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["Supplementary Table S1. Gene sets used for Gene Set Variation Analysis (GSVA) on the longitudinal gene expression have been taken from the epithelial-to-mesenchymal transition RT2 Profiler™ PCR Arrays by QIAGEN"]
[]
["Genes_Up_EMT","Genes_Down_EMT","Differentiation","Morphogenesis","Cell_Growth_Proliferation","Migration","ECM","TF"]
[]
["AHNAK","CAV2","AKT1","CTNNB1","AKT1","CALD1","BMP1","CTNNB1"]
["BMP1","CDH1","BMP1","FOXC2","BMP1","CAV2","BMP7","ESR1"]
["CALD1","DSP","BMP2","JAG1","BMP7","EGFR","CDH1","FOXC2"]
["CAMK2N1","FGFBP1","BMP7","RAC1","CAV2","FN1","CDH2","GSC"]
["CDH2","IL1RN","COL3A1","SMAD2","CTNNB1","ITGB1","COL1A2","NOTCH1"]
["COL1A2","KRT19","COL5A2","SNAI1","EGFR","JAG1","COL3A1","SIP1"]
["COL3A1","MST1R","CTNNB1","SOX10","ERBB3","MSN","COL5A2","SMAD2"]
["COL5A2","NUDT13","DSP","TGFB1","FGFBP1","MST1R","CTNNB1","SNAI2"]
["FN1","OCLN","ERBB3","TGFB2","FOXC2","NODAL","DSC2","SNAI3"]
["FOXC2","PPPDE2","F11R","TGFB3","IGFBP4","PDGFRB","EGFR","SOX10"]
["GNG11","RGS2","FOXC2","TWIST1","ILK","RAC1","ERBB3","STAT3"]
["GSC","SPP1","FZD7","WNT11","JAG1","STAT3","F11R","TCF3"]
["IGFBP4","TFPI2","GSC","WNT5A","MST1R","TGFB1","FN1","TCF4"]
["ITGA5","TSPAN13","JAG1",null,"NODAL","VIM","FOXC2","TWIST1"]
["ITGAV",null,"KRT14",null,"PDGFRB",null,"ILK","ZEB1"]
["MMP2",null,"MST1R",null,"TGFB1",null,"ITGA5","ZEB2"]
["MMP3",null,"NODAL",null,"TGFB2",null,"ITGAV"]
["MMP9",null,"NOTCH1",null,"TGFB3",null,"ITGB1"]
["MSN",null,"PTP4A1",null,"TIMP1",null,"MMP2"]
["SERPINE1",null,"SMAD2",null,"VCAN",null,"MMP3"]
["SNAI1",null,"SNAI1",null,"ZEB1",null,"MMP9"]
["SNAI2",null,"SNAI2",null,null,null,"PTK2"]
["SNAI3",null,"SOX10",null,null,null,"RAC1"]
["SOX10",null,"TGFB2",null,null,null,"SERPINE1"]
["SPARC",null,"TGFB3",null,null,null,"SPP1"]
["STEAP1",null,"TMEFF1",null,null,null,"TGFB1"]
["TCF4",null,"TWIST1",null,null,null,"TGFB2"]
["TIMP1",null,"VCAN",null,null,null,"TIMP1"]
["TMEFF1",null,"WNT11",null,null,null,"VCAN"]
["TMEM132A",null,"WNT5A"]
["TWIST1",null,"WNT5B"]
["VCAN"]
["VIM"]
["VPS13A"]
["WNT5A"]
["WNT5B"]