1	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr8-508	chr8	20282015	20283648	+	28.2	1633	Intergenic	Intergenic	149547	NR_047509	100874051	Hs.385799	NR_047509	ENSG00000253733	LZTS1-AS1	-	LZTS1 antisense RNA 1	ncRNA	28.16	3.4	8.282352941	1.50E-13
chr8-513	chr8	21587852	21593135	+	79.4	5283	"intron (NM_001495, intron 4 of 8)"	"intron (NM_001495, intron 4 of 8)"	55853	NM_001495	2675	Hs.441202	NM_001495	ENSG00000168546	GFRA2	GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2	GDNF family receptor alpha 2	protein-coding	79.37	16.5	4.81030303	6.93E-23
chr8-514	chr8	21613137	21614137	+	19.2	1000	"intron (NM_001165039, intron 1 of 6)"	"intron (NM_001165039, intron 1 of 6)"	32709	NM_001495	2675	Hs.441202	NM_001495	ENSG00000168546	GFRA2	GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2	GDNF family receptor alpha 2	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr8-517	chr8	22408469	22410492	+	32.6	2023	"5' UTR (NM_005775, exon 1 of 21)"	"5' UTR (NM_005775, exon 1 of 21)"	229	NM_005775	10174	Hs.528572	NM_005775	ENSG00000120896	SORBS3	SCAM-1|SCAM1|SH3D4	sorbin and SH3 domain containing 3	protein-coding	32.64	4.85	6.729896907	5.03E-13
chr8-525	chr8	23073170	23075300	+	46.1	2130	"intron (NM_003844, intron 1 of 9)"	AluSg|SINE|Alu	8445	NM_003844	8797	Hs.213467	NM_003844	ENSG00000104689	TNFRSF10A	APO2|CD261|DR4|TRAILR-1|TRAILR1	TNF receptor superfamily member 10a	protein-coding	46.09	7.28	6.331043956	1.62E-17
chr8-537	chr8	37169821	37171081	+	21.1	1260	"intron (NR_031672, intron 2 of 2).2"	"intron (NR_031672, intron 2 of 2).2"	180980	NR_121620	100507420	Hs.105962	NR_121620		LINC01605	-	long intergenic non-protein coding RNA 1605	ncRNA	21.12	1.94	10.88659794	9.02E-12
chr8-538	chr8	37415990	37416990	+	19.2	1000	Intergenic	Intergenic	-37586	NR_121621	100507420	Hs.105962	NR_121620		LINC01605	-	long intergenic non-protein coding RNA 1605	ncRNA	19.2	3.88	4.948453608	7.67E-07
chr8-540	chr8	37537320	37539110	+	28.2	1790	Intergenic	Intergenic	-15054	NM_025069	80139	Hs.288042	NM_025069	ENSG00000183779	ZNF703	NLZ1|ZEPPO1|ZNF503L|ZPO1	zinc finger protein 703	protein-coding	28.16	4.37	6.443935927	1.84E-11
chr8-554	chr8	66472028	66473283	+	19.8	1255	"intron (NR_033893, intron 1 of 4)"	"intron (NR_033893, intron 1 of 4)"	2246	NR_033893	286186	Hs.449427	NR_033893	ENSG00000254081	LINC01299	-	long intergenic non-protein coding RNA 1299	ncRNA	19.84	4.85	4.090721649	1.08E-05
chr8-555	chr8	74051645	74052645	+	19.2	1000	Intergenic	L2c|LINE|L2	-46638	NM_153225	157869	Hs.439040	NM_153225	ENSG00000164764	SBSPON	C8orf84|RPESP	somatomedin B and thrombospondin type 1 domain containing	protein-coding	19.2	2.43	7.901234568	1.91E-09
chr8-564	chr8	102499327	102500327	+	17.9	1000	Intergenic	Intergenic	-4840	NM_001330593	79977	Hs.661088	NM_024915	ENSG00000083307	GRHL2	BOM|DFNA28|ECTDS|TFCP2L3	grainyhead like transcription factor 2	protein-coding	17.92	0	18.4597065	9.96E-18
chr8-565	chr8	116678522	116680041	+	32.6	1519	"intron (NM_001282903, intron 1 of 6)"	"intron (NM_001282903, intron 1 of 6)"	958	NM_001282902	7227	Hs.657018	NM_014112	ENSG00000104447	TRPS1	GC79|LGCR	transcriptional repressor GATA binding 1	protein-coding	32.64	5.82	5.608247423	2.32E-11
chr8-567	chr8	123791344	123793081	+	34.6	1737	Intergenic	Intergenic	-1689	NM_014943	22882	Hs.377090	NM_014943	ENSG00000178764	ZHX2	AFR1|RAF	zinc fingers and homeoboxes 2	protein-coding	34.56	3.88	8.907216495	5.09E-17
chr8-575	chr8	134372426	134373426	+	19.2	1000	Intergenic	Intergenic	-63379	NM_006096	10397	Hs.372914	NM_006096	ENSG00000104419	NDRG1	CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5	N-myc downstream regulated 1	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr8-576	chr8	134749626	134750886	+	19.2	1260	Intergenic	Intergenic	39339	NR_125422	101927798	Hs.615036	NR_125422	ENSG00000253165	LOC101927798	-	uncharacterized LOC101927798	ncRNA	19.2	4.37	4.393592677	3.16E-06
chr8-579	chr8	139923979	139925239	+	17.9	1260	"intron (NM_152888, intron 1 of 64)"	"intron (NM_152888, intron 1 of 64)"	1640	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr8-582	chr8	142587966	142590844	+	48	2878	Intergenic	Intergenic	-72075	NR_102364	389690	Hs.689547	NM_207414	ENSG00000226807	MROH5	-	maestro heat like repeat family member 5	protein-coding	48.01	8.74	5.493135011	6.98E-16
chr8-585	chr8	143003213	143005254	+	32.6	2041	Intergenic	Intergenic	75424	NR_130468	100616374		NR_130468	ENSG00000265612	MIR4539	-	microRNA 4539	ncRNA	32.64	2.91	11.21649485	6.10E-18
chr8-590	chr8	143633157	143634440	+	21.1	1283	Intergenic	MER4D1|LTR|ERV1	62035	NM_015193	23237	Hs.40888	NM_015193	ENSG00000198576	ARC	Arg3.1	activity regulated cytoskeleton associated protein	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr8-591	chr8	143655345	143660037	+	65.3	4692	Intergenic	Intergenic	38142	NM_015193	23237	Hs.40888	NM_015193	ENSG00000198576	ARC	Arg3.1	activity regulated cytoskeleton associated protein	protein-coding	65.29	15.05	4.33820598	2.48E-17
chr8-596	chr8	524916	528195	+	50.6	3279	Intergenic	MER89|LTR|ERV1	-30774	NM_175075	157695	Hs.289293	NM_175075	ENSG00000180190	TDRP	C8orf42|Inm01|TDRP1|TDRP2	testis development related protein	protein-coding	50.57	10.19	4.962708538	2.94E-15
chr8-603	chr8	1980381	1984556	+	58.2	4175	Intergenic	MIR3|SINE|MIR	-10690	NM_003970	9172	Hs.443683	NM_003970	ENSG00000036448	MYOM2	TTNAP	myomesin 2	protein-coding	58.25	9.22	6.317787419	2.87E-21
chr8-604	chr8	2001248	2002503	+	21.1	1255	"intron (NM_003970, intron 3 of 36)"	"intron (NM_003970, intron 3 of 36)"	8717	NM_003970	9172	Hs.443683	NM_003970	ENSG00000036448	MYOM2	TTNAP	myomesin 2	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr8-610	chr8	5912808	5913808	+	18.6	1000	Intergenic	Intergenic	350761	NR_040040	100287015	Hs.156928	NR_040040	ENSG00000246089	LOC100287015	-	uncharacterized LOC100287015	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr8-611	chr8	8295600	8297583	+	34.6	1983	Intergenic	Intergenic	-57247	NM_001080826	157285	Hs.583863	NM_001080826	ENSG00000275342	PRAG1	NACK|PEAK2|PRAGMIN|SGK223	PEAK1 related kinase activating pseudokinase 1	protein-coding	34.56	8.25	4.189090909	1.34E-09
chr8-616	chr8	9384192	9385443	+	19.8	1251	Intergenic	Intergenic	-28628	NM_003747	8658	Hs.370267	NM_003747	ENSG00000173273	TNKS	ARTD5|PARP-5a|PARP5A|PARPL|TIN1|TINF1|TNKS1|pART5	tankyrase	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr8-618	chr8	10448687	10451331	+	42.9	2644	Intergenic	L4|LINE|RTE	62608	NM_178857	94137	Hs.33538	NM_178857	ENSG00000183638	RP1L1	DCDC4B	RP1 like 1	protein-coding	42.89	5.82	7.369415808	7.27E-18
chr8-62	chr8	1969020	1970484	+	34.6	1464	Intergenic	Intergenic	-23406	NM_003970	9172	Hs.443683	NM_003970	ENSG00000036448	MYOM2	TTNAP	myomesin 2	protein-coding	34.56	7.77	4.447876448	3.74E-10
chr8-620	chr8	10699102	10700102	+	17.3	1000	"intron (NR_125432, intron 2 of 2)"	MER5A1|DNA|hAT-Charlie	2066	NR_125432	101929229	Hs.129800	NR_125432		LOC101929229	-	uncharacterized LOC101929229	ncRNA	17.28	2.91	5.93814433	8.60E-07
chr8-621	chr8	10703726	10705221	+	25	1495	TTS (NR_125432)	TTS (NR_125432)	6937	NR_125432	101929229	Hs.129800	NR_125432		LOC101929229	-	uncharacterized LOC101929229	ncRNA	24.96	3.4	7.341176471	7.55E-11
chr8-632	chr8	11497890	11498890	+	16.6	1000	Intergenic	L1MEc|LINE|L1	-36038	NM_001308094	2626	Hs.243987	NM_002052	ENSG00000136574	GATA4	ASD2|TACHD|TOF|VSD1	GATA binding protein 4	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr8-639	chr8	12830091	12831091	+	16	1000	"intron (NM_020844, intron 1 of 4)"	L1MB3|LINE|L1	27408	NM_020844	57604	Hs.202521	NM_020844	ENSG00000250305	KIAA1456	C8orf79|TRM9L	KIAA1456	protein-coding	16	1.94	8.24742268	7.67E-08
chr8-643	chr8	19821518	19823323	+	32	1805	"intron (NM_000237, intron 9 of 9)"	"intron (NM_000237, intron 9 of 9)"	25838	NM_000237	4023	Hs.180878	NM_000237	ENSG00000175445	LPL	HDLCQ11|LIPD	lipoprotein lipase	protein-coding	32	3.4	9.411764706	2.00E-16
chr8-65	chr8	2232959	2233959	+	25.6	1000	Intergenic	Intergenic	208790	NR_106983	102465695		NR_106983	ENSG00000273593	MIR7160	hsa-mir-7160	microRNA 7160	ncRNA	25.6	5.82	4.39862543	7.99E-08
chr8-651	chr8	21362228	21364961	+	44.2	2733	Intergenic	Intergenic	207844	NR_104677	101929172	Hs.128668	NR_104677	ENSG00000254334	LOC101929172	-	uncharacterized LOC101929172	ncRNA	44.17	8.74	5.053775744	1.04E-13
chr8-653	chr8	21600001	21601001	+	17.9	1000	"intron (NM_001495, intron 4 of 8)"	"intron (NM_001495, intron 4 of 8)"	45845	NM_001495	2675	Hs.441202	NM_001495	ENSG00000168546	GFRA2	GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2	GDNF family receptor alpha 2	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr8-656	chr8	22215169	22216481	+	20.5	1312	Intergenic	AluSz|SINE|Alu	-8937	NM_001135154	23516	Hs.491232	NM_015359	ENSG00000104635	SLC39A14	HMNDYT2|LZT-Hs4|NET34|ZIP14|cig19	solute carrier family 39 member 14	protein-coding	20.48	3.88	5.278350515	1.44E-07
chr8-659	chr8	22531820	22533490	+	25.6	1670	Intergenic	Intergenic	-5994	NM_018688	55909	Hs.433722	NM_018688	ENSG00000147439	BIN3	-	bridging integrator 3	protein-coding	25.6	1.94	13.19587629	4.03E-16
chr8-662	chr8	22640271	22641271	+	17.9	1000	"intron (NM_144962, intron 4 of 6)"	"intron (NM_144962, intron 4 of 6)"	-89956	NM_004430	1960	Hs.534313	NM_004430	ENSG00000179388	EGR3	EGR-3|PILOT	early growth response 3	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr8-664	chr8	23085841	23087240	+	23.7	1399	"intron (NR_033928, intron 2 of 2)"	L1MEf|LINE|L1	3806	NR_033928	389641	Hs.591835	NR_033928	ENSG00000246582	LOC389641	-	uncharacterized LOC389641	ncRNA	23.68	4.85	4.882474227	1.15E-07
chr8-667	chr8	27096717	27100124	+	49.3	3407	"intron (NM_001283055, intron 3 of 5)"	"intron (NM_001283055, intron 3 of 5)"	17536	NM_001283053	81551	Hs.201058	NM_030795	ENSG00000015592	STMN4	RB3	stathmin 4	protein-coding	49.29	10.68	4.615168539	5.88E-14
chr8-676	chr8	27814027	27815280	+	23.7	1253	"intron (NM_173833, intron 3 of 8)"	"intron (NM_173833, intron 3 of 8)"	35716	NM_173833	286133	Hs.591833	NM_173833	ENSG00000168079	SCARA5	NET33|Tesr	scavenger receptor class A member 5	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr8-677	chr8	28278560	28279560	+	17.3	1000	Intergenic	AluJr|SINE|Alu	-35083	NM_018660	55893	Hs.435535	NM_018660	ENSG00000186918	ZNF395	HDBP-2|HDBP2|HDRF-2|PBF|PRF-1|PRF1|Si-1-8-14	zinc finger protein 395	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr8-678	chr8	28305074	28306074	+	16	1000	"intron (NM_172366, intron 6 of 8)"	"intron (NM_172366, intron 6 of 8)"	42261	NM_001258211	157574	Hs.741522	NM_172366	ENSG00000214050	FBXO16	FBX16	F-box protein 16	protein-coding	16	3.88	4.12371134	7.91E-05
chr8-680	chr8	28362752	28363752	+	18.6	1000	promoter-TSS (NR_036250)	promoter-TSS (NR_036250)	-553	NR_036250	100422903		NR_036250	ENSG00000265251	MIR4288	-	microRNA 4288	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr8-681	chr8	30249223	30250516	+	21.8	1293	"intron (NM_001008710, intron 1 of 8)"	"intron (NM_001008710, intron 1 of 8)"	-6952	NR_046205	100128750	Hs.126813	NR_046205	ENSG00000254109	RBPMS-AS1	-	RBPMS antisense RNA 1	ncRNA	21.76	1.94	11.21649485	8.00E-13
chr8-683	chr8	32076320	32077320	+	18.6	1000	"intron (NM_013962, intron 1 of 4)"	"intron (NM_013962, intron 1 of 4)"	193086	NR_104157	100856811	Hs.97362	NR_104156		NRG1-IT1	-	NRG1 intronic transcript 1	ncRNA	18.56	4.37	4.247139588	1.41E-05
chr8-684	chr8	37550854	37558711	+	125.5	7857	"exon (NM_025069, exon 2 of 2)"	"exon (NM_025069, exon 2 of 2)"	1513	NM_025069	80139	Hs.288042	NM_025069	ENSG00000183779	ZNF703	NLZ1|ZEPPO1|ZNF503L|ZPO1	zinc finger protein 703	protein-coding	125.46	16.99	7.384343732	2.33E-50
chr8-685	chr8	38507949	38508949	+	18.6	1000	Intergenic	CpG	-49674	NR_003129	286140	Hs.512071	NR_003129		RNF5P1	-	ring finger protein 5 pseudogene 1	pseudo	18.56	2.91	6.378006873	1.38E-07
chr8-686	chr8	38563415	38564415	+	17.9	1000	Intergenic	THE1D|LTR|ERVL-MaLR	-21789	NM_001330521	6867	Hs.279245	NM_006283	ENSG00000147526	TACC1	Ga55	transforming acidic coiled-coil containing protein 1	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr8-687	chr8	41063495	41064495	+	18.6	1000	Intergenic	MLT1B|LTR|ERVL-MaLR	64667	NR_049801	100847068		NR_049801	ENSG00000263372	MIR548AO	-	microRNA 548ao	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr8-688	chr8	41710464	41713996	+	52.5	3532	"intron (NM_001142446, intron 1 of 42)"	AluJr|SINE|Alu	42050	NM_001142446	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding	52.49	6.8	7.719117647	8.94E-23
chr8-690	chr8	41727224	41728488	+	21.8	1264	"intron (NM_001142446, intron 1 of 42)"	"intron (NM_001142446, intron 1 of 42)"	26424	NM_001142446	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding	21.76	0.97	22.43298969	1.19E-17
chr8-692	chr8	41995940	41997788	+	28.2	1848	Intergenic	Intergenic	-13600	NM_001134296	10947	Hs.654529	NM_006803	ENSG00000070718	AP3M2	AP47B|CLA20|P47B	adaptor related protein complex 3 mu 2 subunit	protein-coding	28.16	3.4	8.282352941	1.50E-13
chr8-698	chr8	47324808	47325808	+	17.9	1000	Intergenic	GSAT|Satellite|centr	-427200	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	17.92	1.46	12.2739726	2.41E-11
chr8-700	chr8	55104352	55105352	+	18.6	1000	Intergenic	L1MB4|LINE|L1	57071	NM_014175	29088	Hs.18349	NM_014175	ENSG00000137547	MRPL15	HSPC145|L15mt|MRP-L15|MRP-L7|RPML7	mitochondrial ribosomal protein L15	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr8-701	chr8	59456390	59457390	+	17.3	1000	Intergenic	Intergenic	-8593	NM_001330537	6386	Hs.200804	NM_005625	ENSG00000137575	SDCBP	MDA-9|MDA9|ST1|SYCL|TACIP18	syndecan binding protein	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr8-709	chr8	81782995	81786112	+	49.3	3117	"intron (NM_001033723, intron 1 of 8)"	"intron (NM_001033723, intron 1 of 8)"	2463	NM_001033723	619279	Hs.434957	NM_032651	ENSG00000164684	ZNF704	Gig1	zinc finger protein 704	protein-coding	49.29	9.22	5.345986985	6.74E-16
chr8-711	chr8	82472639	82473639	+	18.6	1000	Intergenic	Intergenic	-29514	NM_001105281	646486	Hs.586370	NM_001105281	ENSG00000197416	FABP12	-	fatty acid binding protein 12	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr8-720	chr8	121746765	121747765	+	17.9	1000	"intron (NM_021021, intron 1 of 6)"	"intron (NM_021021, intron 1 of 6)"	-26228	NR_125419	101927543	Hs.371902	NR_125419	ENSG00000248318	LOC101927543	-	uncharacterized LOC101927543	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr8-721	chr8	123590807	123592181	+	22.4	1374	Intergenic	MLT1J1|LTR|ERVL-MaLR	-10611	NR_131202	105375734	Hs.628341	NR_131202		LOC105375734	-	uncharacterized LOC105375734	ncRNA	22.4	1.94	11.54639175	8.00E-13
chr8-722	chr8	123766145	123767410	+	19.2	1265	Intergenic	Intergenic	-27124	NM_014943	22882	Hs.377090	NM_014943	ENSG00000178764	ZHX2	AFR1|RAF	zinc fingers and homeoboxes 2	protein-coding	19.2	3.4	5.647058824	1.47E-07
chr8-726	chr8	125766550	125767550	+	15.4	1000	Intergenic	MLT1K|LTR|ERVL-MaLR	-26302	NM_001282974	9788	Hs.336994	NM_014751	ENSG00000170873	MTSS1	MIM|MIMA|MIMB	"MTSS1, I-BAR domain containing"	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr8-727	chr8	126442535	126446236	+	62.1	3701	promoter-TSS (NM_001282985)	promoter-TSS (NM_001282985)	-66	NM_001282985	10221	Hs.444947	NM_025195	ENSG00000173334	TRIB1	C8FW|GIG-2|GIG2|SKIP1|TRB-1|TRB1	tribbles pseudokinase 1	protein-coding	62.09	7.77	7.990990991	8.12E-27
chr8-729	chr8	126987817	126988817	+	18.6	1000	Intergenic	Intergenic	-24876	NR_038446	100130231	Hs.729642	NR_038446	ENSG00000245164	LINC00861	-	long intergenic non-protein coding RNA 861	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr8-730	chr8	127957583	127958583	+	18.6	1000	Intergenic	Intergenic	-67316	NR_045262	100750225	Hs.571530	NR_045262	ENSG00000253438	PCAT1	PCA1|PCAT-1	prostate cancer associated transcript 1 (non-protein coding)	ncRNA	18.56	2.43	7.637860082	1.53E-08
chr8-731	chr8	128597797	128599088	+	23.7	1291	Intergenic	Plat_L3|LINE|CR1	-104058	NR_024393	727677	Hs.673248	NR_024393	ENSG00000246228	CASC8	CARLo-1|LINC00860	cancer susceptibility candidate 8 (non-protein coding)	ncRNA	23.68	4.37	5.418764302	2.46E-08
chr8-733	chr8	134152103	134153103	+	16	1000	Intergenic	Intergenic	-37293	NM_001045556	6503	Hs.75367	NM_006748	ENSG00000155926	SLA	SLA1|SLAP	Src like adaptor	protein-coding	16	1.94	8.24742268	7.67E-08
chr8-734	chr8	140278699	140279699	+	18.6	1000	Intergenic	Intergenic	-352950	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding	18.56	0.49	37.87755102	9.96E-18
chr8-736	chr8	141784841	141786481	+	29.4	1640	"intron (NM_001316342, intron 12 of 32)"	FLAM_C|SINE|Alu	-140015	NM_001164623	27161	Hs.743313	NM_012154	ENSG00000123908	AGO2	EIF2C2|Q10	"argonaute 2, RISC catalytic component"	protein-coding	29.44	7.28	4.043956044	3.95E-08
chr8-740	chr8	142541721	142543083	+	21.8	1362	Intergenic	MLT2A2|LTR|ERVL	-25072	NR_102364	389690	Hs.689547	NM_207414	ENSG00000226807	MROH5	-	maestro heat like repeat family member 5	protein-coding	21.76	1.94	11.21649485	8.00E-13
chr8-743	chr8	143226074	143227074	+	17.9	1000	Intergenic	L3|LINE|CR1	-31126	NR_039682	100616268		NR_039682	ENSG00000265247	MIR4472-1	-	microRNA 4472-1	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr8-75	chr8	47183958	47185209	+	26.9	1251	Intergenic	GSAT|Satellite|centr	-567925	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	26.88	4.37	6.151029748	1.19E-10
chr8-756	chr8	762655	763655	+	17.9	1000	"intron (NM_001346810, intron 1 of 14)"	"intron (NM_001346810, intron 1 of 14)"	74607	NR_134292	401442	Hs.678992	NR_134292	ENSG00000282375	LOC401442	-	uncharacterized LOC401442	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr8-759	chr8	1010793	1016560	+	85.1	5767	"intron (NM_001346810, intron 2 of 14)"	"intron (NM_001346810, intron 2 of 14)"	237147	NR_111948	286083	Hs.382131	NR_033895	ENSG00000275427	LOC286083	-	uncharacterized LOC286083	ncRNA	85.13	15.53	5.481648422	4.20E-27
chr8-763	chr8	1413164	1414164	+	16.6	1000	"intron (NM_001346810, intron 3 of 14)"	MER21A|LTR|ERVL	-35868	NM_001277161	9228	Hs.113287	NM_004745	ENSG00000198010	DLGAP2	DAP2|SAPAP2	DLG associated protein 2	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr8-764	chr8	1487461	1488749	+	20.5	1288	"intron (NM_004745, intron 1 of 11)"	"intron (NM_004745, intron 1 of 11)"	38573	NM_004745	9228	Hs.113287	NM_004745	ENSG00000198010	DLGAP2	DAP2|SAPAP2	DLG associated protein 2	protein-coding	20.48	1.94	10.55670103	9.02E-12
chr8-765	chr8	1574689	1578468	+	44.2	3779	"intron (NM_004745, intron 4 of 11)"	"intron (NM_004745, intron 4 of 11)"	-6748	NR_103863	100507435	Hs.667133	NR_103863	ENSG00000253267	DLGAP2-AS1	-	DLGAP2 antisense RNA 1	ncRNA	44.17	6.8	6.495588235	8.79E-17
chr8-767	chr8	1652161	1653759	+	25.6	1598	"3' UTR (NM_001277161, exon 11 of 11)"	"3' UTR (NM_001277161, exon 11 of 11)"	58540	NR_134302	101927752	Hs.356690	NR_134302	ENSG00000253982	LOC101927752	-	uncharacterized LOC101927752	ncRNA	25.6	6.31	4.057052298	2.77E-07
chr8-769	chr8	1831321	1832321	+	16.6	1000	"intron (NM_001308153, intron 11 of 29)"	"intron (NM_001308153, intron 11 of 29)"	59679	NM_014629	9639	Hs.98594	NM_014629	ENSG00000104728	ARHGEF10	GEF10|SNCV	Rho guanine nucleotide exchange factor 10	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr8-770	chr8	1851830	1853108	+	21.1	1278	"intron (NM_001308153, intron 17 of 29)"	"intron (NM_001308153, intron 17 of 29)"	-67094	NR_126346	104266957	Hs.734498	NR_126346	ENSG00000253696	KBTBD11-OT1	-	KBTBD11 overlapping transcript 1	ncRNA	21.12	3.4	6.211764706	2.41E-08
chr8-771	chr8	1854707	1855707	+	16	1000	"intron (NM_001308153, intron 18 of 29)"	"intron (NM_001308153, intron 18 of 29)"	-64356	NR_126346	104266957	Hs.734498	NR_126346	ENSG00000253696	KBTBD11-OT1	-	KBTBD11 overlapping transcript 1	ncRNA	16	1.94	8.24742268	7.67E-08
chr8-784	chr8	4757993	4758993	+	16.6	1000	"intron (NM_033225, intron 1 of 69)"	L2b|LINE|L2	93835	NM_033225	64478	Hs.571466	NM_033225	ENSG00000183117	CSMD1	PPP1R24	CUB and Sushi multiple domains 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr8-787	chr8	8426193	8427193	+	17.3	1000	Intergenic	Intergenic	-132973	NM_194284	137075	Hs.183617	NM_194284	ENSG00000253958	CLDN23	CLDNL|hCG1646163	claudin 23	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr8-788	chr8	8431131	8432390	+	21.1	1259	Intergenic	Intergenic	-127906	NM_194284	137075	Hs.183617	NM_194284	ENSG00000253958	CLDN23	CLDNL|hCG1646163	claudin 23	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr8-789	chr8	8521830	8522830	+	17.3	1000	Intergenic	Intergenic	-37336	NM_194284	137075	Hs.183617	NM_194284	ENSG00000253958	CLDN23	CLDNL|hCG1646163	claudin 23	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr8-790	chr8	9029852	9030852	+	17.9	1000	Intergenic	Intergenic	-16157	NR_125431	101929128		NR_125431	ENSG00000248538	LOC101929128	-	uncharacterized LOC101929128	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr8-791	chr8	9162047	9163392	+	23	1345	Intergenic	AluSz|SINE|Alu	-19842	NR_040039	157273	Hs.650222	NR_040039	ENSG00000254235	LOC157273	-	uncharacterized LOC157273	ncRNA	23.04	4.85	4.750515464	1.15E-07
chr8-792	chr8	9167910	9169383	+	25.6	1473	Intergenic	Intergenic	-13915	NR_040039	157273	Hs.650222	NR_040039	ENSG00000254235	LOC157273	-	uncharacterized LOC157273	ncRNA	25.6	2.91	8.797250859	6.53E-13
chr8-793	chr8	9191570	9193110	+	26.9	1540	"non-coding (NR_040039, exon 3 of 3)"	"non-coding (NR_040039, exon 3 of 3)"	9779	NR_040039	157273	Hs.650222	NR_040039	ENSG00000254235	LOC157273	-	uncharacterized LOC157273	ncRNA	26.88	5.34	5.033707865	3.94E-09
chr8-797	chr8	10434889	10435889	+	17.9	1000	Intergenic	Intergenic	52333	NM_001197020	203074	Hs.591394	NM_198464	ENSG00000184647	PRSS55	CT153|T-SP1|TSP1|UNQ9391	"protease, serine 55"	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr8-798	chr8	10586518	10587518	+	17.3	1000	"intron (NM_031439, intron 1 of 1)"	"intron (NM_031439, intron 1 of 1)"	1066	NM_031439	83595	Hs.709543	NM_031439	ENSG00000171056	SOX7	-	SRY-box 7	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr8-799	chr8	10739477	10740477	+	16.6	1000	Intergenic	Intergenic	42441	NR_125432	101929229	Hs.129800	NR_125432		LOC101929229	-	uncharacterized LOC101929229	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr8-801	chr8	10758243	10759508	+	22.4	1265	"intron (NM_173683, intron 2 of 2)"	AluJb|SINE|Alu	61339	NR_125432	101929229	Hs.129800	NR_125432		LOC101929229	-	uncharacterized LOC101929229	ncRNA	22.4	3.4	6.588235294	3.73E-09
chr8-802	chr8	10802921	10805792	+	41	2871	"intron (NM_173683, intron 1 of 2)"	L2b|LINE|L2	88456	NR_030328	693183		NR_030328	ENSG00000207600	MIR598	MIRN598|hsa-mir-598|mir-598	microRNA 598	ncRNA	40.97	9.22	4.443600868	9.99E-12
chr8-806	chr8	11293481	11296507	+	45.4	3026	"intron (NR_026814, intron 5 of 6)"	MIRb|SINE|MIR	29282	NM_053279	83648	Hs.124299	NM_053279	ENSG00000154319	FAM167A	C8orf13|D8S265	family with sequence similarity 167 member A	protein-coding	45.45	10.19	4.460255152	1.49E-12
chr8-819	chr8	11620138	11621138	+	17.9	1000	TTS (NR_103552)	TTS (NR_103552)	1873	NR_103552	606553	Hs.545529	NM_001031839	ENSG00000255394	C8orf49	G4DM	chromosome 8 open reading frame 49	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr8-82	chr8	144851715	144853848	+	49.9	2133	Intergenic	CpG	-10103	NR_136279	105375800	Hs.632037	NR_136279	ENSG00000254973	LOC105375800	-	chromosome 12 open reading frame 49 pseudogene	pseudo	49.93	6.8	7.342647059	5.24E-21
chr8-822	chr8	19612868	19616460	+	55.7	3592	Intergenic	CpG	-60254	NM_018142	55174	Hs.512627	NM_018142	ENSG00000104613	INTS10	C8orf35|INT10	integrator complex subunit 10	protein-coding	55.69	7.28	7.649725275	1.86E-23
chr8-825	chr8	19937883	19938883	+	17.3	1000	Intergenic	L1MC4a|LINE|L1	102334	NM_001135691	6570	Hs.158322	NM_003053	ENSG00000036565	SLC18A1	CGAT|VAT1|VMAT1	solute carrier family 18 member A1	protein-coding	17.28	1.46	11.83561644	2.99E-10
chr8-830	chr8	20394332	20395332	+	17.3	1000	Intergenic	MLT1J2|LTR|ERVL-MaLR	261548	NR_047509	100874051	Hs.385799	NR_047509	ENSG00000253733	LZTS1-AS1	-	LZTS1 antisense RNA 1	ncRNA	17.28	3.4	5.082352941	4.51E-06
chr8-831	chr8	20415747	20419115	+	50.6	3368	Intergenic	Intergenic	284147	NR_047509	100874051	Hs.385799	NR_047509	ENSG00000253733	LZTS1-AS1	-	LZTS1 antisense RNA 1	ncRNA	50.57	4.37	11.57208238	1.09E-27
chr8-833	chr8	21243987	21244987	+	16.6	1000	Intergenic	L2|LINE|L2	88737	NR_104677	101929172	Hs.128668	NR_104677	ENSG00000254334	LOC101929172	-	uncharacterized LOC101929172	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr8-836	chr8	21493573	21494573	+	16.6	1000	Intergenic	Tigger13a|DNA|TcMar-Tigger	152273	NM_001495	2675	Hs.441202	NM_001495	ENSG00000168546	GFRA2	GDNFRB|NRTNR-ALPHA|NTNRA|RETL2|TRNR2	GDNF family receptor alpha 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr8-842	chr8	21741588	21742588	+	17.9	1000	Intergenic	AluSz|SINE|Alu	29131	NM_003974	9046	Hs.71215	NM_003974	ENSG00000147443	DOK2	p56DOK|p56dok-2	docking protein 2	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr8-843	chr8	22011409	22017219	+	122.3	5810	promoter-TSS (NM_139278)	promoter-TSS (NM_139278)	30	NM_139278	203190	Hs.33470	NM_139278	ENSG00000168481	LGI3	LGIL4	leucine rich repeat LGI family member 3	protein-coding	122.26	17.96	6.807349666	8.49E-46
chr8-845	chr8	22758095	22759095	+	17.9	1000	"intron (NM_144962, intron 3 of 6)"	Tigger15a|DNA|TcMar-Tigger	23110	NR_125433	101929237	Hs.677838	NR_125433	ENSG00000248738	LOC101929237	-	uncharacterized LOC101929237	ncRNA	17.92	4.37	4.100686499	1.41E-05
chr8-846	chr8	22761211	22762473	+	19.2	1262	"intron (NM_144962, intron 3 of 6)"	"intron (NM_144962, intron 3 of 6)"	23579	NM_144962	157310	Hs.491242	NM_144962	ENSG00000134020	PEBP4	CORK-1|CORK1|GWTM1933|HEL-S-300|PEBP-4|PRO4408|hPEBP4	phosphatidylethanolamine binding protein 4	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr8-848	chr8	22971105	22973400	+	35.8	2295	"exon (NM_003841, exon 3 of 5)"	"exon (NM_003841, exon 3 of 5)"	11925	NM_003841	8794	Hs.655801	NM_003841	ENSG00000173535	TNFRSF10C	CD263|DCR1|DCR1-TNFR|LIT|TRAIL-R3|TRAILR3|TRID	TNF receptor superfamily member 10c	protein-coding	35.84	5.82	6.158075601	1.09E-13
chr8-849	chr8	22996359	22997359	+	17.9	1000	"intron (NM_003840, intron 7 of 8)"	"intron (NM_003840, intron 7 of 8)"	24684	NM_003840	8793	Hs.213467	NM_003840	ENSG00000173530	TNFRSF10D	CD264|DCR2|TRAIL-R4|TRAILR4|TRUNDD	TNF receptor superfamily member 10d	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr8-853	chr8	23688155	23689155	+	17.3	1000	Intergenic	MIRb|SINE|MIR	23665	NM_003155	6781	Hs.25590	NM_003155	ENSG00000159167	STC1	STC	stanniocalcin 1	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr8-854	chr8	23837350	23838350	+	16	1000	Intergenic	Intergenic	-125530	NM_003155	6781	Hs.25590	NM_003155	ENSG00000159167	STC1	STC	stanniocalcin 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr8-856	chr8	25525475	25527786	+	32.6	2311	Intergenic	MIRc|SINE|MIR	210183	NM_001317906	157313	Hs.33366	NM_152562	ENSG00000184661	CDCA2	PPP1R81|Repo-Man	cell division cycle associated 2	protein-coding	32.64	3.4	9.6	2.00E-16
chr8-857	chr8	25709313	25710665	+	19.8	1352	"intron (NM_022659, intron 14 of 15)"	"intron (NM_022659, intron 14 of 15)"	192651	NM_022659	64641	Hs.491292	NM_022659	ENSG00000221818	EBF2	COE2|EBF-2|O/E-3|OE-3	early B-cell factor 2	protein-coding	19.84	3.88	5.113402062	7.67E-07
chr8-859	chr8	25792906	25793906	+	16.6	1000	"intron (NM_022659, intron 6 of 15)"	"intron (NM_022659, intron 6 of 15)"	109234	NM_022659	64641	Hs.491292	NM_022659	ENSG00000221818	EBF2	COE2|EBF-2|O/E-3|OE-3	early B-cell factor 2	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr8-860	chr8	26896866	26898417	+	22.4	1551	Intergenic	Intergenic	-172881	NM_000680	148	Hs.52931	NM_000680	ENSG00000120907	ADRA1A	ADRA1C|ADRA1L1|ALPHA1AAR	adrenoceptor alpha 1A	protein-coding	22.4	3.88	5.773195876	2.53E-08
chr8-862	chr8	27106428	27107428	+	17.3	1000	"intron (NM_030795, intron 1 of 6)"	MER20|DNA|hAT-Charlie	9028	NM_001283053	81551	Hs.201058	NM_030795	ENSG00000015592	STMN4	RB3	stathmin 4	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr8-868	chr8	27758827	27760356	+	26.9	1529	"intron (NM_173833, intron 7 of 8)"	"intron (NM_173833, intron 7 of 8)"	-15958	NR_036249	100422828		NR_036249	ENSG00000265847	MIR4287	-	microRNA 4287	ncRNA	26.88	2.91	9.237113402	7.03E-14
chr8-871	chr8	27909264	27910264	+	16.6	1000	"intron (NM_001010906, intron 10 of 18)"	Kanga1|DNA|TcMar-Tc2	31624	NM_001010906	389643	Hs.370129	NM_001010906	ENSG00000189233	NUGGC	C8orf80|HMFN0672|SLIP-GC	"nuclear GTPase, germinal center associated"	protein-coding	16.64	0	17.14115603	3.68E-16
chr8-872	chr8	28077094	28078094	+	16.6	1000	Intergenic	Intergenic	-97055	NM_006228	5368	Hs.88218	NM_006228	ENSG00000168081	PNOC	N/OFQ|NOP|OFQ|PPNOC|ppN/OFQ	prepronociceptin	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr8-874	chr8	29454682	29455937	+	18.6	1255	Intergenic	Intergenic	150316	NR_026765	619351	Hs.566911	NR_026765	ENSG00000251191	LINC00589	C8orf75	long intergenic non-protein coding RNA 589	ncRNA	18.56	3.88	4.783505155	3.85E-06
chr8-878	chr8	37430218	37431218	+	17.9	1000	Intergenic	Intergenic	-51814	NR_121621	100507420	Hs.105962	NR_121620		LINC01605	-	long intergenic non-protein coding RNA 1605	ncRNA	17.92	3.88	4.618556701	3.85E-06
chr8-881	chr8	38468693	38469693	+	17.9	1000	Intergenic	Intergenic	-10418	NR_003129	286140	Hs.512071	NR_003129		RNF5P1	-	ring finger protein 5 pseudogene 1	pseudo	17.92	3.88	4.618556701	3.85E-06
chr8-882	chr8	38503616	38504616	+	17.3	1000	Intergenic	Intergenic	-45341	NR_003129	286140	Hs.512071	NR_003129		RNF5P1	-	ring finger protein 5 pseudogene 1	pseudo	17.28	0.97	17.81443299	2.06E-12
chr8-883	chr8	41266169	41267169	+	16.6	1000	Intergenic	Intergenic	-81412	NM_016099	51125	Hs.654773	NM_016099	ENSG00000147533	GOLGA7	GCP16|GOLGA3AP1|GOLGA7A|HSPC041	golgin A7	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr8-888	chr8	41569233	41571047	+	28.8	1814	"intron (NM_000037, intron 16 of 42)"	"intron (NM_000037, intron 16 of 42)"	-47336	NM_001142445	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding	28.8	0.97	29.69072165	9.47E-25
chr8-894	chr8	47103251	47104533	+	23	1282	Intergenic	GSAT|Satellite|centr	-648616	NR_027012	497634	Hs.406982	NR_027012	ENSG00000253314	LINC00293	BEYLA|NCRNA00293	long intergenic non-protein coding RNA 293	ncRNA	23.04	4.85	4.750515464	1.15E-07
chr8-898	chr8	53851712	53857006	+	85.8	5294	TTS (NM_005285)	TTS (NM_005285)	1891	NM_005285	2831	Hs.248117	NM_005285	ENSG00000183729	NPBWR1	GPR7	neuropeptides B and W receptor 1	protein-coding	85.77	11.65	7.36223176	6.36E-35
chr8-899	chr8	54572918	54574728	+	31.4	1810	Intergenic	Intergenic	181779	NM_213620	51606	Hs.491737	NM_015941	ENSG00000047249	ATP6V1H	CGI-11|MSTP042|NBP1|SFD|SFDalpha|SFDbeta|VMA13	ATPase H+ transporting V1 subunit H	protein-coding	31.36	6.31	4.969889065	6.13E-10
chr8-909	chr8	72718411	72719682	+	19.8	1271	Intergenic	Intergenic	-36312	NR_033652	100132891	Hs.137674	NR_033651	ENSG00000235531	MSC-AS1	-	MSC antisense RNA 1	ncRNA	19.84	1.94	10.22680412	9.57E-11
chr8-91	chr8	41654919	41657217	+	44.2	2298	promoter-TSS (NM_020476)	promoter-TSS (NM_020476)	-928	NM_020476	286	Hs.654438	NM_000037	ENSG00000029534	ANK1	ANK|SPH1|SPH2	ankyrin 1	protein-coding	44.17	3.4	12.99117647	6.68E-26
chr8-913	chr8	86191498	86192765	+	21.1	1267	"intron (NM_198584, intron 6 of 6)"	"intron (NM_198584, intron 6 of 6)"	34415	NM_198584	377677	Hs.127189	NM_198584	ENSG00000185015	CA13	CAXIII	carbonic anhydrase 13	protein-coding	21.12	1.94	10.88659794	9.02E-12
chr8-914	chr8	87082984	87083984	+	17.9	1000	Intergenic	AluSx|SINE|Alu	-1558	NM_033126	85481	Hs.566854	NM_033126	ENSG00000147613	PSKH2	-	protein serine kinase H2	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr8-929	chr8	123657870	123658870	+	16	1000	Intergenic	Intergenic	47975	NR_126348	104266958	Hs.575540	NR_126348	ENSG00000253819	LINC01151	-	long intergenic non-protein coding RNA 1151	ncRNA	16	3.88	4.12371134	7.91E-05
chr8-93	chr8	101225700	101227079	+	28.8	1379	"intron (NM_172218, intron 12 of 18)"	L2|LINE|L2	55826	NM_003114	6674	Hs.591866	NM_003114	ENSG00000104450	SPAG1	CILD28|CT140|HEL-S-268|HSD-3.8|SP75|TPIS	sperm associated antigen 1	protein-coding	28.8	6.31	4.564183835	1.42E-08
chr8-930	chr8	123684406	123685406	+	17.9	1000	"intron (NR_126348, intron 2 of 3)"	"intron (NR_126348, intron 2 of 3)"	21439	NR_126348	104266958	Hs.575540	NR_126348	ENSG00000253819	LINC01151	-	long intergenic non-protein coding RNA 1151	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr8-932	chr8	124513731	124514731	+	17.3	1000	"3' UTR (NM_058229, exon 9 of 9)"	"3' UTR (NM_058229, exon 9 of 9)"	30152	NM_148177	114907	Hs.403933	NM_058229	ENSG00000156804	FBXO32	Fbx32|MAFbx	F-box protein 32	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr8-933	chr8	124522772	124523772	+	16.6	1000	"intron (NM_001242463, intron 4 of 6)"	"intron (NM_001242463, intron 4 of 6)"	21111	NM_148177	114907	Hs.403933	NM_058229	ENSG00000156804	FBXO32	Fbx32|MAFbx	F-box protein 32	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr8-936	chr8	125636277	125637277	+	17.9	1000	"intron (NM_014751, intron 3 of 13)"	"intron (NM_014751, intron 3 of 13)"	85434	NM_001278645	4715	Hs.15977	NM_005005	ENSG00000147684	NDUFB9	B22|CI-B22|LYRM3|UQOR22	NADH:ubiquinone oxidoreductase subunit B9	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr8-937	chr8	125681687	125682951	+	19.8	1264	"intron (NM_014751, intron 3 of 13)"	L2a|LINE|L2	58429	NM_001282971	9788	Hs.336994	NM_014751	ENSG00000170873	MTSS1	MIM|MIMA|MIMB	"MTSS1, I-BAR domain containing"	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr8-941	chr8	130759127	130760127	+	16.6	1000	TTS (NM_031415)	TTS (NM_031415)	39507	NM_031415	56169	Hs.133244	NM_031415	ENSG00000147697	GSDMC	MLZE	gasdermin C	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr8-947	chr8	136054139	136055139	+	17.9	1000	Intergenic	LTR16A|LTR|ERVL	-191735	NR_120396	286094	Hs.440978	NR_026706	ENSG00000254083	LINC01591	-	long intergenic non-protein coding RNA 1591	ncRNA	17.92	1.94	9.237113402	9.53E-10
chr8-949	chr8	140022525	140023525	+	17.3	1000	Intergenic	Intergenic	-96776	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr8-950	chr8	140039735	140040735	+	17.9	1000	Intergenic	Intergenic	-113986	NM_152888	169044	Hs.117169	NM_152888	ENSG00000169436	COL22A1	-	collagen type XXII alpha 1 chain	protein-coding	17.92	0.49	36.57142857	9.96E-18
chr8-952	chr8	140392677	140393955	+	19.8	1278	Intergenic	Intergenic	321983	NR_104210	51305	Hs.493037	NM_001282534	ENSG00000169427	KCNK9	K2p9.1|KT3.2|TASK-3|TASK3	potassium two pore domain channel subfamily K member 9	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr8-955	chr8	141959510	141960510	+	16	1000	"intron (NM_153831, intron 1 of 31)"	MER52A|LTR|ERV1	51402	NM_005607	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding	16	0.97	16.49484536	3.54E-11
chr8-957	chr8	142028729	142030009	+	20.5	1280	Intergenic	Intergenic	-17957	NM_001316342	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding	20.48	0.49	41.79591837	5.97E-21
chr8-958	chr8	142034767	142035767	+	16	1000	Intergenic	Intergenic	-23855	NM_001316342	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding	16	3.88	4.12371134	7.91E-05
chr8-959	chr8	142044880	142045880	+	17.3	1000	Intergenic	MLT1C|LTR|ERVL-MaLR	-33968	NM_001316342	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr8-960	chr8	142058006	142059006	+	17.9	1000	Intergenic	AluSg7|SINE|Alu	-47094	NM_001316342	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr8-961	chr8	142061597	142062597	+	17.3	1000	Intergenic	L1MEg|LINE|L1	-50685	NM_001316342	5747	Hs.395482	NM_005607	ENSG00000169398	PTK2	FADK|FAK|FAK1|FRNK|PPP1R71|p125FAK|pp125FAK	protein tyrosine kinase 2	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr8-963	chr8	142403738	142407141	+	42.2	3403	Intergenic	Intergenic	-26049	NM_007079	11156	Hs.43666	NM_007079	ENSG00000184489	PTP4A3	PRL-3|PRL-R|PRL3	"protein tyrosine phosphatase type IVA, member 3"	protein-coding	42.25	6.8	6.213235294	5.66E-16
chr8-964	chr8	142500200	142502466	+	34.6	2266	"intron (NR_102363, intron 3 of 27)"	"intron (NR_102363, intron 3 of 27)"	15997	NM_207414	389690	Hs.689547	NM_207414	ENSG00000226807	MROH5	-	maestro heat like repeat family member 5	protein-coding	34.56	6.31	5.477020602	4.08E-12
chr8-966	chr8	142518143	142522554	+	65.9	4411	Intergenic	Intergenic	-3018	NR_102364	389690	Hs.689547	NM_207414	ENSG00000226807	MROH5	-	maestro heat like repeat family member 5	protein-coding	65.93	8.25	7.991515152	2.19E-28
chr8-970	chr8	142704681	142705681	+	17.3	1000	Intergenic	L1MC4|LINE|L1	162493	NR_031636	100302147		NR_031636	ENSG00000221768	MIR1302-7	MIRN1302-7|hsa-mir-1302-7	microRNA 1302-7	ncRNA	17.28	3.88	4.453608247	1.81E-05
chr8-972	chr8	143009498	143011058	+	25	1560	Intergenic	MER20|DNA|hAT-Charlie	69379	NR_130468	100616374		NR_130468	ENSG00000265612	MIR4539	-	microRNA 4539	ncRNA	24.96	2.91	8.577319588	5.77E-12
chr8-979	chr8	144822106	144825706	+	54.4	3600	"intron (NR_033849, intron 3 of 3)"	"intron (NR_033849, intron 3 of 3)"	7596	NR_033849	100128338	Hs.493171	NR_033849	ENSG00000203499	FAM83H-AS1	onco-lncRNA-3	FAM83H antisense RNA 1 (head to head)	ncRNA	54.41	6.8	8.001470588	1.13E-23
chr8-981	chr8	326675	332589	+	79.4	5914	"non-coding (NR_103537, exon 3 of 4)"	"non-coding (NR_103537, exon 3 of 4)"	3542	NR_103537	157693	Hs.591390	NR_103537	ENSG00000182366	FAM87A	-	family with sequence similarity 87 member A	ncRNA	79.37	16.5	4.81030303	6.93E-23
chr8-983	chr8	474245	475245	+	17.3	1000	"intron (NM_175075, intron 2 of 3)"	L1MA3|LINE|L1	20100	NM_001256113	157695	Hs.289293	NM_175075	ENSG00000180190	TDRP	C8orf42|Inm01|TDRP1|TDRP2	testis development related protein	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr8-984	chr8	489049	490049	+	16	1000	"intron (NM_175075, intron 2 of 3)"	L1MC4a|LINE|L1	5296	NM_001256113	157695	Hs.289293	NM_175075	ENSG00000180190	TDRP	C8orf42|Inm01|TDRP1|TDRP2	testis development related protein	protein-coding	16	2.91	5.498281787	4.98E-06
chr8-987	chr8	877481	878481	+	16.6	1000	"intron (NM_001346810, intron 2 of 14)"	MamRep605|Unknown|Unknown	189433	NR_134292	401442	Hs.678992	NR_134292	ENSG00000282375	LOC401442	-	uncharacterized LOC401442	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr8-988	chr8	978765	979765	+	16.6	1000	"intron (NM_001346810, intron 2 of 14)"	"intron (NM_001346810, intron 2 of 14)"	271558	NR_111948	286083	Hs.382131	NR_033895	ENSG00000275427	LOC286083	-	uncharacterized LOC286083	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr8-993	chr8	1335371	1336371	+	16.6	1000	"intron (NM_001346810, intron 3 of 14)"	"intron (NM_001346810, intron 3 of 14)"	-85048	NR_111948	286083	Hs.382131	NR_033895	ENSG00000275427	LOC286083	-	uncharacterized LOC286083	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr8-994	chr8	1533865	1535438	+	27.5	1573	"intron (NM_004745, intron 3 of 11)"	MLT1E2|LTR|ERVL-MaLR	35179	NR_103863	100507435	Hs.667133	NR_103863	ENSG00000253267	DLGAP2-AS1	-	DLGAP2 antisense RNA 1	ncRNA	27.52	5.82	4.728522337	1.71E-08
chr9-100	chr9	117063795	117064795	+	22.4	1000	"intron (NM_032888, intron 55 of 60)"	"intron (NM_032888, intron 55 of 60)"	-21008	NM_000607	5004	Hs.522356	NM_000607	ENSG00000229314	ORM1	AGP-A|AGP1|HEL-S-153w|ORM	orosomucoid 1	protein-coding	22.4	0	23.07463312	1.33E-22
chr9-1002	chr9	138374462	138376089	+	23.7	1627	"intron (NM_014811, intron 2 of 3)"	"intron (NM_014811, intron 2 of 3)"	3627	NM_014811	9858	Hs.533260	NM_014811	ENSG00000196422	PPP1R26	KIAA0649|NRBE3	protein phosphatase 1 regulatory subunit 26	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr9-1007	chr9	138652986	138654504	+	25.6	1518	"intron (NM_020822, intron 11 of 30)"	"intron (NM_020822, intron 11 of 30)"	59714	NM_001272003	57582	Hs.104950	NM_020822	ENSG00000107147	KCNT1	EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2	potassium sodium-activated channel subfamily T member 1	protein-coding	25.6	0.97	26.39175258	7.61E-22
chr9-1012	chr9	139034585	139035585	+	16	1000	Intergenic	Intergenic	-24354	NM_152833	90120	Hs.287411	NM_152833	ENSG00000238227	C9orf69	-	chromosome 9 open reading frame 69	protein-coding	16	3.88	4.12371134	7.91E-05
chr9-1013	chr9	139059880	139061175	+	18.6	1295	Intergenic	L1MEc|LINE|L1	34492	NM_014564	8022	Hs.148427	NM_014564	ENSG00000107187	LHX3	CPHD3|LIM3|M2-LHX3	LIM homeobox 3	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr9-1018	chr9	140148040	140149040	+	15.4	1000	promoter-TSS (NR_038389)	promoter-TSS (NR_038389)	-591	NR_038389	100129722	Hs.656347	NR_038389	ENSG00000275549	STPG3-AS1	C9orf173-AS1	STPG3 antisense RNA 1	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr9-1020	chr9	140962535	140963535	+	16.6	1000	"intron (NM_000718, intron 31 of 45)"	"intron (NM_000718, intron 31 of 45)"	-23512	NR_121582	101928786	Hs.678847	NR_121582		LOC101928786	-	uncharacterized LOC101928786	ncRNA	16.64	3.4	4.894117647	4.51E-06
chr9-1022	chr9	562808	563808	+	16	1000	"intron (NM_001256877, intron 2 of 12)"	"intron (NM_001256877, intron 2 of 12)"	58613	NM_015158	23189	Hs.306764	NM_015158	ENSG00000107104	KANK1	ANKRD15|CPSQ2|KANK	KN motif and ankyrin repeat domains 1	protein-coding	16	2.91	5.498281787	4.98E-06
chr9-1024	chr9	33675961	33678188	+	46.1	2227	promoter-TSS (NR_103745)	promoter-TSS (NR_103745)	-192	NR_103745	101243555	Hs.598470	NR_103745	ENSG00000281128	PTENP1-AS	PTENP1as|PTENpg1-asRNA	PTENP1 antisense RNA	ncRNA	46.09	8.74	5.273455378	3.81E-15
chr9-1028	chr9	34681402	34682402	+	15.4	1000	Intergenic	MLT1A|LTR|ERVL-MaLR	9372	NM_006274	6363	Hs.50002	NM_006274	ENSG00000172724	CCL19	CKb11|ELC|MIP-3b|MIP3B|SCYA19	C-C motif chemokine ligand 19	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr9-1031	chr9	34717331	34718331	+	15.4	1000	Intergenic	Intergenic	-7667	NM_002989	6366	Hs.57907	NM_002989	ENSG00000137077	CCL21	6Ckine|CKb9|ECL|SCYA21|SLC|TCA4	C-C motif chemokine ligand 21	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-1034	chr9	35552316	35553316	+	14.7	1000	"intron (NM_001135999, intron 2 of 11)"	L3|LINE|CR1	11080	NM_001099951	730112	Hs.98959	NM_001099951	ENSG00000215187	FAM166B	-	family with sequence similarity 166 member B	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr9-1035	chr9	35559472	35560785	+	17.9	1313	"exon (NM_014806, exon 10 of 12)"	"exon (NM_014806, exon 10 of 12)"	3768	NM_001099951	730112	Hs.98959	NM_001099951	ENSG00000215187	FAM166B	-	family with sequence similarity 166 member B	protein-coding	17.92	0	18.4597065	9.96E-18
chr9-1036	chr9	35961183	35963161	+	28.8	1978	Intergenic	MIRc|SINE|MIR	-4021	NM_019897	56656	Hs.553540	NM_019897	ENSG00000278889	OR2S2	OR37A|OST715	olfactory receptor family 2 subfamily S member 2 (gene/pseudogene)	protein-coding	28.8	5.34	5.393258427	7.39E-10
chr9-1040	chr9	36863641	36867775	+	51.2	4134	"intron (NM_001280549, intron 6 of 7)"	"intron (NM_001280549, intron 6 of 7)"	-1403	NR_039766	100616278		NR_039766	ENSG00000264922	MIR4540	-	microRNA 4540	ncRNA	51.21	11.65	4.395708155	4.03E-14
chr9-1042	chr9	37053421	37056301	+	44.8	2880	Intergenic	L2c|LINE|L2	-20385	NM_001280556	5079	Hs.654464	NM_016734	ENSG00000196092	PAX5	ALL3|BSAP	paired box 5	protein-coding	44.81	7.77	5.767052767	6.82E-16
chr9-1043	chr9	37618054	37619408	+	17.9	1354	Intergenic	L2b|LINE|L2	-26095	NM_001134484	401505	Hs.130774	NM_001001790	ENSG00000175768	TOMM5	C9orf105|Tom5|bA613M10.3	translocase of outer mitochondrial membrane 5	protein-coding	17.92	2.91	6.158075601	1.38E-07
chr9-1045	chr9	37650794	37652339	+	28.2	1545	"intron (NM_014907, intron 1 of 15)"	"intron (NM_014907, intron 1 of 15)"	514	NM_014907	22844	Hs.163990	NM_014907	ENSG00000070601	FRMPD1	FRMD2	FERM and PDZ domain containing 1	protein-coding	28.16	3.4	8.282352941	1.50E-13
chr9-1047	chr9	37658618	37659889	+	19.2	1271	"intron (NM_014907, intron 1 of 15)"	"intron (NM_014907, intron 1 of 15)"	8201	NM_014907	22844	Hs.163990	NM_014907	ENSG00000070601	FRMPD1	FRMD2	FERM and PDZ domain containing 1	protein-coding	19.2	4.37	4.393592677	3.16E-06
chr9-1049	chr9	38312180	38313180	+	14.7	1000	Intergenic	Intergenic	-79981	NM_000692	219	Hs.436219	NM_000692	ENSG00000137124	ALDH1B1	ALDH5|ALDHX	aldehyde dehydrogenase 1 family member B1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr9-1051	chr9	69786213	69787213	+	16	1000	Intergenic	CpG	-28929	NR_121570	101928381	Hs.708686	NR_121570		LOC101928381	-	uncharacterized LOC101928381	ncRNA	16	1.46	10.95890411	3.44E-09
chr9-1052	chr9	72577756	72578756	+	16	1000	Intergenic	AluSx|SINE|Alu	-80241	NM_001347990	256691	Hs.547172	NM_153267	ENSG00000165072	MAMDC2	-	MAM domain containing 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr9-1053	chr9	73636722	73637722	+	15.4	1000	"intron (NM_001007471, intron 1 of 24)"	L1MD2|LINE|L1	99292	NM_001007471	80036	Hs.47288	NM_020952	ENSG00000083067	TRPM3	GON-2|LTRPC3|MLSN2	transient receptor potential cation channel subfamily M member 3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr9-1054	chr9	73859134	73860134	+	16	1000	Intergenic	L2c|LINE|L2	-123120	NM_001007471	80036	Hs.47288	NM_020952	ENSG00000083067	TRPM3	GON-2|LTRPC3|MLSN2	transient receptor potential cation channel subfamily M member 3	protein-coding	16	3.88	4.12371134	7.91E-05
chr9-1057	chr9	74197694	74198694	+	14.1	1000	Intergenic	Intergenic	185606	NM_001135820	23670	Hs.494146	NM_013390	ENSG00000135048	TMEM2	-	transmembrane protein 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr9-1060	chr9	75298859	75299859	+	16	1000	"intron (NM_138691, intron 5 of 23)"	L2|LINE|L2	162642	NM_138691	117531	Hs.670211	NM_138691	ENSG00000165091	TMC1	DFNA36|DFNB11|DFNB7	transmembrane channel like 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr9-1061	chr9	75407703	75408703	+	16	1000	"intron (NM_138691, intron 17 of 23)"	L1PA14|LINE|L1	80822	NR_121180	101927258	Hs.586433	NR_121120	ENSG00000236849	LINC01474	-	long intergenic non-protein coding RNA 1474	ncRNA	16	0.97	16.49484536	3.54E-11
chr9-1067	chr9	86152665	86153665	+	14.7	1000	"5' UTR (NM_174938, exon 1 of 14)"	"5' UTR (NM_174938, exon 1 of 14)"	183	NM_001244959	257019	Hs.127535	NM_174938	ENSG00000172159	FRMD3	4.1O|EPB41L4O|EPB41LO|P410	FERM domain containing 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr9-1068	chr9	87600294	87601294	+	14.7	1000	"intron (NM_001018064, intron 15 of 16)"	"intron (NM_001018064, intron 15 of 16)"	315502	NM_001018064	4915	Hs.494312	NM_006180	ENSG00000148053	NTRK2	GP145-TrkB|TRKB|trk-B	neurotrophic receptor tyrosine kinase 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr9-1071	chr9	88718287	88719739	+	22.4	1452	Intergenic	MLT1D|LTR|ERVL-MaLR	-3897	NM_177937	51280	Hs.494337	NM_016548	ENSG00000135052	GOLM1	C9orf155|GOLPH2|GP73|HEL46|PSEC0257|bA379P1.3	golgi membrane protein 1	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr9-1072	chr9	89197718	89198718	+	14.1	1000	Intergenic	AluY|SINE|Alu	-228816	NM_001185059	79670	Hs.597057	NM_024617	ENSG00000083223	ZCCHC6	PAPD6|TUT7	zinc finger CCHC-type containing 6	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr9-1075	chr9	89588863	89589863	+	16	1000	"intron (NR_049794, intron 2 of 6)"	"intron (NR_049794, intron 2 of 6)"	25750	NR_049794	100506834	Hs.553987	NR_049794	ENSG00000226237	GAS1RR	LncRNA-Hh	GAS1 adjacent regulatory RNA	ncRNA	16	2.91	5.498281787	4.98E-06
chr9-1076	chr9	89820567	89821567	+	13.4	1000	Intergenic	Intergenic	57508	NM_001001709	401535	Hs.657740	NM_001001709		C9orf170	-	chromosome 9 open reading frame 170	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr9-1079	chr9	89851631	89852631	+	15.4	1000	Intergenic	Intergenic	88572	NM_001001709	401535	Hs.657740	NM_001001709		C9orf170	-	chromosome 9 open reading frame 170	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr9-1082	chr9	90627195	90628195	+	14.7	1000	Intergenic	Intergenic	-38000	NM_178432	23552	Hs.522274	NM_012119	ENSG00000156345	CDK20	CCRK|CDCH|P42|PNQALRE	cyclin dependent kinase 20	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr9-1086	chr9	91781683	91783377	+	26.2	1694	"intron (NM_016848, intron 1 of 11)"	"intron (NM_016848, intron 1 of 11)"	11152	NM_016848	53358	Hs.292737	NM_016848	ENSG00000148082	SHC3	N-Shc|NSHC|RAI|SHCC	SHC adaptor protein 3	protein-coding	26.24	4.37	6.004576659	7.40E-10
chr9-1089	chr9	92251624	92252624	+	14.7	1000	Intergenic	Intergenic	-2574	NR_024280	100129066	Hs.125947	NR_024280	ENSG00000237372	UNQ6494	-	uncharacterized LOC100129066	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr9-1090	chr9	92271770	92274056	+	33.9	2286	"intron (NR_024280, intron 1 of 5)"	"intron (NR_024280, intron 1 of 5)"	18215	NR_024280	100129066	Hs.125947	NR_024280	ENSG00000237372	UNQ6494	-	uncharacterized LOC100129066	ncRNA	33.92	7.28	4.659340659	4.51E-10
chr9-1091	chr9	92319820	92320820	+	14.7	1000	"intron (NR_024280, intron 5 of 5)"	AluSp|SINE|Alu	65622	NR_024280	100129066	Hs.125947	NR_024280	ENSG00000237372	UNQ6494	-	uncharacterized LOC100129066	ncRNA	14.72	2.43	6.057613169	5.07E-06
chr9-1095	chr9	92764173	92765173	+	14.1	1000	Intergenic	Intergenic	21144	NR_036253	100422963		NR_036253	ENSG00000263967	MIR4290	-	microRNA 4290	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr9-1096	chr9	92831482	92833199	+	28.2	1717	Intergenic	MLT1G|LTR|ERVL-MaLR	-28559	NR_038882	286370	Hs.407589	NR_038882	ENSG00000227555	MIR4290HG	-	MIR4290 host gene	ncRNA	28.16	4.37	6.443935927	1.84E-11
chr9-1097	chr9	92859336	92860336	+	15.4	1000	Intergenic	Intergenic	-56055	NR_038882	286370	Hs.407589	NR_038882	ENSG00000227555	MIR4290HG	-	MIR4290 host gene	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr9-1098	chr9	92877496	92878496	+	14.7	1000	Intergenic	Intergenic	-74215	NR_038882	286370	Hs.407589	NR_038882	ENSG00000227555	MIR4290HG	-	MIR4290 host gene	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr9-1102	chr9	94187030	94190925	+	54.4	3895	Intergenic	Intergenic	-2069	NM_001290000	4783	Hs.79334	NM_005384	ENSG00000165030	NFIL3	E4BP4|IL3BP1|NF-IL3A|NFIL3A	"nuclear factor, interleukin 3 regulated"	protein-coding	54.41	6.31	8.622820919	7.25E-25
chr9-1103	chr9	94193932	94194932	+	15.4	1000	Intergenic	LTR16D|LTR|ERVL	-7524	NM_001290000	4783	Hs.79334	NM_005384	ENSG00000165030	NFIL3	E4BP4|IL3BP1|NF-IL3A|NFIL3A	"nuclear factor, interleukin 3 regulated"	protein-coding	15.36	0	15.82260557	1.26E-14
chr9-1105	chr9	94484495	94486458	+	31.4	1963	"3' UTR (NM_004560, exon 9 of 9)"	"3' UTR (NM_004560, exon 9 of 9)"	-86849	NR_037489	100500902		NR_037489	ENSG00000283351	MIR3910-2	mir-3910-2	microRNA 3910-2	ncRNA	31.36	5.34	5.872659176	2.29E-11
chr9-1109	chr9	94651550	94653029	+	21.8	1479	"intron (NM_004560, intron 1 of 8)"	"intron (NM_004560, intron 1 of 8)"	60155	NM_004560	4920	Hs.98255	NM_004560	ENSG00000169071	ROR2	BDB|BDB1|NTRKR2	receptor tyrosine kinase like orphan receptor 2	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr9-1112	chr9	94908830	94909830	+	14.7	1000	"intron (NR_027341, intron 1 of 3)"	"intron (NR_027341, intron 1 of 3)"	5581	NR_027341	158314	Hs.149940	NR_027341		LINC00475	C9orf44	long intergenic non-protein coding RNA 475	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr9-1115	chr9	96068317	96069317	+	14.7	1000	"intron (NM_001282394, intron 26 of 29)"	"intron (NM_001282394, intron 26 of 29)"	39879	NM_001098808	445577	Hs.575636	NM_001098808	ENSG00000204352	C9orf129	bA165J3.3	chromosome 9 open reading frame 129	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr9-1119	chr9	96715587	96716587	+	16	1000	"intron (NM_021570, intron 1 of 3)"	CpG-26762	1521	NM_021570	56033	Hs.164960	NM_021570	ENSG00000131668	BARX1	-	BARX homeobox 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr9-1122	chr9	97300755	97301755	+	14.7	1000	Intergenic	Intergenic	-16072	NR_121569	101928099	Hs.674409	NR_121566	ENSG00000231806	PCAT7	PCAN-R2	prostate cancer associated transcript 7 (non-protein coding)	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr9-1125	chr9	98394170	98395170	+	15.4	1000	Intergenic	MER91A|DNA|hAT-Tip100	-115423	NM_001083603	5727	Hs.494538	NM_000264	ENSG00000185920	PTCH1	BCNS|HPE7|NBCCS|PTC|PTC1|PTCH|PTCH11	patched 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-1129	chr9	98969708	98970708	+	16	1000	Intergenic	AluJb|SINE|Alu	-91515	NR_132344	158434	Hs.381771	NM_001256408	ENSG00000275465	LOC158434	-	uncharacterized LOC158434	ncRNA	16	3.88	4.12371134	7.91E-05
chr9-113	chr9	98999219	99000734	+	29.4	1515	"intron (NM_000197, intron 10 of 10)"	"intron (NM_000197, intron 10 of 10)"	64458	NM_000197	3293	Hs.477	NM_000197	ENSG00000130948	HSD17B3	EDH17B3|SDR12C2	hydroxysteroid 17-beta dehydrogenase 3	protein-coding	29.44	2.91	10.11683849	7.13E-16
chr9-1130	chr9	98977733	98979057	+	17.3	1324	Intergenic	LTR16C|LTR|ERVL	86039	NM_000197	3293	Hs.477	NM_000197	ENSG00000130948	HSD17B3	EDH17B3|SDR12C2	hydroxysteroid 17-beta dehydrogenase 3	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr9-1133	chr9	99087075	99088075	+	15.4	1000	"intron (NM_001286990, intron 6 of 8)"	"intron (NM_001286990, intron 6 of 8)"	-23141	NM_000197	3293	Hs.477	NM_000197	ENSG00000130948	HSD17B3	EDH17B3|SDR12C2	hydroxysteroid 17-beta dehydrogenase 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr9-1134	chr9	100611332	100612681	+	21.8	1349	Intergenic	Intergenic	-3531	NM_004473	2304	Hs.159234	NM_004473	ENSG00000178919	FOXE1	FKHL15|FOXE2|HFKH4|HFKL5|NMTC4|TITF2|TTF-2|TTF2	forkhead box E1	protein-coding	21.76	4.37	4.979405034	1.32E-07
chr9-1135	chr9	100622408	100623800	+	24.3	1392	Intergenic	Intergenic	7567	NM_004473	2304	Hs.159234	NM_004473	ENSG00000178919	FOXE1	FKHL15|FOXE2|HFKH4|HFKL5|NMTC4|TITF2|TTF-2|TTF2	forkhead box E1	protein-coding	24.32	2.43	10.00823045	2.59E-13
chr9-1136	chr9	101065778	101066778	+	15.4	1000	"intron (NM_005458, intron 15 of 18)"	"intron (NM_005458, intron 15 of 18)"	-48275	NM_018421	55357	Hs.371016	NM_018421	ENSG00000095383	TBC1D2	PARIS-1|PARIS1|TBC1D2A	TBC1 domain family member 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr9-1141	chr9	101738092	101739450	+	19.8	1358	"intron (NM_001855, intron 2 of 41)"	"intron (NM_001855, intron 2 of 41)"	32776	NM_001855	1306	Hs.409034	NM_001855	ENSG00000204291	COL15A1	-	collagen type XV alpha 1 chain	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr9-1143	chr9	101952406	101953406	+	14.7	1000	Intergenic	L2c|LINE|L2	31340	NM_033087	85365	Hs.40919	NM_033087	ENSG00000119523	ALG2	CDG1I|CDGIi|CMS14|CMSTA3|NET38|hALPG2	"ALG2, alpha-1,3/1,6-mannosyltransferase"	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr9-1144	chr9	102117444	102118785	+	17.9	1341	"intron (NR_102271, intron 5 of 5)"	L2c|LINE|L2	19425	NR_102270	100996569	Hs.745280	NR_102270	ENSG00000271086	NAMA	-	"non-protein coding RNA, associated with MAP kinase pathway and growth arrest"	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr9-1146	chr9	104502339	104503339	+	15.4	1000	Intergenic	Intergenic	-1977	NM_133445	116443	Hs.654783	NM_133445	ENSG00000198785	GRIN3A	GluN3A|NMDAR-L|NR3A	glutamate ionotropic receptor NMDA type subunit 3A	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr9-1149	chr9	109803399	109804399	+	15.4	1000	"intron (NR_126029, intron 4 of 4)"	MLT1A|LTR|ERVL-MaLR	61370	NR_126029	340512	Hs.432529	NR_126029	ENSG00000230782	LOC340512	-	uncharacterized LOC340512	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr9-1152	chr9	111955230	111956230	+	15.4	1000	"intron (NM_019114, intron 21 of 25)"	MIRb|SINE|MIR	-26159	NM_014334	23732	Hs.347537	NM_014334	ENSG00000260230	FRRS1L	C9orf4|CG-6|CG6|EIEE37	ferric chelate reductase 1 like	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-1156	chr9	112638301	112639301	+	15.4	1000	"intron (NM_001037293, intron 3 of 6)"	AluSx1|SINE|Alu	96224	NM_007203	445815	Hs.591908	NM_007203	ENSG00000157654	PALM2-AKAP2	AKAP2	PALM2-AKAP2 readthrough	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr9-1157	chr9	115674441	115675441	+	15.4	1000	Intergenic	AluJo|SINE|Alu	-21748	NM_033051	57864	Hs.512668	NM_033051	ENSG00000119457	SLC46A2	Ly110|TSCOT	solute carrier family 46 member 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr9-1158	chr9	115685844	115686844	+	13.4	1000	Intergenic	L1MB4|LINE|L1	-33151	NM_033051	57864	Hs.512668	NM_033051	ENSG00000119457	SLC46A2	Ly110|TSCOT	solute carrier family 46 member 2	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr9-1164	chr9	116932542	116933895	+	21.8	1353	"intron (NM_032888, intron 3 of 60)"	"intron (NM_032888, intron 3 of 60)"	15393	NM_032888	85301	Hs.494892	NM_032161	ENSG00000196739	COL27A1	STLS	collagen type XXVII alpha 1 chain	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr9-1165	chr9	116961368	116962368	+	13.4	1000	"intron (NM_032888, intron 7 of 60)"	"intron (NM_032888, intron 7 of 60)"	-9846	NR_030255	619556		NR_030255	ENSG00000207726	MIR455	MIRN455|hsa-mir-455|mir-455	microRNA 455	ncRNA	13.44	0.97	13.8556701	8.12E-09
chr9-1170	chr9	124212727	124213987	+	17.9	1260	Intergenic	Intergenic	48949	NR_045211	2681	Hs.97469	NR_003191	ENSG00000204136	GGTA1P	GGTA|GGTA1|GLYT2|a1/3GTP	"glycoprotein, alpha-galactosyltransferase 1 pseudogene"	pseudo	17.92	3.88	4.618556701	3.85E-06
chr9-1172	chr9	124293434	124295055	+	21.1	1621	Intergenic	AluSx1|SINE|Alu	-31938	NR_003191	2681	Hs.97469	NR_003191	ENSG00000204136	GGTA1P	GGTA|GGTA1|GLYT2|a1/3GTP	"glycoprotein, alpha-galactosyltransferase 1 pseudogene"	pseudo	21.12	1.94	10.88659794	9.02E-12
chr9-1176	chr9	124958751	124959751	+	15.4	1000	"intron (NM_198469, intron 4 of 4)"	L2a|LINE|L2	24768	NM_001242335	26468	Hs.103137	NM_014368	ENSG00000106852	LHX6	LHX6.1	LIM homeobox 6	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr9-1179	chr9	125453560	125454560	+	15.4	1000	Intergenic	L1M2|LINE|L1	16651	NM_001005234	26735	Hs.626839	NM_001005234	ENSG00000171481	OR1L3	OR9-28|OR9-D	olfactory receptor family 1 subfamily L member 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-1183	chr9	126880757	126881757	+	14.1	1000	Intergenic	Intergenic	107368	NM_004789	9355	Hs.696425	NM_004789	ENSG00000106689	LHX2	LH2|hLhx2	LIM homeobox 2	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr9-1184	chr9	127239846	127240846	+	15.4	1000	Intergenic	CpG	29353	NM_004959	2516	Hs.495108	NM_004959	ENSG00000136931	NR5A1	AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXY3|hSF-1	nuclear receptor subfamily 5 group A member 1	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr9-1186	chr9	128984605	128985874	+	19.8	1269	Intergenic	CpG	52955	NR_121584	101929116	Hs.382124	NR_121584	ENSG00000228392	LOC101929116	-	uncharacterized LOC101929116	ncRNA	19.84	2.91	6.817869416	2.07E-08
chr9-1188	chr9	129278266	129279655	+	21.8	1389	Intergenic	Intergenic	-97762	NM_001174147	4010	Hs.129133	NM_002316	ENSG00000136944	LMX1B	LMX1.2|NPS1	LIM homeobox transcription factor 1 beta	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr9-1191	chr9	129287564	129293924	+	89	6360	Intergenic	Intergenic	-85978	NM_001174147	4010	Hs.129133	NM_002316	ENSG00000136944	LMX1B	LMX1.2|NPS1	LIM homeobox transcription factor 1 beta	protein-coding	88.97	20.87	4.26305702	2.81E-22
chr9-1193	chr9	129369716	129370716	+	15.4	1000	Intergenic	Intergenic	-6506	NM_001174147	4010	Hs.129133	NM_002316	ENSG00000136944	LMX1B	LMX1.2|NPS1	LIM homeobox transcription factor 1 beta	protein-coding	15.36	0	15.82260557	1.26E-14
chr9-1203	chr9	129546199	129547199	+	15.4	1000	Intergenic	L1M5|LINE|L1	-20586	NM_014007	23099	Hs.355581	NM_014007	ENSG00000169155	ZBTB43	ZBTB22B|ZNF-X|ZNF297B	zinc finger and BTB domain containing 43	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr9-1205	chr9	130091460	130092460	+	14.7	1000	"intron (NM_032293, intron 7 of 27)"	"intron (NM_032293, intron 7 of 27)"	65204	NM_032293	84253	Hs.29304	NM_032293	ENSG00000136895	GARNL3	bA356B19.1	GTPase activating Rap/RanGAP domain like 3	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr9-1206	chr9	130102859	130105083	+	36.5	2224	"intron (NM_032293, intron 13 of 27)"	"intron (NM_032293, intron 13 of 27)"	-55446	NM_001271712	29988	Hs.179522	NM_014580	ENSG00000136856	SLC2A8	GLUT8|GLUTX1	solute carrier family 2 member 8	protein-coding	36.48	5.82	6.268041237	1.09E-13
chr9-1210	chr9	130137566	130138566	+	14.7	1000	"intron (NM_032293, intron 22 of 27)"	MLT1F1|LTR|ERVL-MaLR	-21351	NM_001271712	29988	Hs.179522	NM_014580	ENSG00000136856	SLC2A8	GLUT8|GLUTX1	solute carrier family 2 member 8	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr9-1212	chr9	131938217	131939925	+	28.8	1708	"3' UTR (NM_203434, exon 1 of 1)"	"3' UTR (NM_203434, exon 1 of 1)"	1469	NM_203434	389792	Hs.529857	NM_203434	ENSG00000188483	IER5L	bA247A12.2	immediate early response 5 like	protein-coding	28.8	0	29.66738544	3.30E-31
chr9-1213	chr9	131957804	131958804	+	15.4	1000	Intergenic	MLT1J|LTR|ERVL-MaLR	-17764	NM_203434	389792	Hs.529857	NM_203434	ENSG00000188483	IER5L	bA247A12.2	immediate early response 5 like	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr9-1221	chr9	132267754	132268754	+	15.4	1000	"intron (NR_038955, intron 4 of 4)"	AluJb|SINE|Alu	17315	NR_038955	100506190	Hs.529860	NR_038955		LINC00963	-	long intergenic non-protein coding RNA 963	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr9-1226	chr9	132521990	132523575	+	17.9	1585	Intergenic	AluJo|SINE|Alu	-7438	NM_004878	9536	Hs.146688	NM_004878	ENSG00000148344	PTGES	MGST-IV|MGST1-L1|MGST1L1|MPGES|PGES|PIG12|PP102|PP1294|TP53I12|mPGES-1	prostaglandin E synthase	protein-coding	17.92	3.88	4.618556701	3.85E-06
chr9-1228	chr9	132932881	132933881	+	14.1	1000	Intergenic	Intergenic	-1476	NM_014286	23413	Hs.642946	NM_014286	ENSG00000107130	NCS1	FLUP|FREQ	neuronal calcium sensor 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr9-1229	chr9	133252480	133253480	+	16	1000	"intron (NM_001291815, intron 41 of 86)"	"intron (NM_001291815, intron 41 of 86)"	-67114	NM_054012	445	Hs.160786	NM_000050	ENSG00000130707	ASS1	ASS|CTLN1	argininosuccinate synthase 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr9-1230	chr9	133801544	133802544	+	16	1000	"intron (NM_001145106, intron 3 of 7)"	AluSx1|SINE|Alu	12195	NM_032843	84929	Hs.133205	NM_032843	ENSG00000130720	FIBCD1	-	fibrinogen C domain containing 1	protein-coding	16	0	16.4818808	1.26E-14
chr9-1238	chr9	136098215	136099215	+	15.4	1000	Intergenic	Intergenic	-14078	NR_110243	29989	Hs.449629	NM_014581	ENSG00000171102	OBP2B	LCN14|OBPIIb	odorant binding protein 2B	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-1239	chr9	136122332	136123332	+	15.4	1000	Intergenic	Intergenic	27798	NM_020469	28	Hs.654423	NM_020469	ENSG00000175164	ABO	A3GALNT|A3GALT1|GTB|NAGAT	"ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-1241	chr9	136168532	136169532	+	16	1000	Intergenic	HUERS-P1-int|LTR|ERV1	-18402	NM_020469	28	Hs.654423	NM_020469	ENSG00000175164	ABO	A3GALNT|A3GALT1|GTB|NAGAT	"ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase"	protein-coding	16	2.91	5.498281787	4.98E-06
chr9-1244	chr9	137036399	137037984	+	26.2	1585	Intergenic	Intergenic	-7505	NR_023344	100151684	Hs.545589	NR_023344	ENSG00000221676	RNU6ATAC	RNU6ATAC1|U6ATAC	"RNA, U6atac small nuclear (U12-dependent splicing)"	snRNA	26.24	0.97	27.05154639	7.61E-22
chr9-1245	chr9	137204678	137208184	+	65.9	3506	Intergenic	MIRb|SINE|MIR	-11878	NM_002957	6256	Hs.590886	NM_002957	ENSG00000186350	RXRA	NR2B1	retinoid X receptor alpha	protein-coding	65.93	8.74	7.543478261	2.79E-27
chr9-1249	chr9	137246115	137249002	+	37.1	2887	"intron (NM_002957, intron 1 of 9)"	"intron (NM_002957, intron 1 of 9)"	-23583	NM_001291920	6256	Hs.590886	NM_002957	ENSG00000186350	RXRA	NR2B1	retinoid X receptor alpha	protein-coding	37.12	2.91	12.75601375	2.83E-22
chr9-1251	chr9	137514592	137515592	+	15.4	1000	Intergenic	Intergenic	-18559	NM_001278074	1289	Hs.210283	NM_000093	ENSG00000130635	COL5A1	EDSC	collagen type V alpha 1 chain	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr9-1253	chr9	137573849	137574849	+	16	1000	"intron (NM_001278074, intron 1 of 65)"	"intron (NM_001278074, intron 1 of 65)"	-29660	NR_138049	414316	Hs.571561	NR_138049		COL5A1-AS1	C9orf104|bA54A22.4	COL5A1 antisense RNA 1	ncRNA	16	2.91	5.498281787	4.98E-06
chr9-1256	chr9	137723273	137725413	+	32.6	2140	"intron (NM_001278074, intron 64 of 65)"	"intron (NM_001278074, intron 64 of 65)"	16872	NR_039691	100616333		NR_039691	ENSG00000264744	MIR3689C	-	microRNA 3689c	ncRNA	32.64	4.85	6.729896907	5.03E-13
chr9-1262	chr9	137969517	137970517	+	14.7	1000	"intron (NM_014279, intron 1 of 5)"	"intron (NM_014279, intron 1 of 5)"	2914	NM_006334	10439	Hs.522484	NM_006334	ENSG00000130558	OLFM1	AMY|NOE1|NOELIN1|OlfA	olfactomedin 1	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr9-1263	chr9	137993602	137995101	+	21.8	1499	"intron (NM_014279, intron 4 of 5)"	"intron (NM_014279, intron 4 of 5)"	14837	NM_001282611	10439	Hs.522484	NM_006334	ENSG00000130558	OLFM1	AMY|NOE1|NOELIN1|OlfA	olfactomedin 1	protein-coding	21.76	2.43	8.95473251	2.49E-11
chr9-1264	chr9	138000601	138001601	+	12.8	1000	"intron (NM_014279, intron 5 of 5)"	"intron (NM_014279, intron 5 of 5)"	21587	NM_001282611	10439	Hs.522484	NM_006334	ENSG00000130558	OLFM1	AMY|NOE1|NOELIN1|OlfA	olfactomedin 1	protein-coding	12.8	2.43	5.267489712	2.99E-05
chr9-1266	chr9	138115004	138116004	+	15.4	1000	Intergenic	Intergenic	42049	NR_046107	401557	Hs.640138	NR_046107		LOC401557	-	uncharacterized LOC401557	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr9-1267	chr9	138166668	138167668	+	16	1000	Intergenic	MIRb|SINE|MIR	-67927	NM_173520	157927	Hs.559511	NM_173520		C9orf62	-	chromosome 9 open reading frame 62	protein-coding	16	2.91	5.498281787	4.98E-06
chr9-1271	chr9	138206683	138209142	+	37.8	2459	Intergenic	L1MEg|LINE|L1	-27183	NM_173520	157927	Hs.559511	NM_173520		C9orf62	-	chromosome 9 open reading frame 62	protein-coding	37.76	6.8	5.552941176	7.17E-13
chr9-1276	chr9	138516846	138517846	+	16	1000	"intron (NM_182974, intron 4 of 4)"	LTR71B|LTR|ERV1	14040	NM_182974	360203	Hs.522491	NM_182974	ENSG00000204007	GLT6D1	GLTDC1|GT6M7	glycosyltransferase 6 domain containing 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr9-1277	chr9	138526607	138528161	+	23	1554	"intron (NM_182974, intron 2 of 4)"	L1MC3|LINE|L1	4002	NM_182974	360203	Hs.522491	NM_182974	ENSG00000204007	GLT6D1	GLTDC1|GT6M7	glycosyltransferase 6 domain containing 1	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr9-1279	chr9	138673199	138674522	+	21.8	1323	"intron (NM_020822, intron 24 of 30)"	AluSx|SINE|Alu	79829	NM_001272003	57582	Hs.104950	NM_020822	ENSG00000107147	KCNT1	EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2	potassium sodium-activated channel subfamily T member 1	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr9-128	chr9	37670778	37672311	+	26.9	1533	"intron (NM_014907, intron 1 of 15)"	L2c|LINE|L2	20492	NM_014907	22844	Hs.163990	NM_014907	ENSG00000070601	FRMPD1	FRMD2	FERM and PDZ domain containing 1	protein-coding	26.88	6.31	4.259904913	6.42E-08
chr9-1280	chr9	138679322	138681040	+	26.2	1718	"intron (NM_001272003, intron 29 of 30)"	"intron (NM_001272003, intron 29 of 30)"	86150	NM_001272003	57582	Hs.104950	NM_020822	ENSG00000107147	KCNT1	EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2	potassium sodium-activated channel subfamily T member 1	protein-coding	26.24	1.94	13.5257732	4.03E-16
chr9-1281	chr9	138872548	138875222	+	37.8	2674	Intergenic	CpG	-20659	NM_016172	10422	Hs.9194	NM_016172	ENSG00000130560	UBAC1	GBDR1|KPC2|UBADC1	UBA domain containing 1	protein-coding	37.76	2.91	12.97594502	2.83E-22
chr9-1283	chr9	138884767	138885767	+	15.4	1000	Intergenic	MIRc|SINE|MIR	-32041	NM_016172	10422	Hs.9194	NM_016172	ENSG00000130560	UBAC1	GBDR1|KPC2|UBADC1	UBA domain containing 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr9-1284	chr9	138948304	138949560	+	17.3	1256	"intron (NM_144653, intron 1 of 5)"	"intron (NM_144653, intron 1 of 5)"	38199	NM_144653	138151	Hs.112895	NM_144653	ENSG00000148411	NACC2	BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB	NACC family member 2	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr9-1289	chr9	139086328	139090676	+	80.7	4348	"3' UTR (NM_014564, exon 6 of 6)"	"3' UTR (NM_014564, exon 6 of 6)"	6517	NM_014564	8022	Hs.148427	NM_014564	ENSG00000107187	LHX3	CPHD3|LIM3|M2-LHX3	LIM homeobox 3	protein-coding	80.65	15.53	5.193174501	6.52E-25
chr9-129	chr9	91298203	91299458	+	25	1255	Intergenic	AluSx|SINE|Alu	-31755	NM_001100111	286238	Hs.434185	NM_001100111	ENSG00000228189	LOC286238	-	uncharacterized LOC286238	ncRNA	24.96	3.88	6.432989691	6.68E-10
chr9-1292	chr9	139152831	139153831	+	15.4	1000	Intergenic	Intergenic	-15644	NM_181701	169714	Hs.144073	NM_181701	ENSG00000165661	QSOX2	QSCN6L1|SOXN	quiescin sulfhydryl oxidase 2	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr9-1293	chr9	139218743	139225044	+	92.8	6301	promoter-TSS (NM_001145638)	promoter-TSS (NM_001145638)	-39	NM_001145638	26086	Hs.239370	NM_015597	ENSG00000160360	GPSM1	AGS3	G-protein signaling modulator 1	protein-coding	92.81	9.71	9.558187436	2.07E-44
chr9-1299	chr9	139944255	139945255	+	16	1000	"exon (NM_001246, exon 6 of 9)"	"exon (NM_001246, exon 6 of 9)"	3748	NM_203468	954	Hs.123036	NM_001246	ENSG00000054179	ENTPD2	CD39L1|NTPDase-2	ectonucleoside triphosphate diphosphohydrolase 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr9-1300	chr9	140192599	140193599	+	14.7	1000	TTS (NM_001004354)	TTS (NM_001004354)	3604	NM_001004354	441478	Hs.535075	NM_001004354	ENSG00000198435	NRARP	-	NOTCH-regulated ankyrin repeat protein	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr9-1304	chr9	140971573	140972573	+	15.4	1000	"intron (NM_000718, intron 34 of 45)"	L2|LINE|L2	-32550	NR_121582	101928786	Hs.678847	NR_121582		LOC101928786	-	uncharacterized LOC101928786	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr9-1305	chr9	140974706	140975706	+	15.4	1000	"intron (NM_000718, intron 35 of 45)"	L2|LINE|L2	-35683	NR_121582	101928786	Hs.678847	NR_121582		LOC101928786	-	uncharacterized LOC101928786	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr9-1312	chr9	33791315	33792582	+	17.3	1267	"intron (NM_001197098, intron 1 of 4)"	(CAGG)n|Simple_repeat|Simple_repeat	-3611	NM_002771	5646	Hs.654513	NM_002771	ENSG00000010438	PRSS3	MTG|PRSS4|T9|TRY3|TRY4	"protease, serine 3"	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr9-1315	chr9	34463435	34464435	+	15.4	1000	"intron (NM_001281428, intron 1 of 19)"	"intron (NM_001281428, intron 1 of 19)"	5185	NM_012144	27019	Hs.112667	NM_012144	ENSG00000122735	DNAI1	CILD1|DIC1|ICS1|PCD	dynein axonemal intermediate chain 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-1316	chr9	34573738	34581092	+	105.6	7354	"intron (NM_001842, intron 1 of 8)"	"intron (NM_001842, intron 1 of 8)"	9405	NR_024369	415056	Hs.734229	NR_024369		CNTFR-AS1	-	CNTFR antisense RNA 1	ncRNA	105.61	16.5	6.400606061	6.95E-38
chr9-1322	chr9	34623220	34624220	+	13.4	1000	"intron (NM_001017363, intron 3 of 6)"	CpG	-3200	NM_001281425	11258	Hs.511768	NM_007234	ENSG00000137100	DCTN3	DCTN-22|DCTN22	dynactin subunit 3	protein-coding	13.44	0.97	13.8556701	8.12E-09
chr9-1327	chr9	35287381	35288381	+	15.4	1000	"intron (NM_001330653, intron 7 of 39)"	L2|LINE|L2	-118871	NR_003582	158381	Hs.575661	NR_003581	ENSG00000179766	ATP8B5P	FetA	"ATPase phospholipid transporting 8B5, pseudogene"	pseudo	15.36	3.4	4.517647059	2.25E-05
chr9-1330	chr9	35476978	35477978	+	14.1	1000	"intron (NR_003581, intron 14 of 17)"	"intron (NR_003581, intron 14 of 17)"	-12352	NM_014806	9853	Hs.493796	NM_014806	ENSG00000198853	RUSC2	Iporin	RUN and SH3 domain containing 2	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr9-1331	chr9	35488137	35489137	+	15.4	1000	Intergenic	MER51A|LTR|ERV1	-1193	NM_014806	9853	Hs.493796	NM_014806	ENSG00000198853	RUSC2	Iporin	RUN and SH3 domain containing 2	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr9-1332	chr9	35543036	35544036	+	15.4	1000	"intron (NM_001135999, intron 1 of 11)"	L1ME4a|LINE|L1	4907	NM_001135999	9853	Hs.493796	NM_014806	ENSG00000198853	RUSC2	Iporin	RUN and SH3 domain containing 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr9-1333	chr9	35673469	35674469	+	14.1	1000	promoter-TSS (NM_001216)	promoter-TSS (NM_001216)	54	NM_001216	768	Hs.63287	NM_001216	ENSG00000107159	CA9	CAIX|MN	carbonic anhydrase 9	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr9-1334	chr9	35958607	35959607	+	14.7	1000	promoter-TSS (NM_019897)	promoter-TSS (NM_019897)	-956	NM_019897	56656	Hs.553540	NM_019897	ENSG00000278889	OR2S2	OR37A|OST715	olfactory receptor family 2 subfamily S member 2 (gene/pseudogene)	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr9-1337	chr9	36021694	36022694	+	15.4	1000	Intergenic	MIR3|SINE|MIR	-14716	NM_001316345	8434	Hs.388918	NM_021111	ENSG00000122707	RECK	ST15	reversion inducing cysteine rich protein with kazal motifs	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr9-1344	chr9	37031230	37032230	+	14.7	1000	"intron (NM_001280547, intron 1 of 8)"	MIR3|SINE|MIR	2746	NM_001280549	5079	Hs.654464	NM_016734	ENSG00000196092	PAX5	ALL3|BSAP	paired box 5	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr9-1345	chr9	37033912	37038723	+	81.3	4811	Intergenic	CpG	-1841	NM_001280556	5079	Hs.654464	NM_016734	ENSG00000196092	PAX5	ALL3|BSAP	paired box 5	protein-coding	81.29	11.16	7.284050179	1.71E-32
chr9-1352	chr9	38117967	38118967	+	14.1	1000	Intergenic	MIRb|SINE|MIR	-49257	NM_003028	6461	Hs.521482	NM_003028	ENSG00000107338	SHB	bA3J10.2	SH2 domain containing adaptor protein B	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr9-1355	chr9	38246265	38247265	+	15.4	1000	Intergenic	MLT2E|LTR|ERVL	-145896	NM_000692	219	Hs.436219	NM_000692	ENSG00000137124	ALDH1B1	ALDH5|ALDHX	aldehyde dehydrogenase 1 family member B1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr9-1369	chr9	71617194	71618194	+	14.7	1000	"intron (NM_003558, intron 15 of 15)"	AluSz6|SINE|Alu	11345	NM_002732	5568	Hs.158029	NM_002732	ENSG00000165059	PRKACG	BDPLT19|KAPG|PKACg	protein kinase cAMP-activated catalytic subunit gamma	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr9-1374	chr9	74162342	74163342	+	14.7	1000	Intergenic	Intergenic	220958	NM_001135820	23670	Hs.494146	NM_013390	ENSG00000135048	TMEM2	-	transmembrane protein 2	protein-coding	14.72	0.97	15.17525773	5.60E-10
chr9-1378	chr9	78280822	78281822	+	14.7	1000	"intron (NR_031679, intron 1 of 2).2"	MIRb|SINE|MIR	57422	NR_031679	100302287		NR_031679	ENSG00000221698	MIR548H3	MIR548H-3|MIRN548H3|hsa-mir-548h-3	microRNA 548h-3	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr9-1379	chr9	78505995	78508587	+	40.3	2592	"intron (NM_006200, intron 1 of 20)"	"intron (NM_006200, intron 1 of 20)"	1731	NM_001190482	5125	Hs.368542	NM_006200	ENSG00000099139	PCSK5	PC5|PC6|PC6A|SPC6	proprotein convertase subtilisin/kexin type 5	protein-coding	40.33	3.88	10.3943299	5.62E-21
chr9-1385	chr9	79648443	79649443	+	13.4	1000	Intergenic	L1PB4|LINE|L1	14372	NM_001013735	442425	Hs.553843	NM_001013735	ENSG00000204612	FOXB2	bA159H20.4	forkhead box B2	protein-coding	13.44	1.94	6.927835052	4.51E-06
chr9-139	chr9	124980921	124984106	+	58.9	3185	"intron (NM_199160, intron 4 of 8)"	CpG	1506	NM_001242335	26468	Hs.103137	NM_014368	ENSG00000106852	LHX6	LHX6.1	LIM homeobox 6	protein-coding	58.89	6.8	8.660294118	2.26E-27
chr9-1390	chr9	86703058	86704058	+	15.4	1000	"intron (NR_110995, intron 7 of 8)"	Tigger1|DNA|TcMar-Tigger	25200	NR_110995	101927575	Hs.459826	NR_110995	ENSG00000227463	LOC101927575	-	uncharacterized LOC101927575	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr9-1391	chr9	86715488	86716488	+	15.4	1000	Intergenic	MIR3|SINE|MIR	37630	NR_110995	101927575	Hs.459826	NR_110995	ENSG00000227463	LOC101927575	-	uncharacterized LOC101927575	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr9-1392	chr9	86789889	86790889	+	13.4	1000	Intergenic	Intergenic	112031	NR_110995	101927575	Hs.459826	NR_110995	ENSG00000227463	LOC101927575	-	uncharacterized LOC101927575	ncRNA	13.44	0.97	13.8556701	8.12E-09
chr9-1393	chr9	86855903	86857599	+	25.6	1696	Intergenic	Intergenic	98943	NM_001199633	64078	Hs.535966	NM_022127	ENSG00000197506	SLC28A3	CNT3	solute carrier family 28 member 3	protein-coding	25.6	3.4	7.529411765	9.95E-12
chr9-1394	chr9	86913105	86914105	+	15.4	1000	"intron (NM_001199633, intron 6 of 17)"	"intron (NM_001199633, intron 6 of 17)"	42089	NM_001199633	64078	Hs.535966	NM_022127	ENSG00000197506	SLC28A3	CNT3	solute carrier family 28 member 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-1395	chr9	87443658	87444658	+	14.7	1000	"intron (NM_001018064, intron 11 of 16)"	AluSz|SINE|Alu	158866	NM_001018064	4915	Hs.494312	NM_006180	ENSG00000148053	NTRK2	GP145-TrkB|TRKB|trk-B	neurotrophic receptor tyrosine kinase 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr9-1398	chr9	89563610	89564610	+	14.7	1000	"intron (NR_049794, intron 1 of 6)"	"intron (NR_049794, intron 1 of 6)"	497	NR_049794	100506834	Hs.553987	NR_049794	ENSG00000226237	GAS1RR	LncRNA-Hh	GAS1 adjacent regulatory RNA	ncRNA	14.72	2.91	5.058419244	2.67E-05
chr9-140	chr9	126767062	126771716	+	81.9	4654	"non-coding (NR_135129, exon 2 of 2)"	"non-coding (NR_135129, exon 2 of 2)"	2286	NR_135129	100505588	Hs.547168	NR_135129	ENSG00000236668	LOC100505588	-	uncharacterized LOC100505588	ncRNA	81.93	20.39	4.01814615	1.08E-19
chr9-1404	chr9	90007670	90011271	+	42.9	3601	Intergenic	Arthur1|DNA|hAT-Tip100	-102673	NM_001288731	1612	Hs.380277	NM_004938	ENSG00000196730	DAPK1	DAPK	death associated protein kinase 1	protein-coding	42.89	10.68	4.015917603	9.13E-11
chr9-1409	chr9	91896021	91897021	+	14.1	1000	Intergenic	Intergenic	-29589	NM_001827	1164	Hs.83758	NM_001827	ENSG00000123975	CKS2	CKSHS2	CDC28 protein kinase regulatory subunit 2	protein-coding	14.08	1.46	9.643835616	3.66E-08
chr9-1410	chr9	92199805	92200805	+	15.4	1000	Intergenic	L1PA16|LINE|L1	-19622	NM_006705	10912	Hs.9701	NM_006705	ENSG00000130222	GADD45G	CR6|DDIT2|GADD45gamma|GRP17	growth arrest and DNA damage inducible gamma	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-1411	chr9	92209801	92211923	+	32.6	2122	Intergenic	L1MC4|LINE|L1	-9065	NM_006705	10912	Hs.9701	NM_006705	ENSG00000130222	GADD45G	CR6|DDIT2|GADD45gamma|GRP17	growth arrest and DNA damage inducible gamma	protein-coding	32.64	5.82	5.608247423	2.32E-11
chr9-1424	chr9	92760147	92761398	+	21.8	1251	Intergenic	Intergenic	25045	NR_036253	100422963		NR_036253	ENSG00000263967	MIR4290	-	microRNA 4290	ncRNA	21.76	3.4	6.4	3.73E-09
chr9-1425	chr9	92821547	92824800	+	38.4	3253	Intergenic	Intergenic	-19392	NR_038882	286370	Hs.407589	NR_038882	ENSG00000227555	MIR4290HG	-	MIR4290 host gene	ncRNA	38.4	8.74	4.393592677	5.52E-11
chr9-1426	chr9	92828011	92829011	+	14.1	1000	Intergenic	Intergenic	-24730	NR_038882	286370	Hs.407589	NR_038882	ENSG00000227555	MIR4290HG	-	MIR4290 host gene	ncRNA	14.08	0.49	28.73469388	3.99E-13
chr9-1428	chr9	93049483	93050483	+	14.1	1000	Intergenic	ERVL-E-int|LTR|ERVL	145788	NR_109795	101927873	Hs.598482	NR_109795	ENSG00000231107	LINC01508	-	long intergenic non-protein coding RNA 1508	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr9-1431	chr9	93392095	93393095	+	14.1	1000	"intron (NM_017594, intron 1 of 1)"	"intron (NM_017594, intron 1 of 1)"	12792	NM_017594	54769	Hs.165636	NM_017594	ENSG00000165023	DIRAS2	Di-Ras2	DIRAS family GTPase 2	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr9-1433	chr9	93622691	93623691	+	14.7	1000	"intron (NM_001135052, intron 3 of 12)"	"intron (NM_001135052, intron 3 of 12)"	33489	NM_001174167	6850	Hs.371720	NM_003177	ENSG00000165025	SYK	p72-Syk	spleen associated tyrosine kinase	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr9-1434	chr9	94258893	94259893	+	14.1	1000	Intergenic	Intergenic	-72485	NM_001290000	4783	Hs.79334	NM_005384	ENSG00000165030	NFIL3	E4BP4|IL3BP1|NF-IL3A|NFIL3A	"nuclear factor, interleukin 3 regulated"	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr9-1435	chr9	94500489	94501489	+	15.4	1000	"intron (NM_004560, intron 4 of 8)"	"intron (NM_004560, intron 4 of 8)"	-102362	NR_037489	100500902		NR_037489	ENSG00000283351	MIR3910-2	mir-3910-2	microRNA 3910-2	ncRNA	15.36	0.97	15.83505155	3.54E-11
chr9-1436	chr9	94517060	94518060	+	14.7	1000	"intron (NM_004560, intron 4 of 8)"	"intron (NM_004560, intron 4 of 8)"	-118933	NR_037489	100500902		NR_037489	ENSG00000283351	MIR3910-2	mir-3910-2	microRNA 3910-2	ncRNA	14.72	0.97	15.17525773	5.60E-10
chr9-1437	chr9	94532858	94535339	+	39	2481	"intron (NM_004560, intron 2 of 8)"	"intron (NM_004560, intron 2 of 8)"	-135471	NR_037489	100500902		NR_037489	ENSG00000283351	MIR3910-2	mir-3910-2	microRNA 3910-2	ncRNA	39.04	4.85	8.049484536	2.24E-17
chr9-1448	chr9	96001616	96002616	+	14.7	1000	"exon (NM_006648, exon 6 of 29)"	"exon (NM_006648, exon 6 of 29)"	54904	NM_001282394	65268	Hs.654856	NM_006648	ENSG00000165238	WNK2	NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43	WNK lysine deficient protein kinase 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr9-1449	chr9	96004169	96007009	+	50.6	2840	"intron (NM_001282394, intron 6 of 29)"	"intron (NM_001282394, intron 6 of 29)"	58377	NM_001282394	65268	Hs.654856	NM_006648	ENSG00000165238	WNK2	NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43	WNK lysine deficient protein kinase 2	protein-coding	50.57	6.31	8.014263074	4.21E-22
chr9-1451	chr9	96480246	96481246	+	14.7	1000	Intergenic	L1MB5|LINE|L1	-100893	NR_036254	100422927		NR_036254	ENSG00000265347	MIR4291	-	microRNA 4291	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr9-1456	chr9	96759368	96760368	+	15.4	1000	Intergenic	ERVL-E-int|LTR|ERVL	-33208	NM_177995	138639	Hs.437943	NM_152422	ENSG00000158079	PTPDC1	PTP9Q22	protein tyrosine phosphatase domain containing 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-1459	chr9	97350747	97351747	+	14.7	1000	"intron (NM_003837, intron 1 of 6)"	L2a|LINE|L2	4867	NM_003837	8789	Hs.61255	NM_003837	ENSG00000130957	FBP2	-	fructose-bisphosphatase 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr9-1464	chr9	98268218	98269218	+	15.4	1000	"exon (NM_000264, exon 2 of 24)"	"exon (NM_000264, exon 2 of 24)"	763	NM_001083607	5727	Hs.494538	NM_000264	ENSG00000185920	PTCH1	BCNS|HPE7|NBCCS|PTC|PTC1|PTCH|PTCH11	patched 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr9-1465	chr9	98314870	98315870	+	15.4	1000	Intergenic	CpG	-36123	NM_001083603	5727	Hs.494538	NM_000264	ENSG00000185920	PTCH1	BCNS|HPE7|NBCCS|PTC|PTC1|PTCH|PTCH11	patched 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr9-1468	chr9	98505436	98507232	+	26.2	1796	Intergenic	Intergenic	-131566	NM_001010895	375748	Hs.432364	NM_020207	ENSG00000182150	ERCC6L2	BMFS2|C9orf102|RAD26L|SR278	ERCC excision repair 6 like 2	protein-coding	26.24	3.4	7.717647059	9.95E-12
chr9-1469	chr9	98516812	98518452	+	22.4	1640	Intergenic	Intergenic	-120268	NM_001010895	375748	Hs.432364	NM_020207	ENSG00000182150	ERCC6L2	BMFS2|C9orf102|RAD26L|SR278	ERCC excision repair 6 like 2	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr9-1471	chr9	98809266	98810266	+	14.1	1000	Intergenic	Intergenic	-18355	NR_033838	158435	Hs.652615	NR_033838		LOC158435	-	uncharacterized LOC158435	ncRNA	14.08	2.91	4.838487973	2.67E-05
chr9-1473	chr9	98865618	98866618	+	14.1	1000	Intergenic	L1M4b|LINE|L1	12575	NR_132344	158434	Hs.381771	NM_001256408	ENSG00000275465	LOC158434	-	uncharacterized LOC158434	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr9-1485	chr9	100486967	100487967	+	15.4	1000	Intergenic	Intergenic	-27776	NM_000380	7507	Hs.654364	NM_000380	ENSG00000136936	XPA	XP1|XPAC	"XPA, DNA damage recognition and repair factor"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr9-1491	chr9	101026668	101027668	+	15.4	1000	Intergenic	Intergenic	-9165	NM_018421	55357	Hs.371016	NM_018421	ENSG00000095383	TBC1D2	PARIS-1|PARIS1|TBC1D2A	TBC1 domain family member 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr9-1492	chr9	101091557	101092557	+	14.7	1000	"intron (NM_005458, intron 13 of 18)"	"intron (NM_005458, intron 13 of 18)"	-74054	NM_018421	55357	Hs.371016	NM_018421	ENSG00000095383	TBC1D2	PARIS-1|PARIS1|TBC1D2A	TBC1 domain family member 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr9-1493	chr9	101138347	101139347	+	15.4	1000	"intron (NM_005458, intron 11 of 18)"	"intron (NM_005458, intron 11 of 18)"	-120844	NM_018421	55357	Hs.371016	NM_018421	ENSG00000095383	TBC1D2	PARIS-1|PARIS1|TBC1D2A	TBC1 domain family member 2	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-1495	chr9	101294229	101295229	+	14.7	1000	"intron (NM_005458, intron 3 of 18)"	L4|LINE|RTE	176750	NM_005458	9568	Hs.198612	NM_005458	ENSG00000136928	GABBR2	GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099	gamma-aminobutyric acid type B receptor subunit 2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chr9-1500	chr9	101656406	101657406	+	14.1	1000	Intergenic	Intergenic	-49089	NM_001855	1306	Hs.409034	NM_001855	ENSG00000204291	COL15A1	-	collagen type XV alpha 1 chain	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr9-1512	chr9	102601640	102602640	+	14.1	1000	"intron (NM_006981, intron 5 of 7)"	"intron (NM_006981, intron 5 of 7)"	18003	NM_173200	8013	Hs.279522	NM_006981	ENSG00000119508	NR4A3	CHN|CSMF|MINOR|NOR1|TEC	nuclear receptor subfamily 4 group A member 3	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr9-1514	chr9	107688042	107691951	+	78.1	3909	"intron (NM_005502, intron 1 of 49)"	CpG	531	NM_005502	19	Hs.659274	NM_005502	ENSG00000165029	ABCA1	ABC-1|ABC1|CERP|HDLDT1|TGD	ATP binding cassette subfamily A member 1	protein-coding	78.09	12.62	6.187797147	5.12E-28
chr9-1516	chr9	108003731	108004731	+	14.7	1000	Intergenic	X6A_LINE|LINE|CR1	-2655	NM_001330731	23446	Hs.573495	NM_022109	ENSG00000070214	SLC44A1	CD92|CDW92|CHTL1|CTL1	solute carrier family 44 member 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr9-1519	chr9	111398876	111402307	+	42.9	3431	Intergenic	Intergenic	217684	NM_006686	10880	Hs.534390	NM_006686	ENSG00000148156	ACTL7B	Tact1	actin like 7B	protein-coding	42.89	7.77	5.51994852	2.23E-14
chr9-1520	chr9	111533602	111534983	+	20.5	1381	Intergenic	Intergenic	83983	NM_006686	10880	Hs.534390	NM_006686	ENSG00000148156	ACTL7B	Tact1	actin like 7B	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr9-1522	chr9	111557596	111558596	+	15.4	1000	Intergenic	MER52-int|LTR|ERV1	60179	NM_006686	10880	Hs.534390	NM_006686	ENSG00000148156	ACTL7B	Tact1	actin like 7B	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr9-1528	chr9	112619945	112621670	+	27.5	1725	"intron (NM_001037293, intron 2 of 6)"	MIR3|SINE|MIR	78230	NM_007203	445815	Hs.591908	NM_007203	ENSG00000157654	PALM2-AKAP2	AKAP2	PALM2-AKAP2 readthrough	protein-coding	27.52	5.34	5.153558052	3.94E-09
chr9-1529	chr9	113838597	113839597	+	15.4	1000	Intergenic	AluJo|SINE|Alu	-38732	NM_057159	1902	Hs.126667	NM_001401	ENSG00000198121	LPAR1	EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1	lysophosphatidic acid receptor 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chr9-1532	chr9	116363156	116364156	+	14.1	1000	Intergenic	Intergenic	7222	NM_001276262	5998	Hs.494875	NM_017790	ENSG00000138835	RGS3	C2PA|RGP3	regulator of G-protein signaling 3	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr9-1535	chr9	116796308	116798753	+	30.1	2445	"intron (NM_001318040, intron 11 of 13)"	"intron (NM_001318040, intron 11 of 13)"	43222	NM_001633	259	Hs.436911	NM_001633	ENSG00000106927	AMBP	A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI	alpha-1-microglobulin/bikunin precursor	protein-coding	30.08	5.82	5.16838488	6.85E-10
chr9-1541	chr9	117191533	117192533	+	14.1	1000	"intron (NM_015404, intron 3 of 11)"	"intron (NM_015404, intron 3 of 11)"	-3585	NM_001346890	25861	Hs.93836	NM_015404	ENSG00000095397	WHRN	CIP98|DFNB31|PDZD7B|USH2D|WI	whirlin	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr9-1544	chr9	117878971	117879971	+	14.7	1000	"intron (NM_002160, intron 1 of 27)"	MIRb|SINE|MIR	1065	NM_002160	3371	Hs.143250	NM_002160	ENSG00000041982	TNC	150-225|DFNA56|GMEM|GP|HXB|JI|TN|TN-C	tenascin C	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr9-1545	chr9	120138403	120139403	+	14.7	1000	"intron (NM_014010, intron 1 of 21)"	MIRb|SINE|MIR	38414	NM_014010	23245	Hs.601562	NM_014010	ENSG00000148219	ASTN2	bA67K19.1	astrotactin 2	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr9-1547	chr9	120593822	120594822	+	14.7	1000	Intergenic	MIRb|SINE|MIR	127869	NM_138554	7099	Hs.174312	NM_003266	ENSG00000136869	TLR4	ARMD10|CD284|TLR-4|TOLL	toll like receptor 4	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr9-1549	chr9	123081868	123082868	+	14.7	1000	Intergenic	Intergenic	-75040	NR_029604	406939		NR_029604	ENSG00000207814	MIR147A	MIR147|MIRN147|hsa-mir-147a	microRNA 147a	ncRNA	14.72	1.94	7.587628866	6.14E-07
chr9-1552	chr9	124030272	124031832	+	23	1560	"intron (NM_001127662, intron 1 of 16)"	"intron (NM_001127662, intron 1 of 16)"	672	NM_001127662	2934	Hs.522373	NM_000177	ENSG00000148180	GSN	ADF|AGEL	gelsolin	protein-coding	23.04	4.37	5.272311213	2.46E-08
chr9-1554	chr9	124098404	124099404	+	14.1	1000	Intergenic	Intergenic	33678	NR_073037	2040	Hs.253903	NM_004099	ENSG00000148175	STOM	BND7|EPB7|EPB72	stomatin	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr9-1556	chr9	124170952	124171952	+	14.7	1000	Intergenic	MER4A|LTR|ERV1	-38870	NM_198194	2040	Hs.253903	NM_004099	ENSG00000148175	STOM	BND7|EPB7|EPB72	stomatin	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr9-1557	chr9	124204454	124207493	+	43.5	3039	Intergenic	Intergenic	56333	NR_045211	2681	Hs.97469	NR_003191	ENSG00000204136	GGTA1P	GGTA|GGTA1|GLYT2|a1/3GTP	"glycoprotein, alpha-galactosyltransferase 1 pseudogene"	pseudo	43.53	7.28	5.979395604	6.36E-16
chr9-1560	chr9	124226549	124227549	+	15.4	1000	"intron (NR_045211, intron 2 of 5)"	"intron (NR_045211, intron 2 of 5)"	35257	NR_045211	2681	Hs.97469	NR_003191	ENSG00000204136	GGTA1P	GGTA|GGTA1|GLYT2|a1/3GTP	"glycoprotein, alpha-galactosyltransferase 1 pseudogene"	pseudo	15.36	2.43	6.320987654	7.90E-07
chr9-1563	chr9	124328838	124329838	+	14.7	1000	promoter-TSS (NM_032552)	promoter-TSS (NM_032552)	-43	NM_032552	153090	Hs.522378	NM_032552	ENSG00000136848	DAB2IP	AF9Q34|AIP-1|AIP1|DIP1/2	DAB2 interacting protein	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr9-1567	chr9	124466749	124467749	+	14.1	1000	"intron (NM_032552, intron 3 of 16)"	"intron (NM_032552, intron 3 of 16)"	-37815	NM_138709	153090	Hs.522378	NM_032552	ENSG00000136848	DAB2IP	AF9Q34|AIP-1|AIP1|DIP1/2	DAB2 interacting protein	protein-coding	14.08	2.43	5.794238683	5.07E-06
chr9-1574	chr9	127023339	127024339	+	14.7	1000	"intron (NM_001166168, intron 1 of 9)"	"intron (NM_001166168, intron 1 of 9)"	3309	NM_001166168	10783	Hs.197071	NM_014397	ENSG00000119408	NEK6	SID6-1512	NIMA related kinase 6	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr9-1576	chr9	127235772	127236772	+	14.1	1000	Intergenic	Intergenic	33427	NM_004959	2516	Hs.495108	NM_004959	ENSG00000136931	NR5A1	AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXY3|hSF-1	nuclear receptor subfamily 5 group A member 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr9-1583	chr9	129339729	129340729	+	15.4	1000	Intergenic	AluJb|SINE|Alu	-36493	NM_001174147	4010	Hs.129133	NM_002316	ENSG00000136944	LMX1B	LMX1.2|NPS1	LIM homeobox transcription factor 1 beta	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-1589	chr9	129401175	129405685	+	68.5	4510	"intron (NM_001174147, intron 2 of 7)"	"intron (NM_001174147, intron 2 of 7)"	26708	NM_002316	4010	Hs.129133	NM_002316	ENSG00000136944	LMX1B	LMX1.2|NPS1	LIM homeobox transcription factor 1 beta	protein-coding	68.49	10.68	6.412921348	4.41E-25
chr9-159	chr9	74384664	74386284	+	25	1620	Intergenic	MLT1D|LTR|ERVL-MaLR	-1674	NM_013390	23670	Hs.494146	NM_013390	ENSG00000135048	TMEM2	-	transmembrane protein 2	protein-coding	24.96	4.85	5.146391753	2.27E-08
chr9-1596	chr9	129436395	129439581	+	37.1	3186	"intron (NM_001174147, intron 2 of 7)"	AluSc|SINE|Alu	61266	NM_002316	4010	Hs.129133	NM_002316	ENSG00000136944	LMX1B	LMX1.2|NPS1	LIM homeobox transcription factor 1 beta	protein-coding	37.12	8.74	4.247139588	2.45E-10
chr9-1601	chr9	130126022	130127715	+	23.7	1693	"intron (NM_032293, intron 21 of 27)"	MIR3|SINE|MIR	-32549	NM_001271712	29988	Hs.179522	NM_014580	ENSG00000136856	SLC2A8	GLUT8|GLUTX1	solute carrier family 2 member 8	protein-coding	23.68	4.85	4.882474227	1.15E-07
chr9-1602	chr9	130129938	130130938	+	15.4	1000	"intron (NM_032293, intron 22 of 27)"	"intron (NM_032293, intron 22 of 27)"	-28979	NM_001271712	29988	Hs.179522	NM_014580	ENSG00000136856	SLC2A8	GLUT8|GLUTX1	solute carrier family 2 member 8	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr9-1607	chr9	130372018	130373018	+	15.4	1000	Intergenic	Intergenic	-1968	NM_001032221	6812	Hs.288229	NM_003165	ENSG00000136854	STXBP1	MUNC18-1|NSEC1|P67|RBSEC1|UNC18	syntaxin binding protein 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-161	chr9	92214572	92217774	+	64	3202	Intergenic	MER102c|DNA|hAT-Charlie	-3754	NM_006705	10912	Hs.9701	NM_006705	ENSG00000130222	GADD45G	CR6|DDIT2|GADD45gamma|GRP17	growth arrest and DNA damage inducible gamma	protein-coding	64.01	6.8	9.413235294	3.21E-31
chr9-1613	chr9	132028323	132029323	+	14.1	1000	Intergenic	L1MB3|LINE|L1	-15872	NR_121587	101929331	Hs.522428	NR_121587	ENSG00000224307	LOC101929331	-	uncharacterized LOC101929331	ncRNA	14.08	0.97	14.51546392	5.60E-10
chr9-1615	chr9	132095821	132100627	+	85.1	4806	promoter-TSS (NR_120685)	promoter-TSS (NR_120685)	-978	NR_120685	100506119	Hs.624047	NR_120685	ENSG00000233901	LINC01503	-	long intergenic non-protein coding RNA 1503	ncRNA	85.13	14.56	5.846840659	1.25E-28
chr9-1616	chr9	132151817	132152817	+	15.4	1000	Intergenic	Intergenic	53115	NR_120686	100506119	Hs.624047	NR_120685	ENSG00000233901	LINC01503	-	long intergenic non-protein coding RNA 1503	ncRNA	15.36	3.4	4.517647059	2.25E-05
chr9-1623	chr9	132316863	132317863	+	14.7	1000	Intergenic	Intergenic	-53800	NM_001286796	28989	Hs.744027	NM_014064	ENSG00000148335	NTMT1	AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A	N-terminal Xaa-Pro-Lys N-methyltransferase 1	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr9-1624	chr9	132323387	132324863	+	21.8	1476	Intergenic	Intergenic	-47038	NM_001286796	28989	Hs.744027	NM_014064	ENSG00000148335	NTMT1	AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A	N-terminal Xaa-Pro-Lys N-methyltransferase 1	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr9-1627	chr9	132382222	132383607	+	21.8	1385	"5' UTR (NM_199350, exon 1 of 7)"	"5' UTR (NM_199350, exon 1 of 7)"	141	NM_199350	375759	Hs.124223	NM_199350	ENSG00000179058	C9orf50	-	chromosome 9 open reading frame 50	protein-coding	21.76	2.91	7.47766323	3.87E-10
chr9-1629	chr9	132427063	132428063	+	14.1	1000	promoter-TSS (NM_016307)	promoter-TSS (NM_016307)	-357	NM_016307	51450	Hs.660115	NM_016307	ENSG00000167157	PRRX2	PMX2|PRX2	paired related homeobox 2	protein-coding	14.08	0	14.5040551	3.99E-13
chr9-1634	chr9	132490574	132491574	+	15.4	1000	Intergenic	MLT1E1|LTR|ERVL-MaLR	-10089	NR_132102	101929437	Hs.112596	NR_132102	ENSG00000236024	PRRX2-AS1	-	PRRX2 antisense RNA 1	ncRNA	15.36	0.49	31.34693878	1.26E-14
chr9-1635	chr9	133012600	133013600	+	14.1	1000	Intergenic	L1MD|LINE|L1	-15058	NM_001291815	256158	Hs.32194	NM_144655	ENSG00000148357	HMCN2	-	hemicentin 2	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr9-1639	chr9	133896244	133897502	+	16.6	1258	"intron (NM_006059, intron 1 of 27)"	"intron (NM_006059, intron 1 of 27)"	12369	NM_006059	10319	Hs.201805	NM_006059	ENSG00000050555	LAMC3	OCCM	laminin subunit gamma 3	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr9-1640	chr9	133905343	133906343	+	15.4	1000	"intron (NM_006059, intron 2 of 27)"	"intron (NM_006059, intron 2 of 27)"	21339	NM_006059	10319	Hs.201805	NM_006059	ENSG00000050555	LAMC3	OCCM	laminin subunit gamma 3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr9-1643	chr9	133994959	133995959	+	12.8	1000	"intron (NM_001185095, intron 6 of 6)"	MIRc|SINE|MIR	-5489	NM_005085	8021	Hs.654530	NM_005085	ENSG00000126883	NUP214	CAIN|CAN	nucleoporin 214	protein-coding	12.8	1.46	8.767123288	3.57E-07
chr9-1647	chr9	135349337	135350337	+	14.1	1000	"intron (NM_001282957, intron 1 of 5)"	"intron (NM_001282957, intron 1 of 5)"	64254	NM_001282957	389799	Hs.201709	NM_207417	ENSG00000188523	CFAP77	C9orf171	cilia and flagella associated protein 77	protein-coding	14.08	0.97	14.51546392	5.60E-10
chr9-1648	chr9	135432415	135433415	+	14.1	1000	"intron (NM_207417, intron 6 of 6)"	"intron (NM_207417, intron 6 of 6)"	-25078	NM_020064	56751	Hs.283809	NM_020064	ENSG00000125492	BARHL1	-	BarH like homeobox 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr9-1649	chr9	135453800	135459506	+	82.6	5706	Intergenic	CpG	-1340	NM_020064	56751	Hs.283809	NM_020064	ENSG00000125492	BARHL1	-	BarH like homeobox 1	protein-coding	82.57	10.68	7.731273408	1.96E-34
chr9-1652	chr9	135853726	135854726	+	14.7	1000	"5' UTR (NM_004188, exon 5 of 11)"	"5' UTR (NM_004188, exon 5 of 11)"	128	NM_001135031	8328	Hs.553160	NM_004188	ENSG00000165702	GFI1B	BDPLT17|ZNF163B	growth factor independent 1B transcriptional repressor	protein-coding	14.72	1.94	7.587628866	6.14E-07
chr9-1653	chr9	136085750	136086750	+	15.4	1000	Intergenic	LTR33|LTR|ERVL	-1613	NR_110243	29989	Hs.449629	NM_014581	ENSG00000171102	OBP2B	LCN14|OBPIIb	odorant binding protein 2B	protein-coding	15.36	0.97	15.83505155	3.54E-11
chr9-1659	chr9	137120034	137121034	+	14.7	1000	Intergenic	Intergenic	-90848	NR_023344	100151684	Hs.545589	NR_023344	ENSG00000221676	RNU6ATAC	RNU6ATAC1|U6ATAC	"RNA, U6atac small nuclear (U12-dependent splicing)"	snRNA	14.72	2.43	6.057613169	5.07E-06
chr9-1660	chr9	137131277	137132921	+	28.2	1644	Intergenic	Intergenic	-86210	NM_002957	6256	Hs.590886	NM_002957	ENSG00000186350	RXRA	NR2B1	retinoid X receptor alpha	protein-coding	28.16	1.94	14.51546392	1.99E-18
chr9-1661	chr9	137151026	137152026	+	14.7	1000	Intergenic	MIRc|SINE|MIR	-66783	NM_002957	6256	Hs.590886	NM_002957	ENSG00000186350	RXRA	NR2B1	retinoid X receptor alpha	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr9-1671	chr9	137517540	137518540	+	14.7	1000	Intergenic	Intergenic	-15611	NM_001278074	1289	Hs.210283	NM_000093	ENSG00000130635	COL5A1	EDSC	collagen type V alpha 1 chain	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr9-1674	chr9	137684908	137685908	+	14.1	1000	"intron (NM_001278074, intron 32 of 65)"	"intron (NM_001278074, intron 32 of 65)"	55807	NR_039691	100616333		NR_039691	ENSG00000264744	MIR3689C	-	microRNA 3689c	ncRNA	14.08	0	14.5040551	3.99E-13
chr9-1677	chr9	137798840	137799840	+	15.4	1000	"3' UTR (NM_002003, exon 9 of 9)"	"3' UTR (NM_002003, exon 9 of 9)"	10509	NM_002003	2219	Hs.440898	NM_002003	ENSG00000085265	FCN1	FCNM	ficolin 1	protein-coding	15.36	0	15.82260557	1.26E-14
chr9-1678	chr9	137823233	137824233	+	15.4	1000	Intergenic	AluJo|SINE|Alu	-13884	NM_002003	2219	Hs.440898	NM_002003	ENSG00000085265	FCN1	FCNM	ficolin 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr9-1679	chr9	137827323	137828323	+	14.1	1000	Intergenic	Intergenic	-17974	NM_002003	2219	Hs.440898	NM_002003	ENSG00000085265	FCN1	FCNM	ficolin 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chr9-168	chr9	98533749	98535268	+	28.2	1519	Intergenic	Intergenic	-103392	NM_001010895	375748	Hs.432364	NM_020207	ENSG00000182150	ERCC6L2	BMFS2|C9orf102|RAD26L|SR278	ERCC excision repair 6 like 2	protein-coding	28.16	3.88	7.257731959	1.97E-12
chr9-1682	chr9	138106536	138108393	+	30.1	1857	Intergenic	MLT1D|LTR|ERVL-MaLR	34009	NR_046107	401557	Hs.640138	NR_046107		LOC401557	-	uncharacterized LOC401557	ncRNA	30.08	2.91	10.33676976	7.13E-16
chr9-1683	chr9	138157759	138158759	+	15.4	1000	Intergenic	Intergenic	-76836	NM_173520	157927	Hs.559511	NM_173520		C9orf62	-	chromosome 9 open reading frame 62	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr9-1686	chr9	138200683	138201683	+	15.4	1000	Intergenic	Intergenic	-33912	NM_173520	157927	Hs.559511	NM_173520		C9orf62	-	chromosome 9 open reading frame 62	protein-coding	15.36	0	15.82260557	1.26E-14
chr9-1688	chr9	138244795	138247426	+	35.8	2631	Intergenic	Intergenic	11015	NM_173520	157927	Hs.559511	NM_173520		C9orf62	-	chromosome 9 open reading frame 62	protein-coding	35.84	2.91	12.3161512	3.62E-21
chr9-169	chr9	116387590	116388840	+	24.3	1250	Intergenic	Intergenic	31781	NM_001276262	5998	Hs.494875	NM_017790	ENSG00000138835	RGS3	C2PA|RGP3	regulator of G-protein signaling 3	protein-coding	24.32	2.91	8.357388316	5.77E-12
chr9-1690	chr9	138448505	138449505	+	15.4	1000	Intergenic	L1MD2|LINE|L1	-4597	NM_001018049	5047	Hs.532325	NM_002571	ENSG00000122133	PAEP	GD|GdA|GdF|GdS|PAEG|PEP|PP14	progestagen associated endometrial protein	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr9-1691	chr9	138474117	138475117	+	15.4	1000	"intron (NR_034017, intron 3 of 4)"	MER1A|DNA|hAT-Charlie	7846	NR_034016	100130954	Hs.550769	NR_034016	ENSG00000237339	LINC01502	-	long intergenic non-protein coding RNA 1502	ncRNA	15.36	0	15.82260557	1.26E-14
chr9-1694	chr9	138582263	138583263	+	14.7	1000	Intergenic	Intergenic	8611	NM_001012415	402381	Hs.120464	NM_001012415	ENSG00000165643	SOHLH1	C9orf157|NOHLH|SPATA27|TEB2|bA100C15.3|bHLHe80	spermatogenesis and oogenesis specific basic helix-loop-helix 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr9-1695	chr9	138607277	138608277	+	14.7	1000	"intron (NM_020822, intron 2 of 30)"	"intron (NM_020822, intron 2 of 30)"	13746	NM_001272003	57582	Hs.104950	NM_020822	ENSG00000107147	KCNT1	EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2	potassium sodium-activated channel subfamily T member 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr9-1700	chr9	138963492	138964492	+	14.7	1000	"intron (NM_144653, intron 1 of 5)"	AluSq2|SINE|Alu	23139	NM_144653	138151	Hs.112895	NM_144653	ENSG00000148411	NACC2	BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB	NACC family member 2	protein-coding	14.72	0	15.16333034	3.99E-13
chr9-1701	chr9	139016743	139017743	+	15.4	1000	Intergenic	(TTGG)n|Simple_repeat|Simple_repeat	-6512	NM_152833	90120	Hs.287411	NM_152833	ENSG00000238227	C9orf69	-	chromosome 9 open reading frame 69	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-1702	chr9	139019431	139021735	+	44.8	2304	Intergenic	Intergenic	-9852	NM_152833	90120	Hs.287411	NM_152833	ENSG00000238227	C9orf69	-	chromosome 9 open reading frame 69	protein-coding	44.81	2.91	15.39862543	3.31E-29
chr9-1704	chr9	139238948	139239948	+	14.1	1000	"intron (NM_001145638, intron 9 of 13)"	"intron (NM_001145638, intron 9 of 13)"	-8061	NM_001145639	26086	Hs.239370	NM_015597	ENSG00000160360	GPSM1	AGS3	G-protein signaling modulator 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr9-1706	chr9	139517595	139519135	+	25	1540	Intergenic	Intergenic	-6732	NR_135288	401561	Hs.609301	NR_135288	ENSG00000279141	LINC01451	HCCAT4	long intergenic non-protein coding RNA 1451	ncRNA	24.96	5.82	4.288659794	3.56E-07
chr9-1707	chr9	139539362	139544488	+	65.9	5126	Intergenic	Intergenic	-11383	NR_046367	51162	Hs.91481	NM_016215	ENSG00000172889	EGFL7	NEU1|VE-STATIN|ZNEU1	EGF like domain multiple 7	protein-coding	65.93	15.53	4.245331616	8.65E-17
chr9-1711	chr9	140058929	140059929	+	13.4	1000	"intron (NM_000832, intron 18 of 18)"	"intron (NM_000832, intron 18 of 18)"	4293	NR_037416	100500811		NR_037416	ENSG00000263697	MIR3621	-	microRNA 3621	ncRNA	13.44	0	13.84477987	1.16E-11
chr9-1714	chr9	140810803	140811803	+	16	1000	"intron (NM_000718, intron 5 of 45)"	"intron (NM_000718, intron 5 of 45)"	-24281	NR_121583	100133077	Hs.640081	NR_121583	ENSG00000203987	LOC100133077	-	uncharacterized LOC100133077	ncRNA	16	2.91	5.498281787	4.98E-06
chr9-1717	chr9	140991841	140992841	+	15.4	1000	"intron (NM_000718, intron 36 of 45)"	"intron (NM_000718, intron 36 of 45)"	-52224	NR_027156	643224	Hs.551805	NR_027156		TUBBP5	-	tubulin beta pseudogene 5	pseudo	15.36	0	15.82260557	1.26E-14
chr9-181	chr9	132329931	132331537	+	25.6	1606	Intergenic	MIRb|SINE|MIR	-40429	NM_001286796	28989	Hs.744027	NM_014064	ENSG00000148335	NTMT1	AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A	N-terminal Xaa-Pro-Lys N-methyltransferase 1	protein-coding	25.6	2.91	8.797250859	6.53E-13
chr9-183	chr9	132435267	132441879	+	100.5	6612	"intron (NM_016307, intron 1 of 3)"	MIRb|SINE|MIR	10653	NM_016307	51450	Hs.660115	NM_016307	ENSG00000167157	PRRX2	PMX2|PRX2	paired related homeobox 2	protein-coding	100.49	14.08	7.137073864	2.82E-39
chr9-187	chr9	138556792	138558468	+	35.2	1676	"intron (NM_001001676, intron 5 of 5)"	"intron (NM_001001676, intron 5 of 5)"	2462	NM_001001676	392399	Hs.532679	NM_001001676	ENSG00000148386	LCN9	HEL129	lipocalin 9	protein-coding	35.2	2.91	12.09621993	4.47E-20
chr9-191	chr9	34707492	34710130	+	48.6	2638	TTS (NM_002989)	TTS (NM_002989)	1353	NM_002989	6366	Hs.57907	NM_002989	ENSG00000137077	CCL21	6Ckine|CKb9|ECL|SCYA21|SLC|TCA4	C-C motif chemokine ligand 21	protein-coding	48.65	8.25	5.896969697	2.05E-17
chr9-198	chr9	93276649	93278190	+	30.1	1541	"intron (NR_034157, intron 1 of 5)"	MLT1A0|LTR|ERVL-MaLR	67609	NR_034157	340515	Hs.522284	NM_001105317		LINC01501	-	long intergenic non-protein coding RNA 1501	ncRNA	30.08	6.31	4.76703645	3.01E-09
chr9-201	chr9	100262560	100266984	+	76.2	4424	"intron (NM_003275, intron 1 of 9)"	CpG	851	NM_003275	7111	Hs.404289	NM_003275	ENSG00000136842	TMOD1	D9S57E|ETMOD|TMOD	tropomodulin 1	protein-coding	76.17	8.74	8.715102975	1.44E-34
chr9-202	chr9	101359554	101360804	+	21.8	1250	"intron (NM_005458, intron 1 of 18)"	AluSx|SINE|Alu	111300	NM_005458	9568	Hs.198612	NM_005458	ENSG00000136928	GABBR2	GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099	gamma-aminobutyric acid type B receptor subunit 2	protein-coding	21.76	3.4	6.4	3.73E-09
chr9-206	chr9	112260949	112261949	+	23.7	1000	promoter-TSS (NM_002829)	promoter-TSS (NM_002829)	-856	NM_001145368	5774	Hs.436429	NM_002829	ENSG00000070159	PTPN3	PTP-H1|PTPH1	"protein tyrosine phosphatase, non-receptor type 3"	protein-coding	23.68	0	24.39318358	2.80E-24
chr9-207	chr9	116384031	116385455	+	24.3	1424	Intergenic	Tigger15a|DNA|TcMar-Tigger	28309	NM_001276262	5998	Hs.494875	NM_017790	ENSG00000138835	RGS3	C2PA|RGP3	regulator of G-protein signaling 3	protein-coding	24.32	2.43	10.00823045	2.59E-13
chr9-213	chr9	132310810	132314445	+	62.7	3635	Intergenic	CpG	-58536	NM_001286796	28989	Hs.744027	NM_014064	ENSG00000148335	NTMT1	AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A	N-terminal Xaa-Pro-Lys N-methyltransferase 1	protein-coding	62.73	10.68	5.873595506	6.50E-22
chr9-219	chr9	138136430	138138724	+	40.3	2294	Intergenic	MLT1C|LTR|ERVL-MaLR	64122	NR_046107	401557	Hs.640138	NR_046107		LOC401557	-	uncharacterized LOC401557	ncRNA	40.33	3.88	10.3943299	5.62E-21
chr9-221	chr9	113094	114094	+	18.6	1000	Intergenic	CpG	4823	NM_207305	2298	Hs.584759	NM_207305	ENSG00000170122	FOXD4	FKHL9|FOXD4A|FREAC-5|FREAC5	forkhead box D4	protein-coding	18.56	0.97	19.13402062	1.12E-13
chr9-228	chr9	38234798	38235798	+	19.2	1000	Intergenic	MLT1N2|LTR|ERVL-MaLR	-157363	NM_000692	219	Hs.436219	NM_000692	ENSG00000137124	ALDH1B1	ALDH5|ALDHX	aldehyde dehydrogenase 1 family member B1	protein-coding	19.2	1.94	9.896907216	9.57E-11
chr9-234	chr9	89766294	89767294	+	20.5	1000	"intron (NM_001001709, intron 1 of 1)"	"intron (NM_001001709, intron 1 of 1)"	3235	NM_001001709	401535	Hs.657740	NM_001001709		C9orf170	-	chromosome 9 open reading frame 170	protein-coding	20.48	2.91	7.037800687	2.92E-09
chr9-236	chr9	91441473	91442794	+	21.8	1321	Intergenic	Intergenic	-81313	NR_036252	100423015		NR_036252	ENSG00000265873	MIR4289	-	microRNA 4289	ncRNA	21.76	3.88	5.608247423	2.53E-08
chr9-237	chr9	93140296	93141838	+	25.6	1542	"intron (NR_109795, intron 2 of 2)"	"intron (NR_109795, intron 2 of 2)"	54704	NR_109795	101927873	Hs.598482	NR_109795	ENSG00000231107	LINC01508	-	long intergenic non-protein coding RNA 1508	ncRNA	25.6	2.91	8.797250859	6.53E-13
chr9-239	chr9	97365910	97372329	+	103.1	6419	"exon (NM_000507, exon 5 of 7)"	"exon (NM_000507, exon 5 of 7)"	-13005	NM_003837	8789	Hs.61255	NM_003837	ENSG00000130957	FBP2	-	fructose-bisphosphatase 2	protein-coding	103.05	13.59	7.582781457	4.72E-42
chr9-248	chr9	125108082	125109739	+	32	1657	Intergenic	AluJr|SINE|Alu	-23899	NM_001271368	5742	Hs.201978	NM_000962	ENSG00000095303	PTGS1	COX1|COX3|PCOX1|PES-1|PGG/HS|PGHS-1|PGHS1|PHS1|PTGHS	prostaglandin-endoperoxide synthase 1	protein-coding	32	5.34	5.992509363	3.79E-12
chr9-249	chr9	126794192	126795192	+	19.8	1000	"intron (NM_004789, intron 4 of 4)"	"intron (NM_004789, intron 4 of 4)"	20803	NM_004789	9355	Hs.696425	NM_004789	ENSG00000106689	LHX2	LH2|hLhx2	LIM homeobox 2	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr9-251	chr9	129379212	129392241	+	193.9	13029	"intron (NM_001174147, intron 2 of 7)"	"intron (NM_001174147, intron 2 of 7)"	9004	NM_002316	4010	Hs.129133	NM_002316	ENSG00000136944	LMX1B	LMX1.2|NPS1	LIM homeobox transcription factor 1 beta	protein-coding	193.94	42.71	4.540856942	5.01E-50
chr9-260	chr9	135004533	135005533	+	20.5	1000	Intergenic	Intergenic	-32301	NM_032536	84628	Hs.163642	NM_032536	ENSG00000196358	NTNG2	LHLL9381|Lmnt2|NTNG1|bA479K20.1	netrin G2	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr9-270	chr9	37026137	37027392	+	21.8	1255	"intron (NM_001280547, intron 1 of 8)"	CpG	7712	NM_001280549	5079	Hs.654464	NM_016734	ENSG00000196092	PAX5	ALL3|BSAP	paired box 5	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr9-280	chr9	96719618	96721416	+	28.8	1798	TTS (NR_144455)	TTS (NR_144455)	2401	NR_144455	101928040	Hs.375820	NR_144455		BARX1-AS1	-	BARX1 antisense RNA 1 (head to head)	ncRNA	28.8	1.94	14.84536082	1.99E-18
chr9-284	chr9	98934785	98935785	+	19.2	1000	Intergenic	Intergenic	-56592	NR_132344	158434	Hs.381771	NM_001256408	ENSG00000275465	LOC158434	-	uncharacterized LOC158434	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr9-288	chr9	107560109	107561109	+	19.8	1000	"intron (NM_005502, intron 37 of 49)"	"intron (NM_005502, intron 37 of 49)"	34587	NR_130760	55335	Hs.429294	NM_018376	ENSG00000165028	NIPSNAP3B	FP944|NIPSNAP3|SNAP1	nipsnap homolog 3B	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr9-291	chr9	116845773	116848704	+	44.8	2931	Intergenic	Intergenic	-6486	NM_001633	259	Hs.436911	NM_001633	ENSG00000106927	AMBP	A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI	alpha-1-microglobulin/bikunin precursor	protein-coding	44.81	7.77	5.767052767	6.82E-16
chr9-292	chr9	116923472	116926609	+	46.1	3137	"exon (NM_032888, exon 2 of 61)"	"exon (NM_032888, exon 2 of 61)"	7215	NM_032888	85301	Hs.494892	NM_032161	ENSG00000196739	COL27A1	STLS	collagen type XXVII alpha 1 chain	protein-coding	46.09	7.77	5.931788932	1.14E-16
chr9-301	chr9	132197804	132200741	+	77.4	2937	Intergenic	(CGTG)n|Simple_repeat|Simple_repeat	-51667	NR_038955	100506190	Hs.529860	NR_038955		LINC00963	-	long intergenic non-protein coding RNA 963	ncRNA	77.45	8.74	8.861556064	1.63E-35
chr9-302	chr9	132358054	132361020	+	50.6	2966	Intergenic	Intergenic	-11626	NM_001286796	28989	Hs.744027	NM_014064	ENSG00000148335	NTMT1	AD-003|C9orf32|HOMT1A|METTL11A|NRMT|NRMT1|NTM1A	N-terminal Xaa-Pro-Lys N-methyltransferase 1	protein-coding	50.57	2.43	20.81069959	5.27E-37
chr9-306	chr9	135378123	135382722	+	71	4599	"intron (NM_207417, intron 4 of 6)"	"intron (NM_207417, intron 4 of 6)"	-77571	NM_020064	56751	Hs.283809	NM_020064	ENSG00000125492	BARHL1	-	BarH like homeobox 1	protein-coding	71.05	12.62	5.629952456	2.28E-23
chr9-309	chr9	136993914	136995200	+	21.8	1286	Intergenic	Intergenic	-6653	NM_017588	11091	Hs.397638	NM_017588	ENSG00000196363	WDR5	BIG-3|CFAP89|SWD3	WD repeat domain 5	protein-coding	21.76	2.43	8.95473251	2.49E-11
chr9-312	chr9	137442440	137444553	+	34.6	2113	Intergenic	Intergenic	-90155	NM_001278074	1289	Hs.210283	NM_000093	ENSG00000130635	COL5A1	EDSC	collagen type V alpha 1 chain	protein-coding	34.56	6.31	5.477020602	4.08E-12
chr9-313	chr9	137676267	137679053	+	41.6	2786	"intron (NM_001278074, intron 30 of 65)"	"intron (NM_001278074, intron 30 of 65)"	63555	NR_039691	100616333		NR_039691	ENSG00000264744	MIR3689C	-	microRNA 3689c	ncRNA	41.61	6.8	6.119117647	3.54E-15
chr9-314	chr9	137961791	137962791	+	19.8	1000	Intergenic	Intergenic	-4798	NM_014279	10439	Hs.522484	NM_006334	ENSG00000130558	OLFM1	AMY|NOE1|NOELIN1|OlfA	olfactomedin 1	protein-coding	19.84	3.4	5.835294118	1.47E-07
chr9-315	chr9	138632319	138634608	+	37.8	2289	"intron (NM_020822, intron 2 of 30)"	"intron (NM_020822, intron 2 of 30)"	39432	NM_001272003	57582	Hs.104950	NM_020822	ENSG00000107147	KCNT1	EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2	potassium sodium-activated channel subfamily T member 1	protein-coding	37.76	6.8	5.552941176	7.17E-13
chr9-319	chr9	33642785	33644042	+	21.8	1257	Intergenic	L1PA10|LINE|L1	19190	NR_003573	304	Hs.534301	NR_003573		ANXA2P2	ANX2L2|ANX2P2|LPC2B	annexin A2 pseudogene 2	pseudo	21.76	3.88	5.608247423	2.53E-08
chr9-321	chr9	34567153	34568153	+	19.2	1000	promoter-TSS (NR_024369)	promoter-TSS (NR_024369)	-357	NR_024369	415056	Hs.734229	NR_024369		CNTFR-AS1	-	CNTFR antisense RNA 1	ncRNA	19.2	2.91	6.597938144	2.07E-08
chr9-325	chr9	35452950	35453950	+	18.6	1000	"intron (NR_003581, intron 11 of 17)"	L1M1|LINE|L1	-36380	NM_014806	9853	Hs.493796	NM_014806	ENSG00000198853	RUSC2	Iporin	RUN and SH3 domain containing 2	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr9-327	chr9	35970819	35975977	+	82.6	5158	Intergenic	L1M2|LINE|L1	-15247	NM_019897	56656	Hs.553540	NM_019897	ENSG00000278889	OR2S2	OR37A|OST715	olfactory receptor family 2 subfamily S member 2 (gene/pseudogene)	protein-coding	82.57	14.08	5.864346591	6.91E-28
chr9-333	chr9	79697778	79699100	+	22.4	1322	Intergenic	Intergenic	63868	NM_001013735	442425	Hs.553843	NM_001013735	ENSG00000204612	FOXB2	bA159H20.4	forkhead box B2	protein-coding	22.4	1.94	11.54639175	8.00E-13
chr9-334	chr9	79733591	79734857	+	18.6	1266	Intergenic	Intergenic	-58137	NM_001018038	23230	Hs.459790	NM_015186	ENSG00000197969	VPS13A	CHAC|CHOREIN	vacuolar protein sorting 13 homolog A	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr9-345	chr9	94710877	94714063	+	51.8	3186	promoter-TSS (NM_001318204)	promoter-TSS (NM_001318204)	-26	NM_001318204	4920	Hs.98255	NM_004560	ENSG00000169071	ROR2	BDB|BDB1|NTRKR2	receptor tyrosine kinase like orphan receptor 2	protein-coding	51.85	8.25	6.284848485	5.42E-19
chr9-350	chr9	99326986	99327986	+	17.3	1000	"intron (NM_001077181, intron 2 of 13)"	"intron (NM_001077181, intron 2 of 13)"	1717	NM_001077181	8555	Hs.40582	NM_003671	ENSG00000081377	CDC14B	CDC14B3|Cdc14B1|Cdc14B2|hCDC14B	cell division cycle 14B	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr9-354	chr9	101047465	101048992	+	25.6	1527	Intergenic	Intergenic	-30225	NM_018421	55357	Hs.371016	NM_018421	ENSG00000095383	TBC1D2	PARIS-1|PARIS1|TBC1D2A	TBC1 domain family member 2	protein-coding	25.6	4.37	5.85812357	7.40E-10
chr9-356	chr9	101214236	101215236	+	19.2	1000	"intron (NM_005458, intron 7 of 18)"	MIR|SINE|MIR	-196733	NM_018421	55357	Hs.371016	NM_018421	ENSG00000095383	TBC1D2	PARIS-1|PARIS1|TBC1D2A	TBC1 domain family member 2	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr9-357	chr9	101436845	101438097	+	21.8	1252	"intron (NM_005458, intron 1 of 18)"	"intron (NM_005458, intron 1 of 18)"	34008	NM_005458	9568	Hs.198612	NM_005458	ENSG00000136928	GABBR2	GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099	gamma-aminobutyric acid type B receptor subunit 2	protein-coding	21.76	4.37	4.979405034	1.32E-07
chr9-358	chr9	101642455	101643708	+	19.8	1253	Intergenic	L1PA15|LINE|L1	-62914	NM_001855	1306	Hs.409034	NM_001855	ENSG00000204291	COL15A1	-	collagen type XV alpha 1 chain	protein-coding	19.84	4.85	4.090721649	1.08E-05
chr9-36	chr9	130895147	130896491	+	42.2	1344	Intergenic	L1MB3|LINE|L1	5011	NR_024425	389791	Hs.632678	NM_001013652	ENSG00000232850	PTGES2-AS1	-	PTGES2 antisense RNA 1 (head to head)	ncRNA	42.25	6.8	6.213235294	5.66E-16
chr9-362	chr9	116262970	116264360	+	21.1	1390	promoter-TSS (NM_001322214)	promoter-TSS (NM_001322214)	-42	NM_001322214	5998	Hs.494875	NM_017790	ENSG00000138835	RGS3	C2PA|RGP3	regulator of G-protein signaling 3	protein-coding	21.12	2.91	7.257731959	2.92E-09
chr9-363	chr9	116995295	116997123	+	32	1828	"intron (NM_032888, intron 16 of 60)"	"intron (NM_032888, intron 16 of 60)"	24495	NR_030255	619556		NR_030255	ENSG00000207726	MIR455	MIRN455|hsa-mir-455|mir-455	microRNA 455	ncRNA	32	5.34	5.992509363	3.79E-12
chr9-367	chr9	124474391	124476332	+	33.3	1941	"intron (NM_032552, intron 3 of 16)"	MIRc|SINE|MIR	-29703	NM_138709	153090	Hs.522378	NM_032552	ENSG00000136848	DAB2IP	AF9Q34|AIP-1|AIP1|DIP1/2	DAB2 interacting protein	protein-coding	33.28	4.37	7.615560641	6.77E-15
chr9-37	chr9	95941161	95943000	+	44.2	1839	Intergenic	AluSx|SINE|Alu	-5132	NM_006648	65268	Hs.654856	NM_006648	ENSG00000165238	WNK2	NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43	WNK lysine deficient protein kinase 2	protein-coding	44.17	4.37	10.10755149	1.65E-22
chr9-371	chr9	128991294	128992294	+	18.6	1000	Intergenic	Intergenic	46400	NR_121584	101929116	Hs.382124	NR_121584	ENSG00000228392	LOC101929116	-	uncharacterized LOC101929116	ncRNA	18.56	2.91	6.378006873	1.38E-07
chr9-372	chr9	129042118	129043118	+	19.2	1000	Intergenic	Intergenic	-4424	NR_121584	101929116	Hs.382124	NR_121584	ENSG00000228392	LOC101929116	-	uncharacterized LOC101929116	ncRNA	19.2	4.37	4.393592677	3.16E-06
chr9-38	chr9	126762608	126764128	+	31.4	1520	Intergenic	Intergenic	8307	NR_135129	100505588	Hs.547168	NR_135129	ENSG00000236668	LOC100505588	-	uncharacterized LOC100505588	ncRNA	31.36	3.88	8.082474227	3.25E-14
chr9-384	chr9	132049749	132050749	+	19.2	1000	Intergenic	Intergenic	5554	NR_121587	101929331	Hs.522428	NR_121587	ENSG00000224307	LOC101929331	-	uncharacterized LOC101929331	ncRNA	19.2	1.94	9.896907216	9.57E-11
chr9-389	chr9	133249650	133250650	+	19.2	1000	"intron (NM_001291815, intron 38 of 86)"	"intron (NM_001291815, intron 38 of 86)"	-69944	NM_054012	445	Hs.160786	NM_000050	ENSG00000130707	ASS1	ASS|CTLN1	argininosuccinate synthase 1	protein-coding	19.2	2.91	6.597938144	2.07E-08
chr9-393	chr9	137184779	137187115	+	44.2	2336	Intergenic	Intergenic	-32362	NM_002957	6256	Hs.590886	NM_002957	ENSG00000186350	RXRA	NR2B1	retinoid X receptor alpha	protein-coding	44.17	6.8	6.495588235	8.79E-17
chr9-394	chr9	137481615	137485034	+	43.5	3419	Intergenic	MER74B|LTR|ERVL	-50327	NM_001278074	1289	Hs.210283	NM_000093	ENSG00000130635	COL5A1	EDSC	collagen type V alpha 1 chain	protein-coding	43.53	6.8	6.401470588	8.79E-17
chr9-395	chr9	137727792	137729340	+	23.7	1548	"intron (NM_001278074, intron 65 of 65)"	"intron (NM_001278074, intron 65 of 65)"	12649	NR_039691	100616333		NR_039691	ENSG00000264744	MIR3689C	-	microRNA 3689c	ncRNA	23.68	2.91	8.137457045	4.85E-11
chr9-399	chr9	138425158	138426802	+	29.4	1644	Intergenic	LTR41|LTR|ERVL	-12005	NM_014582	29991	Hs.567489	NM_014582	ENSG00000122136	OBP2A	LCN13|OBP|OBP2C|OBPIIa|hOBPIIa	odorant binding protein 2A	protein-coding	29.44	2.91	10.11683849	7.13E-16
chr9-401	chr9	138645530	138646878	+	21.8	1348	"intron (NM_020822, intron 5 of 30)"	"intron (NM_020822, intron 5 of 30)"	52173	NM_001272003	57582	Hs.104950	NM_020822	ENSG00000107147	KCNT1	EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2	potassium sodium-activated channel subfamily T member 1	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr9-403	chr9	138877502	138878761	+	19.2	1259	Intergenic	Intergenic	-24905	NM_016172	10422	Hs.9194	NM_016172	ENSG00000130560	UBAC1	GBDR1|KPC2|UBADC1	UBA domain containing 1	protein-coding	19.2	0	19.77825696	2.52E-19
chr9-404	chr9	138951421	138953516	+	33.9	2095	"intron (NM_144653, intron 1 of 5)"	"intron (NM_144653, intron 1 of 5)"	34663	NM_144653	138151	Hs.112895	NM_144653	ENSG00000148411	NACC2	BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB	NACC family member 2	protein-coding	33.92	4.37	7.76201373	6.77E-15
chr9-405	chr9	139038165	139041258	+	43.5	3093	Intergenic	Intergenic	-28980	NM_152833	90120	Hs.287411	NM_152833	ENSG00000238227	C9orf69	-	chromosome 9 open reading frame 69	protein-coding	43.53	5.82	7.479381443	9.68E-19
chr9-409	chr9	139671962	139672962	+	18.6	1000	Intergenic	D20S16|Satellite|Satellite	-13315	NM_032928	85014	Hs.356744	NM_032928	ENSG00000244187	TMEM141	-	transmembrane protein 141	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr9-413	chr9	34582645	34585347	+	42.9	2702	TTS (NR_024369)	TTS (NR_024369)	5739	NM_001842	1271	Hs.129966	NM_001842	ENSG00000122756	CNTFR	-	ciliary neurotrophic factor receptor	protein-coding	42.89	7.77	5.51994852	2.23E-14
chr9-416	chr9	38410560	38411560	+	17.9	1000	"intron (NM_001007563, intron 4 of 4)"	"intron (NM_001007563, intron 4 of 4)"	13384	NM_001007563	347252	Hs.349705	NM_001007563	ENSG00000137142	IGFBPL1	IGFBP-RP4|IGFBPRP4|bA113O24.1	insulin like growth factor binding protein like 1	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr9-419	chr9	88127772	88128772	+	18.6	1000	Intergenic	Intergenic	228672	NM_001286715	23287	Hs.719980	NM_015239	ENSG00000135049	AGTPBP1	CCP1|NNA1	ATP/GTP binding protein 1	protein-coding	18.56	3.4	5.458823529	8.42E-07
chr9-422	chr9	92219672	92221557	+	38.4	1885	"exon (NM_006705, exon 3 of 4)"	"exon (NM_006705, exon 3 of 4)"	687	NM_006705	10912	Hs.9701	NM_006705	ENSG00000130222	GADD45G	CR6|DDIT2|GADD45gamma|GRP17	growth arrest and DNA damage inducible gamma	protein-coding	38.4	4.85	7.917525773	2.24E-17
chr9-424	chr9	92746164	92747496	+	21.1	1332	"intron (NR_109791, intron 2 of 2)"	"intron (NR_109791, intron 2 of 2)"	15132	NR_109791	101927847	Hs.584312	NR_109791		LOC101927847	-	uncharacterized LOC101927847	ncRNA	21.12	3.88	5.443298969	1.44E-07
chr9-425	chr9	92848133	92852644	+	64	4511	Intergenic	AluSc8|SINE|Alu	-46607	NR_038882	286370	Hs.407589	NR_038882	ENSG00000227555	MIR4290HG	-	MIR4290 host gene	ncRNA	64.01	7.77	8.238095238	1.21E-28
chr9-429	chr9	94647655	94648655	+	18.6	1000	"intron (NM_004560, intron 1 of 8)"	AluSq2|SINE|Alu	64289	NM_004560	4920	Hs.98255	NM_004560	ENSG00000169071	ROR2	BDB|BDB1|NTRKR2	receptor tyrosine kinase like orphan receptor 2	protein-coding	18.56	0.49	37.87755102	9.96E-18
chr9-430	chr9	95958064	95959064	+	17.9	1000	"intron (NM_001282394, intron 1 of 29)"	"intron (NM_001282394, intron 1 of 29)"	11352	NM_001282394	65268	Hs.654856	NM_006648	ENSG00000165238	WNK2	NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43	WNK lysine deficient protein kinase 2	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr9-432	chr9	96071630	96072926	+	21.1	1296	"intron (NM_001282394, intron 28 of 29)"	"intron (NM_001282394, intron 28 of 29)"	36418	NM_001098808	445577	Hs.575636	NM_001098808	ENSG00000204352	C9orf129	bA165J3.3	chromosome 9 open reading frame 129	protein-coding	21.12	3.88	5.443298969	1.44E-07
chr9-433	chr9	96571334	96572589	+	21.8	1255	Intergenic	Intergenic	-9678	NR_036254	100422927		NR_036254	ENSG00000265347	MIR4291	-	microRNA 4291	ncRNA	21.76	3.88	5.608247423	2.53E-08
chr9-435	chr9	96693105	96694105	+	17.9	1000	Intergenic	MLT1H|LTR|ERVL-MaLR	24003	NM_021570	56033	Hs.164960	NM_021570	ENSG00000131668	BARX1	-	BARX homeobox 1	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr9-436	chr9	97355998	97356998	+	17.3	1000	promoter-TSS (NM_003837)	promoter-TSS (NM_003837)	-384	NM_003837	8789	Hs.61255	NM_003837	ENSG00000130957	FBP2	-	fructose-bisphosphatase 2	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr9-437	chr9	98341243	98342243	+	16	1000	Intergenic	MLT2B2|LTR|ERVL	-62496	NM_001083603	5727	Hs.494538	NM_000264	ENSG00000185920	PTCH1	BCNS|HPE7|NBCCS|PTC|PTC1|PTCH|PTCH11	patched 1	protein-coding	16	1.94	8.24742268	7.67E-08
chr9-438	chr9	98494186	98495725	+	25	1539	Intergenic	Intergenic	-142945	NM_001010895	375748	Hs.432364	NM_020207	ENSG00000182150	ERCC6L2	BMFS2|C9orf102|RAD26L|SR278	ERCC excision repair 6 like 2	protein-coding	24.96	5.34	4.674157303	9.72E-08
chr9-441	chr9	100288227	100290026	+	28.8	1799	"intron (NM_003275, intron 2 of 9)"	"intron (NM_003275, intron 2 of 9)"	25205	NM_003275	7111	Hs.404289	NM_003275	ENSG00000136842	TMOD1	D9S57E|ETMOD|TMOD	tropomodulin 1	protein-coding	28.8	1.94	14.84536082	1.99E-18
chr9-443	chr9	101689810	101691386	+	25.6	1576	Intergenic	Intergenic	-15397	NM_001855	1306	Hs.409034	NM_001855	ENSG00000204291	COL15A1	-	collagen type XV alpha 1 chain	protein-coding	25.6	6.31	4.057052298	2.77E-07
chr9-444	chr9	102130821	102131821	+	17.9	1000	"intron (NR_102271, intron 3 of 5)"	"intron (NR_102271, intron 3 of 5)"	6218	NR_102270	100996569	Hs.745280	NR_102270	ENSG00000271086	NAMA	-	"non-protein coding RNA, associated with MAP kinase pathway and growth arrest"	ncRNA	17.92	1.46	12.2739726	2.41E-11
chr9-445	chr9	102584943	102587392	+	41	2449	"intron (NM_173199, intron 1 of 4)"	CpG-26842	2030	NM_173200	8013	Hs.279522	NM_006981	ENSG00000119508	NR4A3	CHN|CSMF|MINOR|NOR1|TEC	nuclear receptor subfamily 4 group A member 3	protein-coding	40.97	6.8	6.025	3.54E-15
chr9-452	chr9	124304444	124305444	+	17.9	1000	Intergenic	AluSx3|SINE|Alu	-24437	NM_032552	153090	Hs.522378	NM_032552	ENSG00000136848	DAB2IP	AF9Q34|AIP-1|AIP1|DIP1/2	DAB2 interacting protein	protein-coding	17.92	4.37	4.100686499	1.41E-05
chr9-462	chr9	129445502	129447130	+	28.2	1628	"intron (NM_001174147, intron 2 of 7)"	"intron (NM_001174147, intron 2 of 7)"	69594	NM_002316	4010	Hs.129133	NM_002316	ENSG00000136944	LMX1B	LMX1.2|NPS1	LIM homeobox transcription factor 1 beta	protein-coding	28.16	1.94	14.51546392	1.99E-18
chr9-468	chr9	132257146	132259473	+	42.2	2327	"intron (NR_038955, intron 2 of 4)"	CpG	7370	NR_038955	100506190	Hs.529860	NR_038955		LINC00963	-	long intergenic non-protein coding RNA 963	ncRNA	42.25	5.82	7.259450172	7.27E-18
chr9-472	chr9	133797826	133799204	+	21.8	1378	"intron (NM_001145106, intron 5 of 7)"	"intron (NM_001145106, intron 5 of 7)"	15724	NM_032843	84929	Hs.133205	NM_032843	ENSG00000130720	FIBCD1	-	fibrinogen C domain containing 1	protein-coding	21.76	0.97	22.43298969	1.19E-17
chr9-476	chr9	135425439	135426439	+	17.9	1000	"intron (NM_207417, intron 6 of 6)"	AluJb|SINE|Alu	-32054	NM_020064	56751	Hs.283809	NM_020064	ENSG00000125492	BARHL1	-	BarH like homeobox 1	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr9-478	chr9	137156399	137157399	+	16.6	1000	Intergenic	Intergenic	-61410	NM_002957	6256	Hs.590886	NM_002957	ENSG00000186350	RXRA	NR2B1	retinoid X receptor alpha	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr9-484	chr9	138187790	138189559	+	26.9	1769	Intergenic	MER34A|LTR|ERV1	-46421	NM_173520	157927	Hs.559511	NM_173520		C9orf62	-	chromosome 9 open reading frame 62	protein-coding	26.88	2.43	11.0617284	2.19E-15
chr9-485	chr9	138267307	138268557	+	20.5	1250	Intergenic	Intergenic	32837	NM_173520	157927	Hs.559511	NM_173520		C9orf62	-	chromosome 9 open reading frame 62	protein-coding	20.48	4.85	4.222680412	2.52E-06
chr9-492	chr9	140966064	140968032	+	33.3	1968	"intron (NM_000718, intron 31 of 45)"	"intron (NM_000718, intron 31 of 45)"	-27525	NR_121582	101928786	Hs.678847	NR_121582		LOC101928786	-	uncharacterized LOC101928786	ncRNA	33.28	4.85	6.86185567	7.28E-14
chr9-498	chr9	35301036	35302036	+	16.6	1000	"intron (NM_001330653, intron 8 of 39)"	"intron (NM_001330653, intron 8 of 39)"	-105216	NR_003582	158381	Hs.575661	NR_003581	ENSG00000179766	ATP8B5P	FetA	"ATPase phospholipid transporting 8B5, pseudogene"	pseudo	16.64	1.94	8.577319588	8.87E-09
chr9-499	chr9	35330281	35331281	+	17.9	1000	"intron (NM_001330653, intron 10 of 39)"	"intron (NM_001330653, intron 10 of 39)"	-75971	NR_003582	158381	Hs.575661	NR_003581	ENSG00000179766	ATP8B5P	FetA	"ATPase phospholipid transporting 8B5, pseudogene"	pseudo	17.92	3.88	4.618556701	3.85E-06
chr9-500	chr9	35905984	35906984	+	16	1000	"exon (NM_001039792, exon 1 of 1)"	"exon (NM_001039792, exon 1 of 1)"	295	NM_001039792	646962	Hs.208081	NM_001039792	ENSG00000196196	HRCT1	LGLL338|PRO537|UNQ338	histidine rich carboxyl terminus 1	protein-coding	16	0.97	16.49484536	3.54E-11
chr9-504	chr9	36768235	36771000	+	36.5	2765	Intergenic	MIR|SINE|MIR	53979	NR_039686	100616289		NR_039686	ENSG00000266255	MIR4475	-	microRNA 4475	ncRNA	36.48	6.8	5.364705882	3.95E-12
chr9-508	chr9	37614679	37615679	+	17.9	1000	Intergenic	AluJb|SINE|Alu	-22543	NM_001134484	401505	Hs.130774	NM_001001790	ENSG00000175768	TOMM5	C9orf105|Tom5|bA613M10.3	translocase of outer mitochondrial membrane 5	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr9-509	chr9	38212845	38213845	+	17.3	1000	Intergenic	Intergenic	-144135	NM_003028	6461	Hs.521482	NM_003028	ENSG00000107338	SHB	bA3J10.2	SH2 domain containing adaptor protein B	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr9-512	chr9	71032615	71033615	+	16.6	1000	"intron (NM_021965, intron 6 of 10)"	"intron (NM_021965, intron 6 of 10)"	-60333	NR_015423	572558	Hs.552819	NR_015423	ENSG00000224958	PGM5-AS1	FAM233A	PGM5 antisense RNA 1	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr9-514	chr9	74061747	74062747	+	17.9	1000	Intergenic	Intergenic	321553	NM_001135820	23670	Hs.494146	NM_013390	ENSG00000135048	TMEM2	-	transmembrane protein 2	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr9-516	chr9	79324512	79326134	+	26.2	1622	"non-coding (NR_131751, exon 7 of 16)"	"non-coding (NR_131751, exon 7 of 16)"	-17992	NM_001308050	158471	Hs.262857	NM_015225	ENSG00000106772	PRUNE2	BMCC1|BNIPXL|C9orf65|KIAA0367	prune homolog 2	protein-coding	26.24	2.91	9.017182131	6.53E-13
chr9-518	chr9	81157726	81158726	+	17.3	1000	Intergenic	Intergenic	246235	NM_021154	29968	Hs.494261	NM_021154	ENSG00000135069	PSAT1	EPIP|NLS2|PSA|PSAT|PSATD	phosphoserine aminotransferase 1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr9-519	chr9	88711393	88716391	+	81.9	4998	"intron (NM_177937, intron 1 of 9)"	CpG	618	NM_016548	51280	Hs.494337	NM_016548	ENSG00000135052	GOLM1	C9orf155|GOLPH2|GP73|HEL46|PSEC0257|bA379P1.3	golgi membrane protein 1	protein-coding	81.93	10.68	7.671348315	1.96E-34
chr9-521	chr9	89239055	89240709	+	25.6	1654	Intergenic	Intergenic	-270480	NM_001185059	79670	Hs.597057	NM_024617	ENSG00000083223	ZCCHC6	PAPD6|TUT7	zinc finger CCHC-type containing 6	protein-coding	25.6	3.88	6.597938144	1.00E-10
chr9-523	chr9	89848105	89849361	+	18.6	1256	Intergenic	Intergenic	85174	NM_001001709	401535	Hs.657740	NM_001001709		C9orf170	-	chromosome 9 open reading frame 170	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr9-526	chr9	91370736	91371736	+	16.6	1000	Intergenic	AluJr|SINE|Alu	-10416	NR_036252	100423015		NR_036252	ENSG00000265873	MIR4289	-	microRNA 4289	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr9-527	chr9	91698152	91699152	+	17.3	1000	"intron (NM_016848, intron 2 of 11)"	"intron (NM_016848, intron 2 of 11)"	92328	NM_005226	1903	Hs.585118	NM_005226	ENSG00000213694	S1PR3	EDG-3|EDG3|LPB3|S1P3	sphingosine-1-phosphate receptor 3	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr9-53	chr9	132193557	132194557	+	26.2	1000	Intergenic	Intergenic	-56882	NR_038955	100506190	Hs.529860	NR_038955		LINC00963	-	long intergenic non-protein coding RNA 963	ncRNA	26.24	5.34	4.913857678	2.00E-08
chr9-532	chr9	92313541	92315885	+	38.4	2344	"intron (NR_024280, intron 4 of 5)"	"intron (NR_024280, intron 4 of 5)"	60015	NR_024280	100129066	Hs.125947	NR_024280	ENSG00000237372	UNQ6494	-	uncharacterized LOC100129066	ncRNA	38.4	5.82	6.597938144	2.56E-15
chr9-542	chr9	93700263	93702368	+	32.6	2105	Intergenic	MLT1B|LTR|ERVL-MaLR	111613	NM_001174167	6850	Hs.371720	NM_003177	ENSG00000165025	SYK	p72-Syk	spleen associated tyrosine kinase	protein-coding	32.64	3.88	8.412371134	3.92E-15
chr9-546	chr9	94655443	94657032	+	23	1589	"intron (NM_004560, intron 1 of 8)"	L1MB3|LINE|L1	56207	NM_004560	4920	Hs.98255	NM_004560	ENSG00000169071	ROR2	BDB|BDB1|NTRKR2	receptor tyrosine kinase like orphan receptor 2	protein-coding	23.04	2.91	7.917525773	4.85E-11
chr9-547	chr9	94903934	94905232	+	17.9	1298	"intron (NR_027341, intron 1 of 3)"	"intron (NR_027341, intron 1 of 3)"	834	NR_027341	158314	Hs.149940	NR_027341		LINC00475	C9orf44	long intergenic non-protein coding RNA 475	ncRNA	17.92	2.91	6.158075601	1.38E-07
chr9-548	chr9	95569645	95572592	+	62.7	2947	promoter-TSS (NR_026868)	promoter-TSS (NR_026868)	-749	NR_136301	101929748	Hs.551296	NR_136301		LOC101929748	-	uncharacterized LOC101929748	ncRNA	62.73	8.74	7.177345538	1.53E-25
chr9-555	chr9	99276591	99277591	+	17.3	1000	"intron (NM_001077181, intron 12 of 13)"	"intron (NM_001077181, intron 12 of 13)"	52112	NM_001077181	8555	Hs.40582	NM_003671	ENSG00000081377	CDC14B	CDC14B3|Cdc14B1|Cdc14B2|hCDC14B	cell division cycle 14B	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr9-557	chr9	100330606	100332027	+	25.6	1421	"exon (NM_001166116, exon 8 of 10)"	"exon (NM_001166116, exon 8 of 10)"	-64389	NM_002486	4686	Hs.595669	NM_002486	ENSG00000136937	NCBP1	CBP80|NCBP|Sto1	nuclear cap binding protein subunit 1	protein-coding	25.6	2.91	8.797250859	6.53E-13
chr9-558	chr9	100563308	100564308	+	16.6	1000	Intergenic	Intergenic	-51729	NM_004473	2304	Hs.159234	NM_004473	ENSG00000178919	FOXE1	FKHL15|FOXE2|HFKH4|HFKL5|NMTC4|TITF2|TTF-2|TTF2	forkhead box E1	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr9-559	chr9	101158651	101159651	+	17.9	1000	"intron (NM_005458, intron 8 of 18)"	"intron (NM_005458, intron 8 of 18)"	-141148	NM_018421	55357	Hs.371016	NM_018421	ENSG00000095383	TBC1D2	PARIS-1|PARIS1|TBC1D2A	TBC1 domain family member 2	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr9-560	chr9	101865624	101866624	+	16.6	1000	Intergenic	Intergenic	-1247	NM_001130916	7046	Hs.494622	NM_004612	ENSG00000106799	TGFBR1	AAT5|ACVRLK4|ALK-5|ALK5|ESS1|LDS1|LDS1A|LDS2A|MSSE|SKR4|TGFR-1|tbetaR-I	transforming growth factor beta receptor 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr9-565	chr9	108418348	108419598	+	21.1	1250	Intergenic	Intergenic	-5765	NM_005421	6887	Hs.247978	NM_005421	ENSG00000186051	TAL2	-	TAL bHLH transcription factor 2	protein-coding	21.12	3.4	6.211764706	2.41E-08
chr9-569	chr9	112358840	112360094	+	19.2	1254	Intergenic	Intergenic	-43601	NM_001037293	114299	Hs.591908	NM_053016	ENSG00000157654	PALM2	AKAP2	paralemmin 2	protein-coding	19.2	3.88	4.948453608	7.67E-07
chr9-570	chr9	112550189	112551189	+	16.6	1000	"intron (NM_001037293, intron 2 of 6)"	"intron (NM_001037293, intron 2 of 6)"	8112	NM_007203	445815	Hs.591908	NM_007203	ENSG00000157654	PALM2-AKAP2	AKAP2	PALM2-AKAP2 readthrough	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr9-572	chr9	116635968	116638359	+	48	2391	Intergenic	Intergenic	-1399	NM_001318040	114991	Hs.349208	NM_133374	ENSG00000157657	ZNF618	FP13169|NEDD10	zinc finger protein 618	protein-coding	48.01	6.8	7.060294118	2.78E-19
chr9-574	chr9	118920109	118921109	+	17.3	1000	"intron (NM_002581, intron 1 of 21)"	"intron (NM_002581, intron 1 of 21)"	4538	NM_002581	5069	Hs.643599	NM_002581	ENSG00000182752	PAPPA	ASBABP2|DIPLA1|IGFBP-4ase|PAPA|PAPP-A|PAPPA1	pappalysin 1	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr9-575	chr9	119648018	119649018	+	17.3	1000	"intron (NM_014010, intron 9 of 21)"	"intron (NM_014010, intron 9 of 21)"	198937	NM_012210	22954	Hs.591910	NM_012210	ENSG00000119401	TRIM32	BBS11|HT2A|LGMD2H|TATIP	tripartite motif containing 32	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr9-580	chr9	124425191	124428975	+	51.8	3784	"intron (NM_032552, intron 1 of 16)"	LTR40a|LTR|ERVL	-77981	NM_138709	153090	Hs.522378	NM_032552	ENSG00000136848	DAB2IP	AF9Q34|AIP-1|AIP1|DIP1/2	DAB2 interacting protein	protein-coding	51.85	10.19	5.088321884	5.82E-16
chr9-588	chr9	125273027	125274288	+	19.8	1261	"exon (NM_054107, exon 1 of 1)"	"exon (NM_054107, exon 1 of 1)"	576	NM_054107	26740	Hs.460145	NM_054107	ENSG00000197233	OR1J2	HG152|HSA5|OR1J3|OR1J5|OR9-19|OST044	olfactory receptor family 1 subfamily J member 2	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr9-592	chr9	127232467	127233467	+	17.3	1000	Intergenic	Intergenic	36732	NM_004959	2516	Hs.495108	NM_004959	ENSG00000136931	NR5A1	AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXY3|hSF-1	nuclear receptor subfamily 5 group A member 1	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr9-593	chr9	127265477	127268547	+	51.8	3070	"intron (NM_004959, intron 1 of 6)"	CpG-27011	2687	NM_004959	2516	Hs.495108	NM_004959	ENSG00000136931	NR5A1	AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXY3|hSF-1	nuclear receptor subfamily 5 group A member 1	protein-coding	51.85	6.31	8.217115689	5.17E-23
chr9-596	chr9	129281429	129285233	+	64.6	3804	Intergenic	Intergenic	-93391	NM_001174147	4010	Hs.129133	NM_002316	ENSG00000136944	LMX1B	LMX1.2|NPS1	LIM homeobox transcription factor 1 beta	protein-coding	64.65	12.13	5.329760923	2.12E-20
chr9-605	chr9	129428420	129429420	+	17.3	1000	"intron (NM_001174147, intron 2 of 7)"	"intron (NM_001174147, intron 2 of 7)"	52198	NM_002316	4010	Hs.129133	NM_002316	ENSG00000136944	LMX1B	LMX1.2|NPS1	LIM homeobox transcription factor 1 beta	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr9-606	chr9	129517141	129518141	+	17.3	1000	Intergenic	Intergenic	-49644	NM_014007	23099	Hs.355581	NM_014007	ENSG00000169155	ZBTB43	ZBTB22B|ZNF-X|ZNF297B	zinc finger and BTB domain containing 43	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr9-615	chr9	133260112	133261112	+	17.9	1000	"intron (NM_001291815, intron 48 of 86)"	"intron (NM_001291815, intron 48 of 86)"	-59482	NM_054012	445	Hs.160786	NM_000050	ENSG00000130707	ASS1	ASS|CTLN1	argininosuccinate synthase 1	protein-coding	17.92	1.94	9.237113402	9.53E-10
chr9-616	chr9	133427139	133428413	+	21.8	1274	Intergenic	Intergenic	27105	NR_027440	100272217	Hs.601255	NR_027440		LOC100272217	-	uncharacterized LOC100272217	ncRNA	21.76	2.91	7.47766323	3.87E-10
chr9-619	chr9	135241528	135242528	+	16.6	1000	Intergenic	L1MB5|LINE|L1	-11656	NM_015046	23064	Hs.460317	NM_015046	ENSG00000107290	SETX	ALS4|AOA2|SCAR1|bA479K20.2	senataxin	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr9-620	chr9	135283897	135286625	+	47.4	2728	promoter-TSS (NM_001282957)	promoter-TSS (NM_001282957)	-322	NM_207417	389799	Hs.201709	NM_207417	ENSG00000188523	CFAP77	C9orf171	cilia and flagella associated protein 77	protein-coding	47.37	8.74	5.419908467	6.98E-16
chr9-625	chr9	135598933	135599933	+	17.9	1000	Intergenic	Intergenic	-53645	NM_138620	64794	Hs.660767	NM_022779	ENSG00000125485	DDX31	PPP1R25	DEAD-box helicase 31	protein-coding	17.92	3.4	5.270588235	8.42E-07
chr9-626	chr9	135637219	135638219	+	16	1000	"intron (NM_152572, intron 11 of 12)"	"intron (NM_152572, intron 11 of 12)"	-91931	NM_138620	64794	Hs.660767	NM_022779	ENSG00000125485	DDX31	PPP1R25	DEAD-box helicase 31	protein-coding	16	2.91	5.498281787	4.98E-06
chr9-628	chr9	136079523	136080523	+	16	1000	TTS (NR_110242)	TTS (NR_110242)	4614	NR_110242	29989	Hs.449629	NM_014581	ENSG00000171102	OBP2B	LCN14|OBPIIb	odorant binding protein 2B	protein-coding	16	1.94	8.24742268	7.67E-08
chr9-630	chr9	137216594	137221900	+	90.3	5306	"intron (NM_002957, intron 1 of 9)"	"intron (NM_002957, intron 1 of 9)"	938	NM_002957	6256	Hs.590886	NM_002957	ENSG00000186350	RXRA	NR2B1	retinoid X receptor alpha	protein-coding	90.25	9.71	9.29454171	1.85E-42
chr9-632	chr9	137417627	137418627	+	16.6	1000	Intergenic	Intergenic	-115524	NM_001278074	1289	Hs.210283	NM_000093	ENSG00000130635	COL5A1	EDSC	collagen type V alpha 1 chain	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr9-634	chr9	137658887	137661841	+	39.7	2954	"intron (NM_001278074, intron 25 of 65)"	"intron (NM_001278074, intron 25 of 65)"	80851	NR_039691	100616333		NR_039691	ENSG00000264744	MIR3689C	-	microRNA 3689c	ncRNA	39.69	2.91	13.63917526	1.57E-24
chr9-636	chr9	138073930	138075181	+	20.5	1251	"intron (NR_046107, intron 1 of 2)"	"intron (NR_046107, intron 1 of 2)"	1100	NR_046107	401557	Hs.640138	NR_046107		LOC401557	-	uncharacterized LOC401557	ncRNA	20.48	3.4	6.023529412	2.41E-08
chr9-641	chr9	138231144	138232144	+	16.6	1000	Intergenic	Intergenic	-3451	NM_173520	157927	Hs.559511	NM_173520		C9orf62	-	chromosome 9 open reading frame 62	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr9-642	chr9	138310613	138311613	+	16.6	1000	Intergenic	Intergenic	52982	NR_038969	100506599	Hs.561897	NR_038969	ENSG00000225361	PPP1R26-AS1	-	PPP1R26 antisense RNA 1	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr9-644	chr9	138985830	138988476	+	32	2646	promoter-TSS (NM_144653)	promoter-TSS (NM_144653)	-22	NM_144653	138151	Hs.112895	NM_144653	ENSG00000148411	NACC2	BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB	NACC family member 2	protein-coding	32	2.91	10.99656357	6.10E-18
chr9-647	chr9	139560946	139562389	+	22.4	1443	"intron (NM_201446, intron 1 of 8)"	MIR3|SINE|MIR	1443	NM_201446	51162	Hs.91481	NM_016215	ENSG00000172889	EGFL7	NEU1|VE-STATIN|ZNEU1	EGF like domain multiple 7	protein-coding	22.4	0.97	23.09278351	1.19E-17
chr9-650	chr9	33189537	33191248	+	25.6	1711	Intergenic	MLT1K|LTR|ERVL-MaLR	22535	NR_108108	101929639	Hs.545818	NR_108108	ENSG00000233554	B4GALT1-AS1	-	B4GALT1 antisense RNA 1	ncRNA	25.6	5.82	4.39862543	7.99E-08
chr9-651	chr9	34587582	34591484	+	69.1	3902	"intron (NM_001207011, intron 1 of 9)"	CpG	202	NM_001842	1271	Hs.129966	NM_001842	ENSG00000122756	CNTFR	-	ciliary neurotrophic factor receptor	protein-coding	69.13	7.28	9.495879121	9.53E-34
chr9-653	chr9	35186344	35187344	+	16.6	1000	"intron (NM_001330653, intron 1 of 39)"	LTR9|LTR|ERV1	24855	NM_006377	10497	Hs.493791	NM_006377	ENSG00000198722	UNC13B	MUNC13|UNC13|Unc13h2	unc-13 homolog B	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr9-656	chr9	35428731	35429731	+	15.4	1000	"intron (NR_003582, intron 2 of 10)"	L1M4c|LINE|L1	22479	NR_110320	158381	Hs.575661	NR_003581	ENSG00000179766	ATP8B5P	FetA	"ATPase phospholipid transporting 8B5, pseudogene"	pseudo	15.36	1.46	10.52054795	3.44E-09
chr9-657	chr9	36035236	36036236	+	16	1000	Intergenic	L1MC5|LINE|L1	-1174	NM_001316345	8434	Hs.388918	NM_021111	ENSG00000122707	RECK	ST15	reversion inducing cysteine rich protein with kazal motifs	protein-coding	16	1.94	8.24742268	7.67E-08
chr9-658	chr9	36135541	36136541	+	16	1000	promoter-TSS (NR_104639)	promoter-TSS (NR_104639)	-492	NR_104641	152007	Hs.493819	NM_022343	ENSG00000122694	GLIPR2	C9orf19|GAPR-1|GAPR1	GLI pathogenesis related 2	protein-coding	16	1.94	8.24742268	7.67E-08
chr9-665	chr9	37708127	37709400	+	19.8	1273	"intron (NM_014907, intron 4 of 15)"	"intron (NM_014907, intron 4 of 15)"	-45037	NM_144964	158234	Hs.655614	NM_144964	ENSG00000165275	TRMT10B	RG9MTD3|bA3J10.9	tRNA methyltransferase 10B	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr9-667	chr9	37731502	37732502	+	17.3	1000	"intron (NM_014907, intron 9 of 15)"	"intron (NM_014907, intron 9 of 15)"	-21798	NM_144964	158234	Hs.655614	NM_144964	ENSG00000165275	TRMT10B	RG9MTD3|bA3J10.9	tRNA methyltransferase 10B	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr9-668	chr9	38238520	38239776	+	19.8	1256	Intergenic	L2b|LINE|L2	-153513	NM_000692	219	Hs.436219	NM_000692	ENSG00000137124	ALDH1B1	ALDH5|ALDHX	aldehyde dehydrogenase 1 family member B1	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr9-670	chr9	71384288	71385288	+	16.6	1000	"intron (NM_003558, intron 2 of 15)"	L2a|LINE|L2	-10134	NM_138333	116224	Hs.655572	NM_138333	ENSG00000187866	FAM122A	C9orf42	family with sequence similarity 122A	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr9-671	chr9	73041530	73042530	+	17.3	1000	Intergenic	MLT1D|LTR|ERVL-MaLR	-12457	NM_001206	687	Hs.150557	NM_001206	ENSG00000119138	KLF9	BTEB|BTEB1	Kruppel like factor 9	protein-coding	17.28	3.4	5.082352941	4.51E-06
chr9-678	chr9	91831786	91832786	+	16.6	1000	Intergenic	Intergenic	-38604	NM_016848	53358	Hs.292737	NM_016848	ENSG00000148082	SHC3	N-Shc|NSHC|RAI|SHCC	SHC adaptor protein 3	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr9-68	chr9	140305033	140307064	+	41	2031	"intron (NR_104599, intron 1 of 2)"	"intron (NR_104599, intron 1 of 2)"	11666	NR_104599	54932	Hs.495553	NM_017820	ENSG00000187609	EXD3	mut-7	exonuclease 3'-5' domain containing 3	protein-coding	40.97	2.91	14.0790378	1.11E-25
chr9-683	chr9	92224870	92226630	+	26.2	1760	Intergenic	Intergenic	5823	NM_006705	10912	Hs.9701	NM_006705	ENSG00000130222	GADD45G	CR6|DDIT2|GADD45gamma|GRP17	growth arrest and DNA damage inducible gamma	protein-coding	26.24	2.91	9.017182131	6.53E-13
chr9-684	chr9	92230911	92231911	+	17.3	1000	Intergenic	Intergenic	11484	NM_006705	10912	Hs.9701	NM_006705	ENSG00000130222	GADD45G	CR6|DDIT2|GADD45gamma|GRP17	growth arrest and DNA damage inducible gamma	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr9-685	chr9	92245790	92248191	+	37.8	2401	Intergenic	Intergenic	-7708	NR_024280	100129066	Hs.125947	NR_024280	ENSG00000237372	UNQ6494	-	uncharacterized LOC100129066	ncRNA	37.76	5.82	6.487972509	1.70E-14
chr9-687	chr9	92264476	92265476	+	16	1000	"intron (NR_024280, intron 1 of 5)"	HAL1|LINE|L1	10278	NR_024280	100129066	Hs.125947	NR_024280	ENSG00000237372	UNQ6494	-	uncharacterized LOC100129066	ncRNA	16	3.4	4.705882353	2.25E-05
chr9-689	chr9	92309258	92310258	+	16.6	1000	"intron (NR_024280, intron 3 of 5)"	"intron (NR_024280, intron 3 of 5)"	55060	NR_024280	100129066	Hs.125947	NR_024280	ENSG00000237372	UNQ6494	-	uncharacterized LOC100129066	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr9-695	chr9	93654209	93656476	+	35.8	2267	"intron (NM_001135052, intron 12 of 12)"	L2a|LINE|L2	65640	NM_001174167	6850	Hs.371720	NM_003177	ENSG00000165025	SYK	p72-Syk	spleen associated tyrosine kinase	protein-coding	35.84	5.82	6.158075601	1.09E-13
chr9-697	chr9	94507803	94508803	+	16.6	1000	"intron (NM_004560, intron 4 of 8)"	"intron (NM_004560, intron 4 of 8)"	-109676	NR_037489	100500902		NR_037489	ENSG00000283351	MIR3910-2	mir-3910-2	microRNA 3910-2	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr9-699	chr9	94581671	94582671	+	16.6	1000	"intron (NM_004560, intron 1 of 8)"	(TG)n|Simple_repeat|Simple_repeat	130273	NM_004560	4920	Hs.98255	NM_004560	ENSG00000169071	ROR2	BDB|BDB1|NTRKR2	receptor tyrosine kinase like orphan receptor 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr9-703	chr9	96014186	96015186	+	17.3	1000	"intron (NM_001282394, intron 7 of 29)"	"intron (NM_001282394, intron 7 of 29)"	67474	NM_001282394	65268	Hs.654856	NM_006648	ENSG00000165238	WNK2	NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43	WNK lysine deficient protein kinase 2	protein-coding	17.28	0.97	17.81443299	2.06E-12
chr9-704	chr9	96590209	96591772	+	23.7	1563	Intergenic	Intergenic	9351	NR_036254	100422927		NR_036254	ENSG00000265347	MIR4291	-	microRNA 4291	ncRNA	23.68	3.88	6.103092784	4.22E-09
chr9-709	chr9	99324375	99325375	+	16.6	1000	"intron (NM_001077181, intron 4 of 13)"	"intron (NM_001077181, intron 4 of 13)"	4328	NM_001077181	8555	Hs.40582	NM_003671	ENSG00000081377	CDC14B	CDC14B3|Cdc14B1|Cdc14B2|hCDC14B	cell division cycle 14B	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr9-711	chr9	100515396	100516396	+	16.6	1000	Intergenic	L1MD3|LINE|L1	-56205	NM_000380	7507	Hs.654364	NM_000380	ENSG00000136936	XPA	XP1|XPAC	"XPA, DNA damage recognition and repair factor"	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr9-712	chr9	101097727	101099269	+	23.7	1542	"intron (NM_005458, intron 13 of 18)"	L2b|LINE|L2	-80495	NM_018421	55357	Hs.371016	NM_018421	ENSG00000095383	TBC1D2	PARIS-1|PARIS1|TBC1D2A	TBC1 domain family member 2	protein-coding	23.68	2.43	9.744855967	2.61E-12
chr9-713	chr9	102470673	102471673	+	16	1000	"intron (NR_109802, intron 3 of 6)"	"intron (NR_109802, intron 3 of 6)"	110998	NR_109802	101928438	Hs.637767	NR_109802	ENSG00000237461	LOC101928438	-	uncharacterized LOC101928438	ncRNA	16	3.88	4.12371134	7.91E-05
chr9-718	chr9	110927779	110928779	+	17.3	1000	Intergenic	Intergenic	-676278	NM_004235	9314	Hs.376206	NM_004235	ENSG00000136826	KLF4	EZF|GKLF	Kruppel like factor 4	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr9-719	chr9	112251337	112252337	+	16	1000	"intron (NM_001145368, intron 1 of 24)"	MER94|DNA|hAT-Blackjack	8756	NM_002829	5774	Hs.436429	NM_002829	ENSG00000070159	PTPN3	PTP-H1|PTPH1	"protein tyrosine phosphatase, non-receptor type 3"	protein-coding	16	2.91	5.498281787	4.98E-06
chr9-722	chr9	116991380	116992656	+	21.1	1276	"intron (NM_032888, intron 14 of 60)"	"intron (NM_032888, intron 14 of 60)"	20304	NR_030255	619556		NR_030255	ENSG00000207726	MIR455	MIRN455|hsa-mir-455|mir-455	microRNA 455	ncRNA	21.12	4.85	4.354639175	2.52E-06
chr9-725	chr9	117169320	117170725	+	19.8	1405	"intron (NM_001346890, intron 4 of 7)"	"intron (NM_001346890, intron 4 of 7)"	-13337	NM_030767	80709	Hs.494895	NM_030767	ENSG00000106948	AKNA	-	AT-hook transcription factor	protein-coding	19.84	1.94	10.22680412	9.57E-11
chr9-726	chr9	117858711	117859711	+	16	1000	"intron (NM_002160, intron 1 of 27)"	"intron (NM_002160, intron 1 of 27)"	21325	NM_002160	3371	Hs.143250	NM_002160	ENSG00000041982	TNC	150-225|DFNA56|GMEM|GP|HXB|JI|TN|TN-C	tenascin C	protein-coding	16	2.43	6.58436214	7.90E-07
chr9-727	chr9	120584444	120585750	+	21.8	1306	Intergenic	Intergenic	118644	NM_138554	7099	Hs.174312	NM_003266	ENSG00000136869	TLR4	ARMD10|CD284|TLR-4|TOLL	toll like receptor 4	protein-coding	21.76	4.85	4.486597938	5.54E-07
chr9-729	chr9	124060899	124063031	+	31.4	2132	promoter-TSS (NM_000177)	promoter-TSS (NM_000177)	-114	NM_000177	2934	Hs.522373	NM_000177	ENSG00000148180	GSN	ADF|AGEL	gelsolin	protein-coding	31.36	1.94	16.16494845	8.26E-21
chr9-731	chr9	124240308	124241308	+	17.3	1000	"intron (NR_045211, intron 1 of 5)"	"intron (NR_045211, intron 1 of 5)"	21498	NR_045211	2681	Hs.97469	NR_003191	ENSG00000204136	GGTA1P	GGTA|GGTA1|GLYT2|a1/3GTP	"glycoprotein, alpha-galactosyltransferase 1 pseudogene"	pseudo	17.28	1.94	8.907216495	8.87E-09
chr9-732	chr9	124410971	124420475	+	152.3	9504	"intron (NM_032552, intron 1 of 16)"	MIRc|SINE|MIR	86342	NM_032552	153090	Hs.522378	NM_032552	ENSG00000136848	DAB2IP	AF9Q34|AIP-1|AIP1|DIP1/2	DAB2 interacting protein	protein-coding	152.34	19.9	7.655276382	2.31E-62
chr9-735	chr9	124460424	124462762	+	32.6	2338	"intron (NM_032552, intron 2 of 16)"	"intron (NM_032552, intron 2 of 16)"	-43471	NM_138709	153090	Hs.522378	NM_032552	ENSG00000136848	DAB2IP	AF9Q34|AIP-1|AIP1|DIP1/2	DAB2 interacting protein	protein-coding	32.64	3.88	8.412371134	3.92E-15
chr9-748	chr9	128930419	128931419	+	16.6	1000	Intergenic	L2a|LINE|L2	107275	NR_121584	101929116	Hs.382124	NR_121584	ENSG00000228392	LOC101929116	-	uncharacterized LOC101929116	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr9-749	chr9	129374878	129375878	+	16.6	1000	Intergenic	CpG	-1344	NM_001174147	4010	Hs.129133	NM_002316	ENSG00000136944	LMX1B	LMX1.2|NPS1	LIM homeobox transcription factor 1 beta	protein-coding	16.64	0.97	17.15463918	2.06E-12
chr9-753	chr9	129408621	129413079	+	68.5	4458	"intron (NM_001174147, intron 2 of 7)"	MIRb|SINE|MIR	34128	NM_002316	4010	Hs.129133	NM_002316	ENSG00000136944	LMX1B	LMX1.2|NPS1	LIM homeobox transcription factor 1 beta	protein-coding	68.49	10.68	6.412921348	4.41E-25
chr9-755	chr9	129991956	129992956	+	17.3	1000	Intergenic	MIRb|SINE|MIR	-33485	NM_001286779	84253	Hs.29304	NM_032293	ENSG00000136895	GARNL3	bA356B19.1	GTPase activating Rap/RanGAP domain like 3	protein-coding	17.28	1.94	8.907216495	8.87E-09
chr9-757	chr9	130154502	130155502	+	16.6	1000	"intron (NM_032293, intron 27 of 27)"	"intron (NM_032293, intron 27 of 27)"	-4415	NM_001271712	29988	Hs.179522	NM_014580	ENSG00000136856	SLC2A8	GLUT8|GLUTX1	solute carrier family 2 member 8	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr9-759	chr9	132017040	132018305	+	20.5	1265	Intergenic	Intergenic	-27023	NR_121587	101929331	Hs.522428	NR_121587	ENSG00000224307	LOC101929331	-	uncharacterized LOC101929331	ncRNA	20.48	0.97	21.11340206	2.68E-16
chr9-760	chr9	132022162	132025607	+	46.7	3445	Intergenic	Intergenic	-20811	NR_121587	101929331	Hs.522428	NR_121587	ENSG00000224307	LOC101929331	-	uncharacterized LOC101929331	ncRNA	46.73	7.77	6.014157014	1.14E-16
chr9-771	chr9	132457663	132458926	+	20.5	1263	"intron (NM_016307, intron 1 of 3)"	"intron (NM_016307, intron 1 of 3)"	22691	NR_132102	101929437	Hs.112596	NR_132102	ENSG00000236024	PRRX2-AS1	-	PRRX2 antisense RNA 1	ncRNA	20.48	2.91	7.037800687	2.92E-09
chr9-772	chr9	132505289	132508712	+	46.1	3423	"intron (NM_004878, intron 2 of 2)"	AluSq2|SINE|Alu	8344	NM_004878	9536	Hs.146688	NM_004878	ENSG00000148344	PTGES	MGST-IV|MGST1-L1|MGST1L1|MPGES|PGES|PIG12|PP102|PP1294|TP53I12|mPGES-1	prostaglandin E synthase	protein-coding	46.09	4.85	9.503092784	4.65E-23
chr9-773	chr9	132955784	132957305	+	21.8	1521	"intron (NM_014286, intron 1 of 7)"	"intron (NM_014286, intron 1 of 7)"	-6328	NM_001128826	23413	Hs.642946	NM_014286	ENSG00000107130	NCS1	FLUP|FREQ	neuronal calcium sensor 1	protein-coding	21.76	3.88	5.608247423	2.53E-08
chr9-774	chr9	133065491	133066491	+	19.8	1000	"intron (NM_001291815, intron 10 of 86)"	"intron (NM_001291815, intron 10 of 86)"	37833	NM_001291815	256158	Hs.32194	NM_144655	ENSG00000148357	HMCN2	-	hemicentin 2	protein-coding	19.84	4.37	4.540045767	3.16E-06
chr9-775	chr9	135288439	135291718	+	46.7	3279	"intron (NM_001282957, intron 1 of 5)"	"intron (NM_001282957, intron 1 of 5)"	4495	NM_001282957	389799	Hs.201709	NM_207417	ENSG00000188523	CFAP77	C9orf171	cilia and flagella associated protein 77	protein-coding	46.73	8.25	5.664242424	7.02E-16
chr9-776	chr9	135299200	135303611	+	64.6	4411	"intron (NM_001282957, intron 1 of 5)"	"intron (NM_001282957, intron 1 of 5)"	15822	NM_001282957	389799	Hs.201709	NM_207417	ENSG00000188523	CFAP77	C9orf171	cilia and flagella associated protein 77	protein-coding	64.65	8.25	7.836363636	1.74E-27
chr9-777	chr9	135323216	135324216	+	16	1000	"intron (NM_001282957, intron 1 of 5)"	"intron (NM_001282957, intron 1 of 5)"	38133	NM_001282957	389799	Hs.201709	NM_207417	ENSG00000188523	CFAP77	C9orf171	cilia and flagella associated protein 77	protein-coding	16	2.43	6.58436214	7.90E-07
chr9-779	chr9	135421250	135422250	+	17.3	1000	"intron (NM_207417, intron 6 of 6)"	"intron (NM_207417, intron 6 of 6)"	-36243	NM_020064	56751	Hs.283809	NM_020064	ENSG00000125492	BARHL1	-	BarH like homeobox 1	protein-coding	17.28	2.43	7.111111111	1.14E-07
chr9-78	chr9	95895026	95896026	+	22.4	1000	"intron (NM_004148, intron 1 of 3)"	"intron (NM_004148, intron 1 of 3)"	1044	NM_004148	4814	Hs.494457	NM_004148	ENSG00000131669	NINJ1	NIN1|NINJURIN	ninjurin 1	protein-coding	22.4	2.91	7.697594502	3.87E-10
chr9-781	chr9	135618967	135619967	+	16.6	1000	"intron (NM_152572, intron 11 of 12)"	"intron (NM_152572, intron 11 of 12)"	-73679	NM_138620	64794	Hs.660767	NM_022779	ENSG00000125485	DDX31	PPP1R25	DEAD-box helicase 31	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr9-784	chr9	136126901	136128352	+	21.8	1451	Intergenic	Intergenic	23004	NM_020469	28	Hs.654423	NM_020469	ENSG00000175164	ABO	A3GALNT|A3GALT1|GTB|NAGAT	"ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase"	protein-coding	21.76	3.4	6.4	3.73E-09
chr9-785	chr9	136137839	136138839	+	16	1000	"intron (NM_020469, intron 1 of 6)"	AluJr|SINE|Alu	12291	NM_020469	28	Hs.654423	NM_020469	ENSG00000175164	ABO	A3GALNT|A3GALT1|GTB|NAGAT	"ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase"	protein-coding	16	3.88	4.12371134	7.91E-05
chr9-786	chr9	136178778	136179778	+	17.3	1000	Intergenic	Intergenic	23769	NR_103874	6838	Hs.274430	NM_006753	ENSG00000148296	SURF6	RRP14	surfeit 6	protein-coding	17.28	3.88	4.453608247	1.81E-05
chr9-787	chr9	136935460	136936460	+	16.6	1000	Intergenic	L2a|LINE|L2	-2819	NM_007371	8019	Hs.522472	NM_007371	ENSG00000169925	BRD3	ORFX|RING3L	bromodomain containing 3	protein-coding	16.64	3.4	4.894117647	4.51E-06
chr9-789	chr9	137095444	137096444	+	17.3	1000	Intergenic	Intergenic	-66258	NR_023344	100151684	Hs.545589	NR_023344	ENSG00000221676	RNU6ATAC	RNU6ATAC1|U6ATAC	"RNA, U6atac small nuclear (U12-dependent splicing)"	snRNA	17.28	2.91	5.93814433	8.60E-07
chr9-792	chr9	137255475	137256836	+	21.8	1361	"intron (NM_002957, intron 1 of 9)"	"intron (NM_002957, intron 1 of 9)"	-14986	NM_001291920	6256	Hs.590886	NM_002957	ENSG00000186350	RXRA	NR2B1	retinoid X receptor alpha	protein-coding	21.76	0.97	22.43298969	1.19E-17
chr9-798	chr9	137777323	137782396	+	69.8	5073	TTS (NM_004108)	TTS (NM_004108)	7201	NM_004108	2220	Hs.54517	NM_004108	ENSG00000160339	FCN2	EBP-37|FCNL|P35|ficolin-2	ficolin 2	protein-coding	69.77	12.13	5.751854905	2.22E-23
chr9-801	chr9	138241613	138242613	+	16	1000	Intergenic	L1MC4a|LINE|L1	7018	NM_173520	157927	Hs.559511	NM_173520		C9orf62	-	chromosome 9 open reading frame 62	protein-coding	16	3.88	4.12371134	7.91E-05
chr9-803	chr9	138345614	138346614	+	15.4	1000	Intergenic	MLT1H-int|LTR|ERVL-MaLR	17981	NR_038969	100506599	Hs.561897	NR_038969	ENSG00000225361	PPP1R26-AS1	-	PPP1R26 antisense RNA 1	ncRNA	15.36	2.91	5.278350515	4.98E-06
chr9-804	chr9	138638755	138639755	+	16.6	1000	"intron (NM_020822, intron 2 of 30)"	"intron (NM_020822, intron 2 of 30)"	45224	NM_001272003	57582	Hs.104950	NM_020822	ENSG00000107147	KCNT1	EIEE14|ENFL5|KCa4.1|SLACK|Slo2.2|bA100C15.2	potassium sodium-activated channel subfamily T member 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr9-805	chr9	139081232	139082232	+	17.3	1000	Intergenic	Intergenic	13287	NM_014564	8022	Hs.148427	NM_014564	ENSG00000107187	LHX3	CPHD3|LIM3|M2-LHX3	LIM homeobox 3	protein-coding	17.28	2.91	5.93814433	8.60E-07
chr9-806	chr9	139148047	139149758	+	25	1711	Intergenic	Intergenic	-11215	NM_181701	169714	Hs.144073	NM_181701	ENSG00000165661	QSOX2	QSCN6L1|SOXN	quiescin sulfhydryl oxidase 2	protein-coding	24.96	1.94	12.86597938	5.33E-15
chr9-807	chr9	139242192	139243586	+	19.8	1394	"intron (NM_001145638, intron 9 of 13)"	"intron (NM_001145638, intron 9 of 13)"	-4620	NM_001145639	26086	Hs.239370	NM_015597	ENSG00000160360	GPSM1	AGS3	G-protein signaling modulator 1	protein-coding	19.84	2.91	6.817869416	2.07E-08
chr9-812	chr9	140062431	140064657	+	43.5	2226	TTS (NM_001185090)	TTS (NM_001185090)	178	NR_037416	100500811		NR_037416	ENSG00000263697	MIR3621	-	microRNA 3621	ncRNA	43.53	1.94	22.43814433	1.10E-33
chr9-813	chr9	140782409	140784039	+	26.9	1630	"intron (NR_121583, intron 1 of 3)"	"intron (NR_121583, intron 1 of 3)"	3798	NR_121583	100133077	Hs.640081	NR_121583	ENSG00000203987	LOC100133077	-	uncharacterized LOC100133077	ncRNA	26.88	1.94	13.8556701	2.90E-17
chr9-819	chr9	34625998	34630660	+	75.5	4662	promoter-TSS (NM_001017363)	promoter-TSS (NM_001017363)	-318	NM_001017363	138715	Hs.534549	NM_001017363	ENSG00000205143	ARID3C	-	AT-rich interaction domain 3C	protein-coding	75.53	11.65	6.483261803	3.63E-28
chr9-824	chr9	36011743	36012743	+	16	1000	Intergenic	Intergenic	-24667	NM_001316345	8434	Hs.388918	NM_021111	ENSG00000122707	RECK	ST15	reversion inducing cysteine rich protein with kazal motifs	protein-coding	16	3.88	4.12371134	7.91E-05
chr9-827	chr9	36782286	36783286	+	16	1000	Intergenic	Intergenic	40810	NR_039686	100616289		NR_039686	ENSG00000266255	MIR4475	-	microRNA 4475	ncRNA	16	2.43	6.58436214	7.90E-07
chr9-829	chr9	36881277	36882277	+	16	1000	"intron (NM_001280549, intron 6 of 7)"	"intron (NM_001280549, intron 6 of 7)"	11751	NR_039687	100616456		NR_039687	ENSG00000265368	MIR4476	mir-4476	microRNA 4476	ncRNA	16	1.94	8.24742268	7.67E-08
chr9-83	chr9	126777018	126782685	+	91.5	5667	"intron (NM_004789, intron 3 of 4)"	CpG-27001	5962	NM_004789	9355	Hs.696425	NM_004789	ENSG00000106689	LHX2	LH2|hLhx2	LIM homeobox 2	protein-coding	91.53	10.19	8.982335623	4.33E-42
chr9-834	chr9	37661426	37662426	+	16	1000	"intron (NM_014907, intron 1 of 15)"	7SK|RNA|RNA	10874	NM_014907	22844	Hs.163990	NM_014907	ENSG00000070601	FRMPD1	FRMD2	FERM and PDZ domain containing 1	protein-coding	16	1.46	10.95890411	3.44E-09
chr9-840	chr9	72659229	72660750	+	27.5	1521	"intron (NM_001347990, intron 2 of 11)"	"intron (NM_001347990, intron 2 of 11)"	1492	NM_153267	256691	Hs.547172	NM_153267	ENSG00000165072	MAMDC2	-	MAM domain containing 2	protein-coding	27.52	1.94	14.18556701	2.90E-17
chr9-841	chr9	74193239	74194239	+	15.4	1000	Intergenic	MER21C|LTR|ERVL	190061	NM_001135820	23670	Hs.494146	NM_013390	ENSG00000135048	TMEM2	-	transmembrane protein 2	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr9-843	chr9	74790287	74791287	+	15.4	1000	"intron (NM_004293, intron 1 of 13)"	"intron (NM_004293, intron 1 of 13)"	26520	NM_004293	9615	Hs.494163	NM_004293	ENSG00000119125	GDA	CYPIN|GUANASE|NEDASIN	guanine deaminase	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-845	chr9	75147638	75148638	+	16.6	1000	"intron (NM_138691, intron 1 of 23)"	"intron (NM_138691, intron 1 of 23)"	11421	NM_138691	117531	Hs.670211	NM_138691	ENSG00000165091	TMC1	DFNA36|DFNB11|DFNB7	transmembrane channel like 1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr9-847	chr9	79530988	79531988	+	16	1000	Intergenic	MER39|LTR|ERV1	-10485	NM_001308048	158471	Hs.262857	NM_015225	ENSG00000106772	PRUNE2	BMCC1|BNIPXL|C9orf65|KIAA0367	prune homolog 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr9-849	chr9	80074711	80075711	+	15.4	1000	"intron (NR_121184, intron 2 of 4)"	MLT1C|LTR|ERVL-MaLR	12646	NR_121184	101927422	Hs.434324	NR_121184	ENSG00000231373	GNA14-AS1	-	GNA14 antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chr9-852	chr9	89393053	89394053	+	15.4	1000	Intergenic	Intergenic	168551	NM_002048	2619	Hs.65029	NM_002048	ENSG00000180447	GAS1	-	growth arrest specific 1	protein-coding	15.36	2.43	6.320987654	7.90E-07
chr9-855	chr9	89953638	89954638	+	16	1000	Intergenic	Intergenic	-158005	NM_001288731	1612	Hs.380277	NM_004938	ENSG00000196730	DAPK1	DAPK	death associated protein kinase 1	protein-coding	16	3.88	4.12371134	7.91E-05
chr9-859	chr9	91664842	91665842	+	16	1000	"intron (NM_016848, intron 7 of 11)"	AluSx|SINE|Alu	59018	NM_005226	1903	Hs.585118	NM_005226	ENSG00000213694	S1PR3	EDG-3|EDG3|LPB3|S1P3	sphingosine-1-phosphate receptor 3	protein-coding	16	2.43	6.58436214	7.90E-07
chr9-861	chr9	91785171	91786171	+	14.7	1000	"intron (NM_016848, intron 1 of 11)"	AT_rich|Low_complexity|Low_complexity	8011	NM_016848	53358	Hs.292737	NM_016848	ENSG00000148082	SHC3	N-Shc|NSHC|RAI|SHCC	SHC adaptor protein 3	protein-coding	14.72	1.46	10.08219178	3.66E-08
chr9-862	chr9	91839203	91840203	+	15.4	1000	Intergenic	Intergenic	-46021	NM_016848	53358	Hs.292737	NM_016848	ENSG00000148082	SHC3	N-Shc|NSHC|RAI|SHCC	SHC adaptor protein 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-865	chr9	92241624	92242889	+	16.6	1265	Intergenic	Intergenic	-12442	NR_024280	100129066	Hs.125947	NR_024280	ENSG00000237372	UNQ6494	-	uncharacterized LOC100129066	ncRNA	16.64	3.88	4.288659794	1.81E-05
chr9-867	chr9	92341677	92342677	+	16	1000	Intergenic	Intergenic	87479	NR_024280	100129066	Hs.125947	NR_024280	ENSG00000237372	UNQ6494	-	uncharacterized LOC100129066	ncRNA	16	0.97	16.49484536	3.54E-11
chr9-868	chr9	92446402	92447797	+	21.1	1395	Intergenic	Intergenic	192401	NR_024280	100129066	Hs.125947	NR_024280	ENSG00000237372	UNQ6494	-	uncharacterized LOC100129066	ncRNA	21.12	2.91	7.257731959	2.92E-09
chr9-870	chr9	92461227	92462227	+	16.6	1000	Intergenic	Intergenic	207029	NR_024280	100129066	Hs.125947	NR_024280	ENSG00000237372	UNQ6494	-	uncharacterized LOC100129066	ncRNA	16.64	0.97	17.15463918	2.06E-12
chr9-872	chr9	92505366	92508548	+	44.2	3182	Intergenic	Intergenic	-224741	NR_109791	101927847	Hs.584312	NR_109791		LOC101927847	-	uncharacterized LOC101927847	ncRNA	44.17	8.74	5.053775744	1.04E-13
chr9-876	chr9	93381367	93382644	+	18.6	1277	"intron (NM_017594, intron 1 of 1)"	L1MB8|LINE|L1	23382	NM_017594	54769	Hs.165636	NM_017594	ENSG00000165023	DIRAS2	Di-Ras2	DIRAS family GTPase 2	protein-coding	18.56	2.91	6.378006873	1.38E-07
chr9-879	chr9	93683380	93684380	+	16	1000	Intergenic	Intergenic	94178	NM_001174167	6850	Hs.371720	NM_003177	ENSG00000165025	SYK	p72-Syk	spleen associated tyrosine kinase	protein-coding	16	3.88	4.12371134	7.91E-05
chr9-89	chr9	139636557	139638127	+	31.4	1570	promoter-TSS (NM_001001712)	promoter-TSS (NM_001001712)	69	NM_001001712	414332	Hs.98132	NM_001001712	ENSG00000187922	LCN10	-	lipocalin 10	protein-coding	31.36	4.85	6.465979381	3.34E-12
chr9-891	chr9	95972661	95973661	+	16.6	1000	"intron (NM_001282394, intron 1 of 29)"	"intron (NM_001282394, intron 1 of 29)"	25949	NM_001282394	65268	Hs.654856	NM_006648	ENSG00000165238	WNK2	NY-CO-43|P/OKcl.13|PRKWNK2|SDCCAG43	WNK lysine deficient protein kinase 2	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr9-893	chr9	96665010	96666010	+	16.6	1000	Intergenic	Intergenic	52098	NM_021570	56033	Hs.164960	NM_021570	ENSG00000131668	BARX1	-	BARX homeobox 1	protein-coding	16.64	1.46	11.39726027	2.99E-10
chr9-896	chr9	98894262	98895701	+	18.6	1439	Intergenic	Intergenic	-16288	NR_132344	158434	Hs.381771	NM_001256408	ENSG00000275465	LOC158434	-	uncharacterized LOC158434	ncRNA	18.56	1.94	9.567010309	9.53E-10
chr9-898	chr9	98902178	98903178	+	16.6	1000	Intergenic	Intergenic	-23985	NR_132344	158434	Hs.381771	NM_001256408	ENSG00000275465	LOC158434	-	uncharacterized LOC158434	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr9-899	chr9	98931442	98933250	+	28.8	1808	Intergenic	Intergenic	-53653	NR_132344	158434	Hs.381771	NM_001256408	ENSG00000275465	LOC158434	-	uncharacterized LOC158434	ncRNA	28.8	3.88	7.422680412	1.97E-12
chr9-900	chr9	99810357	99811357	+	16.6	1000	Intergenic	AluSq2|SINE|Alu	-8932	NM_001201575	1515	Hs.610096	NM_001333	ENSG00000136943	CTSV	CATL2|CTSL2|CTSU	cathepsin V	protein-coding	16.64	2.91	5.718213058	8.60E-07
chr9-901	chr9	99903870	99904870	+	16	1000	Intergenic	MSTA-int|LTR|ERVL-MaLR	-60143	NR_002942	340508	Hs.680438	NR_002942	ENSG00000228376	GAS2L1P2	-	growth arrest specific 2 like 1 pseudogene 2	pseudo	16	3.88	4.12371134	7.91E-05
chr9-903	chr9	100509767	100510767	+	15.4	1000	Intergenic	Intergenic	-50576	NM_000380	7507	Hs.654364	NM_000380	ENSG00000136936	XPA	XP1|XPAC	"XPA, DNA damage recognition and repair factor"	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr9-906	chr9	101123474	101124474	+	14.1	1000	"intron (NM_005458, intron 13 of 18)"	"intron (NM_005458, intron 13 of 18)"	-105971	NM_018421	55357	Hs.371016	NM_018421	ENSG00000095383	TBC1D2	PARIS-1|PARIS1|TBC1D2A	TBC1 domain family member 2	protein-coding	14.08	2.91	4.838487973	2.67E-05
chr9-907	chr9	101146210	101147210	+	16	1000	"intron (NM_005458, intron 11 of 18)"	AluSp|SINE|Alu	-128707	NM_018421	55357	Hs.371016	NM_018421	ENSG00000095383	TBC1D2	PARIS-1|PARIS1|TBC1D2A	TBC1 domain family member 2	protein-coding	16	2.91	5.498281787	4.98E-06
chr9-908	chr9	101315124	101316401	+	17.9	1277	"intron (NM_005458, intron 2 of 18)"	AluJb|SINE|Alu	155717	NM_005458	9568	Hs.198612	NM_005458	ENSG00000136928	GABBR2	GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099	gamma-aminobutyric acid type B receptor subunit 2	protein-coding	17.92	2.43	7.374485597	1.53E-08
chr9-909	chr9	101332528	101333528	+	15.4	1000	"intron (NM_005458, intron 2 of 18)"	"intron (NM_005458, intron 2 of 18)"	138451	NM_005458	9568	Hs.198612	NM_005458	ENSG00000136928	GABBR2	GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099	gamma-aminobutyric acid type B receptor subunit 2	protein-coding	15.36	0.49	31.34693878	1.26E-14
chr9-913	chr9	101672853	101673853	+	16.6	1000	Intergenic	MIRb|SINE|MIR	-32642	NM_001855	1306	Hs.409034	NM_001855	ENSG00000204291	COL15A1	-	collagen type XV alpha 1 chain	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr9-915	chr9	101722666	101723666	+	15.4	1000	"intron (NM_001855, intron 2 of 41)"	"intron (NM_001855, intron 2 of 41)"	17171	NM_001855	1306	Hs.409034	NM_001855	ENSG00000204291	COL15A1	-	collagen type XV alpha 1 chain	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-917	chr9	102092365	102093365	+	16.6	1000	Intergenic	AluSx3|SINE|Alu	44674	NR_102270	100996569	Hs.745280	NR_102270	ENSG00000271086	NAMA	-	"non-protein coding RNA, associated with MAP kinase pathway and growth arrest"	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr9-918	chr9	107954401	107955401	+	16	1000	Intergenic	AluSz|SINE|Alu	-51985	NM_001330731	23446	Hs.573495	NM_022109	ENSG00000070214	SLC44A1	CD92|CDW92|CHTL1|CTL1	solute carrier family 44 member 1	protein-coding	16	2.43	6.58436214	7.90E-07
chr9-919	chr9	108163799	108166750	+	42.9	2951	"intron (NM_001330731, intron 15 of 15)"	AluJr|SINE|Alu	-45041	NM_001330739	83856	Hs.136901	NM_031919	ENSG00000106701	FSD1L	CCDC10|CSDUFD1|FSD1CL|FSD1NL|MIR1	fibronectin type III and SPRY domain containing 1 like	protein-coding	42.89	7.77	5.51994852	2.23E-14
chr9-921	chr9	108180527	108181527	+	16	1000	"intron (NM_001330731, intron 15 of 15)"	"intron (NM_001330731, intron 15 of 15)"	-29288	NM_001330739	83856	Hs.136901	NM_031919	ENSG00000106701	FSD1L	CCDC10|CSDUFD1|FSD1CL|FSD1NL|MIR1	fibronectin type III and SPRY domain containing 1 like	protein-coding	16	1.94	8.24742268	7.67E-08
chr9-923	chr9	112403798	112404798	+	16.6	1000	"intron (NM_001037293, intron 1 of 6)"	MIRc|SINE|MIR	1230	NM_001037293	114299	Hs.591908	NM_053016	ENSG00000157654	PALM2	AKAP2	paralemmin 2	protein-coding	16.64	3.88	4.288659794	1.81E-05
chr9-924	chr9	112591993	112592993	+	16	1000	"intron (NM_001037293, intron 2 of 6)"	MamRep137|DNA|TcMar?	49916	NM_007203	445815	Hs.591908	NM_007203	ENSG00000157654	PALM2-AKAP2	AKAP2	PALM2-AKAP2 readthrough	protein-coding	16	3.88	4.12371134	7.91E-05
chr9-926	chr9	116554701	116556049	+	18.6	1348	Intergenic	Intergenic	-83187	NM_001318040	114991	Hs.349208	NM_133374	ENSG00000157657	ZNF618	FP13169|NEDD10	zinc finger protein 618	protein-coding	18.56	3.88	4.783505155	3.85E-06
chr9-932	chr9	117027030	117030203	+	43.5	3173	"intron (NM_032888, intron 32 of 60)"	"intron (NM_032888, intron 32 of 60)"	-56687	NM_000607	5004	Hs.522356	NM_000607	ENSG00000229314	ORM1	AGP-A|AGP1|HEL-S-153w|ORM	orosomucoid 1	protein-coding	43.53	7.77	5.602316602	3.96E-15
chr9-933	chr9	117309704	117310704	+	16.6	1000	Intergenic	Intergenic	-39790	NM_004888	9550	Hs.388654	NM_004888	ENSG00000136888	ATP6V1G1	ATP6G|ATP6G1|ATP6GL|ATP6J|Vma10	ATPase H+ transporting V1 subunit G1	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr9-934	chr9	117315575	117316575	+	15.4	1000	Intergenic	Intergenic	-33919	NM_004888	9550	Hs.388654	NM_004888	ENSG00000136888	ATP6V1G1	ATP6G|ATP6G1|ATP6GL|ATP6J|Vma10	ATPase H+ transporting V1 subunit G1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chr9-935	chr9	122947815	122948815	+	16	1000	Intergenic	MIR|SINE|MIR	59013	NR_029604	406939		NR_029604	ENSG00000207814	MIR147A	MIR147|MIRN147|hsa-mir-147a	microRNA 147a	ncRNA	16	3.4	4.705882353	2.25E-05
chr9-936	chr9	124140010	124141010	+	14.7	1000	Intergenic	L1MC1|LINE|L1	-7928	NM_198194	2040	Hs.253903	NM_004099	ENSG00000148175	STOM	BND7|EPB7|EPB72	stomatin	protein-coding	14.72	2.91	5.058419244	2.67E-05
chr9-937	chr9	124309604	124310604	+	16.6	1000	Intergenic	Intergenic	-19277	NM_032552	153090	Hs.522378	NM_032552	ENSG00000136848	DAB2IP	AF9Q34|AIP-1|AIP1|DIP1/2	DAB2 interacting protein	protein-coding	16.64	1.94	8.577319588	8.87E-09
chr9-938	chr9	124407063	124408063	+	16	1000	"intron (NM_032552, intron 1 of 16)"	"intron (NM_032552, intron 1 of 16)"	78182	NM_032552	153090	Hs.522378	NM_032552	ENSG00000136848	DAB2IP	AF9Q34|AIP-1|AIP1|DIP1/2	DAB2 interacting protein	protein-coding	16	2.43	6.58436214	7.90E-07
chr9-94	chr9	89814534	89815809	+	23	1275	Intergenic	Charlie1b|DNA|hAT-Charlie	51612	NM_001001709	401535	Hs.657740	NM_001001709		C9orf170	-	chromosome 9 open reading frame 170	protein-coding	23.04	4.85	4.750515464	1.15E-07
chr9-941	chr9	124938658	124939932	+	20.5	1274	"intron (NM_198469, intron 4 of 4)"	LTR50|LTR|ERVL	17108	NM_198469	254956	Hs.71428	NM_198469	ENSG00000185681	MORN5	C9orf113|C9orf18	MORN repeat containing 5	protein-coding	20.48	4.37	4.686498856	6.64E-07
chr9-942	chr9	124943738	124944738	+	16	1000	"intron (NM_198469, intron 4 of 4)"	"intron (NM_198469, intron 4 of 4)"	22051	NM_198469	254956	Hs.71428	NM_198469	ENSG00000185681	MORN5	C9orf113|C9orf18	MORN repeat containing 5	protein-coding	16	1.94	8.24742268	7.67E-08
chr9-944	chr9	125288519	125289519	+	16.6	1000	"exon (NM_012363, exon 1 of 1)"	"exon (NM_012363, exon 1 of 1)"	553	NM_012363	138883	Hs.553604	NM_012363	ENSG00000171505	OR1N1	OR1-26|OR1N3|OR9-22	olfactory receptor family 1 subfamily N member 1	protein-coding	16.64	2.43	6.847736626	1.14E-07
chr9-948	chr9	128843782	128844782	+	16.6	1000	Intergenic	Intergenic	193912	NR_121584	101929116	Hs.382124	NR_121584	ENSG00000228392	LOC101929116	-	uncharacterized LOC101929116	ncRNA	16.64	1.94	8.577319588	8.87E-09
chr9-956	chr9	129462076	129463343	+	19.2	1267	"3' UTR (NM_001174146, exon 8 of 8)"	"3' UTR (NM_001174146, exon 8 of 8)"	85987	NM_002316	4010	Hs.129133	NM_002316	ENSG00000136944	LMX1B	LMX1.2|NPS1	LIM homeobox transcription factor 1 beta	protein-coding	19.2	0	19.77825696	2.52E-19
chr9-960	chr9	132066972	132069509	+	42.2	2537	Intergenic	L1ME2|LINE|L1	-15055	NM_001012715	414318	Hs.449434	NM_001012715		C9orf106	bA65J3.5	chromosome 9 open reading frame 106	protein-coding	42.25	6.31	6.695721078	7.07E-17
chr9-961	chr9	132077763	132078763	+	16	1000	Intergenic	Intergenic	-5032	NM_001012715	414318	Hs.449434	NM_001012715		C9orf106	bA65J3.5	chromosome 9 open reading frame 106	protein-coding	16	3.88	4.12371134	7.91E-05
chr9-964	chr9	132249395	132252402	+	41.6	3007	promoter-TSS (NR_038955)	promoter-TSS (NR_038955)	-41	NR_038955	100506190	Hs.529860	NR_038955		LINC00963	-	long intergenic non-protein coding RNA 963	ncRNA	41.61	6.8	6.119117647	3.54E-15
chr9-97	chr9	99330130	99331130	+	23.7	1000	"intron (NM_003671, intron 1 of 12)"	L1MC|LINE|L1	-1427	NM_001077181	8555	Hs.40582	NM_003671	ENSG00000081377	CDC14B	CDC14B3|Cdc14B1|Cdc14B2|hCDC14B	cell division cycle 14B	protein-coding	23.68	2.91	8.137457045	4.85E-11
chr9-971	chr9	133778879	133780213	+	19.8	1334	"exon (NM_032843, exon 7 of 7)"	"exon (NM_032843, exon 7 of 7)"	-7347	NM_198180	347148	Hs.660704	NM_198180	ENSG00000188710	QRFP	26RFa|P518	pyroglutamylated RFamide peptide	protein-coding	19.84	0.97	20.45360825	5.65E-15
chr9-973	chr9	133970649	133973876	+	51.8	3227	"intron (NM_001185096, intron 2 of 5)"	CpG-27176	399	NM_001185096	83543	Hs.4944	NM_031426	ENSG00000126878	AIF1L	C9orf58|IBA2	allograft inflammatory factor 1 like	protein-coding	51.85	5.82	8.908934708	3.04E-24
chr9-979	chr9	135955070	135956070	+	16.6	1000	Intergenic	LTR9|LTR|ERV1	-2356	NR_001275	1057	Hs.654361	NR_001275	ENSG00000170827	CELP	CELL|cell1|cell2|cell3	carboxyl ester lipase pseudogene	pseudo	16.64	3.88	4.288659794	1.81E-05
chr9-981	chr9	136075097	136076097	+	16	1000	Intergenic	CpG	9040	NR_110242	29989	Hs.449629	NM_014581	ENSG00000171102	OBP2B	LCN14|OBPIIb	odorant binding protein 2B	protein-coding	16	0	16.4818808	1.26E-14
chr9-985	chr9	136478759	136481375	+	38.4	2616	Intergenic	Intergenic	-21418	NM_000787	1621	Hs.591890	NM_000787	ENSG00000123454	DBH	DBM	dopamine beta-hydroxylase	protein-coding	38.4	8.74	4.393592677	5.52E-11
chr9-988	chr9	137614909	137616262	+	22.4	1353	"intron (NM_001278074, intron 4 of 65)"	"intron (NM_001278074, intron 4 of 65)"	-70896	NR_138049	414316	Hs.571561	NR_138049		COL5A1-AS1	C9orf104|bA54A22.4	COL5A1 antisense RNA 1	ncRNA	22.4	4.85	4.618556701	5.54E-07
chr9-989	chr9	137666752	137668017	+	16.6	1265	"intron (NM_001278074, intron 27 of 65)"	"intron (NM_001278074, intron 27 of 65)"	73831	NR_039691	100616333		NR_039691	ENSG00000264744	MIR3689C	-	microRNA 3689c	ncRNA	16.64	2.91	5.718213058	8.60E-07
chr9-990	chr9	137708168	137709763	+	26.2	1595	"intron (NM_001278074, intron 53 of 65)"	"intron (NM_001278074, intron 53 of 65)"	32250	NR_039691	100616333		NR_039691	ENSG00000264744	MIR3689C	-	microRNA 3689c	ncRNA	26.24	0.49	53.55102041	1.06E-27
chr9-991	chr9	137714051	137717805	+	43.5	3754	"intron (NM_001278074, intron 61 of 65)"	"intron (NM_001278074, intron 61 of 65)"	25287	NR_039691	100616333		NR_039691	ENSG00000264744	MIR3689C	-	microRNA 3689c	ncRNA	43.53	8.74	4.980549199	1.04E-13
chr9-994	chr9	137771065	137772065	+	16	1000	Intergenic	Intergenic	-1093	NM_015837	2220	Hs.54517	NM_004108	ENSG00000160339	FCN2	EBP-37|FCNL|P35|ficolin-2	ficolin 2	protein-coding	16	2.43	6.58436214	7.90E-07
chr9-995	chr9	137858483	137861714	+	39.7	3231	Intergenic	Intergenic	-50249	NM_002003	2219	Hs.440898	NM_002003	ENSG00000085265	FCN1	FCNM	ficolin 1	protein-coding	39.69	9.71	4.08753862	1.52E-10
chr9-996	chr9	137997103	137998103	+	15.4	1000	"intron (NM_014279, intron 4 of 5)"	"intron (NM_014279, intron 4 of 5)"	18089	NM_001282611	10439	Hs.522484	NM_006334	ENSG00000130558	OLFM1	AMY|NOE1|NOELIN1|OlfA	olfactomedin 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chr9-999	chr9	138179497	138181187	+	23.7	1690	Intergenic	Intergenic	-54753	NM_173520	157927	Hs.559511	NM_173520		C9orf62	-	chromosome 9 open reading frame 62	protein-coding	23.68	2.91	8.137457045	4.85E-11
chrUn_gl000220-109	chrUn_gl000220	11225	12225	+	33.9	1000	Intergenic	Intergenic	-85404	NR_038958	100507412	Hs.426704	NR_038958		LOC100507412	-	uncharacterized LOC100507412	ncRNA	33.92	7.77	4.365508366	1.68E-09
chrX-105	chrX	137563565	137564830	+	20.5	1265	Intergenic	Intergenic	135602	NR_026935	158696	Hs.558664	NR_026935		LINC00889	-	long intergenic non-protein coding RNA 889	ncRNA	20.48	1.94	10.55670103	9.02E-12
chrX-109	chrX	150481151	150482151	+	17.9	1000	Intergenic	AluSx1|SINE|Alu	-84006	NM_001017980	203547	Hs.58633	NM_001017980	ENSG00000160131	VMA21	MEAX|XMEA	VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	protein-coding	17.92	1.94	9.237113402	9.53E-10
chrX-111	chrX	152754219	152755656	+	26.2	1437	"intron (NR_073156, intron 1 of 12)"	"intron (NR_073156, intron 1 of 12)"	-5410	NM_001711	633	Hs.821	NM_001711	ENSG00000182492	BGN	DSPG1|MRLS|PG-S1|PGI|SEMDX|SLRR1A	biglycan	protein-coding	26.24	3.88	6.762886598	1.00E-10
chrX-114	chrX	8012522	8014000	+	23	1478	Intergenic	Intergenic	-81745	NR_030380	723779		NR_030380	ENSG00000207628	MIR651	MIRN651|hsa-mir-651|mir-651	microRNA 651	ncRNA	23.04	2.91	7.917525773	4.85E-11
chrX-116	chrX	8072159	8073159	+	17.9	1000	Intergenic	Intergenic	-22347	NR_030380	723779		NR_030380	ENSG00000207628	MIR651	MIRN651|hsa-mir-651|mir-651	microRNA 651	ncRNA	17.92	3.4	5.270588235	8.42E-07
chrX-120	chrX	24312899	24314508	+	26.9	1609	Intergenic	Intergenic	17729	NM_001136233	170067	Hs.716893	NM_001136233		SUPT20HL2	FAM48B1|FAM48B2	"SPT20 homolog, SAGA complex component-like 2"	protein-coding	26.88	1.94	13.8556701	2.90E-17
chrX-122	chrX	24424254	24425254	+	16.6	1000	Intergenic	AluJr|SINE|Alu	43876	NM_001136234	100130302	Hs.717243	NM_001136234		SUPT20HL1	FAM48B1|SPT20L	"SPT20 homolog, SAGA complex component-like 1"	protein-coding	16.64	3.4	4.894117647	4.51E-06
chrX-123	chrX	24461350	24463003	+	26.2	1653	Intergenic	Intergenic	-21168	NM_001142386	5165	Hs.296031	NM_005391	ENSG00000067992	PDK3	CMTX6|GS1-358P8.4	pyruvate dehydrogenase kinase 3	protein-coding	26.24	4.85	5.410309278	4.26E-09
chrX-126	chrX	38080058	38081591	+	25.6	1533	promoter-TSS (NM_006307)	promoter-TSS (NM_006307)	-647	NM_001170750	8406	Hs.15154	NM_006307	ENSG00000101955	SRPX	DRS|ETX1|HEL-S-83p|SRPX1	"sushi repeat containing protein, X-linked"	protein-coding	25.6	5.82	4.39862543	7.99E-08
chrX-127	chrX	39762009	39766156	+	65.3	4147	Intergenic	Intergenic	192637	NM_017745	54880	Hs.659681	NM_017745	ENSG00000183337	BCOR	ANOP2|MAA2|MCOPS2	BCL6 corepressor	protein-coding	65.29	8.74	7.470251716	2.79E-27
chrX-128	chrX	47150853	47152580	+	29.4	1727	Intergenic	HERVFH19-int|LTR|ERV1	59402	NM_004651	8237	Hs.171501	NM_004651	ENSG00000102226	USP11	UHX1	ubiquitin specific peptidase 11	protein-coding	29.44	3.88	7.587628866	2.58E-13
chrX-131	chrX	68097154	68098154	+	16.6	1000	Intergenic	Intergenic	48814	NM_004429	1947	Hs.144700	NM_004429	ENSG00000090776	EFNB1	CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2	ephrin B1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chrX-133	chrX	102513936	102514936	+	17.9	1000	Intergenic	Intergenic	-4315	NM_001006684	90843	Hs.389734	NM_153333	ENSG00000180964	TCEAL8	WEX3	transcription elongation factor A like 8	protein-coding	17.92	2.91	6.158075601	1.38E-07
chrX-137	chrX	119135827	119137173	+	23	1346	Intergenic	Intergenic	13008	NR_131250	101928941	Hs.571678	NR_131250	ENSG00000234493	RHOXF1P1	TCONS_00017086|lncRHOXF1	Rhox homeobox family member 1 pseudogene 1	pseudo	23.04	3.88	5.93814433	4.22E-09
chrX-139	chrX	120122076	120123076	+	17.9	1000	Intergenic	MIR3|SINE|MIR	-2938	NM_001080141	728062	Hs.723061	NM_001080141	ENSG00000226023	CT47A6	CT47.6	"cancer/testis antigen family 47, member A6"	protein-coding	17.92	1.94	9.237113402	9.53E-10
chrX-140	chrX	128787555	128788555	+	17.9	1000	"intron (NM_017413, intron 1 of 2)"	CpG	878	NM_017413	8862	Hs.303084	NM_017413	ENSG00000171388	APLN	APEL|XNPEP2	apelin	protein-coding	17.92	3.88	4.618556701	3.85E-06
chrX-142	chrX	130201115	130202115	+	16.6	1000	"intron (NM_001282607, intron 1 of 11)"	"intron (NM_001282607, intron 1 of 11)"	9399	NM_144967	158763	Hs.22905	NM_144967	ENSG00000147256	ARHGAP36	-	Rho GTPase activating protein 36	protein-coding	16.64	2.91	5.718213058	8.60E-07
chrX-143	chrX	131978038	131979038	+	17.3	1000	"intron (NM_001077188, intron 3 of 5)"	"intron (NM_001077188, intron 3 of 5)"	116885	NM_001077188	90161	Hs.385956	NM_147175	ENSG00000171004	HS6ST2	-	heparan sulfate 6-O-sulfotransferase 2	protein-coding	17.28	0	17.80043126	3.68E-16
chrX-147	chrX	149388532	149389800	+	19.8	1268	Intergenic	MLT1D|LTR|ERVL-MaLR	-7073	NR_031748	100313839		NR_031748	ENSG00000252454	MIR2114	-	microRNA 2114	ncRNA	19.84	0.97	20.45360825	5.65E-15
chrX-148	chrX	149483122	149484122	+	17.3	1000	Intergenic	Intergenic	-47923	NM_001177465	10046	Hs.20136	NM_005491	ENSG00000013619	MAMLD1	CG1|CXorf6|F18|HYSP2	mastermind like domain containing 1	protein-coding	17.28	3.88	4.453608247	1.81E-05
chrX-15	chrX	70889315	70890315	+	21.1	1000	"intron (NM_001323075, intron 2 of 5)"	"intron (NM_001323075, intron 2 of 5)"	2263	NM_001323075	101059915	Hs.743148	NM_001323075	ENSG00000283599	LOC101059915	-	chromosome X open reading frame 49-like	protein-coding	21.12	4.37	4.832951945	6.64E-07
chrX-157	chrX	153094793	153095793	+	14.7	1000	promoter-TSS (NM_001303515)	promoter-TSS (NM_001303515)	58	NM_001303515	57595	Hs.92732	NM_032512	ENSG00000067840	PDZD4	LNX5|LU1|PDZK4|PDZRN4L	PDZ domain containing 4	protein-coding	14.72	0.97	15.17525773	5.60E-10
chrX-16	chrX	71365955	71367209	+	25	1254	"intron (NM_207422, intron 1 of 1)"	"intron (NM_207422, intron 1 of 1)"	2548	NM_207422	392490	Hs.660859	NM_207422		FLJ44635	-	TPT1-like protein	protein-coding	24.96	5.34	4.674157303	9.72E-08
chrX-160	chrX	3023057	3024057	+	15.4	1000	"intron (NM_004042, intron 9 of 10)"	AluSx1|SINE|Alu	38717	NM_004042	416	Hs.101674	NM_004042	ENSG00000062096	ARSF	ASF	arylsulfatase F	protein-coding	15.36	2.43	6.320987654	7.90E-07
chrX-161	chrX	3171178	3172178	+	14.7	1000	Intergenic	Intergenic	-18183	NR_038428	100129464	Hs.187816	NR_038428	ENSG00000228459	LINC01546	CXorf28	long intergenic non-protein coding RNA 1546	ncRNA	14.72	2.91	5.058419244	2.67E-05
chrX-162	chrX	18008526	18009526	+	17.3	1000	"intron (NR_133641, intron 2 of 4)"	"intron (NR_133641, intron 2 of 4)"	113738	NR_133641	105373144		NR_133641	ENSG00000225882	LINC01456	-	long intergenic non-protein coding RNA 1456	ncRNA	17.28	3.4	5.082352941	4.51E-06
chrX-165	chrX	25032215	25033215	+	16.6	1000	"intron (NM_139058, intron 1 of 4)"	"intron (NM_139058, intron 1 of 4)"	1350	NM_139058	170302	Hs.300304	NM_139058	ENSG00000004848	ARX	CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS	aristaless related homeobox	protein-coding	16.64	3.88	4.288659794	1.81E-05
chrX-168	chrX	39469251	39471074	+	30.1	1823	Intergenic	MER127|DNA|TcMar-Tigger	-50308	NR_037501	100500822		NR_037501	ENSG00000263730	MIR3937	-	microRNA 3937	ncRNA	30.08	5.82	5.16838488	6.85E-10
chrX-169	chrX	39696888	39698571	+	23	1683	Intergenic	Intergenic	177259	NR_037501	100500822		NR_037501	ENSG00000263730	MIR3937	-	microRNA 3937	ncRNA	23.04	1.94	11.87628866	6.71E-14
chrX-172	chrX	39832627	39834882	+	35.8	2255	Intergenic	Intergenic	122965	NM_017745	54880	Hs.659681	NM_017745	ENSG00000183337	BCOR	ANOP2|MAA2|MCOPS2	BCL6 corepressor	protein-coding	35.84	7.77	4.612612613	8.02E-11
chrX-174	chrX	40238955	40239955	+	16.6	1000	Intergenic	Intergenic	117285	NR_110386	101927476	Hs.522607	NR_110386	ENSG00000236393	LOC101927476	-	uncharacterized LOC101927476	ncRNA	16.64	0	17.14115603	3.68E-16
chrX-175	chrX	40263072	40264072	+	16	1000	Intergenic	LTR26E|LTR|ERV1	141402	NR_110386	101927476	Hs.522607	NR_110386	ENSG00000236393	LOC101927476	-	uncharacterized LOC101927476	ncRNA	16	1.94	8.24742268	7.67E-08
chrX-177	chrX	47562121	47563121	+	16	1000	Intergenic	AluSg7|SINE|Alu	-3969	NR_033924	392459	Hs.562045	NR_033924	ENSG00000187893	CXXC1P1	CXorf25|NCRNA00236	CXXC finger protein 1 pseudogene 1	pseudo	16	2.43	6.58436214	7.90E-07
chrX-178	chrX	47952012	47953012	+	16.6	1000	Intergenic	L2c|LINE|L2	-14855	NR_028366	280657	Hs.511998	NM_173357		SSX6	SSX6P|SSXP2|dJ54B20.1|psiSSX2	"SSX family member 6, pseudogene"	pseudo	16.64	3.88	4.288659794	1.81E-05
chrX-179	chrX	50553539	50554539	+	16	1000	"intron (NR_027121, intron 1 of 9)"	AluJb|SINE|Alu	3005	NR_027121	57477	Hs.420541	NM_020717	ENSG00000158352	SHROOM4	SHAP	shroom family member 4	protein-coding	16	1.46	10.95890411	3.44E-09
chrX-180	chrX	54385371	54386371	+	16	1000	Intergenic	Intergenic	-1433	NM_020922	65267	Hs.92423	NM_020922	ENSG00000196632	WNK3	PRKWNK3	WNK lysine deficient protein kinase 3	protein-coding	16	3.88	4.12371134	7.91E-05
chrX-181	chrX	68605690	68606690	+	17.3	1000	Intergenic	MIRb|SINE|MIR	-118888	NM_015686	27112	Hs.87619	NM_015686	ENSG00000130054	FAM155B	CXorf63|TED|TMEM28|bB57D9.1	family with sequence similarity 155 member B	protein-coding	17.28	0	17.80043126	3.68E-16
chrX-183	chrX	103302079	103303360	+	18.6	1281	Intergenic	MIRb|SINE|MIR	8203	NM_001164416	286436	Hs.376474	NM_001164416	ENSG00000101812	H2BFM	-	H2B histone family member M	protein-coding	18.56	3.88	4.783505155	3.85E-06
chrX-185	chrX	107416001	107417001	+	16	1000	"intron (NM_001847, intron 31 of 44)"	"intron (NM_001847, intron 31 of 44)"	81604	NM_001321288	115201	Hs.8763	NM_052936	ENSG00000101844	ATG4A	APG4A|AUTL2	autophagy related 4A cysteine peptidase	protein-coding	16	1.46	10.95890411	3.44E-09
chrX-187	chrX	109652182	109653182	+	17.3	1000	"intron (NM_001171689, intron 2 of 7)"	"intron (NM_001171689, intron 2 of 7)"	-9603	NM_020769	57529	Hs.201071	NM_020769	ENSG00000243978	RGAG1	MAR9|MART9	retrotransposon gag domain containing 1	protein-coding	17.28	3.4	5.082352941	4.51E-06
chrX-188	chrX	109682502	109683502	+	17.3	1000	"intron (NM_001171689, intron 1 of 7)"	"intron (NM_001171689, intron 1 of 7)"	459	NM_001171689	9949	Hs.656243	NM_015365	ENSG00000101935	AMMECR1	AMMERC1	"Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1"	protein-coding	17.28	2.91	5.93814433	8.60E-07
chrX-190	chrX	118020366	118021366	+	16	1000	Intergenic	HERVP71A-int|LTR|ERV1	47347	NR_110393	101928287	Hs.496647	NR_110393	ENSG00000203650	LINC01285	-	long intergenic non-protein coding RNA 1285	ncRNA	16	3.88	4.12371134	7.91E-05
chrX-194	chrX	119130455	119132209	+	27.5	1754	Intergenic	Intergenic	18176	NR_131250	101928941	Hs.571678	NR_131250	ENSG00000234493	RHOXF1P1	TCONS_00017086|lncRHOXF1	Rhox homeobox family member 1 pseudogene 1	pseudo	27.52	5.82	4.728522337	1.71E-08
chrX-195	chrX	119170395	119171395	+	16.6	1000	"intron (NR_131238, intron 1 of 4)"	LTR49|LTR|ERV1	694	NR_131238	101928969	Hs.659544	NR_131238	ENSG00000258545	RHOXF1-AS1	-	RHOXF1 antisense RNA 1	ncRNA	16.64	2.91	5.718213058	8.60E-07
chrX-197	chrX	130764890	130765890	+	16	1000	Intergenic	Intergenic	87342	NM_001004486	347468	Hs.553711	NM_001004486	ENSG00000171054	OR13H1	ORX1	olfactory receptor family 13 subfamily H member 1	protein-coding	16	0.97	16.49484536	3.54E-11
chrX-198	chrX	136108311	136109311	+	16.6	1000	Intergenic	Intergenic	5022	NM_054021	83550	Hs.350569	NM_054021	ENSG00000165370	GPR101	GPCR6|PAGH2	G protein-coupled receptor 101	protein-coding	16.64	3.4	4.894117647	4.51E-06
chrX-20	chrX	3094752	3095752	+	18.6	1000	Intergenic	Intergenic	-94609	NR_038428	100129464	Hs.187816	NR_038428	ENSG00000228459	LINC01546	CXorf28	long intergenic non-protein coding RNA 1546	ncRNA	18.56	2.91	6.378006873	1.38E-07
chrX-200	chrX	137794026	137795026	+	15.4	1000	promoter-TSS (NM_004114)	promoter-TSS (NM_004114)	257	NR_038405	100129662	Hs.571747	NR_038405	ENSG00000226031	FGF13-AS1	-	FGF13 antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chrX-204	chrX	151787672	151788672	+	16.6	1000	Intergenic	Intergenic	-18465	NM_018558	55879	Hs.283081	NM_018558	ENSG00000268089	GABRQ	THETA	gamma-aminobutyric acid type A receptor theta subunit	protein-coding	16.64	1.94	8.577319588	8.87E-09
chrX-205	chrX	152878534	152880083	+	28.2	1549	Intergenic	L1ME3E|LINE|L1	14513	NR_131982	105373383	Hs.547831	NR_131982	ENSG00000260081	LOC105373383	-	uncharacterized LOC105373383	ncRNA	28.16	3.4	8.282352941	1.50E-13
chrX-208	chrX	5686161	5687161	+	15.4	1000	Intergenic	Intergenic	-457738	NR_136577	105373156	Hs.21107	NR_136577		LOC105373156	-	uncharacterized LOC105373156	ncRNA	15.36	1.94	7.917525773	7.67E-08
chrX-209	chrX	9234841	9235841	+	16.6	1000	Intergenic	Intergenic	-195994	NM_001139468	6907	Hs.495656	NM_005647	ENSG00000101849	TBL1X	EBI|SMAP55|TBL1	transducin beta like 1X-linked	protein-coding	16.64	1.94	8.577319588	8.87E-09
chrX-211	chrX	10126173	10128393	+	32.6	2220	"intron (NM_001256944, intron 2 of 10)"	"intron (NM_001256944, intron 2 of 10)"	2298	NM_001830	1183	Hs.495674	NM_001830	ENSG00000073464	CLCN4	CLC4|ClC-4|ClC-4A|MRX15|MRX49	chloride voltage-gated channel 4	protein-coding	32.64	6.8	4.8	5.32E-10
chrX-215	chrX	13609508	13610508	+	15.4	1000	"intron (NM_015507, intron 2 of 11)"	"intron (NM_015507, intron 2 of 11)"	1597	NR_106734	102466519		NR_106734	ENSG00000283493	MIR6086	hsa-mir-6086	microRNA 6086	ncRNA	15.36	2.91	5.278350515	4.98E-06
chrX-217	chrX	17902625	17903625	+	16	1000	Intergenic	Intergenic	-23668	NM_001172739	10742	Hs.446680	NM_021785	ENSG00000131831	RAI2	-	retinoic acid induced 2	protein-coding	16	2.91	5.498281787	4.98E-06
chrX-218	chrX	19310102	19311102	+	16.6	1000	Intergenic	Intergenic	-51409	NM_001173455	5160	Hs.530331	NM_000284	ENSG00000131828	PDHA1	PDHA|PDHAD|PDHCE1A|PHE1A	pyruvate dehydrogenase (lipoamide) alpha 1	protein-coding	16.64	0.97	17.15463918	2.06E-12
chrX-220	chrX	23387712	23388712	+	16.6	1000	"intron (NM_173495, intron 1 of 2)"	MIR|SINE|MIR	35227	NM_173495	139411	Hs.319503	NM_173495	ENSG00000165186	PTCHD1	AUTSX4	patched domain containing 1	protein-coding	16.64	3.88	4.288659794	1.81E-05
chrX-222	chrX	35182815	35183815	+	16	1000	Intergenic	Intergenic	222402	NM_152631	170062	Hs.197801	NM_152631	ENSG00000189132	FAM47B	-	family with sequence similarity 47 member B	protein-coding	16	3.88	4.12371134	7.91E-05
chrX-223	chrX	37389346	37390346	+	16	1000	Intergenic	L1P3|LINE|L1	-40976	NM_001170331	347404	Hs.521932	NM_198511	ENSG00000147036	LANCL3	-	LanC like 3	protein-coding	16	2.91	5.498281787	4.98E-06
chrX-227	chrX	38869683	38870683	+	16.6	1000	Intergenic	Intergenic	-207047	NR_046706	100874211	Hs.662789	NR_046706		MID1IP1-AS1	-	MID1IP1 antisense RNA 1	ncRNA	16.64	2.43	6.847736626	1.14E-07
chrX-228	chrX	38899381	38900381	+	16	1000	Intergenic	Intergenic	-236745	NR_046706	100874211	Hs.662789	NR_046706		MID1IP1-AS1	-	MID1IP1 antisense RNA 1	ncRNA	16	0.97	16.49484536	3.54E-11
chrX-23	chrX	31284060	31285316	+	22.4	1256	"intron (NM_004023, intron 19 of 30)"	CpG	336	NM_004015	1756	Hs.495912	NM_000109	ENSG00000198947	DMD	BMD|CMD3B|DXS142|DXS164|DXS206|DXS230|DXS239|DXS268|DXS269|DXS270|DXS272|MRX85	dystrophin	protein-coding	22.4	0.97	23.09278351	1.19E-17
chrX-234	chrX	40030953	40031953	+	15.4	1000	"intron (NM_001123384, intron 1 of 13)"	CpG	5129	NM_001123383	54880	Hs.659681	NM_017745	ENSG00000183337	BCOR	ANOP2|MAA2|MCOPS2	BCL6 corepressor	protein-coding	15.36	1.94	7.917525773	7.67E-08
chrX-236	chrX	47147187	47148187	+	16.6	1000	Intergenic	HERVFH19-int|LTR|ERV1	55373	NM_004651	8237	Hs.171501	NM_004651	ENSG00000102226	USP11	UHX1	ubiquitin specific peptidase 11	protein-coding	16.64	2.91	5.718213058	8.60E-07
chrX-237	chrX	47668734	47669734	+	15.4	1000	Intergenic	MER41-int|LTR|ERV1	-27067	NM_007137	347344	Hs.114246	NM_007137	ENSG00000197779	ZNF81	HFZ20|MRX45|dJ54B20.6	zinc finger protein 81	protein-coding	15.36	2.91	5.278350515	4.98E-06
chrX-240	chrX	51081440	51082440	+	16	1000	Intergenic	AluJo|SINE|Alu	6279	NM_001304963	170685	Hs.375178	NM_153183	ENSG00000122824	NUDT10	APS2|DIPP3-alpha|DIPP3a	nudix hydrolase 10	protein-coding	16	2.91	5.498281787	4.98E-06
chrX-241	chrX	53264733	53266058	+	19.8	1325	"intron (NM_001111125, intron 13 of 14)"	"intron (NM_001111125, intron 13 of 14)"	-10791	NM_001146702	8242	Hs.631768	NM_004187	ENSG00000126012	KDM5C	DXS1272E|JARID1C|MRX13|MRXJ|MRXSCJ|MRXSJ|SMCX|XE169	lysine demethylase 5C	protein-coding	19.84	1.94	10.22680412	9.57E-11
chrX-242	chrX	53330178	53331759	+	25	1581	"intron (NM_001111125, intron 1 of 14)"	"intron (NM_001111125, intron 1 of 14)"	19554	NM_001111125	23096	Hs.496138	NM_015075	ENSG00000124313	IQSEC2	BRAG1|MRX1|MRX18|MRX78	IQ motif and Sec7 domain 2	protein-coding	24.96	3.4	7.341176471	7.55E-11
chrX-246	chrX	71083920	71084920	+	16	1000	Intergenic	AluJb|SINE|Alu	-46518	NM_001013627	340527	Hs.397836	NM_001013627	ENSG00000204131	NHSL2	-	NHS like 2	protein-coding	16	3.88	4.12371134	7.91E-05
chrX-247	chrX	71237395	71238395	+	16.6	1000	"intron (NM_001013627, intron 1 of 7)"	"intron (NM_001013627, intron 1 of 7)"	-26364	NR_002309	441502	Hs.449523	NR_002309		RPS26P11	RPS26L1|RPS26_22_1784|bA366E13.1	ribosomal protein S26 pseudogene 11	pseudo	16.64	2.43	6.847736626	1.14E-07
chrX-251	chrX	106970865	106971865	+	16	1000	"intron (NM_001318470, intron 2 of 3)"	L2a|LINE|L2	-11074	NM_004089	1831	Hs.522074	NM_004089	ENSG00000157514	TSC22D3	DIP|DSIPI|GILZ|TSC-22R	TSC22 domain family member 3	protein-coding	16	2.91	5.498281787	4.98E-06
chrX-252	chrX	106991350	106992350	+	15.4	1000	"intron (NM_001318470, intron 2 of 3)"	"intron (NM_001318470, intron 2 of 3)"	27167	NM_198057	1831	Hs.522074	NM_004089	ENSG00000157514	TSC22D3	DIP|DSIPI|GILZ|TSC-22R	TSC22 domain family member 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chrX-255	chrX	109120503	109121503	+	16.6	1000	Intergenic	Intergenic	7373	NR_039659	100616234		NR_039659	ENSG00000283468	MIR4454	-	microRNA 4454	ncRNA	16.64	3.88	4.288659794	1.81E-05
chrX-257	chrX	109919482	109920482	+	16	1000	"intron (NM_001143981, intron 11 of 11)"	"intron (NM_001143981, intron 11 of 11)"	119094	NM_145234	91851	Hs.496587	NM_145234	ENSG00000101938	CHRDL1	CHL|MGC1|MGCN|NRLN1|VOPT|dA141H5.1	chordin like 1	protein-coding	16	3.4	4.705882353	2.25E-05
chrX-258	chrX	111643786	111644786	+	16	1000	"intron (NM_001004308, intron 2 of 2)"	L1MEc|LINE|L1	279089	NM_178175	340596	Hs.297420	NM_178175	ENSG00000182508	LHFPL1	-	lipoma HMGIC fusion partner-like 1	protein-coding	16	3.88	4.12371134	7.91E-05
chrX-261	chrX	118532101	118534220	+	32.6	2119	promoter-TSS (NM_145305)	promoter-TSS (NM_145305)	-98	NM_145305	203427	Hs.496658	NM_145305	ENSG00000077713	SLC25A43	-	solute carrier family 25 member 43	protein-coding	32.64	4.85	6.729896907	5.03E-13
chrX-264	chrX	128668802	128669802	+	16	1000	Intergenic	Intergenic	-4930	NM_001318784	4952	Hs.126357	NM_000276	ENSG00000122126	OCRL	INPP5F|LOCR|NPHL2|OCRL-1|OCRL1	"OCRL, inositol polyphosphate-5-phosphatase"	protein-coding	16	1.46	10.95890411	3.44E-09
chrX-267	chrX	129528555	129529555	+	16	1000	Intergenic	Intergenic	-6888	NM_016024	51634	Hs.740515	NM_016024	ENSG00000134597	RBMX2	CGI-79|Snu17	"RNA binding motif protein, X-linked 2"	protein-coding	16	1.94	8.24742268	7.67E-08
chrX-269	chrX	131522156	131523156	+	15.4	1000	"intron (NM_001170703, intron 4 of 7)"	"intron (NM_001170703, intron 4 of 7)"	24947	NM_001170702	55796	Hs.105134	NM_018388	ENSG00000076770	MBNL3	CHCR|MBLX|MBLX39|MBXL	muscleblind like splicing regulator 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chrX-27	chrX	109038094	109039094	+	20.5	1000	Intergenic	Intergenic	-61962	NM_001318509	2182	Hs.268785	NM_004458	ENSG00000068366	ACSL4	ACS4|FACL4|LACS4|MRX63|MRX68	acyl-CoA synthetase long-chain family member 4	protein-coding	20.48	4.85	4.222680412	2.52E-06
chrX-271	chrX	132575009	132576009	+	14.7	1000	Intergenic	MIRc|SINE|MIR	-26304	NM_001448	2239	Hs.58367	NM_001448	ENSG00000076716	GPC4	K-glypican	glypican 4	protein-coding	14.72	0	15.16333034	3.99E-13
chrX-272	chrX	132580069	132581069	+	16.6	1000	Intergenic	L1ME4a|LINE|L1	-31364	NM_001448	2239	Hs.58367	NM_001448	ENSG00000076716	GPC4	K-glypican	glypican 4	protein-coding	16.64	1.94	8.577319588	8.87E-09
chrX-273	chrX	132918699	132919699	+	16.6	1000	"intron (NM_001164619, intron 1 of 6)"	"intron (NM_001164619, intron 1 of 6)"	200474	NM_001164617	2719	Hs.644108	NM_004484	ENSG00000147257	GPC3	DGSX|GTR2-2|MXR7|OCI-5|SDYS|SGB|SGBS|SGBS1	glypican 3	protein-coding	16.64	3.88	4.288659794	1.81E-05
chrX-274	chrX	134097542	134098542	+	16.6	1000	Intergenic	Intergenic	14463	NR_134925	340581	Hs.434754	NR_134925	ENSG00000236091	LOC340581	-	uncharacterized LOC340581	ncRNA	16.64	3.88	4.288659794	1.81E-05
chrX-275	chrX	134982833	134983833	+	15.4	1000	"intron (NM_018666, intron 2 of 19)"	"intron (NM_018666, intron 2 of 19)"	7548	NM_018666	55511	Hs.195292	NM_018666	ENSG00000181433	SAGE1	CT14|SAGE	sarcoma antigen 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chrX-276	chrX	136253220	136254220	+	16	1000	Intergenic	Intergenic	-139887	NM_054021	83550	Hs.350569	NM_054021	ENSG00000165370	GPR101	GPCR6|PAGH2	G protein-coupled receptor 101	protein-coding	16	0.97	16.49484536	3.54E-11
chrX-282	chrX	149575526	149576526	+	16.6	1000	"intron (NM_001177465, intron 1 of 4)"	"intron (NM_001177465, intron 1 of 4)"	-37694	NM_001177466	10046	Hs.20136	NM_005491	ENSG00000013619	MAMLD1	CG1|CXorf6|F18|HYSP2	mastermind like domain containing 1	protein-coding	16.64	2.91	5.718213058	8.60E-07
chrX-283	chrX	150272167	150273167	+	16.6	1000	Intergenic	L2a|LINE|L2	-64027	NR_036256	100422930		NR_036256	ENSG00000265789	MIR4330	-	microRNA 4330	ncRNA	16.64	3.88	4.288659794	1.81E-05
chrX-285	chrX	152071634	152072634	+	14.7	1000	Intergenic	Intergenic	-10852	NM_001178106	7739	Hs.16622	NM_007150	ENSG00000147394	ZNF185	SCELL	zinc finger protein 185 (LIM domain)	protein-coding	14.72	1.94	7.587628866	6.14E-07
chrX-286	chrX	152567649	152568649	+	15.4	1000	Intergenic	Intergenic	-31464	NM_001080485	10838	Hs.348963	NM_020636	ENSG00000063587	ZNF275	-	zinc finger protein 275	protein-coding	15.36	2.91	5.278350515	4.98E-06
chrX-288	chrX	152792047	152793047	+	16.6	1000	Intergenic	Intergenic	-9033	NM_001001344	492	Hs.533956	NM_021949	ENSG00000067842	ATP2B3	CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1	ATPase plasma membrane Ca2+ transporting 3	protein-coding	16.64	2.91	5.718213058	8.60E-07
chrX-289	chrX	152869600	152870600	+	15.4	1000	Intergenic	Intergenic	5305	NR_131982	105373383	Hs.547831	NR_131982	ENSG00000260081	LOC105373383	-	uncharacterized LOC105373383	ncRNA	15.36	1.94	7.917525773	7.67E-08
chrX-29	chrX	13605654	13606654	+	18.6	1000	"intron (NM_015507, intron 1 of 11)"	MER20|DNA|hAT-Charlie	-2257	NR_106734	102466519		NR_106734	ENSG00000283493	MIR6086	hsa-mir-6086	microRNA 6086	ncRNA	18.56	3.88	4.783505155	3.85E-06
chrX-294	chrX	3043475	3044475	+	15.4	1000	Intergenic	Intergenic	59135	NM_004042	416	Hs.101674	NM_004042	ENSG00000062096	ARSF	ASF	arylsulfatase F	protein-coding	15.36	2.43	6.320987654	7.90E-07
chrX-295	chrX	7985366	7986366	+	14.7	1000	Intergenic	Intergenic	-90086	NM_001142389	8228	Hs.264	NM_004650	ENSG00000006757	PNPLA4	DXS1283E|GS2|iPLA2eta	patatin like phospholipase domain containing 4	protein-coding	14.72	2.91	5.058419244	2.67E-05
chrX-296	chrX	7989711	7990711	+	14.7	1000	Intergenic	AluJb|SINE|Alu	-94431	NM_001142389	8228	Hs.264	NM_004650	ENSG00000006757	PNPLA4	DXS1283E|GS2|iPLA2eta	patatin like phospholipase domain containing 4	protein-coding	14.72	1.94	7.587628866	6.14E-07
chrX-297	chrX	9980785	9982127	+	17.9	1342	Intergenic	Intergenic	-2339	NM_015691	55841	Hs.527524	NM_015691	ENSG00000047644	WWC3	BM042	WWC family member 3	protein-coding	17.92	2.91	6.158075601	1.38E-07
chrX-30	chrX	106941817	106942817	+	18.6	1000	Intergenic	(TTTA)n|Simple_repeat|Simple_repeat	17394	NM_001015881	1831	Hs.522074	NM_004089	ENSG00000157514	TSC22D3	DIP|DSIPI|GILZ|TSC-22R	TSC22 domain family member 3	protein-coding	18.56	4.37	4.247139588	1.41E-05
chrX-301	chrX	12910089	12911377	+	16.6	1288	Intergenic	Intergenic	-14006	NM_016610	51311	Hs.660543	NM_016610	ENSG00000101916	TLR8	CD288	toll like receptor 8	protein-coding	16.64	3.88	4.288659794	1.81E-05
chrX-303	chrX	13955710	13957425	+	28.2	1715	"intron (NM_001318729, intron 1 of 6)"	CpG	376	NM_001001994	2824	Hs.495710	NM_005278	ENSG00000046653	GPM6B	M6B	glycoprotein M6B	protein-coding	28.16	3.88	7.257731959	1.97E-12
chrX-304	chrX	15880494	15881494	+	15.4	1000	Intergenic	AluSq|SINE|Alu	-7857	NM_003916	8905	Hs.121592	NM_003916	ENSG00000182287	AP1S2	DC22|MRX59|MRXS21|MRXS5|MRXSF|PGS|SIGMA1B	adaptor related protein complex 1 sigma 2 subunit	protein-coding	15.36	1.94	7.917525773	7.67E-08
chrX-309	chrX	16936124	16937124	+	14.1	1000	Intergenic	L1MA4A|LINE|L1	-28190	NM_004726	9185	Hs.186810	NM_004726	ENSG00000169891	REPS2	POB1	RALBP1 associated Eps domain containing 2	protein-coding	14.08	0.97	14.51546392	5.60E-10
chrX-31	chrX	130746378	130747700	+	22.4	1322	Intergenic	Intergenic	68991	NM_001004486	347468	Hs.553711	NM_001004486	ENSG00000171054	OR13H1	ORX1	olfactory receptor family 13 subfamily H member 1	protein-coding	22.4	2.91	7.697594502	3.87E-10
chrX-314	chrX	20341110	20342110	+	14.7	1000	Intergenic	Intergenic	-56860	NM_004586	6197	Hs.445387	NM_004586	ENSG00000177189	RPS6KA3	CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2	ribosomal protein S6 kinase A3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chrX-315	chrX	23140946	23141946	+	15.4	1000	"intron (NR_073010, intron 2 of 11)"	"intron (NR_073010, intron 2 of 11)"	123368	NM_182699	168400	Hs.434416	NM_182699	ENSG00000184735	DDX53	CAGE|CT26	DEAD-box helicase 53	protein-coding	15.36	3.4	4.517647059	2.25E-05
chrX-316	chrX	23331476	23332476	+	15.4	1000	Intergenic	AluSx|SINE|Alu	-20713	NR_073010	100873065	Hs.628459	NR_046436		PTCHD1-AS	DDX53-AS1|PTCHD1AS1|PTCHD1AS2	PTCHD1 antisense RNA (head to head)	ncRNA	15.36	3.4	4.517647059	2.25E-05
chrX-317	chrX	23349926	23350926	+	15.4	1000	Intergenic	CpG	-2559	NM_173495	139411	Hs.319503	NM_173495	ENSG00000165186	PTCHD1	AUTSX4	patched domain containing 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chrX-318	chrX	25028559	25029883	+	20.5	1324	"intron (NM_139058, intron 2 of 4)"	"intron (NM_139058, intron 2 of 4)"	4844	NM_139058	170302	Hs.300304	NM_139058	ENSG00000004848	ARX	CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS	aristaless related homeobox	protein-coding	20.48	3.4	6.023529412	2.41E-08
chrX-319	chrX	37856183	37857462	+	19.2	1279	Intergenic	MER52A|LTR|ERV1	6752	NM_012274	25763	Hs.122959	NM_012274	ENSG00000187516	HYPM	CXorf27|HIP17	huntingtin interacting protein M	protein-coding	19.2	1.94	9.896907216	9.57E-11
chrX-32	chrX	152802354	152803354	+	19.2	1000	"intron (NM_021949, intron 1 of 20)"	"intron (NM_021949, intron 1 of 20)"	1274	NM_021949	492	Hs.533956	NM_021949	ENSG00000067842	ATP2B3	CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1	ATPase plasma membrane Ca2+ transporting 3	protein-coding	19.2	3.4	5.647058824	1.47E-07
chrX-320	chrX	38010401	38012107	+	27.5	1706	"intron (NM_001170752, intron 8 of 8)"	"intron (NM_001170752, intron 8 of 8)"	68923	NM_001170751	8406	Hs.15154	NM_006307	ENSG00000101955	SRPX	DRS|ETX1|HEL-S-83p|SRPX1	"sushi repeat containing protein, X-linked"	protein-coding	27.52	6.8	4.047058824	2.13E-07
chrX-325	chrX	39749709	39750709	+	16	1000	Intergenic	Intergenic	206510	NM_017745	54880	Hs.659681	NM_017745	ENSG00000183337	BCOR	ANOP2|MAA2|MCOPS2	BCL6 corepressor	protein-coding	16	2.91	5.498281787	4.98E-06
chrX-327	chrX	39863374	39866714	+	44.2	3340	Intergenic	CpG	91675	NM_017745	54880	Hs.659681	NM_017745	ENSG00000183337	BCOR	ANOP2|MAA2|MCOPS2	BCL6 corepressor	protein-coding	44.17	7.77	5.684684685	3.96E-15
chrX-330	chrX	44160526	44161526	+	15.4	1000	"intron (NM_025184, intron 2 of 14)"	L1ME1|LINE|L1	41897	NM_025184	80258	Hs.521953	NM_025184	ENSG00000183690	EFHC2	MRX74|dJ1158H2.1	EF-hand domain containing 2	protein-coding	15.36	3.4	4.517647059	2.25E-05
chrX-331	chrX	44544346	44545346	+	14.1	1000	Intergenic	Intergenic	-142625	NM_173794	139341	Hs.7549	NM_173794	ENSG00000069509	FUNDC1	-	FUN14 domain containing 1	protein-coding	14.08	1.46	9.643835616	3.66E-08
chrX-335	chrX	48511887	48512887	+	15.4	1000	Intergenic	MSTC|LTR|ERVL-MaLR	-29799	NM_000377	7454	Hs.2157	NM_000377	ENSG00000015285	WAS	IMD2|SCNX|THC|THC1|WASP|WASPA	Wiskott-Aldrich syndrome	protein-coding	15.36	1.46	10.52054795	3.44E-09
chrX-338	chrX	49157167	49158167	+	15.4	1000	Intergenic	Intergenic	-2458	NM_001098413	102724473		NM_001098413	ENSG00000215274	GAGE10	GAGE-10	G antigen 10	protein-coding	15.36	0.97	15.83505155	3.54E-11
chrX-341	chrX	49743919	49744919	+	16	1000	"intron (NM_001127899, intron 3 of 14)"	L1MA8|LINE|L1	-23335	NR_030241	693124		NR_030241	ENSG00000207758	MIR532	MIRN532|hsa-mir-532|mir-532	microRNA 532	ncRNA	16	3.4	4.705882353	2.25E-05
chrX-342	chrX	49957380	49958380	+	15.4	1000	"exon (NM_139289, exon 5 of 6)"	"exon (NM_139289, exon 5 of 6)"	7124	NM_139289	8852	Hs.97633	NM_003886	ENSG00000147081	AKAP4	AKAP 82|AKAP-4|AKAP82|CT99|FSC1|HI|PRKA4|hAKAP82|p82	A-kinase anchoring protein 4	protein-coding	15.36	2.91	5.278350515	4.98E-06
chrX-343	chrX	50424560	50425952	+	20.5	1392	"intron (NR_027121, intron 2 of 9)"	L2a|LINE|L2	131788	NR_027121	57477	Hs.420541	NM_020717	ENSG00000158352	SHROOM4	SHAP	shroom family member 4	protein-coding	20.48	2.91	7.037800687	2.92E-09
chrX-345	chrX	53279342	53280342	+	14.7	1000	"exon (NM_015075, exon 5 of 14)"	"exon (NM_015075, exon 5 of 14)"	-25238	NM_001146702	8242	Hs.631768	NM_004187	ENSG00000126012	KDM5C	DXS1272E|JARID1C|MRX13|MRXJ|MRXSCJ|MRXSJ|SMCX|XE169	lysine demethylase 5C	protein-coding	14.72	1.94	7.587628866	6.14E-07
chrX-346	chrX	53349094	53350094	+	16	1000	"intron (NM_001111125, intron 1 of 14)"	"intron (NM_001111125, intron 1 of 14)"	928	NM_001111125	23096	Hs.496138	NM_015075	ENSG00000124313	IQSEC2	BRAG1|MRX1|MRX18|MRX78	IQ motif and Sec7 domain 2	protein-coding	16	2.43	6.58436214	7.90E-07
chrX-347	chrX	55207353	55208353	+	14.7	1000	TTS (NM_001190708)	TTS (NM_001190708)	1091	NM_001190708	100463488	Hs.722730	NM_001190708	ENSG00000256045	MTRNR2L10	HN10	MT-RNR2-like 10	protein-coding	14.72	2.91	5.058419244	2.67E-05
chrX-351	chrX	68132554	68133554	+	16	1000	Intergenic	Intergenic	84214	NM_004429	1947	Hs.144700	NM_004429	ENSG00000090776	EFNB1	CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2	ephrin B1	protein-coding	16	2.43	6.58436214	7.90E-07
chrX-352	chrX	68707431	68708431	+	16	1000	Intergenic	L1MA6|LINE|L1	-17147	NM_015686	27112	Hs.87619	NM_015686	ENSG00000130054	FAM155B	CXorf63|TED|TMEM28|bB57D9.1	family with sequence similarity 155 member B	protein-coding	16	3.4	4.705882353	2.25E-05
chrX-353	chrX	71023633	71024633	+	13.4	1000	Intergenic	L1M1|LINE|L1	40993	NM_001145139	100132994	Hs.719592	NM_001145139	ENSG00000215113	CXorf49B	CXorf49	chromosome X open reading frame 49B	protein-coding	13.44	0	13.84477987	1.16E-11
chrX-354	chrX	71033158	71034158	+	16	1000	Intergenic	L1M3e|LINE|L1	50518	NM_001145139	100132994	Hs.719592	NM_001145139	ENSG00000215113	CXorf49B	CXorf49	chromosome X open reading frame 49B	protein-coding	16	1.94	8.24742268	7.67E-08
chrX-355	chrX	71068684	71069684	+	16	1000	Intergenic	L2|LINE|L2	-61754	NM_001013627	340527	Hs.397836	NM_001013627	ENSG00000204131	NHSL2	-	NHS like 2	protein-coding	16	3.88	4.12371134	7.91E-05
chrX-359	chrX	71474802	71475802	+	15.4	1000	"intron (NM_001170747, intron 3 of 3)"	"intron (NM_001170747, intron 3 of 3)"	-16444	NM_017669	54821	Hs.47558	NM_017669	ENSG00000186871	ERCC6L	PICH|RAD26L	"ERCC excision repair 6 like, spindle assembly checkpoint helicase"	protein-coding	15.36	0.97	15.83505155	3.54E-11
chrX-360	chrX	73586767	73587767	+	15.4	1000	Intergenic	ERVL-B4-int|LTR|ERVL	-54061	NM_006517	6567	Hs.75317	NM_006517	ENSG00000147100	SLC16A2	AHDS|DXS128|DXS128E|MCT 7|MCT 8|MCT7|MCT8|MRX22|XPCT	solute carrier family 16 member 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chrX-362	chrX	93999598	94002381	+	42.9	2783	Intergenic	THE1C-int|LTR|ERVL-MaLR	317236	NR_031667	100313772		NR_031667	ENSG00000221187	MIR548M	MIRN548M	microRNA 548m	ncRNA	42.89	8.74	4.907322654	5.23E-13
chrX-364	chrX	103009874	103010874	+	14.1	1000	Intergenic	Intergenic	-21060	NM_001128834	5354	Hs.1787	NM_000533	ENSG00000123560	PLP1	GPM6C|HLD1|MMPL|PLP|PLP/DM20|PMD|SPG2	proteolipid protein 1	protein-coding	14.08	1.94	7.257731959	6.14E-07
chrX-37	chrX	25035567	25036567	+	19.8	1000	Intergenic	CpG	-2002	NM_139058	170302	Hs.300304	NM_139058	ENSG00000004848	ARX	CT121|EIEE1|ISSX|MRX29|MRX32|MRX33|MRX36|MRX38|MRX43|MRX54|MRX76|MRX87|MRXS1|PRTS	aristaless related homeobox	protein-coding	19.84	3.4	5.835294118	1.47E-07
chrX-370	chrX	106720210	106721210	+	16	1000	Intergenic	Intergenic	-44970	NM_032428	84443	Hs.496546	NM_032428	ENSG00000147234	FRMPD3	-	FERM and PDZ domain containing 3	protein-coding	16	0.97	16.49484536	3.54E-11
chrX-372	chrX	106973755	106975183	+	21.8	1428	"intron (NM_001318470, intron 2 of 3)"	"intron (NM_001318470, intron 2 of 3)"	-14178	NM_004089	1831	Hs.522074	NM_004089	ENSG00000157514	TSC22D3	DIP|DSIPI|GILZ|TSC-22R	TSC22 domain family member 3	protein-coding	21.76	4.85	4.486597938	5.54E-07
chrX-374	chrX	110039729	110040729	+	15.4	1000	promoter-TSS (NM_001143982)	promoter-TSS (NM_001143982)	-943	NM_001143981	91851	Hs.496587	NM_145234	ENSG00000101938	CHRDL1	CHL|MGC1|MGCN|NRLN1|VOPT|dA141H5.1	chordin like 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chrX-376	chrX	117995376	117996376	+	15.4	1000	"intron (NR_110393, intron 6 of 6)"	"intron (NR_110393, intron 6 of 6)"	22357	NR_110393	101928287	Hs.496647	NR_110393	ENSG00000203650	LINC01285	-	long intergenic non-protein coding RNA 1285	ncRNA	15.36	1.94	7.917525773	7.67E-08
chrX-377	chrX	118051323	118052323	+	15.4	1000	Intergenic	Intergenic	-56754	NM_001031855	79836	Hs.144266	NM_024778	ENSG00000175556	LONRF3	RNF127	LON peptidase N-terminal domain and ring finger 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chrX-378	chrX	118108305	118109305	+	15.4	1000	"exon (NM_001031855, exon 1 of 11)"	"exon (NM_001031855, exon 1 of 11)"	228	NM_024778	79836	Hs.144266	NM_024778	ENSG00000175556	LONRF3	RNF127	LON peptidase N-terminal domain and ring finger 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chrX-38	chrX	39660046	39661046	+	19.2	1000	Intergenic	AluSx|SINE|Alu	140076	NR_037501	100500822		NR_037501	ENSG00000263730	MIR3937	-	microRNA 3937	ncRNA	19.2	2.91	6.597938144	2.07E-08
chrX-384	chrX	128779777	128780777	+	15.4	1000	"3' UTR (NM_017413, exon 3 of 3)"	"3' UTR (NM_017413, exon 3 of 3)"	8656	NM_017413	8862	Hs.303084	NM_017413	ENSG00000171388	APLN	APEL|XNPEP2	apelin	protein-coding	15.36	2.43	6.320987654	7.90E-07
chrX-385	chrX	130043900	130044900	+	15.4	1000	Intergenic	Intergenic	-7109	NM_006375	10495	Hs.171458	NM_006375	ENSG00000165675	ENOX2	APK1|COVA1|tNOX	ecto-NOX disulfide-thiol exchanger 2	protein-coding	15.36	2.43	6.320987654	7.90E-07
chrX-387	chrX	131116227	131117227	+	16	1000	Intergenic	Intergenic	-40518	NM_001042453	51765	Hs.444247	NM_016542	ENSG00000134602	STK26	MASK|MST4	serine/threonine kinase 26	protein-coding	16	2.91	5.498281787	4.98E-06
chrX-388	chrX	131775401	131776401	+	15.4	1000	"intron (NM_147175, intron 3 of 3)"	"intron (NM_147175, intron 3 of 3)"	-25769	NR_046691	100874102	Hs.619341	NR_046691	ENSG00000235849	HS6ST2-AS1	-	HS6ST2 antisense RNA 1	ncRNA	15.36	0	15.82260557	1.26E-14
chrX-39	chrX	39768246	39769246	+	19.2	1000	Intergenic	Intergenic	187973	NM_017745	54880	Hs.659681	NM_017745	ENSG00000183337	BCOR	ANOP2|MAA2|MCOPS2	BCL6 corepressor	protein-coding	19.2	1.94	9.896907216	9.57E-11
chrX-390	chrX	131939926	131941686	+	26.9	1760	"intron (NM_001077188, intron 3 of 5)"	MER58B|DNA|hAT-Charlie	139136	NR_046691	100874102	Hs.619341	NR_046691	ENSG00000235849	HS6ST2-AS1	-	HS6ST2 antisense RNA 1	ncRNA	26.88	1.94	13.8556701	2.90E-17
chrX-393	chrX	134311875	134312875	+	15.4	1000	Intergenic	ERVL-E-int|LTR|ERVL	-6624	NM_017863	54967	Hs.272804	NM_017863	ENSG00000169551	CT55	BJHCC20A|CXorf48	cancer/testis antigen 55	protein-coding	15.36	2.91	5.278350515	4.98E-06
chrX-394	chrX	134531410	134532410	+	14.7	1000	TTS (NR_104652)	TTS (NR_104652)	1556	NR_104652	100506790	Hs.161358	NR_104652	ENSG00000229015	LOC100506790	-	uncharacterized LOC100506790	ncRNA	14.72	1.46	10.08219178	3.66E-08
chrX-396	chrX	136183343	136184343	+	16	1000	Intergenic	Intergenic	-70010	NM_054021	83550	Hs.350569	NM_054021	ENSG00000165370	GPR101	GPCR6|PAGH2	G protein-coupled receptor 101	protein-coding	16	3.88	4.12371134	7.91E-05
chrX-397	chrX	136229208	136230895	+	26.9	1687	Intergenic	Intergenic	-116218	NM_054021	83550	Hs.350569	NM_054021	ENSG00000165370	GPR101	GPCR6|PAGH2	G protein-coupled receptor 101	protein-coding	26.88	3.4	7.905882353	1.25E-12
chrX-398	chrX	136261770	136263128	+	19.8	1358	Intergenic	Intergenic	-148616	NM_054021	83550	Hs.350569	NM_054021	ENSG00000165370	GPR101	GPCR6|PAGH2	G protein-coupled receptor 101	protein-coding	19.84	3.88	5.113402062	7.67E-07
chrX-402	chrX	144668920	144669920	+	14.7	1000	Intergenic	L1PA11|LINE|L1	-229927	NM_001144004	84631	Hs.320368	NM_032539	ENSG00000185985	SLITRK2	CXorf2|SLITL1	SLIT and NTRK like family member 2	protein-coding	14.72	1.46	10.08219178	3.66E-08
chrX-403	chrX	148802029	148803434	+	19.2	1405	Intergenic	HERVK22-int|LTR|ERVK	8993	NM_005366	4110	Hs.670252	NM_005366	ENSG00000185247	MAGEA11	CT1.11|MAGE-11|MAGE11|MAGEA-11	MAGE family member A11	protein-coding	19.2	3.4	5.647058824	1.47E-07
chrX-405	chrX	149530534	149533205	+	44.2	2671	"intron (NM_001177465, intron 1 of 4)"	CpG-28393	324	NM_001177465	10046	Hs.20136	NM_005491	ENSG00000013619	MAMLD1	CG1|CXorf6|F18|HYSP2	mastermind like domain containing 1	protein-coding	44.17	3.88	11.38402062	4.33E-24
chrX-407	chrX	149638568	149639911	+	23	1343	"exon (NM_001177466, exon 2 of 6)"	"exon (NM_001177466, exon 2 of 6)"	25519	NM_005491	10046	Hs.20136	NM_005491	ENSG00000013619	MAMLD1	CG1|CXorf6|F18|HYSP2	mastermind like domain containing 1	protein-coding	23.04	2.91	7.917525773	4.85E-11
chrX-409	chrX	150944645	150945645	+	16	1000	Intergenic	Intergenic	41927	NM_005140	1260	Hs.447360	NM_005140	ENSG00000183862	CNGA2	CNCA|CNCA1|CNG2|OCNC1|OCNCALPHA|OCNCa	cyclic nucleotide gated channel alpha 2	protein-coding	16	0.97	16.49484536	3.54E-11
chrX-41	chrX	52847570	52849267	+	30.1	1697	Intergenic	MIRb|SINE|MIR	7190	NM_130775	170627	Hs.356874	NM_130775	ENSG00000171405	XAGE5	CT12.5|GAGED5|XAGE-5	X antigen family member 5	protein-coding	30.08	2.91	10.33676976	7.13E-16
chrX-410	chrX	152101228	152102544	+	21.1	1316	"intron (NM_001178113, intron 6 of 14)"	"intron (NM_001178113, intron 6 of 14)"	-8329	NM_001178115	7739	Hs.16622	NM_007150	ENSG00000147394	ZNF185	SCELL	zinc finger protein 185 (LIM domain)	protein-coding	21.12	3.88	5.443298969	1.44E-07
chrX-412	chrX	152479252	152481008	+	32	1756	Intergenic	Intergenic	5986	NM_004988	4100	Hs.72879	NM_004988	ENSG00000198681	MAGEA1	CT1.1|MAGE1	MAGE family member A1	protein-coding	32	2.43	13.16872428	9.19E-20
chrX-413	chrX	152673045	152674045	+	16	1000	Intergenic	Intergenic	-10236	NM_001136273	139735	Hs.534554	NM_001136273	ENSG00000189420	ZFP92	ZNF897	ZFP92 zinc finger protein	protein-coding	16	1.94	8.24742268	7.67E-08
chrX-414	chrX	152816760	152817760	+	15.4	1000	"intron (NM_021949, intron 10 of 20)"	"intron (NM_021949, intron 10 of 20)"	15680	NM_021949	492	Hs.533956	NM_021949	ENSG00000067842	ATP2B3	CFAP39|CLA2|OPCA|PMCA3|PMCA3a|SCAX1	ATPase plasma membrane Ca2+ transporting 3	protein-coding	15.36	0.97	15.83505155	3.54E-11
chrX-415	chrX	152897579	152899788	+	39	2209	Intergenic	Intergenic	-9214	NM_001395	1852	Hs.144879	NM_001395	ENSG00000130829	DUSP9	MKP-4|MKP4	dual specificity phosphatase 9	protein-coding	39.04	6.8	5.741176471	1.26E-13
chrX-418	chrX	153106582	153107870	+	21.1	1288	Intergenic	Intergenic	-11204	NM_032512	57595	Hs.92732	NM_032512	ENSG00000067840	PDZD4	LNX5|LU1|PDZK4|PDZRN4L	PDZ domain containing 4	protein-coding	21.12	2.91	7.257731959	2.92E-09
chrX-42	chrX	71524007	71525917	+	39	1910	"intron (NM_001144886, intron 1 of 2)"	CpG	802	NM_001144887	4435	Hs.40403	NM_004143	ENSG00000125931	CITED1	MSG1	Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1	protein-coding	39.04	4.85	8.049484536	2.24E-17
chrX-427	chrX	7949601	7950601	+	12.8	1000	Intergenic	Intergenic	-54321	NM_001142389	8228	Hs.264	NM_004650	ENSG00000006757	PNPLA4	DXS1283E|GS2|iPLA2eta	patatin like phospholipase domain containing 4	protein-coding	12.8	0.97	13.19587629	8.12E-09
chrX-430	chrX	9259890	9260890	+	14.7	1000	Intergenic	(CATG)n|Simple_repeat|Simple_repeat	-170945	NM_001139468	6907	Hs.495656	NM_005647	ENSG00000101849	TBL1X	EBI|SMAP55|TBL1	transducin beta like 1X-linked	protein-coding	14.72	0.97	15.17525773	5.60E-10
chrX-433	chrX	10453266	10454266	+	14.1	1000	"intron (NM_001193280, intron 3 of 5)"	"intron (NM_001193280, intron 3 of 5)"	81877	NM_001193279	4281	Hs.27695	NM_000381	ENSG00000101871	MID1	BBBG1|FXY|GBBB1|MIDIN|OGS1|OS|OSX|RNF59|TRIM18|XPRF|ZNFXY	midline 1	protein-coding	14.08	2.91	4.838487973	2.67E-05
chrX-435	chrX	11994059	11995059	+	13.4	1000	Intergenic	Intergenic	-162026	NM_014728	9758	Hs.657507	NM_014728	ENSG00000169933	FRMPD4	MRX104|PDZD10|PDZK10	FERM and PDZ domain containing 4	protein-coding	13.44	1.94	6.927835052	4.51E-06
chrX-440	chrX	15947206	15948206	+	13.4	1000	Intergenic	Intergenic	-74569	NM_003916	8905	Hs.121592	NM_003916	ENSG00000182287	AP1S2	DC22|MRX59|MRXS21|MRXS5|MRXSF|PGS|SIGMA1B	adaptor related protein complex 1 sigma 2 subunit	protein-coding	13.44	1.46	9.205479452	3.57E-07
chrX-441	chrX	15950555	15951555	+	15.4	1000	Intergenic	Intergenic	-77918	NM_003916	8905	Hs.121592	NM_003916	ENSG00000182287	AP1S2	DC22|MRX59|MRXS21|MRXS5|MRXSF|PGS|SIGMA1B	adaptor related protein complex 1 sigma 2 subunit	protein-coding	15.36	1.94	7.917525773	7.67E-08
chrX-443	chrX	16069265	16070265	+	14.1	1000	Intergenic	LTR8A|LTR|ERV1	-71659	NM_005314	2925	Hs.567282	NM_005314	ENSG00000126010	GRPR	BB2|BB2R	gastrin releasing peptide receptor	protein-coding	14.08	1.46	9.643835616	3.66E-08
chrX-446	chrX	18092246	18093246	+	14.1	1000	"intron (NR_133641, intron 1 of 4)"	"intron (NR_133641, intron 1 of 4)"	30018	NR_133641	105373144		NR_133641	ENSG00000225882	LINC01456	-	long intergenic non-protein coding RNA 1456	ncRNA	14.08	1.94	7.257731959	6.14E-07
chrX-447	chrX	20104552	20105552	+	14.7	1000	"intron (NM_152780, intron 1 of 15)"	MIR|SINE|MIR	29704	NM_001168467	256714	Hs.127951	NM_152780	ENSG00000184368	MAP7D2	-	MAP7 domain containing 2	protein-coding	14.72	2.91	5.058419244	2.67E-05
chrX-45	chrX	118212036	118213309	+	23	1273	TTS (NM_020721)	TTS (NM_020721)	71870	NM_020721	57481	Hs.97594	NM_020721	ENSG00000250423	KIAA1210	-	KIAA1210	protein-coding	23.04	1.94	11.87628866	6.71E-14
chrX-450	chrX	20469420	20470420	+	13.4	1000	Intergenic	L2a|LINE|L2	-185170	NM_004586	6197	Hs.445387	NM_004586	ENSG00000177189	RPS6KA3	CLS|HU-3|ISPK-1|MAPKAPK1B|MRX19|RSK|RSK2|S6K-alpha3|p90-RSK2|pp90RSK2	ribosomal protein S6 kinase A3	protein-coding	13.44	0	13.84477987	1.16E-11
chrX-454	chrX	23354266	23355266	+	14.7	1000	"intron (NM_173495, intron 1 of 2)"	"intron (NM_173495, intron 1 of 2)"	1781	NM_173495	139411	Hs.319503	NM_173495	ENSG00000165186	PTCHD1	AUTSX4	patched domain containing 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chrX-456	chrX	23404925	23405925	+	14.7	1000	"intron (NM_173495, intron 2 of 2)"	"intron (NM_173495, intron 2 of 2)"	52440	NM_173495	139411	Hs.319503	NM_173495	ENSG00000165186	PTCHD1	AUTSX4	patched domain containing 1	protein-coding	14.72	2.91	5.058419244	2.67E-05
chrX-460	chrX	24561469	24562469	+	14.7	1000	"3' UTR (NM_001142386, exon 12 of 12)"	"3' UTR (NM_001142386, exon 12 of 12)"	78625	NM_005391	5165	Hs.296031	NM_005391	ENSG00000067992	PDK3	CMTX6|GS1-358P8.4	pyruvate dehydrogenase kinase 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chrX-461	chrX	24606260	24607260	+	14.7	1000	"intron (NM_001163264, intron 4 of 7)"	MER20|DNA|hAT-Charlie	58695	NM_004845	9468	Hs.660708	NM_004845	ENSG00000102230	PCYT1B	CCTB|CTB	"phosphate cytidylyltransferase 1, choline, beta"	protein-coding	14.72	0.49	30.04081633	3.99E-13
chrX-469	chrX	37831253	37832253	+	16	1000	Intergenic	MER4B-int|LTR|ERV1	-18317	NM_012274	25763	Hs.122959	NM_012274	ENSG00000187516	HYPM	CXorf27|HIP17	huntingtin interacting protein M	protein-coding	16	3.88	4.12371134	7.91E-05
chrX-47	chrX	134834917	134836597	+	28.8	1680	Intergenic	AluSz|SINE|Alu	-11428	NM_001017417	541466	Hs.460937	NM_001017417	ENSG00000268940	CT45A1	CT45|CT45-1|CT45.1	cancer/testis antigen family 45 member A1	protein-coding	28.8	4.85	5.93814433	1.30E-10
chrX-470	chrX	38817782	38818782	+	15.4	1000	Intergenic	MER4D1|LTR|ERV1	-155146	NR_046706	100874211	Hs.662789	NR_046706		MID1IP1-AS1	-	MID1IP1 antisense RNA 1	ncRNA	15.36	1.94	7.917525773	7.67E-08
chrX-472	chrX	39083792	39084792	+	14.7	1000	Intergenic	MLT1K|LTR|ERVL-MaLR	102324	NR_038968	286442	Hs.638478	NR_038968	ENSG00000235304	LINC01281	-	long intergenic non-protein coding RNA 1281	ncRNA	14.72	2.91	5.058419244	2.67E-05
chrX-474	chrX	39344384	39345384	+	14.7	1000	Intergenic	MLT1I|LTR|ERVL-MaLR	-93856	NR_110385	101927449	Hs.553988	NR_110385	ENSG00000236747	LINC01282	-	long intergenic non-protein coding RNA 1282	ncRNA	14.72	1.94	7.587628866	6.14E-07
chrX-48	chrX	136115088	136116375	+	21.1	1287	Intergenic	G-rich|Low_complexity|Low_complexity	-1898	NM_054021	83550	Hs.350569	NM_054021	ENSG00000165370	GPR101	GPCR6|PAGH2	G protein-coupled receptor 101	protein-coding	21.12	2.91	7.257731959	2.92E-09
chrX-480	chrX	40920673	40921673	+	15.4	1000	Intergenic	Intergenic	-23715	NM_001039590	8239	Hs.77578	NM_004652	ENSG00000124486	USP9X	DFFRX|FAF|FAM|MRX99|MRXS99F	"ubiquitin specific peptidase 9, X-linked"	protein-coding	15.36	0.49	31.34693878	1.26E-14
chrX-481	chrX	43683859	43684859	+	14.1	1000	"intron (NM_000898, intron 3 of 14)"	MER63A|DNA|hAT-Blackjack	57362	NM_000898	4129	Hs.654473	NM_000898	ENSG00000069535	MAOB	-	monoamine oxidase B	protein-coding	14.08	0.97	14.51546392	5.60E-10
chrX-482	chrX	43831133	43832133	+	14.7	1000	"intron (NM_000266, intron 1 of 2)"	"intron (NM_000266, intron 1 of 2)"	1288	NM_000266	4693	Hs.522615	NM_000266	ENSG00000124479	NDP	EVR2|FEVR|ND	"NDP, norrin cystine knot growth factor"	protein-coding	14.72	2.91	5.058419244	2.67E-05
chrX-484	chrX	46619706	46620706	+	15.4	1000	Intergenic	MLT1G1|LTR|ERVL-MaLR	-1599	NM_001257291	84679	Hs.91389	NM_032591	ENSG00000065923	SLC9A7	NHE-7|NHE7|SLC9A6	solute carrier family 9 member A7	protein-coding	15.36	2.43	6.320987654	7.90E-07
chrX-487	chrX	49371771	49372771	+	15.4	1000	"non-coding (NR_102272, exon 6 of 6)"	"non-coding (NR_102272, exon 6 of 6)"	8655	NM_001040663	2543	Hs.278606	NM_001468	ENSG00000205777	GAGE1	CT4.1|GAGE-1	G antigen 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chrX-488	chrX	50409826	50410826	+	14.7	1000	"intron (NR_027121, intron 2 of 9)"	"intron (NR_027121, intron 2 of 9)"	146718	NR_027121	57477	Hs.420541	NM_020717	ENSG00000158352	SHROOM4	SHAP	shroom family member 4	protein-coding	14.72	0.97	15.17525773	5.60E-10
chrX-49	chrX	138286553	138287553	+	19.2	1000	"intron (NM_001139500, intron 1 of 6)"	CpG-28366	132	NM_001139498	2258	Hs.6540	NM_004114	ENSG00000129682	FGF13	FGF-13|FGF2|FHF-2|FHF2	fibroblast growth factor 13	protein-coding	19.2	3.88	4.948453608	7.67E-07
chrX-490	chrX	51484415	51485415	+	14.7	1000	Intergenic	Intergenic	-1566	NM_018094	23708	Hs.59523	NM_018094	ENSG00000189369	GSPT2	ERF3B|GST2	G1 to S phase transition 2	protein-coding	14.72	2.43	6.057613169	5.07E-06
chrX-492	chrX	53468636	53469636	+	14.7	1000	Intergenic	Intergenic	-7813	NM_004493	3028	Hs.171280	NM_004493	ENSG00000072506	HSD17B10	17b-HSD10|ABAD|CAMR|DUPXp11.22|ERAB|HADH2|HCD2|MHBD|MRPP2|MRX17|MRX31|MRXS10|SCHAD|SDR5C1	hydroxysteroid 17-beta dehydrogenase 10	protein-coding	14.72	2.43	6.057613169	5.07E-06
chrX-493	chrX	53763448	53764448	+	15.4	1000	Intergenic	L1MDa|LINE|L1	-50274	NM_031407	10075	Hs.136905	NM_031407	ENSG00000086758	HUWE1	ARF-BP1|HECTH9|HSPC272|Ib772|LASU1|MULE|URE-B1|UREB1	"HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase"	protein-coding	15.36	2.91	5.278350515	4.98E-06
chrX-494	chrX	54225707	54226707	+	14.7	1000	"intron (NM_001002838, intron 22 of 22)"	AluSq|SINE|Alu	-16493	NM_001300788	54954	Hs.86045	NM_017848	ENSG00000184083	FAM120C	CXorf17|ORF34	family with sequence similarity 120C	protein-coding	14.72	2.43	6.057613169	5.07E-06
chrX-495	chrX	54325930	54326930	+	14.7	1000	"intron (NM_001002838, intron 6 of 22)"	AluSx1|SINE|Alu	58008	NM_001002838	65267	Hs.92423	NM_020922	ENSG00000196632	WNK3	PRKWNK3	WNK lysine deficient protein kinase 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chrX-496	chrX	67866309	67867681	+	20.5	1372	promoter-TSS (NM_001142503)	promoter-TSS (NM_001142503)	-516	NM_001142503	9754	Hs.95140	NM_014725	ENSG00000130052	STARD8	ARHGAP38|DLC3|STARTGAP3	StAR related lipid transfer domain containing 8	protein-coding	20.48	3.4	6.023529412	2.41E-08
chrX-497	chrX	67993780	67995245	+	19.2	1465	Intergenic	AluJb|SINE|Alu	-54328	NM_004429	1947	Hs.144700	NM_004429	ENSG00000090776	EFNB1	CFND|CFNS|EFB1|EFL3|EPLG2|Elk-L|LERK2	ephrin B1	protein-coding	19.2	1.94	9.896907216	9.57E-11
chrX-499	chrX	68393790	68394790	+	14.7	1000	Intergenic	Intergenic	-5110	NR_103715	100996279		NR_103715	ENSG00000215162	LINC00269	CXorf62|NCRNA00269	long intergenic non-protein coding RNA 269	ncRNA	14.72	1.94	7.587628866	6.14E-07
chrX-504	chrX	71323049	71324049	+	14.7	1000	"intron (NM_001013627, intron 1 of 7)"	"intron (NM_001013627, intron 1 of 7)"	28202	NM_001024455	340526	Hs.512180	NM_001024455	ENSG00000242732	RGAG4	6430402L03Rik|MAR5|MART5	retrotransposon gag domain containing 4	protein-coding	14.72	1.46	10.08219178	3.66E-08
chrX-505	chrX	71334103	71335103	+	15.4	1000	"intron (NM_001013627, intron 1 of 7)"	LTR16A|LTR|ERVL	17148	NM_001024455	340526	Hs.512180	NM_001024455	ENSG00000242732	RGAG4	6430402L03Rik|MAR5|MART5	retrotransposon gag domain containing 4	protein-coding	15.36	0	15.82260557	1.26E-14
chrX-506	chrX	71350258	71351258	+	15.4	1000	"exon (NM_001024455, exon 1 of 2)"	"exon (NM_001024455, exon 1 of 2)"	993	NM_001024455	340526	Hs.512180	NM_001024455	ENSG00000242732	RGAG4	6430402L03Rik|MAR5|MART5	retrotransposon gag domain containing 4	protein-coding	15.36	0.49	31.34693878	1.26E-14
chrX-509	chrX	75386156	75387156	+	15.4	1000	Intergenic	Intergenic	-6108	NM_001300888	51260	Hs.370100	NM_016500	ENSG00000102390	PBDC1	CXorf26	polysaccharide biosynthesis domain containing 1	protein-coding	15.36	2.91	5.278350515	4.98E-06
chrX-51	chrX	152046684	152050347	+	50.6	3663	Intergenic	Intergenic	-34471	NM_001178106	7739	Hs.16622	NM_007150	ENSG00000147394	ZNF185	SCELL	zinc finger protein 185 (LIM domain)	protein-coding	50.57	3.88	13.03350515	1.59E-29
chrX-513	chrX	99650352	99651352	+	14.1	1000	"intron (NM_001105243, intron 2 of 4)"	"intron (NM_001105243, intron 2 of 4)"	14419	NM_020766	57526	Hs.4993	NM_020766	ENSG00000165194	PCDH19	EFMR|EIEE9	protocadherin 19	protein-coding	14.08	1.94	7.257731959	6.14E-07
chrX-516	chrX	102530130	102531130	+	14.7	1000	"intron (NM_001012979, intron 1 of 2)"	"intron (NM_001012979, intron 1 of 2)"	1167	NM_001012979	340543	Hs.403462	NM_001012979	ENSG00000204065	TCEAL5	WEX4	transcription elongation factor A like 5	protein-coding	14.72	2.91	5.058419244	2.67E-05
chrX-521	chrX	106458580	106459580	+	16	1000	"intron (NM_173494, intron 2 of 6)"	"intron (NM_173494, intron 2 of 6)"	9218	NM_173494	139212	Hs.128836	NM_173494	ENSG00000080572	PIH1D3	CXorf41|NYSAR97	PIH1 domain containing 3	protein-coding	16	3.4	4.705882353	2.25E-05
chrX-522	chrX	106679031	106680031	+	14.7	1000	Intergenic	Intergenic	-86149	NM_032428	84443	Hs.496546	NM_032428	ENSG00000147234	FRMPD3	-	FERM and PDZ domain containing 3	protein-coding	14.72	2.91	5.058419244	2.67E-05
chrX-524	chrX	107034235	107035235	+	14.7	1000	Intergenic	AluJb|SINE|Alu	-15517	NM_001318468	1831	Hs.522074	NM_004089	ENSG00000157514	TSC22D3	DIP|DSIPI|GILZ|TSC-22R	TSC22 domain family member 3	protein-coding	14.72	0.97	15.17525773	5.60E-10
chrX-525	chrX	107068334	107069981	+	26.2	1647	promoter-TSS (NM_052817)	promoter-TSS (NM_052817)	73	NM_052817	11043	Hs.12256	NM_012216	ENSG00000080561	MID2	FXY2|MRX101|RNF60|TRIM1	midline 2	protein-coding	26.24	1.94	13.5257732	4.03E-16
chrX-526	chrX	107476015	107477015	+	15.4	1000	"intron (NM_001847, intron 3 of 44)"	"intron (NM_001847, intron 3 of 44)"	141618	NM_001321288	115201	Hs.8763	NM_052936	ENSG00000101844	ATG4A	APG4A|AUTL2	autophagy related 4A cysteine peptidase	protein-coding	15.36	2.43	6.320987654	7.90E-07
chrX-527	chrX	107549201	107550201	+	15.4	1000	"intron (NM_001847, intron 3 of 44)"	"intron (NM_001847, intron 3 of 44)"	131959	NM_001287760	1288	Hs.145586	NM_001847	ENSG00000197565	COL4A6	CXDELq22.3|DELXq22.3|DFNX6	collagen type IV alpha 6 chain	protein-coding	15.36	2.91	5.278350515	4.98E-06
chrX-531	chrX	110329477	110330477	+	15.4	1000	"intron (NM_001128166, intron 2 of 15)"	MamRep434|DNA|TcMar-Tigger	-9393	NM_001324326	5063	Hs.593599	NM_002578	ENSG00000077264	PAK3	ARA|MRX30|MRX47|OPHN3|PAK-3|PAK3beta|bPAK|beta-PAK	p21 (RAC1) activated kinase 3	protein-coding	15.36	1.94	7.917525773	7.67E-08
chrX-535	chrX	117957111	117958628	+	22.4	1517	"5' UTR (NM_001312891, exon 1 of 3)"	"5' UTR (NM_001312891, exon 1 of 3)"	163	NM_001312891	170261	Hs.21417	NM_173798	ENSG00000174460	ZCCHC12	PNMA7A|SIZN|SIZN1	zinc finger CCHC-type containing 12	protein-coding	22.4	2.91	7.697594502	3.87E-10
chrX-536	chrX	118198525	118199525	+	15.4	1000	Intergenic	Intergenic	85517	NM_020721	57481	Hs.97594	NM_020721	ENSG00000250423	KIAA1210	-	KIAA1210	protein-coding	15.36	1.94	7.917525773	7.67E-08
chrX-537	chrX	118269180	118270180	+	15.4	1000	"intron (NM_020721, intron 2 of 13)"	"intron (NM_020721, intron 2 of 13)"	14862	NM_020721	57481	Hs.97594	NM_020721	ENSG00000250423	KIAA1210	-	KIAA1210	protein-coding	15.36	1.94	7.917525773	7.67E-08
chrX-538	chrX	118377655	118378655	+	14.7	1000	"3' UTR (NM_001282621, exon 2 of 2)"	"3' UTR (NM_001282621, exon 2 of 2)"	7947	NM_001282621	10857	Hs.90061	NM_006667	ENSG00000101856	PGRMC1	HPR6.6|MPR	progesterone receptor membrane component 1	protein-coding	14.72	0.97	15.17525773	5.60E-10
chrX-541	chrX	118987760	118988760	+	14.7	1000	Intergenic	AluSx1|SINE|Alu	-1269	NM_023010	65109	Hs.103832	NM_023010	ENSG00000125351	UPF3B	HUPF3B|MRX62|MRXS14|RENT3B|UPF3BP1|UPF3BP2|UPF3BP3|UPF3X|Upf3p-X	UPF3 regulator of nonsense transcripts homolog B (yeast)	protein-coding	14.72	2.91	5.058419244	2.67E-05
chrX-542	chrX	119085628	119086628	+	15.4	1000	Intergenic	AluJb|SINE|Alu	-8393	NM_024528	79576	Hs.522771	NM_024528	ENSG00000101882	NKAP	-	NFKB activating protein	protein-coding	15.36	0.49	31.34693878	1.26E-14
chrX-543	chrX	119124117	119125117	+	15.4	1000	Intergenic	CpG	24891	NR_131250	101928941	Hs.571678	NR_131250	ENSG00000234493	RHOXF1P1	TCONS_00017086|lncRHOXF1	Rhox homeobox family member 1 pseudogene 1	pseudo	15.36	0.97	15.83505155	3.54E-11
chrX-546	chrX	119872864	119873864	+	15.4	1000	Intergenic	Intergenic	-109359	NM_152692	29071	Hs.643920	NM_152692	ENSG00000171155	C1GALT1C1	C1GALT2|C38H2-L1|COSMC|HSPC067|MST143|TNPS	C1GALT1 specific chaperone 1	protein-coding	15.36	3.4	4.517647059	2.25E-05
chrX-548	chrX	128791702	128792702	+	15.4	1000	Intergenic	Intergenic	-3269	NM_017413	8862	Hs.303084	NM_017413	ENSG00000171388	APLN	APEL|XNPEP2	apelin	protein-coding	15.36	0.49	31.34693878	1.26E-14
chrX-549	chrX	129067985	129068985	+	14.7	1000	Intergenic	Intergenic	28388	NM_006649	10813	Hs.458598	NM_006649	ENSG00000156697	UTP14A	NYCO16|SDCCAG16|dJ537K23.3	UTP14A small subunit processome component	protein-coding	14.72	2.91	5.058419244	2.67E-05
chrX-554	chrX	130790202	130791202	+	14.7	1000	Intergenic	L1P2|LINE|L1	112654	NM_001004486	347468	Hs.553711	NM_001004486	ENSG00000171054	OR13H1	ORX1	olfactory receptor family 13 subfamily H member 1	protein-coding	14.72	1.46	10.08219178	3.66E-08
chrX-555	chrX	130929335	130930335	+	15.4	1000	"intron (NR_026975, intron 4 of 12)"	"intron (NR_026975, intron 4 of 12)"	34836	NR_026975	286467	Hs.720385	NR_026975	ENSG00000213468	FIRRE	LINC01200	firre intergenic repeating RNA element	ncRNA	15.36	2.43	6.320987654	7.90E-07
chrX-556	chrX	131652467	131653467	+	13.4	1000	Intergenic	L2a|LINE|L2	-28971	NM_001170704	55796	Hs.105134	NM_018388	ENSG00000076770	MBNL3	CHCR|MBLX|MBLX39|MBXL	muscleblind like splicing regulator 3	protein-coding	13.44	2.43	5.530864198	2.99E-05
chrX-557	chrX	131800870	131801870	+	15.4	1000	promoter-TSS (NR_046691)	promoter-TSS (NR_046691)	-300	NR_046691	100874102	Hs.619341	NR_046691	ENSG00000235849	HS6ST2-AS1	-	HS6ST2 antisense RNA 1	ncRNA	15.36	1.46	10.52054795	3.44E-09
chrX-559	chrX	132523905	132524905	+	14.7	1000	"intron (NM_001448, intron 1 of 8)"	"intron (NM_001448, intron 1 of 8)"	24800	NM_001448	2239	Hs.58367	NM_001448	ENSG00000076716	GPC4	K-glypican	glypican 4	protein-coding	14.72	2.91	5.058419244	2.67E-05
chrX-566	chrX	134995028	134996028	+	15.4	1000	TTS (NM_018666)	TTS (NM_018666)	19743	NM_018666	55511	Hs.195292	NM_018666	ENSG00000181433	SAGE1	CT14|SAGE	sarcoma antigen 1	protein-coding	15.36	1.94	7.917525773	7.67E-08
chrX-568	chrX	136416705	136417705	+	15.4	1000	Intergenic	Intergenic	-231081	NM_001330661	7547	Hs.111227	NM_003413	ENSG00000156925	ZIC3	HTX|HTX1|VACTERLX|ZNF203	Zic family member 3	protein-coding	15.36	2.91	5.278350515	4.98E-06
chrX-574	chrX	146941142	146942142	+	14.7	1000	Intergenic	Intergenic	51693	NR_024502	100126270	Hs.561999	NR_024499	ENSG00000268066	FMR1-AS1	ASFMR1|FMR1-AS|FMR1AS|FMR4	FMR1 antisense RNA 1	ncRNA	14.72	0.97	15.17525773	5.60E-10
chrX-575	chrX	149436303	149437303	+	15.4	1000	Intergenic	Intergenic	40564	NR_031748	100313839		NR_031748	ENSG00000252454	MIR2114	-	microRNA 2114	ncRNA	15.36	0.97	15.83505155	3.54E-11
chrX-576	chrX	149538638	149539638	+	13.4	1000	"intron (NM_001177465, intron 1 of 4)"	"intron (NM_001177465, intron 1 of 4)"	7593	NM_001177465	10046	Hs.20136	NM_005491	ENSG00000013619	MAMLD1	CG1|CXorf6|F18|HYSP2	mastermind like domain containing 1	protein-coding	13.44	0.97	13.8556701	8.12E-09
chrX-578	chrX	149659533	149660533	+	15.4	1000	"intron (NM_005491, intron 4 of 6)"	"intron (NM_005491, intron 4 of 6)"	46313	NM_005491	10046	Hs.20136	NM_005491	ENSG00000013619	MAMLD1	CG1|CXorf6|F18|HYSP2	mastermind like domain containing 1	protein-coding	15.36	0.97	15.83505155	3.54E-11
chrX-579	chrX	149728150	149729150	+	14.1	1000	Intergenic	L1MB2|LINE|L1	-8397	NM_000252	4534	Hs.655056	NM_000252	ENSG00000171100	MTM1	CNM|MTMX|XLMTM	myotubularin 1	protein-coding	14.08	2.43	5.794238683	5.07E-06
chrX-585	chrX	151707199	151708199	+	14.7	1000	Intergenic	Intergenic	-87868	NM_000808	2556	Hs.123024	NM_000808	ENSG00000011677	GABRA3	-	gamma-aminobutyric acid type A receptor alpha3 subunit	protein-coding	14.72	2.91	5.058419244	2.67E-05
chrX-587	chrX	152055585	152057093	+	23	1508	Intergenic	L1ME4a|LINE|L1	-26647	NM_001178106	7739	Hs.16622	NM_007150	ENSG00000147394	ZNF185	SCELL	zinc finger protein 185 (LIM domain)	protein-coding	23.04	4.37	5.272311213	2.46E-08
chrX-588	chrX	152221998	152223283	+	20.5	1285	Intergenic	Intergenic	-2126	NM_013364	29944	Hs.449627	NM_013364	ENSG00000183837	PNMA3	MA3|MA5	paraneoplastic Ma antigen 3	protein-coding	20.48	1.94	10.55670103	9.02E-12
chrX-591	chrX	152560120	152561120	+	14.1	1000	Intergenic	AluSp|SINE|Alu	-38993	NM_001080485	10838	Hs.348963	NM_020636	ENSG00000063587	ZNF275	-	zinc finger protein 275	protein-coding	14.08	1.94	7.257731959	6.14E-07
chrX-595	chrX	153077040	153078496	+	21.8	1456	"intron (NM_032512, intron 1 of 7)"	"intron (NM_032512, intron 1 of 7)"	17583	NM_001303515	57595	Hs.92732	NM_032512	ENSG00000067840	PDZD4	LNX5|LU1|PDZK4|PDZRN4L	PDZ domain containing 4	protein-coding	21.76	3.88	5.608247423	2.53E-08
chrX-596	chrX	153126265	153127265	+	14.1	1000	TTS (NM_001278116)	TTS (NM_001278116)	14634	NM_024003	3897	Hs.522818	NM_000425	ENSG00000198910	L1CAM	CAML1|CD171|HSAS|HSAS1|MASA|MIC5|N-CAM-L1|N-CAML1|NCAM-L1|S10|SPG1	L1 cell adhesion molecule	protein-coding	14.08	1.46	9.643835616	3.66E-08
chrX-60	chrX	39501303	39502303	+	18.6	1000	Intergenic	Intergenic	-18667	NR_037501	100500822		NR_037501	ENSG00000263730	MIR3937	-	microRNA 3937	ncRNA	18.56	1.94	9.567010309	9.53E-10
chrX-63	chrX	47589704	47590954	+	20.5	1250	"intron (NR_033924, intron 3 of 3)"	"intron (NR_033924, intron 3 of 3)"	23739	NR_033924	392459	Hs.562045	NR_033924	ENSG00000187893	CXXC1P1	CXorf25|NCRNA00236	CXXC finger protein 1 pseudogene 1	pseudo	20.48	4.85	4.222680412	2.52E-06
chrX-67	chrX	106241448	106243645	+	34.6	2197	"intron (NM_024657, intron 2 of 16)"	CpG	928	NM_024657	79710	Hs.496544	NM_024657	ENSG00000133131	MORC4	ZCW4|ZCWCC2|dJ75H8.2	MORC family CW-type zinc finger 4	protein-coding	34.56	5.82	5.93814433	6.75E-13
chrX-69	chrX	107682635	107684163	+	25	1528	promoter-TSS (NM_001847)	promoter-TSS (NM_001847)	325	NM_033380	1287	Hs.369089	NM_000495	ENSG00000188153	COL4A5	ASLN|ATS|CA54	collagen type IV alpha 5 chain	protein-coding	24.96	4.37	5.711670481	4.38E-09
chrX-75	chrX	135006358	135007358	+	18.6	1000	Intergenic	PRIMA41-int|LTR|ERV1	31073	NM_018666	55511	Hs.195292	NM_018666	ENSG00000181433	SAGE1	CT14|SAGE	sarcoma antigen 1	protein-coding	18.56	3.4	5.458823529	8.42E-07
chrX-78	chrX	152699938	152701221	+	22.4	1283	Intergenic	LTR38|LTR|ERV1	11366	NM_080701	11219	Hs.644635	NM_080699	ENSG00000183479	TREX2	-	three prime repair exonuclease 2	protein-coding	22.4	4.37	5.125858124	1.32E-07
chrX-79	chrX	152890129	152891731	+	28.8	1602	Intergenic	Intergenic	-16967	NM_001395	1852	Hs.144879	NM_001395	ENSG00000130829	DUSP9	MKP-4|MKP4	dual specificity phosphatase 9	protein-coding	28.8	2.91	9.896907216	7.24E-15
chrX-80	chrX	152920590	152921858	+	20.5	1268	Intergenic	L1MEd|LINE|L1	8567	NM_001318503	1852	Hs.144879	NM_001395	ENSG00000130829	DUSP9	MKP-4|MKP4	dual specificity phosphatase 9	protein-coding	20.48	4.85	4.222680412	2.52E-06
chrX-84	chrX	16216876	16217876	+	17.9	1000	Intergenic	Intergenic	31772	NM_001277307	645864	Hs.632792	NM_001277307	ENSG00000182798	MAGEB17	-	MAGE family member B17	protein-coding	17.92	3.88	4.618556701	3.85E-06
chrX-85	chrX	23357584	23359888	+	33.9	2304	"intron (NM_173495, intron 1 of 2)"	"intron (NM_173495, intron 1 of 2)"	5751	NM_173495	139411	Hs.319503	NM_173495	ENSG00000165186	PTCHD1	AUTSX4	patched domain containing 1	protein-coding	33.92	5.34	6.352059925	6.04E-13
chrX-88	chrX	40155675	40156675	+	17.9	1000	Intergenic	Intergenic	34005	NR_110386	101927476	Hs.522607	NR_110386	ENSG00000236393	LOC101927476	-	uncharacterized LOC101927476	ncRNA	17.92	3.88	4.618556701	3.85E-06
chrX-89	chrX	43421353	43422353	+	17.3	1000	Intergenic	Intergenic	-92302	NM_000240	4128	Hs.183109	NM_000240	ENSG00000189221	MAOA	BRNRS|MAO-A	monoamine oxidase A	protein-coding	17.28	2.91	5.93814433	8.60E-07
chrX-9	chrX	102611750	102612750	+	22.4	1000	"intron (NM_001006612, intron 2 of 2)"	"intron (NM_001006612, intron 2 of 2)"	870	NM_001006613	51186	Hs.533287	NM_016303	ENSG00000185222	TCEAL9	WBP5|WEX6	transcription elongation factor A like 9	protein-coding	22.4	2.43	9.218106996	2.49E-11
chrX-90	chrX	49133496	49134769	+	17.9	1273	"intron (NM_033215, intron 1 of 3)"	"intron (NM_033215, intron 1 of 3)"	7826	NM_001184745	89801	Hs.433652	NM_033215	ENSG00000049769	PPP1R3F	HB2E|LL0XNC01-7P3.1|R3F	protein phosphatase 1 regulatory subunit 3F	protein-coding	17.92	2.43	7.374485597	1.53E-08
chrX-92	chrX	53293867	53294867	+	17.3	1000	"intron (NM_001111125, intron 2 of 14)"	(TGAG)n|Simple_repeat|Simple_repeat	16429	NM_001243197	23096	Hs.496138	NM_015075	ENSG00000124313	IQSEC2	BRAG1|MRX1|MRX18|MRX78	IQ motif and Sec7 domain 2	protein-coding	17.28	2.43	7.111111111	1.14E-07
chrX-94	chrX	71129403	71132858	+	48	3455	"exon (NM_001013627, exon 1 of 8)"	"exon (NM_001013627, exon 1 of 8)"	192	NM_001013627	340527	Hs.397836	NM_001013627	ENSG00000204131	NHSL2	-	NHS like 2	protein-coding	48.01	8.74	5.493135011	6.98E-16
chrX-99	chrX	94038870	94039870	+	18.6	1000	Intergenic	L1PBa|LINE|L1	278855	NR_031667	100313772		NR_031667	ENSG00000221187	MIR548M	MIRN548M	microRNA 548m	ncRNA	18.56	1.94	9.567010309	9.53E-10
chrY-28	chrY	21154107	21155107	+	15.4	1000	promoter-TSS (NM_001291739)	promoter-TSS (NM_001291739)	-79	NM_001291739	100133941	Hs.644105	NM_013230	ENSG00000272398	CD24	CD24A	CD24 molecule	protein-coding	15.36	2.91	5.278350515	4.98E-06