#NEXUS [written Fri Dec 14 11:44:14 MST 2018 by Mesquite version 3.51 (build 898) at AZFS-ALEE/10.170.40.34] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=155; TAXLABELS Tachycineta_bicolor Progne_subis Hirundo_rustica Piranga_olivacea Quiscalus_quiscula Quiscalus_major Junco_hyemalis Parula_americana Geothlypis_trichas Coccothraustes_vespertinus Hylocichla_mustelina Catharus_ustulatus Turdus_migratorius Cyanocitta_cristata Corvus_corax Lanius_ludovicianus Vireo_flavifrons Myiopsitta_monachus Psittacus_erithacus Cacatua_galerita Nymphicus_hollandicus Selenidera_spectabilis Colaptes_auratus Dryocopus_pileatus Sphyrapicus_varius Megaceryle_alcyon Coracias_abyssinica Trogon_collaris Trogon_viridis Trogon_violaceus Coccyzus_americanus Crotophaga_ani Geococcyx_californianus Archilochus_colubris Calypte_anna Caprimulgus_carolinensis Caprimulgus_vociferus Pandion_haliaetus Accipiter_cooperii Accipiter_striatus Buteo_platypterus Buteo_lineatus Falco_sparverius Falco_mexicanus Athene_cunicularia Bubo_virginianus Strix_varia Otus_asio Otus_kennicottii Tyto_alba Cathartes_aura Podiceps_nigricollis Tachybaptus_ruficollis Phoenicopterus_minor Phoenicopterus_ruber Egretta_rufescens Butorides_striatus Ardea_herodias Bubulcus_ibis Nyctanassa_violacea Nycticorax_nycticorax Egretta_caerulea Egretta_thula Botaurus_lentiginosus Ixobrychus_exilis Pelecanus_occidentalis Eudocimus_ruber Ajaia_ajaja Mycteria_americana Anhinga_anhinga Phalacrocorax_auritus Morus_bassanus Calonectris_diomedea Puffinus_lherminieri Puffinus_gravis Pterodroma_hasitata Oceanites_oceanicus Phoebastria_immutabilis Gavia_immer Porzana_carolina Fulica_americana Gallinula_chloropus Laterallus_jamaicensis Rallus_limicola Porphyrio_martinica Aramus_guarauna Phalaropus_tricolor Calidris_canutus Calidris_melanotos Calidris_alba Calidris_pusilla Arenaria_interpres Gallinago_undulata Fratercula_cirrhata Sterna_maxima Sterna_hirundo Sterna_caspia Sterna_fuscata Sterna_antillarum Larus_atricilla Larus_argentatus Larus_hyperboreus Larus_californicus Larus_delawarensis Rynchops_niger Charadrius_vociferus Recurvirostra_americana Haematopus_palliatus Pluvialis_dominica Columba_livia Streptopelia_capicola Zenaida_asiatica Zenaida_macroura Columbina_passerina Opisthocomus_hoazin Numida_meleagris Gallus_gallus Bonasa_umbellus Canachites_canadensis Tetrao_urogallus Centrocercus_urophasianus Dendragapus_obscurus Tympanuchus_phasianellus Tympanuchus_cupido Lagopus_lagopus Lagopus_mutus Meleagris_gallopavo Chrysolophus_pictus Perdix_perdix Alectoris_graeca Coturnix_japonica Oreortyx_pictus Callipepla_douglasii Callipepla_californica Callipepla_gambelii Colinus_virginianus Cyrtonyx_montezumae Cairina_moschata Aix_sponsa Anas_fulvigula Anas_platyrhynchos Anas_americana Anas_discors Aythya_collaris Mergus_serrator Anser_cygnoides Struthio_camelus Dromaius_novaehollandiae Apteryx_mantelli Rhea_americana Crypturellus_tataupa Nothoprocta_cinerascens Nothoprocta_ornata Nothura_darwini Nothura_maculosa ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=13; FORMAT DATATYPE = STANDARD GAP = - MISSING = ? SYMBOLS = " 0 1 2 3 4 5 6 7 8 9 A B C D E F G H J K M N P Q R S T U V W X Y Z a b c d e f g h j k m n p q r s t u v w x y z"; CHARSTATELABELS 1 Carnivory_Status / Fa 'Non-Fa', 2 Dietary_Category / N C AI I O GrFr H, 3 Relative_Cecal_Size / Absent Small Medium Large, 4 Body_Mass / Small Medium Large Extra_Large, 5 Dichotomous_Cecal_Length / 'Small/Absent' Large_, 6 Flight_ability / Flighted Limited_flight Flightless, 7 Nectarivore / no yes, 8 Carnivore / no yes, 9 Aquatic_invertebrates / no yes, 10 Insectivore / no yes, 11 Omnivore / no yes, 12 'Granivore/frugivore' / no yes, 13 Herbivore / no yes ; MATRIX Tachycineta_bicolor 0321000001000 Progne_subis 0301000001000 Hirundo_rustica 0321000001000 Piranga_olivacea 0301000001000 Quiscalus_quiscula 1421000000100 Quiscalus_major 1422000000100 Junco_hyemalis 1521000000010 Parula_americana 0300000001000 Geothlypis_trichas 0300000001000 Coccothraustes_vespertinus 1511000000010 Hylocichla_mustelina 0321000001000 Catharus_ustulatus 0311000001000 Turdus_migratorius 0321000001000 Cyanocitta_cristata 1421000000100 Corvus_corax 1422000000100 Lanius_ludovicianus 0321000001000 Vireo_flavifrons 0321000001000 Myiopsitta_monachus 1502000000010 Psittacus_erithacus 1502000000010 Cacatua_galerita 1502000000010 Nymphicus_hollandicus 1501000000010 Selenidera_spectabilis 0302000001000 Colaptes_auratus 0301000001000 Dryocopus_pileatus 0302000001000 Sphyrapicus_varius 0301000001000 Megaceryle_alcyon 0C02000100000 Coracias_abyssinica 0332100001000 Trogon_collaris 0321000001000 Trogon_viridis 0331100001000 Trogon_violaceus 0321000001000 Coccyzus_americanus 0331100001000 Crotophaga_ani 0321100001000 Geococcyx_californianus 0332110001000 Archilochus_colubris 1N21001000000 Calypte_anna 1N20001000000 Caprimulgus_carolinensis 0331100001000 Caprimulgus_vociferus 0331100001000 Pandion_haliaetus 0C13000100000 Accipiter_cooperii 0C12000100000 Accipiter_striatus 0C01000100000 Buteo_platypterus 0C12000100000 Buteo_lineatus 0C02000100000 Falco_sparverius 0311000001000 Falco_mexicanus 0C02000100000 Athene_cunicularia 0C32100100000 Bubo_virginianus 0C33100100000 Strix_varia 0C32100100000 Otus_asio 0C31100100000 Otus_kennicottii 0C31100100000 Tyto_alba 0C32100100000 Cathartes_aura 0C03000100000 Podiceps_nigricollis 0222000010000 Tachybaptus_ruficollis 0212000010000 Phoenicopterus_minor 0213000010000 Phoenicopterus_ruber 0223000010000 Egretta_rufescens 0C12000100000 Butorides_striatus 0C02000100000 Ardea_herodias 0C13000100000 Bubulcus_ibis 0C12000100000 Nyctanassa_violacea 0212000010000 Nycticorax_nycticorax 0C12000100000 Egretta_caerulea 0C12000100000 Egretta_thula 0C12000100000 Botaurus_lentiginosus 0C12000100000 Ixobrychus_exilis 0C01000100000 Pelecanus_occidentalis 0C23000100000 Eudocimus_ruber 0212000010000 Ajaia_ajaja 0C13000100000 Mycteria_americana 0C13000100000 Anhinga_anhinga 0C12000100000 Phalacrocorax_auritus 0C12000100000 Morus_bassanus 0C13000100000 Calonectris_diomedea 0C22000100000 Puffinus_lherminieri 0C12000100000 Puffinus_gravis 0C12000100000 Pterodroma_hasitata 0C12000100000 Oceanites_oceanicus 0C12000100000 Phoebastria_immutabilis 0C13000100000 Gavia_immer 0C23000100000 Porzana_carolina 1H21100000001 Fulica_americana 1432110000100 Gallinula_chloropus 1H22100000001 Laterallus_jamaicensis 0321010001000 Rallus_limicola 0232110010000 Porphyrio_martinica 1422110000100 Aramus_guarauna 0222100010000 Phalaropus_tricolor 0231100010000 Calidris_canutus 0332100001000 Calidris_melanotos 0321100001000 Calidris_alba 0331100001000 Calidris_pusilla 0321100001000 Arenaria_interpres 0321100001000 Gallinago_undulata 0321100001000 Fratercula_cirrhata 0C12100100000 Sterna_maxima 0C22100100000 Sterna_hirundo 0C21000100000 Sterna_caspia 0C12100100000 Sterna_fuscata 0C12100100000 Sterna_antillarum 0C11000100000 Larus_atricilla 0C12100100000 Larus_argentatus 1422100000100 Larus_hyperboreus 1413000000100 Larus_californicus 0312100001000 Larus_delawarensis 1422100000100 Rynchops_niger 0C22100100000 Charadrius_vociferus 0331100001000 Recurvirostra_americana 1422100000100 Haematopus_palliatus 0222100010000 Pluvialis_dominica 0322100001000 Columba_livia 1512100000010 Streptopelia_capicola 1512100000010 Zenaida_asiatica 1502100000010 Zenaida_macroura 1501000000010 Columbina_passerina 1501000000010 Opisthocomus_hoazin 1H22110000001 Numida_meleagris 1H33100000001 Gallus_gallus 1523100000010 Bonasa_umbellus 1432100000100 Canachites_canadensis 1H32110000001 Tetrao_urogallus 1533110000010 Centrocercus_urophasianus 1533100000010 Dendragapus_obscurus 1533110000010 Tympanuchus_phasianellus 1H32100000001 Tympanuchus_cupido 1533100000010 Lagopus_lagopus 1H32110000001 Lagopus_mutus 1H32100000001 Meleagris_gallopavo 1433100000100 Chrysolophus_pictus 1532110000010 Perdix_perdix 1532110000010 Alectoris_graeca 1532110000010 Coturnix_japonica 1531100000010 Oreortyx_pictus 1532110000010 Callipepla_douglasii 1532100000010 Callipepla_californica 1532100000010 Callipepla_gambelii 1532100000010 Colinus_virginianus 1432100000100 Cyrtonyx_montezumae 1432100000100 Cairina_moschata 1422100000100 Aix_sponsa 0C22100100000 Anas_fulvigula 0C22100100000 Anas_platyrhynchos 1532100000010 Anas_americana 1H32100000001 Anas_discors 1522100000010 Aythya_collaris 1H32100000001 Mergus_serrator 0C22100100000 Anser_cygnoides 1H33100000001 Struthio_camelus 1H???20000001 Dromaius_novaehollandiae 14???20000100 Apteryx_mantelli 03???20001000 Rhea_americana 1H???20000001 Crypturellus_tataupa 15???10000010 Nothoprocta_cinerascens 03???10001000 Nothoprocta_ornata 15???10000010 Nothura_darwini 15???10000010 Nothura_maculosa 05???10000010 ; END; BEGIN CHARACTERS; TITLE Character_Matrix2; DIMENSIONS NCHAR=0; FORMAT DATATYPE = STANDARD GAP = - MISSING = ? SYMBOLS = " 0 1"; MATRIX Tachycineta_bicolor Progne_subis Hirundo_rustica Piranga_olivacea Quiscalus_quiscula Quiscalus_major Junco_hyemalis Parula_americana Geothlypis_trichas Coccothraustes_vespertinus Hylocichla_mustelina Catharus_ustulatus Turdus_migratorius Cyanocitta_cristata Corvus_corax Lanius_ludovicianus Vireo_flavifrons Myiopsitta_monachus Psittacus_erithacus Cacatua_galerita Nymphicus_hollandicus Selenidera_spectabilis Colaptes_auratus Dryocopus_pileatus Sphyrapicus_varius Megaceryle_alcyon Coracias_abyssinica Trogon_collaris Trogon_viridis Trogon_violaceus Coccyzus_americanus Crotophaga_ani Geococcyx_californianus Archilochus_colubris Calypte_anna Caprimulgus_carolinensis Caprimulgus_vociferus Pandion_haliaetus Accipiter_cooperii Accipiter_striatus Buteo_platypterus Buteo_lineatus Falco_sparverius Falco_mexicanus Athene_cunicularia Bubo_virginianus Strix_varia Otus_asio Otus_kennicottii Tyto_alba Cathartes_aura Podiceps_nigricollis Tachybaptus_ruficollis Phoenicopterus_minor Phoenicopterus_ruber Egretta_rufescens Butorides_striatus Ardea_herodias Bubulcus_ibis Nyctanassa_violacea Nycticorax_nycticorax Egretta_caerulea Egretta_thula Botaurus_lentiginosus Ixobrychus_exilis Pelecanus_occidentalis Eudocimus_ruber Ajaia_ajaja Mycteria_americana Anhinga_anhinga Phalacrocorax_auritus Morus_bassanus Calonectris_diomedea Puffinus_lherminieri Puffinus_gravis Pterodroma_hasitata Oceanites_oceanicus Phoebastria_immutabilis Gavia_immer Porzana_carolina Fulica_americana Gallinula_chloropus Laterallus_jamaicensis Rallus_limicola Porphyrio_martinica Aramus_guarauna Phalaropus_tricolor Calidris_canutus Calidris_melanotos Calidris_alba Calidris_pusilla Arenaria_interpres Gallinago_undulata Fratercula_cirrhata Sterna_maxima Sterna_hirundo Sterna_caspia Sterna_fuscata Sterna_antillarum Larus_atricilla Larus_argentatus Larus_hyperboreus Larus_californicus Larus_delawarensis Rynchops_niger Charadrius_vociferus Recurvirostra_americana Haematopus_palliatus Pluvialis_dominica Columba_livia Streptopelia_capicola Zenaida_asiatica Zenaida_macroura Columbina_passerina Opisthocomus_hoazin Numida_meleagris Gallus_gallus Bonasa_umbellus Canachites_canadensis Tetrao_urogallus Centrocercus_urophasianus Dendragapus_obscurus Tympanuchus_phasianellus Tympanuchus_cupido Lagopus_lagopus Lagopus_mutus Meleagris_gallopavo Chrysolophus_pictus Perdix_perdix Alectoris_graeca Coturnix_japonica Oreortyx_pictus Callipepla_douglasii Callipepla_californica Callipepla_gambelii Colinus_virginianus Cyrtonyx_montezumae Cairina_moschata Aix_sponsa Anas_fulvigula Anas_platyrhynchos Anas_americana Anas_discors Aythya_collaris Mergus_serrator Anser_cygnoides Struthio_camelus Dromaius_novaehollandiae Apteryx_mantelli Rhea_americana Crypturellus_tataupa Nothoprocta_cinerascens Nothoprocta_ornata Nothura_darwini Nothura_maculosa ; END; BEGIN CHARACTERS; TITLE Continuous_Data; DIMENSIONS NCHAR=4; FORMAT DATATYPE = CONTINUOUS GAP = - MISSING = ?; CHARSTATELABELS 1 %_Cecal_Length, 2 Body_Mass, 3 abs_cecal_length, 4 intestinal_length ; MATRIX Tachycineta_bicolor 2.5 15.4 0.4 15.8 Progne_subis 0.0 30.3 0.0 17.8 Hirundo_rustica 2.1 31.4 0.3 14.6 Piranga_olivacea 0.0 34.8 0.0 20.0 Quiscalus_quiscula 1.2 81.1 0.4 32.2 Quiscalus_major 1.4 178.2 0.7 49.2 Junco_hyemalis 1.2 28.6 0.3 24.7 Parula_americana 0.0 4.3 0.0 9.9 Geothlypis_trichas 0.0 6.3 0.0 11.0 Coccothraustes_vespertinus 0.4 80.0 0.2 51.0 Hylocichla_mustelina 2.0 51.7 0.5 24.6 Catharus_ustulatus 1.0 42.1 0.2 20.2 Turdus_migratorius 1.1 76.6 0.3 28.0 Cyanocitta_cristata 3.0 61.0 1.1 36.8 Corvus_corax 1.8 874.0 2.0 112.3 Lanius_ludovicianus 1.1 28.7 0.3 28.7 Vireo_flavifrons 6.7 20.0 1.0 15.0 Myiopsitta_monachus 0.0 376.6 0.0 52.6 Psittacus_erithacus 0.0 429.8 0.0 114.0 Cacatua_galerita 0.0 589.0 0.0 130.5 Nymphicus_hollandicus 0.0 76.0 0.0 41.4 Selenidera_spectabilis 0.0 149.3 0.0 2.06 Colaptes_auratus 0.0 78.9 0.0 29.5 Dryocopus_pileatus 0.0 178.3 0.0 51.0 Sphyrapicus_varius 0.0 38.9 0.0 28.7 Megaceryle_alcyon 0.0 221.8 0.0 97.2 Coracias_abyssinica 15.0 119.8 3.7 24.7 Trogon_collaris 4.4 55.5 3.2 72.7 Trogon_viridis 15.5 90.5 3.6 23.3 Trogon_violaceus 6.2 47.5 2.8 45.0 Coccyzus_americanus 12.0 46.0 3.7 30.9 Crotophaga_ani 9.8 70.0 2.9 29.7 Geococcyx_californianus 14.2 171.1 6.5 45.8 Archilochus_colubris 1.8 28.6 0.1 5.6 Calypte_anna 5.0 3.0 0.3 6.0 Caprimulgus_carolinensis 15.6 89.1 4.3 27.6 Caprimulgus_vociferus 13.4 34.3 2.4 17.9 Pandion_haliaetus 0.3 1104.5 0.5 204.0 Accipiter_cooperii 0.2 411.6 0.1 46.5 Accipiter_striatus 0.0 81.6 0.0 36.0 Buteo_platypterus 0.2 227.2 0.1 60.0 Buteo_lineatus 0.0 459.7 0.0 96.9 Falco_sparverius 0.0 87.7 0.0 35.6 Falco_mexicanus 0.0 338.0 0.0 65.5 Athene_cunicularia 13.4 117.9 4.6 34.3 Bubo_virginianus 11.2 1057.2 9.9 88.4 Strix_varia 11.7 651.0 8.9 76.2 Otus_asio 15.87 83.2 4.4 27.9 Otus_kennicottii 15.7 79.7 4.1 26.2 Tyto_alba 12.1 419.6 6.9 57.0 Cathartes_aura 0.0 2097.0 0.0 130.5 Podiceps_nigricollis 4.8 347.4 6.0 125.4 Tachybaptus_ruficollis 0.5 202.2 0.4 79.5 Phoenicopterus_minor 1.0 1158.0 3.2 317.8 Phoenicopterus_ruber 3.4 1878.3 9.0 266.5 Egretta_rufescens 0.9 786.0 1.8 198.0 Butorides_striatus 0.0 178.8 0.0 91.0 Ardea_herodias 0.5 1914.0 1.0 193.1 Bubulcus_ibis 0.4 220.7 0.2 55.2 Nyctanassa_violacea 0.3 511.0 0.4 137.1 Nycticorax_nycticorax 0.8 486.9 1.0 127.9 Egretta_caerulea 0.6 253.6 0.6 98.0 Egretta_thula 0.7 289.3 0.7 97.3 Botaurus_lentiginosus 0.6 248.0 0.7 113.9 Ixobrychus_exilis 0.0 61.5 0.0 68.5 Pelecanus_occidentalis 2.0 1947.7 4.7 239.6 Eudocimus_ruber 0.5 611.9 0.5 103.0 Ajaia_ajaja 0.5 1543.0 0.8 161.6 Mycteria_americana 0.2 1800.0 0.6 295.5 Anhinga_anhinga 0.1 605.6 0.1 115.8 Phalacrocorax_auritus 0.9 803.3 1.1 127.7 Morus_bassanus 0.9 1731.3 1.1 122.8 Calonectris_diomedea 1.9 404.9 1.0 53.1 Puffinus_lherminieri 0.8 107.0 0.3 40.2 Puffinus_gravis 0.8 380.0 0.6 72.4 Pterodroma_hasitata 0.7 446.0 0.5 69.0 Oceanites_oceanicus 0.9 144.8 0.4 42.8 Phoebastria_immutabilis 0.8 2460.0 1.5 180.0 Gavia_immer 3.4 1797.6 5.3 157.0 Porzana_carolina 8.9 51.2 3.4 38.2 Fulica_americana 16.5 383.8 15.3 92.8 Gallinula_chloropus 8.7 225.3 11.0 126.7 Laterallus_jamaicensis 6.1 18.5 1.2 19.7 Rallus_limicola 12.2 129.7 5.0 40.9 Porphyrio_martinica 7.3 163.9 3.5 47.7 Aramus_guarauna 8.3 591.6 5.9 71.0 Phalaropus_tricolor 11.5 61.2 3.9 34.0 Calidris_canutus 10.1 102.6 4.1 40.6 Calidris_melanotos 7.5 27.6 1.9 25.5 Calidris_alba 10.7 51.5 3.0 28.1 Calidris_pusilla 9.5 22.5 2.5 26.3 Arenaria_interpres 9.7 79.4 4.1 42.5 Gallinago_undulata 8.5 69.3 2.7 31.9 Fratercula_cirrhata 0.7 913.5 0.6 84.5 Sterna_maxima 1.4 260.5 0.9 65.8 Sterna_hirundo 1.7 76.3 0.6 36.4 Sterna_caspia 1.0 423.2 0.8 83.7 Sterna_fuscata 0.4 195.0 0.2 46.9 Sterna_antillarum 0.9 24.8 0.2 23.0 Larus_atricilla 0.9 267.5 0.5 54.6 Larus_argentatus 1.1 787.9 1.1 96.5 Larus_hyperboreus 0.8 1132.0 1.0 123.5 Larus_californicus 0.5 470.0 0.5 106.4 Larus_delawarensis 1.2 259.7 0.9 74.1 Rynchops_niger 2.0 288.2 0.9 44.7 Charadrius_vociferus 11.4 25.6 2.8 24.6 Recurvirostra_americana 9.0 320.5 6.7 74.3 Haematopus_palliatus 5.3 461.0 4.9 93.2 Pluvialis_dominica 2.8 158.6 2.3 81.3 Columba_livia 0.6 286.0 0.5 84.3 Streptopelia_capicola 0.4 119.4 0.2 52.0 Zenaida_asiatica 0.0 140.1 0.0 56.0 Zenaida_macroura 0.0 100.7 0.0 49.5 Columbina_passerina 0.0 32.3 0.0 31.3 Opisthocomus_hoazin 4.9 750.0 4.0 82.2 Numida_meleagris 15.0 1315.0 39.4 262.7 Gallus_gallus 9.6 2580.2 18.3 191.5 Bonasa_umbellus 40.1 397.9 41.8 104.3 Canachites_canadensis 34.5 576.0 40.0 116.0 Tetrao_urogallus 29.4 2500.0 52.0 177.0 Centrocercus_urophasianus 49.2 1427.0 73.0 148.0 Dendragapus_obscurus 36.2 1250.0 50.0 138.0 Tympanuchus_phasianellus 36.2 850.0 49.0 135.5 Tympanuchus_cupido 34.4 1120.0 45.0 131.0 Lagopus_lagopus 45.4 525.0 47.0 103.5 Lagopus_mutus 40.9 502.0 47.0 115.0 Meleagris_gallopavo 20.0 7300.0 46.5 232.8 Chrysolophus_pictus 13.2 366.7 9.6 72.7 Perdix_perdix 28.2 395.0 19.0 67.3 Alectoris_graeca 22.1 576.0 19.0 86.0 Coturnix_japonica 16.5 90.0 26.3 158.4 Oreortyx_pictus 19.9 250.0 17.5 88.0 Callipepla_douglasii 15.3 175.0 10.5 68.5 Callipepla_californica 16.2 173.0 13.9 86.0 Callipepla_gambelii 12.6 188.0 11.3 89.0 Colinus_virginianus 15.1 161.1 11.3 74.7 Cyrtonyx_montezumae 21.5 186.0 11.5 53.5 Cairina_moschata 9.3 585.0 12.8 137.9 Aix_sponsa 8.1 537.3 8.9 109.5 Anas_fulvigula 8.9 543.9 12.6 142.0 Anas_platyrhynchos 11.0 1082.0 16.1 169.5 Anas_americana 15.6 530.0 22.5 144.4 Anas_discors 6.2 250.3 6.6 106.1 Aythya_collaris 10.5 612.1 13.3 126.9 Mergus_serrator 1.9 461.4 2.8 144.6 Anser_cygnoides 12.4 3150.0 90.2 758.0 Struthio_camelus ? 103000.0 160.0 ? Dromaius_novaehollandiae ? 38300.0 12.0 ? Apteryx_mantelli ? 2012.0 16.5 ? Rhea_americana ? 8500.0 48.0 ? Crypturellus_tataupa ? 220.0 1.25 ? Nothoprocta_cinerascens ? 526.0 2.4 ? Nothoprocta_ornata ? 514.0 18.7 ? Nothura_darwini ? 234.0 14.1 ? Nothura_maculosa ? 247.0 3.1 ? ; END; BEGIN TREES; Title 'Trees from "5.BirdSupertree.tre"'; ID 0157b04c20e21; LINK Taxa = Taxa; TRANSLATE [0] 1 Tachycineta_bicolor, [1] 2 Progne_subis, [2] 3 Hirundo_rustica, [3] 4 Piranga_olivacea, [4] 5 Quiscalus_quiscula, [5] 6 Quiscalus_major, [6] 7 Junco_hyemalis, [7] 8 Parula_americana, [8] 9 Geothlypis_trichas, [9] 10 Coccothraustes_vespertinus, [10] 11 Hylocichla_mustelina, [11] 12 Catharus_ustulatus, [12] 13 Turdus_migratorius, [13] 14 Cyanocitta_cristata, [14] 15 Corvus_corax, [15] 16 Lanius_ludovicianus, [16] 17 Vireo_flavifrons, [17] 18 Myiopsitta_monachus, [18] 19 Psittacus_erithacus, [19] 20 Cacatua_galerita, [20] 21 Nymphicus_hollandicus, [21] 22 Selenidera_spectabilis, [22] 23 Colaptes_auratus, [23] 24 Dryocopus_pileatus, [24] 25 Sphyrapicus_varius, [25] 26 Megaceryle_alcyon, [26] 27 Coracias_abyssinica, [27] 28 Trogon_collaris, [28] 29 Trogon_viridis, [29] 30 Trogon_violaceus, [30] 31 Coccyzus_americanus, [31] 32 Crotophaga_ani, [32] 33 Geococcyx_californianus, [33] 34 Archilochus_colubris, [34] 35 Calypte_anna, [35] 36 Caprimulgus_carolinensis, [36] 37 Caprimulgus_vociferus, [37] 38 Pandion_haliaetus, [38] 39 Accipiter_cooperii, [39] 40 Accipiter_striatus, [40] 41 Buteo_platypterus, [41] 42 Buteo_lineatus, [42] 43 Falco_sparverius, [43] 44 Falco_mexicanus, [44] 45 Athene_cunicularia, [45] 46 Bubo_virginianus, [46] 47 Strix_varia, [47] 48 Otus_asio, [48] 49 Otus_kennicottii, [49] 50 Tyto_alba, [50] 51 Cathartes_aura, [51] 52 Podiceps_nigricollis, [52] 53 Tachybaptus_ruficollis, [53] 54 Phoenicopterus_minor, [54] 55 Phoenicopterus_ruber, [55] 56 Egretta_rufescens, [56] 57 Butorides_striatus, [57] 58 Ardea_herodias, [58] 59 Bubulcus_ibis, [59] 60 Nyctanassa_violacea, [60] 61 Nycticorax_nycticorax, [61] 62 Egretta_caerulea, [62] 63 Egretta_thula, [63] 64 Botaurus_lentiginosus, [64] 65 Ixobrychus_exilis, [65] 66 Pelecanus_occidentalis, [66] 67 Eudocimus_ruber, [67] 68 Ajaia_ajaja, [68] 69 Mycteria_americana, [69] 70 Anhinga_anhinga, [70] 71 Phalacrocorax_auritus, [71] 72 Morus_bassanus, [72] 73 Calonectris_diomedea, [73] 74 Puffinus_lherminieri, [74] 75 Puffinus_gravis, [75] 76 Pterodroma_hasitata, [76] 77 Oceanites_oceanicus, [77] 78 Phoebastria_immutabilis, [78] 79 Gavia_immer, [79] 80 Porzana_carolina, [80] 81 Fulica_americana, [81] 82 Gallinula_chloropus, [82] 83 Laterallus_jamaicensis, [83] 84 Rallus_limicola, [84] 85 Porphyrio_martinica, [85] 86 Aramus_guarauna, [86] 87 Phalaropus_tricolor, [87] 88 Calidris_canutus, [88] 89 Calidris_melanotos, [89] 90 Calidris_alba, [90] 91 Calidris_pusilla, [91] 92 Arenaria_interpres, [92] 93 Gallinago_undulata, [93] 94 Fratercula_cirrhata, [94] 95 Sterna_maxima, [95] 96 Sterna_hirundo, [96] 97 Sterna_caspia, [97] 98 Sterna_fuscata, [98] 99 Sterna_antillarum, [99] 100 Larus_atricilla, [100] 101 Larus_argentatus, [101] 102 Larus_hyperboreus, [102] 103 Larus_californicus, [103] 104 Larus_delawarensis, [104] 105 Rynchops_niger, [105] 106 Charadrius_vociferus, [106] 107 Recurvirostra_americana, [107] 108 Haematopus_palliatus, [108] 109 Pluvialis_dominica, [109] 110 Columba_livia, [110] 111 Streptopelia_capicola, [111] 112 Zenaida_asiatica, [112] 113 Zenaida_macroura, [113] 114 Columbina_passerina, [114] 115 Opisthocomus_hoazin, [115] 116 Numida_meleagris, [116] 117 Gallus_gallus, [117] 118 Bonasa_umbellus, [118] 119 Canachites_canadensis, [119] 120 Tetrao_urogallus, [120] 121 Centrocercus_urophasianus, [121] 122 Dendragapus_obscurus, [122] 123 Tympanuchus_phasianellus, [123] 124 Tympanuchus_cupido, [124] 125 Lagopus_lagopus, [125] 126 Lagopus_mutus, [126] 127 Meleagris_gallopavo, [127] 128 Chrysolophus_pictus, [128] 129 Perdix_perdix, [129] 130 Alectoris_graeca, [130] 131 Coturnix_japonica, [131] 132 Oreortyx_pictus, [132] 133 Callipepla_douglasii, [133] 134 Callipepla_californica, [134] 135 Callipepla_gambelii, [135] 136 Colinus_virginianus, [136] 137 Cyrtonyx_montezumae, [137] 138 Cairina_moschata, [138] 139 Aix_sponsa, [139] 140 Anas_fulvigula, [140] 141 Anas_platyrhynchos, [141] 142 Anas_americana, [142] 143 Anas_discors, [143] 144 Aythya_collaris, [144] 145 Mergus_serrator, [145] 146 Anser_cygnoides, [146] n146 Struthio_camelus, [147] n147 Dromaius_novaehollandiae, [148] n148 Apteryx_mantelli, [149] n149 Rhea_americana, [150] n150 Crypturellus_tataupa, [151] n151 Nothoprocta_cinerascens, [152] n152 Nothoprocta_ornata, [153] n153 Nothura_darwini, [154] n154 Nothura_maculosa; TREE 'tree 1+' = (((((((((((((((1:1,2:1):1,3:1):1,(((4:1,(((5:1,6:1):1,7:1):1,(8:1,9:1):1):1):1,10:1):1,((11:1,12:1):1,13:1):1):1):1,(((14:1,15:1):1,16:1):1,17:1):1):1,((18:1,19:1):1,(20:1,21:1):1):1):1,(43:1,44:1):1):1,(((45:1,((46:1,47:1):1,(48:1,49:1):1):1):1,50:1):1,(((22:1,((23:1,24:1):1,25:1):1):1,(26:1,27:1):1):1,(28:1,(29:1,30:1):1):1):1):1):1,((38:1,((39:1,40:1):1,(41:1,42:1):1):1):1,51:1):1):1,115:1):1,((((52:1,53:1):1,(54:1,55:1):1):1,(((((56:1,((((57:1,(58:1,59:1):1):1,(60:1,61:1):1):1,(62:1,63:1):1):1,(64:1,65:1):1):1):1,66:1):1,((67:1,68:1):1,69:1):1):1,((70:1,71:1):1,72:1):1):1,((((((73:1,74:1):1,75:1):1,76:1):1,77:1):1,78:1):1,79:1):1):1):1,((((87:1,((88:1,(89:1,(90:1,91:1):1):1):1,92:1):1):1,93:1):1,(94:1,((((((95:1,96:1):1,97:1):1,98:1):1,99:1):1,(100:1,(((101:1,102:1):1,103:1):1,104:1):1):1):1,105:1):1):1):1,(106:1,((107:1,108:1):1,109:1):1):1):1):1):1,(((((80:1,(81:1,82:1):1):1,83:1):1,84:1):1,85:1):1,86:1):1):1,((31:1,(32:1,33:1):1):1,(((110:1,111:1):1,(112:1,113:1):1):1,114:1):1):1):1,((34:1,35:1):1,(36:1,37:1):1):1):1,((116:1,(((117:1,(((118:1,((119:1,120:1):1,((121:1,(122:1,(123:1,124:1):1):1):1,(125:1,126:1):1):1):1):1,127:1):1,(128:1,129:1):1):1):1,(130:1,131:1):1):1,((132:1,((133:1,(134:1,135:1):1):1,136:1):1):1,137:1):1):1):1,((((138:1,139:1):1,((((140:1,141:1):1,142:1):1,143:1):1,144:1):1):1,145:1):1,146:1):1):1):1,(n146:1,(n149:1,((n147:1,n148:1):1,(n150:1,((n151:1,n152:1):1,(n154:1,n153:1):1):1):1):1):1):1):1; END; BEGIN NOTES; SUT TAXON = 1 NAME = color INTEGER = 5; SUT TAXON = 2 NAME = color INTEGER = 5; SUT TAXON = 3 NAME = color INTEGER = 5; SUT TAXON = 4 NAME = color INTEGER = 5; SUT TAXON = 5 NAME = color INTEGER = 5; SUT TAXON = 6 NAME = color INTEGER = 5; SUT TAXON = 7 NAME = color INTEGER = 5; SUT TAXON = 8 NAME = color INTEGER = 5; SUT TAXON = 9 NAME = color INTEGER = 5; SUT TAXON = 10 NAME = color INTEGER = 5; SUT TAXON = 11 NAME = color INTEGER = 5; SUT TAXON = 12 NAME = color INTEGER = 5; SUT TAXON = 13 NAME = color INTEGER = 5; SUT TAXON = 14 NAME = color INTEGER = 5; SUT TAXON = 15 NAME = color INTEGER = 5; SUT TAXON = 16 NAME = color INTEGER = 5; SUT TAXON = 17 NAME = color INTEGER = 5; SUT TAXON = 18 NAME = color INTEGER = 5; SUT TAXON = 19 NAME = color INTEGER = 5; SUT TAXON = 20 NAME = color INTEGER = 5; SUT TAXON = 21 NAME = color INTEGER = 5; SUT TAXON = 22 NAME = color INTEGER = 5; SUT TAXON = 23 NAME = color INTEGER = 5; SUT TAXON = 24 NAME = color INTEGER = 5; SUT TAXON = 25 NAME = color INTEGER = 5; SUT TAXON = 26 NAME = color INTEGER = 5; SUT TAXON = 27 NAME = color INTEGER = 5; SUT TAXON = 28 NAME = color INTEGER = 5; SUT TAXON = 29 NAME = color INTEGER = 5; SUT TAXON = 30 NAME = color INTEGER = 5; SUT TAXON = 31 NAME = color INTEGER = 5; SUT TAXON = 32 NAME = color INTEGER = 5; SUT TAXON = 33 NAME = color INTEGER = 5; SUT TAXON = 34 NAME = color INTEGER = 5; SUT TAXON = 35 NAME = color INTEGER = 5; SUT TAXON = 36 NAME = color INTEGER = 5; SUT TAXON = 37 NAME = color INTEGER = 5; SUT TAXON = 38 NAME = color INTEGER = 5; SUT TAXON = 39 NAME = color INTEGER = 5; SUT TAXON = 40 NAME = color INTEGER = 5; SUT TAXON = 41 NAME = color INTEGER = 5; SUT TAXON = 42 NAME = color INTEGER = 5; SUT TAXON = 43 NAME = color INTEGER = 5; SUT TAXON = 44 NAME = color INTEGER = 5; SUT TAXON = 45 NAME = color INTEGER = 5; SUT TAXON = 46 NAME = color INTEGER = 5; SUT TAXON = 47 NAME = color INTEGER = 5; SUT TAXON = 48 NAME = color INTEGER = 5; SUT TAXON = 49 NAME = color INTEGER = 5; SUT TAXON = 50 NAME = color INTEGER = 5; SUT TAXON = 51 NAME = color INTEGER = 5; SUT TAXON = 52 NAME = color INTEGER = 5; SUT TAXON = 53 NAME = color INTEGER = 5; SUT TAXON = 54 NAME = color INTEGER = 5; SUT TAXON = 55 NAME = color INTEGER = 5; SUT TAXON = 56 NAME = color INTEGER = 5; SUT TAXON = 57 NAME = color INTEGER = 5; SUT TAXON = 58 NAME = color INTEGER = 5; SUT TAXON = 59 NAME = color INTEGER = 5; SUT TAXON = 60 NAME = color INTEGER = 5; SUT TAXON = 61 NAME = color INTEGER = 5; SUT TAXON = 62 NAME = color INTEGER = 5; SUT TAXON = 63 NAME = color INTEGER = 5; SUT TAXON = 64 NAME = color INTEGER = 5; SUT TAXON = 65 NAME = color INTEGER = 5; SUT TAXON = 66 NAME = color INTEGER = 5; SUT TAXON = 67 NAME = color INTEGER = 5; SUT TAXON = 68 NAME = color INTEGER = 5; SUT TAXON = 69 NAME = color INTEGER = 5; SUT TAXON = 70 NAME = color INTEGER = 5; SUT TAXON = 71 NAME = color INTEGER = 5; SUT TAXON = 72 NAME = color INTEGER = 5; SUT TAXON = 73 NAME = color INTEGER = 5; SUT TAXON = 74 NAME = color INTEGER = 5; SUT TAXON = 75 NAME = color INTEGER = 5; SUT TAXON = 76 NAME = color INTEGER = 5; SUT TAXON = 77 NAME = color INTEGER = 5; SUT TAXON = 78 NAME = color INTEGER = 5; SUT TAXON = 79 NAME = color INTEGER = 5; SUT TAXON = 80 NAME = color INTEGER = 5; SUT TAXON = 81 NAME = color INTEGER = 5; SUT TAXON = 82 NAME = color INTEGER = 5; SUT TAXON = 83 NAME = color INTEGER = 5; SUT TAXON = 84 NAME = color INTEGER = 5; SUT TAXON = 85 NAME = color INTEGER = 5; SUT TAXON = 86 NAME = color INTEGER = 5; SUT TAXON = 87 NAME = color INTEGER = 5; SUT TAXON = 88 NAME = color INTEGER = 5; SUT TAXON = 89 NAME = color INTEGER = 5; SUT TAXON = 90 NAME = color INTEGER = 5; SUT TAXON = 91 NAME = color INTEGER = 5; SUT TAXON = 92 NAME = color INTEGER = 5; SUT TAXON = 93 NAME = color INTEGER = 5; SUT TAXON = 94 NAME = color INTEGER = 5; SUT TAXON = 95 NAME = color INTEGER = 5; SUT TAXON = 96 NAME = color INTEGER = 5; SUT TAXON = 97 NAME = color INTEGER = 5; SUT TAXON = 98 NAME = color INTEGER = 5; SUT TAXON = 99 NAME = color INTEGER = 5; SUT TAXON = 100 NAME = color INTEGER = 5; SUT TAXON = 101 NAME = color INTEGER = 5; SUT TAXON = 102 NAME = color INTEGER = 5; SUT TAXON = 103 NAME = color INTEGER = 5; SUT TAXON = 104 NAME = color INTEGER = 5; SUT TAXON = 105 NAME = color INTEGER = 5; SUT TAXON = 106 NAME = color INTEGER = 5; SUT TAXON = 107 NAME = color INTEGER = 5; SUT TAXON = 108 NAME = color INTEGER = 5; SUT TAXON = 109 NAME = color INTEGER = 5; SUT TAXON = 110 NAME = color INTEGER = 5; SUT TAXON = 111 NAME = color INTEGER = 5; SUT TAXON = 112 NAME = color INTEGER = 5; SUT TAXON = 113 NAME = color INTEGER = 5; SUT TAXON = 114 NAME = color INTEGER = 5; SUT TAXON = 115 NAME = color INTEGER = 5; SUT TAXON = 116 NAME = color INTEGER = 5; SUT TAXON = 117 NAME = color INTEGER = 5; SUT TAXON = 118 NAME = color INTEGER = 5; SUT TAXON = 119 NAME = color INTEGER = 5; SUT TAXON = 120 NAME = color INTEGER = 5; SUT TAXON = 121 NAME = color INTEGER = 5; SUT TAXON = 122 NAME = color INTEGER = 5; SUT TAXON = 123 NAME = color INTEGER = 5; SUT TAXON = 124 NAME = color INTEGER = 5; SUT TAXON = 125 NAME = color INTEGER = 5; SUT TAXON = 126 NAME = color INTEGER = 5; SUT TAXON = 127 NAME = color INTEGER = 5; SUT TAXON = 128 NAME = color INTEGER = 5; SUT TAXON = 129 NAME = color INTEGER = 5; SUT TAXON = 130 NAME = color INTEGER = 5; SUT TAXON = 131 NAME = color INTEGER = 5; SUT TAXON = 132 NAME = color INTEGER = 5; SUT TAXON = 133 NAME = color INTEGER = 5; SUT TAXON = 134 NAME = color INTEGER = 5; SUT TAXON = 135 NAME = color INTEGER = 5; SUT TAXON = 136 NAME = color INTEGER = 5; SUT TAXON = 137 NAME = color INTEGER = 5; SUT TAXON = 138 NAME = color INTEGER = 5; SUT TAXON = 139 NAME = color INTEGER = 5; SUT TAXON = 140 NAME = color INTEGER = 5; SUT TAXON = 141 NAME = color INTEGER = 5; SUT TAXON = 142 NAME = color INTEGER = 5; SUT TAXON = 143 NAME = color INTEGER = 5; SUT TAXON = 144 NAME = color INTEGER = 5; SUT TAXON = 145 NAME = color INTEGER = 5; SUT TAXON = 146 NAME = color INTEGER = 5; CHARACTERS = Character_Matrix TAXA = Taxa; SU T = 35 C = 1 N = color I = 5; TEXT TAXON = 55 CHARACTER = 5 TEXT = 0; CHARACTERS = Character_Matrix2 TAXA = Taxa; CHARACTERS = Continuous_Data TAXA = Taxa; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED (CHARACTERS = Character_Matrix) = unord: 1- 13; TYPESET * UNTITLED (CHARACTERS = Continuous_Data) = Squared: 1- 4; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED (CHARACTERS = Character_Matrix) = 'Mk1 (est.)': 1- 13; ProbModelSet * UNTITLED (CHARACTERS = Continuous_Data) = Brownian_default: 1- 4; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1544813054222; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 400716375749366861; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 5745877355952878872; mqVersion 351; checksumv 0 3 1110850139 null getNumChars 13 numChars 13 getNumTaxa 155 numTaxa 155 short false bits 2232383 states 2232383 sumSquaresStatesOnly 9.020219897042E12 sumSquares 9.020219897042E12 longCompressibleToShort false usingShortMatrix false NumFiles 1 NumMatrices 3; mqVersion; setID 1 6277201669015097423; mqVersion 351; checksumv 1 3 0 null getNumChars 0 numChars 0 getNumTaxa 155 numTaxa 155 short true bits 0 states 0 sumSquaresStatesOnly 0.0 sumSquares 0.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 3; mqVersion; setID 2 1283599569714650604; mqVersion 351; checksumv 2 3 3220844108 null numChars 4 numItems 1 min 0.0 max 103000.0 sumSquares 1.2291886328183012E10 NumFiles 1 NumMatrices 3; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 369; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1600 822; setLocation 1856 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #400716375749366861 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #400716375749366861; getWindow; tell It; useTargetValue off; setTargetValue ; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; getTable; tell It; rowNamesWidth 249; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1500 750; setLocation 1856 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #400716375749366861 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; setTreeBlockID 0157b04c20e21; toggleUseWeights off; endTell; setAssignedID 929.1476131573728.6736227072222761002; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1500 750; setLocation 1856 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.arrow; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground Wood; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths on; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '(((((((((((((((1,2),3),(((4,(((5,6),7),(8,9))),10),((11,12),13))),(((14,15),16),17)),((18,19),(20,21))),(43,44)),(((45,((46,47),(48,49))),50),(((22,((23,24),25)),(26,27)),(28,(29,30))))),((38,((39,40),(41,42))),51)),115),((((52,53),(54,55)),(((((56,((((57,(58,59)),(60,61)),(62,63)),(64,65))),66),((67,68),69)),((70,71),72)),((((((73,74),75),76),77),78),79))),((((87,((88,(89,(90,91))),92)),93),(94,((((((95,96),97),98),99),(100,(((101,102),103),104))),105))),(106,((107,108),109))))),(((((80,(81,82)),83),84),85),86)),((31,(32,33)),(((110,111),(112,113)),114))),((34,35),(36,37))),((116,(((117,(((118,((119,120),((121,(122,(123,124))),(125,126)))),127),(128,129))),(130,131)),((132,((133,(134,135)),136)),137))),((((138,139),((((140,141),142),143),144)),145),146))),(147,(150,((148,149),(151,((152,153),(155,154)))))));'; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; setDigits 4; setThreshold ?; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #5745877355952878872 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 165; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1500 750; setLocation 1856 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.NoColor.NoColor; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges on; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames on; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize on; toggleColorsPanel off; toggleDiagonal on; setDiagonalHeight 80; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesEditor.StateNamesEditor; tell It; makeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1500 750; setLocation 1856 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.categ.StateNamesEditor.StateNamesWindow.ibeam; endTell; rowsAreCharacters on; toggleConstrainChar on; toggleConstrainCharNum 3; togglePanel off; toggleSummaryPanel off; endTell; showWindow; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.categ.SmallStateNamesEditor.SmallStateNamesEditor; tell It; panelOpen true; endTell; endTell; showDataWindow #6277201669015097423 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1500 750; setLocation 1856 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.NoColor.NoColor; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges on; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames on; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize on; toggleColorsPanel off; toggleDiagonal on; setDiagonalHeight 80; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; getWindow; tell It; forceAutosize; endTell; hideWindow; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.categ.SmallStateNamesEditor.SmallStateNamesEditor; tell It; panelOpen true; endTell; endTell; showDataWindow #1283599569714650604 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 149; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1500 750; setLocation 1856 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.NoColor.NoColor; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges on; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames on; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize on; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.cont.ItemsEditorForInfoPanel.ItemsEditorForInfoPanel; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;