{"text_format":"2","workbook":"xlsx","n_sheets":9,"sheets":["Overview","TP Mutations","TP Polymorphisms","FN Mutations","FN Polymorphisms","FP Mutations","FP Polymorphisms","TN Mutations Filter 2","TN Mutations Filter 1"],"not_rendered":{"charts":0,"images":0,"macros":0,"external_links":0,"defined_names":0,"comments":0,"pivot_tables":0},"unopened":[],"bounds":{"document_bytes":16777216,"sheet_cells":100000,"run_cost":"one","rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0,"cell_chars":16384,"cell_head_chars":4096},"cells_cut":0,"cells_raw":0,"read":"whole","date_system":"1900"}

{"sheet":"Overview","index":0,"n_rows":62,"n_cols":13,"rows_kept":62,"cut":false,"hidden":false,"merged":[[0,1,0,7],[13,1,13,7],[18,1,18,7],[23,1,23,7],[35,1,35,7],[48,1,48,7],[53,1,53,7],[58,1,58,7]]}
["tes set 4; n=22","1 tool, no filter (20, 50, 0.01)"]
[null,"Mutations (TP)","Polymorphisms (TP)","Mutations (FN)","Polymorphisms (FN)","No Mutations (FP_M)","No Mutations (FP_P)","No Mutations (TN2)","No Mutations (TN1)","Variants","Artifacts","sens","PPV"]
["GATK",51,109,0,3,3,0,41,16,{"$f":"SUM(B3:E3)","v":163},{"$f":"SUM(F3:I3)","v":60},{"$f":"J3/190","v":0.857894736842105},{"$f":"J3/(J3+K3)","v":0.730941704035874}]
["Platypus",57,111,0,5,2,1,375,19,{"$f":"SUM(B4:E4)","v":173},{"$f":"SUM(F4:I4)","v":397},{"$f":"J4/190","v":0.910526315789474},{"$f":"J4/(J4+K4)","v":0.303508771929825}]
["VarScan",42,89,3,5,1,1,84,29,{"$f":"SUM(B5:E5)","v":139},{"$f":"SUM(F5:I5)","v":115},{"$f":"J5/190","v":0.731578947368421},{"$f":"J5/(J5+K5)","v":0.547244094488189}]
["LoFreq",39,94,0,5,71,5,962,8037,{"$f":"SUM(B6:E6)","v":138},{"$f":"SUM(F6:I6)","v":9075},{"$f":"J6/190","v":0.726315789473684},{"$f":"J6/(J6+K6)","v":0.0149788342559427}]
["FreeBayes",63,109,3,5,77,11,4570,29051,{"$f":"SUM(B7:E7)","v":180},{"$f":"SUM(F7:I7)","v":33709},{"$f":"J7/190","v":0.947368421052632},{"$f":"J7/(J7+K7)","v":0.00531145799521969}]
["SNVer",47,70,2,2,40,1,1903,627,{"$f":"SUM(B8:E8)","v":121},{"$f":"SUM(F8:I8)","v":2571},{"$f":"J8/190","v":0.636842105263158},{"$f":"J8/(J8+K8)","v":0.0449479940564636}]
["SAMtools",31,95,2,5,0,1,48,67,{"$f":"SUM(B9:E9)","v":133},{"$f":"SUM(F9:I9)","v":116},{"$f":"J9/190","v":0.7},{"$f":"J9/(J9+K9)","v":0.534136546184739}]
["VarDict",57,110,6,0,73,0,1613,41,{"$f":"SUM(B10:E10)","v":173},{"$f":"SUM(F10:I10)","v":1727},{"$f":"J10/190","v":0.910526315789474},{"$f":"J10/(J10+K10)","v":0.0910526315789474}]
[null,65,111,8,6,79,15,4721,29264,{"$f":"SUM(B11:E11)","v":190},{"$f":"SUM(F11:I11)","v":34079}]
[]
[]
[null,"8 tools, no filter (20, 50, 0.01)"]
[null,"Variants","Artifacts","sens","PPV"]
[null,{"$f":"SUM(B11,C11,D11,5)","v":189},{"$f":"K11","v":34079},{"$f":"B16/B17","v":0.994736842105263},{"$f":"B16/(B16+C16)","v":0.00551534959729193}]
[null,{"$f":"J11","v":190}]
[]
[null,"8 tools, our filter; single sample info"]
[null,"Mutations","Artifacts","sens","PPV"]
[null,{"$f":"B11+C11","v":176},762,{"$f":"Overview!B21/B22","v":0.926315789473684},{"$f":"Overview!B21/(Overview!B21+Overview!C21)","v":0.187633262260128}]
[null,{"$f":"J11","v":190}]
[]
[null,"8 tools our filter"]
[null,"Variants","Artifacts","sens","PPV"]
[null,{"$f":"SUM(B11,C11)","v":176},{"$f":"SUM(F11,G11)","v":94},{"$f":"B26/B27","v":0.926315789473684},{"$f":"B26/(B26+C26)","v":0.651851851851852}]
[null,{"$f":"J11","v":190}]
{"$rows_empty":8}
["Mutations only","1 tool, no filter (20, 50, 0.01)"]
[null,"Mutations (TP)","Mutations (FN)","No Mutations (FP_M)","No Mutations (TN2)","No Mutations (TN1)","Variants","Artifacts","sens","PPV"]
["GATK",51,0,3,41,16,{"$f":"SUM(B38,C38)","v":51},{"$f":"SUM(D38,E38,F38)","v":60},{"$f":"G38/73","v":0.698630136986301},{"$f":"G38/(G38+H38)","v":0.45945945945946}]
["Platypus",57,0,2,375,19,{"$f":"SUM(B39,C39)","v":57},{"$f":"SUM(D39,E39,F39)","v":396},{"$f":"G39/73","v":0.780821917808219},{"$f":"G39/(G39+H39)","v":0.125827814569536}]
["VarScan",42,3,1,84,29,{"$f":"SUM(B40,C40)","v":45},{"$f":"SUM(D40,E40,F40)","v":114},{"$f":"G40/73","v":0.616438356164384},{"$f":"G40/(G40+H40)","v":0.283018867924528}]
["LoFreq",39,0,71,962,8037,{"$f":"SUM(B41,C41)","v":39},{"$f":"SUM(D41,E41,F41)","v":9070},{"$f":"G41/73","v":0.534246575342466},{"$f":"G41/(G41+H41)","v":0.00428147985508837}]
["FreeBayes",63,3,77,4570,29051,{"$f":"SUM(B42,C42)","v":66},{"$f":"SUM(D42,E42,F42)","v":33698},{"$f":"G42/73","v":0.904109589041096},{"$f":"G42/(G42+H42)","v":0.00195474469849544}]
["SNVer",47,2,40,1903,627,{"$f":"SUM(B43,C43)","v":49},{"$f":"SUM(D43,E43,F43)","v":2570},{"$f":"G43/73","v":0.671232876712329},{"$f":"G43/(G43+H43)","v":0.0187094310805651}]
["SAMtools",31,2,0,48,67,{"$f":"SUM(B44,C44)","v":33},{"$f":"SUM(D44,E44,F44)","v":115},{"$f":"G44/73","v":0.452054794520548},{"$f":"G44/(G44+H44)","v":0.222972972972973}]
["VarDict",57,6,73,1613,41,{"$f":"SUM(B45,C45)","v":63},{"$f":"SUM(D45,E45,F45)","v":1727},{"$f":"G45/73","v":0.863013698630137},{"$f":"G45/(G45+H45)","v":0.035195530726257}]
[null,65,8,79,4721,29264,{"$f":"SUM(B46,C46)","v":73},{"$f":"SUM(D46,E46,F46)","v":34064}]
[]
[]
[null,"8 tools, no filter (20, 50, 0.01)"]
[null,"Variants","Artifacts","sens","PPV"]
[null,{"$f":"SUM(B46,C46)","v":73},{"$f":"H46","v":34064},{"$f":"B51/B52","v":1},{"$f":"B51/(B51+C51)","v":0.00213844215953364}]
[null,{"$f":"G46","v":73}]
[]
[null,"8 tools, our filter; single sample info"]
[null,"Mutations","Artifacts","sens","PPV"]
[null,65,871,{"$f":"Overview!B56/B57","v":0.89041095890411},{"$f":"Overview!B56/(Overview!B56+Overview!C56)","v":0.0694444444444444}]
[null,{"$f":"G46","v":73}]
[]
[null,"8 tools our filter"]
[null,"Variants","Artifacts","sens","PPV"]
[null,{"$f":"SUM(B46)","v":65},{"$f":"SUM(D46)","v":79},{"$f":"B61/B62","v":0.89041095890411},{"$f":"B61/(B61+C61)","v":0.451388888888889}]
[null,{"$f":"G46","v":73}]

{"sheet":"TP Mutations","index":1,"n_rows":67,"n_cols":50,"rows_kept":67,"cut":false,"hidden":false,"merged":[]}
["True because...","Sample","Chr","Pos","Ref","Alt","Gene","ENST","Type","Mutation","Nr_Ref","Nr_Alt","DP","VAF","GATK","Platypus","VarScan","LoFreq","FreeBayes","SNVer","SAMtools","VarDict","Called","ESP6500","G1000","Cosmic","Cosmic_location","Cosmic_occurence","dbSNP_SNPs","dbSNP_SNVs","PM_flag","ExAC","ClinVar_clinical","ClinVar_noimpact","provean_score","prediction","BQ_Ref","BQ_Alt","Nr_Ref_fwd","Nr_Alt_fwd","DP_fwd","VAF_fwd","Nr_Ref_rev","Nr_Alt_rev","DP_rev","VAF_rev","strandbias","nr_samples","nr_samples_similar","Category"]
["Expert, Cosmic","UPN_Te4_001",1,43815009,"G","T","MPL","ENST00000372470","missense_variant","tGg/tTg|p.Trp515Leu/c.1544G>T",6360,6238,12748,0.489331659868215,1,1,1,0,1,0,1,1,6,"NO","NO","COSM18918, COSM3719407","haematopoietic_and_lymphoid_tissue",268,"NO","NO","NO",1.647E-005,"NO","NO",-1.391,"Tolerated",33.39,32.15,6331,6238,12719,0.490447362214011,29,0,29,0,3.74559190348566E-009,1,1,"Probably True (-2)"]
["Expert, prediction","UPN_Te4_006",1,115256536,"C","T","NRAS","ENST00000369535","missense_variant","Gct/Act|p.Ala59Thr/c.175G>A",318,148,466,0.317596566523605,1,0,1,1,1,1,1,1,7,"NO","NO","COSM578","autonomic_ganglia, haematopoietic_and_lymphoid_tissue, pancreas","1, 1, 3","NO","NO","NO","NO","NO","NO",-3.949,"Deleterious",31.55,32.41,318,146,464,0.314655172413793,0,2,2,1,0.100401495223591,1,1,"Probably True (-6)"]
["Hotspot, Expert, dbSNP, Cosmic, prediction, bq","UPN_Te4_007",1,115258744,"C","T","NRAS","ENST00000369535","missense_variant","gGt/gAt|p.Gly13Asp/c.38G>A",15301,14003,29382,0.476584303314955,1,1,1,1,1,0,1,1,7,"NO","NO","COSM573","endometrium, haematopoietic_and_lymphoid_tissue, large_intestine, NS, skin, thyroid, upper_aerodigestive_tract","1, 217, 10, 278, 26, 1, 2","NO","rs121434596","YES",8.236E-006,"NO","NO",-5.441,"Deleterious",35.06,34.64,15301,14003,29382,0.476584303314955,0,0,0,"NA",1,2,2,"Hotspot (-9)"]
["Hotspot, Expert, Illumina validated, Ion Torrent validated, dbSNP, Cosmic, prediction","UPN_Te4_006",1,115258745,"C","A","NRAS","ENST00000369535","missense_variant","Ggt/Tgt|p.Gly13Cys/c.37G>T",21311,1893,23246,0.0814333648799793,0,0,0,1,1,0,0,0,2,"NO","NO","COSM570","haematopoietic_and_lymphoid_tissue, large_intestine, skin, thyroid","26, 2, 4, 2","NO","rs121434595","YES","NO","NO","NO",-7.663,"Deleterious",33.7,30.09,21311,1893,23246,0.0814333648799793,0,0,0,"NA",1,2,2,"Hotspot (-4)"]
["Hotspot, Expert, Illumina validated, Ion Torrent validated, dbSNP, Cosmic, prediction, bq","UPN_Te4_002",1,115258747,"C","T","NRAS","ENST00000369535","missense_variant","gGt/gAt|p.Gly12Asp/c.35G>A",23589,1115,24859,0.0448529707550585,0,0,0,1,1,0,0,1,3,0.0116,"NO","COSM564","biliary_tract, central_nervous_system, endometrium, genital_tract, haematopoietic_and_lymphoid_tissue, kidney, large_intestine, lung, NS, ovary, pancreas, skin, soft_tissue, testis, thyroid, upper_aerodigestive_tract","4, 5, 4, 2, 381, 1, 60, 1, 570, 1, 1, 61, 2, 3, 2, 1","NO","rs121913237","YES",1.647E-005,"NO","NO",-5.5,"Deleterious",34.57,34.33,23589,1115,24859,0.0448529707550585,0,0,0,"NA",1,1,1,"Hotspot (-6)"]
["Hotspot, Expert, dbSNP, Cosmic, prediction, bq","UPN_Te4_003",1,115258748,"C","T","NRAS","ENST00000369535","missense_variant","Ggt/Agt|p.Gly12Ser/c.34G>A",9528,8663,18256,0.474528921998247,1,1,1,1,1,0,1,1,7,"NO","NO","COSM563","haematopoietic_and_lymphoid_tissue, large_intestine, lung, ovary, prostate, skin, soft_tissue, upper_aerodigestive_tract","110, 6, 3, 1, 6, 13, 1, 21","NO","rs121913250","YES","NO","NO","NO",-4.621,"Deleterious",34.77,34.05,9528,8663,18256,0.474528921998247,0,0,0,"NA",1,3,3,"Hotspot (-9)"]
["Hotspot, Expert, prediction, bq","UPN_Te4_006",2,25457242,"C","A","DNMT3A","ENST00000264709","missense_variant","cGc/cTc|p.Arg882Leu/c.2645G>T",7673,6576,14301,0.459827984057059,1,1,1,1,1,1,1,1,8,"NO","NO","COSM1583129","haematopoietic_and_lymphoid_tissue",2,"NO","NO","NO",0.000593,"NO","NO",-6.061,"Deleterious",34.22,33.62,3859,3314,7191,0.460853845084133,3814,3262,7110,0.458790436005626,0.906365105558377,1,1,"Hotspot (-9)"]
["Expert, prediction, bq","UPN_Te4_004",2,25462068,"A","G","DNMT3A","ENST00000264709","missense_variant","aTt/aCt|p.Ile780Thr/c.2339T>C",9442,6654,16207,0.410563336829765,1,1,1,1,1,1,1,1,8,0.0116,"NO","COSM1583121","haematopoietic_and_lymphoid_tissue",2,"NO","rs370751539","NO","NO","NO","NO",-4.232,"Deleterious",27.69,33.91,4770,3354,8155,0.411281422440221,4672,3300,8052,0.409836065573771,0.898106744227785,1,1,"Probably True (-6)"]
["Hotspot, Expert, Cosmic, prediction, bq","UPN_Te4_015",2,198266834,"T","C","SF3B1","ENST00000335508","missense_variant","Aaa/Gaa|p.Lys700Glu/c.2098A>G",10918,5155,16098,0.320226115045347,1,1,1,1,1,0,1,1,7,"NO",0,"COSM84677","breast, central_nervous_system, eye, haematopoietic_and_lymphoid_tissue, kidney, NS, oesophagus, pancreas, prostate","14, 2, 1, 395, 1, 515, 1, 13, 4","NO","NO","NO",0.0002306,"NO","NO",-3.819,"Deleterious",35.33,34.76,0,0,0,"NA",10918,5155,16098,0.320226115045347,1,1,1,"Hotspot (-9)"]
["Expert, bq","UPN_Te4_021",3,128205184,"CG","C","GATA2","ENST00000341105","frameshift_variant","cgc/|p.Arg86fs/c.256delC",5720,4007,9780,0.409713701431493,1,1,0,0,1,1,0,1,5,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.15,"NA",3630,3958,7629,0.51880980469262,2090,49,2151,0.0227801022780102,2,2,2,"Probably True (-3)"]
["Expert, Cosmic, bq","UPN_Te4_013",4,106157845,"C","T","TET2","ENST00000380013","stop_gained","Cag/Tag|p.Gln916*/c.2746C>T",3324,3042,6387,0.47627994363551,1,1,1,1,1,1,1,1,8,"NO","NO","COSM43417, COSM3733079","haematopoietic_and_lymphoid_tissue",26,"NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.82,34.76,3312,3034,6367,0.476519553950055,12,8,20,0.4,0.511218732216762,1,1,"Probably True (-5)"]
["Expert, bq","UPN_Te4_014",4,106157950,"GCT","G","TET2","ENST00000380013","frameshift_variant","cta/|p.Leu952fs/c.2854_2855delCT",31742,4284,36121,0.118601367625481,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.15,"NA",20537,8,20607,0.000388217595962537,11205,4276,15514,0.275622018821709,2,1,1,"Probably True (-1)"]
["Expert, bq","UPN_Te4_004",4,106158187,"C","T","TET2","ENST00000380013","stop_gained","Cag/Tag|p.Gln1030*/c.3088C>T",12812,8627,21493,0.401386497929558,1,1,1,0,1,1,1,1,7,"NO","NO","COSM4766113","haematopoietic_and_lymphoid_tissue",1,"NO","NO","NO",8.237E-006,"NO","NO","NA","NA",35.3,35.04,12715,8615,21384,0.402871305649083,97,12,109,0.110091743119266,2.10345801536942E-011,1,1,"Probably True (-3)"]
["Expert, prediction, bq","UPN_Te4_007",4,106164020,"T","A","TET2","ENST00000380013","missense_variant","aTt/aAt|p.Ile1177Asn/c.3530T>A",15502,15354,30959,0.495946251493911,1,1,1,1,1,0,1,1,7,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.148,"Deleterious",35.24,33.75,15502,15354,30959,0.495946251493911,0,0,0,"NA",1,1,1,"Probably True (-6)"]
["Expert, prediction","UPN_Te4_019",4,106180871,"T","C","TET2","ENST00000380013","missense_variant","tTt/tCt|p.Phe1300Ser/c.3899T>C",9183,4555,13760,0.331031976744186,1,1,1,1,1,1,1,1,8,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-6.549,"Deleterious",34.43,32.51,4613,2299,6925,0.331985559566787,4570,2256,6835,0.330065837600585,0.799718937332765,1,1,"Probably True (-6)"]
["Expert, prediction","UPN_Te4_003",4,106190882,"A","C","TET2","ENST00000380013","missense_variant","aAc/aCc|p.Asn1387Thr/c.4160A>C",6225,1503,7808,0.19249487704918,1,1,0,1,1,1,1,1,7,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.776,"Deleterious",34.28,32.43,3147,740,3916,0.188968335035751,3078,763,3892,0.196043165467626,0.372959633605203,1,1,"Probably True (-6)"]
["Expert, bq","UPN_Te4_003",4,106196825,"A","T","TET2","ENST00000380013","stop_gained","Aaa/Taa|p.Lys1720*/c.5158A>T",13005,13374,26457,0.505499489738066,1,1,1,1,1,1,1,1,8,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.26,35.14,7549,7628,15222,0.501116804624885,5456,5746,11235,0.511437472185136,0.097560957349364,2,2,"Probably True (-5)"]
["Hotspot, Expert, bq","UPN_Te4_002",5,170837543,"C","CTCTG","NPM1","ENST00000517671","frameshift_variant","tgg/tgTCTGg|p.Trp288fs/c.860_863dupTCTG",9660,3297,10791,0.305532388101195,1,1,1,0,0,1,0,1,5,"NO","NO","NO","NA","NA","NO","NO","NO",8.286E-006,"NO","NO","NA","NA",19.53,"NA",9660,3297,10791,0.305532388101195,0,0,0,"NA",1,2,4,"Hotspot (-4)"]
["Hotspot, Expert, bq","UPN_Te4_010",5,170837543,"C","CTCTG","NPM1","ENST00000517671","frameshift_variant","tgg/tgTCTGg|p.Trp288fs/c.860_863dupTCTG",12643,2889,14137,0.204357360118837,1,1,1,0,1,1,0,1,6,"NO","NO","NO","NA","NA","NO","NO","NO",8.286E-006,"NO","NO","NA","NA",19.59,"NA",12643,2889,14137,0.204357360118837,0,0,0,"NA",1,2,4,"Hotspot (-5)"]
["Hotspot, Expert, bq","UPN_Te4_006",5,170837545,"C","CTGCT","NPM1","ENST00000517671","frameshift_variant","tgg/tgCTTGg|p.Trp288fs/c.863_864insCTTG",10259,4663,11254,0.414341567442687,1,1,1,0,1,1,0,1,6,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",20.41,"NA",10259,4663,11254,0.414341567442687,0,0,0,"NA",1,1,1,"Hotspot (-6)"]
["Expert, bq","UPN_Te4_002",7,50444240,"TTAAAG","T","IKZF1","ENST00000331340","frameshift_variant","aaagta/|p.Lys58fs/c.173_177delAAGTA",9603,8082,17717,0.456172038155444,1,1,1,0,1,1,0,1,6,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.58,"NA",9603,8082,17717,0.456172038155444,0,0,0,"NA",1,1,1,"Probably True (-3)"]
["Expert, Illumina validated","UPN_Te4_010",7,101747709,"A","G","CUX1","ENST00000292535","missense_variant","aAg/aGg|p.Lys167Arg/c.500A>G",239,29,271,0.107011070110701,0,0,0,1,1,1,1,1,5,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.47,"Tolerated",32.85,30.07,116,14,131,0.106870229007634,123,15,140,0.107142857142857,1,1,1,"Probably True (-3)"]
["Expert, bq","UPN_Te4_007",7,148525838,"G","A","EZH2","ENST00000320356","stop_gained","Cga/Tga|p.Arg207*/c.619C>T",7099,5361,12470,0.429911788291901,1,1,1,1,1,0,1,1,7,"NO","NO","COSM52996","haematopoietic_and_lymphoid_tissue",1,"NO","NO","NO","NO","NO","NO","NA","NA",35.13,35.59,7099,5361,12470,0.429911788291901,0,0,0,"NA",1,1,1,"Probably True (-5)"]
["Expert, bq","UPN_Te4_008",7,148525850,"G","C","EZH2","ENST00000320356","missense_variant","Ctg/Gtg|p.Leu203Val/c.607C>G",5035,4706,9764,0.481974600573535,1,1,1,1,1,0,1,1,7,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.508,"Tolerated",35.33,35.49,5035,4706,9764,0.481974600573535,0,0,0,"NA",1,1,1,"Probably True (-5)"]
["Expert, prediction","UPN_Te4_007",9,5073732,"T","C","JAK2","ENST00000381652","missense_variant","cTt/cCt|p.Leu604Pro/c.1811T>C",7913,8464,16594,0.510063878510305,1,1,1,1,1,0,1,1,7,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.423,"Deleterious",34.82,29.41,7913,8464,16594,0.510063878510305,0,0,0,"NA",1,1,1,"Probably True (-6)"]
["Hotspot, Expert, dbSNP, Cosmic, prediction","UPN_Te4_016",9,5073770,"G","T","JAK2","ENST00000381652","missense_variant","Gtc/Ttc|p.Val617Phe/c.1849G>T",19790,1371,21207,0.0646484651294384,0,0,0,1,1,1,0,1,4,0.0233,"NO","COSM12600","central_nervous_system, haematopoietic_and_lymphoid_tissue, lung","1, 37620, 3","NO","rs77375493","YES",0.0006919,"NO","NO",-3.94,"Deleterious",32.57,32.48,9858,724,10606,0.0682632472185555,9932,647,10601,0.0610319781152721,0.0337683213429944,1,1,"Hotspot (-7)"]
["Expert, Illumina validated, Ion Torrent validated, bq","UPN_Te4_010",11,32417924,"C","CAA","WT1","ENST00000332351","frameshift_variant","ccg/ccTTg|p.Thr377fs/c.1127_1128insTT",18668,3106,18737,0.165768265997758,1,1,0,0,1,1,0,1,5,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.76,"NA",1,0,1,0,18667,3106,18736,0.165777113578138,1,1,1,"Probably True (-2)"]
["Expert, Cosmic, prediction, bq","UPN_Te4_010",11,119148991,"G","A","CBL","ENST00000264033","missense_variant","tGt/tAt|p.Cys404Tyr/c.1211G>A",22201,4888,27124,0.180209408641793,0,1,0,0,1,1,0,0,3,"NO","NO","COSM34068","haematopoietic_and_lymphoid_tissue",13,"NO","rs192712314","NO",8.236E-006,"NO","NO",-10.273,"Deleterious",35.32,35.5,10799,13,10825,0.00120092378752887,11402,4875,16299,0.29909810417817,2,1,1,"Probably True (-2)"]
["Expert, Illumina validated, Ion Torrent validated, prediction","UPN_Te4_011",12,25398278,"A","C","KRAS","ENST00000256078","missense_variant","gTa/gGa|p.Val14Gly/c.41T>G",32370,1717,34245,0.0501387063804935,0,0,0,1,1,1,0,1,4,"NO","NO","COSM249887","large_intestine",8,"NO","NO","NO","NO","NO","NO",-5.885,"Deleterious",32.72,32.25,16355,881,17300,0.0509248554913295,16015,836,16945,0.0493360873413986,0.535839610678528,1,1,"Probably True (-4)"]
["Hotspot, Expert, Illumina validated, Ion Torrent validated, dbSNP, Cosmic, prediction, bq","UPN_Te4_011",12,25398281,"C","T","KRAS","ENST00000256078","missense_variant","gGc/gAc|p.Gly13Asp/c.38G>A",32285,1766,34247,0.0515665605746489,0,0,0,1,1,1,0,0,3,"NO","NO","COSM1140132, COSM532","biliary_tract, cervix, endometrium, haematopoietic_and_lymphoid_tissue, large_intestine, liver, lung, oesophagus, pancreas, peritoneum, stomach, upper_aerodigestive_tract, bone, breast, central_nervous_system, gastrointestinal_tract_(site_indeterminate), genital_tract, ovary, pleura, prostate, skin, small_intestine, soft_tissue, thyroid, urinary_tract","25, 7, 71, 150, 4245, 5, 164, 6, 39, 12, 64, 6, 1, 18, 1, 23, 1, 36, 2, 23, 3, 19, 34, 23, 5","NO","rs112445441","YES","NO","NO","NO",-5.483,"Deleterious",31.83,33.63,16355,887,17298,0.0512776043473234,15930,879,16949,0.0518614667532008,0.73226006620752,1,1,"Hotspot (-4)"]
["Expert, prediction, bq","UPN_Te4_002",12,112888195,"T","C","PTPN11","ENST00000351677","missense_variant","Ttt/Ctt|p.Phe71Leu/c.211T>C",37881,5240,43212,0.121262612237341,1,1,0,1,1,1,0,1,6,"NO","NO","COSM13039","haematopoietic_and_lymphoid_tissue, large_intestine","4, 1","NO","NO","NO","NO","NO","NO",-5.671,"Deleterious",34.73,34.83,19084,2641,21771,0.121308162234165,18797,2599,21441,0.121216361177184,0.976485447073985,1,1,"Probably True (-6)"]
["Hotspot, Expert, Cosmic, prediction, bq","UPN_Te4_002",13,28592642,"C","A","FLT3","ENST00000241453","missense_variant","Gat/Tat|p.Asp835Tyr/c.2503G>T",22173,7383,29592,0.249493106244931,1,1,1,1,1,0,0,1,6,"NO","NO","COSM783","haematopoietic_and_lymphoid_tissue",216,"NO","NO","NO","NO","NO","NO",-7.899,"Deleterious",34.78,35.02,22137,7383,29556,0.249796995533902,36,0,36,0,5.30251628334607E-005,1,1,"Hotspot (-8)"]
["Hotspot, Expert, dbSNP, Cosmic, prediction","UPN_Te4_002",15,90631934,"C","T","IDH2","ENST00000330062","missense_variant","cGg/cAg|p.Arg140Gln/c.419G>A",15157,13737,28966,0.474245667334116,1,1,1,1,1,1,1,1,8,"NO","NO","COSM41590","haematopoietic_and_lymphoid_tissue",489,"NO","rs121913502","YES",0.0001071,"NO","NO",-3.75,"Deleterious",31.65,32.95,7606,6875,14516,0.473615321025076,7551,6862,14450,0.474878892733564,0.82290041066576,2,2,"Hotspot (-9)"]
["Hotspot, Expert, dbSNP, Cosmic, prediction","UPN_Te4_008",15,90631934,"C","T","IDH2","ENST00000330062","missense_variant","cGg/cAg|p.Arg140Gln/c.419G>A",24169,13425,37709,0.356015805245432,1,1,1,1,1,1,1,1,8,"NO","NO","COSM41590","haematopoietic_and_lymphoid_tissue",489,"NO","rs121913502","YES",0.0001071,"NO","NO",-3.75,"Deleterious",31.65,32.96,12126,6730,18906,0.35597164921189,12043,6695,18803,0.35606020315907,0.939940413655916,2,2,"Hotspot (-9)"]
["Hotspot, Expert, prediction","UPN_Te4_006",15,90631935,"G","A","IDH2","ENST00000330062","missense_variant","Cgg/Tgg|p.Arg140Trp/c.418C>T",15087,13497,28705,0.470196829820589,1,1,1,1,1,1,1,1,8,"NO","NO","COSM41877","haematopoietic_and_lymphoid_tissue, large_intestine","10, 2","NO","NO","NO","NO","NO","NO",-7.5,"Deleterious",33.56,32.23,7592,6768,14400,0.47,7495,6729,14305,0.470394966794827,0.767086994579287,1,1,"Hotspot (-9)"]
["Expert, prediction, bq","UPN_Te4_022",17,7577126,"T","G","TP53","ENST00000269305","missense_variant","gAg/gCg|p.Glu271Ala/c.812A>C",13379,4605,18077,0.254743596835758,1,1,0,0,1,1,0,1,5,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.626,"Deleterious",35.28,34.73,7589,8,7645,0.00104643557880968,5790,4597,10432,0.440663343558282,2,2,2,"Probably True (-4)"]
["Expert, bq","UPN_Te4_022",17,7577132,"C","A","TP53","ENST00000269305","missense_variant","aGc/aTc|p.Ser269Ile/c.806G>T",13420,4620,18082,0.255502709877226,1,1,0,0,1,1,0,0,4,"NO","NO","COSM4302129","central_nervous_system",2,"NO","NO","NO","NO","NO","NO",-1.533,"Tolerated",35.44,35.19,7633,6,7649,0.000784416263563865,5787,4614,10433,0.442250551135819,2,1,1,"Probably True (-2)"]
["Expert, bq","UPN_Te4_022",17,7577136,"T","A","TP53","ENST00000269305","missense_variant","Aac/Tac|p.Asn268Tyr/c.802A>T",13408,4624,18083,0.255709782668805,1,1,0,0,1,1,0,1,5,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.133,"Tolerated",35.39,35.28,7622,6,7649,0.000784416263563865,5786,4618,10434,0.442591527697911,2,2,2,"Probably True (-3)"]
["Expert, Cosmic, prediction, bq","UPN_Te4_004",17,7577517,"A","C","TP53","ENST00000269305","missense_variant","aTc/aGc|p.Ile255Ser/c.764T>G",5786,15944,21792,0.731644640234949,1,1,1,1,1,0,1,1,7,"NO","NO","COSM3403258, COSM1637748, COSM437489, COSM10788, COSM437488","bone, breast, central_nervous_system, oesophagus, endometrium, lung, ovary, upper_aerodigestive_tract, urinary_tract","5, 5, 9, 10, 1, 1, 1, 2, 1","NO","NO","NO","NO","NO","NO",-4.534,"Deleterious",35.42,35.03,5786,15944,21792,0.731644640234949,0,0,0,"NA",1,1,1,"Probably True (-6)"]
["Expert, Cosmic, prediction, bq","UPN_Te4_009",17,7579355,"A","C","TP53","ENST00000269305","missense_variant","cTg/cGg|p.Leu111Arg/c.332T>G",1473,395,1874,0.210779082177161,1,1,1,1,1,0,0,1,6,"NO","NO","COSM307283, COSM307284, COSM1646884, COSM3742473, COSM44570","haematopoietic_and_lymphoid_tissue, liver, lung, breast, central_nervous_system, large_intestine","3, 13, 5, 1, 1, 1","NO","NO","NO","NO","NO","NO",-4.647,"Deleterious",34.04,34.86,1473,395,1874,0.210779082177161,0,0,0,"NA",1,1,1,"Probably True (-6)"]
["Hotspot, Expert, Cosmic, prediction, bq","UPN_Te4_001",17,74732959,"G","C","SRSF2","ENST00000392485","missense_variant","cCc/cGc|p.Pro95Arg/c.284C>G",4736,3311,8060,0.410794044665012,1,1,1,1,1,1,1,1,8,"NO","NO","COSM211661","haematopoietic_and_lymphoid_tissue",55,"NO","NO","NO","NO","NO","NO",-4.575,"Deleterious",34.21,34.12,2384,1671,4060,0.411576354679803,2352,1640,4000,0.41,0.909837178897392,1,3,"Hotspot (-9)"]
["Hotspot, Expert, Cosmic, prediction","UPN_Te4_010",17,74732959,"G","A","SRSF2","ENST00000392485","missense_variant","cCc/cTc|p.Pro95Leu/c.284C>T",3489,2053,5555,0.36957695769577,1,1,1,1,1,1,1,1,8,"NO","NO","COSM146288","haematopoietic_and_lymphoid_tissue",93,"NO","NO","NO","NO","NO","NO",-5.208,"Deleterious",35.14,28.95,1749,1028,2786,0.368987796123475,1740,1025,2769,0.370169736366919,0.977812242886788,2,3,"Hotspot (-9)"]
["Hotspot, Expert, Illumina validated, Cosmic, prediction","UPN_Te4_011",17,74732959,"G","A","SRSF2","ENST00000392485","missense_variant","cCc/cTc|p.Pro95Leu/c.284C>T",9047,549,9613,0.0571101633205035,0,0,0,1,1,1,0,1,4,"NO","NO","COSM146288","haematopoietic_and_lymphoid_tissue",93,"NO","NO","NO","NO","NO","NO",-5.208,"Deleterious",34.23,29.9,4551,276,4834,0.0570955730244104,4496,273,4779,0.0571249215317012,1,2,3,"Hotspot (-7)"]
["Expert, bq","UPN_Te4_013",19,13054564,"AGCAGAGGCTTAAGGAGGAGGAAGAAGACAAGAAACGCAAAGAGGAGGAGGAG","A","CALR","ENST00000316448","frameshift_variant","cttaaggaggaggaagaagacaagaaacgcaaagaggaggaggaggcagaggac/|p.Leu367fs/c.1099_1150delCTTAAGGAGGAGGAAGAAGACAAGAAACGCAAAGAGGAGGAGGAGGCAGAGG",517,715,1234,0.579416531604538,1,1,0,0,1,1,0,1,5,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.25,"NA",517,715,1234,0.579416531604538,0,0,0,"NA",1,1,1,"Probably True (-2)"]
["Expert, bq","UPN_Te4_014",19,13054574,"TAAGGAGGAGGAAGAAGACAAGAAACGCAAAGAGGAGGAGGAGGCAGAGGACA","T","CALR","ENST00000316448","frameshift_variant","aaggaggaggaagaagacaagaaacgcaaagaggaggaggaggcagaggacaag/|p.Lys368fs/c.1103_1154delAGGAGGAGGAAGAAGACAAGAAACGCAAAGAGGAGGAGGAGGCAGAGGACAA",2101,2578,4699,0.548627367525005,1,1,1,0,1,1,0,1,6,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",31.25,"NA",2101,2578,4699,0.548627367525005,0,0,0,"NA",1,1,1,"Probably True (-3)"]
["Expert, bq","UPN_Te4_020",19,13054582,"AGGAAGAAGACAAGAAACGCAAAGAGGAGGAG","A","CALR","ENST00000316448","frameshift_variant","gaagaagacaagaaacgcaaagaggaggaggag/|p.Glu371fs/c.1111_1141delGAAGAAGACAAGAAACGCAAAGAGGAGGAGG",1650,1968,3621,0.543496271748136,1,1,0,0,1,1,0,1,5,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.29,"NA",1649,1968,3620,0.543646408839779,1,0,1,0,0.456053067993367,1,1,"Probably True (-2)"]
["Expert, bq","UPN_Te4_015",19,13054591,"A","T","CALR","ENST00000316448","missense_variant","gAc/gTc|p.Asp373Val/c.1118A>T",1112,1284,2407,0.533444121312838,1,1,1,1,1,0,1,1,7,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.278,"Tolerated",26.37,33.39,1112,1284,2407,0.533444121312838,0,0,0,"NA",1,1,1,"Probably True (-5)"]
["Expert, bq","UPN_Te4_015",19,13054595,"GAAACGCAAAGAGGAGGAGGAGGCAGAGGACA","G","CALR","ENST00000316448","frameshift_variant","aaacgcaaagaggaggaggaggcagaggacaag/|p.Lys375fs/c.1124_1154delAACGCAAAGAGGAGGAGGAGGCAGAGGACAA",1119,1276,2404,0.530782029950083,1,1,0,0,1,1,0,1,5,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",27.59,"NA",1119,1276,2404,0.530782029950083,0,0,0,"NA",1,1,1,"Probably True (-2)"]
["Expert, prediction, bq","UPN_Te4_019",19,13054599,"C","CGCCTTT","CALR","ENST00000316448","inframe_insertion","aaa/CTTTGCaaa|p.Arg376_Lys377insLeuCys/c.1128_1129insCTTTGC",1661,528,1665,0.317117117117117,0,1,1,0,1,1,0,0,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-4.773,"Deleterious",33.45,"NA",1661,528,1665,0.317117117117117,0,0,0,"NA",1,1,1,"Probably True (-2)"]
["Expert, prediction","UPN_Te4_005",19,33792350,"A","T","CEBPA","ENST00000498907","missense_variant","cTg/cAg|p.Leu324Gln/c.971T>A",17598,15534,33584,0.462541686517389,1,1,1,1,1,1,1,1,8,"NO","NO","COSM18613","haematopoietic_and_lymphoid_tissue",2,"NO","NO","NO","NO","NO","NO",-5.886,"Deleterious",28.86,27.72,8849,7706,16866,0.456895529467568,8749,7828,16718,0.468237827491327,0.221707278595923,2,2,"Probably True (-6)"]
["Expert, prediction","UPN_Te4_012",19,33792350,"A","T","CEBPA","ENST00000498907","missense_variant","cTg/cAg|p.Leu324Gln/c.971T>A",8088,6327,14525,0.435593803786575,1,1,1,1,1,1,1,1,8,"NO","NO","COSM18613","haematopoietic_and_lymphoid_tissue",2,"NO","NO","NO","NO","NO","NO",-5.886,"Deleterious",31.76,29.46,4068,3184,7292,0.436642896324739,4020,3143,7233,0.434536153739804,0.98660900442334,2,2,"Probably True (-6)"]
["Expert, prediction, bq","UPN_Te4_005",19,33792375,"C","CCAG","CEBPA","ENST00000498907","inframe_insertion","ctg/ctgCTG|p.Leu315dup/c.943_945dupCTG",16664,7196,16722,0.430331300083722,1,1,1,0,1,1,1,1,7,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-9.471,"Deleterious",35.17,"NA",0,0,0,"NA",16664,7196,16722,0.430331300083722,1,2,2,"Probably True (-4)"]
["Expert, prediction, bq","UPN_Te4_012",19,33792375,"C","CCAG","CEBPA","ENST00000498907","inframe_insertion","ctg/ctgCTG|p.Leu315dup/c.943_945dupCTG",7230,3292,7241,0.454633337936749,1,1,0,0,1,1,0,1,5,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-9.471,"Deleterious",35.08,"NA",0,0,0,"NA",7230,3292,7241,0.454633337936749,1,2,2,"Probably True (-3)"]
["Hotspot, Expert, bq","UPN_Te4_008",20,31022402,"TCACCACTGCCATAGAGAGGCGGC","T","ASXL1","ENST00000375687","frameshift_variant","agagaggcggccaccactgccatc/|p.Glu635fs/c.1900_1922delAGAGAGGCGGCCACCACTGCCAT",2008,187,2204,0.0848457350272232,0,1,1,0,1,1,0,1,5,"NO","NO","NO","NA","NA","NO","NO","NO",0.0001403,"NO","NO","NA","NA",32.6,"NA",1232,0,1234,0,776,187,970,0.192783505154639,2,1,1,"Hotspot (-6)"]
["Hotspot, Expert, bq","UPN_Te4_003",20,31022441,"A","AG","ASXL1","ENST00000375687","frameshift_variant","ggt/ggGt|p.Gly646fs/c.1934dupG",9409,3765,9575,0.393211488250653,1,1,1,0,1,1,0,1,6,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.86,"NA",8659,3525,8710,0.404707233065442,750,240,865,0.277456647398844,0.0016444157660573,42,86,"Hotspot (-2)"]
["Hotspot, Expert, bq","UPN_Te4_007",20,31022441,"A","AG","ASXL1","ENST00000375687","frameshift_variant","ggt/ggGt|p.Gly646fs/c.1934dupG",14446,5748,14702,0.390967215344851,1,1,1,0,1,1,0,1,6,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.86,"NA",13274,5382,13344,0.403327338129496,1172,366,1358,0.269513991163476,1.9895385286395E-005,42,86,"Hotspot (-2)"]
["Expert, bq","UPN_Te4_014",20,31022749,"AT","A","ASXL1","ENST00000375687","frameshift_variant","gat/|p.Asp745fs/c.2235delT",18930,4449,23512,0.189222524668255,1,1,1,0,1,1,0,0,5,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.6,"NA",11464,161,11693,0.0137689215770119,7466,4288,11819,0.362805651916406,2,1,1,"Probably True (-3)"]
["Hotspot, Expert, dbSNP, Cosmic, prediction, bq","UPN_Te4_007",21,36231782,"C","T","RUNX1","ENST00000437180","missense_variant","cGa/cAa|p.Arg201Gln/c.602G>A",8340,7967,16337,0.487666034155598,1,1,1,1,1,0,1,0,6,"NO","NO","COSM24805","breast, haematopoietic_and_lymphoid_tissue, oesophagus","1, 13, 1","NO","rs74315450","YES","NO","NO","NO",-3.686,"Deleterious",35.45,35.05,8340,7967,16337,0.487666034155598,0,0,0,"NA",1,1,1,"Hotspot (-7)"]
["Expert, bq","UPN_Te4_003",21,36252874,"A","T","RUNX1","ENST00000437180","missense_variant","tTt/tAt|p.Phe163Tyr/c.488T>A",5611,5651,11283,0.500841974652132,1,1,1,1,1,0,1,1,7,"NO","NO","COSM26023","haematopoietic_and_lymphoid_tissue",1,"NO","NO","NO","NO","NO","NO",-2.678,"Deleterious",35.53,35.31,5611,5651,11283,0.500841974652132,0,0,0,"NA",1,1,1,"Probably True (-5)"]
["Expert, Illumina validated, bq","UPN_Te4_014","X",15840871,"C","T","ZRSR2","ENST00000307771","stop_gained","Caa/Taa|p.Gln319*/c.955C>T",2789,490,3285,0.149162861491629,0,1,0,1,1,0,0,1,4,"NO","NO","COSM4385297","haematopoietic_and_lymphoid_tissue",1,"NO","NO","NO","NO","NO","NO","NA","NA",35.56,35.12,2789,490,3285,0.149162861491629,0,0,0,"NA",1,1,1,"Probably True (-3)"]
["Expert, prediction","UPN_Te4_005","X",123176485,"A","G","STAG2","ENST00000218089","missense_variant","gAa/gGa|p.Glu151Gly/c.452A>G",81,32,113,0.283185840707965,1,1,1,1,1,1,1,1,8,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.267,"Deleterious",34.02,32.78,41,16,57,0.280701754385965,40,16,56,0.285714285714286,1,1,1,"Probably True (-6)"]
["Expert, bq","UPN_Te4_003","X",123179164,"A","AG","STAG2","ENST00000218089","frameshift_variant","aca/aGca|p.Thr205fs/c.613_614insG",19000,6240,19088,0.326906957250629,1,1,0,0,1,1,0,1,5,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.47,"NA",6403,0,6428,0,12597,6240,12660,0.492890995260663,2,2,2,"Probably True (-3)"]
["Expert, bq","UPN_Te4_010","X",123200060,"G","GT","STAG2","ENST00000218089","frameshift_variant+stop_gained","aat/Taat|p.Asn712fs/c.2133dupT",4214,2490,4291,0.580284316010254,0,1,1,0,1,1,0,1,5,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",26.92,"NA",1,0,1,0,4213,2490,4290,0.58041958041958,1,1,3,"Probably True (-1)"]
["Expert, Illumina validated, bq","UPN_Te4_018","X",129149986,"G","A","BCORL1","ENST00000540052","missense_variant","Gct/Act|p.Ala1080Thr/c.3238G>A",7508,7337,14938,0.491163475699558,1,1,1,1,1,0,1,1,7,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.133,"Tolerated",34.9,33.73,0,0,0,"NA",7508,7337,14938,0.491163475699558,1,1,1,"Probably True (-5)"]
["Expert, bq","UPN_Te4_008","X",133511735,"C","T","PHF6","ENST00000332070","stop_gained","Cag/Tag|p.Gln30*/c.88C>T",738,425,1165,0.36480686695279,0,1,0,1,0,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.21,34,374,225,601,0.374376039933444,364,200,564,0.354609929078014,0.465296004922416,1,3,"Probably True (-1)"]
[{"$nulls":14},{"$f":"SUM(O2:O66)","v":51},{"$f":"SUM(P2:P66)","v":57},{"$f":"SUM(Q2:Q66)","v":42},{"$f":"SUM(R2:R66)","v":39},{"$f":"SUM(S2:S66)","v":63},{"$f":"SUM(T2:T66)","v":47},{"$f":"SUM(U2:U66)","v":31},{"$f":"SUM(V2:V66)","v":57}]

{"sheet":"TP Polymorphisms","index":2,"n_rows":113,"n_cols":50,"rows_kept":113,"cut":false,"hidden":false,"merged":[]}
["Polymorphism because...","Sample","Chr","Pos","Ref","Alt","Gene","ENST","Type","Mutation","Nr_Ref","Nr_Alt","DP","VAF","GATK","Platypus","VarScan","LoFreq","FreeBayes","SNVer","SAMtools","VarDict","Called","ESP6500","G1000","Cosmic","Cosmic_location","Cosmic_occurence","dbSNP_SNPs","dbSNP_SNVs","PM_flag","ExAC","ClinVar_clinical","ClinVar_noimpact","provean_score","prediction","BQ_Ref","BQ_Alt","Nr_Ref_fwd","Nr_Alt_fwd","DP_fwd","VAF_fwd","Nr_Ref_rev","Nr_Alt_rev","DP_rev","VAF_rev","strandbias","nr_samples","nr_samples_similar","Category"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_004",4,55593464,"A","C","KIT","ENST00000288135","missense_variant","Atg/Ctg|p.Met541Leu/c.1621A>C",5912,6036,11975,0.5040501044,1,1,1,1,1,0,1,1,7,11.186,"NO","COSM28026","haematopoietic_and_lymphoid_tissue, skin, soft_tissue, stomach","3, 1, 3, 1","rs3822214","rs3822214","NO",0.079,"NO","YES",0.35,"Tolerated",35.05,34.28,5912,6036,11975,0.5040501044,0,0,0,"NA",1,5,5,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_007",4,55593464,"A","C","KIT","ENST00000288135","missense_variant","Atg/Ctg|p.Met541Leu/c.1621A>C",7869,7273,15188,0.4788648933,1,1,1,1,1,0,1,1,7,11.186,"NO","COSM28026","haematopoietic_and_lymphoid_tissue, skin, soft_tissue, stomach","3, 1, 3, 1","rs3822214","rs3822214","NO",0.079,"NO","YES",0.35,"Tolerated",34.96,34.09,7869,7273,15188,0.4788648933,0,0,0,"NA",1,5,5,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_010",4,55593464,"A","C","KIT","ENST00000288135","missense_variant","Atg/Ctg|p.Met541Leu/c.1621A>C",7504,7377,14934,0.4939734833,1,1,1,1,1,0,1,1,7,11.186,"NO","COSM28026","haematopoietic_and_lymphoid_tissue, skin, soft_tissue, stomach","3, 1, 3, 1","rs3822214","rs3822214","NO",0.079,"NO","YES",0.35,"Tolerated",35.13,34.14,7504,7377,14934,0.4939734833,0,0,0,"NA",1,5,5,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_011",4,55593464,"A","C","KIT","ENST00000288135","missense_variant","Atg/Ctg|p.Met541Leu/c.1621A>C",7707,8304,16082,0.5163536874,1,1,1,1,1,1,1,1,8,11.186,"NO","COSM28026","haematopoietic_and_lymphoid_tissue, skin, soft_tissue, stomach","3, 1, 3, 1","rs3822214","rs3822214","NO",0.079,"NO","YES",0.35,"Tolerated",34.97,33.34,7707,8300,16078,0.5162333624,0,4,4,1,0.1259961302,5,5,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_013",4,55593464,"A","C","KIT","ENST00000288135","missense_variant","Atg/Ctg|p.Met541Leu/c.1621A>C",4118,3964,8126,0.4878168841,1,1,1,1,1,0,1,1,7,11.186,"NO","COSM28026","haematopoietic_and_lymphoid_tissue, skin, soft_tissue, stomach","3, 1, 3, 1","rs3822214","rs3822214","NO",0.079,"NO","YES",0.35,"Tolerated",34.93,33.35,4118,3964,8126,0.4878168841,0,0,0,"NA",1,5,5,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, VAF","UPN_Te4_003",4,106155185,"C","G","TET2","ENST00000380013","missense_variant","cCt/cGt|p.Pro29Arg/c.86C>G",10493,10224,20752,0.4926754048,1,1,1,1,1,1,1,1,8,1.5465,"NO","COSM5020248, COSM5020249","soft_tissue",4,"rs12498609","rs12498609","NO",0.06,"NO","YES",-1.923,"Tolerated",34.97,34.38,5218,5075,10314,0.4920496413,5275,5149,10438,0.4932937344,0.9004722822,2,2,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, VAF","UPN_Te4_022",4,106155185,"C","G","TET2","ENST00000380013","missense_variant","cCt/cGt|p.Pro29Arg/c.86C>G",8640,8670,17353,0.499625425,1,1,1,1,1,1,1,1,8,1.5465,"NO","COSM5020248, COSM5020249","soft_tissue",4,"rs12498609","rs12498609","NO",0.06,"NO","YES",-1.923,"Tolerated",34.32,32.96,4294,4312,8632,0.499536608,4346,4358,8721,0.4997133356,0.9636289537,2,2,"Polymorphism"]
["ESP6500, ExAC, ClinVar, prediction, VAF","UPN_Te4_002",4,106155199,"C","T","TET2","ENST00000380013","missense_variant","Ctc/Ttc|p.Leu34Phe/c.100C>T",16043,16886,33126,0.509750649,1,1,1,1,1,1,1,1,8,1.8953,"NO","NO","NO","O","NO","rs111948941","NO",0.015,"NO","YES",-1.31,"Tolerated",35.01,33.8,7977,8350,16467,0.5070747556,8066,8536,16659,0.512395702,0.6275905321,1,1,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, VAF","UPN_Te4_002",4,106155751,"G","A","TET2","ENST00000380013","missense_variant","Gtg/Atg|p.Val218Met/c.652G>A",12364,13431,25833,0.519916386,1,1,1,1,1,1,1,1,8,2.093,"NO","COSM4416139, COSM4416140","haematopoietic_and_lymphoid_tissue",2,"rs6843141","rs6843141","NO",0.055,"NO","YES",0.498,"Tolerated",34.89,35.12,12364,13428,25830,0.5198606272,0,3,3,1,0.2512542462,1,1,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, VAF","UPN_Te4_001",4,106156163,"G","A","TET2","ENST00000380013","missense_variant","gGt/gAt|p.Gly355Asp/c.1064G>A",10165,10338,20542,0.5032616104,1,1,1,1,1,1,1,1,8,4.3721,"NO","NO","NO","O","rs61744960","rs61744960","NO",0.027,"NO","YES",-1.044,"Tolerated",34.94,35.21,464,454,928,0.4892241379,9701,9884,19614,0.5039257673,0.5659331316,2,2,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, VAF","UPN_Te4_010",4,106156163,"G","A","TET2","ENST00000380013","missense_variant","gGt/gAt|p.Gly355Asp/c.1064G>A",17441,17284,34775,0.4970237239,1,1,1,0,1,1,1,1,7,4.3721,"NO","NO","NO","O","rs61744960","rs61744960","NO",0.027,"NO","YES",-1.044,"Tolerated",35.07,35.37,966,659,1631,0.4040465972,16475,16625,33144,0.5015990828,2.58854821421029E-014,2,2,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_008",4,106196829,"T","G","TET2","ENST00000380013","missense_variant","tTg/tGg|p.Leu1721Trp/c.5162T>G",21088,20712,41993,0.4932250613,1,1,1,1,1,1,1,1,8,13.4821,"NO","COSM5020013","soft_tissue",4,"rs34402524","rs34402524","NO",0.118,"NO","YES",-0.294,"Tolerated",35.36,35.15,10735,10987,21875,0.5022628571,10353,9725,20118,0.4833979521,1.20687167635539E-005,4,4,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_016",4,106196829,"T","G","TET2","ENST00000380013","missense_variant","tTg/tGg|p.Leu1721Trp/c.5162T>G",17837,18935,36950,0.5124492558,1,1,1,1,1,1,1,1,8,13.4821,"NO","COSM5020013","soft_tissue",4,"rs34402524","rs34402524","NO",0.118,"NO","YES",-0.294,"Tolerated",35.05,34.73,9265,9873,19248,0.512936409,8572,9062,17702,0.5119195571,0.7069570807,4,4,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_001",4,106196951,"A","G","TET2","ENST00000380013","missense_variant","Ata/Gta|p.Ile1762Val/c.5284A>G",14105,21141,35302,0.5988612543,1,1,0,0,1,1,0,1,5,37.335,"NO","COSM3760322","haematopoietic_and_lymphoid_tissue, prostate, thyroid","2, 5, 1","rs2454206","rs2454206","NO",0.272,"NO","YES",0.041,"Tolerated",35.82,35.19,14055,96,14187,0.0067667583,50,21045,21115,0.9966848212,2,26,26,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_004",4,106196951,"A","G","TET2","ENST00000380013","missense_variant","Ata/Gta|p.Ile1762Val/c.5284A>G",13005,16943,29974,0.5652565557,1,1,0,0,1,1,0,1,5,37.335,"NO","COSM3760322","haematopoietic_and_lymphoid_tissue, prostate, thyroid","2, 5, 1","rs2454206","rs2454206","NO",0.272,"NO","YES",0.041,"Tolerated",35.8,35.38,12961,38,13011,0.0029206056,44,16905,16963,0.9965807935,2,26,26,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_005",4,106196951,"A","G","TET2","ENST00000380013","missense_variant","Ata/Gta|p.Ile1762Val/c.5284A>G",14285,20606,34955,0.5895007867,1,1,0,0,1,1,0,1,5,37.335,"NO","COSM3760322","haematopoietic_and_lymphoid_tissue, prostate, thyroid","2, 5, 1","rs2454206","rs2454206","NO",0.272,"NO","YES",0.041,"Tolerated",35.82,35.44,14261,53,14354,0.0036923506,24,20553,20601,0.997670016,2,26,26,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_007",4,106196951,"A","G","TET2","ENST00000380013","missense_variant","Ata/Gta|p.Ile1762Val/c.5284A>G",26753,11632,38436,0.3026329483,1,1,0,0,1,1,0,1,5,37.335,"NO","COSM3760322","haematopoietic_and_lymphoid_tissue, prostate, thyroid","2, 5, 1","rs2454206","rs2454206","NO",0.272,"NO","YES",0.041,"Tolerated",35.65,35.37,15574,55,15645,0.0035155002,11179,11577,22791,0.5079636699,2,26,26,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_008",4,106196951,"A","G","TET2","ENST00000380013","missense_variant","Ata/Gta|p.Ile1762Val/c.5284A>G",20143,11006,31192,0.3528468838,1,1,0,0,1,1,0,1,5,37.335,"NO","COSM3760322","haematopoietic_and_lymphoid_tissue, prostate, thyroid","2, 5, 1","rs2454206","rs2454206","NO",0.272,"NO","YES",0.041,"Tolerated",35.6,35.42,8971,58,9036,0.0064187694,11172,10948,22156,0.4941325149,2,26,26,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_009",4,106196951,"A","G","TET2","ENST00000380013","missense_variant","Ata/Gta|p.Ile1762Val/c.5284A>G",4055,8880,12941,0.6861911753,1,1,1,0,1,1,1,1,7,37.335,"NO","COSM3760322","haematopoietic_and_lymphoid_tissue, prostate, thyroid","2, 5, 1","rs2454206","rs2454206","NO",0.272,"NO","YES",0.041,"Tolerated",35.8,35.44,4040,13,4055,0.0032059186,15,8867,8886,0.9978618051,2,26,26,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_010",4,106196951,"A","G","TET2","ENST00000380013","missense_variant","Ata/Gta|p.Ile1762Val/c.5284A>G",15688,26035,41755,0.6235181415,1,1,0,0,1,1,0,1,5,37.335,"NO","COSM3760322","haematopoietic_and_lymphoid_tissue, prostate, thyroid","2, 5, 1","rs2454206","rs2454206","NO",0.272,"NO","YES",0.041,"Tolerated",35.85,35.39,15654,62,15734,0.003940511,34,25973,26021,0.9981553361,2,26,26,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_011",4,106196951,"A","G","TET2","ENST00000380013","missense_variant","Ata/Gta|p.Ile1762Val/c.5284A>G",15588,24526,40175,0.6104791537,1,1,0,0,1,1,0,1,5,37.335,"NO","COSM3760322","haematopoietic_and_lymphoid_tissue, prostate, thyroid","2, 5, 1","rs2454206","rs2454206","NO",0.272,"NO","YES",0.041,"Tolerated",35.8,35.22,15546,63,15646,0.0040265883,42,24463,24529,0.9973093074,2,26,26,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_012",4,106196951,"A","G","TET2","ENST00000380013","missense_variant","Ata/Gta|p.Ile1762Val/c.5284A>G",7902,11004,18937,0.5810846491,1,1,0,0,1,1,0,1,5,37.335,"NO","COSM3760322","haematopoietic_and_lymphoid_tissue, prostate, thyroid","2, 5, 1","rs2454206","rs2454206","NO",0.272,"NO","YES",0.041,"Tolerated",35.9,35.38,7879,22,7913,0.0027802351,23,10982,11024,0.9961901306,2,26,26,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_014",4,106196951,"A","G","TET2","ENST00000380013","missense_variant","Ata/Gta|p.Ile1762Val/c.5284A>G",16646,26472,43203,0.6127352267,1,1,0,0,1,1,0,1,5,37.335,"NO","COSM3760322","haematopoietic_and_lymphoid_tissue, prostate, thyroid","2, 5, 1","rs2454206","rs2454206","NO",0.272,"NO","YES",0.041,"Tolerated",35.8,35.15,16583,99,16725,0.0059192825,63,26373,26478,0.9960344437,2,26,26,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_017",4,106196951,"A","G","TET2","ENST00000380013","missense_variant","Ata/Gta|p.Ile1762Val/c.5284A>G",8310,11856,20183,0.5874250607,1,1,0,0,1,1,0,1,5,37.335,"NO","COSM3760322","haematopoietic_and_lymphoid_tissue, prostate, thyroid","2, 5, 1","rs2454206","rs2454206","NO",0.272,"NO","YES",0.041,"Tolerated",35.88,35.33,8260,25,8292,0.0030149542,50,11831,11891,0.994954167,2,26,26,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_018",4,106196951,"A","G","TET2","ENST00000380013","missense_variant","Ata/Gta|p.Ile1762Val/c.5284A>G",29362,12352,41794,0.295544815,1,1,0,0,1,1,0,1,5,37.335,"NO","COSM3760322","haematopoietic_and_lymphoid_tissue, prostate, thyroid","2, 5, 1","rs2454206","rs2454206","NO",0.272,"NO","YES",0.041,"Tolerated",35.65,35.18,17716,66,17811,0.0037055752,11646,12286,23983,0.5122795313,2,26,26,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_020",4,106196951,"A","G","TET2","ENST00000380013","missense_variant","Ata/Gta|p.Ile1762Val/c.5284A>G",16193,7445,23666,0.3145863264,1,1,0,0,1,1,0,1,5,37.335,"NO","COSM3760322","haematopoietic_and_lymphoid_tissue, prostate, thyroid","2, 5, 1","rs2454206","rs2454206","NO",0.272,"NO","YES",0.041,"Tolerated",35.77,35.33,8903,27,8940,0.0030201342,7290,7418,14726,0.5037348907,2,26,26,"Polymorphism"]
["ESP6500, dbSNP, ExAC, ClinVar, prediction, many samples, VAF","UPN_Te4_002",4,106197000,"A","G","TET2","ENST00000380013","missense_variant","cAt/cGt|p.His1778Arg/c.5333A>G",16606,15571,32219,0.4832862597,1,1,1,1,1,1,1,1,8,3.017,"NO","NO","NO","O","rs62621450","rs62621450","NO",0.045,"NO","YES",-1.986,"Tolerated",35.33,35.31,7431,7430,14886,0.4991266962,9175,8141,17333,0.4696821093,2,27,27,"Polymorphism"]
["ESP6500, ExAC, ClinVar, prediction, VAF","UPN_Te4_013",4,106197557,"T","C","TET2","ENST00000380013","missense_variant","Tac/Cac|p.Tyr1964His/c.5890T>C",2455,1936,4427,0.4373164671,1,1,1,1,1,0,1,1,7,0.0314,"NO","COSM4642835","large_intestine",1,"NO","rs370470545","NO",0.0001174,"NO","NO",-0.735,"Tolerated",32.06,33.62,2455,1936,4427,0.4373164671,0,0,0,"NA",1,1,1,"Polymorphism"]
["dbSNP, ClinVar, prediction, VAF, many samples","UPN_Te4_001",7,148525904,"C","G","EZH2","ENST00000320356","missense_variant","Gac/Cac|p.Asp185His/c.553G>C",6752,6452,13251,0.4869066486,1,1,1,1,1,0,1,1,7,"NO","NO","COSM3762469","soft_tissue, thyroid","3, 1","rs2302427","rs2302427","NO","NO","NO","YES",-1.884,"Tolerated",34.48,34.04,6752,6452,13251,0.4869066486,0,0,0,"NA",1,5,5,"Polymorphism"]
["dbSNP, ClinVar, prediction, VAF, many samples","UPN_Te4_003",7,148525904,"C","G","EZH2","ENST00000320356","missense_variant","Gac/Cac|p.Asp185His/c.553G>C",3612,3834,7456,0.5142167382,1,1,1,1,1,0,1,1,7,"NO","NO","COSM3762469","soft_tissue, thyroid","3, 1","rs2302427","rs2302427","NO","NO","NO","YES",-1.884,"Tolerated",35.01,34.59,3612,3834,7456,0.5142167382,0,0,0,"NA",1,5,5,"Polymorphism"]
["dbSNP, ClinVar, prediction, VAF, many samples","UPN_Te4_006",7,148525904,"C","G","EZH2","ENST00000320356","missense_variant","Gac/Cac|p.Asp185His/c.553G>C",5536,5721,11274,0.5074507717,1,1,1,1,1,0,1,1,7,"NO","NO","COSM3762469","soft_tissue, thyroid","3, 1","rs2302427","rs2302427","NO","NO","NO","YES",-1.884,"Tolerated",34.89,34.56,5536,5721,11274,0.5074507717,0,0,0,"NA",1,5,5,"Polymorphism"]
["dbSNP, ClinVar, prediction, VAF, many samples","UPN_Te4_009",7,148525904,"C","G","EZH2","ENST00000320356","missense_variant","Gac/Cac|p.Asp185His/c.553G>C",2325,2372,4710,0.5036093418,1,1,1,1,1,1,1,1,8,"NO","NO","COSM3762469","soft_tissue, thyroid","3, 1","rs2302427","rs2302427","NO","NO","NO","YES",-1.884,"Tolerated",34.99,34.62,2325,2370,4708,0.5033984707,0,2,2,1,0.499943601,5,5,"Polymorphism"]
["dbSNP, ClinVar, prediction, VAF, many samples","UPN_Te4_013",7,148525904,"C","G","EZH2","ENST00000320356","missense_variant","Gac/Cac|p.Asp185His/c.553G>C",3780,3719,7528,0.4940223167,1,1,1,1,1,0,1,1,7,"NO","NO","COSM3762469","soft_tissue, thyroid","3, 1","rs2302427","rs2302427","NO","NO","NO","YES",-1.884,"Tolerated",34.57,34.08,3780,3719,7528,0.4940223167,0,0,0,"NA",1,5,5,"Polymorphism"]
["VAF, dbSNP, ExAC, prediction, ClinVar","UPN_Te4_013",9,21970916,"C","T","CDKN2A","ENST00000498124","missense_variant","Gcg/Acg|p.Ala148Thr/c.442G>A",834,878,1718,0.5110593714,1,1,1,1,1,0,1,1,7,3.2093,"NO","COSM3774362, COSM3736958, COSM3774361","kidney, skin","3, 1","rs3731249","rs3731249","NO",0.022,"NO","YES",-0.884,"Tolerated",35.23,35.41,834,878,1718,0.5110593714,0,0,0,"NA",1,1,1,"Polymorphism"]
["VAF, dbSNP, ExAC, prediction, ClinVar","UPN_Te4_014",9,139391338,"C","T","NOTCH1","ENST00000277541","missense_variant","Gtc/Atc|p.Val2285Ile/c.6853G>A",6320,6286,12638,0.4973888273,1,1,1,1,1,0,1,1,7,1.6164,"NO","COSM41579, COSM5020399","soft_tissue",6,"rs61751489","rs61751489","NO",0.025,"NO","YES",0.011,"Tolerated",35.28,34.56,6320,6270,12622,0.4967517034,0,16,16,1,1.44740985265339E-005,1,1,"Polymorphism"]
["VAF, ESP6500, 1000 Genomes, dbSNP, ClinVar","UPN_Te4_009",11,534332,"G","A","HRAS","ENST00000417302","5_prime_UTR_premature_start_codon_gain_variant","|c.-10C>T",2,1967,2087,0.9425011979,1,1,0,1,1,1,1,0,6,4.6174,0.0457,"NO","NO","O","rs41294870","rs41294870","NO","NO","NO","YES","NA","NA",23,21.35,2,938,1016,0.9232283465,0,1029,1071,0.9607843137,0.2277836961,1,1,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_001",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",52,5978,6053,0.9876094499,1,1,1,1,1,0,1,1,7,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",23.37,33.45,0,0,0,"NA",52,5978,6053,0.9876094499,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_002",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",22,4967,5002,0.9930027989,1,1,1,1,1,0,1,1,7,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",24.95,34.08,0,0,0,"NA",22,4967,5002,0.9930027989,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_003",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",1191,1724,2935,0.5873935264,1,1,1,1,1,0,1,1,7,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",34.91,33.92,0,0,0,"NA",1191,1724,2935,0.5873935264,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_004",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",18,3163,3186,0.9927809165,1,1,1,1,1,0,1,1,7,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",19.89,34.18,0,0,0,"NA",18,3163,3186,0.9927809165,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_005",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",21,4341,4382,0.9906435418,1,1,1,1,1,0,1,1,7,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",23.43,34.06,0,0,0,"NA",21,4341,4382,0.9906435418,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_006",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",1706,2830,4539,0.6234853492,1,1,1,1,1,0,1,1,7,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",34.89,34.08,0,0,0,"NA",1706,2830,4539,0.6234853492,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_007",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",1514,1885,3406,0.5534351145,1,1,1,1,1,0,1,1,7,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",34.86,34.23,0,0,0,"NA",1514,1885,3406,0.5534351145,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_008",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",36,7970,8031,0.9924044328,1,1,0,1,1,0,1,1,6,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",27.22,34.16,0,0,0,"NA",36,7970,8031,0.9924044328,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_009",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",824,1021,1849,0.5521903732,1,1,1,1,1,0,1,1,7,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",34.83,34.12,0,0,0,"NA",824,1021,1849,0.5521903732,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_010",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",20,4483,4516,0.9926926484,1,1,1,1,1,0,1,1,7,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",24.25,34.05,0,0,0,"NA",20,4483,4516,0.9926926484,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_011",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",2994,3835,6854,0.5595272833,1,1,1,1,1,0,1,1,7,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",34.55,33.54,0,0,0,"NA",2994,3835,6854,0.5595272833,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_012",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",17,2553,2577,0.9906868452,1,1,1,1,1,0,1,1,7,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",22.53,33.73,0,0,0,"NA",17,2553,2577,0.9906868452,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_014",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",54,6440,6523,0.9872757933,1,1,1,1,1,0,1,1,7,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",21.89,33.43,0,0,0,"NA",54,6440,6523,0.9872757933,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_015",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",23,4437,4478,0.9908441268,1,1,0,1,1,0,1,1,6,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",18,33.51,0,0,0,"NA",23,4437,4478,0.9908441268,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_016",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",32,4504,4559,0.9879359509,1,1,0,1,1,0,1,1,6,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",22.44,33.5,0,0,0,"NA",32,4504,4559,0.9879359509,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_017",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",1183,1475,2664,0.5536786787,1,1,1,1,1,0,1,1,7,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",34.76,33.87,0,0,0,"NA",1183,1475,2664,0.5536786787,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_018",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",2565,3230,5813,0.5556511268,1,1,1,1,1,0,1,1,7,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",34.44,33.42,0,0,0,"NA",2565,3230,5813,0.5556511268,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_019",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",643,900,1548,0.5813953488,1,1,1,1,1,0,1,1,7,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",34.66,33.93,0,0,0,"NA",643,900,1548,0.5813953488,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_021",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",1967,2481,4459,0.5564027809,1,1,1,1,1,0,1,1,7,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",34.41,33.81,0,0,0,"NA",1967,2481,4459,0.5564027809,1,20,20,"Polymorphism"]
["VAF, many samples, ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction","UPN_Te4_022",17,7579472,"G","C","TP53","ENST00000269305","missense_variant","cCc/cGc|p.Pro72Arg/c.215C>G",1308,1752,3068,0.5710560626,1,1,1,1,1,0,1,1,7,25.4767,0.7147,"COSM3766190, COSM3766191, COSM250061, COSM3766193, COSM3766192","large_intestine, liver, pancreas, pleura, prostate, soft_tissue, stomach, upper_aerodigestive_tract, urinary_tract, central_nervous_system","10, 5, 15, 5, 5, 100, 5, 7, 5, 1","rs1042522","rs1042522","NO",0.659,"NO","YES",0.155,"Tolerated",34.66,33.52,1,0,1,0,1307,1752,3067,0.5712422563,0.4274509804,20,20,"Polymorphism"]
["ESP6500, 1000 Genomes, ExAC, ClinVar, prediction","UPN_Te4_001",19,45297479,"C","T","CBLC","ENST00000270279","missense_variant","Cca/Tca|p.Pro435Ser/c.1303C>T",6109,2770,8925,0.3103641457,0,1,1,1,1,0,1,1,6,3.9302,0.0278,"COSM5020655","soft_tissue",1,"NO","rs116023028","NO",0.037,"NO","YES",-2.126,"Tolerated",35.09,32.57,6109,2770,8925,0.3103641457,0,0,0,"NA",1,1,1,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_001",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",63,22966,23090,0.9946297098,1,1,1,1,1,1,1,1,8,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",34.27,34.39,63,22955,23078,0.9946702487,0,11,12,0.9166666667,1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_002",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",23,19384,19446,0.9968116836,1,1,1,1,1,1,1,1,8,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",35.04,34.38,23,19383,19445,0.9968115197,0,1,1,1,1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_003",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",51,16966,17072,0.9937910028,1,1,1,1,1,1,1,1,8,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",35.33,34.37,51,16961,17067,0.9937891838,0,5,5,1,1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_004",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",32,16803,16887,0.9950257595,1,1,1,1,1,1,1,1,8,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",33.44,34.51,32,16802,16886,0.9950254649,0,1,1,1,1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_005",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",57,21138,21249,0.9947762248,1,1,1,1,1,1,1,1,8,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",35.14,34.45,57,21111,21222,0.9947695787,0,27,27,1,1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_006",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",74,21750,21879,0.9941039353,1,1,1,1,1,1,1,1,8,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",35.68,34.46,74,21742,21871,0.9941017786,0,8,8,1,1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_007",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",61,26672,26801,0.9951867468,1,1,1,1,1,0,1,1,7,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",34.87,34.4,61,26672,26801,0.9951867468,0,0,0,"NA",1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_008",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",32,20538,20633,0.9953957253,1,1,1,1,1,1,1,1,8,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",34.38,34.43,32,20514,20609,0.9953903634,0,24,24,1,1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_009",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",19,9304,9350,0.9950802139,1,1,1,1,1,0,1,1,7,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",36,34.4,19,9304,9350,0.9950802139,0,0,0,"NA",1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_010",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",35,20557,20643,0.9958339389,1,1,1,1,1,0,1,1,7,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",35.37,34.43,35,20557,20643,0.9958339389,0,0,0,"NA",1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_011",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",54,25100,25220,0.9952418715,1,1,1,1,1,1,1,1,8,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",34.7,34.33,54,25063,25183,0.9952348807,0,37,37,1,1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_012",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",37,10892,10954,0.9943399671,1,1,1,1,1,1,1,1,8,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",35.3,34.65,37,10888,10950,0.9943378995,0,4,4,1,1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_013",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",31,10430,10507,0.9926715523,1,1,1,1,1,1,1,1,8,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",34.97,34.27,31,10426,10503,0.9926687613,0,4,4,1,1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_014",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",91,26245,26401,0.9940911329,1,1,1,1,1,1,1,1,8,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",34.62,34.27,91,26236,26392,0.9940891179,0,9,9,1,1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_015",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",65,15718,15831,0.992862106,1,1,1,1,1,1,1,1,8,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",35.02,34.29,65,15717,15830,0.9928616551,0,1,1,1,1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_016",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",52,18843,18948,0.994458518,1,1,1,1,1,0,1,1,7,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",35.15,34.2,52,18843,18948,0.994458518,0,0,0,"NA",1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_017",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",30,11573,11623,0.9956981846,1,1,1,1,1,1,1,1,8,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",34.2,34.65,29,11553,11602,0.9957765902,1,20,21,0.9523809524,0.0529596593,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_018",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",89,24816,24962,0.9941511097,1,1,1,1,1,1,1,1,8,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",35.06,34.34,89,24809,24955,0.994149469,0,7,7,1,1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_019",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",25,10831,10878,0.9956793528,1,1,1,1,1,1,1,1,8,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",35.52,34.64,25,10803,10850,0.9956682028,0,28,28,1,1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_020",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",27,14085,14147,0.9956174454,1,1,1,1,1,1,1,1,8,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",34.22,34.67,27,14082,14144,0.9956165158,0,3,3,1,1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_021",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",37,12877,12947,0.9945933421,1,1,1,1,1,0,1,1,7,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",33.11,34.73,37,12877,12947,0.9945933421,0,0,0,"NA",1,22,22,"Polymorphism"]
["VAF, many samples, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_022",20,31022959,"T","C","ASXL1","ENST00000375687","missense_variant","cTg/cCg|p.Leu815Pro/c.2444T>C",36,16550,16628,0.9953091172,1,1,1,1,1,1,1,1,8,0,1,"NO","NO","O","rs6058694","rs6058694","NO",1,"NO","NO",1.033,"Tolerated",34.42,34.67,36,16533,16611,0.9953043164,0,17,17,1,1,22,22,"Polymorphism"]
["ESP6500, 1000 Genomes, ExAC, ClinVar, prediction, many samples","UPN_Te4_014",20,31023821,"G","T","ASXL1","ENST00000375687","missense_variant","gaG/gaT|p.Glu1102Asp/c.3306G>T",30385,11239,41897,0.2682530969,1,1,0,0,1,1,0,1,5,1,0.0209,"COSM36205","haematopoietic_and_lymphoid_tissue, soft_tissue","13, 1","NO","rs139115934","NO",0.01,"NO","YES",-1.374,"Tolerated",35.5,34.23,18326,30,18514,0.0016203954,12059,11209,23383,0.4793653509,2,4,4,"Polymorphism"]
["ESP6500, 1000 Genomes, ExAC, ClinVar, prediction, many samples","UPN_Te4_017",20,31023821,"G","T","ASXL1","ENST00000375687","missense_variant","gaG/gaT|p.Glu1102Asp/c.3306G>T",14742,5725,20536,0.27877873,1,1,0,0,1,0,0,1,4,1,0.0209,"COSM36205","haematopoietic_and_lymphoid_tissue, soft_tissue","13, 1","NO","rs139115934","NO",0.01,"NO","YES",-1.374,"Tolerated",35.67,34.92,9042,0,9076,0,5700,5725,11460,0.4995636998,2,4,4,"Polymorphism"]
["ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction, many samples","UPN_Te4_003","X",44929077,"C","A","KDM6A","ENST00000377967","missense_variant","aCg/aAg|p.Thr726Lys/c.2177C>A",19,10284,10378,0.9909423781,1,1,0,1,1,1,1,1,7,11.8014,0.2117,"COSM3759497, COSM3759496","haematopoietic_and_lymphoid_tissue, soft_tissue","2, 6","rs2230018","rs2230018","NO",0.136,"NO","NO",-0.99,"Tolerated",14.95,32.04,0,6,6,1,19,10278,10372,0.9909371384,1,4,4,"Polymorphism"]
["ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction, many samples","UPN_Te4_009","X",44929077,"C","A","KDM6A","ENST00000377967","missense_variant","aCg/aAg|p.Thr726Lys/c.2177C>A",3095,3221,6335,0.508445146,1,1,1,1,1,0,1,1,7,11.8014,0.2117,"COSM3759497, COSM3759496","haematopoietic_and_lymphoid_tissue, soft_tissue","2, 6","rs2230018","rs2230018","NO",0.136,"NO","NO",-0.99,"Tolerated",34.35,31.92,0,0,0,"NA",3095,3221,6335,0.508445146,1,4,4,"Polymorphism"]
["ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction, many samples","UPN_Te4_017","X",44929077,"C","A","KDM6A","ENST00000377967","missense_variant","aCg/aAg|p.Thr726Lys/c.2177C>A",2887,2926,5834,0.5015426808,1,1,1,1,1,0,1,1,7,11.8014,0.2117,"COSM3759497, COSM3759496","haematopoietic_and_lymphoid_tissue, soft_tissue","2, 6","rs2230018","rs2230018","NO",0.136,"NO","NO",-0.99,"Tolerated",34.41,33.86,0,0,0,"NA",2887,2926,5834,0.5015426808,1,4,4,"Polymorphism"]
["ESP6500, 1000 Genomes, dbSNP, ExAC, ClinVar, prediction, many samples","UPN_Te4_020","X",44929077,"C","A","KDM6A","ENST00000377967","missense_variant","aCg/aAg|p.Thr726Lys/c.2177C>A",2,4610,4631,0.9954653423,1,1,1,1,1,0,1,1,7,11.8014,0.2117,"COSM3759497, COSM3759496","haematopoietic_and_lymphoid_tissue, soft_tissue","2, 6","rs2230018","rs2230018","NO",0.136,"NO","NO",-0.99,"Tolerated",36,33.71,0,0,0,"NA",2,4610,4631,0.9954653423,1,4,4,"Polymorphism"]
["VAF, prediction, ESP6500, 1000 Genomes, dbSNP, ExAC","UPN_Te4_005","X",76856021,"T","C","ATRX","ENST00000373344","missense_variant","aAt/aGt|p.Asn1860Ser/c.5579A>G",15626,15014,31251,0.4804326262,1,1,0,1,1,1,0,1,6,0.9668,0.0028,"COSM5001991, COSM5001990","pancreas, soft_tissue","2, 2","rs45439799","rs45439799","YES",0.006449,"NO","NO",0.135,"Tolerated",31.9,31.48,7773,7176,15522,0.4623115578,7853,7838,15729,0.4983152139,0.0006578213,2,2,"Polymorphism"]
["VAF, prediction, ESP6500, 1000 Genomes, dbSNP, ExAC","UPN_Te4_012","X",76856021,"T","C","ATRX","ENST00000373344","missense_variant","aAt/aGt|p.Asn1860Ser/c.5579A>G",8607,8054,17020,0.4732079906,1,1,0,1,1,1,0,1,6,0.9668,0.0028,"COSM5001991, COSM5001990","pancreas, soft_tissue","2, 2","rs45439799","rs45439799","YES",0.006449,"NO","NO",0.135,"Tolerated",32.24,30.81,4287,3802,8436,0.4506875296,4320,4252,8584,0.4953401678,0.0008076522,2,2,"Polymorphism"]
["1000 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_001","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",49,19952,20106,0.9923405948,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",31,33.23,22,10104,10145,0.9959586003,27,9848,9961,0.9886557575,0.4754892529,22,22,"Polymorphism"]
["1001 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_002","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",43,31461,31602,0.9955382571,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",24.09,33.98,12,15863,15892,0.9981751825,31,15598,15710,0.9928707829,0.0034196739,22,22,"Polymorphism"]
["1002 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_003","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",13,24450,24530,0.9967386873,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",22.46,33.97,3,12339,12352,0.9989475389,10,12111,12178,0.9944982756,0.0552251673,22,22,"Polymorphism"]
["1003 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_004","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",24,27644,27741,0.9965033705,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",27.21,33.98,8,13902,13930,0.9979899497,16,13742,13811,0.9950039823,0.1058013073,22,22,"Polymorphism"]
["1004 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_005","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",54,34393,34514,0.9964941763,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",24.22,33.96,17,17329,17358,0.9983293006,37,17064,17156,0.9946374446,0.0061138143,22,22,"Polymorphism"]
["1005 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_006","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",48,34055,34185,0.9961971625,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",26.69,34.03,17,17157,17188,0.9981964161,31,16898,16997,0.9941754427,0.0429785216,22,22,"Polymorphism"]
["1006 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_007","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",44,22089,22189,0.9954932624,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",31.09,33.83,20,11138,11166,0.9974923876,24,10951,11023,0.9934682028,0.5483695814,22,22,"Polymorphism"]
["1007 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_008","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",139,46526,46764,0.994910615,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",29.88,33.95,59,23451,23532,0.9965578786,80,23075,23232,0.9932420799,0.0620946808,22,22,"Polymorphism"]
["1008 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_009","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",19,14652,14703,0.9965313201,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",26.53,33.88,6,7380,7394,0.9981065729,13,7272,7309,0.994937748,0.1127563424,22,22,"Polymorphism"]
["1009 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_010","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",28,19111,19181,0.9963505552,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",26.36,33.92,10,9598,9614,0.9983357603,18,9513,9567,0.9943555974,0.1342813728,22,22,"Polymorphism"]
["1010 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_011","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",33,20598,20736,0.9933449074,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",25.36,33.2,10,10452,10477,0.9976138208,23,10146,10259,0.9889852812,0.0226590324,22,22,"Polymorphism"]
["1011 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_012","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",32,20033,20153,0.9940455515,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",28.5,33.59,12,10074,10112,0.9962420886,20,9959,10041,0.9918334827,0.160372018,22,22,"Polymorphism"]
["1012 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_013","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",10,5027,5058,0.9938710953,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",31.6,33.27,4,2547,2556,0.9964788732,6,2480,2502,0.9912070344,0.5434672322,22,22,"Polymorphism"]
["1013 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_014","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",51,23827,23981,0.9935782494,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",27.55,33.28,18,12091,12126,0.9971136401,33,11736,11855,0.9899620413,0.0345818239,22,22,"Polymorphism"]
["1014 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_015","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",121,31686,31960,0.9914267835,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",29.91,33.22,52,16047,16121,0.995409714,69,15639,15839,0.9873729402,0.1010635059,22,22,"Polymorphism"]
["1015 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_016","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",44,35196,35387,0.9946025377,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",28.02,33.32,15,17858,17887,0.9983787108,29,17338,17500,0.9907428571,0.0337667856,22,22,"Polymorphism"]
["1016 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_017","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",15,19470,19536,0.9966216216,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",30,33.62,6,9798,9812,0.9985731757,9,9672,9724,0.9946524064,0.4515670934,22,22,"Polymorphism"]
["1017 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_018","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",80,42357,42629,0.9936193671,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",28.49,33.24,30,21450,21504,0.9974888393,50,20907,21125,0.9896804734,0.0245858013,22,22,"Polymorphism"]
["1018 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_019","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",8,9981,10014,0.9967046135,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",29.5,33.61,3,5014,5018,0.9992028697,5,4967,4996,0.9941953563,0.5057176653,22,22,"Polymorphism"]
["1019 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_020","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",8,14804,14838,0.9977085861,1,1,0,1,1,1,1,1,7,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",23.38,33.62,2,7445,7452,0.9990606549,6,7359,7386,0.9963444354,0.1772086066,22,22,"Polymorphism"]
["1020 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_021","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",47,33899,34016,0.9965604421,1,1,1,1,1,1,1,1,8,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",29.45,33.58,20,17040,17077,0.9978333431,27,16859,16939,0.995277171,0.3098001172,22,22,"Polymorphism"]
["1021 Genomes, dbSNP, many samples, VAF, ExAC, prediction","UPN_Te4_022","X",129147079,"T","C","BCORL1","ENST00000540052","missense_variant","Ttc/Ctc|p.Phe111Leu/c.331T>C",24,14347,14389,0.9970811036,0,1,1,1,1,1,1,1,7,"NO",1,"COSM4591817, COSM4591818","upper_aerodigestive_tract",46,"rs4830173","rs4830173","NO",1,"NO","NO",-0.361,"Tolerated",31,33.58,11,7204,7219,0.9979221499,13,7143,7170,0.9962343096,0.6886331525,22,22,"Polymorphism"]
["VAF, ESP6500, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_004","X",129147373,"G","A","BCORL1","ENST00000540052","missense_variant","Ggt/Agt|p.Gly209Ser/c.625G>A",5598,4743,10805,0.4389634429,1,1,1,0,0,1,1,1,6,10.2705,0.0097,"COSM5019165, COSM5019166","soft_tissue",6,"rs5932715","rs5932715","NO",0.073,"NO","NO",-0.09,"Tolerated",29.06,27.89,941,573,1894,0.3025343189,4657,4170,8911,0.4679609471,1.08293012371138E-011,2,2,"Polymorphism"]
["VAF, ESP6500, 1000 Genomes, dbSNP, ExAC, prediction","UPN_Te4_007","X",129147373,"G","A","BCORL1","ENST00000540052","missense_variant","Ggt/Agt|p.Gly209Ser/c.625G>A",59,8225,8912,0.9229129264,1,1,1,1,0,1,1,1,7,10.2705,0.0097,"COSM5019165, COSM5019166","soft_tissue",6,"rs5932715","rs5932715","NO",0.073,"NO","NO",-0.09,"Tolerated",27.85,27.62,11,1080,1625,0.6646153846,48,7145,7287,0.9805132428,0.2424398347,2,2,"Polymorphism"]
[{"$nulls":14},{"$f":"SUM(O2:O112)","v":109},{"$f":"SUM(P2:P112)","v":111},{"$f":"SUM(Q2:Q112)","v":89},{"$f":"SUM(R2:R112)","v":94},{"$f":"SUM(S2:S112)","v":109},{"$f":"SUM(T2:T112)","v":70},{"$f":"SUM(U2:U112)","v":95},{"$f":"SUM(V2:V112)","v":110}]

{"sheet":"FN Mutations","index":3,"n_rows":10,"n_cols":50,"rows_kept":10,"cut":false,"hidden":false,"merged":[]}
["True because...","Sample","Chr","Pos","Ref","Alt","Gene","ENST","Type","Mutation","Nr_Ref","Nr_Alt","DP","VAF","GATK","Platypus","VarScan","LoFreq","FreeBayes","SNVer","SAMtools","VarDict","Called","ESP6500","G1000","Cosmic","Cosmic_location","Cosmic_occurence","dbSNP_SNPs","dbSNP_SNVs","PM_flag","ExAC","ClinVar_clinical","ClinVar_noimpact","provean_score","prediction","BQ_Ref","BQ_Alt","Nr_Ref_fwd","Nr_Alt_fwd","DP_fwd","VAF_fwd","Nr_Ref_rev","Nr_Alt_rev","DP_rev","VAF_rev","strandbias","nr_samples","nr_samples_similar","Category"]
["Validated with independent analysis","UPN_Te4_018",9,5070024,"ACAA","T","JAK2","ENST00000381652","missense_variant+disruptive_inframe_deletion","cacaaa/cTa|p.His538_Lys539delinsLeu/c.1613_1616delACAAinsT",3970,"NA",3993,"NA",0,0,0,0,0,0,0,1,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-18.145,"Deleterious",32.69,"NA",11,"NA",11,"NA",3959,"NA",3982,"NA","NA",1,1,"Artifact (0)"]
["Validated with independent analysis","UPN_Te4_019",19,13054601,"CAAAGAGGAGGAGGA","CG","CALR","ENST00000316448","frameshift_variant+missense_variant","aaagaggaggaggag/Gg|p.Lys377fs/c.1129_1142delAAAGAGGAGGAGGAinsG",1093,575,1121,0.512934879571811,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",30.086,"ComplexIndel","NA","NA","NA","NA","NA","NA","NA","NA","NA",1,3,"Artifact (2)"]
["Validated with independent analysis","UPN_Te4_013",19,13054605,"G","C","CALR","ENST00000316448","missense_variant","Gag/Cag|p.Glu378Gln/c.1132G>C",1002,610,1618,0.377008652657602,0,0,1,0,0,0,1,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.538,"Tolerated",33.11,30.19,512,0,515,0,490,610,1103,0.553037171350861,1.12418843019634E-136,1,1,"Artifact (1)"]
["Validated with independent analysis","UPN_Te4_013",19,13054610,"G","C","CALR","ENST00000316448","missense_variant","gaG/gaC|p.Glu379Asp/c.1137G>C",1009,607,1620,0.374691358024691,0,0,1,0,0,0,1,1,3,"NO","NO","COSM3720629","haematopoietic_and_lymphoid_tissue",1,"NO","NO","NO","NO","NO","NO",-0.699,"Tolerated",32.89,30.45,515,0,515,0,494,607,1105,0.549321266968326,5.50435393284181E-136,1,1,"Artifact (1)"]
["Validated with independent analysis","UPN_Te4_013",19,13054615,"AG","A","CALR","ENST00000316448","frameshift_variant","gca/|p.Ala382fs/c.1144delG",1003,611,1620,0.37716049382716,0,0,1,0,0,1,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",32.92,"NA",513,0,515,0,490,611,1105,0.552941176470588,4.68569264335351E-137,1,2,"Artifact (2)"]
["Validated with independent analysis","UPN_Te4_011",20,31022436,"ATCGGAG","TC","ASXL1","ENST00000375687","frameshift_variant+missense_variant","atcggaggg/TCgg|p.Ile641fs/c.1921_1927delATCGGAGinsTC",16184,875,17001,0.0514675607317217,0,0,0,0,0,0,0,1,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.7071428571429,"ComplexIndel","NA","NA","NA","NA","NA","NA","NA","NA",2,2,2,"Artifact (1)"]
["Validated with independent analysis","UPN_Te4_008",20,31022441,"A","AG","ASXL1","ENST00000375687","frameshift_variant","ggt/ggGt|p.Gly646fs/c.1934dupG",10554,1185,10812,0.109600443951165,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.87,"NA",9742,1120,9787,0.114437519158067,812,65,1025,0.0634146341463415,0.00512357091274712,42,86,"Artifact (1)"]
["Validated with independent analysis","UPN_Te4_008","X",133511737,"GTTAC","GGG","PHF6","ENST00000332070","frameshift_variant+stop_gained","ggacagttacta/ggCTAGGGta|p.Gln30fs/c.87_94delACAGTTACinsCTAGGG",735,437,746,0.585790884718499,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.105,"ComplexIndel","NA","NA","NA","NA","NA","NA","NA","NA","NA",1,2,"Artifact (1)"]
[{"$nulls":14},{"$f":"SUM(O2:O9)","v":0},{"$f":"SUM(P2:P9)","v":0},{"$f":"SUM(Q2:Q9)","v":3},{"$f":"SUM(R2:R9)","v":0},{"$f":"SUM(S2:S9)","v":3},{"$f":"SUM(T2:T9)","v":2},{"$f":"SUM(U2:U9)","v":2},{"$f":"SUM(V2:V9)","v":6}]

{"sheet":"FN Polymorphisms","index":4,"n_rows":8,"n_cols":50,"rows_kept":8,"cut":false,"hidden":false,"merged":[]}
["Polymorphism because...","Sample","Chr","Pos","Ref","Alt","Gene","ENST","Type","Mutation","Nr_Ref","Nr_Alt","DP","VAF","GATK","Platypus","VarScan","LoFreq","FreeBayes","SNVer","SAMtools","VarDict","Called","ESP6500","G1000","Cosmic","Cosmic_location","Cosmic_occurence","dbSNP_SNPs","dbSNP_SNVs","PM_flag","ExAC","ClinVar_clinical","ClinVar_noimpact","provean_score","prediction","BQ_Ref","BQ_Alt","Nr_Ref_fwd","Nr_Alt_fwd","DP_fwd","VAF_fwd","Nr_Ref_rev","Nr_Alt_rev","DP_rev","VAF_rev","strandbias","nr_samples","nr_samples_similar","Category"]
["Validated with independent analysis","UPN_Te4_014",3,128204951,"C","T","GATA2","ENST00000341105","missense_variant","Gcc/Acc|p.Ala164Thr/c.490G>A",165,280,447,0.626398210290828,1,1,1,1,1,0,1,0,6,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",35.33,20.61,0,0,0,"NA",165,280,447,0.626398210290828,"NA","NA","NA","low bq"]
["Validated with independent analysis","UPN_Te4_016",3,128204951,"C","T","GATA2","ENST00000341105","missense_variant","Gcc/Acc|p.Ala164Thr/c.490G>A",149,177,330,0.536363636363636,1,1,1,1,1,1,1,0,7,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",35.3,21.62,0,6,6,1,149,171,324,0.527777777777778,"NA","NA","NA","low bq"]
["Validated with independent analysis","UPN_Te4_017",3,128204951,"C","T","GATA2","ENST00000341105","missense_variant","Gcc/Acc|p.Ala164Thr/c.490G>A",87,87,176,0.494318181818182,0,1,1,1,1,0,1,0,5,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",35.07,20.28,0,0,0,"NA",87,87,176,0.494318181818182,"NA","NA","NA","low bq"]
["Validated with independent analysis","UPN_Te4_019",3,128204951,"C","T","GATA2","ENST00000341105","missense_variant","Gcc/Acc|p.Ala164Thr/c.490G>A",84,133,221,0.601809954751131,1,1,1,1,1,1,1,0,7,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",35.27,21.33,0,6,6,1,84,127,215,0.590697674418605,"NA","NA","NA","low bq"]
["Validated with independent analysis","UPN_Te4_021",3,128204951,"C","T","GATA2","ENST00000341105","missense_variant","Gcc/Acc|p.Ala164Thr/c.490G>A",151,214,366,0.584699453551913,0,1,1,1,1,0,1,0,5,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.89,20.84,0,0,0,"NA",151,214,366,0.584699453551913,"NA","NA","NA","low bq"]
["Validated with independent analysis","UPN_Te4_022",19,33792731,"G","GGCGGGT","CEBPA","ENST00000498907","inframe_insertion","ccg/cACCCGCcg|p.His195_Pro196dup/c.584_589dupACCCGC",44,22,44,"0.5","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","32.5","NA",22,11,22,"0.5",22,11,22,"0.5","NA","NA","NA","Cov too low"]
[{"$nulls":14},{"$f":"SUM(O2:O6)","v":3},{"$f":"SUM(P2:P6)","v":5},{"$f":"SUM(Q2:Q6)","v":5},{"$f":"SUM(R2:R6)","v":5},{"$f":"SUM(S2:S6)","v":5},{"$f":"SUM(T2:T6)","v":2},{"$f":"SUM(U2:U6)","v":5},{"$f":"SUM(V2:V6)","v":0}]

{"sheet":"FP Mutations","index":5,"n_rows":81,"n_cols":50,"rows_kept":81,"cut":false,"hidden":false,"merged":[]}
["Artifact because...","Sample","Chr","Pos","Ref","Alt","Gene","ENST","Type","Mutation","Nr_Ref","Nr_Alt","DP","VAF","GATK","Platypus","VarScan","LoFreq","FreeBayes","SNVer","SAMtools","VarDict","Called","ESP6500","G1000","Cosmic","Cosmic_location","Cosmic_occurence","dbSNP_SNPs","dbSNP_SNVs","PM_flag","ExAC","ClinVar_clinical","ClinVar_noimpact","provean_score","prediction","BQ_Ref","BQ_Alt","Nr_Ref_fwd","Nr_Alt_fwd","DP_fwd","VAF_fwd","Nr_Ref_rev","Nr_Alt_rev","DP_rev","VAF_rev","strandbias","nr_samples","nr_samples_similar","Category"]
["Inspected, low nr alt, tolerated prediction but VAF too low","UPN_Te4_007",1,36932199,"C","T","CSF3R","ENST00000373103","missense_variant","gGc/gAc|p.Gly784Asp/c.2351G>A",1016,29,1047,0.0276981852913085,0,0,0,1,1,0,0,1,3,"NO","NO","COSM680888","lung",1,"NO","NO","NO","NO","NO","NO",-0.127,"Tolerated",34.72,35.72,1011,29,1042,0.027831094049904,5,0,5,0,1,1,1,"Probably True (-1)"]
["Inspected, low nr alt, low bq","UPN_Te4_015",1,36932215,"A","T","CSF3R","ENST00000373103","missense_variant","Tat/Aat|p.Tyr779Asn/c.2335T>A",1174,29,1207,0.024026512013256,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.792,"Deleterious",30.94,29.28,593,14,609,0.0229885057471264,581,15,598,0.0250836120401338,0.852633109688855,1,1,"Probably True (-3)"]
["Inspected, tolerated prediction but VAF too low","UPN_Te4_002",1,36932236,"C","T","CSF3R","ENST00000373103","missense_variant","Ggc/Agc|p.Gly772Ser/c.2314G>A",1749,59,1813,0.0325427468284611,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.29,"Tolerated",30.58,30.8,885,28,914,0.0306345733041575,864,31,899,0.0344827586206897,0.692028773924135,2,3,"Probably True (-1)"]
["Inspected, low nr alt","UPN_Te4_002",1,36932271,"G","T","CSF3R","ENST00000373103","missense_variant","cCa/cAa|p.Pro760Gln/c.2279C>A",901,20,922,0.0216919739696312,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.772,"Tolerated",34.64,30.1,14,0,14,0,887,20,908,0.0220264317180617,1,1,1,"Probably True (-1)"]
["Inspected","UPN_Te4_002",1,115258744,"C","T","NRAS","ENST00000369535","missense_variant","gGt/gAt|p.Gly13Asp/c.38G>A",24539,250,24862,0.0100555063953021,0,0,0,1,1,0,0,1,3,"NO","NO","COSM573","endometrium, haematopoietic_and_lymphoid_tissue, large_intestine, NS, skin, thyroid, upper_aerodigestive_tract","1, 217, 10, 278, 26, 1, 2","NO","rs121434596","YES",8.236E-006,"NO","NO",-5.441,"Deleterious",34.97,34.81,24539,250,24862,0.0100555063953021,0,0,0,"NA",1,2,2,"Hotspot (-4)"]
["Inspected, low bq","UPN_Te4_011",1,115258745,"C","A","NRAS","ENST00000369535","missense_variant","Ggt/Tgt|p.Gly13Cys/c.37G>T",29475,461,29996,0.0153687158287772,0,0,0,1,1,0,0,1,3,"NO","NO","COSM570","haematopoietic_and_lymphoid_tissue, large_intestine, skin, thyroid","26, 2, 4, 2","NO","rs121434595","YES","NO","NO","NO",-7.663,"Deleterious",33.22,27.36,29475,461,29996,0.0153687158287772,0,0,0,"NA",1,2,2,"Hotspot (-4)"]
["Inspected","UPN_Te4_006",1,115258748,"C","T","NRAS","ENST00000369535","missense_variant","Ggt/Agt|p.Gly12Ser/c.34G>A",22932,259,23246,0.0111417017981588,0,0,0,1,1,0,0,1,3,"NO","NO","COSM563","haematopoietic_and_lymphoid_tissue, large_intestine, lung, ovary, prostate, skin, soft_tissue, upper_aerodigestive_tract","110, 6, 3, 1, 6, 13, 1, 21","NO","rs121913250","YES","NO","NO","NO",-4.621,"Deleterious",34.86,33.98,22932,259,23246,0.0111417017981588,0,0,0,"NA",1,3,3,"Hotspot (-4)"]
["Inspected","UPN_Te4_007",1,115258748,"C","T","NRAS","ENST00000369535","missense_variant","Ggt/Agt|p.Gly12Ser/c.34G>A",28992,308,29382,0.0104826083997005,0,0,0,1,1,0,0,1,3,"NO","NO","COSM563","haematopoietic_and_lymphoid_tissue, large_intestine, lung, ovary, prostate, skin, soft_tissue, upper_aerodigestive_tract","110, 6, 3, 1, 6, 13, 1, 21","NO","rs121913250","YES","NO","NO","NO",-4.621,"Deleterious",34.73,34.52,28992,308,29382,0.0104826083997005,0,0,0,"NA",1,3,3,"Hotspot (-4)"]
["Inspected, tolerated prediction but VAF too low","UPN_Te4_007",2,25497883,"G","A","DNMT3A","ENST00000264709","missense_variant","aCc/aTc|p.Thr189Ile/c.566C>T",4764,134,4906,0.0273134936812067,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.108,"Tolerated",34.36,32.78,2366,67,2438,0.0274815422477441,2398,67,2468,0.0271474878444084,1,1,1,"Probably True (-1)"]
["Inspected, low nr alt, low bq","UPN_Te4_008",3,128204863,"G","A","GATA2","ENST00000341105","missense_variant","cCa/cTa|p.Pro193Leu/c.578C>T",381,22,404,0.0544554455445545,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.247,"Tolerated",33.9,28.59,258,14,273,0.0512820512820513,123,8,131,0.0610687022900763,0.815271867975279,1,1,"Probably True (-2)"]
["Inspected, tolerated prediction but VAF too low","UPN_Te4_013",4,106157791,"G","T","TET2","ENST00000380013","stop_gained","Gga/Tga|p.Gly898*/c.2692G>T",17763,912,18709,0.0487465925490406,0,0,0,0,1,1,0,0,2,"NO","NO","COSM87108","haematopoietic_and_lymphoid_tissue",3,"NO","NO","NO","NO","NO","NO","NA","NA",35.09,35.31,6353,5,6372,0.000784682988072819,11410,907,12337,0.0735186836345951,2,1,1,"Probably True (-1)"]
["Inspected","UPN_Te4_016",4,106164913,"C","T","TET2","ENST00000380013","missense_variant","Cgc/Tgc|p.Arg1261Cys/c.3781C>T",8462,90,8579,0.010490733185686,0,0,0,1,1,0,0,1,3,"NO","NO","COSM87130","haematopoietic_and_lymphoid_tissue",10,"NO","NO","NO","NO","NO","NO",-7.323,"Deleterious",34.81,33.48,0,0,0,"NA",8462,90,8579,0.010490733185686,1,1,1,"Probably True (-1)"]
["Inspected, tolerated prediction but VAF too low","UPN_Te4_013",4,106196220,"C","G","TET2","ENST00000380013","stop_gained","tCa/tGa|p.Ser1518*/c.4553C>G",6244,168,6431,0.0261234644689784,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",31.45,32.1,3162,82,3254,0.02519975414874,3082,86,3177,0.0270695624803274,0.640118177312726,1,1,"Probably True (-2)"]
["Inspected, tolerated prediction but VAF too low","UPN_Te4_008",7,50444410,"A","ACTTT","IKZF1","ENST00000331340","frameshift_variant","aac/aCTTTac|p.Asn114fs/c.340_341insCTTT",27030,1903,27253,0.0698271749899094,1,1,0,0,1,1,0,1,5,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.2,"NA",6326,0,6354,0,20704,1903,20899,0.0910569883726494,2,2,2,"Probably True (-2)"]
["Inspected, low nr alt","UPN_Te4_003",7,50467763,"C","T","IKZF1","ENST00000331340","missense_variant","aCg/aTg|p.Thr333Met/c.998C>T",2283,34,2318,0.0146678170836928,0,0,0,1,1,0,0,1,3,"NO","NO","COSM1210464","large_intestine",1,"NO","NO","NO","NO","NO","NO",-3.142,"Deleterious",34.88,32.26,0,0,0,"NA",2283,34,2318,0.0146678170836928,1,1,1,"Probably True (-1)"]
["Inspected","UPN_Te4_008",7,50467921,"C","A","IKZF1","ENST00000331340","missense_variant","Cgc/Agc|p.Arg386Ser/c.1156C>A",5126,111,5248,0.0211509146341463,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-4.25,"Deleterious",34.46,30.61,2554,56,2615,0.021414913957935,2572,55,2633,0.0208887200911508,0.923765513155185,1,1,"Probably True (-3)"]
["Inspected","UPN_Te4_015",7,50468033,"G","A","IKZF1","ENST00000331340","missense_variant","cGc/cAc|p.Arg423His/c.1268G>A",8739,102,8848,0.0115280289330922,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.354,"Deleterious",35.22,35.19,6423,35,6463,0.00541544174531951,2316,67,2385,0.0280922431865828,2,2,2,"Probably True (-2)"]
["Inspected, low nr alt","UPN_Te4_008",7,101747727,"C","T","CUX1","ENST00000292535","missense_variant","gCa/gTa|p.Ala173Val/c.518C>T",438,34,472,0.0720338983050847,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.707,"Deleterious",32.92,33.18,0,0,0,"NA",438,34,472,0.0720338983050847,1,1,1,"Probably True (-1)"]
["Inspected, low nr alt, tolerated prediction but VAF too low, low bq","UPN_Te4_008",7,101891981,"G","A","CUX1","ENST00000292535","missense_variant","Gga/Aga|p.Gly1393Arg/c.4177G>A",360,30,391,0.0767263427109974,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.015,"Tolerated",31.84,25.17,176,14,191,0.0732984293193717,184,16,200,0.08,0.851234571114171,1,1,"Probably True (-1)"]
["Inspected, low nr alt","UPN_Te4_014",7,101892253,"C","A","CUX1","ENST00000292535","missense_variant","aaC/aaA|p.Asn1483Lys/c.4449C>A",1604,21,1628,0.0128992628992629,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.059,"Deleterious",35.46,34.24,1582,21,1606,0.0130759651307597,22,0,22,0,2,2,2,"Probably True (-1)"]
["Inspected, tolerated prediction but VAF too low","UPN_Te4_014",7,148544318,"G","A","EZH2","ENST00000320356","stop_gained","Cga/Tga|p.Arg25*/c.73C>T",14616,755,15498,0.0487159633501097,0,0,0,1,1,1,0,1,4,"NO","NO","COSM53003","haematopoietic_and_lymphoid_tissue",1,"NO","NO","NO","NO","NO","NO","NA","NA",30.59,32.85,7381,386,7828,0.0493101686254471,7235,369,7670,0.048109517601043,0.765272393151631,1,1,"Probably True (-3)"]
["Inspected, low nr alt","UPN_Te4_008",8,117870624,"C","T","RAD21","ENST00000297338","missense_variant","Ggg/Agg|p.Gly150Arg/c.448G>A",654,22,677,0.0324963072378139,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.53,"Deleterious",34.64,31,0,0,0,"NA",654,22,677,0.0324963072378139,1,1,1,"Probably True (-2)"]
["Inspected, low nr alt","UPN_Te4_008",9,21971152,"T","C","CDKN2A","ENST00000498124","missense_variant","gAg/gGg|p.Glu69Gly/c.206A>G",2441,27,2479,0.0108914885034288,0,0,0,1,1,0,0,1,3,0.0118,"NO","NO","NA","NA","NO","rs372670098","NO",8.404E-006,"NO","NO",-3.049,"Deleterious",34.38,35.7,2441,27,2479,0.0108914885034288,0,0,0,"NA",1,1,1,"Probably True (-1)"]
["Inspected, low bq","UPN_Te4_018",9,139391995,"A","C","NOTCH1","ENST00000277541","missense_variant","Ttt/Gtt|p.Phe2066Val/c.6196T>G",189,50,241,0.20746887966805,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.742,"Deleterious",19.26,15.22,1,0,1,0,188,50,240,0.208333333333333,1,3,3,"Probably True (-1)"]
["Inspected, low nr alt, tolerated prediction but VAF too low","UPN_Te4_008",10,112356263,"G","A","SMC3","ENST00000361804","missense_variant","Gaa/Aaa|p.Glu691Lys/c.2071G>A",600,34,635,0.0535433070866142,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.379,"Tolerated",33.77,35.88,301,17,318,0.0534591194968553,299,17,317,0.0536277602523659,1,1,1,"Probably True (-1)"]
["Inspected","UPN_Te4_010",11,533866,"A","T","HRAS","ENST00000417302","missense_variant","Tac/Aac|p.Tyr64Asn/c.190T>A",4364,101,4474,0.0225748770675011,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-8.394,"Deleterious",35.43,35.49,1600,49,1654,0.0296251511487303,2764,52,2820,0.0184397163120567,2,2,2,"Probably True (-1)"]
["Inspected","UPN_Te4_014",11,533874,"T","A","HRAS","ENST00000417302","missense_variant","cAg/cTg|p.Gln61Leu/c.182A>T",7539,98,7743,0.0126565930517887,0,0,0,0,1,1,0,1,3,"NO","NO","COSM99664, COSM498","breast, liver, oesophagus, skin, upper_aerodigestive_tract, urinary_tract, lung, penis, prostate, salivary_gland, thyroid","2, 2, 3, 85, 18, 28, 6, 1, 18, 4, 3","NO","rs121913233","YES","NO","NO","NO",-6.339,"Deleterious",35.57,34.35,2048,6,2062,0.002909796314258,5491,92,5681,0.0161943319838057,2,2,7,"Probably True (-1)"]
["Inspected, low nr alt","UPN_Te4_008",11,534289,"C","T","HRAS","ENST00000417302","missense_variant","Ggc/Agc|p.Gly12Ser/c.34G>A",3268,34,3303,0.010293672419013,0,0,0,1,1,0,0,1,3,"NO","NO","COSM480, COSM1746299","bone, cervix, large_intestine, penis, prostate, salivary_gland, skin, soft_tissue, thyroid, upper_aerodigestive_tract, urinary_tract, vulva","2, 7, 1, 1, 1, 1, 14, 6, 4, 38, 17, 5","NO","rs104894229","YES","NO","NO","NO",-4.657,"Deleterious",34.52,34.5,3268,34,3303,0.010293672419013,0,0,0,"NA",1,1,1,"Probably True (-2)"]
["Inspected, tolerated prediction but VAF too low","UPN_Te4_007",11,118307496,"C","T","KMT2A","ENST00000389506","missense_variant","tCg/tTg|p.Ser90Leu/c.269C>T",117,35,152,0.230263157894737,1,1,1,1,1,1,0,1,7,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.447,"Tolerated",34.92,33.46,0,0,0,"NA",117,35,152,0.230263157894737,1,1,1,"Probably True (-4)"]
["Inspected, tolerated prediction but VAF too low","UPN_Te4_011",11,118343178,"A","G","KMT2A","ENST00000389506","missense_variant","gAc/gGc|p.Asp435Gly/c.1304A>G",37010,3058,40458,0.0755845568243611,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.96,"Tolerated",30.16,31.66,18789,1572,20523,0.0765969887443356,18221,1486,19935,0.0745422623526461,0.498187373191435,1,1,"Probably True (-1)"]
["Inspected, low bq","UPN_Te4_011",11,119148931,"G","T","CBL","ENST00000264033","missense_variant","tGt/tTt|p.Cys384Phe/c.1151G>T",31150,1304,32535,0.0400799139388351,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-10.273,"Deleterious",32.05,28.6,15583,717,16345,0.0438666258794738,15567,587,16190,0.0362569487337863,0.000454299867085128,1,1,"Probably True (-3)"]
["Inspected","UPN_Te4_002",13,28592641,"T","A","FLT3","ENST00000241453","missense_variant","gAt/gTt|p.Asp835Val/c.2504A>T",28502,613,29592,0.0207150581238172,0,0,0,1,1,0,0,1,3,"NO","NO","COSM784","haematopoietic_and_lymphoid_tissue",51,"NO","NO","NO","NO","NO","NO",-7.907,"Deleterious",35.08,31.34,28467,613,29556,0.020740289619705,35,0,36,0,1,1,2,"Hotspot (-5)"]
["Inspected","UPN_Te4_002",13,28592641,"T","G","FLT3","ENST00000241453","missense_variant","gAt/gCt|p.Asp835Ala/c.2504A>C",28502,396,29592,0.01338199513382,0,0,0,1,1,0,0,1,3,"NO","NO","COSM27650","haematopoietic_and_lymphoid_tissue",3,"NO","NO","NO","NO","NO","NO",-6.981,"Deleterious",35.08,35.19,28467,396,29556,0.0133982947624848,35,0,36,0,1,1,2,"Hotspot (-3)"]
["Inspected","UPN_Te4_010",17,7574013,"G","T","TP53","ENST00000269305","missense_variant","ttC/ttA|p.Phe338Leu/c.1014C>A",7842,105,7951,0.0132058860520689,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.99,"Deleterious",34.79,32.61,3946,50,3998,0.0125062531265633,3896,55,3953,0.0139134834303061,0.623749839599611,1,1,"Probably True (-1)"]
["Inspected, low bq","UPN_Te4_007",17,7578502,"A","T","TP53","ENST00000269305","missense_variant","gTg/gAg|p.Val143Glu/c.428T>A",12541,353,12952,0.0272544780728845,0,0,0,1,1,0,0,1,3,"NO","NO","COSM3522708, COSM3522705, COSM45382, COSM3522707, COSM3522706","oesophagus, skin, breast, large_intestine, lung, upper_aerodigestive_tract, urinary_tract","5, 5, 1, 1, 1, 1, 1","NO","NO","NO","NO","NO","NO",-5.68,"Deleterious",32.69,28.76,19,135,156,0.865384615384615,12522,218,12796,0.0170365739293529,1.96305632471651E-200,6,6,"Probably True (-1)"]
["Inspected, low nr alt","UPN_Te4_007",19,33793134,"C","T","CEBPA","ENST00000498907","missense_variant","Gac/Aac|p.Asp63Asn/c.187G>A",644,28,674,0.0415430267062315,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.568,"Deleterious",33.75,32.11,644,28,674,0.0415430267062315,0,0,0,"NA",1,1,1,"Probably True (-2)"]
["Inspected, low nr alt","UPN_Te4_010",20,31022365,"T","C","ASXL1","ENST00000375687","missense_variant","aTt/aCt|p.Ile617Thr/c.1850T>C",2074,22,2102,0.0104662226450999,0,0,0,1,1,0,0,1,3,"NO","NO","COSM133585","haematopoietic_and_lymphoid_tissue",1,"NO","NO","NO","NO","NO","NO",-3.486,"Deleterious",34.01,31.55,1069,11,1085,0.0101382488479263,1005,11,1017,0.0108161258603736,1,1,1,"Probably True (-1)"]
["Inspected","UPN_Te4_010",20,31025088,"G","A","ASXL1","ENST00000375687","missense_variant","Gat/Aat|p.Asp1525Asn/c.4573G>A",4199,51,4254,0.0119887165021157,0,0,0,1,1,0,0,1,3,0.0116,"NO","NO","NO","O","NO","rs139397200","NO","NO","NO","NO",-4.189,"Deleterious",34.98,35.06,4199,51,4254,0.0119887165021157,0,0,0,"NA",1,1,1,"Probably True (-1)"]
["Inspected, low bq","UPN_Te4_011",21,36164610,"T","A","RUNX1","ENST00000437180","missense_variant","gAg/gTg|p.Glu422Val/c.1265A>T",793,270,2675,0.100934579439252,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-4.606,"Deleterious",19.15,15.06,793,270,2675,0.100934579439252,0,0,0,"NA",1,2,3,"Probably True (-1)"]
["Inspected","UPN_Te4_004",21,36206815,"G","A","RUNX1","ENST00000437180","missense_variant","Cgc/Tgc|p.Arg233Cys/c.697C>T",3967,149,4128,0.0360949612403101,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-3.76,"Deleterious",33.02,34.97,1994,75,2076,0.0361271676300578,1973,74,2052,0.0360623781676413,1,2,2,"Probably True (-1)"]
["Inspected","UPN_Te4_007",21,36206815,"G","A","RUNX1","ENST00000437180","missense_variant","Cgc/Tgc|p.Arg233Cys/c.697C>T",5842,150,5997,0.0250125062531266,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-3.76,"Deleterious",33.07,35.07,2932,76,3010,0.0252491694352159,2910,74,2987,0.024774020756612,0.93421309004385,2,2,"Probably True (-1)"]
["Inspected, tolerated prediction but VAF too low","UPN_Te4_010","X",15809133,"T","C","ZRSR2","ENST00000307771","missense_variant","Tca/Cca|p.Ser40Pro/c.118T>C",2031,67,2116,0.0316635160680529,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.9,"Tolerated",31.83,31.46,1021,35,1070,0.0327102803738318,1010,32,1046,0.0305927342256214,0.804386010258273,1,1,"Probably True (-1)"]
["Inspected","UPN_Te4_014","X",15821883,"G","T","ZRSR2","ENST00000307771","missense_variant","aaG/aaT|p.Lys92Asn/c.276G>T",1423,40,1464,0.0273224043715847,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.11,"Tolerated",33.16,32.3,722,20,743,0.0269179004037685,701,20,721,0.0277392510402219,1,1,1,"Probably True (-2)"]
["Inspected","UPN_Te4_007","X",15821909,"A","G","ZRSR2","ENST00000307771","missense_variant","gAa/gGa|p.Glu101Gly/c.302A>G",3534,58,3598,0.0161200667037243,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.36,"Deleterious",35.12,33.72,1774,29,1805,0.0160664819944598,1760,29,1793,0.0161740100390407,1,1,1,"Probably True (-1)"]
["Inspected","UPN_Te4_007","X",39911588,"C","T","BCOR","ENST00000378444","missense_variant","cGc/cAc|p.Arg1681His/c.5042G>A",1820,40,1865,0.0214477211796247,0,0,0,1,1,0,0,1,3,0,"NO","NO","NO","O","NO","rs372913827","NO",8.237E-006,"NO","NO",-2.339,"Tolerated",34.81,34.88,1820,40,1865,0.0214477211796247,0,0,0,"NA",1,1,1,"Probably True (-2)"]
["Inspected","UPN_Te4_010","X",39911598,"G","A","BCOR","ENST00000378444","missense_variant","Cgc/Tgc|p.Arg1678Cys/c.5032C>T",3921,41,3975,0.010314465408805,0,0,0,1,1,0,0,1,3,"NO","NO","COSM1599462","endometrium, large_intestine","1, 1","NO","NO","NO",8.237E-006,"NO","NO",-6.272,"Deleterious",30.39,32.85,1953,22,1980,0.0111111111111111,1968,19,1995,0.00952380952380952,0.641309083410395,1,1,"Probably True (-1)"]
["Inspected","UPN_Te4_011","X",39911628,"C","A","BCOR","ENST00000378444","missense_variant","Gat/Tat|p.Asp1668Tyr/c.5002G>T",3282,86,3373,0.0254965905721909,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-8.174,"Deleterious",32.96,32.07,1623,45,1671,0.0269299820466786,1659,41,1702,0.0240893066980024,0.662434421852767,1,1,"Probably True (-3)"]
["Inspected","UPN_Te4_007","X",39916489,"C","T","BCOR","ENST00000378444","missense_variant","tGt/tAt|p.Cys1505Tyr/c.4514G>A",2684,48,2738,0.0175310445580716,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-9.563,"Deleterious",33.56,33.75,1361,25,1386,0.018037518037518,1323,23,1352,0.0170118343195266,0.885017130047319,1,1,"Probably True (-1)"]
["Inspected","UPN_Te4_001","X",39922052,"T","C","BCOR","ENST00000378444","missense_variant","Agg/Ggg|p.Arg1374Gly/c.4120A>G",3558,45,3623,0.0124206458735854,0,0,0,1,1,0,0,1,3,"NO","NO","COSM4665526","large_intestine",1,"NO","NO","NO","NO","NO","NO",-3.646,"Deleterious",34.12,34.71,3558,45,3623,0.0124206458735854,0,0,0,"NA",1,1,1,"Probably True (-1)"]
["Inspected, low nr alt","UPN_Te4_010","X",39922900,"A","G","BCOR","ENST00000378444","missense_variant","Tgg/Cgg|p.Trp1270Arg/c.3808T>C",2391,26,2421,0.0107393638992152,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO",8.237E-006,"NO","NO",-4.388,"Deleterious",33.89,33.65,2391,26,2421,0.0107393638992152,0,0,0,"NA",1,1,1,"Probably True (-1)"]
["Inspected, low nr alt","UPN_Te4_015","X",39922927,"T","C","BCOR","ENST00000378444","missense_variant","Agg/Ggg|p.Arg1261Gly/c.3781A>G",2407,25,2464,0.0101461038961039,0,0,0,1,1,0,0,1,3,"NO","NO","COSM3372257","thyroid",1,"NO","NO","NO","NO","NO","NO",-3.381,"Deleterious",33.85,33,2407,25,2464,0.0101461038961039,0,0,0,"NA",1,1,1,"Probably True (-1)"]
["Inspected, low nr alt, tolerated prediction but VAF too low","UPN_Te4_008","X",39931886,"G","T","BCOR","ENST00000378444","missense_variant","Ctg/Atg|p.Leu905Met/c.2713C>A",870,20,890,0.0224719101123595,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.008,"Tolerated",34.98,34.9,431,10,441,0.0226757369614512,439,10,449,0.022271714922049,1,1,1,"Probably True (-1)"]
["Inspected, low nr alt, tolerated prediction but VAF too low","UPN_Te4_018","X",39931912,"A","G","BCOR","ENST00000378444","missense_variant","gTc/gCc|p.Val896Ala/c.2687T>C",950,23,981,0.0234454638124363,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.06,"Tolerated",32.28,35.48,462,12,479,0.0250521920668058,488,11,502,0.0219123505976096,0.833917602381659,1,1,"Probably True (-1)"]
["Inspected, low nr alt, tolerated prediction but VAF too low","UPN_Te4_005","X",39931913,"C","T","BCOR","ENST00000378444","missense_variant","Gtc/Atc|p.Val896Ile/c.2686G>A",603,28,631,0.0443740095087163,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.426,"Tolerated",34.76,34.36,300,14,314,0.0445859872611465,303,14,317,0.0441640378548896,1,1,1,"Probably True (-1)"]
["Inspected, low nr alt","UPN_Te4_004","X",39933803,"T","A","BCOR","ENST00000378444","missense_variant","Agg/Tgg|p.Arg266Trp/c.796A>T",863,20,884,0.0226244343891403,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.72,"Deleterious",32.45,33.45,390,10,400,0.025,473,10,484,0.0206611570247934,0.820975344621167,1,1,"Probably True (-3)"]
["Inspected","UPN_Te4_008","X",39933823,"G","A","BCOR","ENST00000378444","missense_variant","tCg/tTg|p.Ser259Leu/c.776C>T",1124,48,1174,0.0408858603066439,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.635,"Deleterious",34.31,34.48,336,24,360,0.0666666666666667,788,24,814,0.0294840294840295,0.00589715421523927,1,1,"Probably True (-2)"]
["Inspected, low nr alt","UPN_Te4_001","X",39937122,"G","A","BCOR","ENST00000378444","missense_variant","Cgc/Tgc|p.Arg21Cys/c.61C>T",1798,27,1828,0.0147702407002188,0,0,0,1,1,0,0,1,3,"NO","NO","COSM457496, COSM4813253","breast",2,"NO","NO","NO","NO","NO","NO",-3.802,"Deleterious",34.94,33.41,1798,27,1828,0.0147702407002188,0,0,0,"NA",1,1,1,"Probably True (-1)"]
["Inspected, low nr alt","UPN_Te4_007","X",44732805,"C","T","KDM6A","ENST00000377967","missense_variant","tCc/tTc|p.Ser3Phe/c.8C>T",1723,33,1757,0.0187820147979511,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO",8.295E-006,"NO","NO",-3.523,"Deleterious",35.7,35.33,1723,33,1757,0.0187820147979511,0,0,0,"NA",1,1,1,"Probably True (-1)"]
["Inspected, low bq","UPN_Te4_008","X",44918299,"G","T","KDM6A","ENST00000377967","missense_variant","agG/agT|p.Arg308Ser/c.924G>T",3216,69,3292,0.0209599027946537,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.657,"Deleterious",29.46,26.54,1441,26,1471,0.017675050985724,1775,43,1821,0.0236133992311917,0.27128732512133,1,1,"Probably True (-3)"]
["Inspected","UPN_Te4_010","X",44941836,"A","G","KDM6A","ENST00000377967","missense_variant","Aga/Gga|p.Arg1054Gly/c.3160A>G",2990,67,3059,0.0219025825433148,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.625,"Deleterious",35.78,34.78,2990,67,3059,0.0219025825433148,0,0,0,"NA",1,2,2,"Probably True (-1)"]
["Inspected","UPN_Te4_001","X",76845405,"A","C","ATRX","ENST00000373344","missense_variant","gTt/gGt|p.Val2039Gly/c.6116T>G",20549,231,20960,0.0110209923664122,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-6.261,"Deleterious",33.14,30.65,10397,117,10577,0.0110617377328165,10152,114,10383,0.0109794856977752,1,3,3,"Probably True (-1)"]
["Inspected","UPN_Te4_011","X",76845405,"A","C","ATRX","ENST00000373344","missense_variant","gTt/gGt|p.Val2039Gly/c.6116T>G",21311,225,21704,0.0103667526723185,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-6.261,"Deleterious",33.12,32.17,10805,114,10971,0.0103910308996445,10506,111,10733,0.0103419360849716,1,3,3,"Probably True (-1)"]
["Inspected","UPN_Te4_015","X",76845405,"A","C","ATRX","ENST00000373344","missense_variant","gTt/gGt|p.Val2039Gly/c.6116T>G",23834,255,24325,0.0104830421377184,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-6.261,"Deleterious",33.17,32,12069,132,12279,0.0107500610798925,11765,123,12046,0.0102108583762245,0.753025876638816,3,3,"Probably True (-1)"]
["Inspected","UPN_Te4_008","X",76872146,"A","G","ATRX","ENST00000373344","missense_variant","gTg/gCg|p.Val1834Ala/c.5501T>C",3642,54,3712,0.0145474137931034,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.658,"Deleterious",34.29,32.06,1837,27,1868,0.0144539614561028,1805,27,1844,0.0146420824295011,1,1,1,"Probably True (-1)"]
["Inspected, low nr alt, tolerated prediction but VAF too low","UPN_Te4_021","X",76931779,"A","T","ATRX","ENST00000373344","missense_variant","Tct/Act|p.Ser1251Thr/c.3751T>A",1056,26,1082,0.0240295748613678,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.297,"Tolerated",34.99,35.35,534,13,547,0.0237659963436929,522,13,535,0.0242990654205607,1,1,1,"Probably True (-1)"]
["Inspected, low bq","UPN_Te4_013","X",123195624,"T","A","STAG2","ENST00000218089","missense_variant","cTa/cAa|p.Leu513Gln/c.1538T>A",393,112,508,0.220472440944882,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-4.755,"Deleterious",15.52,15.22,393,112,508,0.220472440944882,0,0,0,"NA",1,3,3,"Probably True (-1)"]
["Inspected, low bq","UPN_Te4_015","X",123195641,"A","G","STAG2","ENST00000218089","missense_variant","Agt/Ggt|p.Ser519Gly/c.1555A>G",309,63,425,0.148235294117647,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.213,"Deleterious",15.06,15.05,309,63,425,0.148235294117647,0,0,0,"NA",1,1,1,"Probably True (-1)"]
["Inspected, low nr alt, tolerated prediction but VAF too low","UPN_Te4_008","X",123196767,"G","T","STAG2","ENST00000218089","stop_gained","Gag/Tag|p.Glu552*/c.1654G>T",1228,34,1263,0.0269200316706255,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.26,32.65,1228,34,1263,0.0269200316706255,0,0,0,"NA",1,1,1,"Probably True (-1)"]
["Inspected","UPN_Te4_008","X",123197840,"G","T","STAG2","ENST00000218089","missense_variant","aGt/aTt|p.Ser655Ile/c.1964G>T",2188,45,2233,0.0201522615315719,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.498,"Deleterious",35.13,33.96,0,0,0,"NA",2188,45,2233,0.0201522615315719,1,1,1,"Probably True (-2)"]
["Inspected","UPN_Te4_010","X",123215330,"T","C","STAG2","ENST00000218089","missense_variant","tTt/tCt|p.Phe959Ser/c.2876T>C",8118,92,8230,0.0111786148238153,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-7.423,"Deleterious",33.55,32.23,4098,46,4157,0.0110656723598749,4020,46,4073,0.0112938865700958,1,1,1,"Probably True (-1)"]
["Inspected","UPN_Te4_007","X",123215342,"A","T","STAG2","ENST00000218089","missense_variant","cAg/cTg|p.Gln963Leu/c.2888A>T",4776,89,4901,0.0181595592736176,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-4.231,"Deleterious",32.16,33.73,2410,43,2471,0.0174018615944962,2366,46,2430,0.0189300411522634,0.748522094646533,1,1,"Probably True (-1)"]
["Inspected, low nr alt, tolerated prediction but VAF too low","UPN_Te4_007","X",123224542,"T","C","STAG2","ENST00000218089","missense_variant","tTa/tCa|p.Leu1132Ser/c.3395T>C",1144,29,1174,0.0247018739352641,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.755,"Tolerated",33.92,31.17,571,14,586,0.0238907849829352,573,15,588,0.0255102040816327,1,1,1,"Probably True (-1)"]
["Inspected","UPN_Te4_008","X",123227968,"G","T","STAG2","ENST00000218089","missense_variant","Gat/Tat|p.Asp1227Tyr/c.3679G>T",2950,66,3016,0.0218832891246684,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.81,"Tolerated",33.42,32.61,1488,32,1520,0.0210526315789474,1462,34,1496,0.0227272727272727,0.803960665105158,1,1,"Probably True (-2)"]
["Inspected, tolerated prediction but VAF too low, low bq","UPN_Te4_010","X",129147725,"C","T","BCORL1","ENST00000540052","missense_variant","cCg/cTg|p.Pro326Leu/c.977C>T",2689,56,2753,0.0203414456956048,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO",4.266E-005,"NO","NO",-0.856,"Tolerated",32.39,26.25,1331,28,1364,0.0205278592375367,1358,28,1389,0.0201583873290137,1,1,1,"Probably True (-1)"]
["Inspected","UPN_Te4_002","X",129147852,"TACCCCCACCCTCATCCCCGCCTTTGCTCCTACACCGGTGCCTGCACCCACCCCAGCCCCCATCTTTACTCCAGCCCCT","AAACCCCCCCCCCCCCCTTTTTTTTTTCAAGCAGAAGACGGCATACGAGATTGGATCTGTCGCGAGTTAATGCAACGATCGTCGAAATTCGCCCTTGGTTCTCGCTCCCGTCCCCACTCCGGTTCTG","BCORL1","ENST00000540052","stop_gained+inframe_insertion","tctacccccaccctcatccccgcctttgctcctacaccggtgcctgcacccaccccagcccccatctttactccagcccct/tcAAACCCCCCCCCCCCCCTTTTTTTTTTCAAGCAGAAGACGGCATACGAGATTGGATCTGTCGCGAGTTAATGCAACGATCGTCGAAATTCGCCCTTGGTTCTCGCTCCCGTCCCCACTCCGGTTCTG|p.Thr369_Pro394delinsAsnProProProProLeuPhePhePheLysGlnLysThrAlaTyrGluIleGlySerValAlaSerTerCysAsnAspArgArgAsnSerProLeuValLeuAlaProValProThrProValLeu/c.1104_1182delTACCCCCACCCTCATCCCCGCCTTTGCTCCTACACCGGTGCCTGCACCCACCCCAGCCCCCATCTTTACTCCAGCCCCTinsAAACCCCCCCCCCCCCCTTTTTTTTTTCAAGCAGAAGACGGCATACGAGATTGGATCTGTCGCGAGTTAATGCAACGATCGTCGAAATTCGCCCTTGGTTCTCGCTCCCGTCCCCACTCCGGTTCTG",406,"NA",418,"NA",0,0,0,0,0,0,0,1,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.469,"Deleterious",30.2654430379747,"ComplexIndel","NA","NA","NA","NA","NA","NA","NA","NA",2,1,1,"Probably True (-1)"]
["Inspected","UPN_Te4_005","X",129147898,"CCCACCCCAGCCCCCATCTTTACTCCAGCCCCTACACCCATGCCTGCTG","C","BCORL1","ENST00000540052","disruptive_inframe_deletion","accccagcccccatctttactccagcccctacacccatgcctgctgccacg/acg|p.Pro386_Thr401del/c.1155_1202delCCCAGCCCCCATCTTTACTCCAGCCCCTACACCCATGCCTGCTGCCAC",9299,"NA",9323,"NA",1,0,0,0,0,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.151,"Deleterious",34.93,"NA",9038,"NA",9062,"NA",261,"NA",261,"NA",2,1,1,"Probably True (-1)"]
["Inspected, low nr alt, tolerated prediction but VAF too low","UPN_Te4_008","X",133511756,"C","G","PHF6","ENST00000332070","missense_variant","Cag/Gag|p.Gln37Glu/c.109C>G",1165,30,1195,0.0251046025104603,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.702,"Tolerated",32.44,34.13,590,16,606,0.0264026402640264,575,14,589,0.0237691001697793,0.854142265643528,1,1,"Probably True (-1)"]
["Inspected","UPN_Te4_001","X",133512038,"T","C","PHF6","ENST00000332070","missense_variant","Ttt/Ctt|p.Phe48Leu/c.142T>C",9153,99,9263,0.0106876821764007,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.935,"Deleterious",35.61,35.28,4791,56,4854,0.011536876802637,4362,43,4409,0.00975277840780222,2,2,2,"Probably True (-1)"]
["Inspected, tolerated prediction but VAF too low","UPN_Te4_008","X",133549139,"G","T","PHF6","ENST00000332070","stop_gained","Gga/Tga|p.Gly275*/c.823G>T",7663,447,8118,0.0550628233555063,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",32.97,32.51,3868,206,4078,0.0505149583128985,3795,241,4040,0.0596534653465347,0.0719711513404413,1,1,"Probably True (-2)"]
[{"$nulls":14},{"$f":"SUM(O2:O80)","v":3},{"$f":"SUM(P2:P80)","v":2},{"$f":"SUM(Q2:Q80)","v":1},{"$f":"SUM(R2:R80)","v":71},{"$f":"SUM(S2:S80)","v":77},{"$f":"SUM(T2:T80)","v":40},{"$f":"SUM(U2:U80)","v":0},{"$f":"SUM(V2:V80)","v":73}]

{"sheet":"FP Polymorphisms","index":6,"n_rows":17,"n_cols":50,"rows_kept":17,"cut":false,"hidden":false,"merged":[]}
["Artifact because...","Sample","Chr","Pos","Ref","Alt","Gene","ENST","Type","Mutation","Nr_Ref","Nr_Alt","DP","VAF","GATK","Platypus","VarScan","LoFreq","FreeBayes","SNVer","SAMtools","VarDict","Called","ESP6500","G1000","Cosmic","Cosmic_location","Cosmic_occurence","dbSNP_SNPs","dbSNP_SNVs","PM_flag","ExAC","ClinVar_clinical","ClinVar_noimpact","provean_score","prediction","BQ_Ref","BQ_Alt","Nr_Ref_fwd","Nr_Alt_fwd","DP_fwd","VAF_fwd","Nr_Ref_rev","Nr_Alt_rev","DP_rev","VAF_rev","strandbias","nr_samples","nr_samples_similar","Category"]
["No database, low bq!","UPN_Te4_006",11,118307393,"T","C","KMT2A","ENST00000389506","missense_variant","Tcc/Ccc|p.Ser56Pro/c.166T>C",41,74,324,0.2283950617,0,0,0,1,0,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.616,"Tolerated",16.29,15.43,41,74,324,0.2283950617,0,0,0,"NA",1,9,11,"Polymorphism"]
["No database, low bq!","UPN_Te4_007",11,118307393,"T","C","KMT2A","ENST00000389506","missense_variant","Tcc/Ccc|p.Ser56Pro/c.166T>C",21,51,137,0.3722627737,0,0,0,1,0,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.616,"Tolerated",16.1,15.61,21,51,137,0.3722627737,0,0,0,"NA",1,9,11,"Polymorphism"]
["No database, low bq!","UPN_Te4_008",11,118307393,"T","C","KMT2A","ENST00000389506","missense_variant","Tcc/Ccc|p.Ser56Pro/c.166T>C",6,52,97,0.5360824742,0,1,0,1,1,0,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.616,"Tolerated",16.17,16.65,6,52,97,0.5360824742,0,0,0,"NA",1,9,11,"Polymorphism"]
["No database, low bq!","UPN_Te4_014",11,118307393,"T","C","KMT2A","ENST00000389506","missense_variant","Tcc/Ccc|p.Ser56Pro/c.166T>C",408,1021,3550,0.2876056338,0,0,1,1,0,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.616,"Tolerated",15.48,15.11,408,1021,3550,0.2876056338,0,0,0,"NA",1,9,11,"Polymorphism"]
["No database, low bq!","UPN_Te4_018",11,118307393,"T","C","KMT2A","ENST00000389506","missense_variant","Tcc/Ccc|p.Ser56Pro/c.166T>C",465,1047,3794,0.2759620453,0,0,0,1,0,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.616,"Tolerated",15.91,15.01,464,1047,3793,0.2760348009,1,0,1,0,0.3075396825,9,11,"Polymorphism"]
["Many samples, low bq, identified artifact in other samples","UPN_Te4_001","X",129147949,"A","C","BCORL1","ENST00000540052","missense_variant","Acg/Ccg|p.Thr401Pro/c.1201A>C",2998,1288,4304,0.2992565056,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.784,"Tolerated",20.92,15.11,2188,1288,3492,0.3688430699,810,0,812,0,2,20,20,"Polymorphism"]
["Many samples, low bq, identified artifact in other samples","UPN_Te4_002","X",129147949,"A","C","BCORL1","ENST00000540052","missense_variant","Acg/Ccg|p.Thr401Pro/c.1201A>C",5269,2908,8201,0.3545909035,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.784,"Tolerated",17.28,15.21,4792,2908,7723,0.3765376149,477,0,478,0,2,20,20,"Polymorphism"]
["Many samples, low bq, identified artifact in other samples","UPN_Te4_003","X",129147949,"A","C","BCORL1","ENST00000540052","missense_variant","Acg/Ccg|p.Thr401Pro/c.1201A>C",3438,1825,5279,0.3457094147,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.784,"Tolerated",17.79,15.17,3077,1825,4914,0.3713878714,361,0,365,0,2,20,20,"Polymorphism"]
["Many samples, low bq, identified artifact in other samples","UPN_Te4_004","X",129147949,"A","C","BCORL1","ENST00000540052","missense_variant","Acg/Ccg|p.Thr401Pro/c.1201A>C",3297,2069,5380,0.3845724907,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.784,"Tolerated",16.51,15.18,3120,2069,5203,0.3976551989,177,0,177,0,2,20,20,"Polymorphism"]
["Many samples, low bq, identified artifact in other samples","UPN_Te4_005","X",129147949,"A","C","BCORL1","ENST00000540052","missense_variant","Acg/Ccg|p.Thr401Pro/c.1201A>C",4501,2720,7248,0.3752759382,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.784,"Tolerated",16.84,15.11,4225,2718,6969,0.3900129143,276,2,279,0.0071684588,2,20,20,"Polymorphism"]
["Many samples, low bq, identified artifact in other samples","UPN_Te4_006","X",129147949,"A","C","BCORL1","ENST00000540052","missense_variant","Acg/Ccg|p.Thr401Pro/c.1201A>C",5206,2976,8205,0.3627056673,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.784,"Tolerated",17.05,15.14,4778,2976,7773,0.3828637592,428,0,432,0,2,20,20,"Polymorphism"]
["Many samples, low bq, identified artifact in other samples","UPN_Te4_007","X",129147949,"A","C","BCORL1","ENST00000540052","missense_variant","Acg/Ccg|p.Thr401Pro/c.1201A>C",2517,1338,3870,0.3457364341,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.784,"Tolerated",17.29,15.35,2291,1338,3643,0.3672797145,226,0,227,0,2,20,20,"Polymorphism"]
["Many samples, low bq, identified artifact in other samples","UPN_Te4_008","X",129147949,"A","C","BCORL1","ENST00000540052","missense_variant","Acg/Ccg|p.Thr401Pro/c.1201A>C",8877,4725,13649,0.3461792073,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.784,"Tolerated",18.08,15.15,7748,4723,12514,0.3774172926,1129,2,1135,0.0017621145,2,20,20,"Polymorphism"]
["Many samples, low bq, identified artifact in other samples","UPN_Te4_009","X",129147949,"A","C","BCORL1","ENST00000540052","missense_variant","Acg/Ccg|p.Thr401Pro/c.1201A>C",2281,1343,3630,0.3699724518,0,0,0,0,1,0,1,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.784,"Tolerated",17.17,15.07,2092,1343,3439,0.3905205001,189,0,191,0,2,20,20,"Polymorphism"]
["Many samples, low bq, identified artifact in other samples","UPN_Te4_010","X",129147949,"A","C","BCORL1","ENST00000540052","missense_variant","Acg/Ccg|p.Thr401Pro/c.1201A>C",2506,1418,3936,0.3602642276,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.784,"Tolerated",18,15.16,2253,1418,3683,0.3850122183,253,0,253,0,2,20,20,"Polymorphism"]
[{"$nulls":14},{"$f":"SUM(O1:O16)","v":0},{"$f":"SUM(P1:P16)","v":1},{"$f":"SUM(Q1:Q16)","v":1},{"$f":"SUM(R1:R16)","v":5},{"$f":"SUM(S1:S16)","v":11},{"$f":"SUM(T1:T16)","v":1},{"$f":"SUM(U1:U16)","v":1},{"$f":"SUM(V1:V16)","v":0}]

{"sheet":"TN Mutations Filter 2","index":7,"n_rows":4723,"n_cols":49,"rows_kept":1125,"cut":true,"hidden":false,"merged":[],"bounds":{"rows_first":500,"rows_last":125,"rows_between":500,"halvings":2}}
["Sample","Chr","Pos","Ref","Alt","Gene","ENST","Type","Mutation","Nr_Ref","Nr_Alt","DP","VAF","GATK","Platypus","VarScan","LoFreq","FreeBayes","SNVer","SAMtools","VarDict","Called","ESP6500","G1000","Cosmic","Cosmic_location","Cosmic_occurence","dbSNP_SNPs","dbSNP_SNVs","PM_flag","ExAC","ClinVar_clinical","ClinVar_noimpact","provean_score","prediction","BQ_Ref","BQ_Alt","Nr_Ref_fwd","Nr_Alt_fwd","DP_fwd","VAF_fwd","Nr_Ref_rev","Nr_Alt_rev","DP_rev","VAF_rev","strandbias","nr_samples","nr_samples_similar","Category"]
["UPN_Te4_003",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",8039,143,8234,0.017367014816614,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.958,"Tolerated",21.97,15.13,1,0,1,0,8038,143,8233,0.0173691242560428,1,1,1,"Artifact (5)"]
["UPN_Te4_001",1,36932122,"T","TG","CSF3R","ENST00000373103","frameshift_variant","acc/aCcc|p.Ser810fs/c.2422_2423insC",14463,153,14620,0.0104651162790698,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",30.24,"NA",902,2,910,0.0021978021978022,13561,151,13710,0.0110138584974471,2,6,11,"Artifact (7)"]
["UPN_Te4_006",1,36932122,"T","TG","CSF3R","ENST00000373103","frameshift_variant","acc/aCcc|p.Ser810fs/c.2422_2423insC",12859,135,12973,0.0104062283203577,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",30.21,"NA",1075,3,1086,0.00276243093922652,11784,132,11887,0.0111045680154791,2,6,11,"Artifact (7)"]
["UPN_Te4_011",1,36932122,"T","TG","CSF3R","ENST00000373103","frameshift_variant","acc/aCcc|p.Ser810fs/c.2422_2423insC",14888,184,15049,0.0122267260283075,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",30.59,"NA",1340,3,1348,0.00222551928783383,13548,181,13701,0.0132107145463835,2,6,11,"Artifact (7)"]
["UPN_Te4_014",1,36932122,"T","TG","CSF3R","ENST00000373103","frameshift_variant","acc/aCcc|p.Ser810fs/c.2422_2423insC",16274,172,16418,0.0104763064928737,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",30.67,"NA",1389,6,1394,0.00430416068866571,14885,166,15024,0.01104898828541,2,6,11,"Artifact (7)"]
["UPN_Te4_016",1,36932122,"T","TG","CSF3R","ENST00000373103","frameshift_variant","acc/aCcc|p.Ser810fs/c.2422_2423insC",11304,124,11419,0.0108590944916367,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",30.82,"NA",996,1,1004,0.00099601593625498,10308,123,10415,0.0118098895823332,2,6,11,"Artifact (7)"]
["UPN_Te4_020",1,36932122,"T","TG","CSF3R","ENST00000373103","frameshift_variant","acc/aCcc|p.Ser810fs/c.2422_2423insC",10242,124,10323,0.012012012012012,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",32.84,"NA",609,1,612,0.00163398692810458,9633,123,9711,0.0126660488106271,2,6,11,"Artifact (7)"]
["UPN_Te4_003",1,36932122,"TG","T","CSF3R","ENST00000373103","frameshift_variant","acc/|p.Ser810fs/c.2423delC",8925,94,9034,0.0104051361523135,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.53,"NA",779,7,788,0.00888324873096447,8146,87,8246,0.0105505699733204,2,5,11,"Artifact (6)"]
["UPN_Te4_010",1,36932122,"TG","T","CSF3R","ENST00000373103","frameshift_variant","acc/|p.Ser810fs/c.2423delC",13339,140,13511,0.0103619273184812,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.58,"NA",974,5,979,0.00510725229826353,12365,135,12532,0.0107724225981487,2,5,11,"Artifact (7)"]
["UPN_Te4_013",1,36932122,"TG","T","CSF3R","ENST00000373103","frameshift_variant","acc/|p.Ser810fs/c.2423delC",3905,44,3956,0.0111223458038423,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.46,"NA",268,2,270,0.00740740740740741,3637,42,3686,0.0113944655453066,2,5,11,"Artifact (7)"]
["UPN_Te4_017",1,36932122,"TG","T","CSF3R","ENST00000373103","frameshift_variant","acc/|p.Ser810fs/c.2423delC",5961,63,6032,0.0104442970822281,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.58,"NA",423,1,425,0.00235294117647059,5538,62,5607,0.0110576065632245,2,5,11,"Artifact (7)"]
["UPN_Te4_013",1,36932191,"T","TGGGGCTGCCCAGCAGCTGCCCATAAAGGACCTGATCGCTGGTGCCAGACTGGGATTGGGGCTGGGGGGTGAGGCCCGCCAAGTGTTGCTGTGGGTTGTCACAGCGGAGATCGGGCCCTGGCCGTGTGGGGGG","CSF3R","ENST00000373103","inframe_insertion","ccc/cccCCCCCCACACGGCCAGGGCCCGATCTCCGCTGTGACAACCCACAGCAACACTTGGCGGGCCTCACCCCCCAGCCCCAATCCCAGTCTGGCACCAGCGATCAGGTCCTTTATGGGCAGCTGCTGGGCAGCCCC|p.Pro786_Thr787insProProThrArgProGlyProAspLeuArgCysAspAsnProGlnGlnHisLeuAlaGlyLeuThrProGlnProGlnSerGlnSerGlyThrSerAspGlnValLeuTyrGlyGlnLeuLeuGlySerPro/c.2358_2359insCCCCCCACACGGCCAGGGCCCGATCTCCGCTGTGACAACCCACAGCAACACTTGGCGGGCCTCACCCCCCAGCCCCAATCCCAGTCTGGCACCAGCGATCAGGTCCTTTATGGGCAGCTGCTGGGCAGCCCC",273,"NA",274,"NA",0,0,0,0,0,0,0,1,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-16.737,"Deleterious",34.27,"NA",268,"NA",269,"NA",5,"NA",5,"NA","NA",1,1,"Artifact (0)"]
["UPN_Te4_005",1,36932209,"G","T","CSF3R","ENST00000373103","missense_variant","Cag/Aag|p.Gln781Lys/c.2341C>A",1041,20,1065,0.0187793427230047,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.383,"Tolerated",34.74,32.7,1035,20,1059,0.0188857412653447,6,0,6,0,1,1,1,"Artifact (2)"]
["UPN_Te4_010",1,36932223,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln776Leu/c.2327A>T",1896,24,1933,0.0124159337816865,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.435,"Tolerated",31.95,29.04,960,12,976,0.0122950819672131,936,12,957,0.0125391849529781,1,1,1,"Artifact (4)"]
["UPN_Te4_002",1,36932224,"G","A","CSF3R","ENST00000373103","stop_gained","Cag/Tag|p.Gln776*/c.2326C>T",1787,24,1812,0.0132450331125828,0,0,0,1,1,0,0,1,3,"NO","NO","COSM1724982","haematopoietic_and_lymphoid_tissue",3,"NO","NO","NO","NO","NO","NO","NA","NA",33.77,32.38,905,12,918,0.0130718954248366,882,12,894,0.0134228187919463,1,1,1,"Artifact (0)"]
["UPN_Te4_011",1,36932235,"C","T","CSF3R","ENST00000373103","missense_variant","gGc/gAc|p.Gly772Asp/c.2315G>A",2640,34,2696,0.0126112759643917,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.904,"Tolerated",29.94,27.85,1339,17,1359,0.0125091979396615,1301,17,1337,0.012715033657442,1,1,1,"Artifact (4)"]
["UPN_Te4_018",1,36932236,"C","T","CSF3R","ENST00000373103","missense_variant","Ggc/Agc|p.Gly772Ser/c.2314G>A",2089,22,2118,0.0103871576959396,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.29,"Tolerated",28.95,32.91,1061,11,1072,0.0102611940298507,1028,11,1046,0.0105162523900574,1,2,3,"Artifact (4)"]
["UPN_Te4_007",1,36932236,"CA","C","CSF3R","ENST00000373103","frameshift_variant","tct/|p.Gly772fs/c.2313delT",2016,22,2066,0.010648596321394,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",31.05,"NA",1024,10,1039,0.00962463907603465,992,12,1027,0.0116845180136319,0.672153550083568,1,3,"Artifact (5)"]
["UPN_Te4_011",1,36932244,"G","T","CSF3R","ENST00000373103","missense_variant","tCc/tAc|p.Ser769Tyr/c.2306C>A",1334,26,1361,0.0191036002939015,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.78,"Tolerated",32.83,27.08,19,0,19,0,1315,26,1342,0.0193740685543964,1,1,1,"Artifact (2)"]
["UPN_Te4_010",1,36932248,"G","T","CSF3R","ENST00000373103","missense_variant","Caa/Aaa|p.Gln768Lys/c.2302C>A",941,22,966,0.0227743271221532,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.028,"Tolerated",34.49,28.05,1,0,1,0,940,22,965,0.0227979274611399,1,1,1,"Artifact (0)"]
["UPN_Te4_014",1,36932301,"A","G","CSF3R","ENST00000373103","missense_variant","cTg/cCg|p.Leu750Pro/c.2249T>C",1345,23,1389,0.0165586753059755,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.296,"Tolerated",33.97,32.7,0,0,0,"NA",1345,23,1389,0.0165586753059755,1,1,1,"Artifact (2)"]
["UPN_Te4_010",1,36932358,"T","C","CSF3R","ENST00000373103","missense_variant","aAg/aGg|p.Lys731Arg/c.2192A>G",8426,90,8568,0.0105042016806723,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.459,"Tolerated",33.76,34.5,7458,90,7600,0.0118421052631579,968,0,968,0,2,10,10,"Artifact (6)"]
["UPN_Te4_013",1,36932358,"T","C","CSF3R","ENST00000373103","missense_variant","aAg/aGg|p.Lys731Arg/c.2192A>G",2174,31,2222,0.013951395139514,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.459,"Tolerated",33.78,33.97,1909,31,1956,0.0158486707566462,265,0,266,0,2,10,10,"Artifact (5)"]
["UPN_Te4_014",1,36932358,"T","C","CSF3R","ENST00000373103","missense_variant","aAg/aGg|p.Lys731Arg/c.2192A>G",10553,111,10755,0.0103207810320781,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.459,"Tolerated",33.65,34.12,9168,104,9361,0.0111099241534024,1385,7,1394,0.00502152080344333,2,10,10,"Artifact (2)"]
["UPN_Te4_015",1,36932358,"T","C","CSF3R","ENST00000373103","missense_variant","aAg/aGg|p.Lys731Arg/c.2192A>G",6519,89,6653,0.0133774237186232,0,0,0,1,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.459,"Tolerated",33.83,35.02,5920,86,6051,0.0142125268550653,599,3,602,0.00498338870431894,2,10,10,"Artifact (5)"]
["UPN_Te4_016",1,36932358,"T","C","CSF3R","ENST00000373103","missense_variant","aAg/aGg|p.Lys731Arg/c.2192A>G",7113,84,7251,0.0115846090194456,0,0,0,1,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.459,"Tolerated",33.7,33.88,6124,81,6259,0.0129413644352133,989,3,992,0.0030241935483871,2,10,10,"Artifact (5)"]
["UPN_Te4_017",1,36932358,"T","C","CSF3R","ENST00000373103","missense_variant","aAg/aGg|p.Lys731Arg/c.2192A>G",4144,44,4202,0.0104712041884817,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.459,"Tolerated",34.63,34.73,3721,43,3777,0.0113846968493513,423,1,425,0.00235294117647059,2,10,10,"Artifact (5)"]
["UPN_Te4_021",1,36932358,"T","C","CSF3R","ENST00000373103","missense_variant","aAg/aGg|p.Lys731Arg/c.2192A>G",7461,81,7564,0.0107086197778953,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.459,"Tolerated",34.61,34.51,6613,76,6710,0.0113263785394933,848,5,854,0.00585480093676815,2,10,10,"Artifact (3)"]
["UPN_Te4_022",1,36932358,"T","C","CSF3R","ENST00000373103","missense_variant","aAg/aGg|p.Lys731Arg/c.2192A>G",6474,67,6557,0.0102180875400336,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.459,"Tolerated",34.62,35.22,5843,64,5922,0.01080715974333,631,3,635,0.0047244094488189,2,10,10,"Artifact (5)"]
["UPN_Te4_001",1,36932361,"T","C","CSF3R","ENST00000373103","missense_variant","gAa/gGa|p.Glu730Gly/c.2189A>G",7827,95,7965,0.0119271814187068,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.292,"Tolerated",34.56,31.82,7012,24,7075,0.00339222614840989,815,71,890,0.0797752808988764,2,27,27,"Artifact (4)"]
["UPN_Te4_002",1,36932361,"T","C","CSF3R","ENST00000373103","missense_variant","gAa/gGa|p.Glu730Gly/c.2189A>G",7711,199,7947,0.0250408959355732,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.292,"Tolerated",34.78,32.19,6983,25,7039,0.00355164085807643,728,174,908,0.191629955947137,2,27,27,"Artifact (5)"]
["UPN_Te4_003",1,36932361,"T","C","CSF3R","ENST00000373103","missense_variant","gAa/gGa|p.Glu730Gly/c.2189A>G",5842,168,6039,0.027819175360159,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.292,"Tolerated",34.84,31.82,5222,12,5261,0.0022809351834252,620,156,778,0.200514138817481,2,27,27,"Artifact (5)"]
["UPN_Te4_004",1,36932361,"T","C","CSF3R","ENST00000373103","missense_variant","gAa/gGa|p.Glu730Gly/c.2189A>G",7211,173,7435,0.0232683254875588,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.292,"Tolerated",34.88,31.9,6585,14,6645,0.00210684725357412,626,159,790,0.20126582278481,2,27,27,"Artifact (5)"]
["UPN_Te4_005",1,36932361,"T","C","CSF3R","ENST00000373103","missense_variant","gAa/gGa|p.Glu730Gly/c.2189A>G",7546,239,7804,0.0306253203485392,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.292,"Tolerated",34.82,31.58,6730,18,6766,0.00266036062666273,816,221,1038,0.212909441233141,2,27,27,"Artifact (5)"]
["UPN_Te4_006",1,36932361,"T","C","CSF3R","ENST00000373103","missense_variant","gAa/gGa|p.Glu730Gly/c.2189A>G",7850,223,8108,0.027503700049334,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.292,"Tolerated",34.81,31.74,7000,14,7044,0.00198750709823964,850,209,1064,0.196428571428571,2,27,27,"Artifact (5)"]
["UPN_Te4_007",1,36932361,"T","C","CSF3R","ENST00000373103","missense_variant","gAa/gGa|p.Glu730Gly/c.2189A>G",8182,207,8421,0.0245814036337727,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.292,"Tolerated",34.84,32.01,7348,19,7398,0.00256826169234928,834,188,1023,0.183773216031281,2,27,27,"Artifact (5)"]
["UPN_Te4_008",1,36932361,"T","C","CSF3R","ENST00000373103","missense_variant","gAa/gGa|p.Glu730Gly/c.2189A>G",11011,376,11433,0.0328872561882271,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.292,"Tolerated",34.73,31.53,9636,28,9708,0.00288421920065925,1375,348,1725,0.201739130434783,2,27,27,"Artifact (5)"]
["UPN_Te4_009",1,36932361,"T","C","CSF3R","ENST00000373103","missense_variant","gAa/gGa|p.Glu730Gly/c.2189A>G",4169,84,4270,0.019672131147541,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.292,"Tolerated",34.88,30.9,3813,5,3833,0.00130446125750065,356,79,437,0.180778032036613,2,27,27,"Artifact (7)"]
["UPN_Te4_010",1,36932361,"T","C","CSF3R","ENST00000373103","missense_variant","gAa/gGa|p.Glu730Gly/c.2189A>G",8275,258,8563,0.0301296274670092,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.292,"Tolerated",34.96,31.61,7549,23,7599,0.00302671404132123,726,235,964,0.243775933609959,2,27,27,"Artifact (5)"]
["UPN_Te4_011",1,36932361,"T","C","CSF3R","ENST00000373103","missense_variant","gAa/gGa|p.Glu730Gly/c.2189A>G",9603,170,9839,0.0172781786766948,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.292,"Tolerated",34.41,31.66,8392,38,8491,0.00447532681662937,1211,132,1348,0.0979228486646884,2,27,27,"Artifact (4)"]
["UPN_Te4_013",1,36932361,"T","C","CSF3R","ENST00000373103","missense_variant","gAa/gGa|p.Glu730Gly/c.2189A>G",2177,27,2221,0.0121566861773976,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.292,"Tolerated",34.37,33.04,1931,7,1955,0.00358056265984655,246,20,266,0.075187969924812,2,27,27,"Artifact (5)"]
["UPN_Te4_014",1,36932361,"T","C","CSF3R","ENST00000373103","missense_variant","gAa/gGa|p.Glu730Gly/c.2189A>G",10531,143,10735,0.0133209129017233,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.292,"Tolerated",34.42,32.03,9269,35,9360,0.00373931623931624,1262,108,1375,0.0785454545454545,2,27,27,"Artifact (4)"]
["UPN_Te4_015",1,36932361,"T","C","CSF3R","ENST00000373103","missense_variant","gAa/gGa|p.Glu730Gly/c.2189A>G",6533,82,6651,0.0123289730867539,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.292,"Tolerated",34.55,32.26,5992,21,6049,0.00347164820631509,541,61,602,0.101328903654485,2,27,27,"Artifact (4)"]
["UPN_Te4_016",1,36932361,"T","C","CSF3R","ENST00000373103","missense_variant","gAa/gGa|p.Glu730Gly/c.2189A>G",7117,92,7247,0.0126949082378915,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.292,"Tolerated",34.44,31.76,6205,18,6256,0.0028772378516624,912,74,991,0.0746720484359233,2,27,27,"Artifact (4)"]
["UPN_Te4_018",1,36932361,"T","C","CSF3R","ENST00000373103","missense_variant","gAa/gGa|p.Glu730Gly/c.2189A>G",8790,127,8967,0.0141630422660868,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.292,"Tolerated",34.5,31.95,7839,25,7910,0.00316055625790139,951,102,1057,0.0964995269631031,2,27,27,"Artifact (4)"]
["UPN_Te4_013",1,36932844,"G","T","CSF3R","ENST00000373103","missense_variant","aCa/aAa|p.Thr676Lys/c.2027C>A",1479,25,1508,0.01657824933687,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.758,"Tolerated",35.02,33.64,1479,13,1496,0.00868983957219251,0,12,12,1,1.94311374426362E-023,1,1,"Artifact (4)"]
["UPN_Te4_010",1,36932845,"T","A","CSF3R","ENST00000373103","missense_variant","Aca/Tca|p.Thr676Ser/c.2026A>T",2486,26,2524,0.0103011093502377,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.413,"Tolerated",35.39,32.46,2485,26,2523,0.0103051922314705,1,0,1,0,1,1,1,"Artifact (2)"]
["UPN_Te4_004",1,36932856,"G","A","CSF3R","ENST00000373103","missense_variant","tCc/tTc|p.Ser672Phe/c.2015C>T",1837,21,1858,0.011302475780409,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.185,"Tolerated",34.76,35.43,1819,21,1840,0.0114130434782609,18,0,18,0,1,1,1,"Artifact (2)"]
["UPN_Te4_002",1,36932880,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp664Ala/c.1991A>C",2497,41,2548,0.0160910518053375,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.165,"Deleterious",34.57,35.27,2497,21,2528,0.00830696202531645,0,20,20,1,5.73916142851224E-039,4,4,"Artifact (4)"]
["UPN_Te4_004",1,36932880,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp664Ala/c.1991A>C",1806,38,1857,0.020463112547119,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.165,"Deleterious",34.39,34.84,1806,20,1839,0.0108754758020663,0,18,18,1,3.84457273497074E-033,4,4,"Artifact (2)"]
["UPN_Te4_005",1,36932880,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp664Ala/c.1991A>C",1890,134,2028,0.0660749506903353,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.165,"Deleterious",34.76,34.75,1890,69,1963,0.0351502801833928,0,65,65,1,4.10802700379988E-085,4,4,"Artifact (2)"]
["UPN_Te4_012",1,36932880,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp664Ala/c.1991A>C",2680,28,2719,0.0102979036410445,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.165,"Deleterious",35.41,34.43,2680,15,2706,0.00554323725055432,0,13,13,1,5.69819285058235E-028,4,4,"Artifact (5)"]
["UPN_Te4_005",1,36932902,"G","T","CSF3R","ENST00000373103","missense_variant","Ccc/Acc|p.Pro657Thr/c.1969C>A",3700,55,3757,0.0146393398988555,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.047,"Tolerated",33.6,30.87,1870,24,1896,0.0126582278481013,1830,31,1861,0.0166577109081139,0.34289344517041,1,1,"Artifact (1)"]
["UPN_Te4_001",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",13875,187,14096,0.0132661748013621,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.22,"NA",7815,1,7826,0.000127779197546639,6060,186,6270,0.0296650717703349,2,22,22,"Artifact (9)"]
["UPN_Te4_002",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",11980,372,12370,0.0300727566693614,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.33,"NA",4948,0,4958,0,7032,372,7412,0.0501888828926066,2,22,22,"Artifact (7)"]
["UPN_Te4_003",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",8221,170,8402,0.0202332777910021,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.23,"NA",4181,0,4188,0,4040,170,4214,0.0403417180825819,2,22,22,"Artifact (7)"]
["UPN_Te4_004",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",10858,333,11202,0.0297268344938404,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.33,"NA",4946,1,4955,0.000201816347124117,5912,332,6247,0.0531455098447255,2,22,22,"Artifact (7)"]
["UPN_Te4_005",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",10378,261,10648,0.024511645379414,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.4,"NA",4943,2,4953,0.000403795679386231,5435,259,5695,0.0454784899034241,2,22,22,"Artifact (7)"]
["UPN_Te4_006",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",12317,322,12651,0.0254525333965694,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.36,"NA",5270,0,5277,0,7047,322,7374,0.0436669378898834,2,22,22,"Artifact (7)"]
["UPN_Te4_007",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",14477,369,14870,0.0248150638870208,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.28,"NA",7602,0,7620,0,6875,369,7250,0.0508965517241379,2,22,22,"Artifact (7)"]
["UPN_Te4_008",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",18560,475,19109,0.0248573970380449,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.3,"NA",8821,1,8835,0.000113186191284663,9739,474,10274,0.0461358769709947,2,22,22,"Artifact (7)"]
["UPN_Te4_009",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",6085,200,6293,0.031781344350866,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.4,"NA",2900,0,2904,0,3185,200,3389,0.0590144585423429,2,22,22,"Artifact (7)"]
["UPN_Te4_010",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",12065,217,12317,0.0176179264431274,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.31,"NA",6507,0,6513,0,5558,217,5804,0.0373880082701585,2,22,22,"Artifact (9)"]
["UPN_Te4_011",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",18018,324,18401,0.0176077387098527,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.18,"NA",9818,2,9844,0.000203169443315725,8200,322,8557,0.0376300105177048,2,22,22,"Artifact (9)"]
["UPN_Te4_012",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",7003,190,7204,0.0263742365352582,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.5,"NA",3259,0,3264,0,3744,190,3940,0.0482233502538071,2,22,22,"Artifact (7)"]
["UPN_Te4_013",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",4274,85,4366,0.0194686211635364,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.35,"NA",2234,0,2237,0,2040,85,2129,0.0399248473461719,2,22,22,"Artifact (9)"]
["UPN_Te4_014",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",16881,359,17277,0.02077907044047,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.22,"NA",9524,2,9552,0.000209380234505863,7357,357,7725,0.0462135922330097,2,22,22,"Artifact (7)"]
["UPN_Te4_015",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",12021,304,12351,0.0246133916282082,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.19,"NA",6648,5,6668,0.000749850029994001,5373,299,5683,0.0526130564842513,2,22,22,"Artifact (7)"]
["UPN_Te4_016",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",12496,287,12811,0.0224026227460776,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.22,"NA",7345,2,7367,0.000271480928464775,5151,285,5444,0.0523512123438648,2,22,22,"Artifact (7)"]
["UPN_Te4_017",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",7077,208,7300,0.0284931506849315,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.51,"NA",2639,0,2644,0,4438,208,4656,0.0446735395189003,2,22,22,"Artifact (7)"]
["UPN_Te4_018",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",16496,357,16899,0.0211255103852299,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.21,"NA",9222,0,9243,0,7274,357,7656,0.0466300940438871,2,22,22,"Artifact (7)"]
["UPN_Te4_019",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",5835,105,5956,0.0176292813969107,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.49,"NA",3118,0,3120,0,2717,105,2836,0.0370239774330042,2,22,22,"Artifact (9)"]
["UPN_Te4_020",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",14006,363,14389,0.0252276044200431,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.52,"NA",6187,0,6192,0,7819,363,8197,0.0442844943271929,2,22,22,"Artifact (7)"]
["UPN_Te4_021",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",13877,431,14330,0.0300767620376832,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.48,"NA",7121,0,7125,0,6756,431,7205,0.0598195697432339,2,22,22,"Artifact (7)"]
["UPN_Te4_022",1,36933222,"AG","A","CSF3R","ENST00000373103","frameshift_variant","ggc/|p.Leu632fs/c.1893delC",10152,296,10461,0.028295574036899,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.56,"NA",4661,2,4669,0.000428357249946455,5491,294,5792,0.0507596685082873,2,22,22,"Artifact (7)"]
["UPN_Te4_011",1,115256445,"G","T","NRAS","ENST00000369535","stop_gained","tCa/tAa|p.Ser89*/c.266C>A",1298,20,1323,0.0151171579743008,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.9,33.6,1298,20,1323,0.0151171579743008,0,0,0,"NA",1,1,1,"Artifact (3)"]
["UPN_Te4_008",1,115256467,"A","T","NRAS","ENST00000369535","missense_variant","Ttt/Att|p.Phe82Ile/c.244T>A",403,25,429,0.0582750582750583,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.72,"Deleterious",35.4,34.88,403,25,429,0.0582750582750583,0,0,0,"NA",1,1,1,"Artifact (0)"]
["UPN_Te4_007",1,115256541,"T","A","NRAS","ENST00000369535","missense_variant","gAt/gTt|p.Asp57Val/c.170A>T",902,64,969,0.066047471620227,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-8.57,"Deleterious",31.45,27.28,894,64,961,0.0665972944849116,8,0,8,0,1,1,1,"Artifact (0)"]
["UPN_Te4_001",1,115258733,"T","C","NRAS","ENST00000369535","missense_variant","Agc/Ggc|p.Ser17Gly/c.49A>G",26712,276,27083,0.010190894657165,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.515,"Deleterious",33.33,32.71,26712,276,27083,0.010190894657165,0,0,0,"NA",1,3,3,"Artifact (0)"]
["UPN_Te4_013",1,115258733,"T","C","NRAS","ENST00000369535","missense_variant","Agc/Ggc|p.Ser17Gly/c.49A>G",14085,158,14304,0.0110458612975392,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.515,"Deleterious",33.33,32.97,14085,158,14304,0.0110458612975392,0,0,0,"NA",1,3,3,"Artifact (0)"]
["UPN_Te4_016",1,115258733,"T","C","NRAS","ENST00000369535","missense_variant","Agc/Ggc|p.Ser17Gly/c.49A>G",23781,243,24132,0.0100696171059175,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.515,"Deleterious",33.43,33.14,23781,243,24132,0.0100696171059175,0,0,0,"NA",1,3,3,"Artifact (0)"]
["UPN_Te4_011",2,25462053,"A","T","DNMT3A","ENST00000264709","missense_variant","gTg/gAg|p.Val785Glu/c.2354T>A",23397,245,23862,0.0102673707149443,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.132,"Deleterious",27.7,21.09,11859,63,12066,0.00522128294380905,11538,182,11796,0.0154289589691421,3.50397640369308E-015,1,1,"Artifact (3)"]
["UPN_Te4_001",2,25464517,"A","T","DNMT3A","ENST00000264709","missense_variant","Tgt/Agt|p.Cys666Ser/c.1996T>A",17023,185,17373,0.0106487077649226,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.014,"Deleterious",28.92,27.98,8587,68,8770,0.00775370581527936,8436,117,8603,0.0135999070091828,0.000208586246321295,1,1,"Artifact (3)"]
["UPN_Te4_019",2,25466838,"A","C","DNMT3A","ENST00000264709","missense_variant","gTt/gGt|p.Val622Gly/c.1865T>G",3703,44,3761,0.0116990162190907,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.825,"Deleterious",23.66,17.5,3693,44,3751,0.0117302052785924,10,0,10,0,1,2,2,"Artifact (3)"]
["UPN_Te4_022",2,25466838,"A","C","DNMT3A","ENST00000264709","missense_variant","gTt/gGt|p.Val622Gly/c.1865T>G",6014,66,6105,0.0108108108108108,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.825,"Deleterious",23.65,17.21,6011,66,6102,0.0108161258603736,3,0,3,0,1,2,2,"Artifact (3)"]
["UPN_Te4_002",2,25469031,"C","G","DNMT3A","ENST00000264709","missense_variant","aGa/aCa|p.Arg476Thr/c.1427G>C",15039,228,15337,0.0148660103018843,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.331,"Deleterious",33.35,30.87,7391,220,7648,0.028765690376569,7648,8,7689,0.00104044739237872,5.17935257856204E-056,8,8,"Artifact (6)"]
["UPN_Te4_003",2,25469031,"C","G","DNMT3A","ENST00000264709","missense_variant","aGa/aCa|p.Arg476Thr/c.1427G>C",11711,152,11902,0.0127709628633843,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.331,"Deleterious",33.49,30.45,5491,145,5652,0.025654635527247,6220,7,6250,0.00112,2.16089626942493E-038,8,8,"Artifact (6)"]
["UPN_Te4_004",2,25469031,"C","G","DNMT3A","ENST00000264709","missense_variant","aGa/aCa|p.Arg476Thr/c.1427G>C",10920,121,11070,0.0109304426377597,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.331,"Deleterious",33.56,31.03,4705,118,4837,0.0243952863345049,6215,3,6233,0.000481309160917696,8.62481044439108E-039,8,8,"Artifact (6)"]
["UPN_Te4_005",2,25469031,"C","G","DNMT3A","ENST00000264709","missense_variant","aGa/aCa|p.Arg476Thr/c.1427G>C",14838,188,15046,0.0124950152864549,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.331,"Deleterious",33.51,31,6620,184,6816,0.0269953051643192,8218,4,8230,0.000486026731470231,5.99094413933328E-058,8,8,"Artifact (6)"]
["UPN_Te4_007",2,25469031,"C","G","DNMT3A","ENST00000264709","missense_variant","aGa/aCa|p.Arg476Thr/c.1427G>C",19651,311,19994,0.01555466639992,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.331,"Deleterious",33.22,31.08,10238,302,10561,0.0285957769150649,9413,9,9433,0.000954097317926428,2.44806968999635E-071,8,8,"Artifact (6)"]
["UPN_Te4_008",2,25469031,"C","G","DNMT3A","ENST00000264709","missense_variant","aGa/aCa|p.Arg476Thr/c.1427G>C",24597,327,24980,0.0130904723779023,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.331,"Deleterious",33.39,30.91,11735,321,12080,0.0265728476821192,12862,6,12900,0.000465116279069767,2.59344247548626E-092,8,8,"Artifact (6)"]
["UPN_Te4_009",2,25469031,"C","G","DNMT3A","ENST00000264709","missense_variant","aGa/aCa|p.Arg476Thr/c.1427G>C",7518,135,7666,0.0176102269762588,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.331,"Deleterious",33.4,31.08,3585,132,3724,0.0354457572502685,3933,3,3942,0.00076103500761035,1.13260554774113E-037,8,8,"Artifact (6)"]
["UPN_Te4_010",2,25469031,"C","G","DNMT3A","ENST00000264709","missense_variant","aGa/aCa|p.Arg476Thr/c.1427G>C",16349,272,16699,0.0162884005030241,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.331,"Deleterious",33.26,30.99,8546,270,8884,0.0303917154434939,7803,2,7815,0.000255918106206014,6.26174156619866E-072,8,8,"Artifact (6)"]
["UPN_Te4_001",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",21332,625,22023,0.0283794215138719,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.63,31.55,14192,41,14281,0.00287094741264617,7140,584,7742,0.0754327047274606,2,23,23,"Artifact (6)"]
["UPN_Te4_002",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",13727,1529,15307,0.0998889397007905,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.47,31.64,7641,25,7699,0.00324717495778673,6086,1504,7608,0.197686645636172,2,23,23,"Artifact (6)"]
["UPN_Te4_003",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",10583,1278,11905,0.10734985300294,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.52,31.76,5657,12,5703,0.00210415570752236,4926,1266,6202,0.204127700741696,2,23,23,"Artifact (5)"]
["UPN_Te4_004",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",9708,1341,11076,0.121072589382449,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.3,31.45,4884,15,4917,0.00305064063453325,4824,1326,6159,0.215294690696542,2,23,23,"Artifact (5)"]
["UPN_Te4_005",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",13315,1661,15020,0.110585885486019,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.42,31.62,6824,19,6871,0.00276524523359045,6491,1642,8149,0.201497116210578,2,23,23,"Artifact (5)"]
["UPN_Te4_006",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",14436,1773,16256,0.109067421259843,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.34,31.67,7122,16,7165,0.00223307745987439,7314,1757,9091,0.193268067319327,2,23,23,"Artifact (5)"]
["UPN_Te4_007",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",17928,2057,20040,0.102644710578842,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.62,31.64,10590,34,10667,0.0031874003937377,7338,2023,9373,0.215832710978342,2,23,23,"Artifact (5)"]
["UPN_Te4_008",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",22190,2749,25014,0.109898456864156,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.48,31.63,12104,27,12164,0.00221966458401841,10086,2722,12850,0.211828793774319,2,23,23,"Artifact (5)"]
["UPN_Te4_009",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",6709,876,7605,0.115187376725838,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.54,31.66,3723,17,3754,0.00452850293020778,2986,859,3851,0.223058945728382,2,23,23,"Artifact (5)"]
["UPN_Te4_010",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",14924,1721,16690,0.103115638106651,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.64,31.68,8899,19,8945,0.00212409167132476,6025,1702,7745,0.219754680438993,2,23,23,"Artifact (5)"]
["UPN_Te4_011",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",23645,968,24724,0.0391522407377447,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.72,31.67,16175,38,16294,0.00233214680250399,7470,930,8430,0.110320284697509,2,23,23,"Artifact (6)"]
["UPN_Te4_012",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",9982,251,10241,0.024509325261205,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.9,31.43,6133,5,6143,0.000813934559661403,3849,246,4098,0.0600292825768668,2,23,23,"Artifact (6)"]
["UPN_Te4_013",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",5902,180,6110,0.0294599018003273,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.77,31.74,4077,9,4104,0.00219298245614035,1825,171,2006,0.0852442671984048,2,23,23,"Artifact (6)"]
["UPN_Te4_014",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",24239,777,25127,0.0309229116090261,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.72,31.72,17030,49,17173,0.00285331625225645,7209,728,7954,0.0915262760875031,2,23,23,"Artifact (6)"]
["UPN_Te4_015",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",17418,624,18104,0.0344675209898365,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.62,31.79,11831,32,11914,0.00268591572939399,5587,592,6190,0.0956381260096931,2,23,23,"Artifact (6)"]
["UPN_Te4_016",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",18329,603,19036,0.0316768228619458,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.66,31.45,12328,40,12465,0.00320898515844364,6001,563,6571,0.0856795008370111,2,23,23,"Artifact (6)"]
["UPN_Te4_017",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",9048,252,9321,0.0270357257804957,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.77,31.72,5188,10,5209,0.00191975427145325,3860,242,4112,0.058852140077821,2,23,23,"Artifact (6)"]
["UPN_Te4_018",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",22787,836,23736,0.0352207617121672,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.65,31.76,15445,56,15600,0.00358974358974359,7342,780,8136,0.0958702064896755,2,23,23,"Artifact (6)"]
["UPN_Te4_019",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",8775,108,8890,0.01214848143982,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.88,32.13,5268,10,5284,0.00189250567751703,3507,98,3606,0.0271769273433167,2,23,23,"Artifact (8)"]
["UPN_Te4_020",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",15575,432,16025,0.0269578783151326,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.85,31.7,9273,21,9305,0.00225685115529285,6302,411,6720,0.0611607142857143,2,23,23,"Artifact (6)"]
["UPN_Te4_021",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",19359,437,19830,0.0220373171961674,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.88,31.78,11476,29,11521,0.00251714260914851,7883,408,8309,0.0491033818750752,2,23,23,"Artifact (6)"]
["UPN_Te4_022",2,25469083,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys459Glu/c.1375A>G",13986,375,14379,0.026079699561861,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.273,"Tolerated",33.86,31.68,8269,27,8307,0.00325027085590466,5717,348,6072,0.0573122529644269,2,23,23,"Artifact (6)"]
["UPN_Te4_002",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",5315,56,5385,0.0103992571959146,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.39,"NA",5315,56,5385,0.0103992571959146,0,0,0,"NA",1,20,20,"Artifact (7)"]
["UPN_Te4_003",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",4157,50,4222,0.0118427285646613,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.48,"NA",4157,50,4222,0.0118427285646613,0,0,0,"NA",1,20,20,"Artifact (7)"]
["UPN_Te4_004",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",4485,66,4579,0.0144136274295698,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.43,"NA",4485,66,4579,0.0144136274295698,0,0,0,"NA",1,20,20,"Artifact (7)"]
["UPN_Te4_005",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggc/|p.Gly413fs/c.1238delG",6129,64,6212,0.0103026400515132,0,0,0,0,0,0,0,1,1,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.46,"NA",6129,64,6212,0.0103026400515132,0,0,0,"NA",1,20,20,"Artifact (8)"]
["UPN_Te4_006",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",6347,69,6432,0.0107276119402985,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.51,"NA",6347,69,6432,0.0107276119402985,0,0,0,"NA",1,20,20,"Artifact (7)"]
["UPN_Te4_007",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",6603,78,6691,0.0116574503063817,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.39,"NA",6603,78,6691,0.0116574503063817,0,0,0,"NA",1,20,20,"Artifact (7)"]
["UPN_Te4_008",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",9175,121,9331,0.0129675275961848,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.44,"NA",9152,120,9307,0.0128935210056946,23,1,24,0.0416666666666667,0.270091115298695,20,20,"Artifact (8)"]
["UPN_Te4_009",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",2735,37,2780,0.0133093525179856,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.36,"NA",2735,37,2780,0.0133093525179856,0,0,0,"NA",1,20,20,"Artifact (7)"]
["UPN_Te4_011",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",7786,94,7911,0.0118821893565921,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.13,"NA",7786,94,7911,0.0118821893565921,0,0,0,"NA",1,20,20,"Artifact (7)"]
["UPN_Te4_012",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",3494,50,3557,0.0140567894292943,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.38,"NA",3494,50,3557,0.0140567894292943,0,0,0,"NA",1,20,20,"Artifact (7)"]
["UPN_Te4_013",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",1928,26,1965,0.0132315521628499,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.18,"NA",1928,26,1965,0.0132315521628499,0,0,0,"NA",1,20,20,"Artifact (7)"]
["UPN_Te4_014",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",8699,123,8845,0.0139061616732617,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.11,"NA",8695,123,8841,0.0139124533423821,4,0,4,0,1,20,20,"Artifact (7)"]
["UPN_Te4_015",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",6084,70,6182,0.0113231963765772,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.13,"NA",6084,70,6182,0.0113231963765772,0,0,0,"NA",1,20,20,"Artifact (7)"]
["UPN_Te4_016",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",5979,67,6076,0.011026991441738,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.12,"NA",5979,67,6076,0.011026991441738,0,0,0,"NA",1,20,20,"Artifact (7)"]
["UPN_Te4_017",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",3830,43,3883,0.0110739119237703,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.4,"NA",3830,43,3883,0.0110739119237703,0,0,0,"NA",1,20,20,"Artifact (7)"]
["UPN_Te4_018",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",7494,103,7624,0.0135099685204617,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.1,"NA",7494,103,7624,0.0135099685204617,0,0,0,"NA",1,20,20,"Artifact (7)"]
["UPN_Te4_019",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",3520,41,3571,0.0114813777653318,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.38,"NA",3520,41,3571,0.0114813777653318,0,0,0,"NA",1,20,20,"Artifact (7)"]
["UPN_Te4_020",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",5698,66,5772,0.0114345114345114,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.32,"NA",5698,66,5772,0.0114345114345114,0,0,0,"NA",1,20,20,"Artifact (7)"]
["UPN_Te4_021",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",6715,77,6801,0.0113218644317012,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.35,"NA",6715,77,6801,0.0113218644317012,0,0,0,"NA",1,20,20,"Artifact (7)"]
["UPN_Te4_022",2,25469529,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ctg/|p.Gly413fs/c.1233delG",5628,62,5706,0.0108657553452506,0,0,0,0,1,0,0,1,2,0.1457,"NO","NO","NA","NA","NO","NO","NO",4.119E-005,"NO","NO","NA","NA",35.35,"NA",5622,62,5700,0.0108771929824561,6,0,6,0,1,20,20,"Artifact (7)"]
["UPN_Te4_001",2,25469566,"A","C","DNMT3A","ENST00000264709","missense_variant","gTg/gGg|p.Val401Gly/c.1202T>G",7530,98,7687,0.0127487966697021,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.034,"Tolerated",21,15.23,7530,98,7687,0.0127487966697021,0,0,0,"NA",1,3,3,"Artifact (5)"]
["UPN_Te4_013",2,25469566,"A","C","DNMT3A","ENST00000264709","missense_variant","gTg/gGg|p.Val401Gly/c.1202T>G",1918,20,1957,0.0102197240674502,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.034,"Tolerated",21.1,17.85,1918,20,1957,0.0102197240674502,0,0,0,"NA",1,3,3,"Artifact (5)"]
["UPN_Te4_016",2,25469566,"A","C","DNMT3A","ENST00000264709","missense_variant","gTg/gGg|p.Val401Gly/c.1202T>G",5903,65,6023,0.010791964137473,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.034,"Tolerated",21.05,15.78,5903,65,6023,0.010791964137473,0,0,0,"NA",1,3,3,"Artifact (5)"]
["UPN_Te4_009",2,25469982,"A","C","DNMT3A","ENST00000264709","missense_variant","Ttc/Gtc|p.Phe354Val/c.1060T>G",2472,26,2519,0.0103215561730846,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.639,"Deleterious",17.73,28.38,2472,26,2519,0.0103215561730846,0,0,0,"NA",1,1,2,"Artifact (3)"]
["UPN_Te4_013",2,25469982,"A","G","DNMT3A","ENST00000264709","missense_variant","Ttc/Ctc|p.Phe354Leu/c.1060T>C",2201,26,2248,0.0115658362989324,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.876,"Deleterious",17.25,29.77,2201,26,2248,0.0115658362989324,0,0,0,"NA",1,1,2,"Artifact (2)"]
["UPN_Te4_019",2,25469993,"A","C","DNMT3A","ENST00000264709","missense_variant","tTt/tGt|p.Phe350Cys/c.1049T>G",3319,35,3370,0.0103857566765579,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.196,"Deleterious",20.95,15.23,3319,35,3370,0.0103857566765579,0,0,0,"NA",1,1,1,"Artifact (3)"]
["UPN_Te4_019",2,25469994,"A","C","DNMT3A","ENST00000264709","missense_variant","Ttt/Gtt|p.Phe350Val/c.1048T>G",3322,34,3370,0.0100890207715134,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.317,"Deleterious",19.22,15.94,3322,34,3370,0.0100890207715134,0,0,0,"NA",1,1,1,"Artifact (3)"]
["UPN_Te4_001",2,25470020,"A","C","DNMT3A","ENST00000264709","missense_variant","gTt/gGt|p.Val341Gly/c.1022T>G",15921,199,16330,0.0121861604409063,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.524,"Tolerated",21.97,15.11,8004,130,8228,0.0157997083130773,7917,69,8102,0.0085164156998272,2.32119349064944E-005,1,1,"Artifact (4)"]
["UPN_Te4_003",2,25470026,"A","C","DNMT3A","ENST00000264709","missense_variant","gTg/gGg|p.Val339Gly/c.1016T>G",7730,116,7907,0.0146705450866321,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.3,"Deleterious",23.67,17.86,3881,70,3975,0.0176100628930818,3849,46,3932,0.0116988809766022,0.0315105348809423,1,1,"Artifact (3)"]
["UPN_Te4_010",2,25470467,"A","T","DNMT3A","ENST00000264709","missense_variant","tTc/tAc|p.Phe336Tyr/c.1007T>A",5830,65,5916,0.0109871534820825,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.135,"Tolerated",34.82,35.48,5820,65,5906,0.0110057568574331,10,0,10,0,1,1,1,"Artifact (2)"]
["UPN_Te4_007",2,25470472,"GCCGTCTCCGAACCACATGACCCAGCGGGTGCCTTCAGCTGCTCGGCTCCGGC","G","DNMT3A","ENST00000264709","frameshift_variant","ggccggagccgagcagctgaaggcacccgctgggtcatgtggttcggagacggc/|p.Gly317fs/c.950_1001delGCCGGAGCCGAGCAGCTGAAGGCACCCGCTGGGTCATGTGGTTCGGAGACGG",4183,"NA",4194,"NA",0,0,0,0,0,0,0,1,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.08,"NA",4167,"NA",4178,"NA",16,"NA",16,"NA","NA",1,1,"Artifact (1)"]
["UPN_Te4_007",2,25470556,"C","T","DNMT3A","ENST00000264709","stop_gained","tgG/tgA|p.Trp306*/c.918G>A",8105,83,8215,0.0101034692635423,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO","NA","NA",34.11,31.53,4073,41,4127,0.00993457717470317,4032,42,4088,0.0102739726027397,0.912420582549931,1,1,"Artifact (0)"]
["UPN_Te4_005",2,25497817,"T","C","DNMT3A","ENST00000264709","missense_variant","aAa/aGa|p.Lys211Arg/c.632A>G",2419,26,2458,0.0105777054515867,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.458,"Tolerated",35.25,35.65,2419,26,2458,0.0105777054515867,0,0,0,"NA",1,1,1,"Artifact (2)"]
["UPN_Te4_010",2,25497823,"C","A","DNMT3A","ENST00000264709","missense_variant","cGc/cTc|p.Arg209Leu/c.626G>T",2902,36,2945,0.0122241086587436,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.669,"Tolerated",35.56,34.75,2902,36,2945,0.0122241086587436,0,0,0,"NA",1,1,1,"Artifact (2)"]
["UPN_Te4_010",2,25497847,"C","T","DNMT3A","ENST00000264709","missense_variant","cGc/cAc|p.Arg201His/c.602G>A",3004,32,3054,0.0104780615586117,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO",8.237E-006,"NO","NO",-0.7,"Tolerated",34.67,32.03,2898,30,2942,0.0101971447994562,106,2,112,0.0178571428571429,0.316068727089003,1,1,"Artifact (2)"]
["UPN_Te4_001",2,25497848,"G","A","DNMT3A","ENST00000264709","missense_variant","Cgc/Tgc|p.Arg201Cys/c.601C>T",6391,74,6474,0.0114303367315416,0,0,0,1,1,0,0,1,3,"NO","NO","COSM5480451","Something is odd...",0,"NO","NO","NO","NO","NO","NO",-1.129,"Tolerated",31.34,32.86,3197,38,3242,0.0117211597779149,3194,36,3232,0.0111386138613861,0.907029112481827,1,1,"Artifact (1)"]
["UPN_Te4_011",2,25497854,"T","C","DNMT3A","ENST00000264709","missense_variant","Agc/Ggc|p.Ser199Gly/c.595A>G",6769,76,6874,0.0110561536223451,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.426,"Tolerated",32.01,32.39,3362,38,3417,0.0111208662569505,3407,38,3457,0.0109921897599074,1,1,1,"Artifact (2)"]
["UPN_Te4_010",2,25497862,"T","A","DNMT3A","ENST00000264709","missense_variant","tAc/tTc|p.Tyr196Phe/c.587A>T",5796,85,5905,0.0143945808636749,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.737,"Tolerated",32.94,29.99,2886,46,2942,0.0156356220258328,2910,39,2963,0.0131623354708066,0.446102571306181,1,1,"Artifact (1)"]
["UPN_Te4_016",2,25497868,"TC","T","DNMT3A","ENST00000264709","frameshift_variant","gcg/|p.Asp194fs/c.576delG",6147,63,6220,0.0101286173633441,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.84,"NA",3051,32,3087,0.0103660511823777,3096,31,3133,0.00989466964570699,0.899596934277617,1,1,"Artifact (4)"]
["UPN_Te4_010",2,25497884,"T","A","DNMT3A","ENST00000264709","missense_variant","Acc/Tcc|p.Thr189Ser/c.565A>T",5768,98,5909,0.0165848705364698,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.015,"Tolerated",31.01,32.01,2871,54,2941,0.0183611016661,2897,44,2968,0.0148247978436658,0.30967296638912,1,1,"Artifact (1)"]
["UPN_Te4_005",2,25497892,"G","A","DNMT3A","ENST00000264709","missense_variant","cCg/cTg|p.Pro186Leu/c.557C>T",4873,62,4942,0.0125455281262647,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.57,"Deleterious",34.68,32.85,2418,29,2450,0.0118367346938776,2455,33,2492,0.0132423756019262,0.702355179902644,2,2,"Artifact (1)"]
["UPN_Te4_006",2,25497892,"G","A","DNMT3A","ENST00000264709","missense_variant","cCg/cTg|p.Pro186Leu/c.557C>T",4764,68,4840,0.0140495867768595,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.57,"Deleterious",34.72,31.01,2364,34,2404,0.0141430948419301,2400,34,2436,0.0139573070607553,1,2,2,"Artifact (1)"]
["UPN_Te4_014",2,25497901,"C","T","DNMT3A","ENST00000264709","missense_variant","cGg/cAg|p.Arg183Gln/c.548G>A",7889,80,7975,0.0100313479623824,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.866,"Tolerated",33.58,32.51,3906,40,3948,0.0101317122593718,3983,40,4027,0.00993295257015148,1,1,1,"Artifact (2)"]
["UPN_Te4_002",2,25497919,"T","C","DNMT3A","ENST00000264709","missense_variant","gAg/gGg|p.Glu177Gly/c.530A>G",4263,57,4328,0.0131700554528651,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.488,"Tolerated",34.09,33.86,2110,26,2143,0.0121325244983668,2153,31,2185,0.014187643020595,0.595505075539571,1,1,"Artifact (2)"]
["UPN_Te4_008",2,25497950,"G","A","DNMT3A","ENST00000264709","missense_variant","Cgg/Tgg|p.Arg167Trp/c.499C>T",3225,38,3267,0.0116314661769207,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.933,"Tolerated",33.22,33.97,0,0,0,"NA",3225,38,3267,0.0116314661769207,1,1,1,"Artifact (2)"]
["UPN_Te4_001",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",16554,314,16967,0.0185065126421878,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.19,"NA",0,0,0,"NA",16554,314,16967,0.0185065126421878,1,22,22,"Artifact (9)"]
["UPN_Te4_002",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",12332,156,12553,0.0124273082131761,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.85,"NA",0,0,0,"NA",12332,156,12553,0.0124273082131761,1,22,22,"Artifact (9)"]
["UPN_Te4_003",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",10140,137,10330,0.0132623426911907,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.83,"NA",16,0,16,0,10124,137,10314,0.0132829164242777,1,22,22,"Artifact (10)"]
["UPN_Te4_004",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",10133,132,10314,0.0127981384525887,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.83,"NA",0,0,0,"NA",10133,132,10314,0.0127981384525887,1,22,22,"Artifact (9)"]
["UPN_Te4_005",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",13732,159,13948,0.0113994837969601,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.74,"NA",0,0,0,"NA",13732,159,13948,0.0113994837969601,1,22,22,"Artifact (9)"]
["UPN_Te4_006",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",13410,177,13644,0.0129727352682498,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.86,"NA",25,0,25,0,13385,177,13619,0.0129965489389823,1,22,22,"Artifact (10)"]
["UPN_Te4_007",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",14620,163,14838,0.010985307992991,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.83,"NA",0,0,0,"NA",14620,163,14838,0.010985307992991,1,22,22,"Artifact (9)"]
["UPN_Te4_008",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",20221,239,20553,0.011628472729042,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.83,"NA",0,0,0,"NA",20221,239,20553,0.011628472729042,1,22,22,"Artifact (9)"]
["UPN_Te4_009",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",5875,65,5967,0.0108932461873638,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.84,"NA",0,0,0,"NA",5875,65,5967,0.0108932461873638,1,22,22,"Artifact (9)"]
["UPN_Te4_010",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",17770,265,18104,0.014637649138312,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.83,"NA",0,0,0,"NA",17770,265,18104,0.014637649138312,1,22,22,"Artifact (9)"]
["UPN_Te4_011",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",15983,215,16315,0.0131780570027582,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.17,"NA",0,0,0,"NA",15983,215,16315,0.0131780570027582,1,22,22,"Artifact (9)"]
["UPN_Te4_012",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.327delG",7816,110,7955,0.0138277812696417,0,0,1,0,1,0,0,1,3,"NO","NO","COSM266404","large_intestine",1,"NO","NO","NO","NO","NO","NO","NA","NA",34.78,"NA",0,0,0,"NA",7816,110,7955,0.0138277812696417,1,22,22,"Artifact (7)"]
["UPN_Te4_013",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",4252,57,4342,0.0131275909719024,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.19,"NA",0,0,0,"NA",4252,57,4342,0.0131275909719024,1,22,22,"Artifact (9)"]
["UPN_Te4_014",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",19733,295,20169,0.014626406862016,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.13,"NA",0,0,0,"NA",19733,295,20169,0.014626406862016,1,22,22,"Artifact (9)"]
["UPN_Te4_015",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",11895,160,12145,0.0131741457389872,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.23,"NA",0,0,0,"NA",11895,160,12145,0.0131741457389872,1,22,22,"Artifact (9)"]
["UPN_Te4_016",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",13473,192,13767,0.013946393549793,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.15,"NA",0,0,0,"NA",13473,192,13767,0.013946393549793,1,22,22,"Artifact (9)"]
["UPN_Te4_017",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",7000,73,7100,0.0102816901408451,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.62,"NA",0,0,0,"NA",7000,73,7100,0.0102816901408451,1,22,22,"Artifact (9)"]
["UPN_Te4_018",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",15522,234,15856,0.0147578203834511,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.16,"NA",0,0,0,"NA",15522,234,15856,0.0147578203834511,1,22,22,"Artifact (9)"]
["UPN_Te4_019",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",7171,87,7289,0.011935793661682,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.66,"NA",0,0,0,"NA",7171,87,7289,0.011935793661682,1,22,22,"Artifact (9)"]
["UPN_Te4_020",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",10614,119,10767,0.0110522894028049,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.69,"NA",0,0,0,"NA",10614,119,10767,0.0110522894028049,1,22,22,"Artifact (9)"]
["UPN_Te4_021",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",14186,179,14417,0.0124158978983145,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.6,"NA",0,0,0,"NA",14186,179,14417,0.0124158978983145,1,22,22,"Artifact (9)"]
["UPN_Te4_022",2,25505430,"GC","G","DNMT3A","ENST00000264709","frameshift_variant","ggg/|p.Gln110fs/c.322delG",10735,154,10942,0.0140742094681046,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.7,"NA",0,0,0,"NA",10735,154,10942,0.0140742094681046,1,22,22,"Artifact (9)"]
["UPN_Te4_003",2,25505498,"A","C","DNMT3A","ENST00000264709","missense_variant","cTa/cGa|p.Leu87Arg/c.260T>G",15262,168,15507,0.0108338169858773,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.695,"Tolerated",32.96,31.89,5194,1,5216,0.000191717791411043,10068,167,10291,0.0162277718394714,2,8,8,"Artifact (5)"]
["UPN_Te4_004",2,25505498,"A","C","DNMT3A","ENST00000264709","missense_variant","cTa/cGa|p.Leu87Arg/c.260T>G",15098,228,15397,0.0148080794960057,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.695,"Tolerated",32.95,31.62,5127,0,5134,0,9971,228,10263,0.0222157263957907,2,8,8,"Artifact (6)"]
["UPN_Te4_005",2,25505498,"A","C","DNMT3A","ENST00000264709","missense_variant","cTa/cGa|p.Leu87Arg/c.260T>G",19481,244,19829,0.0123052095415805,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.695,"Tolerated",32.84,31.32,5909,2,5930,0.000337268128161889,13572,242,13899,0.0174113245557234,2,8,8,"Artifact (5)"]
["UPN_Te4_006",2,25505498,"A","C","DNMT3A","ENST00000264709","missense_variant","cTa/cGa|p.Leu87Arg/c.260T>G",20889,262,21244,0.0123328939935982,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.695,"Tolerated",33.07,31.63,7658,2,7678,0.00026048450117218,13231,260,13566,0.0191655609612266,2,8,8,"Artifact (5)"]
["UPN_Te4_007",2,25505498,"A","C","DNMT3A","ENST00000264709","missense_variant","cTa/cGa|p.Leu87Arg/c.260T>G",21632,361,22088,0.0163437160449113,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.695,"Tolerated",32.93,31.48,7307,0,7328,0,14325,361,14760,0.0244579945799458,2,8,8,"Artifact (6)"]
["UPN_Te4_008",2,25505498,"A","C","DNMT3A","ENST00000264709","missense_variant","cTa/cGa|p.Leu87Arg/c.260T>G",31166,436,31747,0.0137335811257757,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.695,"Tolerated",33.04,31.45,11254,1,11296,8.85269121813031E-005,19912,435,20451,0.0212703535279448,2,8,8,"Artifact (6)"]
["UPN_Te4_009",2,25505498,"A","C","DNMT3A","ENST00000264709","missense_variant","cTa/cGa|p.Leu87Arg/c.260T>G",8923,125,9094,0.0137453265889598,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.695,"Tolerated",33,31.73,3153,0,3159,0,5770,125,5935,0.02106149957877,2,8,8,"Artifact (6)"]
["UPN_Te4_010",2,25505498,"A","C","DNMT3A","ENST00000264709","missense_variant","cTa/cGa|p.Leu87Arg/c.260T>G",25674,444,26230,0.016927182615326,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.695,"Tolerated",32.85,31.57,8164,1,8186,0.000122159784998778,17510,443,18044,0.0245510973176679,2,8,8,"Artifact (5)"]
["UPN_Te4_001",2,25523008,"C","CG","DNMT3A","ENST00000264709","frameshift_variant","cac/caCc|p.Val60fs/c.170_171insC",3985,42,4020,0.0104477611940299,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO",4.118E-005,"NO","NO","NA","NA",34.81,"NA",3971,42,4006,0.0104842735896156,14,0,14,0,1,1,8,"Artifact (5)"]
["UPN_Te4_001",2,25523008,"CG","C","DNMT3A","ENST00000264709","frameshift_variant","cac/|p.Pro59fs/c.171delC",3919,69,4020,0.0171641791044776,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.92,"NA",3905,69,4006,0.0172241637543684,14,0,14,0,1,7,8,"Artifact (8)"]
["UPN_Te4_007",2,25523008,"CG","C","DNMT3A","ENST00000264709","frameshift_variant","cac/|p.Pro59fs/c.171delC",5323,67,5402,0.0124028137726768,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.03,"NA",5196,56,5264,0.0106382978723404,127,11,138,0.0797101449275362,7.8462519646867E-007,7,8,"Artifact (8)"]
["UPN_Te4_011",2,25523008,"CG","C","DNMT3A","ENST00000264709","frameshift_variant","cac/|p.Pro59fs/c.171delC",5316,61,5395,0.011306765523633,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.76,"NA",5289,61,5368,0.0113636363636364,27,0,27,0,1,7,8,"Artifact (9)"]
["UPN_Te4_015",2,25523008,"CG","C","DNMT3A","ENST00000264709","frameshift_variant","cac/|p.Pro59fs/c.171delC",3557,64,3637,0.0175969205389057,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.93,"NA",3552,64,3632,0.0176211453744493,5,0,5,0,1,7,8,"Artifact (8)"]
["UPN_Te4_018",2,25523008,"CG","C","DNMT3A","ENST00000264709","frameshift_variant","cac/|p.Pro59fs/c.171delC",5734,70,5837,0.0119924618811033,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.79,"NA",5716,70,5819,0.012029558343358,18,0,18,0,1,7,8,"Artifact (9)"]
["UPN_Te4_021",2,25523008,"CG","C","DNMT3A","ENST00000264709","frameshift_variant","cac/|p.Pro59fs/c.171delC",5155,54,5225,0.0103349282296651,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.17,"NA",5128,54,5198,0.0103886110042324,27,0,27,0,1,7,8,"Artifact (9)"]
["UPN_Te4_022",2,25523008,"CG","C","DNMT3A","ENST00000264709","frameshift_variant","cac/|p.Pro59fs/c.171delC",2467,32,2508,0.0127591706539075,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.21,"NA",2453,32,2494,0.0128307939053729,14,0,14,0,1,7,8,"Artifact (8)"]
["UPN_Te4_003",2,25523082,"T","C","DNMT3A","ENST00000264709","missense_variant","Aag/Gag|p.Lys35Glu/c.103A>G",3366,37,3418,0.010825043885313,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.085,"Tolerated",33.91,32.86,3360,26,3401,0.00764481034989709,6,11,17,0.647058823529412,5.80576181586206E-019,1,1,"Artifact (4)"]
["UPN_Te4_010",2,25523105,"T","C","DNMT3A","ENST00000264709","missense_variant","gAg/gGg|p.Glu27Gly/c.80A>G",8102,86,8209,0.0104763064928737,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.32,"Tolerated",32.8,31.3,4080,42,4135,0.0101571946795647,4022,44,4074,0.0108001963672067,0.828671740356787,1,1,"Artifact (2)"]
["UPN_Te4_001",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",7121,94,7260,0.0129476584022039,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.13,"NA",7121,94,7260,0.0129476584022039,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_002",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",4115,56,4200,0.0133333333333333,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.1,"NA",4115,56,4200,0.0133333333333333,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_003",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",3881,50,3950,0.0126582278481013,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.11,"NA",3881,50,3950,0.0126582278481013,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_004",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",4625,63,4729,0.0133220554028336,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.99,"NA",4625,63,4729,0.0133220554028336,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_005",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",5359,86,5472,0.0157163742690058,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.07,"NA",5358,86,5471,0.0157192469384025,1,0,1,0,1,20,20,"Artifact (9)"]
["UPN_Te4_006",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",4309,48,4376,0.0109689213893967,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.1,"NA",4309,48,4376,0.0109689213893967,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_007",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",6195,67,6302,0.0106315455410981,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.14,"NA",6195,67,6302,0.0106315455410981,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_008",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",1785,28,1826,0.0153340635268346,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.17,"NA",1785,28,1826,0.0153340635268346,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_009",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",1886,21,1918,0.0109489051094891,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.97,"NA",1886,21,1918,0.0109489051094891,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_010",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",6608,79,6725,0.0117472118959108,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.22,"NA",6608,79,6725,0.0117472118959108,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_011",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",7993,109,8152,0.0133709519136408,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.08,"NA",7993,109,8152,0.0133709519136408,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_012",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",3696,46,3752,0.0122601279317697,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.39,"NA",3696,46,3752,0.0122601279317697,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_013",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",5156,86,5275,0.016303317535545,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.11,"NA",5156,86,5275,0.016303317535545,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_014",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",7659,104,7816,0.0133060388945752,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.16,"NA",7659,104,7816,0.0133060388945752,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_015",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",3450,51,3523,0.0144762986091399,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.11,"NA",3450,51,3523,0.0144762986091399,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_017",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",4274,49,4333,0.0113085621970921,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.47,"NA",4274,49,4333,0.0113085621970921,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_018",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",7068,77,7184,0.0107182628062361,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.09,"NA",7068,77,7184,0.0107182628062361,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_019",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",1843,24,1879,0.0127727514635444,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.52,"NA",1843,24,1879,0.0127727514635444,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_020",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",2515,36,2566,0.0140296180826189,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.38,"NA",2515,36,2566,0.0140296180826189,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_022",2,198266476,"AT","A","SF3B1","ENST00000335508","frameshift_variant","aaa/|p.Ile787fs/c.2353delA",5653,72,5749,0.0125239172029918,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.38,"NA",5653,72,5749,0.0125239172029918,0,0,0,"NA",1,20,20,"Artifact (9)"]
["UPN_Te4_010",2,198267285,"T","C","SF3B1","ENST00000335508","missense_variant","gAa/gGa|p.Glu691Gly/c.2072A>G",4760,71,4921,0.0144279617963828,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.756,"Deleterious",28.35,31.06,2019,28,2134,0.0131208997188379,2741,43,2787,0.0154287764621457,0.631057305998672,1,1,"Artifact (2)"]
["UPN_Te4_011",2,198267294,"T","A","SF3B1","ENST00000335508","missense_variant","gAa/gTa|p.Glu688Val/c.2063A>T",7838,96,7971,0.0120436582611968,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.666,"Deleterious",28.93,22.39,3389,75,3476,0.0215765247410817,4449,21,4495,0.00467185761957731,5.39218703347169E-012,1,1,"Artifact (3)"]
["UPN_Te4_015",2,198267318,"A","G","SF3B1","ENST00000335508","missense_variant","tTg/tCg|p.Leu680Ser/c.2039T>C",2081,27,2116,0.0127599243856333,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.729,"Deleterious",34.12,35.67,0,0,0,"NA",2081,27,2116,0.0127599243856333,1,1,1,"Artifact (0)"]
["UPN_Te4_004",2,198267325,"C","A","SF3B1","ENST00000335508","missense_variant","Gcc/Tcc|p.Ala678Ser/c.2032G>T",1827,20,1854,0.0107874865156419,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.665,"Deleterious",35.18,34.85,0,0,0,"NA",1827,20,1854,0.0107874865156419,1,1,1,"Artifact (1)"]
["UPN_Te4_001",2,198267330,"C","G","SF3B1","ENST00000335508","missense_variant","gGc/gCc|p.Gly676Ala/c.2027G>C",18753,361,19176,0.018825615352524,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.729,"Deleterious",32.2,30.78,14977,358,15372,0.0232890970595889,3776,3,3804,0.000788643533123028,3.22540995426362E-030,16,16,"Artifact (8)"]
["UPN_Te4_002",2,198267330,"C","G","SF3B1","ENST00000335508","missense_variant","gGc/gCc|p.Gly676Ala/c.2027G>C",13302,1028,14385,0.0714633298574904,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.729,"Deleterious",32.28,31.43,11148,1026,12220,0.0839607201309329,2154,2,2165,0.00092378752886836,4.52533508279555E-072,16,16,"Artifact (6)"]
["UPN_Te4_003",2,198267330,"C","G","SF3B1","ENST00000335508","missense_variant","gGc/gCc|p.Gly676Ala/c.2027G>C",11741,854,12627,0.0676328502415459,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.729,"Deleterious",32.33,31.4,9696,852,10574,0.0805749952714205,2045,2,2053,0.000974184120798831,1.10647652918683E-064,16,16,"Artifact (6)"]
["UPN_Te4_004",2,198267330,"C","G","SF3B1","ENST00000335508","missense_variant","gGc/gCc|p.Gly676Ala/c.2027G>C",12753,1053,13858,0.075984990619137,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.729,"Deleterious",32.25,31.49,10903,1053,12003,0.0877280679830043,1850,0,1855,0,3.22923778824722E-069,16,16,"Artifact (7)"]
["UPN_Te4_005",2,198267330,"C","G","SF3B1","ENST00000335508","missense_variant","gGc/gCc|p.Gly676Ala/c.2027G>C",15718,1232,16985,0.0725345893435384,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.729,"Deleterious",32.33,31.43,12755,1231,14014,0.0878407306978736,2963,1,2971,0.000336587007741501,2.90165072381756E-105,16,16,"Artifact (7)"]
["UPN_Te4_006",2,198267330,"C","G","SF3B1","ENST00000335508","missense_variant","gGc/gCc|p.Gly676Ala/c.2027G>C",14751,956,15748,0.0607061214122428,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.729,"Deleterious",32.36,31.48,11953,954,12937,0.073741980366391,2798,2,2811,0.000711490572749911,1.4763462388169E-080,16,16,"Artifact (7)"]
["UPN_Te4_007",2,198267330,"C","G","SF3B1","ENST00000335508","missense_variant","gGc/gCc|p.Gly676Ala/c.2027G>C",15459,1379,16869,0.081747584326279,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.729,"Deleterious",32.28,31.3,12821,1377,14223,0.096815017928707,2638,2,2646,0.000755857898715042,5.98697558280687E-103,16,16,"Artifact (7)"]
["UPN_Te4_008",2,198267330,"C","G","SF3B1","ENST00000335508","missense_variant","gGc/gCc|p.Gly676Ala/c.2027G>C",4364,233,4617,0.0504656703487113,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.729,"Deleterious",33.38,31.28,2162,231,2401,0.0962099125364431,2202,2,2216,0.000902527075812274,8.54086595570762E-065,16,16,"Artifact (7)"]
["UPN_Te4_009",2,198267330,"C","G","SF3B1","ENST00000335508","missense_variant","gGc/gCc|p.Gly676Ala/c.2027G>C",4690,427,5137,0.0831224450068133,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.729,"Deleterious",32.44,31.26,3635,427,4080,0.104656862745098,1055,0,1057,0,1.43056415235545E-045,16,16,"Artifact (7)"]
["UPN_Te4_010",2,198267330,"C","G","SF3B1","ENST00000335508","missense_variant","gGc/gCc|p.Gly676Ala/c.2027G>C",17396,1703,19175,0.0888135593220339,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.729,"Deleterious",32.26,31.41,14618,1701,16384,0.10382080078125,2778,2,2791,0.000716589036187746,3.44198109903526E-118,16,16,"Artifact (7)"]
["UPN_Te4_011",2,198267330,"C","G","SF3B1","ENST00000335508","missense_variant","gGc/gCc|p.Gly676Ala/c.2027G>C",20596,768,21435,0.0358292512246326,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.729,"Deleterious",32.18,31.32,16129,767,16936,0.0452881435994332,4467,1,4499,0.000222271615914648,4.26883691258447E-078,16,16,"Artifact (6)"]
["UPN_Te4_013",2,198267330,"C","G","SF3B1","ENST00000335508","missense_variant","gGc/gCc|p.Gly676Ala/c.2027G>C",9466,285,9788,0.0291172864732325,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.729,"Deleterious",32.19,31.29,7770,285,8077,0.035285378234493,1696,0,1711,0,1.42338326515074E-024,16,16,"Artifact (7)"]
["UPN_Te4_014",2,198267330,"C","G","SF3B1","ENST00000335508","missense_variant","gGc/gCc|p.Gly676Ala/c.2027G>C",20977,597,21659,0.0275635994274897,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.729,"Deleterious",32.15,31.22,16918,595,17560,0.0338838268792711,4059,2,4099,0.000487923883874116,2.03337832915154E-051,16,16,"Artifact (7)"]
["UPN_Te4_015",2,198267330,"C","G","SF3B1","ENST00000335508","missense_variant","gGc/gCc|p.Gly676Ala/c.2027G>C",7893,206,8130,0.0253382533825338,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.729,"Deleterious",32.28,31.63,5793,206,6013,0.0342591052719109,2100,0,2117,0,7.15494036084633E-028,16,16,"Artifact (7)"]
["UPN_Te4_016",2,198267330,"C","G","SF3B1","ENST00000335508","missense_variant","gGc/gCc|p.Gly676Ala/c.2027G>C",13641,356,14066,0.0253092563628608,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.729,"Deleterious",32.16,31.17,10871,355,11274,0.0314883803441547,2770,1,2792,0.000358166189111748,4.67128031749546E-033,16,16,"Artifact (7)"]
["UPN_Te4_018",2,198267330,"C","G","SF3B1","ENST00000335508","missense_variant","gGc/gCc|p.Gly676Ala/c.2027G>C",18618,540,19232,0.0280782029950083,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.729,"Deleterious",32.17,31.06,15167,535,15757,0.0339531636732881,3451,5,3475,0.00143884892086331,2.09661219760932E-039,16,16,"Artifact (7)"]
["UPN_Te4_008",2,198267439,"C","A","SF3B1","ENST00000335508","missense_variant","Ggc/Tgc|p.Gly640Cys/c.1918G>T",5003,68,5088,0.0133647798742138,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-8.526,"Deleterious",31.74,28.13,2497,38,2539,0.0149665222528555,2506,30,2549,0.0117693213024716,0.332238531952168,1,1,"Artifact (0)"]
["UPN_Te4_001",2,209113295,"A","G","IDH1","ENST00000345146","missense_variant","gTc/gCc|p.Val71Ala/c.212T>C",5475,76,5561,0.0136666067254091,0,0,0,0,1,1,0,1,3,"NO","NO","COSM1404906","Something is odd...",0,"NO","NO","NO","NO","NO","NO",-3.731,"Deleterious",30.69,32.53,5475,29,5514,0.00525933986216902,0,47,47,1,2.68071307737896E-096,1,1,"Artifact (1)"]
["UPN_Te4_015",2,209113313,"T","C","IDH1","ENST00000345146","missense_variant","aAg/aGg|p.Lys65Arg/c.194A>G",4320,44,4392,0.0100182149362477,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.372,"Tolerated",34.4,34.48,4320,44,4392,0.0100182149362477,0,0,0,"NA",1,1,1,"Artifact (4)"]
["UPN_Te4_010",2,209113317,"T","A","IDH1","ENST00000345146","missense_variant","Ata/Tta|p.Ile64Leu/c.190A>T",4437,53,4500,0.0117777777777778,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.384,"Tolerated",34.89,30.57,4437,53,4500,0.0117777777777778,0,0,0,"NA",1,1,1,"Artifact (2)"]
["UPN_Te4_001",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",19341,312,19820,0.0157416750756811,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",33.58,31.9,3647,267,3922,0.0680775114737379,15694,45,15898,0.00283054472260662,1.94652175478302E-140,33,33,"Artifact (7)"]
["UPN_Te4_002",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",17752,691,18558,0.0372346157991163,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",34.04,31.4,2791,649,3450,0.188115942028986,14961,42,15108,0.00277998411437649,0,33,33,"Artifact (5)"]
["UPN_Te4_003",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",13397,479,13967,0.034295124221379,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",33.9,31.49,2141,459,2605,0.176199616122841,11256,20,11362,0.00176025347650062,"2.22389683239629e-316",33,33,"Artifact (5)"]
["UPN_Te4_004",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",14588,511,15182,0.0336582795415624,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",34.02,31.48,2090,484,2581,0.18752421542038,12498,27,12601,0.00214268708832632,0,33,33,"Artifact (5)"]
["UPN_Te4_005",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",18617,714,19462,0.0366868769910595,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",33.96,31.43,2884,673,3566,0.188726864834549,15733,41,15896,0.00257926522395571,0,33,33,"Artifact (5)"]
["UPN_Te4_006",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",19499,891,20502,0.043459174714662,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",33.76,31.54,3861,855,4724,0.180990685859441,15638,36,15778,0.00228165800481683,0,33,33,"Artifact (5)"]
["UPN_Te4_007",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",21125,761,22001,0.0345893368483251,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",33.99,31.4,2915,733,3654,0.200602079912425,18210,28,18347,0.00152613506295307,0,33,33,"Artifact (5)"]
["UPN_Te4_008",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",24862,1226,26229,0.0467421556292653,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",33.8,31.51,5085,1177,6273,0.187629523354057,19777,49,19956,0.00245540188414512,0,33,33,"Artifact (5)"]
["UPN_Te4_009",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",7783,312,8146,0.0383010066290204,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",33.86,31.19,1320,300,1627,0.184388444990781,6463,12,6519,0.00184077312471238,1.50177463353611E-200,33,33,"Artifact (5)"]
["UPN_Te4_010",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",17683,756,18545,0.0407657050417902,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",33.87,31.43,2741,726,3472,0.209101382488479,14942,30,15073,0.00199031380614344,0,33,33,"Artifact (5)"]
["UPN_Te4_011",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",19573,492,20224,0.0243275316455696,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",33.42,31.52,3879,427,4321,0.0988197176579495,15694,65,15903,0.00408727912972395,1.07527955880563E-217,33,33,"Artifact (5)"]
["UPN_Te4_012",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",8900,106,9027,0.0117425501273956,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",34.34,31.3,1333,96,1429,0.0671798460461861,7567,10,7598,0.00131613582521716,7.20800014843411E-066,33,33,"Artifact (7)"]
["UPN_Te4_013",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",5435,87,5576,0.0156025824964132,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",33.62,31.85,890,71,966,0.0734989648033126,4545,16,4610,0.003470715835141,9.58336117744704E-040,33,33,"Artifact (4)"]
["UPN_Te4_014",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",22119,421,22694,0.0185511588966247,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",33.64,31.53,3785,359,4152,0.0864643545279383,18334,62,18542,0.00334376011217776,2.36985228369213E-200,33,33,"Artifact (7)"]
["UPN_Te4_015",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",13782,267,14158,0.018858595846871,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",33.62,31.25,2553,245,2806,0.0873129009265859,11229,22,11352,0.00193798449612403,2.8363867074446E-146,33,33,"Artifact (7)"]
["UPN_Te4_016",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",14363,221,14686,0.0150483453629307,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",33.59,31.88,2480,186,2672,0.0696107784431138,11883,35,12014,0.00291326785417013,2.07785332227605E-102,33,33,"Artifact (4)"]
["UPN_Te4_017",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",9641,137,9793,0.0139895843970183,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",34.21,31.82,1855,118,1977,0.0596863935255438,7786,19,7816,0.00243091095189355,8.56188212482906E-063,33,33,"Artifact (7)"]
["UPN_Te4_018",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",18895,418,19450,0.0214910025706941,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",33.5,31.91,3755,372,4142,0.0898116851762434,15140,46,15308,0.00300496472432715,1.15383868270792E-198,33,33,"Artifact (5)"]
["UPN_Te4_020",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",13688,242,13956,0.0173402120951562,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",34.14,32.33,3006,210,3218,0.0652579241765072,10682,32,10738,0.00298007077668095,2.96692639312999E-100,33,33,"Artifact (7)"]
["UPN_Te4_021",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",14910,160,15100,0.0105960264900662,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",34.25,32.12,2515,121,2639,0.0458507010231148,12395,39,12461,0.00312976486638312,5.47050107534287E-059,33,33,"Artifact (4)"]
["UPN_Te4_022",3,38182049,"A","G","MYD88","ENST00000417037","missense_variant","Atc/Gtc|p.Ile225Val/c.673A>G",13260,160,13451,0.0118950263920898,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.615,"Tolerated",34.27,31.84,2054,127,2186,0.0580969807868253,11206,33,11265,0.00292942743009321,1.93911262821064E-070,33,33,"Artifact (4)"]
["UPN_Te4_001",3,38182056,"A","G","MYD88","ENST00000417037","missense_variant","aAg/aGg|p.Lys227Arg/c.680A>G",19456,231,19825,0.0116519546027743,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.026,"Tolerated",33.65,35.06,3876,45,3929,0.0114532960040723,15580,186,15896,0.0117010568696527,2,14,14,"Artifact (5)"]
["UPN_Te4_011",3,38182056,"A","G","MYD88","ENST00000417037","missense_variant","aAg/aGg|p.Lys227Arg/c.680A>G",19857,212,20244,0.0104722386880063,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.026,"Tolerated",33.6,34,4287,41,4341,0.00944482838055748,15570,171,15903,0.010752688172043,2,14,14,"Artifact (5)"]
["UPN_Te4_013",3,38182056,"A","G","MYD88","ENST00000417037","missense_variant","aAg/aGg|p.Lys227Arg/c.680A>G",5447,73,5576,0.0130918220946915,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.026,"Tolerated",33.5,34.68,954,10,967,0.0103412616339193,4493,63,4609,0.0136689086569755,2,14,14,"Artifact (5)"]
["UPN_Te4_014",3,38182056,"A","G","MYD88","ENST00000417037","missense_variant","aAg/aGg|p.Lys227Arg/c.680A>G",22237,265,22722,0.0116627057477335,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.026,"Tolerated",33.63,34.88,4132,40,4178,0.00957395883197702,18105,225,18544,0.0121333045729077,2,14,14,"Artifact (5)"]
["UPN_Te4_015",3,38182056,"A","G","MYD88","ENST00000417037","missense_variant","aAg/aGg|p.Lys227Arg/c.680A>G",13893,163,14171,0.0115023639827817,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.026,"Tolerated",33.7,35.4,2780,35,2821,0.0124069478908189,11113,128,11350,0.0112775330396476,2,14,14,"Artifact (5)"]
["UPN_Te4_016",3,38182056,"A","G","MYD88","ENST00000417037","missense_variant","aAg/aGg|p.Lys227Arg/c.680A>G",14396,177,14700,0.0120408163265306,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.026,"Tolerated",33.62,33.95,2646,29,2684,0.0108047690014903,11750,148,12016,0.0123169107856192,2,14,14,"Artifact (5)"]
["UPN_Te4_018",3,38182056,"A","G","MYD88","ENST00000417037","missense_variant","aAg/aGg|p.Lys227Arg/c.680A>G",19100,203,19472,0.0104252259654889,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.026,"Tolerated",33.59,35.07,4108,50,4165,0.0120048019207683,14992,153,15307,0.00999542692885608,2,14,14,"Artifact (5)"]
["UPN_Te4_010",3,105452880,"C","T","CBLB","ENST00000264122","missense_variant","atG/atA|p.Met392Ile/c.1176G>A",3880,51,3938,0.0129507364144236,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-1.811,"Tolerated",35.54,35.53,3880,51,3938,0.0129507364144236,0,0,0,"NA",1,1,1,"Artifact (0)"]
["UPN_Te4_008",3,105452935,"T","C","CBLB","ENST00000264122","missense_variant","aAg/aGg|p.Lys374Arg/c.1121A>G",1690,21,1720,0.0122093023255814,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.691,"Deleterious",34.61,32.48,1690,21,1720,0.0122093023255814,0,0,0,"NA",1,1,1,"Artifact (1)"]
["UPN_Te4_016",3,105452939,"A","G","CBLB","ENST00000264122","missense_variant","Tgt/Cgt|p.Cys373Arg/c.1117T>C",2671,28,2707,0.0103435537495382,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-10.766,"Deleterious",34.73,34.29,2671,28,2707,0.0103435537495382,0,0,0,"NA",1,1,1,"Artifact (0)"]
["UPN_Te4_007",3,128199866,"C","T","GATA2","ENST00000341105","missense_variant","gGc/gAc|p.Gly480Asp/c.1439G>A",3291,34,3333,0.0102010201020102,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.316,"Deleterious",35.5,36,3291,34,3333,0.0102010201020102,0,0,0,"NA",1,1,1,"Artifact (0)"]
["UPN_Te4_006",3,128199896,"G","A","GATA2","ENST00000341105","missense_variant","cCc/cTc|p.Pro470Leu/c.1409C>T",3619,39,3660,0.010655737704918,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.306,"Tolerated",35.22,35.51,3619,19,3640,0.00521978021978022,0,20,20,1,9.5987414069329E-043,1,1,"Artifact (3)"]
["UPN_Te4_004",3,128199968,"A","T","GATA2","ENST00000341105","missense_variant","tTc/tAc|p.Phe446Tyr/c.1337T>A",4369,47,4465,0.0105263157894737,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.176,"Tolerated",27.2,21.4,2207,14,2247,0.00623052959501558,2162,33,2218,0.01487826871055,0.00504865838408334,2,2,"Artifact (5)"]
["UPN_Te4_013",3,128199968,"A","T","GATA2","ENST00000341105","missense_variant","tTc/tAc|p.Phe446Tyr/c.1337T>A",2310,26,2370,0.0109704641350211,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.176,"Tolerated",26.89,22.85,1171,7,1197,0.00584795321637427,1139,19,1173,0.0161977834612106,0.0176451438771782,2,2,"Artifact (5)"]
["UPN_Te4_007",3,128199977,"A","G","GATA2","ENST00000341105","missense_variant","cTc/cCc|p.Leu443Pro/c.1328T>C",6493,67,6604,0.010145366444579,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.577,"Deleterious",31.97,31.01,3278,36,3322,0.0108368452739314,3215,31,3282,0.00944546008531383,0.624886369713028,1,1,"Artifact (4)"]
["UPN_Te4_001",3,128200109,"T","C","GATA2","ENST00000341105","missense_variant","aAg/aGg|p.Lys399Arg/c.1196A>G",4837,61,4965,0.0122860020140987,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.606,"Deleterious",33.97,31.59,4837,16,4920,0.0032520325203252,0,45,45,1,2.64294454109462E-096,3,3,"Artifact (0)"]
["UPN_Te4_006",3,128200109,"T","C","GATA2","ENST00000341105","missense_variant","aAg/aGg|p.Lys399Arg/c.1196A>G",3383,38,3449,0.01101768628588,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.606,"Deleterious",33.91,32.68,3383,12,3420,0.00350877192982456,0,26,29,0.896551724137931,1.55440822070737E-056,3,3,"Artifact (1)"]
["UPN_Te4_010",3,128200109,"T","C","GATA2","ENST00000341105","missense_variant","aAg/aGg|p.Lys399Arg/c.1196A>G",3254,42,3338,0.0125823846614739,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.606,"Deleterious",34.06,32,3254,11,3307,0.00332627759298458,0,31,31,1,3.55123474668273E-066,3,3,"Artifact (1)"]
["UPN_Te4_010",3,128200139,"T","A","GATA2","ENST00000341105","missense_variant","aAg/aTg|p.Lys389Met/c.1166A>T",3243,51,3307,0.0154218324765649,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.418,"Deleterious",33.18,27.59,3243,51,3307,0.0154218324765649,0,0,0,"NA",1,1,1,"Artifact (0)"]
["UPN_Te4_001",3,128200739,"T","C","GATA2","ENST00000341105","missense_variant","Acc/Gcc|p.Thr356Ala/c.1066A>G",2197,28,2283,0.0122645641699518,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.72,"Deleterious",26.12,23.96,1154,9,1170,0.00769230769230769,1043,19,1113,0.0170709793351303,0.036302662347796,3,3,"Artifact (3)"]
["UPN_Te4_006",3,128200739,"T","C","GATA2","ENST00000341105","missense_variant","Acc/Gcc|p.Thr356Ala/c.1066A>G",1827,26,1885,0.0137931034482759,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.72,"Deleterious",26.15,21.65,946,5,954,0.00524109014675052,881,21,931,0.0225563909774436,0.00113928419298911,3,3,"Artifact (3)"]
["UPN_Te4_015",3,128200739,"T","C","GATA2","ENST00000341105","missense_variant","Acc/Gcc|p.Thr356Ala/c.1066A>G",1743,24,1809,0.0132669983416252,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.72,"Deleterious",26.17,27.79,902,8,915,0.0087431693989071,841,16,894,0.0178970917225951,0.0985738255808746,3,3,"Artifact (2)"]
["UPN_Te4_001",3,128200744,"G","C","GATA2","ENST00000341105","missense_variant","aCg/aGg|p.Thr354Arg/c.1061C>G",2265,27,2294,0.0117698343504795,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.118,"Deleterious",32.7,27.07,1156,14,1170,0.011965811965812,1109,13,1124,0.0115658362989324,1,1,1,"Artifact (0)"]
["UPN_Te4_001",3,128200758,"A","T","GATA2","ENST00000341105","stop_gained","tgT/tgA|p.Cys349*/c.1047T>A",2231,36,2304,0.015625,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",24.68,17.69,1120,22,1165,0.0188841201716738,1111,14,1139,0.0122914837576822,0.239692310401117,2,2,"Artifact (4)"]
["UPN_Te4_018",3,128200758,"A","T","GATA2","ENST00000341105","stop_gained","tgT/tgA|p.Cys349*/c.1047T>A",2166,33,2222,0.0148514851485149,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",25.07,18.27,1091,16,1117,0.0143240823634736,1075,17,1105,0.0153846153846154,0.862324018465,2,2,"Artifact (4)"]
["UPN_Te4_006",3,128200761,"A","T","GATA2","ENST00000341105","stop_gained","tgT/tgA|p.Cys348*/c.1044T>A",1841,22,1888,0.0116525423728814,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",23.41,17.64,930,10,953,0.0104931794333683,911,12,935,0.0128342245989305,0.673304342126278,4,4,"Artifact (6)"]
["UPN_Te4_011",3,128200761,"A","T","GATA2","ENST00000341105","stop_gained","tgT/tgA|p.Cys348*/c.1044T>A",2309,68,2418,0.0281224152191894,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",22.41,19.35,1171,30,1220,0.0245901639344262,1138,38,1198,0.0317195325542571,0.3252401621491,4,4,"Artifact (4)"]
["UPN_Te4_014",3,128200761,"A","T","GATA2","ENST00000341105","stop_gained","tgT/tgA|p.Cys348*/c.1044T>A",3114,57,3221,0.0176963675877057,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",22.56,16.46,1588,18,1632,0.0110294117647059,1526,39,1589,0.0245437382001259,0.00460344651432129,4,4,"Artifact (6)"]
["UPN_Te4_018",3,128200761,"A","T","GATA2","ENST00000341105","stop_gained","tgT/tgA|p.Cys348*/c.1044T>A",2130,40,2222,0.018001800180018,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",22.75,17.92,1080,13,1117,0.0116383169203223,1050,27,1105,0.0244343891402715,0.02521751916054,4,4,"Artifact (6)"]
["UPN_Te4_001",3,128200766,"T","G","GATA2","ENST00000341105","missense_variant","Acc/Ccc|p.Thr347Pro/c.1039A>C",2179,89,2299,0.0387124836885602,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.249,"Deleterious",22.46,15.76,1080,71,1158,0.0613126079447323,1099,18,1141,0.0157756354075372,1.38696963005981E-008,3,3,"Artifact (1)"]
["UPN_Te4_004",3,128200766,"T","G","GATA2","ENST00000341105","missense_variant","Acc/Ccc|p.Thr347Pro/c.1039A>C",835,23,863,0.0266512166859791,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.249,"Deleterious",22.02,15.74,414,20,434,0.0460829493087558,421,3,429,0.00699300699300699,0.000421989872468914,3,3,"Artifact (2)"]
["UPN_Te4_007",3,128200766,"T","G","GATA2","ENST00000341105","missense_variant","Acc/Ccc|p.Thr347Pro/c.1039A>C",1992,54,2059,0.0262263234579893,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.249,"Deleterious",22.58,15.76,993,42,1038,0.0404624277456647,999,12,1021,0.0117531831537708,4.4377827087673E-005,3,3,"Artifact (1)"]
["UPN_Te4_001",3,128204622,"TC","T","GATA2","ENST00000341105","frameshift_variant","ctg/|p.Gly273fs/c.813delG",7922,91,8029,0.011333914559721,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.42,"NA",7922,91,8029,0.011333914559721,0,0,0,"NA",1,6,6,"Artifact (6)"]
["UPN_Te4_011",3,128204622,"TC","T","GATA2","ENST00000341105","frameshift_variant","ctg/|p.Gly273fs/c.813delG",9747,103,9866,0.0104398945874721,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.41,"NA",9747,103,9866,0.0104398945874721,0,0,0,"NA",1,6,6,"Artifact (6)"]
["UPN_Te4_013",3,128204622,"TC","T","GATA2","ENST00000341105","frameshift_variant","ctg/|p.Gly273fs/c.813delG",2071,32,2107,0.015187470336972,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.19,"NA",2071,32,2107,0.015187470336972,0,0,0,"NA",1,6,6,"Artifact (6)"]
["UPN_Te4_014",3,128204622,"TC","T","GATA2","ENST00000341105","frameshift_variant","ctg/|p.Gly273fs/c.813delG",10641,112,10770,0.0103992571959146,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.34,"NA",10641,112,10770,0.0103992571959146,0,0,0,"NA",1,6,6,"Artifact (6)"]
["UPN_Te4_015",3,128204622,"TC","T","GATA2","ENST00000341105","frameshift_variant","ctg/|p.Gly273fs/c.813delG",6466,67,6548,0.0102321319486866,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.25,"NA",6466,67,6548,0.0102321319486866,0,0,0,"NA",1,6,6,"Artifact (6)"]
["UPN_Te4_016",3,128204622,"TC","T","GATA2","ENST00000341105","frameshift_variant","gga/|p.Gly273fs/c.818delG",6929,72,7013,0.0102666476543562,0,0,0,0,0,0,0,1,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.3,"NA",6929,72,7013,0.0102666476543562,0,0,0,"NA",1,6,6,"Artifact (7)"]
["UPN_Te4_004",3,128204635,"C","T","GATA2","ENST00000341105","missense_variant","gGc/gAc|p.Gly269Asp/c.806G>A",5860,63,5925,0.0106329113924051,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO",8.238E-006,"NO","NO",-0.78,"Tolerated",35.46,33.78,5860,63,5925,0.0106329113924051,0,0,0,"NA",1,1,1,"Artifact (1)"]
["UPN_Te4_011",3,128204690,"A","C","GATA2","ENST00000341105","missense_variant","Tcc/Gcc|p.Ser251Ala/c.751T>G",17639,246,19258,0.0127739121404092,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.805,"Tolerated",21.1,15.43,8758,74,9714,0.00761787111385629,8881,172,9544,0.01802179379715,7.01454565785062E-010,1,22,"Artifact (5)"]
["UPN_Te4_001",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",14432,216,15638,0.0138125079933495,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",20.8,19.22,7141,182,7870,0.0231257941550191,7291,34,7768,0.00437693099897013,3.26341878547491E-026,21,22,"Artifact (10)"]
["UPN_Te4_002",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",11164,320,12250,0.0261224489795918,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",20.37,16.17,5429,298,6166,0.0483295491404476,5735,22,6084,0.00361604207758054,5.78468486302928E-065,21,22,"Artifact (8)"]
["UPN_Te4_003",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",8867,255,9731,0.0262049121364711,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",20.18,16.08,4352,243,4893,0.049662783568363,4515,12,4838,0.00248036378668871,1.01508561986991E-057,21,22,"Artifact (8)"]
["UPN_Te4_004",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",10588,372,11642,0.0319532726335681,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",19.95,15.25,5137,356,5838,0.0609797875984926,5451,16,5804,0.00275671950379049,5.95757423062757E-087,21,22,"Artifact (8)"]
["UPN_Te4_005",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",12086,341,13295,0.0256487401278676,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",20.12,15.44,5881,328,6657,0.0492714435932102,6205,13,6638,0.0019584212112082,3.48973818072605E-082,21,22,"Artifact (8)"]
["UPN_Te4_006",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",12483,417,13756,0.0303140447804594,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",20,15.95,6086,393,6904,0.0569235225955968,6397,24,6852,0.00350262697022767,7.31725475295617E-089,21,22,"Artifact (8)"]
["UPN_Te4_007",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",14995,469,16467,0.0284812048339102,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",20.15,16.29,7304,439,8272,0.0530705996131528,7691,30,8195,0.0036607687614399,1.27268884012173E-096,21,22,"Artifact (8)"]
["UPN_Te4_008",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",18076,611,19913,0.0306834731080199,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",20.03,15.58,8723,586,9986,0.0586821550170238,9353,25,9927,0.00251838420469427,4.70689222224871E-145,21,22,"Artifact (8)"]
["UPN_Te4_009",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",6361,184,6979,0.0263648087118498,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",19.81,16.02,3108,174,3498,0.0497427101200686,3253,10,3481,0.00287273771904625,1.13202848869775E-040,21,22,"Artifact (8)"]
["UPN_Te4_010",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",9362,252,10227,0.0246406570841889,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",19.86,16.19,4590,234,5144,0.0454898911353033,4772,18,5083,0.00354121581743065,4.65647661835981E-050,21,22,"Artifact (8)"]
["UPN_Te4_011",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",17639,293,19258,0.015214456329837,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",21.1,19.7,8758,237,9714,0.0243977764051884,8881,56,9544,0.00586756077116513,5.43903198800519E-028,21,22,"Artifact (9)"]
["UPN_Te4_012",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",6617,77,7003,0.0109952877338284,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",21.58,17.27,3171,67,3488,0.0192087155963303,3446,10,3515,0.00284495021337127,1.82395141808357E-012,21,22,"Artifact (10)"]
["UPN_Te4_013",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",3756,70,4109,0.0170357751277683,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",20.69,19.59,1852,58,2060,0.0281553398058252,1904,12,2049,0.00585651537335286,9.68473157941157E-009,21,22,"Artifact (10)"]
["UPN_Te4_014",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",19327,297,20970,0.0141630901287554,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",21.03,18.94,9566,255,10562,0.0241431547055482,9761,42,10408,0.00403535741737125,7.2220777203194E-039,21,22,"Artifact (10)"]
["UPN_Te4_015",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",11761,148,12733,0.0116233409251551,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",20.89,17.02,5828,133,6414,0.0207358902400998,5933,15,6319,0.00237379332172812,4.64100426811947E-025,21,22,"Artifact (10)"]
["UPN_Te4_016",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",12546,186,13625,0.013651376146789,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",20.8,18.62,6235,160,6872,0.0232828870779977,6311,26,6753,0.00385014067821709,5.74866359336939E-025,21,22,"Artifact (10)"]
["UPN_Te4_017",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",5098,57,5386,0.0105829929446714,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",21.87,19,2476,49,2702,0.0181347150259067,2622,8,2684,0.0029806259314456,9.14235359759399E-009,21,22,"Artifact (11)"]
["UPN_Te4_018",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",18748,286,20330,0.0140678799803246,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",20.9,19.19,9299,240,10231,0.0234581174860717,9449,46,10099,0.00455490642637885,3.13655354687067E-033,21,22,"Artifact (9)"]
["UPN_Te4_020",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",9734,108,10316,0.0104691740984878,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",21.67,17.44,4682,95,5158,0.0184179914695618,5052,13,5158,0.00252035672741373,5.50582948729435E-018,21,22,"Artifact (10)"]
["UPN_Te4_021",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",13192,157,13995,0.0112182922472312,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",21.61,18.75,6367,135,7001,0.0192829595772033,6825,22,6994,0.00314555333142694,9.19370417699356E-023,21,22,"Artifact (10)"]
["UPN_Te4_022",3,128204690,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser251Pro/c.751T>C",9083,119,9621,0.0123687766344455,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",21.71,18.24,4389,104,4825,0.0215544041450777,4694,15,4796,0.00312760633861551,6.35170395685461E-019,21,22,"Artifact (10)"]
["UPN_Te4_003",3,128204783,"T","C","GATA2","ENST00000341105","missense_variant","Agc/Ggc|p.Ser220Gly/c.658A>G",4974,74,5056,0.0146360759493671,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.036,"Tolerated",34.02,33.54,116,1,118,0.00847457627118644,4858,73,4938,0.0147833130822195,2,2,2,"Artifact (0)"]
["UPN_Te4_001",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",7609,572,8208,0.0696881091617934,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",31.85,31.52,370,2,373,0.00536193029490617,7239,570,7835,0.0727504786215699,2,22,22,"Artifact (6)"]
["UPN_Te4_002",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",5063,1177,6248,0.188380281690141,0,1,0,0,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",31.77,31.43,130,0,130,0,4933,1177,6118,0.192383131742399,2,22,22,"Artifact (5)"]
["UPN_Te4_003",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",4047,938,4999,0.187637527505501,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",31.81,31.36,113,1,114,0.0087719298245614,3934,937,4885,0.191811668372569,2,22,22,"Artifact (5)"]
["UPN_Te4_004",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",4660,1232,5908,0.208530805687204,0,1,0,0,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",31.8,31.52,61,0,61,0,4599,1232,5847,0.210706345134257,2,22,22,"Artifact (5)"]
["UPN_Te4_005",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",5501,1280,6809,0.187986488471141,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",31.79,31.38,128,1,131,0.00763358778625954,5373,1279,6678,0.191524408505541,2,22,22,"Artifact (5)"]
["UPN_Te4_006",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",5577,1381,6969,0.198163294590329,0,1,0,0,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",31.81,31.45,110,0,110,0,5467,1381,6859,0.201341303396997,2,22,22,"Artifact (5)"]
["UPN_Te4_007",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",6630,1841,8485,0.216971125515616,0,1,0,0,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",31.91,31.47,290,0,291,0,6340,1841,8194,0.224676592628753,2,22,22,"Artifact (5)"]
["UPN_Te4_008",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",8195,2004,10225,0.1959902200489,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",31.86,31.3,269,3,273,0.010989010989011,7926,2001,9952,0.201065112540193,2,22,22,"Artifact (5)"]
["UPN_Te4_009",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",2797,772,3582,0.215522054718035,0,1,0,0,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",31.71,31.45,70,0,70,0,2727,772,3512,0.219817767653759,2,22,22,"Artifact (5)"]
["UPN_Te4_010",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",4029,1140,5177,0.220204751786749,0,1,0,0,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",31.77,31.3,84,0,84,0,3945,1140,5093,0.223836638523464,2,22,22,"Artifact (5)"]
["UPN_Te4_011",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",9113,1047,10187,0.102778050456464,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",31.82,31.27,516,2,521,0.00383877159309021,8597,1045,9666,0.10811090420029,2,22,22,"Artifact (5)"]
["UPN_Te4_012",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",3514,219,3739,0.0585718106445574,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",32,31.56,227,0,228,0,3287,219,3511,0.0623753916263173,2,22,22,"Artifact (7)"]
["UPN_Te4_013",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",1988,184,2178,0.0844811753902663,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",31.92,31.61,104,0,104,0,1884,184,2074,0.0887174541947927,2,22,22,"Artifact (6)"]
["UPN_Te4_014",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",10035,958,11012,0.0869960043588812,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",31.82,31.35,451,2,459,0.00435729847494553,9584,956,10553,0.0905903534539941,2,22,22,"Artifact (6)"]
["UPN_Te4_015",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",6053,609,6692,0.0910041841004184,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",31.87,31.19,279,4,285,0.0140350877192982,5774,605,6407,0.0944279694084595,2,22,22,"Artifact (6)"]
["UPN_Te4_016",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",6615,586,7223,0.0811297244912086,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",31.87,31.05,342,1,345,0.00289855072463768,6273,585,6878,0.0850537947077639,2,22,22,"Artifact (6)"]
["UPN_Te4_017",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",2713,166,2883,0.0575789108567464,0,0,0,1,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",32.02,31.56,175,1,176,0.00568181818181818,2538,165,2707,0.0609530845954932,2,22,22,"Artifact (6)"]
["UPN_Te4_018",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",9582,987,10595,0.0931571495988674,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",31.85,31.2,361,1,365,0.00273972602739726,9221,986,10230,0.0963831867057674,2,22,22,"Artifact (6)"]
["UPN_Te4_019",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",2816,76,2896,0.0262430939226519,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",32,31.38,214,0,214,0,2602,76,2682,0.0283370618941089,2,22,22,"Artifact (6)"]
["UPN_Te4_020",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",5191,313,5511,0.0567954999092724,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",32.02,31.78,327,0,327,0,4864,313,5184,0.0603780864197531,2,22,22,"Artifact (7)"]
["UPN_Te4_021",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",7031,382,7421,0.0514755423797332,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",31.94,31.53,370,0,371,0,6661,382,7050,0.0541843971631206,2,22,22,"Artifact (7)"]
["UPN_Te4_022",3,128204807,"T","C","GATA2","ENST00000341105","missense_variant","Aag/Gag|p.Lys212Glu/c.634A>G",4855,264,5128,0.0514820592823713,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.452,"Tolerated",32.08,31.49,303,1,305,0.00327868852459016,4552,263,4823,0.0545303752850923,2,22,22,"Artifact (6)"]
["UPN_Te4_002",3,128204828,"C","CGTCAGTGACACCTGGTACT","GATA2","ENST00000341105","frameshift_variant+stop_gained","cga/cgaAGTACCAGGTGTCACTGAC|p.Gly205fs/c.612_613insAGTACCAGGTGTCACTGAC",140,"NA",140,"NA",1,0,0,0,0,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.77,"NA",131,"NA",131,"NA",9,"NA",9,"NA","NA",1,1,"Artifact (1)"]
["UPN_Te4_001",3,128204906,"T","G","GATA2","ENST00000341105","missense_variant","Aaa/Caa|p.Lys179Gln/c.535A>C",288,32,322,0.0993788819875776,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.288,"Deleterious",20.2,15.44,0,0,0,"NA",288,32,322,0.0993788819875776,1,10,10,"Artifact (2)"]
["UPN_Te4_007",3,128204906,"T","G","GATA2","ENST00000341105","missense_variant","Aaa/Caa|p.Lys179Gln/c.535A>C",213,34,247,0.137651821862348,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.288,"Deleterious",19.49,15.91,0,0,0,"NA",213,34,247,0.137651821862348,1,10,10,"Artifact (1)"]
["UPN_Te4_011",3,128204906,"T","G","GATA2","ENST00000341105","missense_variant","Aaa/Caa|p.Lys179Gln/c.535A>C",404,50,454,0.110132158590308,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.288,"Deleterious",21.37,15.62,0,0,0,"NA",404,50,454,0.110132158590308,1,10,10,"Artifact (1)"]
["UPN_Te4_016",3,128204906,"T","G","GATA2","ENST00000341105","missense_variant","Aaa/Caa|p.Lys179Gln/c.535A>C",254,30,286,0.104895104895105,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.288,"Deleterious",20.6,15.37,0,0,0,"NA",254,30,286,0.104895104895105,1,10,10,"Artifact (1)"]
["UPN_Te4_018",3,128204906,"T","G","GATA2","ENST00000341105","missense_variant","Aaa/Caa|p.Lys179Gln/c.535A>C",276,40,318,0.125786163522013,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.288,"Deleterious",19.02,15.85,1,0,1,0,275,40,317,0.126182965299685,1,10,10,"Artifact (1)"]
["UPN_Te4_001",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",160,164,325,0.504615384615385,0,1,1,1,1,0,1,0,5,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",16.1,16.72,0,0,0,"NA",160,164,325,0.504615384615385,1,55,55,"Artifact (3)"]
["UPN_Te4_002",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",46,60,106,0.566037735849057,0,1,1,1,1,0,1,0,5,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",16.35,16.5,0,0,0,"NA",46,60,106,0.566037735849057,1,55,55,"Artifact (3)"]
["UPN_Te4_003",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",46,42,88,0.477272727272727,0,1,1,1,1,0,1,0,5,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",15.65,16,0,0,0,"NA",46,42,88,0.477272727272727,1,55,55,"Artifact (3)"]
["UPN_Te4_005",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",66,51,117,0.435897435897436,0,1,1,1,1,0,1,0,5,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",16.26,15.65,0,0,0,"NA",66,51,117,0.435897435897436,1,55,55,"Artifact (3)"]
["UPN_Te4_006",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",46,51,97,0.525773195876289,0,1,1,1,1,0,1,0,5,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",14.57,15.51,0,0,0,"NA",46,51,97,0.525773195876289,1,55,55,"Artifact (7)"]
["UPN_Te4_007",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",149,99,250,0.396,0,0,1,1,1,0,1,0,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",16.19,15.73,0,0,0,"NA",149,99,250,0.396,1,55,55,"Artifact (4)"]
["UPN_Te4_008",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",128,96,226,0.424778761061947,0,1,1,1,1,0,1,0,5,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",15.14,16.35,0,0,0,"NA",128,96,226,0.424778761061947,1,55,55,"Artifact (3)"]
["UPN_Te4_009",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",31,27,58,0.46551724137931,0,0,0,1,1,0,1,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",15.74,15.41,0,0,0,"NA",31,27,58,0.46551724137931,1,55,55,"Artifact (4)"]
["UPN_Te4_010",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",43,34,77,0.441558441558442,0,0,0,1,1,0,1,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",15.65,15.62,0,0,0,"NA",43,34,77,0.441558441558442,1,55,55,"Artifact (4)"]
["UPN_Te4_011",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",230,227,461,0.492407809110629,0,1,1,1,1,0,1,0,5,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",16.3,15.77,0,0,0,"NA",230,227,461,0.492407809110629,1,55,55,"Artifact (3)"]
["UPN_Te4_012",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",155,65,221,0.294117647058824,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",16.63,15.14,0,0,0,"NA",155,65,221,0.294117647058824,1,55,55,"Artifact (4)"]
["UPN_Te4_013",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",43,46,90,0.511111111111111,0,1,1,1,1,0,1,0,5,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",14.6,16.02,0,0,0,"NA",43,46,90,0.511111111111111,1,55,55,"Artifact (7)"]
["UPN_Te4_014",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",212,190,404,0.47029702970297,0,1,1,1,1,0,1,0,5,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",15.58,16.09,0,0,0,"NA",212,190,404,0.47029702970297,1,55,55,"Artifact (3)"]
["UPN_Te4_015",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",131,120,254,0.47244094488189,0,1,1,1,1,0,1,0,5,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",15.37,16.29,0,0,0,"NA",131,120,254,0.47244094488189,1,55,55,"Artifact (3)"]
["UPN_Te4_016",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",146,139,286,0.486013986013986,0,0,1,1,1,0,1,0,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",15.36,15.52,0,0,0,"NA",146,139,286,0.486013986013986,1,55,55,"Artifact (4)"]
["UPN_Te4_018",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",159,159,319,0.498432601880878,0,1,1,1,1,0,1,0,5,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",16.65,15.67,0,0,0,"NA",159,159,319,0.498432601880878,1,55,55,"Artifact (3)"]
["UPN_Te4_019",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",173,41,214,0.191588785046729,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",17.68,15.41,0,0,0,"NA",173,41,214,0.191588785046729,1,55,55,"Artifact (4)"]
["UPN_Te4_022",3,128204915,"T","G","GATA2","ENST00000341105","missense_variant","Acg/Ccg|p.Thr176Pro/c.526A>C",234,67,302,0.221854304635762,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.821,"Deleterious",16.91,16.07,0,0,0,"NA",234,67,302,0.221854304635762,1,55,55,"Artifact (4)"]
["UPN_Te4_010",3,128204968,"G","A","GATA2","ENST00000341105","missense_variant","tCc/tTc|p.Ser158Phe/c.473C>T",2795,29,2827,0.0102582242660064,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.62,"Tolerated",35.59,35.48,2713,29,2745,0.0105646630236794,82,0,82,0,2,2,2,"Artifact (0)"]
["UPN_Te4_014",3,128204991,"TC","T","GATA2","ENST00000341105","frameshift_variant","ggg/|p.Gly150fs/c.445delG",5650,66,5760,0.0114583333333333,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.06,"NA",5205,63,5312,0.0118599397590361,445,3,448,0.00669642857142857,2,1,1,"Artifact (4)"]
["UPN_Te4_009",3,128205002,"C","A","GATA2","ENST00000341105","missense_variant","Ggg/Tgg|p.Gly147Trp/c.439G>T",1603,20,1627,0.0122925629993854,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.058,"Tolerated",34.15,31.1,1559,1,1564,0.000639386189258312,44,19,63,0.301587301587302,2,1,1,"Artifact (4)"]
["UPN_Te4_005",3,128205008,"C","T","GATA2","ENST00000341105","missense_variant","Ggg/Agg|p.Gly145Arg/c.433G>A",3477,38,3517,0.0108046630651123,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.008,"Tolerated",33.33,29.87,3477,38,3517,0.0108046630651123,0,0,0,"NA",1,1,1,"Artifact (2)"]
["UPN_Te4_018",3,128205056,"A","G","GATA2","ENST00000341105","missense_variant","Tca/Cca|p.Ser129Pro/c.385T>C",7534,85,7785,0.0109184328837508,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.559,"Tolerated",26.87,27.71,3786,50,3878,0.0128932439401753,3748,35,3907,0.00895828001023804,0.127051084889508,1,1,"Artifact (4)"]
["UPN_Te4_007",3,128205077,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser122Pro/c.364T>C",6559,127,6822,0.0186162415713867,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.82,"Tolerated",28.34,21.41,3118,104,3315,0.0313725490196078,3441,23,3507,0.0065583119475335,4.15272980668071E-015,2,2,"Artifact (4)"]
["UPN_Te4_011",3,128205077,"A","G","GATA2","ENST00000341105","missense_variant","Tcc/Ccc|p.Ser122Pro/c.364T>C",8195,91,8466,0.0107488778643988,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.82,"Tolerated",28.77,23.95,3978,69,4176,0.0165229885057471,4217,22,4290,0.00512820512820513,2.15319471438589E-007,2,2,"Artifact (4)"]
["UPN_Te4_004",3,128205079,"A","G","GATA2","ENST00000341105","missense_variant","tTc/tCc|p.Phe121Ser/c.362T>C",4558,84,4713,0.0178230426479949,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.055,"Deleterious",26.15,20.13,2180,71,2294,0.0309503051438535,2378,13,2419,0.00537412153782555,5.0940384072544E-012,4,5,"Artifact (5)"]
["UPN_Te4_009",3,128205079,"A","G","GATA2","ENST00000341105","missense_variant","tTc/tCc|p.Phe121Ser/c.362T>C",2926,40,3034,0.01318391562294,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.055,"Deleterious",26.21,19.5,1411,35,1484,0.0235849056603774,1515,5,1550,0.0032258064516129,4.47733679459115E-007,4,5,"Artifact (6)"]
["UPN_Te4_011",3,128205079,"A","G","GATA2","ENST00000341105","missense_variant","tTc/tCc|p.Phe121Ser/c.362T>C",8134,97,8462,0.011463011108485,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.055,"Deleterious",26.04,24.84,3961,72,4172,0.0172579098753595,4173,25,4290,0.00582750582750583,5.53196522347635E-007,4,5,"Artifact (5)"]
["UPN_Te4_014",3,128205079,"A","G","GATA2","ENST00000341105","missense_variant","tTc/tCc|p.Phe121Ser/c.362T>C",9957,105,10319,0.0101754045934684,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.055,"Deleterious",26.31,20.18,4837,89,5104,0.0174373040752351,5120,16,5215,0.00306807286673058,2.47997620700307E-014,4,5,"Artifact (5)"]
["UPN_Te4_009",3,128205079,"A","T","GATA2","ENST00000341105","missense_variant","tTc/tAc|p.Phe121Tyr/c.362T>A",2926,38,3034,0.012524719841793,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.124,"Tolerated",26.21,19.95,1411,12,1484,0.00808625336927224,1515,26,1550,0.0167741935483871,0.0492649544382818,1,5,"Artifact (4)"]
["UPN_Te4_015",3,128205138,"GC","G","GATA2","ENST00000341105","frameshift_variant","ggg/|p.Gly101fs/c.298delG",2643,28,2682,0.0104399701715138,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.78,"NA",0,0,0,"NA",2643,28,2682,0.0104399701715138,1,1,1,"Artifact (5)"]
["UPN_Te4_010",3,128205143,"C","T","GATA2","ENST00000341105","missense_variant","Ggg/Agg|p.Gly100Arg/c.298G>A",2679,30,2714,0.0110537951363301,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.014,"Tolerated",35.13,34.77,0,0,0,"NA",2679,30,2714,0.0110537951363301,1,1,1,"Artifact (3)"]
["UPN_Te4_004",3,128205151,"C","A","GATA2","ENST00000341105","missense_variant","tGg/tTg|p.Trp97Leu/c.290G>T",2431,35,2487,0.0140731805388018,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-8.098,"Deleterious",34.91,31.17,7,34,57,0.596491228070175,2424,1,2430,0.000411522633744856,1.36878667658344E-068,1,1,"Artifact (4)"]
["UPN_Te4_001",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",11926,606,12583,0.0481602161646666,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.49,31.23,8274,600,8901,0.0674081563869228,3652,6,3682,0.00162954915806627,2.68423014546097E-082,22,22,"Artifact (6)"]
["UPN_Te4_002",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",9706,1676,11418,0.14678577684358,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.58,31.47,6860,1673,8560,0.195443925233645,2846,3,2858,0.00104968509447166,1.24393059265882E-222,22,22,"Artifact (5)"]
["UPN_Te4_003",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",7814,1170,9007,0.129898967469746,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.67,31.47,5260,1164,6434,0.180913894933168,2554,6,2573,0.00233190827827439,5.97677954916103E-172,22,22,"Artifact (5)"]
["UPN_Te4_004",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",9112,1615,10754,0.15017667844523,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.45,31.35,6695,1613,8324,0.193777030273907,2417,2,2430,0.000823045267489712,5.1165233978026E-192,22,22,"Artifact (5)"]
["UPN_Te4_005",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",10672,1693,12392,0.136620400258231,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.75,31.36,7173,1683,8874,0.189655172413793,3499,10,3518,0.00284252416145537,1.06385865654053E-245,22,22,"Artifact (4)"]
["UPN_Te4_006",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",10788,1763,12579,0.140154225296128,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.66,31.43,7534,1751,9305,0.188178398710371,3254,12,3274,0.00366524129505192,1.52873238016529E-226,22,22,"Artifact (4)"]
["UPN_Te4_007",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",13666,2555,16287,0.156873580155953,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.45,31.38,10171,2548,12769,0.199545774923643,3495,7,3518,0.00198976691301876,7.75589122413496E-281,22,22,"Artifact (5)"]
["UPN_Te4_008",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",14517,2218,16763,0.13231521803973,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.8,31.41,9683,2206,11905,0.18530029399412,4834,12,4858,0.00247015232606011,0,22,22,"Artifact (4)"]
["UPN_Te4_009",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",4885,826,5726,0.144254278728606,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.71,31.31,3334,821,4163,0.197213547922172,1551,5,1563,0.00319897632757518,1.08354263914468E-114,22,22,"Artifact (5)"]
["UPN_Te4_010",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",9056,1557,10659,0.146073740500985,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.6,31.36,6353,1553,7944,0.195493454179255,2703,4,2715,0.00147329650092081,6.10906469546629E-209,22,22,"Artifact (5)"]
["UPN_Te4_011",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",15056,1208,16320,0.0740196078431373,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.42,31.32,10751,1199,11982,0.100066766816892,4305,9,4338,0.0020746887966805,3.85400251643947E-151,22,22,"Artifact (6)"]
["UPN_Te4_012",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",5281,243,5530,0.0439421338155515,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.56,31.36,3997,241,4243,0.0567994343624794,1284,2,1287,0.00155400155400155,9.99195751578576E-026,22,22,"Artifact (6)"]
["UPN_Te4_013",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",3216,205,3429,0.0597841936424614,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.41,30.8,2337,201,2544,0.0790094339622641,879,4,885,0.00451977401129944,8.58184360188045E-022,22,22,"Artifact (6)"]
["UPN_Te4_014",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",16243,1026,17323,0.059227616463661,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.54,31.27,11039,1009,12074,0.083567997349677,5204,17,5249,0.00323871213564488,6.43222586996926E-136,22,22,"Artifact (5)"]
["UPN_Te4_015",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",10343,631,11011,0.0573063300336028,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.28,31.42,7684,621,8325,0.0745945945945946,2659,10,2686,0.00372300819061802,8.6276353878474E-063,22,22,"Artifact (5)"]
["UPN_Te4_016",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",11042,675,11778,0.0573102394294447,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.42,31.1,7793,666,8489,0.0784544704912239,3249,9,3289,0.00273639404074187,6.07788365997625E-083,22,22,"Artifact (6)"]
["UPN_Te4_017",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",5359,242,5612,0.0431218816821098,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.62,31.1,3911,237,4156,0.0570259865255053,1448,5,1456,0.00343406593406593,3.09723053977615E-025,22,22,"Artifact (6)"]
["UPN_Te4_018",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",14545,954,15551,0.0613465372001801,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.35,31.09,10611,943,11589,0.0813702649063767,3934,11,3962,0.002776375567895,1.85182606105648E-106,22,22,"Artifact (5)"]
["UPN_Te4_019",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",4978,121,5106,0.0236976106541324,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.69,31.76,3692,112,3808,0.0294117647058824,1286,9,1298,0.00693374422187982,4.27393764622376E-007,22,22,"Artifact (6)"]
["UPN_Te4_020",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",6740,361,7109,0.050780700520467,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.11,31.37,5852,358,6216,0.0575933075933076,888,3,893,0.00335946248600224,1.2750534464366E-017,22,22,"Artifact (6)"]
["UPN_Te4_021",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",9338,345,9698,0.0355743452258198,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.51,31.27,7194,341,7548,0.0451775304716481,2144,4,2150,0.00186046511627907,4.24269857577661E-032,22,22,"Artifact (6)"]
["UPN_Te4_022",3,128205152,"A","G","GATA2","ENST00000341105","missense_variant","Tgg/Cgg|p.Trp97Arg/c.289T>C",8048,307,8363,0.0367093148391725,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-9.076,"Deleterious",32.65,31.73,6029,303,6339,0.0477993374349266,2019,4,2024,0.00197628458498024,1.123188522419E-031,22,22,"Artifact (6)"]
["UPN_Te4_011",3,128205741,"A","T","GATA2","ENST00000341105","missense_variant","gTg/gAg|p.Val45Glu/c.134T>A",18204,192,18578,0.0103348046076004,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.496,"Tolerated",26.15,19.76,9205,33,9391,0.00351400276860824,8999,159,9187,0.0173070643300316,1.66671339094836E-021,3,3,"Artifact (4)"]
["UPN_Te4_013",3,128205741,"A","T","GATA2","ENST00000341105","missense_variant","gTg/gAg|p.Val45Glu/c.134T>A",3345,51,3437,0.0148385219668315,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.496,"Tolerated",26.31,26.22,1686,16,1736,0.00921658986175115,1659,35,1701,0.0205761316872428,0.00721824054981181,3,3,"Artifact (3)"]
["UPN_Te4_014",3,128205741,"A","T","GATA2","ENST00000341105","missense_variant","gTg/gAg|p.Val45Glu/c.134T>A",18129,198,18484,0.0107119671066869,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.496,"Tolerated",26.21,20.15,9159,33,9322,0.00354001287277408,8970,165,9162,0.0180091683038638,7.71658384741594E-023,3,3,"Artifact (4)"]
["UPN_Te4_013",3,128205774,"A","T","GATA2","ENST00000341105","missense_variant","aTg/aAg|p.Met34Lys/c.101T>A",1676,25,1710,0.0146198830409357,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.905,"Tolerated",33.51,26.68,0,0,0,"NA",1676,25,1710,0.0146198830409357,1,1,1,"Artifact (1)"]
["UPN_Te4_002",3,128205820,"C","G","GATA2","ENST00000341105","missense_variant","Gcg/Ccg|p.Ala19Pro/c.55G>C",6783,127,6932,0.0183208309290248,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.767,"Tolerated",34.06,31.31,2285,125,2420,0.0516528925619835,4498,2,4512,0.000443262411347518,2.72943449014779E-055,10,10,"Artifact (8)"]
["UPN_Te4_003",3,128205820,"C","G","GATA2","ENST00000341105","missense_variant","Gcg/Ccg|p.Ala19Pro/c.55G>C",6375,128,6516,0.0196439533456108,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.767,"Tolerated",34.06,31.07,2249,124,2381,0.0520789584208316,4126,4,4135,0.000967351874244256,1.21082906744695E-049,10,10,"Artifact (8)"]
["UPN_Te4_004",3,128205820,"C","G","GATA2","ENST00000341105","missense_variant","Gcg/Ccg|p.Ala19Pro/c.55G>C",5789,147,5951,0.024701730801546,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.767,"Tolerated",33.83,31.25,2120,146,2277,0.0641194554238032,3669,1,3674,0.000272182906913446,4.13163302256291E-061,10,10,"Artifact (6)"]
["UPN_Te4_005",3,128205820,"C","G","GATA2","ENST00000341105","missense_variant","Gcg/Ccg|p.Ala19Pro/c.55G>C",8468,164,8655,0.01894858463316,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.767,"Tolerated",33.89,31.76,3150,160,3325,0.0481203007518797,5318,4,5330,0.00075046904315197,1.00907557994726E-061,10,10,"Artifact (7)"]
["UPN_Te4_006",3,128205820,"C","G","GATA2","ENST00000341105","missense_variant","Gcg/Ccg|p.Ala19Pro/c.55G>C",9135,195,9358,0.0208377858516777,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.767,"Tolerated",33.8,31.48,3816,191,4018,0.047536087605774,5319,4,5340,0.000749063670411985,3.77393080908105E-065,10,10,"Artifact (6)"]
["UPN_Te4_007",3,128205820,"C","G","GATA2","ENST00000341105","missense_variant","Gcg/Ccg|p.Ala19Pro/c.55G>C",8180,168,8366,0.0200812813770022,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.767,"Tolerated",34.16,31.48,2562,166,2732,0.0607613469985359,5618,2,5634,0.00035498757543486,4.80940669591792E-079,10,10,"Artifact (6)"]
["UPN_Te4_008",3,128205820,"C","G","GATA2","ENST00000341105","missense_variant","Gcg/Ccg|p.Ala19Pro/c.55G>C",11707,236,11998,0.0196699449908318,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.767,"Tolerated",34,31.56,4017,231,4275,0.0540350877192982,7690,5,7723,0.000647416806940308,2.30560889375392E-097,10,10,"Artifact (7)"]
["UPN_Te4_009",3,128205820,"C","G","GATA2","ENST00000341105","missense_variant","Gcg/Ccg|p.Ala19Pro/c.55G>C",3993,78,4089,0.0190755685986794,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.767,"Tolerated",33.97,31.77,1491,77,1578,0.0487959442332066,2502,1,2511,0.000398247710075667,1.89363926534071E-031,10,10,"Artifact (8)"]
["UPN_Te4_010",3,128205820,"C","G","GATA2","ENST00000341105","missense_variant","Gcg/Ccg|p.Ala19Pro/c.55G>C",6661,172,6849,0.0251131552051394,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.767,"Tolerated",33.95,31.53,2528,171,2707,0.0631695603989656,4133,1,4142,0.000241429261226461,3.88055723843796E-069,10,10,"Artifact (6)"]
["UPN_Te4_011",3,128205820,"C","G","GATA2","ENST00000341105","missense_variant","Gcg/Ccg|p.Ala19Pro/c.55G>C",14178,145,14377,0.0100855533143215,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.767,"Tolerated",33.61,30.31,4946,135,5100,0.0264705882352941,9232,10,9277,0.00107793467715856,6.38002812958615E-049,10,10,"Artifact (7)"]
["UPN_Te4_002",3,128205847,"AG","A","GATA2","ENST00000341105","frameshift_variant","cgc/|p.Trp10fs/c.27delC",6859,71,6949,0.0102172974528709,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.47,"NA",2434,0,2436,0,4425,71,4513,0.0157323288278307,2,4,4,"Artifact (6)"]
["UPN_Te4_009",3,128205847,"AG","A","GATA2","ENST00000341105","frameshift_variant","cgc/|p.Trp10fs/c.27delC",4029,45,4098,0.0109809663250366,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.48,"NA",1581,0,1586,0,2448,45,2512,0.0179140127388535,2,4,4,"Artifact (6)"]
["UPN_Te4_012",3,128205847,"AG","A","GATA2","ENST00000341105","frameshift_variant","cgc/|p.Trp10fs/c.27delC",4763,57,4833,0.0117939168218498,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.52,"NA",1612,0,1613,0,3151,57,3220,0.0177018633540373,2,4,4,"Artifact (6)"]
["UPN_Te4_018",3,128205847,"AG","A","GATA2","ENST00000341105","frameshift_variant","cgc/|p.Trp10fs/c.27delC",15138,157,15346,0.0102306790043008,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.38,"NA",5656,0,5674,0,9482,157,9672,0.016232423490488,2,4,4,"Artifact (6)"]
["UPN_Te4_008",3,128205859,"CG","C","GATA2","ENST00000341105","frameshift_variant","ccc/|p.Glu6fs/c.14delC",9958,126,12026,0.010477299185099,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.46,"NA",2400,0,4305,0,7558,126,7721,0.0163191296464189,2,1,1,"Artifact (4)"]
["UPN_Te4_001",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",11082,565,11715,0.0482287665386257,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",32.62,31.51,3664,13,3713,0.00350121195798546,7418,552,8002,0.0689827543114221,2,22,22,"Artifact (5)"]
["UPN_Te4_002",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",5979,896,6888,0.130081300813008,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.12,31.58,2418,5,2433,0.0020550760378134,3561,891,4455,0.2,2,22,22,"Artifact (4)"]
["UPN_Te4_003",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",5776,761,6556,0.11607687614399,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.12,31.86,2415,5,2434,0.00205423171733772,3361,756,4122,0.183406113537118,2,22,22,"Artifact (4)"]
["UPN_Te4_004",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",5154,710,5880,0.120748299319728,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.23,31.84,2278,14,2303,0.0060790273556231,2876,696,3577,0.194576460721275,2,22,22,"Artifact (4)"]
["UPN_Te4_005",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",7620,991,8638,0.114725630933086,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.2,31.61,3338,5,3360,0.00148809523809524,4282,986,5278,0.186813186813187,2,22,22,"Artifact (4)"]
["UPN_Te4_006",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",8339,990,9355,0.1058257616248,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.41,31.69,4046,14,4077,0.00343389747363257,4293,976,5278,0.184918529746116,2,22,22,"Artifact (4)"]
["UPN_Te4_007",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",7229,1044,8290,0.125934861278649,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.04,31.63,2737,5,2752,0.00181686046511628,4492,1039,5538,0.187612856626941,2,22,22,"Artifact (4)"]
["UPN_Te4_008",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",10493,1434,11964,0.119859578736209,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.15,31.6,4272,7,4304,0.00162639405204461,6221,1427,7660,0.186292428198433,2,22,22,"Artifact (4)"]
["UPN_Te4_009",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",3545,501,4056,0.123520710059172,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.25,31.54,1575,4,1586,0.00252206809583859,1970,497,2470,0.201214574898785,2,22,22,"Artifact (4)"]
["UPN_Te4_010",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",5993,841,6851,0.12275580207269,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.31,31.63,2756,6,2774,0.00216294160057678,3237,835,4077,0.204807456463086,2,22,22,"Artifact (4)"]
["UPN_Te4_011",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",13356,886,14292,0.0619927232017912,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",32.86,31.59,5113,17,5162,0.0032932971716389,8243,869,9130,0.0951807228915663,2,22,22,"Artifact (5)"]
["UPN_Te4_012",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",4616,173,4796,0.0360717264386989,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.01,31.72,1605,4,1613,0.00247985120892746,3011,169,3183,0.0530945648759032,2,22,22,"Artifact (5)"]
["UPN_Te4_013",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",2475,127,2611,0.0486403676752202,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",32.73,31.61,913,4,921,0.00434310532030402,1562,123,1690,0.0727810650887574,2,22,22,"Artifact (5)"]
["UPN_Te4_014",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",12932,780,13761,0.0566819271855243,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",32.63,31.55,4569,21,4618,0.00454742312689476,8363,759,9143,0.0830143279011265,2,22,22,"Artifact (5)"]
["UPN_Te4_015",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",7952,522,8520,0.0612676056338028,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",32.58,31.33,2521,5,2556,0.00195618153364632,5431,517,5964,0.0866867873910127,2,22,22,"Artifact (5)"]
["UPN_Te4_016",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",8679,464,9171,0.0505942645294951,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",32.76,31.81,3212,5,3234,0.0015460729746444,5467,459,5937,0.0773117736230419,2,22,22,"Artifact (5)"]
["UPN_Te4_017",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",3586,148,3743,0.0395404755543682,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",32.92,31.89,1125,3,1132,0.00265017667844523,2461,145,2611,0.0555342780543853,2,22,22,"Artifact (5)"]
["UPN_Te4_018",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",14343,826,15239,0.0542030316949931,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",32.84,31.51,5612,19,5673,0.00334919795522651,8731,807,9566,0.0843612795316747,2,22,22,"Artifact (5)"]
["UPN_Te4_019",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",3998,70,4074,0.0171821305841924,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.01,31.99,1374,1,1377,0.000726216412490922,2624,69,2697,0.0255839822024472,2,22,22,"Artifact (7)"]
["UPN_Te4_020",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",6857,282,7149,0.0394460763743181,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.01,31.68,2441,9,2454,0.00366748166259169,4416,273,4695,0.05814696485623,2,22,22,"Artifact (5)"]
["UPN_Te4_021",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",10559,309,10891,0.0283720503167753,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.17,31.49,4111,12,4137,0.00290065264684554,6448,297,6754,0.0439739413680782,2,22,22,"Artifact (5)"]
["UPN_Te4_022",3,128205874,"T","C","GATA2","ENST00000341105","start_lost","Atg/Gtg|p.Met1?/c.1A>G",6893,248,7148,0.0346950195858981,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.24,31.59,2701,2,2706,0.00073909830007391,4192,246,4442,0.0553804592525889,2,22,22,"Artifact (5)"]
["UPN_Te4_010",3,128205882,"G","A","GATA2","ENST00000341105","5_prime_UTR_premature_start_codon_gain_variant","|c.-8C>T",2737,29,2773,0.0104579877389109,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.31,35.86,2737,29,2773,0.0104579877389109,0,0,0,"NA",1,1,1,"Artifact (3)"]
["UPN_Te4_001",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",25557,364,25991,0.0140048478319418,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.98,31.51,12349,14,12415,0.00112766814337495,13208,350,13576,0.0257807896287566,2,21,21,"Artifact (7)"]
["UPN_Te4_002",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",31015,576,31663,0.0181915800776932,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.29,32.73,11282,7,11319,0.000618429189857761,19733,569,20344,0.027968934329532,2,21,21,"Artifact (7)"]
["UPN_Te4_003",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",19361,384,19781,0.0194125676153885,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.2,33.13,8194,6,8216,0.000730282375851996,11167,378,11565,0.0326848249027237,2,21,21,"Artifact (7)"]
["UPN_Te4_004",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",23140,314,23517,0.0133520432027895,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.2,32.9,10211,7,10262,0.000682128240109141,12929,307,13255,0.0231610712938514,2,21,21,"Artifact (7)"]
["UPN_Te4_005",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",28284,479,28817,0.0166221327688517,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.21,32.21,12318,16,12358,0.00129470788153423,15966,463,16459,0.0281305061060818,2,21,21,"Artifact (7)"]
["UPN_Te4_006",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",29703,696,30473,0.0228398910510944,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.29,32.78,11227,11,11267,0.000976302476258099,18476,685,19206,0.0356659377277934,2,21,21,"Artifact (5)"]
["UPN_Te4_007",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",31715,397,32166,0.0123422247093204,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.25,32.19,13243,3,13281,0.000225886604924328,18472,394,18885,0.0208631188774159,2,21,21,"Artifact (8)"]
["UPN_Te4_008",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",35293,597,35943,0.0166096319172022,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.26,33.04,12511,8,12536,0.000638162093171666,22782,589,23407,0.0251634126543342,2,21,21,"Artifact (8)"]
["UPN_Te4_009",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",11564,247,11837,0.0208667736757624,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.26,32.51,4703,5,4726,0.00105797714769361,6861,242,7111,0.0340317817465898,2,21,21,"Artifact (5)"]
["UPN_Te4_010",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",30255,659,30975,0.0212752219531881,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.25,32.98,12193,12,12238,0.000980552377839516,18062,647,18737,0.0345306078881358,2,21,21,"Artifact (5)"]
["UPN_Te4_011",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",28774,577,29414,0.019616509145305,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.01,32.16,14306,13,14364,0.000905040378724589,14468,564,15050,0.0374750830564784,2,21,21,"Artifact (7)"]
["UPN_Te4_012",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",11494,152,11667,0.0130281991943087,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.36,33.53,6416,5,6433,0.00077724234416291,5078,147,5234,0.0280855941918227,2,21,21,"Artifact (7)"]
["UPN_Te4_013",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",14729,223,14987,0.0148795622873157,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.95,32.13,6944,5,6962,0.000718184429761563,7785,218,8025,0.0271651090342679,2,21,21,"Artifact (7)"]
["UPN_Te4_014",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",29582,453,30121,0.0150393413233292,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35,31.89,14389,14,14456,0.000968456004427227,15193,439,15665,0.0280242578997766,2,21,21,"Artifact (7)"]
["UPN_Te4_015",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",18466,266,18782,0.014162496006815,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.95,32.21,9701,9,9742,0.000923834941490454,8765,257,9040,0.028429203539823,2,21,21,"Artifact (7)"]
["UPN_Te4_016",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",21530,375,21977,0.0170632934431451,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.99,32.09,10990,12,11049,0.00108607113765952,10540,363,10928,0.0332174231332357,2,21,21,"Artifact (7)"]
["UPN_Te4_017",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",14732,152,14908,0.0101958679903408,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.34,33.07,8019,0,8037,0,6713,152,6871,0.0221219618687236,2,21,21,"Artifact (8)"]
["UPN_Te4_018",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",26786,496,27381,0.0181147511047807,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.94,32.22,13854,14,13938,0.00100444827091405,12932,482,13443,0.0358550918693744,2,21,21,"Artifact (7)"]
["UPN_Te4_020",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",17229,204,17474,0.0116744878104613,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.36,33.39,8773,5,8799,0.000568246391635413,8456,199,8675,0.0229394812680115,2,21,21,"Artifact (7)"]
["UPN_Te4_021",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",15431,175,15638,0.0111906893464637,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.37,32.89,7692,4,7717,0.00051833614098743,7739,171,7921,0.0215881833101881,2,21,21,"Artifact (7)"]
["UPN_Te4_022",4,55561851,"G","T","KIT","ENST00000288135","stop_gained","Gaa/Taa|p.Glu81*/c.241G>T",18373,251,18673,0.013441867937664,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.33,33.04,10542,5,10579,0.000472634464505152,7831,246,8094,0.0303928836174944,2,21,21,"Artifact (7)"]
["UPN_Te4_015",4,55561867,"A","G","KIT","ENST00000288135","missense_variant","aAg/aGg|p.Lys86Arg/c.257A>G",18517,188,18768,0.0100170502983802,0,0,0,1,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.354,"Tolerated",34.13,35.03,9623,85,9745,0.00872242175474602,8894,103,9023,0.0114152720824559,2,1,1,"Artifact (3)"]
["UPN_Te4_002",4,55561875,"G","C","KIT","ENST00000288135","missense_variant","Gcc/Ccc|p.Ala89Pro/c.265G>C",30878,561,31513,0.0178021768793831,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.529,"Tolerated",32.75,31.25,11268,13,11319,0.00114851135259299,19610,548,20194,0.0271367732989997,2,9,9,"Artifact (5)"]
["UPN_Te4_003",4,55561875,"G","C","KIT","ENST00000288135","missense_variant","Gcc/Ccc|p.Ala89Pro/c.265G>C",19223,337,19646,0.0171536190573145,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.529,"Tolerated",32.86,30.81,8165,14,8216,0.00170399221032132,11058,323,11430,0.0282589676290464,2,9,9,"Artifact (5)"]
["UPN_Te4_004",4,55561875,"G","C","KIT","ENST00000288135","missense_variant","Gcc/Ccc|p.Ala89Pro/c.265G>C",22893,439,23403,0.0187582788531385,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.529,"Tolerated",32.99,30.9,10215,15,10260,0.00146198830409357,12678,424,13143,0.0322605189074032,2,9,9,"Artifact (6)"]
["UPN_Te4_005",4,55561875,"G","C","KIT","ENST00000288135","missense_variant","Gcc/Ccc|p.Ala89Pro/c.265G>C",28119,464,28659,0.0161903764960396,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.529,"Tolerated",32.91,31.23,12298,13,12353,0.00105237594106695,15821,451,16306,0.0276585306022323,2,9,9,"Artifact (5)"]
["UPN_Te4_006",4,55561875,"G","C","KIT","ENST00000288135","missense_variant","Gcc/Ccc|p.Ala89Pro/c.265G>C",29671,507,30288,0.0167393026941363,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.529,"Tolerated",32.79,31.09,11210,11,11265,0.00097647581003107,18461,496,19023,0.0260737002575829,2,9,9,"Artifact (5)"]
["UPN_Te4_007",4,55561875,"G","C","KIT","ENST00000288135","missense_variant","Gcc/Ccc|p.Ala89Pro/c.265G>C",31332,610,32016,0.0190529735132434,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.529,"Tolerated",32.88,31.07,13229,16,13278,0.00120500075312547,18103,594,18738,0.031700288184438,2,9,9,"Artifact (5)"]
["UPN_Te4_008",4,55561875,"G","C","KIT","ENST00000288135","missense_variant","Gcc/Ccc|p.Ala89Pro/c.265G>C",34935,724,35753,0.0202500489469415,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.529,"Tolerated",32.73,31.17,12494,9,12538,0.000717817833785293,22441,715,23215,0.0307990523368512,2,9,9,"Artifact (4)"]
["UPN_Te4_009",4,55561875,"G","C","KIT","ENST00000288135","missense_variant","Gcc/Ccc|p.Ala89Pro/c.265G>C",11504,212,11747,0.0180471609772708,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.529,"Tolerated",32.9,31.15,4706,4,4726,0.000846381718154888,6798,208,7021,0.0296254094858282,2,9,9,"Artifact (6)"]
["UPN_Te4_010",4,55561875,"G","C","KIT","ENST00000288135","missense_variant","Gcc/Ccc|p.Ala89Pro/c.265G>C",30133,671,30859,0.0217440616999903,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.529,"Tolerated",32.87,31.01,12190,19,12241,0.00155216077117883,17943,652,18618,0.0350198732409496,2,9,9,"Artifact (3)"]
["UPN_Te4_002",4,55593628,"G","C","KIT","ENST00000288135","missense_variant","gGa/gCa|p.Gly565Ala/c.1694G>C",35447,1074,36642,0.0293106271491731,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.205,"Deleterious",33.57,31.26,23904,25,24008,0.00104131956014662,11543,1049,12634,0.0830299192654741,2,15,15,"Artifact (4)"]
["UPN_Te4_003",4,55593628,"G","C","KIT","ENST00000288135","missense_variant","gGa/gCa|p.Gly565Ala/c.1694G>C",26039,712,26816,0.0265513126491647,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.205,"Deleterious",33.54,31.26,17539,14,17602,0.000795364163163277,8500,698,9214,0.0757542869546343,2,15,15,"Artifact (4)"]
["UPN_Te4_004",4,55593628,"G","C","KIT","ENST00000288135","missense_variant","gGa/gCa|p.Gly565Ala/c.1694G>C",31448,1025,32587,0.0314542609015865,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.205,"Deleterious",33.55,31.33,20897,13,20983,0.000619549158842873,10551,1012,11604,0.0872113064460531,2,15,15,"Artifact (4)"]
["UPN_Te4_005",4,55593628,"G","C","KIT","ENST00000288135","missense_variant","gGa/gCa|p.Gly565Ala/c.1694G>C",38705,1070,39897,0.0268190590771236,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.205,"Deleterious",33.58,31.34,26340,17,26433,0.000643135474596149,12365,1053,13464,0.0782085561497326,2,15,15,"Artifact (4)"]
["UPN_Te4_006",4,55593628,"G","C","KIT","ENST00000288135","missense_variant","gGa/gCa|p.Gly565Ala/c.1694G>C",35617,894,36617,0.0244148892590873,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.205,"Deleterious",33.58,30.98,23815,26,23895,0.00108809374346098,11802,868,12722,0.0682282659959126,2,15,15,"Artifact (4)"]
["UPN_Te4_007",4,55593628,"G","C","KIT","ENST00000288135","missense_variant","gGa/gCa|p.Gly565Ala/c.1694G>C",42358,1293,43761,0.0295468567902927,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.205,"Deleterious",33.56,31.16,28854,26,28953,0.00089800711497945,13504,1267,14808,0.0855618584548893,2,15,15,"Artifact (4)"]
["UPN_Te4_008",4,55593628,"G","C","KIT","ENST00000288135","missense_variant","gGa/gCa|p.Gly565Ala/c.1694G>C",41647,948,42734,0.0221837412832873,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.205,"Deleterious",33.81,31.13,31187,18,31304,0.000575006388959877,10460,930,11430,0.0813648293963255,2,15,15,"Artifact (4)"]
["UPN_Te4_009",4,55593628,"G","C","KIT","ENST00000288135","missense_variant","gGa/gCa|p.Gly565Ala/c.1694G>C",15002,497,15554,0.031953195319532,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.205,"Deleterious",33.54,31.2,9852,6,9900,0.000606060606060606,5150,491,5654,0.0868411743898125,2,15,15,"Artifact (4)"]
["UPN_Te4_010",4,55593628,"G","C","KIT","ENST00000288135","missense_variant","gGa/gCa|p.Gly565Ala/c.1694G>C",40081,1257,41457,0.0303205731239598,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.205,"Deleterious",33.62,31.32,26875,14,26969,0.000519114538915051,13206,1243,14488,0.0857951408061844,2,15,15,"Artifact (4)"]
["UPN_Te4_011",4,55593628,"G","C","KIT","ENST00000288135","missense_variant","gGa/gCa|p.Gly565Ala/c.1694G>C",42058,654,42899,0.0152451106086389,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.205,"Deleterious",33.09,30.41,27183,44,27354,0.00160853988447759,14875,610,15545,0.0392409134770023,2,15,15,"Artifact (6)"]
["UPN_Te4_013",4,55593628,"G","C","KIT","ENST00000288135","missense_variant","gGa/gCa|p.Gly565Ala/c.1694G>C",20447,253,20780,0.0121751684311838,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.205,"Deleterious",33.08,30.29,12827,18,12889,0.00139653968500272,7620,235,7891,0.0297807628944367,2,15,15,"Artifact (6)"]
["UPN_Te4_014",4,55593628,"G","C","KIT","ENST00000288135","missense_variant","gGa/gCa|p.Gly565Ala/c.1694G>C",45390,605,46209,0.0130926875716852,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.205,"Deleterious",33.07,30.45,29015,35,29201,0.00119858908941475,16375,570,17008,0.033513640639699,2,15,15,"Artifact (6)"]
["UPN_Te4_015",4,55593628,"G","C","KIT","ENST00000288135","missense_variant","gGa/gCa|p.Gly565Ala/c.1694G>C",28669,307,29091,0.0105530920215874,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.205,"Deleterious",33.08,29.86,19198,32,19316,0.00165665769310416,9471,275,9775,0.0281329923273657,2,15,15,"Artifact (6)"]
["UPN_Te4_016",4,55593628,"G","C","KIT","ENST00000288135","missense_variant","gGa/gCa|p.Gly565Ala/c.1694G>C",34513,372,35023,0.0106215915255689,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.205,"Deleterious",33.07,29.73,22218,34,22349,0.00152132086446821,12295,338,12674,0.0266687707116932,2,15,15,"Artifact (6)"]
["UPN_Te4_018",4,55593628,"G","C","KIT","ENST00000288135","missense_variant","gGa/gCa|p.Gly565Ala/c.1694G>C",41331,518,42000,0.0123333333333333,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.205,"Deleterious",33.12,30.07,26770,47,26925,0.0017455896007428,14561,471,15075,0.0312437810945274,2,15,15,"Artifact (6)"]
["UPN_Te4_003",4,55599262,"A","T","KIT","ENST00000288135","missense_variant","agA/agT|p.Arg796Ser/c.2388A>T",2816,29,2859,0.0101434067855894,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.17,"Deleterious",35.42,34.97,2816,29,2859,0.0101434067855894,0,0,0,"NA",1,1,1,"Artifact (0)"]
["UPN_Te4_001",4,106155331,"T","C","TET2","ENST00000380013","missense_variant","Ttt/Ctt|p.Phe78Leu/c.232T>C",8824,94,8964,0.0104863900044623,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.32,"Tolerated",33.38,32.91,4438,48,4513,0.0106359406159982,4386,46,4451,0.010334756234554,0.917630628004319,4,4,"Artifact (4)"]
["UPN_Te4_018",4,106155377,"G","A","TET2","ENST00000380013","missense_variant","gGa/gAa|p.Gly93Glu/c.278G>A",4707,49,4797,0.0102147175317907,0,0,0,0,1,0,0,1,2,"NO","NO","COSM5479691, COSM5479692","Something is odd...",0,"NO","NO","NO","NO","NO","NO",-2.094,"Tolerated",31.73,32.24,33,45,80,0.5625,4674,4,4717,0.000847996608013568,1.10728651881531E-082,5,5,"Artifact (5)"]
["UPN_Te4_009",4,106155682,"A","G","TET2","ENST00000380013","missense_variant","Aag/Gag|p.Lys195Glu/c.583A>G",21495,2120,23709,0.0894175207727023,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO",1.647E-005,"NO","NO",-0.748,"Tolerated",33.88,31.57,7212,2062,9298,0.221768122176812,14283,58,14411,0.00402470335160641,0,29,29,"Artifact (5)"]
["UPN_Te4_018",4,106155682,"A","G","TET2","ENST00000380013","missense_variant","Aag/Gag|p.Lys195Glu/c.583A>G",50705,2524,53554,0.0471299996265452,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO",1.647E-005,"NO","NO",-0.748,"Tolerated",33.26,31.65,22390,2403,24838,0.0967469200418713,28315,121,28716,0.00421367878534615,0,29,29,"Artifact (5)"]
["UPN_Te4_005",4,106156012,"A","G","TET2","ENST00000380013","missense_variant","Agt/Ggt|p.Ser305Gly/c.913A>G",48291,4746,53194,0.0892205887882092,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.004,"Tolerated",33.86,31.65,20107,4667,24824,0.188003544956494,28184,79,28370,0.00278463165315474,0,26,26,"Artifact (7)"]
["UPN_Te4_010",4,106156012,"A","G","TET2","ENST00000380013","missense_variant","Agt/Ggt|p.Ser305Gly/c.913A>G",59630,6482,66280,0.097797223898612,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.004,"Tolerated",33.81,31.6,26000,6345,32394,0.195869605482497,33630,137,33886,0.0040429675972378,0,26,26,"Artifact (7)"]
["UPN_Te4_001",4,106156273,"T","C","TET2","ENST00000380013","missense_variant","Ttt/Ctt|p.Phe392Leu/c.1174T>C",28681,293,29112,0.0100645781808189,0,0,0,1,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.881,"Tolerated",31.98,31.7,14511,145,14708,0.00985858036442752,14170,148,14404,0.0102749236323244,0.724801046887341,2,2,"Artifact (4)"]
["UPN_Te4_019",4,106156273,"T","C","TET2","ENST00000380013","missense_variant","Ttt/Ctt|p.Phe392Leu/c.1174T>C",12452,129,12633,0.0102113512229874,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.881,"Tolerated",32.44,31.97,6273,60,6361,0.00943247916994183,6179,69,6272,0.0110012755102041,0.425868751076509,2,2,"Artifact (1)"]
["UPN_Te4_010",4,106156288,"ACAC","A","TET2","ENST00000380013","inframe_deletion","cca/|p.Pro401del/c.1201_1203delCCA",35762,447,36299,0.0123143888,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.078,"Tolerated",34.41,"NA",18031,226,18301,0.012349052,17731,221,17998,0.0122791421,0.9620717728,18,18,"Artifact (17)"]
["UPN_Te4_022",4,106156288,"ACAC","A","TET2","ENST00000380013","inframe_deletion","cca/|p.Pro401del/c.1201_1203delCCA",20816,222,21111,0.0105158448,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.078,"Tolerated",34.09,"NA",10469,113,10612,0.0106483227,10347,109,10499,0.0103819411,0.8927193561,18,18,"Artifact (17)"]
["UPN_Te4_009",4,106156348,"C","G","TET2","ENST00000380013","missense_variant","Cag/Gag|p.Gln417Glu/c.1249C>G",13472,458,13951,0.0328291878718371,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.33,"Tolerated",33.31,31.08,6924,453,7392,0.0612824675324675,6548,5,6559,0.000762311327946333,5.82066349200383E-119,15,15,"Artifact (9)"]
["UPN_Te4_016",4,106156348,"C","G","TET2","ENST00000380013","missense_variant","Cag/Gag|p.Gln417Glu/c.1249C>G",27195,312,27582,0.0113117250380683,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.33,"Tolerated",32.86,30.69,15415,298,15734,0.0189398754290072,11780,14,11848,0.00118163403106009,7.3367397456485E-055,15,15,"Artifact (10)"]
["UPN_Te4_009",4,106156710,"G","C","TET2","ENST00000380013","missense_variant","gaG/gaC|p.Glu537Asp/c.1611G>C",12750,315,13085,0.0240733664501337,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.518,"Tolerated",32.57,31.52,3056,0,3065,0,9694,315,10020,0.031437125748503,2,10,10,"Artifact (4)"]
["UPN_Te4_008",4,106156935,"TG","T","TET2","ENST00000380013","frameshift_variant","ggg/|p.Leu615fs/c.1842delG",75657,935,76875,0.0121626016260163,1,0,0,0,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO",8.237E-006,"NO","NO","NA","NA",32.63,"NA",38029,437,38626,0.0113136229482732,37628,498,38249,0.0130199482339408,0.0324625450588144,21,21,"Artifact (7)"]
["UPN_Te4_017",4,106156935,"TG","T","TET2","ENST00000380013","frameshift_variant","ggg/|p.Leu615fs/c.1842delG",29089,324,29532,0.0109711499390492,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",8.237E-006,"NO","NO","NA","NA",31.16,"NA",14577,160,14801,0.010810080399973,14512,164,14731,0.0111329848618559,0.823250498186616,21,21,"Artifact (7)"]
["UPN_Te4_021",4,106156935,"TG","T","TET2","ENST00000380013","frameshift_variant","ggg/|p.Leu615fs/c.1842delG",46385,554,47130,0.0117547209845109,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",8.237E-006,"NO","NO","NA","NA",31.15,"NA",23234,269,23611,0.0113929947905637,23151,285,23519,0.0121178621540031,0.494137966979252,21,21,"Artifact (7)"]
["UPN_Te4_002",4,106157021,"G","C","TET2","ENST00000380013","missense_variant","gGg/gCg|p.Gly641Ala/c.1922G>C",60524,1795,62478,0.0287301129997759,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.7,"Tolerated",33.41,31.11,34055,47,34200,0.00137426900584795,26469,1748,28278,0.0618148383902681,2,15,15,"Artifact (6)"]
["UPN_Te4_011",4,106157021,"G","C","TET2","ENST00000380013","missense_variant","gGg/gCg|p.Gly641Ala/c.1922G>C",70851,1147,72209,0.0158844465371353,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.7,"Tolerated",33.11,30.13,40920,83,41152,0.00201691290824261,29931,1064,31057,0.0342595872106127,2,15,15,"Artifact (8)"]
["UPN_Te4_003",4,106157294,"C","G","TET2","ENST00000380013","missense_variant","cCa/cGa|p.Pro732Arg/c.2195C>G",22863,963,23895,0.04030131826742,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.13,"Tolerated",32.88,31.51,15448,958,16447,0.0582477047485864,7415,5,7448,0.000671321160042965,3.16726638917854E-149,16,16,"Artifact (8)"]
["UPN_Te4_013",4,106157294,"C","G","TET2","ENST00000380013","missense_variant","cCa/cGa|p.Pro732Arg/c.2195C>G",18783,284,19125,0.0148496732026144,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.13,"Tolerated",32.55,30.86,13370,274,13684,0.0200233849751535,5413,10,5441,0.00183789744532255,3.50445477444469E-028,16,16,"Artifact (9)"]
["UPN_Te4_007",4,106157944,"C","G","TET2","ENST00000380013","missense_variant","Cat/Gat|p.His949Asp/c.2845C>G",33868,1420,35414,0.0400971367255887,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.018,"Tolerated",32.79,31.53,23436,1413,24959,0.0566128450659081,10432,7,10455,0.000669536107125777,2.75210793428693E-206,15,15,"Artifact (8)"]
["UPN_Te4_015",4,106157944,"C","G","TET2","ENST00000380013","missense_variant","Cat/Gat|p.His949Asp/c.2845C>G",19825,385,20277,0.018987029639493,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.018,"Tolerated",32.19,31.44,16575,382,17010,0.0224573780129336,3250,3,3267,0.000918273645546373,3.04422578835826E-025,15,15,"Artifact (9)"]
["UPN_Te4_009",4,106157997,"G","C","TET2","ENST00000380013","missense_variant","caG/caC|p.Gln966His/c.2898G>C",11585,119,11735,0.0101406050276949,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.417,"Tolerated",34.18,30.97,8853,5,8879,0.000563126478207005,2732,114,2856,0.0399159663865546,2,8,8,"Artifact (6)"]
["UPN_Te4_010",4,106157997,"G","C","TET2","ENST00000380013","missense_variant","caG/caC|p.Gln966His/c.2898G>C",36105,586,36751,0.0159451443498136,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.417,"Tolerated",33.87,30.89,23743,24,23800,0.00100840336134454,12362,562,12951,0.0433943324839781,2,8,8,"Artifact (5)"]
["UPN_Te4_009",4,106158139,"G","T","TET2","ENST00000380013","missense_variant","Gca/Tca|p.Ala1014Ser/c.3040G>T",18885,652,19574,0.0333094921835087,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","rs145019756","NO","NO","NO","NO",0.463,"Tolerated",35.38,35.27,9890,648,10566,0.0613287904599659,8995,4,9008,0.00044404973357016,2,22,22,"Artifact (4)"]
["UPN_Te4_020",4,106158139,"G","T","TET2","ENST00000380013","missense_variant","Gca/Tca|p.Ala1014Ser/c.3040G>T",33355,1159,34570,0.0335261787677177,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","rs145019756","NO","NO","NO","NO",0.463,"Tolerated",35.54,35.52,14678,1146,15856,0.0722754793138244,18677,13,18714,0.000694667094154109,2,22,22,"Artifact (4)"]
["UPN_Te4_007",4,106158342,"A","C","TET2","ENST00000380013","missense_variant","ttA/ttC|p.Leu1081Phe/c.3243A>C",41834,684,42780,0.0159887798036466,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.845,"Tolerated",32.93,31.46,14831,8,14878,0.000537706681005512,27003,676,27902,0.0242276539316178,2,8,8,"Artifact (5)"]
["UPN_Te4_017",4,106158368,"A","G","TET2","ENST00000380013","missense_variant","aAg/aGg|p.Lys1090Arg/c.3269A>G",8561,87,8652,0.0100554785020804,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO",8.237E-006,"NO","NO",-0.959,"Tolerated",35.38,34.89,8561,87,8652,0.0100554785020804,0,0,0,"NA",1,9,9,"Artifact (3)"]
["UPN_Te4_008",4,106158446,"TA","T","TET2","ENST00000380013","frameshift_variant","aat/|p.Asn1118fs/c.3353delA",20676,219,20938,0.0104594517145859,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.31,"NA",33,0,33,0,20643,219,20905,0.0104759626883521,1,15,15,"Artifact (10)"]
["UPN_Te4_022",4,106158446,"TA","T","TET2","ENST00000380013","frameshift_variant","aat/|p.Asn1118fs/c.3353delA",9448,96,9559,0.0100428915158489,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.68,"NA",2,0,2,0,9446,96,9557,0.0100449931987025,1,15,15,"Artifact (9)"]
["UPN_Te4_016",4,106190867,"A","T","TET2","ENST00000380013","missense_variant","cAc/cTc|p.His1382Leu/c.4145A>T",12343,135,12516,0.0107861936720997,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-10.537,"Deleterious",32.61,26.11,6255,44,6317,0.00696533164476809,6088,91,6199,0.0146797870624294,2.82087787486941E-005,1,1,"Artifact (2)"]
["UPN_Te4_009",4,106196301,"A","C","TET2","ENST00000380013","missense_variant","cAg/cCg|p.Gln1545Pro/c.4634A>C",5752,75,5877,0.0127616130678918,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.804,"Tolerated",30.1,26.57,2435,28,2475,0.0113131313131313,3317,47,3402,0.0138154027042916,2,18,18,"Artifact (8)"]
["UPN_Te4_002",4,106196515,"C","G","TET2","ENST00000380013","missense_variant","aaC/aaG|p.Asn1616Lys/c.4848C>G",38618,1168,39892,0.0292790534442996,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.628,"Tolerated",32.7,31.23,26863,1157,28096,0.0411802391799544,11755,11,11796,0.000932519498134961,1.71861754963347E-159,15,15,"Artifact (6)"]
["UPN_Te4_011",4,106196515,"C","G","TET2","ENST00000380013","missense_variant","aaC/aaG|p.Asn1616Lys/c.4848C>G",46990,713,47887,0.0148892183682419,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.628,"Tolerated",31.69,30.47,32058,675,32861,0.0205410669182313,14932,38,15026,0.00252894982031146,2.20807493244174E-067,15,15,"Artifact (8)"]
["UPN_Te4_006",4,106196967,"G","A","TET2","ENST00000380013","missense_variant","aGt/aAt|p.Ser1767Asn/c.5300G>A",37014,721,37760,0.0190942796610169,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","rs185223849","NO",3.931E-005,"NO","NO",-0.699,"Tolerated",35.29,35.73,15509,687,16206,0.0423917067752684,21505,34,21554,0.00157743342303053,2,19,19,"Artifact (6)"]
["UPN_Te4_019",4,106196967,"G","A","TET2","ENST00000380013","missense_variant","aGt/aAt|p.Ser1767Asn/c.5300G>A",17721,1181,18909,0.0624570310434185,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","rs185223849","NO",3.931E-005,"NO","NO",-0.699,"Tolerated",35.42,35.91,6766,1166,7936,0.146925403225806,10955,15,10973,0.00136699170691698,2,19,19,"Artifact (4)"]
["UPN_Te4_007",4,106197000,"A","G","TET2","ENST00000380013","missense_variant","cAt/cGt|p.His1778Arg/c.5333A>G",36997,1382,38434,0.0359577457,0,0,0,0,1,1,0,0,2,3.017,"NO","NO","NO","O","rs62621450","rs62621450","NO",0.045,"NO","YES",-1.986,"Tolerated",35.33,35.53,15573,55,15641,0.0035163992,21424,1327,22793,0.0582196288,2,27,27,"Artifact (10)"]
["UPN_Te4_016",4,106197000,"A","G","TET2","ENST00000380013","missense_variant","cAt/cGt|p.His1778Arg/c.5333A>G",34178,1514,35799,0.0422916841,0,0,0,0,1,1,0,0,2,3.017,"NO","NO","NO","O","rs62621450","rs62621450","NO",0.045,"NO","YES",-1.986,"Tolerated",35.31,35.46,16100,79,16241,0.0048642325,18078,1435,19558,0.0733715104,2,27,27,"Artifact (10)"]
["UPN_Te4_016",4,106197147,"A","G","TET2","ENST00000380013","missense_variant","aAg/aGg|p.Lys1827Arg/c.5480A>G",20496,237,20807,0.0113903974623925,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.511,"Tolerated",34.32,34.9,4708,38,4757,0.00798822787471095,15788,199,16050,0.012398753894081,2,6,6,"Artifact (1)"]
["UPN_Te4_015",4,106197167,"C","A","TET2","ENST00000380013","missense_variant","Cag/Aag|p.Gln1834Lys/c.5500C>A",3986,43,4043,0.0106356665842196,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.944,"Tolerated",31.66,25.3,3986,43,4043,0.0106356665842196,0,0,0,"NA",1,1,1,"Artifact (5)"]
["UPN_Te4_005",4,106197443,"C","G","TET2","ENST00000380013","missense_variant","Cgt/Ggt|p.Arg1926Gly/c.5776C>G",37586,707,38438,0.0183932566730839,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.287,"Deleterious",34.2,31.24,7487,696,8212,0.0847540185094983,30099,11,30226,0.000363925097598094,0,12,12,"Artifact (8)"]
["UPN_Te4_009",4,106197468,"A","G","TET2","ENST00000380013","missense_variant","aAg/aGg|p.Lys1934Arg/c.5801A>G",15766,192,15983,0.0120127635612839,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.136,"Tolerated",35.27,34.49,4178,81,4263,0.0190007037297678,11588,111,11720,0.00947098976109215,2,20,20,"Artifact (5)"]
["UPN_Te4_001",4,106197497,"T","C","TET2","ENST00000380013","missense_variant","Tcc/Ccc|p.Ser1944Pro/c.5830T>C",31830,1618,33588,0.048171966178397,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.799,"Tolerated",32.56,31.53,9679,30,9812,0.00305748063595597,22151,1588,23776,0.0667900403768506,2,22,22,"Artifact (5)"]
["UPN_Te4_010",4,106197497,"T","C","TET2","ENST00000380013","missense_variant","Tcc/Ccc|p.Ser1944Pro/c.5830T>C",34273,5813,40210,0.144566028351156,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.799,"Tolerated",32.68,31.64,10202,24,10295,0.00233122875182127,24071,5789,29915,0.193514959050644,2,22,22,"Artifact (4)"]
["UPN_Te4_019",4,106197497,"T","C","TET2","ENST00000380013","missense_variant","Tcc/Ccc|p.Ser1944Pro/c.5830T>C",12249,264,12528,0.0210727969348659,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.799,"Tolerated",32.63,31.73,3130,5,3141,0.00159184972938555,9119,259,9387,0.0275913497390007,2,22,22,"Artifact (5)"]
["UPN_Te4_007",4,153245498,"C","G","FBXW7","ENST00000281708","missense_variant","Gtt/Ctt|p.Val565Leu/c.1693G>C",32270,1285,33651,0.038186086594752,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.998,"Deleterious",33.1,31.43,17665,1272,18998,0.0669544162543426,14605,13,14653,0.000887190336449874,6.83068028523144E-299,15,15,"Artifact (6)"]
["UPN_Te4_008",4,153249447,"T","C","FBXW7","ENST00000281708","missense_variant","aAa/aGa|p.Lys444Arg/c.1331A>G",8566,104,8703,0.011949902332529,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.348,"Tolerated",34.38,34.95,4300,52,4380,0.0118721461187215,4266,52,4323,0.012028683784409,1,1,1,"Artifact (1)"]
["UPN_Te4_002",4,153249508,"C","G","FBXW7","ENST00000281708","missense_variant","Gta/Cta|p.Val424Leu/c.1270G>C",16112,317,16457,0.0192623199854165,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.93,"Deleterious",33.43,31.36,8861,311,9191,0.0338374496790338,7251,6,7266,0.000825763831544178,4.06593602480168E-070,9,9,"Artifact (6)"]
["UPN_Te4_006",5,170837540,"G","T","NPM1","ENST00000517671","missense_variant","Gat/Tat|p.Asp286Tyr/c.856G>T",11023,170,11267,0.0150883109967161,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.653,"Deleterious",22.92,16.19,11023,170,11267,0.0150883109967161,0,0,0,"NA",1,5,5,"Artifact (5)"]
["UPN_Te4_013",5,170837544,"T","A","NPM1","ENST00000517671","missense_variant","cTc/cAc|p.Leu287His/c.860T>A",4650,91,4818,0.0188875051888751,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.304,"Deleterious",23.66,18.62,4650,91,4818,0.0188875051888751,0,0,0,"NA",1,1,2,"Artifact (3)"]
["UPN_Te4_015",5,170837555,"A","G","NPM1","ENST00000517671","missense_variant","Agg/Ggg|p.Arg291Gly/c.871A>G",3899,57,4084,0.0139569049951028,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.622,"Deleterious",22.59,19.33,3899,57,4084,0.0139569049951028,0,0,0,"NA",1,15,17,"Artifact (9)"]
["UPN_Te4_001",7,50444453,"G","C","IKZF1","ENST00000331340","missense_variant","gGg/gCg|p.Gly128Ala/c.383G>C",24087,434,24600,0.0176422764227642,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.689,"Deleterious",32.32,30.74,6995,11,7038,0.00156294401818699,17092,423,17562,0.024086094977793,2,16,16,"Artifact (7)"]
["UPN_Te4_010",7,50444453,"G","C","IKZF1","ENST00000331340","missense_variant","gGg/gCg|p.Gly128Ala/c.383G>C",21861,1548,23497,0.0658807507341363,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.689,"Deleterious",32.55,31.37,6599,9,6621,0.00135931128228364,15262,1539,16876,0.0911945958757999,2,16,16,"Artifact (6)"]
["UPN_Te4_008",7,50455138,"A","G","IKZF1","ENST00000331340","missense_variant","Agc/Ggc|p.Ser229Gly/c.685A>G",7073,92,7192,0.0127919911012236,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.663,"Tolerated",33.32,34.32,3586,47,3634,0.0129334067143643,3487,45,3558,0.0126475548060708,1,3,3,"Artifact (0)"]
["UPN_Te4_004",7,50467865,"A","C","IKZF1","ENST00000331340","missense_variant","gAc/gCc|p.Asp367Ala/c.1100A>C",4261,53,4337,0.012220428867881,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-4.057,"Deleterious",32.58,31.45,1615,1,1626,0.000615006150061501,2646,52,2711,0.0191811139800812,2,4,4,"Artifact (4)"]
["UPN_Te4_008",7,50467865,"A","C","IKZF1","ENST00000331340","missense_variant","gAc/gCc|p.Asp367Ala/c.1100A>C",6677,68,6780,0.0100294985250737,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-4.057,"Deleterious",32.68,31.74,2606,2,2616,0.000764525993883792,4071,66,4164,0.015850144092219,2,4,4,"Artifact (4)"]
["UPN_Te4_008",7,50467955,"C","G","IKZF1","ENST00000331340","missense_variant","tCc/tGc|p.Ser397Cys/c.1190C>G",5160,57,5241,0.0108757870635375,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-4.831,"Deleterious",34.38,30.98,2563,28,2607,0.0107403145377829,2597,29,2634,0.0110098709187547,1,1,1,"Artifact (0)"]
["UPN_Te4_013",7,101740740,"T","A","CUX1","ENST00000292535","missense_variant","cTg/cAg|p.Leu122Gln/c.365T>A",2196,23,2227,0.0103277952402335,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.65,"Deleterious",31.35,25.65,1128,7,1139,0.00614574187884109,1068,16,1088,0.0147058823529412,0.0581041308326756,1,1,"Artifact (4)"]
["UPN_Te4_013",7,101821756,"C","T","CUX1","ENST00000292535","missense_variant","gCc/gTc|p.Ala279Val/c.836C>T",1304,20,1328,0.0150602409638554,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.702,"Tolerated",35.46,36,1304,20,1328,0.0150602409638554,0,0,0,"NA",1,1,1,"Artifact (2)"]
["UPN_Te4_012",7,101821919,"CA","C","CUX1","ENST00000292535","frameshift_variant","aac/|p.Asn335fs/c.1004delA",8528,109,8690,0.0125431530494822,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO",9.893E-005,"NO","NO","NA","NA",35.5,"NA",6087,103,6214,0.0165754747344706,2441,6,2476,0.0024232633279483,2,13,13,"Artifact (7)"]
["UPN_Te4_002",7,101839973,"GC","G","CUX1","ENST00000292535","frameshift_variant","cct/|p.Pro430fs/c.1289delC",3165,55,3223,0.0170648464163823,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",33.34,"NA",3164,55,3222,0.0170701427684668,1,0,1,0,1,18,22,"Artifact (10)"]
["UPN_Te4_011",7,101839973,"GC","G","CUX1","ENST00000292535","frameshift_variant","cct/|p.Pro430fs/c.1289delC",3151,61,3221,0.0189382179447377,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",32.44,"NA",3151,61,3221,0.0189382179447377,0,0,0,"NA",1,18,22,"Artifact (10)"]
["UPN_Te4_005",7,101840076,"G","C","CUX1","ENST00000292535","missense_variant","aGc/aCc|p.Ser462Thr/c.1385G>C",3332,43,3391,0.0126806251843114,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.358,"Tolerated",35.18,32,1,43,44,0.977272727272727,3331,0,3347,0,6.69137961212214E-098,2,2,"Artifact (6)"]
["UPN_Te4_002",7,101840077,"C","G","CUX1","ENST00000292535","missense_variant","agC/agG|p.Ser462Arg/c.1386C>G",15012,437,15486,0.0282190365491412,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.036,"Tolerated",32.46,31.54,11833,436,12301,0.0354442728233477,3179,1,3185,0.000313971742543171,5.90537122776972E-043,15,15,"Artifact (9)"]
["UPN_Te4_011",7,101840077,"C","G","CUX1","ENST00000292535","missense_variant","agC/agG|p.Ser462Arg/c.1386C>G",22582,381,23020,0.0165508253692441,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.036,"Tolerated",32.06,30.9,19418,375,19841,0.0189002570434958,3164,6,3179,0.00188738597043095,2.14301901672712E-017,15,15,"Artifact (10)"]
["UPN_Te4_008",7,101840477,"T","G","CUX1","ENST00000292535","missense_variant","Tgg/Ggg|p.Trp596Gly/c.1786T>G",35039,358,35759,0.0100114656450124,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-8.62,"Deleterious",32.74,31.22,22244,350,22878,0.015298540082175,12795,8,12881,0.000621069792717957,5.96105742706808E-057,5,5,"Artifact (5)"]
["UPN_Te4_014",7,101844916,"AC","A","CUX1","ENST00000292535","frameshift_variant","ccg/|p.Pro782fs/c.2345delC",16481,187,16717,0.0111862176227792,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.46,"NA",8195,93,8315,0.0111846061334937,8286,94,8402,0.0111878124256129,1,5,5,"Artifact (6)"]
["UPN_Te4_010",7,101845269,"A","C","CUX1","ENST00000292535","missense_variant","Acc/Ccc|p.Thr898Pro/c.2692A>C",10972,191,11242,0.0169898594556129,0,0,0,1,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.123,"Tolerated",31.31,30.79,1107,11,1120,0.00982142857142857,9865,180,10122,0.01778304682869,2,10,10,"Artifact (5)"]
["UPN_Te4_016",7,101845327,"T","A","CUX1","ENST00000292535","missense_variant","gTg/gAg|p.Val917Glu/c.2750T>A",739,21,828,0.0253623188405797,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.611,"Tolerated",21.29,15.86,739,21,828,0.0253623188405797,0,0,0,"NA",1,1,2,"Artifact (2)"]
["UPN_Te4_009",7,101845333,"T","A","CUX1","ENST00000292535","missense_variant","aTg/aAg|p.Met919Lys/c.2756T>A",419,39,470,0.0829787234042553,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.594,"Tolerated",20.25,15.13,419,39,470,0.0829787234042553,0,0,0,"NA",1,7,9,"Artifact (4)"]
["UPN_Te4_007",7,101845338,"A","G","CUX1","ENST00000292535","missense_variant","Aag/Gag|p.Lys921Glu/c.2761A>G",2103,35,2238,0.015638963360143,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.272,"Tolerated",22.17,24.2,1003,16,1107,0.014453477868112,1100,19,1131,0.0167992926613616,0.865722321811132,1,3,"Artifact (5)"]
["UPN_Te4_012",7,101845441,"A","G","CUX1","ENST00000292535","missense_variant","aAg/aGg|p.Lys955Arg/c.2864A>G",7797,86,7899,0.010887454108115,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.413,"Tolerated",35.53,35.34,7432,84,7531,0.0111538972248041,365,2,368,0.00543478260869565,2,19,19,"Artifact (6)"]
["UPN_Te4_015",7,101845441,"A","G","CUX1","ENST00000292535","missense_variant","aAg/aGg|p.Lys955Arg/c.2864A>G",13363,206,13591,0.0151570892502391,0,0,0,1,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.413,"Tolerated",35.04,34.88,12502,196,12720,0.0154088050314465,861,10,871,0.0114810562571757,2,19,19,"Artifact (8)"]
["UPN_Te4_004",7,101870824,"C","G","CUX1","ENST00000292535","missense_variant","aCa/aGa|p.Thr1103Arg/c.3308C>G",13573,485,14103,0.0343898461320286,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.048,"Tolerated",33.45,31.17,5486,478,5986,0.079852990310725,8087,7,8117,0.000862387581618825,3.46012515602623E-170,14,14,"Artifact (8)"]
["UPN_Te4_015",7,101870824,"C","G","CUX1","ENST00000292535","missense_variant","aCa/aGa|p.Thr1103Arg/c.3308C>G",18974,306,19338,0.015823766677009,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.048,"Tolerated",32.88,30.01,9100,284,9416,0.030161427357689,9874,22,9922,0.00221729490022173,2.37617836477641E-063,14,14,"Artifact (10)"]
["UPN_Te4_007",7,101877475,"A","G","CUX1","ENST00000292535","missense_variant","Aac/Gac|p.Asn1193Asp/c.3577A>G",32672,3723,36520,0.101944140197152,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.261,"Tolerated",33.61,31.49,13967,3670,17657,0.20784957807102,18705,53,18863,0.00280973334040184,0,22,22,"Artifact (6)"]
["UPN_Te4_014",7,101877475,"A","G","CUX1","ENST00000292535","missense_variant","Aac/Gac|p.Asn1193Asp/c.3577A>G",38960,1953,41072,0.0475506427736658,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.261,"Tolerated",33.24,31.34,18241,1881,20160,0.0933035714285714,20719,72,20912,0.00344299923488906,0,22,22,"Artifact (7)"]
["UPN_Te4_004",7,101882755,"A","G","CUX1","ENST00000292535","missense_variant","Aaa/Gaa|p.Lys1260Glu/c.3778A>G",22210,2908,25179,0.11549306962151,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.997,"Tolerated",33.66,31.29,10322,2881,13233,0.21771329252626,11888,27,11946,0.00226017076845806,0,23,23,"Artifact (5)"]
["UPN_Te4_013",7,101882755,"A","G","CUX1","ENST00000292535","missense_variant","Aaa/Gaa|p.Lys1260Glu/c.3778A>G",8059,474,8562,0.0553608969866854,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.997,"Tolerated",33.09,30.94,4556,465,5033,0.09239022451818,3503,9,3529,0.00255029753471238,1.48768985757093E-096,23,23,"Artifact (7)"]
["UPN_Te4_014",7,101882755,"A","G","CUX1","ENST00000292535","missense_variant","Aaa/Gaa|p.Lys1260Glu/c.3778A>G",34839,1943,36925,0.0526201760324983,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.997,"Tolerated",33.15,31.3,19041,1910,21004,0.0909350599885736,15798,33,15921,0.00207273412474091,0,23,23,"Artifact (6)"]
["UPN_Te4_001",7,101882807,"T","C","CUX1","ENST00000292535","missense_variant","cTc/cCc|p.Leu1277Pro/c.3830T>C",28614,983,29797,0.0329898983119106,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.595,"Deleterious",33.39,31.67,16637,68,16852,0.00403512936150012,11977,915,12945,0.0706836616454229,2,23,23,"Artifact (4)"]
["UPN_Te4_012",7,101882807,"T","C","CUX1","ENST00000292535","missense_variant","cTc/cCc|p.Leu1277Pro/c.3830T>C",12683,298,13009,0.0229072180797909,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.595,"Deleterious",33.78,31.7,7556,11,7586,0.00145003954653309,5127,287,5423,0.0529227364927162,2,23,23,"Artifact (4)"]
["UPN_Te4_020",7,101882807,"T","C","CUX1","ENST00000292535","missense_variant","cTc/cCc|p.Leu1277Pro/c.3830T>C",15379,404,15823,0.0255324527586425,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.595,"Deleterious",33.69,31.91,8719,11,8751,0.00125699920009142,6660,393,7072,0.0555712669683258,2,23,23,"Artifact (4)"]
["UPN_Te4_010",7,101891898,"A","C","CUX1","ENST00000292535","missense_variant","gAg/gCg|p.Glu1365Ala/c.4094A>C",8659,104,8809,0.0118061073901691,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.825,"Tolerated",32.19,31.03,1483,0,1488,0,7176,104,7321,0.0142057096025133,2,6,6,"Artifact (6)"]
["UPN_Te4_004",7,101891991,"T","A","CUX1","ENST00000292535","missense_variant","gTg/gAg|p.Val1396Glu/c.4187T>A",1446,20,1490,0.0134228187919463,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.977,"Tolerated",18.9,15.1,680,18,716,0.0251396648044693,766,2,774,0.00258397932816537,0.000124767295488006,7,8,"Artifact (8)"]
["UPN_Te4_010",7,101892050,"GC","G","CUX1","ENST00000292535","frameshift_variant","ccc/|p.Glu1418fs/c.4251delC",1476,24,1503,0.0159680638722555,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.79,"NA",0,0,0,"NA",1476,24,1503,0.0159680638722555,2,2,2,"Artifact (3)"]
["UPN_Te4_002",7,101892209,"C","G","CUX1","ENST00000292535","missense_variant","Cgg/Ggg|p.Arg1469Gly/c.4405C>G",950,133,1084,0.122693726937269,0,1,0,1,1,0,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.912,"Tolerated",31.99,31.78,932,133,1066,0.124765478424015,18,0,18,0,0.151793361503291,19,19,"Artifact (6)"]
["UPN_Te4_011",7,101892209,"C","G","CUX1","ENST00000292535","missense_variant","Cgg/Ggg|p.Arg1469Gly/c.4405C>G",1614,145,1764,0.0821995464852608,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.912,"Tolerated",32.1,31.69,1502,145,1651,0.0878255602665051,112,0,113,0,0.00010514300549194,19,19,"Artifact (7)"]
["UPN_Te4_002",7,101892214,"CT","C","CUX1","ENST00000292535","frameshift_variant","tcg/|p.Ser1471fs/c.4411delT",1068,26,1098,0.0236794171220401,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.67,"NA",1049,26,1079,0.0240963855421687,19,0,19,0,2,2,2,"Artifact (2)"]
["UPN_Te4_004",7,148504760,"T","A","EZH2","ENST00000320356","missense_variant","gAa/gTa|p.Glu745Val/c.2234A>T",7455,118,7589,0.0155488206614837,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.44,"Deleterious",21.29,15.92,7455,118,7589,0.0155488206614837,0,0,0,"NA",1,15,15,"Artifact (8)"]
["UPN_Te4_014",7,148504760,"T","A","EZH2","ENST00000320356","missense_variant","gAa/gTa|p.Glu745Val/c.2234A>T",7898,212,8135,0.026060233558697,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.44,"Deleterious",20.23,17.17,7898,212,8135,0.026060233558697,0,0,0,"NA",1,15,15,"Artifact (6)"]
["UPN_Te4_014",7,148504787,"G","T","EZH2","ENST00000320356","missense_variant","gCt/gAt|p.Ala736Asp/c.2207C>A",7938,82,8083,0.0101447482370407,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.901,"Tolerated",19.67,15.2,7938,82,8083,0.0101447482370407,0,0,0,"NA",1,1,1,"Artifact (4)"]
["UPN_Te4_011",7,148504792,"G","T","EZH2","ENST00000320356","missense_variant","agC/agA|p.Ser734Arg/c.2202C>A",14805,176,15175,0.0115980230642504,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.526,"Deleterious",17.39,15.1,14803,176,15173,0.0115995518354973,2,0,2,0,1,2,2,"Artifact (4)"]
["UPN_Te4_018",7,148512029,"T","C","EZH2","ENST00000320356","missense_variant","aAg/aGg|p.Lys550Arg/c.1649A>G",21232,216,21514,0.0100399739704379,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.519,"Deleterious",35.3,35.18,21232,216,21514,0.0100399739704379,0,0,0,"NA",1,2,2,"Artifact (3)"]
["UPN_Te4_015",7,148523602,"A","G","EZH2","ENST00000320356","missense_variant","cTt/cCt|p.Leu284Pro/c.851T>C",29377,313,29909,0.0104650774014511,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.802,"Deleterious",32.04,32.66,14968,161,15166,0.0106158512462086,14409,152,14743,0.010309977616496,0.909524147611938,5,5,"Artifact (1)"]
["UPN_Te4_017",7,148523602,"A","G","EZH2","ENST00000320356","missense_variant","cTt/cCt|p.Leu284Pro/c.851T>C",23511,267,23856,0.011192152917505,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.802,"Deleterious",32.92,31.54,11880,135,12026,0.0112256776983203,11631,132,11830,0.0111580726965342,1,5,5,"Artifact (1)"]
["UPN_Te4_008",7,148526848,"ATTTTTTA","TAGGGGTGGAGAACTCCTAC","EZH2","ENST00000320356","missense_variant+inframe_insertion","ataaaaaat/aGTAGGAGTTCTCCACCCCTA|p.Ile150_Asn152delinsSerArgSerSerProProLeu/c.449_456delTAAAAAATinsGTAGGAGTTCTCCACCCCTA",16691,1274,16942,0.0751977334435132,0,0,0,0,0,0,0,1,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-24.184,"Deleterious",35.1325,"ComplexIndel","NA","NA","NA","NA","NA","NA","NA","NA","NA",1,1,"Artifact (1)"]
["UPN_Te4_021",8,117864832,"G","T","RAD21","ENST00000297338","missense_variant","cCt/cAt|p.Pro426His/c.1277C>A",2204,27,2249,0.0120053357047577,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.719,"Tolerated",24.68,20.22,2204,27,2249,0.0120053357047577,0,0,0,"NA",1,1,1,"Artifact (5)"]
["UPN_Te4_006",8,117864904,"C","T","RAD21","ENST00000297338","missense_variant","aGa/aAa|p.Arg402Lys/c.1205G>A",14115,374,14980,0.0249666221628838,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.427,"Tolerated",20.84,15.03,7890,12,7940,0.00151133501259446,6225,362,7040,0.0514204545454545,5.67186359504141E-108,10,10,"Artifact (5)"]
["UPN_Te4_016",8,117864908,"G","A","RAD21","ENST00000297338","missense_variant","Ctt/Ttt|p.Leu401Phe/c.1201C>T",8162,156,11332,0.0137663254500529,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.298,"Tolerated",19.05,15.97,4386,148,6207,0.0238440470436604,3776,8,5125,0.0015609756097561,6.05727870155011E-030,4,4,"Artifact (8)"]
["UPN_Te4_010",8,117864914,"C","T","RAD21","ENST00000297338","missense_variant","Gaa/Aaa|p.Glu399Lys/c.1195G>A",8316,220,8852,0.0248531405332128,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.925,"Tolerated",19.39,15.3,0,0,0,"NA",8316,220,8852,0.0248531405332128,1,9,9,"Artifact (5)"]
["UPN_Te4_005",8,117866590,"T","C","RAD21","ENST00000297338","missense_variant","gAt/gGt|p.Asp352Gly/c.1055A>G",32207,3498,35794,0.0977258758451137,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.667,"Deleterious",33.39,31.24,17576,44,17691,0.00248714035385224,14631,3454,18103,0.190797105452135,2,23,23,"Artifact (4)"]
["UPN_Te4_007",8,117866590,"T","C","RAD21","ENST00000297338","missense_variant","gAt/gGt|p.Asp352Gly/c.1055A>G",34078,4005,38171,0.104922585208666,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.667,"Deleterious",33.31,31.22,17833,42,17935,0.00234178979648732,16245,3963,20236,0.195839098636094,2,23,23,"Artifact (3)"]
["UPN_Te4_016",8,117866590,"T","C","RAD21","ENST00000297338","missense_variant","gAt/gGt|p.Asp352Gly/c.1055A>G",25907,836,26845,0.0311417396163159,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.667,"Deleterious",33.27,31.16,15633,54,15768,0.00342465753424658,10274,782,11077,0.0705967319671391,2,23,23,"Artifact (4)"]
["UPN_Te4_021",8,117868438,"C","A","RAD21","ENST00000297338","stop_gained","Gaa/Taa|p.Glu302*/c.904G>T",1584,39,1625,0.024,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",21.71,15.69,1584,39,1625,0.024,0,0,0,"NA",1,2,2,"Artifact (2)"]
["UPN_Te4_015",8,117868471,"T","A","RAD21","ENST00000297338","missense_variant","Act/Tct|p.Thr291Ser/c.871A>T",7135,115,7301,0.0157512669497329,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.431,"Tolerated",23.44,16.62,6477,114,6607,0.0172544271227486,658,1,694,0.00144092219020173,0.000422421652745399,6,6,"Artifact (8)"]
["UPN_Te4_018",8,117868515,"T","A","RAD21","ENST00000297338","missense_variant","gAt/gTt|p.Asp276Val/c.827A>T",12955,432,13425,0.0321787709497207,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.849,"Tolerated",22.41,15.45,11163,173,11359,0.0152302139272823,1792,259,2066,0.125363020329138,3.35433389111996E-104,4,4,"Artifact (4)"]
["UPN_Te4_010",8,117869646,"A","G","RAD21","ENST00000297338","missense_variant","tTa/tCa|p.Leu183Ser/c.548T>C",24553,4737,29385,0.161204696273609,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.034,"Tolerated",32.66,31.54,17544,4726,22343,0.211520386698295,7009,11,7042,0.00156205623402442,0,22,22,"Artifact (6)"]
["UPN_Te4_019",8,117869646,"A","G","RAD21","ENST00000297338","missense_variant","tTa/tCa|p.Leu183Ser/c.548T>C",8325,136,8475,0.016047197640118,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.034,"Tolerated",33.31,31.51,4739,130,4876,0.0266611977030353,3586,6,3599,0.00166712975826619,1.86061303042289E-024,22,22,"Artifact (10)"]
["UPN_Te4_006",8,117870653,"A","G","RAD21","ENST00000297338","missense_variant","gTg/gCg|p.Val140Ala/c.419T>C",12793,1347,14191,0.0949193150588401,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.336,"Tolerated",33.12,31.75,6411,1326,7747,0.171163030850652,6382,21,6444,0.00325884543761639,0,21,21,"Artifact (7)"]
["UPN_Te4_015",8,117870653,"A","G","RAD21","ENST00000297338","missense_variant","gTg/gCg|p.Val140Ala/c.419T>C",5707,372,6097,0.0610136132524192,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.336,"Tolerated",31.55,31.69,4533,367,4912,0.0747149837133551,1174,5,1185,0.00421940928270042,1.23857831681812E-028,21,21,"Artifact (8)"]
["UPN_Te4_016",8,117870653,"A","G","RAD21","ENST00000297338","missense_variant","gTg/gCg|p.Val140Ala/c.419T>C",10343,563,10941,0.0514578192121378,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.336,"Tolerated",32.19,31.51,6458,544,7016,0.0775370581527936,3885,19,3925,0.00484076433121019,1.26956029915365E-081,21,21,"Artifact (7)"]
["UPN_Te4_018",9,5070023,"CACAA","CT","JAK2","ENST00000381652","missense_variant+disruptive_inframe_deletion","cacaaa/cTa|p.His538_Lys539delinsLeu/c.1613_1616delACAAinsT",3938,380,3982,0.095429432446007,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-18.145,"Deleterious",32.742,"ComplexIndel","NA","NA","NA","NA","NA","NA","NA","NA","NA",1,2,"Artifact (2)"]
["UPN_Te4_007",9,21970950,"GC","G","CDKN2A","ENST00000498124","frameshift_variant","gcg/|p.Gly136fs/c.402delG",6883,75,6990,0.0107296137339056,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",33.99,"NA",6883,75,6990,0.0107296137339056,0,0,0,"NA",1,20,22,"Artifact (10)"]
["UPN_Te4_017",9,21970950,"GC","G","CDKN2A","ENST00000498124","frameshift_variant","gcg/|p.Gly136fs/c.402delG",2749,32,2788,0.0114777618364419,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",32.1,"NA",2749,32,2788,0.0114777618364419,0,0,0,"NA",1,20,22,"Artifact (10)"]
["UPN_Te4_003",9,21971098,"CG","C","CDKN2A","ENST00000498124","frameshift_variant","gcc/|p.Arg87fs/c.258delC",6528,78,6639,0.0117487573429733,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.34,"NA",1481,0,1488,0,5047,78,5151,0.0151426907396622,2,19,19,"Artifact (9)"]
["UPN_Te4_013",9,21971098,"CG","C","CDKN2A","ENST00000498124","frameshift_variant","gcc/|p.Arg87fs/c.258delC",2800,50,2870,0.0174216027874564,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.93,"NA",1165,0,1174,0,1635,50,1696,0.0294811320754717,2,19,19,"Artifact (9)"]
["UPN_Te4_002",9,21971110,"T","C","CDKN2A","ENST00000498124","missense_variant","cAc/cGc|p.His83Arg/c.248A>G",6989,1163,8186,0.142071829953579,0,1,0,0,1,1,0,0,3,"NO","NO","COSM1167961, COSM13253, COSM3656622","skin, lung","5, 1","NO","NO","NO","NO","NO","NO",-7.691,"Deleterious",32.17,31.58,1775,4,1788,0.00223713646532438,5214,1159,6398,0.18115035948734,2,23,23,"Artifact (2)"]
["UPN_Te4_012",9,21971110,"T","C","CDKN2A","ENST00000498124","missense_variant","cAc/cGc|p.His83Arg/c.248A>G",5348,153,5511,0.0277626565051715,0,0,0,0,1,1,0,0,2,"NO","NO","COSM1167961, COSM13253, COSM3656622","skin, lung","5, 1","NO","NO","NO","NO","NO","NO",-7.691,"Deleterious",33.22,31.07,2490,3,2498,0.00120096076861489,2858,150,3013,0.0497842681712579,2,23,23,"Artifact (2)"]
["UPN_Te4_013",9,21971110,"T","C","CDKN2A","ENST00000498124","missense_variant","cAc/cGc|p.His83Arg/c.248A>G",2708,139,2860,0.0486013986013986,0,0,0,0,1,1,0,0,2,"NO","NO","COSM1167961, COSM13253, COSM3656622","skin, lung","5, 1","NO","NO","NO","NO","NO","NO",-7.691,"Deleterious",32.46,31.25,1159,3,1174,0.00255536626916525,1549,136,1686,0.0806642941874259,2,23,23,"Artifact (2)"]
["UPN_Te4_022",9,21971110,"T","C","CDKN2A","ENST00000498124","missense_variant","cAc/cGc|p.His83Arg/c.248A>G",7219,214,7449,0.0287286884145523,0,0,0,0,1,1,0,0,2,"NO","NO","COSM1167961, COSM13253, COSM3656622","skin, lung","5, 1","NO","NO","NO","NO","NO","NO",-7.691,"Deleterious",33.31,31.53,3502,7,3521,0.00198807157057654,3717,207,3928,0.0526985743380855,2,23,23,"Artifact (2)"]
["UPN_Te4_001",9,21974681,"A","G","CDKN2A","ENST00000498124","missense_variant","aTc/aCc|p.Ile49Thr/c.146T>C",8473,255,8755,0.029126213592233,0,0,0,0,1,1,0,1,3,"NO","NO","COSM303861, COSM303862","haematopoietic_and_lymphoid_tissue",2,"NO","rs199907548","NO",0.0004365,"NO","NO",-3.674,"Deleterious",34.81,34.14,2940,239,3185,0.0750392464678179,5533,16,5570,0.00287253141831239,2,38,38,"Artifact (2)"]
["UPN_Te4_009",9,21974681,"A","G","CDKN2A","ENST00000498124","missense_variant","aTc/aCc|p.Ile49Thr/c.146T>C",3020,71,3102,0.0228884590586718,0,0,0,0,1,1,0,1,3,"NO","NO","COSM303861, COSM303862","haematopoietic_and_lymphoid_tissue",2,"NO","rs199907548","NO",0.0004365,"NO","NO",-3.674,"Deleterious",35.01,35.72,486,64,552,0.115942028985507,2534,7,2550,0.00274509803921569,2,38,38,"Artifact (2)"]
["UPN_Te4_021",9,21974681,"A","G","CDKN2A","ENST00000498124","missense_variant","aTc/aCc|p.Ile49Thr/c.146T>C",7875,102,7981,0.0127803533391806,0,0,0,0,1,1,0,1,3,"NO","NO","COSM303861, COSM303862","haematopoietic_and_lymphoid_tissue",2,"NO","rs199907548","NO",0.0004365,"NO","NO",-3.674,"Deleterious",35.27,35.37,2492,91,2583,0.035230352303523,5383,11,5398,0.00203779177473138,2,38,38,"Artifact (4)"]
["UPN_Te4_006",9,133738340,"A","G","ABL1","ENST00000372348","missense_variant","aAg/aGg|p.Lys266Arg/c.797A>G",13616,2886,16539,0.1744966443,1,1,0,0,1,1,0,0,4,0.3488,"NO","NO","NA","NA","rs34549764","rs34549764","NO",0.002792,"NO","NO",-2.726,"Deleterious",34.79,34.78,10400,2855,13266,0.2152118197,3216,31,3273,0.0094714329,2,24,24,"Artifact (4)"]
["UPN_Te4_015",9,133738340,"A","G","ABL1","ENST00000372348","missense_variant","aAg/aGg|p.Lys266Arg/c.797A>G",14335,1304,15737,0.0828620449,0,0,0,0,1,1,0,0,2,0.3488,"NO","NO","NA","NA","rs34549764","rs34549764","NO",0.002792,"NO","NO",-2.726,"Deleterious",34.29,34.62,5598,1284,6896,0.1861948956,8737,20,8841,0.0022621875,2,24,24,"Artifact (10)"]
["UPN_Te4_015",9,133738343,"TG","T","ABL1","ENST00000372348","frameshift_variant","ggc/|p.Gly268fs/c.803delG",15486,172,15735,0.0109310454401017,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.74,"NA",6840,19,6887,0.00275882096703935,8646,153,8848,0.0172920433996383,2,8,8,"Artifact (5)"]
["UPN_Te4_003",9,139390634,"C","A","NOTCH1","ENST00000277541","missense_variant","caG/caT|p.Gln2519His/c.7557G>T",1945,24,2012,0.0119284294234592,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.187,"Tolerated",26.42,25,1014,13,1029,0.0126336248785228,931,11,983,0.0111902339776195,1,1,1,"Artifact (5)"]
["UPN_Te4_003",9,139390638,"T","G","NOTCH1","ENST00000277541","missense_variant","gAc/gCc|p.Asp2518Ala/c.7553A>C",1814,172,1997,0.086129193790686,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.834,"Deleterious",22.25,15.7,841,162,1008,0.160714285714286,973,10,989,0.0101112234580384,1.29687679846097E-038,15,15,"Artifact (6)"]
["UPN_Te4_013",9,139390638,"T","G","NOTCH1","ENST00000277541","missense_variant","gAc/gCc|p.Asp2518Ala/c.7553A>C",1469,162,1639,0.0988407565588774,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.834,"Deleterious",23.31,16.46,684,149,836,0.17822966507177,785,13,803,0.0161892901618929,5.71809969359931E-032,15,15,"Artifact (6)"]
["UPN_Te4_005",9,139390662,"A","G","NOTCH1","ENST00000277541","missense_variant","cTc/cCc|p.Leu2510Pro/c.7529T>C",6037,1131,7327,0.154360584140849,0,1,0,0,1,0,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.989,"Tolerated",30.03,31.54,4908,1131,6073,0.186234151160876,1129,0,1254,0,7.28092403089471E-093,22,22,"Artifact (6)"]
["UPN_Te4_014",9,139390662,"A","G","NOTCH1","ENST00000277541","missense_variant","cTc/cCc|p.Leu2510Pro/c.7529T>C",9823,508,10731,0.047339483738701,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.989,"Tolerated",28.75,31.54,5656,506,6170,0.0820097244732577,4167,2,4561,0.000438500328875247,1.45877741882469E-113,22,22,"Artifact (7)"]
["UPN_Te4_021",9,139390662,"A","G","NOTCH1","ENST00000277541","missense_variant","cTc/cCc|p.Leu2510Pro/c.7529T>C",9521,283,9963,0.0284050988658035,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.989,"Tolerated",29.78,31.46,5716,280,6004,0.0466355762824783,3805,3,3959,0.0007577671129073,3.51185196247153E-056,22,22,"Artifact (7)"]
["UPN_Te4_014",9,139390830,"T","G","NOTCH1","ENST00000277541","missense_variant","cAc/cCc|p.His2454Pro/c.7361A>C",6216,64,6351,0.0100771532042198,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.327,"Tolerated",21.03,15.59,0,0,0,"NA",6216,64,6351,0.0100771532042198,1,3,3,"Artifact (4)"]
["UPN_Te4_006",9,139390944,"TGTG","T","NOTCH1","ENST00000277541","inframe_deletion","cca/|p.Pro2411del/c.7231_7233delCCA",6123,173,6308,0.0274254914,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",0.001557,"NO","NO",-0.168,"Tolerated",35.05,"NA",6120,173,6305,0.0274385408,3,0,3,0,1,22,22,"Artifact (13)"]
["UPN_Te4_007",9,139390944,"TGTG","T","NOTCH1","ENST00000277541","inframe_deletion","cca/|p.Pro2411del/c.7231_7233delCCA",5422,170,5628,0.0302061123,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",0.001557,"NO","NO",-0.168,"Tolerated",34.96,"NA",5422,170,5628,0.0302061123,0,0,0,"NA",1,22,22,"Artifact (13)"]
["UPN_Te4_016",9,139390944,"TGTG","T","NOTCH1","ENST00000277541","inframe_deletion","cca/|p.Pro2411del/c.7231_7233delCCA",4939,103,5053,0.0203839303,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",0.001557,"NO","NO",-0.168,"Tolerated",34.86,"NA",4939,103,5053,0.0203839303,0,0,0,"NA",1,22,22,"Artifact (13)"]
["UPN_Te4_013",9,139391206,"TC","T","NOTCH1","ENST00000277541","frameshift_variant","cgg/|p.Ser2329fs/c.6980delG",5821,69,5912,0.0116711772665765,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.31,"NA",2887,34,2933,0.0115922263893624,2934,35,2979,0.0117489090298758,1,1,1,"Artifact (4)"]
["UPN_Te4_003",9,139391493,"T","C","NOTCH1","ENST00000277541","missense_variant","cAc/cGc|p.His2233Arg/c.6698A>G",10739,1209,12010,0.100666111573689,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.448,"Tolerated",33.02,31.7,5494,16,5541,0.00288756542140408,5245,1193,6469,0.184417993507497,2,22,22,"Artifact (4)"]
["UPN_Te4_012",9,139391493,"T","C","NOTCH1","ENST00000277541","missense_variant","cAc/cGc|p.His2233Arg/c.6698A>G",9368,254,9652,0.0263157894736842,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.448,"Tolerated",33.14,31.89,4589,3,4607,0.000651182982418059,4779,251,5045,0.0497522299306244,2,22,22,"Artifact (5)"]
["UPN_Te4_021",9,139391493,"T","C","NOTCH1","ENST00000277541","missense_variant","cAc/cGc|p.His2233Arg/c.6698A>G",17335,447,17826,0.0250757320767418,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.448,"Tolerated",33.28,31.75,8660,16,8697,0.00183971484419915,8675,431,9129,0.0472121809617702,2,22,22,"Artifact (5)"]
["UPN_Te4_006",9,139391798,"GC","G","NOTCH1","ENST00000277541","frameshift_variant","ctg/|p.Gly2131fs/c.6387delG",11532,147,11730,0.0125319693094629,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.97,"NA",7,0,7,0,11525,147,11723,0.0125394523586113,1,21,21,"Artifact (9)"]
["UPN_Te4_013",9,139391798,"GC","G","NOTCH1","ENST00000277541","frameshift_variant","ctg/|p.Gly2131fs/c.6387delG",3262,57,3336,0.0170863309352518,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.5,"NA",0,0,0,"NA",3262,57,3336,0.0170863309352518,1,21,21,"Artifact (9)"]
["UPN_Te4_018",9,139391798,"GC","G","NOTCH1","ENST00000277541","frameshift_variant","ctg/|p.Gly2131fs/c.6387delG",13528,175,13792,0.0126885150812065,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.28,"NA",3,0,3,0,13525,175,13789,0.0126912756545072,1,21,21,"Artifact (9)"]
["UPN_Te4_005",9,139391895,"T","C","NOTCH1","ENST00000277541","missense_variant","gAc/gGc|p.Asp2099Gly/c.6296A>G",13286,2132,15475,0.137770597738288,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.508,"Deleterious",32.7,31.63,4260,15,4293,0.00349406009783368,9026,2117,11182,0.189322124843498,2,22,22,"Artifact (3)"]
["UPN_Te4_014",9,139391895,"T","C","NOTCH1","ENST00000277541","missense_variant","gAc/gGc|p.Asp2099Gly/c.6296A>G",19744,1280,21126,0.0605888478651898,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.508,"Deleterious",32.41,31.51,6241,21,6305,0.00333068992862807,13503,1259,14821,0.084947034613049,2,22,22,"Artifact (4)"]
["UPN_Te4_015",9,139392004,"T","C","NOTCH1","ENST00000277541","missense_variant","Aca/Gca|p.Thr2063Ala/c.6187A>G",88,21,157,0.133757961783439,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.715,"Deleterious",15.26,16.1,0,0,0,"NA",88,21,157,0.133757961783439,1,8,8,"Artifact (2)"]
["UPN_Te4_004",9,139392006,"T","C","NOTCH1","ENST00000277541","missense_variant","gAg/gGg|p.Glu2062Gly/c.6185A>G",48,20,75,0.266666666666667,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.508,"Deleterious",18.85,18.4,0,0,0,"NA",48,20,75,0.266666666666667,1,91,91,"Artifact (4)"]
["UPN_Te4_008",9,139392009,"T","C","NOTCH1","ENST00000277541","missense_variant","gAg/gGg|p.Glu2061Gly/c.6182A>G",222,40,266,0.150375939849624,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.542,"Deleterious",16.6,18.08,0,0,0,"NA",222,40,266,0.150375939849624,1,25,25,"Artifact (5)"]
["UPN_Te4_012",9,139396878,"AG","A","NOTCH1","ENST00000277541","frameshift_variant","gcc/|p.Phe1744fs/c.5228delC",4926,52,4985,0.0104312938816449,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.44,"NA",3531,50,3586,0.0139431121026213,1395,2,1399,0.00142959256611866,2,8,8,"Artifact (6)"]
["UPN_Te4_017",9,139396886,"GC","G","NOTCH1","ENST00000277541","frameshift_variant","gcg/|p.Ala1741fs/c.5220delG",4320,52,4374,0.0118884316415181,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.54,"NA",3049,52,3101,0.0167687842631409,1271,0,1273,0,2,2,2,"Artifact (4)"]
["UPN_Te4_001",9,139396919,"G","C","NOTCH1","ENST00000277541","missense_variant","cCg/cGg|p.Pro1730Arg/c.5189C>G",13113,154,13363,0.0115243583027763,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.276,"Tolerated",33.87,31.69,8977,3,9067,0.000330870188596007,4136,151,4296,0.0351489757914339,2,16,16,"Artifact (8)"]
["UPN_Te4_010",9,139396919,"G","C","NOTCH1","ENST00000277541","missense_variant","cCg/cGg|p.Pro1730Arg/c.5189C>G",11314,328,11725,0.0279744136460554,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.276,"Tolerated",34.44,31.46,8674,4,8757,0.000456777435194701,2640,324,2968,0.109164420485175,2,16,16,"Artifact (6)"]
["UPN_Te4_004",9,139399294,"A","G","NOTCH1","ENST00000277541","missense_variant","Ttc/Ctc|p.Phe1617Leu/c.4849T>C",986,44,1033,0.042594385285576,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.827,"Deleterious",34.95,31.68,0,41,41,1,986,3,992,0.0030241935483871,2.95456662952628E-070,7,7,"Artifact (3)"]
["UPN_Te4_021",9,139399294,"A","G","NOTCH1","ENST00000277541","missense_variant","Ttc/Ctc|p.Phe1617Leu/c.4849T>C",2847,34,2884,0.0117891816920943,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.827,"Deleterious",35.48,32.94,0,25,25,1,2847,9,2859,0.00314795383001049,2.93205532410177E-054,7,7,"Artifact (2)"]
["UPN_Te4_008",9,139399408,"GCAC","G","NOTCH1","ENST00000277541","inframe_deletion","ctggtg/ctg|p.Val1575del/c.4722_4724delGGT",22328,282,22670,0.0124393472,0,0,0,0,1,0,0,1,2,1.4187,"NO","NO","NA","NA","NO","NO","NO",8.372E-005,"NO","NO",-9.811,"Deleterious",35.11,"NA",11120,140,11292,0.012398158,11208,142,11378,0.012480225,1,22,22,"Artifact (6)"]
["UPN_Te4_017",9,139399408,"GCAC","G","NOTCH1","ENST00000277541","inframe_deletion","ctggtg/ctg|p.Val1575del/c.4722_4724delGGT",6875,94,6979,0.0134689784,0,0,0,0,1,0,0,1,2,1.4187,"NO","NO","NA","NA","NO","NO","NO",8.372E-005,"NO","NO",-9.811,"Deleterious",34.76,"NA",3424,47,3478,0.0135135135,3451,47,3501,0.0134247358,1,22,22,"Artifact (6)"]
["UPN_Te4_005",10,89692998,"G","C","PTEN","ENST00000371953","missense_variant","aGa/aCa|p.Arg161Thr/c.482G>C",18166,484,18705,0.0258754343758353,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.078,"Tolerated",32.35,31.54,3391,1,3408,0.000293427230046948,14775,483,15297,0.0315748185918808,2,10,10,"Artifact (3)"]
["UPN_Te4_011",10,89692998,"G","C","PTEN","ENST00000371953","missense_variant","aGa/aCa|p.Arg161Thr/c.482G>C",20666,223,20945,0.0106469324421103,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.078,"Tolerated",32.59,31.37,6196,5,6219,0.000803987779385753,14470,218,14726,0.0148037484720902,2,10,10,"Artifact (4)"]
["UPN_Te4_004",10,89717748,"T","G","PTEN","ENST00000371953","missense_variant","tTc/tGc|p.Phe258Cys/c.773T>G",12179,134,12397,0.0108090667096878,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-4.583,"Deleterious",32.63,31.38,9272,133,9472,0.0140413851351351,2907,1,2925,0.000341880341880342,9.73414353026746E-015,8,8,"Artifact (5)"]
["UPN_Te4_018",10,112344080,"A","G","SMC3","ENST00000361804","missense_variant","Aga/Gga|p.Arg411Gly/c.1231A>G",39636,433,40258,0.0107556262109394,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.067,"Tolerated",33.72,32.48,20035,220,20304,0.0108353033884949,19601,213,19954,0.0106745514683773,0.923077936660791,4,4,"Artifact (3)"]
["UPN_Te4_010",10,112356293,"C","T","SMC3","ENST00000361804","missense_variant","Cgc/Tgc|p.Arg701Cys/c.2101C>T",2773,39,2819,0.0138346931536006,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.208,"Deleterious",34.72,34.44,0,0,0,"NA",2773,39,2819,0.0138346931536006,1,1,1,"Artifact (0)"]
["UPN_Te4_015",10,112363035,"A","G","SMC3","ENST00000361804","missense_variant","aAg/aGg|p.Lys1190Arg/c.3569A>G",9144,96,9315,0.0103059581320451,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.21,"Tolerated",32.88,31.14,4627,49,4704,0.0104166666666667,4517,47,4611,0.0101930166991976,1,5,5,"Artifact (4)"]
["UPN_Te4_016",11,533874,"T","G","HRAS","ENST00000417302","missense_variant","cAg/cCg|p.Gln61Pro/c.182A>C",4377,89,4509,0.0197383011754269,0,0,0,0,1,0,0,0,1,"NO","NO","COSM500","thyroid, upper_aerodigestive_tract","2, 1","NO","rs121913233","YES","NO","NO","NO",-5.437,"Deleterious",35.62,35.24,1119,0,1130,0,3258,89,3379,0.0263391535957384,2,5,7,"Artifact (2)"]
["UPN_Te4_010",11,533893,"T","G","HRAS","ENST00000417302","missense_variant","Atc/Ctc|p.Ile55Leu/c.163A>C",4295,57,4364,0.0130614115490376,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.985,"Tolerated",33.1,32,1600,0,1607,0,2695,57,2757,0.0206746463547334,2,1,1,"Artifact (3)"]
["UPN_Te4_018",11,534297,"A","C","HRAS","ENST00000417302","missense_variant","gTg/gGg|p.Val9Gly/c.26T>G",3327,109,3451,0.0315850478122283,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.601,"Deleterious",19.88,15.88,3326,109,3450,0.0315942028985507,1,0,1,0,1,5,5,"Artifact (3)"]
["UPN_Te4_002",11,32413593,"A","T","WT1","ENST00000332351","missense_variant","Tgt/Agt|p.Cys453Ser/c.1357T>A",7663,94,7811,0.0120343105876328,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-8.983,"Deleterious",26.58,20.06,7661,94,7809,0.0120373927519529,2,0,2,0,1,3,4,"Artifact (3)"]
["UPN_Te4_015",11,32413593,"A","T","WT1","ENST00000332351","missense_variant","Tgt/Agt|p.Cys453Ser/c.1357T>A",4942,83,5083,0.0163289396025969,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-8.983,"Deleterious",24.03,17.1,4936,83,5077,0.016348237147922,6,0,6,0,1,3,4,"Artifact (3)"]
["UPN_Te4_006",11,118307395,"CCCCCCGGCTGTGGCGGCCGCGGCGGCGGCGGCGGGAAGCAGCGGGGCTGGGGTTCCAGGGGGAGCGG","C","KMT2A","ENST00000389506","frameshift_variant","cccccggctgtggcggccgcggcggcggcggcgggaagcagcggggctggggttccagggggagcggcc/|p.Ala59fs/c.171_237delCCCGGCTGTGGCGGCCGCGGCGGCGGCGGCGGGAAGCAGCGGGGCTGGGGTTCCAGGGGGAGCGGCC",324,"NA",324,"NA",0,0,0,0,0,0,0,1,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.9,"NA",324,"NA",324,"NA",0,"NA",0,"NA","NA",1,1,"Artifact (1)"]
["UPN_Te4_007",11,118307399,"CCGGCTGTGGCGGCCGCGGCGGCGGCGGCGGGAAGCAGCGGGGCTGGGGTTCCAGGGGGAG","C","KMT2A","ENST00000389506","disruptive_inframe_deletion","gctgtggcggccgcggcggcggcggcgggaagcagcggggctggggttccagggggagcggcc/gcc|p.Val60_Ala79del/c.177_236delTGTGGCGGCCGCGGCGGCGGCGGCGGGAAGCAGCGGGGCTGGGGTTCCAGGGGGAGCGGC",136,"NA",137,"NA",1,0,0,0,0,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.694,"Deleterious",32.84,"NA",136,"NA",137,"NA",0,"NA",0,"NA","NA",13,14,"Artifact (5)"]
["UPN_Te4_010",11,118307407,"GGCGGCCGCGGCGGCGGCGGCGGGAAGCAGCGGGGCTGGGGTTCCAGGGGGA","G","KMT2A","ENST00000389506","disruptive_inframe_deletion","gcggcggcggcggcgggaagcagcggggctggggttccagggggagcggccgcc/gcc|p.Ala64_Ala80del/c.189_239delGGCGGCGGCGGCGGGAAGCAGCGGGGCTGGGGTTCCAGGGGGAGCGGCCGC",507,"NA",509,"NA",0,0,0,0,0,0,0,1,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.382,"Deleterious",34.49,"NA",507,"NA",509,"NA",0,"NA",0,"NA","NA",3,3,"Artifact (0)"]
["UPN_Te4_014",11,118307413,"CGCG","C","KMT2A","ENST00000389506","disruptive_inframe_deletion","gcggga/gga|p.Ala67del/c.200_202delCGG",2249,63,2882,0.0218598196,1,0,0,0,1,0,0,1,3,1.2031,"NO","NO","NO","O","NO","NO","NO",0.001779,"NO","NO",-0.617,"Tolerated",16.24,"NA",2249,63,2882,0.0218598196,0,0,0,"NA",1,11,11,"Artifact (11)"]
["UPN_Te4_015",11,118307432,"A","C","KMT2A","ENST00000389506","missense_variant","Agc/Cgc|p.Ser69Arg/c.205A>C",3070,69,3384,0.0203900709219858,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.06,"Tolerated",18.71,15.03,1129,44,1219,0.0360951599671862,1941,25,2165,0.0115473441108545,1.18623601586937E-005,1,9,"Artifact (3)"]
["UPN_Te4_014",11,118307432,"A","G","KMT2A","ENST00000389506","missense_variant","Agc/Ggc|p.Ser69Gly/c.205A>G",4649,75,5134,0.0146084924035839,0,0,0,0,0,0,0,1,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.211,"Tolerated",18.76,21.39,1677,59,1806,0.0326688815060908,2972,16,3328,0.00480769230769231,1.33090310913786E-013,8,9,"Artifact (7)"]
["UPN_Te4_002",11,118307582,"T","C","KMT2A","ENST00000389506","missense_variant","Tcg/Ccg|p.Ser119Pro/c.355T>C",131,20,152,0.131578947368421,0,1,0,1,1,0,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.264,"Tolerated",31.78,30.3,0,0,0,"NA",131,20,152,0.131578947368421,2,21,21,"Artifact (5)"]
["UPN_Te4_003",11,118307582,"T","C","KMT2A","ENST00000389506","missense_variant","Tcg/Ccg|p.Ser119Pro/c.355T>C",395,104,499,0.208416833667335,0,1,0,1,1,0,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.264,"Tolerated",31.82,31.62,0,0,0,"NA",395,104,499,0.208416833667335,2,21,21,"Artifact (5)"]
["UPN_Te4_012",11,118307582,"T","C","KMT2A","ENST00000389506","missense_variant","Tcg/Ccg|p.Ser119Pro/c.355T>C",853,45,899,0.050055617352614,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.264,"Tolerated",31.71,31.78,13,0,13,0,840,45,886,0.0507900677200903,2,21,21,"Artifact (6)"]
["UPN_Te4_022",11,118307582,"T","C","KMT2A","ENST00000389506","missense_variant","Tcg/Ccg|p.Ser119Pro/c.355T>C",1721,99,1823,0.0543060888645091,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.264,"Tolerated",31.78,32,12,0,12,0,1709,99,1811,0.0546659304251795,2,21,21,"Artifact (6)"]
["UPN_Te4_008",11,118348787,"A","G","KMT2A","ENST00000389506","missense_variant","aAg/aGg|p.Lys1147Arg/c.3440A>G",35480,426,35946,0.0118511099983308,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.53,"Tolerated",35.67,34.95,35480,426,35946,0.0118511099983308,0,0,0,"NA",1,22,22,"Artifact (7)"]
["UPN_Te4_019",11,118348787,"A","G","KMT2A","ENST00000389506","missense_variant","aAg/aGg|p.Lys1147Arg/c.3440A>G",8965,101,9070,0.011135611907387,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.53,"Tolerated",35.84,35.32,8965,101,9070,0.011135611907387,0,0,0,"NA",1,22,22,"Artifact (7)"]
["UPN_Te4_005",11,118352469,"A","G","KMT2A","ENST00000389506","missense_variant","aAg/aGg|p.Lys1225Arg/c.3674A>G",17020,187,17233,0.0108512737190274,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.934,"Tolerated",35.28,35.34,17020,187,17233,0.0108512737190274,0,0,0,"NA",1,21,21,"Artifact (7)"]
["UPN_Te4_014",11,118352469,"A","G","KMT2A","ENST00000389506","missense_variant","aAg/aGg|p.Lys1225Arg/c.3674A>G",17216,307,17553,0.0174898877684726,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.934,"Tolerated",35.06,34.81,17216,307,17553,0.0174898877684726,0,0,0,"NA",1,21,21,"Artifact (7)"]
["UPN_Te4_011",11,118352564,"A","G","KMT2A","ENST00000389506","missense_variant","Agc/Ggc|p.Ser1257Gly/c.3769A>G",32829,413,33650,0.0122734026745914,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO",8.236E-006,"NO","NO",-0.132,"Tolerated",28.98,31.76,16745,212,17026,0.0124515446963468,16084,201,16624,0.0120909528392685,0.92112628474502,4,4,"Artifact (5)"]
["UPN_Te4_016",11,118352604,"A","G","KMT2A","ENST00000389506","missense_variant","aAg/aGg|p.Lys1270Arg/c.3809A>G",11932,133,12224,0.0108802356020942,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.484,"Tolerated",31.57,32.9,0,0,0,"NA",11932,133,12224,0.0108802356020942,1,6,6,"Artifact (4)"]
["UPN_Te4_002",11,118352690,"T","C","KMT2A","ENST00000389506","missense_variant","Tcc/Ccc|p.Ser1299Pro/c.3895T>C",13843,3304,17188,0.192227135210612,0,1,0,1,1,0,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.604,"Tolerated",31.49,31.6,0,0,0,"NA",13843,3304,17188,0.192227135210612,2,22,22,"Artifact (5)"]
["UPN_Te4_011",11,118352690,"T","C","KMT2A","ENST00000389506","missense_variant","Tcc/Ccc|p.Ser1299Pro/c.3895T>C",14833,1543,16412,0.0940165732390933,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.604,"Tolerated",31.24,31.31,0,0,0,"NA",14833,1543,16412,0.0940165732390933,2,22,22,"Artifact (6)"]
["UPN_Te4_020",11,118352690,"T","C","KMT2A","ENST00000389506","missense_variant","Tcc/Ccc|p.Ser1299Pro/c.3895T>C",6956,392,7358,0.0532753465615656,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.604,"Tolerated",31.61,31.62,0,0,0,"NA",6956,392,7358,0.0532753465615656,2,22,22,"Artifact (6)"]
["UPN_Te4_008",11,118374237,"G","C","KMT2A","ENST00000389506","missense_variant","Gaa/Caa|p.Glu2541Gln/c.7621G>C",18706,585,19338,0.0302513186472231,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.085,"Tolerated",31.55,31.24,0,0,0,"NA",18706,585,19338,0.0302513186472231,2,12,12,"Artifact (6)"]
["UPN_Te4_009",11,119148955,"A","G","CBL","ENST00000264033","missense_variant","aAg/aGg|p.Lys392Arg/c.1175A>G",8185,83,8292,0.0100096478533526,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.635,"Tolerated",35.12,35.37,0,0,0,"NA",8185,83,8292,0.0100096478533526,1,8,8,"Artifact (6)"]
["UPN_Te4_006",11,119149355,"TATG","T","CBL","ENST00000264033","disruptive_inframe_deletion","gatgaa/gaa|p.Asp460del/c.1380_1382delTGA",16659,415,17203,0.0241236993547637,0,0,1,0,1,0,1,1,4,"NO","NO","NO","NA","NA","NO","NO","NO",0.000733,"NO","NO",-3.45,"Deleterious",34.08,"NA",2,0,2,0,16657,415,17201,0.0241265042730074,1,22,22,"Artifact (3)"]
["UPN_Te4_015",11,119149355,"TATG","T","CBL","ENST00000264033","disruptive_inframe_deletion","gatgaa/gaa|p.Asp460del/c.1380_1382delTGA",8605,184,8899,0.0206764805034274,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",0.000733,"NO","NO",-3.45,"Deleterious",33.67,"NA",3,0,3,0,8602,184,8896,0.0206834532374101,1,22,22,"Artifact (4)"]
["UPN_Te4_016",11,119149355,"TATG","T","CBL","ENST00000264033","disruptive_inframe_deletion","gatgaa/gaa|p.Asp460del/c.1380_1382delTGA",10135,225,10463,0.0215043486571729,0,0,1,0,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO",0.000733,"NO","NO",-3.45,"Deleterious",33.63,"NA",0,0,0,"NA",10135,225,10463,0.0215043486571729,1,22,22,"Artifact (4)"]
["UPN_Te4_002",11,119149376,"C","G","CBL","ENST00000264033","missense_variant","Cga/Gga|p.Arg462Gly/c.1384C>G",32493,2022,34655,0.0583465589381042,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.502,"Tolerated",33.16,31.5,17462,2013,19538,0.103029992834476,15031,9,15117,0.000595356221472514,0,16,16,"Artifact (8)"]
["UPN_Te4_009",12,12006418,"T","C","ETV6","ENST00000396373","missense_variant","cTt/cCt|p.Leu129Pro/c.386T>C",7408,85,7533,0.0112836851188106,0,0,0,1,1,0,0,1,3,"NO","NO","COSM4039283","stomach",1,"NO","NO","NO","NO","NO","NO",-1.148,"Tolerated",34.97,33.31,7408,85,7533,0.0112836851188106,0,0,0,"NA",1,1,1,"Artifact (1)"]
["UPN_Te4_017",12,12022508,"T","C","ETV6","ENST00000396373","missense_variant","cTg/cCg|p.Leu205Pro/c.614T>C",5306,56,5373,0.0104224827842918,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.167,"Tolerated",34.03,33.02,0,17,17,1,5306,39,5356,0.00728155339805825,1.42808650607371E-035,1,1,"Artifact (4)"]
["UPN_Te4_010",12,25380274,"C","G","KRAS","ENST00000256078","missense_variant","Gag/Cag|p.Glu62Gln/c.184G>C",19117,274,19432,0.0141004528612598,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.926,"Deleterious",33.65,31.3,8857,269,9153,0.0293892712771769,10260,5,10279,0.000486428640918377,6.01363524521603E-081,9,9,"Artifact (6)"]
["UPN_Te4_006",13,28608541,"G","C","FLT3","ENST00000241453","missense_variant","cCc/cGc|p.Pro534Arg/c.1601C>G",17364,1019,18416,0.0553323197219809,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.513,"Tolerated",31.66,31.52,0,0,0,"NA",17364,1019,18416,0.0553323197219809,2,16,16,"Artifact (6)"]
["UPN_Te4_016",13,28608541,"G","C","FLT3","ENST00000241453","missense_variant","cCc/cGc|p.Pro534Arg/c.1601C>G",19365,385,19797,0.0194473910188412,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.513,"Tolerated",31.56,31.07,2,0,2,0,19363,385,19795,0.019449355897954,2,16,16,"Artifact (8)"]
["UPN_Te4_005",15,90631917,"T","TC","IDH2","ENST00000330062","frameshift_variant","ctg/ctGg|p.Thr146fs/c.428_429insG",26097,406,26439,0.015356102727032,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",30.94,"NA",13221,207,13349,0.0155067795340475,12876,199,13090,0.0152024446142093,0.920348713213916,22,44,"Artifact (10)"]
["UPN_Te4_010",15,90631917,"T","TC","IDH2","ENST00000330062","frameshift_variant","ctg/ctGg|p.Thr146fs/c.428_429insG",26595,356,27013,0.0131788398178655,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",31.01,"NA",13434,180,13596,0.0132391879964696,13161,176,13417,0.0131176865171052,1,22,44,"Artifact (10)"]
["UPN_Te4_019",15,90631917,"T","TC","IDH2","ENST00000330062","frameshift_variant","ctg/ctGg|p.Thr146fs/c.428_429insG",10003,128,10149,0.0126120800078825,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",30.51,"NA",5064,64,5103,0.0125416421712718,4939,64,5046,0.012683313515656,0.929206053347425,22,44,"Artifact (10)"]
["UPN_Te4_006",15,90631917,"TC","T","IDH2","ENST00000330062","frameshift_variant","ctg/|p.Thr146fs/c.429delG",28170,458,28752,0.015929326655537,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",4.118E-005,"NO","NO","NA","NA",34.05,"NA",14202,232,14476,0.0160265266648245,13968,226,14276,0.0158307649201457,0.925011966530836,22,44,"Artifact (8)"]
["UPN_Te4_015",15,90631917,"TC","T","IDH2","ENST00000330062","frameshift_variant","ctg/|p.Thr146fs/c.429delG",19955,415,20526,0.020218259768099,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO",4.118E-005,"NO","NO","NA","NA",32.98,"NA",10098,213,10366,0.0205479452054795,9857,202,10160,0.0198818897637795,0.804175474047954,22,44,"Artifact (6)"]
["UPN_Te4_015",15,90631953,"T","C","IDH2","ENST00000330062","missense_variant","Agt/Ggt|p.Ser134Gly/c.400A>G",10081,113,10226,0.0110502640328574,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.749,"Deleterious",33.8,32.74,0,0,0,"NA",10081,113,10226,0.0110502640328574,1,4,4,"Artifact (2)"]
["UPN_Te4_005",17,7572962,"GT","G","TP53","ENST00000269305","frameshift_variant","aaa/|p.Lys382fs/c.1141delA",2881,43,2949,0.0145812139708376,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.13,"NA",2881,43,2949,0.0145812139708376,0,0,0,"NA",1,22,22,"Artifact (9)"]
["UPN_Te4_017",17,7572962,"GT","G","TP53","ENST00000269305","frameshift_variant","aaa/|p.Lys382fs/c.1141delA",4996,75,5121,0.0146455770357352,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.52,"NA",4996,75,5121,0.0146455770357352,0,0,0,"NA",1,22,22,"Artifact (9)"]
["UPN_Te4_008",17,7574008,"A","T","TP53","ENST00000269305","missense_variant","aTg/aAg|p.Met340Lys/c.1019T>A",6237,73,6327,0.0115378536431168,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.998,"Deleterious",33.07,32.18,3133,35,3178,0.0110132158590308,3104,38,3149,0.0120673229596697,0.725099029876515,1,1,"Artifact (0)"]
["UPN_Te4_010",17,7574021,"C","T","TP53","ENST00000269305","missense_variant","Gag/Aag|p.Glu336Lys/c.1006G>A",7868,80,7953,0.0100590971960267,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.185,"Tolerated",33.34,32.69,3955,41,3998,0.0102551275637819,3913,39,3955,0.00986093552465234,0.910731781613954,1,1,"Artifact (3)"]
["UPN_Te4_009",17,7578394,"T","C","TP53","ENST00000269305","missense_variant","cAt/cGt|p.His179Arg/c.536A>G",9231,891,10175,0.0875675675675676,0,0,0,0,1,1,0,0,2,"NO","NO","COSM214222, COSM10889, COSM1645241, COSM214223, COSM3396280","biliary_tract, breast, central_nervous_system, endometrium, haematopoietic_and_lymphoid_tissue, large_intestine, lung, oesophagus, ovary, pancreas, prostate, stomach, upper_aerodigestive_tract, cervix, liver, urinary_tract","11, 38, 66, 6, 13, 32, 20, 41, 26, 18, 11, 15, 17, 1, 1, 4","NO","NO","NO","NO","NO","NO",-7.562,"Deleterious",33.71,31.45,5892,16,5947,0.0026904321506642,3339,875,4228,0.206953642384106,2,25,25,"Artifact (2)"]
["UPN_Te4_006",17,7578502,"A","T","TP53","ENST00000269305","missense_variant","gTg/gAg|p.Val143Glu/c.428T>A",12658,131,12839,0.0102032868603474,0,0,0,0,1,0,0,0,1,"NO","NO","COSM3522708, COSM3522705, COSM45382, COSM3522707, COSM3522706","oesophagus, skin, breast, large_intestine, lung, upper_aerodigestive_tract, urinary_tract","5, 5, 1, 1, 1, 1, 1","NO","NO","NO","NO","NO","NO",-5.68,"Deleterious",32.69,25.71,1,33,34,0.970588235294118,12657,98,12805,0.00765326044513862,9.42241551082926E-067,6,6,"Artifact (4)"]
["UPN_Te4_016",17,7578502,"A","T","TP53","ENST00000269305","missense_variant","gTg/gAg|p.Val143Glu/c.428T>A",9591,178,9812,0.0181410517733388,0,0,0,0,1,0,0,1,2,"NO","NO","COSM3522708, COSM3522705, COSM45382, COSM3522707, COSM3522706","oesophagus, skin, breast, large_intestine, lung, upper_aerodigestive_tract, urinary_tract","5, 5, 1, 1, 1, 1, 1","NO","NO","NO","NO","NO","NO",-5.68,"Deleterious",32.35,27.07,0,58,58,1,9591,120,9754,0.0123026450686898,4.28328235193291E-106,6,6,"Artifact (3)"]
["UPN_Te4_007",17,7579548,"G","C","TP53","ENST00000269305","missense_variant","Ccg/Gcg|p.Pro47Ala/c.139C>G",13560,277,13889,0.0199438404492764,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.02,"Tolerated",33.32,30.37,10478,18,10532,0.00170907709836688,3082,259,3357,0.0771522192433721,2,14,14,"Artifact (9)"]
["UPN_Te4_013",17,7579861,"T","C","TP53","ENST00000269305","missense_variant","Aca/Gca|p.Thr18Ala/c.52A>G",2147,22,2191,0.0100410771337289,0,0,0,0,1,0,0,0,1,"NO","NO","COSM220787, COSM220786, COSM220785, COSM220788","haematopoietic_and_lymphoid_tissue",4,"NO","NO","NO","NO","NO","NO",-1.657,"Tolerated",29.64,27.95,1086,9,1106,0.0081374321880651,1061,13,1085,0.0119815668202765,0.398394886133434,1,1,"Artifact (3)"]
["UPN_Te4_015",17,74732955,"CG","C","SRSF2","ENST00000392485","frameshift_variant","cgc/|p.Pro96fs/c.282delC",6285,81,6397,0.012662185399406,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.16,"NA",3175,41,3232,0.0126856435643564,3110,40,3165,0.0126382306477093,1,9,9,"Artifact (3)"]
["UPN_Te4_004",17,74733032,"C","G","SRSF2","ENST00000392485","missense_variant","Gct/Cct|p.Ala71Pro/c.211G>C",1885,35,1921,0.0182196772514315,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.237,"Deleterious",35.26,30.97,7,35,42,0.833333333333333,1878,0,1879,0,4.62491929676134E-068,7,7,"Artifact (6)"]
["UPN_Te4_022",17,74733032,"C","G","SRSF2","ENST00000392485","missense_variant","Gct/Cct|p.Ala71Pro/c.211G>C",2157,41,2201,0.0186278964107224,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.237,"Deleterious",35.44,32.1,0,40,40,1,2157,1,2161,0.000462748727441,9.96254359112902E-085,7,7,"Artifact (5)"]
["UPN_Te4_008",17,74733043,"T","G","SRSF2","ENST00000392485","missense_variant","gAc/gCc|p.Asp67Ala/c.200A>C",23009,438,23709,0.018473997216247,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.809,"Deleterious",35.03,35.16,17852,431,18524,0.0232671129345714,5157,7,5185,0.00135004821600771,2,23,23,"Artifact (6)"]
["UPN_Te4_017",17,74733043,"T","G","SRSF2","ENST00000392485","missense_variant","gAc/gCc|p.Asp67Ala/c.200A>C",5998,77,6142,0.0125366330185607,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.809,"Deleterious",35.34,34.65,4305,76,4442,0.0171094101755966,1693,1,1700,0.000588235294117647,2,23,23,"Artifact (7)"]
["UPN_Te4_004",17,74733085,"T","C","SRSF2","ENST00000392485","missense_variant","gAg/gGg|p.Glu53Gly/c.158A>G",11893,391,12337,0.0316932803761044,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.093,"Deleterious",34.65,31.7,10398,24,10465,0.00229335881509795,1495,367,1872,0.196047008547009,2,31,31,"Artifact (4)"]
["UPN_Te4_009",17,74733085,"T","C","SRSF2","ENST00000392485","missense_variant","gAg/gGg|p.Glu53Gly/c.158A>G",7310,292,7627,0.0382850399895109,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.093,"Deleterious",34.59,31.96,6246,13,6284,0.00206874602164227,1064,279,1343,0.207743857036485,2,31,31,"Artifact (4)"]
["UPN_Te4_016",17,74733222,"AG","A","SRSF2","ENST00000392485","frameshift_variant","cct/|p.Pro7fs/c.20delC",10115,105,10284,0.0102100350058343,0,0,0,0,0,0,0,1,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.73,"NA",0,0,0,"NA",10115,105,10284,0.0102100350058343,1,1,1,"Artifact (5)"]
["UPN_Te4_009",18,42532090,"G","C","SETBP1","ENST00000282030","missense_variant","Gcc/Ccc|p.Ala929Pro/c.2785G>C",4485,491,4988,0.0984362469927827,0,1,0,1,1,0,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.172,"Tolerated",31.64,31.58,7,0,7,0,4478,491,4981,0.0985745834169845,2,21,21,"Artifact (5)"]
["UPN_Te4_018",18,42532090,"G","C","SETBP1","ENST00000282030","missense_variant","Gcc/Ccc|p.Ala929Pro/c.2785G>C",12764,547,13351,0.0409707138042094,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.172,"Tolerated",31.51,31.34,0,0,0,"NA",12764,547,13351,0.0409707138042094,2,21,21,"Artifact (5)"]
["UPN_Te4_020",18,42532090,"G","C","SETBP1","ENST00000282030","missense_variant","Gcc/Ccc|p.Ala929Pro/c.2785G>C",11292,116,11451,0.0101301196402061,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.172,"Tolerated",31.77,31.5,0,0,0,"NA",11292,116,11451,0.0101301196402061,2,21,21,"Artifact (7)"]
["UPN_Te4_022",19,13054626,"A","G","CALR","ENST00000316448","missense_variant","Aag/Gag|p.Lys385Glu/c.1153A>G",4918,57,5126,0.0111197815060476,0,0,0,0,1,0,0,0,1,"NO",0,"NO","NA","NA","NO","NO","NO","NO","NO","NO",0.734,"Tolerated",22.07,19.72,2477,48,2588,0.0185471406491499,2441,9,2538,0.00354609929078014,1.53843262548315E-007,4,5,"Artifact (8)"]
["UPN_Te4_005",19,13054644,"A","G","CALR","ENST00000316448","missense_variant","Aaa/Gaa|p.Lys391Glu/c.1171A>G",3977,50,4113,0.012156576707999,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",1.476,"Tolerated",26.67,20.8,1971,39,2079,0.0187590187590188,2006,11,2034,0.00540806293018682,5.01683268881118E-005,8,8,"Artifact (7)"]
["UPN_Te4_001",19,33792480,"T","C","CEBPA","ENST00000498907","missense_variant","Aac/Gac|p.Asn281Asp/c.841A>G",17583,1391,19018,0.0731412346198338,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.096,"Tolerated",31.58,31.48,1361,2,1368,0.00146198830409357,16222,1389,17650,0.0786968838526912,2,22,22,"Artifact (6)"]
["UPN_Te4_010",19,33792480,"T","C","CEBPA","ENST00000498907","missense_variant","Aac/Gac|p.Asn281Asp/c.841A>G",12013,3444,15507,0.222093248210486,0,1,0,1,1,0,0,0,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.096,"Tolerated",31.16,31.6,2,0,2,0,12011,3444,15505,0.222121896162528,2,22,22,"Artifact (5)"]
["UPN_Te4_019",19,33792480,"T","C","CEBPA","ENST00000498907","missense_variant","Aac/Gac|p.Asn281Asp/c.841A>G",6919,236,7165,0.0329378925331472,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.096,"Tolerated",31.6,30.93,0,0,0,"NA",6919,236,7165,0.0329378925331472,2,22,22,"Artifact (6)"]
["UPN_Te4_020",19,33792508,"CGCGCCGCTGCCGCCACTCGCGCGGAGGTCGGGGTGCGCGGCGCCCAGCCCCTTGAGCGCGCTGCCAGGGCCCGGCAGGCCGGCGGCACCGAGCGCGG","C","CEBPA","ENST00000498907","frameshift_variant","cccgcgctcggtgccgccggcctgccgggccctggcagcgcgctcaaggggctgggcgccgcgcaccccgacctccgcgcgagtggcggcagcggcgcg/|p.Pro239fs/c.716_812delCCGCGCTCGGTGCCGCCGGCCTGCCGGGCCCTGGCAGCGCGCTCAAGGGGCTGGGCGCCGCGCACCCCGACCTCCGCGCGAGTGGCGGCAGCGGCGC",2,"NA",2,"NA",0,0,0,0,0,0,0,1,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34,"NA",2,"NA",2,"NA",0,"NA",0,"NA","NA",1,1,"Artifact (1)"]
["UPN_Te4_008",19,33792754,"GGGC","G","CEBPA","ENST00000498907","inframe_deletion","ccgccg/ccg|p.Pro186del/c.554_556delCGC",834,43,878,0.0489749431,0,0,0,0,1,0,0,1,2,3.0928,"NO","NO","NA","NA","NO","NO","NO",0.004374,"NO","NO",-0.265,"Tolerated",35.03,"NA",420,22,443,0.0496613995,414,21,435,0.0482758621,1,7,7,"Artifact (11)"]
["UPN_Te4_010",19,33792754,"GGGC","G","CEBPA","ENST00000498907","inframe_deletion","cagccg/cag|p.Pro183del/c.546_548delGCC",503,21,526,0.0399239544,0,0,0,0,1,0,0,1,2,3.0928,"NO","NO","NA","NA","NO","NO","NO",0.004374,"NO","NO",-0.265,"Tolerated",34.71,"NA",255,11,267,0.0411985019,248,10,259,0.0386100386,1,7,7,"Artifact (11)"]
["UPN_Te4_007",19,33792863,"G","C","CEBPA","ENST00000498907","missense_variant","cCg/cGg|p.Pro153Arg/c.458C>G",175,29,204,0.142156862745098,0,1,0,1,1,0,0,0,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.747,"Tolerated",31.36,31.38,0,0,0,"NA",175,29,204,0.142156862745098,2,11,11,"Artifact (1)"]
["UPN_Te4_011",19,33793007,"TCGC","T","CEBPA","ENST00000498907","inframe_deletion","ggc/|p.Gly99del/c.295_297delGGC",615,23,640,0.0359375,0,0,0,0,1,0,0,1,2,0.1827,"NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",0.146,"Tolerated",35.35,"NA",0,0,0,"NA",615,23,640,0.0359375,1,1,1,"Artifact (2)"]
["UPN_Te4_010",19,33793284,"G","A","CEBPA","ENST00000498907","missense_variant","Ccc/Tcc|p.Pro13Ser/c.37C>T",1991,31,2024,0.0153162055335968,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.3,"Tolerated",34.51,35.87,1273,0,1275,0,718,31,749,0.041388518024032,2,1,1,"Artifact (3)"]
["UPN_Te4_016",19,33793288,"CG","C","CEBPA","ENST00000498907","frameshift_variant","ccg/|p.Pro11fs/c.31delC",2272,59,2345,0.0251599147121535,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.86,"NA",1064,0,1072,0,1208,59,1273,0.0463472113118617,2,11,11,"Artifact (4)"]
["UPN_Te4_005",19,33793307,"T","C","CEBPA","ENST00000498907","missense_variant","gAc/gGc|p.Asp5Gly/c.14A>G",1815,119,1944,0.0612139917695473,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.083,"Tolerated",32.71,31.24,1237,1,1248,0.000801282051282051,578,118,696,0.169540229885057,2,21,21,"Artifact (6)"]
["UPN_Te4_014",19,33793307,"T","C","CEBPA","ENST00000498907","missense_variant","gAc/gGc|p.Asp5Gly/c.14A>G",3247,121,3392,0.0356721698113208,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.083,"Tolerated",32.06,31.74,1687,4,1711,0.00233781414377557,1560,117,1681,0.0696014277215943,2,21,21,"Artifact (6)"]
["UPN_Te4_008",19,33793380,"G","A","CEBPA","ENST00000498907","5_prime_UTR_premature_start_codon_gain_variant","|c.-60C>T",3757,47,3808,0.0123424369747899,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.2,30.26,1865,23,1891,0.01216287678477,1892,24,1917,0.0125195618153365,1,1,1,"Artifact (1)"]
["UPN_Te4_015",19,45297484,"GC","G","CBLC","ENST00000270279","frameshift_variant","cca/|p.Pro438fs/c.1313delC",8762,96,8908,0.0107768298158958,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.91,"NA",8756,95,8901,0.0106729580945961,6,1,7,0.142857142857143,0.0734652250742583,1,1,"Artifact (4)"]
["UPN_Te4_008",19,45297502,"GC","G","CBLC","ENST00000270279","frameshift_variant","ccc/|p.Arg445fs/c.1332delC",11765,175,11980,0.0146076794657763,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.68,"NA",11765,175,11980,0.0146076794657763,0,0,0,"NA",1,22,22,"Artifact (9)"]
["UPN_Te4_017",19,45297502,"GC","G","CBLC","ENST00000270279","frameshift_variant","ccc/|p.Arg445fs/c.1332delC",5193,61,5276,0.0115617892342684,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.65,"NA",5182,61,5265,0.0115859449192783,11,0,11,0,1,22,22,"Artifact (9)"]
["UPN_Te4_007",20,31022323,"C","A","ASXL1","ENST00000375687","missense_variant","tCc/tAc|p.Ser603Tyr/c.1808C>A",20528,233,20815,0.0111938505885179,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.146,"Tolerated",35.58,35.3,1425,0,1426,0,19103,233,19389,0.0120171231110423,2,6,6,"Artifact (6)"]
["UPN_Te4_008",20,31022331,"C","CG","ASXL1","ENST00000375687","frameshift_variant","ggt/ggGt|p.Trp608fs/c.1820dupG",18268,207,18404,0.011247554879374,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.22,"NA",1229,1,1235,0.000809716599190283,17039,206,17169,0.0119983691537073,2,1,1,"Artifact (4)"]
["UPN_Te4_019",20,31022341,"C","G","ASXL1","ENST00000375687","missense_variant","aCt/aGt|p.Thr609Ser/c.1826C>G",7862,84,8059,0.0104231294205236,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.546,"Deleterious",31.84,28.14,1257,0,1259,0,6605,84,6800,0.0123529411764706,2,1,10,"Artifact (3)"]
["UPN_Te4_001",20,31022413,"A","G","ASXL1","ENST00000375687","missense_variant","cAt/cGt|p.His633Arg/c.1898A>G",16409,1061,17577,0.0603629743,0,0,0,0,1,1,0,0,2,0.0118,0,"NO","NA","NA","NO","rs201280462","NO","NO","NO","YES",-0.1,"Tolerated",31.75,31.58,13375,1049,14458,0.0725549869,3034,12,3119,0.003847387,7.47714992381608E-072,22,22,"Artifact (12)"]
["UPN_Te4_010",20,31022413,"A","G","ASXL1","ENST00000375687","missense_variant","cAt/cGt|p.His633Arg/c.1898A>G",9022,2010,11060,0.1817359855,0,1,0,0,1,1,0,0,3,0.0118,0,"NO","NA","NA","NO","rs201280462","NO","NO","NO","YES",-0.1,"Tolerated",31.81,31.67,8007,2009,10033,0.2002392106,1015,1,1027,0.0009737098,1.14201525275485E-091,22,22,"Artifact (8)"]
["UPN_Te4_011",20,31022413,"A","G","ASXL1","ENST00000375687","missense_variant","cAt/cGt|p.His633Arg/c.1898A>G",15844,1340,17302,0.0774476939,0,0,0,0,1,1,0,0,2,0.0118,0,"NO","NA","NA","NO","rs201280462","NO","NO","NO","YES",-0.1,"Tolerated",31.8,31.61,12141,1321,13494,0.0978953609,3703,19,3808,0.0049894958,9.65893045929708E-117,22,22,"Artifact (12)"]
["UPN_Te4_020",20,31022413,"A","G","ASXL1","ENST00000375687","missense_variant","cAt/cGt|p.His633Arg/c.1898A>G",10881,541,11451,0.0472447821,0,0,0,0,1,1,0,0,2,0.0118,0,"NO","NA","NA","NO","rs201280462","NO","NO","NO","YES",-0.1,"Tolerated",32.1,31.63,8897,533,9441,0.0564558839,1984,8,2010,0.0039800995,1.48429509244689E-034,22,22,"Artifact (13)"]
["UPN_Te4_004",20,31022441,"A","AG","ASXL1","ENST00000375687","frameshift_variant","ggt/ggGt|p.Gly646fs/c.1934dupG",8634,381,8711,0.0437378027780967,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.16,"NA",7972,363,8002,0.0453636590852287,662,18,709,0.0253878702397743,0.03657019325971,42,86,"Artifact (8)"]
["UPN_Te4_015",20,31022441,"A","AG","ASXL1","ENST00000375687","frameshift_variant","ggt/ggGt|p.Gly646fs/c.1934dupG",13983,551,14192,0.0388246899661781,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.61,"NA",12060,485,12128,0.0399901055408971,1923,66,2064,0.0319767441860465,0.255336321340139,42,86,"Artifact (8)"]
["UPN_Te4_001",20,31022441,"AG","A","ASXL1","ENST00000375687","frameshift_variant","ggt/|p.Gly645fs/c.1934delG",16822,774,17711,0.0437016543391113,0,0,0,0,1,1,0,1,3,4.4879,"NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.05,"NA",13818,630,14542,0.0433227891624261,3004,144,3169,0.0454402019564531,0.59782084790531,43,86,"Artifact (6)"]
["UPN_Te4_010",20,31022441,"AG","A","ASXL1","ENST00000375687","frameshift_variant","ggt/|p.Gly645fs/c.1934delG",10722,474,11243,0.042159565952148,0,0,0,0,1,0,0,1,2,4.4879,"NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.34,"NA",9725,434,10200,0.0425490196078431,997,40,1043,0.0383509108341323,0.571449870563818,43,86,"Artifact (6)"]
["UPN_Te4_019",20,31022441,"AG","A","ASXL1","ENST00000375687","frameshift_variant","ggt/|p.Gly645fs/c.1934delG",7197,286,7513,0.0380673499267936,0,0,0,0,1,1,0,1,3,4.4879,"NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.28,"NA",6026,241,6293,0.0382965199427936,1171,45,1220,0.0368852459016393,0.870291102986231,43,86,"Artifact (6)"]
["UPN_Te4_004",20,31022790,"TG","T","ASXL1","ENST00000375687","frameshift_variant","tgc/|p.Cys759fs/c.2276delG",16169,345,16559,0.020834591460837,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.82,"NA",11469,0,11511,0,4700,345,5048,0.0683438985736926,2,22,22,"Artifact (7)"]
["UPN_Te4_007",20,31022790,"TG","T","ASXL1","ENST00000375687","frameshift_variant","tgc/|p.Cys759fs/c.2276delG",24520,822,25444,0.0323062411570508,0,0,1,0,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.82,"NA",16334,0,16414,0,8186,822,9030,0.0910299003322259,2,22,22,"Artifact (6)"]
["UPN_Te4_015",20,31022790,"TG","T","ASXL1","ENST00000375687","frameshift_variant","tgc/|p.Cys759fs/c.2276delG",17689,437,18222,0.0239819997804851,0,0,1,0,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.53,"NA",10122,0,10192,0,7567,437,8030,0.0544209215442092,2,22,22,"Artifact (6)"]
["UPN_Te4_017",20,31023021,"A","ATTTTTTTTT","ASXL1","ENST00000375687","disruptive_inframe_insertion","act/aTTTTTTTTTct|p.Thr836delinsIlePhePheSer/c.2506_2507insTTTTTTTTT",22488,429,22640,0.0189487632508834,0,1,0,0,0,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.334,"Deleterious",32.76,"NA",11535,0,11593,0,10953,429,11047,0.0388340725988956,6.50205688902301E-133,5,5,"Artifact (7)"]
["UPN_Te4_018",20,31023025,"TGAAGGATCC","T","ASXL1","ENST00000375687","disruptive_inframe_deletion","atgaaggatcct/att|p.Met837_Pro840delinsIle/c.2511_2519delGAAGGATCC",46718,537,48443,0.011085192907128,0,1,0,0,0,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.033,"Tolerated",33.04,"NA",24845,0,24930,0,21873,537,23513,0.0228384298047888,3.34939013441392E-176,8,8,"Artifact (8)"]
["UPN_Te4_008",20,31023123,"G","C","ASXL1","ENST00000375687","missense_variant","Ggc/Cgc|p.Gly870Arg/c.2608G>C",39881,1433,41440,0.0345801158301158,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.938,"Tolerated",32.84,31.21,21026,15,21125,0.000710059171597633,18855,1418,20315,0.0698006399212405,2,15,15,"Artifact (6)"]
["UPN_Te4_014",20,31023234,"G","A","ASXL1","ENST00000375687","missense_variant","Gta/Ata|p.Val907Ile/c.2719G>A",33446,359,33866,0.0106006023740625,0,0,0,0,1,1,0,1,3,"NO",0,"NO","NO","O","NO","rs201990697","NO",8.236E-006,"NO","NO",-0.304,"Tolerated",35.08,35.12,7200,337,7550,0.044635761589404,26246,22,26316,0.000835993312053504,2,10,10,"Artifact (4)"]
["UPN_Te4_013",20,31023460,"A","G","ASXL1","ENST00000375687","missense_variant","aAg/aGg|p.Lys982Arg/c.2945A>G",11667,134,11848,0.0113099257258609,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.116,"Tolerated",33.38,32.68,5803,66,5885,0.011214953271028,5864,68,5963,0.0114036558779138,0.930941292941993,9,9,"Artifact (3)"]
["UPN_Te4_004",20,31023637,"C","G","ASXL1","ENST00000375687","missense_variant","gCc/gGc|p.Ala1041Gly/c.3122C>G",36271,1641,38097,0.043074257815576,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.523,"Tolerated",32.85,31.35,26663,1634,28427,0.0574805642522954,9608,7,9670,0.000723888314374354,9.40625820058434E-199,16,16,"Artifact (8)"]
["UPN_Te4_005",20,31023637,"C","G","ASXL1","ENST00000375687","missense_variant","gCc/gGc|p.Ala1041Gly/c.3122C>G",44710,1715,46595,0.036806524305183,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.523,"Tolerated",32.92,31.47,31881,1706,33685,0.0506456879916877,12829,9,12910,0.00069713400464756,3.87506275619035E-227,16,16,"Artifact (8)"]
["UPN_Te4_015",20,31023637,"C","G","ASXL1","ENST00000375687","missense_variant","gCc/gGc|p.Ala1041Gly/c.3122C>G",38056,591,38922,0.0151842145830122,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.523,"Tolerated",31.91,31.07,26751,575,27492,0.0209151753237305,11305,16,11430,0.00139982502187227,2.2227436141527E-065,16,16,"Artifact (9)"]
["UPN_Te4_008",20,31023723,"T","C","ASXL1","ENST00000375687","missense_variant","Tgt/Cgt|p.Cys1070Arg/c.3208T>C",62888,3076,66304,0.0463923745173745,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.895,"Tolerated",32.39,31.62,24983,55,25170,0.00218514104092173,37905,3021,41134,0.0734428939563378,2,27,27,"Artifact (6)"]
["UPN_Te4_017",20,31023723,"T","C","ASXL1","ENST00000375687","missense_variant","Tgt/Cgt|p.Cys1070Arg/c.3208T>C",29936,485,30506,0.0158985117681768,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.895,"Tolerated",33.01,31.76,11284,22,11326,0.00194243333921949,18652,463,19180,0.0241397288842544,2,27,27,"Artifact (8)"]
["UPN_Te4_008",20,31023955,"T","G","ASXL1","ENST00000375687","missense_variant","cTa/cGa|p.Leu1147Arg/c.3440T>G",59931,649,60837,0.0106678501569768,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.692,"Tolerated",32.35,30.6,41029,644,41880,0.0153772683858644,18902,5,18957,0.000263754813525347,3.0492004402392E-096,7,7,"Artifact (7)"]
["UPN_Te4_007",20,31024033,"T","C","ASXL1","ENST00000375687","missense_variant","tTg/tCg|p.Leu1173Ser/c.3518T>C",57488,4217,61921,0.0681029053,0,1,0,0,1,1,0,0,3,"NO","NO","COSM4385129","haematopoietic_and_lymphoid_tissue",1,"NO","NO","NO",8.236E-006,"NO","NO",-0.013,"Tolerated",33.51,31.69,21377,70,21588,0.0032425422,36111,4147,40333,0.1028190316,2,26,26,"Artifact (11)"]
["UPN_Te4_016",20,31024033,"T","C","ASXL1","ENST00000375687","missense_variant","tTg/tCg|p.Leu1173Ser/c.3518T>C",41746,1315,43216,0.030428545,0,0,0,0,1,1,0,0,2,"NO","NO","COSM4385129","haematopoietic_and_lymphoid_tissue",1,"NO","NO","NO",8.236E-006,"NO","NO",-0.013,"Tolerated",32.98,31.47,14610,47,14761,0.0031840661,27136,1268,28455,0.0445615885,2,26,26,"Artifact (11)"]
["UPN_Te4_005",20,31024615,"T","G","ASXL1","ENST00000375687","missense_variant","gTc/gGc|p.Val1367Gly/c.4100T>G",20949,214,21307,0.0100436476275402,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.751,"Deleterious",31.93,29.61,10668,188,10961,0.017151719733601,10281,26,10346,0.0025130485211676,4.59213138283674E-030,12,12,"Artifact (8)"]
["UPN_Te4_006",20,31024615,"T","G","ASXL1","ENST00000375687","missense_variant","gTc/gGc|p.Val1367Gly/c.4100T>G",21498,246,21887,0.0112395485904875,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.751,"Deleterious",31.87,29.74,10694,221,11019,0.0200562664488611,10804,25,10868,0.00230033124769967,1.17063837861991E-040,12,12,"Artifact (7)"]
["UPN_Te4_006",20,31024635,"G","GT","ASXL1","ENST00000375687","frameshift_variant","gtg/gtTg|p.Pro1377fs/c.4121dupT",21875,978,21935,0.0445862776384773,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.22,"NA",11029,978,11053,0.0884827648602189,10846,0,10882,0,2,21,21,"Artifact (6)"]
["UPN_Te4_016",20,31024635,"G","GT","ASXL1","ENST00000375687","frameshift_variant","gtg/gtTg|p.Pro1377fs/c.4121dupT",20620,1021,20739,0.0492309175948696,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.09,"NA",10378,1018,10431,0.0975937110535903,10242,3,10308,0.000291036088474971,2,21,21,"Artifact (6)"]
["UPN_Te4_013",20,31024636,"TG","T","ASXL1","ENST00000375687","frameshift_variant","ggt/|p.Gly1376fs/c.4127delG",7053,85,7302,0.0116406463982471,0,0,0,0,0,0,0,1,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.95,"NA",3933,45,4138,0.0108748187530208,3120,40,3164,0.0126422250316056,2,12,12,"Artifact (9)"]
["UPN_Te4_006",20,31025007,"A","G","ASXL1","ENST00000375687","missense_variant","Acg/Gcg|p.Thr1498Ala/c.4492A>G",23150,896,24172,0.0370676816150918,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO",1.647E-005,"NO","NO",-0.22,"Tolerated",34.3,31.72,3870,849,4729,0.179530556142948,19280,47,19443,0.0024173224296662,0,30,30,"Artifact (5)"]
["UPN_Te4_017",20,31025007,"A","G","ASXL1","ENST00000375687","missense_variant","Acg/Gcg|p.Thr1498Ala/c.4492A>G",11835,140,12016,0.0116511318242344,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO",1.647E-005,"NO","NO",-0.22,"Tolerated",34.47,31.48,1971,114,2096,0.0543893129770992,9864,26,9920,0.00262096774193548,2.54690905737968E-062,30,30,"Artifact (4)"]
["UPN_Te4_006",20,31025059,"T","C","ASXL1","ENST00000375687","missense_variant","aTg/aCg|p.Met1515Thr/c.4544T>C",20599,3444,24089,0.142969820249907,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.593,"Deleterious",32.6,31.38,4758,5,4770,0.0010482180293501,15841,3439,19319,0.178011284227962,2,22,22,"Artifact (3)"]
["UPN_Te4_015",20,31025059,"T","C","ASXL1","ENST00000375687","missense_variant","aTg/aCg|p.Met1515Thr/c.4544T>C",16960,1397,18392,0.0759569377990431,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.593,"Deleterious",32.15,31.3,2072,7,2088,0.00335249042145594,14888,1390,16304,0.0852551521099117,2,22,22,"Artifact (4)"]
["UPN_Te4_016",20,31025059,"T","C","ASXL1","ENST00000375687","missense_variant","aTg/aCg|p.Met1515Thr/c.4544T>C",20991,1358,22414,0.0605871330418488,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.593,"Deleterious",32.34,31.45,3895,11,3927,0.00280112044817927,17096,1347,18487,0.0728620111429653,2,22,22,"Artifact (4)"]
["UPN_Te4_006",20,57484620,"T","C","GNAS","ENST00000477931","non_coding_exon_variant","|n.819T>C",28570,2427,31289,0.0775671961392183,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",32.41,31.68,17899,45,18210,0.00247116968698517,10671,2382,13079,0.182124015597523,2,24,24,"Artifact (5)"]
["UPN_Te4_012",20,57484620,"T","C","GNAS","ENST00000477931","non_coding_exon_variant","|n.819T>C",14491,304,14858,0.020460358056266,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",32.78,31.83,9275,17,9344,0.00181934931506849,5216,287,5514,0.0520493289807762,2,24,24,"Artifact (5)"]
["UPN_Te4_021",20,57484620,"T","C","GNAS","ENST00000477931","non_coding_exon_variant","|n.819T>C",25759,414,26299,0.0157420434237043,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",32.93,31.88,18178,46,18341,0.00250804209148901,7581,368,7958,0.046242774566474,2,24,24,"Artifact (7)"]
["UPN_Te4_008",21,36164526,"C","G","RUNX1","ENST00000437180","missense_variant","aGc/aCc|p.Ser450Thr/c.1349G>C",13655,193,13875,0.0139099099099099,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.208,"Tolerated",34.04,31.23,4522,188,4730,0.0397463002114165,9133,5,9145,0.000546746856205577,2.07331002867959E-081,7,7,"Artifact (8)"]
["UPN_Te4_011",21,36164557,"CG","C","RUNX1","ENST00000437180","frameshift_variant","tcc/|p.Ala440fs/c.1316delC",11134,131,11324,0.0115683504062169,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.07,"NA",4634,2,4667,0.000428540818512963,6500,129,6657,0.0193780982424516,2,5,5,"Artifact (6)"]
["UPN_Te4_001",21,36164578,"T","C","RUNX1","ENST00000437180","missense_variant","Acc/Gcc|p.Thr433Ala/c.1297A>G",8423,367,8814,0.0416383027002496,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.338,"Deleterious",32.16,31.77,3170,21,3199,0.00656455142231947,5253,346,5615,0.0616206589492431,2,24,24,"Artifact (4)"]
["UPN_Te4_016",21,36164578,"T","C","RUNX1","ENST00000437180","missense_variant","Acc/Gcc|p.Thr433Ala/c.1297A>G",7239,450,7704,0.058411214953271,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.338,"Deleterious",32.13,31.8,2567,19,2594,0.00732459521973786,4672,431,5110,0.0843444227005871,2,24,24,"Artifact (4)"]
["UPN_Te4_017",21,36164578,"T","C","RUNX1","ENST00000437180","missense_variant","Acc/Gcc|p.Thr433Ala/c.1297A>G",2550,74,2627,0.028169014084507,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.338,"Deleterious",33.35,32.22,1288,4,1295,0.00308880308880309,1262,70,1332,0.0525525525525526,2,24,24,"Artifact (4)"]
["UPN_Te4_022",21,36164605,"A","G","RUNX1","ENST00000437180","missense_variant","Tcg/Ccg|p.Ser424Pro/c.1270T>C",1209,96,1991,0.048216976393772,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.784,"Deleterious",15.6,15.38,1207,96,1989,0.0482654600301659,2,0,2,0,1,3,3,"Artifact (1)"]
["UPN_Te4_002",21,36164619,"A","C","RUNX1","ENST00000437180","missense_variant","gTg/gGg|p.Val419Gly/c.1256T>G",494,780,1276,0.61128526645768,0,0,1,1,0,0,1,0,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.292,"Deleterious",16.53,15.16,494,780,1276,0.61128526645768,0,0,0,"NA",1,32,32,"Artifact (4)"]
["UPN_Te4_014",21,36164619,"A","C","RUNX1","ENST00000437180","missense_variant","gTg/gGg|p.Val419Gly/c.1256T>G",646,1063,1715,0.619825072886297,0,0,1,1,0,0,1,0,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.292,"Deleterious",17.67,16.21,641,1063,1710,0.621637426900585,5,0,5,0,0.00764288351624743,32,32,"Artifact (4)"]
["UPN_Te4_021",21,36164619,"A","C","RUNX1","ENST00000437180","missense_variant","gTg/gGg|p.Val419Gly/c.1256T>G",1572,1521,3104,0.490012886597938,0,0,1,1,0,0,1,0,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.292,"Deleterious",15.46,15.36,1569,1521,3101,0.490486939696872,3,0,3,0,0.249961416025587,32,32,"Artifact (4)"]
["UPN_Te4_010",21,36206763,"C","T","RUNX1","ENST00000437180","missense_variant","cGt/cAt|p.Arg250His/c.749G>A",5378,63,5568,0.0113146551724138,0,0,0,0,1,0,0,1,2,"NO","NO","COSM24764","haematopoietic_and_lymphoid_tissue",1,"NO","NO","NO",4.942E-005,"NO","NO",-3.312,"Deleterious",28.53,29.13,3299,45,3347,0.0134448760083657,2079,18,2221,0.00810445745159838,0.118118164025028,1,1,"Artifact (1)"]
["UPN_Te4_006",21,36206851,"A","G","RUNX1","ENST00000437180","missense_variant","Ttt/Ctt|p.Phe221Leu/c.661T>C",12704,2176,14951,0.145542104207076,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-4.334,"Deleterious",32.45,31.19,9458,2156,11647,0.185112046020434,3246,20,3304,0.00605326876513317,1.31564930295462E-217,22,22,"Artifact (4)"]
["UPN_Te4_015",21,36206851,"A","G","RUNX1","ENST00000437180","missense_variant","Ttt/Ctt|p.Phe221Leu/c.661T>C",12801,832,13675,0.0608409506398538,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-4.334,"Deleterious",32.21,31.37,9651,808,10479,0.0771065941406623,3150,24,3196,0.00750938673341677,4.03400318861234E-065,22,22,"Artifact (5)"]
["UPN_Te4_018",21,36206851,"A","G","RUNX1","ENST00000437180","missense_variant","Ttt/Ctt|p.Phe221Leu/c.661T>C",18694,1391,20172,0.0689569700575055,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-4.334,"Deleterious",32.2,31.34,14213,1353,15608,0.0866863147104049,4481,38,4564,0.00832602979842244,2.31477167255988E-105,22,22,"Artifact (5)"]
["UPN_Te4_018",21,36231870,"T","C","RUNX1","ENST00000437180","missense_variant","Agc/Ggc|p.Ser172Gly/c.514A>G",31261,372,31836,0.0116848850358085,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.71,"Deleterious",30.35,32.09,15795,176,16054,0.0109629998754205,15466,196,15782,0.0124192117602332,0.230322847248609,4,4,"Artifact (1)"]
["UPN_Te4_010",21,36259316,"C","G","RUNX1","ENST00000437180","missense_variant","Ggc/Cgc|p.Gly59Arg/c.175G>C",5752,83,5855,0.0141759180187874,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.262,"Deleterious",34.74,30.82,679,82,763,0.107470511140236,5073,1,5092,0.000196386488609584,4.02691882638537E-073,7,7,"Artifact (6)"]
["UPN_Te4_008",21,36259363,"G","C","RUNX1","ENST00000437180","missense_variant","cCt/cGt|p.Pro43Arg/c.128C>G",9990,290,10304,0.0281444099378882,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-6.741,"Deleterious",32.04,31.6,782,1,786,0.00127226463104326,9208,289,9518,0.0303635217482664,2,14,14,"Artifact (4)"]
["UPN_Te4_010",21,36265248,"C","T","RUNX1","ENST00000437180","missense_variant","gGa/gAa|p.Gly24Glu/c.71G>A",11391,150,12015,0.0124843945068664,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.342,"Tolerated",26.91,22.49,6940,47,7056,0.0066609977324263,4451,103,4959,0.0207703165960879,3.86977719109102E-013,1,1,"Artifact (5)"]
["UPN_Te4_016","X",15821841,"A","T","ZRSR2","ENST00000307771","missense_variant","agA/agT|p.Arg78Ser/c.234A>T",2739,35,2777,0.0126035289881167,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.066,"Tolerated",35.5,36,2739,35,2777,0.0126035289881167,0,0,0,"NA",1,1,1,"Artifact (1)"]
["UPN_Te4_013","X",15821854,"C","T","ZRSR2","ENST00000307771","stop_gained","Caa/Taa|p.Gln83*/c.247C>T",1640,20,1661,0.0120409391932571,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",31.97,33.4,832,10,842,0.0118764845605701,808,10,819,0.0122100122100122,1,1,1,"Artifact (3)"]
["UPN_Te4_011","X",15821906,"A","T","ZRSR2","ENST00000307771","missense_variant","cAa/cTa|p.Gln100Leu/c.299A>T",3537,52,3612,0.0143964562569214,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.208,"Tolerated",33.81,27.19,1789,20,1820,0.010989010989011,1748,32,1792,0.0178571428571429,0.0938270859170225,1,1,"Artifact (1)"]
["UPN_Te4_009","X",15822305,"G","T","ZRSR2","ENST00000307771","missense_variant","gaG/gaT|p.Glu128Asp/c.384G>T",1806,22,1830,0.0120218579234973,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.532,"Tolerated",35.21,34.14,1806,22,1830,0.0120218579234973,0,0,0,"NA",1,1,1,"Artifact (1)"]
["UPN_Te4_007","X",15833956,"C","G","ZRSR2","ENST00000307771","missense_variant","gaC/gaG|p.Asp238Glu/c.714C>G",23517,346,23928,0.0144600468070879,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.475,"Tolerated",33.25,30.52,10873,329,11227,0.0293043555713904,12644,17,12701,0.00133847728525313,6.57310546206954E-086,9,9,"Artifact (6)"]
["UPN_Te4_004","X",15841096,"G","C","ZRSR2","ENST00000307771","missense_variant","Gaa/Caa|p.Glu394Gln/c.1180G>C",15676,1243,17008,0.0730832549388523,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.197,"Tolerated",32.19,31.53,2259,1,2263,0.000441891294741494,13417,1242,14745,0.0842319430315361,2,16,16,"Artifact (7)"]
["UPN_Te4_018","X",15841096,"G","C","ZRSR2","ENST00000307771","missense_variant","Gaa/Caa|p.Glu394Gln/c.1180G>C",20853,514,21430,0.0239850676621559,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.197,"Tolerated",32.22,31.27,4528,10,4557,0.0021944261575598,16325,504,16873,0.0298702068393291,2,16,16,"Artifact (6)"]
["UPN_Te4_007","X",15841097,"A","G","ZRSR2","ENST00000307771","missense_variant","gAa/gGa|p.Glu394Gly/c.1181A>G",1577,26,1609,0.0161591050341827,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.371,"Tolerated",34.59,31.31,1577,1,1580,0.000632911392405063,0,25,29,0.862068965517241,3.66417374784896E-054,17,17,"Artifact (10)"]
["UPN_Te4_021","X",15841097,"A","G","ZRSR2","ENST00000307771","missense_variant","gAa/gGa|p.Glu394Gly/c.1181A>G",3449,46,3503,0.0131316014844419,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.371,"Tolerated",34.78,31.3,3449,14,3471,0.00403341976375684,0,32,32,1,2.96258870880459E-067,17,17,"Artifact (6)"]
["UPN_Te4_006","X",15841283,"A","C","ZRSR2","ENST00000307771","missense_variant","cAa/cCa|p.Gln456Pro/c.1367A>C",12942,146,13162,0.0110925391277921,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.153,"Tolerated",35.59,35.17,8378,73,8497,0.00859126750617865,4564,73,4665,0.0156484458735263,2,4,4,"Artifact (5)"]
["UPN_Te4_014","X",39911627,"T","C","BCOR","ENST00000378444","missense_variant","gAt/gGt|p.Asp1668Gly/c.5003A>G",3524,37,3576,0.0103467561521253,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.368,"Deleterious",34.11,34.27,1740,18,1769,0.0101752402487281,1784,19,1807,0.0105146651909242,1,1,1,"Artifact (0)"]
["UPN_Te4_010","X",39913178,"AG","A","BCOR","ENST00000378444","frameshift_variant","acc/|p.Leu1646fs/c.4931delC",13123,138,13368,0.0103231597845601,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.14,"NA",13123,138,13368,0.0103231597845601,0,0,0,"NA",1,3,4,"Artifact (5)"]
["UPN_Te4_021","X",39913252,"TG","T","BCOR","ENST00000378444","frameshift_variant","aac/|p.Pro1621fs/c.4857delC",17461,194,17724,0.0109456104716768,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",32.86,"NA",8770,96,8896,0.0107913669064748,8691,98,8828,0.0111010421386498,0.885247594739275,7,7,"Artifact (6)"]
["UPN_Te4_005","X",39916507,"C","T","BCOR","ENST00000378444","missense_variant","tGc/tAc|p.Cys1499Tyr/c.4496G>A",4044,50,4104,0.0121832358674464,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.896,"Deleterious",33.21,32.26,2045,24,2069,0.0115998066698888,1999,26,2035,0.0127764127764128,0.776729973259638,1,1,"Artifact (0)"]
["UPN_Te4_001","X",39916564,"A","G","BCOR","ENST00000378444","missense_variant","cTg/cCg|p.Leu1480Pro/c.4439T>C",1785,22,1825,0.0120547945205479,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.683,"Deleterious",33.89,35.41,0,0,0,"NA",1785,22,1825,0.0120547945205479,1,1,1,"Artifact (2)"]
["UPN_Te4_007","X",39921634,"T","C","BCOR","ENST00000378444","missense_variant","Aga/Gga|p.Arg1396Gly/c.4186A>G",3789,586,4392,0.133424408014572,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.145,"Tolerated",32.82,31.44,1351,9,1368,0.00657894736842105,2438,577,3024,0.190806878306878,2,23,23,"Artifact (4)"]
["UPN_Te4_018","X",39921634,"T","C","BCOR","ENST00000378444","missense_variant","Aga/Gga|p.Arg1396Gly/c.4186A>G",10126,595,10762,0.0552871213529084,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.145,"Tolerated",32.68,31.53,3694,12,3721,0.00322493953238377,6432,583,7041,0.0828007385314586,2,23,23,"Artifact (5)"]
["UPN_Te4_019","X",39922093,"T","C","BCOR","ENST00000378444","missense_variant","aAg/aGg|p.Lys1360Arg/c.4079A>G",3149,32,3185,0.0100470957613815,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.981,"Tolerated",33.02,31.69,1578,16,1596,0.0100250626566416,1571,16,1589,0.0100692259282568,1,1,1,"Artifact (4)"]
["UPN_Te4_010","X",39922867,"C","T","BCOR","ENST00000378444","missense_variant","Gaa/Aaa|p.Glu1281Lys/c.3841G>A",2373,47,2423,0.0193974411886092,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.837,"Tolerated",35.2,35.45,2373,47,2423,0.0193974411886092,0,0,0,"NA",1,1,1,"Artifact (2)"]
["UPN_Te4_010","X",39922875,"C","T","BCOR","ENST00000378444","missense_variant","aGt/aAt|p.Ser1278Asn/c.3833G>A",2386,35,2423,0.0144449030127941,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.107,"Tolerated",35.33,34.74,2386,35,2423,0.0144449030127941,0,0,0,"NA",1,1,1,"Artifact (2)"]
["UPN_Te4_002","X",39923041,"A","G","BCOR","ENST00000378444","missense_variant","Tcg/Ccg|p.Ser1223Pro/c.3667T>C",16331,2661,19066,0.13956781705654,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.806,"Tolerated",32.39,31.53,11338,2651,14039,0.18883111332716,4993,10,5027,0.00198925800676348,0,22,22,"Artifact (5)"]
["UPN_Te4_012","X",39923041,"A","G","BCOR","ENST00000378444","missense_variant","Tcg/Ccg|p.Ser1223Pro/c.3667T>C",7109,355,7483,0.0474408659628491,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.806,"Tolerated",32.38,31.73,5240,355,5609,0.0632911392405063,1869,0,1874,0,3.24545990051435E-046,22,22,"Artifact (8)"]
["UPN_Te4_021","X",39923041,"A","G","BCOR","ENST00000378444","missense_variant","Tcg/Ccg|p.Ser1223Pro/c.3667T>C",11003,409,11453,0.0357111673797258,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.806,"Tolerated",32.53,31.59,7955,406,8395,0.0483621203097082,3048,3,3058,0.000981033355134075,4.56041735362905E-051,22,22,"Artifact (7)"]
["UPN_Te4_020","X",39923052,"T","G","BCOR","ENST00000378444","missense_variant","gAg/gCg|p.Glu1219Ala/c.3656A>C",5054,71,5151,0.0137837313143079,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.016,"Tolerated",35.62,35.68,3704,71,3796,0.0187038988408851,1350,0,1355,0,2,7,7,"Artifact (5)"]
["UPN_Te4_009","X",39923091,"T","C","BCOR","ENST00000378444","missense_variant","aAa/aGa|p.Lys1206Arg/c.3617A>G",8582,551,9153,0.0601988419097564,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.626,"Tolerated",34.48,31.61,6661,19,6698,0.00283666766198865,1921,532,2455,0.216700610997963,2,30,30,"Artifact (5)"]
["UPN_Te4_020","X",39923091,"T","C","BCOR","ENST00000378444","missense_variant","aAa/aGa|p.Lys1206Arg/c.3617A>G",5023,91,5119,0.017776909552647,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.626,"Tolerated",34.58,32.21,3772,12,3786,0.00316957210776545,1251,79,1333,0.059264816204051,2,30,30,"Artifact (7)"]
["UPN_Te4_008","X",39923771,"A","G","BCOR","ENST00000378444","missense_variant","gTg/gCg|p.Val1107Ala/c.3320T>C",26244,2216,28578,0.0775421653019805,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.096,"Tolerated",33.81,31.49,9125,2170,11327,0.191577646331774,17119,46,17251,0.00266651208625587,0,28,28,"Artifact (7)"]
["UPN_Te4_009","X",39923771,"A","G","BCOR","ENST00000378444","missense_variant","gTg/gCg|p.Val1107Ala/c.3320T>C",9796,1006,10844,0.0927701954998156,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.096,"Tolerated",33.68,31.47,3729,992,4726,0.209902666102412,6067,14,6118,0.0022883295194508,0,28,28,"Artifact (7)"]
["UPN_Te4_018","X",39923771,"A","G","BCOR","ENST00000378444","missense_variant","gTg/gCg|p.Val1107Ala/c.3320T>C",25599,900,26681,0.0337318691203478,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.096,"Tolerated",33.59,31.39,8623,827,9471,0.0873191848801605,16976,73,17210,0.0042417199302731,7.57323481216864E-286,28,28,"Artifact (7)"]
["UPN_Te4_002","X",39923850,"C","G","BCOR","ENST00000378444","missense_variant","Gag/Cag|p.Glu1081Gln/c.3241G>C",10359,105,10485,0.0100143061516452,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.491,"Tolerated",34.96,35.1,10332,54,10407,0.00518881522052465,27,51,78,0.653846153846154,3.05917635181564E-088,1,1,"Artifact (5)"]
["UPN_Te4_005","X",39931649,"GT","G","BCOR","ENST00000378444","frameshift_variant","gaa/|p.Glu983fs/c.2948delA",33597,376,34144,0.0110121836925961,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.1,"NA",23823,376,24321,0.0154598906294971,9774,0,9823,0,2,20,20,"Artifact (9)"]
["UPN_Te4_015","X",39931649,"GT","G","BCOR","ENST00000378444","frameshift_variant","gaa/|p.Glu983fs/c.2948delA",23691,262,24153,0.0108475137664058,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.91,"NA",17851,261,18275,0.014281805745554,5840,1,5878,0.000170125893160939,2,20,20,"Artifact (9)"]
["UPN_Te4_010","X",39931846,"T","TG","BCOR","ENST00000378444","frameshift_variant","acc/acCc|p.Gln918fs/c.2750dupC",14576,209,14622,0.014293530296813,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.74,"NA",240,0,240,0,14336,209,14382,0.0145320539563343,2,8,8,"Artifact (5)"]
["UPN_Te4_008","X",39931854,"AC","A","BCOR","ENST00000378444","frameshift_variant","ggt/|p.Gly915fs/c.2744delG",31181,736,31964,0.0230259041421599,1,0,0,0,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.56,"NA",431,1,432,0.00231481481481481,30750,735,31532,0.0233096536851452,2,44,44,"Artifact (6)"]
["UPN_Te4_017","X",39931854,"AC","A","BCOR","ENST00000378444","frameshift_variant","ggt/|p.Gly915fs/c.2743delG",9261,479,9754,0.04910805823252,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.67,"NA",203,1,204,0.00490196078431373,9058,478,9550,0.0500523560209424,2,44,44,"Artifact (6)"]
["UPN_Te4_018","X",39931854,"AC","A","BCOR","ENST00000378444","frameshift_variant","ggt/|p.Gly915fs/c.2743delG",23984,1076,25154,0.0427764967798362,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.46,"NA",480,0,480,0,23504,1076,24674,0.0436086568857907,2,44,44,"Artifact (6)"]
["UPN_Te4_003","X",39931928,"T","G","BCOR","ENST00000378444","missense_variant","Aac/Cac|p.Asn891His/c.2671A>C",8230,115,8436,0.0136320531057373,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.7,"Tolerated",31.54,31.12,7965,114,8169,0.0139551964744767,265,1,267,0.00374531835205993,0.274279771584045,4,5,"Artifact (6)"]
["UPN_Te4_008","X",39932084,"TG","T","BCOR","ENST00000378444","frameshift_variant","ccc/|p.Lys839fs/c.2509delC",13338,167,13544,0.0123301831069108,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.84,"NA",0,0,0,"NA",13338,167,13544,0.0123301831069108,1,22,22,"Artifact (9)"]
["UPN_Te4_017","X",39932084,"TG","T","BCOR","ENST00000378444","frameshift_variant","ccc/|p.Lys839fs/c.2509delC",7703,106,7834,0.0135307633392903,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.87,"NA",0,0,0,"NA",7703,106,7834,0.0135307633392903,1,22,22,"Artifact (9)"]
["UPN_Te4_003","X",39932314,"T","C","BCOR","ENST00000378444","missense_variant","aAt/aGt|p.Asn762Ser/c.2285A>G",40714,1967,42881,0.0458711317366666,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.49,"Tolerated",32.91,31.73,15950,47,16130,0.00291382517048977,24764,1920,26751,0.0717730178311091,2,30,30,"Artifact (6)"]
["UPN_Te4_012","X",39932314,"T","C","BCOR","ENST00000378444","missense_variant","aAt/aGt|p.Asn762Ser/c.2285A>G",22046,346,22454,0.0154092811971141,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.49,"Tolerated",32.75,31.64,8216,24,8270,0.00290205562273277,13830,322,14184,0.0227016356457981,2,30,30,"Artifact (8)"]
["UPN_Te4_020","X",39932314,"T","C","BCOR","ENST00000378444","missense_variant","aAt/aGt|p.Asn762Ser/c.2285A>G",15437,240,15716,0.015271061338763,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.49,"Tolerated",32.68,31.61,5732,11,5763,0.00190872809300711,9705,229,9953,0.0230081382497739,2,30,30,"Artifact (8)"]
["UPN_Te4_007","X",39933149,"TC","T","BCOR","ENST00000378444","frameshift_variant","ccg/|p.Glu485fs/c.1449delG",24589,1316,26921,0.0488837710337655,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.27,"NA",9840,1,9884,0.000101173613921489,14749,1315,17037,0.0771849504020661,2,22,22,"Artifact (6)"]
["UPN_Te4_008","X",39933149,"TC","T","BCOR","ENST00000378444","frameshift_variant","ccg/|p.Glu485fs/c.1449delG",55941,3075,62382,0.0492930653073002,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.33,"NA",19515,1,19589,5.10490581448772E-005,36426,3074,42793,0.0718341784871357,2,22,22,"Artifact (6)"]
["UPN_Te4_017","X",39933149,"TC","T","BCOR","ENST00000378444","frameshift_variant","ccg/|p.Glu485fs/c.1449delG",17451,1287,19464,0.0661220715166461,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.34,"NA",7611,0,7651,0,9840,1287,11813,0.108947769406586,2,22,22,"Artifact (5)"]
["UPN_Te4_005","X",39933392,"C","G","BCOR","ENST00000378444","missense_variant","Gcc/Ccc|p.Ala403Pro/c.1207G>C",56737,1095,57949,0.0188959257277951,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.152,"Tolerated",32.72,31.06,36865,1078,38021,0.0283527524262907,19872,17,19928,0.000853071055800883,9.47684908920416E-171,9,9,"Artifact (6)"]
["UPN_Te4_001","X",39933452,"AC","A","BCOR","ENST00000378444","frameshift_variant","gag/|p.Glu382fs/c.1146delG",18192,198,18469,0.0107206670637284,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.12,"NA",8590,0,8628,0,9602,198,9841,0.0201199065135657,2,7,7,"Artifact (6)"]
["UPN_Te4_001","X",39933593,"AG","A","BCOR","ENST00000378444","frameshift_variant","ccc/|p.Ser336fs/c.1000delC",16489,187,16763,0.0111555210881107,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.83,"NA",7978,102,8122,0.0125584831322334,8511,85,8641,0.00983682444161555,0.105312736571798,22,22,"Artifact (9)"]
["UPN_Te4_020","X",39933593,"AG","A","BCOR","ENST00000378444","frameshift_variant","ccc/|p.Ser336fs/c.1000delC",10465,125,10636,0.0117525385483264,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.86,"NA",4693,66,4779,0.0138104205900816,5772,59,5857,0.0100734164247908,0.0854724501694217,22,22,"Artifact (9)"]
["UPN_Te4_004","X",39933865,"A","T","BCOR","ENST00000378444","missense_variant","cTc/cAc|p.Leu245His/c.734T>A",537,56,595,0.0941176470588235,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.356,"Tolerated",35.1,32,18,56,74,0.756756756756757,519,0,521,0,3.86300120210411E-063,6,6,"Artifact (5)"]
["UPN_Te4_007","X",39934042,"T","G","BCOR","ENST00000378444","missense_variant","tAt/tCt|p.Tyr186Ser/c.557A>C",16563,282,16956,0.0166312809624912,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.625,"Deleterious",33.46,31.7,7255,282,7610,0.0370565045992116,9308,0,9346,0,1.66111648807672E-100,14,14,"Artifact (10)"]
["UPN_Te4_008","X",39934042,"T","G","BCOR","ENST00000378444","missense_variant","tAt/tCt|p.Tyr186Ser/c.557A>C",40727,661,41755,0.0158304394683271,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.625,"Deleterious",33.64,31.65,15297,660,16240,0.0406403940886699,25430,1,25515,3.91926317852244E-005,5.23468569838202E-275,14,14,"Artifact (9)"]
["UPN_Te4_001","X",39934093,"T","C","BCOR","ENST00000378444","missense_variant","gAc/gGc|p.Asp169Gly/c.506A>G",11948,421,12439,0.0338451644022831,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.009,"Deleterious",32.91,31.41,6897,23,6965,0.00330222541277818,5051,398,5474,0.0727073438070881,2,24,24,"Artifact (4)"]
["UPN_Te4_012","X",39934093,"T","C","BCOR","ENST00000378444","missense_variant","gAc/gGc|p.Asp169Gly/c.506A>G",10779,288,11101,0.0259436086839024,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.009,"Deleterious",33.77,31.95,6548,29,6595,0.0043972706595906,4231,259,4506,0.0574789169995561,2,24,24,"Artifact (4)"]
["UPN_Te4_021","X",39934093,"T","C","BCOR","ENST00000378444","missense_variant","gAc/gGc|p.Asp169Gly/c.506A>G",16840,454,17331,0.0261958340545843,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.009,"Deleterious",33.41,31.26,8895,27,8939,0.00302047208860051,7945,427,8392,0.0508817921830315,2,24,24,"Artifact (4)"]
["UPN_Te4_012","X",39934235,"T","C","BCOR","ENST00000378444","missense_variant","Atg/Gtg|p.Met122Val/c.364A>G",12845,162,13031,0.0124318931778068,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO",8.237E-006,"NO","NO",-0.541,"Tolerated",35.59,35.73,6187,131,6335,0.0206787687450671,6658,31,6696,0.00462962962962963,2,18,18,"Artifact (3)"]
["UPN_Te4_010","X",39934406,"C","T","BCOR","ENST00000378444","missense_variant","Gat/Aat|p.Asp65Asn/c.193G>A",6322,65,6402,0.0101530771633864,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.27,"Tolerated",34.76,35.4,0,0,0,"NA",6322,65,6402,0.0101530771633864,1,1,1,"Artifact (2)"]
["UPN_Te4_003","X",39937163,"AG","A","BCOR","ENST00000378444","frameshift_variant","acc/|p.Leu7fs/c.14delC",2361,28,2402,0.0116569525395504,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.88,"NA",2361,28,2402,0.0116569525395504,0,0,0,"NA",1,4,4,"Artifact (6)"]
["UPN_Te4_012","X",44732865,"A","G","KDM6A","ENST00000377967","missense_variant","aAg/aGg|p.Lys23Arg/c.68A>G",4718,56,4779,0.0117179326218874,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.998,"Tolerated",32.6,33.05,2372,28,2400,0.0116666666666667,2346,28,2379,0.0117696511139134,1,9,9,"Artifact (3)"]
["UPN_Te4_013","X",44732865,"A","G","KDM6A","ENST00000377967","missense_variant","aAg/aGg|p.Lys23Arg/c.68A>G",1370,24,1405,0.0170818505338078,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.998,"Tolerated",30.72,32.5,698,12,712,0.0168539325842697,672,12,693,0.0173160173160173,1,9,9,"Artifact (3)"]
["UPN_Te4_008","X",44820553,"A","G","KDM6A","ENST00000377967","missense_variant","Atc/Gtc|p.Ile84Val/c.250A>G",1943,20,1966,0.0101729399796541,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.689,"Tolerated",35.04,33.8,1943,20,1966,0.0101729399796541,0,0,0,"NA",1,1,1,"Artifact (2)"]
["UPN_Te4_004","X",44913166,"C","G","KDM6A","ENST00000377967","missense_variant","Cct/Gct|p.Pro281Ala/c.841C>G",19455,712,20212,0.0352265980605581,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-6.866,"Deleterious",33.49,31.59,9732,709,10473,0.0676978898118973,9723,3,9739,0.000308039839819283,1.09165615034877E-201,15,15,"Artifact (6)"]
["UPN_Te4_011","X",44913166,"C","G","KDM6A","ENST00000377967","missense_variant","Cct/Gct|p.Pro281Ala/c.841C>G",13698,238,13961,0.0170474894348542,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-6.866,"Deleterious",33.23,31.16,6701,233,6948,0.0335348301669545,6997,5,7013,0.000712961642663625,8.22551271783856E-064,15,15,"Artifact (9)"]
["UPN_Te4_008","X",44922836,"C","T","KDM6A","ENST00000377967","missense_variant","cCt/cTt|p.Pro566Leu/c.1697C>T",2180,24,2207,0.0108744902582691,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",0.514,"Tolerated",35.01,34.42,13,2,15,0.133333333333333,2167,22,2192,0.010036496350365,0.0109467937795144,1,1,"Artifact (2)"]
["UPN_Te4_012","X",44928909,"A","G","KDM6A","ENST00000377967","missense_variant","cAg/cGg|p.Gln670Arg/c.2009A>G",3879,50,3946,0.0126710593005575,0,0,0,1,1,0,0,1,3,"NO","NO","COSM5494275, COSM5494276","Something is odd...",0,"NO","NO","NO","NO","NO","NO",-2.301,"Tolerated",35.3,32.08,12,36,55,0.654545454545455,3867,14,3891,0.00359804677460807,1.10434858038992E-065,17,17,"Artifact (4)"]
["UPN_Te4_002","X",44928911,"G","A","KDM6A","ENST00000377967","missense_variant","Gca/Aca|p.Ala671Thr/c.2011G>A",20819,322,21193,0.0151936960317086,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.781,"Tolerated",32.5,29.85,14024,319,14386,0.0221743361601557,6795,3,6807,0.000440722785368004,2,10,10,"Artifact (4)"]
["UPN_Te4_018","X",44928911,"G","A","KDM6A","ENST00000377967","missense_variant","Gca/Aca|p.Ala671Thr/c.2011G>A",20058,214,20327,0.0105278693363507,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.781,"Tolerated",32.34,28.5,12789,205,13032,0.0157305095150399,7269,9,7295,0.00123372172721042,2,10,10,"Artifact (5)"]
["UPN_Te4_015","X",44928963,"A","C","KDM6A","ENST00000377967","missense_variant","aAt/aCt|p.Asn688Thr/c.2063A>C",15301,161,15674,0.0102717876738548,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.733,"Deleterious",33.27,31.42,10437,0,10501,0,4864,161,5173,0.0311231393775372,2,12,15,"Artifact (8)"]
["UPN_Te4_019","X",44928963,"A","C","KDM6A","ENST00000377967","missense_variant","aAt/aCt|p.Asn688Thr/c.2063A>C",4030,43,4125,0.0104242424242424,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.733,"Deleterious",33.93,31.58,2811,0,2819,0,1219,43,1306,0.0329249617151608,2,12,15,"Artifact (8)"]
["UPN_Te4_006","X",44928965,"T","C","KDM6A","ENST00000377967","missense_variant","Tca/Cca|p.Ser689Pro/c.2065T>C",19703,1250,21070,0.0593260560037969,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.828,"Tolerated",33.76,31.61,13763,29,13893,0.00208738213488807,5940,1221,7177,0.170126793925038,2,28,28,"Artifact (5)"]
["UPN_Te4_015","X",44928965,"T","C","KDM6A","ENST00000377967","missense_variant","Tca/Cca|p.Ser689Pro/c.2065T>C",15069,398,15598,0.0255160918066419,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.828,"Tolerated",33.45,31.62,10337,35,10498,0.00333396837492856,4732,363,5100,0.0711764705882353,2,28,28,"Artifact (5)"]
["UPN_Te4_003","X",44929296,"A","G","KDM6A","ENST00000377967","missense_variant","aAa/aGa|p.Lys799Arg/c.2396A>G",30738,4551,35396,0.12857385015256,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO",-1.763,"Tolerated",33.04,31.45,18692,4517,23265,0.194154309047926,12046,34,12131,0.00280273679004204,0,23,23,"Artifact (4)"]
["UPN_Te4_009","X",44929296,"A","G","KDM6A","ENST00000377967","missense_variant","aAa/aGa|p.Lys799Arg/c.2396A>G",17263,3044,20352,0.149567610062893,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO",-1.763,"Tolerated",33.11,31.47,10350,3027,13403,0.225844960083563,6913,17,6949,0.00244639516477191,0,23,23,"Artifact (4)"]
["UPN_Te4_022","X",44929296,"A","G","KDM6A","ENST00000377967","missense_variant","aAa/aGa|p.Lys799Arg/c.2396A>G",15089,483,15593,0.0309754376964022,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO",-1.763,"Tolerated",33.52,31.65,7840,468,8319,0.0562567616300036,7249,15,7274,0.00206213912565301,1.13805511252278E-107,23,23,"Artifact (4)"]
["UPN_Te4_008","X",44938475,"C","G","KDM6A","ENST00000377967","missense_variant","gCa/gGa|p.Ala1008Gly/c.3023C>G",16822,595,17451,0.0340954673084637,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.471,"Tolerated",33.22,31.35,9440,595,10057,0.0591627721984687,7382,0,7394,0,1.96520963189476E-146,11,11,"Artifact (5)"]
["UPN_Te4_009","X",44938475,"C","G","KDM6A","ENST00000377967","missense_variant","gCa/gGa|p.Ala1008Gly/c.3023C>G",7378,179,7571,0.0236428477083609,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.471,"Tolerated",33.91,31.5,2661,176,2845,0.0618629173989455,4717,3,4726,0.000634786288616166,9.83319412326994E-072,11,11,"Artifact (4)"]
["UPN_Te4_001","X",44942019,"T","C","KDM6A","ENST00000377967","missense_variant","cTa/cCa|p.Leu1090Pro/c.3269T>C",9599,253,9919,0.0255066034882549,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-4.524,"Deleterious",33.56,31.61,6827,16,6902,0.00231816864676905,2772,237,3017,0.0785548558170368,2,25,25,"Artifact (4)"]
["UPN_Te4_015","X",44942019,"T","C","KDM6A","ENST00000377967","missense_variant","cTa/cCa|p.Leu1090Pro/c.3269T>C",12870,363,13306,0.0272809258980911,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-4.524,"Deleterious",33.49,31.62,9123,25,9214,0.00271326242674191,3747,338,4092,0.0826001955034213,2,25,25,"Artifact (4)"]
["UPN_Te4_020","X",44942019,"T","C","KDM6A","ENST00000377967","missense_variant","cTa/cCa|p.Leu1090Pro/c.3269T>C",5410,131,5562,0.0235526788924847,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-4.524,"Deleterious",33.5,31.79,2992,3,3009,0.000997008973080758,2418,128,2553,0.0501370936153545,2,25,25,"Artifact (4)"]
["UPN_Te4_010","X",44949124,"C","G","KDM6A","ENST00000377967","missense_variant","Cag/Gag|p.Gln1229Glu/c.3685C>G",10492,170,10681,0.0159161127235278,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.019,"Tolerated",34.17,31.32,2445,168,2621,0.064097672644029,8047,2,8060,0.000248138957816377,3.32957312113834E-101,7,7,"Artifact (7)"]
["UPN_Te4_010","X",48649598,"C","T","GATA1","ENST00000376670","missense_variant","Cca/Tca|p.Pro28Ser/c.82C>T",3245,40,3293,0.0121469784391133,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",0.383,"Tolerated",33.03,32.4,1634,20,1657,0.012070006035003,1611,20,1636,0.0122249388753056,1,1,1,"Artifact (2)"]
["UPN_Te4_004","X",48649692,"C","G","GATA1","ENST00000376670","missense_variant","gCa/gGa|p.Ala59Gly/c.176C>G",19881,1282,21215,0.0604289417864718,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.322,"Tolerated",32.15,31.55,17713,1280,19042,0.0672198298498057,2168,2,2173,0.00092038656235619,1.28725795371303E-058,17,17,"Artifact (9)"]
["UPN_Te4_015","X",48649692,"C","G","GATA1","ENST00000376670","missense_variant","gCa/gGa|p.Ala59Gly/c.176C>G",20028,442,20513,0.0215473114610247,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.322,"Tolerated",31.95,31.25,18340,441,18817,0.0234362544507626,1688,1,1696,0.000589622641509434,1.39725659682383E-015,17,17,"Artifact (9)"]
["UPN_Te4_016","X",48649692,"C","G","GATA1","ENST00000376670","missense_variant","gCa/gGa|p.Ala59Gly/c.176C>G",21096,385,21539,0.0178745531361716,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.322,"Tolerated",31.98,30.92,19125,383,19552,0.0195887888707038,1971,2,1987,0.00100654252642174,8.58444447263589E-014,17,17,"Artifact (11)"]
["UPN_Te4_015","X",53426521,"T","C","SMC1A","ENST00000322213","missense_variant","aAg/aGg|p.Lys851Arg/c.2552A>G",3582,48,3645,0.0131687242798354,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.406,"Tolerated",35.59,33.81,3582,48,3645,0.0131687242798354,0,0,0,"NA",1,8,8,"Artifact (4)"]
["UPN_Te4_013","X",53426599,"T","C","SMC1A","ENST00000322213","missense_variant","aAg/aGg|p.Lys825Arg/c.2474A>G",6473,84,6571,0.0127834423984173,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.43,"Tolerated",34.15,31.82,3268,42,3317,0.0126620440156768,3205,42,3254,0.0129071911493546,1,13,13,"Artifact (6)"]
["UPN_Te4_008","X",76778770,"T","C","ATRX","ENST00000373344","missense_variant","gAa/gGa|p.Glu2270Gly/c.6809A>G",4298,45,4362,0.0103163686382393,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.722,"Deleterious",34.68,33.29,4298,45,4362,0.0103163686382393,0,0,0,"NA",1,1,1,"Artifact (0)"]
["UPN_Te4_011","X",76812956,"T","C","ATRX","ENST00000373344","missense_variant","aAg/aGg|p.Lys2222Arg/c.6665A>G",9691,117,9831,0.011901129081477,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.187,"Tolerated",34.85,33.25,9691,117,9831,0.011901129081477,0,0,0,"NA",1,12,12,"Artifact (7)"]
["UPN_Te4_003","X",76813058,"C","G","ATRX","ENST00000373344","missense_variant","cGa/cCa|p.Arg2188Pro/c.6563G>C",21060,1231,22370,0.0550290567724631,0,0,0,0,1,1,0,0,2,"NO","NO","COSM1469434, COSM1469433","large_intestine",2,"NO","NO","NO","NO","NO","NO",-6.394,"Deleterious",33.39,31.64,10687,1227,11956,0.102626296420207,10373,4,10414,0.000384098329172268,0,16,16,"Artifact (4)"]
["UPN_Te4_013","X",76813058,"C","G","ATRX","ENST00000373344","missense_variant","cGa/cCa|p.Arg2188Pro/c.6563G>C",10424,227,10693,0.0212288412980455,0,0,0,0,1,0,0,0,1,"NO","NO","COSM1469434, COSM1469433","large_intestine",2,"NO","NO","NO","NO","NO","NO",-6.394,"Deleterious",33.21,31.52,5315,227,5556,0.0408567314614831,5109,0,5137,0,4.14781550198064E-066,16,16,"Artifact (5)"]
["UPN_Te4_005","X",76813112,"G","C","ATRX","ENST00000373344","missense_variant","aCc/aGc|p.Thr2170Ser/c.6509C>G",32307,1403,33782,0.0415309928364218,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.654,"Deleterious",33.75,31.46,18695,11,18737,0.000587073704435075,13612,1392,15045,0.0925224327018943,2,16,16,"Artifact (5)"]
["UPN_Te4_006","X",76813112,"G","C","ATRX","ENST00000373344","missense_variant","aCc/aGc|p.Thr2170Ser/c.6509C>G",32646,1462,34189,0.042762291965252,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.654,"Deleterious",33.56,31.5,17231,7,17274,0.000405233298599051,15415,1455,16915,0.0860183269287614,2,16,16,"Artifact (4)"]
["UPN_Te4_015","X",76813112,"G","C","ATRX","ENST00000373344","missense_variant","aCc/aGc|p.Thr2170Ser/c.6509C>G",20026,384,20481,0.0187490845173576,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.654,"Deleterious",33.33,31.23,10944,9,10999,0.000818256205109555,9082,375,9482,0.0395486184349293,2,16,16,"Artifact (6)"]
["UPN_Te4_009","X",76814228,"C","G","ATRX","ENST00000373344","missense_variant","tGg/tCg|p.Trp2139Ser/c.6416G>C",6988,336,7355,0.0456832087015636,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-12.788,"Deleterious",33.29,31.58,3822,334,4174,0.0800191662673694,3166,2,3181,0.000628733102797862,2.06486556354373E-081,15,15,"Artifact (6)"]
["UPN_Te4_003","X",76814282,"G","C","ATRX","ENST00000373344","missense_variant","tCt/tGt|p.Ser2121Cys/c.6362C>G",12630,201,12845,0.0156481121058778,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.167,"Deleterious",33.69,31.46,6695,4,6706,0.000596480763495377,5935,197,6139,0.0320899169245805,2,8,8,"Artifact (3)"]
["UPN_Te4_003","X",76829787,"C","G","ATRX","ENST00000373344","missense_variant","cGt/cCt|p.Arg2085Pro/c.6254G>C",13491,803,14357,0.0559309047851222,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-6.127,"Deleterious",33.81,31.58,5060,799,5884,0.135791978246091,8431,4,8473,0.00047208780833235,"1.07369081346166e-315",20,20,"Artifact (7)"]
["UPN_Te4_012","X",76829787,"C","G","ATRX","ENST00000373344","missense_variant","cGt/cCt|p.Arg2085Pro/c.6254G>C",10707,137,10864,0.0126104565537555,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-6.127,"Deleterious",33.69,31.31,4449,134,4593,0.0291748312649684,6258,3,6271,0.000478392600861107,2.06105565150042E-046,20,20,"Artifact (9)"]
["UPN_Te4_021","X",76829787,"C","G","ATRX","ENST00000373344","missense_variant","cGt/cCt|p.Arg2085Pro/c.6254G>C",9254,123,9395,0.013092070250133,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-6.127,"Deleterious",33.14,31.43,5408,123,5548,0.022170151405912,3846,0,3847,0,5.29138630387855E-029,20,20,"Artifact (9)"]
["UPN_Te4_017","X",76829815,"TC","T","ATRX","ENST00000373344","frameshift_variant","ggg/|p.Lys2076fs/c.6224delG",11104,208,11352,0.018322762508809,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.4,"NA",4907,5,4938,0.00101255569056298,6197,203,6414,0.0316495166822576,2,16,16,"Artifact (9)"]
["UPN_Te4_018","X",76829815,"TC","T","ATRX","ENST00000373344","frameshift_variant","ggg/|p.Lys2076fs/c.6224delG",22890,366,23337,0.0156832497750354,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.05,"NA",10031,6,10074,0.000595592614651578,12859,360,13263,0.0271431802759557,2,16,16,"Artifact (9)"]
["UPN_Te4_007","X",76849260,"C","G","ATRX","ENST00000373344","missense_variant","Gtt/Ctt|p.Val2006Leu/c.6016G>C",15106,626,15770,0.0396956246036779,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.04,"Tolerated",33.34,31.08,7090,618,7729,0.0799585974899728,8016,8,8041,0.000994901131700037,2.3781496524562E-182,15,15,"Artifact (8)"]
["UPN_Te4_018","X",76849260,"C","G","ATRX","ENST00000373344","missense_variant","Gtt/Ctt|p.Val2006Leu/c.6016G>C",29877,480,30476,0.0157500984381152,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.04,"Tolerated",32.93,30.49,14939,461,15453,0.0298323950042063,14938,19,15023,0.00126472741795913,6.61968911056188E-110,15,15,"Artifact (9)"]
["UPN_Te4_001","X",76855985,"A","G","ATRX","ENST00000373344","missense_variant","cTt/cCt|p.Leu1872Pro/c.5615T>C",8626,90,8740,0.0102974828375286,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-6.352,"Deleterious",35.08,33.77,8625,90,8739,0.0102986611740474,1,0,1,0,1,5,5,"Artifact (2)"]
["UPN_Te4_005","X",76874372,"T","C","ATRX","ENST00000373344","missense_variant","Att/Gtt|p.Ile1784Val/c.5350A>G",45546,4262,49936,0.0853492470362063,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.917,"Tolerated",33.78,31.65,26115,59,26238,0.00224864700053358,19431,4203,23698,0.177356738965314,2,22,22,"Artifact (6)"]
["UPN_Te4_015","X",76874372,"T","C","ATRX","ENST00000373344","missense_variant","Att/Gtt|p.Ile1784Val/c.5350A>G",34653,1598,36352,0.0439590669014085,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.917,"Tolerated",33.35,31.56,17344,54,17466,0.00309172105805565,17309,1544,18886,0.0817536799745844,2,22,22,"Artifact (6)"]
["UPN_Te4_007","X",76875957,"AT","A","ATRX","ENST00000373344","frameshift_variant","cta/|p.Asn1726fs/c.5172delA",4177,63,4255,0.0148061104582844,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",33.8,"NA",2096,31,2135,0.014519906323185,2081,32,2120,0.0150943396226415,0.899617973231676,3,3,"Artifact (4)"]
["UPN_Te4_009","X",76888837,"C","G","ATRX","ENST00000373344","missense_variant","gaG/gaC|p.Glu1664Asp/c.4992G>C",11303,186,11502,0.0161711006781429,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.167,"Tolerated",33.87,31.73,4561,185,4754,0.0389145982330669,6742,1,6748,0.00014819205690575,1.21319596824366E-070,7,7,"Artifact (8)"]
["UPN_Te4_010","X",76888837,"C","G","ATRX","ENST00000373344","missense_variant","gaG/gaC|p.Glu1664Asp/c.4992G>C",16920,238,17176,0.0138565440149045,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.167,"Tolerated",34.12,31.44,5980,236,6222,0.0379299260687882,10940,2,10954,0.000182581705313128,5.63380111891857E-102,7,7,"Artifact (8)"]
["UPN_Te4_004","X",76920172,"CT","C","ATRX","ENST00000373344","frameshift_variant","aaa/|p.Arg1302fs/c.3898delA",14901,247,15330,0.0161121983039791,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.47,"NA",14901,247,15330,0.0161121983039791,0,0,0,"NA",1,22,22,"Artifact (9)"]
["UPN_Te4_015","X",76920172,"CT","C","ATRX","ENST00000373344","frameshift_variant","aaa/|p.Arg1302fs/c.3898delA",4824,70,4967,0.0140930138916851,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.73,"NA",4824,70,4967,0.0140930138916851,0,0,0,"NA",1,22,22,"Artifact (9)"]
["UPN_Te4_013","X",76920173,"T","C","ATRX","ENST00000373344","missense_variant","Aga/Gga|p.Arg1302Gly/c.3904A>G",4851,55,4999,0.011002200440088,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-1.725,"Tolerated",34.67,32.13,4851,55,4999,0.011002200440088,0,0,0,"NA",1,5,5,"Artifact (6)"]
["UPN_Te4_011","X",76931740,"C","T","ATRX","ENST00000373344","missense_variant","Gac/Aac|p.Asp1264Asn/c.3790G>A",1956,22,1985,0.0110831234256927,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO",8.237E-006,"NO","NO",-1.071,"Tolerated",35.27,35.14,1956,22,1985,0.0110831234256927,0,0,0,"NA",1,2,2,"Artifact (1)"]
["UPN_Te4_011","X",76931761,"T","A","ATRX","ENST00000373344","missense_variant","Aca/Tca|p.Thr1257Ser/c.3769A>T",1955,21,1987,0.0105686965274283,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.384,"Tolerated",35.02,32.67,1954,21,1986,0.0105740181268882,1,0,1,0,1,1,1,"Artifact (2)"]
["UPN_Te4_001","X",123171446,"T","C","STAG2","ENST00000218089","missense_variant","Ttt/Ctt|p.Phe120Leu/c.358T>C",4218,47,4293,0.0109480549732122,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.452,"Deleterious",35.01,35.47,4218,47,4293,0.0109480549732122,0,0,0,"NA",1,10,10,"Artifact (2)"]
["UPN_Te4_012","X",123176418,"G","GAAAGAA","STAG2","ENST00000218089","disruptive_inframe_insertion","gga/gAAAGAAga|p.Gly129delinsGluArgArg/c.386-1_386insAAAGAA",14,"NA",14,"NA",1,0,0,0,0,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-15.433,"Deleterious",36,"NA",14,"NA",14,"NA",0,"NA",0,"NA","NA",1,1,"Artifact (0)"]
["UPN_Te4_021","X",123179032,"CT","C","STAG2","ENST00000218089","frameshift_variant","ctt/|p.Thr162fs/c.483delT",3251,58,3324,0.0174488567990373,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.77,"NA",3251,58,3324,0.0174488567990373,0,0,0,"NA",1,1,1,"Artifact (4)"]
["UPN_Te4_010","X",123179156,"C","G","STAG2","ENST00000218089","stop_gained","tCa/tGa|p.Ser202*/c.605C>G",15160,375,15553,0.0241111039670803,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.11,31.3,5214,373,5592,0.0667024320457797,9946,2,9961,0.00020078305391025,1.81055798851978E-165,10,10,"Artifact (5)"]
["UPN_Te4_021","X",123181347,"C","CT","STAG2","ENST00000218089","frameshift_variant","cgg/cTgg|p.Arg271fs/c.811_812insT",3279,52,3286,0.0158247108947048,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.35,"NA",0,0,0,"NA",3279,52,3286,0.0158247108947048,1,1,1,"Artifact (4)"]
["UPN_Te4_010","X",123184989,"A","T","STAG2","ENST00000218089","stop_gained","Aaa/Taa|p.Lys346*/c.1036A>T",10543,122,10713,0.0113880332306543,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",21.91,15.66,659,1,663,0.00150829562594268,9884,121,10050,0.0120398009950249,0.0070191144848968,4,4,"Artifact (7)"]
["UPN_Te4_006","X",123185013,"C","T","STAG2","ENST00000218089","missense_variant","Ctt/Ttt|p.Leu354Phe/c.1060C>T",11874,236,14251,0.0165602413865694,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.438,"Deleterious",22.77,16.32,0,0,0,"NA",11874,236,14251,0.0165602413865694,1,4,4,"Artifact (5)"]
["UPN_Te4_007","X",123191750,"A","G","STAG2","ENST00000218089","missense_variant","Atg/Gtg|p.Met447Val/c.1339A>G",25683,3862,29664,0.130191477885653,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.202,"Tolerated",32.85,31.35,15311,3834,19219,0.199490087933816,10372,28,10445,0.00268070847295357,0,23,23,"Artifact (6)"]
["UPN_Te4_016","X",123191750,"A","G","STAG2","ENST00000218089","missense_variant","Atg/Gtg|p.Met447Val/c.1339A>G",34069,1775,36005,0.0492987085127066,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.202,"Tolerated",32.48,31.05,20850,1716,22633,0.0758184951177484,13219,59,13372,0.00441220460664074,2.34018092073892E-269,23,23,"Artifact (7)"]
["UPN_Te4_011","X",123191759,"A","G","STAG2","ENST00000218089","missense_variant","Aga/Gga|p.Arg450Gly/c.1348A>G",25461,290,25858,0.0112150978420605,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-3.486,"Deleterious",34.4,34.15,15255,194,15476,0.0125355388989403,10206,96,10382,0.00924677326141399,2,16,16,"Artifact (3)"]
["UPN_Te4_002","X",123191804,"GT","G","STAG2","ENST00000218089","frameshift_variant","ttc/|p.Phe467fs/c.1400delT",43750,599,44750,0.0133854748603352,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.29,"NA",28479,404,29205,0.0138332477315528,15271,195,15545,0.0125442264393696,0.243896447891869,44,44,"Artifact (9)"]
["UPN_Te4_006","X",123191804,"GT","G","STAG2","ENST00000218089","frameshift_variant","ttc/|p.Phe467fs/c.1400delT",41137,557,42101,0.0132300895465666,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.24,"NA",25422,343,26094,0.0131447842415881,15715,214,16007,0.0133691509964391,0.930058585058905,44,44,"Artifact (9)"]
["UPN_Te4_015","X",123191804,"GT","G","STAG2","ENST00000218089","frameshift_variant","ttc/|p.Phe467fs/c.1400delT",28588,353,29284,0.0120543641579019,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",33.31,"NA",19014,236,19544,0.0120753172329104,9574,117,9740,0.0120123203285421,0.909787243514757,44,44,"Artifact (9)"]
["UPN_Te4_014","X",123195631,"T","A","STAG2","ENST00000218089","missense_variant","gaT/gaA|p.Asp515Glu/c.1545T>A",708,34,747,0.0455153949129853,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-2.517,"Deleterious",17.96,15.38,708,34,747,0.0455153949129853,0,0,0,"NA",1,1,1,"Artifact (2)"]
["UPN_Te4_007","X",123195639,"A","G","STAG2","ENST00000218089","missense_variant","gAg/gGg|p.Glu518Gly/c.1553A>G",990,21,1036,0.0202702702702703,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-6.687,"Deleterious",15.99,15.05,990,21,1036,0.0202702702702703,0,0,0,"NA",1,8,9,"Artifact (3)"]
["UPN_Te4_004","X",123195662,"C","T","STAG2","ENST00000218089","missense_variant","Ctt/Ttt|p.Leu526Phe/c.1576C>T",74,23,571,0.0402802101576182,0,0,0,0,0,0,0,1,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.343,"Tolerated",14.92,15.91,74,23,571,0.0402802101576182,0,0,0,"NA",1,1,1,"Artifact (6)"]
["UPN_Te4_010","X",123195675,"G","A","STAG2","ENST00000218089","missense_variant","aGa/aAa|p.Arg530Lys/c.1589G>A",7226,76,7384,0.0102925243770314,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","rs5911741","rs5911741","NO","NO","NO","NO",-1.114,"Tolerated",20.75,15.42,995,69,1106,0.0623869801084991,6231,7,6278,0.00111500477859191,2.18370830312929E-050,1,1,"Artifact (5)"]
["UPN_Te4_003","X",123195687,"A","T","STAG2","ENST00000218089","missense_variant","gAa/gTa|p.Glu534Val/c.1601A>T",7391,112,7520,0.0148936170212766,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.067,"Deleterious",20.39,15.88,743,1,746,0.00134048257372654,6648,111,6774,0.0163861824623561,0.000177771450790498,15,15,"Artifact (9)"]
["UPN_Te4_004","X",123195687,"A","T","STAG2","ENST00000218089","missense_variant","gAa/gTa|p.Glu534Val/c.1601A>T",6409,68,6482,0.0104905893242826,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.067,"Deleterious",20.22,16.96,535,0,535,0,5874,68,5947,0.0114343366403229,0.00603288410897073,15,15,"Artifact (9)"]
["UPN_Te4_015","X",123195687,"A","T","STAG2","ENST00000218089","missense_variant","gAa/gTa|p.Glu534Val/c.1601A>T",2896,60,2964,0.0202429149797571,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.067,"Deleterious",19.18,15.73,328,1,330,0.00303030303030303,2568,59,2634,0.0223993925588459,0.0117134712648827,15,15,"Artifact (7)"]
["UPN_Te4_008","X",123195701,"G","T","STAG2","ENST00000218089","missense_variant","Gtg/Ttg|p.Val539Leu/c.1615G>T",2849,67,2916,0.0229766803840878,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.489,"Tolerated",21.19,18.42,293,5,298,0.0167785234899329,2556,62,2618,0.0236822001527884,0.545552849126196,2,2,"Artifact (2)"]
["UPN_Te4_010","X",123195707,"A","T","STAG2","ENST00000218089","stop_gained","Aga/Tga|p.Arg541*/c.1621A>T",7424,170,7615,0.0223243598161523,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",21.22,17.26,944,54,1001,0.0539460539460539,6480,116,6614,0.0175385545811914,1.82864480350609E-010,6,6,"Artifact (4)"]
["UPN_Te4_011","X",123195709,"A","T","STAG2","ENST00000218089","missense_variant","agA/agT|p.Arg541Ser/c.1623A>T",4695,100,4888,0.0204582651391162,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.726,"Deleterious",20.53,15.63,367,55,493,0.111561866125761,4328,45,4395,0.0102389078498294,5.26751825067908E-033,8,8,"Artifact (3)"]
["UPN_Te4_001","X",123195719,"A","T","STAG2","ENST00000218089","stop_gained","Aaa/Taa|p.Lys545*/c.1633A>T",2790,51,2845,0.0179261862917399,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",20.12,15.18,97,2,99,0.0202020202020202,2693,49,2746,0.0178441369264385,0.697716636001635,5,5,"Artifact (7)"]
["UPN_Te4_010","X",123196995,"C","G","STAG2","ENST00000218089","missense_variant","aaC/aaG|p.Asn587Lys/c.1761C>G",5843,62,5913,0.0104853712159648,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.853,"Deleterious",35.2,35.1,5843,62,5913,0.0104853712159648,0,0,0,"NA",1,1,1,"Artifact (0)"]
["UPN_Te4_005","X",123197852,"A","G","STAG2","ENST00000218089","missense_variant","gAt/gGt|p.Asp659Gly/c.1976A>G",22371,2585,24995,0.103420684136827,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.237,"Deleterious",33.51,31.62,11191,2558,13764,0.185847137460041,11180,27,11231,0.00240406019054403,0,23,23,"Artifact (4)"]
["UPN_Te4_011","X",123197852,"A","G","STAG2","ENST00000218089","missense_variant","gAt/gGt|p.Asp659Gly/c.1976A>G",12579,701,13308,0.0526750826570484,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.237,"Deleterious",33.16,31.5,7046,687,7744,0.0887138429752066,5533,14,5564,0.00251617541337168,7.80502977004046E-144,23,23,"Artifact (5)"]
["UPN_Te4_020","X",123197852,"A","G","STAG2","ENST00000218089","missense_variant","gAt/gGt|p.Asp659Gly/c.1976A>G",6430,242,6678,0.0362383947289608,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-6.237,"Deleterious",33.16,31.79,4044,236,4286,0.05506299580028,2386,6,2392,0.00250836120401338,3.61749871113666E-038,23,23,"Artifact (6)"]
["UPN_Te4_002","X",123200254,"C","G","STAG2","ENST00000218089","missense_variant","Ctt/Gtt|p.Leu745Val/c.2233C>G",35082,369,35518,0.0103890984852751,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.389,"Tolerated",33.81,31.12,14061,360,14459,0.0248979874126841,21021,9,21059,0.000427370720357092,5.13479675969021E-127,9,9,"Artifact (7)"]
["UPN_Te4_012","X",123205025,"G","T","STAG2","ENST00000218089","missense_variant","ttG/ttT|p.Leu795Phe/c.2385G>T",7359,809,8188,0.0988031265266243,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-3.256,"Deleterious",20.01,15.49,7359,809,8188,0.0988031265266243,0,0,0,"NA",1,6,6,"Artifact (2)"]
["UPN_Te4_017","X",123205099,"C","T","STAG2","ENST00000218089","missense_variant","tCa/tTa|p.Ser820Leu/c.2459C>T",15406,374,18214,0.0205336554298891,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.82,"Deleterious",19.25,15.56,5463,19,7778,0.00244278734893289,9943,355,10436,0.0340168646991184,4.91188834254207E-044,2,2,"Artifact (2)"]
["UPN_Te4_005","X",123205135,"A","G","STAG2","ENST00000218089","missense_variant","cAt/cGt|p.His832Arg/c.2495A>G",41896,3043,45108,0.0674603174603175,0,0,0,0,1,1,0,0,2,"NO","NO","COSM1151460, COSM755534","lung",2,"NO","NO","NO","NO","NO","NO",-4.167,"Deleterious",33.68,31.64,13530,2968,16524,0.179617526022755,28366,75,28584,0.00262384550797649,0,23,23,"Artifact (3)"]
["UPN_Te4_014","X",123205135,"A","G","STAG2","ENST00000218089","missense_variant","cAt/cGt|p.His832Arg/c.2495A>G",22277,833,23246,0.0358341219994838,0,0,0,0,1,1,0,0,2,"NO","NO","COSM1151460, COSM755534","lung",2,"NO","NO","NO","NO","NO","NO",-4.167,"Deleterious",33.17,31.8,8824,783,9639,0.0812324929971989,13453,50,13607,0.00367457926067465,1.19921348087728E-237,23,23,"Artifact (3)"]
["UPN_Te4_001","X",123215314,"C","T","STAG2","ENST00000218089","missense_variant","Cgt/Tgt|p.Arg954Cys/c.2860C>T",5791,95,6006,0.0158175158175158,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-7.398,"Deleterious",29.54,23.91,3015,25,3056,0.00818062827225131,2776,70,2950,0.023728813559322,6.79885439273391E-007,1,1,"Artifact (2)"]
["UPN_Te4_007","X",123215374,"C","T","STAG2","ENST00000218089","missense_variant","Cac/Tac|p.His974Tyr/c.2920C>T",2395,38,2435,0.015605749486653,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-5.568,"Deleterious",34.24,33.34,0,0,0,"NA",2395,38,2435,0.015605749486653,1,1,1,"Artifact (0)"]
["UPN_Te4_007","X",123224561,"C","G","STAG2","ENST00000218089","missense_variant","ttC/ttG|p.Phe1138Leu/c.3414C>G",1573,46,1624,0.0283251231527094,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.538,"Tolerated",32.76,31.22,986,46,1036,0.0444015444015444,587,0,588,0,1.32485896222876E-009,11,11,"Artifact (6)"]
["UPN_Te4_013","X",123227920,"G","T","STAG2","ENST00000218089","missense_variant","Gtt/Ttt|p.Val1211Phe/c.3631G>T",1576,20,1597,0.0125234815278647,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.74,"Tolerated",34.59,30.4,1576,20,1597,0.0125234815278647,0,0,0,"NA",1,1,1,"Artifact (1)"]
["UPN_Te4_005","X",129147132,"C","G","BCORL1","ENST00000540052","missense_variant","gaC/gaG|p.Asp128Glu/c.384C>G",43518,637,44214,0.0144072013389424,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.215,"Tolerated",33.4,30.77,26337,615,26984,0.0227912837236881,17181,22,17230,0.00127684271619269,7.83918192591192E-102,9,9,"Artifact (6)"]
["UPN_Te4_005","X",129147209,"G","C","BCORL1","ENST00000540052","missense_variant","tGc/tCc|p.Cys154Ser/c.461G>C",35549,999,36666,0.0272459499263623,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.242,"Tolerated",32.55,31.42,9781,13,9830,0.00132248219735504,25768,986,26836,0.0367416902668058,2,9,9,"Artifact (3)"]
["UPN_Te4_001","X",129147315,"G","GC","BCORL1","ENST00000540052","frameshift_variant","ctg/cCtg|p.Leu191fs/c.571dupC",14488,185,14540,0.0127235213204952,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.17,"NA",5963,178,5985,0.0297410192147034,8525,7,8555,0.000818234950321449,2,1,1,"Artifact (4)"]
["UPN_Te4_015","X",129147386,"T","A","BCORL1","ENST00000540052","missense_variant","gTg/gAg|p.Val213Glu/c.638T>A",11866,154,12308,0.0125121871953201,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.03,"Tolerated",23.51,18.59,2408,13,2538,0.00512214342001576,9458,141,9770,0.014431934493347,0.000103423782950439,3,3,"Artifact (5)"]
["UPN_Te4_016","X",129147416,"T","C","BCORL1","ENST00000540052","missense_variant","gTt/gCt|p.Val223Ala/c.668T>C",10346,110,10850,0.0101382488479263,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.584,"Tolerated",21.05,19.04,870,2,1057,0.00189214758751183,9476,108,9793,0.0110282855100582,0.00822188397935318,6,6,"Artifact (8)"]
["UPN_Te4_020","X",129147498,"TC","T","BCORL1","ENST00000540052","frameshift_variant","ccc/|p.Leu252fs/c.753delC",7064,81,7161,0.0113112693757855,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.07,"NA",2050,1,2054,0.000486854917234664,5014,80,5107,0.0156647738398277,2,5,5,"Artifact (6)"]
["UPN_Te4_009","X",129147521,"T","C","BCORL1","ENST00000540052","missense_variant","cTg/cCg|p.Leu258Pro/c.773T>C",6505,1117,7673,0.145575394239541,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.082,"Tolerated",31.18,31.3,1145,4,1164,0.00343642611683849,5360,1113,6509,0.170994008296205,2,23,23,"Artifact (5)"]
["UPN_Te4_018","X",129147521,"T","C","BCORL1","ENST00000540052","missense_variant","cTg/cCg|p.Leu258Pro/c.773T>C",26927,1343,28534,0.0470666573210906,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.082,"Tolerated",30.91,31.11,7570,26,7702,0.00337574655933524,19357,1317,20832,0.0632200460829493,2,23,23,"Artifact (6)"]
["UPN_Te4_003","X",129147566,"A","G","BCORL1","ENST00000540052","missense_variant","aAc/aGc|p.Asn273Ser/c.818A>G",2971,46,3065,0.0150081566068515,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.259,"Tolerated",24.71,18.93,1429,39,1488,0.0262096774193548,1542,7,1577,0.00443880786303107,3.61615130289049E-007,15,17,"Artifact (11)"]
["UPN_Te4_001","X",129147566,"A","T","BCORL1","ENST00000540052","missense_variant","aAc/aTc|p.Asn273Ile/c.818A>T",6509,75,6873,0.0109122653862942,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.447,"Tolerated",22.71,17.07,3154,33,3330,0.00990990990990991,3355,42,3543,0.0118543607112616,0.486469149398598,2,17,"Artifact (5)"]
["UPN_Te4_001","X",129147596,"T","C","BCORL1","ENST00000540052","missense_variant","gTg/gCg|p.Val283Ala/c.848T>C",4692,72,4817,0.0149470624870251,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.36,"Tolerated",25.18,19.81,1256,8,1266,0.00631911532385466,3436,64,3551,0.0180230920867361,2,7,7,"Artifact (6)"]
["UPN_Te4_004","X",129147662,"T","C","BCORL1","ENST00000540052","missense_variant","cTt/cCt|p.Leu305Pro/c.914T>C",4508,53,4650,0.0113978494623656,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.695,"Tolerated",27,34.06,1580,7,1655,0.00422960725075529,2928,46,2995,0.0153589315525876,2,2,2,"Artifact (3)"]
["UPN_Te4_009","X",129147724,"C","T","BCORL1","ENST00000540052","missense_variant","Ccg/Tcg|p.Pro326Ser/c.976C>T",2363,25,2412,0.0103648424543947,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.138,"Tolerated",28.55,33.16,1163,12,1194,0.0100502512562814,1200,13,1218,0.0106732348111658,1,1,1,"Artifact (4)"]
["UPN_Te4_010","X",129147742,"C","T","BCORL1","ENST00000540052","missense_variant","Ccc/Tcc|p.Pro332Ser/c.994C>T",1557,23,1584,0.014520202020202,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.186,"Tolerated",34.4,32.87,191,0,192,0,1366,23,1392,0.0165229885057471,2,1,1,"Artifact (3)"]
["UPN_Te4_008","X",129147788,"CA","C","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Ala348fs/c.1041delA",5012,53,5108,0.0103758809710258,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",33.21,"NA",1048,0,1064,0,3964,53,4044,0.0131058358061325,2,1,1,"Artifact (4)"]
["UPN_Te4_004","X",129147799,"G","C","BCORL1","ENST00000540052","missense_variant","Gcc/Ccc|p.Ala351Pro/c.1051G>C",1705,22,1735,0.0126801152737752,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.779,"Tolerated",34.82,32.82,145,0,147,0,1560,22,1588,0.0138539042821159,2,1,10,"Artifact (3)"]
["UPN_Te4_008","X",129147812,"T","C","BCORL1","ENST00000540052","missense_variant","gTg/gCg|p.Val355Ala/c.1064T>C",1904,37,1997,0.0185277916875313,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.232,"Tolerated",21.32,20.59,893,6,913,0.00657174151150055,1011,31,1084,0.0285977859778598,0.000167241057192022,8,8,"Artifact (8)"]
["UPN_Te4_003","X",129147817,"A","C","BCORL1","ENST00000540052","missense_variant","Atg/Ctg|p.Met357Leu/c.1069A>C",574,53,630,0.0841269841269841,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.195,"Tolerated",21.99,15.17,224,51,276,0.184782608695652,350,2,354,0.00564971751412429,1.6799492773397E-017,5,5,"Artifact (6)"]
["UPN_Te4_014","X",129147818,"T","A","BCORL1","ENST00000540052","missense_variant","aTg/aAg|p.Met357Lys/c.1070T>A",1653,205,1864,0.109978540772532,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.131,"Tolerated",21.08,15.92,666,161,829,0.194209891435464,987,44,1035,0.042512077294686,7.23101429853328E-026,15,15,"Artifact (6)"]
["UPN_Te4_019","X",129147835,"T","A","BCORL1","ENST00000540052","missense_variant","Tct/Act|p.Ser363Thr/c.1087T>A",582,37,635,0.0582677165354331,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.604,"Tolerated",19.18,15.51,207,36,245,0.146938775510204,375,1,390,0.00256410256410256,1.07309621961145E-014,3,5,"Artifact (4)"]
["UPN_Te4_010","X",129147877,"G","T","BCORL1","ENST00000540052","missense_variant","Gct/Tct|p.Ala377Ser/c.1129G>T",193,30,270,0.111111111111111,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.614,"Tolerated",32.67,31.4,1,29,77,0.376623376623377,192,1,193,0.00518134715025907,4.21187744124358E-034,1,11,"Artifact (3)"]
["UPN_Te4_019","X",129147913,"A","C","BCORL1","ENST00000540052","missense_variant","Atc/Ctc|p.Ile389Leu/c.1165A>C",1399,241,1647,0.146326654523376,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.416,"Tolerated",21.9,15.38,1009,239,1251,0.191047162270184,390,2,396,0.00505050505050505,4.73780953609658E-028,2,2,"Artifact (3)"]
["UPN_Te4_013","X",129147949,"A","C","BCORL1","ENST00000540052","missense_variant","Acg/Ccg|p.Thr401Pro/c.1201A>C",844,351,1198,0.2929883139,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.784,"Tolerated",22.08,15.27,579,351,932,0.3766094421,265,0,266,0,2,20,20,"Artifact (6)"]
["UPN_Te4_001","X",129148048,"C","G","BCORL1","ENST00000540052","missense_variant","Ccc/Gcc|p.Pro434Ala/c.1300C>G",13795,222,14055,0.015795090715048,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.403,"Tolerated",32.49,30.83,9461,216,9699,0.0222703371481596,4334,6,4356,0.00137741046831956,2.76663941038055E-027,16,16,"Artifact (10)"]
["UPN_Te4_013","X",129148048,"C","G","BCORL1","ENST00000540052","missense_variant","Ccc/Gcc|p.Pro434Ala/c.1300C>G",3651,68,3732,0.0182207931404073,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.403,"Tolerated",32.39,31.57,2532,67,2609,0.0256803372939824,1119,1,1123,0.000890471950133571,1.26260988570494E-009,16,16,"Artifact (11)"]
["UPN_Te4_004","X",129148103,"T","C","BCORL1","ENST00000540052","missense_variant","aTc/aCc|p.Ile452Thr/c.1355T>C",12791,1347,14185,0.0949594642227705,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.96,"Tolerated",33.68,31.51,7454,16,7503,0.00213248034119685,5337,1331,6682,0.199191858724933,2,27,27,"Artifact (6)"]
["UPN_Te4_013","X",129148103,"T","C","BCORL1","ENST00000540052","missense_variant","aTc/aCc|p.Ile452Thr/c.1355T>C",3653,77,3743,0.0205717339032861,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.96,"Tolerated",33.8,30.97,2620,2,2632,0.000759878419452888,1033,75,1111,0.0675067506750675,2,27,27,"Artifact (6)"]
["UPN_Te4_022","X",129148103,"T","C","BCORL1","ENST00000540052","missense_variant","aTc/aCc|p.Ile452Thr/c.1355T>C",8571,176,8768,0.0200729927007299,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.96,"Tolerated",34.16,32.06,5999,15,6030,0.00248756218905473,2572,161,2738,0.0588020452885318,2,27,27,"Artifact (6)"]
["UPN_Te4_009","X",129148414,"G","C","BCORL1","ENST00000540052","missense_variant","Gct/Cct|p.Ala556Pro/c.1666G>C",7747,93,7851,0.0118456247611769,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.316,"Tolerated",33.62,30.91,3137,3,3144,0.000954198473282443,4610,90,4707,0.0191204588910134,2,7,7,"Artifact (5)"]
["UPN_Te4_002","X",129148505,"G","T","BCORL1","ENST00000540052","missense_variant","gGc/gTc|p.Gly586Val/c.1757G>T",5792,70,5913,0.0118383223406054,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.502,"Tolerated",35.23,31.49,1,69,113,0.610619469026549,5791,1,5800,0.000172413793103448,1.26693892738189E-158,9,14,"Artifact (8)"]
["UPN_Te4_009","X",129148505,"G","T","BCORL1","ENST00000540052","missense_variant","gGc/gTc|p.Gly586Val/c.1757G>T",3201,46,3279,0.0140286672766087,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.502,"Tolerated",35.26,30.91,0,43,70,0.614285714285714,3201,3,3209,0.000934870676223122,1.23023761975894E-094,9,14,"Artifact (8)"]
["UPN_Te4_009","X",129148671,"AC","A","BCORL1","ENST00000540052","frameshift_variant","ccc/|p.Met644fs/c.1929delC",12690,147,12899,0.0113962322660671,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.55,"NA",1176,21,1200,0.0175,11514,126,11699,0.0107701512949825,2,30,30,"Artifact (8)"]
["UPN_Te4_021","X",129148671,"AC","A","BCORL1","ENST00000540052","frameshift_variant","ccc/|p.Met644fs/c.1929delC",29571,363,30039,0.0120842904224508,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",34.7,"NA",7665,100,7795,0.0128287363694676,21906,263,22244,0.0118234130552059,2,30,30,"Artifact (8)"]
["UPN_Te4_008","X",129148730,"T","C","BCORL1","ENST00000540052","missense_variant","gTc/gCc|p.Val661Ala/c.1982T>C",36248,6353,42813,0.148389507859762,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.427,"Tolerated",31.02,31.23,4028,7,4141,0.0016904129437334,32220,6346,38672,0.164098055440629,2,22,22,"Artifact (5)"]
["UPN_Te4_014","X",129148730,"T","C","BCORL1","ENST00000540052","missense_variant","gTc/gCc|p.Val661Ala/c.1982T>C",22901,1337,24380,0.0548400328137818,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.427,"Tolerated",30.86,31.2,4208,24,4331,0.00554144539367352,18693,1313,20049,0.0654895506010275,2,22,22,"Artifact (6)"]
["UPN_Te4_002","X",129148946,"A","G","BCORL1","ENST00000540052","missense_variant","gAc/gGc|p.Asp733Gly/c.2198A>G",38370,1613,40401,0.0399247543377639,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.398,"Tolerated",30.59,31.63,22318,1579,24193,0.0652668127144215,16052,34,16208,0.00209772951628825,1.99398961167589E-305,22,22,"Artifact (7)"]
["UPN_Te4_011","X",129148946,"A","G","BCORL1","ENST00000540052","missense_variant","gAc/gGc|p.Asp733Gly/c.2198A>G",26171,810,27308,0.0296616376153508,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.398,"Tolerated",29.04,31.61,16424,787,17452,0.0450951180380472,9747,23,9856,0.0023336038961039,1.09581839919472E-122,22,22,"Artifact (7)"]
["UPN_Te4_012","X",129148946,"A","G","BCORL1","ENST00000540052","missense_variant","gAc/gGc|p.Asp733Gly/c.2198A>G",25785,433,26446,0.0163729864629812,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.398,"Tolerated",29.55,31.51,16298,412,16889,0.0243945763514714,9487,21,9557,0.00219734226221618,1.49432400467119E-055,22,22,"Artifact (9)"]
["UPN_Te4_022","X",129148946,"A","G","BCORL1","ENST00000540052","missense_variant","gAc/gGc|p.Asp733Gly/c.2198A>G",19324,307,19775,0.0155246523388116,0,0,0,0,1,1,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.398,"Tolerated",29.53,31.86,12193,287,12582,0.0228103640120807,7131,20,7193,0.00278048102321702,5.79036880852767E-035,22,22,"Artifact (9)"]
["UPN_Te4_005","X",129149236,"C","G","BCORL1","ENST00000540052","missense_variant","Cct/Gct|p.Pro830Ala/c.2488C>G",42845,593,43514,0.013627797950085,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.243,"Tolerated",32.75,31.11,25980,571,26602,0.0214645515374784,16865,22,16912,0.00130085146641438,8.68199581180738E-093,9,9,"Artifact (5)"]
["UPN_Te4_010","X",129149236,"C","G","BCORL1","ENST00000540052","missense_variant","Cct/Gct|p.Pro830Ala/c.2488C>G",24351,409,24808,0.0164866172202515,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.243,"Tolerated",32.71,31.34,14931,400,15360,0.0260416666666667,9420,9,9448,0.000952582557154953,2.12411328311083E-070,9,9,"Artifact (6)"]
["UPN_Te4_009","X",129149596,"C","G","BCORL1","ENST00000540052","missense_variant","Cct/Gct|p.Pro950Ala/c.2848C>G",10864,332,11227,0.0295715685401265,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.741,"Tolerated",33.5,31.16,4229,322,4565,0.0705366922234392,6635,10,6662,0.00150105073551486,3.50600136907439E-113,15,15,"Artifact (7)"]
["UPN_Te4_001","X",129155008,"A","AG","BCORL1","ENST00000540052","frameshift_variant","gct/gGct|p.Ala1166fs/c.3496dupG",7044,71,7099,0.0100014086491055,0,0,0,0,0,0,0,1,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",33.76,"NA",7044,71,7099,0.0100014086491055,0,0,0,"NA",1,1,7,"Artifact (6)"]
["UPN_Te4_002","X",129156884,"A","G","BCORL1","ENST00000540052","missense_variant","aAg/aGg|p.Lys1207Arg/c.3620A>G",31925,407,32356,0.0125788107306218,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.238,"Tolerated",35.73,35.02,31919,407,32350,0.01258114374034,6,0,6,0,1,22,22,"Artifact (7)"]
["UPN_Te4_007","X",129156884,"A","G","BCORL1","ENST00000540052","missense_variant","aAg/aGg|p.Lys1207Arg/c.3620A>G",18905,229,19155,0.0119551031062386,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.238,"Tolerated",35.75,35.43,18905,229,19155,0.0119551031062386,0,0,0,"NA",1,22,22,"Artifact (7)"]
["UPN_Te4_013","X",129156884,"A","G","BCORL1","ENST00000540052","missense_variant","aAg/aGg|p.Lys1207Arg/c.3620A>G",6356,65,6424,0.0101183063511831,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.238,"Tolerated",35.75,35.6,6356,65,6424,0.0101183063511831,0,0,0,"NA",1,22,22,"Artifact (7)"]
["UPN_Te4_022","X",129156884,"A","G","BCORL1","ENST00000540052","missense_variant","aAg/aGg|p.Lys1207Arg/c.3620A>G",10918,128,11049,0.0115847588017015,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.238,"Tolerated",35.85,35.35,10918,128,11049,0.0115847588017015,0,0,0,"NA",1,22,22,"Artifact (7)"]
["UPN_Te4_009","X",129159129,"A","G","BCORL1","ENST00000540052","missense_variant","Aag/Gag|p.Lys1285Glu/c.3853A>G",15878,2326,18275,0.127277701778386,0,1,0,0,1,1,0,0,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.027,"Tolerated",33.01,31.35,8619,2301,10954,0.210060251962753,7259,25,7321,0.0034148340390657,0,23,23,"Artifact (6)"]
["UPN_Te4_018","X",129159129,"A","G","BCORL1","ENST00000540052","missense_variant","Aag/Gag|p.Lys1285Glu/c.3853A>G",40718,2471,43461,0.0568555716619498,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.027,"Tolerated",32.83,31.43,21987,2367,24429,0.0968930369642638,18731,104,19032,0.00546448087431694,0,23,23,"Artifact (7)"]
["UPN_Te4_009","X",129159178,"T","C","BCORL1","ENST00000540052","missense_variant","aTg/aCg|p.Met1301Thr/c.3902T>C",16780,1420,18290,0.0776380536,0,0,0,0,1,1,0,0,2,"NO","NO","COSM4106595, COSM4106596","stomach",2,"NO","NO","NO","NO","NO","NO",0.084,"Tolerated",33.65,31.54,10916,12,11004,0.0010905125,5864,1408,7286,0.1932473236,2,21,21,"Artifact (11)"]
["UPN_Te4_010","X",129159178,"T","C","BCORL1","ENST00000540052","missense_variant","aTg/aCg|p.Met1301Thr/c.3902T>C",20726,1854,22661,0.0818145713,0,0,0,0,1,1,0,0,2,"NO","NO","COSM4106595, COSM4106596","stomach",2,"NO","NO","NO","NO","NO","NO",0.084,"Tolerated",33.6,31.57,12766,27,12861,0.0020993702,7960,1827,9800,0.1864285714,2,21,21,"Artifact (11)"]
["UPN_Te4_011","X",129159178,"T","C","BCORL1","ENST00000540052","missense_variant","aTg/aCg|p.Met1301Thr/c.3902T>C",20829,898,21840,0.0411172161,0,0,0,0,1,1,0,0,2,"NO","NO","COSM4106595, COSM4106596","stomach",2,"NO","NO","NO","NO","NO","NO",0.084,"Tolerated",33.33,31.64,12466,33,12604,0.0026182164,8363,865,9236,0.093655262,2,21,21,"Artifact (11)"]
["UPN_Te4_012","X",129159178,"T","C","BCORL1","ENST00000540052","missense_variant","aTg/aCg|p.Met1301Thr/c.3902T>C",17838,460,18337,0.0250858919,0,0,0,0,1,1,0,0,2,"NO","NO","COSM4106595, COSM4106596","stomach",2,"NO","NO","NO","NO","NO","NO",0.084,"Tolerated",33.76,31.74,10071,18,10122,0.0017783047,7767,442,8215,0.053804017,2,21,21,"Artifact (11)"]
["UPN_Te4_013","X",129159178,"T","C","BCORL1","ENST00000540052","missense_variant","aTg/aCg|p.Met1301Thr/c.3902T>C",5247,208,5485,0.0379216044,0,0,0,0,1,1,0,0,2,"NO","NO","COSM4106595, COSM4106596","stomach",2,"NO","NO","NO","NO","NO","NO",0.084,"Tolerated",33.18,31.78,2991,11,3027,0.003633961,2256,197,2458,0.0801464605,2,21,21,"Artifact (11)"]
["UPN_Te4_014","X",129159178,"T","C","BCORL1","ENST00000540052","missense_variant","aTg/aCg|p.Met1301Thr/c.3902T>C",23006,885,24010,0.0368596418,0,0,0,0,1,1,0,0,2,"NO","NO","COSM4106595, COSM4106596","stomach",2,"NO","NO","NO","NO","NO","NO",0.084,"Tolerated",33.23,31.44,13312,47,13458,0.0034923466,9694,838,10552,0.0794162244,2,21,21,"Artifact (11)"]
["UPN_Te4_015","X",129159178,"T","C","BCORL1","ENST00000540052","missense_variant","aTg/aCg|p.Met1301Thr/c.3902T>C",31458,1243,32920,0.0377582017,0,0,0,0,1,1,0,0,2,"NO","NO","COSM4106595, COSM4106596","stomach",2,"NO","NO","NO","NO","NO","NO",0.084,"Tolerated",33.23,31.61,18330,57,18559,0.0030712862,13128,1186,14361,0.0825847782,2,21,21,"Artifact (11)"]
["UPN_Te4_016","X",129159178,"T","C","BCORL1","ENST00000540052","missense_variant","aTg/aCg|p.Met1301Thr/c.3902T>C",32272,1145,33616,0.0340611614,0,0,0,0,1,1,0,0,2,"NO","NO","COSM4106595, COSM4106596","stomach",2,"NO","NO","NO","NO","NO","NO",0.084,"Tolerated",33.2,31.59,18765,65,19010,0.003419253,13507,1080,14606,0.0739422155,2,21,21,"Artifact (11)"]
["UPN_Te4_017","X",129159178,"T","C","BCORL1","ENST00000540052","missense_variant","aTg/aCg|p.Met1301Thr/c.3902T>C",17867,447,18349,0.0243610006,0,0,0,0,1,1,0,0,2,"NO","NO","COSM4106595, COSM4106596","stomach",2,"NO","NO","NO","NO","NO","NO",0.084,"Tolerated",33.77,31.94,10480,30,10540,0.0028462998,7387,417,7809,0.0533999232,2,21,21,"Artifact (11)"]
["UPN_Te4_018","X",129159178,"T","C","BCORL1","ENST00000540052","missense_variant","aTg/aCg|p.Met1301Thr/c.3902T>C",41555,1670,43489,0.0384005151,0,0,0,0,1,1,0,0,2,"NO","NO","COSM4106595, COSM4106596","stomach",2,"NO","NO","NO","NO","NO","NO",0.084,"Tolerated",33.28,31.61,24241,64,24533,0.0026087311,17314,1606,18956,0.0847225153,2,21,21,"Artifact (11)"]
["UPN_Te4_020","X",129159178,"T","C","BCORL1","ENST00000540052","missense_variant","aTg/aCg|p.Met1301Thr/c.3902T>C",14082,384,14495,0.0264918938,0,0,0,0,1,1,0,0,2,"NO","NO","COSM4106595, COSM4106596","stomach",2,"NO","NO","NO","NO","NO","NO",0.084,"Tolerated",33.76,31.54,8320,25,8370,0.0029868578,5762,359,6125,0.0586122449,2,21,21,"Artifact (11)"]
["UPN_Te4_021","X",129159178,"T","C","BCORL1","ENST00000540052","missense_variant","aTg/aCg|p.Met1301Thr/c.3902T>C",33491,701,34249,0.0204677509,0,0,0,0,1,1,0,0,2,"NO","NO","COSM4106595, COSM4106596","stomach",2,"NO","NO","NO","NO","NO","NO",0.084,"Tolerated",33.74,31.76,19159,47,19256,0.0024407977,14332,654,14993,0.0436203562,2,21,21,"Artifact (11)"]
["UPN_Te4_022","X",129159178,"T","C","BCORL1","ENST00000540052","missense_variant","aTg/aCg|p.Met1301Thr/c.3902T>C",12853,328,13208,0.0248334343,0,0,0,0,1,1,0,0,2,"NO","NO","COSM4106595, COSM4106596","stomach",2,"NO","NO","NO","NO","NO","NO",0.084,"Tolerated",33.67,31.51,7091,25,7138,0.0035023816,5762,303,6070,0.0499176277,2,21,21,"Artifact (11)"]
["UPN_Te4_001","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",22938,423,23504,0.0179969367,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",31.89,"NA",11371,208,11668,0.0178265341,11567,215,11836,0.0181649206,0.8830537677,22,22,"Artifact (15)"]
["UPN_Te4_002","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",45365,728,46275,0.0157320367,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",32.68,"NA",22593,362,23046,0.015707715,22772,366,23229,0.0157561669,0.9702186997,22,22,"Artifact (15)"]
["UPN_Te4_003","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",32458,512,33125,0.0154566038,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",32.61,"NA",16165,256,16502,0.0155132711,16293,256,16623,0.0154003489,0.9644782126,22,22,"Artifact (15)"]
["UPN_Te4_004","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",33852,577,34578,0.0166869108,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",32.66,"NA",16853,287,17220,0.0166666667,16999,290,17358,0.0167069939,1,22,22,"Artifact (15)"]
["UPN_Te4_005","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",45777,703,46667,0.0150641781,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",32.64,"NA",22788,352,23239,0.0151469512,22989,351,23428,0.0149820727,0.8792675442,22,22,"Artifact (15)"]
["UPN_Te4_006","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",43305,680,44168,0.0153957616,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",32.67,"NA",21587,339,22019,0.0153957945,21718,341,22149,0.0153957289,1,22,22,"Artifact (15)"]
["UPN_Te4_007","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",28547,536,29242,0.0183297996,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",32.63,"NA",14223,266,14574,0.0182516811,14324,270,14668,0.0184074175,0.9305850573,22,22,"Artifact (15)"]
["UPN_Te4_008","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",67338,1250,68869,0.0181504015,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",32.64,"NA",33560,625,34327,0.0182072421,33778,625,34542,0.0180939147,0.9317591977,22,22,"Artifact (15)"]
["UPN_Te4_009","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",21659,345,22094,0.0156150991,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",32.6,"NA",10791,172,11009,0.0156235807,10868,173,11085,0.0156066757,1,22,22,"Artifact (15)"]
["UPN_Te4_010","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",25336,369,25785,0.0143106457,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",32.7,"NA",12620,184,12844,0.0143257552,12716,185,12941,0.0142956495,1,22,22,"Artifact (15)"]
["UPN_Te4_011","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",24859,384,25349,0.0151485266,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",31.79,"NA",12339,188,12593,0.0149289288,12520,196,12756,0.0153653183,0.7973248161,22,22,"Artifact (15)"]
["UPN_Te4_012","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",19988,267,20315,0.0131429978,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",31.47,"NA",9949,134,10118,0.0132437241,10039,133,10197,0.0130430519,0.9020918668,22,22,"Artifact (15)"]
["UPN_Te4_013","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",5963,85,6079,0.0139825629,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",31.88,"NA",2962,43,3023,0.0142242805,3001,42,3056,0.0137434555,0.9132052273,22,22,"Artifact (15)"]
["UPN_Te4_014","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",26448,446,27031,0.0164995746,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",31.84,"NA",13122,221,13428,0.0164581472,13326,225,13603,0.016540469,1,22,22,"Artifact (15)"]
["UPN_Te4_015","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",36561,523,37273,0.0140316046,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",31.78,"NA",18134,259,18517,0.0139871469,18427,264,18756,0.0140754958,1,22,22,"Artifact (15)"]
["UPN_Te4_016","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",37360,604,38142,0.0158355618,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",31.75,"NA",18555,300,18958,0.0158244541,18805,304,19184,0.0158465388,1,22,22,"Artifact (15)"]
["UPN_Te4_017","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",20753,295,21129,0.0139618534,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",31.34,"NA",10331,148,10526,0.0140604218,10422,147,10603,0.0138640008,0.906757095,22,22,"Artifact (15)"]
["UPN_Te4_018","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",48287,725,49231,0.0147264935,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",31.84,"NA",23979,361,24475,0.0147497446,24308,364,24756,0.0147035062,0.9701554334,22,22,"Artifact (15)"]
["UPN_Te4_019","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",9126,112,9273,0.0120780761,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",31.39,"NA",4544,56,4622,0.0121159671,4582,56,4651,0.0120404214,1,22,22,"Artifact (15)"]
["UPN_Te4_020","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",16500,236,16791,0.0140551486,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",31.41,"NA",8208,117,8364,0.0139885222,8292,119,8427,0.0141212768,1,22,22,"Artifact (15)"]
["UPN_Te4_021","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",38010,475,38616,0.0123006008,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",31.41,"NA",18925,237,19242,0.012316807,19085,238,19374,0.012284505,1,22,22,"Artifact (15)"]
["UPN_Te4_022","X",129159221,"TGAG","T","BCORL1","ENST00000540052","disruptive_inframe_deletion","gaggaa/gaa|p.Glu1320del/c.3957_3959delGGA",14113,154,14322,0.0107526882,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO",2.471E-005,"NO","NO",-0.8,"Tolerated",31.46,"NA",7025,77,7133,0.010794897,7088,77,7189,0.0107108082,1,22,22,"Artifact (15)"]
["UPN_Te4_002","X",129162806,"G","C","BCORL1","ENST00000540052","missense_variant","aaG/aaC|p.Lys1425Asn/c.4275G>C",22544,348,22938,0.015171331415119,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.962,"Tolerated",32.8,30.8,9327,11,9360,0.00117521367521368,13217,337,13578,0.0248195610546472,2,9,9,"Artifact (6)"]
["UPN_Te4_003","X",129162806,"G","C","BCORL1","ENST00000540052","missense_variant","aaG/aaC|p.Lys1425Asn/c.4275G>C",15743,232,16031,0.0144719605763833,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.962,"Tolerated",32.78,30.72,6783,12,6827,0.00175772667350227,8960,220,9204,0.0239026510212951,2,9,9,"Artifact (6)"]
["UPN_Te4_004","X",129162806,"G","C","BCORL1","ENST00000540052","missense_variant","aaG/aaC|p.Lys1425Asn/c.4275G>C",16545,297,16888,0.017586451918522,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.962,"Tolerated",32.77,31.62,6578,4,6597,0.000606336213430347,9967,293,10291,0.0284714799339228,2,9,9,"Artifact (5)"]
["UPN_Te4_005","X",129162806,"G","C","BCORL1","ENST00000540052","missense_variant","aaG/aaC|p.Lys1425Asn/c.4275G>C",23459,369,23908,0.0154341642964698,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.962,"Tolerated",32.8,30.92,9658,14,9698,0.00144359661785935,13801,355,14210,0.0249824067558058,2,9,9,"Artifact (5)"]
["UPN_Te4_006","X",129162806,"G","C","BCORL1","ENST00000540052","missense_variant","aaG/aaC|p.Lys1425Asn/c.4275G>C",22293,311,22685,0.0137094996693851,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.962,"Tolerated",32.79,31.32,9286,6,9318,0.000643915003219575,13007,305,13367,0.0228173861000973,2,9,9,"Artifact (5)"]
["UPN_Te4_007","X",129162806,"G","C","BCORL1","ENST00000540052","missense_variant","aaG/aaC|p.Lys1425Asn/c.4275G>C",13810,251,14096,0.0178064699205448,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.962,"Tolerated",32.73,30.69,5569,11,5607,0.00196183342250758,8241,240,8489,0.0282718812580987,2,9,9,"Artifact (6)"]
["UPN_Te4_008","X",129162806,"G","C","BCORL1","ENST00000540052","missense_variant","aaG/aaC|p.Lys1425Asn/c.4275G>C",28201,567,28844,0.0196574677575926,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.962,"Tolerated",32.63,31.17,10207,15,10245,0.00146412884333821,17994,552,18599,0.0296790150008065,2,9,9,"Artifact (5)"]
["UPN_Te4_009","X",129162806,"G","C","BCORL1","ENST00000540052","missense_variant","aaG/aaC|p.Lys1425Asn/c.4275G>C",10701,182,10923,0.016662089169642,0,0,0,0,1,1,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.962,"Tolerated",32.87,31.14,4754,5,4766,0.00104909777591272,5947,177,6157,0.0287477667695306,2,9,9,"Artifact (5)"]
["UPN_Te4_010","X",129162806,"G","C","BCORL1","ENST00000540052","missense_variant","aaG/aaC|p.Lys1425Asn/c.4275G>C",13509,237,13767,0.0172150795380257,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.962,"Tolerated",32.77,30.87,5792,10,5815,0.00171969045571797,7717,227,7952,0.028546277665996,2,9,9,"Artifact (6)"]
["UPN_Te4_010","X",129171456,"A","T","BCORL1","ENST00000540052","missense_variant","Atc/Ttc|p.Ile1474Phe/c.4420A>T",16038,181,16314,0.0110947652323158,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.764,"Tolerated",31.44,26.2,8138,57,8231,0.00692503948487426,7900,124,8083,0.0153408387974762,2.70912125017288E-007,1,1,"Artifact (2)"]
["UPN_Te4_011","X",129171466,"A","G","BCORL1","ENST00000540052","missense_variant","gAg/gGg|p.Glu1477Gly/c.4430A>G",15535,166,16529,0.0100429548067034,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.572,"Deleterious",25.08,18.27,7364,141,8282,0.0170248732190292,8171,25,8247,0.00303140535952468,2.02633874834424E-023,5,5,"Artifact (5)"]
["UPN_Te4_013","X",129171466,"A","G","BCORL1","ENST00000540052","missense_variant","gAg/gGg|p.Glu1477Gly/c.4430A>G",4144,53,4403,0.012037247331365,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.572,"Deleterious",25.1,19.57,1981,43,2208,0.0194746376811594,2163,10,2195,0.00455580865603645,1.07968546576869E-006,5,5,"Artifact (5)"]
["UPN_Te4_015","X",129171466,"A","G","BCORL1","ENST00000540052","missense_variant","gAg/gGg|p.Glu1477Gly/c.4430A>G",20728,293,22092,0.0132627195364838,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.572,"Deleterious",25.04,18.93,9860,243,11089,0.0219136080800794,10868,50,11003,0.00454421521403254,1.40452976546591E-035,5,5,"Artifact (5)"]
["UPN_Te4_016","X",129171466,"A","G","BCORL1","ENST00000540052","missense_variant","gAg/gGg|p.Glu1477Gly/c.4430A>G",24423,288,25938,0.0111034004163775,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.572,"Deleterious",24.92,19.92,11699,230,13047,0.0176285736184564,12724,58,12891,0.00449926305174153,1.71598082254995E-028,5,5,"Artifact (5)"]
["UPN_Te4_018","X",129171466,"A","G","BCORL1","ENST00000540052","missense_variant","gAg/gGg|p.Glu1477Gly/c.4430A>G",31203,357,33207,0.0107507453247809,0,0,0,0,1,0,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-4.572,"Deleterious",24.94,18.42,14807,303,16645,0.0182036647641935,16396,54,16562,0.00326047578794832,2.10546453823573E-048,5,5,"Artifact (5)"]
["UPN_Te4_014","X",129185893,"A","T","BCORL1","ENST00000540052","missense_variant","caA/caT|p.Gln1585His/c.4755A>T",2093,23,2124,0.0108286252354049,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.845,"Tolerated",35.26,34.48,2093,23,2124,0.0108286252354049,0,0,0,"NA",1,1,1,"Artifact (1)"]
["UPN_Te4_019","X",129185942,"G","A","BCORL1","ENST00000540052","missense_variant","Gac/Aac|p.Asp1602Asn/c.4804G>A",1975,27,2003,0.0134797803295057,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-2.947,"Deleterious",34.01,33.59,993,14,1008,0.0138888888888889,982,13,995,0.0130653266331658,1,1,1,"Artifact (1)"]
["UPN_Te4_001","X",129189848,"T","C","BCORL1","ENST00000540052","missense_variant","Ttt/Ctt|p.Phe1625Leu/c.4873T>C",12346,133,12527,0.0106170671349884,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",1.766,"Tolerated",35.08,34.95,12346,133,12527,0.0106170671349884,0,0,0,"NA",1,9,9,"Artifact (4)"]
["UPN_Te4_009","X",129189848,"T","C","BCORL1","ENST00000540052","missense_variant","Ttt/Ctt|p.Phe1625Leu/c.4873T>C",9471,107,9615,0.0111284451378055,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",1.766,"Tolerated",35.07,35.57,9471,107,9615,0.0111284451378055,0,0,0,"NA",1,9,9,"Artifact (4)"]
["UPN_Te4_010","X",129189848,"T","C","BCORL1","ENST00000540052","missense_variant","Ttt/Ctt|p.Phe1625Leu/c.4873T>C",11009,119,11200,0.010625,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",1.766,"Tolerated",35.06,35.07,11008,119,11199,0.0106259487454237,1,0,1,0,1,9,9,"Artifact (4)"]
["UPN_Te4_011","X",129189848,"T","C","BCORL1","ENST00000540052","missense_variant","Ttt/Ctt|p.Phe1625Leu/c.4873T>C",12119,136,12306,0.0110515195839428,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",1.766,"Tolerated",35.11,34.39,12119,136,12306,0.0110515195839428,0,0,0,"NA",1,9,9,"Artifact (4)"]
["UPN_Te4_012","X",129189848,"T","C","BCORL1","ENST00000540052","missense_variant","Ttt/Ctt|p.Phe1625Leu/c.4873T>C",8234,87,8355,0.0104129263913824,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",1.766,"Tolerated",35.52,35.36,8230,87,8350,0.0104191616766467,4,0,5,0,1,9,9,"Artifact (4)"]
["UPN_Te4_013","X",129189848,"T","C","BCORL1","ENST00000540052","missense_variant","Ttt/Ctt|p.Phe1625Leu/c.4873T>C",3263,35,3311,0.0105708245243129,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",1.766,"Tolerated",35.22,34.86,3263,35,3311,0.0105708245243129,0,0,0,"NA",1,9,9,"Artifact (4)"]
["UPN_Te4_014","X",129189848,"T","C","BCORL1","ENST00000540052","missense_variant","Ttt/Ctt|p.Phe1625Leu/c.4873T>C",13760,158,13989,0.0112945886053328,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",1.766,"Tolerated",35.21,34.46,13760,158,13989,0.0112945886053328,0,0,0,"NA",1,9,9,"Artifact (4)"]
["UPN_Te4_016","X",129189848,"T","C","BCORL1","ENST00000540052","missense_variant","Ttt/Ctt|p.Phe1625Leu/c.4873T>C",18562,222,18856,0.0117734408145948,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",1.766,"Tolerated",35.2,34.52,18562,222,18856,0.0117734408145948,0,0,0,"NA",1,9,9,"Artifact (4)"]
["UPN_Te4_018","X",129189848,"T","C","BCORL1","ENST00000540052","missense_variant","Ttt/Ctt|p.Phe1625Leu/c.4873T>C",24707,263,25067,0.0104918817568915,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",1.766,"Tolerated",35.07,34.67,24707,263,25067,0.0104918817568915,0,0,0,"NA",1,9,9,"Artifact (4)"]
["UPN_Te4_001","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",12237,137,12319,0.0111210325513435,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.57,"NA",0,0,0,"NA",12237,137,12319,0.0111210325513435,1,22,44,"Artifact (10)"]
["UPN_Te4_002","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",20434,332,20557,0.016150216471275,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.72,"NA",0,0,0,"NA",20434,332,20557,0.016150216471275,1,22,44,"Artifact (10)"]
["UPN_Te4_003","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",15011,240,15130,0.015862524785195,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.65,"NA",0,0,1,0,15011,240,15129,0.015863573269879,1,22,44,"Artifact (10)"]
["UPN_Te4_004","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",14956,254,15069,0.0168557966686575,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.57,"NA",0,0,0,"NA",14956,254,15069,0.0168557966686575,1,22,44,"Artifact (10)"]
["UPN_Te4_005","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",20310,310,20454,0.0151559597144813,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.57,"NA",0,0,0,"NA",20310,310,20454,0.0151559597144813,1,22,44,"Artifact (10)"]
["UPN_Te4_006","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",19789,349,19929,0.0175121681970997,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.51,"NA",0,0,1,0,19789,349,19928,0.0175130469690887,1,22,44,"Artifact (10)"]
["UPN_Te4_007","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",11851,180,11928,0.0150905432595573,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.7,"NA",0,0,0,"NA",11851,180,11928,0.0150905432595573,1,22,44,"Artifact (10)"]
["UPN_Te4_008","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",28271,456,28496,0.0160022459292532,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.66,"NA",0,0,0,"NA",28271,456,28496,0.0160022459292532,1,22,44,"Artifact (10)"]
["UPN_Te4_009","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",9400,171,9470,0.0180570221752904,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.62,"NA",0,0,0,"NA",9400,171,9470,0.0180570221752904,1,22,44,"Artifact (10)"]
["UPN_Te4_010","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",10972,167,11050,0.0151131221719457,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.59,"NA",0,0,0,"NA",10972,167,11050,0.0151131221719457,1,22,44,"Artifact (10)"]
["UPN_Te4_011","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",12003,202,12125,0.016659793814433,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.54,"NA",0,0,0,"NA",12003,202,12125,0.016659793814433,1,22,44,"Artifact (10)"]
["UPN_Te4_012","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",8188,118,8242,0.0143169133705411,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.27,"NA",0,0,0,"NA",8188,118,8242,0.0143169133705411,1,22,44,"Artifact (10)"]
["UPN_Te4_013","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",3234,50,3255,0.0153609831029186,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.49,"NA",0,0,0,"NA",3234,50,3255,0.0153609831029186,1,22,44,"Artifact (10)"]
["UPN_Te4_014","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",13649,181,13758,0.0131559819741241,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.58,"NA",0,0,0,"NA",13649,181,13758,0.0131559819741241,1,22,44,"Artifact (10)"]
["UPN_Te4_015","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",18239,226,18397,0.01228461162146,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.52,"NA",0,0,0,"NA",18239,226,18397,0.01228461162146,1,22,44,"Artifact (10)"]
["UPN_Te4_016","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",18342,233,18539,0.012568099681752,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.51,"NA",0,0,0,"NA",18342,233,18539,0.012568099681752,1,22,44,"Artifact (10)"]
["UPN_Te4_017","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",7424,111,7468,0.0148634172469202,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.32,"NA",0,0,0,"NA",7424,111,7468,0.0148634172469202,1,22,44,"Artifact (10)"]
["UPN_Te4_018","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",24460,357,24684,0.0144628099173554,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.51,"NA",0,0,0,"NA",24460,357,24684,0.0144628099173554,1,22,44,"Artifact (10)"]
["UPN_Te4_019","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",3674,47,3701,0.0126992704674412,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.25,"NA",3,0,3,0,3671,47,3698,0.0127095727420227,1,22,44,"Artifact (10)"]
["UPN_Te4_020","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",6786,101,6838,0.0147704007019596,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.24,"NA",0,0,0,"NA",6786,101,6838,0.0147704007019596,1,22,44,"Artifact (10)"]
["UPN_Te4_021","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",16167,246,16256,0.015132874015748,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.24,"NA",0,0,0,"NA",16167,246,16256,0.015132874015748,1,22,44,"Artifact (10)"]
["UPN_Te4_022","X",129190010,"T","TC","BCORL1","ENST00000540052","frameshift_variant","cca/ccCa|p.Gly1682fs/c.5042dupC",5991,89,6025,0.0147717842323651,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",35.24,"NA",0,0,0,"NA",5991,89,6025,0.0147717842323651,1,22,44,"Artifact (10)"]
["UPN_Te4_001","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",12024,236,12330,0.0191403081914031,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.6,"NA",1,0,1,0,12023,236,12329,0.0191418606537432,1,22,44,"Artifact (8)"]
["UPN_Te4_002","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",20164,323,20577,0.0156971375807941,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.99,"NA",0,0,1,0,20164,323,20576,0.015697900466563,1,22,44,"Artifact (8)"]
["UPN_Te4_003","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",14815,271,15140,0.0178996036988111,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.99,"NA",2,0,4,0,14813,271,15136,0.017904334038055,1,22,44,"Artifact (8)"]
["UPN_Te4_004","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",14776,256,15080,0.0169761273209549,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.93,"NA",0,0,1,0,14776,256,15079,0.0169772531334969,1,22,44,"Artifact (8)"]
["UPN_Te4_005","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",20019,361,20468,0.0176372874731288,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.96,"NA",0,0,2,0,20019,361,20466,0.017639011042705,1,22,44,"Artifact (8)"]
["UPN_Te4_006","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",19495,354,19942,0.0177514792899408,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.98,"NA",1,0,1,0,19494,354,19941,0.0177523694899955,1,22,44,"Artifact (8)"]
["UPN_Te4_007","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",11693,186,11933,0.0155870275706025,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",35.02,"NA",0,0,0,"NA",11693,186,11933,0.0155870275706025,1,22,44,"Artifact (8)"]
["UPN_Te4_008","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",27934,479,28512,0.0167999438832772,1,0,0,0,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",35.02,"NA",0,0,2,0,27934,479,28510,0.0168011224131884,1,22,44,"Artifact (8)"]
["UPN_Te4_009","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",9271,170,9483,0.0179268164083096,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.96,"NA",0,0,2,0,9271,170,9481,0.0179305980381816,1,22,44,"Artifact (8)"]
["UPN_Te4_010","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",10819,174,11061,0.0157309465690263,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",35.06,"NA",0,0,1,0,10819,174,11060,0.0157323688969259,1,22,44,"Artifact (8)"]
["UPN_Te4_011","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",11803,246,12129,0.0202819688350235,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.46,"NA",1,0,1,0,11802,246,12128,0.0202836411609499,1,22,44,"Artifact (6)"]
["UPN_Te4_012","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",8075,134,8246,0.0162503031772981,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.89,"NA",1,0,1,0,8074,134,8245,0.0162522741055185,1,22,44,"Artifact (8)"]
["UPN_Te4_013","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",3177,54,3254,0.0165949600491703,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.59,"NA",0,0,0,"NA",3177,54,3254,0.0165949600491703,1,22,44,"Artifact (8)"]
["UPN_Te4_014","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",13407,254,13763,0.0184552786456441,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.55,"NA",0,0,1,0,13407,254,13762,0.0184566196773725,1,22,44,"Artifact (8)"]
["UPN_Te4_015","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",17925,348,18410,0.0189027702335687,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.49,"NA",2,0,2,0,17923,348,18408,0.0189048239895698,1,22,44,"Artifact (8)"]
["UPN_Te4_016","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",18120,314,18557,0.016920838497602,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.5,"NA",1,0,2,0,18119,314,18555,0.0169226623551603,1,22,44,"Artifact (8)"]
["UPN_Te4_017","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",7351,94,7477,0.0125718871205029,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.86,"NA",0,0,0,"NA",7351,94,7477,0.0125718871205029,1,22,44,"Artifact (8)"]
["UPN_Te4_018","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",24054,504,24703,0.0204023802776991,1,0,0,0,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.49,"NA",0,0,0,"NA",24054,504,24703,0.0204023802776991,1,22,44,"Artifact (6)"]
["UPN_Te4_019","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",3616,74,3704,0.0199784017278618,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.92,"NA",2,1,3,0.333333333333333,3614,73,3701,0.0197243988111321,0.058979817830865,22,44,"Artifact (8)"]
["UPN_Te4_020","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",6689,119,6844,0.0173874926943308,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.92,"NA",1,0,1,0,6688,119,6843,0.0173900336109893,1,22,44,"Artifact (8)"]
["UPN_Te4_021","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",15965,240,16265,0.0147556102059637,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.94,"NA",1,0,2,0,15964,240,16263,0.0147574248293673,1,22,44,"Artifact (8)"]
["UPN_Te4_022","X",129190010,"TC","T","BCORL1","ENST00000540052","frameshift_variant","cca/|p.Pro1681fs/c.5042delC",5898,112,6028,0.0185799601857996,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NA","NA","NO","NO","NO",1.647E-005,"NO","NO","NA","NA",34.93,"NA",0,0,0,"NA",5898,112,6028,0.0185799601857996,1,22,44,"Artifact (8)"]
["UPN_Te4_005","X",129190013,"C","G","BCORL1","ENST00000540052","missense_variant","Ccc/Gcc|p.Pro1680Ala/c.5038C>G",23193,258,23512,0.0109731201088806,0,0,0,0,0,1,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.682,"Tolerated",34.63,30.62,2780,245,3031,0.0808314087759815,20413,13,20481,0.000634734632098042,8.66340583240933E-202,2,2,"Artifact (5)"]
["UPN_Te4_008","X",129190013,"C","G","BCORL1","ENST00000540052","missense_variant","Ccc/Gcc|p.Pro1680Ala/c.5038C>G",32694,432,33187,0.0130171452677253,0,0,0,0,0,1,0,0,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-0.682,"Tolerated",34.62,30.58,4237,415,4659,0.0890749087787079,28457,17,28528,0.000595905776780707,0,2,2,"Artifact (5)"]
["UPN_Te4_001","X",129190080,"C","A","BCORL1","ENST00000540052","missense_variant","tCc/tAc|p.Ser1702Tyr/c.5105C>A",2096,38,2138,0.0177736202057998,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-4.043,"Deleterious",33.83,27.21,2096,38,2138,0.0177736202057998,0,0,0,"NA",1,1,1,"Artifact (0)"]
["UPN_Te4_001","X",133511668,"GA","G","PHF6","ENST00000332070","frameshift_variant","aaa/|p.Pro11fs/c.27delA",3607,44,3669,0.0119923684927773,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.64,"NA",3607,44,3669,0.0119923684927773,0,0,0,"NA",1,4,4,"Artifact (6)"]
["UPN_Te4_002","X",133511668,"GA","G","PHF6","ENST00000332070","frameshift_variant","aaa/|p.Pro11fs/c.27delA",5578,58,5654,0.0102582242660064,0,0,0,0,0,0,0,1,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.59,"NA",5578,58,5654,0.0102582242660064,0,0,0,"NA",1,4,4,"Artifact (7)"]
["UPN_Te4_003","X",133511668,"GA","G","PHF6","ENST00000332070","frameshift_variant","aaa/|p.Pro11fs/c.27delA",5202,54,5282,0.0102234002271867,0,0,0,0,1,0,0,1,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.65,"NA",5202,54,5282,0.0102234002271867,0,0,0,"NA",1,4,4,"Artifact (6)"]
["UPN_Te4_016","X",133511668,"GA","G","PHF6","ENST00000332070","frameshift_variant","aaa/|p.Pro11fs/c.27delA",4055,43,4112,0.0104571984435798,0,0,0,0,0,0,0,1,1,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO","NA","NA",35.7,"NA",4055,43,4112,0.0104571984435798,0,0,0,"NA",1,4,4,"Artifact (7)"]
["UPN_Te4_008","X",133511733,"GA","G","PHF6","ENST00000332070","frameshift_variant","gga/|p.Gln30fs/c.87delA",735,"NA",1172,"NA",1,0,0,0,0,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.54,"NA",372,"NA",604,"NA",363,"NA",568,"NA","NA",1,1,"Artifact (1)"]
["UPN_Te4_008","X",133511734,"ACAGTT","CTAG","PHF6","ENST00000332070","frameshift_variant+stop_gained","ggacagtta/ggCTAGa|p.Gln30fs/c.87_92delACAGTTinsCTAG",735,437,746,0.585790884718499,0,0,0,0,0,0,0,1,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.1166666666667,"ComplexIndel","NA","NA","NA","NA","NA","NA","NA","NA","NA",1,2,"Artifact (2)"]
["UPN_Te4_008","X",133511735,"CAGT","C","PHF6","ENST00000332070","disruptive_inframe_deletion","cagtta/cta|p.Gln30del/c.89_91delAGT",1165,"NA",1167,"NA",1,0,0,0,0,0,0,0,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-5.202,"Deleterious",34.7,"NA",601,"NA",602,"NA",564,"NA",565,"NA","NA",1,3,"Artifact (1)"]
["UPN_Te4_008","X",133511735,"CAGTTAC","TAGGG","PHF6","ENST00000332070","frameshift_variant+stop_gained","cagttacta/TAGGGta|p.Gln30fs/c.88_94delCAGTTACinsTAGGG",735,434,746,0.581769436997319,0,0,0,0,0,0,0,1,1,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",34.0428571428571,"ComplexIndel","NA","NA","NA","NA","NA","NA","NA","NA","NA",1,3,"Artifact (2)"]
["UPN_Te4_008","X",133511737,"GTT","G","PHF6","ENST00000332070","frameshift_variant","tta/|p.Leu31fs/c.91_92delTT",735,423,1169,0.361847733105218,0,1,0,0,0,1,0,0,2,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO","NA","NA",32.83,"NA",371,225,603,0.373134328358209,364,198,566,0.34982332155477,0.392843553443889,1,1,"Artifact (0)"]
["UPN_Te4_008","X",133511741,"C","G","PHF6","ENST00000332070","missense_variant","Cta/Gta|p.Leu32Val/c.94C>G",743,431,1177,0.366185216652506,1,1,0,0,0,1,0,0,3,"NO","NO","NO","NA","NA","NO","NO","NO","NO","NO","NO",-0.684,"Tolerated",33.65,34.09,376,228,607,0.375617792421746,367,203,570,0.356140350877193,0.467512212124825,1,1,"Artifact (0)"]
["UPN_Te4_007","X",133512129,"C","T","PHF6","ENST00000332070","missense_variant","aCg/aTg|p.Thr78Met/c.233C>T",4072,42,4128,0.0101744186046512,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO",1.648E-005,"NO","NO",-0.528,"Tolerated",34.01,35.71,4072,42,4128,0.0101744186046512,0,0,0,"NA",1,1,1,"Artifact (1)"]
["UPN_Te4_011","X",133547586,"A","G","PHF6","ENST00000332070","missense_variant","Agt/Ggt|p.Ser162Gly/c.484A>G",27468,301,27912,0.0107838922327314,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.23,"Tolerated",32.24,31.45,13965,156,14158,0.0110185054386213,13503,145,13754,0.0105423876690417,0.772022934753758,3,3,"Artifact (1)"]
["UPN_Te4_013","X",133547586,"A","G","PHF6","ENST00000332070","missense_variant","Agt/Ggt|p.Ser162Gly/c.484A>G",14478,148,14701,0.0100673423576627,0,0,0,1,1,0,0,0,2,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.23,"Tolerated",32.3,30.85,7374,79,7471,0.0105742203185651,7104,69,7230,0.00954356846473029,0.564073688347589,3,3,"Artifact (4)"]
["UPN_Te4_016","X",133547586,"A","G","PHF6","ENST00000332070","missense_variant","Agt/Ggt|p.Ser162Gly/c.484A>G",41633,435,42235,0.0102995146205754,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",0.23,"Tolerated",32.24,31.48,21123,227,21395,0.0106099555971021,20510,208,20840,0.00998080614203455,0.563166180725005,3,3,"Artifact (1)"]
["UPN_Te4_008","X",133549145,"A","G","PHF6","ENST00000332070","missense_variant","Aga/Gga|p.Arg277Gly/c.829A>G",7991,112,8118,0.0137965016013797,0,0,0,1,1,1,0,1,4,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.764,"Tolerated",34.83,32.36,4015,58,4077,0.0142261466764778,3976,54,4041,0.0133630289532294,0.775794642088415,1,1,"Artifact (0)"]
["UPN_Te4_007","X",133551242,"A","G","PHF6","ENST00000332070","missense_variant","gAa/gGa|p.Glu293Gly/c.878A>G",3769,48,3832,0.0125260960334029,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.149,"Tolerated",35.41,35,3769,48,3832,0.0125260960334029,0,0,0,"NA",1,2,2,"Artifact (2)"]
["UPN_Te4_010","X",133551242,"A","G","PHF6","ENST00000332070","missense_variant","gAa/gGa|p.Glu293Gly/c.878A>G",3904,50,3978,0.012569130216189,0,0,0,1,1,0,0,1,3,"NO","NO","NO","NO","O","NO","NO","NO","NO","NO","NO",-1.149,"Tolerated",35.53,34.6,3904,50,3978,0.012569130216189,0,0,0,"NA",1,2,2,"Artifact (2)"]
[{"$nulls":13},{"$f":"SUM(N2:N4722)","v":41},{"$f":"SUM(O2:O4722)","v":375},{"$f":"SUM(P2:P4722)","v":84},{"$f":"SUM(Q2:Q4722)","v":962},{"$f":"SUM(R2:R4722)","v":4570},{"$f":"SUM(S2:S4722)","v":1903},{"$f":"SUM(T2:T4722)","v":48},{"$f":"SUM(U2:U4722)","v":1613}]

{"sheet":"TN Mutations Filter 1","index":8,"n_rows":29266,"n_cols":47,"rows_kept":1125,"cut":true,"hidden":false,"merged":[],"bounds":{"rows_first":500,"rows_last":125,"rows_between":500,"halvings":2}}
["Sample","Chr","Pos","Ref","Alt","Gene","ENST","Type","Mutation","Nr_Ref","Nr_Alt","DP","VAF","GATK","Platypus","VarScan","LoFreq","FreeBayes","SNVer","SAMtools","VarDict","Called","ESP6500","G1000","Cosmic","Cosmic_location","Cosmic_occurence","dbSNP_SNPs","dbSNP_SNVs","PM_flag","ExAC","ClinVar_clinical","ClinVar_noimpact","Provean_Prediction","Provean_Score","BQ_Ref","BQ_Alt","Nr_Ref_fwd","Nr_Alt_fwd","DP_fwd","VAF_fwd","Nr_Ref_rev","Nr_Alt_rev","DP_rev","VAF_rev","bq","alignment"]
["UPN_Te4_001",1,36931959,"T","A","CSF3R","ENST00000373103","stop_lost","tAg/tTg|p.Ter864Leuext*?/c.2591A>T",13203,189,13477,0.0140238925576909,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.09,16.49,13203,189,13477,0.0140238925576909,0,0,0,"NA","low bq","NA"]
["UPN_Te4_002",1,36931959,"T","A","CSF3R","ENST00000373103","stop_lost","tAg/tTg|p.Ter864Leuext*?/c.2591A>T",11078,133,11262,0.0118096252885811,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.05,15.68,11077,133,11261,0.011810674007637,1,0,1,0,"low bq","NA"]
["UPN_Te4_003",1,36931959,"T","A","CSF3R","ENST00000373103","stop_lost","tAg/tTg|p.Ter864Leuext*?/c.2591A>T",7967,132,8137,0.0162221949121298,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.02,15.77,7966,132,8136,0.0162241887905605,1,0,1,0,"low bq","NA"]
["UPN_Te4_004",1,36931959,"T","A","CSF3R","ENST00000373103","stop_lost","tAg/tTg|p.Ter864Leuext*?/c.2591A>T",12373,164,12599,0.013016906103659,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.82,14.96,12373,164,12599,0.013016906103659,0,0,0,"NA","low bq","NA"]
["UPN_Te4_005",1,36931959,"T","A","CSF3R","ENST00000373103","stop_lost","tAg/tTg|p.Ter864Leuext*?/c.2591A>T",11676,161,11899,0.0135305487856122,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.11,14.56,11676,161,11899,0.0135305487856122,0,0,0,"NA","low bq","NA"]
["UPN_Te4_006",1,36931959,"T","A","CSF3R","ENST00000373103","stop_lost","tAg/tTg|p.Ter864Leuext*?/c.2591A>T",11487,168,11723,0.0143308026955557,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.74,17.56,11487,168,11723,0.0143308026955557,0,0,0,"NA","low bq","NA"]
["UPN_Te4_007",1,36931959,"T","A","CSF3R","ENST00000373103","stop_lost","tAg/tTg|p.Ter864Leuext*?/c.2591A>T",13341,182,13587,0.0133951571354972,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.17,14.72,13341,182,13587,0.0133951571354972,0,0,0,"NA","low bq","NA"]
["UPN_Te4_008",1,36931959,"T","A","CSF3R","ENST00000373103","stop_lost","tAg/tTg|p.Ter864Leuext*?/c.2591A>T",16853,231,17174,0.0134505648072668,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.1,15.14,16853,231,17174,0.0134505648072668,0,0,0,"NA","low bq","NA"]
["UPN_Te4_009",1,36931959,"T","A","CSF3R","ENST00000373103","stop_lost","tAg/tTg|p.Ter864Leuext*?/c.2591A>T",5852,64,5952,0.010752688172043,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.77,14.69,5852,64,5952,0.010752688172043,0,0,0,"NA","low bq","NA"]
["UPN_Te4_010",1,36931959,"T","A","CSF3R","ENST00000373103","stop_lost","tAg/tTg|p.Ter864Leuext*?/c.2591A>T",12159,160,12398,0.0129053073076303,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.72,15.43,12159,160,12398,0.0129053073076303,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",1,36931959,"T","A","CSF3R","ENST00000373103","stop_lost","tAg/tTg|p.Ter864Leuext*?/c.2591A>T",13144,212,13468,0.0157410157410157,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.19,15.55,13144,212,13468,0.0157410157410157,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",1,36931959,"T","A","CSF3R","ENST00000373103","stop_lost","tAg/tTg|p.Ter864Leuext*?/c.2591A>T",3527,54,3611,0.0149543062863473,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.25,15.65,3527,54,3611,0.0149543062863473,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",1,36931959,"T","A","CSF3R","ENST00000373103","stop_lost","tAg/tTg|p.Ter864Leuext*?/c.2591A>T",14436,227,14764,0.0153752370631265,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.38,16.81,14435,227,14763,0.0153762785341733,1,0,1,0,"low bq","NA"]
["UPN_Te4_015",1,36931959,"T","A","CSF3R","ENST00000373103","stop_lost","tAg/tTg|p.Ter864Leuext*?/c.2591A>T",10327,184,10583,0.017386374373996,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.39,15.34,10327,184,10583,0.017386374373996,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016",1,36931959,"T","A","CSF3R","ENST00000373103","stop_lost","tAg/tTg|p.Ter864Leuext*?/c.2591A>T",9999,169,10238,0.0165071302988865,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.26,17.29,9999,169,10238,0.0165071302988865,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",1,36931959,"T","A","CSF3R","ENST00000373103","stop_lost","tAg/tTg|p.Ter864Leuext*?/c.2591A>T",13275,176,13531,0.0130071687236716,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.11,15.96,13275,176,13531,0.0130071687236716,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",1,36931966,"T","A","CSF3R","ENST00000373103","missense_variant","Agc/Tgc|p.Ser862Cys/c.2584A>T",13253,162,13470,0.0120267260579065,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.1,16.44,13253,162,13470,0.0120267260579065,0,0,0,"NA","low bq","NA"]
["UPN_Te4_002",1,36931966,"T","A","CSF3R","ENST00000373103","missense_variant","Agc/Tgc|p.Ser862Cys/c.2584A>T",11076,138,11259,0.0122568611777245,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.01,14.97,11075,138,11258,0.0122579499022917,1,0,1,0,"low bq","NA"]
["UPN_Te4_003",1,36931966,"T","A","CSF3R","ENST00000373103","missense_variant","Agc/Tgc|p.Ser862Cys/c.2584A>T",7993,108,8134,0.0132776001967052,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.8,16.06,7992,108,8133,0.0132792327554408,1,0,1,0,"low bq","NA"]
["UPN_Te4_004",1,36931966,"T","A","CSF3R","ENST00000373103","missense_variant","Agc/Tgc|p.Ser862Cys/c.2584A>T",12381,167,12595,0.0132592298531163,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.95,16.72,12381,167,12595,0.0132592298531163,0,0,0,"NA","low bq","NA"]
["UPN_Te4_005",1,36931966,"T","A","CSF3R","ENST00000373103","missense_variant","Agc/Tgc|p.Ser862Cys/c.2584A>T",11728,130,11900,0.0109243697478992,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.82,15.29,11728,130,11900,0.0109243697478992,0,0,0,"NA","low bq","NA"]
["UPN_Te4_006",1,36931966,"T","A","CSF3R","ENST00000373103","missense_variant","Agc/Tgc|p.Ser862Cys/c.2584A>T",11506,157,11716,0.0134004779788324,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.88,15.34,11506,157,11716,0.0134004779788324,0,0,0,"NA","low bq","NA"]
["UPN_Te4_007",1,36931966,"T","A","CSF3R","ENST00000373103","missense_variant","Agc/Tgc|p.Ser862Cys/c.2584A>T",13386,157,13584,0.011557714958775,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.93,15.77,13386,157,13584,0.011557714958775,0,0,0,"NA","low bq","NA"]
["UPN_Te4_008",1,36931966,"T","A","CSF3R","ENST00000373103","missense_variant","Agc/Tgc|p.Ser862Cys/c.2584A>T",16904,209,17173,0.0121702672800326,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.91,15.38,16904,209,17173,0.0121702672800326,0,0,0,"NA","low bq","NA"]
["UPN_Te4_009",1,36931966,"T","A","CSF3R","ENST00000373103","missense_variant","Agc/Tgc|p.Ser862Cys/c.2584A>T",5873,62,5950,0.0104201680672269,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.9,14.92,5873,62,5950,0.0104201680672269,0,0,0,"NA","low bq","NA"]
["UPN_Te4_010",1,36931966,"T","A","CSF3R","ENST00000373103","missense_variant","Agc/Tgc|p.Ser862Cys/c.2584A>T",12161,153,12395,0.0123436869705526,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.89,15.89,12161,153,12395,0.0123436869705526,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",1,36931966,"T","A","CSF3R","ENST00000373103","missense_variant","Agc/Tgc|p.Ser862Cys/c.2584A>T",13204,197,13460,0.0146359583952452,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.08,18.13,13204,197,13460,0.0146359583952452,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",1,36931966,"T","A","CSF3R","ENST00000373103","missense_variant","Agc/Tgc|p.Ser862Cys/c.2584A>T",3529,63,3609,0.0174563591022444,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.97,15.59,3529,63,3609,0.0174563591022444,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",1,36931966,"T","A","CSF3R","ENST00000373103","missense_variant","Agc/Tgc|p.Ser862Cys/c.2584A>T",14470,229,14757,0.01551805922613,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.11,16.9,14469,229,14756,0.0155191108701545,1,0,1,0,"low bq","NA"]
["UPN_Te4_015",1,36931966,"T","A","CSF3R","ENST00000373103","missense_variant","Agc/Tgc|p.Ser862Cys/c.2584A>T",10362,162,10578,0.0153148043108338,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.07,17.43,10362,162,10578,0.0153148043108338,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016",1,36931966,"T","A","CSF3R","ENST00000373103","missense_variant","Agc/Tgc|p.Ser862Cys/c.2584A>T",10048,149,10232,0.0145621579358874,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.09,15.91,10048,149,10232,0.0145621579358874,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",1,36931966,"T","A","CSF3R","ENST00000373103","missense_variant","Agc/Tgc|p.Ser862Cys/c.2584A>T",13284,182,13528,0.0134535777646363,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.11,16.01,13284,182,13528,0.0134535777646363,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",1,36931971,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu860Arg/c.2579T>G",13159,216,13464,0.0160427807486631,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.38,15.42,13159,216,13464,0.0160427807486631,0,0,0,"NA","low bq","NA"]
["UPN_Te4_002",1,36931971,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu860Arg/c.2579T>G",11048,162,11256,0.0143923240938166,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.99,15.47,11047,162,11255,0.0143936028431808,1,0,1,0,"low bq","NA"]
["UPN_Te4_003",1,36931971,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu860Arg/c.2579T>G",7951,147,8130,0.0180811808118081,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.08,14.54,7950,147,8129,0.0180834050928774,1,0,1,0,"low bq","NA"]
["UPN_Te4_004",1,36931971,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu860Arg/c.2579T>G",12343,205,12594,0.0162775925043672,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.58,15.9,12343,205,12594,0.0162775925043672,0,0,0,"NA","low bq","NA"]
["UPN_Te4_005",1,36931971,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu860Arg/c.2579T>G",11684,173,11900,0.0145378151260504,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.75,15.08,11684,173,11900,0.0145378151260504,0,0,0,"NA","low bq","NA"]
["UPN_Te4_006",1,36931971,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu860Arg/c.2579T>G",11488,184,11711,0.015711724020152,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.62,15.57,11488,184,11711,0.015711724020152,0,0,0,"NA","low bq","NA"]
["UPN_Te4_007",1,36931971,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu860Arg/c.2579T>G",13328,185,13580,0.0136229749631811,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.89,15.48,13328,185,13580,0.0136229749631811,0,0,0,"NA","low bq","NA"]
["UPN_Te4_008",1,36931971,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu860Arg/c.2579T>G",16832,263,17170,0.0153174140943506,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.93,15.54,16832,263,17170,0.0153174140943506,0,0,0,"NA","low bq","NA"]
["UPN_Te4_009",1,36931971,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu860Arg/c.2579T>G",5859,69,5947,0.0116024886497394,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.47,15.45,5859,69,5947,0.0116024886497394,0,0,0,"NA","low bq","NA"]
["UPN_Te4_010",1,36931971,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu860Arg/c.2579T>G",12145,194,12395,0.0156514723678903,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.44,15.37,12145,194,12395,0.0156514723678903,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",1,36931971,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu860Arg/c.2579T>G",13189,204,13456,0.0151605231866825,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.56,15.75,13189,204,13456,0.0151605231866825,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",1,36931971,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu860Arg/c.2579T>G",3527,63,3607,0.0174660382589409,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.46,15.92,3527,63,3607,0.0174660382589409,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",1,36931971,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu860Arg/c.2579T>G",14456,218,14753,0.0147766555954721,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.49,15.08,14455,218,14752,0.0147776572668113,1,0,1,0,"low bq","NA"]
["UPN_Te4_015",1,36931971,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu860Arg/c.2579T>G",10375,142,10577,0.0134253569064952,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.76,15.93,10375,142,10577,0.0134253569064952,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016",1,36931971,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu860Arg/c.2579T>G",10015,175,10229,0.0171082217225535,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.78,15.42,10015,175,10229,0.0171082217225535,0,0,0,"NA","low bq","NA"]
["UPN_Te4_017",1,36931971,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu860Arg/c.2579T>G",5474,61,5551,0.010989010989011,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.4,15.8,5474,61,5551,0.010989010989011,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",1,36931971,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu860Arg/c.2579T>G",13264,203,13525,0.0150092421441774,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.42,15.83,13264,203,13525,0.0150092421441774,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",1,36931977,"T","A","CSF3R","ENST00000373103","missense_variant","gAg/gTg|p.Glu858Val/c.2573A>T",13150,209,13442,0.0155482815057283,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.09,15.56,13150,209,13442,0.0155482815057283,0,0,0,"NA","low bq","NA"]
["UPN_Te4_002",1,36931977,"T","A","CSF3R","ENST00000373103","missense_variant","gAg/gTg|p.Glu858Val/c.2573A>T",10996,180,11245,0.0160071142730102,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.33,14.84,10995,180,11244,0.016008537886873,1,0,1,0,"low bq","NA"]
["UPN_Te4_003",1,36931977,"T","A","CSF3R","ENST00000373103","missense_variant","gAg/gTg|p.Glu858Val/c.2573A>T",7921,158,8125,0.0194461538461538,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.15,15.09,7920,158,8124,0.0194485475135401,1,0,1,0,"low bq","NA"]
["UPN_Te4_004",1,36931977,"T","A","CSF3R","ENST00000373103","missense_variant","gAg/gTg|p.Glu858Val/c.2573A>T",12325,191,12579,0.0151840368868749,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.12,15.21,12325,191,12579,0.0151840368868749,0,0,0,"NA","low bq","NA"]
["UPN_Te4_005",1,36931977,"T","A","CSF3R","ENST00000373103","missense_variant","gAg/gTg|p.Glu858Val/c.2573A>T",11605,212,11888,0.0178331090174966,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.23,14.57,11605,212,11888,0.0178331090174966,0,0,0,"NA","low bq","NA"]
["UPN_Te4_006",1,36931977,"T","A","CSF3R","ENST00000373103","missense_variant","gAg/gTg|p.Glu858Val/c.2573A>T",11426,192,11697,0.0164144652474994,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.99,14.64,11426,192,11697,0.0164144652474994,0,0,0,"NA","low bq","NA"]
["UPN_Te4_007",1,36931977,"T","A","CSF3R","ENST00000373103","missense_variant","gAg/gTg|p.Glu858Val/c.2573A>T",13237,256,13569,0.0188665340113494,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.27,14.86,13237,256,13569,0.0188665340113494,0,0,0,"NA","low bq","NA"]
["UPN_Te4_008",1,36931977,"T","A","CSF3R","ENST00000373103","missense_variant","gAg/gTg|p.Glu858Val/c.2573A>T",16724,312,17160,0.0181818181818182,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.33,14.71,16724,312,17160,0.0181818181818182,0,0,0,"NA","low bq","NA"]
["UPN_Te4_009",1,36931977,"T","A","CSF3R","ENST00000373103","missense_variant","gAg/gTg|p.Glu858Val/c.2573A>T",5812,100,5945,0.0168208578637511,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.89,14.83,5812,100,5945,0.0168208578637511,0,0,0,"NA","low bq","NA"]
["UPN_Te4_010",1,36931977,"T","A","CSF3R","ENST00000373103","missense_variant","gAg/gTg|p.Glu858Val/c.2573A>T",12097,211,12388,0.01703261220536,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.83,14.61,12097,211,12388,0.01703261220536,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",1,36931977,"T","A","CSF3R","ENST00000373103","missense_variant","gAg/gTg|p.Glu858Val/c.2573A>T",13125,228,13431,0.0169756533392897,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.07,15.71,13125,228,13431,0.0169756533392897,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",1,36931977,"T","A","CSF3R","ENST00000373103","missense_variant","gAg/gTg|p.Glu858Val/c.2573A>T",3508,72,3601,0.0199944459872258,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.22,17.32,3508,72,3601,0.0199944459872258,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",1,36931977,"T","A","CSF3R","ENST00000373103","missense_variant","gAg/gTg|p.Glu858Val/c.2573A>T",14359,275,14742,0.018654185320852,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.25,15.61,14358,275,14741,0.0186554507835289,1,0,1,0,"low bq","NA"]
["UPN_Te4_015",1,36931977,"T","A","CSF3R","ENST00000373103","missense_variant","gAg/gTg|p.Glu858Val/c.2573A>T",10301,198,10568,0.0187358062074186,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.18,15.5,10301,198,10568,0.0187358062074186,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016",1,36931977,"T","A","CSF3R","ENST00000373103","missense_variant","gAg/gTg|p.Glu858Val/c.2573A>T",9969,181,10218,0.0177138383245253,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.12,15.83,9969,181,10218,0.0177138383245253,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",1,36931977,"T","A","CSF3R","ENST00000373103","missense_variant","gAg/gTg|p.Glu858Val/c.2573A>T",13182,244,13509,0.0180620327189281,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.28,15.61,13182,244,13509,0.0180620327189281,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",1,36931980,"A","C","CSF3R","ENST00000373103","missense_variant","aTg/aGg|p.Met857Arg/c.2570T>G",13214,173,13440,0.0128720238095238,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.54,14.64,13214,173,13440,0.0128720238095238,0,0,0,"NA","low bq","NA"]
["UPN_Te4_002",1,36931980,"A","C","CSF3R","ENST00000373103","missense_variant","aTg/aGg|p.Met857Arg/c.2570T>G",11092,136,11244,0.0120953397367485,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.48,14.1,11092,135,11243,0.0120074713154852,0,1,1,1,"low bq","NA"]
["UPN_Te4_003",1,36931980,"A","C","CSF3R","ENST00000373103","missense_variant","aTg/aGg|p.Met857Arg/c.2570T>G",8013,93,8125,0.0114461538461538,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.55,14,8012,93,8124,0.0114475627769572,1,0,1,0,"low bq","NA"]
["UPN_Te4_004",1,36931980,"A","C","CSF3R","ENST00000373103","missense_variant","aTg/aGg|p.Met857Arg/c.2570T>G",12397,129,12578,0.0102560025441247,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.15,14.43,12397,129,12578,0.0102560025441247,0,0,0,"NA","low bq","NA"]
["UPN_Te4_005",1,36931980,"A","C","CSF3R","ENST00000373103","missense_variant","aTg/aGg|p.Met857Arg/c.2570T>G",11695,135,11888,0.0113559892328398,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.24,14.72,11695,135,11888,0.0113559892328398,0,0,0,"NA","low bq","NA"]
["UPN_Te4_006",1,36931980,"A","C","CSF3R","ENST00000373103","missense_variant","aTg/aGg|p.Met857Arg/c.2570T>G",11521,143,11696,0.0122264021887825,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.16,14.53,11521,143,11696,0.0122264021887825,0,0,0,"NA","low bq","NA"]
["UPN_Te4_007",1,36931980,"A","C","CSF3R","ENST00000373103","missense_variant","aTg/aGg|p.Met857Arg/c.2570T>G",13399,140,13568,0.0103183962264151,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.52,14.94,13399,140,13568,0.0103183962264151,0,0,0,"NA","low bq","NA"]
["UPN_Te4_009",1,36931980,"A","C","CSF3R","ENST00000373103","missense_variant","aTg/aGg|p.Met857Arg/c.2570T>G",5864,64,5944,0.0107671601615074,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.96,14.31,5864,64,5944,0.0107671601615074,0,0,0,"NA","low bq","NA"]
["UPN_Te4_010",1,36931980,"A","C","CSF3R","ENST00000373103","missense_variant","aTg/aGg|p.Met857Arg/c.2570T>G",12217,142,12388,0.0114627058443655,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.79,14.36,12217,142,12388,0.0114627058443655,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",1,36931980,"A","C","CSF3R","ENST00000373103","missense_variant","aTg/aGg|p.Met857Arg/c.2570T>G",13213,160,13428,0.011915400655347,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.24,14.77,13213,160,13428,0.011915400655347,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",1,36931980,"A","C","CSF3R","ENST00000373103","missense_variant","aTg/aGg|p.Met857Arg/c.2570T>G",3535,43,3601,0.0119411274645932,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.2,14.67,3535,43,3601,0.0119411274645932,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",1,36931980,"A","C","CSF3R","ENST00000373103","missense_variant","aTg/aGg|p.Met857Arg/c.2570T>G",14485,188,14741,0.0127535445356489,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.38,15.42,14484,188,14740,0.0127544097693351,1,0,1,0,"low bq","NA"]
["UPN_Te4_015",1,36931980,"A","C","CSF3R","ENST00000373103","missense_variant","aTg/aGg|p.Met857Arg/c.2570T>G",10398,145,10567,0.0137219646067947,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.51,14.69,10398,145,10567,0.0137219646067947,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016",1,36931980,"A","C","CSF3R","ENST00000373103","missense_variant","aTg/aGg|p.Met857Arg/c.2570T>G",10049,128,10215,0.0125305922662751,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.61,15.54,10049,128,10215,0.0125305922662751,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",1,36931980,"A","C","CSF3R","ENST00000373103","missense_variant","aTg/aGg|p.Met857Arg/c.2570T>G",13296,151,13507,0.0111793884652402,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.37,14.37,13296,151,13507,0.0111793884652402,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",1,36931981,"T","A","CSF3R","ENST00000373103","missense_variant","Atg/Ttg|p.Met857Leu/c.2569A>T",13087,273,13435,0.020320059545962,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.76,15.17,13087,273,13435,0.020320059545962,0,0,0,"NA","low bq","NA"]
["UPN_Te4_002",1,36931981,"T","A","CSF3R","ENST00000373103","missense_variant","Atg/Ttg|p.Met857Leu/c.2569A>T",10965,235,11241,0.0209056133795926,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.57,15,10964,235,11240,0.0209074733096085,1,0,1,0,"low bq","NA"]
["UPN_Te4_003",1,36931981,"T","A","CSF3R","ENST00000373103","missense_variant","Atg/Ttg|p.Met857Leu/c.2569A>T",7877,205,8124,0.025233874938454,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.32,15,7876,205,8123,0.0252369814108088,1,0,1,0,"low bq","NA"]
["UPN_Te4_004",1,36931981,"T","A","CSF3R","ENST00000373103","missense_variant","Atg/Ttg|p.Met857Leu/c.2569A>T",12266,263,12576,0.0209128498727735,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.35,14.97,12266,263,12576,0.0209128498727735,0,0,0,"NA","low bq","NA"]
["UPN_Te4_005",1,36931981,"T","A","CSF3R","ENST00000373103","missense_variant","Atg/Ttg|p.Met857Leu/c.2569A>T",11580,256,11887,0.0215361319088079,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.43,14.77,11580,256,11887,0.0215361319088079,0,0,0,"NA","low bq","NA"]
["UPN_Te4_006",1,36931981,"T","A","CSF3R","ENST00000373103","missense_variant","Atg/Ttg|p.Met857Leu/c.2569A>T",11430,206,11693,0.0176173779184127,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.26,14.97,11430,206,11693,0.0176173779184127,0,0,0,"NA","low bq","NA"]
["UPN_Te4_007",1,36931981,"T","A","CSF3R","ENST00000373103","missense_variant","Atg/Ttg|p.Met857Leu/c.2569A>T",13223,275,13566,0.0202712664012974,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.48,15.59,13223,275,13566,0.0202712664012974,0,0,0,"NA","low bq","NA"]
["UPN_Te4_008",1,36931981,"T","A","CSF3R","ENST00000373103","missense_variant","Atg/Ttg|p.Met857Leu/c.2569A>T",16727,343,17157,0.0199918400652795,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.48,15.56,16727,343,17157,0.0199918400652795,0,0,0,"NA","low bq","NA"]
["UPN_Te4_009",1,36931981,"T","A","CSF3R","ENST00000373103","missense_variant","Atg/Ttg|p.Met857Leu/c.2569A>T",5806,101,5942,0.0169976438909458,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.27,14.74,5806,101,5942,0.0169976438909458,0,0,0,"NA","low bq","NA"]
["UPN_Te4_010",1,36931981,"T","A","CSF3R","ENST00000373103","missense_variant","Atg/Ttg|p.Met857Leu/c.2569A>T",12070,248,12386,0.0200226061682545,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.24,15.09,12070,248,12386,0.0200226061682545,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",1,36931981,"T","A","CSF3R","ENST00000373103","missense_variant","Atg/Ttg|p.Met857Leu/c.2569A>T",13043,294,13421,0.0219059682586991,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.65,15.32,13043,294,13421,0.0219059682586991,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",1,36931981,"T","A","CSF3R","ENST00000373103","missense_variant","Atg/Ttg|p.Met857Leu/c.2569A>T",3503,81,3601,0.022493751735629,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.78,14.72,3503,81,3601,0.022493751735629,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",1,36931981,"T","A","CSF3R","ENST00000373103","missense_variant","Atg/Ttg|p.Met857Leu/c.2569A>T",14300,336,14736,0.0228013029315961,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.66,15.53,14299,336,14735,0.0228028503562945,1,0,1,0,"low bq","NA"]
["UPN_Te4_015",1,36931981,"T","A","CSF3R","ENST00000373103","missense_variant","Atg/Ttg|p.Met857Leu/c.2569A>T",10264,223,10555,0.0211274277593558,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.76,16.05,10264,223,10555,0.0211274277593558,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016",1,36931981,"T","A","CSF3R","ENST00000373103","missense_variant","Atg/Ttg|p.Met857Leu/c.2569A>T",9901,247,10209,0.0241943383289255,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.83,15.13,9901,247,10209,0.0241943383289255,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",1,36931981,"T","A","CSF3R","ENST00000373103","missense_variant","Atg/Ttg|p.Met857Leu/c.2569A>T",13144,293,13505,0.0216956682710107,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.68,15.14,13144,293,13505,0.0216956682710107,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",1,36931986,"T","A","CSF3R","ENST00000373103","missense_variant","cAt/cTt|p.His855Leu/c.2564A>T",13038,315,13434,0.023447967842787,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.92,16.42,13038,315,13434,0.023447967842787,0,0,0,"NA","low bq","NA"]
["UPN_Te4_002",1,36931986,"T","A","CSF3R","ENST00000373103","missense_variant","cAt/cTt|p.His855Leu/c.2564A>T",10972,220,11233,0.0195851508946853,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.17,15.52,10971,220,11232,0.0195868945868946,1,0,1,0,"low bq","NA"]
["UPN_Te4_003",1,36931986,"T","A","CSF3R","ENST00000373103","missense_variant","cAt/cTt|p.His855Leu/c.2564A>T",7884,198,8124,0.0243722304283604,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.87,15.8,7883,198,8123,0.0243752308260495,1,0,1,0,"low bq","NA"]
["UPN_Te4_004",1,36931986,"T","A","CSF3R","ENST00000373103","missense_variant","cAt/cTt|p.His855Leu/c.2564A>T",12262,272,12576,0.0216284987277354,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.9,15.23,12262,272,12576,0.0216284987277354,0,0,0,"NA","low bq","NA"]
["UPN_Te4_005",1,36931986,"T","A","CSF3R","ENST00000373103","missense_variant","cAt/cTt|p.His855Leu/c.2564A>T",11552,267,11881,0.0224728558202172,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.95,14.88,11552,267,11881,0.0224728558202172,0,0,0,"NA","low bq","NA"]
["UPN_Te4_006",1,36931986,"T","A","CSF3R","ENST00000373103","missense_variant","cAt/cTt|p.His855Leu/c.2564A>T",11366,280,11689,0.0239541449225768,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.96,15.12,11366,280,11689,0.0239541449225768,0,0,0,"NA","low bq","NA"]
["UPN_Te4_007",1,36931986,"T","A","CSF3R","ENST00000373103","missense_variant","cAt/cTt|p.His855Leu/c.2564A>T",13242,273,13562,0.020129774369562,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.95,15.53,13242,273,13562,0.020129774369562,0,0,0,"NA","low bq","NA"]
["UPN_Te4_008",1,36931986,"T","A","CSF3R","ENST00000373103","missense_variant","cAt/cTt|p.His855Leu/c.2564A>T",16702,384,17156,0.0223828398228025,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.01,16.68,16702,384,17156,0.0223828398228025,0,0,0,"NA","low bq","NA"]
["UPN_Te4_009",1,36931986,"T","A","CSF3R","ENST00000373103","missense_variant","cAt/cTt|p.His855Leu/c.2564A>T",5810,108,5941,0.0181787577848847,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.84,16.32,5810,108,5941,0.0181787577848847,0,0,0,"NA","low bq","NA"]
["UPN_Te4_010",1,36931986,"T","A","CSF3R","ENST00000373103","missense_variant","cAt/cTt|p.His855Leu/c.2564A>T",12074,267,12381,0.0215653016719166,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.8,15.06,12074,267,12381,0.0215653016719166,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",1,36931986,"T","A","CSF3R","ENST00000373103","missense_variant","cAt/cTt|p.His855Leu/c.2564A>T",12961,367,13411,0.0273655954067556,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.77,16.22,12961,367,13411,0.0273655954067556,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",1,36931986,"T","A","CSF3R","ENST00000373103","missense_variant","cAt/cTt|p.His855Leu/c.2564A>T",3460,120,3597,0.0333611342785655,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.65,16.1,3460,120,3597,0.0333611342785655,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",1,36931986,"T","A","CSF3R","ENST00000373103","missense_variant","cAt/cTt|p.His855Leu/c.2564A>T",14211,450,14728,0.0305540467137425,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.62,16.55,14210,450,14727,0.0305561214096557,1,0,1,0,"low bq","NA"]
["UPN_Te4_015",1,36931986,"T","A","CSF3R","ENST00000373103","missense_variant","cAt/cTt|p.His855Leu/c.2564A>T",10183,319,10552,0.0302312357846854,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.82,15.97,10183,319,10552,0.0302312357846854,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016",1,36931986,"T","A","CSF3R","ENST00000373103","missense_variant","cAt/cTt|p.His855Leu/c.2564A>T",9864,290,10203,0.028423012839361,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.63,15.77,9864,290,10203,0.028423012839361,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",1,36931986,"T","A","CSF3R","ENST00000373103","missense_variant","cAt/cTt|p.His855Leu/c.2564A>T",13028,410,13496,0.0303793716656787,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.75,15.55,13028,410,13496,0.0303793716656787,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",1,36931989,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val854Gly/c.2561T>G",13162,205,13467,0.0152223954852603,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",22.71,14.87,13141,192,13433,0.0142931586391722,21,13,34,0.382352941176471,"low bq","NA"]
["UPN_Te4_002",1,36931989,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val854Gly/c.2561T>G",11061,116,11232,0.0103276353276353,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.1,14.65,11059,116,11230,0.0103294746215494,2,0,2,0,"low bq","NA"]
["UPN_Te4_003",1,36931989,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val854Gly/c.2561T>G",8012,89,8136,0.0109390363815143,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.88,14.49,7999,88,8122,0.0108347697611426,13,1,14,0.0714285714285714,"low bq","NA"]
["UPN_Te4_005",1,36931989,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val854Gly/c.2561T>G",11720,120,11899,0.0100848810824439,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.71,14.12,11708,113,11880,0.00951178451178451,12,7,19,0.368421052631579,"low bq","NA"]
["UPN_Te4_010",1,36931989,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val854Gly/c.2561T>G",12204,132,12387,0.0106563332526035,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.22,14.27,12196,132,12379,0.0106632199693029,8,0,8,0,"low bq","NA"]
["UPN_Te4_011",1,36931989,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val854Gly/c.2561T>G",13167,156,13415,0.0116287737607156,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.03,14.34,13162,155,13409,0.0115594004027146,5,1,6,0.166666666666667,"low bq","NA"]
["UPN_Te4_012",1,36931989,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val854Gly/c.2561T>G",5859,66,5952,0.0110887096774194,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.95,14.85,5849,66,5942,0.0111073712554695,10,0,10,0,"low bq","NA"]
["UPN_Te4_013",1,36931989,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val854Gly/c.2561T>G",3533,41,3603,0.0113794060505135,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.24,14.32,3527,41,3597,0.0113983875451765,6,0,6,0,"low bq","NA"]
["UPN_Te4_014",1,36931989,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val854Gly/c.2561T>G",14446,200,14736,0.0135722041259501,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.65,14.4,14434,200,14724,0.0135832654170062,12,0,12,0,"low bq","NA"]
["UPN_Te4_015",1,36931989,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val854Gly/c.2561T>G",10348,136,10558,0.0128812275052093,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.67,14.64,10344,132,10549,0.0125130344108446,4,4,9,0.444444444444444,"low bq","NA"]
["UPN_Te4_016",1,36931989,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val854Gly/c.2561T>G",10013,141,10215,0.0138032305433186,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.43,14.74,10005,136,10202,0.0133307194667712,8,5,13,0.384615384615385,"low bq","NA"]
["UPN_Te4_017",1,36931989,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val854Gly/c.2561T>G",5464,60,5542,0.010826416456153,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.08,14.12,5463,60,5541,0.0108283703302653,1,0,1,0,"low bq","NA"]
["UPN_Te4_018",1,36931989,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val854Gly/c.2561T>G",13246,159,13516,0.0117638354542764,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.17,14.42,13231,153,13495,0.0113375324194146,15,6,21,0.285714285714286,"low bq","NA"]
["UPN_Te4_022",1,36931989,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val854Gly/c.2561T>G",8414,87,8524,0.0102064758329423,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.61,14.33,8401,87,8511,0.0102220655622136,13,0,13,0,"low bq","NA"]
["UPN_Te4_001",1,36931996,"T","A","CSF3R","ENST00000373103","missense_variant","Atc/Ttc|p.Ile852Phe/c.2554A>T",26350,305,27000,0.0112962962962963,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.31,17.42,13105,256,13417,0.0190802712976075,13245,49,13583,0.00360745048958257,"low bq","NA"]
["UPN_Te4_003",1,36931996,"T","A","CSF3R","ENST00000373103","missense_variant","Atc/Ttc|p.Ile852Phe/c.2554A>T",15941,169,16325,0.0103522205206738,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.07,16.07,7914,157,8116,0.0193445046821094,8027,12,8209,0.00146181020830795,"low bq","NA"]
["UPN_Te4_005",1,36931996,"T","A","CSF3R","ENST00000373103","missense_variant","Atc/Ttc|p.Ile852Phe/c.2554A>T",23244,260,23815,0.0109174889775352,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.88,15.53,11581,243,11870,0.0204717775905644,11663,17,11945,0.00142318961908748,"low bq","NA"]
["UPN_Te4_008",1,36931996,"T","A","CSF3R","ENST00000373103","missense_variant","Atc/Ttc|p.Ile852Phe/c.2554A>T",33622,346,34408,0.0100558009765171,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.97,15.73,16735,327,17139,0.0190792928408892,16887,19,17269,0.00110023741965371,"low bq","NA"]
["UPN_Te4_011",1,36931996,"T","A","CSF3R","ENST00000373103","missense_variant","Atc/Ttc|p.Ile852Phe/c.2554A>T",26317,295,26975,0.0109360518999073,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.16,15.87,13044,271,13393,0.0202344508325245,13273,24,13582,0.0017670446178766,"low bq","NA"]
["UPN_Te4_013",1,36931996,"T","A","CSF3R","ENST00000373103","missense_variant","Atc/Ttc|p.Ile852Phe/c.2554A>T",7070,88,7253,0.0121329105197849,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.12,16.27,3495,81,3592,0.0225501113585746,3575,7,3661,0.00191204588910134,"low bq","NA"]
["UPN_Te4_014",1,36931996,"T","A","CSF3R","ENST00000373103","missense_variant","Atc/Ttc|p.Ile852Phe/c.2554A>T",28895,325,29632,0.0109678725701944,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.18,15.76,14318,309,14703,0.0210161191593552,14577,16,14929,0.00107173956728515,"low bq","NA"]
["UPN_Te4_016",1,36931996,"T","A","CSF3R","ENST00000373103","missense_variant","Atc/Ttc|p.Ile852Phe/c.2554A>T",20087,230,20543,0.0111960278440345,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.31,15.49,9927,217,10190,0.0212953876349362,10160,13,10353,0.00125567468366657,"low bq","NA"]
["UPN_Te4_018",1,36931996,"T","A","CSF3R","ENST00000373103","missense_variant","Atc/Ttc|p.Ile852Phe/c.2554A>T",26427,285,27127,0.0105061377962915,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.03,15.69,13139,268,13481,0.0198798308730806,13288,17,13646,0.00124578631100689,"low bq","NA"]
["UPN_Te4_012",1,36931996,"T","G","CSF3R","ENST00000373103","missense_variant","Atc/Ctc|p.Ile852Leu/c.2554A>C",11702,140,11925,0.0117400419287212,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.25,14.34,5875,5,5938,0.000842034355001684,5827,135,5987,0.0225488558543511,"low bq","NA"]
["UPN_Te4_013",1,36931996,"T","G","CSF3R","ENST00000373103","missense_variant","Atc/Ctc|p.Ile852Leu/c.2554A>C",7070,74,7253,0.0102026747552737,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.12,14.78,3495,7,3592,0.00194877505567929,3575,67,3661,0.0183010106528271,"low bq","NA"]
["UPN_Te4_017",1,36931996,"T","G","CSF3R","ENST00000373103","missense_variant","Atc/Ctc|p.Ile852Leu/c.2554A>C",10941,117,11121,0.0105206366333963,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.38,14.23,5495,1,5541,0.000180472838837755,5446,116,5580,0.0207885304659498,"low bq","NA"]
["UPN_Te4_018",1,36931996,"T","G","CSF3R","ENST00000373103","missense_variant","Atc/Ctc|p.Ile852Leu/c.2554A>C",26427,284,27127,0.010469274154901,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.03,14.46,13139,18,13481,0.00133521252132631,13288,266,13646,0.0194928916898725,"low bq","NA"]
["UPN_Te4_019",1,36931996,"T","G","CSF3R","ENST00000373103","missense_variant","Atc/Ctc|p.Ile852Leu/c.2554A>C",9582,105,9749,0.0107703354190173,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.2,14.26,4801,5,4850,0.00103092783505155,4781,100,4899,0.0204123290467442,"low bq","NA"]
["UPN_Te4_020",1,36931996,"T","G","CSF3R","ENST00000373103","missense_variant","Atc/Ctc|p.Ile852Leu/c.2554A>C",18938,209,19249,0.0108577068938646,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.27,14.23,9498,7,9579,0.000730765215575739,9440,202,9670,0.0208893485005171,"low bq","NA"]
["UPN_Te4_021",1,36931996,"T","G","CSF3R","ENST00000373103","missense_variant","Atc/Ctc|p.Ile852Leu/c.2554A>C",23563,273,24026,0.0113626904187131,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.15,14.53,11808,11,11955,0.000920117105813467,11755,262,12071,0.0217049126004474,"low bq","NA"]
["UPN_Te4_022",1,36931996,"T","G","CSF3R","ENST00000373103","missense_variant","Atc/Ctc|p.Ile852Leu/c.2554A>C",16751,214,17077,0.0125314750834456,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.13,14.47,8419,8,8509,0.000940180984839582,8332,206,8568,0.0240429505135388,"low bq","NA"]
["UPN_Te4_001",1,36932001,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln850Leu/c.2549A>T",26268,451,27020,0.0166913397483346,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.2,15.52,12777,430,13405,0.0320775829914211,13491,21,13615,0.00154241645244216,"low bq","NA"]
["UPN_Te4_002",1,36932001,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln850Leu/c.2549A>T",22023,356,22546,0.015789940565954,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.92,15.85,10781,335,11223,0.0298494163770828,11242,21,11323,0.00185463216462068,"low bq","NA"]
["UPN_Te4_003",1,36932001,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln850Leu/c.2549A>T",15943,242,16335,0.0148148148148148,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.02,15.45,7778,232,8114,0.0285925560759182,8165,10,8221,0.00121639703199124,"low bq","NA"]
["UPN_Te4_004",1,36932001,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln850Leu/c.2549A>T",24654,367,25271,0.0145225752839223,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.74,15.25,12035,352,12561,0.0280232465568028,12619,15,12710,0.0011801730920535,"low bq","NA"]
["UPN_Te4_005",1,36932001,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln850Leu/c.2549A>T",23247,363,23840,0.0152265100671141,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.85,15.3,11365,349,11868,0.0294068082237951,11882,14,11972,0.00116939525559639,"low bq","NA"]
["UPN_Te4_006",1,36932001,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln850Leu/c.2549A>T",22932,357,23506,0.0151876116736152,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.65,15.21,11199,342,11682,0.0292758089368259,11733,15,11824,0.00126860622462788,"low bq","NA"]
["UPN_Te4_007",1,36932001,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln850Leu/c.2549A>T",26590,405,27229,0.0148738477358698,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.96,15.45,12998,385,13537,0.028440570288838,13592,20,13692,0.00146070698217937,"low bq","NA"]
["UPN_Te4_008",1,36932001,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln850Leu/c.2549A>T",33706,487,34441,0.0141401236897883,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.87,15.52,16504,459,17133,0.0267904044825775,17202,28,17308,0.00161774901779524,"low bq","NA"]
["UPN_Te4_009",1,36932001,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln850Leu/c.2549A>T",11668,171,11940,0.014321608040201,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.92,15.68,5704,165,5936,0.0277964959568733,5964,6,6004,0.000999333777481679,"low bq","NA"]
["UPN_Te4_010",1,36932001,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln850Leu/c.2549A>T",24280,399,24865,0.01604665192037,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.78,15.62,11867,377,12371,0.0304744968070487,12413,22,12494,0.00176084520569874,"low bq","NA"]
["UPN_Te4_011",1,36932001,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln850Leu/c.2549A>T",26262,437,26993,0.0161893824324825,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.24,16,12771,414,13382,0.0309370796592438,13491,23,13611,0.00168980971273235,"low bq","NA"]
["UPN_Te4_013",1,36932001,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln850Leu/c.2549A>T",7053,127,7255,0.0175051688490696,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.09,17.22,3414,121,3589,0.0337141264976317,3639,6,3666,0.0016366612111293,"low bq","NA"]
["UPN_Te4_014",1,36932001,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln850Leu/c.2549A>T",28792,553,29650,0.0186509274873524,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.22,16.96,13967,508,14689,0.0345837020899993,14825,45,14961,0.00300782033286545,"low bq","NA"]
["UPN_Te4_015",1,36932001,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln850Leu/c.2549A>T",20708,330,21222,0.0155499010460843,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.26,15.51,10083,320,10526,0.0304009120273608,10625,10,10696,0.00093492894540015,"low bq","NA"]
["UPN_Te4_016",1,36932001,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln850Leu/c.2549A>T",19974,371,20558,0.0180465025780718,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.24,15.72,9684,356,10185,0.0349533627884143,10290,15,10373,0.00144606189144895,"low bq","NA"]
["UPN_Te4_018",1,36932001,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln850Leu/c.2549A>T",26376,519,27147,0.0191181346005083,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.21,16.32,12804,486,13471,0.0360774998144162,13572,33,13676,0.00241298625329044,"low bq","NA"]
["UPN_Te4_002",1,36932004,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu849Arg/c.2546T>G",22157,232,22546,0.010290073627251,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.99,14.8,11150,18,11222,0.00160399215826056,11007,214,11324,0.0188979159307665,"low bq","NA"]
["UPN_Te4_004",1,36932004,"A","C","CSF3R","ENST00000373103","missense_variant","cTg/cGg|p.Leu849Arg/c.2546T>G",24849,273,25282,0.0107981963452259,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.79,14.49,12492,13,12559,0.00103511426068955,12357,260,12723,0.0204354318949933,"low bq","NA"]
["UPN_Te4_013",1,36932016,"T","A","CSF3R","ENST00000373103","missense_variant","aAc/aTc|p.Asn845Ile/c.2534A>T",7075,78,7242,0.0107705053852527,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.13,18.36,3471,70,3574,0.0195858981533296,3604,8,3668,0.00218102508178844,"low bq","NA"]
["UPN_Te4_018",1,36932016,"T","A","CSF3R","ENST00000373103","missense_variant","aAc/aTc|p.Asn845Ile/c.2534A>T",26527,287,27125,0.0105806451612903,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.17,17.75,13078,252,13436,0.0187555820184579,13449,35,13689,0.0025567974285923,"low bq","NA"]
["UPN_Te4_001",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",24079,2538,26781,0.0947686792875546,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.92,15.81,10612,2408,13109,0.183690594248226,13467,130,13672,0.00950848449385606,"low bq","NA"]
["UPN_Te4_002",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",21030,1255,22404,0.0560167827173719,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.45,15.44,9835,1136,11038,0.102917195144048,11195,119,11366,0.0104698222769664,"low bq","NA"]
["UPN_Te4_003",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",15121,964,16188,0.059550284161107,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.66,15.73,7022,882,7957,0.11084579615433,8099,82,8231,0.00996233750455595,"low bq","NA"]
["UPN_Te4_004",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",23457,1511,25092,0.0602183963016101,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.28,15.41,10899,1393,12357,0.112729626932103,12558,118,12735,0.00926580290537888,"low bq","NA"]
["UPN_Te4_005",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",22156,1397,23658,0.0590497928819004,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.46,15.21,10324,1272,11656,0.109128345916266,11832,125,12002,0.0104149308448592,"low bq","NA"]
["UPN_Te4_006",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",21810,1426,23366,0.0610288453308226,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.19,15.25,10129,1306,11505,0.113515862668405,11681,120,11861,0.0101171907933564,"low bq","NA"]
["UPN_Te4_007",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",25375,1557,27093,0.0574687188572694,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.54,15.23,11851,1405,13344,0.105290767386091,13524,152,13749,0.0110553494799622,"low bq","NA"]
["UPN_Te4_008",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",32060,1962,34196,0.0573751315943385,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.36,15.41,14962,1779,16838,0.105653878132795,17098,183,17358,0.0105426892499136,"low bq","NA"]
["UPN_Te4_009",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",11052,717,11821,0.0606547669401912,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.46,14.94,5119,656,5804,0.11302549965541,5933,61,6017,0.0101379424962606,"low bq","NA"]
["UPN_Te4_010",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",23124,1451,24712,0.0587164130786662,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.5,15.37,10781,1340,12200,0.10983606557377,12343,111,12512,0.00887148337595908,"low bq","NA"]
["UPN_Te4_011",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",23917,2633,26733,0.0984924999064826,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.87,15.66,10459,2511,13067,0.192163465217724,13458,122,13666,0.00892726474462169,"low bq","NA"]
["UPN_Te4_012",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",9910,1851,11796,0.156917599186165,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.09,18.45,3966,1809,5791,0.312381281298567,5944,42,6005,0.00699417152373022,"low bq","NA"]
["UPN_Te4_013",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",6405,702,7171,0.0978942964719007,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.88,15.98,2795,669,3497,0.191306834429511,3610,33,3674,0.00898203592814371,"low bq","NA"]
["UPN_Te4_014",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",26424,2774,29345,0.0945305844266485,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.97,15.84,11614,2653,14341,0.184994072937731,14810,121,15004,0.00806451612903226,"low bq","NA"]
["UPN_Te4_015",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",18910,1904,20938,0.0909351418473589,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25,15.76,8342,1805,10215,0.176700930004895,10568,99,10723,0.00923249090739532,"low bq","NA"]
["UPN_Te4_016",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",18351,1876,20369,0.0921007413225981,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.87,15.8,8111,1789,9974,0.179366352516543,10240,87,10395,0.00836940836940837,"low bq","NA"]
["UPN_Te4_017",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",9344,1627,11005,0.147841890049977,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.23,18.22,3789,1600,5405,0.296022201665125,5555,27,5600,0.00482142857142857,"low bq","NA"]
["UPN_Te4_018",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",24239,2423,26826,0.0903228211436666,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.78,15.72,10742,2298,13126,0.175072375438062,13497,125,13700,0.00912408759124088,"low bq","NA"]
["UPN_Te4_019",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",8069,1548,9646,0.160481028405557,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.24,18.42,3203,1522,4740,0.321097046413502,4866,26,4906,0.00529963310232368,"low bq","NA"]
["UPN_Te4_020",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",16161,2863,19074,0.150099612037328,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.07,18.31,6545,2812,9380,0.299786780383795,9616,51,9694,0.00526098617701671,"low bq","NA"]
["UPN_Te4_021",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",20149,3517,23756,0.148046809227143,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.04,18.49,8144,3471,11656,0.297786547700755,12005,46,12100,0.00380165289256198,"low bq","NA"]
["UPN_Te4_022",1,36932034,"A","C","CSF3R","ENST00000373103","missense_variant","gTc/gGc|p.Val839Gly/c.2516T>G",14160,2654,16871,0.157311362693379,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.02,18.3,5646,2598,8275,0.313957703927492,8514,56,8596,0.00651465798045603,"low bq","NA"]
["UPN_Te4_001",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",13264,342,13672,0.0250146284376829,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.6,14.42,0,0,0,"NA",13264,342,13672,0.0250146284376829,"low bq","NA"]
["UPN_Te4_002",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",11036,274,11369,0.0241006245052335,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.42,14.66,0,0,0,"NA",11036,274,11369,0.0241006245052335,"low bq","NA"]
["UPN_Te4_004",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",12399,287,12737,0.0225327785192746,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.16,14.25,0,0,0,"NA",12399,287,12737,0.0225327785192746,"low bq","NA"]
["UPN_Te4_005",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",11692,264,12006,0.0219890054972514,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.39,14.46,0,0,0,"NA",11692,264,12006,0.0219890054972514,"low bq","NA"]
["UPN_Te4_006",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",11514,282,11862,0.0237733940313606,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.14,14.49,0,0,0,"NA",11514,282,11862,0.0237733940313606,"low bq","NA"]
["UPN_Te4_007",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",13412,284,13750,0.0206545454545455,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.55,14.49,0,0,0,"NA",13412,284,13750,0.0206545454545455,"low bq","NA"]
["UPN_Te4_008",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",16929,354,17363,0.0203881817658239,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.35,14.6,0,0,0,"NA",16929,354,17363,0.0203881817658239,"low bq","NA"]
["UPN_Te4_009",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",5881,115,6018,0.0191093386507145,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.54,14.48,0,0,0,"NA",5881,115,6018,0.0191093386507145,"low bq","NA"]
["UPN_Te4_010",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",12241,215,12514,0.0171807575515423,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.78,14.54,2,0,2,0,12239,215,12512,0.0171835038363171,"low bq","NA"]
["UPN_Te4_011",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",13260,328,13667,0.0239994146484232,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.66,14.66,0,0,0,"NA",13260,328,13667,0.0239994146484232,"low bq","NA"]
["UPN_Te4_012",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",5813,161,6006,0.0268065268065268,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.39,15.34,0,0,0,"NA",5813,161,6006,0.0268065268065268,"low bq","NA"]
["UPN_Te4_013",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",3561,100,3676,0.0272034820457018,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.59,14.7,0,0,0,"NA",3561,100,3676,0.0272034820457018,"low bq","NA"]
["UPN_Te4_014",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",14581,355,15005,0.0236587804065312,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.52,14.69,0,0,0,"NA",14581,355,15005,0.0236587804065312,"low bq","NA"]
["UPN_Te4_015",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",10435,237,10723,0.0221020236874009,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.87,14.74,0,0,0,"NA",10435,237,10723,0.0221020236874009,"low bq","NA"]
["UPN_Te4_016",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",10110,235,10398,0.0226005000961723,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.93,14.58,0,0,0,"NA",10110,235,10398,0.0226005000961723,"low bq","NA"]
["UPN_Te4_017",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",5462,124,5604,0.0221270521056388,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.63,14.6,4,0,4,0,5458,124,5600,0.0221428571428571,"low bq","NA"]
["UPN_Te4_018",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",13298,322,13702,0.0235002189461393,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.52,14.51,0,0,0,"NA",13298,322,13702,0.0235002189461393,"low bq","NA"]
["UPN_Te4_019",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",4780,111,4907,0.0226207458732423,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.33,14.74,1,0,1,0,4779,111,4906,0.0226253567060742,"low bq","NA"]
["UPN_Te4_020",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",9445,231,9696,0.0238242574257426,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.26,14.68,0,0,0,"NA",9445,231,9696,0.0238242574257426,"low bq","NA"]
["UPN_Te4_021",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",11760,305,12102,0.0252024458767146,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.38,14.77,0,0,0,"NA",11760,305,12102,0.0252024458767146,"low bq","NA"]
["UPN_Te4_022",1,36932040,"T","G","CSF3R","ENST00000373103","missense_variant","gAc/gCc|p.Asp837Ala/c.2510A>C",8356,212,8596,0.024662633783155,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.26,14.75,0,0,0,"NA",8356,212,8596,0.024662633783155,"low bq","NA"]
["UPN_Te4_002",1,36932053,"T","G","CSF3R","ENST00000373103","missense_variant","Agc/Cgc|p.Ser833Arg/c.2497A>C",11204,131,11381,0.011510412090326,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.96,14.37,0,0,0,"NA",11204,131,11381,0.011510412090326,"low bq","NA"]
["UPN_Te4_003",1,36932053,"T","G","CSF3R","ENST00000373103","missense_variant","Agc/Cgc|p.Ser833Arg/c.2497A>C",8113,88,8237,0.0106835012747359,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.48,14.56,0,0,0,"NA",8113,88,8237,0.0106835012747359,"low bq","NA"]
["UPN_Te4_004",1,36932053,"T","G","CSF3R","ENST00000373103","missense_variant","Agc/Cgc|p.Ser833Arg/c.2497A>C",12552,138,12748,0.0108252274866646,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.55,14.37,0,0,0,"NA",12552,138,12748,0.0108252274866646,"low bq","NA"]
["UPN_Te4_005",1,36932053,"T","G","CSF3R","ENST00000373103","missense_variant","Agc/Cgc|p.Ser833Arg/c.2497A>C",11802,147,12011,0.0122387811173091,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.05,14.26,0,0,0,"NA",11802,147,12011,0.0122387811173091,"low bq","NA"]
["UPN_Te4_006",1,36932053,"T","G","CSF3R","ENST00000373103","missense_variant","Agc/Cgc|p.Ser833Arg/c.2497A>C",11678,124,11869,0.0104473839413598,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.79,14.39,0,0,0,"NA",11678,124,11869,0.0104473839413598,"low bq","NA"]
["UPN_Te4_007",1,36932053,"T","G","CSF3R","ENST00000373103","missense_variant","Agc/Cgc|p.Ser833Arg/c.2497A>C",13546,161,13761,0.0116997311241916,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.13,14.4,0,0,0,"NA",13546,161,13761,0.0116997311241916,"low bq","NA"]
["UPN_Te4_008",1,36932053,"T","G","CSF3R","ENST00000373103","missense_variant","Agc/Cgc|p.Ser833Arg/c.2497A>C",17110,183,17388,0.0105244996549344,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.08,14.39,0,0,0,"NA",17110,183,17388,0.0105244996549344,"low bq","NA"]
["UPN_Te4_010",1,36932053,"T","G","CSF3R","ENST00000373103","missense_variant","Agc/Cgc|p.Ser833Arg/c.2497A>C",12344,135,12523,0.0107801644973249,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.51,15.87,0,0,0,"NA",12344,135,12523,0.0107801644973249,"low bq","NA"]
["UPN_Te4_018",1,36932053,"T","G","CSF3R","ENST00000373103","missense_variant","Agc/Cgc|p.Ser833Arg/c.2497A>C",13492,154,13710,0.0112326768781911,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.58,15.08,0,0,0,"NA",13492,154,13710,0.0112326768781911,"low bq","NA"]
["UPN_Te4_001",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",13332,302,13702,0.0220405780178076,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.07,14.59,0,0,0,"NA",13332,302,13702,0.0220405780178076,"low bq","NA"]
["UPN_Te4_002",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",11146,184,11391,0.0161531033271881,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.16,14.43,0,0,0,"NA",11146,184,11391,0.0161531033271881,"low bq","NA"]
["UPN_Te4_003",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",8092,106,8242,0.0128609560786217,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.47,14.51,0,0,0,"NA",8092,106,8242,0.0128609560786217,"low bq","NA"]
["UPN_Te4_004",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",12481,197,12753,0.0154473457225751,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",18.83,14.27,0,0,0,"NA",12481,197,12753,0.0154473457225751,"low bq","NA"]
["UPN_Te4_005",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",11775,184,12022,0.0153052736649476,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.03,14.33,0,0,0,"NA",11775,184,12022,0.0153052736649476,"low bq","NA"]
["UPN_Te4_006",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",11609,196,11874,0.0165066531918477,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",18.7,14.4,0,0,0,"NA",11609,196,11874,0.0165066531918477,"low bq","NA"]
["UPN_Te4_007",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",13474,218,13772,0.0158292187046181,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.15,14.66,0,0,0,"NA",13474,218,13772,0.0158292187046181,"low bq","NA"]
["UPN_Te4_008",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",17036,270,17401,0.0155163496350784,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.03,14.38,0,0,0,"NA",17036,270,17401,0.0155163496350784,"low bq","NA"]
["UPN_Te4_009",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",5907,77,6022,0.0127864496844902,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.03,14.29,0,0,0,"NA",5907,77,6022,0.0127864496844902,"low bq","NA"]
["UPN_Te4_010",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",12259,189,12529,0.015085002793519,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.19,14.25,0,0,0,"NA",12259,189,12529,0.015085002793519,"low bq","NA"]
["UPN_Te4_011",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",13286,308,13694,0.0224916021615306,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.04,14.32,0,0,0,"NA",13286,308,13694,0.0224916021615306,"low bq","NA"]
["UPN_Te4_012",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",5882,110,6015,0.0182876142975894,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.63,14.64,0,0,0,"NA",5882,110,6015,0.0182876142975894,"low bq","NA"]
["UPN_Te4_013",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",3572,84,3683,0.0228074938908499,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.98,14.71,0,0,0,"NA",3572,84,3683,0.0228074938908499,"low bq","NA"]
["UPN_Te4_014",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",14613,326,15021,0.0217029492044471,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.15,14.8,0,0,0,"NA",14613,326,15021,0.0217029492044471,"low bq","NA"]
["UPN_Te4_015",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",10464,204,10736,0.0190014903129657,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.05,14.36,0,0,0,"NA",10464,204,10736,0.0190014903129657,"low bq","NA"]
["UPN_Te4_016",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",10157,185,10410,0.0177713736791547,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.06,14.66,0,0,0,"NA",10157,185,10410,0.0177713736791547,"low bq","NA"]
["UPN_Te4_017",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",5485,97,5608,0.0172967189728959,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.07,14.95,3,0,3,0,5482,97,5605,0.0173059768064228,"low bq","NA"]
["UPN_Te4_018",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",13334,292,13721,0.0212812477224692,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.81,14.42,0,0,0,"NA",13334,292,13721,0.0212812477224692,"low bq","NA"]
["UPN_Te4_019",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",4801,78,4912,0.0158794788273616,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.42,14.09,1,0,1,0,4800,78,4911,0.0158827122785583,"low bq","NA"]
["UPN_Te4_020",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",9518,161,9709,0.0165825522710887,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.71,14.34,0,0,0,"NA",9518,161,9709,0.0165825522710887,"low bq","NA"]
["UPN_Te4_021",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",11896,203,12121,0.016747793086379,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.56,14.62,0,0,0,"NA",11896,203,12121,0.016747793086379,"low bq","NA"]
["UPN_Te4_022",1,36932074,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr826Pro/c.2476A>C",8439,148,8608,0.0171933085501859,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.5,14.86,0,0,0,"NA",8439,148,8608,0.0171933085501859,"low bq","NA"]
["UPN_Te4_010",1,36932213,"A","T","CSF3R","ENST00000373103","stop_gained","taT/taA|p.Tyr779*/c.2337T>A",1886,35,1929,0.0181441161223432,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.15,21.97,961,12,977,0.0122824974411464,925,23,952,0.0241596638655462,"low bq","NA"]
["UPN_Te4_002",1,36932225,"A","T","CSF3R","ENST00000373103","missense_variant","gaT/gaA|p.Asp775Glu/c.2325T>A",1772,24,1812,0.0132450331125828,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.6,23.58,902,7,918,0.00762527233115468,870,17,894,0.0190156599552573,"low bq","NA"]
["UPN_Te4_011",1,36932225,"A","T","CSF3R","ENST00000373103","missense_variant","gaT/gaA|p.Asp775Glu/c.2325T>A",2638,36,2691,0.0133779264214047,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.99,20,1341,7,1360,0.00514705882352941,1297,29,1331,0.0217881292261458,"low bq","NA"]
["UPN_Te4_016",1,36932225,"A","T","CSF3R","ENST00000373103","missense_variant","gaT/gaA|p.Asp775Glu/c.2325T>A",1937,21,1984,0.0105846774193548,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.94,16,998,1,1012,0.000988142292490119,939,20,972,0.0205761316872428,"low bq","NA"]
["UPN_Te4_008",1,36932239,"A","C","CSF3R","ENST00000373103","missense_variant","Tct/Gct|p.Ser771Ala/c.2311T>G",3424,35,3488,0.0100344036697248,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.69,14.2,1707,32,1745,0.0183381088825215,1717,3,1743,0.00172117039586919,"low bq","NA"]
["UPN_Te4_012",1,36932239,"A","C","CSF3R","ENST00000373103","missense_variant","Tct/Gct|p.Ser771Ala/c.2311T>G",969,21,995,0.021105527638191,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.2,14.33,473,21,496,0.0423387096774194,496,0,499,0,"low bq","NA"]
["UPN_Te4_014",1,36932239,"A","C","CSF3R","ENST00000373103","missense_variant","Tct/Gct|p.Ser771Ala/c.2311T>G",2706,28,2775,0.0100900900900901,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.75,14,1365,26,1395,0.0186379928315412,1341,2,1380,0.00144927536231884,"low bq","NA"]
["UPN_Te4_016",1,36932239,"A","C","CSF3R","ENST00000373103","missense_variant","Tct/Gct|p.Ser771Ala/c.2311T>G",1951,20,1994,0.0100300902708124,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.36,14,988,19,1010,0.0188118811881188,963,1,984,0.00101626016260163,"low bq","NA"]
["UPN_Te4_017",1,36932239,"A","C","CSF3R","ENST00000373103","missense_variant","Tct/Gct|p.Ser771Ala/c.2311T>G",824,20,847,0.0236127508854782,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.68,14.9,403,19,423,0.0449172576832151,421,1,424,0.00235849056603774,"low bq","NA"]
["UPN_Te4_018",1,36932239,"A","C","CSF3R","ENST00000373103","missense_variant","Tct/Gct|p.Ser771Ala/c.2311T>G",2054,28,2117,0.0132262635805385,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.01,14,1039,27,1071,0.0252100840336134,1015,1,1046,0.000956022944550669,"low bq","NA"]
["UPN_Te4_021",1,36932239,"A","C","CSF3R","ENST00000373103","missense_variant","Tct/Gct|p.Ser771Ala/c.2311T>G",1660,34,1704,0.0199530516431925,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.26,14.38,817,34,853,0.0398593200468933,843,0,851,0,"low bq","NA"]
["UPN_Te4_022",1,36932239,"A","C","CSF3R","ENST00000373103","missense_variant","Tct/Gct|p.Ser771Ala/c.2311T>G",1238,24,1267,0.0189423835832676,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.82,14.83,609,23,633,0.0363349131121643,629,1,634,0.00157728706624606,"low bq","NA"]
["UPN_Te4_001",1,36932239,"A","T","CSF3R","ENST00000373103","missense_variant","Tct/Act|p.Ser771Thr/c.2311T>A",1744,21,1790,0.011731843575419,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.98,17.71,884,2,906,0.0022075055187638,860,19,884,0.0214932126696833,"low bq","NA"]
["UPN_Te4_003",1,36932239,"A","T","CSF3R","ENST00000373103","missense_variant","Tct/Act|p.Ser771Thr/c.2311T>A",1557,25,1591,0.0157133878064111,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.83,18.76,790,4,801,0.00499375780274657,767,21,790,0.0265822784810127,"low bq","NA"]
["UPN_Te4_007",1,36932239,"A","T","CSF3R","ENST00000373103","missense_variant","Tct/Act|p.Ser771Thr/c.2311T>A",2022,22,2066,0.010648596321394,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.96,20,1017,3,1039,0.00288739172281039,1005,19,1027,0.0185004868549172,"low bq","NA"]
["UPN_Te4_014",1,36932239,"A","T","CSF3R","ENST00000373103","missense_variant","Tct/Act|p.Ser771Thr/c.2311T>A",2706,35,2775,0.0126126126126126,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.75,14.57,1365,1,1395,0.000716845878136201,1341,34,1380,0.0246376811594203,"low bq","NA"]
["UPN_Te4_018",1,36932239,"A","T","CSF3R","ENST00000373103","missense_variant","Tct/Act|p.Ser771Thr/c.2311T>A",2054,25,2117,0.0118091639111951,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.01,14.28,1039,0,1071,0,1015,25,1046,0.0239005736137667,"low bq","NA"]
["UPN_Te4_001",1,36932241,"T","G","CSF3R","ENST00000373103","missense_variant","cAg/cCg|p.Gln770Pro/c.2309A>C",929,20,952,0.0210084033613445,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.64,16.95,50,16,68,0.235294117647059,879,4,884,0.00452488687782805,"low bq","NA"]
["UPN_Te4_008",1,36932241,"T","G","CSF3R","ENST00000373103","missense_variant","cAg/cCg|p.Gln770Pro/c.2309A>C",1863,20,1887,0.0105988341282459,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.54,15.9,128,16,144,0.111111111111111,1735,4,1743,0.00229489386115892,"low bq","NA"]
["UPN_Te4_001",1,36932245,"A","T","CSF3R","ENST00000373103","missense_variant","Tcc/Acc|p.Ser769Thr/c.2305T>A",857,24,886,0.0270880361173815,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.63,15.29,0,0,0,"NA",857,24,886,0.0270880361173815,"low bq","NA"]
["UPN_Te4_002",1,36932245,"A","T","CSF3R","ENST00000373103","missense_variant","Tcc/Acc|p.Ser769Thr/c.2305T>A",880,28,915,0.0306010928961749,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.1,14.93,14,0,14,0,866,28,901,0.0310765815760266,"low bq","NA"]
["UPN_Te4_003",1,36932245,"A","T","CSF3R","ENST00000373103","missense_variant","Tcc/Acc|p.Ser769Thr/c.2305T>A",780,27,807,0.033457249070632,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.47,15.48,14,0,14,0,766,27,793,0.0340479192938209,"low bq","NA"]
["UPN_Te4_005",1,36932245,"A","T","CSF3R","ENST00000373103","missense_variant","Tcc/Acc|p.Ser769Thr/c.2305T>A",1029,24,1060,0.0226415094339623,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.76,15.58,17,0,17,0,1012,24,1043,0.0230105465004794,"low bq","NA"]
["UPN_Te4_006",1,36932245,"A","T","CSF3R","ENST00000373103","missense_variant","Tcc/Acc|p.Ser769Thr/c.2305T>A",1035,29,1068,0.0271535580524345,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.2,15.66,0,0,0,"NA",1035,29,1068,0.0271535580524345,"low bq","NA"]
["UPN_Te4_008",1,36932245,"A","T","CSF3R","ENST00000373103","missense_variant","Tcc/Acc|p.Ser769Thr/c.2305T>A",1695,37,1744,0.0212155963302752,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.02,15.49,0,0,0,"NA",1695,37,1744,0.0212155963302752,"low bq","NA"]
["UPN_Te4_011",1,36932245,"A","T","CSF3R","ENST00000373103","missense_variant","Tcc/Acc|p.Ser769Thr/c.2305T>A",1317,40,1361,0.0293901542983101,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.75,14.98,19,0,19,0,1298,40,1342,0.029806259314456,"low bq","NA"]
["UPN_Te4_014",1,36932245,"A","T","CSF3R","ENST00000373103","missense_variant","Tcc/Acc|p.Ser769Thr/c.2305T>A",1347,33,1392,0.0237068965517241,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.65,14,11,0,11,0,1336,33,1381,0.0238957277335264,"low bq","NA"]
["UPN_Te4_016",1,36932245,"A","T","CSF3R","ENST00000373103","missense_variant","Tcc/Acc|p.Ser769Thr/c.2305T>A",950,48,1000,0.048,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.77,17.23,10,0,10,0,940,48,990,0.0484848484848485,"low bq","NA"]
["UPN_Te4_018",1,36932245,"A","T","CSF3R","ENST00000373103","missense_variant","Tcc/Acc|p.Ser769Thr/c.2305T>A",1011,31,1051,0.0294957183634634,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.87,15.55,0,0,0,"NA",1011,31,1051,0.0294957183634634,"low bq","NA"]
["UPN_Te4_011",1,36932257,"T","G","CSF3R","ENST00000373103","missense_variant","Acc/Ccc|p.Thr765Pro/c.2293A>C",1337,20,1363,0.0146735143066764,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.91,16.75,18,0,19,0,1319,20,1344,0.0148809523809524,"low bq","NA"]
["UPN_Te4_001",1,36932262,"A","T","CSF3R","ENST00000373103","missense_variant","gTt/gAt|p.Val763Asp/c.2288T>A",857,23,886,0.0259593679458239,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.07,16.22,0,0,0,"NA",857,23,886,0.0259593679458239,"low bq","NA"]
["UPN_Te4_008",1,36932262,"A","T","CSF3R","ENST00000373103","missense_variant","gTt/gAt|p.Val763Asp/c.2288T>A",1701,20,1728,0.0115740740740741,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.55,14,0,0,0,"NA",1701,20,1728,0.0115740740740741,"low bq","NA"]
["UPN_Te4_011",1,36932262,"A","T","CSF3R","ENST00000373103","missense_variant","gTt/gAt|p.Val763Asp/c.2288T>A",1335,23,1363,0.0168745414526779,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.84,14,19,0,19,0,1316,23,1344,0.0171130952380952,"low bq","NA"]
["UPN_Te4_014",1,36932262,"A","T","CSF3R","ENST00000373103","missense_variant","gTt/gAt|p.Val763Asp/c.2288T>A",1367,23,1396,0.0164756446991404,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.04,14.3,11,0,11,0,1356,23,1385,0.0166064981949458,"low bq","NA"]
["UPN_Te4_016",1,36932262,"A","T","CSF3R","ENST00000373103","missense_variant","gTt/gAt|p.Val763Asp/c.2288T>A",973,26,1005,0.0258706467661692,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.86,14.5,10,0,10,0,963,26,995,0.0261306532663317,"low bq","NA"]
["UPN_Te4_018",1,36932262,"A","T","CSF3R","ENST00000373103","missense_variant","gTt/gAt|p.Val763Asp/c.2288T>A",1023,28,1059,0.0264400377714825,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.85,16.07,0,0,0,"NA",1023,28,1059,0.0264400377714825,"low bq","NA"]
["UPN_Te4_008",1,36932290,"A","T","CSF3R","ENST00000373103","missense_variant","Tat/Aat|p.Tyr754Asn/c.2260T>A",1701,24,1730,0.0138728323699422,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.66,23.17,0,0,0,"NA",1701,24,1730,0.0138728323699422,"low bq","NA"]
["UPN_Te4_004",1,36932299,"C","T","CSF3R","ENST00000373103","missense_variant","Gtc/Atc|p.Val751Ile/c.2251G>A",774,22,797,0.027603513174404,0,0,0,1,1,0,0,1,3,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.24,26.27,0,0,0,"NA",774,22,797,0.027603513174404,"low bq","NA"]
["UPN_Te4_011",1,36932301,"A","T","CSF3R","ENST00000373103","missense_variant","cTg/cAg|p.Leu750Gln/c.2249T>A",1324,20,1346,0.0148588410104012,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.92,20.35,0,0,0,"NA",1324,20,1346,0.0148588410104012,"low bq","NA"]
["UPN_Te4_014",1,36932301,"A","T","CSF3R","ENST00000373103","missense_variant","cTg/cAg|p.Leu750Gln/c.2249T>A",1345,21,1389,0.0151187904967603,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.97,19.48,0,0,0,"NA",1345,21,1389,0.0151187904967603,"low bq","NA"]
["UPN_Te4_018",1,36932301,"A","T","CSF3R","ENST00000373103","missense_variant","cTg/cAg|p.Leu750Gln/c.2249T>A",1027,24,1060,0.0226415094339623,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.03,23.12,0,0,0,"NA",1027,24,1060,0.0226415094339623,"low bq","NA"]
["UPN_Te4_001",1,36932359,"T","A","CSF3R","ENST00000373103","stop_gained","Aag/Tag|p.Lys731*/c.2191A>T",7837,80,7965,0.0100439422473321,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.51,20.15,6949,80,7075,0.0113074204946996,888,0,890,0,"low bq","NA"]
["UPN_Te4_013",1,36932359,"T","A","CSF3R","ENST00000373103","stop_gained","Aag/Tag|p.Lys731*/c.2191A>T",2189,23,2222,0.0103510351035104,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.4,19.26,1926,22,1956,0.0112474437627812,263,1,266,0.0037593984962406,"low bq","NA"]
["UPN_Te4_013",1,36932370,"T","A","CSF3R","ENST00000373103","missense_variant","gAg/gTg|p.Glu727Val/c.2180A>T",1922,20,1956,0.0102249488752556,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.5,18.6,1922,20,1956,0.0102249488752556,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",1,36932380,"T","A","CSF3R","ENST00000373103","missense_variant","Aca/Tca|p.Thr724Ser/c.2170A>T",6965,84,7071,0.0118795078489605,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.53,22.5,6965,84,7071,0.0118795078489605,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",1,36932380,"T","A","CSF3R","ENST00000373103","missense_variant","Aca/Tca|p.Thr724Ser/c.2170A>T",8370,95,8492,0.0111869995289684,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.73,19.19,8366,95,8488,0.0111922714420358,4,0,4,0,"low bq","NA"]
["UPN_Te4_013",1,36932380,"T","A","CSF3R","ENST00000373103","missense_variant","Aca/Tca|p.Thr724Ser/c.2170A>T",1923,21,1953,0.010752688172043,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.51,17.95,1923,21,1953,0.010752688172043,0,0,0,"NA","low bq","NA"]
["UPN_Te4_015",1,36932380,"T","A","CSF3R","ENST00000373103","missense_variant","Aca/Tca|p.Thr724Ser/c.2170A>T",5953,64,6048,0.0105820105820106,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.61,18.11,5953,64,6048,0.0105820105820106,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016",1,36932380,"T","A","CSF3R","ENST00000373103","missense_variant","Aca/Tca|p.Thr724Ser/c.2170A>T",6153,86,6252,0.0137555982085733,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.79,19.71,6153,86,6252,0.0137555982085733,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",1,36932386,"T","A","CSF3R","ENST00000373103","stop_gained","Aag/Tag|p.Lys722*/c.2164A>T",6944,96,7067,0.0135842648931654,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.39,19.05,6944,96,7067,0.0135842648931654,0,0,0,"NA","low bq","NA"]
["UPN_Te4_009",1,36932386,"T","A","CSF3R","ENST00000373103","stop_gained","Aag/Tag|p.Lys722*/c.2164A>T",3776,40,3830,0.010443864229765,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.63,20.12,3776,40,3830,0.010443864229765,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",1,36932386,"T","A","CSF3R","ENST00000373103","stop_gained","Aag/Tag|p.Lys722*/c.2164A>T",8336,120,8492,0.0141309467734338,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.51,18.15,8332,120,8488,0.0141376060320452,4,0,4,0,"low bq","NA"]
["UPN_Te4_013",1,36932386,"T","A","CSF3R","ENST00000373103","stop_gained","Aag/Tag|p.Lys722*/c.2164A>T",1922,23,1952,0.0117827868852459,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.3,17.65,1922,23,1952,0.0117827868852459,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",1,36932386,"T","A","CSF3R","ENST00000373103","stop_gained","Aag/Tag|p.Lys722*/c.2164A>T",9176,133,9354,0.0142185161428266,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.36,20.5,9176,133,9354,0.0142185161428266,0,0,0,"NA","low bq","NA"]
["UPN_Te4_015",1,36932386,"T","A","CSF3R","ENST00000373103","stop_gained","Aag/Tag|p.Lys722*/c.2164A>T",5943,70,6044,0.0115817339510258,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.47,19.39,5943,70,6044,0.0115817339510258,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016",1,36932386,"T","A","CSF3R","ENST00000373103","stop_gained","Aag/Tag|p.Lys722*/c.2164A>T",6128,79,6250,0.01264,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.4,19.48,6128,79,6250,0.01264,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",1,36932386,"T","A","CSF3R","ENST00000373103","stop_gained","Aag/Tag|p.Lys722*/c.2164A>T",7775,100,7901,0.0126566257435768,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.56,18.55,7775,100,7901,0.0126566257435768,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",1,36932389,"T","A","CSF3R","ENST00000373103","missense_variant","Acc/Tcc|p.Thr721Ser/c.2161A>T",6952,75,7068,0.0106112054329372,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.68,21.28,6952,75,7068,0.0106112054329372,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",1,36932389,"T","A","CSF3R","ENST00000373103","missense_variant","Acc/Tcc|p.Thr721Ser/c.2161A>T",9214,102,9355,0.0109032602886157,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.58,17.48,9214,102,9355,0.0109032602886157,0,0,0,"NA","low bq","NA"]
["UPN_Te4_015",1,36932389,"T","A","CSF3R","ENST00000373103","missense_variant","Acc/Tcc|p.Thr721Ser/c.2161A>T",5949,70,6045,0.0115798180314309,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.51,16.96,5949,70,6045,0.0115798180314309,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",1,36932418,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln711Leu/c.2132A>T",1909,20,1948,0.0102669404517454,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.48,16.2,1909,20,1948,0.0102669404517454,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",1,36932430,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln707Leu/c.2120A>T",6973,74,7091,0.0104357636440558,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.6,15.23,6943,74,7061,0.0104801019685597,30,0,30,0,"low bq","NA"]
["UPN_Te4_013",1,36932430,"T","A","CSF3R","ENST00000373103","missense_variant","cAg/cTg|p.Gln707Leu/c.2120A>T",1920,23,1955,0.0117647058823529,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.61,16.87,1912,23,1947,0.0118130457113508,8,0,8,0,"low bq","NA"]
["UPN_Te4_001",1,36933247,"A","C","CSF3R","ENST00000373103","missense_variant","Tcg/Gcg|p.Ser624Ala/c.1870T>G",7689,110,7826,0.0140557117301303,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.76,14.8,7689,110,7826,0.0140557117301303,0,0,0,"NA","low bq","NA"]
["UPN_Te4_003",1,36933247,"A","C","CSF3R","ENST00000373103","missense_variant","Tcg/Gcg|p.Ser624Ala/c.1870T>G",4128,44,4187,0.0105087174588011,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.46,15.61,4128,44,4187,0.0105087174588011,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",1,36933247,"A","C","CSF3R","ENST00000373103","missense_variant","Tcg/Gcg|p.Ser624Ala/c.1870T>G",9691,110,9841,0.0111777258408698,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.47,15.45,9691,110,9841,0.0111777258408698,0,0,0,"NA","low bq","NA"]
["UPN_Te4_012",1,36933247,"A","C","CSF3R","ENST00000373103","missense_variant","Tcg/Gcg|p.Ser624Ala/c.1870T>G",3205,45,3260,0.0138036809815951,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.59,14.69,3205,45,3260,0.0138036809815951,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",1,36933247,"A","C","CSF3R","ENST00000373103","missense_variant","Tcg/Gcg|p.Ser624Ala/c.1870T>G",2205,24,2237,0.0107286544479213,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.62,15.88,2205,24,2237,0.0107286544479213,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",1,36933247,"A","C","CSF3R","ENST00000373103","missense_variant","Tcg/Gcg|p.Ser624Ala/c.1870T>G",9396,119,9552,0.0124581239530988,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.68,14.86,9396,119,9552,0.0124581239530988,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016",1,36933247,"A","C","CSF3R","ENST00000373103","missense_variant","Tcg/Gcg|p.Ser624Ala/c.1870T>G",7254,95,7367,0.0128953441020768,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.7,14.78,7254,95,7367,0.0128953441020768,0,0,0,"NA","low bq","NA"]
["UPN_Te4_017",1,36933247,"A","C","CSF3R","ENST00000373103","missense_variant","Tcg/Gcg|p.Ser624Ala/c.1870T>G",2600,41,2644,0.0155068078668684,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.73,14.71,2600,41,2644,0.0155068078668684,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",1,36933247,"A","C","CSF3R","ENST00000373103","missense_variant","Tcg/Gcg|p.Ser624Ala/c.1870T>G",9100,101,9243,0.010927188142378,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.29,14.33,9100,101,9243,0.010927188142378,0,0,0,"NA","low bq","NA"]
["UPN_Te4_019",1,36933247,"A","C","CSF3R","ENST00000373103","missense_variant","Tcg/Gcg|p.Ser624Ala/c.1870T>G",3070,42,3120,0.0134615384615385,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.95,14.86,3070,42,3120,0.0134615384615385,0,0,0,"NA","low bq","NA"]
["UPN_Te4_022",1,36933247,"A","C","CSF3R","ENST00000373103","missense_variant","Tcg/Gcg|p.Ser624Ala/c.1870T>G",4600,49,4659,0.0105172783859197,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.59,14.29,4600,49,4659,0.0105172783859197,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",1,36933444,"T","A","CSF3R","ENST00000373103","missense_variant","Acc/Tcc|p.Thr615Ser/c.1843A>T",5783,61,5872,0.0103882833787466,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.83,22.66,5775,61,5864,0.0104024556616644,8,0,8,0,"low bq","NA"]
["UPN_Te4_011",1,36933444,"T","A","CSF3R","ENST00000373103","missense_variant","Acc/Tcc|p.Thr615Ser/c.1843A>T",7149,75,7244,0.0103533959138597,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.83,18.45,7149,75,7244,0.0103533959138597,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",1,36933491,"T","A","CSF3R","ENST00000373103","missense_variant","cAc/cTc|p.His599Leu/c.1796A>T",14207,150,14436,0.0103906899418121,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.9,20.71,6983,127,7135,0.0177995795374912,7224,23,7301,0.00315025338994658,"low bq","NA"]
["UPN_Te4_011",1,43814946,"T","A","MPL","ENST00000372470","stop_gained","tTg/tAg|p.Leu494*/c.1481T>A",14875,156,15110,0.0103242885506287,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.45,22.72,14875,156,15110,0.0103242885506287,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",1,43814946,"T","A","MPL","ENST00000372470","stop_gained","tTg/tAg|p.Leu494*/c.1481T>A",14510,150,14707,0.0101992248589107,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.4,24.39,14510,150,14707,0.0101992248589107,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",1,43814967,"T","A","MPL","ENST00000372470","missense_variant","gTg/gAg|p.Val501Glu/c.1502T>A",3423,35,3462,0.0101097631426921,0,0,0,1,0,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.09,18.09,3423,35,3462,0.0101097631426921,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",1,43814988,"T","A","MPL","ENST00000372470","missense_variant","cTg/cAg|p.Leu508Gln/c.1523T>A",3409,37,3463,0.0106843777071903,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.16,21.14,3409,37,3463,0.0106843777071903,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",1,43815013,"G","T","MPL","ENST00000372470","missense_variant","caG/caT|p.Gln516His/c.1548G>T",25013,329,25391,0.0129573470914891,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.44,15.14,12673,6,12718,0.000471772291240761,12340,323,12673,0.0254872563718141,"low bq","NA"]
["UPN_Te4_002",1,43815013,"G","T","MPL","ENST00000372470","missense_variant","caG/caT|p.Gln516His/c.1548G>T",19849,208,20078,0.010359597569479,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.09,15.45,10094,8,10120,0.000790513833992095,9755,200,9958,0.0200843542880096,"low bq","NA"]
["UPN_Te4_003",1,43815013,"G","T","MPL","ENST00000372470","missense_variant","caG/caT|p.Gln516His/c.1548G>T",16576,205,16804,0.0121994763151631,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32,15.04,8424,4,8445,0.000473653049141504,8152,201,8359,0.0240459385093911,"low bq","NA"]
["UPN_Te4_005",1,43815013,"G","T","MPL","ENST00000372470","missense_variant","caG/caT|p.Gln516His/c.1548G>T",21030,235,21313,0.0110261342842397,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.13,15.36,10718,6,10754,0.000557931932304259,10312,229,10559,0.0216876598162705,"low bq","NA"]
["UPN_Te4_007",1,43815013,"G","T","MPL","ENST00000372470","missense_variant","caG/caT|p.Gln516His/c.1548G>T",21098,239,21360,0.011189138576779,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.01,14.9,10757,5,10780,0.000463821892393321,10341,234,10580,0.022117202268431,"low bq","NA"]
["UPN_Te4_011",1,43815013,"G","T","MPL","ENST00000372470","missense_variant","caG/caT|p.Gln516His/c.1548G>T",29721,339,30115,0.0112568487464719,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.35,15.09,15025,6,15076,0.000397983550013266,14696,333,15039,0.0221424296828247,"low bq","NA"]
["UPN_Te4_014",1,43815013,"G","T","MPL","ENST00000372470","missense_variant","caG/caT|p.Gln516His/c.1548G>T",31948,372,32400,0.0114814814814815,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.32,15.33,16144,9,16214,0.000555075860367584,15804,363,16186,0.0224267885827258,"low bq","NA"]
["UPN_Te4_015",1,43815013,"G","T","MPL","ENST00000372470","missense_variant","caG/caT|p.Gln516His/c.1548G>T",20751,232,21025,0.0110344827586207,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.21,15.17,10467,5,10509,0.000475782662479779,10284,227,10516,0.0215861544313427,"low bq","NA"]
["UPN_Te4_016",1,43815013,"G","T","MPL","ENST00000372470","missense_variant","caG/caT|p.Gln516His/c.1548G>T",22104,260,22417,0.011598340545122,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.36,15.47,11181,5,11230,0.000445235975066785,10923,255,11187,0.0227943148297131,"low bq","NA"]
["UPN_Te4_018",1,43815013,"G","T","MPL","ENST00000372470","missense_variant","caG/caT|p.Gln516His/c.1548G>T",28886,337,29276,0.0115111354010111,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.3,15.14,14630,7,14679,0.000476871721506915,14256,330,14597,0.0226073850791258,"low bq","NA"]
["UPN_Te4_007",1,115256491,"T","A","NRAS","ENST00000369535","missense_variant","Aca/Tca|p.Thr74Ser/c.220A>T",1004,23,1029,0.0223517978620019,0,0,0,1,1,0,0,1,3,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.79,26.83,958,22,981,0.0224260958205912,46,1,48,0.0208333333333333,"low bq","NA"]
["UPN_Te4_014",1,115256533,"C","A","NRAS","ENST00000369535","stop_gained","Gga/Tga|p.Gly60*/c.178G>T",1537,20,1564,0.0127877237851662,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.37,14.35,1495,20,1522,0.0131406044678055,42,0,42,0,"low bq","NA"]
["UPN_Te4_001",1,115256541,"T","A","NRAS","ENST00000369535","missense_variant","gAt/gTt|p.Asp57Val/c.170A>T",1043,24,1070,0.0224299065420561,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.88,14.54,1023,24,1050,0.0228571428571429,20,0,20,0,"low bq","NA"]
["UPN_Te4_011",1,115256541,"T","A","NRAS","ENST00000369535","missense_variant","gAt/gTt|p.Asp57Val/c.170A>T",1300,26,1334,0.0194902548725637,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.22,17.77,1285,26,1316,0.0197568389057751,15,0,18,0,"low bq","NA"]
["UPN_Te4_014",1,115256541,"T","A","NRAS","ENST00000369535","missense_variant","gAt/gTt|p.Asp57Val/c.170A>T",1516,34,1555,0.0218649517684887,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.3,15.06,1479,33,1514,0.0217965653896962,37,1,41,0.024390243902439,"low bq","NA"]
["UPN_Te4_015",1,115256541,"T","A","NRAS","ENST00000369535","missense_variant","gAt/gTt|p.Asp57Val/c.170A>T",805,21,838,0.0250596658711217,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.32,18,792,21,821,0.02557856272838,13,0,17,0,"low bq","NA"]
["UPN_Te4_018",2,25457284,"A","T","DNMT3A","ENST00000264709","missense_variant","tTt/tAt|p.Phe868Tyr/c.2603T>A",8014,92,8139,0.0113035999508539,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.91,24.66,0,0,0,"NA",8014,92,8139,0.0113035999508539,"low bq","NA"]
["UPN_Te4_001",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",43470,668,44422,0.0150375939849624,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.06,15.63,22460,13,22635,0.000574331787055445,21010,655,21787,0.0300637995134713,"low bq","NA"]
["UPN_Te4_003",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",31313,367,31825,0.0115318146111548,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.95,15.59,16031,4,16127,0.000248031251937744,15282,363,15698,0.0231239648362849,"low bq","NA"]
["UPN_Te4_004",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",39283,428,39878,0.0107327348412659,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28,15.44,20060,6,20167,0.000297515743541429,19223,422,19711,0.0214093653290041,"low bq","NA"]
["UPN_Te4_005",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",43811,511,44599,0.0114576560012556,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.99,15.1,22429,5,22603,0.000221209573950361,21382,506,21996,0.0230041825786507,"low bq","NA"]
["UPN_Te4_006",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",44237,480,44980,0.0106714095153402,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.9,15.36,22614,4,22780,0.000175592625109745,21623,476,22200,0.0214414414414414,"low bq","NA"]
["UPN_Te4_007",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",53284,645,54178,0.0119052013732511,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.93,16.07,27237,17,27409,0.000620234229632602,26047,628,26769,0.0234599723560835,"low bq","NA"]
["UPN_Te4_009",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",18980,195,19269,0.0101198816752296,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.96,16.56,9701,7,9767,0.000716699088768301,9279,188,9502,0.0197853083561355,"low bq","NA"]
["UPN_Te4_010",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",50594,525,51360,0.0102219626168224,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28,15.33,25832,6,25987,0.000230884673105784,24762,519,25373,0.0204548141725456,"low bq","NA"]
["UPN_Te4_011",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",46510,689,47500,0.0145052631578947,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.99,15.16,23963,4,24137,0.000165720677797572,22547,685,23363,0.0293198647433977,"low bq","NA"]
["UPN_Te4_012",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",17291,273,17638,0.0154779453452772,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.93,16.36,8899,1,8941,0.000111844312716698,8392,272,8697,0.0312751523513855,"low bq","NA"]
["UPN_Te4_013",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",23851,324,24308,0.0133289452032253,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.98,15.16,12278,3,12358,0.000242757727787668,11573,321,11950,0.0268619246861925,"low bq","NA"]
["UPN_Te4_014",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",46734,682,47751,0.0142824234047454,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.08,15.63,24090,10,24293,0.000411641213518297,22644,672,23458,0.0286469434734419,"low bq","NA"]
["UPN_Te4_015",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",36265,548,37052,0.0147900248299687,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.05,16.06,18689,16,18848,0.000848896434634975,17576,532,18204,0.029224346297517,"low bq","NA"]
["UPN_Te4_016",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",38915,557,39714,0.0140252807574155,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.05,15.61,20038,17,20191,0.000841959288792036,18877,540,19523,0.0276596834502894,"low bq","NA"]
["UPN_Te4_017",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",18949,259,19283,0.0134315199917025,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.97,16.08,9718,3,9758,0.000307440049190408,9231,256,9525,0.0268766404199475,"low bq","NA"]
["UPN_Te4_018",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",42247,663,43153,0.0153639376173151,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.95,15.91,21794,12,21942,0.000546896363139185,20453,651,21211,0.0306916222714629,"low bq","NA"]
["UPN_Te4_019",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",17601,268,17943,0.0149361868137993,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.91,16.51,9018,2,9060,0.00022075055187638,8583,266,8883,0.0299448384554768,"low bq","NA"]
["UPN_Te4_020",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",26254,410,26755,0.0153242384601009,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.87,16.51,13465,6,13518,0.000443852640923213,12789,404,13237,0.0305205106897333,"low bq","NA"]
["UPN_Te4_021",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",29530,468,30127,0.0155342383908122,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.89,15.97,15175,4,15244,0.000262398320650748,14355,464,14883,0.0311765101122086,"low bq","NA"]
["UPN_Te4_022",2,25458636,"T","G","DNMT3A","ENST00000264709","missense_variant","cAg/cCg|p.Gln846Pro/c.2537A>C",27394,467,27965,0.0166994457357411,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.85,16.45,14062,3,14121,0.000212449543233482,13332,464,13844,0.0335163247616296,"low bq","NA"]
["UPN_Te4_001",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",18947,270,19367,0.0139412402540404,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.96,14.45,9499,258,9817,0.0262809412244066,9448,12,9550,0.0012565445026178,"low bq","NA"]
["UPN_Te4_002",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",20196,229,20574,0.0111305531253038,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.16,15.21,10112,217,10385,0.0208955223880597,10084,12,10189,0.00117774070075572,"low bq","NA"]
["UPN_Te4_003",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",15139,156,15388,0.0101377696906681,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.3,16.51,7594,141,7769,0.018149053932295,7545,15,7619,0.0019687623047644,"low bq","NA"]
["UPN_Te4_004",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",15911,170,16189,0.0105009574402372,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.17,14.44,7954,166,8165,0.0203306797305573,7957,4,8024,0.000498504486540379,"low bq","NA"]
["UPN_Te4_005",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",20604,228,21016,0.0108488770460601,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.1,14.75,10291,218,10589,0.0205874020209652,10313,10,10427,0.000959048623765225,"low bq","NA"]
["UPN_Te4_006",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",21784,259,22185,0.011674554879423,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.93,14.47,10897,249,11204,0.0222242056408426,10887,10,10981,0.00091066387396412,"low bq","NA"]
["UPN_Te4_007",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",21162,229,21555,0.0106239851542566,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.25,15.01,10595,219,10881,0.0201268265784395,10567,10,10674,0.000936855911560802,"low bq","NA"]
["UPN_Te4_008",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",28904,334,29435,0.0113470358416851,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.33,14.75,14438,321,14847,0.0216205293998788,14466,13,14588,0.000891143405538799,"low bq","NA"]
["UPN_Te4_011",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",23359,278,23851,0.0116556957779548,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.95,14.49,11731,267,12076,0.0221099701888042,11628,11,11775,0.000934182590233546,"low bq","NA"]
["UPN_Te4_012",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",8134,104,8267,0.0125801378976654,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.98,14.31,4043,97,4154,0.0233509870004815,4091,7,4113,0.00170192073911986,"low bq","NA"]
["UPN_Te4_013",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",5242,55,5350,0.0102803738317757,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.01,14.65,2635,52,2709,0.0191952750092285,2607,3,2641,0.0011359333585763,"low bq","NA"]
["UPN_Te4_014",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",25799,333,26481,0.0125750538121672,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27,15,12948,315,13413,0.0234846790427197,12851,18,13068,0.00137741046831956,"low bq","NA"]
["UPN_Te4_015",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",18132,249,18529,0.0134383938690701,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.07,14.87,9099,232,9385,0.0247202983484283,9033,17,9144,0.0018591426071741,"low bq","NA"]
["UPN_Te4_016",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",16734,206,17073,0.0120658349440637,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27,14.78,8421,195,8663,0.0225095232598407,8313,11,8410,0.00130796670630202,"low bq","NA"]
["UPN_Te4_017",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",7507,90,7625,0.0118032786885246,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.15,15.1,3737,84,3836,0.0218978102189781,3770,6,3789,0.00158353127474268,"low bq","NA"]
["UPN_Te4_018",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",24135,297,24691,0.012028674415779,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.93,14.87,12107,283,12490,0.022658126501201,12028,14,12201,0.00114744693057946,"low bq","NA"]
["UPN_Te4_019",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",7397,107,7543,0.0141853373989129,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.99,14.78,3673,105,3792,0.0276898734177215,3724,2,3751,0.000533191149026926,"low bq","NA"]
["UPN_Te4_020",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",12737,174,12967,0.0134186781830801,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.07,15.06,6327,168,6517,0.0257787325456498,6410,6,6450,0.000930232558139535,"low bq","NA"]
["UPN_Te4_021",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",16078,216,16369,0.0131956747510538,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.11,15.41,7987,206,8226,0.025042548018478,8091,10,8143,0.00122804863072578,"low bq","NA"]
["UPN_Te4_022",2,25462051,"A","C","DNMT3A","ENST00000264709","missense_variant","Tca/Gca|p.Ser786Ala/c.2356T>G",12630,167,12862,0.0129839838283315,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.91,14.89,6283,158,6470,0.0244204018547141,6347,9,6392,0.00140801001251564,"low bq","NA"]
["UPN_Te4_016",2,25462053,"A","T","DNMT3A","ENST00000264709","missense_variant","gTg/gAg|p.Val785Glu/c.2354T>A",16719,199,17076,0.0116537830873741,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.84,19.58,8503,45,8652,0.00520110957004161,8216,154,8424,0.0182811016144349,"low bq","NA"]
["UPN_Te4_011",2,25462064,"A","T","DNMT3A","ENST00000264709","missense_variant","gaT/gaA|p.Asp781Glu/c.2343T>A",23521,246,23900,0.0102928870292887,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.33,20.12,11915,80,12058,0.00663459943605905,11606,166,11842,0.0140179023813545,"low bq","NA"]
["UPN_Te4_001",2,25462074,"A","T","DNMT3A","ENST00000264709","missense_variant","gTg/gAg|p.Val778Glu/c.2333T>A",19072,197,19431,0.0101384385775308,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.44,19.54,9695,43,9813,0.00438194232141037,9377,154,9618,0.0160116448326055,"low bq","NA"]
["UPN_Te4_011",2,25462074,"A","T","DNMT3A","ENST00000264709","missense_variant","gTg/gAg|p.Val778Glu/c.2333T>A",23443,266,23907,0.0111264483205756,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.39,19.17,11920,45,12058,0.00373196218278321,11523,221,11849,0.0186513629842181,"low bq","NA"]
["UPN_Te4_013",2,25462074,"A","T","DNMT3A","ENST00000264709","missense_variant","gTg/gAg|p.Val778Glu/c.2333T>A",5255,54,5360,0.0100746268656716,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.3,15.8,2674,7,2707,0.00258588843738456,2581,47,2653,0.0177157934413871,"low bq","NA"]
["UPN_Te4_014",2,25462074,"A","T","DNMT3A","ENST00000264709","missense_variant","gTg/gAg|p.Val778Glu/c.2333T>A",25981,344,26543,0.0129601024752289,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.53,19.87,13207,67,13381,0.00500709961886257,12774,277,13162,0.0210454338246467,"low bq","NA"]
["UPN_Te4_015",2,25462074,"A","T","DNMT3A","ENST00000264709","missense_variant","gTg/gAg|p.Val778Glu/c.2333T>A",18134,238,18563,0.0128212034692668,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.5,19.12,9235,41,9364,0.00437847073900043,8899,197,9199,0.0214153712360039,"low bq","NA"]
["UPN_Te4_016",2,25462074,"A","T","DNMT3A","ENST00000264709","missense_variant","gTg/gAg|p.Val778Glu/c.2333T>A",16776,191,17119,0.0111571937613178,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.56,17.89,8545,33,8648,0.0038159111933395,8231,158,8471,0.0186518710895998,"low bq","NA"]
["UPN_Te4_018",2,25462074,"A","T","DNMT3A","ENST00000264709","missense_variant","gTg/gAg|p.Val778Glu/c.2333T>A",24246,265,24728,0.0107165965706891,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.3,18.27,12321,38,12463,0.00304902511433844,11925,227,12265,0.0185079494496535,"low bq","NA"]
["UPN_Te4_001",2,25462080,"T","G","DNMT3A","ENST00000264709","missense_variant","aAc/aCc|p.Asn776Thr/c.2327A>C",19028,204,19450,0.0104884318766067,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.18,14.7,9595,114,9812,0.0116184264166327,9433,90,9638,0.00933803693712388,"low bq","NA"]
["UPN_Te4_002",2,25462080,"T","G","DNMT3A","ENST00000264709","missense_variant","aAc/aCc|p.Asn776Thr/c.2327A>C",20251,226,20608,0.0109666149068323,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.66,14.79,10115,188,10374,0.0181222286485444,10136,38,10234,0.00371311315223764,"low bq","NA"]
["UPN_Te4_004",2,25462080,"T","G","DNMT3A","ENST00000264709","missense_variant","aAc/aCc|p.Asn776Thr/c.2327A>C",15946,201,16223,0.0123898169265857,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.38,14.69,7944,165,8154,0.0202354672553348,8002,36,8069,0.00446151939521626,"low bq","NA"]
["UPN_Te4_005",2,25462080,"T","G","DNMT3A","ENST00000264709","missense_variant","aAc/aCc|p.Asn776Thr/c.2327A>C",20681,219,21050,0.0104038004750594,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.38,14.8,10326,172,10580,0.0162570888468809,10355,47,10470,0.00448901623686724,"low bq","NA"]
["UPN_Te4_006",2,25462080,"T","G","DNMT3A","ENST00000264709","missense_variant","aAc/aCc|p.Asn776Thr/c.2327A>C",21824,264,22227,0.011877446349035,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.96,14.87,10917,199,11193,0.0177789689984812,10907,65,11034,0.00589088272611927,"low bq","NA"]
["UPN_Te4_007",2,25462080,"T","G","DNMT3A","ENST00000264709","missense_variant","aAc/aCc|p.Asn776Thr/c.2327A>C",21200,246,21590,0.0113941639647985,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.44,14.78,10601,182,10868,0.0167464114832536,10599,64,10722,0.0059690356276814,"low bq","NA"]
["UPN_Te4_011",2,25462080,"T","G","DNMT3A","ENST00000264709","missense_variant","aAc/aCc|p.Asn776Thr/c.2327A>C",23478,244,23924,0.0101989633840495,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.28,14.14,11839,135,12058,0.0111958865483496,11639,109,11866,0.00918590932074836,"low bq","NA"]
["UPN_Te4_013",2,25462080,"T","G","DNMT3A","ENST00000264709","missense_variant","aAc/aCc|p.Asn776Thr/c.2327A>C",5251,55,5365,0.0102516309412861,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.46,14.56,2646,35,2707,0.0129294421869228,2605,20,2658,0.00752445447705041,"low bq","NA"]
["UPN_Te4_015",2,25462080,"T","G","DNMT3A","ENST00000264709","missense_variant","aAc/aCc|p.Asn776Thr/c.2327A>C",18218,195,18581,0.0104945912491255,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.61,15.18,9186,107,9369,0.0114206425445619,9032,88,9212,0.00955275727312201,"low bq","NA"]
["UPN_Te4_018",2,25462080,"T","G","DNMT3A","ENST00000264709","missense_variant","aAc/aCc|p.Asn776Thr/c.2327A>C",24213,274,24751,0.0110702597874833,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.26,14.19,12203,141,12465,0.0113116726835138,12010,133,12286,0.0108253296434967,"low bq","NA"]
["UPN_Te4_001",2,25463226,"T","A","DNMT3A","ENST00000264709","missense_variant","gAg/gTg|p.Glu756Val/c.2267A>T",38372,492,39046,0.0126005224606874,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.72,17.02,19766,67,19920,0.00336345381526104,18606,425,19126,0.0222210603367144,"low bq","NA"]
["UPN_Te4_002",2,25463226,"T","A","DNMT3A","ENST00000264709","missense_variant","gAg/gTg|p.Glu756Val/c.2267A>T",39310,606,40063,0.015126176272371,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.82,15.62,20189,51,20304,0.00251182033096927,19121,555,19759,0.0280884660154866,"low bq","NA"]
["UPN_Te4_003",2,25463226,"T","A","DNMT3A","ENST00000264709","missense_variant","gAg/gTg|p.Glu756Val/c.2267A>T",27348,441,27920,0.0157951289398281,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.73,14.99,14066,28,14155,0.00197809961144472,13282,413,13765,0.0300036324010171,"low bq","NA"]
["UPN_Te4_004",2,25463226,"T","A","DNMT3A","ENST00000264709","missense_variant","gAg/gTg|p.Glu756Val/c.2267A>T",34915,586,35645,0.0164398933931828,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.56,14.99,18001,49,18108,0.00270598630439585,16914,537,17537,0.0306209728003649,"low bq","NA"]
["UPN_Te4_005",2,25463226,"T","A","DNMT3A","ENST00000264709","missense_variant","gAg/gTg|p.Glu756Val/c.2267A>T",37749,584,38488,0.0151735605903139,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.46,15.08,19432,44,19543,0.00225144553036893,18317,540,18945,0.0285035629453682,"low bq","NA"]
["UPN_Te4_006",2,25463226,"T","A","DNMT3A","ENST00000264709","missense_variant","gAg/gTg|p.Glu756Val/c.2267A>T",41087,694,41982,0.0165308941927493,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.4,14.75,21179,40,21302,0.00187775795699934,19908,654,20680,0.0316247582205029,"low bq","NA"]
["UPN_Te4_007",2,25463226,"T","A","DNMT3A","ENST00000264709","missense_variant","gAg/gTg|p.Glu756Val/c.2267A>T",50128,777,51151,0.0151903188598463,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.7,15.22,25752,68,25930,0.00262244504435017,24376,709,25221,0.028111494389596,"low bq","NA"]
["UPN_Te4_008",2,25463226,"T","A","DNMT3A","ENST00000264709","missense_variant","gAg/gTg|p.Glu756Val/c.2267A>T",57320,908,58488,0.0155245520448639,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.75,15.3,29485,86,29689,0.00289669574589915,27835,822,28799,0.0285426577311712,"low bq","NA"]
["UPN_Te4_009",2,25463226,"T","A","DNMT3A","ENST00000264709","missense_variant","gAg/gTg|p.Glu756Val/c.2267A>T",18098,303,18470,0.0164049810503519,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.51,14.78,9311,21,9363,0.00224287087471964,8787,282,9107,0.0309651916108488,"low bq","NA"]
["UPN_Te4_010",2,25463226,"T","A","DNMT3A","ENST00000264709","missense_variant","gAg/gTg|p.Glu756Val/c.2267A>T",49387,822,50379,0.0163163222771393,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.59,15.09,25437,63,25581,0.00246276533364607,23950,759,24798,0.0306073070408904,"low bq","NA"]
["UPN_Te4_011",2,25463226,"T","A","DNMT3A","ENST00000264709","missense_variant","gAg/gTg|p.Glu756Val/c.2267A>T",43986,520,44693,0.0116349316447766,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.82,16.93,22636,65,22792,0.00285187785187785,21350,455,21901,0.0207753070636044,"low bq","NA"]
["UPN_Te4_013",2,25463226,"T","A","DNMT3A","ENST00000264709","missense_variant","gAg/gTg|p.Glu756Val/c.2267A>T",10908,128,11117,0.0115138976342538,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.85,17.29,5622,15,5675,0.0026431718061674,5286,113,5442,0.0207644248438074,"low bq","NA"]
["UPN_Te4_014",2,25463226,"T","A","DNMT3A","ENST00000264709","missense_variant","gAg/gTg|p.Glu756Val/c.2267A>T",45897,527,46636,0.0113002830431426,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.96,16.88,23648,77,23829,0.00323135675017835,22249,450,22807,0.0197307844082957,"low bq","NA"]
["UPN_Te4_015",2,25463226,"T","A","DNMT3A","ENST00000264709","missense_variant","gAg/gTg|p.Glu756Val/c.2267A>T",30735,327,31192,0.0104834572967428,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.97,16.05,15825,33,15925,0.00207221350078493,14910,294,15267,0.0192572214580468,"low bq","NA"]
["UPN_Te4_016",2,25463226,"T","A","DNMT3A","ENST00000264709","missense_variant","gAg/gTg|p.Glu756Val/c.2267A>T",32915,407,33479,0.0121568744586158,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.85,17.1,16974,55,17106,0.00321524611247515,15941,352,16373,0.0214988090148415,"low bq","NA"]
["UPN_Te4_018",2,25463226,"T","A","DNMT3A","ENST00000264709","missense_variant","gAg/gTg|p.Glu756Val/c.2267A>T",37952,488,38595,0.0126441248866433,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.85,16.72,19538,63,19675,0.00320203303684879,18414,425,18920,0.0224630021141649,"low bq","NA"]
["UPN_Te4_018",2,25463293,"A","T","DNMT3A","ENST00000264709","missense_variant","Ttc/Atc|p.Phe734Ile/c.2200T>A",19118,202,19397,0.0104139815435377,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.75,17.38,23,0,24,0,19095,202,19373,0.0104268827749961,"low bq","NA"]
["UPN_Te4_001",2,25463297,"A","T","DNMT3A","ENST00000264709","missense_variant","ttT/ttA|p.Phe732Leu/c.2196T>A",19275,214,19586,0.0109261717553354,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.03,19.14,0,0,0,"NA",19275,214,19586,0.0109261717553354,"low bq","NA"]
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["UPN_Te4_017",2,25464483,"T","G","DNMT3A","ENST00000264709","missense_variant","cAc/cCc|p.His677Pro/c.2030A>C",4510,51,4584,0.0111256544502618,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.97,17.88,4410,0,4432,0,100,51,152,0.335526315789474,"low bq","NA"]
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["UPN_Te4_004",2,25467031,"T","A","DNMT3A","ENST00000264709","missense_variant","cAg/cTg|p.Gln615Leu/c.1844A>T",7655,93,7780,0.0119537275064267,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.22,17.55,7655,93,7780,0.0119537275064267,0,0,0,"NA","low bq","NA"]
["UPN_Te4_006",2,25467031,"T","A","DNMT3A","ENST00000264709","missense_variant","cAg/cTg|p.Gln615Leu/c.1844A>T",9468,105,9599,0.0109386394416085,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.14,16.25,9468,105,9599,0.0109386394416085,0,0,0,"NA","low bq","NA"]
["UPN_Te4_008",2,25467031,"T","A","DNMT3A","ENST00000264709","missense_variant","cAg/cTg|p.Gln615Leu/c.1844A>T",15162,173,15384,0.0112454498179927,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.21,16.69,15162,173,15384,0.0112454498179927,0,0,0,"NA","low bq","NA"]
["UPN_Te4_009",2,25467031,"T","A","DNMT3A","ENST00000264709","missense_variant","cAg/cTg|p.Gln615Leu/c.1844A>T",4670,58,4738,0.0122414520894892,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.89,18.34,4664,58,4732,0.0122569737954353,6,0,6,0,"low bq","NA"]
["UPN_Te4_010",2,25467031,"T","A","DNMT3A","ENST00000264709","missense_variant","cAg/cTg|p.Gln615Leu/c.1844A>T",10656,110,10787,0.0101974599054417,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.13,17.45,10656,110,10787,0.0101974599054417,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",2,25467031,"T","A","DNMT3A","ENST00000264709","missense_variant","cAg/cTg|p.Gln615Leu/c.1844A>T",12024,173,12239,0.0141351417599477,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.61,16.82,12024,173,12239,0.0141351417599477,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",2,25467031,"T","A","DNMT3A","ENST00000264709","missense_variant","cAg/cTg|p.Gln615Leu/c.1844A>T",3133,43,3190,0.0134796238244514,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.67,15.72,3133,43,3190,0.0134796238244514,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",2,25467031,"T","A","DNMT3A","ENST00000264709","missense_variant","cAg/cTg|p.Gln615Leu/c.1844A>T",12482,184,12719,0.0144665461121157,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.61,16.73,12482,184,12719,0.0144665461121157,0,0,0,"NA","low bq","NA"]
["UPN_Te4_015",2,25467031,"T","A","DNMT3A","ENST00000264709","missense_variant","cAg/cTg|p.Gln615Leu/c.1844A>T",8382,123,8531,0.0144180049232212,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.67,16.52,8382,123,8531,0.0144180049232212,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016",2,25467031,"T","A","DNMT3A","ENST00000264709","missense_variant","cAg/cTg|p.Gln615Leu/c.1844A>T",8891,148,9073,0.0163121349057644,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.62,17.7,8891,148,9073,0.0163121349057644,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",2,25467031,"T","A","DNMT3A","ENST00000264709","missense_variant","cAg/cTg|p.Gln615Leu/c.1844A>T",11511,186,11726,0.0158621865938939,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.51,17.51,11511,186,11726,0.0158621865938939,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",2,25467034,"T","A","DNMT3A","ENST00000264709","missense_variant","gAc/gTc|p.Asp614Val/c.1841A>T",3148,32,3187,0.0100407907122686,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.62,19.53,3148,32,3187,0.0100407907122686,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",2,25467034,"T","A","DNMT3A","ENST00000264709","missense_variant","gAc/gTc|p.Asp614Val/c.1841A>T",11559,118,11721,0.010067400392458,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.82,17.08,11559,118,11721,0.010067400392458,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",2,25467037,"T","A","DNMT3A","ENST00000264709","missense_variant","cAc/cTc|p.His613Leu/c.1838A>T",10211,155,10414,0.0148838102554254,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.13,18.68,10211,155,10414,0.0148838102554254,0,0,0,"NA","low bq","NA"]
["UPN_Te4_006",2,25467037,"T","A","DNMT3A","ENST00000264709","missense_variant","cAc/cTc|p.His613Leu/c.1838A>T",9464,97,9595,0.0101094319958312,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.01,15.45,9464,97,9595,0.0101094319958312,0,0,0,"NA","low bq","NA"]
["UPN_Te4_007",2,25467037,"T","A","DNMT3A","ENST00000264709","missense_variant","cAc/cTc|p.His613Leu/c.1838A>T",11734,138,11913,0.0115839838831529,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.09,16.82,11734,138,11913,0.0115839838831529,0,0,0,"NA","low bq","NA"]
["UPN_Te4_009",2,25467037,"T","A","DNMT3A","ENST00000264709","missense_variant","cAc/cTc|p.His613Leu/c.1838A>T",4665,56,4737,0.0118218281612835,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.84,17.91,4659,56,4731,0.0118368209680829,6,0,6,0,"low bq","NA"]
["UPN_Te4_011",2,25467037,"T","A","DNMT3A","ENST00000264709","missense_variant","cAc/cTc|p.His613Leu/c.1838A>T",11980,178,12224,0.0145615183246073,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.81,17.25,11980,178,12224,0.0145615183246073,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",2,25467037,"T","A","DNMT3A","ENST00000264709","missense_variant","cAc/cTc|p.His613Leu/c.1838A>T",3124,45,3187,0.0141198619391277,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.93,15.53,3124,45,3187,0.0141198619391277,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",2,25467037,"T","A","DNMT3A","ENST00000264709","missense_variant","cAc/cTc|p.His613Leu/c.1838A>T",12515,163,12711,0.012823538667296,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.99,17.1,12515,163,12711,0.012823538667296,0,0,0,"NA","low bq","NA"]
["UPN_Te4_015",2,25467037,"T","A","DNMT3A","ENST00000264709","missense_variant","cAc/cTc|p.His613Leu/c.1838A>T",8373,112,8524,0.013139371187236,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.98,17.16,8373,112,8524,0.013139371187236,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016",2,25467037,"T","A","DNMT3A","ENST00000264709","missense_variant","cAc/cTc|p.His613Leu/c.1838A>T",8895,134,9068,0.0147772386413763,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33,17.99,8895,134,9068,0.0147772386413763,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",2,25467037,"T","A","DNMT3A","ENST00000264709","missense_variant","cAc/cTc|p.His613Leu/c.1838A>T",11532,150,11720,0.0127986348122867,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.05,16.67,11532,150,11720,0.0127986348122867,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",2,25467040,"T","A","DNMT3A","ENST00000264709","missense_variant","aAc/aTc|p.Asn612Ile/c.1835A>T",10236,127,10414,0.0121951219512195,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.19,16.54,10236,127,10414,0.0121951219512195,0,0,0,"NA","low bq","NA"]
["UPN_Te4_010",2,25467040,"T","A","DNMT3A","ENST00000264709","missense_variant","aAc/aTc|p.Asn612Ile/c.1835A>T",10603,110,10783,0.0102012426968376,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.71,20.91,10603,110,10783,0.0102012426968376,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",2,25467040,"T","A","DNMT3A","ENST00000264709","missense_variant","aAc/aTc|p.Asn612Ile/c.1835A>T",11962,150,12220,0.0122749590834697,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.7,16.01,11962,150,12220,0.0122749590834697,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",2,25467040,"T","A","DNMT3A","ENST00000264709","missense_variant","aAc/aTc|p.Asn612Ile/c.1835A>T",3127,39,3186,0.012241054613936,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.84,15.72,3127,39,3186,0.012241054613936,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",2,25467040,"T","A","DNMT3A","ENST00000264709","missense_variant","aAc/aTc|p.Asn612Ile/c.1835A>T",12492,134,12709,0.0105437091824691,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.13,16.28,12492,134,12709,0.0105437091824691,0,0,0,"NA","low bq","NA"]
["UPN_Te4_015",2,25467040,"T","A","DNMT3A","ENST00000264709","missense_variant","aAc/aTc|p.Asn612Ile/c.1835A>T",8346,103,8523,0.0120849466150417,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.96,16.57,8346,103,8523,0.0120849466150417,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016",2,25467040,"T","A","DNMT3A","ENST00000264709","missense_variant","aAc/aTc|p.Asn612Ile/c.1835A>T",8866,113,9065,0.012465526751241,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.75,17.77,8866,113,9065,0.012465526751241,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",2,25467040,"T","A","DNMT3A","ENST00000264709","missense_variant","aAc/aTc|p.Asn612Ile/c.1835A>T",11498,134,11715,0.0114383269312847,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.13,17.12,11498,134,11715,0.0114383269312847,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",2,25467041,"T","A","DNMT3A","ENST00000264709","missense_variant","Aac/Tac|p.Asn612Tyr/c.1834A>T",12056,137,12219,0.0112120468123414,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.38,18.07,12056,137,12219,0.0112120468123414,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",2,25467041,"T","A","DNMT3A","ENST00000264709","missense_variant","Aac/Tac|p.Asn612Tyr/c.1834A>T",3145,34,3186,0.0106716886377903,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.29,18.06,3145,34,3186,0.0106716886377903,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",2,25467041,"T","A","DNMT3A","ENST00000264709","missense_variant","Aac/Tac|p.Asn612Tyr/c.1834A>T",11555,124,11714,0.0105856240396107,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.59,17.44,11555,124,11714,0.0105856240396107,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",2,25467043,"T","A","DNMT3A","ENST00000264709","missense_variant","aAt/aTt|p.Asn611Ile/c.1832A>T",10181,170,10411,0.0163288829123043,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.44,17.94,10181,170,10411,0.0163288829123043,0,0,0,"NA","low bq","NA"]
["UPN_Te4_002",2,25467043,"T","A","DNMT3A","ENST00000264709","missense_variant","aAt/aTt|p.Asn611Ile/c.1832A>T",9399,96,9543,0.0100597296447658,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.86,17.57,9399,96,9543,0.0100597296447658,0,0,0,"NA","low bq","NA"]
["UPN_Te4_003",2,25467043,"T","A","DNMT3A","ENST00000264709","missense_variant","aAt/aTt|p.Asn611Ile/c.1832A>T",6699,90,6817,0.0132022883966554,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.85,17.76,6699,90,6817,0.0132022883966554,0,0,0,"NA","low bq","NA"]
["UPN_Te4_004",2,25467043,"T","A","DNMT3A","ENST00000264709","missense_variant","aAt/aTt|p.Asn611Ile/c.1832A>T",7661,84,7776,0.0108024691358025,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.98,16.95,7661,84,7776,0.0108024691358025,0,0,0,"NA","low bq","NA"]
["UPN_Te4_005",2,25467043,"T","A","DNMT3A","ENST00000264709","missense_variant","aAt/aTt|p.Asn611Ile/c.1832A>T",9553,98,9682,0.0101218756455278,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.79,16.92,9553,98,9682,0.0101218756455278,0,0,0,"NA","low bq","NA"]
["UPN_Te4_007",2,25467043,"T","A","DNMT3A","ENST00000264709","missense_variant","aAt/aTt|p.Asn611Ile/c.1832A>T",11733,126,11911,0.0105784568885904,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.85,15.92,11733,126,11911,0.0105784568885904,0,0,0,"NA","low bq","NA"]
["UPN_Te4_008",2,25467043,"T","A","DNMT3A","ENST00000264709","missense_variant","aAt/aTt|p.Asn611Ile/c.1832A>T",15115,183,15382,0.011897022493824,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.77,17.1,15115,183,15382,0.011897022493824,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",2,25467058,"T","A","DNMT3A","ENST00000264709","missense_variant","cAg/cTg|p.Gln606Leu/c.1817A>T",12287,357,12693,0.0281257385960766,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.39,16.68,12287,357,12693,0.0281257385960766,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",2,25467079,"T","A","DNMT3A","ENST00000264709","missense_variant","gAg/gTg|p.Glu599Val/c.1796A>T",11469,158,11671,0.0135378288064433,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.78,15.87,11467,158,11669,0.0135401491130345,2,0,2,0,"low bq","NA"]
["UPN_Te4_001",2,25467469,"T","A","DNMT3A","ENST00000264709","missense_variant","tAc/tTc|p.Tyr536Phe/c.1607A>T",8640,104,8766,0.0118640200775724,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.44,19.23,8640,104,8766,0.0118640200775724,0,0,0,"NA","low bq","NA"]
["UPN_Te4_004",2,25469609,"A","T","DNMT3A","ENST00000264709","missense_variant","Tgc/Agc|p.Cys387Ser/c.1159T>A",4464,55,4535,0.0121278941565601,0,0,0,1,1,0,0,1,3,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.53,24.89,13,0,14,0,4451,55,4521,0.0121654501216545,"low bq","NA"]
["UPN_Te4_004",2,25470026,"A","C","DNMT3A","ENST00000264709","missense_variant","gTg/gGg|p.Val339Gly/c.1016T>G",8794,111,8973,0.0123704446673353,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.34,14.24,4396,70,4488,0.0155971479500891,4398,41,4485,0.00914158305462653,"low bq","NA"]
["UPN_Te4_012",2,25470546,"T","A","DNMT3A","ENST00000264709","missense_variant","Att/Ttt|p.Ile310Phe/c.928A>T",5284,62,5357,0.0115736419637857,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.86,15.65,2623,59,2686,0.0219657483246463,2661,3,2671,0.00112317484088356,"low bq","NA"]
["UPN_Te4_015",2,25470576,"G","C","DNMT3A","ENST00000264709","missense_variant","Ctg/Gtg|p.Leu300Val/c.898C>G",8663,182,8926,0.0203898722832176,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.82,14.46,4210,180,4430,0.0406320541760722,4453,2,4496,0.000444839857651246,"low bq","NA"]
["UPN_Te4_001",2,25470585,"A","T","DNMT3A","ENST00000264709","missense_variant","Tgg/Agg|p.Trp297Arg/c.889T>A",5956,73,6072,0.0120223978919631,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.66,23.47,9,0,11,0,5947,73,6061,0.0120442171258868,"low bq","NA"]
["UPN_Te4_012",2,25470992,"T","G","DNMT3A","ENST00000264709","missense_variant","Act/Cct|p.Thr257Pro/c.769A>C",11677,142,11870,0.0119629317607414,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.13,19.91,5785,27,5840,0.00462328767123288,5892,115,6030,0.0190713101160862,"low bq","NA"]
["UPN_Te4_009",2,25505377,"T","G","DNMT3A","ENST00000264709","missense_variant","gaA/gaC|p.Glu127Asp/c.381A>C",11484,342,11907,0.0287226001511716,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.94,14.5,5625,307,5967,0.0514496396849338,5859,35,5940,0.00589225589225589,"low bq","NA"]
["UPN_Te4_013",2,25505402,"T","G","DNMT3A","ENST00000264709","missense_variant","gAg/gCg|p.Glu119Ala/c.356A>C",4130,155,4324,0.0358464384828862,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.98,14.43,0,0,0,"NA",4130,155,4324,0.0358464384828862,"low bq","NA"]
["UPN_Te4_015",2,198266560,"G","T","SF3B1","ENST00000335508","missense_variant","gCa/gAa|p.Ala759Glu/c.2276C>A",6861,73,6939,0.0105202478743335,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.5,14.27,3501,12,3516,0.00341296928327645,3360,61,3423,0.0178206251825884,"low bq","NA"]
["UPN_Te4_014",2,198266748,"T","A","SF3B1","ENST00000335508","missense_variant","ttA/ttT|p.Leu728Phe/c.2184A>T",52459,631,53274,0.011844426924954,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.78,16.97,26219,255,26571,0.00959692898272553,26240,376,26703,0.0140808148897128,"low bq","NA"]
["UPN_Te4_010",2,198267285,"T","A","SF3B1","ENST00000335508","missense_variant","gAa/gTa|p.Glu691Val/c.2072A>T",4760,86,4921,0.0174761227392806,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.35,14.57,2019,84,2134,0.0393626991565136,2741,2,2787,0.000717617509867241,"low bq","NA"]
["UPN_Te4_013",2,198267298,"C","A","SF3B1","ENST00000335508","missense_variant","Gtt/Ttt|p.Val687Phe/c.2059G>T",2729,196,2931,0.0668713749573524,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.19,14.45,1023,195,1222,0.159574468085106,1706,1,1709,0.000585137507314219,"low bq","NA"]
["UPN_Te4_004",2,198267299,"T","A","SF3B1","ENST00000335508","missense_variant","ttA/ttT|p.Leu686Phe/c.2058A>T",2946,76,3027,0.0251073670300628,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.74,16.14,1098,73,1173,0.062233589087809,1848,3,1854,0.00161812297734628,"low bq","NA"]
["UPN_Te4_016",2,198267307,"T","A","SF3B1","ENST00000335508","stop_gained","Aga/Tga|p.Arg684*/c.2050A>T",4422,85,4518,0.018813634351483,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.74,15.22,1643,81,1729,0.0468478889531521,2779,4,2789,0.00143420580853352,"low bq","NA"]
["UPN_Te4_015",2,209113219,"A","T","IDH1","ENST00000345146","missense_variant","aaT/aaA|p.Asn96Lys/c.288T>A",10361,158,10552,0.0149734647460197,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.83,17.08,0,0,0,"NA",10361,158,10552,0.0149734647460197,"low bq","NA"]
["UPN_Te4_009",3,38182019,"A","T","MYD88","ENST00000417037","missense_variant","Acc/Tcc|p.Thr215Ser/c.643A>T",6423,72,6516,0.0110497237569061,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.11,18.17,0,0,0,"NA",6423,72,6516,0.0110497237569061,"low bq","NA"]
["UPN_Te4_002",3,38182718,"A","C","MYD88","ENST00000417037","missense_variant","Aac/Cac|p.Asn299His/c.895A>C",21918,223,22284,0.0100071800394902,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.95,14.75,11152,106,11292,0.0093871767623096,10766,117,10992,0.0106441048034935,"low bq","NA"]
["UPN_Te4_016",3,38182745,"A","T","MYD88","ENST00000417037","missense_variant","Act/Tct|p.Thr308Ser/c.922A>T",9330,107,9481,0.0112857293534437,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.96,16.18,20,0,23,0,9310,107,9458,0.011313174032565,"low bq","NA"]
["UPN_Te4_009",3,105452945,"G","T","CBLB","ENST00000264122","missense_variant","Cag/Aag|p.Gln371Lys/c.1111C>A",2422,154,2579,0.0597130670802637,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.85,14.38,1315,1,1317,0.000759301442672741,1107,153,1262,0.121236133122029,"low bq","NA"]
["UPN_Te4_019",3,128199968,"A","C","GATA2","ENST00000341105","missense_variant","tTc/tGc|p.Phe446Cys/c.1337T>G",2973,39,3022,0.0129053606882859,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.77,14.33,1481,35,1519,0.0230414746543779,1492,4,1503,0.00266134397870925,"low bq","NA"]
["UPN_Te4_001",3,128200007,"A","T","GATA2","ENST00000341105","missense_variant","cTg/cAg|p.Leu433Gln/c.1298T>A",4452,47,4527,0.010382151535233,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.52,17.62,0,0,0,"NA",4452,47,4527,0.010382151535233,"low bq","NA"]
["UPN_Te4_005",3,128200132,"T","A","GATA2","ENST00000341105","missense_variant","gaA/gaT|p.Glu391Asp/c.1173A>T",3355,37,3411,0.010847258868367,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.59,14,3355,37,3411,0.010847258868367,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016",3,128200742,"T","G","GATA2","ENST00000341105","missense_variant","Aca/Cca|p.Thr355Pro/c.1063A>C",2082,31,2122,0.0146088595664467,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.94,14.42,1068,3,1075,0.0027906976744186,1014,28,1047,0.0267430754536772,"low bq","NA"]
["UPN_Te4_016",3,128200761,"A","C","GATA2","ENST00000341105","missense_variant","tgT/tgG|p.Cys348Trp/c.1044T>G",2058,30,2129,0.0140911225927666,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",22.85,14,1040,10,1073,0.00931966449207828,1018,20,1056,0.0189393939393939,"low bq","NA"]
["UPN_Te4_019",3,128200766,"T","G","GATA2","ENST00000341105","missense_variant","Acc/Ccc|p.Thr347Pro/c.1039A>C",1208,57,1271,0.044846577498033,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.42,14.77,599,35,636,0.0550314465408805,609,22,635,0.0346456692913386,"low bq","NA"]
["UPN_Te4_016",3,128204663,"A","T","GATA2","ENST00000341105","missense_variant","Tac/Aac|p.Tyr260Asn/c.778T>A",13136,298,13596,0.0219182112385996,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.54,15.47,6968,12,7005,0.00171306209850107,6168,286,6591,0.0433925049309665,"low bq","NA"]
["UPN_Te4_006",3,128204685,"A","T","GATA2","ENST00000341105","stop_gained","taT/taA|p.Tyr252*/c.756T>A",13565,248,13854,0.017900967229681,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.06,16.43,6973,13,7010,0.00185449358059914,6592,235,6844,0.0343366452367037,"low bq","NA"]
["UPN_Te4_009",3,128204690,"A","T","GATA2","ENST00000341105","missense_variant","Tcc/Acc|p.Ser251Thr/c.751T>A",6361,364,6979,0.0521564694082247,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.81,14.39,3108,192,3498,0.0548885077186964,3253,172,3481,0.0494110887675955,"low bq","NA"]
["UPN_Te4_010",3,128204699,"T","G","GATA2","ENST00000341105","missense_variant","Acc/Ccc|p.Thr248Pro/c.742A>C",4801,289,5108,0.0565779169929522,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.19,14.32,0,0,0,"NA",4801,289,5108,0.0565779169929522,"low bq","NA"]
["UPN_Te4_003",3,128204705,"T","G","GATA2","ENST00000341105","missense_variant","Atc/Ctc|p.Ile246Leu/c.736A>C",4784,106,4910,0.0215885947046843,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.92,14.94,14,0,14,0,4770,106,4896,0.0216503267973856,"low bq","NA"]
["UPN_Te4_016",3,128204734,"A","T","GATA2","ENST00000341105","missense_variant","aTg/aAg|p.Met236Lys/c.707T>A",6804,106,6939,0.0152759763654705,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.81,20.83,22,1,23,0.0434782608695652,6782,105,6916,0.0151821862348178,"low bq","NA"]
["UPN_Te4_007",3,128204890,"T","C","GATA2","ENST00000341105","missense_variant","gAc/gGc|p.Asp184Gly/c.551A>G",422,27,481,0.0561330561330561,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.26,14,282,0,282,0,140,27,199,0.135678391959799,"low bq","NA"]
["UPN_Te4_010",3,128204999,"T","A","GATA2","ENST00000341105","missense_variant","Agc/Tgc|p.Ser148Cys/c.442A>T",2668,93,2797,0.0332499106185198,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.07,14.82,2586,93,2715,0.0342541436464088,82,0,82,0,"low bq","NA"]
["UPN_Te4_018",3,128205022,"A","C","GATA2","ENST00000341105","missense_variant","gTg/gGg|p.Val140Gly/c.419T>G",3864,62,3944,0.0157200811359026,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.92,14.89,3864,62,3944,0.0157200811359026,0,0,0,"NA","low bq","NA"]
["UPN_Te4_015",3,128205056,"A","T","GATA2","ENST00000341105","missense_variant","Tca/Aca|p.Ser129Thr/c.385T>A",5197,58,5304,0.0109351432880845,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.88,15.05,2612,8,2653,0.0030154542027893,2585,50,2651,0.01886080724255,"low bq","NA"]
["UPN_Te4_008",3,128205073,"T","G","GATA2","ENST00000341105","missense_variant","aAg/aCg|p.Lys123Thr/c.368A>C",8676,711,9474,0.0750474984167194,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.82,14.12,3866,699,4635,0.150809061488673,4810,12,4839,0.00247985120892746,"low bq","NA"]
["UPN_Te4_002",3,128205088,"A","C","GATA2","ENST00000341105","missense_variant","gTg/gGg|p.Val118Gly/c.353T>G",5250,206,5515,0.0373526745240254,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.86,14.35,2436,203,2661,0.0762871101089816,2814,3,2854,0.00105115627189909,"low bq","NA"]
["UPN_Te4_022",3,128205092,"T","G","GATA2","ENST00000341105","missense_variant","Acc/Ccc|p.Thr117Pro/c.349A>C",3800,88,3900,0.0225641025641026,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.91,14.16,1852,80,1938,0.0412796697626419,1948,8,1962,0.00407747196738022,"low bq","NA"]
["UPN_Te4_006",3,128205103,"T","G","GATA2","ENST00000341105","missense_variant","cAc/cCc|p.His113Pro/c.338A>C",3324,37,3379,0.0109499852027227,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.59,14.7,84,25,110,0.227272727272727,3240,12,3269,0.00367084735393087,"low bq","NA"]
["UPN_Te4_010",4,55144109,"G","T","PDGFRA","ENST00000257290","missense_variant","aaG/aaT|p.Lys646Asn/c.1938G>T",51767,2830,54706,0.0517310715460827,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.37,14.21,27679,15,27724,0.00054104746789785,24088,2815,26982,0.10432881180046,"low bq","NA"]
["UPN_Te4_013",4,55144109,"G","T","PDGFRA","ENST00000257290","missense_variant","aaG/aaT|p.Lys646Asn/c.1938G>T",17007,1101,18178,0.0605677192210364,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.53,14.26,9270,6,9287,0.000646064391084311,7737,1095,8891,0.123158249915645,"low bq","NA"]
["UPN_Te4_013",4,55561932,"T","A","KIT","ENST00000288135","missense_variant","Tat/Aat|p.Tyr108Asn/c.322T>A",6789,85,6892,0.0123331398723157,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.81,17.12,6789,85,6892,0.0123331398723157,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",4,55593478,"C","A","KIT","ENST00000288135","stop_gained","taC/taA|p.Tyr545*/c.1635C>A",25498,2341,27901,0.0839038027310849,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.98,15.15,14271,12,14308,0.000838691641039978,11227,2329,13593,0.171338188773633,"low bq","NA"]
["UPN_Te4_018",4,55593661,"T","A","KIT","ENST00000288135","missense_variant","cTt/cAt|p.Leu576His/c.1727T>A",26323,361,26838,0.0134510768313585,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.47,17.28,26323,361,26838,0.0134510768313585,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",4,106155218,"T","A","TET2","ENST00000380013","missense_variant","cTg/cAg|p.Leu40Gln/c.119T>A",36024,404,36587,0.0110421734495859,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.43,19.23,20134,355,20587,0.0172438917763637,15890,49,16000,0.0030625,"low bq","NA"]
["UPN_Te4_013",4,106157100,"T","A","TET2","ENST00000380013","missense_variant","caT/caA|p.His667Gln/c.2001T>A",35484,392,36264,0.0108096183542908,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.26,17.95,17383,347,17949,0.0193325533455903,18101,45,18315,0.00245700245700246,"low bq","NA"]
["UPN_Te4_014",4,106157202,"G","T","TET2","ENST00000380013","missense_variant","caG/caT|p.Gln701His/c.2103G>T",19405,219,19883,0.0110144344414827,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.16,15.11,10040,6,10086,0.000594883997620464,9365,213,9797,0.0217413493926712,"low bq","NA"]
["UPN_Te4_004",4,106158438,"T","A","TET2","ENST00000380013","missense_variant","gaT/gaA|p.Asp1113Glu/c.3339T>A",22238,482,22761,0.0211765739642371,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.57,16.69,10763,457,11241,0.0406547460190375,11475,25,11520,0.00217013888888889,"low bq","NA"]
["UPN_Te4_014",4,106180855,"T","A","TET2","ENST00000380013","missense_variant","Tac/Aac|p.Tyr1295Asn/c.3883T>A",36810,494,37426,0.0131993801100839,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.06,15.62,18946,30,19039,0.00157571301013709,17864,464,18387,0.0252352205362484,"low bq","NA"]
["UPN_Te4_013",4,106193853,"A","T","TET2","ENST00000380013","stop_gained","Aaa/Taa|p.Lys1439*/c.4315A>T",5742,61,5827,0.0104685086665523,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.19,15.62,0,0,0,"NA",5742,61,5827,0.0104685086665523,"low bq","NA"]
["UPN_Te4_006",4,106196333,"T","A","TET2","ENST00000380013","missense_variant","Tct/Act|p.Ser1556Thr/c.4666T>A",10256,121,10416,0.0116167434715822,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.83,15.27,4998,119,5144,0.0231337480559876,5258,2,5272,0.000379362670713202,"low bq","NA"]
["UPN_Te4_010",4,106196345,"T","A","TET2","ENST00000380013","missense_variant","Tat/Aat|p.Tyr1560Asn/c.4678T>A",10035,145,10215,0.0141948115516397,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.68,15.2,4870,139,5034,0.0276122367898292,5165,6,5181,0.00115807759119861,"low bq","NA"]
["UPN_Te4_020",4,106196347,"T","A","TET2","ENST00000380013","stop_gained","taT/taA|p.Tyr1560*/c.4680T>A",10443,113,10600,0.0106603773584906,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.5,14.5,5107,105,5243,0.0200267022696929,5336,8,5357,0.00149337315661751,"low bq","NA"]
["UPN_Te4_016",4,106197538,"T","A","TET2","ENST00000380013","missense_variant","caT/caA|p.His1957Gln/c.5871T>A",8430,105,8575,0.0122448979591837,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.47,16.79,8430,105,8575,0.0122448979591837,0,0,0,"NA","low bq","NA"]
["UPN_Te4_003",4,106197557,"T","A","TET2","ENST00000380013","missense_variant","Tac/Aac|p.Tyr1964Asn/c.5890T>A",6549,67,6635,0.0100979653353429,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.12,14.78,6549,67,6635,0.0100979653353429,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",4,153249482,"G","T","FBXW7","ENST00000281708","missense_variant","aaC/aaA|p.Asn432Lys/c.1296C>A",15618,276,15926,0.0173301519527816,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.96,16.54,7660,253,7927,0.0319162356503091,7958,23,7999,0.00287535941992749,"low bq","NA"]
["UPN_Te4_015",5,170837540,"G","T","NPM1","ENST00000517671","missense_variant","Gat/Tat|p.Asp286Tyr/c.856G>T",3990,48,4092,0.0117302052785924,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",22.25,14.52,3990,48,4092,0.0117302052785924,0,0,0,"NA","low bq","NA"]
["UPN_Te4_012",5,170837543,"C","A","NPM1","ENST00000517671","missense_variant","Ctc/Atc|p.Leu287Ile/c.859C>A",4553,153,4838,0.0316246382802811,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",18.52,14.16,4553,153,4838,0.0316246382802811,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018",5,170837546,"T","G","NPM1","ENST00000517671","missense_variant","Tgg/Ggg|p.Trp288Gly/c.862T>G",7177,143,7374,0.0193924599945755,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.59,14.56,7177,143,7374,0.0193924599945755,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",5,170837555,"A","T","NPM1","ENST00000517671","missense_variant","Agg/Tgg|p.Arg291Trp/c.871A>T",9042,284,9429,0.0301198430374377,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",22.53,14.74,9042,284,9429,0.0301198430374377,0,0,0,"NA","low bq","NA"]
["UPN_Te4_012",5,170837562,"C","G","NPM1","ENST00000517671","missense_variant","tCt/tGt|p.Ser293Cys/c.878C>G",4509,181,4833,0.037450858679909,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",18.69,14,4509,181,4833,0.037450858679909,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",7,50444462,"T","A","IKZF1","ENST00000331340","missense_variant","gTg/gAg|p.Val131Glu/c.392T>A",8293,97,8424,0.0115147198480532,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.2,19.21,8293,97,8424,0.0115147198480532,0,0,0,"NA","low bq","NA"]
["UPN_Te4_017",7,50459490,"G","T","IKZF1","ENST00000331340","missense_variant","aGa/aTa|p.Arg260Ile/c.779G>T",13166,1390,14631,0.0950037591415488,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.24,15.21,7596,6,7612,0.000788229111928534,5570,1384,7019,0.197179085339792,"low bq","NA"]
["UPN_Te4_016",7,50467715,"A","C","IKZF1","ENST00000331340","missense_variant","aAc/aCc|p.Asn317Thr/c.950A>C",4349,64,4427,0.014456742715157,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.08,14.39,2256,16,2280,0.00701754385964912,2093,48,2147,0.0223567768979972,"low bq","NA"]
["UPN_Te4_006",7,50467894,"T","C","IKZF1","ENST00000331340","missense_variant","Tcc/Ccc|p.Ser377Pro/c.1129T>C",5403,109,5628,0.0193674484719261,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.18,15.13,2804,3,2822,0.00106307583274274,2599,106,2806,0.037776193870278,"low bq","NA"]
["UPN_Te4_006",7,50468278,"T","A","IKZF1","ENST00000331340","missense_variant","Ttc/Atc|p.Phe505Ile/c.1513T>A",6472,96,6595,0.0145564821834723,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.12,15.93,6472,96,6595,0.0145564821834723,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",7,50468284,"T","A","IKZF1","ENST00000331340","missense_variant","Tcg/Acg|p.Ser507Thr/c.1519T>A",6504,82,6610,0.0124054462934947,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.49,16.23,6504,82,6610,0.0124054462934947,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",7,101740774,"A","T","CUX1","ENST00000292535","missense_variant","aaA/aaT|p.Lys133Asn/c.399A>T",1921,22,1952,0.0112704918032787,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.38,15.59,0,0,0,"NA",1921,22,1952,0.0112704918032787,"low bq","NA"]
["UPN_Te4_002",7,101747633,"C","A","CUX1","ENST00000292535","missense_variant","Ctt/Att|p.Leu142Ile/c.424C>A",5846,259,6123,0.0422995263759595,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.87,14.16,5846,259,6123,0.0422995263759595,0,0,0,"NA","low bq","NA"]
["UPN_Te4_002",7,101747651,"G","T","CUX1","ENST00000292535","stop_gained","Gaa/Taa|p.Glu148*/c.442G>T",11939,231,12209,0.0189204685068392,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.36,14.31,5867,198,6099,0.0324643384161338,6072,33,6110,0.00540098199672668,"low bq","NA"]
["UPN_Te4_002",7,101747666,"C","A","CUX1","ENST00000292535","missense_variant","Ctg/Atg|p.Leu153Met/c.457C>A",11843,375,12250,0.0306122448979592,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.1,14.33,5709,358,6080,0.0588815789473684,6134,17,6170,0.00275526742301459,"low bq","NA"]
["UPN_Te4_014",7,101747675,"C","A","CUX1","ENST00000292535","missense_variant","Caa/Aaa|p.Gln156Lys/c.466C>A",9472,154,9663,0.0159370795819104,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.86,14.42,4660,137,4804,0.0285179017485429,4812,17,4859,0.00349866227618852,"low bq","NA"]
["UPN_Te4_009",7,101747693,"C","A","CUX1","ENST00000292535","missense_variant","Ctt/Att|p.Leu162Ile/c.484C>A",2961,196,3173,0.0617711944531989,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.67,14.22,1367,187,1564,0.119565217391304,1594,9,1609,0.00559353635798633,"low bq","NA"]
["UPN_Te4_015",7,101747708,"A","T","CUX1","ENST00000292535","stop_gained","Aag/Tag|p.Lys167*/c.499A>T",1528,20,1552,0.0128865979381443,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.3,17.95,762,1,765,0.00130718954248366,766,19,787,0.0241423125794155,"low bq","NA"]
["UPN_Te4_020",7,101747722,"C","A","CUX1","ENST00000292535","missense_variant","gaC/gaA|p.Asp171Glu/c.513C>A",3868,119,4000,0.02975,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.8,14.33,667,114,783,0.145593869731801,3201,5,3217,0.00155424308361828,"low bq","NA"]
["UPN_Te4_011",7,101840157,"T","A","CUX1","ENST00000292535","missense_variant","aTg/aAg|p.Met489Lys/c.1466T>A",19656,266,20011,0.0132926890210384,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.22,17.67,19654,266,20009,0.0132940176920386,2,0,2,0,"low bq","NA"]
["UPN_Te4_015",7,101840381,"C","G","CUX1","ENST00000292535","missense_variant","Ctg/Gtg|p.Leu564Val/c.1690C>G",13625,203,13991,0.0145093274247731,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.15,14.67,7123,1,7157,0.000139723347771413,6502,202,6834,0.0295580918934738,"low bq","NA"]
["UPN_Te4_006",7,101840421,"A","T","CUX1","ENST00000292535","missense_variant","tAt/tTt|p.Tyr577Phe/c.1730A>T",11802,146,11997,0.0121697090939402,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.98,16.64,0,0,0,"NA",11802,146,11997,0.0121697090939402,"low bq","NA"]
["UPN_Te4_020",7,101843452,"G","T","CUX1","ENST00000292535","missense_variant","Gca/Tca|p.Ala688Ser/c.2062G>T",11847,241,12119,0.0198861292185824,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.41,14.88,6144,5,6169,0.000810504133571081,5703,236,5950,0.0396638655462185,"low bq","NA"]
["UPN_Te4_019",7,101844751,"A","C","CUX1","ENST00000292535","missense_variant","gAc/gCc|p.Asp725Ala/c.2174A>C",10779,118,10932,0.0107939992682034,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.03,14.38,5388,106,5506,0.0192517253904831,5391,12,5426,0.00221157390342794,"low bq","NA"]
["UPN_Te4_014",7,101845162,"A","T","CUX1","ENST00000292535","missense_variant","cAg/cTg|p.Gln862Leu/c.2585A>T",13941,143,14128,0.0101217440543601,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.79,16.47,0,0,0,"NA",13941,143,14128,0.0101217440543601,"low bq","NA"]
["UPN_Te4_002",7,101845290,"A","C","CUX1","ENST00000292535","missense_variant","Aca/Cca|p.Thr905Pro/c.2713A>C",1206,21,1230,0.0170731707317073,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.69,14.33,1206,21,1230,0.0170731707317073,0,0,0,"NA","low bq","NA"]
["UPN_Te4_008",7,101845317,"T","A","CUX1","ENST00000292535","missense_variant","Tcc/Acc|p.Ser914Thr/c.2740T>A",1968,111,2205,0.0503401360544218,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.46,14.88,1968,111,2205,0.0503401360544218,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",7,101845318,"C","G","CUX1","ENST00000292535","missense_variant","tCc/tGc|p.Ser914Cys/c.2741C>G",1415,23,1473,0.0156143923964698,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.49,14,1413,23,1471,0.0156356220258328,2,0,2,0,"low bq","NA"]
["UPN_Te4_015",7,101845327,"T","G","CUX1","ENST00000292535","missense_variant","gTg/gGg|p.Val917Gly/c.2750T>G",713,63,798,0.0789473684210526,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.47,14,713,63,798,0.0789473684210526,0,0,0,"NA","low bq","NA"]
["UPN_Te4_008",7,101845333,"T","G","CUX1","ENST00000292535","missense_variant","aTg/aGg|p.Met919Arg/c.2756T>G",1939,71,2175,0.0326436781609195,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.58,14.56,1939,71,2175,0.0326436781609195,0,0,0,"NA","low bq","NA"]
["UPN_Te4_010",7,101845339,"A","C","CUX1","ENST00000292535","missense_variant","aAg/aCg|p.Lys921Thr/c.2762A>C",2136,36,2181,0.0165061898211829,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.53,14.5,1018,33,1054,0.0313092979127135,1118,3,1127,0.00266193433895297,"low bq","NA"]
["UPN_Te4_008",7,101845349,"G","C","CUX1","ENST00000292535","missense_variant","aaG/aaC|p.Lys924Asn/c.2772G>C",4361,60,4439,0.0135165577832845,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.13,14,2060,57,2130,0.0267605633802817,2301,3,2309,0.00129926375054136,"low bq","NA"]
["UPN_Te4_007",7,101845357,"T","G","CUX1","ENST00000292535","missense_variant","gTc/gGc|p.Val927Gly/c.2780T>G",1924,284,2234,0.127126230975828,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.48,14.89,762,277,1057,0.262062440870388,1162,7,1177,0.00594732370433305,"low bq","NA"]
["UPN_Te4_022",7,101845366,"T","G","CUX1","ENST00000292535","missense_variant","cTg/cGg|p.Leu930Arg/c.2789T>G",878,166,1078,0.153988868274583,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.59,14.12,263,166,457,0.363238512035011,615,0,621,0,"low bq","NA"]
["UPN_Te4_010",7,101847798,"A","C","CUX1","ENST00000292535","missense_variant","cAg/cCg|p.Gln1012Pro/c.3035A>C",10491,211,10797,0.0195424654996758,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.11,15.79,5200,209,5435,0.0384544618215271,5291,2,5362,0.000372995151063036,"low bq","NA"]
["UPN_Te4_013",7,101870908,"T","A","CUX1","ENST00000292535","missense_variant","aTa/aAa|p.Ile1131Lys/c.3392T>A",2662,31,2703,0.0114687384387717,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.02,18.55,2662,31,2703,0.0114687384387717,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",7,101882843,"T","A","CUX1","ENST00000292535","missense_variant","aTc/aAc|p.Ile1289Asn/c.3866T>A",16492,190,16756,0.0113392217713058,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.6,18.17,16492,190,16756,0.0113392217713058,0,0,0,"NA","low bq","NA"]
["UPN_Te4_004",7,101882860,"T","A","CUX1","ENST00000292535","missense_variant","Tac/Aac|p.Tyr1295Asn/c.3883T>A",13015,253,13299,0.0190239867659222,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.66,16.36,13015,253,13299,0.0190239867659222,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",7,101891748,"A","T","CUX1","ENST00000292535","missense_variant","cAg/cTg|p.Gln1315Leu/c.3944A>T",3531,207,3768,0.0549363057324841,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.74,15.71,1898,3,1912,0.00156903765690377,1633,204,1856,0.109913793103448,"low bq","NA"]
["UPN_Te4_010",7,101891952,"C","A","CUX1","ENST00000292535","missense_variant","cCg/cAg|p.Pro1383Gln/c.4148C>A",2924,47,2977,0.0157877057440376,0,0,0,1,1,0,0,1,3,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",35.11,27.77,1450,23,1476,0.0155826558265583,1474,24,1501,0.0159893404397069,"low bq","NA"]
["UPN_Te4_021",7,101891970,"A","C","CUX1","ENST00000292535","missense_variant","gAc/gCc|p.Asp1389Ala/c.4166A>C",2544,43,2593,0.0165831083686849,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.77,14,1246,42,1291,0.0325329202168861,1298,1,1302,0.000768049155145929,"low bq","NA"]
["UPN_Te4_005",7,101891994,"A","C","CUX1","ENST00000292535","missense_variant","gAa/gCa|p.Glu1397Ala/c.4190A>C",2218,42,2266,0.0185348631950574,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.12,14,1043,42,1089,0.0385674931129477,1175,0,1177,0,"low bq","NA"]
["UPN_Te4_018",7,101892110,"A","C","CUX1","ENST00000292535","missense_variant","Agc/Cgc|p.Ser1436Arg/c.4306A>C",897,264,1164,0.22680412371134,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.02,15.06,312,264,577,0.457538994800693,585,0,587,0,"low bq","NA"]
["UPN_Te4_016",7,140453122,"T","A","BRAF","ENST00000288602","missense_variant","Agt/Tgt|p.Ser605Cys/c.1813A>T",29352,571,30005,0.0190301616397267,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.28,16.09,15121,79,15242,0.00518304684424616,14231,492,14763,0.0333265596423491,"low bq","NA"]
["UPN_Te4_011",7,148504753,"T","A","EZH2","ENST00000320356","missense_variant","gaA/gaT|p.Glu747Asp/c.2241A>T",15068,227,15339,0.0147988786752722,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.16,16.31,15068,227,15339,0.0147988786752722,0,0,0,"NA","low bq","NA"]
["UPN_Te4_009",7,148504759,"T","A","EZH2","ENST00000320356","missense_variant","gaA/gaT|p.Glu745Asp/c.2235A>T",4123,89,4222,0.0210800568450971,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.25,15.26,4123,89,4222,0.0210800568450971,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",7,148504775,"T","A","EZH2","ENST00000320356","missense_variant","aAg/aTg|p.Lys740Met/c.2219A>T",5508,159,5689,0.0279486728774829,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.62,15.98,5508,159,5689,0.0279486728774829,0,0,0,"NA","low bq","NA"]
["UPN_Te4_006",7,148504790,"T","A","EZH2","ENST00000320356","missense_variant","cAg/cTg|p.Gln735Leu/c.2204A>T",9918,214,10160,0.0210629921259843,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.02,14.84,9917,214,10159,0.0210650654591987,1,0,1,0,"low bq","NA"]
["UPN_Te4_010",7,148504794,"T","A","EZH2","ENST00000320356","missense_variant","Agc/Tgc|p.Ser734Cys/c.2200A>T",11150,114,11307,0.0100822499336694,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.69,15.04,11094,114,11246,0.0101369375778054,56,0,61,0,"low bq","NA"]
["UPN_Te4_014",7,148504796,"T","A","EZH2","ENST00000320356","missense_variant","tAc/tTc|p.Tyr733Phe/c.2198A>T",7618,513,8148,0.062960235640648,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.07,14.39,7527,513,8057,0.0636713416904555,91,0,91,0,"low bq","NA"]
["UPN_Te4_006",7,148511191,"A","T","EZH2","ENST00000320356","missense_variant","Tgc/Agc|p.Cys571Ser/c.1711T>A",17318,186,17543,0.0106025195234566,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.28,19.08,1,0,1,0,17317,186,17542,0.0106031239311367,"low bq","NA"]
["UPN_Te4_004",7,148515040,"C","A","EZH2","ENST00000320356","missense_variant","gGg/gTg|p.Gly390Val/c.1169G>T",5163,53,5227,0.0101396594604936,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.31,15.74,5163,53,5227,0.0101396594604936,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",7,148515089,"T","G","EZH2","ENST00000320356","missense_variant","Acc/Ccc|p.Thr374Pro/c.1120A>C",15443,192,15724,0.012210633426609,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.08,17.74,7678,115,7833,0.0146814758074812,7765,77,7891,0.00975795209732607,"low bq","NA"]
["UPN_Te4_007",7,148525952,"C","A","EZH2","ENST00000320356","stop_gained","Gaa/Taa|p.Glu169*/c.505G>T",21230,3297,24559,0.134248137139134,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.83,14.94,8979,3278,12268,0.267199217476361,12251,19,12291,0.00154584655438939,"low bq","NA"]
["UPN_Te4_021",7,148529726,"C","A","EZH2","ENST00000320356","missense_variant","atG/atT|p.Met121Ile/c.363G>T",1710,24,1736,0.0138248847926267,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.93,14.83,1710,24,1736,0.0138248847926267,0,0,0,"NA","low bq","NA"]
["UPN_Te4_015",7,148543641,"A","T","EZH2","ENST00000320356","stop_gained","tTa/tAa|p.Leu56*/c.167T>A",5990,79,6098,0.0129550672351591,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.65,18.23,3221,9,3245,0.00277349768875193,2769,70,2853,0.0245355765860498,"low bq","NA"]
["UPN_Te4_001",7,148543657,"C","A","EZH2","ENST00000320356","stop_gained","Gaa/Taa|p.Glu51*/c.151G>T",1635,21,1662,0.0126353790613718,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.01,14.33,851,0,851,0,784,21,811,0.0258939580764488,"low bq","NA"]
["UPN_Te4_002",7,148543667,"C","A","EZH2","ENST00000320356","missense_variant","caG/caT|p.Gln47His/c.141G>T",5904,138,6098,0.0226303706133158,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.52,14.51,116,55,171,0.321637426900585,5788,83,5927,0.0140037118272313,"low bq","NA"]
["UPN_Te4_006",7,148543677,"G","T","EZH2","ENST00000320356","missense_variant","tCc/tAc|p.Ser44Tyr/c.131C>A",6080,260,6380,0.0407523510971787,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.8,14.27,0,0,0,"NA",6080,260,6380,0.0407523510971787,"low bq","NA"]
["UPN_Te4_006",7,148543682,"A","T","EZH2","ENST00000320356","missense_variant","ttT/ttA|p.Phe42Leu/c.126T>A",6273,117,6410,0.0182527301092044,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.69,16.34,0,0,0,"NA",6273,117,6410,0.0182527301092044,"low bq","NA"]
["UPN_Te4_011",7,148544353,"A","T","EZH2","ENST00000320356","missense_variant","gTt/gAt|p.Val13Asp/c.38T>A",6691,79,6800,0.0116176470588235,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.4,16.71,13,0,13,0,6678,79,6787,0.0116398998084573,"low bq","NA"]
["UPN_Te4_018",8,117864323,"A","T","RAD21","ENST00000297338","missense_variant","aTt/aAt|p.Ile445Asn/c.1334T>A",6779,72,6878,0.0104681593486479,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.24,20.42,0,0,0,"NA",6779,72,6878,0.0104681593486479,"low bq","NA"]
["UPN_Te4_022",8,117864813,"C","A","RAD21","ENST00000297338","missense_variant","caG/caT|p.Gln432His/c.1296G>T",4779,110,4897,0.0224627322850725,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.36,14.44,4721,110,4839,0.0227319694151684,58,0,58,0,"low bq","NA"]
["UPN_Te4_019",8,117864848,"C","A","RAD21","ENST00000297338","stop_gained","Gaa/Taa|p.Glu421*/c.1261G>T",1338,53,1392,0.0380747126436782,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.26,14.38,1330,53,1384,0.0382947976878613,8,0,8,0,"low bq","NA"]
["UPN_Te4_008",8,117864869,"C","A","RAD21","ENST00000297338","missense_variant","Gat/Tat|p.Asp414Tyr/c.1240G>T",7288,129,7446,0.0173247381144239,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.39,14.44,7288,129,7446,0.0173247381144239,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016",8,117864880,"G","T","RAD21","ENST00000297338","missense_variant","gCa/gAa|p.Ala410Glu/c.1229C>A",9960,464,10492,0.0442241707967976,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.37,14.57,6405,48,6476,0.00741198270537369,3555,416,4016,0.103585657370518,"low bq","NA"]
["UPN_Te4_006",8,117864884,"C","A","RAD21","ENST00000297338","stop_gained","Gag/Tag|p.Glu409*/c.1225G>T",14849,153,15078,0.0101472343812177,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.92,14.52,8188,39,8236,0.00473530840213696,6661,114,6842,0.016661794796843,"low bq","NA"]
["UPN_Te4_011",8,117864886,"C","A","RAD21","ENST00000297338","missense_variant","gGa/gTa|p.Gly408Val/c.1223G>T",17057,314,17457,0.0179870539038781,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.48,14.31,9802,87,9910,0.00877901109989909,7255,227,7547,0.0300781767589771,"low bq","NA"]
["UPN_Te4_006",8,117864891,"T","A","RAD21","ENST00000297338","missense_variant","aaA/aaT|p.Lys406Asn/c.1218A>T",14866,228,15187,0.0150128399288865,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.36,14.92,8044,92,8175,0.0112538226299694,6822,136,7012,0.0193953223046207,"low bq","NA"]
["UPN_Te4_021",8,117864894,"C","A","RAD21","ENST00000297338","missense_variant","agG/agT|p.Arg405Ser/c.1215G>T",3043,251,3337,0.0752172610128858,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",17.52,14.21,1326,191,1517,0.125906394199077,1717,60,1820,0.032967032967033,"low bq","NA"]
["UPN_Te4_015",8,117864898,"C","A","RAD21","ENST00000297338","missense_variant","aGg/aTg|p.Arg404Met/c.1211G>T",10336,183,10552,0.0173426838514026,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.13,14.18,5716,122,5846,0.0208689702360588,4620,61,4706,0.0129621759456014,"low bq","NA"]
["UPN_Te4_001",8,117864908,"G","A","RAD21","ENST00000297338","missense_variant","Ctt/Ttt|p.Leu401Phe/c.1201C>T",9695,204,13418,0.0152034580414369,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",18.87,14.33,5213,198,7319,0.0270528760759667,4482,6,6099,0.000983767830791933,"low bq","NA"]
["UPN_Te4_013",8,117864910,"T","G","RAD21","ENST00000297338","missense_variant","gAc/gCc|p.Asp400Ala/c.1199A>C",3893,162,4069,0.0398132219218481,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.42,14.19,11,0,11,0,3882,162,4058,0.0399211434204041,"low bq","NA"]
["UPN_Te4_003",8,117864914,"C","A","RAD21","ENST00000297338","stop_gained","Gaa/Taa|p.Glu399*/c.1195G>T",5188,198,5512,0.0359216255442671,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.71,14.14,1,0,1,0,5187,198,5511,0.0359281437125748,"low bq","NA"]
["UPN_Te4_004",8,117864917,"G","T","RAD21","ENST00000297338","missense_variant","Cca/Aca|p.Pro398Thr/c.1192C>A",6487,84,6582,0.0127620783956244,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.26,14.64,0,0,0,"NA",6487,84,6582,0.0127620783956244,"low bq","NA"]
["UPN_Te4_012",8,117864920,"C","A","RAD21","ENST00000297338","missense_variant","Gta/Tta|p.Val397Leu/c.1189G>T",2233,220,2458,0.0895036615134256,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.42,14.15,0,0,0,"NA",2233,220,2458,0.0895036615134256,"low bq","NA"]
["UPN_Te4_022",8,117864923,"G","C","RAD21","ENST00000297338","missense_variant","Ctt/Gtt|p.Leu396Val/c.1186C>G",2799,635,3903,0.162695362541635,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",16.01,14,0,0,0,"NA",2799,635,3903,0.162695362541635,"low bq","NA"]
["UPN_Te4_008",8,117864928,"G","T","RAD21","ENST00000297338","missense_variant","aCa/aAa|p.Thr394Lys/c.1181C>A",5966,398,6368,0.0625,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.96,14.18,0,0,0,"NA",5966,398,6368,0.0625,"low bq","NA"]
["UPN_Te4_003",8,117864933,"A","T","RAD21","ENST00000297338","stop_gained","tgT/tgA|p.Cys392*/c.1176T>A",5253,214,5540,0.0386281588447653,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.03,14.85,0,0,0,"NA",5253,214,5540,0.0386281588447653,"low bq","NA"]
["UPN_Te4_010",8,117864934,"C","A","RAD21","ENST00000297338","missense_variant","tGt/tTt|p.Cys392Phe/c.1175G>T",8428,456,8903,0.0512186903291025,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.4,14.3,0,0,0,"NA",8428,456,8903,0.0512186903291025,"low bq","NA"]
["UPN_Te4_008",8,117864942,"A","T","RAD21","ENST00000297338","missense_variant","ttT/ttA|p.Phe389Leu/c.1167T>A",6162,218,6407,0.0340252848447011,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.61,17.51,0,0,0,"NA",6162,218,6407,0.0340252848447011,"low bq","NA"]
["UPN_Te4_011",8,117866494,"C","A","RAD21","ENST00000297338","missense_variant","aGa/aTa|p.Arg384Ile/c.1151G>T",34473,865,35511,0.0243586494325702,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.97,14.45,16598,780,17504,0.0445612431444241,17875,85,18007,0.00472038651635475,"low bq","NA"]
["UPN_Te4_022",8,117866502,"C","A","RAD21","ENST00000297338","missense_variant","tgG/tgT|p.Trp381Cys/c.1143G>T",14895,188,15123,0.0124313958870594,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.27,14.49,7261,177,7458,0.0237329042638777,7634,11,7665,0.00143509458577952,"low bq","NA"]
["UPN_Te4_016",8,117866527,"A","T","RAD21","ENST00000297338","missense_variant","tTt/tAt|p.Phe373Tyr/c.1118T>A",11003,122,11191,0.0109016173711018,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.92,15.42,0,0,0,"NA",11003,122,11191,0.0109016173711018,"low bq","NA"]
["UPN_Te4_014",8,117866652,"C","A","RAD21","ENST00000297338","missense_variant","gaG/gaT|p.Glu331Asp/c.993G>T",40142,536,40765,0.0131485342818594,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.32,15.25,20164,67,20262,0.00330668245977692,19978,469,20503,0.0228747012632298,"low bq","NA"]
["UPN_Te4_019",8,117868414,"C","A","RAD21","ENST00000297338","missense_variant","Gat/Tat|p.Asp310Tyr/c.928G>T",1308,138,1448,0.0953038674033149,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.79,14.55,1308,138,1448,0.0953038674033149,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",8,117868438,"C","A","RAD21","ENST00000297338","stop_gained","Gaa/Taa|p.Glu302*/c.904G>T",13135,179,13331,0.0134273497862126,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.69,15.06,13135,179,13331,0.0134273497862126,0,0,0,"NA","low bq","NA"]
["UPN_Te4_014",8,117868441,"C","A","RAD21","ENST00000297338","stop_gained","Gaa/Taa|p.Glu301*/c.901G>T",12991,319,13321,0.0239471511147812,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.64,14.14,12991,319,13321,0.0239471511147812,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016",8,117868450,"G","T","RAD21","ENST00000297338","missense_variant","Cca/Aca|p.Pro298Thr/c.892C>A",8774,155,8954,0.0173106991288809,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.8,14.3,8557,145,8725,0.0166189111747851,217,10,229,0.0436681222707424,"low bq","NA"]
["UPN_Te4_022",8,117868456,"G","T","RAD21","ENST00000297338","missense_variant","Ctt/Att|p.Leu296Ile/c.886C>A",3700,97,3833,0.0253065483955127,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",16.26,14.82,3475,24,3504,0.00684931506849315,225,73,329,0.221884498480243,"low bq","NA"]
["UPN_Te4_016",8,117868463,"T","A","RAD21","ENST00000297338","missense_variant","caA/caT|p.Gln293His/c.879A>T",9341,105,9494,0.0110596165999579,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.87,17.07,8524,105,8669,0.0121121236590149,817,0,825,0,"low bq","NA"]
["UPN_Te4_011",8,117868465,"G","T","RAD21","ENST00000297338","missense_variant","Caa/Aaa|p.Gln293Lys/c.877C>A",12961,509,13537,0.037600650070178,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",18.98,14.17,12050,150,12256,0.0122389033942559,911,359,1281,0.280249804839969,"low bq","NA"]
["UPN_Te4_005",8,117868470,"G","C","RAD21","ENST00000297338","missense_variant","aCt/aGt|p.Thr291Ser/c.872C>G",11924,212,12524,0.0169274992015331,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.94,14.33,11025,16,11110,0.00144014401440144,899,196,1414,0.138613861386139,"low bq","NA"]
["UPN_Te4_007",8,117868476,"G","T","RAD21","ENST00000297338","missense_variant","aCc/aAc|p.Thr289Asn/c.866C>A",12863,147,13092,0.0112282309807516,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",17.96,14,10913,123,11114,0.0110671225481375,1950,24,1978,0.0121334681496461,"low bq","NA"]
["UPN_Te4_008",8,117868480,"G","T","RAD21","ENST00000297338","missense_variant","Cca/Aca|p.Pro288Thr/c.862C>A",6517,92,6631,0.0138742271150656,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",18.93,14.08,5326,87,5432,0.0160162002945508,1191,5,1199,0.00417014178482068,"low bq","NA"]
["UPN_Te4_018",8,117868483,"T","A","RAD21","ENST00000297338","missense_variant","Atg/Ttg|p.Met287Leu/c.859A>T",13410,158,13613,0.0116065525600529,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.76,15.13,11688,107,11837,0.00903945256399426,1722,51,1776,0.0287162162162162,"low bq","NA"]
["UPN_Te4_018",8,117868492,"C","A","RAD21","ENST00000297338","missense_variant","Gtt/Ttt|p.Val284Phe/c.850G>T",13179,370,13572,0.0272620100206307,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.36,14.28,11420,322,11760,0.0273809523809524,1759,48,1812,0.0264900662251656,"low bq","NA"]
["UPN_Te4_003",8,117868496,"A","C","RAD21","ENST00000297338","missense_variant","gaT/gaG|p.Asp282Glu/c.846T>G",8764,380,9891,0.0384187645334142,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.22,14,8120,0,8134,0,644,380,1757,0.216277746158224,"low bq","NA"]
["UPN_Te4_002",8,117868498,"C","A","RAD21","ENST00000297338","missense_variant","Gat/Tat|p.Asp282Tyr/c.844G>T",12014,406,12439,0.0326392796848621,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.56,14.56,9754,389,10157,0.0382987102490893,2260,17,2282,0.00744960560911481,"low bq","NA"]
["UPN_Te4_005",8,117868500,"A","C","RAD21","ENST00000297338","missense_variant","gTg/gGg|p.Val281Gly/c.842T>G",12807,298,13143,0.0226736665905805,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.32,14.36,10995,1,11028,9.06782734856728E-005,1812,297,2115,0.140425531914894,"low bq","NA"]
["UPN_Te4_021",8,117868503,"G","T","RAD21","ENST00000297338","stop_gained","tCa/tAa|p.Ser280*/c.839C>A",1636,92,1765,0.0521246458923513,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",14.37,14,1494,22,1528,0.0143979057591623,142,70,237,0.29535864978903,"low bq","bad alignment"]
["UPN_Te4_008",8,117868509,"G","C","RAD21","ENST00000297338","missense_variant","cCt/cGt|p.Pro278Arg/c.833C>G",5785,425,6636,0.0640446051838457,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",17.34,14.03,5229,2,5391,0.000370988684845112,556,423,1245,0.339759036144578,"low bq","NA"]
["UPN_Te4_012",8,117868510,"G","T","RAD21","ENST00000297338","missense_variant","Cct/Act|p.Pro278Thr/c.832C>A",2084,78,2205,0.0353741496598639,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",14.48,14.17,1863,65,1941,0.0334878928387429,221,13,264,0.0492424242424242,"low bq","bad alignment"]
["UPN_Te4_018",8,117868512,"C","A","RAD21","ENST00000297338","missense_variant","aGt/aTt|p.Ser277Ile/c.830G>T",12611,730,13361,0.0546366289948357,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.95,14.21,10838,575,11427,0.0503194189201015,1773,155,1934,0.0801447776628749,"low bq","NA"]
["UPN_Te4_008",8,117868515,"T","A","RAD21","ENST00000297338","missense_variant","gAt/gTt|p.Asp276Val/c.827A>T",6494,210,6719,0.0312546509897306,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.53,15.22,5304,58,5370,0.0108007448789572,1190,152,1349,0.112676056338028,"low bq","NA"]
["UPN_Te4_018",8,117868518,"G","C","RAD21","ENST00000297338","missense_variant","cCt/cGt|p.Pro275Arg/c.824C>G",12247,645,13378,0.0482134848258335,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",16.35,14,10796,15,11168,0.00134312320916905,1451,630,2210,0.285067873303167,"low bq","NA"]
["UPN_Te4_018",8,117868522,"C","A","RAD21","ENST00000297338","missense_variant","Ggg/Tgg|p.Gly274Trp/c.820G>T",12569,675,13262,0.0508973005579852,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",18.78,14.15,9867,665,10548,0.0630451270383011,2702,10,2714,0.00368459837877671,"low bq","NA"]
["UPN_Te4_004",8,117878865,"C","A","RAD21","ENST00000297338","missense_variant","tGt/tTt|p.Cys35Phe/c.104G>T",24679,259,24952,0.010379929464572,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.03,14.81,12615,36,12657,0.00284427589476179,12064,223,12295,0.018137454249695,"low bq","NA"]
["UPN_Te4_022",9,5070023,"C","A","JAK2","ENST00000381652","missense_variant","Cac/Aac|p.His538Asn/c.1612C>A",8256,268,8539,0.0313854081274154,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.96,15.32,3275,265,3544,0.0747742663656885,4981,3,4995,0.000600600600600601,"low bq","NA"]
["UPN_Te4_016",9,5073727,"C","A","JAK2","ENST00000381652","missense_variant","agC/agA|p.Ser602Arg/c.1806C>A",10511,108,10647,0.0101437024513948,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.48,14.23,10511,108,10647,0.0101437024513948,0,0,0,"NA","low bq","NA"]
["UPN_Te4_020",9,21971021,"G","C","CDKN2A","ENST00000498124","missense_variant","Ctg/Gtg|p.Leu113Val/c.337C>G",9843,154,10011,0.0153830786135251,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.09,14.21,4812,154,4972,0.0309734513274336,5031,0,5039,0,"low bq","NA"]
["UPN_Te4_007",9,21971204,"T","A","CDKN2A","ENST00000498124","missense_variant","Atg/Ttg|p.Met52Leu/c.154A>T",5318,63,5405,0.0116558741905643,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.95,19.24,2618,53,2682,0.0197613721103654,2700,10,2723,0.00367242012486228,"low bq","NA"]
["UPN_Te4_016",9,21974774,"G","C","CDKN2A","ENST00000498124","missense_variant","aCg/aGg|p.Thr18Arg/c.53C>G",2921,56,2984,0.0187667560321716,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.72,15.11,2920,56,2983,0.0187730472678512,1,0,1,0,"low bq","NA"]
["UPN_Te4_019",9,21974793,"A","C","CDKN2A","ENST00000498124","missense_variant","Tcg/Gcg|p.Ser12Ala/c.34T>G",1898,27,1932,0.0139751552795031,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.76,14,950,7,960,0.00729166666666667,948,20,972,0.0205761316872428,"low bq","NA"]
["UPN_Te4_001",9,133738220,"A","C","ABL1","ENST00000372348","missense_variant","gAc/gCc|p.Asp226Ala/c.677A>C",22524,297,23184,0.0128105590062112,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.91,14.84,11707,80,11841,0.00675618613292796,10817,217,11343,0.0191307414264304,"low bq","NA"]
["UPN_Te4_016",9,133738300,"A","T","ABL1","ENST00000372348","stop_gained","Aag/Tag|p.Lys253*/c.757A>T",11146,135,11356,0.0118879887284255,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.3,17.36,0,0,0,"NA",11146,135,11356,0.0118879887284255,"low bq","NA"]
["UPN_Te4_021",9,133738414,"A","C","ABL1","ENST00000372348","missense_variant","Acc/Ccc|p.Thr291Pro/c.871A>C",3047,33,3091,0.0106761565836299,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.06,15.27,3047,33,3091,0.0106761565836299,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",9,133748313,"A","T","ABL1","ENST00000372348","missense_variant","gAc/gTc|p.Asp344Val/c.1031A>T",14105,220,14383,0.0152958353611903,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.23,17.65,7280,25,7326,0.00341250341250341,6825,195,7057,0.0276321383023948,"low bq","NA"]
["UPN_Te4_016",9,139390563,"A","T","NOTCH1","ENST00000277541","missense_variant","aTg/aAg|p.Met2543Lys/c.7628T>A",5066,397,5491,0.0723001274813331,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.84,15.64,3133,8,3166,0.00252684775742262,1933,389,2325,0.167311827956989,"low bq","NA"]
["UPN_Te4_009",9,139390570,"T","G","NOTCH1","ENST00000277541","missense_variant","Acc/Ccc|p.Thr2541Pro/c.7621A>C",1432,162,1600,0.10125,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.8,14.42,883,0,886,0,549,162,714,0.226890756302521,"low bq","NA"]
["UPN_Te4_016",9,139390582,"A","T","NOTCH1","ENST00000277541","missense_variant","Tcc/Acc|p.Ser2537Thr/c.7609T>A",5615,232,5888,0.0394021739130435,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.48,15.13,3138,4,3164,0.00126422250316056,2477,228,2724,0.0837004405286344,"low bq","NA"]
["UPN_Te4_011",9,139390584,"A","C","NOTCH1","ENST00000277541","missense_variant","gTc/gGc|p.Val2536Gly/c.7607T>G",8319,120,8518,0.0140878140408547,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.63,14.61,4433,73,4533,0.0161041253033311,3886,47,3985,0.0117942283563363,"low bq","NA"]
["UPN_Te4_010",9,139390591,"C","G","NOTCH1","ENST00000277541","missense_variant","Gag/Cag|p.Glu2534Gln/c.7600G>C",2069,94,2171,0.0432980193459235,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.09,14.66,1131,2,1137,0.00175901495162709,938,92,1034,0.0889748549323017,"low bq","NA"]
["UPN_Te4_001",9,139390599,"T","G","NOTCH1","ENST00000277541","missense_variant","gAc/gCc|p.Asp2531Ala/c.7592A>C",6666,132,6848,0.0192757009345794,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.56,15.1,3605,8,3641,0.00219719857182093,3061,124,3207,0.0386654193950733,"low bq","NA"]
["UPN_Te4_010",9,139390603,"A","T","NOTCH1","ENST00000277541","missense_variant","Tcc/Acc|p.Ser2530Thr/c.7588T>A",1995,163,2171,0.0750806080147398,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.62,14.48,1136,0,1137,0,859,163,1034,0.157640232108317,"low bq","NA"]
["UPN_Te4_008",9,139390613,"A","T","NOTCH1","ENST00000277541","missense_variant","caT/caA|p.His2526Gln/c.7578T>A",4603,366,5017,0.072951963324696,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.68,14.58,2604,3,2632,0.00113981762917933,1999,363,2385,0.152201257861635,"low bq","NA"]
["UPN_Te4_019",9,139390620,"G","T","NOTCH1","ENST00000277541","missense_variant","tCc/tAc|p.Ser2524Tyr/c.7571C>A",2983,49,3035,0.0161449752883031,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.25,14.29,1571,0,1572,0,1412,49,1463,0.0334928229665072,"low bq","NA"]
["UPN_Te4_018",9,139390623,"G","T","NOTCH1","ENST00000277541","stop_gained","tCg/tAg|p.Ser2523*/c.7568C>A",8312,164,8494,0.0193077466446904,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.82,14.11,4414,5,4429,0.00112892300745089,3898,159,4065,0.0391143911439114,"low bq","NA"]
["UPN_Te4_013",9,139390632,"C","A","NOTCH1","ENST00000277541","missense_variant","tGg/tTg|p.Trp2520Leu/c.7559G>T",1621,26,1649,0.015767131594906,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.01,14.27,846,0,847,0,775,26,802,0.0324189526184539,"low bq","NA"]
["UPN_Te4_017",9,139390634,"C","G","NOTCH1","ENST00000277541","missense_variant","caG/caC|p.Gln2519His/c.7557G>C",3001,100,3117,0.0320821302534488,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.74,14.13,1597,0,1598,0,1404,100,1519,0.0658327847267939,"low bq","NA"]
["UPN_Te4_007",9,139390654,"A","T","NOTCH1","ENST00000277541","missense_variant","Tcc/Acc|p.Ser2513Thr/c.7537T>A",1916,25,1961,0.012748597654258,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.38,15.44,0,0,0,"NA",1916,25,1961,0.012748597654258,"low bq","NA"]
["UPN_Te4_010",9,139390664,"G","T","NOTCH1","ENST00000277541","missense_variant","ttC/ttA|p.Phe2509Leu/c.7527C>A",6645,69,6722,0.0102648021422196,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.53,14.36,5604,2,5614,0.000356252226576416,1041,67,1108,0.0604693140794224,"low bq","NA"]
["UPN_Te4_015",9,139390666,"A","T","NOTCH1","ENST00000277541","missense_variant","Ttc/Atc|p.Phe2509Ile/c.7525T>A",6489,399,6985,0.0571224051539012,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.24,15.2,3861,3,3879,0.000773395204949729,2628,396,3106,0.127495170637476,"low bq","NA"]
["UPN_Te4_014",9,139390788,"A","C","NOTCH1","ENST00000277541","missense_variant","cTg/cGg|p.Leu2468Arg/c.7403T>G",11952,365,12507,0.0291836571519949,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.11,14.5,6116,45,6222,0.00723240115718419,5836,320,6285,0.050914876690533,"low bq","NA"]
["UPN_Te4_002",9,139390800,"A","C","NOTCH1","ENST00000277541","missense_variant","cTg/cGg|p.Leu2464Arg/c.7391T>G",9801,189,10121,0.0186740440667918,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.26,14.28,4988,14,5029,0.00278385364883675,4813,175,5092,0.0343676355066771,"low bq","NA"]
["UPN_Te4_004",9,139390828,"T","G","NOTCH1","ENST00000277541","missense_variant","Act/Cct|p.Thr2455Pro/c.7363A>C",4531,48,4611,0.0104098893949252,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.38,14.38,0,0,0,"NA",4531,48,4611,0.0104098893949252,"low bq","NA"]
["UPN_Te4_013",9,139391139,"T","A","NOTCH1","ENST00000277541","missense_variant","cAc/cTc|p.His2351Leu/c.7052A>T",2903,32,2946,0.0108621860149355,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.61,22.12,2903,32,2946,0.0108621860149355,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013",9,139391343,"C","G","NOTCH1","ENST00000277541","missense_variant","aGc/aCc|p.Ser2283Thr/c.6848G>C",4713,383,5117,0.0748485440687903,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.3,14.5,2608,0,2614,0,2105,383,2503,0.153016380343588,"low bq","NA"]
["UPN_Te4_015",9,139391958,"T","A","NOTCH1","ENST00000277541","missense_variant","aAg/aTg|p.Lys2078Met/c.6233A>T",4421,51,4506,0.0113182423435419,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.09,18.57,4312,51,4397,0.0115988173754833,109,0,109,0,"low bq","NA"]
["UPN_Te4_021",9,139391992,"G","C","NOTCH1","ENST00000277541","missense_variant","Ctg/Gtg|p.Leu2067Val/c.6199C>G",2304,60,2381,0.0251994960100798,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.76,14.53,2236,59,2307,0.0255743389683572,68,1,74,0.0135135135135135,"low bq","NA"]
["UPN_Te4_002",9,139392004,"T","C","NOTCH1","ENST00000277541","missense_variant","Aca/Gca|p.Thr2063Ala/c.6187A>G",120,23,166,0.13855421686747,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",15.34,14.96,0,0,0,"NA",120,23,166,0.13855421686747,"low bq","NA"]
["UPN_Te4_009",9,139397768,"A","T","NOTCH1","ENST00000277541","missense_variant","cTg/cAg|p.Leu1678Gln/c.5033T>A",1847,22,1872,0.0117521367521368,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.62,25.32,0,0,0,"NA",1847,22,1872,0.0117521367521368,"low bq","NA"]
["UPN_Te4_008",9,139399231,"A","C","NOTCH1","ENST00000277541","missense_variant","Tgg/Ggg|p.Trp1638Gly/c.4912T>G",8287,108,8422,0.0128235573497981,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.91,15.05,4111,101,4226,0.0238996687174633,4176,7,4196,0.00166825548141087,"low bq","NA"]
["UPN_Te4_018",10,112342327,"C","A","SMC3","ENST00000361804","missense_variant","gCt/gAt|p.Ala244Asp/c.731C>A",18959,202,19245,0.0104962327877371,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.5,14.93,9445,181,9670,0.018717683557394,9514,21,9575,0.00219321148825065,"low bq","NA"]
["UPN_Te4_004",11,534300,"A","C","HRAS","ENST00000417302","missense_variant","gTg/gGg|p.Val8Gly/c.23T>G",1401,24,1432,0.0167597765363128,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",18.82,14,1400,24,1431,0.0167714884696017,1,0,1,0,"low bq","NA"]
["UPN_Te4_012",11,32413571,"A","C","WT1","ENST00000332351","missense_variant","tTc/tGc|p.Phe460Cys/c.1379T>G",1948,38,1994,0.0190571715145436,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.66,15,1948,38,1994,0.0190571715145436,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",11,32413575,"T","G","WT1","ENST00000332351","missense_variant","Aag/Cag|p.Lys459Gln/c.1375A>C",8017,86,8175,0.010519877675841,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.43,15.07,8017,86,8175,0.010519877675841,0,0,0,"NA","low bq","NA"]
["UPN_Te4_010",11,32413607,"A","T","WT1","ENST00000332351","missense_variant","gTg/gAg|p.Val448Glu/c.1343T>A",18146,223,18542,0.0120267500808974,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.9,16.35,9148,104,9383,0.0110838750932538,8998,119,9159,0.012992684790916,"low bq","NA"]
["UPN_Te4_001",11,118307385,"C","G","KMT2A","ENST00000389506","missense_variant","gCg/gGg|p.Ala53Gly/c.158C>G",3158,87,3257,0.026711697881486,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.65,14.77,3158,87,3257,0.026711697881486,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016",11,118307393,"T","G","KMT2A","ENST00000389506","missense_variant","Tcc/Gcc|p.Ser56Ala/c.166T>G",272,1123,2385,0.470859538784067,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",15.77,14.01,272,1123,2385,0.470859538784067,0,0,0,"NA","low bq","NA"]
["UPN_Te4_012",11,118307414,"G","C","KMT2A","ENST00000389506","missense_variant","Gcg/Ccg|p.Ala63Pro/c.187G>C",747,81,847,0.0956316410861865,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.64,14,747,81,847,0.0956316410861865,0,0,0,"NA","low bq","NA"]
["UPN_Te4_021",11,118307424,"C","G","KMT2A","ENST00000389506","missense_variant","gCg/gGg|p.Ala66Gly/c.197C>G",1946,99,2046,0.0483870967741935,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",16.86,14,1946,99,2046,0.0483870967741935,0,0,0,"NA","low bq","NA"]
["UPN_Te4_015",11,118307442,"C","G","KMT2A","ENST00000389506","missense_variant","gCt/gGt|p.Ala72Gly/c.215C>G",2967,190,3162,0.0600885515496521,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.69,14.18,735,180,915,0.19672131147541,2232,10,2247,0.00445037828215398,"low bq","NA"]
["UPN_Te4_015",11,118343203,"A","T","KMT2A","ENST00000389506","missense_variant","ttA/ttT|p.Leu443Phe/c.1329A>T",21719,281,22071,0.0127316388020479,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.29,17.31,11119,17,11163,0.00152288811251456,10600,264,10908,0.0242024202420242,"low bq","NA"]
["UPN_Te4_015",11,118374108,"C","A","KMT2A","ENST00000389506","missense_variant","Ccc/Acc|p.Pro2498Thr/c.7492C>A",28252,303,28641,0.0105792395516916,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.41,16.63,14212,213,14452,0.0147384445059507,14040,90,14189,0.00634294171541335,"low bq","NA"]
["UPN_Te4_018",11,119149375,"A","T","CBL","ENST00000264033","missense_variant","gaA/gaT|p.Glu461Asp/c.1383A>T",12540,132,12755,0.0103488827910623,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.6,16.57,1,0,8,0,12539,132,12747,0.0103553777359379,"low bq","NA"]
["UPN_Te4_011",12,11905487,"A","C","ETV6","ENST00000396373","missense_variant","gAc/gCc|p.Asp46Ala/c.137A>C",13549,148,13862,0.0106766700331842,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.45,14.18,6947,116,7092,0.0163564579808235,6602,32,6770,0.00472673559822747,"low bq","NA"]
["UPN_Te4_003",12,11905508,"A","T","ETV6","ENST00000396373","missense_variant","cAc/cTc|p.His53Leu/c.158A>T",4683,90,4793,0.01877738368454,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.44,15.74,0,0,0,"NA",4683,90,4793,0.01877738368454,"low bq","NA"]
["UPN_Te4_016",12,12022460,"A","C","ETV6","ENST00000396373","missense_variant","aAt/aCt|p.Asn189Thr/c.566A>C",14787,307,15198,0.0202000263192525,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.33,14.53,7625,35,7701,0.00454486430333723,7162,272,7497,0.036281179138322,"low bq","NA"]
["UPN_Te4_008",12,12022478,"A","C","ETV6","ENST00000396373","missense_variant","gAc/gCc|p.Asp195Ala/c.584A>C",21614,252,21982,0.0114639250295696,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.57,14.34,10855,168,11068,0.0151788941091435,10759,84,10914,0.00769653655854865,"low bq","NA"]
["UPN_Te4_012",12,12022649,"A","C","ETV6","ENST00000396373","missense_variant","cAc/cCc|p.His252Pro/c.755A>C",9250,1447,10736,0.134780178837556,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.55,14.55,5322,29,5372,0.00539836187639613,3928,1418,5364,0.264354958985831,"low bq","NA"]
["UPN_Te4_008",12,12043949,"A","T","ETV6","ENST00000396373","missense_variant","gAt/gTt|p.Asp443Val/c.1328A>T",30818,707,31598,0.0223748338502437,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.54,15.98,15973,26,16035,0.0016214530714063,14845,681,15563,0.0437576302769389,"low bq","NA"]
["UPN_Te4_004",13,28608235,"T","A","FLT3","ENST00000241453","missense_variant","agA/agT|p.Arg607Ser/c.1821A>T",50917,854,51981,0.0164290798561013,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.74,15.86,24624,810,25540,0.0317149569303054,26293,44,26441,0.00166408229643357,"low bq","NA"]
["UPN_Te4_014",15,90631945,"A","T","IDH2","ENST00000330062","missense_variant","aaT/aaA|p.Asn136Lys/c.408T>A",15625,194,15921,0.0121851642484769,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.99,16.08,1,0,1,0,15624,194,15920,0.0121859296482412,"low bq","NA"]
["UPN_Te4_018",17,7578439,"T","A","TP53","ENST00000269305","missense_variant","aAg/aTg|p.Lys164Met/c.491A>T",16062,175,16327,0.010718441844797,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.13,17,16062,175,16327,0.010718441844797,0,0,0,"NA","low bq","NA"]
["UPN_Te4_017",17,7578469,"C","G","TP53","ENST00000269305","missense_variant","gGc/gCc|p.Gly154Ala/c.461G>C",13432,137,13596,0.0100764930862018,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.92,14.33,6790,1,6813,0.000146778218112432,6642,136,6783,0.0200501253132832,"low bq","NA"]
["UPN_Te4_013",17,7579409,"A","C","TP53","ENST00000269305","missense_variant","cTg/cGg|p.Leu93Arg/c.278T>G",2378,63,2575,0.0244660194174757,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.97,14.21,1346,2,1355,0.0014760147601476,1032,61,1220,0.05,"low bq","NA"]
["UPN_Te4_003",17,7579469,"A","T","TP53","ENST00000269305","missense_variant","gTg/gAg|p.Val73Glu/c.218T>A",2885,33,2928,0.0112704918032787,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.89,15.73,0,0,0,"NA",2885,33,2928,0.0112704918032787,"low bq","NA"]
["UPN_Te4_003",17,7579569,"T","A","TP53","ENST00000269305","missense_variant","Atg/Ttg|p.Met40Leu/c.118A>T",7864,108,7993,0.0135118228449894,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.61,14.9,7864,108,7993,0.0135118228449894,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011",17,7579574,"T","A","TP53","ENST00000269305","missense_variant","cAa/cTa|p.Gln38Leu/c.113A>T",15402,284,15755,0.0180260234846081,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.95,18.43,15402,284,15755,0.0180260234846081,0,0,0,"NA","low bq","NA"]
["UPN_Te4_007",17,7579856,"A","T","TP53","ENST00000269305","missense_variant","ttT/ttA|p.Phe19Leu/c.57T>A",10017,150,10202,0.01470299941188,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.35,20.21,5064,64,5145,0.0124392614188533,4953,86,5057,0.01700613011667,"low bq","NA"]
["UPN_Te4_006",17,7579872,"A","C","TP53","ENST00000269305","missense_variant","cTg/cGg|p.Leu14Arg/c.41T>G",5166,97,5439,0.0178341606913035,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.71,14.41,0,0,1,0,5166,97,5438,0.0178374402353807,"low bq","NA"]
["UPN_Te4_015",17,74732947,"T","G","SRSF2","ENST00000392485","missense_variant","cAc/cCc|p.His99Pro/c.296A>C",6287,64,6381,0.0100297758971948,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.11,14.91,3207,9,3232,0.00278465346534653,3080,55,3149,0.0174658621784694,"low bq","NA"]
["UPN_Te4_020",17,74733179,"T","G","SRSF2","ENST00000392485","missense_variant","Acc/Ccc|p.Thr22Pro/c.64A>C",14360,162,14559,0.0111271378528745,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.39,15.13,7235,3,7258,0.000413337007440066,7125,159,7301,0.0217778386522394,"low bq","NA"]
["UPN_Te4_017",19,13054596,"A","C","CALR","ENST00000316448","missense_variant","Aaa/Caa|p.Lys375Gln/c.1123A>C",1583,24,1614,0.0148698884758364,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",22.51,14,1583,24,1614,0.0148698884758364,0,0,0,"NA","low bq","NA"]
["UPN_Te4_007",19,13054623,"G","T","CALR","ENST00000316448","missense_variant","Gac/Tac|p.Asp384Tyr/c.1150G>T",5348,73,5472,0.0133406432748538,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.36,14.42,2786,3,2791,0.00107488355428162,2562,70,2681,0.0261096605744125,"low bq","NA"]
["UPN_Te4_020",19,13054625,"C","G","CALR","ENST00000316448","missense_variant","gaC/gaG|p.Asp384Glu/c.1152C>G",7042,114,7164,0.0159128978224456,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.66,14.18,3567,38,3607,0.0105350706958691,3475,76,3557,0.0213663199325274,"low bq","NA"]
["UPN_Te4_005",19,13054643,"C","G","CALR","ENST00000316448","missense_variant","gaC/gaG|p.Asp390Glu/c.1170C>G",4051,49,4114,0.0119105493437044,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.07,14.27,2049,25,2080,0.0120192307692308,2002,24,2034,0.0117994100294985,"low bq","NA"]
["UPN_Te4_011",19,13054646,"A","T","CALR","ENST00000316448","missense_variant","aaA/aaT|p.Lys391Asn/c.1173A>T",6693,118,6884,0.0171411969785009,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.7,16.2,3386,69,3478,0.0198389879240943,3307,49,3406,0.0143863769817968,"low bq","NA"]
["UPN_Te4_001",19,13054654,"A","C","CALR","ENST00000316448","missense_variant","gAt/gCt|p.Asp394Ala/c.1181A>C",5023,62,5734,0.0108126961981165,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.62,14,2205,55,2874,0.0191370911621434,2818,7,2860,0.00244755244755245,"low bq","NA"]
["UPN_Te4_011",19,13054664,"T","G","CALR","ENST00000316448","missense_variant","gaT/gaG|p.Asp397Glu/c.1191T>G",3325,115,3467,0.0331698875108163,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",22.01,14.33,11,0,11,0,3314,115,3456,0.033275462962963,"low bq","NA"]
["UPN_Te4_016",19,13054682,"A","T","CALR","ENST00000316448","missense_variant","gaA/gaT|p.Glu403Asp/c.1209A>T",2117,36,2169,0.016597510373444,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.64,16.36,0,0,0,"NA",2117,36,2169,0.016597510373444,"low bq","NA"]
["UPN_Te4_001",19,33792308,"A","C","CEBPA","ENST00000498907","missense_variant","cTg/cGg|p.Leu338Arg/c.1013T>G",17620,236,17954,0.0131447031302217,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.4,15.03,17620,236,17954,0.0131447031302217,0,0,0,"NA","low bq","NA"]
["UPN_Te4_001",19,33792364,"A","C","CEBPA","ENST00000498907","missense_variant","agT/agG|p.Ser319Arg/c.957T>G",32372,2597,35398,0.0733657268772247,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.52,15.49,14996,2550,17687,0.144173686888675,17376,47,17711,0.00265371802834397,"low bq","NA"]
["UPN_Te4_006",19,33792788,"A","C","CEBPA","ENST00000498907","missense_variant","cTc/cGc|p.Leu178Arg/c.533T>G",412,76,497,0.152917505030181,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.4,14.24,163,75,244,0.307377049180328,249,1,253,0.00395256916996047,"low bq","NA"]
["UPN_Te4_011",19,33793157,"A","T","CEBPA","ENST00000498907","missense_variant","aTc/aAc|p.Ile55Asn/c.164T>A",2675,227,2980,0.0761744966442953,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.45,15.31,1572,0,1579,0,1103,227,1401,0.162027123483226,"low bq","NA"]
["UPN_Te4_014",19,33793191,"C","G","CEBPA","ENST00000498907","missense_variant","Gcc/Ccc|p.Ala44Pro/c.130G>C",1629,37,1668,0.0221822541966427,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.09,14.49,0,0,0,"NA",1629,37,1668,0.0221822541966427,"low bq","NA"]
["UPN_Te4_008",19,33793345,"T","A","CEBPA","ENST00000498907","5_prime_UTR_premature_start_codon_gain_variant","|c.-25A>T",1863,23,1892,0.0121564482029598,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.71,18.87,1863,23,1892,0.0121564482029598,0,0,0,"NA","low bq","NA"]
["UPN_Te4_002",19,45297528,"A","C","CBLC","ENST00000270279","missense_variant","cAg/cCg|p.Gln451Pro/c.1352A>C",12240,253,12558,0.0201465201465201,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.58,14.41,12240,253,12558,0.0201465201465201,0,0,0,"NA","low bq","NA"]
["UPN_Te4_006",20,31022369,"A","T","ASXL1","ENST00000375687","missense_variant","aaA/aaT|p.Lys618Asn/c.1854A>T",2220,24,2301,0.0104302477183833,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.04,14,1181,0,1191,0,1039,24,1110,0.0216216216216216,"low bq","NA"]
["UPN_Te4_004",20,31022399,"A","T","ASXL1","ENST00000375687","missense_variant","agA/agT|p.Arg628Ser/c.1884A>T",1394,27,1429,0.0188943317004899,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.71,16.3,719,1,724,0.00138121546961326,675,26,705,0.0368794326241135,"low bq","NA"]
["UPN_Te4_012",20,31022562,"A","C","ASXL1","ENST00000375687","missense_variant","Acc/Ccc|p.Thr683Pro/c.2047A>C",13118,468,13656,0.0342706502636204,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.62,19.29,6202,464,6705,0.0692020879940343,6916,4,6951,0.000575456768810243,"low bq","NA"]
["UPN_Te4_005",20,31023022,"C","T","ASXL1","ENST00000375687","missense_variant","aCt/aTt|p.Thr836Ile/c.2507C>T",40834,794,41833,0.0189802309181746,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.16,15.7,21156,28,21212,0.00132000754290025,19678,766,20621,0.0371465981281218,"low bq","NA"]
["UPN_Te4_018",20,31023026,"G","T","ASXL1","ENST00000375687","missense_variant","atG/atT|p.Met837Ile/c.2511G>T",46718,884,48443,0.0182482505212311,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.04,14.54,24845,22,24930,0.000882470918572002,21873,862,23513,0.0366605707480968,"low bq","NA"]
["UPN_Te4_009",20,31023029,"G","T","ASXL1","ENST00000375687","missense_variant","aaG/aaT|p.Lys838Asn/c.2514G>T",17738,346,18101,0.0191149660239766,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.64,14.25,9332,6,9344,0.000642123287671233,8406,340,8757,0.0388260819915496,"low bq","NA"]
["UPN_Te4_002",20,31023034,"C","T","ASXL1","ENST00000375687","missense_variant","cCt/cTt|p.Pro840Leu/c.2519C>T",36529,862,37687,0.0228726085918221,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.01,17.5,19325,15,19432,0.000771922601893783,17204,847,18255,0.0463982470556012,"low bq","NA"]
["UPN_Te4_015",20,31023036,"G","T","ASXL1","ENST00000375687","missense_variant","Gta/Tta|p.Val841Leu/c.2521G>T",29417,1284,30797,0.0416923726336981,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.15,22.19,15734,13,15812,0.000822160384518088,13683,1271,14985,0.0848181514848182,"low bq","NA"]
["UPN_Te4_012",20,31023730,"T","G","ASXL1","ENST00000375687","missense_variant","gTc/gGc|p.Val1072Gly/c.3215T>G",19614,210,19880,0.0105633802816901,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.38,14.31,9864,17,9915,0.00171457387796268,9750,193,9965,0.0193677872553939,"low bq","NA"]
["UPN_Te4_011",20,31024518,"A","C","ASXL1","ENST00000375687","missense_variant","Agt/Cgt|p.Ser1335Arg/c.4003A>C",24942,324,25873,0.0125227070691454,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.24,15.75,13146,9,13220,0.000680786686838124,11796,315,12653,0.0248952817513633,"low bq","NA"]
["UPN_Te4_018",20,57484470,"C","A","GNAS","ENST00000477931","non_coding_exon_variant","|n.766C>A",27576,641,28330,0.0226261913166255,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.24,14.88,14405,19,14448,0.00131506090808416,13171,622,13882,0.044806223887048,"low bq","NA"]
["UPN_Te4_010",21,36164446,"A","C","RUNX1","ENST00000437180","missense_variant","Tgg/Ggg|p.Trp477Gly/c.1429T>G",10339,146,10528,0.0138677811550152,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.96,14.41,5120,145,5283,0.0274465265947378,5219,1,5245,0.000190657769304099,"low bq","NA"]
["UPN_Te4_010",21,36164479,"T","G","RUNX1","ENST00000437180","missense_variant","Atg/Ctg|p.Met466Leu/c.1396A>C",10288,193,10534,0.0183216252135941,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.11,14.13,5045,190,5274,0.0360257868790292,5243,3,5260,0.000570342205323194,"low bq","NA"]
["UPN_Te4_004",21,36164491,"A","G","RUNX1","ENST00000437180","missense_variant","Tcc/Ccc|p.Ser462Pro/c.1384T>C",3166,58,3245,0.0178736517719569,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.65,18.6,51,46,103,0.446601941747573,3115,12,3142,0.00381922342457034,"low bq","NA"]
["UPN_Te4_003",21,36164610,"T","A","RUNX1","ENST00000437180","missense_variant","gAg/gTg|p.Glu422Val/c.1265A>T",375,103,1052,0.0979087452471483,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",16.74,14.28,375,103,1052,0.0979087452471483,0,0,0,"NA","low bq","NA"]
["UPN_Te4_002",21,36164623,"T","A","RUNX1","ENST00000437180","missense_variant","Atg/Ttg|p.Met418Leu/c.1252A>T",2346,760,3299,0.230372840254623,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.64,14.37,362,758,1257,0.6030230708035,1984,2,2042,0.000979431929480901,"low bq","NA"]
["UPN_Te4_007",21,36164628,"A","C","RUNX1","ENST00000437180","missense_variant","tTc/tGc|p.Phe416Cys/c.1247T>G",3935,45,4150,0.0108433734939759,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.98,14,1295,36,1485,0.0242424242424242,2640,9,2665,0.00337711069418386,"low bq","NA"]
["UPN_Te4_008",21,36164630,"C","A","RUNX1","ENST00000437180","missense_variant","caG/caT|p.Gln415His/c.1245G>T",7491,135,7698,0.0175370226032736,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.33,14,2651,135,2814,0.0479744136460554,4840,0,4884,0,"low bq","NA"]
["UPN_Te4_010",21,36164631,"T","G","RUNX1","ENST00000437180","missense_variant","cAg/cCg|p.Gln415Pro/c.1244A>C",3040,284,3824,0.0742677824267782,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.98,14.15,552,281,1319,0.213040181956027,2488,3,2505,0.00119760479041916,"low bq","NA"]
["UPN_Te4_012",21,36164638,"A","C","RUNX1","ENST00000437180","missense_variant","Tcc/Gcc|p.Ser413Ala/c.1237T>G",3501,96,3699,0.0259529602595296,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.64,14.32,1497,92,1688,0.0545023696682464,2004,4,2011,0.00198906016907011,"low bq","NA"]
["UPN_Te4_012",21,36164647,"A","C","RUNX1","ENST00000437180","missense_variant","Tcg/Gcg|p.Ser410Ala/c.1228T>G",3099,526,3651,0.144070117775952,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.1,14.29,1097,526,1640,0.320731707317073,2002,0,2011,0,"low bq","NA"]
["UPN_Te4_006",21,36164647,"A","G","RUNX1","ENST00000437180","missense_variant","Tcg/Ccg|p.Ser410Pro/c.1228T>C",3788,113,4333,0.026078929148396,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.67,15.42,941,107,1474,0.0725915875169607,2847,6,2859,0.00209863588667366,"low bq","NA"]
["UPN_Te4_010",21,36164658,"T","G","RUNX1","ENST00000437180","missense_variant","tAc/tCc|p.Tyr406Ser/c.1217A>C",3330,221,3577,0.0617836175566117,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.03,14.06,833,220,1070,0.205607476635514,2497,1,2507,0.000398883127243718,"low bq","NA"]
["UPN_Te4_012",21,36164664,"T","G","RUNX1","ENST00000437180","missense_variant","cAc/cCc|p.His404Pro/c.1211A>C",2971,517,3502,0.14762992575671,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.16,14.38,990,492,1491,0.329979879275654,1981,25,2011,0.0124316260566882,"low bq","NA"]
["UPN_Te4_008",21,36164671,"A","G","RUNX1","ENST00000437180","missense_variant","Tcc/Ccc|p.Ser402Pro/c.1204T>C",6498,302,6890,0.0438316400580551,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.89,15.08,1655,290,1999,0.145072536268134,4843,12,4891,0.00245348599468411,"low bq","NA"]
["UPN_Te4_005",21,36171719,"A","T","RUNX1","ENST00000437180","missense_variant","gaT/gaA|p.Asp282Glu/c.846T>A",18408,198,18672,0.0106041131105398,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.83,16.67,803,6,816,0.00735294117647059,17605,192,17856,0.010752688172043,"low bq","NA"]
["UPN_Te4_016",21,36206758,"A","T","RUNX1","ENST00000437180","missense_variant","Tcc/Acc|p.Ser252Thr/c.754T>A",5254,239,5736,0.0416666666666667,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.48,15.41,3339,9,3357,0.00268096514745308,1915,230,2379,0.0966792770071459,"low bq","NA"]
["UPN_Te4_019",21,36206763,"C","G","RUNX1","ENST00000437180","missense_variant","cGt/cCt|p.Arg250Pro/c.749G>C",2917,152,3085,0.0492706645056726,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.8,14.27,1630,0,1639,0,1287,152,1446,0.105117565698479,"low bq","NA"]
["UPN_Te4_022",21,36206782,"C","G","RUNX1","ENST00000437180","missense_variant","Gcc/Ccc|p.Ala244Pro/c.730G>C",4946,106,5074,0.0208908159243201,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.87,14,2577,5,2586,0.00193348801237432,2369,101,2488,0.0405948553054662,"low bq","NA"]
["UPN_Te4_004",21,36206790,"T","G","RUNX1","ENST00000437180","missense_variant","cAc/cCc|p.His241Pro/c.722A>C",3588,277,3877,0.0714469950993036,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.05,14.67,1996,1,2002,0.0004995004995005,1592,276,1875,0.1472,"low bq","NA"]
["UPN_Te4_003",21,36231843,"T","G","RUNX1","ENST00000437180","missense_variant","Aca/Cca|p.Thr181Pro/c.541A>C",18915,724,19741,0.0366749404792057,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.43,15.62,9975,17,10048,0.00169187898089172,8940,707,9693,0.0729392344991231,"low bq","NA"]
["UPN_Te4_015",21,36259255,"A","C","RUNX1","ENST00000437180","missense_variant","gTg/gGg|p.Val79Gly/c.236T>G",16321,182,16669,0.010918471414002,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.66,14.15,8149,177,8377,0.0211292825593888,8172,5,8292,0.000602990834539315,"low bq","NA"]
["UPN_Te4_015",21,36265239,"G","T","RUNX1","ENST00000437180","missense_variant","cCt/cAt|p.Pro27His/c.80C>A",2003,44,2051,0.0214529497805948,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.91,15.32,1951,8,1963,0.00407539480387163,52,36,88,0.409090909090909,"low bq","NA"]
["UPN_Te4_017",21,36265249,"C","A","RUNX1","ENST00000437180","stop_gained","Gga/Tga|p.Gly24*/c.70G>T",5142,74,5223,0.0141681026230136,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.71,14.86,4039,27,4069,0.00663553698697469,1103,47,1154,0.0407279029462738,"low bq","NA"]
["UPN_Te4_016",21,36265256,"G","T","RUNX1","ENST00000437180","stop_gained","tgC/tgA|p.Cys21*/c.63C>A",5067,303,5381,0.0563092362014495,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.8,14.3,3314,12,3334,0.00359928014397121,1753,291,2047,0.142159257449927,"low bq","NA"]
["UPN_Te4_009",21,36265257,"C","A","RUNX1","ENST00000437180","missense_variant","tGc/tTc|p.Cys21Phe/c.62G>T",4746,61,4839,0.0126059103120479,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.84,15.59,2722,31,2755,0.0112522686025408,2024,30,2084,0.0143953934740883,"low bq","NA"]
["UPN_Te4_011",21,44524505,"A","T","U2AF1","ENST00000291552","missense_variant","Tgt/Agt|p.Cys18Ser/c.52T>A",19240,257,19566,0.0131350301543494,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.58,18.73,0,0,0,"NA",19240,257,19566,0.0131350301543494,"low bq","NA"]
["UPN_Te4_017","X",15827409,"C","A","ZRSR2","ENST00000307771","stop_gained","taC/taA|p.Tyr175*/c.525C>A",14979,517,15527,0.0332968377664713,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.35,14.73,7849,12,7872,0.00152439024390244,7130,505,7655,0.0659699542782495,"low bq","NA"]
["UPN_Te4_010","X",15841158,"T","A","ZRSR2","ENST00000307771","missense_variant","agT/agA|p.Ser414Arg/c.1242T>A",2006,27,2047,0.013190034196385,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.65,14.67,1997,27,2038,0.0132482826300294,9,0,9,0,"low bq","NA"]
["UPN_Te4_008","X",15841194,"T","A","ZRSR2","ENST00000307771","missense_variant","aaT/aaA|p.Asn426Lys/c.1278T>A",12187,298,12506,0.0238285622901008,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.24,17.91,5888,267,6164,0.0433160285528877,6299,31,6342,0.00488804793440555,"low bq","NA"]
["UPN_Te4_020","X",39913201,"T","A","BCOR","ENST00000378444","missense_variant","gaA/gaT|p.Glu1638Asp/c.4914A>T",9402,96,9542,0.0100607839027458,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.27,14,4823,2,4846,0.000412711514651259,4579,94,4696,0.0200170357751278,"low bq","NA"]
["UPN_Te4_005","X",39916555,"A","T","BCOR","ENST00000378444","stop_gained","tTa/tAa|p.Leu1483*/c.4448T>A",2015,21,2044,0.0102739726027397,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.25,15.05,0,0,0,"NA",2015,21,2044,0.0102739726027397,"low bq","NA"]
["UPN_Te4_017","X",39921493,"T","G","BCOR","ENST00000378444","missense_variant","Acc/Ccc|p.Thr1443Pro/c.4327A>C",4607,85,4718,0.0180161085205596,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.89,15.62,2357,7,2376,0.00294612794612795,2250,78,2342,0.0333048676345004,"low bq","NA"]
["UPN_Te4_007","X",39921546,"A","T","BCOR","ENST00000378444","missense_variant","cTg/cAg|p.Leu1425Gln/c.4274T>A",3095,40,3141,0.0127347978350844,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.86,18.27,0,0,0,"NA",3095,40,3141,0.0127347978350844,"low bq","NA"]
["UPN_Te4_015","X",39921565,"A","T","BCOR","ENST00000378444","missense_variant","Ttc/Atc|p.Phe1419Ile/c.4255T>A",4744,56,4843,0.0115630807350816,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.17,16.34,0,0,0,"NA",4744,56,4843,0.0115630807350816,"low bq","NA"]
["UPN_Te4_018","X",39922259,"T","A","BCOR","ENST00000378444","stop_gained","Aag/Tag|p.Lys1305*/c.3913A>T",8251,107,8404,0.0127320323655402,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.74,15.5,8251,107,8404,0.0127320323655402,0,0,0,"NA","low bq","NA"]
["UPN_Te4_010","X",39922285,"A","C","BCOR","ENST00000378444","missense_variant","cTt/cGt|p.Leu1296Arg/c.3887T>G",4792,185,5253,0.035217970683419,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.3,14,2761,0,2779,0,2031,185,2474,0.0747776879547292,"low bq","NA"]
["UPN_Te4_021","X",39922294,"A","T","BCOR","ENST00000378444","missense_variant","aTg/aAg|p.Met1293Lys/c.3878T>A",8482,368,8874,0.0414694613477575,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.24,14.97,4469,3,4484,0.000669045495093666,4013,365,4390,0.0831435079726651,"low bq","NA"]
["UPN_Te4_008","X",39922310,"A","T","BCOR","ENST00000378444","missense_variant","Tcc/Acc|p.Ser1288Thr/c.3862T>A",9185,152,9358,0.0162427869202821,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.99,15.91,6403,12,6429,0.00186654223051797,2782,140,2929,0.0477978832365995,"low bq","NA"]
["UPN_Te4_012","X",39922311,"G","T","BCOR","ENST00000378444","missense_variant","ttC/ttA|p.Phe1287Leu/c.3861C>A",3844,92,4027,0.0228457909113484,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.73,14.77,2564,15,2669,0.00562008242787561,1280,77,1358,0.0567010309278351,"low bq","NA"]
["UPN_Te4_018","X",39923130,"T","A","BCOR","ENST00000378444","missense_variant","aAc/aTc|p.Asn1193Ile/c.3578A>T",16523,181,16792,0.0107789423535017,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.08,17.38,15495,178,15755,0.0112980006347191,1028,3,1037,0.00289296046287367,"low bq","NA"]
["UPN_Te4_012","X",39923636,"A","C","BCOR","ENST00000378444","missense_variant","gTg/gGg|p.Val1152Gly/c.3455T>G",5340,81,5450,0.0148623853211009,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.48,15,5305,81,5415,0.0149584487534626,35,0,35,0,"low bq","NA"]
["UPN_Te4_015","X",39923732,"A","T","BCOR","ENST00000378444","missense_variant","gTg/gAg|p.Val1120Glu/c.3359T>A",10775,115,10924,0.0105272793848407,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.02,17.35,0,0,0,"NA",10775,115,10924,0.0105272793848407,"low bq","NA"]
["UPN_Te4_012","X",39930903,"G","T","BCOR","ENST00000378444","missense_variant","gCt/gAt|p.Ala1013Asp/c.3038C>A",4224,45,4274,0.0105287786616752,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.84,14,2147,6,2157,0.00278164116828929,2077,39,2117,0.0184222957014643,"low bq","NA"]
["UPN_Te4_008","X",39930926,"C","A","BCOR","ENST00000378444","missense_variant","gaG/gaT|p.Glu1005Asp/c.3015G>T",8880,188,9080,0.020704845814978,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.28,14.36,4335,172,4512,0.0381205673758865,4545,16,4568,0.00350262697022767,"low bq","NA"]
["UPN_Te4_004","X",39932002,"T","G","BCOR","ENST00000378444","missense_variant","cAc/cCc|p.His866Pro/c.2597A>C",17409,1252,18745,0.066791144305148,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.29,16.76,9369,14,9444,0.00148242270224481,8040,1238,9301,0.133103967315342,"low bq","NA"]
["UPN_Te4_004","X",39933484,"A","T","BCOR","ENST00000378444","missense_variant","cTg/cAg|p.Leu372Gln/c.1115T>A",27144,294,27560,0.0106676342525399,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.53,16.73,13717,27,13796,0.00195708901130763,13427,267,13764,0.0193984306887533,"low bq","NA"]
["UPN_Te4_015","X",39934364,"G","C","BCOR","ENST00000378444","missense_variant","Cgg/Ggg|p.Arg79Gly/c.235C>G",18506,252,18843,0.0133736666135966,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.78,14.46,9167,241,9433,0.0255486059578077,9339,11,9410,0.00116896918172157,"low bq","NA"]
["UPN_Te4_009","X",44820601,"G","T","KDM6A","ENST00000377967","missense_variant","Ggt/Tgt|p.Gly100Cys/c.298G>T",3212,43,3259,0.0131942313593127,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.64,17.28,4,1,5,0.2,3208,42,3254,0.0129071911493546,"low bq","NA"]
["UPN_Te4_015","X",44820611,"A","T","KDM6A","ENST00000377967","missense_variant","aAc/aTc|p.Asn103Ile/c.308A>T",5131,71,5221,0.0135989274085424,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.21,17.49,0,0,0,"NA",5131,71,5221,0.0135989274085424,"low bq","NA"]
["UPN_Te4_020","X",44833951,"C","A","KDM6A","ENST00000377967","missense_variant","gaC/gaA|p.Asp125Glu/c.375C>A",6643,249,6909,0.0360399478940512,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.02,14.71,3502,3,3508,0.000855188141391106,3141,246,3401,0.0723316671567186,"low bq","NA"]
["UPN_Te4_017","X",44918259,"C","A","KDM6A","ENST00000377967","stop_gained","tCa/tAa|p.Ser295*/c.884C>A",10128,2553,12794,0.199546662498046,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",17.14,14.45,3883,2389,6281,0.380353446903359,6245,164,6513,0.0251804084139413,"low bq","NA"]
["UPN_Te4_021","X",44918264,"A","T","KDM6A","ENST00000377967","missense_variant","Att/Ttt|p.Ile297Phe/c.889A>T",2932,102,3037,0.0335857754362858,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.4,14.18,1413,82,1497,0.0547762191048764,1519,20,1540,0.012987012987013,"low bq","NA"]
["UPN_Te4_015","X",44918271,"A","T","KDM6A","ENST00000377967","missense_variant","aAa/aTa|p.Lys299Ile/c.896A>T",6002,62,6088,0.0101839684625493,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.35,17.27,2815,13,2839,0.00457907713983797,3187,49,3249,0.0150815635580179,"low bq","NA"]
["UPN_Te4_014","X",44918276,"C","A","KDM6A","ENST00000377967","missense_variant","Cag/Aag|p.Gln301Lys/c.901C>A",8806,1708,10602,0.161101678928504,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24,14.25,3218,1672,4924,0.339561332250203,5588,36,5678,0.00634026065516027,"low bq","NA"]
["UPN_Te4_021","X",44918278,"G","T","KDM6A","ENST00000377967","missense_variant","caG/caT|p.Gln301His/c.903G>T",2894,151,3049,0.0495244342407347,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.91,14.26,1464,18,1484,0.0121293800539084,1430,133,1565,0.0849840255591054,"low bq","NA"]
["UPN_Te4_016","X",44918282,"G","T","KDM6A","ENST00000377967","missense_variant","Gcc/Tcc|p.Ala303Ser/c.907G>T",13627,154,13824,0.0111400462962963,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.81,14.49,6421,61,6511,0.00936876055905391,7206,93,7313,0.0127170791740736,"low bq","NA"]
["UPN_Te4_007","X",44918292,"C","G","KDM6A","ENST00000377967","missense_variant","tCt/tGt|p.Ser306Cys/c.917C>G",8404,176,10313,0.0170658392320372,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.56,14,2792,165,4655,0.0354457572502685,5612,11,5658,0.00194414987628137,"low bq","NA"]
["UPN_Te4_012","X",44918300,"C","A","KDM6A","ENST00000377967","missense_variant","Cag/Aag|p.Gln309Lys/c.925C>A",10305,258,10637,0.0242549591050108,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.93,14.21,4620,187,4819,0.0388047312720481,5685,71,5818,0.0122035063595737,"low bq","NA"]
["UPN_Te4_007","X",44918302,"G","T","KDM6A","ENST00000377967","missense_variant","caG/caT|p.Gln309His/c.927G>T",7514,131,7666,0.0170884424732585,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.99,14.34,1892,108,2005,0.0538653366583541,5622,23,5661,0.00406288641582759,"low bq","NA"]
["UPN_Te4_019","X",44918309,"G","T","KDM6A","ENST00000377967","missense_variant","Gat/Tat|p.Asp312Tyr/c.934G>T",2424,55,2484,0.0221417069243156,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.05,14.24,0,0,0,"NA",2424,55,2484,0.0221417069243156,"low bq","NA"]
["UPN_Te4_021","X",44918327,"G","T","KDM6A","ENST00000377967","missense_variant","Gca/Tca|p.Ala318Ser/c.952G>T",5348,76,5435,0.0139834406623735,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.94,14.29,3808,2,3816,0.000524109014675052,1540,74,1619,0.0457072266831377,"low bq","NA"]
["UPN_Te4_022","X",44928846,"C","A","KDM6A","ENST00000377967","stop_gained","tCa/tAa|p.Ser649*/c.1946C>A",3993,1211,5210,0.232437619961612,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.3,16.29,1386,1211,2598,0.46612779060816,2607,0,2612,0,"low bq","NA"]
["UPN_Te4_018","X",44929040,"T","A","KDM6A","ENST00000377967","missense_variant","Tta/Ata|p.Leu714Ile/c.2140T>A",25810,278,26266,0.0105840249752532,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.44,18,12651,241,13011,0.0185227884098071,13159,37,13255,0.0027913994718974,"low bq","NA"]
["UPN_Te4_005","X",44935945,"T","A","KDM6A","ENST00000377967","missense_variant","aaT/aaA|p.Asn902Lys/c.2706T>A",22272,806,23291,0.0346056416641621,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.66,14.89,22272,806,23291,0.0346056416641621,0,0,0,"NA","low bq","NA"]
["UPN_Te4_013","X",44935947,"T","A","KDM6A","ENST00000377967","missense_variant","cTa/cAa|p.Leu903Gln/c.2708T>A",8980,198,9229,0.0214541120381406,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.37,15.44,8980,198,9229,0.0214541120381406,0,0,0,"NA","low bq","NA"]
["UPN_Te4_002","X",44935964,"T","A","KDM6A","ENST00000377967","missense_variant","Tct/Act|p.Ser909Thr/c.2725T>A",19095,687,19919,0.034489683217029,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.65,14.46,19095,687,19919,0.034489683217029,0,0,0,"NA","low bq","NA"]
["UPN_Te4_006","X",44935965,"C","A","KDM6A","ENST00000377967","missense_variant","tCt/tAt|p.Ser909Tyr/c.2726C>A",18456,2236,20868,0.107149702894384,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.3,14.11,18456,2236,20868,0.107149702894384,0,0,0,"NA","low bq","NA"]
["UPN_Te4_016","X",44935971,"G","T","KDM6A","ENST00000377967","missense_variant","aGt/aTt|p.Ser911Ile/c.2732G>T",18910,548,19506,0.0280939198195427,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.1,14.33,18910,548,19506,0.0280939198195427,0,0,0,"NA","low bq","NA"]
["UPN_Te4_005","X",44935975,"C","A","KDM6A","ENST00000377967","missense_variant","agC/agA|p.Ser912Arg/c.2736C>A",21522,1463,23069,0.0634184403311804,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.28,14.26,21522,1463,23069,0.0634184403311804,0,0,0,"NA","low bq","NA"]
["UPN_Te4_003","X",44935986,"A","T","KDM6A","ENST00000377967","missense_variant","gAt/gTt|p.Asp916Val/c.2747A>T",14899,163,15127,0.010775434653269,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.47,16.34,14899,163,15127,0.010775434653269,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018","X",44935987,"T","A","KDM6A","ENST00000377967","missense_variant","gaT/gaA|p.Asp916Glu/c.2748T>A",22605,371,23038,0.0161038284573314,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.04,15.36,22605,371,23038,0.0161038284573314,0,0,0,"NA","low bq","NA"]
["UPN_Te4_009","X",44935993,"T","A","KDM6A","ENST00000377967","stop_gained","tgT/tgA|p.Cys918*/c.2754T>A",8477,163,8717,0.0186990937249054,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.79,14.57,8477,163,8717,0.0186990937249054,0,0,0,"NA","low bq","NA"]
["UPN_Te4_007","X",44935997,"C","A","KDM6A","ENST00000377967","missense_variant","Cct/Act|p.Pro920Thr/c.2758C>A",11353,116,11475,0.0101089324618736,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.23,14.22,11353,116,11475,0.0101089324618736,0,0,0,"NA","low bq","NA"]
["UPN_Te4_015","X",44936001,"C","A","KDM6A","ENST00000377967","missense_variant","cCa/cAa|p.Pro921Gln/c.2762C>A",13418,442,13886,0.03183062076912,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.03,14.26,13418,442,13886,0.03183062076912,0,0,0,"NA","low bq","NA"]
["UPN_Te4_021","X",44936005,"A","C","KDM6A","ENST00000377967","missense_variant","agA/agC|p.Arg922Ser/c.2766A>C",4748,331,5093,0.0649911643432162,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.89,14.46,4748,331,5093,0.0649911643432162,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018","X",44936013,"C","A","KDM6A","ENST00000377967","missense_variant","tCt/tAt|p.Ser925Tyr/c.2774C>A",19894,2299,22483,0.102255037139172,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.19,14.23,19894,2299,22483,0.102255037139172,0,0,0,"NA","low bq","NA"]
["UPN_Te4_012","X",44936019,"C","A","KDM6A","ENST00000377967","missense_variant","cCa/cAa|p.Pro927Gln/c.2780C>A",9791,422,10229,0.0412552546681005,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.94,14.21,9786,422,10224,0.0412754303599374,5,0,5,0,"low bq","NA"]
["UPN_Te4_007","X",44936021,"T","A","KDM6A","ENST00000377967","missense_variant","Tac/Aac|p.Tyr928Asn/c.2782T>A",10777,792,11599,0.0682817484265885,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",22.99,14.87,10488,786,11304,0.0695329087048832,289,6,295,0.0203389830508475,"low bq","NA"]
["UPN_Te4_014","X",44936025,"C","A","KDM6A","ENST00000377967","missense_variant","cCt/cAt|p.Pro929His/c.2786C>A",25761,752,26589,0.0282823724096431,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.96,14.61,12490,649,13171,0.0492749221775112,13271,103,13418,0.00767625577582352,"low bq","NA"]
["UPN_Te4_001","X",44936038,"G","T","KDM6A","ENST00000377967","missense_variant","aaG/aaT|p.Lys933Asn/c.2799G>T",23079,377,23523,0.0160268673213451,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.45,14.59,11444,55,11543,0.00476479251494412,11635,322,11980,0.0268781302170284,"low bq","NA"]
["UPN_Te4_002","X",44936044,"G","T","KDM6A","ENST00000377967","missense_variant","aaG/aaT|p.Lys935Asn/c.2805G>T",38753,751,39590,0.0189694367264461,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.69,15.05,18429,586,19081,0.0307111786593994,20324,165,20509,0.00804524842751963,"low bq","NA"]
["UPN_Te4_008","X",44936050,"T","A","KDM6A","ENST00000377967","missense_variant","aaT/aaA|p.Asn937Lys/c.2811T>A",11686,606,12317,0.049200292278964,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.38,15.08,2461,598,3069,0.19485174323884,9225,8,9248,0.000865051903114187,"low bq","NA"]
["UPN_Te4_021","X",44936051,"C","A","KDM6A","ENST00000377967","missense_variant","Cca/Aca|p.Pro938Thr/c.2812C>A",5974,111,6116,0.0181491170699804,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.97,14.46,901,25,927,0.0269687162891046,5073,86,5189,0.0165735209096165,"low bq","NA"]
["UPN_Te4_015","X",44936063,"A","T","KDM6A","ENST00000377967","missense_variant","Agt/Tgt|p.Ser942Cys/c.2824A>T",14052,177,14277,0.012397562513133,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.74,16.42,0,0,0,"NA",14052,177,14277,0.012397562513133,"low bq","NA"]
["UPN_Te4_020","X",44938406,"C","A","KDM6A","ENST00000377967","missense_variant","tCt/tAt|p.Ser985Tyr/c.2954C>A",7472,297,7787,0.0381404905611917,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.38,14.49,3529,294,3836,0.0766423357664234,3943,3,3951,0.000759301442672741,"low bq","NA"]
["UPN_Te4_005","X",44938420,"G","T","KDM6A","ENST00000377967","missense_variant","Gtg/Ttg|p.Val990Leu/c.2968G>T",24055,420,24510,0.0171358629130967,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.73,14.28,11647,403,12070,0.0333885666942833,12408,17,12440,0.00136655948553055,"low bq","NA"]
["UPN_Te4_019","X",44938427,"C","A","KDM6A","ENST00000377967","missense_variant","gCt/gAt|p.Ala992Asp/c.2975C>A",4570,146,4733,0.0308472427635749,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.1,14.36,2163,146,2322,0.0628768303186908,2407,0,2411,0,"low bq","NA"]
["UPN_Te4_007","X",44938589,"C","A","KDM6A","ENST00000377967","stop_gained","tCa/tAa|p.Ser1046*/c.3137C>A",6137,301,6466,0.046551190844417,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.46,14.63,3237,7,3250,0.00215384615384615,2900,294,3216,0.0914179104477612,"low bq","NA"]
["UPN_Te4_012","X",44938589,"C","A","KDM6A","ENST00000377967","stop_gained","tCa/tAa|p.Ser1046*/c.3137C>A",6513,204,6747,0.0302356602934638,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.75,14.62,3393,7,3403,0.00205700852189245,3120,197,3344,0.0589114832535885,"low bq","NA"]
["UPN_Te4_006","X",44949988,"G","T","KDM6A","ENST00000377967","missense_variant","Gtg/Ttg|p.Val1253Leu/c.3757G>T",20161,206,20385,0.0101054697081187,0,0,0,1,0,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.89,14.36,20161,206,20385,0.0101054697081187,0,0,0,"NA","low bq","NA"]
["UPN_Te4_008","X",44950004,"G","T","KDM6A","ENST00000377967","missense_variant","tGg/tTg|p.Trp1258Leu/c.3773G>T",2224,28,2254,0.0124223602484472,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.27,14.71,2224,28,2254,0.0124223602484472,0,0,0,"NA","low bq","NA"]
["UPN_Te4_005","X",44950015,"C","A","KDM6A","ENST00000377967","missense_variant","Caa/Aaa|p.Gln1262Lys/c.3784C>A",40995,762,41858,0.0182044053705385,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.69,14.37,20321,623,20985,0.0296878722897308,20674,139,20873,0.00665932065347578,"low bq","NA"]
["UPN_Te4_013","X",44950026,"G","T","KDM6A","ENST00000377967","missense_variant","aaG/aaT|p.Lys1265Asn/c.3795G>T",8952,151,9127,0.0165443190533582,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.02,14.72,4439,117,4569,0.025607353906763,4513,34,4558,0.00745941202281702,"low bq","NA"]
["UPN_Te4_011","X",44950037,"C","A","KDM6A","ENST00000377967","missense_variant","cCc/cAc|p.Pro1269His/c.3806C>A",16038,178,16306,0.0109162271556482,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.2,17.55,8031,95,8140,0.0116707616707617,8007,83,8166,0.0101640950281656,"low bq","NA"]
["UPN_Te4_004","X",44950052,"C","A","KDM6A","ENST00000377967","missense_variant","tCc/tAc|p.Ser1274Tyr/c.3821C>A",34836,530,35458,0.0149472615488747,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.13,14.17,17092,450,17570,0.0256118383608423,17744,80,17888,0.00447227191413238,"low bq","NA"]
["UPN_Te4_020","X",44950063,"G","T","KDM6A","ENST00000377967","missense_variant","Gca/Tca|p.Ala1278Ser/c.3832G>T",5127,131,5276,0.0248294162244124,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.73,14.46,2607,9,2630,0.00342205323193916,2520,122,2646,0.0461073318216175,"low bq","NA"]
["UPN_Te4_015","X",44950077,"G","T","KDM6A","ENST00000377967","missense_variant","aaG/aaT|p.Lys1282Asn/c.3846G>T",8648,88,8744,0.010064043915828,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.17,14.56,4240,26,4271,0.00608756731444627,4408,62,4473,0.0138609434384082,"low bq","NA"]
["UPN_Te4_005","X",44969396,"G","T","KDM6A","ENST00000377967","missense_variant","Gat/Tat|p.Asp1360Tyr/c.4078G>T",10827,463,11301,0.0409698256791434,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.15,14.38,5737,6,5746,0.00104420466411417,5090,457,5555,0.0822682268226823,"low bq","NA"]
["UPN_Te4_011","X",53423456,"A","T","SMC1A","ENST00000322213","missense_variant","Tcg/Acg|p.Ser882Thr/c.2644T>A",9404,97,9577,0.0101284327033518,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.96,18.69,4787,10,4842,0.00206526228831062,4617,87,4735,0.0183738120380148,"low bq","NA"]
["UPN_Te4_005","X",53442061,"A","T","SMC1A","ENST00000322213","missense_variant","cTg/cAg|p.Leu56Gln/c.167T>A",10051,111,10200,0.0108823529411765,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.92,16.44,0,0,0,"NA",10051,111,10200,0.0108823529411765,"low bq","NA"]
["UPN_Te4_014","X",53442061,"A","T","SMC1A","ENST00000322213","missense_variant","cTg/cAg|p.Leu56Gln/c.167T>A",6009,76,6113,0.0124325208571896,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.3,16.64,26,0,26,0,5983,76,6087,0.0124856251026778,"low bq","NA"]
["UPN_Te4_015","X",76778792,"C","A","ATRX","ENST00000373344","stop_gained","Gaa/Taa|p.Glu2263*/c.6787G>T",6642,608,7520,0.0808510638297872,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.21,14.49,3839,24,3868,0.0062047569803516,2803,584,3652,0.159912376779847,"low bq","NA"]
["UPN_Te4_011","X",76812962,"G","T","ATRX","ENST00000373344","stop_gained","tCa/tAa|p.Ser2220*/c.6659C>A",17798,1494,19313,0.077357220525035,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.09,14.48,9803,14,9830,0.00142421159715158,7995,1480,9483,0.156068754613519,"low bq","NA"]
["UPN_Te4_017","X",76829748,"C","A","ATRX","ENST00000373344","missense_variant","tGg/tTg|p.Trp2098Leu/c.6293G>T",12611,135,12771,0.0105708245243129,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.86,14.82,6235,134,6378,0.0210097209156475,6376,1,6393,0.000156421085562334,"low bq","NA"]
["UPN_Te4_008","X",76854940,"C","A","ATRX","ENST00000373344","missense_variant","Ggt/Tgt|p.Gly1966Cys/c.5896G>T",10074,126,10207,0.0123444694817282,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.77,14.47,10074,126,10207,0.0123444694817282,0,0,0,"NA","low bq","NA"]
["UPN_Te4_002","X",76874394,"G","T","ATRX","ENST00000373344","missense_variant","ttC/ttA|p.Phe1776Leu/c.5328C>A",38657,10676,49424,0.216008416963419,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.31,15.12,24728,22,24799,0.000887132545667164,13929,10654,24625,0.432649746192893,"low bq","NA"]
["UPN_Te4_011","X",76875949,"G","T","ATRX","ENST00000373344","missense_variant","tCt/tAt|p.Ser1729Tyr/c.5186C>A",6369,620,7046,0.0879931876241839,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.14,14.29,3604,10,3619,0.00276319425255595,2765,610,3427,0.177998249197549,"low bq","NA"]
["UPN_Te4_015","X",76890145,"C","A","ATRX","ENST00000373344","missense_variant","aaG/aaT|p.Lys1583Asn/c.4749G>T",16074,1860,18388,0.101152925821188,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.74,14.52,9381,20,9408,0.00212585034013605,6693,1840,8980,0.204899777282851,"low bq","NA"]
["UPN_Te4_013","X",76920254,"T","A","ATRX","ENST00000373344","missense_variant","Atg/Ttg|p.Met1275Leu/c.3823A>T",9532,205,9769,0.0209847476712048,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.8,16.87,4639,192,4847,0.0396121312151846,4893,13,4922,0.00264120276310443,"low bq","NA"]
["UPN_Te4_011","X",123184971,"C","A","STAG2","ENST00000218089","missense_variant","Caa/Aaa|p.Gln340Lys/c.1018C>A",8148,1370,9997,0.1370411123337,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.47,14.18,1087,700,1803,0.388241819190238,7061,670,8194,0.081767146692702,"low bq","NA"]
["UPN_Te4_019","X",123184974,"G","T","STAG2","ENST00000218089","missense_variant","Ggt/Tgt|p.Gly341Cys/c.1021G>T",1094,825,1921,0.429463820926601,0,0,0,0,1,0,1,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",15.68,14.15,569,10,580,0.0172413793103448,525,815,1341,0.607755406413125,"low bq","NA"]
["UPN_Te4_021","X",123184980,"G","T","STAG2","ENST00000218089","missense_variant","Gta/Tta|p.Val343Leu/c.1027G>T",896,346,1244,0.278135048231511,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",16.33,14.19,205,136,341,0.398826979472141,691,210,903,0.232558139534884,"low bq","NA"]
["UPN_Te4_007","X",123184986,"C","A","STAG2","ENST00000218089","missense_variant","Ctc/Atc|p.Leu345Ile/c.1033C>A",6290,1097,7577,0.14478025603801,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",22.48,14.13,315,103,420,0.245238095238095,5975,994,7157,0.138885007684784,"low bq","NA"]
["UPN_Te4_022","X",123184986,"C","A","STAG2","ENST00000218089","missense_variant","Ctc/Atc|p.Leu345Ile/c.1033C>A",2540,732,3346,0.218768679019725,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",15.56,14.04,614,151,774,0.195090439276486,1926,581,2572,0.225894245723173,"low bq","NA"]
["UPN_Te4_008","X",123184995,"C","A","STAG2","ENST00000218089","missense_variant","Ctt/Att|p.Leu348Ile/c.1042C>A",2043,370,2460,0.150406504065041,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.2,14.18,12,24,37,0.648648648648649,2031,346,2423,0.142798184069336,"low bq","NA"]
["UPN_Te4_022","X",123184999,"C","A","STAG2","ENST00000218089","missense_variant","aCt/aAt|p.Thr349Asn/c.1046C>A",2541,180,2743,0.0656215822092599,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",16.68,14,2,3,5,0.6,2539,177,2738,0.064645726807889,"low bq","NA"]
["UPN_Te4_001","X",123185004,"C","A","STAG2","ENST00000218089","missense_variant","Cta/Ata|p.Leu351Ile/c.1051C>A",7137,308,7503,0.0410502465680395,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.85,14.33,0,0,0,"NA",7137,308,7503,0.0410502465680395,"low bq","NA"]
["UPN_Te4_022","X",123185010,"G","T","STAG2","ENST00000218089","missense_variant","Ggg/Tgg|p.Gly353Trp/c.1057G>T",2052,787,2841,0.277015135515663,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",16.67,14.12,0,0,0,"NA",2052,787,2841,0.277015135515663,"low bq","NA"]
["UPN_Te4_003","X",123185013,"C","A","STAG2","ENST00000218089","missense_variant","Ctt/Att|p.Leu354Ile/c.1060C>A",9224,1676,11080,0.151263537906137,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",22.73,14.14,0,0,0,"NA",9224,1676,11080,0.151263537906137,"low bq","NA"]
["UPN_Te4_018","X",123185026,"A","T","STAG2","ENST00000218089","missense_variant","aAa/aTa|p.Lys358Ile/c.1073A>T",15038,177,15234,0.0116187475384009,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.88,14.76,20,0,20,0,15018,177,15214,0.0116340212961746,"low bq","NA"]
["UPN_Te4_016","X",123191744,"G","T","STAG2","ENST00000218089","missense_variant","Gat/Tat|p.Asp445Tyr/c.1333G>T",26295,313,26663,0.0117391141281926,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.54,15.7,13018,244,13296,0.0183513838748496,13277,69,13367,0.00516196603575971,"low bq","NA"]
["UPN_Te4_012","X",123195624,"T","A","STAG2","ENST00000218089","missense_variant","cTa/cAa|p.Leu513Gln/c.1538T>A",220,113,334,0.338323353293413,0,0,0,1,0,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",14.86,14.19,220,113,334,0.338323353293413,0,0,0,"NA","low bq","bad alignment"]
["UPN_Te4_015","X",123195629,"G","T","STAG2","ENST00000218089","missense_variant","Gat/Tat|p.Asp515Tyr/c.1543G>T",443,40,506,0.0790513833992095,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",14.63,14.18,443,40,506,0.0790513833992095,0,0,0,"NA","low bq","bad alignment"]
["UPN_Te4_003","X",123195632,"A","T","STAG2","ENST00000218089","missense_variant","Agg/Tgg|p.Arg516Trp/c.1546A>T",949,98,1082,0.0905730129390018,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",15.64,14.22,949,98,1082,0.0905730129390018,0,0,0,"NA","low bq","NA"]
["UPN_Te4_017","X",123195635,"C","A","STAG2","ENST00000218089","missense_variant","Caa/Aaa|p.Gln517Lys/c.1549C>A",405,157,562,0.279359430604982,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",15.66,14.18,405,157,562,0.279359430604982,0,0,0,"NA","low bq","NA"]
["UPN_Te4_004","X",123195641,"A","T","STAG2","ENST00000218089","missense_variant","Agt/Tgt|p.Ser519Cys/c.1555A>T",588,42,692,0.0606936416184971,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",15.17,14.17,588,42,692,0.0606936416184971,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011","X",123195647,"C","A","STAG2","ENST00000218089","missense_variant","Ctg/Atg|p.Leu521Met/c.1561C>A",229,100,610,0.163934426229508,0,0,0,1,0,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",14.37,14,229,100,610,0.163934426229508,0,0,0,"NA","low bq","bad alignment"]
["UPN_Te4_009","X",123195656,"A","T","STAG2","ENST00000218089","missense_variant","Ata/Tta|p.Ile524Leu/c.1570A>T",1128,26,1156,0.0224913494809689,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.52,14,1128,26,1156,0.0224913494809689,0,0,0,"NA","low bq","NA"]
["UPN_Te4_008","X",123195659,"A","T","STAG2","ENST00000218089","missense_variant","Atg/Ttg|p.Met525Leu/c.1573A>T",298,44,344,0.127906976744186,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",18.68,14,298,44,344,0.127906976744186,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011","X",123195674,"A","T","STAG2","ENST00000218089","stop_gained","Aga/Tga|p.Arg530*/c.1588A>T",4524,48,4590,0.0104575163398693,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.41,14.65,542,36,582,0.0618556701030928,3982,12,4008,0.0029940119760479,"low bq","NA"]
["UPN_Te4_016","X",123195677,"C","A","STAG2","ENST00000218089","missense_variant","Caa/Aaa|p.Gln531Lys/c.1591C>A",4061,297,4414,0.0672859084730403,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",16.33,14.15,332,173,506,0.341897233201581,3729,124,3908,0.0317297850562948,"low bq","NA"]
["UPN_Te4_005","X",123195680,"G","T","STAG2","ENST00000218089","missense_variant","Gcg/Tcg|p.Ala532Ser/c.1594G>T",9301,173,9525,0.0181627296587927,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",18.5,14.5,1050,1,1097,0.000911577028258888,8251,172,8428,0.0204081632653061,"low bq","NA"]
["UPN_Te4_022","X",123195683,"G","T","STAG2","ENST00000218089","missense_variant","Gct/Tct|p.Ala533Ser/c.1597G>T",341,44,385,0.114285714285714,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",16.9,14,141,0,141,0,200,44,244,0.180327868852459,"low bq","NA"]
["UPN_Te4_016","X",123195686,"G","T","STAG2","ENST00000218089","stop_gained","Gaa/Taa|p.Glu534*/c.1600G>T",4416,153,4581,0.0333988212180747,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",16.87,14.08,397,70,476,0.147058823529412,4019,83,4105,0.0202192448233861,"low bq","NA"]
["UPN_Te4_012","X",123195692,"C","A","STAG2","ENST00000218089","missense_variant","Cat/Aat|p.His536Asn/c.1606C>A",513,119,639,0.18622848200313,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",15.65,14.26,100,110,210,0.523809523809524,413,9,429,0.020979020979021,"low bq","NA"]
["UPN_Te4_003","X",123195696,"C","A","STAG2","ENST00000218089","missense_variant","cCt/cAt|p.Pro537His/c.1610C>A",7133,323,7516,0.0429749866950506,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.53,14.33,578,138,716,0.192737430167598,6555,185,6800,0.0272058823529412,"low bq","NA"]
["UPN_Te4_003","X",123195699,"C","A","STAG2","ENST00000218089","missense_variant","cCc/cAc|p.Pro538His/c.1613C>A",6376,523,7524,0.0695108984582669,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",17.91,14.07,713,2,715,0.0027972027972028,5663,521,6809,0.0765163753855192,"low bq","NA"]
["UPN_Te4_009","X",123195699,"C","T","STAG2","ENST00000218089","missense_variant","cCc/cTc|p.Pro538Leu/c.1613C>T",4423,242,4947,0.0489185364867597,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.78,14.38,1067,2,1074,0.00186219739292365,3356,240,3873,0.0619674670797831,"low bq","NA"]
["UPN_Te4_008","X",123195708,"G","T","STAG2","ENST00000218089","missense_variant","aGa/aTa|p.Arg541Ile/c.1622G>T",2889,57,2949,0.0193285859613428,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.19,14,283,12,296,0.0405405405405405,2606,45,2653,0.0169619298906898,"low bq","NA"]
["UPN_Te4_018","X",123195710,"G","T","STAG2","ENST00000218089","missense_variant","Ggg/Tgg|p.Gly542Trp/c.1624G>T",7316,1102,8428,0.130754627432368,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",18.45,14.12,1002,0,1005,0,6314,1102,7423,0.14845749696888,"low bq","NA"]
["UPN_Te4_019","X",123195714,"C","A","STAG2","ENST00000218089","missense_variant","aCa/aAa|p.Thr543Lys/c.1628C>A",138,30,187,0.160427807486631,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",14.36,14.43,37,17,54,0.314814814814815,101,13,133,0.0977443609022556,"low bq","bad alignment"]
["UPN_Te4_003","X",123195719,"A","T","STAG2","ENST00000218089","stop_gained","Aaa/Taa|p.Lys545*/c.1633A>T",7564,162,7753,0.0208951373661808,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.51,14.49,630,0,634,0,6934,162,7119,0.02275600505689,"low bq","NA"]
["UPN_Te4_006","X",123195720,"A","T","STAG2","ENST00000218089","missense_variant","aAa/aTa|p.Lys545Ile/c.1634A>T",12288,231,12571,0.0183756264418105,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.03,14.7,904,1,907,0.00110253583241455,11384,230,11664,0.019718792866941,"low bq","NA"]
["UPN_Te4_007","X",123195724,"G","T","STAG2","ENST00000218089","missense_variant","agG/agT|p.Arg546Ser/c.1638G>T",4652,903,5560,0.162410071942446,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",18.69,14.23,139,1,140,0.00714285714285714,4513,902,5420,0.166420664206642,"low bq","NA"]
["UPN_Te4_015","X",123197756,"A","T","STAG2","ENST00000218089","missense_variant","gAt/gTt|p.Asp627Val/c.1880A>T",6033,310,6369,0.0486732611084943,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.21,16.72,3206,7,3226,0.00216986980781153,2827,303,3143,0.0964047088768692,"low bq","NA"]
["UPN_Te4_022","X",123200029,"C","A","STAG2","ENST00000218089","missense_variant","Cat/Aat|p.His701Asn/c.2101C>A",444,25,471,0.0530785562632696,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",14.26,14,25,9,34,0.264705882352941,419,16,437,0.0366132723112128,"low bq","bad alignment"]
["UPN_Te4_003","X",123200035,"C","A","STAG2","ENST00000218089","missense_variant","Ctt/Att|p.Leu703Ile/c.2107C>A",4023,210,4269,0.0491918482080112,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",18.02,14.28,99,68,193,0.352331606217617,3924,142,4076,0.034838076545633,"low bq","NA"]
["UPN_Te4_006","X",123200039,"C","A","STAG2","ENST00000218089","stop_gained","tCa/tAa|p.Ser704*/c.2111C>A",4720,236,4972,0.0474658085277554,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",16.59,14.46,37,162,200,0.81,4683,74,4772,0.0155071248952221,"low bq","NA"]
["UPN_Te4_018","X",123200045,"G","T","STAG2","ENST00000218089","missense_variant","tGg/tTg|p.Trp706Leu/c.2117G>T",7585,1130,8758,0.129024891527746,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",18.45,14.31,364,4,368,0.0108695652173913,7221,1126,8390,0.134207389749702,"low bq","NA"]
["UPN_Te4_008","X",123200047,"G","T","STAG2","ENST00000218089","missense_variant","Gat/Tat|p.Asp707Tyr/c.2119G>T",6104,633,6743,0.0938751297641999,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.41,14.26,270,10,281,0.0355871886120996,5834,623,6462,0.0964097802537914,"low bq","NA"]
["UPN_Te4_014","X",123200057,"C","A","STAG2","ENST00000218089","missense_variant","gCt/gAt|p.Ala710Asp/c.2129C>A",5186,105,5330,0.0196998123827392,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.77,14.68,7,6,32,0.1875,5179,99,5298,0.0186862967157418,"low bq","NA"]
["UPN_Te4_002","X",123200084,"G","T","STAG2","ENST00000218089","missense_variant","gGa/gTa|p.Gly719Val/c.2156G>T",26435,288,26761,0.010761929673779,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.14,15.19,21134,15,21184,0.000708081570996979,5301,273,5577,0.048951048951049,"low bq","NA"]
["UPN_Te4_018","X",123205003,"T","A","STAG2","ENST00000218089","missense_variant","tTc/tAc|p.Phe788Tyr/c.2363T>A",21171,605,22171,0.0272878986062875,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.08,15.68,21171,605,22171,0.0272878986062875,0,0,0,"NA","low bq","NA"]
["UPN_Te4_018","X",123205006,"C","A","STAG2","ENST00000218089","missense_variant","aCt/aAt|p.Thr789Asn/c.2366C>A",19881,1980,21973,0.0901105902698767,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.41,14.16,19881,1980,21973,0.0901105902698767,0,0,0,"NA","low bq","NA"]
["UPN_Te4_019","X",123205011,"C","A","STAG2","ENST00000218089","missense_variant","Ctg/Atg|p.Leu791Met/c.2371C>A",3275,242,3818,0.0633839706652698,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",15.43,14.03,3275,242,3818,0.0633839706652698,0,0,0,"NA","low bq","NA"]
["UPN_Te4_017","X",123205017,"G","T","STAG2","ENST00000218089","missense_variant","Gat/Tat|p.Asp793Tyr/c.2377G>T",8891,501,9417,0.0532016565785282,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.04,14.39,8891,501,9417,0.0532016565785282,0,0,0,"NA","low bq","NA"]
["UPN_Te4_015","X",123205018,"A","T","STAG2","ENST00000218089","missense_variant","gAt/gTt|p.Asp793Val/c.2378A>T",12117,212,12384,0.0171188630490956,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.98,16.08,12117,212,12384,0.0171188630490956,0,0,0,"NA","low bq","NA"]
["UPN_Te4_011","X",123205025,"G","T","STAG2","ENST00000218089","missense_variant","ttG/ttT|p.Leu795Phe/c.2385G>T",9615,1651,11318,0.145873829298463,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.18,14.87,9615,1651,11318,0.145873829298463,0,0,0,"NA","low bq","NA"]
["UPN_Te4_022","X",123205031,"C","G","STAG2","ENST00000218089","missense_variant","atC/atG|p.Ile797Met/c.2391C>G",5067,248,6295,0.0393963463065925,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",16.05,14,5067,248,6295,0.0393963463065925,0,0,0,"NA","low bq","NA"]
["UPN_Te4_021","X",123205034,"C","A","STAG2","ENST00000218089","missense_variant","ttC/ttA|p.Phe798Leu/c.2394C>A",4035,817,4861,0.168072413083728,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.5,14.3,4035,817,4861,0.168072413083728,0,0,0,"NA","low bq","NA"]
["UPN_Te4_017","X",123205038,"C","A","STAG2","ENST00000218089","missense_variant","Cat/Aat|p.His800Asn/c.2398C>A",7597,1307,8917,0.146573959851968,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.04,14.19,7589,1306,8908,0.146609788953749,8,1,9,0.111111111111111,"low bq","NA"]
["UPN_Te4_009","X",123205043,"G","T","STAG2","ENST00000218089","missense_variant","caG/caT|p.Gln801His/c.2403G>T",18629,765,19470,0.039291217257319,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",22.87,14.3,8273,689,9031,0.0762927693500166,10356,76,10439,0.00728039084203468,"low bq","NA"]
["UPN_Te4_011","X",123205049,"G","T","STAG2","ENST00000218089","missense_variant","atG/atT|p.Met803Ile/c.2409G>T",22624,860,23538,0.0365366641175971,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.46,14.42,10178,769,10977,0.0700555707388175,12446,91,12561,0.00724464612690072,"low bq","NA"]
["UPN_Te4_021","X",123205056,"G","T","STAG2","ENST00000218089","missense_variant","Ggg/Tgg|p.Gly806Trp/c.2416G>T",9640,546,10215,0.0534508076358297,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.04,14.05,4801,11,4827,0.00227884814584628,4839,535,5388,0.0992947290274684,"low bq","NA"]
["UPN_Te4_018","X",123205059,"C","G","STAG2","ENST00000218089","missense_variant","Cgt/Ggt|p.Arg807Gly/c.2419C>G",43076,651,44722,0.0145565940700326,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",22.92,14.05,19913,617,20807,0.0296534820012496,23163,34,23915,0.00142170186075685,"low bq","NA"]
["UPN_Te4_002","X",123205064,"C","A","STAG2","ENST00000218089","missense_variant","gaC/gaA|p.Asp808Glu/c.2424C>A",41410,2959,44665,0.0662487406246502,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.43,14.23,17765,2696,20503,0.13149295225089,23645,263,24162,0.010884860524791,"low bq","NA"]
["UPN_Te4_010","X",123205071,"G","T","STAG2","ENST00000218089","stop_gained","Gag/Tag|p.Glu811*/c.2431G>T",29994,545,30602,0.0178092935102281,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.79,14.23,13551,457,14057,0.032510492992815,16443,88,16545,0.00531882744031429,"low bq","NA"]
["UPN_Te4_016","X",123205071,"G","T","STAG2","ENST00000218089","stop_gained","Gag/Tag|p.Glu811*/c.2431G>T",33264,829,34203,0.0242376399731018,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.44,14.83,14864,711,15665,0.0453878072135334,18400,118,18538,0.00636530370050707,"low bq","NA"]
["UPN_Te4_018","X",123205079,"A","T","STAG2","ENST00000218089","missense_variant","ttA/ttT|p.Leu813Phe/c.2439A>T",42303,1983,44378,0.0446843030330344,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.4,14.92,18555,1709,20303,0.0841747524996306,23748,274,24075,0.0113811007268951,"low bq","NA"]
["UPN_Te4_017","X",123205085,"T","A","STAG2","ENST00000218089","stop_gained","taT/taA|p.Tyr815*/c.2445T>A",18602,268,18895,0.0141836464673194,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.73,15.21,8284,258,8553,0.0301648544370396,10318,10,10342,0.000966930961129375,"low bq","NA"]
["UPN_Te4_019","X",123205089,"C","T","STAG2","ENST00000218089","missense_variant","Cct/Tct|p.Pro817Ser/c.2449C>T",7089,145,7418,0.0195470477217579,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.3,14.79,3233,3,3304,0.000907990314769976,3856,142,4114,0.0345162858531842,"low bq","NA"]
["UPN_Te4_022","X",123205096,"C","T","STAG2","ENST00000218089","missense_variant","tCt/tTt|p.Ser819Phe/c.2456C>T",10547,208,12614,0.0164896147138101,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.45,15,3781,46,5439,0.0084574370288656,6766,162,7175,0.0225783972125436,"low bq","NA"]
["UPN_Te4_020","X",123205104,"C","A","STAG2","ENST00000218089","missense_variant","Cag/Aag|p.Gln822Lys/c.2464C>A",7918,229,8206,0.0279064099439435,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.22,14.21,3322,185,3512,0.0526765375854214,4596,44,4694,0.00937366851299531,"low bq","NA"]
["UPN_Te4_010","X",123205108,"C","A","STAG2","ENST00000218089","missense_variant","tCt/tAt|p.Ser823Tyr/c.2468C>A",19533,1412,21308,0.0662661911019335,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.1,14.28,2972,1347,4643,0.290114150333836,16561,65,16665,0.0039003900390039,"low bq","NA"]
["UPN_Te4_016","X",123205120,"G","T","STAG2","ENST00000218089","missense_variant","aGc/aTc|p.Ser827Ile/c.2480G>T",18630,210,18866,0.0111311353758083,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.32,14.96,0,0,0,"NA",18630,210,18866,0.0111311353758083,"low bq","NA"]
["UPN_Te4_003","X",123210254,"G","T","STAG2","ENST00000218089","missense_variant","tGt/tTt|p.Cys869Phe/c.2606G>T",12772,234,13027,0.0179626928686574,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.49,15.03,6568,7,6587,0.00106269925611052,6204,227,6440,0.0352484472049689,"low bq","NA"]
["UPN_Te4_011","X",123217288,"C","A","STAG2","ENST00000218089","missense_variant","gCt/gAt|p.Ala981Asp/c.2942C>A",12327,150,12516,0.0119846596356663,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.67,14.91,6241,102,6355,0.0160503540519276,6086,48,6161,0.0077909430287291,"low bq","NA"]
["UPN_Te4_014","X",123217315,"A","T","STAG2","ENST00000218089","missense_variant","gAg/gTg|p.Glu990Val/c.2969A>T",10233,150,10424,0.0143898695318496,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.62,16.07,5093,127,5246,0.0242089210827297,5140,23,5178,0.00444186944766319,"low bq","NA"]
["UPN_Te4_012","X",123217338,"G","T","STAG2","ENST00000218089","missense_variant","Gca/Tca|p.Ala998Ser/c.2992G>T",4133,80,4223,0.0189438787591759,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.23,14.34,0,0,0,"NA",4133,80,4223,0.0189438787591759,"low bq","NA"]
["UPN_Te4_001","X",123217373,"A","T","STAG2","ENST00000218089","missense_variant","aaA/aaT|p.Lys1009Asn/c.3027A>T",4634,49,4707,0.0104100276184406,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.09,17.27,0,0,0,"NA",4634,49,4707,0.0104100276184406,"low bq","NA"]
["UPN_Te4_018","X",129139290,"A","T","BCORL1","ENST00000540052","missense_variant","gAg/gTg|p.Glu28Val/c.83A>T",34315,4695,39454,0.118999341004714,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28,15.32,20128,43,20240,0.00212450592885375,14187,4652,19214,0.242115124388467,"low bq","NA"]
["UPN_Te4_021","X",129147358,"T","G","BCORL1","ENST00000540052","missense_variant","Tgt/Ggt|p.Cys204Gly/c.610T>G",11104,135,11477,0.0117626557462752,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",16.61,14.1,11103,135,11476,0.0117636807249913,1,0,1,0,"low bq","NA"]
["UPN_Te4_007","X",129147373,"G","C","BCORL1","ENST00000540052","missense_variant","Ggt/Cgt|p.Gly209Arg/c.625G>C",59,565,8912,0.0633976660682226,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.85,15,11,533,1625,0.328,48,32,7287,0.00439138191299575,"low bq","NA"]
["UPN_Te4_001","X",129147380,"C","G","BCORL1","ENST00000540052","missense_variant","gCc/gGc|p.Ala211Gly/c.632C>G",7604,140,7781,0.0179925459452513,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.36,14.05,1802,116,1922,0.0603537981269511,5802,24,5859,0.00409626216077829,"low bq","NA"]
["UPN_Te4_017","X",129147386,"T","G","BCORL1","ENST00000540052","missense_variant","gTg/gGg|p.Val213Gly/c.638T>G",7902,143,8123,0.0176043333743691,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.67,14.55,2612,59,2688,0.0219494047619048,5290,84,5435,0.0154553817847286,"low bq","NA"]
["UPN_Te4_009","X",129147392,"A","C","BCORL1","ENST00000540052","missense_variant","cAc/cCc|p.His215Pro/c.644A>C",5793,161,6013,0.0267753201396973,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.9,15.28,355,146,505,0.289108910891089,5438,15,5508,0.00272331154684096,"low bq","NA"]
["UPN_Te4_014","X",129147394,"T","G","BCORL1","ENST00000540052","missense_variant","Tct/Gct|p.Ser216Ala/c.646T>G",7871,281,8464,0.0331994328922495,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.82,14.19,655,254,1185,0.214345991561181,7216,27,7279,0.00370930072812199,"low bq","NA"]
["UPN_Te4_001","X",129147404,"A","C","BCORL1","ENST00000540052","missense_variant","gAt/gCt|p.Asp219Ala/c.656A>C",6585,122,6794,0.0179570209007948,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.2,14.6,804,73,901,0.0810210876803552,5781,49,5893,0.0083149499406075,"low bq","NA"]
["UPN_Te4_014","X",129147413,"A","C","BCORL1","ENST00000540052","missense_variant","cAg/cCg|p.Gln222Pro/c.665A>C",7923,108,8128,0.0132874015748032,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.9,14.54,749,74,827,0.0894800483675937,7174,34,7301,0.00465689631557321,"low bq","NA"]
["UPN_Te4_010","X",129147416,"T","G","BCORL1","ENST00000540052","missense_variant","gTt/gGt|p.Val223Gly/c.668T>G",7066,142,7280,0.0195054945054945,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",22.32,14.18,363,76,440,0.172727272727273,6703,66,6840,0.00964912280701754,"low bq","NA"]
["UPN_Te4_022","X",129147422,"T","A","BCORL1","ENST00000540052","missense_variant","cTc/cAc|p.Leu225His/c.674T>A",5175,170,5750,0.0295652173913043,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.04,14.24,438,167,969,0.17234262125903,4737,3,4781,0.000627483790002092,"low bq","NA"]
["UPN_Te4_021","X",129147446,"A","C","BCORL1","ENST00000540052","missense_variant","cAt/cCt|p.His233Pro/c.698A>C",19306,818,20213,0.0404690050957305,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.97,18.38,6726,776,7516,0.103246407663651,12580,42,12697,0.00330786800031504,"low bq","NA"]
["UPN_Te4_012","X",129147506,"C","A","BCORL1","ENST00000540052","missense_variant","gCa/gAa|p.Ala253Glu/c.758C>A",8469,182,8705,0.0209075244112579,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.39,14,2510,181,2693,0.0672112885258077,5959,1,6012,0.000166333998669328,"low bq","NA"]
["UPN_Te4_022","X",129147524,"C","A","BCORL1","ENST00000540052","missense_variant","gCt/gAt|p.Ala259Asp/c.776C>A",3298,36,3339,0.0107816711590297,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.25,14,1615,36,1653,0.0217785843920145,1683,0,1686,0,"low bq","NA"]
["UPN_Te4_011","X",129147544,"C","A","BCORL1","ENST00000540052","missense_variant","Ccc/Acc|p.Pro266Thr/c.796C>A",8272,189,8537,0.0221389246808012,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.57,14.28,3939,184,4161,0.0442201393895698,4333,5,4376,0.00114259597806216,"low bq","NA"]
["UPN_Te4_016","X",129147554,"T","A","BCORL1","ENST00000540052","missense_variant","aTc/aAc|p.Ile269Asn/c.806T>A",12468,197,12756,0.0154437127626215,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.64,16.39,5953,184,6166,0.0298410638987999,6515,13,6590,0.00197268588770865,"low bq","NA"]
["UPN_Te4_022","X",129147560,"A","C","BCORL1","ENST00000540052","missense_variant","gAc/gCc|p.Asp271Ala/c.812A>C",3271,47,3333,0.0141014101410141,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.27,15.49,1613,14,1631,0.00858369098712446,1658,33,1702,0.0193889541715629,"low bq","NA"]
["UPN_Te4_002","X",129147566,"A","C","BCORL1","ENST00000540052","missense_variant","aAc/aCc|p.Asn273Thr/c.818A>C",5059,96,5281,0.0181783753077069,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",23.03,14.3,2466,26,2562,0.0101483216237315,2593,70,2719,0.0257447591026113,"low bq","NA"]
["UPN_Te4_021","X",129147574,"T","A","BCORL1","ENST00000540052","missense_variant","Tct/Act|p.Ser276Thr/c.826T>A",10533,149,10833,0.0137542693621342,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.8,15.85,5108,140,5269,0.0265705067375214,5425,9,5564,0.00161754133716751,"low bq","NA"]
["UPN_Te4_009","X",129147581,"C","A","BCORL1","ENST00000540052","stop_gained","tCg/tAg|p.Ser278*/c.833C>A",2270,32,2304,0.0138888888888889,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.53,14,1074,30,1105,0.0271493212669683,1196,2,1199,0.00166805671392827,"low bq","NA"]
["UPN_Te4_021","X",129147596,"T","G","BCORL1","ENST00000540052","missense_variant","gTg/gGg|p.Val283Gly/c.848T>G",8160,203,8505,0.0238683127572016,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.77,14.32,2888,1,2907,0.000343997248022016,5272,202,5598,0.0360843158270811,"low bq","NA"]
["UPN_Te4_009","X",129147688,"T","A","BCORL1","ENST00000540052","missense_variant","Ttg/Atg|p.Leu314Met/c.940T>A",2386,51,2470,0.0206477732793522,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",25.72,15.65,1176,44,1245,0.0353413654618474,1210,7,1225,0.00571428571428571,"low bq","NA"]
["UPN_Te4_009","X",129147701,"A","C","BCORL1","ENST00000540052","missense_variant","cAg/cCg|p.Gln318Pro/c.953A>C",2378,41,2444,0.0167757774140753,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.3,14,1193,33,1229,0.0268510984540277,1185,8,1215,0.0065843621399177,"low bq","NA"]
["UPN_Te4_003","X",129147730,"T","G","BCORL1","ENST00000540052","missense_variant","Ttg/Gtg|p.Leu328Val/c.982T>G",4145,88,4379,0.0200959123087463,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.35,14,2089,86,2307,0.0372778500216732,2056,2,2072,0.000965250965250965,"low bq","NA"]
["UPN_Te4_007","X",129147751,"A","T","BCORL1","ENST00000540052","missense_variant","Act/Tct|p.Thr335Ser/c.1003A>T",1702,24,1737,0.0138169257340242,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.66,16.12,218,0,225,0,1484,24,1512,0.0158730158730159,"low bq","NA"]
["UPN_Te4_008","X",129147819,"G","T","BCORL1","ENST00000540052","missense_variant","atG/atT|p.Met357Ile/c.1071G>T",1903,21,1925,0.0109090909090909,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.44,14.33,812,21,833,0.0252100840336134,1091,0,1092,0,"low bq","NA"]
["UPN_Te4_016","X",129147829,"A","C","BCORL1","ENST00000540052","missense_variant","Acc/Ccc|p.Thr361Pro/c.1081A>C",3242,81,3337,0.0242732993706922,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.12,14.6,1257,27,1285,0.021011673151751,1985,54,2052,0.0263157894736842,"low bq","NA"]
["UPN_Te4_015","X",129147853,"A","C","BCORL1","ENST00000540052","missense_variant","Acc/Ccc|p.Thr369Pro/c.1105A>C",1455,26,1486,0.0174966352624495,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.92,14.96,127,0,128,0,1328,26,1358,0.0191458026509573,"low bq","NA"]
["UPN_Te4_005","X",129147901,"A","C","BCORL1","ENST00000540052","missense_variant","Acc/Ccc|p.Thr385Pro/c.1153A>C",8319,838,9192,0.0911662315056571,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",16.49,14.48,8058,838,8931,0.0938304781099541,261,0,261,0,"low bq","NA"]
["UPN_Te4_014","X",129147914,"T","A","BCORL1","ENST00000540052","missense_variant","aTc/aAc|p.Ile389Asn/c.1166T>A",5209,223,5568,0.0400502873563218,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.05,14.75,4172,217,4522,0.0479876160990712,1037,6,1046,0.00573613766730402,"low bq","NA"]
["UPN_Te4_004","X",129147920,"C","A","BCORL1","ENST00000540052","missense_variant","aCt/aAt|p.Thr391Asn/c.1172C>A",5181,643,5839,0.110121596163727,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",19.19,14.16,5001,643,5659,0.113624315250044,180,0,180,0,"low bq","NA"]
["UPN_Te4_017","X",129147925,"G","C","BCORL1","ENST00000540052","missense_variant","Gcc/Ccc|p.Ala393Pro/c.1177G>C",3770,108,3889,0.0277706351247107,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",22.42,14,3173,108,3291,0.03281677301732,597,0,598,0,"low bq","NA"]
["UPN_Te4_014","X",129147938,"T","A","BCORL1","ENST00000540052","missense_variant","aTg/aAg|p.Met397Lys/c.1190T>A",3890,1363,5271,0.258584708783912,0,0,0,0,1,1,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",20.86,14.99,2853,1355,4224,0.320785984848485,1037,8,1047,0.00764087870105062,"low bq","NA"]
["UPN_Te4_006","X",129147964,"C","A","BCORL1","ENST00000540052","missense_variant","Ccc/Acc|p.Pro406Thr/c.1216C>A",16676,883,17751,0.0497436764125965,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.98,14,6603,879,7623,0.115308933490752,10073,4,10128,0.000394944707740916,"low bq","NA"]
["UPN_Te4_019","X",129147970,"T","A","BCORL1","ENST00000540052","missense_variant","Tct/Act|p.Ser408Thr/c.1222T>A",2248,115,2483,0.0463149416028997,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.95,14,941,115,1166,0.0986277873070326,1307,0,1317,0,"low bq","NA"]
["UPN_Te4_022","X",129147970,"T","G","BCORL1","ENST00000540052","missense_variant","Tct/Gct|p.Ser408Ala/c.1222T>G",4702,253,5173,0.0489077904504156,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",24.78,14.14,1975,248,2436,0.101806239737274,2727,5,2737,0.00182681768359518,"low bq","NA"]
["UPN_Te4_015","X",129147991,"T","A","BCORL1","ENST00000540052","missense_variant","Ttc/Atc|p.Phe415Ile/c.1243T>A",8403,606,12062,0.0502404244735533,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.86,14.37,1682,590,5295,0.111425873465534,6721,16,6767,0.00236441554603222,"low bq","NA"]
["UPN_Te4_022","X",129147991,"T","G","BCORL1","ENST00000540052","missense_variant","Ttc/Gtc|p.Phe415Val/c.1243T>G",4142,801,5163,0.15514235909355,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.59,14.04,1419,801,2427,0.330037082818294,2723,0,2736,0,"low bq","NA"]
["UPN_Te4_002","X",129148002,"T","G","BCORL1","ENST00000540052","missense_variant","agT/agG|p.Ser418Arg/c.1254T>G",16732,433,17229,0.0251320448081723,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.64,14.28,6894,426,7354,0.0579276584171879,9838,7,9875,0.000708860759493671,"low bq","NA"]
["UPN_Te4_001","X",129148011,"C","G","BCORL1","ENST00000540052","missense_variant","tgC/tgG|p.Cys421Trp/c.1263C>G",7480,181,7676,0.0235799895779052,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.46,14,3134,181,3324,0.0544524669073406,4346,0,4352,0,"low bq","NA"]
["UPN_Te4_020","X",129148015,"C","A","BCORL1","ENST00000540052","missense_variant","Cct/Act|p.Pro423Thr/c.1267C>A",6828,326,7223,0.0451336009968157,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.5,14.12,2989,324,3373,0.0960569226208123,3839,2,3850,0.000519480519480519,"low bq","NA"]
["UPN_Te4_004","X",129148025,"A","C","BCORL1","ENST00000540052","missense_variant","cAg/cCg|p.Gln426Pro/c.1277A>C",11305,240,11596,0.0206967919972404,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.15,14.28,4560,237,4809,0.0492825951341235,6745,3,6787,0.00044202151171357,"low bq","NA"]
["UPN_Te4_014","X",129148464,"T","A","BCORL1","ENST00000540052","missense_variant","agT/agA|p.Ser572Arg/c.1716T>A",12692,135,12874,0.0104862513593289,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.04,16.99,6238,124,6380,0.019435736677116,6454,11,6494,0.0016938712657838,"low bq","NA"]
["UPN_Te4_003","X",129148775,"T","A","BCORL1","ENST00000540052","missense_variant","gTc/gAc|p.Val676Asp/c.2027T>A",3722,38,3780,0.0100529100529101,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.66,18.39,1829,32,1872,0.0170940170940171,1893,6,1908,0.00314465408805031,"low bq","NA"]
["UPN_Te4_022","X",129148795,"A","C","BCORL1","ENST00000540052","missense_variant","Act/Cct|p.Thr683Pro/c.2047A>C",5507,157,5685,0.0276165347405453,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.15,14.13,2624,157,2792,0.0562320916905444,2883,0,2893,0,"low bq","NA"]
["UPN_Te4_003","X",129149584,"A","T","BCORL1","ENST00000540052","missense_variant","Atg/Ttg|p.Met946Leu/c.2836A>T",10536,107,10685,0.0100140383715489,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.53,14.75,0,0,0,"NA",10536,107,10685,0.0100140383715489,"low bq","NA"]
["UPN_Te4_014","X",129149720,"T","A","BCORL1","ENST00000540052","missense_variant","aTg/aAg|p.Met991Lys/c.2972T>A",17365,182,17669,0.010300526345577,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.4,16.84,8554,141,8757,0.0161014045906132,8811,41,8912,0.00460053859964093,"low bq","NA"]
["UPN_Te4_011","X",129150164,"T","A","BCORL1","ENST00000540052","missense_variant","gTg/gAg|p.Val1139Glu/c.3416T>A",16428,182,16682,0.0109099628341925,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.54,16.9,8017,169,8211,0.020582145901839,8411,13,8471,0.00153464762129619,"low bq","NA"]
["UPN_Te4_016","X",129156920,"T","G","BCORL1","ENST00000540052","missense_variant","gTg/gGg|p.Val1219Gly/c.3656T>G",53734,2437,56550,0.0430946065428824,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.81,15.49,28534,18,28780,0.000625434329395414,25200,2419,27770,0.0871083903492978,"low bq","NA"]
["UPN_Te4_011","X",129162820,"T","A","BCORL1","ENST00000540052","missense_variant","gTc/gAc|p.Val1430Asp/c.4289T>A",5424,66,5521,0.0119543560949103,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.29,17.23,5420,66,5517,0.011963023382273,4,0,4,0,"low bq","NA"]
["UPN_Te4_005","X",129171477,"A","T","BCORL1","ENST00000540052","missense_variant","Aac/Tac|p.Asn1481Tyr/c.4441A>T",13815,147,14000,0.0105,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.83,19.64,0,0,0,"NA",13815,147,14000,0.0105,"low bq","NA"]
["UPN_Te4_013","X",129171483,"A","T","BCORL1","ENST00000540052","missense_variant","Aac/Tac|p.Asn1483Tyr/c.4447A>T",2165,22,2199,0.0100045475216007,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.67,16.64,0,0,0,"NA",2165,22,2199,0.0100045475216007,"low bq","NA"]
["UPN_Te4_011","X",129185955,"T","A","BCORL1","ENST00000540052","missense_variant","cTc/cAc|p.Leu1606His/c.4817T>A",5124,75,5239,0.014315709104791,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.06,16.89,2527,66,2621,0.0251812285387257,2597,9,2618,0.00343773873185638,"low bq","NA"]
["UPN_Te4_005","X",129190092,"T","A","BCORL1","ENST00000540052","missense_variant","tTc/tAc|p.Phe1706Tyr/c.5117T>A",3079,49,3134,0.0156349712827058,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.12,16.24,3079,49,3134,0.0156349712827058,0,0,0,"NA","low bq","NA"]
["UPN_Te4_002","X",129190108,"T","A","BCORL1","ENST00000540052","missense_variant","agT/agA|p.Ser1711Arg/c.5133T>A",2559,38,2618,0.014514896867838,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.67,17.29,2559,38,2618,0.014514896867838,0,0,0,"NA","low bq","NA"]
["UPN_Te4_022","X",133527590,"C","A","PHF6","ENST00000332070","missense_variant","caC/caA|p.His100Gln/c.300C>A",9038,127,9174,0.0138434706780031,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.74,15.6,4741,15,4759,0.00315192267283043,4297,112,4415,0.0253680634201586,"low bq","NA"]
["UPN_Te4_011","X",133527617,"G","T","PHF6","ENST00000332070","missense_variant","ttG/ttT|p.Leu109Phe/c.327G>T",12925,227,13207,0.0171878549254183,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.14,14.48,6747,12,6782,0.00176938956060159,6178,215,6425,0.0334630350194553,"low bq","NA"]
["UPN_Te4_020","X",133527621,"G","T","PHF6","ENST00000332070","missense_variant","Gat/Tat|p.Asp111Tyr/c.331G>T",5326,104,5435,0.0191352345906164,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.59,14.3,2748,1,2752,0.000363372093023256,2578,103,2683,0.0383898620946701,"low bq","NA"]
["UPN_Te4_009","X",133527639,"G","T","PHF6","ENST00000332070","stop_gained","Gag/Tag|p.Glu117*/c.349G>T",3795,133,3951,0.0336623639584915,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",26.47,14.27,0,0,0,"NA",3795,133,3951,0.0336623639584915,"low bq","NA"]
["UPN_Te4_013","X",133527640,"A","T","PHF6","ENST00000332070","missense_variant","gAg/gTg|p.Glu117Val/c.350A>T",3575,53,3654,0.0145046524356869,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.48,14.13,0,0,0,"NA",3575,53,3654,0.0145046524356869,"low bq","NA"]
["UPN_Te4_002","X",133527645,"C","A","PHF6","ENST00000332070","missense_variant","Cct/Act|p.Pro119Thr/c.355C>A",10080,105,10214,0.0102800078323869,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.74,14.55,0,0,0,"NA",10080,105,10214,0.0102800078323869,"low bq","NA"]
["UPN_Te4_014","X",133527654,"G","T","PHF6","ENST00000332070","stop_gained","Gga/Tga|p.Gly122*/c.364G>T",5958,248,6285,0.0394590294351631,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",22.68,14.22,0,0,0,"NA",5958,248,6285,0.0394590294351631,"low bq","NA"]
["UPN_Te4_015","X",133527654,"G","T","PHF6","ENST00000332070","stop_gained","Gga/Tga|p.Gly122*/c.364G>T",6485,280,6842,0.0409237065185618,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",22.56,14.18,0,0,0,"NA",6485,280,6842,0.0409237065185618,"low bq","NA"]
["UPN_Te4_016","X",133527654,"G","T","PHF6","ENST00000332070","stop_gained","Gga/Tga|p.Gly122*/c.364G>T",8057,327,8492,0.0385068299576072,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",22.31,14.09,0,0,0,"NA",8057,327,8492,0.0385068299576072,"low bq","NA"]
["UPN_Te4_017","X",133527654,"G","T","PHF6","ENST00000332070","stop_gained","Gga/Tga|p.Gly122*/c.364G>T",6528,293,6872,0.0426367869615832,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.43,14.26,0,0,0,"NA",6528,293,6872,0.0426367869615832,"low bq","NA"]
["UPN_Te4_018","X",133527654,"G","T","PHF6","ENST00000332070","stop_gained","Gga/Tga|p.Gly122*/c.364G>T",9798,433,10352,0.0418276661514683,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",22.39,14.18,1,0,1,0,9797,433,10351,0.0418317070814414,"low bq","NA"]
["UPN_Te4_019","X",133527654,"G","T","PHF6","ENST00000332070","stop_gained","Gga/Tga|p.Gly122*/c.364G>T",2221,92,2335,0.0394004282655246,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.63,14.14,0,0,0,"NA",2221,92,2335,0.0394004282655246,"low bq","NA"]
["UPN_Te4_020","X",133527654,"G","T","PHF6","ENST00000332070","stop_gained","Gga/Tga|p.Gly122*/c.364G>T",2572,120,2705,0.044362292051756,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.57,14.12,0,0,0,"NA",2572,120,2705,0.044362292051756,"low bq","NA"]
["UPN_Te4_021","X",133527654,"G","T","PHF6","ENST00000332070","stop_gained","Gga/Tga|p.Gly122*/c.364G>T",2958,154,3137,0.0490914886834555,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.54,14.25,0,0,0,"NA",2958,154,3137,0.0490914886834555,"low bq","NA"]
["UPN_Te4_022","X",133527654,"G","T","PHF6","ENST00000332070","stop_gained","Gga/Tga|p.Gly122*/c.364G>T",4395,205,4637,0.044209618287686,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",21.21,14.35,0,0,0,"NA",4395,205,4637,0.044209618287686,"low bq","NA"]
["UPN_Te4_001","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",5361,104,5481,0.0189746396642948,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.91,14.07,1,0,1,0,5360,104,5480,0.018978102189781,"low bq","NA"]
["UPN_Te4_002","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",10005,212,10241,0.0207011034078703,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.42,15.44,0,0,0,"NA",10005,212,10241,0.0207011034078703,"low bq","NA"]
["UPN_Te4_003","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",7247,142,7398,0.0191943768586104,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.23,14.47,0,0,0,"NA",7247,142,7398,0.0191943768586104,"low bq","NA"]
["UPN_Te4_004","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",9156,190,9365,0.0202883075280299,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.28,14.56,40,0,41,0,9116,190,9324,0.0203775203775204,"low bq","NA"]
["UPN_Te4_005","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",11136,249,11403,0.0218363588529334,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.23,14.2,0,0,0,"NA",11136,249,11403,0.0218363588529334,"low bq","NA"]
["UPN_Te4_006","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",9564,175,9765,0.017921146953405,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.14,14.43,0,0,0,"NA",9564,175,9765,0.017921146953405,"low bq","NA"]
["UPN_Te4_007","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",6187,122,6314,0.0193221412733608,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.12,14,0,0,0,"NA",6187,122,6314,0.0193221412733608,"low bq","NA"]
["UPN_Te4_008","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",4306,91,4404,0.0206630336058129,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.17,14.52,2,0,2,0,4304,91,4402,0.0206724216265334,"low bq","NA"]
["UPN_Te4_009","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",3882,93,3982,0.0233550979407333,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.02,14.53,0,0,0,"NA",3882,93,3982,0.0233550979407333,"low bq","NA"]
["UPN_Te4_010","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",6830,124,6960,0.017816091954023,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.99,14.41,0,0,0,"NA",6830,124,6960,0.017816091954023,"low bq","NA"]
["UPN_Te4_011","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",6373,126,6519,0.01932811780948,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.83,14.7,0,0,0,"NA",6373,126,6519,0.01932811780948,"low bq","NA"]
["UPN_Te4_012","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",6158,164,6340,0.0258675078864353,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.8,14.75,0,0,0,"NA",6158,164,6340,0.0258675078864353,"low bq","NA"]
["UPN_Te4_013","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",3613,64,3690,0.0173441734417344,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.95,14.11,0,0,0,"NA",3613,64,3690,0.0173441734417344,"low bq","NA"]
["UPN_Te4_014","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",6154,125,6295,0.0198570293884035,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.02,14.25,1,0,1,0,6153,125,6294,0.0198601843025103,"low bq","NA"]
["UPN_Te4_015","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",6691,131,6845,0.0191380569758948,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",29.07,14.27,0,0,0,"NA",6691,131,6845,0.0191380569758948,"low bq","NA"]
["UPN_Te4_016","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",8338,136,8502,0.0159962361797224,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.95,14.15,0,0,0,"NA",8338,136,8502,0.0159962361797224,"low bq","NA"]
["UPN_Te4_017","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",6672,195,6879,0.028347143480157,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.55,14.14,0,0,0,"NA",6672,195,6879,0.028347143480157,"low bq","NA"]
["UPN_Te4_018","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",10115,226,10362,0.0218104613009072,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",28.84,14.22,1,0,1,0,10114,226,10361,0.021812566354599,"low bq","NA"]
["UPN_Te4_019","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",2271,55,2337,0.0235344458707745,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.62,14.71,0,0,0,"NA",2271,55,2337,0.0235344458707745,"low bq","NA"]
["UPN_Te4_020","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",2632,71,2706,0.0262379896526238,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.37,14.35,0,0,0,"NA",2632,71,2706,0.0262379896526238,"low bq","NA"]
["UPN_Te4_021","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",3044,87,3140,0.0277070063694268,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.26,14,0,0,0,"NA",3044,87,3140,0.0277070063694268,"low bq","NA"]
["UPN_Te4_022","X",133527655,"G","T","PHF6","ENST00000332070","missense_variant","gGa/gTa|p.Gly122Val/c.365G>T",4503,125,4643,0.0269222485461986,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",27.58,14.58,0,0,0,"NA",4503,125,4643,0.0269222485461986,"low bq","NA"]
["UPN_Te4_013","X",133527657,"A","T","PHF6","ENST00000332070","missense_variant","Att/Ttt|p.Ile123Phe/c.367A>T",3653,38,3703,0.0102619497704564,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.39,19.45,0,0,0,"NA",3653,38,3703,0.0102619497704564,"low bq","NA"]
["UPN_Te4_001","X",133527658,"T","A","PHF6","ENST00000332070","missense_variant","aTt/aAt|p.Ile123Asn/c.368T>A",5400,62,5492,0.0112891478514202,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.04,17.35,1,0,1,0,5399,62,5491,0.0112912037880168,"low bq","NA"]
["UPN_Te4_018","X",133527658,"T","A","PHF6","ENST00000332070","missense_variant","aTt/aAt|p.Ile123Asn/c.368T>A",10230,133,10406,0.012781087833942,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.13,16.04,1,0,1,0,10229,133,10405,0.0127823161941374,"low bq","NA"]
["UPN_Te4_001","X",133527661,"A","T","PHF6","ENST00000332070","missense_variant","tAc/tTc|p.Tyr124Phe/c.371A>T",5406,66,5495,0.0120109190172884,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.68,14.27,1,0,1,0,5405,66,5494,0.0120131052056789,"low bq","NA"]
["UPN_Te4_002","X",133527661,"A","T","PHF6","ENST00000332070","missense_variant","tAc/tTc|p.Tyr124Phe/c.371A>T",10112,130,10269,0.0126594605122212,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.29,15.76,0,0,0,"NA",10112,130,10269,0.0126594605122212,"low bq","NA"]
["UPN_Te4_004","X",133527661,"A","T","PHF6","ENST00000332070","missense_variant","tAc/tTc|p.Tyr124Phe/c.371A>T",9287,96,9401,0.0102116796085523,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.09,14.83,41,0,41,0,9246,96,9360,0.0102564102564103,"low bq","NA"]
["UPN_Te4_005","X",133527661,"A","T","PHF6","ENST00000332070","missense_variant","tAc/tTc|p.Tyr124Phe/c.371A>T",11274,129,11426,0.0112900402590583,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.15,15.35,1,0,1,0,11273,129,11425,0.0112910284463895,"low bq","NA"]
["UPN_Te4_006","X",133527661,"A","T","PHF6","ENST00000332070","missense_variant","tAc/tTc|p.Tyr124Phe/c.371A>T",9658,98,9780,0.0100204498977505,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.24,16.04,0,0,0,"NA",9658,98,9780,0.0100204498977505,"low bq","NA"]
["UPN_Te4_007","X",133527661,"A","T","PHF6","ENST00000332070","missense_variant","tAc/tTc|p.Tyr124Phe/c.371A>T",6240,84,6332,0.0132659507264687,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.21,18.67,0,0,0,"NA",6240,84,6332,0.0132659507264687,"low bq","NA"]
["UPN_Te4_008","X",133527661,"A","T","PHF6","ENST00000332070","missense_variant","tAc/tTc|p.Tyr124Phe/c.371A>T",4342,62,4411,0.0140557696667422,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.17,16.53,2,0,2,0,4340,62,4409,0.0140621456112497,"low bq","NA"]
["UPN_Te4_009","X",133527661,"A","T","PHF6","ENST00000332070","missense_variant","tAc/tTc|p.Tyr124Phe/c.371A>T",3933,56,3995,0.014017521902378,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.14,15.73,0,0,0,"NA",3933,56,3995,0.014017521902378,"low bq","NA"]
["UPN_Te4_010","X",133527661,"A","T","PHF6","ENST00000332070","missense_variant","tAc/tTc|p.Tyr124Phe/c.371A>T",6887,82,6982,0.0117444858206818,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.24,14.62,0,0,0,"NA",6887,82,6982,0.0117444858206818,"low bq","NA"]
["UPN_Te4_011","X",133527661,"A","T","PHF6","ENST00000332070","missense_variant","tAc/tTc|p.Tyr124Phe/c.371A>T",6433,102,6547,0.0155796548037269,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.52,16.12,0,0,0,"NA",6433,102,6547,0.0155796548037269,"low bq","NA"]
["UPN_Te4_013","X",133527661,"A","T","PHF6","ENST00000332070","missense_variant","tAc/tTc|p.Tyr124Phe/c.371A>T",3648,48,3705,0.0129554655870445,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.82,16.69,0,0,0,"NA",3648,48,3705,0.0129554655870445,"low bq","NA"]
["UPN_Te4_014","X",133527661,"A","T","PHF6","ENST00000332070","missense_variant","tAc/tTc|p.Tyr124Phe/c.371A>T",6185,105,6320,0.0166139240506329,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.56,15.66,1,0,1,0,6184,105,6319,0.0166165532520968,"low bq","NA"]
["UPN_Te4_015","X",133527661,"A","T","PHF6","ENST00000332070","missense_variant","tAc/tTc|p.Tyr124Phe/c.371A>T",6766,90,6872,0.0130966239813737,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.64,16.38,1,0,1,0,6765,90,6871,0.0130985300538495,"low bq","NA"]
["UPN_Te4_016","X",133527661,"A","T","PHF6","ENST00000332070","missense_variant","tAc/tTc|p.Tyr124Phe/c.371A>T",8396,125,8541,0.0146352886078913,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.61,15.12,0,0,0,"NA",8396,125,8541,0.0146352886078913,"low bq","NA"]
["UPN_Te4_018","X",133527661,"A","T","PHF6","ENST00000332070","missense_variant","tAc/tTc|p.Tyr124Phe/c.371A>T",10239,151,10413,0.0145011043887448,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",32.63,15.19,1,0,1,0,10238,151,10412,0.0145024971187092,"low bq","NA"]
["UPN_Te4_001","X",133547636,"T","A","PHF6","ENST00000332070","missense_variant","gaT/gaA|p.Asp178Glu/c.534T>A",22536,235,22858,0.0102808644675825,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.71,15.98,11196,201,11440,0.0175699300699301,11340,34,11418,0.00297775442284113,"low bq","NA"]
["UPN_Te4_013","X",133547636,"T","A","PHF6","ENST00000332070","missense_variant","gaT/gaA|p.Asp178Glu/c.534T>A",14453,157,14660,0.0107094133697135,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.67,16.58,7189,124,7338,0.0168983374216408,7264,33,7322,0.00450696531002458,"low bq","NA"]
["UPN_Te4_013","X",133547646,"A","T","PHF6","ENST00000332070","missense_variant","Aca/Tca|p.Thr182Ser/c.544A>T",7212,81,7325,0.0110580204778157,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.35,24.23,0,0,0,"NA",7212,81,7325,0.0110580204778157,"low bq","NA"]
["UPN_Te4_011","X",133547967,"A","T","PHF6","ENST00000332070","stop_gained","Aag/Tag|p.Lys234*/c.700A>T",12543,139,12745,0.0109062377402903,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.5,22.37,6363,32,6424,0.0049813200498132,6180,107,6321,0.0169277013130834,"low bq","NA"]
["UPN_Te4_013","X",133547967,"A","T","PHF6","ENST00000332070","stop_gained","Aag/Tag|p.Lys234*/c.700A>T",5654,59,5742,0.0102751654475792,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",33.6,22.95,2861,15,2890,0.00519031141868512,2793,44,2852,0.0154277699859748,"low bq","NA"]
["UPN_Te4_001","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",7202,92,7301,0.0126010135597863,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.4,14.53,7031,6,7044,0.000851788756388416,171,86,257,0.334630350194553,"low bq","NA"]
["UPN_Te4_003","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",10131,115,10256,0.0112129485179407,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.68,14.5,9901,10,9921,0.00100796290696502,230,105,335,0.313432835820896,"low bq","NA"]
["UPN_Te4_004","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",11072,130,11213,0.0115936859002943,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.69,14.63,10853,11,10875,0.00101149425287356,219,119,338,0.35207100591716,"low bq","NA"]
["UPN_Te4_005","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",14807,199,15026,0.0132437109011048,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.61,14.57,14484,21,14524,0.0014458826769485,323,178,502,0.354581673306773,"low bq","NA"]
["UPN_Te4_006","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",13648,174,13834,0.0125777070984531,0,0,0,1,1,0,0,0,2,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.7,15.75,13341,32,13383,0.00239109317791228,307,142,451,0.314855875831486,"low bq","NA"]
["UPN_Te4_007","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",7590,84,7679,0.0109389243391067,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.54,15.35,7381,6,7391,0.000811798132864294,209,78,288,0.270833333333333,"low bq","NA"]
["UPN_Te4_008","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",4162,54,4221,0.0127931769722814,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.64,14.24,4071,5,4081,0.00122518990443519,91,49,140,0.35,"low bq","NA"]
["UPN_Te4_010","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",9208,105,9324,0.0112612612612613,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.72,14.54,9003,9,9023,0.000997450958661199,205,96,301,0.318936877076412,"low bq","NA"]
["UPN_Te4_011","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",7091,121,7227,0.0167427701674277,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.42,15.53,6921,10,6940,0.00144092219020173,170,111,287,0.386759581881533,"low bq","NA"]
["UPN_Te4_012","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",7572,93,7676,0.0121156852527358,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.92,14.87,7455,4,7468,0.000535618639528656,117,89,208,0.427884615384615,"low bq","NA"]
["UPN_Te4_013","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",5316,77,5405,0.0142460684551341,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.45,14.47,5183,6,5197,0.00115451221858765,133,71,208,0.341346153846154,"low bq","NA"]
["UPN_Te4_014","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",7375,113,7502,0.0150626499600107,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.42,14.43,7204,10,7225,0.0013840830449827,171,103,277,0.371841155234657,"low bq","NA"]
["UPN_Te4_015","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",6644,100,6753,0.014808233377758,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.47,14.83,6487,11,6504,0.00169126691266913,157,89,249,0.357429718875502,"low bq","NA"]
["UPN_Te4_016","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",10392,154,10568,0.0145722937168811,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.36,15.3,10143,19,10180,0.0018664047151277,249,135,388,0.347938144329897,"low bq","NA"]
["UPN_Te4_018","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",12205,163,12383,0.0131632076233546,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.43,14.49,11907,11,11929,0.000922122558470953,298,152,454,0.334801762114537,"low bq","NA"]
["UPN_Te4_020","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",3188,39,3229,0.0120780427376897,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.79,14.54,3140,0,3141,0,48,39,88,0.443181818181818,"low bq","NA"]
["UPN_Te4_021","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",3131,34,3169,0.0107289365730514,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.94,14.65,3090,3,3096,0.000968992248062015,41,31,73,0.424657534246575,"low bq","NA"]
["UPN_Te4_022","X",133549091,"G","T","PHF6","ENST00000332070","stop_gained","Gaa/Taa|p.Glu259*/c.775G>T",5333,69,5408,0.012758875739645,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",34.96,14.39,5237,1,5242,0.000190766882869134,96,68,166,0.409638554216867,"low bq","NA"]
["UPN_Te4_001","X",133549092,"A","T","PHF6","ENST00000332070","missense_variant","gAa/gTa|p.Glu259Val/c.776A>T",13645,194,13866,0.0139910572623684,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.15,16.2,7022,8,7044,0.00113571834185122,6623,186,6822,0.0272647317502199,"low bq","NA"]
["UPN_Te4_011","X",133549092,"A","T","PHF6","ENST00000332070","missense_variant","gAa/gTa|p.Glu259Val/c.776A>T",13395,193,13626,0.0141640980478497,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.11,15.45,6917,3,6940,0.000432276657060519,6478,190,6686,0.0284175889919234,"low bq","NA"]
["UPN_Te4_013","X",133549092,"A","T","PHF6","ENST00000332070","missense_variant","gAa/gTa|p.Glu259Val/c.776A>T",9995,174,10201,0.0170571512596804,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.2,19.18,5156,23,5197,0.00442563017125265,4839,151,5004,0.03017585931255,"low bq","NA"]
["UPN_Te4_014","X",133549092,"A","T","PHF6","ENST00000332070","missense_variant","gAa/gTa|p.Glu259Val/c.776A>T",13989,210,14231,0.014756517461879,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",31.12,16.2,7197,10,7225,0.0013840830449827,6792,200,7006,0.0285469597487868,"low bq","NA"]
["UPN_Te4_015","X",133549092,"A","T","PHF6","ENST00000332070","missense_variant","gAa/gTa|p.Glu259Val/c.776A>T",12558,201,12798,0.0157055789967182,0,0,0,0,1,0,0,0,1,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",30.97,15.74,6477,6,6504,0.000922509225092251,6081,195,6294,0.0309818875119161,"low bq","NA"]
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