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["Sample ID","Total reads","Total reads after quality filtering and de-hosting","Host","Antiobiotics treated or native?","FMT or noFMT?","Days after FMT?","Individually caged or co-caged?"]
[1,10475220,10007977,"NSG","Native","noFMT","-","individual"]
[2,7902322,7503727,"NSG","Native","noFMT","-","individual"]
[3,7114566,6731289,"NSG","Native","noFMT","-","individual"]
[4,9272624,8856933,"NSG","Native","noFMT","-","cocage"]
[5,12076872,10827211,"NSG","Native","noFMT","-","cocage"]
[6,12568716,12061647,"NSG","Native","noFMT","-","cocage"]
[7,11134210,10150000,"NSG","Native","noFMT","-","individual"]
[8,10975276,9959044,"NSG","Native","noFMT","-","individual"]
[9,10753680,10358118,"NSG","Native","noFMT","-","individual"]
[10,10082362,9252381,"NSG","Native","noFMT","-","cocage"]
[11,10753830,10160146,"NSG","Native","noFMT","-","cocage"]
[12,11121820,10563510,"NSG","Native","noFMT","-","cocage"]
[13,8942864,8554786,"C57BL6","Native","noFMT","-","individual"]
[14,6831072,6688634,"C57BL6","Native","noFMT","-","individual"]
[15,10543470,10249609,"C57BL6","Native","noFMT","-","individual"]
[16,12645288,11880718,"C57BL6","Native","noFMT","-","cocage"]
[17,4620006,4523002,"C57BL6","Native","noFMT","-","cocage"]
[18,4184064,3677631,"C57BL6","Native","noFMT","-","cocage"]
[19,10724050,10180239,"C57BL6","Native","noFMT","-","individual"]
[20,14683258,13768998,"C57BL6","Native","noFMT","-","individual"]
[21,14123484,13380440,"C57BL6","Native","noFMT","-","individual"]
[22,11948108,11513870,"C57BL6","Native","noFMT","-","cocage"]
[23,15623960,15034646,"C57BL6","Native","noFMT","-","cocage"]
[24,13046110,11930988,"C57BL6","Native","noFMT","-","cocage"]
[25,14320422,689927,"NSG","Antibiotics","noFMT","-","individual"]
[26,12396312,725234,"NSG","Antibiotics","noFMT","-","individual"]
[27,15627568,868031,"NSG","Antibiotics","noFMT","-","individual"]
[28,9692486,527778,"NSG","Antibiotics","noFMT","-","cocage"]
[29,14464440,712960,"NSG","Antibiotics","noFMT","-","cocage"]
[30,14735300,718156,"NSG","Antibiotics","noFMT","-","cocage"]
[31,6669144,4924754,"NSG","Native","noFMT","-","individual"]
[32,7618216,7249371,"NSG","Native","noFMT","-","individual"]
[33,10580746,9377442,"NSG","Native","noFMT","-","individual"]
[34,7978808,7342517,"NSG","Native","noFMT","-","cocage"]
[35,3818546,3690212,"NSG","Native","noFMT","-","cocage"]
[36,10644364,9767595,"NSG","Native","noFMT","-","cocage"]
[37,17419868,849657,"C57BL6","Antibiotics","noFMT","-","individual"]
[38,13800018,616116,"C57BL6","Antibiotics","noFMT","-","individual"]
[39,13860382,693635,"C57BL6","Antibiotics","noFMT","-","individual"]
[40,11181312,639213,"C57BL6","Antibiotics","noFMT","-","cocage"]
[41,13409878,693133,"C57BL6","Antibiotics","noFMT","-","cocage"]
[42,9574230,425816,"C57BL6","Antibiotics","noFMT","-","cocage"]
[43,5148902,5059637,"C57BL6","Native","noFMT","-","individual"]
[44,8093968,7826116,"C57BL6","Native","noFMT","-","individual"]
[45,8053566,7583828,"C57BL6","Native","noFMT","-","individual"]
[46,8561652,7990448,"C57BL6","Native","noFMT","-","cocage"]
[47,9745128,9003418,"C57BL6","Native","noFMT","-","cocage"]
[48,12741118,10693023,"C57BL6","Native","noFMT","-","cocage"]
[49,11160708,1243395,"NSG","Antibiotics","noFMT","-","individual"]
[50,3051910,260918,"NSG","Antibiotics","noFMT","-","individual"]
[51,8542758,742934,"NSG","Antibiotics","noFMT","-","individual"]
[52,6317768,630974,"NSG","Antibiotics","noFMT","-","cocage"]
[53,4728620,665086,"NSG","Antibiotics","noFMT","-","cocage"]
[54,4577454,469700,"NSG","Antibiotics","noFMT","-","cocage"]
[55,4092598,3518725,"NSG","Native","noFMT","-","individual"]
[56,5729540,5629230,"NSG","Native","noFMT","-","individual"]
[57,9862080,8742034,"NSG","Native","noFMT","-","individual"]
[58,6751834,5711332,"NSG","Native","noFMT","-","cocage"]
[59,4267168,3993749,"NSG","Native","noFMT","-","cocage"]
[60,12524926,11371425,"NSG","Native","noFMT","-","cocage"]
[61,11962860,676774,"C57BL6","Antibiotics","noFMT","-","individual"]
[62,6995034,849378,"C57BL6","Antibiotics","noFMT","-","individual"]
[63,10781752,1155384,"C57BL6","Antibiotics","noFMT","-","individual"]
[64,6455804,613414,"C57BL6","Antibiotics","noFMT","-","cocage"]
[65,6409458,785149,"C57BL6","Antibiotics","noFMT","-","cocage"]
[66,6335326,360833,"C57BL6","Antibiotics","noFMT","-","cocage"]
[67,4681832,4565647,"C57BL6","Native","noFMT","-","individual"]
[68,6478600,6318384,"C57BL6","Native","noFMT","-","individual"]
[69,4551880,4481196,"C57BL6","Native","noFMT","-","individual"]
[70,8249908,8123649,"C57BL6","Native","noFMT","-","cocage"]
[71,11689968,10787408,"C57BL6","Native","noFMT","-","cocage"]
[72,10957660,8905796,"C57BL6","Native","noFMT","-","cocage"]
[73,9531554,9249361,"NSG","Antibiotics","FMT","7days","individual"]
[74,9969818,9480410,"NSG","Antibiotics","FMT","7days","individual"]
[75,8065690,7509234,"NSG","Antibiotics","FMT","7days","individual"]
[76,8389848,8139922,"NSG","Antibiotics","FMT","7days","cocage"]
[77,7625118,7249412,"NSG","Antibiotics","FMT","7days","cocage"]
[78,7095692,6605465,"NSG","Native","FMT","7days","individual"]
[79,7831614,7577154,"NSG","Native","FMT","7days","individual"]
[80,6106978,5764140,"NSG","Native","FMT","7days","individual"]
[81,5064874,4927385,"NSG","Native","FMT","7days","cocage"]
[82,6239642,6143177,"NSG","Native","FMT","7days","cocage"]
[83,8563682,8463075,"NSG","Native","FMT","7days","cocage"]
[84,2827862,2743697,"C57BL6","Antibiotics","FMT","7days","individual"]
[85,3326622,3181490,"C57BL6","Antibiotics","FMT","7days","individual"]
[86,11222736,10947746,"C57BL6","Antibiotics","FMT","7days","individual"]
[87,3564692,3445922,"C57BL6","Antibiotics","FMT","7days","cocage"]
[88,1896692,1862181,"C57BL6","Antibiotics","FMT","7days","cocage"]
[89,8351078,8048423,"C57BL6","Antibiotics","FMT","7days","cocage"]
[90,4885858,4800164,"C57BL6","Native","FMT","7days","individual"]
[91,5359576,5261918,"C57BL6","Native","FMT","7days","individual"]
[92,6343088,6215738,"C57BL6","Native","FMT","7days","individual"]
[93,4967606,4871731,"C57BL6","Native","FMT","7days","cocage"]
[94,11395470,11059586,"C57BL6","Native","FMT","7days","cocage"]
[95,13316332,11705395,"C57BL6","Native","FMT","7days","cocage"]
[96,4333792,4244532,"NSG","Native","FMT","14days","individual"]
[97,1065052,1045608,"NSG","Native","FMT","14days","individual"]
[98,7190232,7040699,"NSG","Native","FMT","14days","cocage"]
[99,9561630,8857824,"NSG","Native","FMT","14days","cocage"]
[100,523588,511732,"NSG","Native","FMT","14days","cocage"]
[101,1478474,1433664,"NSG","Antibiotics","FMT","14days","individual"]
[102,3049108,2942294,"NSG","Antibiotics","FMT","14days","individual"]
[103,6455086,5930723,"NSG","Antibiotics","FMT","14days","individual"]
[104,2866304,2569695,"NSG","Antibiotics","FMT","14days","cocage"]
[105,2769668,2700329,"NSG","Antibiotics","FMT","14days","cocage"]
[106,3830742,3663237,"C57BL6","Native","FMT","14days","individual"]
[107,3109302,2655306,"C57BL6","Native","FMT","14days","individual"]
[108,2531888,2493582,"C57BL6","Native","FMT","14days","individual"]
[109,5672090,5379476,"C57BL6","Native","FMT","14days","cocage"]
[110,3480262,3138706,"C57BL6","Native","FMT","14days","cocage"]
[111,4102198,3719039,"C57BL6","Native","FMT","14days","cocage"]
[112,2462764,1965817,"C57BL6","Antibiotics","FMT","14days","individual"]
[113,2831734,2543097,"C57BL6","Antibiotics","FMT","14days","individual"]
[114,148345842,146735577,"C57BL6","Antibiotics","FMT","14days","individual"]
[115,8609562,8318263,"C57BL6","Antibiotics","FMT","14days","cocage"]
[116,3981932,3582982,"C57BL6","Antibiotics","FMT","14days","cocage"]
[117,10722336,10370228,"C57BL6","Antibiotics","FMT","14days","cocage"]
[118,5710914,5697876,"DONOR(combined)","-","-","-","-"]
[119,11399264,10008135,"NSG","Antibiotics","FMT","21days","individual"]
[120,11688096,11090977,"NSG","Antibiotics","FMT","21days","individual"]
[121,10038750,9402431,"NSG","Antibiotics","FMT","21days","individual"]
[122,10023136,8534244,"NSG","Antibiotics","FMT","21days","cocage"]
[123,10496148,8968924,"NSG","Antibiotics","FMT","21days","cocage"]
[124,11164580,9193765,"NSG","Native","FMT","21days","individual"]
[125,12493000,11344283,"NSG","Native","FMT","21days","individual"]
[126,11236612,10419793,"NSG","Native","FMT","21days","cocage"]
[127,11676948,10311769,"NSG","Native","FMT","21days","cocage"]
[128,8437562,7181955,"NSG","Native","FMT","21days","cocage"]
[129,12540832,11680945,"C57BL6","Antibiotics","FMT","21days","individual"]
[130,9623908,9221595,"C57BL6","Antibiotics","FMT","21days","individual"]
[131,13967816,12823358,"C57BL6","Antibiotics","FMT","21days","individual"]
[132,7921066,7721512,"C57BL6","Antibiotics","FMT","21days","cocage"]
[133,11745310,10242004,"C57BL6","Antibiotics","FMT","21days","cocage"]
[134,12732628,11608168,"C57BL6","Antibiotics","FMT","21days","cocage"]
[135,15560554,14464440,"C57BL6","Native","FMT","21days","individual"]
[136,13255604,11824878,"C57BL6","Native","FMT","21days","individual"]
[137,13466050,11451800,"C57BL6","Native","FMT","21days","individual"]
[138,13594768,12300486,"C57BL6","Native","FMT","21days","cocage"]
[139,16652050,15676800,"C57BL6","Native","FMT","21days","cocage"]
[140,11222452,9370975,"C57BL6","Native","FMT","21days","cocage"]
[141,7930026,7901576,"DONOR(individual1)","-","-","-","-"]
[142,12926056,12751790,"DONOR(individual2)","-","-","-","-"]
[143,8544908,8505316,"DONOR(individual3)","-","-","-","-"]
[144,10723944,10501369,"DONOR(individual4)","-","-","-","-"]
[145,11101250,10948910,"DONOR(individual5)","-","-","-","-"]
[146,12505896,12274686,"DONOR(individual6)","-","-","-","-"]