query position in query matching repeat position in repeat sequence begin end repeat class/family begin end chr1 112279 112315 (CTTT)n Simple_repeat 1 39 chr1 112696 112751 (CATCAG)n Simple_repeat 1 56 chr1 113247 113309 (ATT)n Simple_repeat 1 66 chr1 115129 115182 GA-rich Low_complexity 1 57 chr1 116786 116817 (TATA)n Simple_repeat 1 32 chr1 119328 119390 GA-rich Low_complexity 1 63 chr1 119502 119540 A-rich Low_complexity 1 39 chr1 124448 124481 A-rich Low_complexity 1 34 chr1 127114 127146 (TATATG)n Simple_repeat 1 34 chr1 127171 127206 (T)n Simple_repeat 1 36 chr1 128706 128735 (T)n Simple_repeat 1 30 chr1 131734 131858 GA-rich Low_complexity 1 130 chr1 132123 132161 A-rich Low_complexity 1 39 chr1 138715 138768 (ATTTA)n Simple_repeat 1 54 chr1 140514 140582 (CAT)n Simple_repeat 1 71 chr1 140552 140593 (AACAGC)n Simple_repeat 1 42 chr1 141914 141947 (TCCAAC)n Simple_repeat 1 34 chr1 142641 142697 (CTTTCCA)n Simple_repeat 1 62 chr1 143550 143576 A-rich Low_complexity 1 27 chr1 146743 146807 (AAAAAT)n Simple_repeat 1 65 chr1 148540 148578 (ATCCTC)n Simple_repeat 1 42 chr1 149478 149499 (CCT)n Simple_repeat 1 22 chr1 150620 150644 (TTTC)n Simple_repeat 1 26 chr1 151182 151201 (T)n Simple_repeat 1 20 chr1 151998 152039 (CAT)n Simple_repeat 1 42 chr1 152040 152083 A-rich Low_complexity 1 45 chr1 173733 173756 (T)n Simple_repeat 1 24 chr1 176611 176655 A-rich Low_complexity 1 47 chr1 194759 194801 (CATTA)n Simple_repeat 1 45 chr1 198317 198348 (A)n Simple_repeat 1 32 chr1 203582 203611 (A)n Simple_repeat 1 30 chr1 206470 206503 GA-rich Low_complexity 1 34 chr1 208794 208878 (TCACCA)n Simple_repeat 1 86 chr1 211209 211252 (TCT)n Simple_repeat 1 44 chr1 213162 213195 (ATCATG)n Simple_repeat 1 34 chr1 216854 216901 (TGCACTTGC)n Simple_repeat 1 48 chr1 217525 217564 (AATAA)n Simple_repeat 1 42 chr1 220639 220667 (AT)n Simple_repeat 1 30 chr1 223798 223823 (A)n Simple_repeat 1 26 chr1 227259 227295 (TTTTA)n Simple_repeat 1 38 chr1 233468 233498 (T)n Simple_repeat 1 31 chr1 237406 237442 (TTTAT)n Simple_repeat 1 38 chr1 238499 238526 (T)n Simple_repeat 1 28 chr1 240979 241033 (TATCAACTTC)n Simple_repeat 1 55 chr1 242442 242492 (AGTTA)n Simple_repeat 1 51 chr1 242643 242700 (AGAGAAGTTA)n Simple_repeat 1 61 chr1 244923 244983 (CTG)n Simple_repeat 1 61 chr1 246406 246436 (T)n Simple_repeat 1 31 chr1 249227 249245 (AT)n Simple_repeat 1 19 chr1 249247 249263 (T)n Simple_repeat 1 17 chr1 251425 251449 (A)n Simple_repeat 1 25 chr1 251568 251602 (T)n Simple_repeat 1 35 chr1 252858 252898 A-rich Low_complexity 1 41 chr1 270849 270897 (TTCTC)n Simple_repeat 1 54 chr1 273156 273221 (ATCTATA)n Simple_repeat 1 68 chr1 275236 275277 MamRTE1 LINE/RTE-BovB -1283 2529 chr1 285993 286009 (T)n Simple_repeat 1 17 chr1 289003 289033 (A)n Simple_repeat 1 31 chr1 299013 299041 (T)n Simple_repeat 1 29 chr1 312551 312576 (A)n Simple_repeat 1 26 chr1 315153 315206 (TATCTTACTA)n Simple_repeat 1 54 chr1 316195 316243 (TTCATCC)n Simple_repeat 1 50 chr1 316907 316957 (TTCTC)n Simple_repeat 1 54 chr1 317460 317551 (CTTCT)n Simple_repeat 1 98 chr1 317462 317549 (TCCTTC)n Simple_repeat 1 89 chr1 321898 321929 (TACT)n Simple_repeat 1 32 chr1 322032 322078 GA-rich Low_complexity 1 47 chr1 327759 327823 A-rich Low_complexity 1 64 chr1 328316 328351 A-rich Low_complexity 1 36 chr1 328798 328862 (CTG)n Simple_repeat 1 66 chr1 329569 329591 (T)n Simple_repeat 1 23 chr1 330893 330954 (TGTAGT)n Simple_repeat 1 62 chr1 331935 331990 (GAAAAGAGT)n Simple_repeat 1 56 chr1 332884 333119 (GTAA)n Simple_repeat 1 242 chr1 333708 333743 GA-rich Low_complexity 1 36 chr1 334119 334144 (GGA)n Simple_repeat 1 27 chr1 334381 334428 (GCGCCCG)n Simple_repeat 1 48 chr1 336382 336456 (AGCGCC)n Simple_repeat 1 77 chr1 340430 340456 (AAATGG)n Simple_repeat 1 27 chr1 340457 340550 A-rich Low_complexity 1 94 chr1 342541 342578 (TGCGGT)n Simple_repeat 1 38 chr1 342631 342681 (TGCGCC)n Simple_repeat 1 51 chr1 342821 342858 A-rich Low_complexity 1 38 chr1 343907 343980 A-rich Low_complexity 1 74 chr1 344314 344337 (T)n Simple_repeat 1 24 chr1 346028 346080 (CTT)n Simple_repeat 1 58 chr1 353461 353502 (TC)n Simple_repeat 1 44 chr1 379583 379691 A-rich Low_complexity 1 111 chr1 379626 379668 (ATA)n Simple_repeat 1 44 chr1 380594 380615 (A)n Simple_repeat 1 22 chr1 381981 382022 A-rich Low_complexity 1 42 chr1 387362 387421 (TTTTTA)n Simple_repeat 1 60 chr1 390203 390228 (T)n Simple_repeat 1 26 chr1 391933 391973 A-rich Low_complexity 1 41 chr1 399258 399274 (T)n Simple_repeat 1 17 chr1 402147 402219 (TTTTG)n Simple_repeat 1 77 chr1 403444 403490 (ATAAGA)n Simple_repeat 1 48 chr1 403555 403609 (TCTAT)n Simple_repeat 1 55 chr1 403590 403608 (T)n Simple_repeat 1 19 chr1 407055 407119 GA-rich Low_complexity 1 66 chr1 407315 407393 GA-rich Low_complexity 1 80 chr1 407394 407446 (GAT)n Simple_repeat 1 53 chr1 407792 407821 A-rich Low_complexity 1 30 chr1 420924 420977 (T)n Simple_repeat 1 54 chr1 421100 421154 (ATC)n Simple_repeat 1 58 chr1 422161 422216 A-rich Low_complexity 1 56 chr1 424419 424447 (T)n Simple_repeat 1 29 chr1 426604 426632 (A)n Simple_repeat 1 29 chr1 430243 430271 (TA)n Simple_repeat 1 30 chr1 431011 431032 (A)n Simple_repeat 1 22 chr1 432278 432307 (AAATA)n Simple_repeat 1 31 chr1 436069 436086 (T)n Simple_repeat 1 18 chr1 443283 443323 (GATGAA)n Simple_repeat 1 42 chr1 443569 443645 (TTTAT)n Simple_repeat 1 80 chr1 446574 446590 (A)n Simple_repeat 1 17 chr1 448205 448230 (TGCTGT)n Simple_repeat 1 26 chr1 448591 448618 (TTG)n Simple_repeat 1 28 chr1 452870 452919 (TCATCT)n Simple_repeat 1 50 chr1 465995 466022 (TCA)n Simple_repeat 1 28 chr1 466917 466948 (T)n Simple_repeat 1 32 chr1 474146 474171 (A)n Simple_repeat 1 26 chr1 474241 474290 (ATTTTT)n Simple_repeat 1 51 chr1 475615 475686 (GATGAT)n Simple_repeat 1 74 chr1 475901 475953 (ATG)n Simple_repeat 1 54 chr1 482028 482061 (TTCACA)n Simple_repeat 1 36 chr1 482204 482222 (A)n Simple_repeat 1 19 chr1 485941 485964 (A)n Simple_repeat 1 24 chr1 486133 486171 GA-rich Low_complexity 1 39 chr1 487831 487854 (CAG)n Simple_repeat 1 24 chr1 492225 492269 (CTTTGTT)n Simple_repeat 1 49 chr1 498277 498298 (A)n Simple_repeat 1 22 chr1 498632 498679 (TTC)n Simple_repeat 1 48 chr1 503970 504025 (TTCT)n Simple_repeat 1 56 chr1 511110 511133 (A)n Simple_repeat 1 24 chr1 515324 515340 (TA)n Simple_repeat 1 17 chr1 521157 521182 (CA)n Simple_repeat 1 26 chr1 521194 521247 A-rich Low_complexity 1 54 chr1 527803 527877 (TTTATT)n Simple_repeat 1 76 chr1 529629 529695 L3 LINE/CR1 -1898 2201 chr1 535840 536163 (CAT)n Simple_repeat 1 325 chr1 537957 537991 (TCT)n Simple_repeat 1 35 chr1 538800 538829 A-rich Low_complexity 1 30 chr1 540429 540484 (CTTTTAT)n Simple_repeat 1 58 chr1 546645 546678 (ATCTTC)n Simple_repeat 1 37 chr1 551648 551716 (TTC)n Simple_repeat 1 70 chr1 552112 552128 (T)n Simple_repeat 1 17 chr1 563338 563366 (T)n Simple_repeat 1 29 chr1 563954 563982 A-rich Low_complexity 1 31 chr1 582297 582339 A-rich Low_complexity 1 47 chr1 586158 586190 A-rich Low_complexity 1 34 chr1 589849 589894 (TATTTT)n Simple_repeat 1 47 chr1 595694 595728 (AAT)n Simple_repeat 1 37 chr1 597635 597654 (A)n Simple_repeat 1 20 chr1 600661 600746 GA-rich Low_complexity 1 93 chr1 600935 600962 A-rich Low_complexity 1 28 chr1 601567 601599 (TGT)n Simple_repeat 1 34 chr1 601600 601657 (TGC)n Simple_repeat 1 59 chr1 602435 602486 (TAGCAT)n Simple_repeat 1 55 chr1 603211 603232 (GAT)n Simple_repeat 1 22 chr1 603663 603747 (TTTTC)n Simple_repeat 1 88 chr1 603685 603739 (T)n Simple_repeat 1 55 chr1 607686 607739 GA-rich Low_complexity 1 57 chr1 614580 614604 (T)n Simple_repeat 1 25 chr1 622013 622042 (TTGT)n Simple_repeat 1 30 chr1 623762 623828 (TTTTA)n Simple_repeat 1 67 chr1 631554 631592 (AAATA)n Simple_repeat 1 36 chr1 631628 631645 (A)n Simple_repeat 1 18 chr1 634232 634270 (ATC)n Simple_repeat 1 39 chr1 634993 635016 (T)n Simple_repeat 1 24 chr1 640179 640235 (TTTTA)n Simple_repeat 1 58 chr1 642166 642196 A-rich Low_complexity 1 31 chr1 643134 643157 (GAG)n Simple_repeat 1 24 chr1 649631 649669 (TCATCA)n Simple_repeat 1 39 chr1 650012 650045 (A)n Simple_repeat 1 34 chr1 652407 652441 A-rich Low_complexity 1 35 chr1 653687 653716 (ATTTTC)n Simple_repeat 1 30 chr1 654465 654491 (TA)n Simple_repeat 1 28 chr1 656370 656401 (T)n Simple_repeat 1 32 chr1 662770 662794 (A)n Simple_repeat 1 25 chr1 669831 669869 (TCATTTT)n Simple_repeat 1 39 chr1 671646 671680 (CTTTT)n Simple_repeat 1 35 chr1 673118 673158 (TTTTCA)n Simple_repeat 1 42 chr1 673536 673617 (CTTT)n Simple_repeat 1 85 chr1 673556 673592 (T)n Simple_repeat 1 37 chr1 675107 675188 (TCT)n Simple_repeat 1 82 chr1 690456 690479 (T)n Simple_repeat 1 24 chr1 694999 695094 MIRc SINE/MIR -71 197 chr1 697325 697363 A-rich Low_complexity 1 39 chr1 700368 700440 (ATG)n Simple_repeat 1 76 chr1 704023 704066 (ATG)n Simple_repeat 1 44 chr1 705170 705199 A-rich Low_complexity 1 30 chr1 708703 708731 (GCT)n Simple_repeat 1 29 chr1 711300 711349 (AATAA)n Simple_repeat 1 51 chr1 715940 715962 (TCCT)n Simple_repeat 1 24 chr1 718312 718343 (TTTCA)n Simple_repeat 1 33 chr1 719815 719834 (T)n Simple_repeat 1 20 chr1 722115 722143 (TTC)n Simple_repeat 1 29 chr1 723042 723068 (A)n Simple_repeat 1 27 chr1 723288 723344 (TTCCTT)n Simple_repeat 1 59 chr1 730020 730044 (A)n Simple_repeat 1 25 chr1 731146 731177 GA-rich Low_complexity 1 33 chr1 736539 736557 (T)n Simple_repeat 1 19 chr1 748006 748130 (TTTCCT)n Simple_repeat 1 125 chr1 759247 759282 (TCTTCC)n Simple_repeat 1 37 chr1 777993 778050 tRNA-Phe-TTY tRNA 8 65 chr1 783350 783396 A-rich Low_complexity 1 49 chr1 788333 788361 (TTTA)n Simple_repeat 1 29 chr1 788489 788513 (TTTAT)n Simple_repeat 1 26 chr1 794661 794687 (AT)n Simple_repeat 1 28 chr1 802067 802109 (ATTATC)n Simple_repeat 1 43 chr1 802082 802107 (ATT)n Simple_repeat 1 26 chr1 809128 809164 (TCTTTCC)n Simple_repeat 1 40 chr1 818170 818233 (CATTTTA)n Simple_repeat 1 65 chr1 825377 825416 (TTACCTTT)n Simple_repeat 1 44 chr1 826013 826034 (ATTT)n Simple_repeat 1 23 chr1 831745 831797 (AACAA)n Simple_repeat 1 53 chr1 832133 832167 A-rich Low_complexity 1 36 chr1 838220 838265 (TCATCC)n Simple_repeat 1 46 chr1 838249 838285 (TTC)n Simple_repeat 1 38 chr1 850738 850770 (TTATA)n Simple_repeat 1 35 chr1 851942 851976 (TTGTGCA)n Simple_repeat 1 36 chr1 855158 855226 A-rich Low_complexity 1 69 chr1 858543 858577 (TAA)n Simple_repeat 1 35 chr1 859595 859624 (AAT)n Simple_repeat 1 30 chr1 860070 860148 (CGCAGG)n Simple_repeat 1 82 chr1 860275 860306 (GCA)n Simple_repeat 1 32 chr1 861168 861199 (CTCTT)n Simple_repeat 1 32 chr1 864178 864226 (TTTCCT)n Simple_repeat 1 52 chr1 865295 865339 G-rich Low_complexity 1 45 chr1 868931 869042 A-rich Low_complexity 1 112 chr1 869805 869935 (CTGCGC)n Simple_repeat 1 127 chr1 870476 870676 (CATTT)n Simple_repeat 1 210 chr1 871000 871033 A-rich Low_complexity 1 34 chr1 871744 871784 (TTTTCTT)n Simple_repeat 1 41 chr1 871926 871957 A-rich Low_complexity 1 35 chr1 871965 871996 (TAAA)n Simple_repeat 1 32 chr1 872346 872383 A-rich Low_complexity 1 39 chr1 873061 873115 A-rich Low_complexity 1 56 chr1 873726 873761 (TAATT)n Simple_repeat 1 37 chr1 874661 874698 A-rich Low_complexity 1 38 chr1 875583 875655 A-rich Low_complexity 1 73 chr1 875862 875988 GA-rich Low_complexity 1 130 chr1 885662 885729 (TGC)n Simple_repeat 1 69 chr1 886340 886371 (AAAAT)n Simple_repeat 1 32 chr1 889677 889793 (GAT)n Simple_repeat 1 120 chr1 890372 890393 (AGCA)n Simple_repeat 1 24 chr1 898176 898248 tRNA-Ala-GCY_ tRNA 1 72 chr1 898662 898700 (CAT)n Simple_repeat 1 39 chr1 907297 907330 A-rich Low_complexity 1 34 chr1 910677 910729 A-rich Low_complexity 1 53 chr1 912243 912285 (TCTTCTCCT)n Simple_repeat 1 43 chr1 912536 912609 (TCATCT)n Simple_repeat 1 74 chr1 916016 916050 (GACGAT)n Simple_repeat 1 35 chr1 917986 918046 A-rich Low_complexity 1 64 chr1 918284 918302 (T)n Simple_repeat 1 19 chr1 918322 918377 A-rich Low_complexity 1 56 chr1 919570 919652 (AAATCCAGG)n Simple_repeat 1 85 chr1 922282 922602 (ACATTTA)n Simple_repeat 1 325 chr1 924971 925003 (GATATG)n Simple_repeat 1 36 chr1 926977 927029 (GCGCTA)n Simple_repeat 1 56 chr1 928637 928673 (CAGACG)n Simple_repeat 1 37 chr1 930969 931085 (TTGTAT)n Simple_repeat 1 120 chr1 932094 932134 (ATCCTCC)n Simple_repeat 1 42 chr1 936860 936926 GA-rich Low_complexity 1 67 chr1 939989 940041 (TCAATTT)n Simple_repeat 1 54 chr1 942093 942138 (CTTT)n Simple_repeat 1 46 chr1 943254 943320 (AATAT)n Simple_repeat 1 68 chr1 952110 952132 (TGG)n Simple_repeat 1 23 chr1 952222 952238 (GGT)n Simple_repeat 1 17 chr1 957266 957300 (GAGTTA)n Simple_repeat 1 35 chr1 959985 960036 (CTAATAT)n Simple_repeat 1 53 chr1 967532 967557 (TTTG)n Simple_repeat 1 26 chr1 975890 975952 tRNA-His-CAY_ tRNA -3 72 chr1 979906 979926 (T)n Simple_repeat 1 21 chr1 992129 992197 GA-rich Low_complexity 1 74 chr1 992666 992708 GA-rich Low_complexity 1 45 chr1 996754 996865 (CTGCTT)n Simple_repeat 1 115 chr1 997349 997374 (T)n Simple_repeat 1 26 chr1 1000795 1000837 MamRTE1 LINE/RTE-BovB 3225 3269 chr1 1010483 1010521 A-rich Low_complexity 1 39 chr1 1011444 1011469 (TTCTT)n Simple_repeat 1 26 chr1 1023275 1023342 A-rich Low_complexity 1 68 chr1 1024493 1024534 A-rich Low_complexity 1 42 chr1 1025007 1025026 (A)n Simple_repeat 1 20 chr1 1042612 1042639 L2 LINE/L2 -516 2903 chr1 1049419 1049483 A-rich Low_complexity 1 66 chr1 1053915 1053987 (GTT)n Simple_repeat 1 73 chr1 1059007 1059023 (T)n Simple_repeat 1 17 chr1 1063663 1063696 A-rich Low_complexity 1 34 chr1 1081100 1081153 (ATT)n Simple_repeat 1 54 chr1 1082038 1082056 (T)n Simple_repeat 1 19 chr1 1096742 1096777 (CTTTTT)n Simple_repeat 1 38 chr1 1096743 1096775 (T)n Simple_repeat 1 33 chr1 1109561 1109634 U6 snRNA 5 81 chr1 1111686 1111743 A-rich Low_complexity 1 58 chr1 1112734 1112758 (T)n Simple_repeat 1 25 chr1 1114653 1114687 A-rich Low_complexity 1 35 chr1 1120337 1120367 (TTAAT)n Simple_repeat 1 31 chr1 1125421 1125447 (TTATT)n Simple_repeat 1 27 chr1 1126372 1126389 (T)n Simple_repeat 1 18 chr1 1128131 1128160 GA-rich Low_complexity 1 30 chr1 1134385 1134431 (TCTTCC)n Simple_repeat 1 47 chr1 1142719 1142764 (ATG)n Simple_repeat 1 46 chr1 1145413 1145470 (TGG)n Simple_repeat 1 58 chr1 1146564 1146585 (TTTA)n Simple_repeat 1 23 chr1 1149739 1149764 (ATT)n Simple_repeat 1 27 chr1 1150131 1150230 (TCA)n Simple_repeat 1 100 chr1 1152376 1152405 (A)n Simple_repeat 1 30 chr1 1153720 1153776 (TA)n Simple_repeat 1 61 chr1 1154087 1154126 (TTTATC)n Simple_repeat 1 40 chr1 1156625 1156688 A-rich Low_complexity 1 64 chr1 1158920 1158951 (AACAAG)n Simple_repeat 1 32 chr1 1174911 1174969 A-rich Low_complexity 1 56 chr1 1176503 1176536 A-rich Low_complexity 1 34 chr1 1176974 1177018 (TGAT)n Simple_repeat 1 45 chr1 1178088 1178126 (TGC)n Simple_repeat 1 40 chr1 1179569 1179588 (A)n Simple_repeat 1 20 chr1 1181900 1181955 (GCATTT)n Simple_repeat 1 61 chr1 1184348 1184381 (AGAACC)n Simple_repeat 1 34 chr1 1185151 1185187 A-rich Low_complexity 1 38 chr1 1185635 1185663 A-rich Low_complexity 1 29 chr1 1194886 1194924 (TATAC)n Simple_repeat 1 40 chr1 1196876 1196900 (TAT)n Simple_repeat 1 25 chr1 1200046 1200066 (A)n Simple_repeat 1 21 chr1 1202261 1202356 (TTTT)n Simple_repeat 1 96 chr1 1204486 1204545 (AATCAA)n Simple_repeat 1 60 chr1 1204947 1205028 A-rich Low_complexity 1 94 chr1 1205568 1205613 (GGCCCC)n Simple_repeat 1 46 chr1 1205647 1205673 (AAG)n Simple_repeat 1 27 chr1 1208500 1208533 (T)n Simple_repeat 1 34 chr1 1209871 1209917 (TGTTGT)n Simple_repeat 1 47 chr1 1212869 1212885 (T)n Simple_repeat 1 17 chr1 1216393 1216416 (A)n Simple_repeat 1 24 chr1 1220005 1220047 (AATA)n Simple_repeat 1 44 chr1 1232532 1232579 (CAGCAA)n Simple_repeat 1 49 chr1 1232586 1232618 (CAA)n Simple_repeat 1 33 chr1 1234243 1234281 A-rich Low_complexity 1 40 chr1 1234609 1234656 A-rich Low_complexity 1 48 chr1 1237335 1237358 (GT)n Simple_repeat 1 24 chr1 1241331 1241359 (T)n Simple_repeat 1 29 chr1 1243497 1243542 A-rich Low_complexity 1 47 chr1 1243504 1243534 (A)n Simple_repeat 1 31 chr1 1246306 1246354 (TTTTCT)n Simple_repeat 1 49 chr1 1251896 1251920 (T)n Simple_repeat 1 25 chr1 1251959 1252014 (GAGATTT)n Simple_repeat 1 60 chr1 1254830 1254899 (CTACTTA)n Simple_repeat 1 66 chr1 1256416 1256472 GA-rich Low_complexity 1 58 chr1 1258201 1258235 A-rich Low_complexity 1 35 chr1 1259051 1259103 A-rich Low_complexity 1 55 chr1 1262256 1262319 GA-rich Low_complexity 1 64 chr1 1266215 1266244 (TTG)n Simple_repeat 1 30 chr1 1268649 1268695 A-rich Low_complexity 1 47 chr1 1269864 1269885 (AT)n Simple_repeat 1 22 chr1 1275665 1275712 (TTGCATAGA)n Simple_repeat 1 48 chr1 1277873 1277926 (CCTCCT)n Simple_repeat 1 55 chr1 1278210 1278246 (CTT)n Simple_repeat 1 37 chr1 1278635 1278687 (TGATGA)n Simple_repeat 1 54 chr1 1279167 1279191 (T)n Simple_repeat 1 25 chr1 1282606 1282629 (T)n Simple_repeat 1 24 chr1 1284341 1284382 (GAGCA)n Simple_repeat 1 43 chr1 1284486 1284534 (ATCT)n Simple_repeat 1 49 chr1 1286995 1287036 A-rich Low_complexity 1 42 chr1 1301546 1301605 (AT)n Simple_repeat 1 64 chr1 1304192 1304217 (TGATT)n Simple_repeat 1 27 chr1 1306211 1306258 A-rich Low_complexity 1 50 chr1 1313017 1313061 (ACCCGC)n Simple_repeat 1 48 chr1 1313494 1313541 (CTGCTG)n Simple_repeat 1 49 chr1 1314046 1314099 (TGCCGC)n Simple_repeat 1 55 chr1 1316528 1316550 (A)n Simple_repeat 1 23 chr1 1316713 1316760 GA-rich Low_complexity 1 49 chr1 1317654 1317679 (T)n Simple_repeat 1 26 chr1 1329129 1329156 (GCA)n Simple_repeat 1 28 chr1 1330460 1330485 (T)n Simple_repeat 1 26 chr1 1331648 1331676 (GAA)n Simple_repeat 1 29 chr1 1335311 1335348 (CTTA)n Simple_repeat 1 38 chr1 1345513 1345581 (TGTTGA)n Simple_repeat 1 71 chr1 1346858 1346949 A-rich Low_complexity 1 94 chr1 1350186 1350228 (TCTTTA)n Simple_repeat 1 48 chr1 1353054 1353083 (TGA)n Simple_repeat 1 30 chr1 1363711 1363742 A-rich Low_complexity 1 33 chr1 1364199 1364227 (TTTA)n Simple_repeat 1 30 chr1 1377277 1377304 (AGTA)n Simple_repeat 1 28 chr1 1379997 1380070 A-rich Low_complexity 1 82 chr1 1380313 1380398 (AACAA)n Simple_repeat 1 87 chr1 1382686 1382722 (TTC)n Simple_repeat 1 38 chr1 1382687 1382719 (TCTTCA)n Simple_repeat 1 33 chr1 1383043 1383102 A-rich Low_complexity 1 60 chr1 1383966 1383996 (TTGAA)n Simple_repeat 1 31 chr1 1393973 1394001 (TTC)n Simple_repeat 1 29 chr1 1397863 1397926 A-rich Low_complexity 1 67 chr1 1397964 1398006 (AATA)n Simple_repeat 1 43 chr1 1400757 1400823 (TTG)n Simple_repeat 1 67 chr1 1401204 1401268 (TGC)n Simple_repeat 1 67 chr1 1420699 1420740 A-rich Low_complexity 1 44 chr1 1422283 1422342 (TGTTGA)n Simple_repeat 1 60 chr1 1422853 1422900 A-rich Low_complexity 1 49 chr1 1423019 1423048 (AATC)n Simple_repeat 1 31 chr1 1423516 1423564 A-rich Low_complexity 1 50 chr1 1423895 1423966 (AAAAT)n Simple_repeat 1 72 chr1 1424388 1424427 (TATTCA)n Simple_repeat 1 41 chr1 1424847 1424875 A-rich Low_complexity 1 29 chr1 1424909 1424940 A-rich Low_complexity 1 32 chr1 1429601 1429634 (CTCCTT)n Simple_repeat 1 34 chr1 1430145 1430168 (TCA)n Simple_repeat 1 24 chr1 1431441 1431479 (TTTTCC)n Simple_repeat 1 39 chr1 1434405 1434502 (ATGAGA)n Simple_repeat 1 99 chr1 1435634 1435650 (T)n Simple_repeat 1 17 chr1 1438653 1438959 (TTTGCA)n Simple_repeat 1 307 chr1 1439213 1439275 (CATTTG)n Simple_repeat 1 64 chr1 1442807 1442893 A-rich Low_complexity 1 89 chr1 1444200 1444255 A-rich Low_complexity 1 59 chr1 1448124 1448142 (A)n Simple_repeat 1 19 chr1 1460559 1460580 (T)n Simple_repeat 1 22 chr1 1467387 1467451 (TCT)n Simple_repeat 1 66 chr1 1469086 1469124 A-rich Low_complexity 1 39 chr1 1470487 1470548 (ATCCTC)n Simple_repeat 1 63 chr1 1480043 1480105 tRNA-His-CAY_ tRNA 10 72 chr1 1480129 1480177 (TTA)n Simple_repeat 1 52 chr1 1489700 1489746 (TTTTA)n Simple_repeat 1 48 chr1 1494094 1494166 (ATATTTT)n Simple_repeat 1 74 chr1 1496338 1496372 A-rich Low_complexity 1 35 chr1 1506487 1506536 (TAT)n Simple_repeat 1 50 chr1 1511991 1512033 (TTTCTTA)n Simple_repeat 1 44 chr1 1517746 1517777 (TTA)n Simple_repeat 1 32 chr1 1528197 1528227 (GATTAT)n Simple_repeat 1 31 chr1 1528300 1528318 (CTT)n Simple_repeat 1 19 chr1 1531270 1531292 (TA)n Simple_repeat 1 23 chr1 1532963 1533005 (TTT)n Simple_repeat 1 43 chr1 1532992 1533028 (TC)n Simple_repeat 1 38 chr1 1533668 1533700 (TTTTA)n Simple_repeat 1 35 chr1 1534705 1534735 (T)n Simple_repeat 1 31 chr1 1561646 1561701 tRNA-Val-GTA tRNA 7 61 chr1 1571636 1571672 A-rich Low_complexity 1 37 chr1 1585162 1585210 (ATTATC)n Simple_repeat 1 49 chr1 1587184 1587216 (TTG)n Simple_repeat 1 33 chr1 1587622 1587651 (GTT)n Simple_repeat 1 30 chr1 1587990 1588017 (TGT)n Simple_repeat 1 28 chr1 1588221 1588242 (TGT)n Simple_repeat 1 22 chr1 1589690 1589719 A-rich Low_complexity 1 30 chr1 1589917 1589952 A-rich Low_complexity 1 38 chr1 1591179 1591204 (AAG)n Simple_repeat 1 26 chr1 1592730 1592756 (T)n Simple_repeat 1 27 chr1 1596681 1596714 (TCCATC)n Simple_repeat 1 34 chr1 1604394 1604434 (CATCAT)n Simple_repeat 1 41 chr1 1606588 1606664 (TCCTTC)n Simple_repeat 1 86 chr1 1618735 1618819 (ATTGAAT)n Simple_repeat 1 89 chr1 1619187 1619224 (AATAA)n Simple_repeat 1 38 chr1 1625759 1625793 (TTTTTC)n Simple_repeat 1 35 chr1 1627495 1627551 A-rich Low_complexity 1 60 chr1 1629043 1629077 (CAATCT)n Simple_repeat 1 35 chr1 1629851 1629870 (A)n Simple_repeat 1 20 chr1 1634742 1634830 (ATGAAAGAA)n Simple_repeat 1 89 chr1 1640117 1640294 A-rich Low_complexity 1 178 chr1 1641161 1641221 (CGGCGCG)n Simple_repeat 1 63 chr1 1642739 1642772 (AATGCA)n Simple_repeat 1 34 chr1 1642773 1642854 (CAAATC)n Simple_repeat 1 83 chr1 1643248 1643368 A-rich Low_complexity 1 123 chr1 1643450 1643500 (AAGAGATG)n Simple_repeat 1 54 chr1 1646874 1647047 L1MEd LINE/L1 1996 2142 chr1 1655306 1655349 (CATAGTT)n Simple_repeat 1 50 chr1 1658023 1658065 (CGTACA)n Simple_repeat 1 43 chr1 1662026 1662055 (T)n Simple_repeat 1 30 chr1 1665474 1665507 (ATCTTC)n Simple_repeat 1 34 chr1 1666532 1666588 (CATCTACTT)n Simple_repeat 1 60 chr1 1669374 1669437 (ATCA)n Simple_repeat 1 64 chr1 1671566 1671604 (ACACTTC)n Simple_repeat 1 39 chr1 1673855 1673929 (TTCT)n Simple_repeat 1 75 chr1 1674020 1674052 (TATTT)n Simple_repeat 1 33 chr1 1679347 1679394 (TTTTCCC)n Simple_repeat 1 48 chr1 1683373 1683400 (AGA)n Simple_repeat 1 29 chr1 1686391 1686442 GA-rich Low_complexity 1 52 chr1 1688881 1688916 (T)n Simple_repeat 1 36 chr1 1693884 1693937 (GAT)n Simple_repeat 1 54 chr1 1694874 1694907 A-rich Low_complexity 1 34 chr1 1701511 1701577 GA-rich Low_complexity 1 70 chr1 1703497 1703540 GA-rich Low_complexity 1 45 chr1 1704053 1704082 GA-rich Low_complexity 1 31 chr1 1704093 1704116 (CAT)n Simple_repeat 1 24 chr1 1704913 1705027 GA-rich Low_complexity 1 118 chr1 1708146 1708207 (TTCCCAC)n Simple_repeat 1 62 chr1 1712804 1712851 (GAT)n Simple_repeat 1 48 chr1 1715689 1715731 (TTTATT)n Simple_repeat 1 44 chr1 1718705 1718728 (T)n Simple_repeat 1 24 chr1 1722986 1723034 A-rich Low_complexity 1 51 chr1 1723833 1723864 (GATGAA)n Simple_repeat 1 32 chr1 1724071 1724107 (TGA)n Simple_repeat 1 38 chr1 1724705 1724756 GA-rich Low_complexity 1 53 chr1 1730391 1730434 (GAATGTG)n Simple_repeat 1 44 chr1 1730657 1730674 (T)n Simple_repeat 1 18 chr1 1735071 1735108 (TTCAT)n Simple_repeat 1 38 chr1 1737737 1737815 (GATGAA)n Simple_repeat 1 84 chr1 1737768 1737805 GA-rich Low_complexity 1 41 chr1 1737856 1737917 A-rich Low_complexity 1 62 chr1 1743839 1743868 (A)n Simple_repeat 1 30 chr1 1749182 1749204 (T)n Simple_repeat 1 23 chr1 1750259 1750304 (TTTGCAG)n Simple_repeat 1 48 chr1 1755248 1755274 (A)n Simple_repeat 1 27 chr1 1756105 1756133 (T)n Simple_repeat 1 29 chr1 1756163 1756187 (T)n Simple_repeat 1 25 chr1 1763545 1763583 A-rich Low_complexity 1 39 chr1 1765874 1765915 (CA)n Simple_repeat 1 42 chr1 1766246 1766287 (CTTG)n Simple_repeat 1 42 chr1 1769935 1769975 (GAT)n Simple_repeat 1 41 chr1 1771280 1771303 (TTCAC)n Simple_repeat 1 26 chr1 1775977 1776006 (A)n Simple_repeat 1 30 chr1 1777241 1777259 (T)n Simple_repeat 1 19 chr1 1778705 1778734 (CCAAG)n Simple_repeat 1 30 chr1 1781644 1781677 (A)n Simple_repeat 1 34 chr1 1785158 1785199 (TATTCTAGA)n Simple_repeat 1 43 chr1 1785697 1785793 (AACGAA)n Simple_repeat 1 98 chr1 1786297 1786320 (TGC)n Simple_repeat 1 24 chr1 1786354 1786397 (TGTTGCTGT)n Simple_repeat 1 44 chr1 1789426 1789481 A-rich Low_complexity 1 57 chr1 1789433 1789472 (GAGAAAG)n Simple_repeat 1 41 chr1 1797338 1797365 GA-rich Low_complexity 1 29 chr1 1797928 1797961 (CAAGCG)n Simple_repeat 1 37 chr1 1801795 1801837 (AAGAAC)n Simple_repeat 1 45 chr1 1804541 1804583 (ACTAGAAACC)n Simple_repeat 1 43 chr1 1806693 1806734 (TT)n Simple_repeat 1 42 chr1 1807158 1807198 A-rich Low_complexity 1 41 chr1 1807662 1807690 (CTTTT)n Simple_repeat 1 29 chr1 1807836 1807868 (A)n Simple_repeat 1 33 chr1 1808973 1809016 A-rich Low_complexity 1 44 chr1 1811900 1811964 GA-rich Low_complexity 1 69 chr1 1816560 1816666 (A)n Simple_repeat 1 107 chr1 1816971 1817049 (GATAAATGGT)n Simple_repeat 1 79 chr1 1817408 1817452 (ATGAATT)n Simple_repeat 1 45 chr1 1824000 1824064 A-rich Low_complexity 1 69 chr1 1826301 1826342 (ACCATAC)n Simple_repeat 1 46 chr1 1826402 1826459 (TACA)n Simple_repeat 1 58 chr1 1826959 1827010 (ATATG)n Simple_repeat 1 52 chr1 1830991 1831029 (TC)n Simple_repeat 1 40 chr1 1832592 1832621 (TTTTCA)n Simple_repeat 1 30 chr1 1838835 1838865 (T)n Simple_repeat 1 31 chr1 1838956 1838986 (TCCT)n Simple_repeat 1 31 chr1 1844064 1844101 (TTTCCTT)n Simple_repeat 1 38 chr1 1846900 1846931 (TTTC)n Simple_repeat 1 34 chr1 1847666 1847707 (TTC)n Simple_repeat 1 43 chr1 1848991 1849041 (TGCTAA)n Simple_repeat 1 61 chr1 1849042 1849115 (TGCTAATGT)n Simple_repeat 1 81 chr1 1849116 1849174 (TGCTAA)n Simple_repeat 2 66 chr1 1849753 1849794 (TCTTT)n Simple_repeat 1 42 chr1 1849755 1849793 (CTT)n Simple_repeat 1 42 chr1 1851775 1851847 (TAATAA)n Simple_repeat 1 73 chr1 1861669 1861690 (A)n Simple_repeat 1 22 chr1 1862729 1862816 (AGATGA)n Simple_repeat 1 91 chr1 1864582 1864652 GA-rich Low_complexity 1 71 chr1 1867950 1868008 L3 LINE/CR1 392 446 chr1 1913963 1913982 (ATA)n Simple_repeat 1 20 chr1 1913984 1914003 (T)n Simple_repeat 1 20 chr1 1918417 1918500 GA-rich Low_complexity 1 90 chr1 1922823 1922866 (TCATCC)n Simple_repeat 1 44 chr1 1923048 1923107 (TCA)n Simple_repeat 1 60 chr1 1926871 1926917 (GAT)n Simple_repeat 1 47 chr1 1927425 1927452 A-rich Low_complexity 1 28 chr1 1934180 1934199 (AGA)n Simple_repeat 1 20 chr1 1934345 1934513 GA-rich Low_complexity 1 169 chr1 1934529 1934592 (AAGATG)n Simple_repeat 1 64 chr1 1934841 1934889 GA-rich Low_complexity 1 51 chr1 1941077 1941114 (TGT)n Simple_repeat 1 38 chr1 1944489 1944511 (A)n Simple_repeat 1 23 chr1 1944934 1944957 (AGGCT)n Simple_repeat 1 27 chr1 1948550 1948624 tRNA-Ala-GCY_ tRNA -1 74 chr1 1951296 1951318 (T)n Simple_repeat 1 23 chr1 1951439 1951457 (A)n Simple_repeat 1 19 chr1 1955252 1955311 GA-rich Low_complexity 1 62 chr1 1956380 1956420 (CTCTTT)n Simple_repeat 1 42 chr1 1957627 1957664 (AT)n Simple_repeat 1 40 chr1 1958906 1958936 (ACAAAC)n Simple_repeat 1 31 chr1 1966243 1966290 (TGC)n Simple_repeat 1 48 chr1 1971902 1971944 A-rich Low_complexity 1 43 chr1 1975211 1975245 (TTATTT)n Simple_repeat 1 35 chr1 1978755 1978788 (T)n Simple_repeat 1 34 chr1 1979256 1979295 A-rich Low_complexity 1 40 chr1 1981392 1981462 MamRTE1 LINE/RTE-BovB 3201 3272 chr1 1982500 1982602 (ATGAAG)n Simple_repeat 1 103 chr1 1987080 1987108 (A)n Simple_repeat 1 29 chr1 1992879 1992915 A-rich Low_complexity 1 37 chr1 1993219 1993246 (TTTA)n Simple_repeat 1 28 chr1 1995224 1995277 (GAT)n Simple_repeat 1 54 chr1 2000276 2000305 A-rich Low_complexity 1 31 chr1 2003501 2003689 (TACTTCA)n Simple_repeat 1 198 chr1 2009177 2009219 (ATTTTC)n Simple_repeat 1 44 chr1 2009635 2009697 (CTGCTTT)n Simple_repeat 1 69 chr1 2009738 2009775 (CTTATCCTC)n Simple_repeat 1 40 chr1 2013631 2013703 (GATGAG)n Simple_repeat 1 75 chr1 2017063 2017099 (CCTCCA)n Simple_repeat 1 38 chr1 2018231 2018301 (CTTCGG)n Simple_repeat 1 74 chr1 2018703 2018766 (TGTTCA)n Simple_repeat 1 64 chr1 2018787 2018860 (TGTTCA)n Simple_repeat 1 81 chr1 2019638 2019671 A-rich Low_complexity 1 34 chr1 2020442 2020502 A-rich Low_complexity 1 62 chr1 2021228 2021244 (T)n Simple_repeat 1 17 chr1 2021867 2021925 A-rich Low_complexity 1 59 chr1 2022572 2022615 (TTTTA)n Simple_repeat 1 43 chr1 2022616 2022655 (TTTTTA)n Simple_repeat 1 40 chr1 2022656 2022681 (TTTTA)n Simple_repeat 4 28 chr1 2029301 2029384 (TTATCC)n Simple_repeat 1 84 chr1 2030043 2030087 (GCTGCA)n Simple_repeat 1 48 chr1 2030500 2030624 (TCTTTAG)n Simple_repeat 1 126 chr1 2031569 2031635 (TCCTTTA)n Simple_repeat 1 69 chr1 2034854 2034873 (A)n Simple_repeat 1 20 chr1 2038330 2038395 A-rich Low_complexity 1 69 chr1 2044567 2044604 A-rich Low_complexity 1 38 chr1 2051572 2051604 (TCACTG)n Simple_repeat 1 33 chr1 2058671 2058693 (T)n Simple_repeat 1 23 chr1 2058814 2058839 (T)n Simple_repeat 1 26 chr1 2059140 2059204 (AAAAT)n Simple_repeat 1 67 chr1 2068590 2068620 (T)n Simple_repeat 1 31 chr1 2070169 2070208 (TTA)n Simple_repeat 1 42 chr1 2072121 2072225 (TTATTTA)n Simple_repeat 1 109 chr1 2075532 2075573 (TGATGAG)n Simple_repeat 1 43 chr1 2075627 2075768 (AGAGATG)n Simple_repeat 1 147 chr1 2079257 2079365 A-rich Low_complexity 1 113 chr1 2079534 2079595 A-rich Low_complexity 1 62 chr1 2081503 2081537 (TTTATC)n Simple_repeat 1 36 chr1 2081579 2081615 (T)n Simple_repeat 1 37 chr1 2082325 2082370 L3 LINE/CR1 3188 3231 chr1 2097798 2097842 (TTTTA)n Simple_repeat 1 45 chr1 2101619 2101643 (CTT)n Simple_repeat 1 25 chr1 2132706 2132765 (CAGCAA)n Simple_repeat 1 60 chr1 2132766 2132794 (CAG)n Simple_repeat 1 29 chr1 2132795 2132819 (CAGCAA)n Simple_repeat 1 26 chr1 2133113 2133141 (T)n Simple_repeat 1 29 chr1 2134439 2134461 (CTC)n Simple_repeat 1 23 chr1 2138346 2138380 (ATGAAG)n Simple_repeat 1 36 chr1 2141863 2141886 (TCT)n Simple_repeat 1 24 chr1 2141932 2141954 (TCC)n Simple_repeat 1 23 chr1 2142167 2142210 GA-rich Low_complexity 1 48 chr1 2146539 2146589 MamRTE1 LINE/RTE-BovB -1512 2300 chr1 2150546 2150586 (ACAGGTGCC)n Simple_repeat 1 41 chr1 2153189 2153264 (AGCATAGTAA)n Simple_repeat 1 83 chr1 2153395 2153432 (GTAAACATA)n Simple_repeat 1 38 chr1 2153877 2153896 (T)n Simple_repeat 1 20 chr1 2160489 2160540 (TATTTC)n Simple_repeat 1 54 chr1 2163528 2163668 (TCATCC)n Simple_repeat 1 146 chr1 2164730 2164768 A-rich Low_complexity 1 39 chr1 2169822 2169846 (T)n Simple_repeat 1 25 chr1 2170735 2170765 (GTAGT)n Simple_repeat 1 32 chr1 2178591 2178625 (T)n Simple_repeat 1 35 chr1 2181098 2181130 (ACTG)n Simple_repeat 1 34 chr1 2186128 2186146 (T)n Simple_repeat 1 19 chr1 2187693 2187769 (TTAGTTC)n Simple_repeat 1 86 chr1 2191233 2191259 (T)n Simple_repeat 1 27 chr1 2192559 2192614 A-rich Low_complexity 1 55 chr1 2194569 2194612 (GAGTTT)n Simple_repeat 1 45 chr1 2200995 2201024 (CGCATC)n Simple_repeat 1 31 chr1 2202763 2202807 (CGCTG)n Simple_repeat 1 47 chr1 2203610 2203661 (CTGCGC)n Simple_repeat 1 54 chr1 2210670 2210702 (GAATAA)n Simple_repeat 1 35 chr1 2216916 2216941 (T)n Simple_repeat 1 26 chr1 2222053 2222086 (GCCGCA)n Simple_repeat 1 37 chr1 2222228 2222276 (AGCCGC)n Simple_repeat 1 49 chr1 2223009 2223055 (TTTGAC)n Simple_repeat 1 47 chr1 2223489 2223542 GA-rich Low_complexity 1 54 chr1 2223562 2223653 (TGGATATT)n Simple_repeat 1 104 chr1 2225898 2225950 GA-rich Low_complexity 1 54 chr1 2227291 2227313 (A)n Simple_repeat 1 23 chr1 2230984 2231011 GA-rich Low_complexity 1 28 chr1 2231256 2231305 (TA)n Simple_repeat 1 50 chr1 2231998 2232039 (CAG)n Simple_repeat 1 43 chr1 2232733 2232828 (CAG)n Simple_repeat 1 96 chr1 2233532 2233574 (T)n Simple_repeat 1 43 chr1 2234120 2234168 (TAT)n Simple_repeat 1 49 chr1 2237051 2237075 (TA)n Simple_repeat 1 25 chr1 2243985 2244049 (GGTTTT)n Simple_repeat 1 65 chr1 2247928 2247992 (TATATCATGG)n Simple_repeat 1 65 chr1 2248005 2248043 (AATCCAAT)n Simple_repeat 1 44 chr1 2248637 2248732 GA-rich Low_complexity 1 96 chr1 2250247 2250286 GA-rich Low_complexity 1 40 chr1 2251091 2251183 (GAAGAT)n Simple_repeat 1 96 chr1 2257489 2257528 A-rich Low_complexity 1 40 chr1 2261840 2261887 (CATAA)n Simple_repeat 1 50 chr1 2262755 2262782 (TACA)n Simple_repeat 1 29 chr1 2263237 2263288 (TC)n Simple_repeat 1 54 chr1 2264050 2264081 (CATCCT)n Simple_repeat 1 32 chr1 2265237 2265331 (ATGTGA)n Simple_repeat 1 96 chr1 2265286 2265327 A-rich Low_complexity 1 42 chr1 2265671 2265722 (GAT)n Simple_repeat 1 53 chr1 2268535 2268582 A-rich Low_complexity 1 48 chr1 2275670 2275697 (T)n Simple_repeat 1 28 chr1 2277256 2277307 (A)n Simple_repeat 1 52 chr1 2277370 2277459 (ATTT)n Simple_repeat 1 95 chr1 2277371 2277398 (T)n Simple_repeat 1 28 chr1 2279505 2279544 (CGGCAA)n Simple_repeat 1 40 chr1 2281968 2282042 (ATC)n Simple_repeat 1 76 chr1 2286897 2286927 (TATTT)n Simple_repeat 1 31 chr1 2287834 2287859 (GCT)n Simple_repeat 1 26 chr1 2292048 2292104 (AAC)n Simple_repeat 1 58 chr1 2295333 2295439 A-rich Low_complexity 1 110 chr1 2296613 2296658 (AATA)n Simple_repeat 1 46 chr1 2297392 2297435 (ATACCTA)n Simple_repeat 1 48 chr1 2302241 2302272 (TCTTTT)n Simple_repeat 1 32 chr1 2302630 2302672 (TTTATT)n Simple_repeat 1 45 chr1 2303900 2303928 (CAT)n Simple_repeat 1 29 chr1 2308612 2308640 (TCA)n Simple_repeat 1 29 chr1 2308726 2308772 (TTTCTC)n Simple_repeat 1 50 chr1 2311100 2311122 (A)n Simple_repeat 1 23 chr1 2314413 2314444 (AACA)n Simple_repeat 1 32 chr1 2316212 2316245 (TATT)n Simple_repeat 1 34 chr1 2317166 2317239 L3 LINE/CR1 -294 3805 chr1 2320169 2320211 (TAT)n Simple_repeat 1 43 chr1 2320323 2320344 (AT)n Simple_repeat 1 22 chr1 2325020 2325052 (CCTTTC)n Simple_repeat 1 33 chr1 2325525 2325585 (TTC)n Simple_repeat 1 62 chr1 2327253 2327275 (A)n Simple_repeat 1 23 chr1 2327579 2327610 A-rich Low_complexity 1 32 chr1 2330796 2330834 (TGACGA)n Simple_repeat 1 39 chr1 2331198 2331220 (TCA)n Simple_repeat 1 23 chr1 2331429 2331490 A-rich Low_complexity 1 62 chr1 2335575 2335592 (T)n Simple_repeat 1 18 chr1 2338782 2338806 (TTTG)n Simple_repeat 1 25 chr1 2344732 2344774 A-rich Low_complexity 1 41 chr1 2346682 2346726 (TT)n Simple_repeat 1 45 chr1 2351827 2351858 A-rich Low_complexity 1 33 chr1 2352588 2352618 (ATGTAT)n Simple_repeat 1 31 chr1 2352713 2352764 A-rich Low_complexity 1 50 chr1 2355464 2355497 A-rich Low_complexity 1 35 chr1 2358847 2358863 (AT)n Simple_repeat 1 17 chr1 2369563 2369599 (TCCACT)n Simple_repeat 1 37 chr1 2373402 2373432 (A)n Simple_repeat 1 31 chr1 2378034 2378117 (TTTCAT)n Simple_repeat 1 88 chr1 2378821 2378855 (TTTA)n Simple_repeat 1 35 chr1 2385025 2385067 (A)n Simple_repeat 1 43 chr1 2387442 2387471 (TGA)n Simple_repeat 1 30 chr1 2388018 2388051 (ATC)n Simple_repeat 1 34 chr1 2411428 2411466 (A)n Simple_repeat 1 39 chr1 2412097 2412139 (TTGCT)n Simple_repeat 1 44 chr1 2414170 2414191 (C)n Simple_repeat 1 22 chr1 2415078 2415108 (ACCTCT)n Simple_repeat 1 31 chr1 2415551 2415603 A-rich Low_complexity 1 54 chr1 2416973 2417032 tRNA-Cys-TGY tRNA 5 64 chr1 2425043 2425091 (AT)n Simple_repeat 1 50 chr1 2429133 2429173 (AAGATG)n Simple_repeat 1 41 chr1 2429342 2429358 (T)n Simple_repeat 1 17 chr1 2429660 2429690 (AT)n Simple_repeat 1 31 chr1 2430598 2430678 (TTC)n Simple_repeat 1 82 chr1 2433248 2433289 A-rich Low_complexity 1 42 chr1 2443818 2443884 (TATTTT)n Simple_repeat 1 67 chr1 2448997 2449023 (TGC)n Simple_repeat 1 27 chr1 2452299 2452327 (AT)n Simple_repeat 1 30 chr1 2454943 2454997 A-rich Low_complexity 1 55 chr1 2458758 2458790 (TTCAAC)n Simple_repeat 1 34 chr1 2459255 2459298 (TTA)n Simple_repeat 1 45 chr1 2464571 2464662 A-rich Low_complexity 1 95 chr1 2477579 2477617 (ATG)n Simple_repeat 1 39 chr1 2477650 2477690 (TTTACTC)n Simple_repeat 1 43 chr1 2478678 2478728 (CTTT)n Simple_repeat 1 54 chr1 2481961 2481984 (TA)n Simple_repeat 1 24 chr1 2482754 2482803 MamRTE1 LINE/RTE-BovB 2728 2785 chr1 2485082 2485127 A-rich Low_complexity 1 46 chr1 2486726 2486747 (A)n Simple_repeat 1 22 chr1 2497450 2497476 (CAA)n Simple_repeat 1 27 chr1 2497865 2497946 tRNA-Leu-CTY tRNA -3 82 chr1 2501415 2501496 tRNA-Leu-CTY tRNA -3 82 chr1 2510123 2510168 (ATATTT)n Simple_repeat 1 48 chr1 2513439 2513468 (AAAAG)n Simple_repeat 1 30 chr1 2514165 2514204 (TTTTTAT)n Simple_repeat 1 40 chr1 2523226 2523244 (T)n Simple_repeat 1 19 chr1 2526324 2526356 A-rich Low_complexity 1 33 chr1 2529874 2529930 (ATCTTC)n Simple_repeat 1 60 chr1 2533616 2533638 (T)n Simple_repeat 1 23 chr1 2540697 2540732 (T)n Simple_repeat 1 36 chr1 2541293 2541328 (TCAGAT)n Simple_repeat 1 36 chr1 2544656 2544703 GA-rich Low_complexity 1 48 chr1 2544822 2544926 (TCATCAACA)n Simple_repeat 1 108 chr1 2546908 2546967 (AT)n Simple_repeat 1 62 chr1 2547628 2547694 (TTTCT)n Simple_repeat 1 68 chr1 2550190 2550231 (TTTTTA)n Simple_repeat 1 42 chr1 2556897 2556931 (GAT)n Simple_repeat 1 35 chr1 2557043 2557076 GA-rich Low_complexity 1 37 chr1 2560099 2560132 (TTC)n Simple_repeat 1 35 chr1 2561896 2561930 A-rich Low_complexity 1 37 chr1 2562512 2562550 (GCACCA)n Simple_repeat 1 39 chr1 2562513 2562546 (CAC)n Simple_repeat 1 34 chr1 2564197 2564221 (A)n Simple_repeat 1 25 chr1 2564427 2564456 (ATTTT)n Simple_repeat 1 30 chr1 2564465 2564489 (TA)n Simple_repeat 1 25 chr1 2565244 2565272 (CTG)n Simple_repeat 1 29 chr1 2577729 2577793 (ATTGAA)n Simple_repeat 1 67 chr1 2582592 2582618 (T)n Simple_repeat 1 27 chr1 2587205 2587221 (A)n Simple_repeat 1 17 chr1 2591597 2591689 (AATAA)n Simple_repeat 1 97 chr1 2597167 2597203 (TTTC)n Simple_repeat 1 38 chr1 2599161 2599197 (TTG)n Simple_repeat 1 38 chr1 2602512 2602598 (TTCATCATC)n Simple_repeat 1 90 chr1 2603649 2603700 (TATTT)n Simple_repeat 1 53 chr1 2608972 2609010 A-rich Low_complexity 1 39 chr1 2609910 2609931 (AT)n Simple_repeat 1 22 chr1 2632189 2632235 A-rich Low_complexity 1 48 chr1 2632482 2632516 (ATGAGA)n Simple_repeat 1 36 chr1 2634158 2634225 tRNA-Arg-CGA tRNA 3 70 chr1 2637416 2637465 (ATA)n Simple_repeat 1 54 chr1 2644611 2644671 (AGT)n Simple_repeat 1 61 chr1 2650587 2650616 (AAACA)n Simple_repeat 1 30 chr1 2651750 2651820 GA-rich Low_complexity 1 71 chr1 2654776 2654810 (TCGTTA)n Simple_repeat 1 35 chr1 2654812 2654830 (TCA)n Simple_repeat 1 19 chr1 2659883 2659931 (TATCAT)n Simple_repeat 1 52 chr1 2660045 2660070 (TCA)n Simple_repeat 1 26 chr1 2663731 2663777 (AAC)n Simple_repeat 1 47 chr1 2664981 2665024 (CAACTTGAA)n Simple_repeat 1 44 chr1 2665779 2665878 (GAATCA)n Simple_repeat 1 100 chr1 2665908 2665976 A-rich Low_complexity 1 69 chr1 2671264 2671307 A-rich Low_complexity 1 44 chr1 2678695 2678729 A-rich Low_complexity 1 37 chr1 2681287 2681351 (TTTA)n Simple_repeat 1 65 chr1 2683177 2683218 (TCTGTCAA)n Simple_repeat 1 46 chr1 2686451 2686525 (TAT)n Simple_repeat 1 75 chr1 2687175 2687191 (T)n Simple_repeat 1 17 chr1 2687324 2687341 (T)n Simple_repeat 1 18 chr1 2687622 2687653 (T)n Simple_repeat 1 32 chr1 2688058 2688108 (TGAAGA)n Simple_repeat 1 51 chr1 2692086 2692138 GA-rich Low_complexity 1 54 chr1 2694174 2694334 (AGGATG)n Simple_repeat 1 165 chr1 2697954 2698009 A-rich Low_complexity 1 57 chr1 2701361 2701410 (TTTAC)n Simple_repeat 1 52 chr1 2702814 2702855 (GAG)n Simple_repeat 1 42 chr1 2703139 2703186 (TATCTTC)n Simple_repeat 1 49 chr1 2705305 2705328 (A)n Simple_repeat 1 24 chr1 2784197 2784214 (AT)n Simple_repeat 1 18 chr1 2799741 2799776 (TGATAC)n Simple_repeat 1 36 chr1 2800784 2800829 (AATAT)n Simple_repeat 1 48 chr1 2803416 2803469 Penelope1_Vert LINE/Penelope 379 431 chr1 2806124 2806165 (TTTCT)n Simple_repeat 1 43 chr1 2837260 2837285 (AT)n Simple_repeat 1 27 chr1 2840171 2840221 A-rich Low_complexity 1 54 chr1 2842474 2842506 (TCT)n Simple_repeat 1 33 chr1 2860299 2860341 (AAT)n Simple_repeat 1 43 chr1 2861099 2861118 (A)n Simple_repeat 1 20 chr1 2863610 2863643 A-rich Low_complexity 1 34 chr1 2868389 2868417 (TTG)n Simple_repeat 1 29 chr1 2876205 2876224 (AT)n Simple_repeat 1 20 chr1 2876466 2876496 (TAAAAA)n Simple_repeat 1 32 chr1 2876467 2876495 A-rich Low_complexity 1 29 chr1 2877180 2877202 (TGT)n Simple_repeat 1 23 chr1 2886354 2886382 (TA)n Simple_repeat 1 29 chr1 2888036 2888082 A-rich Low_complexity 1 50 chr1 2895715 2895751 A-rich Low_complexity 1 39 chr1 2897706 2897732 (AT)n Simple_repeat 1 27 chr1 2898550 2898569 (ATG)n Simple_repeat 1 20 chr1 2901303 2901333 A-rich Low_complexity 1 33 chr1 2901840 2901861 (TGA)n Simple_repeat 1 22 chr1 2903548 2903587 (ACTT)n Simple_repeat 1 40 chr1 2908359 2908394 (AT)n Simple_repeat 1 36 chr1 2912070 2912118 A-rich Low_complexity 1 50 chr1 2916306 2916345 A-rich Low_complexity 1 40 chr1 2919235 2919274 (TTGTTCT)n Simple_repeat 1 42 chr1 2925004 2925022 (T)n Simple_repeat 1 19 chr1 2930392 2930465 (TCTATT)n Simple_repeat 1 75 chr1 2932476 2932517 A-rich Low_complexity 1 42 chr1 2942596 2942685 (GCA)n Simple_repeat 1 92 chr1 2945144 2945224 (TTATTC)n Simple_repeat 1 83 chr1 2946219 2946299 (TTATTC)n Simple_repeat 1 83 chr1 2954569 2954623 (TAT)n Simple_repeat 1 55 chr1 2954570 2954615 (ATTATC)n Simple_repeat 1 46 chr1 2956659 2956682 (TA)n Simple_repeat 1 25 chr1 2967062 2967125 (TAT)n Simple_repeat 1 64 chr1 2967097 2967126 (T)n Simple_repeat 1 30 chr1 2975692 2975741 (ATAA)n Simple_repeat 1 50 chr1 2979284 2979334 (GAT)n Simple_repeat 1 53 chr1 2981898 2981937 GA-rich Low_complexity 1 41 chr1 2981939 2981966 (GAC)n Simple_repeat 1 28 chr1 2986096 2986175 Tigger19a DNA/TcMar-Tigg er (91) 232 chr1 2987826 2987875 A-rich Low_complexity 1 52 chr1 2990515 2990542 (TAAAA)n Simple_repeat 1 28 chr1 3004792 3004832 (TAATAA)n Simple_repeat 1 41 chr1 3009303 3009346 (TTTAAT)n Simple_repeat 1 45 chr1 3015804 3015841 (TCTGCT)n Simple_repeat 1 38 chr1 3018950 3018974 (TA)n Simple_repeat 1 25 chr1 3021462 3021528 tRNA-Arg-AGA tRNA 2 66 chr1 3029323 3029363 (TTTCAT)n Simple_repeat 1 42 chr1 3033511 3033582 Penelope1_Vert LINE/Penelope 916 991 chr1 3034191 3034232 (TA)n Simple_repeat 1 43 chr1 3035617 3035650 (T)n Simple_repeat 1 34 chr1 3037901 3037924 (CAG)n Simple_repeat 1 24 chr1 3044382 3044427 (ATAA)n Simple_repeat 1 46 chr1 3047187 3047214 (T)n Simple_repeat 1 28 chr1 3050004 3050038 (GATGAA)n Simple_repeat 1 38 chr1 3053546 3053568 (AAT)n Simple_repeat 1 23 chr1 3061090 3061160 (TTTTCT)n Simple_repeat 1 71 chr1 3070596 3070639 (ACAACG)n Simple_repeat 1 44 chr1 3081494 3081520 (A)n Simple_repeat 1 27 chr1 3091783 3091854 tRNA-Lys-AAG tRNA 1 72 chr1 3104124 3104150 (T)n Simple_repeat 1 27 chr1 3124883 3124937 (CTGCTA)n Simple_repeat 1 58 chr1 3133280 3133307 (TCT)n Simple_repeat 1 28 chr1 3135276 3135310 (T)n Simple_repeat 1 35 chr1 3135790 3135832 A-rich Low_complexity 1 44 chr1 3144580 3144630 (TT)n Simple_repeat 1 51 chr1 3147490 3147536 (TT)n Simple_repeat 1 47 chr1 3149784 3149814 (ATG)n Simple_repeat 1 31 chr1 3150442 3150480 (ATTTTT)n Simple_repeat 1 39 chr1 3151663 3151701 (CTT)n Simple_repeat 1 40 chr1 3156829 3156883 (TTTAT)n Simple_repeat 1 55 chr1 3157122 3157160 (TA)n Simple_repeat 1 42 chr1 3167562 3167580 (AT)n Simple_repeat 1 19 chr1 3178283 3178344 L3 LINE/CR1 -2949 1150 chr1 3182132 3182164 A-rich Low_complexity 1 33 chr1 3187342 3187365 (T)n Simple_repeat 1 24 chr1 3187440 3187486 (AATT)n Simple_repeat 1 47 chr1 3196739 3196798 (TTC)n Simple_repeat 1 60 chr1 3201199 3201255 (ATAATAACG)n Simple_repeat 1 57 chr1 3201712 3201741 (A)n Simple_repeat 1 30 chr1 3203244 3203273 (ATTTAT)n Simple_repeat 1 32 chr1 3209661 3209710 (TATA)n Simple_repeat 1 53 chr1 3213683 3213714 (ATG)n Simple_repeat 1 32 chr1 3233173 3233246 L3 LINE/CR1 -1256 2843 chr1 3236821 3236879 (CAG)n Simple_repeat 1 61 chr1 3246122 3246172 (CTG)n Simple_repeat 1 51 chr1 3258094 3258134 (AATATGT)n Simple_repeat 1 41 chr1 3259848 3259883 A-rich Low_complexity 1 36 chr1 3259921 3259954 A-rich Low_complexity 1 34 chr1 3265090 3265134 (TA)n Simple_repeat 1 45 chr1 3270634 3270671 (TTTTA)n Simple_repeat 1 38 chr1 3276205 3276246 (T)n Simple_repeat 1 42 chr1 3276951 3276990 GA-rich Low_complexity 1 40 chr1 3283616 3283642 (AAT)n Simple_repeat 1 27 chr1 3289434 3289518 L3 LINE/CR1 254 335 chr1 3291288 3291313 (AT)n Simple_repeat 1 26 chr1 3292655 3292695 (CTT)n Simple_repeat 1 42 chr1 3304483 3304518 (T)n Simple_repeat 1 36 chr1 3316588 3316605 (TA)n Simple_repeat 1 18 chr1 3323273 3323294 (T)n Simple_repeat 1 22 chr1 3327488 3327520 (TTA)n Simple_repeat 1 35 chr1 3330254 3330310 (CTG)n Simple_repeat 1 57 chr1 3330310 3330359 GA-rich Low_complexity 1 54 chr1 3333436 3333454 (A)n Simple_repeat 1 19 chr1 3340882 3340904 (TTTA)n Simple_repeat 1 23 chr1 3357627 3357673 GA-rich Low_complexity 1 48 chr1 3361044 3361140 (AT)n Simple_repeat 1 102 chr1 3363231 3363255 (AAGGTA)n Simple_repeat 1 25 chr1 3365074 3365150 A-rich Low_complexity 1 78 chr1 3380512 3380547 A-rich Low_complexity 1 36 chr1 3392436 3392464 (TACA)n Simple_repeat 1 29 chr1 3394850 3394885 A-rich Low_complexity 1 36 chr1 3404559 3404776 (GAT)n Simple_repeat 1 222 chr1 3410071 3410115 (TGT)n Simple_repeat 1 45 chr1 3410217 3410261 (CTGTTG)n Simple_repeat 1 45 chr1 3410218 3410241 (TGT)n Simple_repeat 1 24 chr1 3411398 3411433 GA-rich Low_complexity 1 37 chr1 3413827 3413850 (AT)n Simple_repeat 1 26 chr1 3420619 3420665 A-rich Low_complexity 1 47 chr1 3422255 3422292 (T)n Simple_repeat 1 38 chr1 3426410 3426439 (T)n Simple_repeat 1 30 chr1 3432379 3432430 (TTTTTA)n Simple_repeat 1 53 chr1 3443364 3443405 (TTT)n Simple_repeat 1 42 chr1 3446037 3446080 (CTTT)n Simple_repeat 1 45 chr1 3448879 3448922 A-rich Low_complexity 1 44 chr1 3449522 3449539 (T)n Simple_repeat 1 18 chr1 3455763 3455789 (AATCA)n Simple_repeat 1 27 chr1 3460971 3461002 (T)n Simple_repeat 1 32 chr1 3463361 3463406 (ATTT)n Simple_repeat 1 46 chr1 3463913 3463955 (TTCT)n Simple_repeat 1 44 chr1 3475885 3475912 (T)n Simple_repeat 1 28 chr1 3481694 3481730 (A)n Simple_repeat 1 37 chr1 3487369 3487390 (TCA)n Simple_repeat 1 22 chr1 3487408 3487451 (TGATGA)n Simple_repeat 1 44 chr1 3490400 3490426 (TTTTC)n Simple_repeat 1 27 chr1 3494414 3494450 (CAT)n Simple_repeat 1 37 chr1 3502362 3502379 (A)n Simple_repeat 1 18 chr1 3507489 3507505 (T)n Simple_repeat 1 17 chr1 3509532 3509570 (TTTATG)n Simple_repeat 1 40 chr1 3514307 3514325 (T)n Simple_repeat 1 19 chr1 3516565 3516589 (GGAA)n Simple_repeat 1 26 chr1 3518337 3518384 (TTTTTCA)n Simple_repeat 1 49 chr1 3529655 3529699 A-rich Low_complexity 1 46 chr1 3536839 3536888 A-rich Low_complexity 1 50 chr1 3552510 3552544 (TCA)n Simple_repeat 1 36 chr1 3566040 3566059 (CA)n Simple_repeat 1 20 chr1 3569548 3569576 (TATT)n Simple_repeat 1 29 chr1 3578406 3578440 (TATTT)n Simple_repeat 1 35 chr1 3582526 3582554 A-rich Low_complexity 1 29 chr1 3594827 3594861 (ATACACA)n Simple_repeat 1 38 chr1 3599862 3599890 (A)n Simple_repeat 1 29 chr1 3599932 3599961 (A)n Simple_repeat 1 30 chr1 3600375 3600406 A-rich Low_complexity 1 33 chr1 3604530 3604569 A-rich Low_complexity 1 40 chr1 3605355 3605389 GA-rich Low_complexity 1 36 chr1 3608066 3608105 (T)n Simple_repeat 1 40 chr1 3610831 3610870 (TTTTGAT)n Simple_repeat 1 40 chr1 3615029 3615085 (AACAGC)n Simple_repeat 1 58 chr1 3777729 3777759 A-rich Low_complexity 1 31 chr1 3779660 3779686 A-rich Low_complexity 1 27 chr1 3780921 3780960 (GAGAACT)n Simple_repeat 1 40 chr1 3781276 3781336 (ACAACA)n Simple_repeat 1 61 chr1 3782521 3782554 (CAG)n Simple_repeat 1 34 chr1 3787370 3787396 (GAT)n Simple_repeat 1 27 chr1 3790960 3791030 (GGTTCCAGC)n Simple_repeat 1 71 chr1 3792148 3792236 (CCGACG)n Simple_repeat 1 93 chr1 3792333 3792377 (TTGCAT)n Simple_repeat 1 51 chr1 3792378 3792423 (CTGCAT)n Simple_repeat 1 46 chr1 3793202 3793376 (CTTCCT)n Simple_repeat 1 182 chr1 3793803 3793835 (TTTCTC)n Simple_repeat 1 34 chr1 3794010 3794039 (AATA)n Simple_repeat 1 31 chr1 3794773 3794821 (T)n Simple_repeat 1 49 chr1 3801976 3802017 (TTCTTA)n Simple_repeat 1 43 chr1 3802019 3802056 (TTTTTTTAT)n Simple_repeat 1 38 chr1 3803923 3803973 (AAAGTAA)n Simple_repeat 1 51 chr1 3807541 3807594 (TTAGT)n Simple_repeat 1 55 chr1 3816605 3816638 (TTCAATC)n Simple_repeat 1 36 chr1 3820542 3820560 (A)n Simple_repeat 1 19 chr1 3821376 3821422 OldhAT1 DNA/hAT-Ac 895 944 chr1 3824099 3824132 (T)n Simple_repeat 1 34 chr1 3827919 3827960 (T)n Simple_repeat 1 42 chr1 3833319 3833335 (T)n Simple_repeat 1 17 chr1 3837685 3837732 (TTTGTCT)n Simple_repeat 1 49 chr1 3847982 3847999 (A)n Simple_repeat 1 18 chr1 3861407 3861428 (TTAA)n Simple_repeat 1 23 chr1 3870061 3870096 (T)n Simple_repeat 1 36 chr2 36504 36540 (AGTAA)n S imple_repeat 1 39 chr2 54392 54420 (ATTTT)n S imple_repeat 1 31 chr2 69030 69076 A-rich L ow_complexity 1 47 chr2 82839 82875 (TTATTT)n S imple_repeat 1 38 chr2 85650 85700 (TTTCTAC)n S imple_repeat 1 54 chr2 98277 98312 (TTATT)n S imple_repeat 1 36 chr2 106732 106752 (AT)n S imple_repeat 1 21 chr2 109122 109157 (TATTG)n S imple_repeat 1 37 chr2 113659 113676 (ATTTTTT)n S imple_repeat 1 17 chr2 113677 113748 tRNA-Lys-AAG t RNA 1 72 chr2 113749 113795 (ATTTTTT)n S imple_repeat 4 51 chr2 130241 130270 (AAG)n S imple_repeat 1 31 chr2 131845 131866 (TTCT)n S imple_repeat 1 22 chr2 136940 136971 (TCTTT)n S imple_repeat 1 32 chr2 141084 141113 (ATC)n S imple_repeat 1 30 chr2 146356 146442 GA-rich L ow_complexity 1 88 chr2 146549 146588 GA-rich L ow_complexity 1 42 chr2 149020 149060 A-rich L ow_complexity 1 43 chr2 149021 149044 (A)n S imple_repeat 1 24 chr2 149235 149270 (T)n S imple_repeat 1 36 chr2 151883 151940 (TTTTTTA)n S imple_repeat 1 58 chr2 162676 162715 (AGC)n S imple_repeat 1 41 chr2 163003 163045 (CGGTACG)n S imple_repeat 1 46 chr2 165463 165619 (ATGA)n S imple_repeat 1 163 chr2 174758 174777 (A)n S imple_repeat 1 20 chr2 176003 176237 (AGT)n S imple_repeat 1 243 chr2 180647 180690 (TTAT)n S imple_repeat 1 42 chr2 180802 180841 (TATT)n S imple_repeat 1 40 chr2 181167 181248 (AAGCCAAT)n S imple_repeat 1 82 chr2 181331 181471 (GCAGCA)n S imple_repeat 1 143 chr2 182576 182608 (CAG)n S imple_repeat 1 33 chr2 182749 182794 (GCAGCC)n S imple_repeat 1 46 chr2 185306 185356 (TTTTTA)n S imple_repeat 1 53 chr2 190262 190301 (TTACT)n S imple_repeat 1 44 chr2 192029 192056 (ATC)n S imple_repeat 1 28 chr2 197034 197073 (T)n S imple_repeat 1 40 chr2 198295 198328 (AAGAGC)n S imple_repeat 1 35 chr2 200044 200084 (T)n S imple_repeat 1 41 chr2 201357 201388 (TATTTT)n S imple_repeat 1 33 chr2 203906 203927 (AATA)n S imple_repeat 1 22 chr2 205693 205819 L3 L INE/CR1 3196 3 325 chr2 208135 208171 (T)n S imple_repeat 1 37 chr2 210766 210830 (AAATGGAGT)n S imple_repeat 1 68 chr2 211332 211359 A-rich L ow_complexity 1 28 chr2 218354 218374 (T)n S imple_repeat 1 21 chr2 219531 219553 (TA)n S imple_repeat 1 23 chr2 219699 219758 (TTTCTGT)n S imple_repeat 1 64 chr2 223930 223949 (A)n S imple_repeat 1 20 chr2 224245 224273 (GTT)n S imple_repeat 1 29 chr2 233321 233339 (AT)n S imple_repeat 1 19 chr2 235224 235265 (TCTGAT)n S imple_repeat 1 42 chr2 235274 235320 (CTC)n S imple_repeat 1 47 chr2 238913 238957 (TTCTTA)n S imple_repeat 1 49 chr2 239332 239350 (T)n S imple_repeat 1 19 chr2 242380 242425 A-rich L ow_complexity 1 47 chr2 246520 246548 (T)n S imple_repeat 1 29 chr2 252372 252441 (TTTTA)n S imple_repeat 1 71 chr2 265917 265956 (A)n S imple_repeat 1 40 chr2 269636 269664 A-rich L ow_complexity 1 29 chr2 270543 270578 (T)n S imple_repeat 1 36 chr2 273468 273494 (TATTT)n S imple_repeat 1 27 chr2 286419 286510 GA-rich L ow_complexity 1 95 chr2 299391 299430 (AT)n S imple_repeat 1 41 chr2 301256 301291 A-rich L ow_complexity 1 36 chr2 301433 301479 A-rich L ow_complexity 1 47 chr2 307888 307909 (T)n S imple_repeat 1 22 chr2 317828 317848 (A)n S imple_repeat 1 21 chr2 317983 318027 (TT)n S imple_repeat 1 45 chr2 320120 320171 GA-rich L ow_complexity 1 52 chr2 325055 325079 (CTT)n S imple_repeat 1 25 chr2 328083 328169 (ATTTTA)n S imple_repeat 1 89 chr2 331527 331544 (T)n S imple_repeat 1 18 chr2 336260 336291 A-rich L ow_complexity 1 32 chr2 338824 338857 (T)n S imple_repeat 1 34 chr2 339333 339381 (TGA)n S imple_repeat 1 49 chr2 342883 342917 A-rich L ow_complexity 1 35 chr2 345948 345989 (TTTG)n S imple_repeat 1 43 chr2 351246 351266 (T)n S imple_repeat 1 21 chr2 357343 357375 (ATG)n S imple_repeat 1 34 chr2 357958 357982 (T)n S imple_repeat 1 25 chr2 361300 361339 (TTAT)n S imple_repeat 1 40 chr2 366367 366383 (T)n S imple_repeat 1 17 chr2 370874 370938 (TTTCT)n S imple_repeat 1 67 chr2 371070 371105 (TTTTC)n S imple_repeat 1 37 chr2 372099 372130 (T)n S imple_repeat 1 32 chr2 374699 374754 (TTCGT)n S imple_repeat 1 58 chr2 375414 375433 (GAT)n S imple_repeat 1 20 chr2 380399 380440 GA-rich L ow_complexity 1 42 chr2 390304 390337 A-rich L ow_complexity 1 34 chr2 390826 390887 (CACCTG)n S imple_repeat 1 62 chr2 394861 394895 A-rich L ow_complexity 1 35 chr2 396371 396398 (GTT)n S imple_repeat 1 28 chr2 416445 416502 (TTATT)n S imple_repeat 1 59 chr2 419480 419513 (AAGTTC)n S imple_repeat 1 34 chr2 419874 419890 (A)n S imple_repeat 1 17 chr2 421939 421988 (TGA)n S imple_repeat 1 50 chr2 426629 426661 (CTT)n S imple_repeat 1 33 chr2 430300 430351 A-rich L ow_complexity 1 53 chr2 432094 432130 (TTTT)n S imple_repeat 1 37 chr2 435878 435894 (C)n S imple_repeat 1 17 chr2 437072 437100 (GTTTT)n S imple_repeat 1 29 chr2 447160 447180 (A)n S imple_repeat 1 21 chr2 448181 448226 GA-rich L ow_complexity 1 46 chr2 451786 451827 A-rich L ow_complexity 1 44 chr2 455469 455487 (TA)n S imple_repeat 1 19 chr2 470035 470068 (ATG)n S imple_repeat 1 34 chr2 470619 470636 (T)n S imple_repeat 1 18 chr2 474856 474883 A-rich L ow_complexity 1 28 chr2 476559 476590 (CAG)n S imple_repeat 1 32 chr2 476591 476626 (ACAGCA)n S imple_repeat 6 41 chr2 477848 477873 (T)n S imple_repeat 1 26 chr2 481852 481869 (A)n S imple_repeat 1 18 chr2 483303 483319 (T)n S imple_repeat 1 17 chr2 486084 486113 (T)n S imple_repeat 1 30 chr2 487855 487935 (TTTTAT)n S imple_repeat 1 82 chr2 488469 488502 (TTTTA)n S imple_repeat 1 34 chr2 488539 488609 A-rich L ow_complexity 1 69 chr2 488756 488818 (CTTTT)n S imple_repeat 1 64 chr2 488757 488794 (T)n S imple_repeat 1 38 chr2 492158 492212 A-rich L ow_complexity 1 58 chr2 493999 494021 (A)n S imple_repeat 1 23 chr2 497033 497052 (A)n S imple_repeat 1 20 chr2 497438 497521 (GATGAG)n S imple_repeat 1 85 chr2 506141 506165 (T)n S imple_repeat 1 25 chr2 508154 508175 (T)n S imple_repeat 1 22 chr2 510390 510412 (A)n S imple_repeat 1 23 chr2 511434 511462 (AGG)n S imple_repeat 1 30 chr2 511925 511983 (CAA)n S imple_repeat 1 59 chr2 513478 513528 (TTTAT)n S imple_repeat 1 52 chr2 516360 516420 (TTCTCCTTC)n S imple_repeat 1 62 chr2 518321 518354 A-rich L ow_complexity 1 34 chr2 525365 525383 (A)n S imple_repeat 1 19 chr2 530284 530316 (TATTTTTT)n S imple_repeat 1 33 chr2 533588 533617 (A)n S imple_repeat 1 30 chr2 534905 534932 (ACATA)n S imple_repeat 1 28 chr2 538966 538989 (T)n S imple_repeat 1 24 chr2 544480 544531 (CAATGCC)n S imple_repeat 1 53 chr2 547717 547766 A-rich L ow_complexity 1 48 chr2 555045 555102 GA-rich L ow_complexity 1 58 chr2 560410 560431 (A)n S imple_repeat 1 22 chr2 560562 560593 GA-rich L ow_complexity 1 34 chr2 565006 565049 (T)n S imple_repeat 1 44 chr2 566588 566610 (T)n S imple_repeat 1 23 chr2 567847 567877 (T)n S imple_repeat 1 31 chr2 570146 570183 (T)n S imple_repeat 1 38 chr2 573370 573404 (TTTTTA)n S imple_repeat 1 35 chr2 576473 576496 (T)n S imple_repeat 1 24 chr2 580422 580452 (T)n S imple_repeat 1 31 chr2 585330 585387 A-rich L ow_complexity 1 58 chr2 587302 587391 A-rich L ow_complexity 1 93 chr2 593132 593163 (TTTTC)n S imple_repeat 1 34 chr2 595499 595526 (GAT)n S imple_repeat 1 28 chr2 596164 596191 (AATG)n S imple_repeat 1 28 chr2 598024 598052 (ATTTT)n S imple_repeat 1 30 chr2 599837 599885 (TAAT)n S imple_repeat 1 50 chr2 600788 600822 (AT)n S imple_repeat 1 35 chr2 604338 604354 (A)n S imple_repeat 1 17 chr2 605721 605739 (A)n S imple_repeat 1 19 chr2 609577 609597 (A)n S imple_repeat 1 21 chr2 614572 614592 (A)n S imple_repeat 1 21 chr2 626315 626331 (T)n S imple_repeat 1 17 chr2 631835 631881 (ATG)n S imple_repeat 1 48 chr2 634290 634323 (TGT)n S imple_repeat 1 34 chr2 634811 634840 (AATAA)n S imple_repeat 1 31 chr2 641815 641838 (T)n S imple_repeat 1 24 chr2 645304 645359 A-rich L ow_complexity 1 56 chr2 645622 645657 (CAGGCA)n S imple_repeat 1 39 chr2 646028 646107 (ACAGCA)n S imple_repeat 1 84 chr2 646699 646776 GA-rich L ow_complexity 1 78 chr2 646794 646821 (AGC)n S imple_repeat 1 28 chr2 646832 646862 (CTGCAA)n S imple_repeat 1 31 chr2 647644 647681 (TTTTTCA)n S imple_repeat 1 39 chr2 652381 652405 (A)n S imple_repeat 1 25 chr2 653560 653581 (T)n S imple_repeat 1 22 chr2 660156 660226 (ATG)n S imple_repeat 1 71 chr2 663618 663669 (CAT)n S imple_repeat 1 54 chr2 663771 663815 (ATC)n S imple_repeat 1 45 chr2 663839 663869 (CAT)n S imple_repeat 1 32 chr2 666825 666866 A-rich L ow_complexity 1 42 chr2 672130 672168 (TCATCA)n S imple_repeat 1 39 chr2 674166 674194 (CTCTT)n S imple_repeat 1 30 chr2 676987 677007 (CTC)n S imple_repeat 1 21 chr2 679228 679251 (T)n S imple_repeat 1 24 chr2 679581 679629 A-rich L ow_complexity 1 50 chr2 682545 682570 (A)n S imple_repeat 1 26 chr2 688748 688808 A-rich L ow_complexity 1 64 chr2 690871 690914 (TGATTT)n S imple_repeat 1 44 chr2 691552 691581 (T)n S imple_repeat 1 30 chr2 693300 693353 (TGCAGG)n S imple_repeat 1 57 chr2 693652 693692 (GCTTAG)n S imple_repeat 1 41 chr2 694151 694168 (T)n S imple_repeat 1 18 chr2 698345 698361 (A)n S imple_repeat 1 17 chr2 700390 700438 A-rich L ow_complexity 1 49 chr2 702883 702943 (TTATT)n S imple_repeat 1 63 chr2 703199 703251 (ACATTC)n S imple_repeat 1 54 chr2 704599 704651 (TTTC)n S imple_repeat 1 54 chr2 708458 708488 (TA)n S imple_repeat 1 31 chr2 717530 717555 (A)n S imple_repeat 1 26 chr2 718092 718113 (T)n S imple_repeat 1 22 chr2 724444 724478 (T)n S imple_repeat 1 35 chr2 729533 729571 A-rich L ow_complexity 1 39 chr2 729589 729616 (TTGTT)n S imple_repeat 1 28 chr2 731724 731768 (GTGAT)n S imple_repeat 1 49 chr2 732946 732980 (T)n S imple_repeat 1 35 chr2 733570 733594 (TATT)n S imple_repeat 1 25 chr2 734152 734183 L3 L INE/CR1 1614 1 642 ( chr2 736445 736481 (GCA)n S imple_repeat 1 38 chr2 736566 736599 (ACA)n S imple_repeat 1 34 chr2 737101 737133 (ACTTT)n S imple_repeat 1 34 chr2 739323 739368 (T)n S imple_repeat 1 46 chr2 741665 741702 (TAA)n S imple_repeat 1 39 chr2 751214 751263 (TGT)n S imple_repeat 1 50 chr2 751764 751800 GA-rich L ow_complexity 1 37 chr2 753148 753224 (TCTT)n S imple_repeat 1 78 chr2 753367 753518 (TACT)n S imple_repeat 1 164 chr2 754268 754295 (T)n S imple_repeat 1 28 chr2 771055 771112 A-rich L ow_complexity 1 58 chr2 779703 779740 (TCTCCT)n S imple_repeat 1 40 chr2 780568 780641 (CCA)n S imple_repeat 1 74 chr2 780764 780787 (TTC)n S imple_repeat 1 24 chr2 780875 780921 (CGCCAC)n S imple_repeat 1 48 chr2 781423 781489 (TACCTAA)n S imple_repeat 1 68 chr2 783150 783186 (A)n S imple_repeat 1 37 chr2 785722 785753 (A)n S imple_repeat 1 32 chr2 787714 787812 (GATGAA)n S imple_repeat 1 102 chr2 789435 789508 (CTCTC)n S imple_repeat 1 76 chr2 789509 789546 (TCTTTCTAT)n S imple_repeat 1 38 chr2 789547 789592 (CTCTC)n S imple_repeat 2 46 chr2 789745 789785 A-rich L ow_complexity 1 41 chr2 799543 799561 (T)n S imple_repeat 1 19 chr2 801219 801242 (T)n S imple_repeat 1 24 chr2 805126 805209 A-rich L ow_complexity 1 84 chr2 815576 815626 (AAC)n S imple_repeat 1 51 chr2 817865 817900 (T)n S imple_repeat 1 36 chr2 818602 818651 (ACTCTT)n S imple_repeat 1 52 chr2 819180 819278 (ATTTT)n S imple_repeat 1 101 chr2 822814 822887 (CCTTCT)n S imple_repeat 1 75 chr2 824721 824754 (CATCTT)n S imple_repeat 1 34 chr2 835115 835196 GA-rich L ow_complexity 1 87 chr2 835306 835357 (ATAA)n S imple_repeat 1 54 chr2 835908 835954 A-rich L ow_complexity 1 50 chr2 835913 835936 (A)n S imple_repeat 1 24 chr2 838013 838046 (GTAA)n S imple_repeat 1 36 chr2 841717 841772 (CAGCGG)n S imple_repeat 1 57 chr2 845996 846019 (T)n S imple_repeat 1 24 chr2 854635 854732 (CATCTT)n S imple_repeat 1 107 chr2 854712 854735 (TCA)n S imple_repeat 1 24 chr2 856228 856256 (ACAT)n S imple_repeat 1 29 chr2 857469 857490 (T)n S imple_repeat 1 22 chr2 859903 859941 (AAGATGC)n S imple_repeat 1 40 chr2 863386 863440 (T)n S imple_repeat 1 55 chr2 868391 868446 (TTCCTA)n S imple_repeat 1 61 chr2 873780 873819 (AAGTTGAGG)n S imple_repeat 1 40 chr2 878662 878694 (TTG)n S imple_repeat 1 33 chr2 884526 884570 A-rich L ow_complexity 1 46 chr2 890737 890753 (A)n S imple_repeat 1 17 chr2 895763 895807 (T)n S imple_repeat 1 45 chr2 902960 902983 (A)n S imple_repeat 1 24 chr2 905702 905741 A-rich L ow_complexity 1 40 chr2 908394 908526 (GAGGAT)n S imple_repeat 1 135 chr2 909603 909666 A-rich L ow_complexity 1 66 chr2 914216 914263 (T)n S imple_repeat 1 48 chr2 916553 916581 A-rich L ow_complexity 1 29 chr2 917114 917158 (TTTTTA)n S imple_repeat 1 47 chr2 921042 921087 (ATTTT)n S imple_repeat 1 47 chr2 922719 922764 (GAAAAGACT)n S imple_repeat 1 46 chr2 929453 929479 A-rich L ow_complexity 1 27 chr2 929588 929669 A-rich L ow_complexity 1 84 chr2 931821 931859 (T)n S imple_repeat 1 39 chr2 934013 934066 (TATTTCC)n S imple_repeat 1 58 chr2 936241 936281 (T)n S imple_repeat 1 41 chr2 940530 940555 (A)n S imple_repeat 1 26 chr2 940769 940815 A-rich L ow_complexity 1 49 chr2 945818 945975 (GATGAA)n S imple_repeat 1 162 chr2 948823 948851 (T)n S imple_repeat 1 29 chr2 952036 952078 (TCATCT)n S imple_repeat 1 46 chr2 952634 952666 (T)n S imple_repeat 1 33 chr2 954677 954702 (A)n S imple_repeat 1 26 chr2 958254 958308 (TTTTA)n S imple_repeat 1 56 chr2 958388 958418 (AT)n S imple_repeat 1 32 chr2 963776 963813 A-rich L ow_complexity 1 40 chr2 964763 964813 (TTTTCAGAC)n S imple_repeat 1 51 chr2 965012 965040 (TCTTCA)n S imple_repeat 1 29 chr2 965679 965725 (CGATTT)n S imple_repeat 1 49 chr2 968684 968772 (ATGCAAG)n S imple_repeat 1 96 chr2 971529 971563 (TGAT)n S imple_repeat 1 36 chr2 971743 971789 (ATTTTTGGCG)n S imple_repeat 1 47 chr2 973043 973119 (TCC)n S imple_repeat 1 79 chr2 973157 973185 (TCT)n S imple_repeat 1 29 chr2 986370 986401 (A)n S imple_repeat 1 32 chr2 986431 986464 A-rich L ow_complexity 1 34 chr2 994637 994690 A-rich L ow_complexity 1 56 chr2 995040 995057 (A)n S imple_repeat 1 18 chr2 995991 996047 A-rich L ow_complexity 1 57 chr2 1002980 1003021 A-rich L ow_complexity 1 42 chr2 1004277 1004311 (CA)n S imple_repeat 1 36 chr2 1005012 1005033 (T)n S imple_repeat 1 22 chr2 1005167 1005204 (TA)n S imple_repeat 1 38 chr2 1006476 1006512 (TGAAGA)n S imple_repeat 1 40 chr2 1008552 1008620 (AAAAT)n S imple_repeat 1 69 chr2 1008777 1008818 A-rich L ow_complexity 1 42 chr2 1017384 1017431 (TCT)n S imple_repeat 1 49 chr2 1017804 1017822 (T)n S imple_repeat 1 19 chr2 1018193 1018252 (TGATTC)n S imple_repeat 1 60 chr2 1020793 1020814 (TTG)n S imple_repeat 1 22 chr2 1023038 1023084 A-rich L ow_complexity 1 47 chr2 1025714 1025758 A-rich L ow_complexity 1 45 chr2 1029838 1029917 (CTCTTC)n S imple_repeat 1 83 chr2 1032982 1033006 (A)n S imple_repeat 1 25 chr2 1037208 1037234 (A)n S imple_repeat 1 27 chr2 1037531 1037610 (CATATAT)n S imple_repeat 1 87 chr2 1037532 1037561 (AT)n S imple_repeat 1 30 chr2 1038709 1038738 (TTTCT)n S imple_repeat 1 30 chr2 1046455 1046542 (TTC)n S imple_repeat 1 90 chr2 1053008 1053103 GA-rich L ow_complexity 1 98 chr2 1053975 1054015 (TTTTTA)n S imple_repeat 1 41 chr2 1054845 1054976 (GAAGAT)n S imple_repeat 1 138 chr2 1058171 1058198 (A)n S imple_repeat 1 28 chr2 1061283 1061309 (T)n S imple_repeat 1 27 chr2 1063693 1063755 (GATCTG)n S imple_repeat 1 63 chr2 1071591 1071626 A-rich L ow_complexity 1 36 chr2 1073812 1073842 (TTG)n S imple_repeat 1 31 chr2 1081982 1082016 A-rich L ow_complexity 1 35 chr2 1085006 1085062 (T)n S imple_repeat 1 57 chr2 1091252 1091271 (A)n S imple_repeat 1 20 chr2 1094001 1094048 (ATC)n S imple_repeat 1 51 chr2 1102225 1102254 (CTC)n S imple_repeat 1 31 chr2 1103976 1104008 A-rich L ow_complexity 1 33 chr2 1117443 1117474 (T)n S imple_repeat 1 32 chr2 1119641 1119683 (TT)n S imple_repeat 1 43 chr2 1123560 1123584 (ATG)n S imple_repeat 1 25 chr2 1128116 1128165 (TTATTT)n S imple_repeat 1 51 chr2 1128510 1128563 AmnSINE2 S INE/tRNA-Deu 4 60 chr2 1129513 1129540 (AGC)n S imple_repeat 1 28 chr2 1129556 1129576 (CAA)n S imple_repeat 1 21 chr2 1144948 1144999 L3 L INE/CR1 (1298) 2 801 chr2 1146777 1146802 (A)n S imple_repeat 1 26 chr2 1161095 1161121 (TTCCT)n S imple_repeat 1 27 chr2 1163879 1163897 (T)n S imple_repeat 1 19 chr2 1164027 1164053 (ATTTT)n S imple_repeat 1 27 chr2 1171475 1171510 A-rich L ow_complexity 1 36 chr2 1174247 1174271 (AT)n S imple_repeat 1 25 chr2 1179927 1179958 (TCATCC)n S imple_repeat 1 32 chr2 1201850 1201891 (TTTTC)n S imple_repeat 1 43 chr2 1202517 1202586 (TTCTTCA)n S imple_repeat 1 75 chr2 1207077 1207120 (ATA)n S imple_repeat 1 45 chr2 1208753 1208809 (TAT)n S imple_repeat 1 58 chr2 1208929 1208974 (ATTTTT)n S imple_repeat 1 47 chr2 1208930 1208954 (T)n S imple_repeat 1 25 chr2 1210036 1210167 GA-rich L ow_complexity 1 141 chr2 1211662 1211688 (CAG)n S imple_repeat 1 27 chr2 1211703 1211749 (GCA)n S imple_repeat 1 47 chr2 1211779 1211992 (CAGCAA)n S imple_repeat 1 214 chr2 1212307 1212369 (TTCATT)n S imple_repeat 1 58 chr2 1214314 1214330 (A)n S imple_repeat 1 17 chr2 1215480 1215498 (A)n S imple_repeat 1 19 chr2 1222860 1222904 (TATTATTTTA)n S imple_repeat 1 45 chr2 1224126 1224180 (GAT)n S imple_repeat 1 55 chr2 1233148 1233181 (TGA)n S imple_repeat 1 34 chr2 1236090 1236111 (T)n S imple_repeat 1 22 chr2 1245042 1245100 (TTATAT)n S imple_repeat 1 62 chr2 1253244 1253263 (T)n S imple_repeat 1 20 chr2 1253404 1253438 (TTCTT)n S imple_repeat 1 35 chr2 1257494 1257593 (ATG)n S imple_repeat 1 100 chr2 1258673 1258701 (A)n S imple_repeat 1 29 chr2 1261361 1261380 (A)n S imple_repeat 1 20 chr2 1264256 1264309 OldhAT1 D NA/hAT-Ac -2270 578 chr2 1269327 1269375 A-rich L ow_complexity 1 49 chr2 1276856 1276873 (TT)n S imple_repeat 1 18 chr2 1286396 1286461 tRNA-Ser-TCY t RNA -12 73 chr2 1297652 1297699 (TTC)n S imple_repeat 1 48 chr2 1308116 1308148 (AGC)n S imple_repeat 1 33 chr2 1320858 1320899 (TTACT)n S imple_repeat 1 44 chr2 1321334 1321394 tRNA-Gly-GGG t RNA 6 65 chr2 1327422 1327445 (A)n S imple_repeat 1 24 chr2 1330335 1330368 (ATC)n S imple_repeat 1 34 chr2 1330576 1330607 (ACGTCA)n S imple_repeat 1 32 chr2 1331305 1331373 (TCA)n S imple_repeat 1 70 chr2 1332701 1332775 U2 s nRNA -106 82 chr2 1339866 1339887 (TA)n S imple_repeat 1 22 chr2 1343027 1343061 A-rich L ow_complexity 1 35 chr2 1346056 1346079 (A)n S imple_repeat 1 24 chr2 1347449 1347471 (A)n S imple_repeat 1 23 chr2 1347825 1347843 (A)n S imple_repeat 1 19 chr2 1348960 1349001 (A)n S imple_repeat 1 42 chr2 1355915 1355947 (CAT)n S imple_repeat 1 33 chr2 1356112 1356131 (GCA)n S imple_repeat 1 20 chr2 1359162 1359235 (AGATGA)n S imple_repeat 1 77 chr2 1370594 1370626 (AT)n S imple_repeat 1 33 chr2 1385657 1385687 (ATC)n S imple_repeat 1 31 chr2 1385972 1386049 (ATCTTC)n S imple_repeat 1 78 chr2 1395436 1395482 (TATTATA)n S imple_repeat 1 47 chr2 1395853 1395877 (TATTT)n S imple_repeat 1 26 chr2 1397885 1397911 (TGGA)n S imple_repeat 1 27 chr2 1400837 1400872 Tigger19a D NA/TcMar-Tigge r (68) 255 chr2 1401749 1401770 (T)n S imple_repeat 1 22 chr2 1408244 1408308 tRNA-Pro-CCA t RNA -3 72 chr2 1409133 1409172 A-rich L ow_complexity 1 40 chr2 1415695 1415711 (A)n S imple_repeat 1 17 chr2 1434763 1434801 A-rich L ow_complexity 1 41 chr2 1436562 1436612 A-rich L ow_complexity 1 53 chr2 1436563 1436586 (A)n S imple_repeat 1 24 chr2 1440370 1440387 (A)n S imple_repeat 1 18 chr2 1463170 1463196 (A)n S imple_repeat 1 27 chr2 1466711 1466746 (AAGA)n S imple_repeat 1 36 chr2 1478731 1478761 (ATTT)n S imple_repeat 1 31 chr2 1480526 1480554 (CAC)n S imple_repeat 1 29 chr2 1480703 1480741 A-rich L ow_complexity 1 42 chr2 1483568 1483613 (CAT)n S imple_repeat 1 46 chr2 1487339 1487359 (T)n S imple_repeat 1 21 chr2 1490605 1490657 A-rich L ow_complexity 1 53 chr2 1490747 1490770 (T)n S imple_repeat 1 24 chr2 1490887 1490941 (CTTT)n S imple_repeat 1 55 chr2 1494676 1494765 A-rich L ow_complexity 1 94 chr2 1495893 1495914 (T)n S imple_repeat 1 22 chr2 1508310 1508355 (TTAATC)n S imple_repeat 1 46 chr2 1511011 1511052 (TTTTA)n S imple_repeat 1 42 chr2 1512871 1512902 (CAGATG)n S imple_repeat 1 32 chr2 1519669 1519831 (AGCATTT)n S imple_repeat 1 181 chr2 1521553 1521576 (A)n S imple_repeat 1 24 chr2 1522438 1522476 (TTGTGT)n S imple_repeat 1 39 chr2 1524254 1524305 A-rich L ow_complexity 1 55 chr2 1525526 1525695 (TGCTTG)n S imple_repeat 1 172 chr2 1526293 1526325 A-rich L ow_complexity 1 33 chr2 1528392 1528416 (A)n S imple_repeat 1 25 chr2 1529120 1529175 GA-rich L ow_complexity 1 56 chr2 1531726 1531783 (ATTAAG)n S imple_repeat 1 62 chr2 1544466 1544511 (TTCAT)n S imple_repeat 1 48 chr2 1544671 1544775 A-rich L ow_complexity 1 106 chr2 1546629 1546672 (GCTGAAAAT)n S imple_repeat 1 44 chr2 1546879 1546916 (T)n S imple_repeat 1 38 chr2 1547435 1547475 GA-rich L ow_complexity 1 41 chr2 1548400 1548559 (GATGCA)n S imple_repeat 1 175 chr2 1548666 1548712 OldhAT1 D NA/hAT-Ac (1211) 1 637 chr2 1556689 1556725 (AAAAGC)n S imple_repeat 1 37 chr2 1558504 1558544 A-rich L ow_complexity 1 41 chr2 1560806 1560828 (TTTC)n S imple_repeat 1 24 chr2 1562010 1562111 L3 L INE/CR1 844 947 ( chr2 1564004 1564065 GA-rich L ow_complexity 1 62 chr2 1564399 1564423 (AATG)n S imple_repeat 1 25 chr2 1567264 1567306 (TGGCTT)n S imple_repeat 1 43 chr2 1569220 1569291 tRNA-Pro-CCA t RNA 1 72 chr2 1570125 1570147 (AT)n S imple_repeat 1 24 chr2 1572570 1572597 (ATTTT)n S imple_repeat 1 28 chr2 1578526 1578551 (TATT)n S imple_repeat 1 26 chr2 1580982 1581030 (AGAAGTA)n S imple_repeat 1 51 chr2 1581243 1581302 A-rich L ow_complexity 1 66 chr2 1582095 1582119 (T)n S imple_repeat 1 25 chr2 1582862 1582889 (T)n S imple_repeat 1 28 chr2 1586149 1586182 MamRTE1 L INE/RTE-BovB 2574 2 610 ( chr2 1587729 1587760 (AATTTG)n S imple_repeat 1 33 chr2 1592804 1592828 (T)n S imple_repeat 1 25 chr2 1595908 1595926 (A)n S imple_repeat 1 19 chr2 1596390 1596436 GA-rich L ow_complexity 1 47 chr2 1607624 1607644 (T)n S imple_repeat 1 21 chr2 1613448 1613504 A-rich L ow_complexity 1 61 chr2 1614028 1614073 (CTTTTT)n S imple_repeat 1 47 chr2 1615087 1615113 (T)n S imple_repeat 1 27 chr2 1618114 1618157 (GTGGCT)n S imple_repeat 1 45 chr2 1618777 1618816 (TTTAT)n S imple_repeat 1 42 chr2 1620725 1620806 (TATATT)n S imple_repeat 1 83 chr2 1627322 1627348 (T)n S imple_repeat 1 27 chr2 1633384 1633447 GA-rich L ow_complexity 1 65 chr2 1635558 1635574 (T)n S imple_repeat 1 17 chr2 1641042 1641088 (CCTCCA)n S imple_repeat 1 47 chr2 1642926 1643235 (ATTTA)n S imple_repeat 1 321 chr2 1643333 1643364 A-rich L ow_complexity 1 32 chr2 1643365 1643404 (GATAT)n S imple_repeat 1 42 chr2 1647779 1647816 (AGTAC)n S imple_repeat 1 40 chr2 1648531 1648555 (TGC)n S imple_repeat 1 25 chr2 1650821 1650845 (A)n S imple_repeat 1 25 chr2 1656447 1656571 (TTC)n S imple_repeat 1 131 chr2 1657105 1657122 (T)n S imple_repeat 1 18 chr2 1657475 1657524 A-rich L ow_complexity 1 51 chr2 1661672 1661747 A-rich L ow_complexity 1 78 chr2 1666780 1666826 A-rich L ow_complexity 1 48 chr2 1666786 1666816 (AT)n S imple_repeat 1 31 chr2 1668851 1668902 GA-rich L ow_complexity 1 52 chr2 1670593 1670639 A-rich L ow_complexity 1 47 chr2 1671477 1671508 A-rich L ow_complexity 1 34 chr2 1676550 1676605 (CATCAG)n S imple_repeat 1 59 chr2 1684889 1684919 (TA)n S imple_repeat 1 31 chr2 1687370 1687414 (AAATA)n S imple_repeat 1 45 chr2 1689839 1689858 (T)n S imple_repeat 1 20 chr2 1693043 1693079 (GACGAG)n S imple_repeat 1 37 chr2 1694181 1694254 (TTTAGTA)n S imple_repeat 1 79 chr2 1694474 1694509 (CTATTCT)n S imple_repeat 1 36 chr2 1700355 1700408 (ACA)n S imple_repeat 1 54 chr2 1700885 1701069 (TCATCT)n S imple_repeat 1 197 chr2 1703287 1703481 (CTAATCT)n S imple_repeat 1 195 chr2 1706834 1706884 A-rich L ow_complexity 1 52 chr2 1709249 1709265 (A)n S imple_repeat 1 17 chr2 1709475 1709550 (CTTTTTT)n S imple_repeat 1 77 chr2 1709882 1709920 (AAT)n S imple_repeat 1 39 chr2 1711836 1711859 (T)n S imple_repeat 1 24 chr2 1718262 1718289 (T)n S imple_repeat 1 28 chr2 1721935 1721988 (AACTGTG)n S imple_repeat 1 57 chr2 1730718 1730757 (ATCTTCC)n S imple_repeat 1 44 chr2 1734737 1734759 (A)n S imple_repeat 1 23 chr2 1740142 1740179 (CCTCTT)n S imple_repeat 1 38 chr2 1741460 1741514 (AACA)n S imple_repeat 1 56 chr2 1744406 1744499 A-rich L ow_complexity 1 98 chr2 1749139 1749177 (TTATTT)n S imple_repeat 1 39 chr2 1752904 1752967 tRNA-Phe-TTY t RNA 1 65 chr2 1756847 1756876 (TTATTG)n S imple_repeat 1 31 chr2 1757099 1757140 (ATAGAGG)n S imple_repeat 1 44 chr2 1759166 1759204 (TTGTTA)n S imple_repeat 1 39 chr2 1759775 1759811 (GAATCA)n S imple_repeat 1 38 chr2 1760509 1760554 (TTTTC)n S imple_repeat 1 48 chr2 1760729 1760752 (A)n S imple_repeat 1 24 chr2 1760832 1760862 A-rich L ow_complexity 1 31 chr2 1767328 1767344 (T)n S imple_repeat 1 17 chr2 1770292 1770323 (GTTCTT)n S imple_repeat 1 32 chr2 1770914 1770972 (ATT)n S imple_repeat 1 61 chr2 1774081 1774137 GA-rich L ow_complexity 1 62 chr2 1774640 1774727 (TTCTTC)n S imple_repeat 1 91 chr2 1775984 1776025 (CAAACAGCA)n S imple_repeat 1 42 chr2 1776234 1776310 A-rich L ow_complexity 1 78 chr2 1777325 1777360 (TGGAGTG)n S imple_repeat 1 38 chr2 1779738 1779803 (TAACTGA)n S imple_repeat 1 66 chr2 1788003 1788021 (T)n S imple_repeat 1 19 chr2 1795781 1795814 (CTTT)n S imple_repeat 1 35 chr2 1796236 1796277 (TGTCCAT)n S imple_repeat 1 43 chr2 1796281 1796304 (CTT)n S imple_repeat 1 25 chr2 1798165 1798199 (CCTGAT)n S imple_repeat 1 35 chr2 1804630 1804667 (TGAATT)n S imple_repeat 1 39 chr2 1821946 1821996 (TTCA)n S imple_repeat 1 57 chr2 1823255 1823296 (CATCTT)n S imple_repeat 1 44 chr2 1828019 1828054 (ATA)n S imple_repeat 1 36 chr2 1834080 1834114 (GCTATT)n S imple_repeat 1 36 chr2 1835957 1835973 (A)n S imple_repeat 1 17 chr2 1843036 1843076 A-rich L ow_complexity 1 41 chr2 1854574 1854631 tRNA-Phe-TTY t RNA 8 65 chr2 1854642 1854692 (TTCTTT)n S imple_repeat 1 51 chr2 1855117 1855157 GA-rich L ow_complexity 1 43 chr2 1867265 1867285 (TATT)n S imple_repeat 1 21 chr2 1873898 1873928 (T)n S imple_repeat 1 31 chr2 1874632 1874671 (CTG)n S imple_repeat 1 40 chr2 1876382 1876410 (TTTG)n S imple_repeat 1 30 chr2 1878054 1878087 (TATTCA)n S imple_repeat 1 35 chr2 1878160 1878201 (TA)n S imple_repeat 1 43 chr2 1880440 1880471 (CTTCTT)n S imple_repeat 1 32 chr2 1882003 1882060 (TTTTC)n S imple_repeat 1 60 chr2 1882334 1882429 (CTTCTT)n S imple_repeat 1 97 chr2 1884180 1884233 (TTT)n S imple_repeat 1 54 chr2 1886448 1886496 GA-rich L ow_complexity 1 50 chr2 1889933 1889951 (T)n S imple_repeat 1 19 chr2 1890613 1890660 A-rich L ow_complexity 1 50 chr2 1891861 1891884 (AAG)n S imple_repeat 1 26 chr2 1892188 1892209 (CTTT)n S imple_repeat 1 22 chr2 1897427 1897465 (TTTC)n S imple_repeat 1 40 chr2 1904743 1904775 (GAGGAT)n S imple_repeat 1 33 chr2 1905176 1905210 (TATAGA)n S imple_repeat 1 35 chr2 1907966 1907997 A-rich L ow_complexity 1 33 chr2 1908182 1908207 (TGAAT)n S imple_repeat 1 26 chr2 1910263 1910318 (TGA)n S imple_repeat 1 58 chr2 1914328 1914393 (TGC)n S imple_repeat 1 64 chr2 1914394 1914461 (TGCTGT)n S imple_repeat 1 68 chr2 1914462 1914506 (TGC)n S imple_repeat 2 46 chr2 1914918 1914953 (CTG)n S imple_repeat 1 37 chr2 1915386 1915409 (A)n S imple_repeat 1 24 chr2 1917038 1917091 A-rich L ow_complexity 1 54 chr2 2036467 2036519 (CTC)n S imple_repeat 1 53 chr2 2036503 2036562 (CTTCT)n S imple_repeat 1 62 chr2 2037267 2037300 (T)n S imple_repeat 1 34 chr2 2038827 2038843 (A)n S imple_repeat 1 17 chr2 2040387 2040478 (TATAAC)n S imple_repeat 1 102 chr2 2043209 2043280 (TCCTCT)n S imple_repeat 1 72 chr2 2043903 2043949 (TTTCA)n S imple_repeat 1 51 chr2 2044876 2044914 (GTT)n S imple_repeat 1 39 chr2 2047001 2047032 (CAATGT)n S imple_repeat 1 32 chr2 2047060 2047114 (TCACTG)n S imple_repeat 1 55 chr2 2047118 2047164 (TCC)n S imple_repeat 1 47 chr2 2050686 2050730 (CTC)n S imple_repeat 1 46 chr2 2051325 2051360 (A)n S imple_repeat 1 36 chr2 2053332 2053356 (TTC)n S imple_repeat 1 25 chr2 2056395 2056424 (A)n S imple_repeat 1 30 chr2 2061650 2061698 (TC)n S imple_repeat 1 51 chr2 2069129 2069177 GA-rich L ow_complexity 1 49 chr2 2071515 2071552 (ATTTT)n S imple_repeat 1 41 chr2 2074291 2074347 MamRTE1 L INE/RTE-BovB 2819 2 883 chr2 2077399 2077444 (ATT)n S imple_repeat 1 47 chr2 2081163 2081229 (TAATT)n S imple_repeat 1 72 chr2 2084932 2084989 (CGGTGCG)n S imple_repeat 1 59 chr2 2085938 2086055 (ATCTTC)n S imple_repeat 1 118 chr2 2086317 2086358 (TCGTCC)n S imple_repeat 1 42 chr2 2088516 2088631 (TTATCCA)n S imple_repeat 1 129 chr2 2091006 2091039 A-rich L ow_complexity 1 34 chr2 2094084 2094476 L1MEg L INE/L1 3083 3 344 ( chr2 2096328 2096410 A-rich L ow_complexity 1 89 chr2 2098115 2098167 (TAGGATTTG)n S imple_repeat 1 53 chr2 2098726 2098763 (TTAT)n S imple_repeat 1 38 chr2 2099018 2099195 (TTG)n S imple_repeat 1 178 chr2 2101539 2101792 A-rich L ow_complexity 1 254 chr2 2102011 2102168 (GATAGGA)n S imple_repeat 1 161 chr2 2102438 2102533 (GTGAT)n S imple_repeat 1 99 chr2 2107128 2107193 (GTGCA)n S imple_repeat 1 69 chr2 2107390 2107440 (ATTT)n S imple_repeat 1 53 chr2 2107393 2107431 (TATTTAT)n S imple_repeat 1 39 chr2 2107964 2108040 (TGAA)n S imple_repeat 1 83 chr2 2109448 2109499 GA-rich L ow_complexity 1 53 chr2 2109864 2109999 (GTATTAGTTG)n S imple_repeat 1 140 chr2 2110047 2110082 (ATATTA)n S imple_repeat 1 37 chr2 2110598 2110682 (TTCACA)n S imple_repeat 1 92 chr2 2112469 2112538 A-rich L ow_complexity 1 68 chr2 2114945 2115015 A-rich L ow_complexity 1 71 chr2 2118278 2118347 (TATT)n S imple_repeat 1 70 chr2 2119362 2119444 A-rich L ow_complexity 1 84 chr2 2121519 2121550 (TTGGCT)n S imple_repeat 1 32 chr2 2122947 2123066 (ATGAAGA)n S imple_repeat 1 127 chr2 2124663 2124775 (CGGAGT)n S imple_repeat 1 114 chr2 2125850 2125895 G-rich L ow_complexity 1 46 chr2 2126974 2127025 (CTTAGCTCA)n S imple_repeat 1 52 chr2 2127086 2127158 (TCCTATT)n S imple_repeat 1 74 chr2 2129332 2129348 (T)n S imple_repeat 1 17 chr2 2131818 2131885 (TCG)n S imple_repeat 1 69 chr2 2133040 2133097 (TTT)n S imple_repeat 1 58 chr2 2133160 2133229 (TTTC)n S imple_repeat 1 72 chr2 2135868 2135907 (TCCT)n S imple_repeat 1 44 chr2 2136202 2136273 (CGTCAATAT)n S imple_repeat 1 72 chr2 2137191 2137266 (TCA)n S imple_repeat 1 79 chr2 2137233 2137279 (TCATCC)n S imple_repeat 1 47 chr2 2137457 2137527 (CTCGTC)n S imple_repeat 1 72 chr2 2137500 2137532 (TCGTAA)n S imple_repeat 1 33 chr2 2137581 2137609 (TCC)n S imple_repeat 1 29 chr2 2140610 2140653 (CAT)n S imple_repeat 1 45 chr2 2143443 2143475 A-rich L ow_complexity 1 33 chr2 2145386 2145425 (TTTA)n S imple_repeat 1 40 chr2 2152040 2152072 (GATGCA)n S imple_repeat 1 34 chr2 2155678 2155708 (T)n S imple_repeat 1 31 chr2 2156746 2156783 (ATGAAGAT)n S imple_repeat 1 38 chr2 2159088 2159673 (ATTACT)n S imple_repeat 1 610 chr2 2162941 2162991 A-rich L ow_complexity 1 51 chr2 2166338 2166385 (GTGTAAC)n S imple_repeat 1 49 chr2 2167114 2167150 (GTAGA)n S imple_repeat 1 37 chr2 2167313 2167379 A-rich L ow_complexity 1 70 chr2 2168853 2168883 (TTTA)n S imple_repeat 1 32 chr2 2168929 2168947 (T)n S imple_repeat 1 19 chr2 2171209 2171269 (TAACTA)n S imple_repeat 1 62 chr2 2173462 2173508 (TATCAAT)n S imple_repeat 1 49 chr2 2176047 2176071 (T)n S imple_repeat 1 25 chr2 2176108 2176129 (AT)n S imple_repeat 1 22 chr2 2178570 2178614 (T)n S imple_repeat 1 45 chr2 2186077 2186105 (TCC)n S imple_repeat 1 29 chr2 2186742 2186786 (TTCAC)n S imple_repeat 1 45 chr2 2198889 2198912 (TATA)n S imple_repeat 1 24 chr2 2199096 2199135 (TTTTATT)n S imple_repeat 1 40 chr2 2201784 2201811 (ATG)n S imple_repeat 1 28 chr2 2204319 2204349 (TTTTAT)n S imple_repeat 1 32 chr2 2204324 2204342 (T)n S imple_repeat 1 19 chr2 2207158 2207240 (TTATGA)n S imple_repeat 1 87 chr2 2210524 2210580 A-rich L ow_complexity 1 57 chr2 2211295 2211324 (TTATT)n S imple_repeat 1 31 chr2 2213464 2213503 GA-rich L ow_complexity 1 40 chr2 2213923 2213950 (A)n S imple_repeat 1 28 chr2 2220074 2220122 (CCG)n S imple_repeat 1 50 chr2 2220304 2220368 (CCTTAG)n S imple_repeat 1 65 chr2 2221892 2221910 (A)n S imple_repeat 1 19 chr2 2222397 2222492 A-rich L ow_complexity 1 96 chr2 2225233 2225262 (CGCGCA)n S imple_repeat 1 32 chr2 2226122 2226190 (GTATTT)n S imple_repeat 1 73 chr2 2226593 2226662 A-rich L ow_complexity 1 74 chr2 2229944 2229998 (TTTTCT)n S imple_repeat 1 56 chr2 2233105 2233142 (TTCCGTC)n S imple_repeat 1 39 chr2 2235666 2235729 (TGAT)n S imple_repeat 1 65 chr2 2235821 2235884 (AAGGTAG)n S imple_repeat 1 68 chr2 2239473 2239528 (CATTT)n S imple_repeat 1 58 chr2 2240067 2240091 (TAT)n S imple_repeat 1 26 chr2 2240272 2240365 (TCTTT)n S imple_repeat 1 96 chr2 2240475 2240517 (AACTTT)n S imple_repeat 1 43 chr2 2240829 2240867 (AATACTACC)n S imple_repeat 1 39 chr2 2240991 2241096 (TCATC)n S imple_repeat 1 109 chr2 2241994 2242024 (ACGCGC)n S imple_repeat 1 32 chr2 2242919 2242953 (GTATGT)n S imple_repeat 1 35 chr2 2245127 2245220 (TCTTCA)n S imple_repeat 1 99 chr2 2246338 2246375 (TTCTT)n S imple_repeat 1 39 chr2 2247022 2247046 (A)n S imple_repeat 1 25 chr2 2247064 2247101 (TTC)n S imple_repeat 1 40 chr2 2252611 2252701 (CACACTA)n S imple_repeat 1 95 chr2 2253455 2253504 (TGGATG)n S imple_repeat 1 50 chr2 2254503 2254557 (GTA)n S imple_repeat 1 55 chr2 2263637 2263665 (T)n S imple_repeat 1 29 chr2 2273488 2273519 (TTTCCTT)n S imple_repeat 1 32 chr2 2280596 2280687 (TTTTCTT)n S imple_repeat 1 93 chr2 2281131 2281185 GA-rich L ow_complexity 1 56 chr2 2282150 2282197 (CAG)n S imple_repeat 1 49 chr2 2283395 2283436 A-rich L ow_complexity 1 42 chr2 2285281 2285312 (TTTAT)n S imple_repeat 1 33 chr2 2287835 2287854 (CTC)n S imple_repeat 1 20 chr2 2288743 2288779 (ATTTTTC)n S imple_repeat 1 40 chr2 2290379 2290395 (T)n S imple_repeat 1 17 chr2 2290795 2290827 A-rich L ow_complexity 1 33 chr2 2294269 2294304 (ATTTGATG)n S imple_repeat 1 37 chr2 2296204 2296244 GA-rich L ow_complexity 1 41 chr2 2299586 2299643 (AAAGT)n S imple_repeat 1 58 chr2 2302583 2302640 (TAA)n S imple_repeat 1 60 chr2 2303060 2303140 (GAT)n S imple_repeat 1 82 chr2 2304303 2304385 (ATG)n S imple_repeat 1 83 chr2 2315236 2315254 (T)n S imple_repeat 1 19 chr2 2315640 2315669 A-rich L ow_complexity 1 32 chr2 2319344 2319461 A-rich L ow_complexity 1 120 chr2 2320141 2320194 GA-rich L ow_complexity 1 55 chr2 2321257 2321286 (TGA)n S imple_repeat 1 30 chr2 2331179 2331234 (CTG)n S imple_repeat 1 56 chr2 2334983 2335036 A-rich L ow_complexity 1 54 chr2 2338954 2338978 (ATG)n S imple_repeat 1 25 chr2 2365634 2365683 GA-rich L ow_complexity 1 54 chr2 2366663 2366689 (GCA)n S imple_repeat 1 27 chr2 2366983 2367016 (CTG)n S imple_repeat 1 34 chr2 2367889 2367942 (TTG)n S imple_repeat 1 54 chr2 2368053 2368168 (TGTTGC)n S imple_repeat 1 121 chr2 2369729 2369790 (AGAACAA)n S imple_repeat 1 65 chr2 2369794 2369840 (TTTTTTTAAT)n S imple_repeat 1 47 chr2 2371026 2371044 (TCT)n S imple_repeat 1 19 chr2 2371911 2371927 (T)n S imple_repeat 1 17 chr2 2372920 2372950 A-rich L ow_complexity 1 31 chr2 2378976 2379002 (ATAA)n S imple_repeat 1 30 chr2 2381420 2381451 (A)n S imple_repeat 1 32 chr2 2385047 2385068 (T)n S imple_repeat 1 22 chr2 2387106 2387141 (T)n S imple_repeat 1 36 chr2 2394529 2394555 (T)n S imple_repeat 1 27 chr2 2396659 2396710 A-rich L ow_complexity 1 52 chr2 2397033 2397051 (T)n S imple_repeat 1 19 chr2 2397373 2397403 A-rich L ow_complexity 1 32 chr2 2397546 2397616 (ATC)n S imple_repeat 1 71 chr2 2399599 2399628 (T)n S imple_repeat 1 30 chr2 2400960 2400987 (T)n S imple_repeat 1 28 chr2 2401887 2401922 GA-rich L ow_complexity 1 37 chr2 2402456 2402583 (GATGAA)n S imple_repeat 1 133 chr2 2403214 2403256 (GACAAGAA)n S imple_repeat 1 47 chr2 2405381 2405421 (TGGAGAA)n S imple_repeat 1 43 chr2 2405880 2405918 (A)n S imple_repeat 1 39 chr2 2408842 2408861 (A)n S imple_repeat 1 20 chr2 2420779 2420797 (CAT)n S imple_repeat 1 19 chr2 2425234 2425264 (A)n S imple_repeat 1 31 chr2 2432715 2432744 (AAG)n S imple_repeat 1 31 chr2 2433129 2433215 A-rich L ow_complexity 1 87 chr2 2435409 2435463 A-rich L ow_complexity 1 55 chr2 2435662 2435707 A-rich L ow_complexity 1 47 chr2 2436649 2436694 (CTCTGT)n S imple_repeat 1 46 chr2 2439912 2439932 (T)n S imple_repeat 1 21 chr2 2448110 2448162 A-rich L ow_complexity 1 53 chr2 2450284 2450313 (A)n S imple_repeat 1 30 chr2 2454663 2454703 (AATA)n S imple_repeat 1 41 chr2 2456915 2456938 (AT)n S imple_repeat 1 24 chr2 2467546 2467574 (T)n S imple_repeat 1 29 chr2 2475502 2475522 (A)n S imple_repeat 1 21 chr2 2476454 2476502 (TTTCAC)n S imple_repeat 1 49 chr2 2476543 2476596 (TCATCA)n S imple_repeat 1 54 chr2 2477796 2477825 A-rich L ow_complexity 1 30 chr2 2482850 2482868 (T)n S imple_repeat 1 19 chr2 2495669 2495704 A-rich L ow_complexity 1 36 chr2 2503732 2503876 GA-rich L ow_complexity 1 146 chr2 2507852 2507900 (GTT)n S imple_repeat 1 50 chr2 2521777 2521795 (A)n S imple_repeat 1 19 chr2 2521795 2521825 (ATCTG)n S imple_repeat 1 32 chr2 2523266 2523341 A-rich L ow_complexity 1 78 chr2 2523303 2523337 (AACAGAA)n S imple_repeat 1 37 chr2 2525437 2525459 (A)n S imple_repeat 1 23 chr2 2528824 2528852 GA-rich L ow_complexity 1 29 chr2 2531367 2531396 (ATG)n S imple_repeat 1 30 chr2 2539453 2539502 (TTG)n S imple_repeat 1 50 chr2 2543524 2543585 (TTTTCT)n S imple_repeat 1 60 chr2 2545488 2545529 (TTGTTG)n S imple_repeat 1 44 chr2 2556618 2556647 A-rich L ow_complexity 1 30 chr2 2562397 2562420 (T)n S imple_repeat 1 24 chr2 2567482 2567544 (CAG)n S imple_repeat 1 63 chr2 2567545 2567589 (CAA)n S imple_repeat 1 45 chr2 2567590 2567610 (CAG)n S imple_repeat 1 21 chr2 2569239 2569267 A-rich L ow_complexity 1 29 chr2 2574417 2574453 (TTAT)n S imple_repeat 1 37 chr2 2577455 2577484 (CTCCC)n S imple_repeat 1 30 chr2 2582654 2582688 (ATA)n S imple_repeat 1 37 chr2 2582732 2582807 GA-rich L ow_complexity 1 76 chr2 2588434 2588452 (TA)n S imple_repeat 1 19 chr2 2595238 2595270 (CTTC)n S imple_repeat 1 35 chr2 2595554 2595588 (GATCTC)n S imple_repeat 1 35 chr2 2595728 2595783 (CTTTC)n S imple_repeat 1 57 chr2 2597156 2597180 (A)n S imple_repeat 1 25 chr2 2603890 2603923 (AATAA)n S imple_repeat 1 34 chr2 2604390 2604452 GA-rich L ow_complexity 1 63 chr2 2610090 2610119 A-rich L ow_complexity 1 30 chr2 2613351 2613379 (AAAG)n S imple_repeat 1 30 chr2 2614551 2614600 A-rich L ow_complexity 1 53 chr2 2624692 2624747 A-rich L ow_complexity 1 62 chr2 2626087 2626244 A-rich L ow_complexity 1 159 chr2 2626523 2626588 tRNA-Leu-TTG t RNA 8 72 chr2 2626600 2626635 (TTAATTT)n S imple_repeat 1 38 chr2 2631815 2631843 A-rich L ow_complexity 1 31 chr2 2632243 2632266 (T)n S imple_repeat 1 24 chr2 2633222 2633300 (T)n S imple_repeat 1 79 chr2 2637689 2637774 A-rich L ow_complexity 1 86 chr2 2640228 2640244 (A)n S imple_repeat 1 17 chr2 2642261 2642289 (ACTTT)n S imple_repeat 1 29 chr2 2646010 2646065 (TCATCA)n S imple_repeat 1 56 chr2 2658163 2658218 (CATCTT)n S imple_repeat 1 58 chr2 2660140 2660232 (ATC)n S imple_repeat 1 95 chr2 2661475 2661510 A-rich L ow_complexity 1 36 chr2 2662538 2662558 (T)n S imple_repeat 1 21 chr2 2664187 2664203 (AAG)n S imple_repeat 1 17 chr2 2672197 2672223 (CTT)n S imple_repeat 1 27 chr2 2672881 2672899 (A)n S imple_repeat 1 19 chr2 2678370 2678397 (A)n S imple_repeat 1 28 chr2 2690727 2690768 (TTACT)n S imple_repeat 1 44 chr2 2695817 2695872 (ACCAAT)n S imple_repeat 1 57 chr2 2707341 2707420 (GATGAA)n S imple_repeat 1 83 chr2 2708929 2708960 (TCA)n S imple_repeat 1 32 chr2 2719566 2719589 (GAAA)n S imple_repeat 1 25 chr2 2722722 2722754 (ACA)n S imple_repeat 1 33 chr2 2733158 2733212 (TTGT)n S imple_repeat 1 53 chr2 2733439 2733486 (TTTATT)n S imple_repeat 1 51 chr2 2735800 2735824 (A)n S imple_repeat 1 25 chr2 2737791 2737824 A-rich L ow_complexity 1 34 chr2 2742445 2742485 A-rich L ow_complexity 1 41 chr2 2744914 2744939 (A)n S imple_repeat 1 26 chr2 2745082 2745119 A-rich L ow_complexity 1 38 chr2 2746333 2746359 A-rich L ow_complexity 1 27 chr2 2746674 2746784 A-rich L ow_complexity 1 120 chr2 2749251 2749460 (TTTTA)n S imple_repeat 1 216 chr2 2751694 2751766 (AGTGT)n S imple_repeat 1 75 chr2 2752078 2752107 (CTC)n S imple_repeat 1 30 chr2 2752710 2752733 (T)n S imple_repeat 1 24 chr2 2753760 2753803 (GAGAACG)n S imple_repeat 1 51 chr2 2755931 2755983 GA-rich L ow_complexity 1 54 chr2 2759292 2759320 (T)n S imple_repeat 1 29 chr2 2762514 2762561 (TGAA)n S imple_repeat 1 50 chr2 2767965 2768026 A-rich L ow_complexity 1 63 chr2 2768086 2768251 L1M5 L INE/L1 3018 3 185 ( chr2 2774369 2774408 (ATTT)n S imple_repeat 1 42 chr2 2776231 2776335 (TGAA)n S imple_repeat 1 115 chr2 2779038 2779059 (A)n S imple_repeat 1 22 chr2 2781696 2781741 (TA)n S imple_repeat 1 49 chr2 2782948 2782981 (ATGAAT)n S imple_repeat 1 34 chr2 2784740 2784789 (GAGGTG)n S imple_repeat 1 52 chr2 2784829 2784869 (CATTTT)n S imple_repeat 1 41 chr2 2784870 2784934 (TCATCT)n S imple_repeat 1 65 chr2 2784935 2784972 (CATTTT)n S imple_repeat 6 44 chr2 2786821 2786862 (CGCCG)n S imple_repeat 1 43 chr2 2789457 2789485 (GCATTT)n S imple_repeat 1 32 chr2 2793056 2793088 (CTC)n S imple_repeat 1 33 chr2 2794389 2794470 (TCTTCT)n S imple_repeat 1 87 chr2 2794864 2794884 (A)n S imple_repeat 1 21 chr2 2803355 2803487 (GGAGTT)n S imple_repeat 1 133 chr2 2803488 2803658 (TTGTTG)n S imple_repeat 1 171 chr2 2805643 2805675 (ACTTA)n S imple_repeat 1 36 chr2 2811643 2811675 (AAACG)n S imple_repeat 1 33 chr2 2811678 2811727 (AGAATAA)n S imple_repeat 1 52 chr2 2811908 2812007 (TTTTTTA)n S imple_repeat 1 96 chr2 2813550 2813616 (GCA)n S imple_repeat 1 68 chr2 2813768 2813857 (CGCAGC)n S imple_repeat 1 91 chr2 2821191 2821311 (ACAT)n S imple_repeat 1 121 chr2 2822250 2822298 A-rich L ow_complexity 1 49 chr2 2824933 2824966 (A)n S imple_repeat 1 34 chr2 2826663 2826696 (TTTTA)n S imple_repeat 1 35 chr2 2826957 2826985 A-rich L ow_complexity 1 29 chr2 2831272 2831315 A-rich L ow_complexity 1 46 chr2 2834814 2834849 (TCT)n S imple_repeat 1 37 chr2 2837544 2837566 (T)n S imple_repeat 1 23 chr2 2837633 2837659 A-rich L ow_complexity 1 27 chr2 2838230 2838320 (TGA)n S imple_repeat 1 91 chr2 2842075 2842135 (GATGAA)n S imple_repeat 1 63 chr2 2844530 2844566 A-rich L ow_complexity 1 37 chr2 2846205 2846257 (GAT)n S imple_repeat 1 53 chr2 2846834 2846921 A-rich L ow_complexity 1 89 chr2 2851576 2851614 (T)n S imple_repeat 1 39 chr2 2854564 2854597 (CTCATC)n S imple_repeat 1 34 chr2 2856562 2856622 (TTCCTG)n S imple_repeat 1 65 chr2 2859166 2859204 (TTATTT)n S imple_repeat 1 41 chr2 2861537 2861594 (TTTCGA)n S imple_repeat 1 59 chr2 2862382 2862416 A-rich L ow_complexity 1 35 chr2 2865711 2865728 (T)n S imple_repeat 1 18 chr2 2873637 2873670 (TTTCT)n S imple_repeat 1 34 chr2 2873721 2873746 (TA)n S imple_repeat 1 26 chr2 2877578 2877632 (ATATC)n S imple_repeat 1 57 chr2 2878998 2879020 (T)n S imple_repeat 1 23 chr2 2881738 2881762 (CTT)n S imple_repeat 1 25 chr2 2887046 2887089 A-rich L ow_complexity 1 44 chr2 2887983 2888049 (AAGAGATA)n S imple_repeat 1 71 chr2 2891687 2891715 (T)n S imple_repeat 1 29 chr2 2894266 2894292 (ACCA)n S imple_repeat 1 27 chr2 2900419 2900448 (GT)n S imple_repeat 1 30 chr2 2900482 2900512 (T)n S imple_repeat 1 31 chr2 2900631 2900666 (TATTTC)n S imple_repeat 1 36 chr2 2900821 2900838 (A)n S imple_repeat 1 18 chr2 2906569 2906621 (TGA)n S imple_repeat 1 53 chr2 2913692 2913724 A-rich L ow_complexity 1 33 chr2 2915872 2915906 A-rich L ow_complexity 1 37 chr2 2916255 2916376 (TTATTC)n S imple_repeat 1 124 chr2 2929103 2929144 (TTAATCA)n S imple_repeat 1 44 chr2 2936957 2937024 tRNA-Leu-CTA_ t RNA 5 72 chr2 2940730 2940752 (AAG)n S imple_repeat 1 23 chr2 2942807 2942840 L3 L INE/CR1 96 130 ( chr2 2944174 2944236 (AATATGA)n S imple_repeat 1 64 chr2 2944450 2944484 (CAATTT)n S imple_repeat 1 35 chr2 2954609 2954632 (TCA)n S imple_repeat 1 24 chr2 2963374 2963408 (T)n S imple_repeat 1 35 chr2 2969288 2969336 A-rich L ow_complexity 1 49 chr2 2978340 2978379 (TCATTTT)n S imple_repeat 1 42 chr2 2979459 2979525 A-rich L ow_complexity 1 67 chr2 2981482 2981519 A-rich L ow_complexity 1 39 chr2 2982245 2982274 (ATAG)n S imple_repeat 1 31 chr2 2985429 2985460 (CATCTT)n S imple_repeat 1 33 chr2 2987480 2987512 A-rich L ow_complexity 1 33 chr2 2989551 2989579 A-rich L ow_complexity 1 29 chr2 2989683 2989714 A-rich L ow_complexity 1 33 chr2 2995435 2995531 (TCCATC)n S imple_repeat 1 100 chr2 2996935 2997075 A-rich L ow_complexity 1 144 chr2 3012441 3012492 (TGGCGC)n S imple_repeat 1 48 chr2 3017753 3017793 (GGCCCT)n S imple_repeat 1 42 chr2 3018483 3018519 (ATAATG)n S imple_repeat 1 37 chr2 3018541 3018563 (CAAA)n S imple_repeat 1 23 chr2 3018603 3018647 (TTTA)n S imple_repeat 1 45 chr2 3019146 3019222 (ATAC)n S imple_repeat 1 81 chr2 3024885 3024944 (CACAGC)n S imple_repeat 1 67 chr2 3027161 3027235 (GAGAAT)n S imple_repeat 1 75 chr2 3028859 3028896 GA-rich L ow_complexity 1 38 chr2 3032292 3032332 (CAA)n S imple_repeat 1 41 chr2 3036583 3036625 (ATATAT)n S imple_repeat 1 44 chr2 3037740 3037773 A-rich L ow_complexity 1 34 chr2 3038114 3038266 (TATTCT)n S imple_repeat 1 161 chr2 3038747 3038861 (TTC)n S imple_repeat 1 121 chr2 3047523 3047577 GA-rich L ow_complexity 1 56 chr2 3047749 3047804 GA-rich L ow_complexity 1 56 chr2 3048604 3048699 (GAAGAT)n S imple_repeat 1 99 chr2 3055265 3055287 (GAT)n S imple_repeat 1 23 chr2 3064573 3064610 (CAGTTCG)n S imple_repeat 1 38 chr2 3068051 3068078 (CA)n S imple_repeat 1 28 chr2 3069307 3069357 (TTTTTT)n S imple_repeat 1 51 chr2 3079803 3079933 A-rich L ow_complexity 1 131 chr2 3095307 3095325 (TCT)n S imple_repeat 1 19 chr2 3096646 3096725 (ATTCTGATA)n S imple_repeat 1 90 chr2 3096890 3096929 (AACAGATG)n S imple_repeat 1 43 chr2 3099715 3099739 (A)n S imple_repeat 1 25 chr2 3102691 3102754 A-rich L ow_complexity 1 64 chr2 3104540 3104563 (A)n S imple_repeat 1 24 chr2 3114273 3114346 A-rich L ow_complexity 1 74 chr2 3114967 3115017 (AATGT)n S imple_repeat 1 52 chr2 3116706 3116728 (CAC)n S imple_repeat 1 23 chr2 3117495 3117518 (T)n S imple_repeat 1 24 chr2 3121799 3121830 (TTTTA)n S imple_repeat 1 34 chr2 3126865 3126943 (TTTAC)n S imple_repeat 1 83 chr2 3127218 3127253 (AAT)n S imple_repeat 1 36 chr2 3127526 3127570 (T)n S imple_repeat 1 45 chr2 3130280 3130307 (TCC)n S imple_repeat 1 28 chr2 3131873 3131903 (ACTCGG)n S imple_repeat 1 31 chr2 3136270 3136310 A-rich L ow_complexity 1 41 chr2 3138758 3138774 (TGC)n S imple_repeat 1 17 chr2 3139147 3139174 (T)n S imple_repeat 1 28 chr2 3139368 3139416 A-rich L ow_complexity 1 50 chr2 3140856 3140875 (T)n S imple_repeat 1 20 chr2 3143542 3143578 (TTTAT)n S imple_repeat 1 35 chr2 3143777 3143804 A-rich L ow_complexity 1 29 chr2 3148814 3148847 (CTT)n S imple_repeat 1 34 chr2 3151458 3151491 A-rich L ow_complexity 1 34 chr2 3152511 3152537 (TGTTA)n S imple_repeat 1 27 chr2 3154760 3154786 (TGTTA)n S imple_repeat 1 27 chr2 3161550 3161621 (ATTTTGC)n S imple_repeat 1 77 chr2 3163818 3163847 (ACA)n S imple_repeat 1 31 chr2 3165266 3165282 (A)n S imple_repeat 1 17 chr2 3173253 3173297 (AT)n S imple_repeat 1 47 chr2 3177905 3177922 (A)n S imple_repeat 1 18 chr2 3177976 3178019 A-rich L ow_complexity 1 46 chr2 3179383 3179434 (AGC)n S imple_repeat 1 52 chr2 3182331 3182411 (CTTAGC)n S imple_repeat 1 90 chr2 3185929 3185962 (CAGCAA)n S imple_repeat 1 34 chr2 3190287 3190313 (CAT)n S imple_repeat 1 27 chr2 3193444 3193486 GA-rich L ow_complexity 1 43 chr2 3204557 3204579 (A)n S imple_repeat 1 23 chr2 3205577 3205728 (TCTTTTT)n S imple_repeat 1 155 chr2 3206446 3206502 (GGTCGC)n S imple_repeat 1 58 chr2 3207167 3207194 (CAG)n S imple_repeat 1 28 chr2 3208239 3208271 (TTCTTT)n S imple_repeat 1 33 chr2 3210672 3210715 A-rich L ow_complexity 1 45 chr2 3210673 3210707 (AAT)n S imple_repeat 1 38 chr2 3213249 3213276 (A)n S imple_repeat 1 28 chr2 3213300 3213343 (TTTATT)n S imple_repeat 1 46 chr2 3217384 3217418 A-rich L ow_complexity 1 35 chr2 3222725 3222759 (TTCATC)n S imple_repeat 1 35 chr2 3223520 3223553 (A)n S imple_repeat 1 34 chr2 3231121 3231190 tRNA-Arg-AGA t RNA 6 72 chr2 3236077 3236106 (A)n S imple_repeat 1 30 chr2 3236127 3236146 (A)n S imple_repeat 1 20 chr2 3236665 3236717 (GGATGA)n S imple_repeat 1 56 chr2 3237786 3237833 (TATTA)n S imple_repeat 1 50 chr2 3241159 3241192 (TTTTCAC)n S imple_repeat 1 34 chr2 3246305 3246353 (AGA)n S imple_repeat 1 52 chr2 3247175 3247212 (TGT)n S imple_repeat 1 38 chr2 3248444 3248482 A-rich L ow_complexity 1 39 chr2 3254532 3254566 (TTTCA)n S imple_repeat 1 38 chr2 3265416 3265452 (ATAAAAA)n S imple_repeat 1 38 chr2 3268549 3268585 (TTCTATA)n S imple_repeat 1 37 chr2 3271448 3271502 A-rich L ow_complexity 1 57 chr2 3274317 3274341 (T)n S imple_repeat 1 25 chr2 3279767 3279788 (T)n S imple_repeat 1 22 chr2 3291405 3291440 (GAATAA)n S imple_repeat 1 37 chr2 3320516 3320550 (TGA)n S imple_repeat 1 35 chr3 52439 52480 A-rich Low_complexity 1 43 chr3 53622 53640 (TA)n Simple_repeat 1 19 chr3 63367 63394 (TTA)n Simple_repeat 1 27 chr3 64680 64711 A-rich Low_complexity 1 33 chr3 68040 68092 A-rich Low_complexity 1 49 chr3 68343 68388 A-rich Low_complexity 1 46 chr3 82930 82979 (CCTGAT)n Simple_repeat 1 50 chr3 87191 87215 (GAA)n Simple_repeat 1 25 chr3 87346 87399 GA-rich Low_complexity 1 53 chr3 91073 91102 (TTCTC)n Simple_repeat 1 30 chr3 96581 96675 MamRTE1 LINE/RTE-BovB 3614 3 712 chr3 100854 100911 GA-rich Low_complexity 1 61 chr3 100969 100986 (AAC)n Simple_repeat 1 18 chr3 100997 101014 (T)n Simple_repeat 1 18 chr3 105106 105132 A-rich Low_complexity 1 27 chr3 105328 105406 (ACA)n Simple_repeat 1 79 chr3 137360 137388 A-rich Low_complexity 1 29 chr3 158174 158241 (A)n Simple_repeat 1 68 chr3 158475 158494 (A)n Simple_repeat 1 20 chr3 160518 160563 (GCT)n Simple_repeat 1 47 chr3 173639 173695 A-rich Low_complexity 1 59 chr3 174281 174341 (TGATTC)n Simple_repeat 1 61 chr3 174893 174919 (T)n Simple_repeat 1 27 chr3 179631 179661 (TGCCTG)n Simple_repeat 1 31 chr3 179712 179810 (CTT)n Simple_repeat 1 96 chr3 183053 183068 (TCA)n Simple_repeat 1 62 chr3 183069 183114 (TCCTCA)n Simple_repeat 1 46 chr3 184201 184229 (TAA)n Simple_repeat 1 30 chr3 185439 185484 A-rich Low_complexity 1 49 chr3 190075 190132 A-rich Low_complexity 1 58 chr3 192302 192336 (AAATA)n Simple_repeat 1 36 chr3 204507 204539 (ATTTT)n Simple_repeat 1 30 chr3 214051 214100 A-rich Low_complexity 1 50 chr3 216130 216200 (TTATTGTTG)n Simple_repeat 1 72 chr3 220993 221049 (GATGAT)n Simple_repeat 1 55 chr3 222361 222381 (TA)n Simple_repeat 1 21 chr3 224511 224545 A-rich Low_complexity 1 35 chr3 231705 231742 (TATTT)n Simple_repeat 1 36 chr3 234039 234063 (A)n Simple_repeat 1 25 chr3 236057 236078 (AT)n Simple_repeat 1 23 chr3 236461 236524 (TTTTATT)n Simple_repeat 1 66 chr3 238065 238082 (AAC)n Simple_repeat 1 18 chr3 239000 239023 (T)n Simple_repeat 1 24 chr3 239064 239086 (A)n Simple_repeat 1 23 chr3 240260 240293 A-rich Low_complexity 1 33 chr3 242722 242813 GA-rich Low_complexity 1 90 chr3 245530 245588 GA-rich Low_complexity 1 59 chr3 245946 246001 (AAGATG)n Simple_repeat 1 52 chr3 246663 246743 GA-rich Low_complexity 1 81 chr3 247214 247262 (TCA)n Simple_repeat 1 49 chr3 255243 255273 GA-rich Low_complexity 1 31 chr3 256962 256988 (TGA)n Simple_repeat 1 27 chr3 258971 259013 (TCT)n Simple_repeat 1 42 chr3 259014 259087 (CAGCAG)n Simple_repeat 1 73 chr3 263268 263295 (TTTA)n Simple_repeat 1 27 chr3 263695 263766 (TTA)n Simple_repeat 1 72 chr3 265400 265428 (GCT)n Simple_repeat 1 29 chr3 272103 272134 (ATATAT)n Simple_repeat 1 32 chr3 274551 274597 A-rich Low_complexity 1 47 chr3 274812 274859 (CAT)n Simple_repeat 1 48 chr3 278175 278237 A-rich Low_complexity 1 68 chr3 281262 281294 (AGTAA)n Simple_repeat 1 31 chr3 282134 282174 (AAT)n Simple_repeat 1 41 chr3 282727 282770 (AAAT)n Simple_repeat 1 43 chr3 282771 282806 A-rich Low_complexity 2 84 chr3 298535 298564 (TATA)n Simple_repeat 1 30 chr3 301027 301061 (CATTTT)n Simple_repeat 1 32 chr3 304219 304256 (ACA)n Simple_repeat 1 40 chr3 304797 304819 (A)n Simple_repeat 1 23 chr3 309090 309143 (CAG)n Simple_repeat 1 54 chr3 309235 309331 (AGC)n Simple_repeat 1 97 chr3 309989 310014 (GCATCT)n Simple_repeat 1 26 chr3 310238 310276 (TTTTTC)n Simple_repeat 1 39 chr3 310518 310525 (AAGAAT)n Simple_repeat 1 65 chr3 310526 310550 (AACAAG)n Simple_repeat 1 52 chr3 310551 310575 (AAT)n Simple_repeat 1 25 chr3 312755 312796 A-rich Low_complexity 1 42 chr3 325484 325513 (TCATCG)n Simple_repeat 1 30 chr3 338043 338134 (ATGAAG)n Simple_repeat 1 95 chr3 340535 340578 (TTA)n Simple_repeat 1 47 chr3 343296 343314 (TA)n Simple_repeat 1 19 chr3 348084 348122 (CCA)n Simple_repeat 1 39 chr3 356107 356151 GA-rich Low_complexity 1 45 chr3 362056 362088 (ATG)n Simple_repeat 1 33 chr3 365383 365429 (TCATCC)n Simple_repeat 1 44 chr3 365895 365944 (TTC)n Simple_repeat 1 52 chr3 369784 369821 (TCA)n Simple_repeat 1 38 chr3 370716 370754 (TTTCTGT)n Simple_repeat 1 39 chr3 374824 374878 (TAATAA)n Simple_repeat 1 55 chr3 387164 387200 (TATTCTG)n Simple_repeat 1 37 chr3 389823 389839 (T)n Simple_repeat 1 17 chr3 394503 394547 (AAGATA)n Simple_repeat 1 44 chr3 398370 398402 (T)n Simple_repeat 1 33 chr3 403214 403257 A-rich Low_complexity 1 48 chr3 404088 404132 A-rich Low_complexity 1 41 chr3 407339 407419 tRNA-Ser-TCG tRNA 7 75 chr3 408911 408959 (AGTAGA)n Simple_repeat 1 52 chr3 410515 410534 (AT)n Simple_repeat 1 20 chr3 421271 421304 (TTACT)n Simple_repeat 1 32 chr3 423229 423282 tRNA-Thr-ACG tRNA 8 61 chr3 432848 432875 GA-rich Low_complexity 1 29 chr3 433576 433648 tRNA-Ala-GCY_ tRNA -3 72 chr3 437504 437599 (TATTT)n Simple_repeat 1 96 chr3 439773 439823 (TTCCTTT)n Simple_repeat 1 52 chr3 445901 445942 (TTCTTTA)n Simple_repeat 1 39 chr3 447366 447421 (ATC)n Simple_repeat 1 56 chr3 449715 449754 (AT)n Simple_repeat 1 40 chr3 454226 454247 (A)n Simple_repeat 1 22 chr3 456696 456734 (TGA)n Simple_repeat 1 39 chr3 457456 457478 (AT)n Simple_repeat 1 24 chr3 475593 475611 (CTT)n Simple_repeat 1 19 chr3 476631 476695 (TTCCT)n Simple_repeat 1 60 chr3 476819 476848 A-rich Low_complexity 1 30 chr3 481809 481854 (ATTTAG)n Simple_repeat 1 45 chr3 492141 492174 A-rich Low_complexity 1 34 chr3 500414 500441 (TGA)n Simple_repeat 1 28 chr3 501250 501276 (TA)n Simple_repeat 1 27 chr3 503530 503573 (GTT)n Simple_repeat 1 46 chr3 507774 507819 A-rich Low_complexity 1 46 chr3 516292 516355 (TTTT)n Simple_repeat 1 64 chr3 521602 521626 (AT)n Simple_repeat 1 25 chr3 570309 570355 (TTCCTTT)n Simple_repeat 1 44 chr3 573468 573527 (ATTT)n Simple_repeat 1 59 chr3 574172 574232 (TTCTTCA)n Simple_repeat 1 64 chr3 574405 574442 (AT)n Simple_repeat 1 38 chr3 575046 575093 (TTTTTTC)n Simple_repeat 1 48 chr3 580630 580685 tRNA-Gly-GGA tRNA -12 63 chr3 588327 588367 (TTTATA)n Simple_repeat 1 37 chr3 603410 603434 (T)n Simple_repeat 1 25 chr3 615854 615879 (A)n Simple_repeat 1 26 chr3 618768 618808 A-rich Low_complexity 1 41 chr3 622955 622986 A-rich Low_complexity 1 35 chr3 630386 630409 (AATAT)n Simple_repeat 1 27 chr3 631298 631359 (TCC)n Simple_repeat 1 62 chr3 643446 643470 (TA)n Simple_repeat 1 25 chr3 647797 647844 (TCTTCC)n Simple_repeat 1 48 chr3 649651 649703 (AT)n Simple_repeat 1 52 chr3 655647 655722 L3 LINE/CR1 (2328) 1 771 chr3 662526 662588 (TTGCTT)n Simple_repeat 1 64 chr3 662613 662651 (TAATT)n Simple_repeat 1 36 chr3 662909 662943 (TTTTTA)n Simple_repeat 1 35 chr3 669091 669126 (TCTCT)n Simple_repeat 1 39 chr3 680288 680343 (CATCAG)n Simple_repeat 1 56 chr3 684142 684228 (AGAATA)n Simple_repeat 1 91 chr3 690508 690539 (AAG)n Simple_repeat 1 32 chr3 703326 703359 A-rich Low_complexity 1 34 chr3 705735 705767 A-rich Low_complexity 1 34 chr3 708069 708121 (TAA)n Simple_repeat 1 54 chr3 708532 708556 (CTT)n Simple_repeat 1 25 chr3 711463 711502 (GAC)n Simple_repeat 1 40 chr3 711959 712032 (CTTCT)n Simple_repeat 1 77 chr3 712651 712680 A-rich Low_complexity 1 30 chr3 714444 714493 (GATAAT)n Simple_repeat 1 50 chr3 718135 718178 A-rich Low_complexity 1 44 chr3 734474 734528 (AAAAT)n Simple_repeat 1 55 chr3 737741 737818 A-rich Low_complexity 1 105 chr3 737819 737848 (GAAAG)n Simple_repeat 1 28 chr3 754868 754892 (AAATG)n Simple_repeat 1 27 chr3 755423 755456 (ATGGTG)n Simple_repeat 1 37 chr3 755522 755568 (TC)n Simple_repeat 1 46 chr3 756456 756500 (TCCTCA)n Simple_repeat 1 45 chr3 758967 758993 (TTTG)n Simple_repeat 1 27 chr3 764656 764674 (GGA)n Simple_repeat 1 19 chr3 764856 764891 GA-rich Low_complexity 1 36 chr3 766650 766675 (AGG)n Simple_repeat 1 26 chr3 766942 766991 (ATTTTT)n Simple_repeat 1 50 chr3 773522 773598 (AGC)n Simple_repeat 1 71 chr3 775219 775242 (T)n Simple_repeat 1 24 chr3 776590 776979 (CTAATA)n Simple_repeat 1 396 chr3 778064 778124 (CTGCCC)n Simple_repeat 1 58 chr3 778260 778305 (TCATCT)n Simple_repeat 1 45 chr3 782064 782090 (GAC)n Simple_repeat 1 27 chr3 784278 784318 A-rich Low_complexity 1 41 chr3 787137 787175 (TTC)n Simple_repeat 1 39 chr3 791789 791827 A-rich Low_complexity 1 40 chr3 791980 791998 (A)n Simple_repeat 1 19 chr3 796456 796483 (A)n Simple_repeat 1 28 chr3 796730 796761 (GTCGTC)n Simple_repeat 1 36 chr3 798575 798599 (A)n Simple_repeat 1 25 chr3 800794 800839 A-rich Low_complexity 1 49 chr3 801203 801219 (A)n Simple_repeat 1 17 chr3 803630 803652 (T)n Simple_repeat 1 23 chr3 812346 812400 (TATAA)n Simple_repeat 1 58 chr3 814396 814433 (TTCTTGC)n Simple_repeat 1 38 chr3 816633 816686 (TGT)n Simple_repeat 1 54 chr3 816722 816770 (GTT)n Simple_repeat 1 49 chr3 816925 817004 (TGCTGT)n Simple_repeat 1 80 chr3 824125 824148 (A)n Simple_repeat 1 24 chr3 828680 828710 (A)n Simple_repeat 1 31 chr3 832769 832847 A-rich Low_complexity 1 79 chr3 835777 835803 (A)n Simple_repeat 1 27 chr3 837962 837987 (GCA)n Simple_repeat 1 26 chr3 837988 838014 (CTT)n Simple_repeat 1 27 chr3 838647 838677 (A)n Simple_repeat 1 31 chr3 841594 841660 (TTATAT)n Simple_repeat 1 68 chr3 853007 853054 (TG)n Simple_repeat 1 47 chr3 854760 854793 (ATTC)n Simple_repeat 1 35 chr3 855682 855699 (A)n Simple_repeat 1 18 chr3 863300 863382 (TCA)n Simple_repeat 1 83 chr3 863933 863964 (TCCTGC)n Simple_repeat 1 33 chr3 867093 867155 A-rich Low_complexity 1 62 chr3 868334 868364 (ATCTTC)n Simple_repeat 1 31 chr3 868515 868564 (TCCTCT)n Simple_repeat 1 50 chr3 869386 869430 (T)n Simple_repeat 1 45 chr3 869441 869477 A-rich Low_complexity 1 37 chr3 869490 869516 (ATTGG)n Simple_repeat 1 27 chr3 869970 870022 A-rich Low_complexity 1 54 chr3 877887 877913 (A)n Simple_repeat 1 27 chr3 877914 877927 A-rich Low_complexity 12 44 chr3 880067 880116 (TATTTG)n Simple_repeat 1 53 chr3 880198 880214 (TA)n Simple_repeat 1 17 chr3 882329 882377 A-rich Low_complexity 1 49 chr3 904479 904539 tRNA-Arg-AGA tRNA -10 66 chr3 905877 905926 (AT)n Simple_repeat 1 50 chr3 909909 909931 (A)n Simple_repeat 1 23 chr3 915029 915061 (T)n Simple_repeat 1 33 chr3 915652 915716 (ACA)n Simple_repeat 1 67 chr3 919471 919506 (TTTAAT)n Simple_repeat 1 36 chr3 926807 926836 (A)n Simple_repeat 1 30 chr3 927054 927080 (TTC)n Simple_repeat 1 50 chr3 927081 927122 (T)n Simple_repeat 1 42 chr3 927123 927136 (TTC)n Simple_repeat 51 80 chr3 928466 928502 (TTTTAG)n Simple_repeat 1 34 chr3 928936 928964 GA-rich Low_complexity 1 29 chr3 929291 929337 (TGAAGA)n Simple_repeat 1 47 chr3 930662 930692 (TTTCATT)n Simple_repeat 1 31 chr3 930693 930709 (T)n Simple_repeat 1 17 chr3 935878 935945 GA-rich Low_complexity 1 67 chr3 936798 936820 (T)n Simple_repeat 1 23 chr3 937703 937753 A-rich Low_complexity 1 56 chr3 938383 938422 (GCAGGAGC)n Simple_repeat 1 42 chr3 949397 949550 (TGC)n Simple_repeat 1 151 chr3 950514 950560 (T)n Simple_repeat 1 47 chr3 958711 958773 (AATTAT)n Simple_repeat 1 68 chr3 960600 960663 (ACTTCAT)n Simple_repeat 1 63 chr3 964758 964805 (CAACTAGTG)n Simple_repeat 1 48 chr3 966570 966596 (TTTC)n Simple_repeat 1 28 chr3 973253 973344 (ATTTTT)n Simple_repeat 1 90 chr3 973495 973510 (TTTCATC)n Simple_repeat 1 130 chr3 973511 973627 (TCTT)n Simple_repeat 1 114 chr3 975210 975255 (AATTACTT)n Simple_repeat 1 44 chr3 975720 975738 (T)n Simple_repeat 1 19 chr3 976849 976867 (T)n Simple_repeat 1 19 chr3 980811 980846 A-rich Low_complexity 1 36 chr3 986859 986920 A-rich Low_complexity 1 60 chr3 988917 988945 (T)n Simple_repeat 1 29 chr3 993821 993839 (A)n Simple_repeat 1 19 chr3 996060 996107 (T)n Simple_repeat 1 48 chr3 997720 997753 A-rich Low_complexity 1 34 chr3 998609 998639 (TTAT)n Simple_repeat 1 30 chr3 999623 999657 GA-rich Low_complexity 1 35 chr3 1000467 1000595 (ATCCGAACA)n Simple_repeat 1 129 chr3 1000965 1001004 (CAC)n Simple_repeat 1 41 chr3 1001597 1001626 (GA)n Simple_repeat 1 31 chr3 1005995 1006019 (T)n Simple_repeat 1 25 chr3 1007995 1008032 (CTTCTG)n Simple_repeat 1 38 chr3 1009459 1009494 (GGT)n Simple_repeat 1 36 chr3 1010288 1010340 (CAT)n Simple_repeat 1 53 chr3 1011095 1011126 (GAT)n Simple_repeat 1 32 chr3 1015001 1015040 A-rich Low_complexity 1 40 chr3 1018026 1018077 (TTCATC)n Simple_repeat 1 56 chr3 1018541 1018576 (TTCCTCT)n Simple_repeat 1 36 chr3 1018808 1018883 (TTC)n Simple_repeat 1 76 chr3 1024356 1024419 A-rich Low_complexity 1 64 chr3 1026201 1026241 (GATGAG)n Simple_repeat 1 44 chr3 1026458 1026501 GA-rich Low_complexity 1 48 chr3 1028488 1028506 (TGC)n Simple_repeat 1 19 chr3 1029302 1029334 (TTGGA)n Simple_repeat 1 36 chr3 1030937 1030998 (TTATTTT)n Simple_repeat 1 59 chr3 1030972 1031005 (TTTCTC)n Simple_repeat 1 35 chr3 1034596 1034662 (TTTCA)n Simple_repeat 1 66 chr3 1042961 1042998 (GCTGTT)n Simple_repeat 1 37 chr3 1043622 1043648 (T)n Simple_repeat 1 27 chr3 1044617 1044659 (TATA)n Simple_repeat 1 43 chr3 1045414 1045449 (AAAATATG)n Simple_repeat 1 36 chr3 1048846 1048905 (ATTTTT)n Simple_repeat 1 59 chr3 1049605 1049641 (TCATCT)n Simple_repeat 1 37 chr3 1051874 1051892 (T)n Simple_repeat 1 19 chr3 1054613 1054636 (T)n Simple_repeat 1 24 chr3 1056434 1056485 (TT)n Simple_repeat 1 52 chr3 1067787 1067832 A-rich Low_complexity 1 46 chr3 1075127 1075163 (TCT)n Simple_repeat 1 36 chr3 1077156 1077200 (TTTTC)n Simple_repeat 1 44 chr3 1078168 1078205 (GAA)n Simple_repeat 1 39 chr3 1079007 1079077 tRNA-Ile-ATT tRNA 0 77 chr3 1088926 1088966 (TCAACAT)n Simple_repeat 1 40 chr3 1089953 1089977 (AAT)n Simple_repeat 1 24 chr3 1092005 1092026 (A)n Simple_repeat 1 22 chr3 1092502 1092537 A-rich Low_complexity 1 37 chr3 1097486 1097522 A-rich Low_complexity 1 37 chr3 1099157 1099214 (TTTCT)n Simple_repeat 1 58 chr3 1099187 1099221 (T)n Simple_repeat 1 35 chr3 1099215 1099222 (ATTTTT)n Simple_repeat 1 66 chr3 1101021 1101057 (TGC)n Simple_repeat 1 37 chr3 1101607 1101669 A-rich Low_complexity 1 62 chr3 1103179 1103234 tRNA-Val-GTA tRNA -15 61 chr3 1109227 1109261 (T)n Simple_repeat 1 35 chr3 1111502 1111520 (GAG)n Simple_repeat 1 19 chr3 1112864 1112890 (T)n Simple_repeat 1 27 chr3 1113731 1113754 (T)n Simple_repeat 1 24 chr3 1114645 1114677 (T)n Simple_repeat 1 33 chr3 1119693 1119720 A-rich Low_complexity 1 28 chr3 1120785 1120872 (TGTGCC)n Simple_repeat 1 88 chr3 1121610 1121670 (GCTCTGC)n Simple_repeat 1 61 chr3 1122945 1122981 (AAAT)n Simple_repeat 1 35 chr3 1123152 1123277 (GAATATGGA)n Simple_repeat 1 126 chr3 1123631 1123675 (TCCGGCGC)n Simple_repeat 1 46 chr3 1126384 1126461 (TTTTCCA)n Simple_repeat 1 82 chr3 1131176 1131313 A-rich Low_complexity 1 128 chr3 1132031 1132112 (ATTAAT)n Simple_repeat 1 82 chr3 1132989 1133047 (TGATCATCT)n Simple_repeat 1 59 chr3 1134786 1134810 (A)n Simple_repeat 1 25 chr3 1134877 1134921 (T)n Simple_repeat 1 45 chr3 1135016 1135039 (AGAA)n Simple_repeat 1 26 chr3 1135544 1135604 (ATTGTTC)n Simple_repeat 1 58 chr3 1139495 1139520 (AATAT)n Simple_repeat 1 26 chr3 1139555 1139573 (T)n Simple_repeat 1 19 chr3 1144372 1144420 (TTTTA)n Simple_repeat 1 48 chr3 1145954 1145999 (AT)n Simple_repeat 1 46 chr3 1146240 1146272 (AATAAA)n Simple_repeat 1 33 chr3 1148396 1148476 (TTGTACTTCT)n Simple_repeat 1 80 chr3 1149507 1149591 A-rich Low_complexity 1 82 chr3 1152067 1152086 (T)n Simple_repeat 1 20 chr3 1163380 1163451 tRNA-Lys-AAG tRNA -4 72 chr3 1169203 1169247 A-rich Low_complexity 1 45 chr3 1172919 1172950 A-rich Low_complexity 1 32 chr3 1176441 1176462 (T)n Simple_repeat 1 22 chr3 1180940 1180982 (CAT)n Simple_repeat 1 43 chr3 1186563 1186700 A-rich Low_complexity 1 133 chr3 1187110 1187132 (T)n Simple_repeat 1 23 chr3 1196113 1196129 (T)n Simple_repeat 1 17 chr3 1198516 1198532 (A)n Simple_repeat 1 17 chr3 1200158 1200199 (GTTGAA)n Simple_repeat 1 39 chr3 1202258 1202297 A-rich Low_complexity 1 40 chr3 1204610 1204638 (T)n Simple_repeat 1 29 chr3 1206625 1206658 (TATGTA)n Simple_repeat 1 36 chr3 1214956 1214997 (ATTTTT)n Simple_repeat 1 42 chr3 1223400 1223430 A-rich Low_complexity 1 33 chr3 1230815 1230841 (GAGAA)n Simple_repeat 1 29 chr3 1231147 1231172 (GAT)n Simple_repeat 1 26 chr3 1252264 1252292 (T)n Simple_repeat 1 29 chr3 1256332 1256370 (CTG)n Simple_repeat 1 40 chr3 1257293 1257314 (A)n Simple_repeat 1 22 chr3 1261635 1261653 (A)n Simple_repeat 1 19 chr3 1266831 1266866 (A)n Simple_repeat 1 36 chr3 1270325 1270373 A-rich Low_complexity 1 50 chr3 1272328 1272400 (ATG)n Simple_repeat 1 73 chr3 1272435 1272583 (GAT)n Simple_repeat 1 149 chr3 1273377 1273411 (CTTTTCG)n Simple_repeat 1 36 chr3 1282683 1282701 (T)n Simple_repeat 1 19 chr3 1284361 1284377 (ATC)n Simple_repeat 1 17 chr3 1287407 1287481 (TTCT)n Simple_repeat 1 75 chr3 1292488 1292517 (TTTCCA)n Simple_repeat 1 29 chr3 1292616 1292644 (ATTTT)n Simple_repeat 1 29 chr3 1296755 1296763 (ATTTTTC)n Simple_repeat 1 46 chr3 1296764 1296806 (TTTCTC)n Simple_repeat 1 45 chr3 1302666 1302713 (TGA)n Simple_repeat 1 48 chr3 1312314 1312354 (TGCT)n Simple_repeat 1 41 chr3 1320028 1320082 (GGACGA)n Simple_repeat 1 55 chr3 1320212 1320253 (GAT)n Simple_repeat 1 42 chr3 1329341 1329402 MamRTE1 LINE/RTE-BovB (2318) 1 494 chr3 1330045 1330111 GA-rich Low_complexity 1 62 chr3 1332034 1332052 (A)n Simple_repeat 1 19 chr3 1333417 1333475 (TAGTA)n Simple_repeat 1 63 chr3 1336136 1336156 (TTC)n Simple_repeat 1 21 chr3 1341189 1341224 (GCTTAT)n Simple_repeat 1 36 chr3 1342499 1342521 (T)n Simple_repeat 1 23 chr3 1342621 1342642 (A)n Simple_repeat 1 22 chr3 1343009 1343046 (TTT)n Simple_repeat 1 38 chr3 1344932 1344988 (T)n Simple_repeat 1 57 chr3 1347046 1347092 (CATCTTT)n Simple_repeat 1 47 chr3 1348841 1348873 (T)n Simple_repeat 1 33 chr3 1351107 1351154 A-rich Low_complexity 1 49 chr3 1351412 1351501 (TTTCAT)n Simple_repeat 1 85 chr3 1351750 1351778 (T)n Simple_repeat 1 29 chr3 1353533 1353560 A-rich Low_complexity 1 28 chr3 1353562 1353579 (TA)n Simple_repeat 1 18 chr3 1362114 1362145 (ATATT)n Simple_repeat 1 32 chr3 1369095 1369130 (CTT)n Simple_repeat 1 36 chr3 1370226 1370271 (TC)n Simple_repeat 1 42 chr3 1378494 1378653 (ATCTC)n Simple_repeat 1 162 chr3 1380096 1380165 Penelope1_Vert LINE/Penelope 96 167 chr3 1382924 1382958 (GAAGTTT)n Simple_repeat 1 36 chr3 1383223 1383248 (T)n Simple_repeat 1 26 chr3 1383619 1383665 (ATTTT)n Simple_repeat 1 45 chr3 1384845 1384898 (AGAAGT)n Simple_repeat 1 91 chr3 1384899 1384947 (AGC)n Simple_repeat 1 49 chr3 1384948 1384960 (AGAAGT)n Simple_repeat 92 116 chr3 1387761 1387854 A-rich Low_complexity 1 90 chr3 1390646 1390696 (A)n Simple_repeat 1 51 chr3 1394323 1394348 (T)n Simple_repeat 1 26 chr3 1398408 1398504 (TGAATC)n Simple_repeat 1 97 chr3 1398823 1398852 (TCTGAA)n Simple_repeat 1 30 chr3 1404351 1404413 (TTAATT)n Simple_repeat 1 65 chr3 1406595 1406630 (AAAAT)n Simple_repeat 1 35 chr3 1407729 1407750 (T)n Simple_repeat 1 22 chr3 1411853 1411887 (TA)n Simple_repeat 1 34 chr3 1413153 1413184 (AACA)n Simple_repeat 1 33 chr3 1414420 1414459 (TA)n Simple_repeat 1 41 chr3 1414542 1414571 (T)n Simple_repeat 1 30 chr3 1415106 1415124 (T)n Simple_repeat 1 19 chr3 1416536 1416562 (TTTC)n Simple_repeat 1 28 chr3 1418098 1418150 A-rich Low_complexity 1 54 chr3 1432091 1432123 (TCA)n Simple_repeat 1 33 chr3 1437460 1437486 (T)n Simple_repeat 1 27 chr3 1438641 1438663 (T)n Simple_repeat 1 23 chr3 1438664 1438679 (TTTTTC)n Simple_repeat 1 39 chr3 1439013 1439073 A-rich Low_complexity 1 67 chr3 1439834 1439984 (TTTTA)n Simple_repeat 1 159 chr3 1444087 1444108 (T)n Simple_repeat 1 22 chr3 1444988 1445051 (CAGGAG)n Simple_repeat 1 64 chr3 1445522 1445545 (GCA)n Simple_repeat 1 25 chr3 1446316 1446361 (CAA)n Simple_repeat 1 46 chr3 1451950 1452006 A-rich Low_complexity 1 58 chr3 1455163 1455231 (CTTTC)n Simple_repeat 1 71 chr3 1455444 1455460 (T)n Simple_repeat 1 17 chr3 1456116 1456147 A-rich Low_complexity 1 32 chr3 1456148 1456226 (ATAA)n Simple_repeat 3 109 chr3 1456444 1456488 (T)n Simple_repeat 1 45 chr3 1458276 1458297 (T)n Simple_repeat 1 22 chr3 1458953 1458984 A-rich Low_complexity 1 32 chr3 1458985 1459063 (ATAA)n Simple_repeat 3 109 chr3 1459281 1459325 (T)n Simple_repeat 1 45 chr3 1464484 1464515 (AATGA)n Simple_repeat 1 32 chr3 1466505 1466598 (TTTCCA)n Simple_repeat 1 94 chr3 1472152 1472198 (ATATTGT)n Simple_repeat 1 47 chr3 1473970 1474078 (ATTTTT)n Simple_repeat 1 115 chr3 1482913 1482983 (TCTTTAGAC)n Simple_repeat 1 71 chr3 1485537 1485587 GA-rich Low_complexity 1 50 chr3 1485685 1485720 GA-rich Low_complexity 1 36 chr3 1490314 1490348 (CTGCGC)n Simple_repeat 1 35 chr3 1491207 1491241 (GGCGCA)n Simple_repeat 1 35 chr3 1491420 1491451 (GGCGCT)n Simple_repeat 1 31 chr3 1492990 1493055 (TGTA)n Simple_repeat 1 66 chr3 1495392 1495448 (TCTTT)n Simple_repeat 1 57 chr3 1502795 1502987 (TTACATC)n Simple_repeat 1 204 chr3 1507605 1507637 A-rich Low_complexity 1 33 chr3 1514688 1514706 (TCCTC)n Simple_repeat 1 41 chr3 1514707 1514744 (CTTCTC)n Simple_repeat 1 37 chr3 1514745 1514754 (TCCTC)n Simple_repeat 42 68 chr3 1518629 1518655 (A)n Simple_repeat 1 27 chr3 1520879 1520950 (TTC)n Simple_repeat 1 71 chr3 1523695 1523788 (TT)n Simple_repeat 1 94 chr3 1525221 1525275 A-rich Low_complexity 1 57 chr3 1531321 1531345 (GAAA)n Simple_repeat 1 26 chr3 1533379 1533398 (A)n Simple_repeat 1 20 chr3 1539696 1539733 A-rich Low_complexity 1 38 chr3 1540868 1540890 (A)n Simple_repeat 1 23 chr3 1542530 1542550 (T)n Simple_repeat 1 21 chr3 1545134 1545191 (ATT)n Simple_repeat 1 57 chr3 1553601 1553623 (GAT)n Simple_repeat 1 22 chr3 1559162 1559200 (ATTC)n Simple_repeat 1 39 chr3 1560578 1560599 (CTT)n Simple_repeat 1 22 chr3 1561639 1561665 (TTC)n Simple_repeat 1 29 chr3 1571431 1571465 A-rich Low_complexity 1 35 chr3 1574501 1574549 (TTTC)n Simple_repeat 1 48 chr3 1575884 1575912 (T)n Simple_repeat 1 29 chr3 1578396 1578418 (T)n Simple_repeat 1 23 chr3 1585149 1585188 A-rich Low_complexity 1 40 chr3 1588899 1588928 (T)n Simple_repeat 1 30 chr3 1590572 1590656 GA-rich Low_complexity 1 85 chr3 1594994 1595022 (AAAAT)n Simple_repeat 1 29 chr3 1596475 1596515 (TTTAT)n Simple_repeat 1 42 chr3 1599989 1600013 (ATTA)n Simple_repeat 1 26 chr3 1603727 1603748 (ATCT)n Simple_repeat 1 22 chr3 1612783 1612808 (AT)n Simple_repeat 1 26 chr3 1622674 1622727 A-rich Low_complexity 1 54 chr3 1623123 1623162 (TTTCCT)n Simple_repeat 1 40 chr3 1624751 1624772 (TTCT)n Simple_repeat 1 22 chr3 1627952 1628024 tRNA-Met-i tRNA -2 73 chr3 1634963 1634985 (T)n Simple_repeat 1 23 chr3 1635849 1635928 GA-rich Low_complexity 1 80 chr3 1644545 1644615 UCON80_AMi Unknown -90 132 chr3 1646821 1646852 (ATCATC)n Simple_repeat 1 32 chr3 1660275 1660333 MamSINE1 SINE/tRNA-RTE -201 89 chr3 1673637 1673658 (CAT)n Simple_repeat 1 22 chr3 1681790 1681806 (T)n Simple_repeat 1 17 chr3 1702843 1702866 (TA)n Simple_repeat 1 24 chr3 1711532 1711564 GA-rich Low_complexity 1 33 chr3 1713555 1713589 (GAT)n Simple_repeat 1 35 chr3 1714490 1714580 (TATT)n Simple_repeat 1 86 chr3 1715228 1715251 (TATC)n Simple_repeat 1 25 chr3 1718838 1718886 (AAGTA)n Simple_repeat 1 51 chr3 1719388 1719462 tRNA-Met tRNA 1 74 chr3 1732627 1732686 A-rich Low_complexity 1 61 chr3 1735394 1735432 X7B_LINE LINE/CR1 -1 249 chr3 1737188 1737219 (ATAGC)n Simple_repeat 1 33 chr3 1739456 1739479 (T)n Simple_repeat 1 24 chr3 1748465 1748486 (A)n Simple_repeat 1 22 chr3 1749486 1749514 (ATTTT)n Simple_repeat 1 30 chr3 1753467 1753501 A-rich Low_complexity 1 35 chr3 1756158 1756202 A-rich Low_complexity 1 45 chr3 1759498 1759545 (ATAATG)n Simple_repeat 1 49 chr3 1762882 1762903 (A)n Simple_repeat 1 22 chr3 1764841 1764865 (ACA)n Simple_repeat 1 25 chr3 1769085 1769127 (AGCGAT)n Simple_repeat 1 43 chr3 1770814 1770860 (TATTGT)n Simple_repeat 1 45 chr3 1775300 1775318 (ACC)n Simple_repeat 1 19 chr3 1777689 1777708 (TTC)n Simple_repeat 1 20 chr3 1782929 1782951 (A)n Simple_repeat 1 23 chr3 1783304 1783340 (AT)n Simple_repeat 1 37 chr3 1785115 1785167 (T)n Simple_repeat 1 53 chr3 1787177 1787219 (TATTTA)n Simple_repeat 1 43 chr3 1789913 1789955 (AAT)n Simple_repeat 1 43 chr3 1790536 1790559 (T)n Simple_repeat 1 24 chr3 1794121 1794264 (CAACAA)n Simple_repeat 1 144 chr3 1805044 1805068 (T)n Simple_repeat 1 25 chr3 1807186 1807233 (AAGATAG)n Simple_repeat 1 48 chr3 1807517 1807558 (CTC)n Simple_repeat 1 42 chr3 1808962 1809011 (AGTAA)n Simple_repeat 1 51 chr3 1812363 1812418 (TTTAT)n Simple_repeat 1 55 chr3 1815193 1815230 (AAGAATA)n Simple_repeat 1 37 chr3 1822264 1822314 (TCATCT)n Simple_repeat 1 51 chr3 1822719 1822750 (A)n Simple_repeat 1 32 chr3 1823031 1823048 (A)n Simple_repeat 1 18 chr3 1823181 1823197 (A)n Simple_repeat 1 17 chr3 1823847 1823921 (AAT)n Simple_repeat 1 73 chr3 1829021 1829085 (ATAA)n Simple_repeat 1 61 chr3 1831341 1831376 (TAACTT)n Simple_repeat 1 35 chr3 1831643 1831677 (TTTTTAC)n Simple_repeat 1 37 chr3 1845348 1845391 (TCAAGTTGT)n Simple_repeat 1 44 chr3 1846595 1846641 (TTG)n Simple_repeat 1 47 chr3 1850302 1850327 (GAT)n Simple_repeat 1 26 chr3 1850616 1850650 (TGATAA)n Simple_repeat 1 37 chr3 1855542 1855560 (ATG)n Simple_repeat 1 19 chr3 1855562 1855596 (AACGAT)n Simple_repeat 1 35 chr3 1858552 1858622 (TT)n Simple_repeat 1 71 chr3 1859756 1859785 (TGTTT)n Simple_repeat 1 30 chr3 1865701 1865761 (TAC)n Simple_repeat 1 61 chr3 1866394 1866461 (CTGTTT)n Simple_repeat 1 68 chr3 1872907 1872956 (ATT)n Simple_repeat 1 53 chr3 1876147 1876214 tRNA-Arg-CGA tRNA -6 70 chr3 1925310 1925336 (TGA)n Simple_repeat 1 27 chr3 1929896 1929975 A-rich Low_complexity 1 77 chr3 1931245 1931295 GA-rich Low_complexity 1 51 chr3 1943468 1943548 (GAGGAT)n Simple_repeat 1 80 chr3 1945684 1945740 GA-rich Low_complexity 1 58 chr3 1947537 1947570 (T)n Simple_repeat 1 34 chr3 1950299 1950328 (CAA)n Simple_repeat 1 30 chr3 1960173 1960218 A-rich Low_complexity 1 42 chr3 1961430 1961454 (A)n Simple_repeat 1 25 chr3 1965399 1965415 (AAG)n Simple_repeat 1 17 chr3 1966188 1966210 (A)n Simple_repeat 1 23 chr3 1968251 1968279 A-rich Low_complexity 1 29 chr3 1969507 1969591 A-rich Low_complexity 1 80 chr3 1976159 1976186 (A)n Simple_repeat 1 28 chr3 1977226 1977277 GA-rich Low_complexity 1 55 chr3 1981313 1981341 (A)n Simple_repeat 1 29 chr3 1985733 1985756 (TA)n Simple_repeat 1 24 chr3 1994094 1994122 (ACA)n Simple_repeat 1 66 chr3 1994123 1994159 (AGCAAC)n Simple_repeat 1 37 chr3 2003418 2003467 GA-rich Low_complexity 1 50 chr3 2007950 2008010 A-rich Low_complexity 1 64 chr3 2011703 2011729 (T)n Simple_repeat 1 27 chr3 2018758 2018833 (GCT)n Simple_repeat 1 76 chr3 2020272 2020322 (TTTTAT)n Simple_repeat 1 51 chr3 2020664 2020703 (TTC)n Simple_repeat 1 40 chr3 2027466 2027493 (TA)n Simple_repeat 1 29 chr3 2029759 2029794 (TTTGTAT)n Simple_repeat 1 36 chr3 2033698 2033762 tRNA-Pro-CCA tRNA 8 72 chr3 2038284 2038310 (TATA)n Simple_repeat 1 27 chr3 2042243 2042278 (TATATTT)n Simple_repeat 1 37 chr3 2044298 2044324 (T)n Simple_repeat 1 27 chr3 2045489 2045525 (AT)n Simple_repeat 1 37 chr3 2045590 2045648 (TTT)n Simple_repeat 1 59 chr3 2051880 2051901 (TA)n Simple_repeat 1 22 chr3 2056675 2056713 (CTATTTT)n Simple_repeat 1 40 chr3 2068876 2068919 (TTTTGAT)n Simple_repeat 1 47 chr3 2081504 2081611 (GAT)n Simple_repeat 1 108 chr3 2082754 2082827 (TGA)n Simple_repeat 1 74 chr3 2084629 2084668 (TGTTT)n Simple_repeat 1 40 chr3 2084824 2084851 (AATG)n Simple_repeat 1 28 chr3 2085938 2085980 A-rich Low_complexity 1 40 chr3 2088254 2088286 (GCA)n Simple_repeat 1 33 chr3 2089268 2089299 (A)n Simple_repeat 1 32 chr3 2097243 2097293 A-rich Low_complexity 1 52 chr3 2103753 2103803 (TGCTAA)n Simple_repeat 1 51 chr3 2104274 2104306 (TTC)n Simple_repeat 1 34 chr3 2106551 2106579 (T)n Simple_repeat 1 29 chr3 2107207 2107247 (ATACTAA)n Simple_repeat 1 42 chr3 2115787 2115857 (TTCTC)n Simple_repeat 1 72 chr3 2117406 2117433 (T)n Simple_repeat 1 28 chr3 2117602 2117638 (AAT)n Simple_repeat 1 38 chr3 2120047 2120094 (ATC)n Simple_repeat 1 48 chr3 2139230 2139255 (AAT)n Simple_repeat 1 26 chr3 2141955 2141983 GA-rich Low_complexity 1 28 chr3 2143889 2143909 (T)n Simple_repeat 1 21 chr3 2144724 2144779 A-rich Low_complexity 1 56 chr3 2149475 2149512 (TCTTATT)n Simple_repeat 1 36 chr3 2165264 2165313 (GCA)n Simple_repeat 1 50 chr3 2167132 2167161 (AT)n Simple_repeat 1 31 chr3 2173801 2173872 tRNA-Lys-AAG tRNA -4 72 chr3 2177935 2177968 (TTTTAT)n Simple_repeat 1 61 chr3 2177969 2177997 (ATT)n Simple_repeat 1 30 chr3 2181684 2181721 (ATCAATT)n Simple_repeat 1 39 chr3 2189345 2189372 (AT)n Simple_repeat 1 28 chr3 2193385 2193409 (A)n Simple_repeat 1 25 chr3 2196714 2196773 L3 LINE/CR1 2145 2 203 ( chr3 2197620 2197684 A-rich Low_complexity 1 68 chr3 2215060 2215087 A-rich Low_complexity 1 28 chr3 2218497 2218535 (T)n Simple_repeat 1 39 chr3 2220561 2220601 (TATAT)n Simple_repeat 1 40 chr3 2222611 2222664 GA-rich Low_complexity 1 52 chr3 2228877 2228924 (TATTTT)n Simple_repeat 1 47 chr3 2236961 2236983 (TGA)n Simple_repeat 1 23 chr3 2245234 2245314 A-rich Low_complexity 1 78 chr3 2251984 2252042 A-rich Low_complexity 1 58 chr3 2265409 2265436 (TATT)n Simple_repeat 1 29 chr3 2269042 2269066 (T)n Simple_repeat 1 25 chr3 2274627 2274678 (TT)n Simple_repeat 1 52 chr3 2280125 2280148 (AT)n Simple_repeat 1 24 chr3 2284557 2284614 (AACGCA)n Simple_repeat 1 58 chr3 2286548 2286612 (TTTCTT)n Simple_repeat 1 62 chr3 2292675 2292733 (TTT)n Simple_repeat 1 59 chr3 2302144 2302186 (T)n Simple_repeat 1 43 chr3 2302187 2302194 (TTATTT)n Simple_repeat 1 50 chr3 2303686 2303732 A-rich Low_complexity 1 45 chr3 2308346 2308373 (TTCCT)n Simple_repeat 1 30 chr3 2308561 2308587 (A)n Simple_repeat 1 27 chr3 2312407 2312446 (AAAAAT)n Simple_repeat 1 41 chr3 2322202 2322239 (TATTTTG)n Simple_repeat 1 36 chr3 2324810 2324843 (TCT)n Simple_repeat 1 35 chr3 2327630 2327681 A-rich Low_complexity 1 52 chr3 2328991 2329018 (AATAA)n Simple_repeat 1 29 chr3 2329214 2329231 (TAC)n Simple_repeat 1 18 chr3 2346959 2346999 (TGCTGG)n Simple_repeat 1 41 chr3 2347409 2347440 (TGATTC)n Simple_repeat 1 32 chr3 2348735 2348760 (A)n Simple_repeat 1 26 chr3 2349541 2349557 (A)n Simple_repeat 1 17 chr3 2350539 2350573 (TTCTCA)n Simple_repeat 1 35 chr3 2353416 2353442 (CAT)n Simple_repeat 1 27 chr3 2354470 2354517 (ATG)n Simple_repeat 1 48 chr3 2354518 2354549 (TTC)n Simple_repeat 1 32 chr3 2355451 2355474 (A)n Simple_repeat 1 24 chr3 2361092 2361158 (TTG)n Simple_repeat 1 67 chr3 2361229 2361284 (TGCTGT)n Simple_repeat 1 53 chr3 2371383 2371400 (T)n Simple_repeat 1 18 chr3 2382931 2382965 (ATT)n Simple_repeat 1 35 chr3 2383322 2383388 A-rich Low_complexity 1 63 chr3 2384114 2384158 A-rich Low_complexity 1 46 chr3 2401890 2401906 (A)n Simple_repeat 1 17 chr3 2402454 2402492 A-rich Low_complexity 1 41 chr3 2403665 2403683 (A)n Simple_repeat 1 19 chr3 2406517 2406533 (A)n Simple_repeat 1 17 chr3 2409373 2409414 (T)n Simple_repeat 1 42 chr3 2417930 2418009 tRNA-Leu-TTA tRNA 4 79 chr3 2425692 2425728 (TACAT)n Simple_repeat 1 37 chr3 2427357 2427385 (T)n Simple_repeat 1 29 chr3 2430060 2430084 (AAG)n Simple_repeat 1 25 chr3 2441147 2441179 A-rich Low_complexity 1 33 chr3 2460792 2460836 (ATTCAT)n Simple_repeat 1 46 chr3 2466881 2466910 (T)n Simple_repeat 1 30 chr3 2468703 2468738 A-rich Low_complexity 1 34 chr3 2469291 2469308 (TA)n Simple_repeat 1 18 chr3 2469672 2469693 (T)n Simple_repeat 1 22 chr3 2473496 2473525 (A)n Simple_repeat 1 30 chr3 2477245 2477283 (TTTAGT)n Simple_repeat 1 39 chr3 2487281 2487314 (ATA)n Simple_repeat 1 36 chr3 2490998 2491026 (T)n Simple_repeat 1 29 chr3 2493198 2493229 (TATA)n Simple_repeat 1 32 chr3 2498262 2498298 A-rich Low_complexity 1 37 chr3 2499166 2499186 (T)n Simple_repeat 1 21 chr3 2502211 2502239 (GCCTGA)n Simple_repeat 1 29 chr3 2503696 2503719 (A)n Simple_repeat 1 24 chr3 2504592 2504637 (T)n Simple_repeat 1 46 chr3 2512102 2512167 (TGAGGA)n Simple_repeat 1 66 chr3 2514623 2514654 (ATTATT)n Simple_repeat 1 33 chr3 2514947 2514970 (AT)n Simple_repeat 1 24 chr3 2517566 2517592 (TGT)n Simple_repeat 1 27 chr3 2517613 2517669 (CTGAGG)n Simple_repeat 1 57 chr3 2517747 2517789 (ACTGAG)n Simple_repeat 1 46 chr3 2519525 2519556 (T)n Simple_repeat 1 32 chr3 2520476 2520502 (T)n Simple_repeat 1 27 chr3 2521106 2521159 A-rich Low_complexity 1 56 chr3 2531667 2531690 (T)n Simple_repeat 1 24 chr3 2533191 2533226 (T)n Simple_repeat 1 36 chr3 2536666 2536687 (T)n Simple_repeat 1 22 chr3 2542101 2542266 (TCATCT)n Simple_repeat 1 166 chr3 2542939 2542996 (GAT)n Simple_repeat 1 59 chr3 2543036 2543101 (TCTTCC)n Simple_repeat 1 65 chr3 2550159 2550186 (T)n Simple_repeat 1 28 chr3 2557590 2557629 (TATTT)n Simple_repeat 1 39 chr3 2559687 2559805 (TCA)n Simple_repeat 1 119 chr3 2560303 2560342 AmnSINE1 SINE/5S-Deu-L2 206 245 chr3 2562313 2562369 (CAT)n Simple_repeat 1 57 chr3 2564975 2564993 (T)n Simple_repeat 1 19 chr3 2565957 2565983 (AGC)n Simple_repeat 1 27 chr3 2573072 2573099 (T)n Simple_repeat 1 28 chr3 2581091 2581108 (TA)n Simple_repeat 1 18 chr3 2583273 2583308 A-rich Low_complexity 1 34 chr3 2593471 2593537 tRNA-Arg-AGA tRNA -10 66 chr3 2594020 2594055 A-rich Low_complexity 1 32 chr3 2606132 2606159 (ATAA)n Simple_repeat 1 27 chr3 2611283 2611326 (AT)n Simple_repeat 1 42 chr3 2612772 2612799 (ATG)n Simple_repeat 1 28 chr3 2613950 2613981 (TA)n Simple_repeat 1 32 chr3 2614549 2614575 (ATTTT)n Simple_repeat 1 28 chr3 2620425 2620474 GA-rich Low_complexity 1 48 chr3 2621029 2621069 A-rich Low_complexity 1 41 chr3 2626618 2626645 (T)n Simple_repeat 1 28 chr3 2637081 2637113 (TCA)n Simple_repeat 1 33 chr3 2639009 2639034 (A)n Simple_repeat 1 26 chr3 2643491 2643517 (T)n Simple_repeat 1 27 chr3 2650463 2650495 (T)n Simple_repeat 1 33 chr3 2655779 2655837 (TATTTCT)n Simple_repeat 1 58 chr3 2659643 2659671 (TAAAA)n Simple_repeat 1 30 chr3 2662108 2662184 (GAT)n Simple_repeat 1 77 chr3 2666988 2667042 (AAAAAAT)n Simple_repeat 1 55 chr3 2674901 2674930 (ATAC)n Simple_repeat 1 30 chr3 2675215 2675238 (TCTT)n Simple_repeat 1 24 chr3 2676040 2676082 (GATGATGGT)n Simple_repeat 1 43 chr3 2676650 2676689 A-rich Low_complexity 1 41 chr3 2680506 2680551 A-rich Low_complexity 1 45 chr3 2684896 2684940 (TGA)n Simple_repeat 1 45 chr3 2687387 2687421 (A)n Simple_repeat 1 35 chr3 2687727 2687769 (TCTTTCG)n Simple_repeat 1 44 chr3 2688510 2688563 (TT)n Simple_repeat 1 54 chr3 2690660 2690699 (CTT)n Simple_repeat 1 40 chr3 2693029 2693079 (TCA)n Simple_repeat 1 51 chr3 2694600 2694624 (TTCTTAA)n Simple_repeat 1 42 chr3 2694625 2694660 (TTTAAT)n Simple_repeat 1 34 chr3 2694661 2694677 (TTCTTAA)n Simple_repeat 43 75 chr3 2702461 2702548 A-rich Low_complexity 1 87 chr3 2704403 2704437 A-rich Low_complexity 1 35 chr3 2707498 2707532 (ATTAT)n Simple_repeat 1 33 chr3 2712638 2712667 (TTGT)n Simple_repeat 1 30 chr3 2713085 2713140 (CTT)n Simple_repeat 1 54 chr3 2713360 2713394 (TCATTC)n Simple_repeat 1 35 chr3 2717843 2717863 (T)n Simple_repeat 1 21 chr3 2722093 2722114 (A)n Simple_repeat 1 22 chr3 2725080 2725127 (CATCAC)n Simple_repeat 1 48 chr3 2731330 2731349 (A)n Simple_repeat 1 20 chr3 2738817 2738850 (TCTTGA)n Simple_repeat 1 32 chr3 2745192 2745224 (T)n Simple_repeat 1 33 chr3 2746341 2746377 GA-rich Low_complexity 1 34 chr3 2747082 2747113 G-rich Low_complexity 1 32 chr3 2747981 2748013 (TGACCC)n Simple_repeat 1 33 chr3 2748872 2748894 (A)n Simple_repeat 1 23 chr3 2750096 2750128 (TGA)n Simple_repeat 1 33 chr3 2751845 2751892 (T)n Simple_repeat 1 48 chr3 2759388 2759459 MamRTE1 LINE/RTE-BovB (75) 3 737 chr3 2763919 2763938 (A)n Simple_repeat 1 20 chr3 2766966 2766990 (AAG)n Simple_repeat 1 25 chr3 2774950 2774979 A-rich Low_complexity 1 30 chr3 2781619 2781643 (AAATAT)n Simple_repeat 1 25 chr3 2782137 2782190 (TTTC)n Simple_repeat 1 52 chr3 2789259 2789289 (T)n Simple_repeat 1 31 chr3 2794883 2794918 (T)n Simple_repeat 1 36 chr3 2796275 2796310 (TTTTA)n Simple_repeat 1 32 chr3 2799392 2799412 (T)n Simple_repeat 1 21 chr3 2807656 2807706 A-rich Low_complexity 1 50 chr3 2810049 2810080 (T)n Simple_repeat 1 32 chr3 2812187 2812238 AmnL2-1 LINE/L2 5 57 ( chr3 2826505 2826555 A-rich Low_complexity 1 50 chr3 2828899 2828928 (T)n Simple_repeat 1 30 chr3 2831034 2831085 AmnL2-1 LINE/L2 5 57 ( chr3 2845854 2845916 GA-rich Low_complexity 1 63 chr3 2847991 2848066 (ATGATG)n Simple_repeat 1 76 chr3 2851160 2851181 (CAT)n Simple_repeat 1 22 chr3 2855904 2855948 (TCTACTT)n Simple_repeat 1 46 chr3 2856169 2856198 (AT)n Simple_repeat 1 31 chr3 2859585 2859644 GA-rich Low_complexity 1 60 chr3 2863663 2863728 A-rich Low_complexity 1 66 chr3 2868332 2868386 (TTGCAT)n Simple_repeat 1 64 chr3 2868516 2868546 (CTGCTC)n Simple_repeat 1 31 chr3 2869302 2869364 (CTGTGC)n Simple_repeat 1 63 chr3 2869387 2869430 (TGTGCC)n Simple_repeat 1 44 chr3 2869825 2869861 (TGC)n Simple_repeat 1 37 chr3 2870052 2870173 (CAATT)n Simple_repeat 1 124 chr3 2870342 2870376 A-rich Low_complexity 1 35 chr3 2871234 2871282 A-rich Low_complexity 1 49 chr3 2872678 2872707 (AAAT)n Simple_repeat 1 31 chr3 2872717 2872736 (T)n Simple_repeat 1 20 chr3 2874877 2874900 (T)n Simple_repeat 1 24 chr3 2875803 2875845 A-rich Low_complexity 1 43 chr3 2876269 2876307 GA-rich Low_complexity 1 39 chr3 2877541 2877567 (CTTTT)n Simple_repeat 1 27 chr3 2880702 2880729 (T)n Simple_repeat 1 28 chr3 2884659 2884727 (AATATGGTCA)n Simple_repeat 1 72 chr3 2887960 2888010 (CTT)n Simple_repeat 1 48 chr3 2893098 2893128 (TTAT)n Simple_repeat 1 31 chr3 2893212 2893250 (T)n Simple_repeat 1 39 chr3 2895048 2895086 A-rich Low_complexity 1 39 chr3 2899324 2899395 L2 LINE/L2 (350) 3 69 chr3 2904026 2904049 (TTTG)n Simple_repeat 1 23 chr3 2904144 2904227 A-rich Low_complexity 1 84 chr3 2908158 2908216 (AGGATA)n Simple_repeat 1 70 chr3 2912954 2912981 A-rich Low_complexity 1 28 chr3 2913025 2913059 (TTTCTA)n Simple_repeat 1 37 chr3 2916920 2916973 (GTGGCG)n Simple_repeat 1 56 chr3 2919259 2919329 (CTTTATG)n Simple_repeat 1 67 chr3 2919520 2919567 (TTGATT)n Simple_repeat 1 49 chr3 2920373 2920434 (ACTTTCC)n Simple_repeat 1 67 chr3 2922252 2922285 (TTTG)n Simple_repeat 1 35 chr3 2922707 2922726 (T)n Simple_repeat 1 20 chr3 2928329 2928377 A-rich Low_complexity 1 49 chr3 2934107 2934136 (AATAA)n Simple_repeat 1 30 chr3 2934288 2934304 (A)n Simple_repeat 1 17 chr3 2939273 2939315 (TCT)n Simple_repeat 1 44 chr3 2940181 2940225 (ATT)n Simple_repeat 1 44 chr3 2940433 2940478 (TTGT)n Simple_repeat 1 45 chr3 2944197 2944231 (CTG)n Simple_repeat 1 34 chr3 2947885 2947921 (AGAATG)n Simple_repeat 1 37 chr3 2956796 2956830 (TCTTT)n Simple_repeat 1 34 chr3 2957618 2957648 A-rich Low_complexity 1 31 chr3 2959312 2959355 (AATA)n Simple_repeat 1 46 chr3 2965268 2965288 (AT)n Simple_repeat 1 21 chr3 2966783 2966825 (GAT)n Simple_repeat 1 42 chr3 2970929 2970950 (CTTT)n Simple_repeat 1 23 chr3 2971193 2971260 tRNA-Arg-CGA_ tRNA -6 70 chr3 2973051 2973094 (AT)n Simple_repeat 1 46 chr3 2978325 2978345 A-rich Low_complexity 1 59 chr3 2978346 2978386 (CATGAA)n Simple_repeat 1 42 chr3 2982708 2982757 A-rich Low_complexity 1 50 chr3 2984695 2984796 (GCAACA)n Simple_repeat 1 99 chr3 2986391 2986433 (ATTTA)n Simple_repeat 1 43 chr3 2990950 2990978 GA-rich Low_complexity 1 29 chr3 2995022 2995040 (T)n Simple_repeat 1 19 chr3 2998353 2998406 (TATTT)n Simple_repeat 1 53 chr3 2999513 2999541 (T)n Simple_repeat 1 29 chr3 3000408 3000463 A-rich Low_complexity 1 53 chr3 3005938 3005978 (A)n Simple_repeat 1 41 chr3 3012501 3012554 (TTAATT)n Simple_repeat 1 50 chr3 3014324 3014409 (AAGAAAATC)n Simple_repeat 1 86 chr3 3016214 3016249 (TATAC)n Simple_repeat 1 36 chr3 3018256 3018293 (ATGCTGTAA)n Simple_repeat 1 38 chr3 3018493 3018548 (CACTTCA)n Simple_repeat 1 53 chr3 3020503 3020529 (TGTCGT)n Simple_repeat 1 27 chr3 3020532 3020563 (CTG)n Simple_repeat 1 32 chr3 3023980 3024020 (TTCAGTTCT)n Simple_repeat 1 43 chr3 3026061 3026084 (A)n Simple_repeat 1 24 chr3 3026880 3026923 A-rich Low_complexity 1 44 chr3 3030626 3030663 (TGATGTA)n Simple_repeat 1 42 chr3 3035385 3035405 (A)n Simple_repeat 1 21 chr3 3036679 3036724 GA-rich Low_complexity 1 47 chr3 3040078 3040195 (CTACTTA)n Simple_repeat 1 114 chr3 3041634 3041673 (ATAAGC)n Simple_repeat 1 43 chr3 3041877 3041930 GA-rich Low_complexity 1 54 chr3 3042071 3042105 (TTTTC)n Simple_repeat 1 35 chr3 3042444 3042621 (ACATT)n Simple_repeat 1 191 chr3 3049368 3049390 (T)n Simple_repeat 1 23 chr3 3051585 3051626 (TAACTTATG)n Simple_repeat 1 42 chr3 3052805 3052833 (T)n Simple_repeat 1 29 chr3 3059657 3059699 (TAA)n Simple_repeat 1 43 chr3 3063970 3064043 (AGAT)n Simple_repeat 1 69 chr3 3065709 3065756 (TTGAC)n Simple_repeat 1 49 chr3 3068125 3068164 (TCATCC)n Simple_repeat 1 43 chr3 3071974 3072032 (CACTCT)n Simple_repeat 1 57 chr3 3072643 3072709 (ACATACAAT)n Simple_repeat 1 67 chr3 3072711 3072788 (ATACTTCA)n Simple_repeat 1 76 chr3 3074908 3074937 (ATAC)n Simple_repeat 1 28 chr3 3076779 3076805 (T)n Simple_repeat 1 27 chr3 3076809 3076858 L2-2_Mam LINE/L2 186 234 chr3 3079291 3079376 MamRTE1 LINE/RTE-BovB (1189) 2 623 chr3 3082444 3082502 A-rich Low_complexity 1 61 chr3 3085527 3085598 A-rich Low_complexity 1 70 chr3 3087733 3087802 GA-rich Low_complexity 1 65 chr3 3088559 3088591 (T)n Simple_repeat 1 33 chr3 3088991 3089025 (TTTA)n Simple_repeat 1 35 chr3 3089339 3089358 (T)n Simple_repeat 1 20 chr3 3095422 3095451 (A)n Simple_repeat 1 30 chr3 3099294 3099332 A-rich Low_complexity 1 39 chr3 3102836 3103007 (ATGAGA)n Simple_repeat 1 171 chr3 3105356 3105404 (ATGCAAC)n Simple_repeat 1 49 chr3 3106588 3106605 (T)n Simple_repeat 1 18 chr3 3108089 3108127 (GGCGCT)n Simple_repeat 1 39 chr3 3108232 3108286 (CAG)n Simple_repeat 1 57 chr3 3111181 3111234 (TT)n Simple_repeat 1 54 chr3 3111902 3111930 (AGATGAA)n Simple_repeat 1 29 chr3 3112738 3112821 (TTGAAT)n Simple_repeat 1 84 chr3 3112913 3112957 (TGAACT)n Simple_repeat 1 45 chr3 3114359 3114406 (TCTCCG)n Simple_repeat 1 45 chr3 3114876 3114973 (TTTTA)n Simple_repeat 1 97 chr3 3116143 3116329 (CATA)n Simple_repeat 1 203 chr3 3116405 3116486 GA-rich Low_complexity 1 87 chr3 3117862 3117930 L3 LINE/CR1 1678 1 750 ( chr3 3118020 3118057 (ATATTGT)n Simple_repeat 1 39 chr3 3119677 3119720 (GCGCCT)n Simple_repeat 1 46 chr3 3122682 3122717 (TGT)n Simple_repeat 1 36 chr3 3122718 3122967 (TGTGCTTGC)n Simple_repeat 1 249 chr3 3122968 3122977 (TGT)n Simple_repeat 1 10 chr3 3122976 3123065 (TGCGCC)n Simple_repeat 1 87 chr3 3123655 3123691 (TTGCTT)n Simple_repeat 1 34 chr3 3124014 3124068 A-rich Low_complexity 1 55 chr3 3124117 3124210 A-rich Low_complexity 1 88 chr3 3131254 3131317 (CGCCAG)n Simple_repeat 1 63 chr3 3132125 3132151 (CTC)n Simple_repeat 1 27 chr3 3133911 3133956 (CATA)n Simple_repeat 1 46 chr3 3136765 3136792 (T)n Simple_repeat 1 28 chr3 3139071 3139122 (TTCTC)n Simple_repeat 1 54 chr3 3139972 3140007 (TTCATT)n Simple_repeat 1 37 chr3 3141972 3142001 (A)n Simple_repeat 1 30 chr3 3142707 3142727 (T)n Simple_repeat 1 21 chr3 3143701 3143762 (GATGAA)n Simple_repeat 1 62 chr3 3144783 3144851 (GGATGA)n Simple_repeat 1 69 chr3 3145348 3145370 (GAT)n Simple_repeat 1 23 chr3 3145434 3145505 (TGACGA)n Simple_repeat 1 72 chr3 3146211 3146240 (TGA)n Simple_repeat 1 30 chr3 3147134 3147169 (TCTCTC)n Simple_repeat 1 36 chr3 3150808 3150842 (ATGA)n Simple_repeat 1 34 chr3 3152028 3152088 GA-rich Low_complexity 1 61 chr3 3152213 3152251 (CAT)n Simple_repeat 1 39 chr3 3155236 3155258 (A)n Simple_repeat 1 23 chr3 3156959 3157004 (CATAACA)n Simple_repeat 1 46 chr3 3168848 3168889 (TTTTAT)n Simple_repeat 1 38 chr3 3172716 3172740 (GACA)n Simple_repeat 1 24 chr3 3173468 3173515 (ATAAATGAA)n Simple_repeat 1 48 chr3 3174346 3174397 (TTTAT)n Simple_repeat 1 55 chr3 3174376 3174403 (TTC)n Simple_repeat 1 28 chr3 3174842 3174847 (TTACTT)n Simple_repeat 1 7 chr3 3174848 3174889 (TTATT)n Simple_repeat 1 42 chr3 3174890 3174984 (TTACTT)n Simple_repeat 8 138 chr3 3175903 3175965 (GCA)n Simple_repeat 1 63 chr3 3176113 3176155 (CACCTCC)n Simple_repeat 1 41 chr3 3177072 3177094 (AAC)n Simple_repeat 1 23 chr3 3177722 3177770 (TTTAT)n Simple_repeat 1 82 chr3 3177771 3177809 (TTCA)n Simple_repeat 1 42 chr3 3177810 3177818 (TTTAT)n Simple_repeat 83 100 chr3 3178635 3178707 (ATAAGG)n Simple_repeat 1 73 chr3 3183760 3183809 G-rich Low_complexity 1 58 chr3 3188558 3188590 (TTTTA)n Simple_repeat 1 34 chr3 3193329 3193361 (TTTTA)n Simple_repeat 1 34 chr3 3196039 3196091 A-rich Low_complexity 1 53 chr3 3197076 3197112 (TGC)n Simple_repeat 1 39 chr3 3199067 3199105 (TATTTT)n Simple_repeat 1 40 chr3 3199786 3199928 A-rich Low_complexity 1 145 chr3 3200208 3200224 (T)n Simple_repeat 1 17 chr3 3211891 3211962 tRNA-Gln-CAA tRNA -3 72 chr3 3212363 3212419 A-rich Low_complexity 1 54 chr3 3215978 3216008 (T)n Simple_repeat 1 31 chr3 3224114 3224140 (TTCTTTC)n Simple_repeat 1 55 chr3 3224141 3224171 (T)n Simple_repeat 1 31 chr3 3224562 3224620 (TCC)n Simple_repeat 1 58 chr3 3225208 3225224 (TCA)n Simple_repeat 1 17 chr3 3225939 3225967 (AAGCC)n Simple_repeat 1 31 chr3 3228676 3228713 A-rich Low_complexity 1 38 chr3 3235760 3235798 (T)n Simple_repeat 1 39 chr3 3236343 3236354 G-rich Low_complexity 1 47 chr3 3236355 3236391 GA-rich Low_complexity 1 39 chr3 3237786 3237884 (TTCT)n Simple_repeat 1 102 chr3 3237853 3237899 (TTTCATT)n Simple_repeat 1 43 chr3 3238262 3238332 (TACTCTATA)n Simple_repeat 1 65 chr3 3240517 3240565 (GAGGTG)n Simple_repeat 1 51 chr3 3240982 3241097 GA-rich Low_complexity 1 116 chr3 3243617 3243789 (ATTTCTC)n Simple_repeat 1 168 chr3 3243790 3243829 (TTCTCAC)n Simple_repeat 4 46 chr3 3246390 3246423 A-rich Low_complexity 1 34 chr3 3247232 3247295 (TTCTCC)n Simple_repeat 1 64 chr3 3249904 3249953 (ATGTTGAGT)n Simple_repeat 1 50 chr3 3249956 3250063 (TATGTTCG)n Simple_repeat 1 108 chr3 3251314 3251527 A-rich Low_complexity 1 198 chr3 3258238 3258307 (TCTTCTT)n Simple_repeat 1 70 chr3 3260490 3260527 (GCGCCT)n Simple_repeat 1 41 chr3 3262984 3263017 (AGCACA)n Simple_repeat 1 34 chr3 3268798 3268865 A-rich Low_complexity 1 68 chr3 3269034 3269062 (AATA)n Simple_repeat 1 30 chr3 3270089 3270103 (CTCTTT)n Simple_repeat 1 164 chr3 3270104 3270246 (TCTT)n Simple_repeat 1 139 chr3 3271646 3271765 A-rich Low_complexity 1 131 chr3 3273437 3273464 A-rich Low_complexity 1 28 chr3 3275212 3275510 (TATC)n Simple_repeat 1 302 chr3 3279243 3279307 (TCT)n Simple_repeat 1 65 chr3 3280256 3280281 (T)n Simple_repeat 1 26 chr3 3289187 3289258 (CATA)n Simple_repeat 1 73 chr3 3305416 3305476 (TGAAG)n Simple_repeat 1 61 chr3 3312600 3312633 (GAAGGAT)n Simple_repeat 1 38 chr3 3312706 3312833 (TTAA)n Simple_repeat 1 130 chr3 3312805 3312862 A-rich Low_complexity 1 59 chr3 3312877 3312918 A-rich Low_complexity 1 41 chr3 3313708 3313779 (CTG)n Simple_repeat 1 72 chr3 3314657 3314700 (GTTTGC)n Simple_repeat 1 46 chr3 3317147 3317185 (ACCA)n Simple_repeat 1 41 chr3 3317929 3317960 (TCA)n Simple_repeat 1 34 chr3 3318862 3318889 (T)n Simple_repeat 1 28 chr3 3322522 3322554 GA-rich Low_complexity 1 33 chr3 3322566 3322598 (AGAAGG)n Simple_repeat 1 33 chr3 3324783 3324830 (ATACTTAC)n Simple_repeat 1 46 chr3 3325000 3325030 (TCTAT)n Simple_repeat 1 32 chr3 3325910 3325986 GA-rich Low_complexity 1 77 chr3 3328827 3328848 (A)n Simple_repeat 1 22 chr3 3331243 3331301 (AATAA)n Simple_repeat 1 59 chr3 3333826 3333858 (A)n Simple_repeat 1 33 chr3 3335114 3335142 (AATAA)n Simple_repeat 1 28 chr3 3344649 3344689 GA-rich Low_complexity 1 40 chr3 3345711 3345744 (CAA)n Simple_repeat 1 34 chr3 3346865 3346906 A-rich Low_complexity 1 43 chr3 3352544 3352577 (TT)n Simple_repeat 1 34 chr3 3353103 3353160 A-rich Low_complexity 1 58 chr3 3354229 3354287 A-rich Low_complexity 1 60 chr3 3354510 3354723 (TTACTA)n Simple_repeat 1 217 chr3 3358902 3358941 A-rich Low_complexity 1 40 chr3 3358942 3358973 (AAAATAG)n Simple_repeat 1 32 chr3 3367924 3367996 (CTGCGC)n Simple_repeat 1 72 chr3 3368470 3368541 (CTGCTG)n Simple_repeat 1 72 chr3 3369756 3369779 (TTG)n Simple_repeat 1 24 chr3 3374451 3374509 (TTC)n Simple_repeat 1 57 chr3 3375342 3375393 (AAATTATCA)n Simple_repeat 1 52 chr3 3377895 3377925 (AAGGAA)n Simple_repeat 1 31 chr3 3377959 3378011 A-rich Low_complexity 1 50 chr3 3382229 3382265 (TTTTG)n Simple_repeat 1 37 chr3 3382588 3382616 (TCA)n Simple_repeat 1 29 chr3 3388641 3388774 (TGAA)n Simple_repeat 1 121 chr3 3391271 3391317 (TTTGC)n Simple_repeat 1 47 chr3 3395845 3395871 (AATAA)n Simple_repeat 1 27 chr3 3406180 3406208 (TTAT)n Simple_repeat 1 29 chr3 3415074 3415114 (CTCTTTG)n Simple_repeat 1 41 chr3 3416422 3416448 (T)n Simple_repeat 1 27 chr3 3418016 3418065 MER5A DNA/hAT-Charli e 122 168 chr3 3426225 3426265 GA-rich Low_complexity 1 41 chr3 3426779 3426829 A-rich Low_complexity 1 47 chr3 3429289 3429333 A-rich Low_complexity 1 45 chr3 3431859 3431880 (T)n Simple_repeat 1 22 chr3 3447455 3447503 A-rich Low_complexity 1 49 chr3 3474166 3474199 (TCTTTA)n Simple_repeat 1 32 chr3 3474510 3474538 (TTA)n Simple_repeat 1 29 chr3 3476942 3476979 GA-rich Low_complexity 1 39 chr3 3480187 3480206 (A)n Simple_repeat 1 20 chr3 3480346 3480377 (AT)n Simple_repeat 1 34 chr3 3492423 3492440 (A)n Simple_repeat 1 18 chr3 3492987 3493009 (T)n Simple_repeat 1 23 chr3 3496592 3496669 GA-rich Low_complexity 1 72 chr3 3505439 3505495 (TCT)n Simple_repeat 1 59 chr3 3509092 3509130 (TTTTTC)n Simple_repeat 1 77 chr3 3509131 3509170 (T)n Simple_repeat 1 40 chr3 3519922 3519950 A-rich Low_complexity 1 29 chr3 3534457 3534528 (AAGATA)n Simple_repeat 1 69 chr3 3534607 3534631 (T)n Simple_repeat 1 25 chr3 3535022 3535048 (T)n Simple_repeat 1 27 chr3 3542148 3542165 (TTC)n Simple_repeat 1 18 chr3 3545237 3545306 (TACTTCA)n Simple_repeat 1 71 chr3 3547635 3547666 A-rich Low_complexity 1 32 chr3 3547900 3547952 (GATTT)n Simple_repeat 1 49 chr3 3548543 3548588 (CGCATG)n Simple_repeat 1 45 chr3 3550060 3550143 (CGCAGA)n Simple_repeat 1 88 chr3 3551593 3551623 (T)n Simple_repeat 1 31 chr3 3551698 3551759 (TTGTA)n Simple_repeat 1 57 chr3 3552702 3552735 (TCTCAA)n Simple_repeat 1 33 chr3 3554569 3554614 (AAAACAA)n Simple_repeat 1 46 chr3 3558093 3558109 (T)n Simple_repeat 1 17 chr3 3562610 3562647 (CGTTTC)n Simple_repeat 1 38 chr3 3563407 3563449 (TGC)n Simple_repeat 1 43 chr3 3564015 3564032 (T)n Simple_repeat 1 18 chr3 3564058 3564108 (T)n Simple_repeat 1 51 chr3 3566814 3566833 (AAT)n Simple_repeat 1 20 chr3 3567674 3567700 (T)n Simple_repeat 1 27 chr3 3569230 3569261 GA-rich Low_complexity 1 32 chr3 3578636 3578659 (T)n Simple_repeat 1 24 chr3 3580586 3580639 A-rich Low_complexity 1 52 chr3 3581386 3581415 GA-rich Low_complexity 1 30 chr3 3581523 3581603 GA-rich Low_complexity 1 80 chr3 3584606 3584642 A-rich Low_complexity 1 35 chr3 3587079 3587105 (A)n Simple_repeat 1 27 chr3 3588747 3588792 (ATACAT)n Simple_repeat 1 46 chr3 3602088 3602137 MIR3 SINE/MIR -53 155 chr3 3605706 3605746 A-rich Low_complexity 1 38 chr3 3606051 3606091 (AAGAGC)n Simple_repeat 1 40 chr4 17133 17161 (T)n S imple_repeat 1 2 9 chr4 21475 21498 (A)n S imple_repeat 1 2 4 chr4 21581 21605 (T)n S imple_repeat 1 2 5 chr4 27778 27799 (A)n S imple_repeat 1 2 2 chr4 28622 28655 GA-rich L ow_complexity 1 3 4 chr4 36793 36842 L3b L INE/CR1 (298) 493 4 4 chr4 39793 39820 (AATA)n S imple_repeat 1 2 9 chr4 39891 39926 (TATCAGA)n S imple_repeat 1 3 8 chr4 40318 40342 (T)n S imple_repeat 1 2 5 chr4 40695 40714 (T)n S imple_repeat 1 2 0 chr4 45435 45487 GA-rich L ow_complexity 1 5 4 chr4 50537 50558 (T)n S imple_repeat 1 2 2 chr4 57457 57502 (GAGGAT)n S imple_repeat 1 4 6 chr4 58090 58176 (CAG)n S imple_repeat 1 8 6 chr4 61599 61649 (ACACCAT)n S imple_repeat 1 5 1 chr4 66393 66430 (TGCTTA)n S imple_repeat 1 4 1 chr4 66419 66487 (CTTC)n S imple_repeat 1 7 2 chr4 67119 67135 (A)n S imple_repeat 1 1 7 chr4 70153 70176 (T)n S imple_repeat 1 2 4 chr4 72805 72825 (TA)n S imple_repeat 1 2 1 chr4 74326 74347 (A)n S imple_repeat 1 2 2 chr4 74389 74434 A-rich L ow_complexity 1 4 8 chr4 78355 78406 (TTTAT)n S imple_repeat 1 5 4 chr4 85869 85912 A-rich L ow_complexity 1 4 7 chr4 88485 88550 tRNA-Ser-TCA_ t RNA 8 7 3 ( chr4 93019 93038 (T)n S imple_repeat 1 2 0 chr4 93492 93527 (TCTTT)n S imple_repeat 1 3 8 chr4 98230 98263 (TTTATT)n S imple_repeat 1 3 4 chr4 101780 101803 (T)n S imple_repeat 1 2 4 chr4 103489 103521 A-rich L ow_complexity 1 3 3 chr4 105162 105299 (CTG)n S imple_repeat 1 13 8 chr4 118443 118467 (T)n S imple_repeat 1 2 5 chr4 119230 119255 (GAA)n S imple_repeat 1 2 7 chr4 120040 120072 (TGA)n S imple_repeat 1 3 3 chr4 121588 121655 GA-rich L ow_complexity 1 6 9 chr4 122602 122620 (T)n S imple_repeat 1 1 9 chr4 125427 125455 GA-rich L ow_complexity 1 3 3 chr4 134145 134176 (AGA)n S imple_repeat 1 3 2 chr4 136761 136835 GA-rich L ow_complexity 1 7 8 chr4 137095 137180 GA-rich L ow_complexity 1 9 0 chr4 140022 140075 A-rich L ow_complexity 1 5 4 chr4 140835 140897 (ATTTCAT)n S imple_repeat 1 6 5 chr4 140918 140939 (T)n S imple_repeat 1 2 2 chr4 145458 145476 (CTT)n S imple_repeat 1 1 9 chr4 147687 147705 (T)n S imple_repeat 1 1 9 chr4 148081 148124 GA-rich L ow_complexity 1 4 4 chr4 148960 148991 (GAGAAC)n S imple_repeat 1 3 2 chr4 150595 150614 (GAG)n S imple_repeat 1 2 0 chr4 150924 151212 (TAGGTAA)n S imple_repeat 1 29 7 chr4 151316 151367 A-rich L ow_complexity 1 5 4 chr4 152102 152123 (GCA)n S imple_repeat 1 2 2 chr4 154571 154595 (CTC)n S imple_repeat 1 2 5 chr4 155247 155299 (ACTATCATTA)n S imple_repeat 1 5 4 chr4 157776 157942 (CTC)n S imple_repeat 1 16 9 chr4 157837 157929 (CTT)n S imple_repeat 1 9 6 chr4 158910 158950 A-rich L ow_complexity 1 4 1 chr4 160219 160318 (TTTTTAC)n S imple_repeat 1 10 4 chr4 162361 162429 (CCTTCATCA)n S imple_repeat 1 6 9 chr4 164374 164413 (CATCACA)n S imple_repeat 1 4 2 chr4 165233 165277 (ATTAT)n S imple_repeat 1 4 6 chr4 168196 168226 A-rich L ow_complexity 1 3 2 chr4 179081 179120 (GGTGCTGA)n S imple_repeat 1 4 4 chr4 182143 182201 (ATCTTTA)n S imple_repeat 1 5 9 chr4 185399 185437 (CGTTTG)n S imple_repeat 1 3 9 chr4 186655 186701 (T)n S imple_repeat 1 4 7 chr4 186995 187030 (TTCA)n S imple_repeat 1 3 7 chr4 187623 187667 (TTTTAT)n S imple_repeat 1 4 6 chr4 192770 192821 (ATAA)n S imple_repeat 1 5 5 chr4 194424 194476 GA-rich L ow_complexity 1 5 5 chr4 194552 194587 (ACCTCA)n S imple_repeat 1 3 6 chr4 199263 199295 (ATATGT)n S imple_repeat 1 3 3 chr4 199526 199560 (TTTAAC)n S imple_repeat 1 3 6 chr4 201245 201280 (TC)n S imple_repeat 1 3 9 chr4 203254 203289 A-rich L ow_complexity 1 3 6 chr4 204399 204438 (TCTCAAC)n S imple_repeat 1 4 1 chr4 207123 207160 (AAGATA)n S imple_repeat 1 3 8 chr4 209162 209206 (AAT)n S imple_repeat 1 4 5 chr4 209738 209783 (TTATTCA)n S imple_repeat 1 4 6 chr4 220356 220388 (ACAT)n S imple_repeat 1 3 3 chr4 220745 220782 (CACAGC)n S imple_repeat 1 3 9 chr4 226684 226718 GA-rich L ow_complexity 1 3 5 chr4 229180 229203 (A)n S imple_repeat 1 2 4 chr4 230372 230628 (TCT)n S imple_repeat 1 26 9 chr4 237331 237358 (ATAAA)n S imple_repeat 1 2 8 chr4 241084 241105 (AT)n S imple_repeat 1 2 2 chr4 254982 255038 tRNA-Tyr-TAC t RNA 8 6 5 ( chr4 266203 266286 (TTCATT)n S imple_repeat 1 8 7 chr4 266642 266668 (T)n S imple_repeat 1 2 7 chr4 271692 271720 (ATTT)n S imple_repeat 1 2 9 chr4 280879 280926 (TATGGC)n S imple_repeat 1 4 9 chr4 290558 290595 A-rich L ow_complexity 1 3 8 chr4 297287 297350 L3b L INE/CR1 4336 439 7 (8 chr4 306325 306434 X9_LINE L INE/L1 (573) 36 3 chr4 310724 310781 A-rich L ow_complexity 1 6 0 chr4 311335 311380 (TTC)n S imple_repeat 1 5 0 chr4 312648 312683 (TGA)n S imple_repeat 1 3 6 chr4 313480 313516 (TCCTT)n S imple_repeat 1 3 8 chr4 317671 317695 (TA)n S imple_repeat 1 2 6 chr4 331337 331360 (T)n S imple_repeat 1 2 4 chr4 334387 334425 (T)n S imple_repeat 1 3 9 chr4 337666 337692 (TAA)n S imple_repeat 1 2 7 chr4 339524 339588 (TTTC)n S imple_repeat 1 6 9 chr4 342381 342402 (A)n S imple_repeat 1 2 2 chr4 345986 346018 (TCT)n S imple_repeat 1 3 3 chr4 351980 352040 (GCAGGT)n S imple_repeat 1 6 1 chr4 352077 352104 (CTGCTT)n S imple_repeat 1 2 8 chr4 362001 362052 (CTT)n S imple_repeat 1 5 4 chr4 373085 373110 (AT)n S imple_repeat 1 2 7 chr4 388248 388327 (TCT)n S imple_repeat 1 8 1 chr4 388793 388822 (TCA)n S imple_repeat 1 3 0 chr4 394060 394078 (A)n S imple_repeat 1 1 9 chr4 394752 394805 (TCCTCA)n S imple_repeat 1 5 5 chr4 396191 396246 GA-rich L ow_complexity 1 5 6 chr4 396455 396492 (TCAGAA)n S imple_repeat 1 3 8 chr4 396641 396673 (TCAGAC)n S imple_repeat 1 3 3 chr4 397671 397720 A-rich L ow_complexity 1 5 2 chr4 398742 398819 (AAC)n S imple_repeat 1 7 8 chr4 401714 401746 (CTTTG)n S imple_repeat 1 3 4 chr4 403289 403326 A-rich L ow_complexity 1 4 0 chr4 412658 412700 (TACCATA)n S imple_repeat 1 4 5 chr4 414717 414738 (A)n S imple_repeat 1 2 2 chr4 417240 417312 (TTAGATAC)n S imple_repeat 1 8 1 chr4 418479 418532 (AGAAT)n S imple_repeat 1 5 6 chr4 419571 419707 (TTTTGTCA)n S imple_repeat 1 14 6 chr4 423321 423365 (TAATT)n S imple_repeat 1 4 6 chr4 428551 428593 (AT)n S imple_repeat 1 4 7 chr4 431019 431057 GA-rich L ow_complexity 1 3 9 chr4 431921 431981 (TATTT)n S imple_repeat 1 6 7 chr4 436036 436067 (TGGA)n S imple_repeat 1 3 3 chr4 436082 436169 (GTGATTGTG)n S imple_repeat 1 8 8 chr4 438171 438204 (GAT)n S imple_repeat 1 3 6 chr4 438675 438693 (A)n S imple_repeat 1 1 9 chr4 438859 438888 (TATTTT)n S imple_repeat 1 3 1 chr4 443767 443818 (CGA)n S imple_repeat 1 5 4 chr4 445788 445813 (GCGCCT)n S imple_repeat 1 2 6 chr4 474074 474100 (TA)n S imple_repeat 1 2 8 chr4 476726 476770 (AATGC)n S imple_repeat 1 5 0 chr4 484114 484155 (TTC)n S imple_repeat 1 4 3 chr4 490722 490753 (TTTAA)n S imple_repeat 1 3 3 chr4 494911 494962 (CTCATTT)n S imple_repeat 1 5 0 chr4 497699 497737 A-rich L ow_complexity 1 3 9 chr4 509617 509665 (ATAA)n S imple_repeat 1 4 9 chr4 527280 527328 (TCA)n S imple_repeat 1 5 0 chr4 538123 538217 A-rich L ow_complexity 1 9 5 chr4 539602 539643 (AATGATG)n S imple_repeat 1 4 4 chr4 542595 542634 (AAAATA)n S imple_repeat 1 3 7 chr4 543669 543747 (AGTTGC)n S imple_repeat 1 8 0 chr4 553486 553511 (T)n S imple_repeat 1 2 6 chr4 556764 556780 (A)n S imple_repeat 1 1 7 chr4 558236 558257 (TAT)n S imple_repeat 1 2 2 chr4 560125 560153 (T)n S imple_repeat 1 2 9 chr4 566694 566755 (TT)n S imple_repeat 1 6 2 chr4 569495 569567 (TTTC)n S imple_repeat 1 7 5 chr4 569913 569940 (CTT)n S imple_repeat 1 2 8 chr4 574860 574899 (GTTC)n S imple_repeat 1 4 0 chr4 594529 594562 (TAATATT)n S imple_repeat 1 3 6 chr4 596221 596257 (AGTTT)n S imple_repeat 1 3 9 chr4 598802 598862 tRNA-Gly-GGG t RNA (9) 6 5 chr4 600893 600953 tRNA-Gly-GGG t RNA 6 6 5 chr4 606966 606994 (ATC)n S imple_repeat 1 3 2 chr4 608083 608105 (AT)n S imple_repeat 1 2 4 chr4 608264 608308 (AATTA)n S imple_repeat 1 4 2 chr4 608527 608561 (TTTACTT)n S imple_repeat 1 3 7 chr4 612784 612810 (ATAAA)n S imple_repeat 1 2 7 chr4 614288 614311 (A)n S imple_repeat 1 2 4 chr4 615670 615702 (TGA)n S imple_repeat 1 3 3 chr4 619272 619358 (CAG)n S imple_repeat 1 8 7 chr4 622826 622844 (AT)n S imple_repeat 1 1 9 chr4 627045 627085 A-rich L ow_complexity 1 4 1 chr4 645486 645538 (TTA)n S imple_repeat 1 5 4 chr4 655839 655877 (ATTTTAT)n S imple_repeat 1 3 9 chr4 660012 660112 X7C_LINE L INE/CR1 74 17 4 ( chr4 661366 661409 (ATCAAG)n S imple_repeat 1 4 5 chr4 667309 667345 (CTTTA)n S imple_repeat 1 4 0 chr4 669772 669865 (TC)n S imple_repeat 1 10 0 chr4 671891 671952 A-rich L ow_complexity 1 6 2 chr4 675677 675745 GA-rich L ow_complexity 1 7 0 chr4 677293 677323 (TTTTG)n S imple_repeat 1 3 1 chr4 678145 678206 (AGATGA)n S imple_repeat 1 6 5 chr4 687083 687101 (AT)n S imple_repeat 1 1 9 chr4 688504 688569 (TTATA)n S imple_repeat 1 6 7 chr4 688932 688988 A-rich L ow_complexity 1 5 7 chr4 690365 690411 A-rich L ow_complexity 1 4 8 chr4 694047 694072 (A)n S imple_repeat 1 2 6 chr4 694474 694516 A-rich L ow_complexity 1 4 3 chr4 704203 704244 A-rich L ow_complexity 1 4 2 chr4 709706 709741 A-rich L ow_complexity 1 3 6 chr4 731015 731055 (T)n S imple_repeat 1 4 1 chr4 731481 731537 A-rich L ow_complexity 1 5 9 chr4 731483 731526 (A)n S imple_repeat 1 4 4 chr4 732212 732240 (TTG)n S imple_repeat 1 2 9 chr4 732552 732620 (TATTC)n S imple_repeat 1 7 3 chr4 732912 732937 (ATAA)n S imple_repeat 1 2 6 chr4 735638 735693 MamRTE1 L INE/RTE-BovB 2933 298 4 (8 chr4 739570 739606 (T)n S imple_repeat 1 3 7 chr4 743425 743453 (AAT)n S imple_repeat 1 2 9 chr4 746983 747017 (A)n S imple_repeat 1 3 5 chr4 747945 747973 A-rich L ow_complexity 1 2 9 chr4 749570 749605 (AGATGA)n S imple_repeat 1 3 7 chr4 754448 754485 GA-rich L ow_complexity 1 3 8 chr4 759768 759792 (T)n S imple_repeat 1 2 5 chr4 764762 764824 (TTC)n S imple_repeat 1 6 3 chr4 765667 765710 A-rich L ow_complexity 1 4 4 chr4 766408 766462 A-rich L ow_complexity 1 5 7 chr4 772780 772895 A-rich L ow_complexity 1 12 0 chr4 776490 776513 (A)n S imple_repeat 1 2 4 chr4 780599 780653 (ATTTT)n S imple_repeat 1 5 5 chr4 787079 787188 (TCTTCA)n S imple_repeat 1 11 2 chr4 787741 787776 (A)n S imple_repeat 1 3 6 chr4 796650 796686 (GAT)n S imple_repeat 1 3 7 chr4 796687 796722 (ATG)n S imple_repeat 1 3 6 chr4 796723 796764 (GAT)n S imple_repeat 2 4 2 chr4 797044 797074 (ATG)n S imple_repeat 1 3 1 chr4 797112 797149 (GAT)n S imple_repeat 1 3 9 chr4 798604 798627 (ATG)n S imple_repeat 1 2 4 chr4 800359 800414 (ATGACG)n S imple_repeat 1 5 6 chr4 800544 800580 (T)n S imple_repeat 1 3 7 chr4 815846 816034 A-rich L ow_complexity 1 18 9 chr4 816223 816249 A-rich L ow_complexity 1 2 7 chr4 817995 818034 A-rich L ow_complexity 1 4 2 chr4 818210 818248 A-rich L ow_complexity 1 3 9 chr4 818428 818492 A-rich L ow_complexity 1 6 8 chr4 820290 820336 (TTG)n S imple_repeat 1 5 0 chr4 822250 822277 A-rich L ow_complexity 1 2 8 chr4 828119 828150 (TA)n S imple_repeat 1 3 3 chr4 829279 829318 (ATG)n S imple_repeat 1 4 0 chr4 843750 843795 (GGTGAT)n S imple_repeat 1 4 8 chr4 852012 852097 (TTTTTC)n S imple_repeat 1 8 9 chr4 856272 856312 (ATTTT)n S imple_repeat 1 4 2 chr4 857909 857997 A-rich L ow_complexity 1 8 9 chr4 859767 859838 tRNA-Pro-CCA t RNA 1 7 2 chr4 860107 860151 A-rich L ow_complexity 1 4 6 chr4 867715 867786 GA-rich L ow_complexity 1 7 2 chr4 868295 868327 A-rich L ow_complexity 1 3 3 chr4 872430 872446 (AAG)n S imple_repeat 1 1 7 chr4 872622 872672 GA-rich L ow_complexity 1 5 4 chr4 873782 873831 A-rich L ow_complexity 1 5 1 chr4 876406 876427 (A)n S imple_repeat 1 2 2 chr4 878897 878942 (GTTGTT)n S imple_repeat 1 4 6 chr4 879061 879095 (TGT)n S imple_repeat 1 3 5 chr4 881113 881131 (A)n S imple_repeat 1 1 9 chr4 882315 882339 (A)n S imple_repeat 1 2 5 chr4 891193 891257 tRNA-Pro-CCA t RNA (3) 7 2 chr4 894766 894801 (TTCTAAG)n S imple_repeat 1 3 7 chr4 896588 896626 (GAT)n S imple_repeat 1 4 1 chr4 907276 907294 (A)n S imple_repeat 1 1 9 chr4 917159 917183 (AAAT)n S imple_repeat 1 2 5 chr4 926151 926175 (ACAT)n S imple_repeat 1 2 5 chr4 939889 939927 (AATAA)n S imple_repeat 1 3 9 chr4 956782 956815 (TAAAA)n S imple_repeat 1 3 6 chr4 964662 964716 (TGA)n S imple_repeat 1 5 5 chr4 974750 974861 (AAGATG)n S imple_repeat 1 11 3 chr4 975021 975221 GA-rich L ow_complexity 1 20 2 chr4 975301 975335 GA-rich L ow_complexity 1 3 5 chr4 976367 976388 (AGA)n S imple_repeat 1 2 2 chr4 976512 976590 A-rich L ow_complexity 1 8 3 chr4 978472 978498 (A)n S imple_repeat 1 2 7 chr4 982980 983000 (A)n S imple_repeat 1 2 1 chr4 983432 983466 (AAGAAC)n S imple_repeat 1 3 5 chr4 986264 986358 GA-rich L ow_complexity 1 9 9 chr4 987350 987411 (TTTTTA)n S imple_repeat 1 6 2 chr4 987910 987929 (A)n S imple_repeat 1 2 0 chr4 990020 990065 GA-rich L ow_complexity 1 4 8 chr4 997288 997338 A-rich L ow_complexity 1 5 3 chr4 997396 997438 (T)n S imple_repeat 1 4 3 chr4 998264 998285 (A)n S imple_repeat 1 2 2 chr4 999704 999752 (TT)n S imple_repeat 1 4 9 chr4 1000875 1000898 (A)n S imple_repeat 1 2 4 chr4 1105427 1105451 (A)n S imple_repeat 1 2 5 chr4 1115188 1115246 (CCAGAA)n S imple_repeat 1 5 9 chr4 1124738 1124756 (A)n S imple_repeat 1 1 9 chr4 1125657 1125732 (AT)n S imple_repeat 1 8 1 chr4 1125768 1125843 (AT)n S imple_repeat 1 8 1 chr4 1125879 1125954 (AT)n S imple_repeat 1 8 1 chr4 1133579 1133596 (A)n S imple_repeat 1 1 8 chr4 1140303 1140337 (ATGATA)n S imple_repeat 1 3 5 chr4 1140960 1141036 (ATGAGG)n S imple_repeat 1 7 8 chr4 1145065 1145121 GA-rich L ow_complexity 1 5 9 chr4 1146227 1146266 (GGCAACGCG)n S imple_repeat 1 4 0 chr4 1149335 1149398 (TCATCT)n S imple_repeat 1 6 7 chr4 1150124 1150155 (AAAAT)n S imple_repeat 1 3 2 chr4 1150810 1150871 (TCATCA)n S imple_repeat 1 6 3 chr4 1153638 1153654 (T)n S imple_repeat 1 1 7 chr4 1154139 1154168 (T)n S imple_repeat 1 3 0 chr4 1156430 1156448 (T)n S imple_repeat 1 1 9 chr4 1156499 1156515 (A)n S imple_repeat 1 1 7 chr4 1160371 1160417 (GAAAATGTT)n S imple_repeat 1 5 0 chr4 1161307 1161374 A-rich L ow_complexity 1 6 8 chr4 1168267 1168284 (A)n S imple_repeat 1 1 8 chr4 1170005 1170069 (CTT)n S imple_repeat 1 6 6 chr4 1171140 1171208 A-rich L ow_complexity 1 6 9 chr4 1173978 1174009 A-rich L ow_complexity 1 3 2 chr4 1186945 1186996 (TTCAT)n S imple_repeat 1 5 3 chr4 1188030 1188077 A-rich L ow_complexity 1 5 2 chr4 1191540 1191583 (TTGAATG)n S imple_repeat 1 4 6 chr4 1191818 1191836 (A)n S imple_repeat 1 1 9 chr4 1196476 1196500 (A)n S imple_repeat 1 2 5 chr4 1198708 1198740 (AAAT)n S imple_repeat 1 3 3 chr4 1201180 1201196 (T)n S imple_repeat 1 1 7 chr4 1202637 1202658 (TATG)n S imple_repeat 1 2 2 chr4 1206785 1206809 (T)n S imple_repeat 1 2 5 chr4 1208336 1208376 (T)n S imple_repeat 1 4 1 chr4 1210254 1210305 GA-rich L ow_complexity 1 5 3 chr4 1210917 1210952 (GATGTT)n S imple_repeat 1 3 6 chr4 1211115 1211212 (TTATT)n S imple_repeat 1 9 9 chr4 1218045 1218061 (T)n S imple_repeat 1 1 7 chr4 1220582 1220656 (TACTTG)n S imple_repeat 1 7 5 chr4 1226943 1226975 A-rich L ow_complexity 1 3 6 chr4 1230234 1230275 (CTTTACTTA)n S imple_repeat 1 4 6 chr4 1230718 1230754 (TTTC)n S imple_repeat 1 3 7 chr4 1232767 1232813 A-rich L ow_complexity 1 4 7 chr4 1235089 1235141 (CTTTAT)n S imple_repeat 1 5 3 chr4 1235765 1235836 A-rich L ow_complexity 1 7 2 chr4 1242904 1242942 (TGAGAG)n S imple_repeat 1 3 9 chr4 1243107 1243668 (AAGAAGT)n S imple_repeat 1 58 5 chr4 1243675 1243702 (AGT)n S imple_repeat 1 2 8 chr4 1249905 1250020 (ATCTAG)n S imple_repeat 1 12 5 chr4 1252810 1252829 (T)n S imple_repeat 1 2 0 chr4 1253455 1253514 (GGACGA)n S imple_repeat 1 6 3 chr4 1255048 1255116 GA-rich L ow_complexity 1 7 2 chr4 1255118 1255203 (GATGAA)n S imple_repeat 1 9 0 chr4 1262325 1262402 (AAGAATG)n S imple_repeat 1 8 2 chr4 1274902 1274956 (CAGCCG)n S imple_repeat 1 5 9 chr4 1278085 1278120 (TGAAGA)n S imple_repeat 1 3 6 chr4 1278645 1278755 (TTCTA)n S imple_repeat 1 11 4 chr4 1280246 1280377 (TTTGAATA)n S imple_repeat 1 14 4 chr4 1282189 1282225 (T)n S imple_repeat 1 3 7 chr4 1282692 1282761 (ATGA)n S imple_repeat 1 7 0 chr4 1285331 1285366 (TCTA)n S imple_repeat 1 3 7 chr4 1292281 1292317 (TTTCTCA)n S imple_repeat 1 3 7 chr4 1292568 1292623 A-rich L ow_complexity 1 5 6 chr4 1293338 1293368 (CCGACG)n S imple_repeat 1 3 1 chr4 1295002 1295304 L1M5 L INE/L1 (2927) 321 9 2 chr4 1295558 1295583 (T)n S imple_repeat 1 2 6 chr4 1296900 1296942 (TTCCT)n S imple_repeat 1 4 5 chr4 1301798 1301852 (CTTCGT)n S imple_repeat 1 5 5 chr4 1305716 1305740 (TCT)n S imple_repeat 1 2 6 chr4 1306071 1306104 (T)n S imple_repeat 1 3 4 chr4 1311406 1311465 GA-rich L ow_complexity 1 6 1 chr4 1313622 1313644 (T)n S imple_repeat 1 2 3 chr4 1323818 1323936 (GATCAC)n S imple_repeat 1 11 9 chr4 1325627 1325659 (T)n S imple_repeat 1 3 3 chr4 1328835 1328921 (CAG)n S imple_repeat 1 8 8 chr4 1369634 1369708 (AATA)n S imple_repeat 1 7 7 chr4 1369638 1369691 A-rich L ow_complexity 1 5 4 chr4 1370700 1370750 A-rich L ow_complexity 1 5 1 chr4 1378334 1378355 (TAAT)n S imple_repeat 1 2 3 chr4 1389037 1389058 (TA)n S imple_repeat 1 2 3 chr4 1391052 1391076 (T)n S imple_repeat 1 2 5 chr4 1393373 1393410 A-rich L ow_complexity 1 3 8 chr4 1400570 1400604 (T)n S imple_repeat 1 3 5 chr4 1402734 1402754 (AT)n S imple_repeat 1 2 1 chr4 1404066 1404103 (CAT)n S imple_repeat 1 3 8 chr4 1408915 1408985 (CAACAATAA)n S imple_repeat 1 7 2 chr4 1411015 1411064 (T)n S imple_repeat 1 5 0 chr4 1420576 1420608 A-rich L ow_complexity 1 3 3 chr4 1430911 1430961 (ATTTTTC)n S imple_repeat 1 5 2 chr4 1431785 1431801 (T)n S imple_repeat 1 1 7 chr4 1438297 1438326 (TTCTTA)n S imple_repeat 1 3 1 chr4 1442273 1442299 (A)n S imple_repeat 1 2 7 chr4 1446025 1446063 (ACAA)n S imple_repeat 1 4 0 chr4 1449187 1449214 (CTC)n S imple_repeat 1 2 9 chr4 1449606 1449624 (T)n S imple_repeat 1 1 9 chr4 1454379 1454425 (GTT)n S imple_repeat 1 4 7 chr4 1455058 1455096 (GTT)n S imple_repeat 1 3 9 chr4 1455108 1455152 (TGT)n S imple_repeat 1 4 5 chr4 1456136 1456217 (TCTTTA)n S imple_repeat 1 8 9 chr4 1466567 1466588 (AAT)n S imple_repeat 1 2 2 chr4 1470727 1470761 (AATTAC)n S imple_repeat 1 3 7 chr4 1473777 1473810 A-rich L ow_complexity 1 3 4 chr4 1479644 1479782 A-rich L ow_complexity 1 13 9 chr4 1481296 1481456 (AGGACA)n S imple_repeat 1 16 8 chr4 1489889 1489960 GA-rich L ow_complexity 1 7 5 chr4 1492788 1492913 (GCGCCT)n S imple_repeat 1 13 3 chr4 1493844 1493940 (GCGGTT)n S imple_repeat 1 9 7 chr4 1494379 1494424 (GCT)n S imple_repeat 1 4 9 chr4 1495540 1495589 GA-rich L ow_complexity 1 5 3 chr4 1497060 1497090 (A)n S imple_repeat 1 3 1 chr4 1502296 1502355 A-rich L ow_complexity 1 6 0 chr4 1502957 1502974 (A)n S imple_repeat 1 1 8 chr4 1510532 1510576 (CTG)n S imple_repeat 1 4 5 chr4 1612842 1612887 GA-rich L ow_complexity 1 4 7 chr4 1615515 1615541 (T)n S imple_repeat 1 2 7 chr4 1615897 1615917 (A)n S imple_repeat 1 2 1 chr4 1617620 1617657 (T)n S imple_repeat 1 3 8 chr4 1621020 1621058 (AGTTGC)n S imple_repeat 1 3 9 chr4 1622746 1622777 (GTACTC)n S imple_repeat 1 3 2 chr4 1623666 1623821 L1MEg L INE/L1 (4112) 197 2 1 chr4 1625043 1625066 (A)n S imple_repeat 1 2 4 chr4 1628121 1628164 (TTA)n S imple_repeat 1 4 4 chr4 1628402 1628469 A-rich L ow_complexity 1 7 2 chr4 1635497 1635529 (GATCTG)n S imple_repeat 1 3 3 chr4 1636496 1636520 (T)n S imple_repeat 1 2 5 chr4 1642249 1642331 A-rich L ow_complexity 1 8 4 chr4 1644834 1644896 (TCTTCA)n S imple_repeat 1 7 2 chr4 1650721 1650756 (CTGTGG)n S imple_repeat 1 3 9 chr4 1659240 1659372 GA-rich L ow_complexity 1 13 9 chr4 1671445 1671498 (TTTCAGTTAC)n S imple_repeat 1 5 5 chr4 1677590 1677620 (TCA)n S imple_repeat 1 3 3 chr4 1677903 1678055 (CAT)n S imple_repeat 1 15 5 chr4 1679184 1679251 (TTT)n S imple_repeat 1 6 8 chr4 1684707 1684738 GA-rich L ow_complexity 1 3 3 chr4 1692091 1692120 (TTTTCA)n S imple_repeat 1 3 3 chr4 1692121 1692190 (ATTTCC)n S imple_repeat 1 7 4 chr4 1696983 1697006 (A)n S imple_repeat 1 2 4 chr4 1704164 1704207 GA-rich L ow_complexity 1 4 5 chr4 1704570 1704598 (AATGA)n S imple_repeat 1 2 9 chr4 1705551 1705572 (A)n S imple_repeat 1 2 2 chr4 1713804 1713837 (AGA)n S imple_repeat 1 3 4 chr4 1716740 1716787 A-rich L ow_complexity 1 4 9 chr4 1720700 1720756 A-rich L ow_complexity 1 5 7 chr4 1727240 1727266 (TTTGT)n S imple_repeat 1 2 7 chr4 1733480 1733570 (ATCATC)n S imple_repeat 1 9 4 chr4 1739339 1739390 (TTT)n S imple_repeat 1 5 2 chr4 1744356 1744383 (A)n S imple_repeat 1 2 8 chr4 1746158 1746210 GA-rich L ow_complexity 1 5 3 chr4 1748289 1748327 (TATAT)n S imple_repeat 1 3 9 chr4 1752106 1752168 (TTCCTC)n S imple_repeat 1 6 3 chr4 1757269 1757313 (AAGAGC)n S imple_repeat 1 4 6 chr4 1759259 1759300 (TGTTGTACT)n S imple_repeat 1 4 2 chr4 1763651 1763706 tRNA-Val-GTA t RNA 7 6 1 ( chr4 1764942 1764971 (TTATT)n S imple_repeat 1 3 0 chr4 1768550 1768571 (TCA)n S imple_repeat 1 2 3 chr4 1776527 1776549 (CTT)n S imple_repeat 1 2 3 chr4 1779868 1779908 A-rich L ow_complexity 1 4 1 chr4 1780939 1780975 (GGAAAAAA)n S imple_repeat 1 4 2 chr4 1780941 1780973 (A)n S imple_repeat 1 3 3 chr4 1788715 1788770 (TTCATC)n S imple_repeat 1 5 6 chr4 1788752 1788799 (TCCTC)n S imple_repeat 1 5 0 chr4 1794006 1794046 (TATTTT)n S imple_repeat 1 3 8 chr4 1797414 1797459 (TT)n S imple_repeat 1 4 6 chr4 1807587 1807622 A-rich L ow_complexity 1 3 6 chr4 1808174 1808220 GA-rich L ow_complexity 1 4 7 chr4 1808860 1809272 GA-rich L ow_complexity 1 42 0 chr4 1813668 1813723 GA-rich L ow_complexity 1 5 6 chr4 1814919 1814942 (T)n S imple_repeat 1 2 4 chr4 1821001 1821036 (TTATTTTTT)n S imple_repeat 1 3 7 chr4 1821561 1821591 (TACAT)n S imple_repeat 1 3 1 chr4 1822552 1822581 (GCA)n S imple_repeat 1 3 0 chr4 1823095 1823197 (GCGCAG)n S imple_repeat 1 11 0 chr4 1824447 1824504 (TTTCTTC)n S imple_repeat 1 5 9 chr4 1832541 1832579 (AAAGGAA)n S imple_repeat 1 3 9 chr4 1835307 1835362 A-rich L ow_complexity 1 6 2 chr4 1838970 1839001 (T)n S imple_repeat 1 3 2 chr4 1839503 1839526 (GAA)n S imple_repeat 1 2 4 chr4 1841416 1841437 (T)n S imple_repeat 1 2 2 chr4 1846840 1846882 (TGAAGA)n S imple_repeat 1 4 4 chr4 1846994 1847051 (AAGATG)n S imple_repeat 1 6 2 chr4 1851667 1851687 (T)n S imple_repeat 1 2 1 chr4 1859712 1859738 (TGAAC)n S imple_repeat 1 2 9 chr4 1859746 1859762 (A)n S imple_repeat 1 1 7 chr4 1865623 1865655 (A)n S imple_repeat 1 3 3 chr4 1868214 1868270 A-rich L ow_complexity 1 5 7 chr4 1873077 1873123 (AATGTA)n S imple_repeat 1 4 7 chr4 1879968 1880025 (GATGCA)n S imple_repeat 1 6 4 chr4 1881013 1881074 (CGA)n S imple_repeat 1 6 0 chr4 1884055 1884101 A-rich L ow_complexity 1 4 7 chr4 1896009 1896049 (TTATT)n S imple_repeat 1 4 1 chr4 1899400 1899440 (TTTAT)n S imple_repeat 1 4 1 chr4 1904972 1905035 (CTATAA)n S imple_repeat 1 6 5 chr4 1907584 1907606 (A)n S imple_repeat 1 2 3 chr4 1911420 1911465 (TATAC)n S imple_repeat 1 4 9 chr4 1920450 1920497 (TTC)n S imple_repeat 1 4 9 chr4 1922607 1922651 A-rich L ow_complexity 1 4 5 chr4 1924756 1924802 (AAGATA)n S imple_repeat 1 4 8 chr4 1927318 1927371 A-rich L ow_complexity 1 5 6 chr4 1930948 1930997 A-rich L ow_complexity 1 5 0 chr4 1934012 1934036 (AATA)n S imple_repeat 1 2 5 chr4 1937998 1938056 (ATAA)n S imple_repeat 1 5 9 chr4 1938870 1938916 A-rich L ow_complexity 1 5 1 chr4 1938943 1938981 A-rich L ow_complexity 1 4 2 chr4 1947190 1947229 (TAATTAG)n S imple_repeat 1 4 0 chr4 1947488 1947556 (TTTCCA)n S imple_repeat 1 6 9 chr4 1948745 1948787 (CCCGCAG)n S imple_repeat 1 4 4 chr4 1949115 1949149 (TTGCTG)n S imple_repeat 1 3 5 chr4 1950319 1950368 (AATGCAC)n S imple_repeat 1 5 1 chr4 1957023 1957122 (CTT)n S imple_repeat 1 10 2 chr4 1957704 1957732 (T)n S imple_repeat 1 2 9 chr4 2025863 2025882 (T)n S imple_repeat 1 2 0 chr4 2026179 2026239 (AAT)n S imple_repeat 1 6 1 chr4 2033250 2033289 L2 L INE/L2 (2987) 43 2 contig1 1956 1989 (T)n Simple_repeat 1 34 contig1 2752 2786 (TCATCG)n Simple_repeat 1 35 contig10 1050 1089 (GCG)n Simple_repeat 1 39 contig100 400 436 (CCGCGA)n Simple_repeat 1 37 contig105 1 36 (ACA)n Simple_repeat 1 36 contig105 75 104 (AC)n Simple_repeat 1 31 contig105 158 193 (CAC)n Simple_repeat 1 36 contig106 733 768 (CGCTGC)n Simple_repeat 1 36 contig106 1140 1209 (CGTCGC)n Simple_repeat 1 71 contig108 8 36 (T)n Simple_repeat 1 29 contig110 1634 1669 (CCGCGC)n Simple_repeat 1 36 contig112 703 771 (TCGAGG)n Simple_repeat 1 72 contig112 737 791 (TCGAGC)n Simple_repeat 1 59 contig112 1254 1302 (GGCGCG)n Simple_repeat 1 48 contig114 931 970 (GCCGGC)n Simple_repeat 1 40 contig114 1831 1913 (CGACGG)n Simple_repeat 1 83 contig116 1719 1781 A-rich Low_complexity 1 62 contig116 4062 4192 A-rich Low_complexity 1 126 contig117 368 411 (GTCCGAC)n Simple_repeat 1 45 contig117 690 720 (GGCCCC)n Simple_repeat 1 31 contig12 166 197 (TGT)n Simple_repeat 1 32 contig12 712 769 (AGT)n Simple_repeat 1 60 contig12 3862 3889 (TA)n Simple_repeat 1 28 contig120 1632 1680 (CCCGCA)n Simple_repeat 1 50 contig122 6630 6679 A-rich Low_complexity 1 50 contig122 9306 9352 (ATGA)n Simple_repeat 1 45 contig122 9353 9385 A-rich Low_complexity 5 85 contig122 15225 15265 (GGTAAGT)n Simple_repeat 1 41 contig122 16102 16130 (CTG)n Simple_repeat 1 29 contig122 16264 16300 (CTT)n Simple_repeat 1 36 contig122 18602 18676 A-rich Low_complexity 1 75 contig122 20975 20996 (T)n Simple_repeat 1 22 contig122 23634 23655 (A)n Simple_repeat 1 22 contig122 24014 24040 (GGA)n Simple_repeat 1 27 contig122 25010 25041 (TACTT)n Simple_repeat 1 33 contig122 25151 25184 (ATTAT)n Simple_repeat 1 37 contig122 25993 26027 (T)n Simple_repeat 1 35 contig127 631 671 (GTCGTC)n Simple_repeat 1 41 contig127 974 1003 (GCGGTC)n Simple_repeat 1 31 contig13 321 398 A-rich Low_complexity 1 80 contig13 670 692 (A)n Simple_repeat 1 23 contig13 852 1271 (ATTTTCT)n Simple_repeat 1 419 contig13 4114 4163 (T)n Simple_repeat 1 50 contig13 5907 5942 (TTTCACT)n Simple_repeat 1 38 contig13 6182 6258 (TATTTT)n Simple_repeat 1 79 contig13 8835 8867 (GCCTGC)n Simple_repeat 1 33 contig13 11274 11300 A-rich Low_complexity 1 62 contig13 11301 11335 (AAGA)n Simple_repeat 1 34 contig130 1262 1294 (CGAGCT)n Simple_repeat 1 33 contig132 313 357 (CGTCGCA)n Simple_repeat 1 44 contig14 1321 1342 (T)n Simple_repeat 1 22 contig14 1397 1422 (ATAA)n Simple_repeat 1 26 contig14 3074 3116 (TAA)n Simple_repeat 1 43 contig141 121 142 (CGT)n Simple_repeat 1 22 contig149 1067 1118 (CGT)n Simple_repeat 1 52 contig149 1381 1428 (ACGCCG)n Simple_repeat 1 48 contig15 6504 6535 (AAATAAC)n Simple_repeat 1 32 contig15 7110 7170 A-rich Low_complexity 1 59 contig15 13849 13885 (TTATTT)n Simple_repeat 1 37 contig157 1435 1480 (GGTGCG)n Simple_repeat 1 44 contig159 394 447 (GCGCCCA)n Simple_repeat 1 57 contig160 1389 1430 G-rich Low_complexity 1 42 contig162 73 122 (CGA)n Simple_repeat 1 50 contig167 1 52 (GACGTC)n Simple_repeat 1 52 contig169 1070 1102 G-rich Low_complexity 1 34 contig17 8970 8992 (CAG)n Simple_repeat 1 23 contig172 138 178 (GGCGGT)n Simple_repeat 1 40 contig174 752 782 (CGCTCA)n Simple_repeat 1 31 contig177 298 330 (GCCGC)n Simple_repeat 1 30 contig177 361 417 (GAC)n Simple_repeat 1 58 contig18 531 569 (TATC)n Simple_repeat 1 39 contig18 2099 2182 (AATAAA)n Simple_repeat 1 84 contig18 4391 4407 (T)n Simple_repeat 1 17 contig18 9412 9461 (ATTTGGC)n Simple_repeat 1 55 contig181 61 99 (CGCAC)n Simple_repeat 1 42 contig187 848 880 (CGACGT)n Simple_repeat 1 34 contig19 3048 3082 (CGTCGG)n Simple_repeat 1 36 contig19 9852 9885 (CGT)n Simple_repeat 1 35 contig19 10908 10984 (CGT)n Simple_repeat 1 77 contig191 163 234 (GCGGAC)n Simple_repeat 1 74 contig197 763 816 (ACGTCG)n Simple_repeat 1 56 contig199 568 622 (TCGTCGT)n Simple_repeat 1 53 contig2 7367 7470 (CGTCGAC)n Simple_repeat 1 105 contig2 8365 8417 (GCCGACC)n Simple_repeat 1 52 contig2 15773 15814 (ACGACC)n Simple_repeat 1 42 contig2 22957 23010 (GAC)n Simple_repeat 1 55 contig2 25218 25253 (CGCAC)n Simple_repeat 1 38 contig2 26112 26142 (CGAGCG)n Simple_repeat 1 31 contig20 77 110 (TA)n Simple_repeat 1 35 contig200 1288 1325 (CGC)n Simple_repeat 1 37 contig201 902 957 (CGAGCG)n Simple_repeat 1 52 contig203 720 761 (TGCGCG)n Simple_repeat 1 42 contig203 967 1012 (GCG)n Simple_repeat 1 44 contig204 817 855 (CACCACG)n Simple_repeat 1 41 contig206 1242 1301 (CGTCCG)n Simple_repeat 1 62 contig207 420 452 (GACGGC)n Simple_repeat 1 33 contig21 7981 8019 (GAGGAC)n Simple_repeat 1 39 contig211 1231 1274 (CGAGCG)n Simple_repeat 1 41 contig215 940 1016 (CGCGCT)n Simple_repeat 1 83 contig216 986 1112 (CCG)n Simple_repeat 1 127 contig219 71 120 (CGA)n Simple_repeat 1 50 contig22 1492 1549 (ATCGGC)n Simple_repeat 1 55 contig22 1775 1814 (GTC)n Simple_repeat 1 39 contig22 3580 3625 (ACCGGCC)n Simple_repeat 1 42 contig22 3626 3653 (GACC)n Simple_repeat 2 76 contig22 5255 5294 (CGAGAA)n Simple_repeat 1 40 contig22 7957 8012 (GAC)n Simple_repeat 1 57 contig223 1084 1115 (CGACGG)n Simple_repeat 1 32 contig23 5874 5891 (T)n Simple_repeat 1 18 contig23 6185 6235 (ATTGCTTTA)n Simple_repeat 1 48 contig230 93 122 (CCGTC)n Simple_repeat 1 29 contig231 641 690 (CGT)n Simple_repeat 1 49 contig231 1126 1154 (CCGA)n Simple_repeat 1 27 contig233 206 256 (CACCG)n Simple_repeat 1 51 contig233 619 669 (GCGTCG)n Simple_repeat 1 51 contig234 350 396 (GACCTC)n Simple_repeat 1 44 contig234 381 415 (TCGACG)n Simple_repeat 1 36 contig235 267 322 (CGA)n Simple_repeat 1 57 contig235 306 339 (CAC)n Simple_repeat 1 34 contig236 966 1030 (TCGACG)n Simple_repeat 1 69 contig24 885 951 (TTTT)n Simple_repeat 1 67 contig24 3357 3389 (GGCGCA)n Simple_repeat 1 33 contig24 5981 6059 (AAAAAT)n Simple_repeat 1 79 contig245 584 648 (GTCGCG)n Simple_repeat 1 65 contig247 9 67 (CCGAC)n Simple_repeat 1 56 contig25 4700 4745 tRNA-Arg-AGA tRNA 31 76 contig253 755 789 (CGCGAG)n Simple_repeat 1 32 contig254 709 735 (CGC)n Simple_repeat 1 26 contig256 746 777 (AGCGCG)n Simple_repeat 1 33 contig258 503 547 (TCG)n Simple_repeat 1 45 contig258 849 883 (GCGGTC)n Simple_repeat 1 34 contig26 4869 4892 (TCG)n Simple_repeat 1 24 contig26 5166 5220 (CGT)n Simple_repeat 1 55 contig261 459 495 (CTGCGA)n Simple_repeat 1 37 contig267 746 778 (TTC)n Simple_repeat 1 33 contig267 2332 2372 (T)n Simple_repeat 1 41 contig27 2282 2422 (CATCCTTCA)n Simple_repeat 1 141 contig276 1048 1082 (GCGCGAC)n Simple_repeat 1 37 contig28 4961 4986 (GCGGAC)n Simple_repeat 1 26 contig28 5110 5149 (GACGACA)n Simple_repeat 1 41 contig281 1036 1079 (CGGTCG)n Simple_repeat 1 44 contig283 127 163 (GAGCAC)n Simple_repeat 1 43 contig288 783 836 (GCGCGACC)n Simple_repeat 1 57 contig295 66 105 (ACACCG)n Simple_repeat 1 38 contig299 4 40 (CCCGCGG)n Simple_repeat 1 38 contig299 109 137 (TCC)n Simple_repeat 1 29 contig299 922 953 (TGA)n Simple_repeat 1 32 contig3 4454 4537 GA-rich Low_complexity 1 84 contig3 5475 5503 (T)n Simple_repeat 1 29 contig3 5749 5768 (C)n Simple_repeat 1 20 contig3 6628 6659 (GAG)n Simple_repeat 1 32 contig3 7639 7690 (TTTCACCAC)n Simple_repeat 1 52 contig3 10535 10608 (TAATGA)n Simple_repeat 1 76 contig30 5508 5579 (GACGCC)n Simple_repeat 1 75 contig306 225 250 (TCG)n Simple_repeat 1 25 contig306 337 395 (TCATGC)n Simple_repeat 1 59 contig311 95 160 tRNA-Phe-TTY tRNA (0) 76 contig312 900 942 (GGCAAG)n Simple_repeat 1 43 contig32 3473 3525 (CGACGTG)n Simple_repeat 1 54 contig32 7818 7848 (GCCCTC)n Simple_repeat 1 31 contig322 2189 2251 A-rich Low_complexity 1 61 contig324 1243 1280 (CTCCTC)n Simple_repeat 1 38 contig324 2373 2499 (CATTCAT)n Simple_repeat 1 129 contig324 4934 5006 (CTATTT)n Simple_repeat 1 76 contig324 5187 5235 (TCTCCT)n Simple_repeat 1 48 contig324 5736 5814 (TTC)n Simple_repeat 1 80 contig324 16765 16818 tRNA-Val-GTA tRNA 10 63 contig324 23523 23569 (CTTT)n Simple_repeat 1 48 contig324 26985 27012 (T)n Simple_repeat 1 28 contig324 36140 36159 (A)n Simple_repeat 1 20 contig324 39227 39276 (TCA)n Simple_repeat 1 50 contig324 46919 46956 GA-rich Low_complexity 1 34 contig324 48098 48132 (GCT)n Simple_repeat 1 35 contig324 48182 48206 (CAA)n Simple_repeat 1 25 contig324 57134 57160 A-rich Low_complexity 1 27 contig324 60223 60299 (CAA)n Simple_repeat 1 77 contig324 60265 60315 (CAGCAG)n Simple_repeat 1 51 contig324 66036 66077 (TCTTTT)n Simple_repeat 1 40 contig324 73348 73383 GA-rich Low_complexity 1 39 contig324 73580 73619 (TATAA)n Simple_repeat 1 40 contig324 73701 73761 tRNA-Cys-TGY tRNA (14) 61 contig324 76873 76914 A-rich Low_complexity 1 41 contig324 78106 78137 (TCAACA)n Simple_repeat 1 34 contig324 88323 88362 (T)n Simple_repeat 1 40 contig324 97222 97260 A-rich Low_complexity 1 41 contig324 101056 101082 (ATTTTT)n Simple_repeat 1 27 contig324 107515 107532 (A)n Simple_repeat 1 18 contig324 120972 120999 A-rich Low_complexity 1 28 contig324 126692 126725 (TATA)n Simple_repeat 1 35 contig324 127205 127238 (T)n Simple_repeat 1 34 contig324 129751 129779 (AGC)n Simple_repeat 1 29 contig324 130222 130238 (T)n Simple_repeat 1 17 contig324 130799 130822 (T)n Simple_repeat 1 24 contig324 134500 134526 (TCA)n Simple_repeat 1 27 contig324 138571 138610 (GAT)n Simple_repeat 1 40 contig324 140280 140321 (TTTTC)n Simple_repeat 1 67 contig324 140322 140348 (T)n Simple_repeat 1 27 contig325 1414 1452 G-rich Low_complexity 1 40 contig325 2099 2152 (GTT)n Simple_repeat 1 54 contig326 7635 7670 (CTTG)n Simple_repeat 1 34 contig326 8734 8821 (CAACTT)n Simple_repeat 1 88 contig326 12048 12100 (ATAA)n Simple_repeat 1 51 contig326 17641 17657 (A)n Simple_repeat 1 17 contig326 18389 18417 A-rich Low_complexity 1 29 contig326 19046 19069 (T)n Simple_repeat 1 24 contig326 27672 27765 (TA)n Simple_repeat 1 94 contig329 2955 2983 (ATGAT)n Simple_repeat 1 31 contig329 6674 6721 A-rich Low_complexity 1 45 contig329 18410 18433 (ATG)n Simple_repeat 1 24 contig329 23440 23478 (TTTCTTC)n Simple_repeat 1 38 contig329 31771 31799 (T)n Simple_repeat 1 29 contig33 2634 2663 (TCGT)n Simple_repeat 1 32 contig33 2676 2728 G-rich Low_complexity 1 57 contig330 9860 9942 A-rich Low_complexity 1 80 contig330 11629 11655 (CATAA)n Simple_repeat 1 28 contig330 12583 12604 (A)n Simple_repeat 1 22 contig330 19867 19905 (ATTAA)n Simple_repeat 1 39 contig330 36722 36738 (T)n Simple_repeat 1 17 contig330 49823 49843 (GAA)n Simple_repeat 1 21 contig330 52519 52581 (TCT)n Simple_repeat 1 62 contig330 54514 54551 (TCT)n Simple_repeat 1 37 contig330 58072 58103 (T)n Simple_repeat 1 32 contig330 79921 79974 GA-rich Low_complexity 1 54 contig331 131 166 GA-rich Low_complexity 1 34 contig331 1194 1248 (GCAGCAGAT)n Simple_repeat 1 52 contig331 1264 1334 (GGCGCAG)n Simple_repeat 1 67 contig331 1747 1861 (TTTGTTGCC)n Simple_repeat 1 111 contig331 1908 2001 A-rich Low_complexity 1 97 contig331 3245 3333 GA-rich Low_complexity 1 91 contig331 4205 4227 (CGG)n Simple_repeat 1 22 contig332 8451 8516 tRNA-Leu-TTG tRNA 8 72 contig332 20274 20314 (ATTTTA)n Simple_repeat 1 41 contig332 20872 20908 A-rich Low_complexity 1 33 contig335 38 207 (TCT)n Simple_repeat 1 162 contig335 179 208 (TCCTC)n Simple_repeat 1 30 contig335 2107 2222 (AGCAGC)n Simple_repeat 1 116 contig335 3901 3935 (GCA)n Simple_repeat 1 35 contig335 3936 3964 (CAA)n Simple_repeat 1 29 contig335 3965 3992 (GCA)n Simple_repeat 3 30 contig336 3334 3401 A-rich Low_complexity 1 71 contig337 947 1018 (ATT)n Simple_repeat 1 73 contig338 4002 4046 A-rich Low_complexity 1 45 contig338 10102 10137 (TA)n Simple_repeat 1 37 contig338 10556 10585 (TATT)n Simple_repeat 1 29 contig338 11056 11111 (CAG)n Simple_repeat 1 56 contig338 21919 21949 A-rich Low_complexity 1 31 contig338 22579 22647 (CAG)n Simple_repeat 1 72 contig338 24987 25025 (CTTTGTA)n Simple_repeat 1 39 contig338 25522 25542 (AATA)n Simple_repeat 1 21 contig338 27727 27751 (TATT)n Simple_repeat 1 25 contig338 29051 29138 A-rich Low_complexity 1 84 contig338 29266 29487 (GATAGA)n Simple_repeat 1 224 contig338 30816 30921 (TAC)n Simple_repeat 1 103 contig338 32877 33058 (TCA)n Simple_repeat 1 182 contig338 33311 33497 (CTC)n Simple_repeat 1 187 contig338 34291 34358 (TTTCCT)n Simple_repeat 1 67 contig338 36194 36227 (T)n Simple_repeat 1 34 contig338 38594 38667 A-rich Low_complexity 1 79 contig338 41675 41696 (CTG)n Simple_repeat 1 22 contig341 1103 1149 GA-rich Low_complexity 1 44 contig341 3125 3149 (T)n Simple_repeat 1 25 contig341 6242 6284 GA-rich Low_complexity 1 43 contig341 7937 7960 (T)n Simple_repeat 1 24 contig341 11968 12004 (CTTTTG)n Simple_repeat 1 38 contig341 12334 12385 (TCTTTTCAC)n Simple_repeat 1 52 contig341 13071 13100 (TGC)n Simple_repeat 1 30 contig342 5421 5473 (AATAA)n Simple_repeat 1 51 contig342 5787 5831 (ATAATCT)n Simple_repeat 1 43 contig342 5812 5848 (ATATT)n Simple_repeat 1 41 contig342 5866 5957 (AATAAT)n Simple_repeat 1 85 contig342 6141 6150 (ATAAG)n Simple_repeat 1 84 contig342 6151 6225 (ATAAGAG)n Simple_repeat 1 74 contig343 122 145 (TGC)n Simple_repeat 1 24 contig344 607 635 (T)n Simple_repeat 1 29 contig344 1394 1422 A-rich Low_complexity 1 29 contig345 1339 1412 (TAATGA)n Simple_repeat 1 76 contig346 1392 1441 (TTCTTC)n Simple_repeat 1 48 contig346 4062 4138 (GAAGT)n Simple_repeat 1 73 contig346 6700 6781 A-rich Low_complexity 1 88 contig347 274 327 (AGAATGA)n Simple_repeat 1 53 contig347 325 371 A-rich Low_complexity 1 47 contig347 706 734 (ATCCTCT)n Simple_repeat 1 90 contig347 735 799 (TCC)n Simple_repeat 1 62 contig347 1206 1264 A-rich Low_complexity 1 59 contig347 2319 2371 (T)n Simple_repeat 1 53 contig347 5738 5764 (T)n Simple_repeat 1 27 contig347 10018 10054 (TGATTT)n Simple_repeat 1 36 contig347 11299 11340 (CTTTT)n Simple_repeat 1 43 contig347 11708 11804 (AATA)n Simple_repeat 1 95 contig347 13225 13290 (TTATTC)n Simple_repeat 1 66 contig347 13925 13959 (AATG)n Simple_repeat 1 35 contig347 16300 16329 (T)n Simple_repeat 1 30 contig347 20005 20022 (CAT)n Simple_repeat 1 18 contig348 9426 9454 (T)n Simple_repeat 1 29 contig348 15748 15819 (TTTTT)n Simple_repeat 1 72 contig348 17899 17930 (T)n Simple_repeat 1 32 contig348 18147 18182 A-rich Low_complexity 1 36 contig348 20258 20300 (ATTTTG)n Simple_repeat 1 44 contig348 23654 23701 (GATGAA)n Simple_repeat 1 51 contig348 27883 27977 GA-rich Low_complexity 1 92 contig348 28212 28254 (TGA)n Simple_repeat 1 43 contig348 31873 31911 GA-rich Low_complexity 1 56 contig348 31912 31938 (AG)n Simple_repeat 1 27 contig348 32671 32700 A-rich Low_complexity 1 30 contig348 40640 40670 (AATAAC)n Simple_repeat 1 31 contig348 41833 41852 (A)n Simple_repeat 1 20 contig348 45620 45646 (ATC)n Simple_repeat 1 27 contig350 908 934 (T)n Simple_repeat 1 27 contig351 3229 3282 (TTTT)n Simple_repeat 1 54 contig351 7848 7872 (A)n Simple_repeat 1 25 contig352 315 354 A-rich Low_complexity 1 36 contig352 2461 2510 (AAAACGA)n Simple_repeat 1 47 contig352 2514 2548 (AAAATCAA)n Simple_repeat 1 35 contig352 3100 3136 (CACAGC)n Simple_repeat 1 40 contig352 3625 3692 GA-rich Low_complexity 1 68 contig352 3711 3740 (GGAAGA)n Simple_repeat 1 30 contig352 3993 4048 A-rich Low_complexity 1 53 contig352 4047 4081 (AATA)n Simple_repeat 1 35 contig352 6675 6733 (GTGTTT)n Simple_repeat 1 59 contig352 17790 17829 (ATTTATA)n Simple_repeat 1 39 contig352 18197 18235 (TCA)n Simple_repeat 1 39 contig352 19412 19437 (T)n Simple_repeat 1 26 contig353 638 778 (CATCCTTCA)n Simple_repeat 1 141 contig353 6213 6253 (TT)n Simple_repeat 1 41 contig353 7329 7388 (ATGGA)n Simple_repeat 1 56 contig353 10648 10721 (GTTCAA)n Simple_repeat 1 72 contig353 10686 10763 (ATCCAA)n Simple_repeat 1 72 contig353 13010 13073 (GGCTGC)n Simple_repeat 1 67 contig353 14441 14480 A-rich Low_complexity 1 40 contig353 15448 15475 (ATTGA)n Simple_repeat 1 28 contig353 15661 15715 (AGGAAGC)n Simple_repeat 1 56 contig353 16302 16339 (CTCCTTT)n Simple_repeat 1 37 contig353 16635 16666 (TTTTTA)n Simple_repeat 1 32 contig353 21282 21308 (A)n Simple_repeat 1 27 contig353 24507 24578 tRNA-Gln-CAA tRNA 1 72 contig353 25385 25442 (ATTTTCT)n Simple_repeat 1 58 contig354 342 377 (ATGGAAG)n Simple_repeat 1 36 contig354 6602 6740 (ATTTA)n Simple_repeat 1 133 contig354 7355 7401 (TCC)n Simple_repeat 1 47 contig354 18790 18931 (ACTTCCT)n Simple_repeat 1 142 contig354 19969 20116 (CTTTTC)n Simple_repeat 1 147 contig355 3586 3620 A-rich Low_complexity 1 34 contig356 4884 4920 (GAA)n Simple_repeat 1 37 contig356 7341 7402 (TGC)n Simple_repeat 1 62 contig356 11729 11761 (A)n Simple_repeat 1 33 contig356 16297 16338 (TGAGAA)n Simple_repeat 1 39 contig357 109 160 A-rich Low_complexity 1 50 contig358 1137 1171 (T)n Simple_repeat 1 35 contig358 9138 9175 (T)n Simple_repeat 1 38 contig358 11686 11708 (GACT)n Simple_repeat 1 22 contig358 11729 11763 (T)n Simple_repeat 1 35 contig36 729 791 (GCGATC)n Simple_repeat 1 63 contig36 2361 2448 (CGC)n Simple_repeat 1 84 contig36 3557 3602 (CGCCCC)n Simple_repeat 1 46 contig36 8226 8262 (GCCG)n Simple_repeat 1 35 contig360 2286 2370 (TAATAT)n Simple_repeat 1 91 contig360 4397 4463 tRNA-Val-GTG tRNA 3 70 contig360 7156 7194 (GTTTGTG)n Simple_repeat 1 40 contig360 7757 7801 (TTTTTGA)n Simple_repeat 1 45 contig360 7995 8034 GA-rich Low_complexity 1 37 contig360 17400 17479 (TGTCTG)n Simple_repeat 1 80 contig360 26200 26246 GA-rich Low_complexity 1 44 contig360 28222 28246 (T)n Simple_repeat 1 25 contig361 5 72 tRNA-Gly-GGY tRNA 7 74 contig361 1824 1880 (CTT)n Simple_repeat 1 58 contig361 6207 6267 (TTTCTAT)n Simple_repeat 1 64 contig361 14958 15009 (AGTAA)n Simple_repeat 1 50 contig361 19859 19884 (GAA)n Simple_repeat 1 26 contig364 2309 2370 (GCTGAA)n Simple_repeat 1 62 contig364 3819 3844 (T)n Simple_repeat 1 26 contig364 3845 3864 (ATTTT)n Simple_repeat 2 45 contig364 5300 5406 (AGC)n Simple_repeat 1 107 contig364 6403 6436 (AATA)n Simple_repeat 1 35 contig364 7323 7378 A-rich Low_complexity 1 56 contig364 12775 12804 A-rich Low_complexity 1 30 contig364 17761 17797 (ATTG)n Simple_repeat 1 34 contig364 22037 22075 (ATC)n Simple_repeat 1 39 contig364 22079 22129 (TTCTTG)n Simple_repeat 1 52 contig364 22844 22904 (CTTCCT)n Simple_repeat 1 65 contig364 28431 28472 (GGAAGGT)n Simple_repeat 1 44 contig364 33213 33422 (TCCTCA)n Simple_repeat 1 207 contig364 36128 36188 (ATCATGT)n Simple_repeat 1 68 contig364 37805 37838 (T)n Simple_repeat 1 34 contig364 42103 42119 (T)n Simple_repeat 1 17 contig364 42535 42595 A-rich Low_complexity 1 57 contig364 44578 44604 (A)n Simple_repeat 1 27 contig364 46281 46323 (TAGATATTGC)n Simple_repeat 1 45 contig364 49984 50059 GA-rich Low_complexity 1 75 contig364 53306 53332 (T)n Simple_repeat 1 27 contig364 54452 54471 (T)n Simple_repeat 1 20 contig364 59496 59543 (AATT)n Simple_repeat 1 44 contig364 60101 60193 (GAAGAAGT)n Simple_repeat 1 93 contig365 1 44 (CATTACTT)n Simple_repeat 1 44 contig365 5990 6026 (TTCGTAT)n Simple_repeat 1 37 contig365 17167 17213 GA-rich Low_complexity 1 47 contig365 17534 17610 A-rich Low_complexity 1 72 contig365 19918 19950 A-rich Low_complexity 1 33 contig365 23602 23642 (CTGCTTT)n Simple_repeat 1 41 contig365 24535 24554 (A)n Simple_repeat 1 20 contig365 25139 25174 (AT)n Simple_repeat 1 37 contig365 26333 26352 (A)n Simple_repeat 1 20 contig365 27464 27551 L2 LINE/L2 (2398) 1021 contig365 28407 28436 (TAAATA)n Simple_repeat 1 30 contig365 29858 29923 (ATTCTCC)n Simple_repeat 1 68 contig365 31310 31386 (ATTTTATTC)n Simple_repeat 1 77 contig365 37296 37319 (TCTT)n Simple_repeat 1 26 contig365 39495 39524 (TATTGT)n Simple_repeat 1 32 contig365 39731 39766 (T)n Simple_repeat 1 36 contig365 44417 44469 (CTTTG)n Simple_repeat 1 53 contig365 47426 47595 (TCT)n Simple_repeat 1 162 contig365 47567 47596 (TCCTC)n Simple_repeat 1 30 contig365 49496 49611 (AGCAGC)n Simple_repeat 1 116 contig365 51290 51324 (GCA)n Simple_repeat 1 35 contig365 51325 51353 (CAA)n Simple_repeat 1 29 contig365 51354 51381 (GCA)n Simple_repeat 3 30 contig366 1719 1781 A-rich Low_complexity 1 62 contig366 4062 4192 A-rich Low_complexity 1 126 contig366 16875 16965 AmnL2-1 LINE/L2 (1878) 735 contig366 19566 19584 (TCT)n Simple_repeat 1 19 contig366 20905 20984 (ATTCTGATA)n Simple_repeat 1 89 contig366 21149 21188 (AACAGATG)n Simple_repeat 1 43 contig366 23974 23998 (A)n Simple_repeat 1 25 contig366 26950 27013 A-rich Low_complexity 1 62 contig366 28799 28822 (A)n Simple_repeat 1 24 contig366 40770 40857 A-rich Low_complexity 1 88 contig366 41478 41528 (AATGT)n Simple_repeat 1 50 contig366 43217 43239 (CAC)n Simple_repeat 1 23 contig366 44006 44026 (T)n Simple_repeat 1 21 contig366 48309 48340 (TTTTA)n Simple_repeat 1 34 contig366 53375 53453 (TTTAC)n Simple_repeat 1 83 contig366 53728 53763 (AAT)n Simple_repeat 1 36 contig366 54036 54080 (T)n Simple_repeat 1 45 contig366 56790 56817 (TCC)n Simple_repeat 1 27 contig366 58383 58413 (ACTCGG)n Simple_repeat 1 31 contig366 62780 62820 A-rich Low_complexity 1 41 contig366 65268 65284 (TGC)n Simple_repeat 1 17 contig366 65657 65684 (T)n Simple_repeat 1 28 contig366 65878 65926 A-rich Low_complexity 1 48 contig366 67366 67382 (T)n Simple_repeat 1 17 contig366 70049 70057 (TATTT)n Simple_repeat 1 36 contig366 70058 70085 (T)n Simple_repeat 1 28 contig366 70285 70312 A-rich Low_complexity 1 29 contig366 75322 75355 (CTT)n Simple_repeat 1 34 contig366 77966 77999 A-rich Low_complexity 1 33 contig366 79019 79045 (TGTTA)n Simple_repeat 1 27 contig366 85809 85880 (ATTTTGC)n Simple_repeat 1 73 contig366 88077 88106 (ACA)n Simple_repeat 1 31 contig366 89525 89541 (A)n Simple_repeat 1 17 contig366 97512 97556 (AT)n Simple_repeat 1 46 contig366 102164 102181 (A)n Simple_repeat 1 18 contig366 102235 102278 A-rich Low_complexity 1 46 contig366 103642 103693 (AGC)n Simple_repeat 1 52 contig366 106590 106670 (CTTAGC)n Simple_repeat 1 87 contig366 110188 110221 (CAGCAA)n Simple_repeat 1 34 contig366 114546 114572 (CAT)n Simple_repeat 1 27 contig366 117703 117745 GA-rich Low_complexity 1 43 contig366 128816 128838 (A)n Simple_repeat 1 23 contig366 129836 129987 (TCTTTTT)n Simple_repeat 1 155 contig366 130705 130761 (GGTCGC)n Simple_repeat 1 57 contig366 131426 131453 (CAG)n Simple_repeat 1 28 contig366 132498 132530 (TTCTTT)n Simple_repeat 1 32 contig367 14609 14627 (A)n Simple_repeat 1 19 contig367 15173 15189 (AAC)n Simple_repeat 1 17 contig367 36183 36230 (AATTTTC)n Simple_repeat 1 47 contig367 37430 37466 A-rich Low_complexity 1 37 contig368 2466 2516 (ATAC)n Simple_repeat 1 54 contig368 13371 13414 (AATGAAGT)n Simple_repeat 1 44 contig368 13741 13802 (TCGTCA)n Simple_repeat 1 65 contig368 17421 17453 A-rich Low_complexity 1 33 contig368 23091 23127 (TTTGTT)n Simple_repeat 1 36 contig368 25911 25982 GA-rich Low_complexity 1 71 contig368 26515 26540 (ATTT)n Simple_repeat 1 26 contig368 26665 26751 (TTTCTT)n Simple_repeat 1 84 contig368 39503 39520 (ATG)n Simple_repeat 1 18 contig368 41313 41395 (TTTATCC)n Simple_repeat 1 89 contig369 1001 1030 (TTA)n Simple_repeat 1 29 contig369 2247 2273 (ACAGCA)n Simple_repeat 1 27 contig37 5795 5827 (GGC)n Simple_repeat 1 33 contig370 1821 1963 (AATGA)n Simple_repeat 1 153 contig370 2747 2787 (CGCGGC)n Simple_repeat 1 40 contig370 4559 4614 (AACCTCA)n Simple_repeat 1 56 contig370 6531 6579 (ATCCAA)n Simple_repeat 1 51 contig370 7607 7655 (CTG)n Simple_repeat 1 49 contig370 8076 8105 A-rich Low_complexity 1 30 contig370 8258 8285 (TTTCA)n Simple_repeat 1 28 contig370 8550 8624 A-rich Low_complexity 1 77 contig370 13636 13698 A-rich Low_complexity 1 61 contig372 128 168 (GCGCCA)n Simple_repeat 1 44 contig373 4369 4395 (ATT)n Simple_repeat 1 27 contig375 13390 13447 (TATTGAT)n Simple_repeat 1 64 contig382 4586 4653 (ATTTGT)n Simple_repeat 1 69 contig382 5834 5858 (T)n Simple_repeat 1 25 contig384 181 341 LSU-rRNA_Hsa rRNA 269 431 contig387 5063 5106 (AATAAA)n Simple_repeat 1 45 contig39 1145 1177 A-rich Low_complexity 1 33 contig39 4320 4367 (TGA)n Simple_repeat 1 48 contig39 5558 5565 (AATA)n Simple_repeat 1 16 contig39 5566 5588 (AT)n Simple_repeat 1 23 contig39 5589 5598 (AATA)n Simple_repeat 17 42 contig390 617 648 A-rich Low_complexity 1 33 contig394 580 601 (A)n Simple_repeat 1 22 contig394 3591 3623 (TTG)n Simple_repeat 1 33 contig394 3654 3675 (CTG)n Simple_repeat 1 22 contig394 6654 6700 (ATAA)n Simple_repeat 1 45 contig395 1285 1302 (TTC)n Simple_repeat 1 18 contig4 819 870 (GCACCG)n Simple_repeat 1 50 contig40 1 151 (GATGAT)n Simple_repeat 1 151 contig40 933 979 (AATAA)n Simple_repeat 1 49 contig40 1911 1951 (T)n Simple_repeat 1 41 contig40 4985 5005 (A)n Simple_repeat 1 21 contig41 674 751 (CAG)n Simple_repeat 1 78 contig41 3510 3582 (AT)n Simple_repeat 1 72 contig43 2324 2354 A-rich Low_complexity 1 31 contig45 462 499 (GACCCGC)n Simple_repeat 1 36 contig46 21 64 (TAATC)n Simple_repeat 1 44 contig47 2931 3004 A-rich Low_complexity 1 76 contig48 1272 1379 (TTTATCA)n Simple_repeat 1 111 contig48 3753 3797 (TGGAGG)n Simple_repeat 1 45 contig48 4030 4052 (GGC)n Simple_repeat 1 23 contig49 982 1633 SSU-rRNA_Hsa rRNA 1027 1708 contig49 2101 2135 G-rich Low_complexity 1 36 contig49 2734 2832 LSU-rRNA_Hsa rRNA 317 415 contig49 2987 3140 LSU-rRNA_Hsa rRNA 1504 1658 contig49 4198 5046 LSU-rRNA_Hsa rRNA 3599 4519 contig5 5837 5880 G-rich Low_complexity 1 44 contig5 7248 7293 (GCGACCT)n Simple_repeat 1 47 contig5 14040 14102 (GCCTCG)n Simple_repeat 1 67 contig51 434 484 (CGA)n Simple_repeat 1 50 contig51 731 773 (AGGCG)n Simple_repeat 1 40 contig52 3719 3764 (CCGACGA)n Simple_repeat 1 44 contig53 4621 4704 (TCATTT)n Simple_repeat 1 84 contig53 4705 4730 (TCACTC)n Simple_repeat 1 26 contig53 4781 4820 (CTT)n Simple_repeat 1 40 contig53 4867 4902 (TTCTAT)n Simple_repeat 1 34 contig54 3 66 (AGAATAG)n Simple_repeat 1 67 contig54 113 152 GA-rich Low_complexity 1 40 contig54 203 228 (GAGAGT)n Simple_repeat 1 26 contig6 888 916 (CGT)n Simple_repeat 1 30 contig6 917 942 (CGTCGC)n Simple_repeat 1 53 contig6 10891 10936 (CCGTCG)n Simple_repeat 1 50 contig60 1168 1238 (AGGCTC)n Simple_repeat 1 69 contig61 3072 3121 (CG)n Simple_repeat 1 52 contig61 4012 4072 (CGAGCA)n Simple_repeat 1 62 contig62 1372 1410 (GGCTAC)n Simple_repeat 1 39 contig62 4347 4423 (CGGTCA)n Simple_repeat 1 77 contig68 116 181 tRNA-Thr-ACG tRNA 4 68 contig68 191 213 (T)n Simple_repeat 1 23 contig69 833 879 (ACG)n Simple_repeat 1 48 contig72 137 168 (CGCGCA)n Simple_repeat 1 32 contig72 2117 2148 (CGTCGA)n Simple_repeat 1 31 contig73 870 1004 (TTCTCC)n Simple_repeat 1 138 contig74 325 429 (GCGGAG)n Simple_repeat 1 102 contig76 819 975 A-rich Low_complexity 1 154 contig76 1223 1264 (TTTTCCAA)n Simple_repeat 1 44 contig77 775 817 (GCGCAC)n Simple_repeat 1 47 contig78 1084 1162 (GCCGGA)n Simple_repeat 1 76 contig79 774 808 (CGT)n Simple_repeat 1 35 contig8 849 872 (TAT)n Simple_repeat 1 24 contig8 6031 6069 (TATC)n Simple_repeat 1 39 contig8 7599 7682 (AATAAA)n Simple_repeat 1 84 contig8 9891 9907 (T)n Simple_repeat 1 17 contig8 14912 14961 (ATTTGGC)n Simple_repeat 1 55 contig80 31 63 (CGG)n Simple_repeat 1 32 contig80 1824 1854 (CGACGG)n Simple_repeat 1 31 contig80 2694 2733 (CGCCCT)n Simple_repeat 1 40 contig82 417 491 (AGTATAA)n Simple_repeat 1 80 contig82 1739 1789 (GATTTGT)n Simple_repeat 1 51 contig88 1046 1102 (CTC)n Simple_repeat 1 57 contig89 134 178 (TTCC)n Simple_repeat 1 46 contig9 117 152 (GAC)n Simple_repeat 1 36 contig9 8124 8174 (GCGATCGT)n Simple_repeat 1 51 contig90 41 76 (CGCGGC)n Simple_repeat 1 35 contig93 404 443 (CGG)n Simple_repeat 1 39 contig94 2181 2257 (CGCCGA)n Simple_repeat 1 83 contig95 93 126 (CTCGAC)n Simple_repeat 1 33 contig95 1908 1965 (GC)n Simple_repeat 1 57 contig97 2122 2184 (CGCGAG)n Simple_repeat 1 67 contig98 520 549 (CCGGCC)n Simple_repeat 1 33