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["Supplemental Table S1: Type 1 error of association tests performed in European and African data for the different combination of phasing+imputation approaches using the random selection strategy for a=0.05."]
[null,"MAF bin"]
["Method","[0,0.01)",null,"[0.01,0.05)",null,"[0.05,0.1)",null,"[0.1,0.2)",null,"[0.2,0.3)",null,"[0.3,0.4)",null,"[0.4,0.5]"]
[null,"EUR","AFR","EUR","AFR","EUR","AFR","EUR","AFR","EUR","AFR","EUR","AFR","EUR","AFR"]
["Observed genotypes",0.0501648465340844,0.0502342240824211,0.0506026196813147,0.0503430544507703,0.0510182388414705,0.0500544062989045,0.0521033072389832,0.0503785102012673,0.0532292183541824,0.0506059703271167,0.0510028389472877,0.0503902355165893,0.0512529468261591,0.0505484632581852]
["Ped_Pop",0.0533688929762042,0.0509324694140373,0.0504207296521426,0.0503731443331218,0.0510466548091394,0.0510893485915493,0.0518889084352186,0.0506303664617462,0.0524940586560811,0.0507453971280462,0.050817156449014,0.0506945160735774,0.0502903169475247,0.050826351308999]
["GIGI",0.0533454420048281,0.0508998712169994,0.0503271696051882,0.0503403731741251,0.051266615447762,0.0517452807120501,0.050640997449204,0.0508858517749697,0.0510080697814108,0.0508991241136865,0.0495219826594031,0.0521282447997249,0.0493407840740417,0.0509015691272644]
["Merlin",0.0561347281296701,0.050361397295557,0.0531816227147523,0.0494731291392208,0.0519222875906417,0.0502787558685446,0.0506289031577096,0.0502173802594047,0.0496291556762686,0.0506977298456772,0.0483158137036753,0.0514337287261475,0.0481074827556099,0.0500052234596018]
["MaCH+minimac",0.0378195194849983,0.0399589504185448,0.0506032007996188,0.0490807689901418,0.0514108001726007,0.0492114143192488,0.0523979681590289,0.050141170151767,0.0533088715363924,0.0505928618244652,0.0516089925573544,0.0497232250300842,0.0519601851043395,0.0508806752888573]
["SHAPEIT+minimac",0.0375652373836073,0.0408986638763683,0.0505927406701456,0.0501255731228829,0.0506804045591841,0.0505037167449139,0.0519328876770164,0.0503828650645608,0.0525097281345486,0.0513197878805935,0.0510565487608379,0.0506291903042806,0.0513970138828255,0.0509496249556006]
["duoHMM+minimac",0.037499942522129,0.0407075016097875,0.0507025720296138,0.0503606317087776,0.0508266941705169,0.0505966353677621,0.0519768669188143,0.0502086705328175,0.0525880755268862,0.0509873085860692,0.0510151154760991,0.0505587072374076,0.0510084693966646,0.0507427759553708]
["IMPUTE+IMPUTE",0.0371366823772847,0.0408077108821636,0.0511267883915808,0.0500650954385526,0.0516286559247293,0.0501137030516432,0.0522880200545343,0.0502297190387365,0.053311483116137,0.0509444080319371,0.0515046420624568,0.0504349320955819,0.0517942897057539,0.0506863625916717]
["SHAPEIT+IMPUTE",0.0378296355902977,0.0411369124275596,0.0505741448844156,0.0505679837693387,0.0504278181799046,0.050455423513302,0.0518042483947577,0.0499677014305726,0.052044866940012,0.0507632723589346,0.0512529732218215,0.0509265944645006,0.0509757268837859,0.0501535697122918]
["duoHMM+IMPUTE",0.037865501781814,0.0410105441081777,0.0507008286747016,0.0507059205567522,0.0504467621583506,0.0505128863458529,0.0519680710704547,0.0500627826124825,0.0522603222689405,0.0508347732824882,0.0513511854523134,0.0505312016503352,0.0507836374748974,0.0501619272476547]
["Beagle+Beagle",0.0365053454420048,0.0399271571152608,0.0506421357259911,0.0499941905672688,0.051247671469316,0.0503246038732394,0.0521516844049609,0.0506877054951117,0.0527839440077303,0.0505726032294584,0.0516611678048032,0.0505208870551831,0.0516218458045927,0.05091828419799]